43 c1ii0A_ Probab=98.78   E-value=4.5e-07  Score=69.60  Aligned_columns=154  Identities=23%

Q ss_pred             CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC---------------------------HHHHH
Q ss_conf             121467976999966999884469999999998529937999815564---------------------------76799
Q batch____       286 LNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFR---------------------------AAAVE  338 (497)
Q Consensus       286 ~~~~~~~~~~~~~~G~~G~GKTtt~akla~~~~~~~~~v~~~~~Dt~r---------------------------~~a~~  338 (497)
                      +.+...-|++++|.|--||||||+.+-||.++...|+||+||.+|--.                           +-...
T Consensus         1 ~~~~~~~~r~~~~sGKGGvGKTTvaa~lA~~LA~~G~rvLlVd~Dpa~sL~~~lg~~~~~~~~~v~~~~~L~a~eid~~~   80 (550)
T c1ii0A_           1 MQFLQNIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPASNVGQVFSQTIGNTIQAIASVPGLSALEIDPQA   80 (550)
T ss_dssp             CGGGTTCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCCHHHHTTSCCCSSCEECTTSTTEEEEECCHHH
T ss_pred             CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCEECCCCCCCEEEEECHHH
T ss_conf             95222897899995799988899999999999987994999988899880588188676772121476783266656789


Q ss_pred             HHHHHHHHHCCEEEECCCHHHHHHHH-------------HHHHHHHHH-----CCCCEEEECCC----------------
Q ss_conf             99999997488279738835699999-------------999999997-----79969998288----------------
Q batch____       339 QLQVWGQRNNIPVIAQHTGADSASVI-------------FDAIQAAKA-----RNIDVLIADTA----------------  384 (497)
Q Consensus       339 ql~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~-----~~~d~vliDta----------------  384 (497)
                      -++.|-.....++...-.......+.             .+.+.....     ..||+|+|||+                
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ll~~~~~~~~yD~iIvD~aPtg~tlrlL~lp~~~~  160 (550)
T c1ii0A_          81 AAQQYRARIVDPIKGVLPDDVVSSINEQLSGACTTEIAAFDEFTGLLTDASLLTRFDHIIFDTAPTGHTIRLLQLPGAWS  160 (550)
T ss_dssp             HHHHHHHHHHHHHBTTBCHHHHHHHHHHTSSHHHHHHHHHHHHHHHHTCTTHHHHCSEEEESSCCCHHHHHHHHCTHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH
T ss_conf             99999974121022210211023443202782135777589999997312220243279980898778888865477777


Q ss_pred             -----------------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC-----CCCE
Q ss_conf             -----------------687889999999999999975314668840899852478789999999984307-----8975
Q batch____       385 -----------------GRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAV-----GLTG  442 (497)
Q Consensus       385 -----------------Gr~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~a~~~~~~~~~~~~~~~~~-----~~~~  442 (497)
                                       |..........-...|..         +..+-+++=++-..-.+.++.+.+..+     .+++
T Consensus       161 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~d---------~~~t~~~lV~~Pe~~~i~e~~r~~~~L~~~gi~v~~  231 (550)
T c1ii0A_         161 SFIDSNPEGASCLGPMAGLEKQREQYAYAVEALSD---------PKRTRLVLVARLQKSTLQEVARTHLELAAIGLKNQY  231 (550)
T ss_dssp             CCCCCCSSSGGGTGGGGGCCSCHHHHHHHHHHHTC---------TTTEEEEEEECSCHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC---------CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf             76643212566766652000013779999998327---------686569999368354699999999999985998558


Q ss_pred             EEEECC
Q ss_conf             999656
Q batch____       443 ITLTKL  448 (497)
Q Consensus       443 ~i~tk~  448 (497)
                      +|+-|+
T Consensus       232 lVvN~v  237 (550)
T c1ii0A_         232 LVINGV  237 (550)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
T ss_conf             998002