322 c3snhA_ Probab=97.01   E-value=0.0068  Score=39.62  Aligned_columns=193  Identities=18%

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH-------HCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf             999999974022343121467976999966999884469999999998-------5299379998155647679999999
Q batch____       271 LKEEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFE-------QQGKSVMLAAGDTFRAAAVEQLQVW  343 (497)
Q Consensus       271 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~G~~G~GKTtt~akla~~~~-------~~~~~v~~~~~Dt~r~~a~~ql~~~  343 (497)
                      +.+.|.+.|......-.+.-.   -|++||-+.+||++.+==|.-.--       +...-+-|.-...-          |
T Consensus         7 ~in~LqD~l~~lG~~~~i~LP---qiVVvG~QSsGKSSvlEai~g~~flprg~~TR~p~~i~l~~~~~~----------~   73 (652)
T c3snhA_           7 LVNRLQDAFSAIGQNADLDLP---QIAVVGGQSAGKSSVLENFVGRDFLPRGSGTRRPLVLQLVNATTE----------Y   73 (652)
T ss_dssp             HHHHHHHHHHTTTCCSSSCCC---EEEEEECTTCCHHHHHHHHHTSCCSCSSCCCCSCEEEEEEECSSC----------E
T ss_pred             HHHHHHHHHHHCCCCCCCCCC---CEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC----------C
T ss_conf             999999999872999878898---189988898879999887618742779997126489999857986----------0


Q ss_pred             HHHHCCEEEECCCHHHHHHHHHHHHHHHHH--------------CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf             997488279738835699999999999997--------------799699982886878899999999999999753146
Q batch____       344 GQRNNIPVIAQHTGADSASVIFDAIQAAKA--------------RNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDV  409 (497)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~d~vliDtaGr~~~~~~~~~~l~~~~~~~~~~~~  409 (497)
                      +...-.+-....+-.+....+.+.......              .--++.|||++|.-+.+....     +..++.....
T Consensus        74 ~~~~~~~~~~~~d~~~i~~~i~~~~~~~~~~~s~~~i~l~i~~p~~~~LtlvDLPGl~~~~~~~~-----i~~lv~~yi~  148 (652)
T c3snhA_          74 AEFLHCKGKKFTDFEEVRLEIEAETDRVTKGISPVPINLRVYSPHVLNLTLVDLPGMTKPDIEFQ-----IRDMLMQFVT  148 (652)
T ss_dssp             EECTTTCSCCBCCHHHHHHHHHHHHHHTCCCCCSCCCCCEEEESSSCSEEEEECCCCCCCHHHHH-----HHHHHHHHHH
T ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHH-----HHHHHHHHHC
T ss_conf             78986387542898999999999987641477867279999508976417876789875784789-----9999999826


Q ss_pred             CCCCEEEEEEECC---CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEE--EEECCCCC-CCCC
Q ss_conf             6884089985247---87899999999843078975999656577826999999998589889--99569985-6554
Q batch____       410 EAPHEVMLTIDAS---TGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIR--YIGVGERI-EDLR  481 (497)
Q Consensus       410 ~~~~~~~lv~~a~---~~~~~~~~~~~~~~~~~~~~~i~tk~D~~~~~G~~~~~~~~~~~pi~--~~~~G~~~-~dl~  481 (497)
                      +...-+|.|++|+   ..++++.-+..+.-.-.=+=-|+||+|-..++-.++++..--..|+.  |++.=.+- +|+.
T Consensus       149 ~~~~IILaV~~a~~D~ans~~l~lar~~Dp~g~RTiGVlTK~Dl~~~g~~~~~il~g~~~~L~lGy~~v~nr~~~~~~  226 (652)
T c3snhA_         149 KENCLILAVSPANSDLANSDALKVAKEVDPQGQRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDID  226 (652)
T ss_dssp             STTEEEEEEEETTSCSTTCHHHHHHHHHCSSSSSCCCEEECSTTSCTTCCCHHHHTTCSSCCSSCCEEECCCCCCCSS
T ss_pred             CCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCHHHHH
T ss_conf             988199999627898766589999997197888159984150127660128999639986455770788769968832