345 c1s3sA_ Probab=71.56   E-value=5.6  Score=17.47  Aligned_columns=104  Identities=27%

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             06993448875999999999999863992453899856552340322699811223327999999999999999999999
Q batch____       986 HLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYK 1065 (1329)
Q Consensus       986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1329)
                      ++|+.|..|+||+..++++---+       .+.|+.||                                       ..+
T Consensus       218 ~~Ll~Gp~G~GKt~l~~~ia~~~-------~~~~~~i~---------------------------------------~~~  251 (436)
T c1s3sA_         218 GILLYGPPGTGKTLIARAVANET-------GAFFFLIN---------------------------------------GPE  251 (436)
T ss_dssp             EEEEECSTTSSHHHHHHHHHHHH-------TCEEEEEE---------------------------------------HHH
T ss_pred             EEEEECCCCCCHHHHHHHHHHHC-------CCCEEEEE---------------------------------------HHH
T ss_conf             38986799899789999998744-------99589973---------------------------------------068


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHH--------HHHHHHHH
Q ss_conf             9999489868999999986552013344444456554444444434697699991355255764--------26768999
Q batch____      1066 LMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMT--------VGKKVEEL 1137 (1329)
Q Consensus      1066 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 1137 (1329)
                      +++..----.......+..+..                         .-.-||+|||+--|.-.        ...-+...
T Consensus       252 l~~~~~g~~e~~l~~~f~~a~~-------------------------~~p~ii~lDeid~l~~~~~~~~~~~~~~~~~~~  306 (436)
T c1s3sA_         252 IMSKLAGESESNLRKAFEEAEK-------------------------NAPAIIFIDELDAIAPKREKTHGEVERRIVSQL  306 (436)
T ss_dssp             HHTSCTTHHHHHHHHHHHHHHH-------------------------TCSEEEEEETGGGTCCCSSSCCCTTHHHHHHHH
T ss_pred             HCCCCCCHHHHHHHHHHHHHHH-------------------------CCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf             7001001588889999999975-------------------------099489840000321025788745889999999


Q ss_pred             HHHHHHHHHHCEEEEEEECCCCC
Q ss_conf             99999988640013667428988
Q batch____      1138 IARLAQKARAAGIHLVLATQRPS 1160 (1329)
Q Consensus      1138 ~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1329)
                      ...+-..-.--++-+|.+|.+|.
T Consensus       307 ~~~~~~~~~~~~v~vi~tt~~~~  329 (436)
T c1s3sA_         307 LTLMDGLKQRAHVIVMAATNRPN  329 (436)
T ss_dssp             HHHHHHCCGGGCEEEEEEESCGG
T ss_pred             HHHHCCCCCCCCEEEEEECCCHH
T ss_conf             86430222469879998448958