159 c3sm3A_ Probab=99.55   E-value=1.9e-13  Score=98.18  Aligned_columns=138  Identities=22%

Q ss_pred             HHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC------CHHHCCCCC
Q ss_conf             98615668977999448866899999984899789998789899999999998729864321121------022201111
Q batch____       102 ALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQS------DWFSALAGQ  175 (277)
Q Consensus       102 ~l~~~~~~~~~vLDlgcGtG~~~~~la~~~~~~~v~gvDis~~~l~~a~~n~~~~~~~~~~~~~~------~~~~~~~~~  175 (277)
                      ++...-+++.+|||+|||+|.++..++++  ..+|+|+|+|+.|++.|+++....+.........      .........
T Consensus         6 ~i~~~l~~~~~VLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (212)
T c3sm3A_           6 IIHNYLQEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDS   83 (212)
T ss_dssp             THHHHCCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTT
T ss_pred             HHHHHCCCCCEEEEECCCCCHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             89995899978999877982899999970--9949999759467578887533310011122222222222222113356


Q ss_pred             CCCEEEECCCCCCHHHHHHCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE-------------------
Q ss_conf             6617986682243245652271203400332025644237899999999986388858999-------------------
Q batch____       176 QFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLL-------------------  236 (277)
Q Consensus       176 ~~d~iv~npp~~~~~~~~~l~~~~~~~~~~al~~~~~g~~~~~~~~~~~~~~L~p~G~l~~-------------------  236 (277)
                      .+|.+++...........                      ....++..+.+.|+|||++++                   
T Consensus        84 ~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~lkpgG~~~i~~~~~~~~~~~~~~~~~~~  141 (212)
T c3sm3A_          84 SFDFAVMQAFLTSVPDPK----------------------ERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHD  141 (212)
T ss_dssp             CEEEEEEESCGGGCCCHH----------------------HHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHH
T ss_pred             CCEEEEEEECCCCCCCHH----------------------HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf             530245440420001024----------------------5666789998408897289999669875203667653200


Q ss_pred             ----------------------EECCCCHHHHHHHHHHCCCEEEEEEEC
Q ss_conf             ----------------------837975899999999759905999806
Q batch____       237 ----------------------EHGWQQGEAVRQAFILAGYHDVETCRD  263 (277)
Q Consensus       237 ----------------------e~~~~~~~~v~~~l~~~Gf~~v~v~~D  263 (277)
                                            .......+++..+|+++||+.+.+...
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~~l~~~GF~~~~~~~~  190 (212)
T c3sm3A_         142 FPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVK  190 (212)
T ss_dssp             HHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred             CCCCCCCCCEEECCCCCCCCCCEECCCCHHHHHHHHHHCCCEEEEEEEE
T ss_conf             0110113302310332344310110579999999999779809999874