Phyre 2 alignment of P25798 with d1pyya1

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Job Description | P25798
Confidence | 15.44% | Date | Thu Jan 5 11:42:39 GMT 2012
Rank | 98 | Aligned Residues | 38
% Identity | 13% | Template | d1pyya1
SCOP info | Penicillin-binding protein 2x (pbp-2x), c-terminal domain | Penicillin-binding protein 2x (pbp-2x), c-terminal domain | Penicillin-binding protein 2x (pbp-2x), c-terminal domain
Resolution | 2.42

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | A | P | D | Y | R | T | L | F | S | N | L | S | D | Q | D | G | G | A | I | V | S | Q | L | T | Q | M | N | I | P | Y | R | F | S | E | A | S | G | A | I | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | S | P | Y | P | M | P | S | V | K | D | I | S | P | G | D | L | . | . | . | A | E | E | L | R | R | N | L | V | Q | P | I | V | V | G | T | G | T | K | I | K
Template Known Secondary structure |  |  |  |  |  | B |  |  |  |  | S | S |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S |  | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 633 | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . |  |  |  | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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