BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (281 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q52987 Protein phnJ n=259 Tax=Bacteria RepID=PHNJ_RHIME 461 e-128 UniRef50_B5ELG5 Phosphonate metabolism PhnJ n=2 Tax=Acidithiobac... 367 e-100 UniRef50_Q10V10 Phosphonate metabolism PhnJ n=12 Tax=Bacteria Re... 311 1e-83 UniRef50_C8WJZ1 Phosphonate metabolism PhnJ n=2 Tax=Bacteria Rep... 307 2e-82 UniRef50_Q2JPW0 Phosphonate metabolism protein PhnJ n=1 Tax=Syne... 294 3e-78 UniRef50_Q18H31 Phosphonate metabolism protein PhnJ n=21 Tax=cel... 291 1e-77 UniRef50_A1THI5 Phosphonate metabolism PhnJ n=1 Tax=Mycobacteriu... 249 9e-65 UniRef50_UPI0001C16115 hypothetical protein CRC_03409 n=1 Tax=Cy... 85 2e-15 >UniRef50_Q52987 Protein phnJ n=259 Tax=Bacteria RepID=PHNJ_RHIME Length = 297 Score = 461 bits (1187), Expect = e-128, Method: Compositional matrix adjust. Identities = 214/272 (78%), Positives = 239/272 (87%) Query: 1 MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVI 60 M +L+ YNFAYLDEQTKRMIRRAILKA+AIPGYQVPF REMPMPYGWGTGG+Q+TAS++ Sbjct: 1 MNDLATYNFAYLDEQTKRMIRRAILKAIAIPGYQVPFASREMPMPYGWGTGGVQVTASIL 60 Query: 61 GESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQI 120 G DVLKVIDQGADDTTNAVSIR FF++V V T RT +AT+IQTRHRIPE L E Q Sbjct: 61 GPDDVLKVIDQGADDTTNAVSIRAFFQKVADVAVTTRTTEATIIQTRHRIPEEQLREGQT 120 Query: 121 IIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGR 180 +++QVPIPEPLRF+EPRETETR MHALEEYG+M VKLYEDIAR GHIATTYAYPVKV GR Sbjct: 121 LVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDIARNGHIATTYAYPVKVEGR 180 Query: 181 YVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP 240 YVMDPSP PKFDNPKM M ALQLFGAGREKRIYAVPP+T V SLDF+DHPF VQ++D+P Sbjct: 181 YVMDPSPTPKFDNPKMHMSEALQLFGAGREKRIYAVPPYTEVVSLDFEDHPFEVQKFDKP 240 Query: 241 CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYC 272 CA+CG+ + YLDEVVLDD G RMFVCSDTD+C Sbjct: 241 CALCGAENVYLDEVVLDDKGGRMFVCSDTDHC 272 >UniRef50_B5ELG5 Phosphonate metabolism PhnJ n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELG5_ACIF5 Length = 274 Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust. Identities = 177/270 (65%), Positives = 217/270 (80%), Gaps = 2/270 (0%) Query: 7 YNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVL 66 YNFAYLDE TK+ IRR +LKAVAIPG+Q+PF REMP+PYGWGTGGIQ+TA+VIG D+L Sbjct: 5 YNFAYLDEGTKKKIRRTLLKAVAIPGHQIPFASREMPLPYGWGTGGIQVTAAVIGPEDIL 64 Query: 67 KVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVP 126 KVIDQG+DDTTNAVSIRNFF+ TGV TT T +AT+IQTRHRIPETPL Q++I+QVP Sbjct: 65 KVIDQGSDDTTNAVSIRNFFRSTTGVRTTTSTREATLIQTRHRIPETPLHAGQMLIYQVP 124 Query: 127 IPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPS 186 +PEPL +EPR +ET +HA+ +Y +M +KLY+ I R+G IA Y YPV V+ RY+ S Sbjct: 125 MPEPLFKLEPRVSETIALHAMADYSLMYLKLYDQITRYGRIAIGYEYPVIVHDRYLTSSS 184 Query: 187 PIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPF-TVQQWDEPCAICG 245 PIP +D PKM M PALQLFGAGREKR+YA+PP+TRV LDF D+PF V W +PCA+CG Sbjct: 185 PIPAYDVPKMHMSPALQLFGAGREKRLYAIPPYTRVIPLDFTDYPFDPVNTW-QPCALCG 243 Query: 246 STHSYLDEVVLDDAGNRMFVCSDTDYCRQQ 275 + SY DE+V+DDAGNR F+CSDTD+C + Sbjct: 244 AVESYKDEIVIDDAGNRQFICSDTDFCEHR 273 >UniRef50_Q10V10 Phosphonate metabolism PhnJ n=12 Tax=Bacteria RepID=Q10V10_TRIEI Length = 315 Score = 311 bits (798), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 147/273 (53%), Positives = 197/273 (72%), Gaps = 8/273 (2%) Query: 7 YNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVL 66 Y F +LD K+ IRR++LKAVAIPGYQVP+ REMP+ G+GTGG+Q+T S++G+ DVL Sbjct: 28 YQFGFLDSFAKKEIRRSLLKAVAIPGYQVPYSSREMPIARGFGTGGLQITLSLLGKDDVL 87 Query: 67 KVIDQGADDTTNAVSIRNFFKRVT-GVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQV 125 KVIDQG+D++ NAV+IRNF + GV+ T+ T +AT+IQTRHRIPE PL Q+++ QV Sbjct: 88 KVIDQGSDESVNAVNIRNFISKTCPGVSLTKHTPEATIIQTRHRIPEFPLKLGQVLVLQV 147 Query: 126 PIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDP 185 P P+PL +E E + + MH +Y + VKLYED+ +F I ++ YP ++NG YV+DP Sbjct: 148 PYPDPLVIVEASEAKRKQMHGEGDYARLWVKLYEDMVKFSEITISHRYPTRINGHYVIDP 207 Query: 186 SPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDE------ 239 SPIP+FD PK+ L LFGAGREK+IYAVPPFT + L F+D PF V+ +D+ Sbjct: 208 SPIPRFDVPKLHQSFGLHLFGAGREKKIYAVPPFTDAQPLCFEDIPFRVENFDDVDGRRR 267 Query: 240 PCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYC 272 PC CGST S+LDE LD+ GN ++ CSD+DYC Sbjct: 268 PCHRCGSTTSFLDE-FLDEQGNCIYQCSDSDYC 299 >UniRef50_C8WJZ1 Phosphonate metabolism PhnJ n=2 Tax=Bacteria RepID=C8WJZ1_EGGLE Length = 335 Score = 307 bits (787), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 143/267 (53%), Positives = 192/267 (71%), Gaps = 1/267 (0%) Query: 7 YNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVL 66 YN+A+ DE +KR IRRA++K V+IPGYQVPF REMP+ GWGTGG+Q+T ++IG D L Sbjct: 5 YNYAFFDEASKREIRRALVKGVSIPGYQVPFASREMPIGRGWGTGGLQITLAIIGPDDTL 64 Query: 67 KVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVP 126 KVIDQG+DD+ NAV+I+ T V T+ T+DAT+IQ+RHRIPE PL + QI++ QVP Sbjct: 65 KVIDQGSDDSVNAVNIKKLVVDTTDVEVTDATEDATLIQSRHRIPEHPLDDGQILVLQVP 124 Query: 127 IPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPS 186 PEPLR EP E T+ +HA +Y ++L++ I RF T +PV+V GRYVM PS Sbjct: 125 TPEPLRSFEPSEAATKRLHAEADYTGAWLELFDQIVRFDATTTGADHPVQVFGRYVMAPS 184 Query: 187 PIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWD-EPCAICG 245 PIP+FDN K++ L L GAGREK+IYAVPPFT V+ LDF+D+PF V+ ++ + C +CG Sbjct: 185 PIPRFDNLKLNQARHLTLLGAGREKKIYAVPPFTDVKPLDFEDYPFAVETFEGKRCRLCG 244 Query: 246 STHSYLDEVVLDDAGNRMFVCSDTDYC 272 + YLDE+V + G + C+DT+YC Sbjct: 245 AEGVYLDELVDEATGETYYQCNDTNYC 271 >UniRef50_Q2JPW0 Phosphonate metabolism protein PhnJ n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JPW0_SYNJB Length = 288 Score = 294 bits (752), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 141/274 (51%), Positives = 188/274 (68%), Gaps = 1/274 (0%) Query: 7 YNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVL 66 +++AYLD + KR IRR +LKA+AIPG+QVPF REMP+ GWGTGG+QLT S++G DV+ Sbjct: 5 HSYAYLDLEAKREIRRKVLKALAIPGHQVPFASREMPLARGWGTGGLQLTLSLVGPQDVV 64 Query: 67 KVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVP 126 KVIDQGADD+ NA ++R F +V+G TT T +AT+IQ+RHRIPE L E QI+I QVP Sbjct: 65 KVIDQGADDSVNAANLRRFIAQVSGARTTTDTLEATLIQSRHRIPEERLQEGQILILQVP 124 Query: 127 IPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPS 186 IPEPLR++EP + R +HAL +Y ++ V L+E+ R G AYPV V+GRY MDPS Sbjct: 125 IPEPLRYVEPSDARARELHALGDYSLLWVDLFEEHLRHGQSRKGAAYPVLVHGRYGMDPS 184 Query: 187 PIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGS 246 P+P++D PK+ + + LFGAGREKR+YAVPP+TRVE L F D PF + C G Sbjct: 185 PLPRWDLPKLHLAAHITLFGAGREKRLYAVPPYTRVEPLAFVDRPFQPEPILGSCRRSGC 244 Query: 247 THSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKN 280 H +L+ + +D G+ + SD Y + K Sbjct: 245 RHVFLNAIPQED-GSLAYEISDQGYMEKLLAGKT 277 >UniRef50_Q18H31 Phosphonate metabolism protein PhnJ n=21 Tax=cellular organisms RepID=Q18H31_HALWD Length = 372 Score = 291 bits (746), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 141/277 (50%), Positives = 188/277 (67%), Gaps = 4/277 (1%) Query: 3 NLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGE 62 +LSGYN+AYLDE TKR +RR+I+KA++IPG+QVP+ R MP+ GWGTGGIQ + S++G Sbjct: 64 SLSGYNYAYLDEHTKREVRRSIIKAISIPGHQVPYASRPMPLARGWGTGGIQASLSLLGP 123 Query: 63 SDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIII 122 D KVIDQG+D++ NA +IR V TT T +A +IQTRHRIPE LT++QI++ Sbjct: 124 DDTFKVIDQGSDESVNAANIRRLASNTADVETTTDTTNADIIQTRHRIPEEVLTDEQILV 183 Query: 123 FQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYV 182 QVP+ +PLR ++ + R HA YG M V LYE++ +G I YP V GRY+ Sbjct: 184 LQVPVTDPLRKVDGSDAANRRRHAHRNYGKMWVHLYENVVEWGEINIAARYPTMVAGRYL 243 Query: 183 MDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQW-DEPC 241 MDPSPIP++D PK+D +L +F AGRE RIYAVPP T VE L F+D F V+++ C Sbjct: 244 MDPSPIPRWDVPKLDHADSLFIFAAGREARIYAVPPHTSVEPLAFEDRTFQVERFPGVSC 303 Query: 242 AICGSTHSYLDEVVLDDAGNRMFVCSDTDYC--RQQS 276 CGST +YL EV DD G+ + C+D +C RQQ+ Sbjct: 304 HACGSTDTYLTEVETDD-GSVYYSCNDASFCHKRQQN 339 >UniRef50_A1THI5 Phosphonate metabolism PhnJ n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1THI5_MYCVP Length = 293 Score = 249 bits (635), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 124/270 (45%), Positives = 168/270 (62%), Gaps = 3/270 (1%) Query: 9 FAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKV 68 +AYLDE TKR +RRAILKA+AIPG+QVPF REMP+ GWG+GG+Q+T S++G +D +KV Sbjct: 22 YAYLDEDTKRNVRRAILKALAIPGWQVPFASREMPVARGWGSGGLQVTLSLVGPADTVKV 81 Query: 69 IDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIP 128 IDQG D + NA +R +T T AT+IQ+RHRIPE