BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (198 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A8FY28 Ribonuclease HII n=14 Tax=Bacteria RepID=RNH2_SHESH 243 3e-63 UniRef50_B1YS60 Ribonuclease HII n=13 Tax=cellular organisms Rep... 216 4e-55 UniRef50_C0EQ70 Ribonuclease n=2 Tax=Neisseria flavescens RepID=... 213 3e-54 UniRef50_A1TN83 Ribonuclease HII n=11 Tax=Proteobacteria RepID=R... 213 4e-54 UniRef50_A3NAT3 Ribonuclease HII n=37 Tax=Bacteria RepID=RNH2_BURP6 207 1e-52 UniRef50_B2T5I0 Ribonuclease HII n=16 Tax=Proteobacteria RepID=R... 206 3e-52 UniRef50_Q0AEI5 Ribonuclease HII n=2 Tax=Nitrosomonas RepID=RNH2... 195 8e-49 UniRef50_B9ZNV1 Ribonuclease n=1 Tax=Thioalkalivibrio sp. K90mix... 193 2e-48 UniRef50_A8SF05 Ribonuclease n=1 Tax=Faecalibacterium prausnitzi... 192 5e-48 UniRef50_Q7VRD2 Ribonuclease HII n=1 Tax=Candidatus Blochmannia ... 187 2e-46 UniRef50_A4J661 Ribonuclease HII n=2 Tax=Clostridia RepID=RNH2_D... 186 4e-46 UniRef50_B0SZF7 Ribonuclease HII n=6 Tax=Caulobacteraceae RepID=... 183 3e-45 UniRef50_C8W5A6 Ribonuclease n=3 Tax=Bacteria RepID=C8W5A6_DESAS 182 6e-45 UniRef50_Q0AMK3 Ribonuclease HII n=3 Tax=Proteobacteria RepID=RN... 182 8e-45 UniRef50_Q18BC9 Ribonuclease HII n=15 Tax=Bacteria RepID=RNH2_CLOD6 179 4e-44 UniRef50_B8FRK8 Ribonuclease HII n=5 Tax=Bacteria RepID=RNH2_DESHD 178 7e-44 UniRef50_A7HQZ3 Ribonuclease HII n=43 Tax=Bacteria RepID=RNH2_PARL1 178 9e-44 UniRef50_A7H722 Ribonuclease HII n=9 Tax=Bacteria RepID=RNH2_ANADF 176 3e-43 UniRef50_A9KLL7 Ribonuclease HII n=39 Tax=Bacteria RepID=RNH2_CLOPH 176 5e-43 UniRef50_B5W7X5 Ribonuclease n=2 Tax=Arthrospira RepID=B5W7X5_SPIMA 175 8e-43 UniRef50_A0NVD9 Ribonuclease n=2 Tax=Rhodobacteraceae RepID=A0NV... 174 1e-42 UniRef50_C5NXH7 Ribonuclease n=1 Tax=Gemella haemolysans ATCC 10... 174 1e-42 UniRef50_A6NUN5 Ribonuclease n=1 Tax=Bacteroides capillosus ATCC... 173 3e-42 UniRef50_Q2P4B9 Ribonuclease HII n=19 Tax=cellular organisms Rep... 173 3e-42 UniRef50_D0L036 Ribonuclease n=1 Tax=Halothiobacillus neapolitan... 172 5e-42 UniRef50_Q1GD84 Ribonuclease HII n=22 Tax=Alphaproteobacteria Re... 172 6e-42 UniRef50_A6GPG3 Ribonuclease n=1 Tax=Limnobacter sp. MED105 RepI... 172 7e-42 UniRef50_B5YFD2 Ribonuclease n=2 Tax=Dictyoglomus RepID=B5YFD2_D... 171 1e-41 UniRef50_Q5FFD4 Ribonuclease HII n=5 Tax=Rickettsiales RepID=RNH... 171 2e-41 UniRef50_Q4FPF7 Ribonuclease HII n=3 Tax=Bacteria RepID=RNH2_PELUB 169 6e-41 UniRef50_C6QIW2 Ribonuclease n=1 Tax=Hyphomicrobium denitrifican... 168 1e-40 UniRef50_Q73G60 Ribonuclease HII n=9 Tax=Rickettsiales RepID=RNH... 166 4e-40 UniRef50_A8VRY1 Ribonuclease n=1 Tax=Bacillus selenitireducens M... 166 4e-40 UniRef50_Q024M2 Ribonuclease HII n=1 Tax=Candidatus Solibacter u... 166 5e-40 UniRef50_UPI00017443D3 Ribonuclease H n=1 Tax=Verrucomicrobium s... 166 5e-40 UniRef50_C5D8U9 Ribonuclease HII n=118 Tax=Bacteria RepID=RNH2_G... 165 8e-40 UniRef50_C3MHC0 Ribonuclease HII n=12 Tax=Alphaproteobacteria Re... 164 1e-39 UniRef50_A0LV66 Ribonuclease HII n=41 Tax=Actinomycetales RepID=... 164 1e-39 UniRef50_B0K1U0 Ribonuclease n=12 Tax=Bacteria RepID=B0K1U0_THEPX 164 2e-39 UniRef50_Q6MDG7 Ribonuclease HII n=11 Tax=Chlamydiales RepID=RNH... 163 3e-39 UniRef50_D1BMP6 Ribonuclease n=3 Tax=Veillonella RepID=D1BMP6_VEIPT 163 4e-39 UniRef50_Q0AWX1 Ribonuclease HII n=1 Tax=Syntrophomonas wolfei s... 162 5e-39 UniRef50_A3DDG7 Ribonuclease HII n=6 Tax=Bacteria RepID=RNH2_CLOTH 162 6e-39 UniRef50_Q043R9 Ribonuclease HII n=22 Tax=Firmicutes RepID=RNH2_... 162 6e-39 UniRef50_Q2S009 Ribonuclease HII n=1 Tax=Salinibacter ruber DSM ... 162 6e-39 UniRef50_D0NJ61 Ribonuclease n=1 Tax=Phytophthora infestans T30-... 161 1e-38 UniRef50_Q03S83 Ribonuclease HII n=39 Tax=Lactobacillaceae RepID... 161 1e-38 UniRef50_A5D1I3 Ribonuclease HII n=4 Tax=Bacteria RepID=RNH2_PELTS 161 1e-38 UniRef50_Q3AP34 Ribonuclease HII n=7 Tax=Chlorobiaceae RepID=RNH... 161 1e-38 UniRef50_Q2B7D6 Ribonuclease n=1 Tax=Bacillus sp. NRRL B-14911 R... 160 2e-38 UniRef50_B1GZ18 Ribonuclease HII n=11 Tax=Bacteria RepID=RNH2_UNCTG 160 2e-38 UniRef50_Q1JGT2 Ribonuclease HII n=78 Tax=Firmicutes RepID=RNH2_... 160 2e-38 UniRef50_Q2GD69 Ribonuclease HII n=2 Tax=Neorickettsia RepID=RNH... 160 2e-38 UniRef50_C0GQX3 Ribonuclease n=1 Tax=Desulfonatronospira thiodis... 160 3e-38 UniRef50_D1C7S7 Ribonuclease n=1 Tax=Sphaerobacter thermophilus ... 159 4e-38 UniRef50_C0GHM4 Ribonuclease n=1 Tax=Dethiobacter alkaliphilus A... 159 5e-38 UniRef50_Q03Y48 Ribonuclease HII n=10 Tax=Lactobacillales RepID=... 159 5e-38 UniRef50_D2MIZ6 Ribonuclease HII n=1 Tax=Candidatus Poribacteria... 158 8e-38 UniRef50_D1R4X2 Ribonuclease n=1 Tax=Parachlamydia acanthamoebae... 158 9e-38 UniRef50_C7RDQ2 Ribonuclease n=6 Tax=Clostridiales Family XI. In... 157 1e-37 UniRef50_C8PZH5 Ribonuclease n=1 Tax=Enhydrobacter aerosaccus SK... 157 2e-37 UniRef50_Q8YP68 Ribonuclease HII n=19 Tax=Cyanobacteria RepID=RN... 157 2e-37 UniRef50_C9KJR4 Ribonuclease n=1 Tax=Mitsuokella multacida DSM 2... 157 2e-37 UniRef50_A5UX01 Ribonuclease HII n=8 Tax=Chloroflexi RepID=RNH2_... 156 3e-37 UniRef50_Q49X31 Ribonuclease HII n=55 Tax=Staphylococcus RepID=R... 156 3e-37 UniRef50_D1Q046 Ribonuclease n=2 Tax=Prevotella RepID=D1Q046_9BACT 156 4e-37 UniRef50_B8CW25 Ribonuclease n=1 Tax=Halothermothrix orenii H 16... 155 6e-37 UniRef50_Q1MRU8 Ribonuclease HII n=2 Tax=Desulfovibrionales RepI... 155 6e-37 UniRef50_B5EBC6 Ribonuclease HII n=5 Tax=Deltaproteobacteria Rep... 155 6e-37 UniRef50_B9M597 Ribonuclease HII n=3 Tax=Deltaproteobacteria Rep... 155 9e-37 UniRef50_B6BS88 Ribonuclease n=1 Tax=Candidatus Pelagibacter sp.... 155 1e-36 UniRef50_C6BVQ6 Ribonuclease n=4 Tax=Desulfovibrionales RepID=C6... 154 2e-36 UniRef50_C1AAT1 Ribonuclease n=1 Tax=Gemmatimonas aurantiaca T-2... 153 3e-36 UniRef50_Q6NGJ8 Ribonuclease HII n=1 Tax=Corynebacterium diphthe... 153 3e-36 UniRef50_D2LBW7 Ribonuclease H n=1 Tax=Rhodomicrobium vannielii ... 153 3e-36 UniRef50_B7IF45 Ribonuclease HII n=3 Tax=Thermotogaceae RepID=RN... 153 3e-36 UniRef50_D0RRM6 Ribonuclease n=1 Tax=alpha proteobacterium HIMB1... 153 4e-36 UniRef50_Q4FT93 Ribonuclease HII n=2 Tax=Psychrobacter RepID=RNH... 153 4e-36 UniRef50_B9EBC6 Ribonuclease HII n=3 Tax=Staphylococcaceae RepID... 153 4e-36 UniRef50_C2ESF1 Ribonuclease n=5 Tax=Lactobacillaceae RepID=C2ES... 152 4e-36 UniRef50_C7NAV4 Ribonuclease n=5 Tax=Fusobacteriaceae RepID=C7NA... 152 6e-36 UniRef50_C4Z936 Ribonuclease n=4 Tax=Clostridiales RepID=C4Z936_... 152 7e-36 UniRef50_B9DPH3 Ribonuclease HII n=1 Tax=Staphylococcus carnosus... 152 7e-36 UniRef50_Q5WFP1 Ribonuclease HII n=2 Tax=Bacillaceae RepID=RNH2_... 152 8e-36 UniRef50_C8WWC4 Ribonuclease n=2 Tax=Alicyclobacillus acidocalda... 151 1e-35 UniRef50_C9LMH5 Ribonuclease n=1 Tax=Dialister invisus DSM 15470... 151 1e-35 UniRef50_A5FIL7 Ribonuclease HII n=4 Tax=Flavobacteriales RepID=... 151 1e-35 UniRef50_Q3A2F0 Ribonuclease HII n=3 Tax=Deltaproteobacteria Rep... 150 2e-35 UniRef50_O67768 Ribonuclease HII n=3 Tax=Aquificaceae RepID=RNH2... 150 3e-35 UniRef50_C4V2D5 Ribonuclease n=2 Tax=Clostridiales RepID=C4V2D5_... 149 4e-35 UniRef50_A8TXS8 Ribonuclease n=1 Tax=alpha proteobacterium BAL19... 149 5e-35 UniRef50_D1VVL3 Ribonuclease n=1 Tax=Peptoniphilus lacrimalis 31... 149 6e-35 UniRef50_Q0SSB4 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2... 149 7e-35 UniRef50_Q2SRV0 Ribonuclease HII n=5 Tax=Mollicutes RepID=RNH2_M... 148 1e-34 UniRef50_C6X037 Ribonuclease n=1 Tax=Flavobacteriaceae bacterium... 148 1e-34 UniRef50_D1B6E3 Ribonuclease n=2 Tax=Synergistaceae RepID=D1B6E3... 147 1e-34 UniRef50_A8MHC7 Ribonuclease HII n=3 Tax=Firmicutes RepID=RNH2_A... 147 2e-34 UniRef50_Q6MLA0 Ribonuclease HII n=1 Tax=Bdellovibrio bacteriovo... 147 2e-34 UniRef50_B7FYE5 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tr... 146 3e-34 UniRef50_Q5NNT2 Ribonuclease HII n=5 Tax=Alphaproteobacteria Rep... 145 6e-34 UniRef50_C6XGP6 Ribonuclease n=1 Tax=Candidatus Liberibacter asi... 145 6e-34 UniRef50_Q31PW0 Ribonuclease HII n=2 Tax=Synechococcus elongatus... 145 6e-34 UniRef50_A0QV44 Ribonuclease HII n=27 Tax=Actinomycetales RepID=... 145 7e-34 UniRef50_A9H3E2 Ribonuclease HII n=10 Tax=Acetobacteraceae RepID... 145 9e-34 UniRef50_Q3Z8D7 Ribonuclease HII n=2 Tax=Dehalococcoides RepID=R... 144 1e-33 UniRef50_Q73MG1 Ribonuclease HII n=1 Tax=Treponema denticola Rep... 144 2e-33 UniRef50_Q11KH2 Ribonuclease HII n=47 Tax=Alphaproteobacteria Re... 143 3e-33 UniRef50_D2RIH6 Ribonuclease H n=2 Tax=Acidaminococcus RepID=D2R... 143 3e-33 UniRef50_A8RBU7 Ribonuclease n=4 Tax=Erysipelotrichaceae RepID=A... 142 8e-33 UniRef50_Q3AC76 Ribonuclease HII n=1 Tax=Carboxydothermus hydrog... 142 8e-33 UniRef50_A5IIL8 Ribonuclease HII n=7 Tax=Thermotogaceae RepID=RN... 141 1e-32 UniRef50_C4XFT1 Ribonuclease n=1 Tax=Mycoplasma fermentans PG18 ... 141 1e-32 UniRef50_B3DVH3 Ribonuclease n=1 Tax=Methylacidiphilum infernoru... 141 1e-32 UniRef50_Q8RDX3 Ribonuclease HII n=12 Tax=Fusobacterium RepID=RN... 141 1e-32 UniRef50_B0TH73 Ribonuclease n=1 Tax=Heliobacterium modesticaldu... 141 1e-32 UniRef50_C9RN38 Ribonuclease n=1 Tax=Fibrobacter succinogenes su... 141 1e-32 UniRef50_C1FF37 Ribonuclease n=3 Tax=Mamiellales RepID=C1FF37_9CHLO 140 2e-32 UniRef50_C2C194 Ribonuclease n=1 Tax=Listeria grayi DSM 20601 Re... 140 3e-32 UniRef50_Q313K1 Ribonuclease HII n=7 Tax=Desulfovibrio RepID=RNH... 140 3e-32 UniRef50_A3ER37 Ribonuclease n=2 Tax=Leptospirillum sp. Group II... 140 3e-32 UniRef50_B1VG82 Ribonuclease n=1 Tax=Corynebacterium urealyticum... 139 4e-32 UniRef50_C5RBD5 Ribonuclease n=1 Tax=Weissella paramesenteroides... 139 5e-32 UniRef50_B0JV09 Ribonuclease HII n=3 Tax=Chroococcales RepID=RNH... 139 6e-32 UniRef50_A1HN67 Ribonuclease n=3 Tax=Veillonellaceae RepID=A1HN6... 139 6e-32 UniRef50_A7IES2 Ribonuclease HII n=10 Tax=Proteobacteria RepID=R... 139 7e-32 UniRef50_C1QE08 Ribonuclease n=1 Tax=Brachyspira murdochii DSM 1... 138 9e-32 UniRef50_A5PBF7 Ribonuclease n=2 Tax=Erythrobacter RepID=A5PBF7_... 138 1e-31 UniRef50_A5N820 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2... 138 1e-31 UniRef50_C2MC66 Ribonuclease n=1 Tax=Porphyromonas uenonis 60-3 ... 137 2e-31 UniRef50_B2S1N3 Ribonuclease HII n=2 Tax=Borrelia RepID=RNH2_BORHD 137 3e-31 UniRef50_C0E2A8 Ribonuclease n=2 Tax=Corynebacterium matruchotii... 137 3e-31 UniRef50_C0QW88 Ribonuclease n=1 Tax=Brachyspira hyodysenteriae ... 137 3e-31 UniRef50_A0LMM5 Ribonuclease HII n=10 Tax=Bacteria RepID=RNH2_SYNFM 136 3e-31 UniRef50_A9NF30 Ribonuclease HII n=2 Tax=Bacteria RepID=RNH2_ACHLI 135 6e-31 UniRef50_A5WDY2 Ribonuclease HII n=1 Tax=Psychrobacter sp. PRwf-... 135 6e-31 UniRef50_A6W7V4 Ribonuclease HII n=5 Tax=Actinomycetales RepID=R... 135 7e-31 UniRef50_A5FW78 Ribonuclease HII n=3 Tax=Alphaproteobacteria Rep... 135 7e-31 UniRef50_Q5SLU5 Ribonuclease HII n=8 Tax=Deinococci RepID=RNH2_T... 135 7e-31 UniRef50_Q5PBG2 Ribonuclease HII n=6 Tax=Anaplasmataceae RepID=R... 135 9e-31 UniRef50_A5CDI4 Ribonuclease HII n=17 Tax=Rickettsieae RepID=RNH... 135 1e-30 UniRef50_A9B6H3 Ribonuclease HII n=1 Tax=Herpetosiphon aurantiac... 135 1e-30 UniRef50_C6PQZ2 Ribonuclease n=1 Tax=Clostridium carboxidivorans... 135 1e-30 UniRef50_Q14PF8 Ribonuclease n=1 Tax=Spiroplasma citri RepID=Q14... 134 1e-30 UniRef50_B2KC56 Ribonuclease n=1 Tax=Elusimicrobium minutum Pei1... 134 1e-30 UniRef50_C4LJB6 Ribonuclease n=1 Tax=Corynebacterium kroppensted... 134 1e-30 UniRef50_Q7U4C6 Ribonuclease HII n=18 Tax=Cyanobacteria RepID=RN... 134 1e-30 UniRef50_Q1IMM1 Ribonuclease HII n=2 Tax=Acidobacteria RepID=RNH... 133 3e-30 UniRef50_Q4A278 Putative ribonuclease n=2 Tax=dsDNA viruses, no ... 133 3e-30 UniRef50_B9XLY3 Ribonuclease n=1 Tax=bacterium Ellin514 RepID=B9... 132 5e-30 UniRef50_Q67PD4 Ribonuclease HII 1 n=1 Tax=Symbiobacterium therm... 132 6e-30 UniRef50_B0N757 Ribonuclease n=4 Tax=Bacteria RepID=B0N757_9FIRM 132 7e-30 UniRef50_Q2JW45 Ribonuclease HII n=5 Tax=Cyanobacteria RepID=RNH... 132 8e-30 UniRef50_Q3B6X8 Ribonuclease HII n=5 Tax=Chlorobiaceae RepID=RNH... 131 1e-29 UniRef50_C7MY90 Ribonuclease n=3 Tax=Actinomycetales RepID=C7MY9... 130 2e-29 UniRef50_A9TVJ6 Ribonuclease n=2 Tax=cellular organisms RepID=A9... 130 2e-29 UniRef50_Q6AJE5 Ribonuclease HII n=1 Tax=Desulfotalea psychrophi... 130 2e-29 UniRef50_A5HUH4 Ribonuclease n=1 Tax=uncultured bacterium RepID=... 130 3e-29 UniRef50_Q04F44 Ribonuclease n=2 Tax=Oenococcus oeni RepID=Q04F4... 129 6e-29 UniRef50_Q0SPB8 Ribonuclease HII n=18 Tax=Bacteria RepID=RNH2_BORAP 129 8e-29 UniRef50_Q11R91 Ribonuclease HII n=55 Tax=Bacteroidetes RepID=RN... 129 8e-29 UniRef50_A6WW84 Ribonuclease HII n=4 Tax=Rhizobiales RepID=RNH2_... 128 1e-28 UniRef50_A9BI79 Ribonuclease n=1 Tax=Petrotoga mobilis SJ95 RepI... 128 1e-28 UniRef50_A7I0I5 Ribonuclease HII n=7 Tax=Campylobacter RepID=RNH... 127 2e-28 UniRef50_Q30TX0 Ribonuclease n=4 Tax=Helicobacteraceae RepID=Q30... 126 3e-28 UniRef50_C6HV29 Ribonuclease n=1 Tax=Leptospirillum ferrodiazotr... 126 3e-28 UniRef50_C7PK08 Ribonuclease n=23 Tax=Bacteria RepID=C7PK08_CHIPD 125 6e-28 UniRef50_Q7UZZ2 Ribonuclease HII n=7 Tax=Prochlorococcus marinus... 125 7e-28 UniRef50_D1N706 Ribonuclease n=1 Tax=Victivallis vadensis ATCC B... 125 1e-27 UniRef50_B9L043 Ribonuclease n=1 Tax=Thermomicrobium roseum DSM ... 124 1e-27 UniRef50_C7MNC1 Ribonuclease n=2 Tax=Coriobacteriaceae RepID=C7M... 124 1e-27 UniRef50_D1CBL6 Ribonuclease n=1 Tax=Thermobaculum terrenum ATCC... 124 1e-27 UniRef50_Q13BU3 Ribonuclease HII n=19 Tax=Bacteria RepID=RNH2_RHOPS 122 5e-27 UniRef50_A4S5U9 Ribonuclease (Fragment) n=1 Tax=Ostreococcus luc... 122 6e-27 UniRef50_C5LZG5 Ribonuclease n=5 Tax=Eukaryota RepID=C5LZG5_9ALVE 122 7e-27 UniRef50_D2SE00 Ribonuclease H n=2 Tax=Actinomycetales RepID=D2S... 122 8e-27 UniRef50_A8EVA1 Ribonuclease HII n=4 Tax=Epsilonproteobacteria R... 122 1e-26 UniRef50_B6BTW0 Ribonuclease n=1 Tax=beta proteobacterium KB13 R... 121 1e-26 UniRef50_A3VNV1 Ribonuclease n=1 Tax=Parvularcula bermudensis HT... 121 2e-26 UniRef50_A5IZB4 Ribonuclease n=1 Tax=Mycoplasma agalactiae PG2 R... 121 2e-26 UniRef50_C7MB80 Ribonuclease n=1 Tax=Brachybacterium faecium DSM... 119 4e-26 UniRef50_C8PH70 Ribonuclease n=1 Tax=Campylobacter gracilis RM32... 119 7e-26 UniRef50_C7LXT7 Ribonuclease n=1 Tax=Acidimicrobium ferrooxidans... 118 1e-25 UniRef50_C8WAJ0 Ribonuclease n=2 Tax=Atopobium RepID=C8WAJ0_ATOPD 117 2e-25 UniRef50_C1SJ31 Ribonuclease n=1 Tax=Denitrovibrio acetiphilus D... 117 2e-25 UniRef50_C0A3Z9 Ribonuclease n=1 Tax=Opitutaceae bacterium TAV2 ... 117 2e-25 UniRef50_Q3XZB5 Ribonuclease n=1 Tax=Enterococcus faecium DO Rep... 115 1e-24 UniRef50_A8SLV4 Ribonuclease n=2 Tax=Clostridiales Family XI. In... 114 2e-24 UniRef50_Q82KF0 Ribonuclease HII n=15 Tax=Actinomycetales RepID=... 112 9e-24 UniRef50_B3T7B1 Putative Ribonuclease HII n=1 Tax=uncultured mar... 111 2e-23 UniRef50_UPI000051041B ribonuclease HII n=1 Tax=Brevibacterium l... 110 2e-23 UniRef50_Q04SW6 Ribonuclease n=4 Tax=Leptospira RepID=Q04SW6_LEPBJ 110 3e-23 UniRef50_B1ZMV3 Ribonuclease n=1 Tax=Opitutus terrae PB90-1 RepI... 110 3e-23 UniRef50_A4ECJ3 Ribonuclease n=3 Tax=Collinsella RepID=A4ECJ3_9ACTN 110 4e-23 UniRef50_C7R325 Ribonuclease n=2 Tax=Micrococcineae RepID=C7R325... 109 4e-23 UniRef50_B9L797 Ribonuclease n=3 Tax=Epsilonproteobacteria RepID... 108 7e-23 UniRef50_B1LVZ9 Ribonuclease n=9 Tax=Alphaproteobacteria RepID=B... 108 1e-22 UniRef50_B2V752 Ribonuclease HII n=3 Tax=Sulfurihydrogenibium Re... 107 2e-22 UniRef50_B5Y443 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tr... 107 2e-22 UniRef50_Q8EUA9 Ribonuclease n=1 Tax=Mycoplasma penetrans RepID=... 105 6e-22 UniRef50_Q9ZJR1 Ribonuclease HII n=15 Tax=Helicobacteraceae RepI... 105 8e-22 UniRef50_C8WGY3 Ribonuclease n=3 Tax=Coriobacteriaceae RepID=C8W... 104 1e-21 UniRef50_B4U9C0 Ribonuclease n=1 Tax=Hydrogenobaculum sp. Y04AAS... 103 3e-21 UniRef50_B0S8P2 Ribonuclease n=2 Tax=Leptospira biflexa serovar ... 103 3e-21 UniRef50_A0JXT5 Ribonuclease HII n=4 Tax=Micrococcaceae RepID=RN... 103 5e-21 UniRef50_B1VXS2 Ribonuclease HII n=10 Tax=Actinomycetales RepID=... 100 2e-20 UniRef50_A7H1A3 Ribonuclease HII n=16 Tax=Campylobacter RepID=RN... 100 5e-20 UniRef50_Q7VK86 Ribonuclease n=1 Tax=Helicobacter hepaticus RepI... 99 6e-20 UniRef50_B8HA90 Ribonuclease n=2 Tax=Arthrobacter RepID=B8HA90_A... 99 7e-20 UniRef50_B5Y8F7 Ribonuclease n=1 Tax=Coprothermobacter proteolyt... 97 2e-19 UniRef50_C2BVF7 Ribonuclease n=1 Tax=Mobiluncus curtisii ATCC 43... 97 3e-19 UniRef50_C3XGM9 Ribonuclease n=1 Tax=Helicobacter bilis ATCC 438... 97 4e-19 UniRef50_Q6KH21 Ribonuclease n=1 Tax=Mycoplasma mobile RepID=Q6K... 94 2e-18 UniRef50_Q5MCR3 Ribonuclease n=4 Tax=Leishmania RepID=Q5MCR3_LEIMA 93 5e-18 UniRef50_D2NTN7 Ribonuclease HII n=2 Tax=Rothia mucilaginosa Rep... 92 1e-17 UniRef50_B5JFA5 Ribonuclease n=1 Tax=Verrucomicrobiae bacterium ... 91 3e-17 UniRef50_UPI000197799D ribonuclease HII n=1 Tax=Helicobacter cin... 89 6e-17 UniRef50_A0ZZY2 Ribonuclease n=11 Tax=Bifidobacteriaceae RepID=A... 89 1e-16 UniRef50_A4J2Z7 Ribonuclease n=1 Tax=Desulfotomaculum reducens M... 86 5e-16 UniRef50_UPI0001C31AB6 Ribonuclease H n=1 Tax=Conexibacter woese... 85 2e-15 UniRef50_Q1AW72 Ribonuclease n=1 Tax=Rubrobacter xylanophilus DS... 84 3e-15 UniRef50_Q6AEA6 Ribonuclease n=2 Tax=Actinobacteria (class) RepI... 82 1e-14 UniRef50_C8PNM3 Ribonuclease n=1 Tax=Treponema vincentii ATCC 35... 80 4e-14 UniRef50_B8DRI2 Ribonuclease n=1 Tax=Desulfovibrio vulgaris str.... 80 5e-14 UniRef50_A9U7G7 Ribonuclease (Fragment) n=1 Tax=Physcomitrella p... 78 2e-13 UniRef50_C1RMG0 Ribonuclease n=1 Tax=Cellulomonas flavigena DSM ... 77 3e-13 UniRef50_C5BWW5 Ribonuclease n=7 Tax=Actinomycetales RepID=C5BWW... 76 7e-13 UniRef50_B6YVT5 Ribonuclease HII n=10 Tax=Euryarchaeota RepID=RN... 76 8e-13 UniRef50_Q9YET5 Ribonuclease HII n=1 Tax=Aeropyrum pernix RepID=... 75 1e-12 UniRef50_Q4JA60 Ribonuclease HII n=12 Tax=Sulfolobaceae RepID=RN... 75 1e-12 UniRef50_C7GZF7 Ribonuclease n=1 Tax=Eubacterium saphenum ATCC 4... 73 6e-12 UniRef50_B8C6T8 Ribonuclease n=1 Tax=Thalassiosira pseudonana Re... 72 7e-12 UniRef50_C4VBD8 Ribonuclease n=1 Tax=Nosema ceranae BRL01 RepID=... 71 2e-11 UniRef50_Q4CU74 Ribonuclease n=10 Tax=Trypanosomatidae RepID=Q4C... 71 2e-11 UniRef50_Q0W5R8 Ribonuclease HII n=2 Tax=Euryarchaeota RepID=RNH... 71 2e-11 UniRef50_A2BL34 Ribonuclease HII n=1 Tax=Hyperthermus butylicus ... 70 3e-11 UniRef50_D2RFM0 Ribonuclease HII n=1 Tax=Archaeoglobus profundus... 70 4e-11 UniRef50_B7GN37 Ribonuclease n=5 Tax=Bifidobacterium longum RepI... 69 7e-11 UniRef50_D0YUF0 Ribonuclease n=2 Tax=Mobiluncus mulieris RepID=D... 68 1e-10 UniRef50_B1L3S7 Ribonuclease n=1 Tax=Candidatus Korarchaeum cryp... 68 2e-10 UniRef50_A7I9P7 Ribonuclease HII n=4 Tax=Methanomicrobiales RepI... 67 3e-10 UniRef50_A0RV25 Ribonuclease HII n=2 Tax=Thaumarchaeota RepID=RN... 66 6e-10 UniRef50_B8DVT3 Ribonuclease n=4 Tax=Bifidobacterium animalis su... 66 6e-10 UniRef50_UPI000038E392 ribonuclease HII n=1 Tax=Ferroplasma acid... 66 6e-10 UniRef50_B3T5F3 Putative uncharacterized protein family UPF0102 ... 66 8e-10 UniRef50_Q468N6 Ribonuclease HII n=4 Tax=Methanosarcinaceae RepI... 65 1e-09 UniRef50_UPI00006CE52A ribonuclease HII family protein n=1 Tax=T... 65 1e-09 UniRef50_A4WHQ7 Ribonuclease HII n=4 Tax=Pyrobaculum RepID=RNH2_... 65 1e-09 UniRef50_B9LQC3 Ribonuclease n=4 Tax=Halobacteriaceae RepID=B9LQ... 64 2e-09 UniRef50_A1RYM0 Ribonuclease HII n=1 Tax=Thermofilum pendens Hrk... 63 6e-09 UniRef50_Q97CG6 Ribonuclease HII n=3 Tax=Thermoplasma RepID=RNH2... 