36 c1vliA_ Probab=44.14   E-value=25  Score=16.26  Aligned_columns=113  Identities=12%

Q ss_pred             HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEE
Q ss_conf             99999999877983999985078776411112343333444344433455667871068578640451223478878997
Q batch____        53 IQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLP  132 (230)
Q Consensus        53 i~~l~~~ar~~g~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~l~~~l~~~~~d~vi~  132 (230)
                      ..+|.+.||+.|+..+-+.+                                       +....++..++.+.     +-
T Consensus        81 ~~~L~~~~~~~Gi~f~sTpf---------------------------------------d~~svd~l~~~~v~-----~~  116 (358)
T c1vliA_          81 ILPLLDYCREKQVIFLSTVC---------------------------------------DEGSADLLQSTSPS-----AF  116 (358)
T ss_dssp             HHHHHHHHHHTTCEEECBCC---------------------------------------SHHHHHHHHTTCCS-----CE
T ss_pred             HHHHHHHHHHCCCEEEEEEC---------------------------------------CHHHHHHHHHCCCC-----EE
T ss_conf             99999999975982998347---------------------------------------99999999863998-----69


Q ss_pred             CCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCC--CHHHHHHHHHHHHHHCCC
Q ss_conf             78878431024899999759989999853242078999999996898499960212348--888999999999985094
Q batch____       133 KPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQA--GPKFAQKAALFNIETFFG  209 (230)
Q Consensus       133 K~~~SaF~~t~L~~~L~~~gi~~iii~G~~t~~CV~~Ta~da~~~G~~v~vv~Da~a~~--~~e~~~~a~l~~~~~~~~  209 (230)
                      |-.-+-..+.+|.+.+...|.--++=+|++|-.-|...+.-....|-.-+++--|+++|  ..+..+-..+..++..|+
T Consensus       117 KIaS~el~n~pLL~~~A~~gkPvilSTGmatl~Ei~~Av~~i~~~g~~~i~llhC~s~YP~p~~~~nL~~i~~L~~~f~  195 (358)
T c1vliA_         117 KIASYEINHLPLLKYVARLNRPXIFSTAGAEISDVHEAWRTIRAEGNNQIAIXHCVAKYPAPPEYSNLSVIPXLAAAFP  195 (358)
T ss_dssp             EECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHST
T ss_pred             EECHHHCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHCC
T ss_conf             9841227988999999631897185135468899999999999679984899955888898866737467899997517