150 c1a1vA_ Probab=97.88   E-value=0.00056  Score=47.36  Aligned_columns=115  Identities=18%

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC---------------CEEEEC
Q ss_conf             67976999966999884469999999998529937999815564767999999999748---------------827973
Q batch____       290 GKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNN---------------IPVIAQ  354 (497)
Q Consensus       290 ~~~~~~~~~~G~~G~GKTtt~akla~~~~~~~~~v~~~~~Dt~r~~a~~ql~~~~~~~~---------------~~~~~~  354 (497)
                      ..+-.+..+++|||+||||   .+-..+...|.+|++++  --|+.+.++.+.+.+.+|               .++...
T Consensus         5 ~~~~q~~il~apTGsGKT~---~~~~~~~~~g~~vlvl~--P~r~La~~~~~~l~~~~g~~~~~~~~~~~~~~~~~I~v~   79 (429)
T c1a1vA_           5 PQSFQVAHLHAPTGSGKST---KVPAAYAAQGYKVLVLN--PSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGSPITYS   79 (429)
T ss_dssp             CSSCEEEEEECCTTSCTTT---HHHHHHHTTTCCEEEEE--SCHHHHHHHHHHHHHHHSCCCEEECSSCEECCCCSEEEE
T ss_pred             CCCCCEEEEECCCCCCHHH---HHHHHHHHCCCEEEEEC--CHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCEEEE
T ss_conf             0019769998589887889---99999997797799984--638998999999997518450122164761479868999


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
Q ss_conf             88356999999999999977996999828868788999999999999997531466884089985247
Q batch____       355 HTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDAS  422 (497)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~d~vliDtaGr~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~a~  422 (497)
                      ..+.=+.....       .+++++|+||=+  ..++.+....+..+.+.....    +...++.++||
T Consensus        80 T~~~ll~~~~~-------l~~~~~VIiDEa--H~~~~~~~~~~~~~~~~~~~~----~~~~~i~~SAT  134 (429)
T c1a1vA_          80 TYGKFLADGGS-------GGAYDIIICDEC--HSTDATSILGIGTVLDQAETA----GARLVVLATAT  134 (429)
T ss_dssp             EHHHHHHTTCC-------CCCCSEEEEETT--TCCSHHHHHHHHHHHHHTTTT----TCSEEEEEESS
T ss_pred             CCCHHHCCCCC-------CCCCCEEEECHH--HCCCCCCCHHHHHHHHHHHCC----CCCEEEEEECC
T ss_conf             71187437420-------267317983045--203422212568888763118----88379998148