63 7e-09 >UniRef50_A8FY28 Ribonuclease HII n=14 Tax=Bacteria RepID=RNH2_SHESH Length = 213 Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 127/192 (66%), Positives = 142/192 (73%), Gaps = 8/192 (4%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L AGVDEVGRGPLVG VVTAAVILDP +PI GLNDSKKLSEK+R AL+ EI EKAL+ S+ Sbjct: 19 LYAGVDEVGRGPLVGNVVTAAVILDPTKPITGLNDSKKLSEKKREALFTEIHEKALAISI 78 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP--------MPAMAV 122 G A P EIDELNILHATMLAMQRAVAGL +AP VL+DGNR P + + A+ Sbjct: 79 GYASPEEIDELNILHATMLAMQRAVAGLDMAPTSVLVDGNRTPDFSHGEDTDRNIESHAI 138 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD V ISAASI+AKV RD EM LD+ PQYGFA+HKGYPT H E LA HG Sbjct: 139 IKGDGLVAGISAASIVAKVIRDREMDLLDMEHPQYGFAKHKGYPTKAHFEALALHGVLPE 198 Query: 183 HRRSFGPVKRAL 194 HR+SF PVK L Sbjct: 199 HRKSFRPVKERL 210 >UniRef50_B1YS60 Ribonuclease HII n=13 Tax=cellular organisms RepID=RNH2_BURA4 Length = 217 Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 116/195 (59%), Positives = 133/195 (68%), Gaps = 1/195 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 +F P ++V GVDE GRGPL G VV AAVILDPARPI GL+DSK LS K+R ALY+ I Sbjct: 19 FDFSRPD-EIVCGVDEAGRGPLAGPVVAAAVILDPARPIDGLDDSKALSAKKRDALYDLI 77 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 +A ++ + A EID LNILHATMLAM+RAV GL + P IDGNRCP L + A A Sbjct: 78 VARASAFCVASASVDEIDTLNILHATMLAMKRAVEGLSVLPTLAQIDGNRCPTLTVRAEA 137 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +V GD+ VP ISAASILAKVTRD + L FP YGF H GY T HL L EHG E Sbjct: 138 IVSGDALVPSISAASILAKVTRDRMLVDLHERFPVYGFNVHVGYSTPQHLAALREHGPCE 197 Query: 182 HHRRSFGPVKRALGL 196 HRRSF PV+ AL L Sbjct: 198 VHRRSFAPVREALDL 212 >UniRef50_C0EQ70 Ribonuclease n=2 Tax=Neisseria flavescens RepID=C0EQ70_NEIFL Length = 230 Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 115/187 (61%), Positives = 136/187 (72%), Gaps = 1/187 (0%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 T L AGVDE GRGPLVG+V AAVIL + GL DSKKLSEK+R L + IKE+A++W Sbjct: 36 TVLSAGVDEAGRGPLVGSVFAAAVILPEHFDLPGLTDSKKLSEKKRDMLAQMIKEQAVAW 95 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDS 127 S+ A+P EI +LNILHATM AM+RAV GL +AP+ V IDGNR PK L +PA AVVKGDS Sbjct: 96 SIAFADPDEILKLNILHATMAAMKRAVEGLSVAPDKVWIDGNRVPKDLNVPAEAVVKGDS 155 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ++ EISAAS+LAK RDAEM L +PQYGF +HKGY TA HL L ++G HRR F Sbjct: 156 KIIEISAASVLAKTARDAEMYELAKRYPQYGFDRHKGYGTAQHLAALKQYGVLLEHRRDF 215 Query: 188 GPVKRAL 194 PVK L Sbjct: 216 APVKTLL 222 >UniRef50_A1TN83 Ribonuclease HII n=11 Tax=Proteobacteria RepID=RNH2_ACIAC Length = 240 Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 115/184 (62%), Positives = 130/184 (70%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 LVAGVDE GRGPL G VV AAVILD +PI GL DSK L+ RR AL++EI+ KAL S+ Sbjct: 22 LVAGVDEAGRGPLAGPVVAAAVILDELQPIEGLADSKTLTAARREALFDEIRAKALCCSV 81 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 A EID LNIL ATMLAM+RAVAGL + P VL+DGNR P L +PA A+VKGD+ V Sbjct: 82 AEATVEEIDTLNILQATMLAMRRAVAGLRLKPVRVLVDGNRLPPLDVPAEAIVKGDALVQ 141 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ISAASILAKVTRD A L +P YGFA HKGY TA H+ L HGA HRRSF PV Sbjct: 142 AISAASILAKVTRDRWCAQLHEAYPHYGFASHKGYGTAEHMAALQAHGACPEHRRSFAPV 201 Query: 191 KRAL 194 A+ Sbjct: 202 AAAV 205 >UniRef50_A3NAT3 Ribonuclease HII n=37 Tax=Bacteria RepID=RNH2_BURP6 Length = 214 Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 115/195 (58%), Positives = 135/195 (69%), Gaps = 1/195 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 ++F P ++V GVDE GRGPL G VV AAV+LDPARPI GL+DSK LS K+R L++EI Sbjct: 19 LDFDAP-GEIVCGVDEAGRGPLAGPVVAAAVVLDPARPIVGLDDSKALSAKKRERLFDEI 77 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 AL++S+ A EID LNILHATMLAM+RAV GL + P IDGNRCP L + + A Sbjct: 78 VVHALAYSVASASVEEIDSLNILHATMLAMKRAVEGLSVLPTLAKIDGNRCPMLAIRSEA 137 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +V GD+ VP ISAASILAKVTRD + L FP YGF H GY T HL L EHG E Sbjct: 138 IVGGDALVPSISAASILAKVTRDRMLVELHQQFPMYGFDAHAGYGTPQHLAALREHGPCE 197 Query: 182 HHRRSFGPVKRALGL 196 HHRRSF PV+ A L Sbjct: 198 HHRRSFAPVREAFDL 212 >UniRef50_B2T5I0 Ribonuclease HII n=16 Tax=Proteobacteria RepID=RNH2_BURPP Length = 248 Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 109/193 (56%), Positives = 132/193 (68%), Gaps = 2/193 (1%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEE 60 + F P +V GVDE GRGPL G VV AAVI DP++P I GL+DSK L+ K+R LY++ Sbjct: 22 LNFETPD-DIVCGVDEAGRGPLAGPVVAAAVIFDPSKPMIRGLDDSKVLTAKKRDELYDK 80 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 I ++AL++ + A EID LNILHATMLAM+RAV GL + P V IDGNRCP L + + Sbjct: 81 IVDRALAYCIASATVEEIDSLNILHATMLAMKRAVEGLSVVPTLVKIDGNRCPTLSVRSE 140 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 AV+ GD+ V ISAASILAKVTRD + L P YGF H GY T HL+ L EHG Sbjct: 141 AVIGGDALVKSISAASILAKVTRDRMLLELHQTHPVYGFNAHAGYGTPQHLKALREHGPC 200 Query: 181 EHHRRSFGPVKRA 193 EHHRRSF PV+ A Sbjct: 201 EHHRRSFAPVREA 213 >UniRef50_Q0AEI5 Ribonuclease HII n=2 Tax=Nitrosomonas RepID=RNH2_NITEC Length = 219 Score = 195 bits (495), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 99/189 (52%), Positives = 127/189 (67%), Gaps = 1/189 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E+++P + + GVDE GRGPL G V A V+LD I GL DSK+LSEKRR +L E+IK Sbjct: 25 EWIHPEGKAIYGVDEAGRGPLAGPVYAACVVLDSCYVINGLADSKQLSEKRRASLAEQIK 84 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH-IAPEYVLIDGNRCPKLPMPAMA 121 + A +W++ A EID LNIL A+MLAM+RAV L ++ +L+DG P+L A Sbjct: 85 QHARAWAIASASVEEIDRLNILQASMLAMRRAVIELMPVSNALILVDGTHVPQLDYEVQA 144 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 V++GDS V EISAASILAK RDAEM L ++P YGF +HKGYPT HL+ + HG T Sbjct: 145 VIRGDSLVAEISAASILAKTARDAEMLRLHEIYPIYGFDRHKGYPTRVHLDAIRLHGITA 204 Query: 182 HHRRSFGPV 190 HR+SF P Sbjct: 205 THRKSFAPC 213 >UniRef50_B9ZNV1 Ribonuclease n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNV1_9GAMM Length = 226 Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 112/184 (60%), Positives = 131/184 (71%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 VAGVDEVGRGPL G VV AAVIL + GL DSKKLS RR AL EI+E+A++W+L Sbjct: 35 WVAGVDEVGRGPLAGPVVAAAVILPESFAAPGLTDSKKLSAGRRQALDVEIRERAVAWAL 94 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 GRAE EID LNI AT+LAMQRAVA L AP+++L+DG P+ P A A+V GD V Sbjct: 95 GRAEAAEIDALNIHRATLLAMQRAVAALSQAPDHLLVDGRFTPEGPWSAEAIVGGDGSVA 154 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ISAAS++AKV RDAEM AL +P YGF +H GYPTA+H + LA G HRRSFGPV Sbjct: 155 AISAASVIAKVARDAEMTALHERYPDYGFDRHAGYPTAYHRDALARLGPCVEHRRSFGPV 214 Query: 191 KRAL 194 RAL Sbjct: 215 ARAL 218 >UniRef50_A8SF05 Ribonuclease n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF05_9FIRM Length = 215 Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 99/176 (56%), Positives = 121/176 (68%), Gaps = 1/176 (0%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGR 72 AGVDE GRGPL G V AA ILDP P+ G+NDSKKL+EK+R AL++EI EKAL++ + Sbjct: 28 AGVDEAGRGPLCGPVCVAACILDPENPVYGINDSKKLTEKKREALFDEICEKALAYRIIF 87 Query: 73 AEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSRVPE 131 P ID NIL+ATM MQ+AV L I P VL+DGNR P L +PA VVKGD+ Sbjct: 88 VGPEVIDRENILNATMGGMQQAVEELDIVPNLVLVDGNRTPAGLQIPAQPVVKGDATSAS 147 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I AAS+LAKV+RD M LD +PQY A+HKGYPT H E +A++G +RRSF Sbjct: 148 IGAASVLAKVSRDRYMLELDKQYPQYQLAKHKGYPTKLHYELIAQYGIQPFYRRSF 203 >UniRef50_Q7VRD2 Ribonuclease HII n=1 Tax=Candidatus Blochmannia floridanus RepID=RNH2_BLOFL Length = 205 Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/199 (47%), Positives = 129/199 (64%), Gaps = 5/199 (2%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVIL---DPARPIAGLNDSKKLSEKRRLALYEE 60 F+ +VAGVDEVG G LVGAVV +AV++ D + +GL DSK LS K+RL Sbjct: 7 FLSKKATIVAGVDEVGCGSLVGAVVASAVLMLYPDQEQLFSGLIDSKALSNKKRLRFCNY 66 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 I++ +L WS+G EID+LNI A +L+++RA+ L + P+ VLIDG P L + Sbjct: 67 IQKYSLHWSIGMVNVTEIDQLNIFQARLLSIKRAICNLSMIPDLVLIDGKHAPSLNKNIL 126 Query: 121 --AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 VKGDSR+P ISAASI+AKVTRD M L +P+YGF ++KGY T FHL++L +G Sbjct: 127 YQCFVKGDSRIPVISAASIIAKVTRDQAMMMLHTQYPKYGFHRNKGYATVFHLKQLDLYG 186 Query: 179 ATEHHRRSFGPVKRALGLA 197 T +HR++F PVK L + Sbjct: 187 PTIYHRKTFAPVKYMLSMC 205 >UniRef50_A4J661 Ribonuclease HII n=2 Tax=Clostridia RepID=RNH2_DESRM Length = 198 Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 92/184 (50%), Positives = 122/184 (66%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L GVDE GRG + + +A ILDPA PI GL DSKKLS ++R L EEIK+ ALSW + Sbjct: 3 LECGVDETGRGSCISGIYASACILDPAHPIEGLRDSKKLSARKREILAEEIKQYALSWCI 62 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 +A E+++LN+ HAT+LAM+RA+ GL I V +DG P++ +PA A+VKGD +P Sbjct: 63 AQASLEEVEQLNVHHATLLAMKRAIEGLSIRANKVYVDGIHLPEVDIPAEAIVKGDDLIP 122 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ISAASILAKV RD M +PQYGF HKGY T H E L ++G + HR+++ P+ Sbjct: 123 AISAASILAKVARDGAMLEYHEKYPQYGFNSHKGYLTKAHREALKKYGPSPIHRKTYAPI 182 Query: 191 KRAL 194 + L Sbjct: 183 RELL 186 >UniRef50_B0SZF7 Ribonuclease HII n=6 Tax=Caulobacteraceae RepID=RNH2_CAUSK Length = 230 Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 101/184 (54%), Positives = 120/184 (65%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 LV GVDE GRGP G V AAVILDP+R GL+DSKKLS K R L EIK+ A++W + Sbjct: 31 LVCGVDEAGRGPWAGPVSAAAVILDPSRVPKGLDDSKKLSAKARAVLEIEIKQVAVAWCV 90 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A EI+ELNILHA LAM RA+ GL + P+ L+DGN +LP P V+KGDS Sbjct: 91 GLASIEEIEELNILHAAGLAMCRAIDGLSVKPDIALVDGNYRFELPCPIKTVIKGDSLSC 150 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAK RD M +D + P YGFA HKGY A H+E L G + HR S+ PV Sbjct: 151 SIAAASILAKEARDRIMVEMDALHPGYGFASHKGYHAAIHVEGLRRLGPSPIHRLSWAPV 210 Query: 191 KRAL 194 K AL Sbjct: 211 KLAL 214 >UniRef50_C8W5A6 Ribonuclease n=3 Tax=Bacteria RepID=C8W5A6_DESAS Length = 268 Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 97/181 (53%), Positives = 118/181 (65%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L+AGVDE GRGPL G VV AAVIL + GLNDSKKL R L+ IK ALSW++ Sbjct: 75 LIAGVDEAGRGPLAGPVVAAAVILPENACLPGLNDSKKLPVSARERLFVAIKPIALSWAV 134 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A EI ELNIL A++LAM R+V L + P++VL+DG LP+P ++VKGD+ Sbjct: 135 GMASVEEICELNILQASLLAMCRSVDSLKVKPDFVLVDGPNGLNLPLPQYSLVKGDTLSA 194 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I++ASILAKVTRD M FP+YGF +HKGYPT HL L +G HRR F PV Sbjct: 195 SIASASILAKVTRDKIMLEYHDEFPEYGFDRHKGYPTVEHLRALTRYGPCRIHRRDFKPV 254 Query: 191 K 191 K Sbjct: 255 K 255 >UniRef50_Q0AMK3 Ribonuclease HII n=3 Tax=Proteobacteria RepID=RNH2_MARMM Length = 218 Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 109/189 (57%), Positives = 126/189 (66%), Gaps = 4/189 (2%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 +T +AGVDE GRGPL G VV AAVILDP RPI GL DSK LSE+RR L+ I+ A Sbjct: 20 NTVRIAGVDEAGRGPLSGPVVAAAVILDPTRPITGLGDSKALSERRRRELFRLIRANA-- 77 Query: 68 W-SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKG 125 W +G AEP EID LNILHATM AM+RAVA L + P VL+DGNR P LP PA A++KG Sbjct: 78 WVGIGIAEPAEIDRLNILHATMAAMRRAVARLPVRPTLVLVDGNRLPPGLPCPAEAIIKG 137 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D++ I AASI+AK RD M FP YGF HKGYP+A H L GA HRR Sbjct: 138 DAKEACIGAASIIAKTVRDDLMEQAARRFPGYGFEGHKGYPSAAHKAALETSGACPIHRR 197 Query: 186 SFGPVKRAL 194 S+ PV+ AL Sbjct: 198 SYAPVRAAL 206 >UniRef50_Q18BC9 Ribonuclease HII n=15 Tax=Bacteria RepID=RNH2_CLOD6 Length = 255 Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 87/176 (49%), Positives = 117/176 (66%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGPL G VV + V+ I G+NDSKKLSE +R L+E IKE+AL + +G Sbjct: 75 IGGIDEAGRGPLAGPVVASVVVFKKDTKIEGVNDSKKLSEAKRDELFEVIKEEALDYGIG 134 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 EIDE NIL+AT +AM++A+ L AP+Y+L+D P + + +VKGDS+ Sbjct: 135 IVNNEEIDEFNILNATYMAMKKAINCLKKAPDYLLVDAATIPGIDISQNPIVKGDSKSIS 194 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASILAKVTRD+ M D V+P+YGF HKGY T H E + ++G T HR+SF Sbjct: 195 IAAASILAKVTRDSIMYQYDRVYPEYGFKSHKGYGTKEHYEAIEKYGITPIHRKSF 250 >UniRef50_B8FRK8 Ribonuclease HII n=5 Tax=Bacteria RepID=RNH2_DESHD Length = 260 Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 96/185 (51%), Positives = 128/185 (69%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +AG+DE GRGPL G VV A IL + GLNDSKKL+E +R L+++IKE+A+ +++G Sbjct: 75 IAGIDEAGRGPLAGPVVAATCILPAKFNLPGLNDSKKLTESKREKLFQQIKEQAIGYAVG 134 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 AEP EID LNIL AT LAM+RAV GL + P ++LID P L +P ++ GD+ Sbjct: 135 SAEPAEIDGLNILQATKLAMKRAVEGLKVRPHFLLIDALELPSLKIPQKGIIDGDALSAS 194 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASILAKV+RD M LD ++P+YGFA++KGY T HL L HG + HRRSF PV+ Sbjct: 195 IAAASILAKVSRDHLMGELDKLYPEYGFAKNKGYGTREHLMALRRHGVSPIHRRSFAPVQ 254 Query: 192 RALGL 196 + L + Sbjct: 255 QQLDI 259 >UniRef50_A7HQZ3 Ribonuclease HII n=43 Tax=Bacteria RepID=RNH2_PARL1 Length = 269 Score = 178 bits (451), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 103/186 (55%), Positives = 119/186 (63%), Gaps = 2/186 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +LV GVDE GRGPL G VV AAVI+D R GLNDSKKL RR L E+ + A Sbjct: 61 RLVCGVDEAGRGPLAGPVVAAAVIIDLTRCPEGLNDSKKLDAARRADLLAELADCA-EIG 119 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGDSR 128 +G A EIDE+NILHATMLAM RAVA L AP LIDGNRCP L + AV+ GD+ Sbjct: 120 VGIASVEEIDEINILHATMLAMTRAVASLPRAPHIALIDGNRCPPSLACASRAVIGGDAL 179 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+AASI+AKVTRD MAAL P YGF +H GY T H + L+ G HRRSF Sbjct: 180 ARSIAAASIVAKVTRDRMMAALAETHPGYGFEKHMGYSTPEHFDALSRLGPCAIHRRSFA 239 Query: 189 PVKRAL 194 PV++ L Sbjct: 240 PVRKML 245 >UniRef50_A7H722 Ribonuclease HII n=9 Tax=Bacteria RepID=RNH2_ANADF Length = 315 Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 95/187 (50%), Positives = 118/187 (63%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 LVAGVDE G PL G VV A IL G++DSK+L + R L E+IK A+ W++ Sbjct: 79 LVAGVDEAGMAPLAGPVVAGACILPRDYRPRGIDDSKQLDRRERERLAEDIKANAVCWAV 138 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 RAE EID LNI A +LA+ RAV L AP +VL+D + P+L +P ++ GD+ Sbjct: 139 ARAEVEEIDRLNIYRAGLLALTRAVQALTPAPGHVLVDARKLPELRLPQTPIIHGDALSL 198 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAK TRD M LD ++P YGF HKGYPTA H + L GA HRRSF PV Sbjct: 199 TIAAASILAKTTRDELMGELDALYPGYGFCNHKGYPTAEHFQALERLGACPIHRRSFQPV 258 Query: 191 KRALGLA 197 + ALGLA Sbjct: 259 REALGLA 265 >UniRef50_A9KLL7 Ribonuclease HII n=39 Tax=Bacteria RepID=RNH2_CLOPH Length = 254 Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 92/185 (49%), Positives = 122/185 (65%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E YP + + G+DEVGRGPL G V+ AVIL I +NDSK+LSEK+R ALY+EI Sbjct: 63 ELSYPDYRYICGIDEVGRGPLAGPVIACAVILPKDCEILYINDSKQLSEKKREALYDEIM 122 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 EKA+S +G A I+E+NIL AT AM+ A+ L + PE +L D PK+ +P + + Sbjct: 123 EKAISVGIGSASHARIEEINILQATYEAMRGAINKLGVVPELLLNDAVTIPKVVIPQVPI 182 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD++ I+AASI+AKVTRD M D VFP YGFA +KGY +A H++ L E G + Sbjct: 183 IKGDAKSISIAAASIVAKVTRDRLMVEYDTVFPGYGFASNKGYGSADHIKALKELGPSPI 242 Query: 183 HRRSF 187 HR SF Sbjct: 243 HRASF 247 >UniRef50_B5W7X5 Ribonuclease n=2 Tax=Arthrospira RepID=B5W7X5_SPIMA Length = 223 Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 94/186 (50%), Positives = 119/186 (63%), Gaps = 5/186 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIKEKALS 67 VAG+DEVGRG G VV AAV L + AG+ DSKKL+ RL+L I+ KA++ Sbjct: 31 VAGIDEVGRGAWFGPVVAAAVQLSETTILELAAAGVKDSKKLTHNDRLSLSTLIRSKAIA 90 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKGD 126 +G A EID LNIL AT LAM+R++ L P++ L+DGNR P L +P A+VKGD Sbjct: 91 CQIGWASAREIDRLNILQATQLAMRRSILKLQPPPQFCLVDGNRLIPNLSIPQQAIVKGD 150 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S I+A+SI+AKV RD M LD +PQYGFAQHKGY T H + L +G HHR S Sbjct: 151 SHCVVIAASSIVAKVWRDELMTRLDRTYPQYGFAQHKGYGTKQHKQALQSYGPCFHHRFS 210 Query: 187 FGPVKR 192 F PV++ Sbjct: 211 FAPVRQ 216 >UniRef50_A0NVD9 Ribonuclease n=2 Tax=Rhodobacteraceae RepID=A0NVD9_9RHOB Length = 228 Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 101/185 (54%), Positives = 117/185 (63%), Gaps = 2/185 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + GVDE GRGP G VVTAAVILD R GLNDSKKL+E RR L+E+I A SL Sbjct: 44 LCGVDEAGRGPWAGPVVTAAVILDYDRLPDGLNDSKKLTEARREELFEQIVASA-HVSLA 102 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGDSRVP 130 A P ID +NI AT+ AM RAV L + P+YVL+DG P L A++KGD R Sbjct: 103 SASPATIDAVNIRTATLSAMVRAVNHLPLVPDYVLVDGRDVPLGLKQAGQALIKGDGRCL 162 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ++AASI+AKVTRD M LD FP YGFAQHKGY H + L HG T HHR SF PV Sbjct: 163 CVAAASIVAKVTRDRMMVHLDARFPDYGFAQHKGYGVPQHQQALERHGPTVHHRMSFKPV 222 Query: 191 KRALG 195 + A G Sbjct: 223 RLAAG 227 >UniRef50_C5NXH7 Ribonuclease n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH7_9BACL Length = 258 Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 86/183 (46%), Positives = 118/183 (64%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 + + G+DEVGRGPL G VV AAVIL GLNDSKKLSEK+R LYE+I+++A+++ Sbjct: 67 CKYICGIDEVGRGPLAGPVVAAAVILKKDNYFEGLNDSKKLSEKKREELYEQIRKEAVAY 126 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 ++ + EI++ NI +A +AMQRAV L + P+++LID P+P ++VKGD + Sbjct: 127 AICEVDNIEIEKYNIYNAARIAMQRAVEKLEVKPDFLLIDAMPFENYPIPNFSMVKGDEK 186 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+AAS++AKV RD M +P Y F + GY T HLE L EHG T HRR F Sbjct: 187 SVSIAAASVIAKVYRDNLMKEYAKKYPHYDFENNAGYGTKKHLEGLKEHGVTPIHRRDFE 246 Query: 189 PVK 191 P+K Sbjct: 247 PIK 249 >UniRef50_A6NUN5 Ribonuclease n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUN5_9BACE Length = 210 Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 89/178 (50%), Positives = 116/178 (65%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 QL+ G DE G GPL G V AVIL + GLNDSKK++ KRR L+EEI+EKA++W+ Sbjct: 22 QLICGADEAGAGPLAGPVYAGAVILPEGLILEGLNDSKKVTPKRRDRLFEEIQEKAIAWA 81 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + + EID +NIL+A M AM+ A+ L AP+Y LIDGNR + + VVKGD R Sbjct: 82 VASVDEKEIDAINILNARMKAMEMAIQALKPAPDYALIDGNRDKGITIAHETVVKGDGRS 141 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASILAKV+RD M + ++P+Y F +HKGY T H E L ++G HRRSF Sbjct: 142 ANIAAASILAKVSRDRYMEEMAKLYPEYEFERHKGYGTKLHFELLMKYGPCPIHRRSF 199 >UniRef50_Q2P4B9 Ribonuclease HII n=19 Tax=cellular organisms RepID=RNH2_XANOM Length = 246 Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 100/186 (53%), Positives = 121/186 (65%), Gaps = 2/186 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 LVAGVDE GRGPL G V AAV+ DP +P I GL+DSK+L+ +RR LY I ++AL+WS Sbjct: 36 LVAGVDEAGRGPLAGPVAVAAVVFDPNKPRINGLDDSKQLTAERREQLYARIVDRALAWS 95 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSR 128 + + EID +NI ATML M+RAV G+ + IDGNR PK LP PA A++ GD+ Sbjct: 96 VVLIDSEEIDRINIYQATMLGMRRAVEGVAHVAGFARIDGNRVPKGLPCPAEALIGGDAL 155 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I AASI+AKVTRD M L P+Y F QHKGY T HL L HG HRRSF Sbjct: 156 DRAIMAASIVAKVTRDRLMHELHAQHPEYRFDQHKGYSTPMHLAALQTHGPCPQHRRSFA 215 Query: 189 PVKRAL 194 PV+ AL Sbjct: 216 PVRLAL 221 >UniRef50_D0L036 Ribonuclease n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L036_HALNC Length = 216 Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 97/201 (48%), Positives = 133/201 (66%), Gaps = 13/201 (6%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 + AGVDE GRGPL G VV AA++L P PI G+NDSKKL+E++R+ L++EI +A S+++ Sbjct: 15 IYAGVDEAGRGPLAGPVVAAAIVLYPDDPIVGVNDSKKLTERQRVKLFDEITRRAQSFAI 74 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEY-------VLIDGNRCPKLPMP----- 118 A HEID +NIL A++LAM+RAV ++ + + +DGNRCP L P Sbjct: 75 AEATVHEIDTINILQASLLAMRRAVMAVYDQMKTQGQTLGRIHVDGNRCPDLNDPDAGFM 134 Query: 119 -AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 A++ GD+R I++ASILAKVTRD M +D ++PQY FA+HKGYPTA H + L E Sbjct: 135 ECHALIGGDARDAAIASASILAKVTRDRLMLDMDKLYPQYEFAKHKGYPTARHRDLLIEF 194 Query: 178 GATEHHRRSFGPVKRALGLAS 198 GA HR SF PV+ L ++ Sbjct: 195 GACPEHRSSFAPVRAILSQSN 215 >UniRef50_Q1GD84 Ribonuclease HII n=22 Tax=Alphaproteobacteria RepID=RNH2_SILST Length = 229 Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 101/184 (54%), Positives = 123/184 (66%), Gaps = 2/184 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +AGVDEVGRGPL G V AAV+LD A GLNDSKKL+ +RR AL EI +A S+++ Sbjct: 44 IAGVDEVGRGPLAGPVTAAAVVLDLADLPEGLNDSKKLTPRRRAALEPEIMARA-SYAVA 102 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSRVP 130 A EID NIL A+ LAM+RAVA L P+Y+LIDGN P+ L +PA AVVKGD R Sbjct: 103 HASVEEIDHHNILRASHLAMERAVAALDPQPDYLLIDGNLIPRALHIPAEAVVKGDGRSL 162 