98 c3b9pA_ Probab=89.47   E-value=1.4  Score=22.25  Aligned_columns=104  Identities=24%

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             06993448875999999999999863992453899856552340322699811223327999999999999999999999
Q batch____       986 HLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYK 1065 (1329)
Q Consensus       986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1329)
                      |+|+.|-.|+|||..+++|.-.+       ...++-++.-.+.-..                         +.+++++  
T Consensus        55 ~iLl~GppGtGKT~la~aia~~~-------~~~~~~~~~~~~~~~~-------------------------~~~~~~~--  100 (268)
T c3b9pA_          55 GLLLFGPPGNGKTLLARAVATEC-------SATFLNISAASLTSKY-------------------------VGDGEKL--  100 (268)
T ss_dssp             EEEEESSSSSCHHHHHHHHHHHT-------TCEEEEEESTTTSSSS-------------------------CSCHHHH--
T ss_pred             EEEEECCCCCCHHHHHHHHHHHH-------CCCCEECCCCCCCCCC-------------------------CCCCHHH--
T ss_conf             59998888985768999999983-------8971112345443223-------------------------5822799--


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99994898689999999865520133444444565544444444346976999913552557642676899999999988
Q batch____      1066 LMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKA 1145 (1329)
Q Consensus      1066 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1145 (1329)
                               |...-++...                            +.-.|++|||+-.|+-.....--.....|.+.-
T Consensus       101 ---------i~~~~~~a~~----------------------------~~p~il~iDeid~l~~~~~~~~~~~~~~l~~~~  143 (268)
T c3b9pA_         101 ---------VRALFAVARH----------------------------MQPSIIFIDEVDSLLSEREASRRLKTEFLVEFD  143 (268)
T ss_dssp             ---------HHHHHHHHHH----------------------------TCSEEEEEETGGGTSBCCCCSHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHH----------------------------HCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHC
T ss_conf             ---------9999999987----------------------------389864300068732212442356777865113


Q ss_pred             HHCEEEEEEECCCCC
Q ss_conf             640013667428988
Q batch____      1146 RAAGIHLVLATQRPS 1160 (1329)
Q Consensus      1146 ~~~~~~~~~~~~~~~ 1160 (1329)
                      ...++-+|.+|.++.
T Consensus       144 ~~~~v~vI~ttn~~~  158 (268)
T c3b9pA_         144 GLPRIVVLAATNRPQ  158 (268)
T ss_dssp             HCCCEEEEEEESCGG
T ss_pred             CCCCEEEEEECCCHH
T ss_conf             678879998158845