L DQ+++ QVP P Sbjct: 82 IDQGDDMSVNAAGMRKLISTSARCESTTSTAAATIIQSRHRIPEIDLRPDQLLVLQVPHP 141 Query: 129 EPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPI 188 EPLR + P + HA +Y + LY+ AR G T +PV V G +M PSPI Sbjct: 142 EPLRRVVPDDIAALAAHAERDYTAAWLDLYDAQARLGGPRTGADHPVLVAGARLMSPSPI 201 Query: 189 PKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTH 248 P++D ++D P L GAGR R+ A+PP+T V+ L FDD + + PC +CGST Sbjct: 202 PRYDVLRLDRRPHPILLGAGRRARLTALPPYTTVQPLAFDDIALDPEDAEAPCWLCGSTT 261 Query: 249 SYLDEVVLDD-AGNRMFVCSDTDYCRQQSE 277 SY V D + ++++ CSD D C + E Sbjct: 262 SY--RVPTDGPSASQVWCCSDADACHSRRE 289 >UniRef50_UPI0001C16115 hypothetical protein CRC_03409 n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=UPI0001C16115 Length = 100 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 37/63 (58%), Positives = 51/63 (80%), Gaps = 3/63 (4%) Query: 212 RIY---AVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSD 268 RIY A P +RV+SLDF+D+PF V++W+ C +CGST S+LDEV++DD G+RM++CSD Sbjct: 34 RIYDDQAKVPHSRVKSLDFEDYPFGVERWNHACELCGSTESFLDEVLVDDLGSRMWICSD 93 Query: 269 TDY 271 TDY Sbjct: 94 TDY 96 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q52987 Protein phnJ n=259 Tax=Bacteria RepID=PHNJ_RHIME 479 e-134 UniRef50_Q2JPW0 Phosphonate metabolism protein PhnJ n=1 Tax=Syne... 445 e-124 UniRef50_C8WJZ1 Phosphonate metabolism PhnJ n=2 Tax=Bacteria Rep... 444 e-123 UniRef50_Q18H31 Phosphonate metabolism protein PhnJ n=21 Tax=cel... 442 e-123 UniRef50_Q10V10 Phosphonate metabolism PhnJ n=12 Tax=Bacteria Re... 441 e-122 UniRef50_B5ELG5 Phosphonate metabolism PhnJ n=2 Tax=Acidithiobac... 434 e-120 UniRef50_A1THI5 Phosphonate metabolism PhnJ n=1 Tax=Mycobacteriu... 404 e-111 UniRef50_UPI0001C16115 hypothetical protein CRC_03409 n=1 Tax=Cy... 103 9e-21 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_Q52987 Protein phnJ n=259 Tax=Bacteria RepID=PHNJ_RHIME Length = 297 Score = 479 bits (1233), Expect = e-134, Method: Composition-based stats. Identities = 214/277 (77%), Positives = 240/277 (86%) Query: 1 MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVI 60 M +L+ YNFAYLDEQTKRMIRRAILKA+AIPGYQVPF REMPMPYGWGTGG+Q+TAS++ Sbjct: 1 MNDLATYNFAYLDEQTKRMIRRAILKAIAIPGYQVPFASREMPMPYGWGTGGVQVTASIL 60 Query: 61 GESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQI 120 G DVLKVIDQGADDTTNAVSIR FF++V V T RT +AT+IQTRHRIPE L E Q Sbjct: 61 GPDDVLKVIDQGADDTTNAVSIRAFFQKVADVAVTTRTTEATIIQTRHRIPEEQLREGQT 120 Query: 121 IIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGR 180 +++QVPIPEPLRF+EPRETETR MHALEEYG+M VKLYEDIAR GHIATTYAYPVKV GR Sbjct: 121 LVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDIARNGHIATTYAYPVKVEGR 180 Query: 181 YVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP 240 YVMDPSP PKFDNPKM M ALQLFGAGREKRIYAVPP+T V SLDF+DHPF VQ++D+P Sbjct: 181 YVMDPSPTPKFDNPKMHMSEALQLFGAGREKRIYAVPPYTEVVSLDFEDHPFEVQKFDKP 