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAK RD M L FP YG+ ++ GYP+ H + L + G T HHRRSF PV Sbjct: 163 SIAAASILAKEARDRIMVDLAQQFPGYGWERNAGYPSKQHRDALIKIGVTPHHRRSFKPV 222 Query: 191 KRAL 194 + L Sbjct: 223 HKIL 226 >UniRef50_A6GPG3 Ribonuclease n=1 Tax=Limnobacter sp. MED105 RepID=A6GPG3_9BURK Length = 218 Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 96/197 (48%), Positives = 120/197 (60%), Gaps = 6/197 (3%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + H+ V GVDE GRGPL G VV A +L+ I GL SK LS K+R +L I+ Sbjct: 13 YAEQHSLQVIGVDEAGRGPLCGPVVAGAALLNQPNTIDGLACSKTLSAKKRDSLETAIRR 72 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAV------AGLHIAPEYVLIDGNRCPKLPM 117 A + ++ A EID LNIL A++LAM RAV GL + +DGN+ PK P Sbjct: 73 NAKACAVAHATVEEIDRLNILQASLLAMWRAVDLVLDQTGLKPKQCLIAVDGNKLPKWPY 132 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 A+AVVKGD+++P ISAASILAKV RD + FPQY H GYPTA H+ L EH Sbjct: 133 QAIAVVKGDTKIPAISAASILAKVARDEWCKTHALQFPQYELDIHMGYPTARHMALLLEH 192 Query: 178 GATEHHRRSFGPVKRAL 194 GAT+ HR+SF PV+ AL Sbjct: 193 GATQLHRKSFRPVREAL 209 >UniRef50_B5YFD2 Ribonuclease n=2 Tax=Dictyoglomus RepID=B5YFD2_DICT6 Length = 203 Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 91/184 (49%), Positives = 119/184 (64%), Gaps = 2/184 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 ++ + + +AGVDE GRG L G V + AVIL P I +NDSK L+ + R L+E IK++ Sbjct: 18 LWYYFKYIAGVDEAGRGALAGPVYSGAVILPPFSSIP-VNDSKLLTPREREELFEIIKKE 76 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN-RCPKLPMPAMAVV 123 +L WS G A EI++ IL AT LAM+RAV GL I PEY+LIDGN P + +P VV Sbjct: 77 SLCWSFGYATVEEIEKFGILQATFLAMKRAVEGLEIKPEYLLIDGNIPIPDIDIPQETVV 136 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGD R I++ASI+AKV RD M LD +P+YGF +HKGY T H EK+ + G H Sbjct: 137 KGDRRCLSIASASIVAKVLRDKYMKELDKEYPEYGFGKHKGYATKEHREKIKDLGTLVIH 196 Query: 184 RRSF 187 R+ F Sbjct: 197 RKGF 200 >UniRef50_Q5FFD4 Ribonuclease HII n=5 Tax=Rickettsiales RepID=RNH2_EHRRG Length = 220 Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 87/186 (46%), Positives = 120/186 (64%), Gaps = 5/186 (2%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPAR--PIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 ++ GVDEVG G L G VV+AAV +NDSKKL+ K R +Y +I + + W Sbjct: 28 IIVGVDEVGYGSLAGPVVSAAVFFPNYNNETTQDINDSKKLTPKTRQKIYNKIITR-VKW 86 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGL--HIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 S+G A EIDE NIL+AT +AM+RA+ GL HI +YV+IDGN+ P +P A A++ GD Sbjct: 87 SIGFAHIFEIDEYNILNATHIAMKRALTGLNAHIDIDYVIIDGNKIPNIPWNAQAIIGGD 146 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 + I+AASI+AKVTRD M L I +PQY + ++KGY T H+ L ++G T HHR + Sbjct: 147 TISTSIAAASIIAKVTRDRLMETLHIQYPQYNWNKNKGYGTKDHITSLYKYGKTIHHRNT 206 Query: 187 FGPVKR 192 F P+ + Sbjct: 207 FTPISK 212 >UniRef50_Q4FPF7 Ribonuclease HII n=3 Tax=Bacteria RepID=RNH2_PELUB Length = 186 Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 83/182 (45%), Positives = 124/182 (68%), Gaps = 2/182 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +++AGVDEVGRG L+G V AAVIL+ + L DSK L++ +R L + IK+ ++ W+ Sbjct: 2 KILAGVDEVGRGSLIGPVYAAAVILNNSIDKKLLKDSKTLTKDKREELEKYIKKNSI-WA 60 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA-VVKGDSR 128 +G+A EI+++NILHA++LAM+RA+ L I P VLIDGN+ P L + V+KGD + Sbjct: 61 IGQASTKEIEKINILHASLLAMKRAILKLKIKPSLVLIDGNKLPDLKNYKLEYVIKGDQK 120 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +P ISAASI+AKV+RD + L F YG+ + GY T HL+ + + G T++HR++F Sbjct: 121 IPSISAASIIAKVSRDKFITKLSKEFNNYGWDTNSGYGTKEHLKAIKQFGITKYHRKTFS 180 Query: 189 PV 190 P+ Sbjct: 181 PI 182 >UniRef50_C6QIW2 Ribonuclease n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QIW2_9RHIZ Length = 231 Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 93/185 (50%), Positives = 119/185 (64%), Gaps = 1/185 (0%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +AGVDE GRGP G VV AAVILDP + A ++DSK L E R LY I + A+ +G Sbjct: 26 IAGVDEAGRGPWAGPVVAAAVILDPDKIPANIDDSKTLDEDSRAFLYRRIMKVAIV-GVG 84 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 A+ ID NIL AT+ AM AV+ L P+ VL+DG++ P++PM A+VKGDS+ Sbjct: 85 IADVDRIDRENILGATLWAMAEAVSQLGETPKLVLVDGDKTPRIPMSVRAIVKGDSKCLS 144 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASI+AKVTRD M +P YGF +HKGY T H +A+ G + HRRSF PV+ Sbjct: 145 IAAASIVAKVTRDRLMMDFARAYPGYGFERHKGYGTPEHQAAIAKLGVSALHRRSFRPVQ 204 Query: 192 RALGL 196 ALGL Sbjct: 205 LALGL 209 >UniRef50_Q73G60 Ribonuclease HII n=9 Tax=Rickettsiales RepID=RNH2_WOLPM Length = 198 Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 87/185 (47%), Positives = 123/185 (66%), Gaps = 2/185 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVI-LDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 ++AGVDEVGRGPL G V++AAV+ +D I G+NDSKKL+ + R LYE+I A + Sbjct: 15 VIAGVDEVGRGPLAGPVISAAVVFIDRNTIIDGINDSKKLTPQCRQVLYEKITSVA-KFG 73 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 +G A EI+ NIL AT L+M+RA+ L + +YVL+DGN+ P++ ++V GD+ Sbjct: 74 IGMASVEEINSYNILQATKLSMKRALIDLDLELDYVLVDGNQPPEVKWQVKSIVNGDNLS 133 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AASI+AKVTRD M L P+Y + ++KGY T HL + +G TEHHR++F P Sbjct: 134 TSIAAASIVAKVTRDRLMQELHNKHPEYNWYKNKGYGTKEHLNAIGLYGITEHHRKNFAP 193 Query: 190 VKRAL 194 + RAL Sbjct: 194 ISRAL 198 >UniRef50_A8VRY1 Ribonuclease n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRY1_9BACI Length = 258 Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 91/184 (49%), Positives = 119/184 (64%), Gaps = 3/184 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +L+AGVDEVGRGPL G V A VIL + + GL DSKKLSE +R EI++ A++ Sbjct: 69 RLIAGVDEVGRGPLAGPVTAACVILPESPDLKGLTDSKKLSEAKRHFYAAEIQKVAIAAE 128 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLH--IAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 G A P EID LNI A+ LAM+RAVA + A +++LID P + +P +++KGD+ Sbjct: 129 TGEASPEEIDRLNIYEASKLAMRRAVAAVQQKTAIDFLLIDAMTLP-IDLPQESLIKGDA 187 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 R I+AAS++AKV RD +M LD FP+YG A H GY T HL L EHG HR+SF Sbjct: 188 RSLSIAAASVIAKVERDNQMKELDRAFPEYGLASHMGYGTREHLAALDEHGPQFFHRKSF 247 Query: 188 GPVK 191 PV+ Sbjct: 248 SPVR 251 >UniRef50_Q024M2 Ribonuclease HII n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RNH2_SOLUE Length = 228 Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 90/181 (49%), Positives = 117/181 (64%), Gaps = 3/181 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAGVDEVGRG L GAV AVIL RPI GLNDSK+L +RR L I+E+A++WS+ Sbjct: 28 VAGVDEVGRGALFGAVFAGAVILSEERPIRGLNDSKQLDPERREVLAGRIRERAVAWSIA 87 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGDSRVP 130 + ID +NI A+ +AM+ AV+ L AP+++L+D P + +P A++KGD R Sbjct: 88 AVDASTIDSINIYQASRMAMRIAVSRLSPAPDFLLVDA--VPLEFAVPQRALIKGDERCH 145 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAKV RD M D VFP+YG A HKGY T H + ++G T HR SF PV Sbjct: 146 AIAAASILAKVARDECMRVWDKVFPEYGLASHKGYSTPEHYRAIEQYGPTPLHRLSFEPV 205 Query: 191 K 191 + Sbjct: 206 R 206 >UniRef50_UPI00017443D3 Ribonuclease H n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017443D3 Length = 233 Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 94/184 (51%), Positives = 116/184 (63%), Gaps = 1/184 (0%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA-LSW 68 Q+VAGVDE GRGPL G V AAVIL A L+DSK+L+E RR +Y+E+ +A + W Sbjct: 42 QVVAGVDEAGRGPLAGPVSVAAVILPDDFTHAELHDSKQLTELRRERIYDELMGRADVLW 101 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 E EID +NIL AT + M+RAV GL + P VLIDG P P+P A+VKGD+ Sbjct: 102 CHVMVEVDEIDRINILQATRMGMRRAVQGLSMLPHAVLIDGTPVPDFPVPHRALVKGDAL 161 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+AAS++AKV RD M + +P YGF QHKGY T HLE L HG HRRSF Sbjct: 162 SLSIAAASVIAKVARDRLMRQAALDYPVYGFDQHKGYGTPEHLEALRRHGPCPLHRRSFS 221 Query: 189 PVKR 192 PV + Sbjct: 222 PVSQ 225 >UniRef50_C5D8U9 Ribonuclease HII n=118 Tax=Bacteria RepID=RNH2_GEOSW Length = 277 Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 89/187 (47%), Positives = 118/187 (63%), Gaps = 1/187 (0%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 + +AG+DE GRGPL G VV AAV+L I GLNDSKKLSE +R L+ I+ A+S Sbjct: 72 EYIAGIDEAGRGPLAGPVVAAAVMLPKDAYIPGLNDSKKLSEAKREMLFHMIQSCAISIG 131 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 +G EIDE+NI AT AM +AV L P+Y+LID P + P ++VKGD+ Sbjct: 132 IGVVTAAEIDEMNIYEATKKAMIKAVEQLSPKPDYLLIDAMTLP-ISTPQQSIVKGDANS 190 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+A+SI+AKVTRD M L +PQYGF ++ GY TA HLE + +G + HRRSF P Sbjct: 191 VSIAASSIIAKVTRDHFMKQLAKQYPQYGFEKNMGYGTAQHLEAIRVYGTIDEHRRSFSP 250 Query: 190 VKRALGL 196 +K + + Sbjct: 251 IKEMIEM 257 >UniRef50_C3MHC0 Ribonuclease HII n=12 Tax=Alphaproteobacteria RepID=RNH2_RHISN Length = 231 Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 95/183 (51%), Positives = 114/183 (62%), Gaps = 2/183 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG DE GRGPL G VV AAVILDP GLNDSK L+ ++R AL+ EI A + S+ Sbjct: 35 VAGADEAGRGPLAGPVVAAAVILDPDAVPGGLNDSKLLTAEQREALFTEIMATA-TVSIA 93 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSRVP 130 + ID +IL A++ AM+RA+ GL IA + LIDG P+ LP A A+VKGDSR Sbjct: 94 SSSAAHIDATDILKASLDAMRRAIDGLSIAARFALIDGRDVPQGLPCHAKAIVKGDSRSV 153 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASI+AKVTRD MA D FP YGFA H GY T H + HG HR SF P Sbjct: 154 SIAAASIVAKVTRDRMMARADATFPAYGFALHAGYATVRHRSAIDSHGPCSLHRMSFRPF 213 Query: 191 KRA 193 + A Sbjct: 214 REA 216 >UniRef50_A0LV66 Ribonuclease HII n=41 Tax=Actinomycetales RepID=RNH2_ACIC1 Length = 307 Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 96/186 (51%), Positives = 114/186 (61%), Gaps = 2/186 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL--DPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDE GRG G +V AAVIL D IAGL DSK+L+ R ++Y EI +AL+WS Sbjct: 46 VAGVDEAGRGACAGPLVVAAVILGSDRRNRIAGLADSKQLTPAARESIYNEIISRALAWS 105 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + E+DEL + A + M+RAVAGL + P YVL DG L P +AV KGD V Sbjct: 106 VVVIPSSEVDELGVHAANITGMRRAVAGLAVRPAYVLTDGFSIAGLNAPGLAVCKGDEAV 165 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AAS++AKVTRD M L FP Y FA HKGY TA H LA HG HRRSF Sbjct: 166 ACIAAASVVAKVTRDRLMVELHEKFPMYEFATHKGYVTAGHRAALARHGPCPEHRRSFVT 225 Query: 190 VKRALG 195 V+RA G Sbjct: 226 VRRAGG 231 >UniRef50_B0K1U0 Ribonuclease n=12 Tax=Bacteria RepID=B0K1U0_THEPX Length = 242 Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 84/180 (46%), Positives = 119/180 (66%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 + +AGVDE GRGPLVG VV A VIL I +NDSKKLSE++R L E IK+ A+S Sbjct: 56 NLNFIAGVDEAGRGPLVGPVVAACVILPKEVFIPEINDSKKLSEEKREVLSEVIKKVAIS 115 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 +++G + EID++NIL+AT AMQ A++ + +Y+L+D P++ + A+VKGDS Sbjct: 116 YAIGIVDCEEIDKINILNATYKAMQIAISKIQQKIDYLLVDAITIPQIEINQKAIVKGDS 175 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + I+AASILAKV RD M ++PQY F ++KGY T H+E L ++G HR++F Sbjct: 176 KSISIAAASILAKVERDKIMKEYHKIYPQYNFEKNKGYGTKEHIEALKKYGPCPIHRKTF 235 >UniRef50_Q6MDG7 Ribonuclease HII n=11 Tax=Chlamydiales RepID=RNH2_PARUW Length = 222 Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 88/186 (47%), Positives = 113/186 (60%), Gaps = 1/186 (0%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK-EKALSW 68 QL+AG+DE GRGPL G VV AA IL + +NDSKKLS K R L+E + + A+ + Sbjct: 29 QLIAGIDEAGRGPLAGPVVAAACILPKGLLVPQINDSKKLSPKVRERLFERLTTDSAVRY 88 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 +G EID +NI AT+LAM A+ L + P+YVL+DG P +P + ++KGD Sbjct: 89 GIGIIGQAEIDRVNIYQATILAMLMAIQQLPVTPDYVLVDGMNLPHPDLPCLKIIKGDQL 148 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+AASI+AK TRD M +P YGF QHKGY T HLE L + G HRRSF Sbjct: 149 SQSIAAASIIAKETRDRLMCQYHREWPGYGFNQHKGYATELHLEALFKQGPCPIHRRSFD 208 Query: 189 PVKRAL 194 P+K L Sbjct: 209 PIKSML 214 >UniRef50_D1BMP6 Ribonuclease n=3 Tax=Veillonella RepID=D1BMP6_VEIPT Length = 265 Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 92/180 (51%), Positives = 118/180 (65%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAGVDEVGRGP+ G V AAVIL P I GLNDSKKL+E++R ALY+ I ++A++ S Sbjct: 77 VAGVDEVGRGPIAGPVTVAAVILPPMTLIPGLNDSKKLTEEKREALYDIIMDEAVAVSCI 136 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 P +IDELNI T AM A+ L + E V+ D + P L +P +++KGDS+ Sbjct: 137 SYGPEKIDELNIYEVTRQAMYEAIRTLSVPAEAVVADAMKLPDLTIPVESIIKGDSKSAN 196 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASI+AKVTRD M +LD FP YGF HKGY T H E + + G T HR+SF P+K Sbjct: 197 IAAASIIAKVTRDRYMKSLDDEFPGYGFGIHKGYYTELHKEAIEQQGVTPLHRKSFEPIK 256 >UniRef50_Q0AWX1 Ribonuclease HII n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RNH2_SYNWW Length = 255 Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 87/182 (47%), Positives = 116/182 (63%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 + +AG+DE GRGP+ G V+ AAVIL G+NDSKKL+ +R L EIK++A+SWS Sbjct: 58 RYIAGIDEAGRGPIAGPVMAAAVILSRDFFCPGINDSKKLTALKRSKLAAEIKKQAISWS 117 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + P +D++NIL+AT AM AV L PE++LID + P + + ++KGDS Sbjct: 118 VAAVFPSYLDKVNILNATREAMLLAVKNLSPRPEFLLIDAVQLPDIDIKQYPLIKGDSLS 177 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AASILAKV RD M A D ++P YGF++HKGY T HL+ L G HR SF P Sbjct: 178 VSIAAASILAKVERDRVMEAFDSLYPGYGFSRHKGYATREHLQSLLRLGTCALHRVSFEP 237 Query: 190 VK 191 VK Sbjct: 238 VK 239 >UniRef50_A3DDG7 Ribonuclease HII n=6 Tax=Bacteria RepID=RNH2_CLOTH Length = 256 Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 83/178 (46%), Positives = 117/178 (65%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +L+AG+DE GRGPL G VV AAVIL I GLNDSKKL+E +R L++ I +KA+ Sbjct: 73 KLIAGIDEAGRGPLAGPVVAAAVILPQDVFIEGLNDSKKLTENQREKLFDVINDKAIGVG 132 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 +G + +IDE+NIL+AT AM+ AV L P+ + ID + + + ++VKGD++ Sbjct: 133 IGIVDEKQIDEINILNATKKAMKLAVGNLKPVPDILFIDSLKLDDINIEQNSIVKGDAKS 192 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASI+AKVTRD + +D +P YGFA+HKGY T H+E + ++G HR SF Sbjct: 193 VSIAAASIIAKVTRDRILREMDKKYPMYGFARHKGYGTGEHIEAIKKYGICPIHRVSF 250 >UniRef50_Q043R9 Ribonuclease HII n=22 Tax=Firmicutes RepID=RNH2_LACGA Length = 250 Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 91/185 (49%), Positives = 119/185 (64%), Gaps = 1/185 (0%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 + +QLVAGVDEVGRGPL G VVTAAVIL + +NDSKKLS K+R L+ +I KA Sbjct: 62 WQKSQLVAGVDEVGRGPLAGPVVTAAVILPHNFDLIDVNDSKKLSPKKRKELFPKILAKA 121 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 +S S+G A ID +NI A LAM AV GL + P+ +L+D P L +P + ++ G Sbjct: 122 VSVSVGLANNDVIDRINIYEADRLAMAHAVQGLKVKPDALLVDAMNVP-LNIPQVKLIHG 180 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D++ I+AASI+AKV RD M A V+P+Y F + GY T H+E L ++G T HRR Sbjct: 181 DAKSNSIAAASIVAKVFRDNLMDAYGEVYPEYDFKHNAGYGTREHMEALKKYGPTPIHRR 240 Query: 186 SFGPV 190 SF PV Sbjct: 241 SFAPV 245 >UniRef50_Q2S009 Ribonuclease HII n=1 Tax=Salinibacter ruber DSM 13855 RepID=RNH2_SALRD Length = 200 Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 88/180 (48%), Positives = 115/180 (63%), Gaps = 4/180 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG+DE GRG L G VV AAVI+ P I + DSK LSE +RL I+++A++ S+ Sbjct: 16 VAGLDEAGRGCLAGPVVAAAVIMPPQVEITAIQDSKALSEGQRLDARATIEDEAVAASIA 75 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK----LPMPAMAVVKGDS 127 R P EID+ NIL A + AM+RA +G P++VL+DGN+ + P P VVKGD+ Sbjct: 76 RCSPTEIDDRNILQAALEAMRRAASGCRPPPDFVLVDGNQWDRNLVDAPWPHETVVKGDA 135 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + I+AASILAK RDA M L P+Y +A + GYPT H + L EHGAT HHR+SF Sbjct: 136 KSQSIAAASILAKTERDALMRDLHEAHPEYDWASNVGYPTQQHYDALREHGATPHHRQSF 195 >UniRef50_D0NJ61 Ribonuclease n=1 Tax=Phytophthora infestans T30-4 RepID=D0NJ61_PHYIN Length = 249 Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 89/187 (47%), Positives = 122/187 (65%), Gaps = 7/187 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK-ALSWSL 70 V GVDE GRGPL G VV AA + IAG++DSKK+ E +R AL+E + +++++ Sbjct: 47 VIGVDEAGRGPLAGPVVAAACHVPLDVTIAGIDDSKKILEPQREALFELLTSHPNITYAV 106 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGL-----HIAPEYVLIDGNRCP-KLPMPAMAVVK 124 P ID++NIL A++ +M ++V + +VL+DGN+ P L +PA AVVK Sbjct: 107 HVNSPQRIDDINILQASLESMTKSVNEVAQQLQQKDKTFVLVDGNKLPPTLELPAEAVVK 166 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GDS+V I+AASI+AKVTRD M D+ FPQYG AQHKGYPT H+ +A+HG E HR Sbjct: 167 GDSKVYSIAAASIIAKVTRDRLMREYDVKFPQYGLAQHKGYPTRDHVAAIAKHGPCEIHR 226 Query: 185 RSFGPVK 191 +F P+K Sbjct: 227 MTFAPLK 233 >UniRef50_Q03S83 Ribonuclease HII n=39 Tax=Lactobacillaceae RepID=RNH2_LACBA Length = 257 Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 93/183 (50%), Positives = 127/183 (69%), Gaps = 1/183 (0%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG+DEVGRGPL G VVT+AVIL P I +NDSK+L+ K R LY I +A S S+G Sbjct: 74 VAGIDEVGRGPLAGPVVTSAVILPPDFDIPLVNDSKQLTAKERERLYPLILAQAQSVSIG 133 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 P ID++NI AT +AMQRAV GL +AP+ +++D + P + +P + ++KGD++ Sbjct: 134 IGSPALIDQINIYQATRVAMQRAVLGLGLAPQQLIVDAMQIP-VDVPQIRLIKGDAKSAS 192 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 ++AASI+AKV RD MA D ++P YGFAQ+ GY TA HL+ LA+ G T HRR+F PV+ Sbjct: 193 VAAASIVAKVYRDHLMATYDELYPGYGFAQNAGYGTAEHLQGLADRGVTPIHRRTFSPVQ 252 Query: 192 RAL 194 + L Sbjct: 253 KIL 255 >UniRef50_A5D1I3 Ribonuclease HII n=4 Tax=Bacteria RepID=RNH2_PELTS Length = 266 Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 91/182 (50%), Positives = 113/182 (62%), Gaps = 2/182 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPAR--PIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDE GRGPL G VV AAVIL P +AGLNDSKKL+ +R L IK+ AL+WS Sbjct: 75 VAGVDEAGRGPLAGPVVAAAVILPPVADLALAGLNDSKKLNPSKRAELAARIKKVALAWS 134 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 G + EI NI A++ AM+RAV L I P Y+L+DG R +L +P +A+ GD Sbjct: 135 AGISTVEEIFNENIHAASLTAMRRAVLKLKIRPAYLLVDGYRISRLELPQLALTGGDGLS 194 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 ++AASILAKV RD M + +PQYGF +HKGY T HL L +G HR + P Sbjct: 195 ASVAAASILAKVLRDRLMDFYHVQYPQYGFNRHKGYATPEHLAALERYGPCPLHRAGYRP 254 Query: 190 VK 191 VK Sbjct: 255 VK 256 >UniRef50_Q3AP34 Ribonuclease HII n=7 Tax=Chlorobiaceae RepID=RNH2_CHLCH Length = 206 Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 94/191 (49%), Positives = 120/191 (62%), Gaps = 6/191 (3%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVIL----DPARPIAGL-NDSKKLSEKRRLAL 57 E ++ H + + G+DEVGRGPL G VV AAV+ P + L NDSKKLS K R +L Sbjct: 7 EPLWQHYEFICGIDEVGRGPLAGPVVAAAVVFPRWFQPTEALLTLLNDSKKLSAKERESL 66 Query: 58 YEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLP 116 IK +AL W+L + + IDE+NIL ATMLAM AV L I P +L+DGNR L Sbjct: 67 VPAIKAQALHWALAEVQHNVIDEVNILQATMLAMNNAVKALPIIPSLLLVDGNRFTTDLA 126 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 +P +VKGDS V I+AAS+LAKV RDA M +P YGF +H GYPT+ H+E + + Sbjct: 127 IPYKTIVKGDSHVFSIAAASVLAKVHRDALMCVYATHYPHYGFERHAGYPTSAHIEAIRQ 186 Query: 177 HGATEHHRRSF 187 HG HR+SF Sbjct: 187 HGRCPIHRQSF 197 >UniRef50_Q2B7D6 Ribonuclease n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B7D6_9BACI Length = 255 Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 86/181 (47%), Positives = 114/181 (62%), Gaps = 1/181 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 ++AG DE GRGPL G V+ AAVIL + GL+DSKKLSE +R Y+EI A + + Sbjct: 73 MIAGTDEAGRGPLAGPVIAAAVILPEGFYLPGLDDSKKLSEAKRDEFYKEIMSGASAVGI 132 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 GR EID +NIL A+ AM A+A + P+Y+L D +P A AV+KGDS+ Sbjct: 133 GRISAGEIDRINILQASKKAMLLALADMGSTPDYLLTDAVDLD-VPYQAEAVIKGDSKSV 191 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AAS++AKVTRD M LD +P YGF ++ GY T HLE + +HG HR+SF P+ Sbjct: 192 TIAAASVIAKVTRDRYMRELDEQYPHYGFGRNMGYGTRQHLEAIEKHGIINEHRKSFAPI 251 Query: 191 K 191 K Sbjct: 252 K 252 >UniRef50_B1GZ18 Ribonuclease HII n=11 Tax=Bacteria RepID=RNH2_UNCTG Length = 210 Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/181 (50%), Positives = 110/181 (60%), Gaps = 1/181 (0%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG+DE GRGPL G VV A VIL I LNDSK+LSEK+R L+E IKE AL +++ Sbjct: 20 VAGIDEAGRGPLAGPVVAAVVILPKDSAIPYLNDSKQLSEKKREILFEIIKETALDYAVE 79 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKGDSRVP 130 IDE+NIL AT LAM RAV L P+ LIDGNR L +V GD++ Sbjct: 80 LVNNEIIDEINILQATFLAMSRAVLKLKTQPDLYLIDGNRKVHGLSFNQETIVGGDAKSA 139 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAKV+RD M +P Y F +HKGY T H+E L +HG HR +F PV Sbjct: 140 CIAAASILAKVSRDKMMLEYAKQYPVYEFEKHKGYGTKKHIEALKKHGICPIHRLTFSPV 199 Query: 191 K 191 Sbjct: 200 N 200 >UniRef50_Q1JGT2 Ribonuclease HII n=78 Tax=Firmicutes RepID=RNH2_STRPD Length = 263 Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/185 (47%), Positives = 117/185 (63%), Gaps = 4/185 (2%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 Q +AG+DEVGRGPL G VV A VIL I GLNDSKK+ + + +Y+ +KEKAL+ Sbjct: 71 QAIAGIDEVGRGPLAGPVVAACVILPQHCKIKGLNDSKKIPKSKHETIYQAVKEKALAIG 130 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLH---IAPEYVLIDGNRCPKLPMPAMAVVKGD 126 +G + IDE+NI AT LAM A+ L P+Y+LID + + +++KGD Sbjct: 131 IGIIDNQLIDEVNIYEATKLAMLEAIKQLEGQLTQPDYLLIDAMTL-DIAISQQSILKGD 189 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 + I+AASI+AKVTRD MA D +FP YGFA++ GY T HL+ L +G T HR+S Sbjct: 190 ANSLSIAAASIVAKVTRDQMMANYDRIFPGYGFAKNAGYGTKEHLQGLKAYGITPIHRKS 249 Query: 187 FGPVK 191 F PVK Sbjct: 250 FEPVK 254 >UniRef50_Q2GD69 Ribonuclease HII n=2 Tax=Neorickettsia RepID=RNH2_NEOSM Length = 195 Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 97/197 (49%), Positives = 122/197 (61%), Gaps = 10/197 (5%) Query: 4 FVYPHTQ--LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 VY ++ L+AGVDEVGRG L G VV AVIL I G DSK LS RL+ YEEI Sbjct: 1 MVYRKSENGLIAGVDEVGRGCLAGPVVACAVILTENLAIPG--DSKVLSRAVRLSWYEEI 58 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDG----NRCPKLPM 117 + + ++G + EI+ +NIL+AT+LAM+RA+ L + P VLIDG N K Sbjct: 59 ISNSYN-AIGMSSVKEIETMNILNATLLAMERALERLPVVPTTVLIDGRDIINNAAKYK- 116 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 +VV GD EI AASI+AKVTRD M LD+ +P Y + +KGY T HLE LA++ Sbjct: 117 EVKSVVSGDKIYGEIKAASIVAKVTRDRLMEGLDLTYPYYRWKFNKGYGTKEHLEALAKY 176 Query: 178 GATEHHRRSFGPVKRAL 194 G T+HHRR F PVKR L Sbjct: 177 GVTDHHRRKFAPVKRML 193 >UniRef50_C0GQX3 Ribonuclease n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQX3_9DELT Length = 214 Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 93/175 (53%), Positives = 111/175 (63%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGR 72 AG+DE GRG L G VV A V+L IA L DSKK++ K R +L EIK L+WSLG Sbjct: 23 AGLDEAGRGCLAGPVVAAVVVLPLDAQIARLTDSKKITSKVRESLIPEIKSTCLAWSLGL 82 Query: 73 AEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEI 132 A P EID +NIL ATM AM+RAV L + P +L+DGN+ L +P +V GD P I Sbjct: 83 AWPREIDRINILQATMTAMKRAVLHLGLTPGQLLVDGNQKIPLNIPQKCIVGGDMTEPCI 142 Query: 133 SAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 SAASILAK RD M LD +P YGF QHKGY T HL+ L GA+ HR+SF Sbjct: 143 SAASILAKTFRDMLMTKLDRRYPGYGFGQHKGYGTRKHLQALKSLGASPMHRKSF 197 >UniRef50_D1C7S7 Ribonuclease n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7S7_SPHTD Length = 233 Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 98/184 (53%), Positives = 120/184 (65%), Gaps = 3/184 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPA-RPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 +LVAGVDEVGRG + G VV AA IL P I G+ DSK LS ++R L EEI+ AL Sbjct: 39 RLVAGVDEVGRGCVAGPVVAAACILPPGIEDIPGVRDSKTLSARQRERLAEEIRRVALGI 98 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL-PMPAMAVVKGDS 127 LG A EID+ NI A+ LAM+RA+A L A ++VL DG P+L P MAVVKGD+ Sbjct: 99 GLGAASRREIDQYNIRQASALAMRRALARLG-AWDFVLYDGRPLPELDPERTMAVVKGDA 157 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+ ASILAKVTRDA MA L P+YG+ ++ GY TA HL+ L G T HHRR+F Sbjct: 158 SCLSIACASILAKVTRDALMARLARRHPEYGWERNAGYGTAEHLDALLRVGPTPHHRRTF 217 Query: 188 GPVK 191 PV+ Sbjct: 218 APVR 221 >UniRef50_C0GHM4 Ribonuclease n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHM4_9FIRM Length = 260 Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 88/176 (50%), Positives = 115/176 (65%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +AGVDE GRGPL G VV AVIL +AGLNDSKKL+ ++R LYE I +A++WS+G Sbjct: 78 IAGVDEAGRGPLAGPVVAGAVILPDNFFLAGLNDSKKLTPQKREELYEAITSEAVAWSVG 137 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 E EID++NIL A+ LAM RA+ L + P+Y L+D +LP VV GD Sbjct: 138 IGEVWEIDDINILQASKLAMYRALLTLSVKPDYALLDALELEELPFAQQGVVGGDGLSLS 197 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AAS++AKVTRD M + ++P YGF+ HKGYPTA H +A+ G HR+SF Sbjct: 198 IAAASVVAKVTRDRLMCEQEKMYPGYGFSLHKGYPTAEHRSAIAKLGPCPIHRKSF 253 >UniRef50_Q03Y48 Ribonuclease HII n=10 Tax=Lactobacillales RepID=RNH2_LEUMM Length = 253 Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 91/184 (49%), Positives = 118/184 (64%), Gaps = 1/184 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L+AGVDEVGRGPL G VV AAVIL + + DSK+LS K+R LY++I EKA+S + Sbjct: 71 LIAGVDEVGRGPLAGPVVAAAVILPHDFDVLDVIDSKQLSAKKRDELYDKIIEKAISIGV 130 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 GR E IDE+NI A +AM AV L PE +LID R L +P ++KGD+R Sbjct: 131 GRVEASIIDEINIYEAARVAMTEAVNQLAPIPEALLIDAMRL-DLDLPQEFLIKGDARSN 189 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I AASI+AKVTRD MA+ + +P YGF ++ GY T HLE + + G T HR++F P+ Sbjct: 190 SIGAASIIAKVTRDRLMASYGLKYPGYGFEKNAGYGTKEHLEGIKKIGITPIHRKTFAPI 249 Query: 191 KRAL 194 K L Sbjct: 250 KDIL 253 >UniRef50_D2MIZ6 Ribonuclease HII n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIZ6_9BACT Length = 216 Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 89/183 (48%), Positives = 113/183 (61%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG+DE GRGPL G VV AAVI+ + L+DSKK+S R AL+ I E A +W +G Sbjct: 29 VAGLDEAGRGPLAGPVVGAAVIVPRRFSLRSLDDSKKVSPTEREALFSVITESATAWGIG 88 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 A EID LN+L AT LA QRA+ L I P+++L+DG+ + +P +V+ GD Sbjct: 89 VASEAEIDSLNVLRATWLAWQRAINQLRIPPDFLLVDGHLGADVFIPHRSVIHGDRLSSS 148 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASILAKV RD M P+Y F HKGYPT HL L + G + HR SFGPV+ Sbjct: 149 IAAASILAKVFRDRIMCEYHERDPRYRFHIHKGYPTPEHLRLLRQFGPSPVHRHSFGPVR 208 Query: 192 RAL 194 R L Sbjct: 209 RCL 211 >UniRef50_D1R4X2 Ribonuclease n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4X2_9CHLA Length = 232 Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 88/183 (48%), Positives = 115/183 (62%), Gaps = 1/183 (0%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK-ALSW 68 +LVAGVDE GRGPL G VV AA IL P + G+NDSKKL+ ++R L++EI + + Sbjct: 38 KLVAGVDEAGRGPLAGPVVAAACILPPRFRVPGVNDSKKLTPQKRAQLFQEITTHPKVIY 97 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 +G ID +NIL AT+ AM AV L P+ +L+DG + P +P ++ GDS Sbjct: 98 GVGIVATEIIDTINILQATIQAMLDAVNQLSSQPQALLVDGLQLPHPVIPCQKLIHGDSL 157 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+AASI+AK TRD M LD +P YGFAQHKGY T HL+ L EHG HR++F Sbjct: 158 SLCIAAASIIAKETRDRLMVELDQQWPAYGFAQHKGYGTQQHLDALREHGPCPIHRKTFE 217 Query: 189 PVK 191 P+K Sbjct: 218 PIK 220 >UniRef50_C7RDQ2 Ribonuclease n=6 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDQ2_ANAPD Length = 209 Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 87/183 (47%), Positives = 113/183 (61%), Gaps = 1/183 (0%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 V+ +L+AG+DEVGRGPL G VVT AVI+ I G+ DSKKL+ K+ L+L E+I + Sbjct: 14 VHEDYELIAGIDEVGRGPLAGPVVTCAVIMKRDSNIGGVTDSKKLTRKKMLSLKEKILDD 73 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A+ ++ G A P IDELNI +AT AM+ A+ L I PE VLID R +P M +VK Sbjct: 74 AIDFAYGYANPSLIDELNIKNATHKAMEDALNKLKIRPEIVLIDAERI-NTDIPQMNIVK 132 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD IS ASILAKV RD M ++P Y F + GY T H E L ++G T HR Sbjct: 133 GDLNEYVISCASILAKVRRDDIMINFSKIYPGYSFETNMGYGTKKHYEGLEKYGETPIHR 192 Query: 185 RSF 187 ++F Sbjct: 193 QTF 195 >UniRef50_C8PZH5 Ribonuclease n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZH5_9GAMM Length = 240 Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 91/222 (40%), Positives = 128/222 (57%), Gaps = 40/222 (18%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPA------------------------RPIAGLNDS 46 + GVDEVGRGPL+G VV A+I D A P++ L DS Sbjct: 5 FIIGVDEVGRGPLLGDVVVCALIFDKAILSIKEDSLSTDLPTADSVSISHNHPLSALTDS 64 Query: 47 KKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL--HIAPEY 104 KKLSEK+R AL+ I++ A + + + ID+LNIL AT+L M++AVAG+ + +Y Sbjct: 65 KKLSEKKREALFSLIEQTASAHQVVKISASLIDQLNILQATLLGMKQAVAGVMAQMLAQY 124 Query: 105 ------VLIDGNRCPKL-PMPA-------MAVVKGDSRVPEISAASILAKVTRDAEMAAL 150 V++DGN+ P L +P A+VKGD + IS AS++AKVTRD +M AL Sbjct: 125 PTATFSVMVDGNKLPVLFDLPNYQQITHEQAIVKGDGKHACISGASVIAKVTRDRDMVAL 184 Query: 151 DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKR 192 ++P YG QHKGYPTA H++ + +G HR+SF P+K+ Sbjct: 185 SKLYPDYGIEQHKGYPTAAHIQAIEHYGILPMHRKSFAPIKQ 226 >UniRef50_Q8YP68 Ribonuclease HII n=19 Tax=Cyanobacteria RepID=RNH2_ANASP Length = 225 Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/186 (48%), Positives = 114/186 (61%), Gaps = 5/186 (2%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 LVAGVDEVGRG L G VV A+VIL P A + DSKKLS RR+ L ++I A+ Sbjct: 36 LVAGVDEVGRGALFGPVVAASVILPASAFPHLMTAEIKDSKKLSHSRRVQLAQQISTLAI 95 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKG 125 W +G A EID +NIL AT+LAM+R+V L + P LIDGN+ L M +VKG Sbjct: 96 DWRIGYATTAEIDRINILQATLLAMKRSVKKLKLQPILCLIDGNQPVQDLLMLQQTIVKG 155 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D R I+AASI+AKV RD + L +P Y +KGY + HL LA+HGA+ HR+ Sbjct: 156 DERSLNIAAASIMAKVWRDDLIQRLATKYPMYDLKSNKGYGSKKHLLALAQHGASPLHRQ 215 Query: 186 SFGPVK 191 SF P + Sbjct: 216 SFRPCQ 221 >UniRef50_C9KJR4 Ribonuclease n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJR4_9FIRM Length = 259 Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/182 (51%), Positives = 121/182 (66%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 ++VAGVDE GRGPL G V AAVIL + LNDSKKLS K R L++EI+EKA++ Sbjct: 70 EIVAGVDEAGRGPLAGPVSVAAVILPHDLCLPKLNDSKKLSAKVREELFDEIQEKAIAVG 129 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + ID +NI AT+ M A+ L AP+ VLID +LPMP+ +++KGD++ Sbjct: 130 TALIDAQTIDRVNIYQATINGMYEAIFSLQPAPQEVLIDAVPLDRLPMPSESIIKGDAKS 189 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 ISAASI+AKVTRD M D ++P+YGFAQHKGY TA H+E L ++G HRRSF P Sbjct: 190 ASISAASIIAKVTRDRLMDEYDKIYPEYGFAQHKGYGTAQHIEALKKYGPCPIHRRSFEP 249 Query: 190 VK 191 V+ Sbjct: 250 VR 251 >UniRef50_A5UX01 Ribonuclease HII n=8 Tax=Chloroflexi RepID=RNH2_ROSS1 Length = 227 Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 89/184 (48%), Positives = 113/184 (61%), Gaps = 5/184 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL-----DPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 +AG+DE GRG L G VV AAVIL D + G+ DSK LS +R L+E I A+ Sbjct: 22 IAGLDEAGRGCLAGPVVAAAVILPDAVIDTPDVLDGVADSKMLSPAQRADLFERITSLAV 81 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 +W++G H ID IL AT LAMQ A+ L + +LID P+P A++KGD Sbjct: 82 AWAVGATPAHIIDSHGILPATRLAMQVALLRLPRPADALLIDAVTLDNWPLPQRALIKGD 141 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 +R I+AASI+AKVTRD M ALD +PQYGFA HKGY T H + L +G T HHRR+ Sbjct: 142 ARCLSIAAASIIAKVTRDRLMDALDACWPQYGFASHKGYGTVQHQQALRRYGPTPHHRRT 201 Query: 187 FGPV 190 F P+ Sbjct: 202 FRPL 205 >UniRef50_Q49X31 Ribonuclease HII n=55 Tax=Staphylococcus RepID=RNH2_STAS1 Length = 256 Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 79/181 (43%), Positives = 113/181 (62%), Gaps = 1/181 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L+ G+DEVGRGPL G VVT AVIL+ GLNDSKKLS K+R ++ ++ +++ Sbjct: 73 LICGIDEVGRGPLAGPVVTCAVILNKNHHFTGLNDSKKLSAKQRHSIESKLLNDVYAYAY 132 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A EIDE+NI AT LAM RA+ GL I P ++L+D + +P +++KGD++ Sbjct: 133 GYASVEEIDEINIYEATKLAMHRAIEGLRIKPTHLLVDA-MTLDIDIPQTSLIKGDAKSV 191 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AAS+LAK RD M L +P Y F + GY T HL+ + ++G HR++F P+ Sbjct: 192 SIAAASVLAKEHRDQYMRDLGRKYPGYSFENNVGYGTQQHLDGIKKYGILNEHRKTFEPI 251 Query: 191 K 191 K Sbjct: 252 K 252 >UniRef50_D1Q046 Ribonuclease n=2 Tax=Prevotella RepID=D1Q046_9BACT Length = 226 Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 88/211 (41%), Positives = 118/211 (55%), Gaps = 23/211 (10%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 M++ Y + AG DE GRG L G+V AAVIL NDSK+LS+K+R AL E+ Sbjct: 1 MLQNSYNPHLIEAGCDEAGRGCLAGSVFAAAVILPKDYDNPDFNDSKQLSKKKRYALREQ 60 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-------- 112 I A++W++G P EID +NILHA+ LAM RA+ L + PE ++IDGNR Sbjct: 61 IIRDAVAWAVGIVTPAEIDRINILHASFLAMHRAIDQLAVRPEALIIDGNRFDPYKPLSE 120 Query: 113 -------------PKLP--MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQY 157 P P +P +VKGD + I+AASILAK RD M L + +P Y Sbjct: 121 NATEGRKERVVTRPDDPAVLPWQCIVKGDGKYQNIAAASILAKTFRDDYMDELHLQYPMY 180 Query: 158 GFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 + +KGYPT H E +A +G T HR+S+ Sbjct: 181 HWNSNKGYPTRIHREAIARYGITPFHRKSYN 211 >UniRef50_B8CW25 Ribonuclease n=1 Tax=Halothermothrix orenii H 168 RepID=B8CW25_HALOH Length = 308 Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 86/182 (47%), Positives = 122/182 (67%), Gaps = 1/182 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 +AGVDE GRGPL G VV AAV+ P + GL+DSKKL+ K R L+EEI ++ALS + Sbjct: 74 FIAGVDEAGRGPLAGPVVAAAVVFKPETKVLGLDDSKKLTAKERETLFEEIYDRALSIGV 133 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDG-NRCPKLPMPAMAVVKGDSRV 129 G + +ID+LNIL+A++ AM++A+ L +Y+LIDG N+ +L + AV+ GD++V Sbjct: 134 GIVDNKDIDKLNILNASLKAMKKALDSLSCPVDYILIDGKNKLSELNIKQQAVIDGDNKV 193 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AASI+AKVTRD + L +P+YGF +KGY T H+E L +G + HR SF Sbjct: 194 NVIAAASIIAKVTRDRILDKLHKKYPEYGFINNKGYGTREHIEALKAYGPSPIHRYSFSL 253 Query: 190 VK 191 V+ Sbjct: 254 VR 255 >UniRef50_Q1MRU8 Ribonuclease HII n=2 Tax=Desulfovibrionales RepID=RNH2_LAWIP Length = 224 Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 91/200 (45%), Positives = 121/200 (60%), Gaps = 13/200 (6%) Query: 3 EFVYPHTQLV-AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 E VY + L+ AG+DEVGRG L G VV AVIL I GL DSK +S RR L ++I Sbjct: 23 ELVYDNLSLLTAGLDEVGRGCLAGPVVAGAVILPDTISIDGLADSKTISSNRRYILAKKI 82 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PK------ 114 E A+SW +G P EIDE+NIL A++ AM A L PE +LIDGN+ P+ Sbjct: 83 YETAISWGIGVVWPKEIDEINILQASLKAMAHAATVLKTFPELLLIDGNKAIPQKFFIQF 142 Query: 115 ----LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFH 170 LP+ +++KGD+ +P ISAASI+AK RD M+ LD +PQY F+++KGY + H Sbjct: 143 GWNFLPI-QHSIIKGDASIPAISAASIIAKTFRDTLMSKLDKRYPQYNFSKNKGYGSKTH 201 Query: 171 LEKLAEHGATEHHRRSFGPV 190 E L + G + HR +F V Sbjct: 202 REILQKIGPSPIHRMTFKGV 221 >UniRef50_B5EBC6 Ribonuclease HII n=5 Tax=Deltaproteobacteria RepID=RNH2_GEOBB Length = 230 Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 86/183 (46%), Positives = 115/183 (62%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +AG+DE GRGPL G VV AAV+L + G+NDSK+L+E++R L++ I +AL+ +G Sbjct: 30 IAGIDEAGRGPLAGPVVAAAVMLPAGLLLPGVNDSKQLTEEKREELFDVIHREALAVGVG 89 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 + +D +NIL AT+ AM+ AV L I P ++LIDG + +P V KGDS Sbjct: 90 IGDHALVDSINILQATLSAMRDAVRALSITPGFLLIDGISNIPMNIPQRTVKKGDSLSLS 149 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASI+AKVTRD M D +P YGFA HKGY A HL +AE G HR++F VK Sbjct: 150 IAAASIIAKVTRDRMMVEYDAQYPGYGFASHKGYGAASHLAAIAELGPCPIHRKTFSGVK 209 Query: 192 RAL 194 L Sbjct: 210 EHL 212 >UniRef50_B9M597 Ribonuclease HII n=3 Tax=Deltaproteobacteria RepID=RNH2_GEOSF Length = 216 Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 85/181 (46%), Positives = 114/181 (62%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +AGVDE GRGPL G VV AAVIL ++ ++DSKKL+ +R L+E I AL+ +G Sbjct: 29 LAGVDEAGRGPLAGPVVAAAVILPAGIGLSEVDDSKKLTSGKRDELFEVIMANALAVGVG 88 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 ++ ID +NIL AT+ AM+ A++ L I P+YVL+DG + +P + KGD Sbjct: 89 LSDAGVIDRINILQATLAAMKEALSLLFIKPDYVLVDGISKIPVTIPQKTIKKGDGTSLS 148 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASI+AKV RD M + D FPQYGFA HKGY HL+ +AE+G HR +F VK Sbjct: 149 IAAASIVAKVHRDRLMVSYDAEFPQYGFAAHKGYGCVDHLKAIAEYGPCPIHRMTFSGVK 208 Query: 192 R 192 Sbjct: 209 E 209 >UniRef50_B6BS88 Ribonuclease n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BS88_9RICK Length = 190 Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 79/182 (43%), Positives = 119/182 (65%), Gaps = 2/182 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +++AGVDEVGRG L+G V AAVIL+ L DSK +S+ +R L IK+ ++ W Sbjct: 2 KIIAGVDEVGRGSLIGPVYAAAVILNKNIDKKLLKDSKTISKIKRELLSNYIKKNSI-WV 60 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM-AVVKGDSR 128 +G+A EID++NIL A++LAM+RA+ L P +LIDGN+ P + + A++KGD + Sbjct: 61 IGKASVKEIDKINILQASLLAMKRAIKKLKKKPTQILIDGNKVPDIKNYNLKAIIKGDKK 120 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +P ISAASI+AKV RD + +L Y + Q+ GY T HL+ + + G ++HHR++F Sbjct: 121 IPSISAASIIAKVARDKFITSLAKTNKGYHWDQNFGYGTKQHLKAIKKLGISKHHRKTFS 180 Query: 189 PV 190 P+ Sbjct: 181 PI 182 >UniRef50_C6BVQ6 Ribonuclease n=4 Tax=Desulfovibrionales RepID=C6BVQ6_DESAD Length = 218 Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/186 (46%), Positives = 111/186 (59%), Gaps = 11/186 (5%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 + AG+DE GRG L G VV AVIL + GL DSKKL E R L EIK++A+ W+L Sbjct: 15 ITAGIDEAGRGCLAGPVVAGAVILPEEYDLPGLTDSKKLDEAARDRLAVEIKKQAVCWAL 74 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM---------A 121 G + +D++NIL AT AM R+V L + P+ +++DGN+ +P P + A Sbjct: 75 GVSRAQVVDQINILQATFRAMGRSVLHLKVKPQMLMVDGNK--TIPAPHLNGVAGFRQEA 132 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 VVKGD ++P ISAASILAK RD M L + YGF HKGY T HL+ L EHG Sbjct: 133 VVKGDLKIPAISAASILAKTFRDKLMVQLAKRYAAYGFEIHKGYGTKVHLDALKEHGPCA 192 Query: 182 HHRRSF 187 HR +F Sbjct: 193 VHRMTF 198 >UniRef50_C1AAT1 Ribonuclease n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAT1_GEMAT Length = 228 Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 88/184 (47%), Positives = 118/184 (64%), Gaps = 7/184 (3%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 L+ GVDEVGRGPL G VV A+++ PA R IAG++DSK+L + R+ L I++ AL+ Sbjct: 17 SLLVGVDEVGRGPLAGPVVACAIVM-PADRRAIAGVDDSKRLDHRTRVTLAARIRDHALA 75 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAG----LHIAPEYVLIDGNRCPKLPMPAMAVV 123 SLG A E+D LNI HAT+LAMQRA+A L P +V++DG L + AVV Sbjct: 76 LSLGAASAREVDRLNIYHATVLAMQRALARIPQRLGAEPHHVVVDGKPLRTLGVVHTAVV 135 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGD++ I+ ASI+AKVTRD M AL Y + ++ GY T H + +++HG T HH Sbjct: 136 KGDAKCYGIACASIVAKVTRDRLMTALAQRHGHYAWERNAGYGTTQHRDGISQHGLTAHH 195 Query: 184 RRSF 187 RRSF Sbjct: 196 RRSF 199 >UniRef50_Q6NGJ8 Ribonuclease HII n=1 Tax=Corynebacterium diphtheriae RepID=RNH2_CORDI Length = 229 Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 86/185 (46%), Positives = 111/185 (60%), Gaps = 4/185 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIA---GLNDSKKLSEKRRLALYEEIKEKALSW 68 VAGVDE GRG G + AA I+ P RPIA L DSKKLS +R LY IK+ AL+W Sbjct: 36 VAGVDEAGRGSCCGPITIAACIM-PQRPIAQLQALTDSKKLSAAKRAELYPLIKKYALAW 94 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 S+ EID I HA + M+RA+ L +AP YVL D + P L P++ ++ GD+ Sbjct: 95 SIIHISAAEIDREGIQHANIFGMRRAIEKLDVAPGYVLTDAMKVPGLRCPSLPIIGGDAA 154 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 V I+AAS+LAK +RD M L +P+YG HKGY T H++ + HGAT HR S+ Sbjct: 155 VRCIAAASVLAKHSRDLIMDDLGGKYPEYGLEDHKGYGTKSHMDAVRHHGATPEHRYSYS 214 Query: 189 PVKRA 193 VK A Sbjct: 215 NVKAA 219 >UniRef50_D2LBW7 Ribonuclease H n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LBW7_RHOVA Length = 239 Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 95/180 (52%), Positives = 115/180 (63%), Gaps = 2/180 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L+AGVDE GRGP G VV AAVI +P AG+NDSKKL+ R L+ +I A + Sbjct: 52 LIAGVDEAGRGPWAGPVVAAAVIFH-GKPPAGVNDSKKLAPAERENLFSKIFAAAHV-GI 109 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A IDE+NI HAT AM A++ L AP LIDGNRCPKL +P+ A+V GD+ Sbjct: 110 GIAPVELIDEINIYHATHRAMCDAISALAFAPNAALIDGNRCPKLDIPSEALVSGDALSI 169 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASI+AKVTRD M L FP Y + ++KGY TA H L E+G T HHRRSF PV Sbjct: 170 SIAAASIIAKVTRDRMMTELASTFPPYRWERNKGYGTADHASALREYGVTLHHRRSFRPV 229 >UniRef50_B7IF45 Ribonuclease HII n=3 Tax=Thermotogaceae RepID=RNH2_THEAB Length = 220 Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 90/190 (47%), Positives = 116/190 (61%), Gaps = 6/190 (3%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 +VAGVDE GRGPL G VV AAVIL+ I GL+DSKKL+ ++R L+ EI +K+ +++ Sbjct: 