240 Query: 241 CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSE 277 CA+CG+ + YLDEVVLDD G RMFVCSDTD+C + Sbjct: 241 CALCGAENVYLDEVVLDDKGGRMFVCSDTDHCEDRRA 277 >UniRef50_Q2JPW0 Phosphonate metabolism protein PhnJ n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JPW0_SYNJB Length = 288 Score = 445 bits (1146), Expect = e-124, Method: Composition-based stats. Identities = 141/274 (51%), Positives = 188/274 (68%), Gaps = 1/274 (0%) Query: 7 YNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVL 66 +++AYLD + KR IRR +LKA+AIPG+QVPF REMP+ GWGTGG+QLT S++G DV+ Sbjct: 5 HSYAYLDLEAKREIRRKVLKALAIPGHQVPFASREMPLARGWGTGGLQLTLSLVGPQDVV 64 Query: 67 KVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVP 126 KVIDQGADD+ NA ++R F +V+G TT T +AT+IQ+RHRIPE L E QI+I QVP Sbjct: 65 KVIDQGADDSVNAANLRRFIAQVSGARTTTDTLEATLIQSRHRIPEERLQEGQILILQVP 124 Query: 127 IPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPS 186 IPEPLR++EP + R +HAL +Y ++ V L+E+ R G AYPV V+GRY MDPS Sbjct: 125 IPEPLRYVEPSDARARELHALGDYSLLWVDLFEEHLRHGQSRKGAAYPVLVHGRYGMDPS 184 Query: 187 PIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGS 246 P+P++D PK+ + + LFGAGREKR+YAVPP+TRVE L F D PF + C G Sbjct: 185 PLPRWDLPKLHLAAHITLFGAGREKRLYAVPPYTRVEPLAFVDRPFQPEPILGSCRRSGC 244 Query: 247 THSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKN 280 H +L+ + +D G+ + SD Y + K Sbjct: 245 RHVFLNAIPQED-GSLAYEISDQGYMEKLLAGKT 277 >UniRef50_C8WJZ1 Phosphonate metabolism PhnJ n=2 Tax=Bacteria RepID=C8WJZ1_EGGLE Length = 335 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 143/267 (53%), Positives = 192/267 (71%), Gaps = 1/267 (0%) Query: 7 YNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVL 66 YN+A+ DE +KR IRRA++K V+IPGYQVPF REMP+ GWGTGG+Q+T ++IG D L Sbjct: 5 YNYAFFDEASKREIRRALVKGVSIPGYQVPFASREMPIGRGWGTGGLQITLAIIGPDDTL 64 Query: 67 KVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVP 126 KVIDQG+DD+ NAV+I+ T V T+ T+DAT+IQ+RHRIPE PL + QI++ QVP Sbjct: 65 KVIDQGSDDSVNAVNIKKLVVDTTDVEVTDATEDATLIQSRHRIPEHPLDDGQILVLQVP 124 Query: 127 IPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPS 186 PEPLR EP E T+ +HA +Y ++L++ I RF T +PV+V GRYVM PS Sbjct: 125 TPEPLRSFEPSEAATKRLHAEADYTGAWLELFDQIVRFDATTTGADHPVQVFGRYVMAPS 184 Query: 187 PIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWD-EPCAICG 245 PIP+FDN K++ L L GAGREK+IYAVPPFT V+ LDF+D+PF V+ ++ + C +CG Sbjct: 185 PIPRFDNLKLNQARHLTLLGAGREKKIYAVPPFTDVKPLDFEDYPFAVETFEGKRCRLCG 244 Query: 246 STHSYLDEVVLDDAGNRMFVCSDTDYC 272 + YLDE+V + G + C+DT+YC Sbjct: 245 AEGVYLDELVDEATGETYYQCNDTNYC 271 >UniRef50_Q18H31 Phosphonate metabolism protein PhnJ n=21 Tax=cellular organisms RepID=Q18H31_HALWD Length = 372 Score = 442 bits (1136), Expect = e-123, Method: Composition-based stats. Identities = 138/277 (49%), Positives = 187/277 (67%), Gaps = 2/277 (0%) Query: 2 ANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIG 61 +LSGYN+AYLDE TKR +RR+I+KA++IPG+QVP+ R MP+ GWGTGGIQ + S++G Sbjct: 63 DSLSGYNYAYLDEHTKREVRRSIIKAISIPGHQVPYASRPMPLARGWGTGGIQASLSLLG 122 Query: 62 ESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQII 121 D KVIDQG+D++ NA +IR V TT T +A +IQTRHRIPE LT++QI+ Sbjct: 123 PDDTFKVIDQGSDESVNAANIRRLASNTADVETTTDTTNADIIQTRHRIPEEVLTDEQIL 182 Query: 122 IFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRY 181 + QVP+ +PLR ++ + R HA YG M V LYE++ +G I YP V GRY Sbjct: 183 VLQVPVTDPLRKVDGSDAANRRRHAHRNYGKMWVHLYENVVEWGEINIAARYPTMVAGRY 242 Query: 182 VMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQW-DEP 240 +MDPSPIP++D PK+D +L +F AGRE RIYAVPP T VE L F+D F V+++ Sbjct: 243 LMDPSPIPRWDVPKLDHADSLFIFAAGREARIYAVPPHTSVEPLAFEDRTFQVERFPGVS 302 Query: 241 CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSE 277 C CGST +YL EV DD G+ + C+D +C ++ + Sbjct: 303 CHACGSTDTYLTEVETDD-GSVYYSCNDASFCHKRQQ 338 >UniRef50_Q10V10 Phosphonate metabolism PhnJ n=12 Tax=Bacteria RepID=Q10V10_TRIEI Length = 315 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 147/274 (53%), Positives = 197/274 (71%), Gaps = 8/274 (2%) Query: 6 GYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDV 65 Y F +LD K+ IRR++LKAVAIPGYQVP+ REMP+ G+GTGG+Q+T S++G+ DV Sbjct: 27 TYQFGFLDSFAKKEIRRSLLKAVAIPGYQVPYSSREMPIARGFGTGGLQITLSLLGKDDV 86 Query: 66 LKVIDQGADDTTNAVSIRNFFKRVT-GVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQ 124 LKVIDQG+D++ NAV+IRNF + GV+ T+ T +AT+IQTRHRIPE PL Q+++ Q Sbjct: 87 LKVIDQGSDESVNAVNIRNFISKTCPGVSLTKHTPEATIIQTRHRIPEFPLKLGQVLVLQ 146 Query: 125 VPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMD 184 VP P+PL +E E + + MH +Y + VKLYED+ +F I ++ YP ++NG YV+D Sbjct: 147 VPYPDPLVIVEASEAKRKQMHGEGDYARLWVKLYEDMVKFSEITISHRYPTRINGHYVID 206 Query: 185 PSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDE----- 239 PSPIP+FD PK+ L LFGAGREK+IYAVPPFT + L F+D PF V+ +D+ Sbjct: 207 PSPIPRFDVPKLHQSFGLHLFGAGREKKIYAVPPFTDAQPLCFEDIPFRVENFDDVDGRR 266 Query: 240 -PCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYC 272 PC CGST S+LDE LD+ GN ++ CSD+DYC Sbjct: 267 RPCHRCGSTTSFLDE-FLDEQGNCIYQCSDSDYC 299 >UniRef50_B5ELG5 Phosphonate metabolism PhnJ n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELG5_ACIF5 Length = 274 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 175/270 (64%), Positives = 215/270 (79%) Query: 7 YNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVL 66 YNFAYLDE TK+ IRR +LKAVAIPG+Q+PF REMP+PYGWGTGGIQ+TA+VIG D+L Sbjct: 5 YNFAYLDEGTKKKIRRTLLKAVAIPGHQIPFASREMPLPYGWGTGGIQVTAAVIGPEDIL 64 Query: 67 KVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVP 126 KVIDQG+DDTTNAVSIRNFF+ TGV TT T +AT+IQTRHRIPETPL Q++I+QVP Sbjct: 65 KVIDQGSDDTTNAVSIRNFFRSTTGVRTTTSTREATLIQTRHRIPETPLHAGQMLIYQVP 124 Query: 127 IPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPS 186 +PEPL +EPR +ET +HA+ +Y +M +KLY+ I R+G IA Y YPV V+ RY+ S Sbjct: 125 MPEPLFKLEPRVSETIALHAMADYSLMYLKLYDQITRYGRIAIGYEYPVIVHDRYLTSSS 184 Query: 187 PIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGS 246 PIP +D PKM M PALQLFGAGREKR+YA+PP+TRV LDF D+PF +PCA+CG+ Sbjct: 185 PIPAYDVPKMHMSPALQLFGAGREKRLYAIPPYTRVIPLDFTDYPFDPVNTWQPCALCGA 244 Query: 247 THSYLDEVVLDDAGNRMFVCSDTDYCRQQS 276 SY DE+V+DDAGNR F+CSDTD+C + Sbjct: 245 VESYKDEIVIDDAGNRQFICSDTDFCEHRR 274 >UniRef50_A1THI5 Phosphonate metabolism PhnJ n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1THI5_MYCVP Length = 293 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 124/270 (45%), Positives = 168/270 (62%), Gaps = 3/270 (1%) Query: 9 FAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKV 68 +AYLDE TKR +RRAILKA+AIPG+QVPF REMP+ GWG+GG+Q+T S++G +D +KV Sbjct: 22 YAYLDEDTKRNVRRAILKALAIPGWQVPFASREMPVARGWGSGGLQVTLSLVGPADTVKV 81 Query: 69 IDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIP 128 IDQG D + NA +R +T T AT+IQ+RHRIPE L DQ+++ QVP P Sbjct: 82 IDQGDDMSVNAAGMRKLISTSARCESTTSTAAATIIQSRHRIPEIDLRPDQLLVLQVPHP 141 Query: 129 EPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPI 188 EPLR + P + HA +Y + LY+ AR G T +PV V G +M PSPI Sbjct: 142 EPLRRVVPDDIAALAAHAERDYTAAWLDLYDAQARLGGPRTGADHPVLVAGARLMSPSPI 201 Query: 189 PKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTH 248 P++D ++D P L GAGR R+ A+PP+T V+ L FDD + + PC +CGST Sbjct: 202 PRYDVLRLDRRPHPILLGAGRRARLTALPPYTTVQPLAFDDIALDPEDAEAPCWLCGSTT 261 Query: 249 SYLDEVVLDD-AGNRMFVCSDTDYCRQQSE 277 SY V D + ++++ CSD D C + E Sbjct: 262 SY--RVPTDGPSASQVWCCSDADACHSRRE 289 >UniRef50_UPI0001C16115 hypothetical protein CRC_03409 n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=UPI0001C16115 Length = 100 Score = 103 bits (256), Expect = 9e-21, Method: Composition-based stats. Identities = 37/63 (58%), Positives = 51/63 (80%), Gaps = 3/63 (4%) Query: 212 RIY---AVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSD 268 RIY A P +RV+SLDF+D+PF V++W+ C +CGST S+LDEV++DD G+RM++CSD Sbjct: 34 RIYDDQAKVPHSRVKSLDFEDYPFGVERWNHACELCGSTESFLDEVLVDDLGSRMWICSD 93 Query: 269 TDY 271 TDY Sbjct: 94 TDY 96 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.140 0.412 Lambda K H 0.267 0.0426 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,214,505,341 Number of Sequences: 3077464 Number of extensions: 53897911 Number of successful extensions: 127047 Number of sequences better than 1.0e-01: 8 Number of HSP's better than 0.1 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127017 Number of HSP's gapped (non-prelim): 16 length of query: 281 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 154 effective length of database: 649,558,428 effective search space: 100031997912 effective search space used: 100031997912 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 92 (40.0 bits)