2 IVAGVDEAGRGPLFGPVVAAAVILN--EEIDGLDDSKKLTSRKREKLFLEIIKKSY-FAI 58 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLH--IAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 A EID+ NILHAT +AM RA+ L I + +DG L P +VKGDS Sbjct: 59 SIATADEIDKFNILHATEIAMDRALERLRKKINFDIAFVDGKNL-NLKFPFKCIVKGDSL 117 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 V EISAASILAKV RD + + F Y +HKGYPT HL+ + EHG T HR ++ Sbjct: 118 VKEISAASILAKVVRDRIIVSYAKKFSSYMLEKHKGYPTQLHLKLIKEHGLTPLHRLTYK 177 Query: 189 PVKRALGLAS 198 PV L + Sbjct: 178 PVMELLSITQ 187 >UniRef50_D0RRM6 Ribonuclease n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RRM6_9RICK Length = 199 Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 85/190 (44%), Positives = 121/190 (63%), Gaps = 3/190 (1%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 + V GVDEVGRGPL G VV+AAVIL L+DSKKLS+ +R +E +K+K+ + Sbjct: 11 SHFVVGVDEVGRGPLAGPVVSAAVILPLDFDYKCLDDSKKLSKVKREKAFEILKKKS-KF 69 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEY-VLIDG-NRCPKLPMPAMAVVKGD 126 LG AE EID++NIL A++++M+RAV + ++ +L+DG K + +KGD Sbjct: 70 KLGIAEVDEIDKINILQASLISMKRAVDQFDLPKDHKILVDGPWSFDKTNQNIITKIKGD 129 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 ++ P I+AASI+AKV RD M+ L F QY + + GY T HL+ + EHG T HHR+S Sbjct: 130 AKYPSIAAASIIAKVYRDQIMSKLSKNFVQYSWDTNSGYGTQKHLKAIKEHGITVHHRKS 189 Query: 187 FGPVKRALGL 196 F P+ + L L Sbjct: 190 FAPIHKILSL 199 >UniRef50_Q4FT93 Ribonuclease HII n=2 Tax=Psychrobacter RepID=RNH2_PSYA2 Length = 287 Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 92/224 (41%), Positives = 122/224 (54%), Gaps = 40/224 (17%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPA------------RPIAGLNDSKKLSEKRRLALY 58 L GVDE GRGPL+G+V A+ IL A P++ L DSK+LSEK+R LY Sbjct: 62 LQIGVDEAGRGPLLGSVNVASAILPRAWSGLIEAQLLKDTPLSILTDSKQLSEKKRDLLY 121 Query: 59 EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAV---------------AGLHIAPE 103 +++ A+ + + ID++NIL ATML M+ +H Sbjct: 122 PLVQQYAIGYIIADIPAAVIDQINILQATMLGMRLCTEILLEVIAHHLNDMAQDIHQLQT 181 Query: 104 YVLIDGNRCPKLPMPAMA-------------VVKGDSRVPEISAASILAKVTRDAEMAAL 150 VL DGNRCP+L ++A VKGD+R I+AASILAKV+RD M AL Sbjct: 182 AVLFDGNRCPELNYTSLAQLGIKESMIDCQAWVKGDARHTSIAAASILAKVSRDKTMYAL 241 Query: 151 DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRAL 194 D P+YG A+HKGYPT H+E + +G HRRSF PV++AL Sbjct: 242 DTEHPEYGIAKHKGYPTRAHMEAIETYGVLSAHRRSFAPVRKAL 285 >UniRef50_B9EBC6 Ribonuclease HII n=3 Tax=Staphylococcaceae RepID=RNH2_MACCJ Length = 264 Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 80/192 (41%), Positives = 123/192 (64%), Gaps = 3/192 (1%) Query: 1 MIEFVYPHT-QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYE 59 M+E+ + ++V G+DEVGRGPL G V+ AVIL+ GLNDSK+LS+ +R +LY+ Sbjct: 59 MLEYERRYNGKVVCGIDEVGRGPLAGPVIACAVILNDGHHYIGLNDSKQLSKHKRASLYD 118 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPA 119 + + ++++++G A EID+ NI AT LAM RA+ L + P+ +LID + Sbjct: 119 ALTQ-SVTYAIGAASVEEIDKFNIYEATKLAMHRAIDKLPVKPDVLLIDAMNL-NTGLIE 176 Query: 120 MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA 179 +++KGD++ I+AAS++AKV RD M + FP Y F ++ GY T HL+ L ++G Sbjct: 177 ESIIKGDAKSVSIAAASVIAKVYRDHLMEEIHEEFPYYDFNRNAGYGTKRHLDGLMQYGI 236 Query: 180 TEHHRRSFGPVK 191 T HHR+SF P+K Sbjct: 237 TAHHRKSFEPIK 248 >UniRef50_C2ESF1 Ribonuclease n=5 Tax=Lactobacillaceae RepID=C2ESF1_9LACO Length = 260 Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 84/186 (45%), Positives = 112/186 (60%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 Q VAG+DEVGRGPL G VVT AVIL P + G+ DSK+L+ R LY +I +A+ Sbjct: 74 CQYVAGMDEVGRGPLAGPVVTCAVILSPEFDLIGVTDSKQLTRHERENLYLQIVNEAIEV 133 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 S+ + +ID+LNI AT AM +V LH PE +++D P L +P ++KGD + Sbjct: 134 SIAVNDSQKIDQLNIYAATQNAMMTSVRQLHHQPESLIVDAVPLPALDIPQTTLIKGDQK 193 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 ++AASI+AK RD M D ++P Y FA++ GY T HL L + GAT HRRSF Sbjct: 194 SISVAAASIVAKEYRDHLMRDYDRIYPGYDFAENMGYGTKKHLAGLRKLGATPIHRRSFN 253 Query: 189 PVKRAL 194 PV L Sbjct: 254 PVPEYL 259 >UniRef50_C7NAV4 Ribonuclease n=5 Tax=Fusobacteriaceae RepID=C7NAV4_LEPBD Length = 214 Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 88/191 (46%), Positives = 119/191 (62%), Gaps = 5/191 (2%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYE 59 ++EF + ++V GVDE GRGPL G VV AVI+ P + +NDSKKL+EK+R L+E Sbjct: 13 LMEFDEKYNKIVVGVDEAGRGPLAGPVVAGAVIVIQDFPELQEINDSKKLTEKKRERLFE 72 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL--HIAPEYVLIDGNRCPK-LP 116 I EK +G A EIDE+NIL+AT LAM+RA+ + A + VL+DGN + Sbjct: 73 AI-EKNCIVGIGIASEKEIDEMNILNATFLAMRRAINQVAEKSAFDIVLVDGNHLIREYE 131 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 +VKGDS+ I+ ASI+AKVTRD + + FP+Y F +HKGY T H E L E Sbjct: 132 GEQECIVKGDSKSLAIATASIVAKVTRDRMLCEIAKEFPEYQFEKHKGYGTKKHREILLE 191 Query: 177 HGATEHHRRSF 187 GA +HR++F Sbjct: 192 KGACRYHRKTF 202 >UniRef50_C4Z936 Ribonuclease n=4 Tax=Clostridiales RepID=C4Z936_EUBR3 Length = 253 Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 84/182 (46%), Positives = 113/182 (62%), Gaps = 3/182 (1%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 Y H + G+DEVGRGPL G VV AVIL I +NDSKKL+ +R LY+ I EKA Sbjct: 70 YAH---ICGIDEVGRGPLAGPVVACAVILPKDCDILYINDSKKLTAAKRDELYDVIMEKA 126 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 +S +G A IDE+NIL AT AM++A+ L AP+ L D P + + + ++KG Sbjct: 127 VSVGIGMASHERIDEINILQATYEAMRQAIGKLDPAPDLTLNDAVTIPGVDIKQVPIIKG 186 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D++ I AASI+AKVTRD M D ++P YGFA +KGY +A H++ L + G + HR Sbjct: 187 DAKSISIGAASIVAKVTRDRMMVEYDNIYPGYGFASNKGYGSAEHIKALKKIGPSPIHRA 246 Query: 186 SF 187 SF Sbjct: 247 SF 248 >UniRef50_B9DPH3 Ribonuclease HII n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=RNH2_STACT Length = 261 Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 81/181 (44%), Positives = 110/181 (60%), Gaps = 1/181 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 ++ G+DEVGRGPL G VV AVIL+ GL+DSKK+S R L E + EK +++ Sbjct: 73 VICGIDEVGRGPLAGPVVACAVILNADHAYYGLDDSKKVSAANRQKLSEALIEKTTAYAY 132 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A P EID+LNI AT +AM RA+ L++ P ++LID P L + +++KGD++ Sbjct: 133 GIATPEEIDDLNIYQATQVAMMRAIENLNVTPTHLLIDAMELP-LDIAQTSIIKGDAKSV 191 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAK RD M L +P Y F + GY T HLE + G HR+SF P+ Sbjct: 192 SIAAASILAKEHRDTYMRQLAEQYPGYDFEHNVGYGTKAHLEGIKRLGIIPEHRKSFEPI 251 Query: 191 K 191 K Sbjct: 252 K 252 >UniRef50_Q5WFP1 Ribonuclease HII n=2 Tax=Bacillaceae RepID=RNH2_BACSK Length = 259 Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 81/179 (45%), Positives = 111/179 (62%), Gaps = 1/179 (0%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 V GVDEVGRGPL G V A IL + GL DSKKLS+ +R + I E+A+++S+ Sbjct: 71 VCGVDEVGRGPLAGPVTACACILPDDFQLLGLTDSKKLSKAKREEYAKMISEQAVAYSIA 130 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 EIDE+NIL AT AM +A+ GL +++L+D R +P+ +++KGD++ Sbjct: 131 SVSAAEIDEINILQATKKAMTKAINGLSQKTDHLLLDAVRLD-VPIAQTSLIKGDAKSLS 189 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+A+S+LAKV RD M L +P YGF H GY TA HL+ L +G T HR+SF PV Sbjct: 190 IAASSVLAKVWRDRYMEELAQTYPGYGFDTHAGYGTASHLQALRTYGMTPEHRKSFRPV 248 >UniRef50_C8WWC4 Ribonuclease n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWC4_ALIAD Length = 216 Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 88/188 (46%), Positives = 116/188 (61%), Gaps = 4/188 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARP----IAGLNDSKKLSEKRRLALYEEIKEKALS 67 AGVDEVGRG + G VV A+V+L R + + DSK+L R L + I+ KAL+ Sbjct: 20 TAGVDEVGRGCIAGPVVAASVVLPLERETYEELKDVMDSKQLKPDVRERLADRIRAKALA 79 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 +G A P EID LNIL AT LAM+R++ L I + L+DGNR + +P + VV GD+ Sbjct: 80 VGIGMASPEEIDRLNILQATQLAMKRSLDALDIPVDLALVDGNRGFRHRVPVLPVVDGDA 139 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 R ++AAS++AKV RD MA LD FP YGF++H GY T HLE L G + HR SF Sbjct: 140 RSLLVAAASVIAKVFRDRLMAKLDEGFPGYGFSEHVGYGTRAHLEALRRLGPSVVHRLSF 199 Query: 188 GPVKRALG 195 PV+ +G Sbjct: 200 APVRACVG 207 >UniRef50_C9LMH5 Ribonuclease n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMH5_9FIRM Length = 256 Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 91/182 (50%), Positives = 120/182 (65%), Gaps = 1/182 (0%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 + VAG+DEVGRGPL G V AAVIL P IAGLNDSKK++ +RR + ++I E A+ S Sbjct: 68 EYVAGIDEVGRGPLAGPVTVAAVILKPHFFIAGLNDSKKVAPRRREEIAKKIHETAVDIS 127 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + P EID NI ATM AM RAV L I P+ V++D P+P++++V GD++ Sbjct: 128 IVSLSPEEIDMRNIYAATMEAMYRAVRNLKIQPQAVIVDAMPL-HFPVPSLSLVHGDAKS 186 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 ++AASI+AKV RD M D V+P YGF+Q+KGY TA H+E + G T HR+SF P Sbjct: 187 ASVAAASIVAKVHRDHLMDEYDKVYPGYGFSQNKGYGTAEHIEAIRTLGITPIHRKSFEP 246 Query: 190 VK 191 VK Sbjct: 247 VK 248 >UniRef50_A5FIL7 Ribonuclease HII n=4 Tax=Flavobacteriales RepID=RNH2_FLAJ1 Length = 221 Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 87/208 (41%), Positives = 116/208 (55%), Gaps = 21/208 (10%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 M++ Y L G DE GRG L G V AAVIL LNDSK+LSEK R L Sbjct: 1 MLQLNYSGFTLETGTDEAGRGCLAGPVTAAAVILPSVFENNILNDSKQLSEKARALLKPI 60 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC--PKL--- 115 I+E+AL +S+ P EIDE+NIL+A+M MQ + L PEY+++DGNR KL Sbjct: 61 IEEQALCFSVTHLFPDEIDEINILNASMKGMQECILKLKHIPEYIIVDGNRSLNAKLGLK 120 Query: 116 ----------------PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGF 159 +P +++KGD++ I+AASILAK RD M + FP Y + Sbjct: 121 NTFGKQFSKEEIELLKSIPNQSIIKGDAKFLSIAAASILAKTYRDEYMDQIHEEFPMYNW 180 Query: 160 AQHKGYPTAFHLEKLAEHGATEHHRRSF 187 Q+KGYPT H E + ++G T++HR SF Sbjct: 181 KQNKGYPTKEHREAIKKYGTTKYHRMSF 208 >UniRef50_Q3A2F0 Ribonuclease HII n=3 Tax=Deltaproteobacteria RepID=RNH2_PELCD Length = 209 Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/183 (48%), Positives = 117/183 (63%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +AG+DE GRGPL G VV AAV+L P + GLNDSKK+S K R L+ +I+ +AL + +G Sbjct: 27 IAGIDEAGRGPLAGPVVAAAVVLPPVFDLPGLNDSKKISAKLREKLFPQIRRQALDYGIG 86 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 A E+D LN+L AT+LAM+RA+ L +Y+L+DG LP+P + +GDSR Sbjct: 87 LASAQEVDGLNVLQATLLAMRRALDRLAQPADYLLVDGITPVPLPLPQKTLKQGDSRSLS 146 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AAS+LAKV RD M D FP+YGFA HKGY +A H +A G HR +F V+ Sbjct: 147 IAAASVLAKVVRDRLMTTYDARFPEYGFAGHKGYGSAAHRAAIARLGPCPLHRATFRGVR 206 Query: 192 RAL 194 L Sbjct: 207 EYL 209 >UniRef50_O67768 Ribonuclease HII n=3 Tax=Aquificaceae RepID=RNH2_AQUAE Length = 196 Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 87/189 (46%), Positives = 112/189 (59%), Gaps = 12/189 (6%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 LVAGVDE GRGPL G VV AAVIL P DSKKL++K R YEEIK KAL+ Sbjct: 14 LVAGVDEAGRGPLAGPVVAAAVILPPFTEPFIKGDSKKLTKKEREEAYEEIKNKALAVGT 73 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLH-----IAPEYVLIDGNRCPKLPMPAMAVVKG 125 + ID +NIL AT LAM+RA+ L + +YV ++G C M +VKG Sbjct: 74 AVVDSAVIDRVNILRATKLAMKRALKDLKYHYDIVITDYVKLEGENC-------MPLVKG 126 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D + + ASI+AKV RD M ++P + FA +KGYP+ HLEK+ + TE HR+ Sbjct: 127 DEKSLNCACASIIAKVIRDKIMEIYHKIYPDFNFASNKGYPSKTHLEKVEKGEYTEIHRK 186 Query: 186 SFGPVKRAL 194 SF P+K+ L Sbjct: 187 SFSPLKKKL 195 >UniRef50_C4V2D5 Ribonuclease n=2 Tax=Clostridiales RepID=C4V2D5_9FIRM Length = 259 Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 90/181 (49%), Positives = 115/181 (63%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 +VAG+DE GRGPL G V AAVIL + LNDSKKLSEK R LYE I A+S+ + Sbjct: 65 IVAGIDEAGRGPLAGPVAVAAVILPQEYLLLRLNDSKKLSEKVREELYETIVSDAVSYHV 124 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 + ID +NIL AT M AVA L P+ VLID P+L M + ++VKGD++ Sbjct: 125 ELIDAETIDRMNILEATRRGMYDAVAALLPTPQEVLIDAVALPRLRMASQSIVKGDAKSA 184 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAKVTRD M D +P YGFAQHKGY T H+E + ++G HR++F P+ Sbjct: 185 SIAAASILAKVTRDRLMLTYDKEYPVYGFAQHKGYGTREHIEAIRKYGICPLHRKTFEPI 244 Query: 191 K 191 + Sbjct: 245 R 245 >UniRef50_A8TXS8 Ribonuclease n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXS8_9PROT Length = 222 Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 94/192 (48%), Positives = 113/192 (58%), Gaps = 9/192 (4%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 LV GVDEVGRGP G VV A +LD P A + DSK LS RR A Sbjct: 27 LVIGVDEVGRGPWAGPVVAGAAVLDLVAMPTHVAALIADSKALSAPRRADALAAFTPYA- 85 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAV----AGLHIAPEYVLIDGNRCPKLPMPAMAV 122 + +LGRAE EID +NIL A++LAM+RAV A L P +L+DGNR P P P+ A+ Sbjct: 86 AIALGRAEVEEIDAVNILQASLLAMRRAVDALLATLAGPPALILVDGNRLPHWPHPSRAI 145 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD+ IS A+I AK+ RDAEMAAL P YG+ ++ GY T H L G T H Sbjct: 146 VKGDASCLSISVAAIAAKLARDAEMAALAEQHPGYGWERNAGYGTPEHQVALRRLGPTIH 205 Query: 183 HRRSFGPVKRAL 194 HRRSF PV+ A Sbjct: 206 HRRSFAPVRAAF 217 >UniRef50_D1VVL3 Ribonuclease n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVL3_9FIRM Length = 205 Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 78/185 (42%), Positives = 113/185 (61%), Gaps = 7/185 (3%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 ++L+AG+DEVGRG L G V++ A+I+ I G+NDSKKL+ K+R LY +I E +L+ Sbjct: 15 SKLIAGIDEVGRGSLFGDVLSCAIIMKEDSNIEGVNDSKKLTAKKRKELYNKILEDSLAV 74 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLH------IAPEYVLIDGNRCPKLPMPAMAV 122 +GRA+ ID+LNI AT L+M RA+ L + P+ VLID + + ++ Sbjct: 75 GIGRADAKTIDKLNIKMATHLSMVRAIENLRDSQGNLVVPDLVLIDAENI-ETTIFQHSI 133 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD I+ ASI+AKV RD+ ++P YG +HKGY T FH E L +G + Sbjct: 134 IKGDENCYSIACASIIAKVYRDSLCDKWATIYPGYGIEKHKGYGTKFHREALKAYGPSPM 193 Query: 183 HRRSF 187 HR+SF Sbjct: 194 HRKSF 198 >UniRef50_Q0SSB4 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2_CLOPS Length = 272 Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 85/181 (46%), Positives = 108/181 (59%), Gaps = 3/181 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPAR---PIAGLNDSKKLSEKRRLALYEEIKEKAL 66 + VAGVDEVGRGPL G +V+AAVILD + I +NDSKKLSE +R L E IKEKAL Sbjct: 87 KYVAGVDEVGRGPLAGPIVSAAVILDSSNLDDIILYINDSKKLSEHKREELSEIIKEKAL 146 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 S+S+ + EIDE I + +A GL+I P+ VL DG V+KGD Sbjct: 147 SYSISMCDSKEIDEKGIGYCNNHVFIKACEGLNIKPDLVLSDGYLIKNFNGENKHVIKGD 206 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 ++ I+ ASI+AKV RD M +PQY F ++ GY T H++ L E G TE HR S Sbjct: 207 TKSACIACASIIAKVYRDNIMKEYHKKYPQYDFEKNVGYGTKTHVDALKEVGPTEIHRMS 266 Query: 187 F 187 F Sbjct: 267 F 267 >UniRef50_Q2SRV0 Ribonuclease HII n=5 Tax=Mollicutes RepID=RNH2_MYCCT Length = 207 Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 110/182 (60%), Gaps = 1/182 (0%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 ++G DE GRG L G +V A+VIL P + DSKKL+ K R L++EI + L + + Sbjct: 20 LSGSDEAGRGCLAGPLVVASVILKPDYFNPLIKDSKKLNPKTRQVLFDEIIKNCLDYQIM 79 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL-PMPAMAVVKGDSRVP 130 ++DELN L A++L + ++ L I P+ LIDGN+ L + ++++KGD Sbjct: 80 IISSKQVDELNPLQASLLGFKTTISNLKITPDLALIDGNQNINLENIKTLSIIKGDDNSF 139 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+ +SILAKVTRD + D ++P YGF HKGY T HL + ++G + HR+S+ P+ Sbjct: 140 SIACSSILAKVTRDKILDQYDQIYPNYGFKSHKGYCTKKHLLAIQKYGVLDIHRKSYKPI 199 Query: 191 KR 192 K+ Sbjct: 200 KK 201 >UniRef50_C6X037 Ribonuclease n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X037_FLAB3 Length = 218 Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 83/176 (47%), Positives = 106/176 (60%), Gaps = 1/176 (0%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGR 72 AG DEVGRG L G VV AAVILD ++DSKKL+ K R+ L IK+ +++ Sbjct: 26 AGCDEVGRGCLCGPVVAAAVILDEKFVQNLVDDSKKLNFKTRIYLDAYIKDNVKEYAVAE 85 Query: 73 AEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMAVVKGDSRVPE 131 P IDE NIL+A++ AM RA+ L PE +L+DGNR P +P ++KGD+ + Sbjct: 86 LPPSHIDEHNILNASIHAMHRALDQLQTRPELILVDGNRFHPYNFIPHQCIIKGDASILS 145 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+ ASILAK RD M L FP YG+ + GY T H E L +G TEHHRRSF Sbjct: 146 IACASILAKNYRDQLMIKLHDEFPHYGWKTNMGYATKEHREALNRYGPTEHHRRSF 201 >UniRef50_D1B6E3 Ribonuclease n=2 Tax=Synergistaceae RepID=D1B6E3_THEAS Length = 188 Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/182 (50%), Positives = 115/182 (63%), Gaps = 7/182 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL--DPARPIA--GLNDSKKLSEKRRLALYEEIKEKALS 67 VAGVDE GRGPL G VV AA +L D AR + GL DSK LS +RR AL+E I+ + Sbjct: 3 VAGVDEAGRGPLAGPVVAAAAVLTRDQARELMALGLKDSKALSPRRREALFEAIRSLNVQ 62 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP--KLPMPAMAVVKG 125 W A ID ++L A++ AM AV L + P+ VL+DG+ P L +P VVKG Sbjct: 63 WRAQAASWGRIDRTHVLKASLWAMGMAVMALPVRPQLVLVDGS-VPIEGLRIPQRCVVKG 121 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 DS+VP I AAS++AKV RD M ALD ++PQY FA HKGYPT H L++ G + HRR Sbjct: 122 DSKVPSIMAASVIAKVLRDRVMLALDRLYPQYRFASHKGYPTEEHRRILSQLGPSPVHRR 181 Query: 186 SF 187 SF Sbjct: 182 SF 183 >UniRef50_A8MHC7 Ribonuclease HII n=3 Tax=Firmicutes RepID=RNH2_ALKOO Length = 203 Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/182 (46%), Positives = 111/182 (60%), Gaps = 7/182 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +A DEVGRG L G+V+ AAVI+ I G+ DSKKLS K+R LYE IKEK+L+ +G Sbjct: 18 IACCDEVGRGCLFGSVLAAAVIMPKDVIIDGVKDSKKLSHKKREQLYEIIKEKSLAIGVG 77 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLH------IAPEYVLIDGNRCPKLPMPAMAVVKG 125 ID++NI +AT LAM++A+ L +AP+Y+LID +P P AV+KG Sbjct: 78 TVSSEIIDKINIKNATRLAMKKAILSLKDKDGNIVAPDYILIDAEEI-DVPTPQSAVIKG 136 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D I+AASI+AKV RD + P YG Q+KGY T H E L EHG + HR+ Sbjct: 137 DDLCHGIAAASIVAKVLRDRLCQRWEEEHPNYGIGQNKGYGTKAHREALKEHGPSPMHRK 196 Query: 186 SF 187 SF Sbjct: 197 SF 198 >UniRef50_Q6MLA0 Ribonuclease HII n=1 Tax=Bdellovibrio bacteriovorus RepID=RNH2_BDEBA Length = 221 Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/182 (48%), Positives = 112/182 (61%), Gaps = 3/182 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + GVDEVGRG L G V AAVI + DSK LSEKRR L + I ++ + +G Sbjct: 38 IIGVDEVGRGCLAGPVYAAAVIFKSDALNDLVTDSKLLSEKRREELADLILKEHIV-GIG 96 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLP-MPAMAVVKGDSRV 129 A EIDE+NIL+A++LAM+RAV L + +VL+DGN+ P L +VKGD RV Sbjct: 97 SASVEEIDEINILNASLLAMKRAVEKLGVKSGHVLVDGNKKIPNLKGFEQSTIVKGDLRV 156 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 ISAASI+AKVTRD M L + +P YGF HKGY T H + + +HG HRRSF Sbjct: 157 APISAASIVAKVTRDRLMKDLGVKYPHYGFEIHKGYSTPVHKQSIVDHGPCIAHRRSFAG 216 Query: 190 VK 191 VK Sbjct: 217 VK 218 >UniRef50_B7FYE5 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FYE5_PHATR Length = 189 Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 93/193 (48%), Positives = 122/193 (63%), Gaps = 15/193 (7%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVI--LDPARPIAGLNDSKKLS-EKRRLALYEEI-KEKA 65 Q V GVDE GRGPL G VV AA + +D I G+ DSK L+ E R LYE+I Sbjct: 1 QYVIGVDEAGRGPLAGPVVAAAAVVPID----IVGIADSKTLTRESVREELYEKIVSSDN 56 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQ---RAVAGLHIAPE---YVLIDGNRCPK-LPMP 118 + W++ + IDE+NIL AT+ M+ AVAG+ P+ Y L+DGNR PK + M Sbjct: 57 VRWAVAVIDSARIDEVNILQATLQGMRLAASAVAGISEVPDNAFYALLDGNRLPKKMAMR 116 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 +VKGDSR I+AASILAKVTRD M D ++P+Y AQHKGYPTA H++ + ++G Sbjct: 117 VETMVKGDSREYSIAAASILAKVTRDRLMHGYDKLYPEYNLAQHKGYPTAAHMDAVRKYG 176 Query: 179 ATEHHRRSFGPVK 191 A+ HRR+F P+K Sbjct: 177 ASPIHRRTFAPLK 189 >UniRef50_Q5NNT2 Ribonuclease HII n=5 Tax=Alphaproteobacteria RepID=RNH2_ZYMMO Length = 215 Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 81/186 (43%), Positives = 113/186 (60%), Gaps = 5/186 (2%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 +V GVDEVGRGPL G V+ AV L G+NDSKKL+ +RR L + + +A ++ Sbjct: 25 VVFGVDEVGRGPLAGPVMAGAVYLHREHIPEGINDSKKLTARRRHLLSDMLHNQA-DYAT 83 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGL----HIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 G A+ HEID +NI A++LAM+RAV L P+ +L+DG P P P++ ++KGD Sbjct: 84 GMADVHEIDRINIRQASLLAMKRAVEALIQKIGREPDCILVDGRDIPDWPWPSLPIIKGD 143 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S I+AASI+AKV RD M +P YG+ + GYPT H E + T+ HRRS Sbjct: 144 SLSLSIAAASIVAKVERDEIMVKASQEYPGYGWEHNMGYPTKEHREAIQRLKPTKFHRRS 203 Query: 187 FGPVKR 192 F P+++ Sbjct: 204 FSPIRQ 209 >UniRef50_C6XGP6 Ribonuclease n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGP6_LIBAP Length = 209 Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 87/181 (48%), Positives = 111/181 (61%), Gaps = 2/181 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG+DEVGRG L G VV AA+ILDP G+NDSKK+S K+R LYE+I A+ Sbjct: 26 VAGIDEVGRGALAGPVVVAAIILDPNNIPFGINDSKKISHKKREELYEKITSSAIISISS 85 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSRVP 130 + + ID+ NI AT+ A+ AV L + P LIDG P+ LP A AV+KGDS Sbjct: 86 ASHQY-IDKHNIHKATLDAIYHAVENLQVIPRSALIDGRSIPEDLPCQAFAVIKGDSISL 144 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASI+AKVTRD M +P YGF H GYPTA H + + E G + HR +F P+ Sbjct: 145 SIAAASIIAKVTRDRLMRIAHKKYPDYGFDSHVGYPTAKHQQVIKEKGPSCIHRLTFRPL 204 Query: 191 K 191 + Sbjct: 205 R 205 >UniRef50_Q31PW0 Ribonuclease HII n=2 Tax=Synechococcus elongatus RepID=RNH2_SYNE7 Length = 215 Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 91/184 (49%), Positives = 111/184 (60%), Gaps = 7/184 (3%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIA-----GLNDSKKLSEKRRLALYEEIKEK 64 Q VAGVDEVGRG L G VVTAAVIL P IA G+ DSK+LS+++R LY I E Sbjct: 19 QTVAGVDEVGRGCLFGPVVTAAVIL-PETAIAPLQQAGVTDSKRLSQRQRQQLYPLICEV 77 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVV 123 AL+ G A EI+ NIL AT LAM+RA+A L LIDGN+ P+L P V+ Sbjct: 78 ALATGWGLASVAEIERWNILQATFLAMRRAIAKLDRPISRCLIDGNQQVPQLTYPQTTVI 137 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 +GD I+AASILAKV RD + LD +P Y +HKGY TA H + + + G T H Sbjct: 138 QGDRHCITIAAASILAKVWRDRLIERLDERYPGYALGRHKGYGTAQHRQAILQLGPTPLH 197 Query: 184 RRSF 187 R F Sbjct: 198 RIRF 201 >UniRef50_A0QV44 Ribonuclease HII n=27 Tax=Actinomycetales RepID=RNH2_MYCS2 Length = 272 Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/184 (46%), Positives = 113/184 (61%), Gaps = 2/184 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPAR--PIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDEVGRG G +V AA +L P R +A L+DSKKL EK R L+ I+ AL++ Sbjct: 32 VAGVDEVGRGACAGPLVVAACVLGPNRLESLAALDDSKKLGEKERERLFPLIRRYALAYH 91 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + HE+D + A + M+RAVAGL + P YVL DG R P L +P++ V+ GD+ Sbjct: 92 VVFIPSHEVDRRGVHVANIEGMRRAVAGLSVRPGYVLSDGFRVPGLSVPSLPVIGGDAAA 151 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AAS+LAKV+RD M ++ P YGFA+HKGY T H L HG HR S+ Sbjct: 152 ACIAAASVLAKVSRDRLMVEMEEQHPGYGFAEHKGYITPAHTAALTRHGPCVEHRYSYVN 211 Query: 190 VKRA 193 V+RA Sbjct: 212 VRRA 215 >UniRef50_A9H3E2 Ribonuclease HII n=10 Tax=Acetobacteraceae RepID=RNH2_GLUDA Length = 224 Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 94/194 (48%), Positives = 115/194 (59%), Gaps = 5/194 (2%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILD---PARPIAGLNDSKKLSEKRRLALYEEI-KE 63 H VAGVDEVGRGPL G VV AAV+ D P R + L+DSKKL+E RL Y + Sbjct: 10 HGGRVAGVDEVGRGPLAGPVVAAAVMFDSGVPRRLVTQLDDSKKLTEAARLRAYAALHAA 69 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 + + ++ A EI LNIL A LAM+RAVA L P+ VL+DGN P PA VV Sbjct: 70 RGVHIAVAAASVSEIARLNILRAAFLAMRRAVARLPHQPDMVLVDGNAAPDFGCPAQCVV 129 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD I+AASI+AKV RD MA L +P YG+ ++ GY TA H L G T HH Sbjct: 130 GGDGESLSIAAASIVAKVVRDRLMARLSCRWPGYGWERNAGYGTAEHRAALCRAGTTPHH 189 Query: 184 RRSFGPVKR-ALGL 196 R +FG V++ LGL Sbjct: 190 REAFGLVRQLTLGL 203 >UniRef50_Q3Z8D7 Ribonuclease HII n=2 Tax=Dehalococcoides RepID=RNH2_DEHE1 Length = 211 Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/183 (42%), Positives = 114/183 (62%), Gaps = 3/183 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDP---ARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 +AG+DE GRG L G VV AVI+ P +A + DSK L+ ++R LY I A+S+ Sbjct: 23 IAGLDEAGRGCLAGPVVAGAVIMPPRLKGDWVAMVRDSKVLTPEKREYLYCHIVSMAISF 82 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 +G + +ID L I AT LAM++AV L P+++L+D + P +P+P +V GD+ Sbjct: 83 GVGVVDNTQIDCLGIAPATRLAMKQAVEHLDCRPDFLLVDYLKLPDIPLPQKGIVDGDAL 142 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+ ASI+AKV+RD M L+ +P Y A+HKGY TA H+E +++ G + HRR+F Sbjct: 143 CFSIACASIIAKVSRDRLMCELEATYPGYHLAKHKGYGTALHMECISQKGISPIHRRTFA 202 Query: 189 PVK 191 P+K Sbjct: 203 PLK 205 >UniRef50_Q73MG1 Ribonuclease HII n=1 Tax=Treponema denticola RepID=RNH2_TREDE Length = 198 Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/198 (41%), Positives = 116/198 (58%), Gaps = 26/198 (13%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS--- 67 ++ G+DE GRGPL G V AAVIL + + L DSKKL+EK+R EE+++ + Sbjct: 1 MLCGIDEAGRGPLAGPVTAAAVILPSSFDFSILKDSKKLTEKKR----EEVRKTIYADPN 56 Query: 68 --WSLGRAEPHEIDELNILHATMLAMQRAVAGLH--------------IAPEYVLIDGNR 111 W++G A +EIDE+NIL AT LAM+RA GL+ I P+ +++DGN Sbjct: 57 VIWAIGWASNYEIDEINILQATFLAMERAYEGLYLKLQEFCKLNNDKFIEPD-IIVDGNF 115 Query: 112 CPKLPMPA--MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAF 169 P + + A+VK D V E+ AASILAK RD M ++P+YG+ +HKGY T Sbjct: 116 IPNIKNCSSIKALVKADDSVYEVMAASILAKTARDRMMIRYSWIYPEYGYEKHKGYGTKK 175 Query: 170 HLEKLAEHGATEHHRRSF 187 H+E + +G + RRSF Sbjct: 176 HIEAIRFNGYSPIQRRSF 193 >UniRef50_Q11KH2 Ribonuclease HII n=47 Tax=Alphaproteobacteria RepID=RNH2_MESSB Length = 253 Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 90/182 (49%), Positives = 110/182 (60%), Gaps = 2/182 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG+DE GRGPL G VV AAV+LDP R GL+DSK+L+ + R L +EI E A + S+ Sbjct: 34 VAGLDEAGRGPLAGPVVAAAVVLDPDRIPEGLDDSKRLTAEARERLVQEIFEVAAAVSVA 93 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSRVP 130 IDE NIL A++ AM+RA+ GL + P Y L DG P LP P AVVKGD R Sbjct: 94 SLCAASIDESNILKASLEAMRRALDGLCVRPAYALADGRDIPPGLPCPCRAVVKGDQRSQ 153 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG-ATEHHRRSFGP 189 I+AAS++AKV RD M + P YGF H GY T H E + +G T HR SF P Sbjct: 154 SIAAASMVAKVVRDRMMVRTGTLMPHYGFHSHVGYATERHREAITAYGPVTRLHRMSFSP 213 Query: 190 VK 191 K Sbjct: 214 FK 215 >UniRef50_D2RIH6 Ribonuclease H n=2 Tax=Acidaminococcus RepID=D2RIH6_ACIFE Length = 270 Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 90/183 (49%), Positives = 115/183 (62%), Gaps = 6/183 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG DE GRGPL G +VTAAVIL + + GLNDSKK++ RR LY EI E+A+S ++ Sbjct: 73 VAGCDEAGRGPLAGPLVTAAVILPHSIWLPGLNDSKKVTAARREILYGEILEQAVSVTVS 132 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV---VKGDSR 128 P EID LNI A AM + L + P+ + D L +P M V V GDSR Sbjct: 133 ILGPREIDRLNIYQAAKTAMTLCLTHLKVRPQAAVTDAM---PLEIPGMEVEDLVHGDSR 189 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 ++AASI+AKVTRD M +D +PQYGFA+HKGY TA H++ + + G T HRRSF Sbjct: 190 SAAVAAASIIAKVTRDHLMEDMDRQYPQYGFAKHKGYGTARHIQAILDCGPTPWHRRSFE 249 Query: 189 PVK 191 P+K Sbjct: 250 PLK 252 >UniRef50_A8RBU7 Ribonuclease n=4 Tax=Erysipelotrichaceae RepID=A8RBU7_9FIRM Length = 208 Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 82/189 (43%), Positives = 113/189 (59%), Gaps = 12/189 (6%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 Q + G+DE GRGP+ G +V AAV + DSKKLSEK+R L+ +I ++A + Sbjct: 17 QAIVGIDEAGRGPIAGPLVVAAVSFPDDYDDDEIYDSKKLSEKKRELLFRKIIKEAREYH 76 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP-----AMAVVK 124 + + ID NI AT AMQR + E+ +IDG +P+P +++VK Sbjct: 77 ILIVDTKTIDTENIYRATQNAMQR------LCDEFQMIDGVLTDAMPLPFCKQDCISLVK 130 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH-H 183 GD + I+AASILAKVTRD M A D+ +PQYGFA+HKGYPT HLE L +G + + Sbjct: 131 GDQKSVSIAAASILAKVTRDHIMMAYDLQYPQYGFAKHKGYPTKVHLEALHRYGVIDGLY 190 Query: 184 RRSFGPVKR 192 R S+GPV + Sbjct: 191 RHSYGPVAK 199 >UniRef50_Q3AC76 Ribonuclease HII n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RNH2_CARHZ Length = 231 Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 80/186 (43%), Positives = 105/186 (56%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +LVAG DE GRGP+ G VV A V++ P I ++DSKKLS K+R L+EEI WS Sbjct: 38 ELVAGGDEAGRGPVAGPVVAAIVVIKPGIYIPEVDDSKKLSSKKREKLFEEIINLVTDWS 97 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + P ID LNI AT A + A+ L I PE +++D + +++VK D Sbjct: 98 VAVVGPDLIDRLNIYQATKFAFKAALDSLSIKPEALILDALKLTGFSGKQVSMVKADEIS 157 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 ++ ASILAKV RD M D FP YGF ++KGY T H E L G + HR+SF P Sbjct: 158 FAVACASILAKVIRDKIMEQYDKDFPGYGFKKNKGYLTREHREALELLGPSPIHRKSFEP 217 Query: 190 VKRALG 195 +K G Sbjct: 218 IKSFYG 223 >UniRef50_A5IIL8 Ribonuclease HII n=7 Tax=Thermotogaceae RepID=RNH2_THEP1 Length = 238 Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 86/180 (47%), Positives = 117/180 (65%), Gaps = 4/180 (2%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 +VAGVDE GRG L G VV AAV+L+ + I G+NDSK+LS +R L++EI KA + + Sbjct: 13 IVAGVDEAGRGCLAGPVVAAAVVLE--KEIEGINDSKQLSPAKRERLFDEIMGKA-AVGI 69 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A P EID NI +AT LAM RA+ L + P +VL+DG + +L +P +VKGD + Sbjct: 70 GIASPEEIDLHNIFNATKLAMNRALENLSVGPSFVLVDG-KGIELRVPGTCLVKGDQKSK 128 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I AASI+AKV RD M+ ++PQ+ F +HKGY T HL ++ ++G HR SF PV Sbjct: 129 LIGAASIVAKVFRDRLMSEFHKMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRMSFEPV 188 >UniRef50_C4XFT1 Ribonuclease n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XFT1_MYCFE Length = 217 Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 73/190 (38%), Positives = 107/190 (56%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 YP T+L+ G+DE GRG G +V VI+ + DSK+LS+K+R E I E A Sbjct: 28 YPDTKLIVGLDEAGRGCCAGPLVVGCVIMPQNFNHPLIKDSKQLSQKQREEALEIILENA 87 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 + E+D+LN A+ + MQR + L+ PE V+ D + + +P + +VKG Sbjct: 88 IETVTTIINAQEVDQLNPKQASRIGMQRCINKLNTKPELVITDFEKINDINIPQINLVKG 147 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D ++AASILAKVTRD M +D FP Y F ++KGY T H ++++G E HR+ Sbjct: 148 DQLSINVAAASILAKVTRDLIMVGIDKKFPMYNFKKNKGYCTKEHEAAMSQYGICEFHRK 207 Query: 186 SFGPVKRALG 195 S+ VK+ L Sbjct: 208 SYKNVKKYLN 217 >UniRef50_B3DVH3 Ribonuclease n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVH3_METI4 Length = 226 Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 77/181 (42%), Positives = 119/181 (65%), Gaps = 3/181 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPI-AGLNDSKKLSEKRRLALYEEI-KEKALS 67 +++AG+DEVGRG + G VV AAVIL P L DSK + EK+R + + + KE +S Sbjct: 18 RVIAGIDEVGRGAIAGPVVAAAVILPQDLPFHKYLKDSKAVEEKKRKQVVQWLLKEGRIS 77 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGD 126 + LG + EI+ +NI + +LAM+RA++ L P+ +L+DG P L +P++ +V GD Sbjct: 78 FGLGFSFVEEIERINIHGSCLLAMRRAISCLEERPDILLVDGIFSPPHLSIPSLTIVGGD 137 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 ++V I+AAS++AKV+RD M L ++P+YG+ ++KGY TA H E L G + +HR+S Sbjct: 138 AKVASIAAASLVAKVSRDGWMVKLSSLYPEYGWEKNKGYGTANHFESLRTKGLSPYHRKS 197 Query: 187 F 187 F Sbjct: 198 F 198 >UniRef50_Q8RDX3 Ribonuclease HII n=12 Tax=Fusobacterium RepID=RNH2_FUSNN Length = 215 Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 86/183 (46%), Positives = 115/183 (62%), Gaps = 8/183 (4%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL-DPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 V GVDE GRGPL G VV AAVIL + + +NDSKKL+EK+R LY+ I K ++ Sbjct: 21 VIGVDEAGRGPLAGPVVAAAVILKEYTEELDEINDSKKLTEKKREKLYDIIM-KNFDVAV 79 Query: 71 GRAEPHEIDELNILHATMLAMQRAVA---GLHIAPEY-VLIDGN-RCPKLPMPAMAVVKG 125 G + EID+LNIL+A LAM+RA+ L EY VL+DGN + + + +VKG Sbjct: 80 GISTVEEIDKLNILNADFLAMRRALKDLKSLKNEKEYTVLVDGNLKIKEYIGKQLPIVKG 139 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH-HR 184 D++ I+AASI+AKVTRD M L ++P Y F +HKGY T H+E + + GA E HR Sbjct: 140 DAKSLSIAAASIIAKVTRDRLMKDLANIYPDYSFEKHKGYGTKTHIEAIKDKGAIEGVHR 199 Query: 185 RSF 187 + F Sbjct: 200 KVF 202 >UniRef50_B0TH73 Ribonuclease n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH73_HELMI Length = 205 Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/186 (45%), Positives = 108/186 (58%), Gaps = 1/186 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 ++AGVDE GRG L G VV AAVIL + GLNDSKKLS RR AL EIK AL+W + Sbjct: 19 VIAGVDEAGRGSLAGPVVAAAVILPLGCMMEGLNDSKKLSPARREALAVEIKRLALAWGI 78 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN-RCPKLPMPAMAVVKGDSRV 129 G ID + I+ +T AM A+ L P+Y+++DGN + P A++ GD+ Sbjct: 79 GIVSSQVIDRIGIVPSTFRAMSLAIDRLGDRPDYLIVDGNQKVPGYEGTQEALIDGDALA 138 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 ++AASILAKV RD M + FP YGF QHKGY T H + E G HR +F Sbjct: 139 APVAAASILAKVVRDGLMKRYSLFFPGYGFEQHKGYGTQAHRSAILEQGTCLLHRETFVH 198 Query: 190 VKRALG 195 ++R G Sbjct: 199 LRRPEG 204 >UniRef50_C9RN38 Ribonuclease n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RN38_FIBSS Length = 247 Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/221 (38%), Positives = 118/221 (53%), Gaps = 34/221 (15%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 +F ++ +V G+DEVGRGPL G VV A +L + LNDSKKLS +R A+++ +K Sbjct: 24 KFAAENSAIVVGIDEVGRGPLAGPVVACAAVLKSPDALLTLNDSKKLSRPKREAMFDAVK 83 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHI------APE------------- 103 + +++ A EIDE+NIL A LAM+RA+ L APE Sbjct: 84 DACACYAIASASVEEIDEINILEADFLAMRRALQALGFPGLNESAPEIPIEVKGSLNDVM 143 Query: 104 -------------YVLIDGN-RCPKLPMP-AMAVVKGDSRVPEISAASILAKVTRDAEMA 148 + +DGN + +P M +VKGD R+ ISAASILAKV RD M Sbjct: 144 PDSVPASALSSNVLIAVDGNLKIRGVPAENQMPIVKGDGRIASISAASILAKVFRDRYMD 203 Query: 149 ALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 L+ ++P YGF +H GY T HL+ + G + HR+SF P Sbjct: 204 KLEELYPGYGFDKHAGYGTKAHLDAIRRQGFSPAHRKSFHP 244 >UniRef50_C1FF37 Ribonuclease n=3 Tax=Mamiellales RepID=C1FF37_9CHLO Length = 262 Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/184 (45%), Positives = 117/184 (63%), Gaps = 2/184 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI-KEKALSW 68 ++V GVDE GRGPL G VV AA + I +NDSK+++E+ R +YEE+ + Sbjct: 68 KIVCGVDEAGRGPLAGPVVAAACVFPEDLVIDAINDSKQMTEEEREEVYEELMANDQVIK 127 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDS 127 S+ + IDE+NIL ATM AM ++V GL ++VLIDGNR P L A A+VKGD+ Sbjct: 128 SVCVIDHERIDEINILEATMQAMAKSVEGLSTRADWVLIDGNRVPPPLIDRAEAIVKGDA 187 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + I+AAS+LAKVTRD M + +P YGF QHKGY H++ + +HG +HR++F Sbjct: 188 KSVCIAAASVLAKVTRDRMMVKIHDEYPVYGFDQHKGYGVKAHMDAIHKHGPCPYHRKTF 247 Query: 188 GPVK 191 P+K Sbjct: 248 APMK 251 >UniRef50_C2C194 Ribonuclease n=1 Tax=Listeria grayi DSM 20601 RepID=C2C194_LISGR Length = 259 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 83/182 (45%), Positives = 114/182 (62%), Gaps = 1/182 (0%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +AGVDEVGRGPL G VV AAVIL + G+NDSK+LSE++R Y+ I+E+A+S + Sbjct: 74 IAGVDEVGRGPLAGPVVAAAVILPNDFSVTGINDSKQLSEEKRQYYYDIIREQAVSIGIS 133 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 ID++NI AT LAM A+ L AP++ LID + +A++KGD++ Sbjct: 134 IQSHEVIDQVNIYEATKLAMAEALDNLDPAPDFTLIDAMKLG-YSKQELAIIKGDTKSIS 192 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASI+AKVTRD+ M + ++P Y FA + GY T HL L + G HR +F PVK Sbjct: 193 IAAASIIAKVTRDSLMKEAEQLYPGYDFAHNMGYGTKLHLAGLDQQGVCPIHRLTFAPVK 252 Query: 192 RA 193 A Sbjct: 253 AA 254 >UniRef50_Q313K1 Ribonuclease HII n=7 Tax=Desulfovibrio RepID=RNH2_DESDG Length = 263 Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/220 (43%), Positives = 115/220 (52%), Gaps = 31/220 (14%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP---------IAGLNDSKKLSEKR 53 + +YP G+DE GRG L G VV AAVIL PA ++GL DSKKLSEKR Sbjct: 34 DSLYP--AFFTGIDEAGRGCLAGPVVAAAVILPPAGAPAAPHIAAALSGLTDSKKLSEKR 91 Query: 54 RLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH-----------IAP 102 RL L IK A+ W +G P ID +NIL AT AM AV L + P Sbjct: 92 RLTLEPAIKSCAVRWGVGVVWPQVIDRINILQATYRAMSLAVRHLRGGGAAASMPAGLPP 151 Query: 103 EYVLIDGNRC---------PKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIV 153 ++ +DG++ L +P A+V GD V ISAAS+LAK RD M ALD Sbjct: 152 VFLAVDGDKTIPGQVLQAVTGLSVPQEAIVGGDGCVMAISAASVLAKTFRDRLMTALDKR 211 Query: 154 FPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRA 193 + YGFA HKGY TA H+E + G HR SF VK A Sbjct: 212 YSGYGFATHKGYGTAAHIEAIRRLGPCRMHRLSFAKVKPA 251 >UniRef50_A3ER37 Ribonuclease n=2 Tax=Leptospirillum sp. Group II RepID=A3ER37_9BACT Length = 228 Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 86/191 (45%), Positives = 111/191 (58%), Gaps = 8/191 (4%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA-----GLNDSKKLSEKRRLAL 57 EF VAGVDEVGRG L G VV AAVIL P+ G+ DSK LS +R+AL Sbjct: 11 EFYKKGFLRVAGVDEVGRGALAGPVVAAAVIL--PMPLEFFENIGIRDSKLLSPSKRVAL 68 Query: 58 YEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLP 116 + ++ SWS+G + EI+ LNI AT+LAM+RAV GL P+ +L+DG P L Sbjct: 69 SDRLRSLLFSWSVGESTVSEINALNIRRATLLAMKRAVEGLPEFPDILLVDGREIVPDLV 128 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 + GD R+ I+AASI+AKV RD M+ LD + YG A++KGY TA H + L Sbjct: 129 CKQESFTGGDRRILSIAAASIIAKVYRDNMMSELDNAYAGYGLAENKGYGTAQHRDGLLL 188 Query: 177 HGATEHHRRSF 187 G + HR F Sbjct: 189 RGVSSIHRAVF 199 >UniRef50_B1VG82 Ribonuclease n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VG82_CORU7 Length = 241 Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 84/184 (45%), Positives = 108/184 (58%), Gaps = 2/184 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL-DPARP-IAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDE GRG G + A+ IL D P +AGLNDSKKL+ KRR L+ I E A+++ Sbjct: 41 VAGVDEAGRGACCGPITIASCILPDHGVPELAGLNDSKKLTPKRRERLFGAITEHAVAYE 100 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + EID+ I +A + M R VAGL + P+ VL D P+L +VKGD+ Sbjct: 101 IVHIPAAEIDQRGIQYANINGMYRVVAGLGVEPDVVLTDAVHLPELACEHAPLVKGDALS 160 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 P ISAASILAKV+RD M + +P YG A HKGY TA H+ + HGA HR ++ Sbjct: 161 PAISAASILAKVSRDRLMVEMAEKYPGYGLAGHKGYGTAKHMAAVRLHGACPEHRYTYSN 220 Query: 190 VKRA 193 V A Sbjct: 221 VATA 224 >UniRef50_C5RBD5 Ribonuclease n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD5_WEIPA Length = 254 Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 83/190 (43%), Positives = 116/190 (61%), Gaps = 1/190 (0%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 + ++VAG+DEVGRGPL G VV AAV++D + + ++DSK+LSEK R ++ EI+EK Sbjct: 66 WQQGKVVAGIDEVGRGPLAGPVVAAAVVIDDSFDMTIVHDSKQLSEKTRQSIDTEIREKV 125 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 + ++ G + +ID LNI A+ +AM+++V L + + +LID L +P ++KG Sbjct: 126 VDFAFGVVDAKDIDRLNIYEASRVAMRQSVEALSVPIDGLLIDAMTVD-LEIPQEKLIKG 184 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D R I AASILAK RD M FP YGF + GY TA HL L G T HR+ Sbjct: 185 DDRSISIGAASILAKNYRDNLMKDFAQQFPGYGFEHNAGYGTAEHLAGLNTLGITPIHRK 244 Query: 186 SFGPVKRALG 195 SF PVK+ L Sbjct: 245 SFAPVKKFLN 254 >UniRef50_B0JV09 Ribonuclease HII n=3 Tax=Chroococcales RepID=RNH2_MICAN Length = 208 Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 85/186 (45%), Positives = 113/186 (60%), Gaps = 6/186 (3%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDP---ARPIA-GLNDSKKLSEKRRLALYEEIKEKAL 66 L+AGVDEVGRG L G VV A V+ P AR G+ DSK+LS ++R L +I+ + Sbjct: 6 LIAGVDEVGRGALFGPVVAAVVVTVPSGFARLWELGVKDSKQLSPQKRQKLSRQIQRDFV 65 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKG 125 +G A EID LNI HA++LAM RA+ L ++P +DG K L +P AV++G Sbjct: 66 C-RIGYATVKEIDRLNIFHASLLAMSRAIGKLPLSPSLCWVDGKHIIKDLSIPQKAVIQG 124 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D + P I+AASI+AKV RD + +P YG A+HKGY TA HLE + +G T HR Sbjct: 125 DQQSPVIAAASIVAKVWRDDLITRWHRRYPDYGLARHKGYGTAQHLEAIGNYGLTSQHRL 184 Query: 186 SFGPVK 191 SF P + Sbjct: 185 SFSPCQ 190 >UniRef50_A1HN67 Ribonuclease n=3 Tax=Veillonellaceae RepID=A1HN67_9FIRM Length = 265 Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 86/187 (45%), Positives = 113/187 (60%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L+AGVDE GRGPL G VV AAVIL + + LNDSKKLS +R LYE+I A++ + Sbjct: 79 LIAGVDEAGRGPLAGPVVVAAVILPKRQHLPMLNDSKKLSPHQRSLLYEKIIGTAVAVNH 138 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 +ID +NI AT+ M R + L P+ LID K+ +P M+++ GD+ Sbjct: 139 VVIPVCQIDSMNIYQATLQGMYRVLENLSPKPQVALIDAMPLRKIVLPHMSIINGDALSA 198 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASI+AKV RD M +D+++P YGFA+HKGY T HL L G HRRSF P+ Sbjct: 199 SIAAASIVAKVVRDRYMDEMDVLYPGYGFAKHKGYATPEHLAALRRLGPCPIHRRSFEPI 258 Query: 191 KRALGLA 197 K GL Sbjct: 259 KSWGGLG 265 >UniRef50_A7IES2 Ribonuclease HII n=10 Tax=Proteobacteria RepID=RNH2_XANP2 Length = 249 Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 95/186 (51%), Positives = 116/186 (62%), Gaps = 2/186 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG DEVGRGPL G VV AAV+LDPAR GL+DSKKL+ +R +LY EI A ++ Sbjct: 54 VAGADEVGRGPLAGPVVAAAVVLDPARVPQGLDDSKKLTRAKRESLYLEICATA-EVAIA 112 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 A P ID NI AT+ A+ AV GL P ++L+DGN P++ A+V GD V Sbjct: 113 LAPPERIDRDNIRQATLWALANAVRGLPCRPAFLLVDGNDPPRVDCEVEAIVGGDGLVAS 172 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASI+AKV RD MA + FP YGF +H GY T H L HG HHRRSF PV+ Sbjct: 173 IAAASIVAKVVRDRLMAGVGAAFPAYGFERHMGYGTREHGAALKAHGPCLHHRRSFAPVR 232 Query: 192 -RALGL 196 + LGL Sbjct: 233 EQQLGL 238 >UniRef50_C1QE08 Ribonuclease n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QE08_9SPIR Length = 232 Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 118/199 (59%), Gaps = 11/199 (5%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVIL--------DPARP--IAGLNDSKKLSEK 52 E++ + + G+DEVGRG L G V AAVI+ + AR + +DSKK+S K Sbjct: 21 EYLSLGYKYICGIDEVGRGCLFGPVTVAAVIMPLELNNDVEVARENIVEEADDSKKISAK 80 Query: 53 RRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC 112 +R LY++I KAL +S+ + IDE+NI +AT LAM AV L+I P+ +LID + Sbjct: 81 KREELYDKIISKALCYSVYSVDAKTIDEINIYNATKLAMVNAVRNLNIKPDILLIDAVKL 140 Query: 113 PKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLE 172 + + ++ KGD + I ASI+AKV RD M L V+ +Y A++KGY T H++ Sbjct: 141 D-IDIKQCSITKGDFKSYSIGCASIVAKVERDRMMNELPEVYQKYKVAKNKGYGTKEHMK 199 Query: 173 KLAEHGATEHHRRSFGPVK 191 + +GA++ HR SF P+K Sbjct: 200 AIEMYGASDMHRYSFEPIK 218 >UniRef50_A5PBF7 Ribonuclease n=2 Tax=Erythrobacter RepID=A5PBF7_9SPHN Length = 211 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 93/192 (48%), Positives = 110/192 (57%), Gaps = 11/192 (5%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L+ GVDE GRGPL G VV AAV+L P GL+DSKKLS +R L +I+ + +W L Sbjct: 15 LIVGVDEAGRGPLAGPVVAAAVVLCKPCP-GGLDDSKKLSAAKRSKLEPQIQRRC-AWGL 72 Query: 71 GRAEPHEIDELNILHATMLAM----QRAVAGLHIAPEYVLIDGNRCP-----KLPMPAMA 121 EP ID LNI ATMLAM QR + L P VLIDGN P + PA A Sbjct: 73 AVVEPEVIDRLNIFGATMLAMTLATQRCIEALGAEPAEVLIDGNMTPHGRREEWRWPARA 132 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +V GD + ISAASILAK RD M P YG+ +KGY + H+E L HG T Sbjct: 133 IVGGDGKEACISAASILAKEYRDRIMVEAAKAHPHYGWENNKGYGSKSHMEALRLHGPTP 192 Query: 182 HHRRSFGPVKRA 193 HRRSF PV +A Sbjct: 193 LHRRSFAPVAQA 204 >UniRef50_A5N820 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2_CLOK5 Length = 288 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/181 (43%), Positives = 106/181 (58%), Gaps = 5/181 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILD-----PARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 VAG DEVGRGPL G +V AAVIL+ + I G+ DSKKL++K R L + IKEKAL Sbjct: 103 VAGTDEVGRGPLAGPIVAAAVILNLNYVEDKKLILGVKDSKKLTQKARYELSQTIKEKAL 162 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 S+S+ EID+ I +++AV GL + E VL DG LP+ V+KGD Sbjct: 163 SYSIAVINNKEIDKRGISWCNNEVLRKAVLGLKLPVELVLSDGYAVKNLPVRNEFVIKGD 222 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S+ I++ASI+AKV RD M V+ +Y F + GY T H+ + ++G + HR S Sbjct: 223 SKSVSIASASIIAKVYRDELMREYSKVYTEYNFQSNSGYGTKEHIGAIKKYGTCKIHRLS 282 Query: 187 F 187 F Sbjct: 283 F 283 >UniRef50_C2MC66 Ribonuclease n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MC66_9PORP Length = 204 Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/177 (46%), Positives = 106/177 (59%), Gaps = 2/177 (1%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGR 72 G DE GRG L G + AAVI L DSKKL+ K+R L I+E A +W++G Sbjct: 15 CGCDEAGRGALAGDLYAAAVIWPDTLDHPHLRDSKKLTAKQREELRHFIEEHATAWAVGV 74 Query: 73 AEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP--MPAMAVVKGDSRVP 130 A EI ++NILHA+MLAMQRA+ L PE +LIDGN P + +VKGD R Sbjct: 75 ATVQEIQQINILHASMLAMQRAIEALSCTPERLLIDGNYYDPRPDEVEYHTIVKGDDRYL 134 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASILAK RD M + +P YG+ Q+KGYPTA H E + +HG+ HR+ F Sbjct: 135 AIAAASILAKTHRDEYMTQQALEYPHYGWEQNKGYPTAQHREGIRQHGSCPLHRQGF 191 >UniRef50_B2S1N3 Ribonuclease HII n=2 Tax=Borrelia RepID=RNH2_BORHD Length = 181 Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 76/180 (42%), Positives = 109/180 (60%), Gaps = 5/180 (2%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARP--IAGLNDSKKLSEKRRLALYEEIKEKALSW 68 ++ G+DEVGRG + G V++AAVI P + L+DSKKL + +R L I E + + Sbjct: 1 MICGIDEVGRGCIFGPVLSAAVIF-KGNPNFLNELDDSKKLKKAKREYLSSLILENSY-Y 58 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM-AVVKGDS 127 + ID++NI HA++LAMQ A L I + VL+DG PK+ + A++KGDS Sbjct: 59 AFAEVSNETIDKINIHHASLLAMQIAYEKLDINCDLVLVDGKFIPKIKAKKIQAIIKGDS 118 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + EI AASI+AKV RD M + ++P Y ++KGYPT H E + +HG + HRRSF Sbjct: 119 IINEIKAASIIAKVQRDKLMDEYNKIYPLYALNKNKGYPTKEHKEAIKKHGISNLHRRSF 178 >UniRef50_C0E2A8 Ribonuclease n=2 Tax=Corynebacterium matruchotii RepID=C0E2A8_9CORY Length = 236 Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 83/190 (43%), Positives = 110/190 (57%), Gaps = 14/190 (7%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN---DSKKLSEKRRLALYEEIKEKALSW 68 VAGVDE GRG G + AA IL P++P+A L+ DSKKLS R AL+ I+ A++W Sbjct: 22 VAGVDEAGRGACAGPITIAACIL-PSQPLAALSRLTDSKKLSAATRAALFPLIQHHAVAW 80 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVL-----IDGNRCPKLPMPAMAVV 123 S+ +ID+ I HA + M+RAVA L + P YVL +DG C LP ++ Sbjct: 81 SILHISAADIDQYGIQHANVFGMRRAVALLDVQPGYVLTDALKVDGFACSYLP-----II 135 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD+ ISAAS+LAK RD MA L +P+Y FA HKGY T H+ + +GA+ H Sbjct: 136 GGDAAARCISAASVLAKHARDLVMAELAETYPRYEFASHKGYGTKVHMTAVRRYGASPVH 195 Query: 184 RRSFGPVKRA 193 R S+ V A Sbjct: 196 RYSYANVAAA 205 >UniRef50_C0QW88 Ribonuclease n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QW88_BRAHW Length = 226 Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 116/205 (56%), Gaps = 17/205 (8%) Query: 3 EFVYPHTQL------VAGVDEVGRGPLVGAVVTAAVI----------LDPARPIAGLNDS 46 +FVY L + G+DEVGRG L G V AAVI L + ++DS Sbjct: 11 KFVYEKEYLSLGYKYICGIDEVGRGCLFGPVTVAAVIMPLELYNENELKKENIVEEIDDS 70 Query: 47 KKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVL 106 KK+S K+R LY++I +KAL +S+ + IDE+NI +A LAM AV L+I P+ +L Sbjct: 71 KKISAKKREELYDKIIDKALCYSIYSVDSKTIDEINIYNAVKLAMVNAVNNLNIKPDILL 130 Query: 107 IDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP 166 ID + + + ++ KGD++ I ASI+AKV RD M L + +Y +++KGY Sbjct: 131 IDAVKLD-INIKQCSITKGDAKSYSIGCASIVAKVYRDRMMNELPDFYQKYKVSKNKGYG 189 Query: 167 TAFHLEKLAEHGATEHHRRSFGPVK 191 T H++ + +G ++ HR SF P+K Sbjct: 190 TKEHMKTIEMYGPSDMHRYSFEPIK 214 >UniRef50_A0LMM5 Ribonuclease HII n=10 Tax=Bacteria RepID=RNH2_SYNFM Length = 233 Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 87/186 (46%), Positives = 113/186 (60%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 QLVAG+DEVGRGPL G VV AAV++ + G+ DSKKLS +R + E+I Sbjct: 26 QLVAGIDEVGRGPLAGPVVAAAVVVPAGVRLPGVADSKKLSAGQRESCCEDILSCGCDVG 85 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 +GR EP EID +NIL AT AM AVAGL P +LIDG L + + +GD++ Sbjct: 86 IGRVEPSEIDRVNILQATFQAMIAAVAGLKTPPHCLLIDGPYELPLFIAQKGIPQGDAKS 145 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AASI+AKV RD M + +P YGF ++KGY TA HL+ L +G HR SFG Sbjct: 146 LSIAAASIVAKVHRDRLMCEYHLKYPVYGFDRNKGYGTARHLDALRRYGPCPIHRLSFGG 205 Query: 190 VKRALG 195 V+ + G Sbjct: 206 VRASEG 211 >UniRef50_A9NF30 Ribonuclease HII n=2 Tax=Bacteria RepID=RNH2_ACHLI Length = 202 Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 83/183 (45%), Positives = 108/183 (59%), Gaps = 2/183 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + GVDE GRGPL G VV AAVI + +NDSK LS K+R L+E IK+ AL+ + Sbjct: 20 ICGVDEAGRGPLAGPVVAAAVIFEKGFYHEDINDSKTLSAKKRETLFELIKQHALAIGVS 79 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 ID++NIL A AM+ A++ L I P+Y L D +P ++ GD Sbjct: 80 VVNHEVIDKINILEAARHAMEDAISKLKIKPQYALTDHMDIKGIPYTSIK--HGDQLSIS 137 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASI+AKVTRD M D V+PQYGF HKGY T HLE L +G + HR++F PV Sbjct: 138 IAAASIIAKVTRDKLMVDYDEVYPQYGFKDHKGYGTRKHLEALNLYGVSPIHRKTFAPVA 197 Query: 192 RAL 194 + L Sbjct: 198 KLL 200 >UniRef50_A5WDY2 Ribonuclease HII n=1 Tax=Psychrobacter sp. PRwf-1 RepID=RNH2_PSYWF Length = 302 Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 93/236 (39%), Positives = 121/236 (51%), Gaps = 55/236 (23%) Query: 14 GVDEVGRGPLVGAVVTAAVILDPA------------RPIAGLNDSKKLSEKRRLALYEEI 61 GVDEVGRGPL G+VV AA IL A P+A L DSKKL+E++R L+E + Sbjct: 57 GVDEVGRGPLYGSVVVAAAILPKAWSGETEVGLLQDTPLAILTDSKKLTERKREKLFEPV 116 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHI--------------APEY--- 104 K+ AL++ + IDE+NIL AT+L M+ A L + AP Sbjct: 117 KQHALAYLVVEVPAGVIDEINILQATILGMRVACEQLMVEITKVWRDASELPTAPSTPLG 176 Query: 105 --VLIDGNRCPKL------------------------PMPAMAVVKGDSRVPEISAASIL 138 +LIDGN+ P L A A VKGD+R I+AAS+L Sbjct: 177 FKLLIDGNKVPDLDEARLATHGICLADMTVTQPAGMVKFCAEAWVKGDARHNAIAAASVL 236 Query: 139 AKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRAL 194 AKV RD ++ A +P YG HKGYPT H+E +A G HRRSF PV++A+ Sbjct: 237 AKVYRDRQLIADGARYPGYGLEGHKGYPTKAHVEAIARLGVLPEHRRSFKPVQQAI 292 >UniRef50_A6W7V4 Ribonuclease HII n=5 Tax=Actinomycetales RepID=RNH2_KINRD Length = 262 Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 117/211 (55%), Gaps = 26/211 (12%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA--GLNDSKKLSEKRRLALYEE 60 +F+ LVAGVDEVGRG L G V +++D A A GL DSK L+ R AL + Sbjct: 17 QFLRAGHALVAGVDEVGRGSLAGPVSVGVLVVDAATRTAPTGLRDSKLLTPAAREALAPK 76 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN-------RCP 113 ++ A++ ++G AEP EID + I+ A LA +RA+A L + P+ V++DGN R P Sbjct: 77 VRRWAVASAVGHAEPGEIDAVGIVAALRLAGRRALAQLPVPPDLVILDGNHDWLSDPREP 136 Query: 114 KL--------------PMPAMAV---VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQ 156 L P PA AV VK D ++ AS+LAK TRDA M A FP Sbjct: 137 SLLDALDGLGDPAAGLPCPAPAVTTRVKADVTCAAVAGASVLAKTTRDALMTARHEEFPH 196 Query: 157 YGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 YG+A +KGY HLE LA HGA HRRS+ Sbjct: 197 YGWAGNKGYSAPDHLEALAAHGACPQHRRSW 227 >UniRef50_A5FW78 Ribonuclease HII n=3 Tax=Alphaproteobacteria RepID=RNH2_ACICJ Length = 199 Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 91/183 (49%), Positives = 114/183 (62%), Gaps = 3/183 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARP--IAGL-NDSKKLSEKRRLALYEEIKEKALS 67 +VAGVDEVGRGPL G VV AA IL P IA L +DSK+LS +R A + E + Sbjct: 13 VVAGVDEVGRGPLAGPVVAAAAILPADLPPEIAALIDDSKRLSPAQREAALAALIESGAA 72 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 S A EI LNIL A++LAM+RAVA L + P++VL+DG P LPMP VV GD Sbjct: 73 ISAAAASVAEIARLNILQASLLAMRRAVARLAVRPDHVLVDGQVAPDLPMPCTPVVGGDG 132 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASI AK+ RD M+ LD +P YG+A++ GY T H + + G T HHRR F Sbjct: 133 LSLSIAAASIAAKLVRDRAMSRLDRRYPGYGWARNSGYGTKTHRDAILGLGITPHHRRGF 192 Query: 188 GPV 190 GP+ Sbjct: 193 GPL 195 >UniRef50_Q5SLU5 Ribonuclease HII n=8 Tax=Deinococci RepID=RNH2_THET8 Length = 203 Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 85/183 (46%), Positives = 113/183 (61%), Gaps = 3/183 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 LVAG+DE GRG G +V AV+L P DSK LS K R L E++KE AL+++L Sbjct: 16 LVAGLDEAGRGAWAGPIVVGAVVLPPGE--YPFRDSKLLSPKARERLAEKVKEVALAFAL 73 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G AE E+D L +L AT+LA +RA+ L +APE ++ D P+P ++ K D + P Sbjct: 74 GVAEAAEVDRLGVLKATLLAAERALLSLPLAPEALVTD-YLPLPTPLPLLSPPKADEKSP 132 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ++AASILAKV RD M LD ++P YGFA+HKGY T H E L G + HR+ F PV Sbjct: 133 TVAAASILAKVHRDRIMDELDRLYPGYGFARHKGYGTQEHQEALLALGPSPVHRKRFAPV 192 Query: 191 KRA 193 +A Sbjct: 193 AQA 195 >UniRef50_Q5PBG2 Ribonuclease HII n=6 Tax=Anaplasmataceae RepID=RNH2_ANAMM Length = 243 Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 81/186 (43%), Positives = 113/186 (60%), Gaps = 6/186 (3%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARP---IAGLNDSKKLSEKRRLALYEEIKEKALS 67 ++ GVDEVG G + G VV AAV L P R I + DSK LS K+R L+ +I A Sbjct: 24 VIVGVDEVGYGAIAGPVVAAAVYL-PERECDYIKDIKDSKALSSKKREELFCKITAHA-K 81 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGD 126 + +G A EI++ NIL A+ ++M+RA+ L + + VL+DG+R P LP +VKGD Sbjct: 82 YGVGFARVREIEQHNILVASHISMKRALQNLGVKADLVLVDGSRAPAGLPWAVKTIVKGD 141 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S I+AASI+AKVTRD M L +P+Y + Q+ GY T H++ L +G T HR + Sbjct: 142 SISTSIAAASIIAKVTRDRFMRRLHEQYPEYAWNQNCGYGTKAHMQSLKLYGKTAQHRST 201 Query: 187 FGPVKR 192 F PVK+ Sbjct: 202 FAPVKQ 207 >UniRef50_A5CDI4 Ribonuclease HII n=17 Tax=Rickettsieae RepID=RNH2_ORITB Length = 205 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 81/179 (45%), Positives = 112/179 (62%), Gaps = 2/179 (1%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 +++VAGVDE GRGPL G VV AAV+++ + I + DSK LS+ +R + Y++I + + Sbjct: 13 SEIVAGVDEAGRGPLAGPVVAAAVVVNQSIMIDDIKDSKVLSKSKRESCYDKITN-SYYY 71 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 S+G A EID+ NIL AT LA RAV L I P VL+DGN +++V+GD Sbjct: 72 SIGIASVQEIDKYNILEATKLACIRAVKNLAIIPTKVLVDGNM-NFTDNRFISIVRGDQI 130 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 IS+ASI+AKVTRD M L +P YG+ Q+ GY T H++ + +G T HHR SF Sbjct: 131 CYSISSASIVAKVTRDRIMQILHKEYPVYGWNQNCGYGTKLHIDAIKTYGQTIHHRVSF 189 >UniRef50_A9B6H3 Ribonuclease HII n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=RNH2_HERA2 Length = 207 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 83/186 (44%), Positives = 110/186 (59%), Gaps = 5/186 (2%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAV-----ILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 ++VAGVDEVGRG G VV AAV +L+ +AG+NDSK LS + R A+ ++I+ Sbjct: 17 RIVAGVDEVGRGCWAGPVVAAAVSFPTHLLNDPVALAGINDSKTLSAEARQAMAQQIRHL 76 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A LG H ID I AT AM AV L P+ ++ID + P+LP+ ++ K Sbjct: 77 ASGIGLGVVSAHLIDLFGIAEATKWAMMHAVLSLPSLPDGLVIDWVKLPELPLLQRSLPK 136 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD+ ++AASI+AKV RD M D P+YG+A HKGY TA H LA HG + HR Sbjct: 137 GDAISISVAAASIIAKVYRDNLMHEYDQRDPRYGWAAHKGYGTAQHQRALAAHGPSGLHR 196 Query: 185 RSFGPV 190 RSF P+ Sbjct: 197 RSFKPL 202 >UniRef50_C6PQZ2 Ribonuclease n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQZ2_9CLOT Length = 293 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 105/181 (58%), Gaps = 5/181 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL-----DPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 +AGVDEVGRGPL G + +V+L D + G+ DSKKLS R L + IK K++ Sbjct: 102 IAGVDEVGRGPLAGPIAAGSVVLNLRSHDFKDLLLGIKDSKKLSHDTRERLSKLIKAKSI 161 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 S+++ EIDE I ++RA +GL I P+ VL DG L + V+KGD Sbjct: 162 SYNISVINNAEIDERGIAWCNNEVLRRAASGLKITPDLVLSDGYAVKNLNIENEFVIKGD 221 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 ++ I+ ASI+AKV RD M ++PQYGF ++ GY T H+E + ++G + HR+S Sbjct: 222 AKSASIACASIIAKVYRDNLMQEYAKIYPQYGFERNSGYGTEEHIEAIKKYGICKIHRKS 281 Query: 187 F 187 F Sbjct: 282 F 282 >UniRef50_Q14PF8 Ribonuclease n=1 Tax=Spiroplasma citri RepID=Q14PF8_SPICI Length = 207 Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 1/189 (0%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 YP+T ++AG DE GRG L G +V +AVIL + DSKK++ K+R+ L +EI A Sbjct: 12 YPNTTILAGTDEAGRGCLAGPLVVSAVILPLDYVNDEIKDSKKITAKQRIKLADEIMSIA 71 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 +S+++ +ELN A++ MQ+A+ L + + +L D + A++KG Sbjct: 72 ISYTIEIISVAMFEELNPKQASIFGMQQAIDNLMVKSDIILTDAEKLGP-SYNHQAIIKG 130 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 DS I AASILAKVTRD M D +PQY F +KGY T HL L + G T HR+ Sbjct: 131 DSLSQSIVAASILAKVTRDNLMLKFDQDYPQYDFKNNKGYGTKKHLLALQQFGITSLHRK 190 Query: 186 SFGPVKRAL 194 ++ PV+ + Sbjct: 191 TYRPVRETM 199 >UniRef50_B2KC56 Ribonuclease n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC56_ELUMP Length = 210 Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 75/195 (38%), Positives = 109/195 (55%), Gaps = 4/195 (2%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVIL--DPARPIAGLNDSKKLSEKRRLALYE 59 E + ++ + G+DE GRGPL G VV AV + +NDSKKL++ +R +Y Sbjct: 9 CEILQKNSCALIGIDEAGRGPLAGPVVACAVCAPKEIYHLFEDVNDSKKLTDVKREKIYA 68 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAG-LHIAPEYVLIDGN-RCPKLPM 117 I +++ +G A EIDE+NIL AT LAM+RA L I L+DGN + + Sbjct: 69 RINGYKIAYGVGFASAKEIDEINILQATFLAMRRACQKFLDINEALALVDGNHKIKDFLL 128 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 P V+ GD++ I+ AS++AKV RD M ++P YGF HKGY + H+ + EH Sbjct: 129 PQQTVIDGDAKSFSIAMASVIAKVHRDRYMRKAHELYPVYGFDGHKGYGSGKHIAAIKEH 188 Query: 178 GATEHHRRSFGPVKR 192 G + HR +F P+K Sbjct: 189 GPCKEHRMTFAPLKN 203 >UniRef50_C4LJB6 Ribonuclease n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJB6_CORK4 Length = 261 Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 2/186 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL--DPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDE GRG G + AA IL P P+ L DSKKLS R L+ IK+ A SWS Sbjct: 68 VAGVDEAGRGACCGPMAIAACILPAKPIHPLDKLTDSKKLSPTMREKLFPIIKDSAESWS 127 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + +ID+ + + M+RAV L P YVL D R L P + ++ GDS Sbjct: 128 VILIPAADIDKYGVQAMNIAGMRRAVGVLDQRPHYVLTDAMRVDGLTQPHLPIIGGDSAA 187 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AAS+LAKVTRD M L +P YG +HKGY TA H++ + HG T HR ++ Sbjct: 188 RCIAAASVLAKVTRDRYMCDLAERYPGYGLEKHKGYGTAQHIDAVRLHGGTPEHRYTYRN 247 Query: 190 VKRALG 195 V A+G Sbjct: 248 VAEAVG 253 >UniRef50_Q7U4C6 Ribonuclease HII n=18 Tax=Cyanobacteria RepID=RNH2_SYNPX Length = 224 Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 89/195 (45%), Positives = 111/195 (56%), Gaps = 9/195 (4%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIK 62 P + VAGVDEVGRG L G V AV+L+ A GL DSK+LS +RR L I+ Sbjct: 33 PCHRGVAGVDEVGRGCLFGPVFAGAVVLEAANASRLQQEGLTDSKRLSARRRGDLVPLIE 92 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPA--M 120 +A +W LG++ EID L I AT LAM RA+ L PE VL+DGN P P Sbjct: 93 HEAEAWGLGQSSTREIDRLGIRPATELAMLRALQRLPNRPELVLVDGN-LPLRPWTGEQR 151 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 ++V GD I+AAS++AK RDA M L FP YG +H GY TA H L + G + Sbjct: 152 SIVAGDQHSLAIAAASVIAKQCRDALMQRLSQRFPGYGLERHAGYGTALHRAALLDLGPS 211 Query: 181 EHHRRSFGPVKRALG 195 HRRSF ++R LG Sbjct: 212 ALHRRSF--LRRFLG 224 >UniRef50_Q1IMM1 Ribonuclease HII n=2 Tax=Acidobacteria RepID=RNH2_ACIBL Length = 254 Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 82/185 (44%), Positives = 113/185 (61%), Gaps = 9/185 (4%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +L+AG+DEVGRG L G VV AAVILDP I GL DSK L + R L + I+E ++WS Sbjct: 46 KLIAGIDEVGRGALFGPVVAAAVILDPNYRIKGLRDSKLLPAETREILSKRIREHCIAWS 105 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR----CPKLPMPAMAVVKG 125 + + ID+LNI A+ LAM+ AV GL P+++LID + C + P ++ G Sbjct: 106 IAAVDVARIDQLNIYWASNLAMKHAVRGLSCQPDHLLIDAMKLDLDCAQTP-----IIHG 160 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D+ I+AASI+AKV RDA + +FP+Y A +KGY H++ L E G + HR+ Sbjct: 161 DALSASIAAASIIAKVHRDALIREWAPIFPEYDLASNKGYSAPKHIKALREFGPSPLHRQ 220 Query: 186 SFGPV 190 SF PV Sbjct: 221 SFAPV 225 >UniRef50_Q4A278 Putative ribonuclease n=2 Tax=dsDNA viruses, no RNA stage RepID=Q4A278_EHV86 Length = 209 Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/191 (39%), Positives = 113/191 (59%), Gaps = 12/191 (6%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGL-NDSKKLSEKRRLALYEEIK-EKALS 67 +V GVDE GRG L G VV A + PI L DSKK++EK+R+ +E + + Sbjct: 20 NIVVGVDEAGRGCLAGPVVAGACFVPENEPIHPLIKDSKKMTEKQRMEAFEYLTLNSNIK 79 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAV--AGLHIAPEYVLIDGNRCPKLPMPAMAV--- 122 EP+EID++NIL+ATM AM + +G ++A L+DG++ PK+ + + Sbjct: 80 CYASFIEPYEIDDINILNATMKAMGNVINESGANLA----LVDGDKTPKMFVDTSEIQTF 135 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGDSR+ IS AS++AKV+RD M L +P+YGFA H GY T H+ + ++G Sbjct: 136 IKGDSRMYSISCASVIAKVSRDLYMEELSKTYPEYGFANHMGYGTQAHMAAIEKNGPIPF 195 Query: 183 -HRRSFGPVKR 192 HR S+ P+K+ Sbjct: 196 VHRYSYAPIKK 206 >UniRef50_B9XLY3 Ribonuclease n=1 Tax=bacterium Ellin514 RepID=B9XLY3_9BACT Length = 245 Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 79/191 (41%), Positives = 106/191 (55%), Gaps = 8/191 (4%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPA-------RPIAGLNDSKKLSEKRRLALYEEI 61 T LVAGVDE G GPL G VV AAV+ + + GLNDSK+L E +R Y I Sbjct: 22 TTLVAGVDEAGCGPLAGPVVAAAVLFPCSWLEAGLFSKLRGLNDSKQLDEDQREKFYNII 81 Query: 62 -KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 + ++ + ID +NI A M +A+ L+ P++VL+DG + LP Sbjct: 82 VNHPEIRHAIAVIDVEMIDRINIRQAAWRGMNQALDQLNPKPQHVLVDGLKIKWLPYAQT 141 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 A+V+GD + I+AAS+LAKVTRD M D +P YGFA+HKGY T HL + G Sbjct: 142 ALVQGDGKSYSIAAASVLAKVTRDRLMQDYDKQYPGYGFAEHKGYGTPKHLAAINAQGPC 201 Query: 181 EHHRRSFGPVK 191 HR+SF P + Sbjct: 202 LIHRKSFAPFR 212 >UniRef50_Q67PD4 Ribonuclease HII 1 n=1 Tax=Symbiobacterium thermophilum RepID=RNH21_SYMTH Length = 259 Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 78/174 (44%), Positives = 112/174 (64%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +AG+DEVGRGPL G VV AAVIL + G+ ++K+LS++RR+ LY I+E A++ +G Sbjct: 70 IAGIDEVGRGPLAGPVVAAAVILPGEVELPGIEEAKRLSDRRRMELYRRIREVAVAVGVG 129 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 +P IDE +++ AT AM +AVA L + P+Y+LIDG P + P + VV G++ Sbjct: 130 LVQPEGIDEASVVVATYKAMMKAVADLPVTPDYLLIDGVHLPNVSQPQVPVVGGETLSCS 189 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 I+AA+++AKV RD M +D +P YGFA HKGY T H L +G HR+ Sbjct: 190 IAAAAVVAKVVRDEYMVEMDAKYPAYGFAHHKGYGTPEHRLALERYGPCPIHRK 243 >UniRef50_B0N757 Ribonuclease n=4 Tax=Bacteria RepID=B0N757_9FIRM Length = 206 Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 8/186 (4%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGP+ G +V A V+ +NDSK+LS K+R LY+ I E AL + + Sbjct: 18 IIGLDEAGRGPMAGELVVAGVVFPKGFYDERINDSKQLSAKKREVLYDLIIENALYYDIE 77 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPA---MAVVKGDSR 128 ++D LN+ A+ M++ + L + L D +P+ ++++KGD++ Sbjct: 78 IISVADVDRLNVYQASKQGMEKCLELLKKEKMFALTDA-----MPIDYPDHLSIIKGDAK 132 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+ ASILAKVTRD M A + +P+YGF +HKGY T H E L ++G HR+SFG Sbjct: 133 SISIAGASILAKVTRDRLMEAYALEYPEYGFEKHKGYVTKAHKEALGKYGVCPIHRKSFG 192 Query: 189 PVKRAL 194 PV++ L Sbjct: 193 PVQKIL 198 >UniRef50_Q2JW45 Ribonuclease HII n=5 Tax=Cyanobacteria RepID=RNH2_SYNJA Length = 221 Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 84/184 (45%), Positives = 110/184 (59%), Gaps = 6/184 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL----DPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 VAGVDEVGRG L G VV AAVIL DP ++G+ D K+L +R E I + AL+ Sbjct: 31 VAGVDEVGRGALAGPVVAAAVILPAHLDP-EALSGVRDCKQLRPPQRAHWAERIAQVALA 89 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 +G A EID+LNI AT+LAMQRA+A + E++L+DG +L A+VKGD Sbjct: 90 VGIGSASAAEIDQLNIRQATLLAMQRALAQVGEV-EHILLDGLPLAELGSRQTALVKGDQ 148 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASI+AKV RD M + D +P YG+ + GY T H L G + HRRSF Sbjct: 149 LSLSIAAASIVAKVWRDTLMQSWDHQYPGYGWRTNVGYGTQEHRLALQRLGPSPQHRRSF 208 Query: 188 GPVK 191 P++ Sbjct: 209 APLR 212 >UniRef50_Q3B6X8 Ribonuclease HII n=5 Tax=Chlorobiaceae RepID=RNH2_PELLD Length = 208 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/182 (45%), Positives = 107/182 (58%), Gaps = 6/182 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL----DPARPI-AGLNDSKKLSEKRRLALYEEIKEKAL 66 V G+DE GRGPL G VV AAV+ P I LNDSKKL+ R L I+E+A Sbjct: 19 VCGIDEAGRGPLAGPVVAAAVVFPRWFSPDEGILRRLNDSKKLTPSLRRELAPAIREEAE 78 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKG 125 W++ + ID +NIL ATMLAM RA L P+ +LIDGNR P +P+P +V G Sbjct: 79 CWAVEAVDHETIDRINILRATMLAMNRAAESLPRQPDLLLIDGNRFTPNIPVPYQTIVGG 138 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D+ V I+AAS+LAK RD M +P+YGF ++ GY T H+E + HG + HR Sbjct: 139 DALVFSIAAASVLAKTERDRMMEEYAERYPEYGFERNAGYGTREHVEAIRRHGRSPIHRT 198 Query: 186 SF 187 SF Sbjct: 199 SF 200 >UniRef50_C7MY90 Ribonuclease n=3 Tax=Actinomycetales RepID=C7MY90_SACVD Length = 275 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 85/178 (47%), Positives = 104/178 (58%), Gaps = 2/178 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPAR--PIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 V GVDE GRG G +V AA +L P + L DSK L+ R +YE I +AL +S Sbjct: 31 VVGVDEAGRGACAGPLVVAACVLRPGDGAKLPELADSKSLTPLARDRVYERILRRALDYS 90 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + P EID + A + M+RAVA L P YVL+DG R P LP P++ V+KGD V Sbjct: 91 IVVIPPAEIDVQGVHTANIEGMRRAVAALSQRPGYVLLDGFRVPGLPAPSVPVLKGDRAV 150 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ++AAS+LAKVTRD M L +P YGF HKGY T H LAEHG E HR SF Sbjct: 151 ACVAAASVLAKVTRDRIMVGLHAEYPVYGFEVHKGYTTVEHRTALAEHGPCEAHRWSF 208 >UniRef50_A9TVJ6 Ribonuclease n=2 Tax=cellular organisms RepID=A9TVJ6_PHYPA Length = 655 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/216 (41%), Positives = 107/216 (49%), Gaps = 36/216 (16%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAG------------------------LNDSK 47 VAGVDE GRGPL G VV AA I+ + I G LN Sbjct: 433 VAGVDEAGRGPLAGPVVAAACIIPASATIPGKICFCVSQWSCRASGPCQEEPYVRLNGVA 492 Query: 48 KLSEKRRLALYEEIKEKALSWSLGRAEPH-----EIDELNILHATMLAMQRAVAGLHI-- 100 + E + +E SW + H +IDE+NIL AT+LAM V L Sbjct: 493 QWKETFTVHHLWMSRELWCSWFRVAGQIHVVDAAKIDEINILQATLLAMSTCVKKLRKER 552 Query: 101 ---APEYVLIDGNRCPK--LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFP 155 AP+Y+LIDGNR P A V+KGD+ I+AASILAKVTRD M D +P Sbjct: 553 GGEAPDYILIDGNRIPDELSKEEAQFVIKGDAECHVIAAASILAKVTRDRMMVDYDRRWP 612 Query: 156 QYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 YGF HKGY TA H+ L HG + HRRSF P+K Sbjct: 613 VYGFKAHKGYGTAAHIGALLNHGPCDIHRRSFAPLK 648 >UniRef50_Q6AJE5 Ribonuclease HII n=1 Tax=Desulfotalea psychrophila RepID=RNH2_DESPS Length = 225 Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/191 (42%), Positives = 114/191 (59%), Gaps = 3/191 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 ++AG DEVGRGPL G V+ AAVIL DSK LS K+R+ L++ + E + Sbjct: 29 IIAGTDEVGRGPLAGPVIAAAVILPADCDHHLFQDSKILSHKKRVHLFQLLTEIDAFIGI 88 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIA---PEYVLIDGNRCPKLPMPAMAVVKGDS 127 G IDE+NIL A++LAM+ A+ L P ++L+DG + + +A++KG+S Sbjct: 89 GTVSEKIIDEINILQASLLAMKLAIEDLASNCSRPSFLLVDGKFKVPIDLAQVALIKGES 148 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + I+AASI+AKVTRD M L +PQYGF + GYPT H E + E G T +HRRSF Sbjct: 149 KSASIAAASIVAKVTRDRYMQDLHSQYPQYGFNTNSGYPTKKHREAIGEFGITCYHRRSF 208 Query: 188 GPVKRALGLAS 198 VK + ++ Sbjct: 209 KGVKEYVDISQ 219 >UniRef50_A5HUH4 Ribonuclease n=1 Tax=uncultured bacterium RepID=A5HUH4_9BACT Length = 229 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/198 (43%), Positives = 105/198 (53%), Gaps = 23/198 (11%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPI---AGLNDSKKLSEKRRLALYEEIKEKALS- 67 V GVDE GRGP G V AA + PA A L DSKKLS +R + E+AL Sbjct: 31 VIGVDEAGRGPWAGPVTAAAFWIYPAAKDSLPASLTDSKKLSASKRQQI-----EQALCA 85 Query: 68 ------WSLGRAEPHEIDELNILHATMLAMQRAVAGL-------HIAP-EYVLIDGNRCP 113 W++ + ++ID IL AT AM AVA L H P VL+DGN P Sbjct: 86 PHSQHLWAVKHSSVNQIDTCGILPATFAAMAEAVAELAKTLQKRHNLPVAMVLVDGNLLP 145 Query: 114 KLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEK 173 L P AVV+GDSR I+AASILAK +RD M L +P YG+ + GY T H + Sbjct: 146 PLDFPCQAVVRGDSRSLSIAAASILAKQSRDEVMTELASHYPDYGWQTNAGYGTKAHQQA 205 Query: 174 LAEHGATEHHRRSFGPVK 191 L G T HHR+SF P+K Sbjct: 206 LQRCGITPHHRKSFAPIK 223 >UniRef50_Q04F44 Ribonuclease n=2 Tax=Oenococcus oeni RepID=Q04F44_OENOB Length = 209 Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 1/185 (0%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 Q++AG+DEVGRG + G VV + IL ++ DSK+ ++++R L EEIK+ + ++ Sbjct: 26 QIIAGIDEVGRGCVAGPVVACSCILPANFNVSETYDSKRFNKRQRFLLEEEIKKTSCLFA 85 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 G A EID +NI + LAM+R+V L P+ +LID L + + ++ GD Sbjct: 86 FGEASVTEIDLINIYQSARLAMKRSVMNLLQMPDALLIDA-MAVDLNLKQLKIIHGDQLS 144 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AASILAK RD M + +P+YGF ++ GY T+ + L E+G T HR++F P Sbjct: 145 NSIAAASILAKCHRDRIMIKMAEKYPEYGFERNVGYLTSEAKKALLEYGITPIHRKTFAP 204 Query: 190 VKRAL 194 + + + Sbjct: 205 ISKLI 209 >UniRef50_Q0SPB8 Ribonuclease HII n=18 Tax=Bacteria RepID=RNH2_BORAP Length = 181 Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 109/180 (60%), Gaps = 5/180 (2%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARP--IAGLNDSKKLSEKRRLALYEEIKEKALSW 68 ++ G+DEVGRG + G +++AAV+ +P I L+DSKKL++++R L I E + + Sbjct: 1 MICGIDEVGRGCIFGPILSAAVVF-KKKPNFIKELDDSKKLTKEKREYLSSLILENSY-Y 58 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM-AVVKGDS 127 + G I+++NI +A++LAMQ A L + V IDG PK+ + A++KGDS Sbjct: 59 AFGEISNITIEKINIHNASLLAMQTAYENLKLNCNLVFIDGKFVPKISAKNVKAIIKGDS 118 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + EI AASI+AKV RD M D ++P Y ++KGYPT H + ++G HR++F Sbjct: 119 IIDEIKAASIIAKVKRDKLMDEYDKIYPLYLLKKNKGYPTKEHKNAIKKYGVLSLHRKNF 178 >UniRef50_Q11R91 Ribonuclease HII n=55 Tax=Bacteroidetes RepID=RNH2_CYTH3 Length = 202 Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 78/180 (43%), Positives = 107/180 (59%), Gaps = 2/180 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 ++ AG+DE GRG + G VV AAVIL P + LNDSKKL+ K+R L ++I AL + Sbjct: 13 KIEAGLDEAGRGCMAGPVVAAAVILPPNYKHSLLNDSKKLTIKQRELLRQDIIRDALDYH 72 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGL-HIAPEYVLIDGNRCPKLP-MPAMAVVKGDS 127 + ID++NIL+ATM AM +AV GL P +LIDGNR + + + +V+GD Sbjct: 73 VAEVSHTVIDQINILNATMKAMHKAVKGLKKQQPNLLLIDGNRFKQYTGIEHVCIVQGDG 132 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AAS+LAK RD+ M L P+YG+ + GY T H + HG T +HR SF Sbjct: 133 LYLSIAAASVLAKTHRDSLMERLAKEHPEYGWDVNAGYATEKHRLAMETHGLTPYHRTSF 192 >UniRef50_A6WW84 Ribonuclease HII n=4 Tax=Rhizobiales RepID=RNH2_OCHA4 Length = 220 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/182 (45%), Positives = 104/182 (57%), Gaps = 2/182 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGPL G VV AAV+LD GL+DSK+L+ +R ALYE I EKA++ S+ Sbjct: 34 IVGIDEAGRGPLAGPVVAAAVVLDIDNLPNGLDDSKRLTAVKREALYETILEKAITVSVA 93 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSRVP 130 ID +I A + AM+RA GL + P + LIDG P LP P A+VKGD R Sbjct: 94 SLSARSIDASDIRKAALEAMRRASVGLTLQPCHALIDGRDVPPGLPCPGSALVKGDQRSV 153 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH-HRRSFGP 189 I+AASI+AKVTRD M P YG H GY T H + G HR +F P Sbjct: 154 SIAAASIVAKVTRDRMMIRAGAAHPPYGLEIHAGYATVKHRAAIETTGPVPGIHRYTFAP 213 Query: 190 VK 191 +K Sbjct: 214 IK 215 >UniRef50_A9BI79 Ribonuclease n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BI79_PETMO Length = 208 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 104/190 (54%), Gaps = 9/190 (4%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGL----NDSKKLSEKRRLALYEEIKEKALS 67 + G+DE GRGPL G V AV+++ + L DSK LS K+R Y +I Sbjct: 16 IIGIDEAGRGPLAGPVFVGAVVIESKKEGELLAKIGKDSKSLSPKQRERRYFQITRNFKY 75 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNRCPKLPMPAMAVVK 124 +S + IDE+NI AT LAM + + + + YV+IDG + KL +VK Sbjct: 76 YS-NFSTSQLIDEINIFKATELAMIKLLEKIVEENANDYYVIIDG-KFFKLDYNYDCIVK 133 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD P I AASI+AK RD M L ++P YGF HKGYPT H+E + ++G HR Sbjct: 134 GDQTSPLIGAASIVAKYERDIYMNQLHELYPNYGFITHKGYPTRKHIESIKKYGIISEHR 193 Query: 185 RSFGPVKRAL 194 ++F P+KR + Sbjct: 194 KTFNPIKRFI 203 >UniRef50_A7I0I5 Ribonuclease HII n=7 Tax=Campylobacter RepID=RNH2_CAMHC Length = 185 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 6/177 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGPL G + A IL+ + I GL DSKKLSEKRR LYEEI + + ++ + Sbjct: 3 ICGIDEAGRGPLAGPLHIAGCILN--KQIEGLKDSKKLSEKRREILYEEIIKNS-TYKIV 59 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM-AVVKGDSRVP 130 + +ID+ + L + V ++ DGN K +VK D ++ Sbjct: 60 KFSAAQIDKFGLSKCLKLGLNELVDFFAPFEVKIIFDGN--SKFGAEGFETMVKADDKIK 117 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 E+SAASILAKV+RD M DI FP Y FA++KGY + H+E + ++G E HR+SF Sbjct: 118 EVSAASILAKVSRDRVMRNFDIKFPFYDFAKNKGYGSKAHIEAIQKYGYCEIHRKSF 174 >UniRef50_Q30TX0 Ribonuclease n=4 Tax=Helicobacteraceae RepID=Q30TX0_SULDN Length = 188 Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/179 (40%), Positives = 110/179 (61%), Gaps = 12/179 (6%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGP+ G +V A IL+ + GLNDSKKL+EK+R ALYE I + + S+ + Sbjct: 5 LCGIDEAGRGPIAGDLVVAGCILNS--HVDGLNDSKKLNEKKREALYEIIIKNS-SYHIV 61 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGL--HIAPEYVLIDGNRCPKLP-MPAMAVVKGDSR 128 + EID+ + + M++A+ + ++ + L DGN + +P M +K D + Sbjct: 62 KFSAKEIDD----NGISICMKKALLEIMKNLTCKEYLFDGNTNFGINNLPTM--IKADGK 115 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 +PE+SAASILAKVT D + +PQY F +HKGY TA H+E + ++G E HR+S+ Sbjct: 116 IPEVSAASILAKVTHDRNIINDAKKYPQYQFQKHKGYGTALHVEMIKKYGYCEIHRKSY 174 >UniRef50_C6HV29 Ribonuclease n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HV29_9BACT Length = 195 Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/186 (43%), Positives = 102/186 (54%), Gaps = 15/186 (8%) Query: 14 GVDEVGRGPLVGAVVTAAVILD-PARPIA--GLNDSKKLSEKRRLALYEEIKEKALSWSL 70 GVDEVGRGPL G VV A V P ++ G+ DSK LS RR L I +A SL Sbjct: 2 GVDEVGRGPLAGPVVAACVFFSAPVSRLSRLGIADSKSLSSDRRDELSRLIHTEADHVSL 61 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC---------PKLPMPAMA 121 G + E++ELN+ AT LAM RA+ L P +++ D C P + + Sbjct: 62 GWSSVDEVNELNVRQATFLAMNRALQQL---PPFLMRDSRLCVAVDGRDKIPGVEIQQRT 118 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 VV GD V ++AASI+AKV RD+ M LD +FP YGFA+HKGY T H + G + Sbjct: 119 VVGGDRTVLSVAAASIVAKVARDSYMEKLDALFPGYGFAKHKGYGTEEHRNAILRLGLSP 178 Query: 182 HHRRSF 187 HHR F Sbjct: 179 HHRPLF 184 >UniRef50_C7PK08 Ribonuclease n=23 Tax=Bacteria RepID=C7PK08_CHIPD Length = 220 Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 77/176 (43%), Positives = 105/176 (59%), Gaps = 1/176 (0%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGR 72 AG DE GRG L G V AAVIL P LNDSK+L R L E ++++A+++++ Sbjct: 14 AGCDEAGRGCLAGPVFAAAVILPPKFRNKLLNDSKQLKASDRDKLREVVEKEAIAYAVAS 73 Query: 73 AEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKGDSRVPE 131 + EID +NIL A+ AM A+ L P Y+L+DGNR P P +VKGD Sbjct: 74 VDNLEIDRINILKASFRAMHLALDQLKQQPGYILVDGNRFVPYGKTPHACIVKGDGIYAS 133 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASILAK RD M L +P +G+ ++KGYPT FH + + HG T +HR++F Sbjct: 134 IAAASILAKTYRDEYMHKLHQEYPHFGWLENKGYPTLFHRDAIRAHGETPYHRKTF 189 >UniRef50_Q7UZZ2 Ribonuclease HII n=7 Tax=Prochlorococcus marinus RepID=RNH2_PROMP Length = 209 Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 73/179 (40%), Positives = 103/179 (57%), Gaps = 5/179 (2%) Query: 14 GVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLALYEEIKEKALSWS 69 G+DEVGRG + G V + AV+L + G+NDSKKL+ K+R + +I + ++ Sbjct: 24 GIDEVGRGSVFGPVFSVAVVLSKKSGLTLKKLGVNDSKKLTPKKRKDFFPKIIALSSDYA 83 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL-PMPAMAVVKGDSR 128 LG++ EID L I HAT L+M RAV L P +LIDG +L ++ GDS+ Sbjct: 84 LGQSSVREIDLLGIRHATELSMIRAVKKLKHMPSELLIDGPLTLRLWEGNQRNIISGDSK 143 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+ ASI+AKV RD+ M L+ +P Y ++KGY T H L +HG T HR+SF Sbjct: 144 FISIATASIIAKVMRDSLMERLESKYPGYFIFKNKGYGTKQHFSSLKKHGLTNLHRKSF 202 >UniRef50_D1N706 Ribonuclease n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N706_9BACT Length = 223 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 88/182 (48%), Positives = 110/182 (60%), Gaps = 2/182 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE-KALSWS 69 VAGVDEVGRGPL G VV AAV+ P G+ DSK+L R L EI+ + Sbjct: 29 FVAGVDEVGRGPLAGPVVAAAVVFPRGVPWPGVYDSKQLKAADRERLDREIRSVPGVRIG 88 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 +G EID +NIL+AT AM+ AV +++L+DG LP P+ A+VKGDSR Sbjct: 89 IGEVPVEEIDRINILNATHRAMREAVLAAGEV-DFILVDGRPVKNLPCPSRALVKGDSRS 147 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AASI+AKV RD M LD+ +P YGF +HKGY TA HLE L G HR+SF P Sbjct: 148 ASIAAASIVAKVYRDRLMDELDLRWPGYGFKEHKGYGTAAHLESLRRLGPCPAHRKSFRP 207 Query: 190 VK 191 V+ Sbjct: 208 VR 209 >UniRef50_B9L043 Ribonuclease n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L043_THERP Length = 219 Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 82/182 (45%), Positives = 113/182 (62%), Gaps = 5/182 (2%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG-LNDSKKLSEKRRLALYEEIKEKALS 67 + VAGVDEVGRG L G VV AA I +P+ + L DSK+L++ +R AL + +++ +L Sbjct: 31 NRWVAGVDEVGRGALAGPVVAAACIFEPSTELPDQLRDSKRLTDPQRRALADWVRQYSLR 90 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP-EYVLIDGNRCPKLP-MPAMAVVKG 125 W++G A E+D L I+ AT LAM RA+ + P ++VL DG + +P AVV G Sbjct: 91 WAIGAASHREVDRLGIVRATALAMLRALQ--RLGPVDHVLYDGLPLTEFERLPGTAVVHG 148 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D R I+AASILAKV RD MA L + +P YG+ ++ GY T H + E G+T HRR Sbjct: 149 DMRCASIAAASILAKVIRDDLMARLAVRYPGYGWEENAGYGTPSHRRAIRELGSTPFHRR 208 Query: 186 SF 187 SF Sbjct: 209 SF 210 >UniRef50_C7MNC1 Ribonuclease n=2 Tax=Coriobacteriaceae RepID=C7MNC1_CRYCD Length = 262 Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 6/178 (3%) Query: 14 GVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGRA 73 G+DEVGRGPL G + AAV+L A IA LNDSK+LS RR + +K+ A++WS+ Sbjct: 77 GLDEVGRGPLAGPLTVAAVVLPEAPHIAHLNDSKQLSASRREEVAAAVKDVAIAWSVQHI 136 Query: 74 EPHEIDELNILHATMLAMQRAVAGLH---IAPEYVLIDGNRCP-KLPMPAMAVVKGDSRV 129 P +ID+ + A RAVA + +A + VL+DGN P + +KGD+R+ Sbjct: 137 APEDIDDAGMSACLRRAFGRAVAAVETAGVAIDVVLLDGN--PLHFDVRERTFIKGDARL 194 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AAS++AKV RD M +P YGF ++KGY +A H+ + ++G HRRSF Sbjct: 195 ACIAAASVVAKVERDELMTQAAQTYPVYGFDRNKGYGSAEHIAAIKKYGLCPLHRRSF 252 >UniRef50_D1CBL6 Ribonuclease n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBL6_THET1 Length = 219 Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/189 (41%), Positives = 102/189 (53%), Gaps = 6/189 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAG-----LNDSKKLSEKRRLALYEEIKEKAL 66 VAG+DE GRG G V A V+L P + DSK LS RR YE IK AL Sbjct: 28 VAGLDEAGRGAWAGPVFGAVVVLPPDLSTLESLAEVVRDSKVLSPNRRELAYEAIKASAL 87 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 +G + P EID L I AT LA RA+ + P+ +LID + + +A+V GD Sbjct: 88 YIGIGASTPDEIDTLGISRATELAWLRALRDADL-PDVLLIDAFKIRACSINQVAIVDGD 146 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 + I+AAS++AKV RD MA L P + F +HKGY T H ++A +G T HRRS Sbjct: 147 ALCLSIAAASVVAKVLRDRYMADLTEYVPGFSFHKHKGYGTREHQAEIAIYGVTPQHRRS 206 Query: 187 FGPVKRALG 195 F P+ LG Sbjct: 207 FAPISTVLG 215 >UniRef50_Q13BU3 Ribonuclease HII n=19 Tax=Bacteria RepID=RNH2_RHOPS Length = 298 Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 87/179 (48%), Positives = 106/179 (59%), Gaps = 1/179 (0%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG DE GRGPL G VV AAV+LDP R GL+DSK+L+ RR L+EEI A ++ Sbjct: 87 VAGCDEAGRGPLAGPVVAAAVVLDPKRVPKGLDDSKRLTADRREELFEEICATA-QVAVA 145 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 A P I+ NIL A++ A+ RAV L P++V +DG + AVV GD + Sbjct: 146 YASPERINRDNILRASLWALTRAVHALPDLPQHVFVDGRDRLATRCESEAVVGGDGLIAS 205 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASI+AKV+RD M L P YGF HKGY HL LA G T HHRR F PV Sbjct: 206 IAAASIIAKVSRDRLMCRLAQECPGYGFESHKGYGVPEHLAALARLGPTVHHRRFFAPV 264 >UniRef50_A4S5U9 Ribonuclease (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5U9_OSTLU Length = 189 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 82/178 (46%), Positives = 112/178 (62%), Gaps = 3/178 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI-KEKALSWSL 70 V GVDE GRGPL G VV AA + + +NDSK+L+E+ R ++EE+ K + + + Sbjct: 13 VVGVDEAGRGPLAGPVVAAACFVPKDCVVDCVNDSKQLTEEGREEIFEELMANKDIEYGV 72 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSRV 129 + IDE+NIL TM AM R+ A + ++VLIDGNR PK L A A+VKGD++ Sbjct: 73 CVIDQDRIDEINILECTMEAMHRSAADVPNV-DWVLIDGNRVPKPLEGKAEAIVKGDAKN 131 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASI+AKVTRD M +D FP YGF HKGY T H+ + +HG +HR++F Sbjct: 132 VAIAAASIIAKVTRDRMMLEIDKEFPMYGFKDHKGYGTKAHMAAIDKHGPCVYHRKTF 189 >UniRef50_C5LZG5 Ribonuclease n=5 Tax=Eukaryota RepID=C5LZG5_9ALVE Length = 630 Score = 122 bits (306), Expect = 7e-27, Method: Composition-based stats. Identities = 85/197 (43%), Positives = 113/197 (57%), Gaps = 16/197 (8%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIA-GLNDSKKLS-EKRRLALYEEI-KEKALS 67 +V GVDE GRGPL G VV AAV ++ I G+ DSK +S E+ R +YE++ K + Sbjct: 9 IVIGVDEAGRGPLCGPVVAAAVYINQDTYIPYGICDSKTISNEEYRDMMYEQLTNNKGVK 68 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE------YVLIDGNRCP-------K 114 WS+G + ID +NIL AT A AV L E +VLIDGNR P Sbjct: 69 WSVGIVDNKVIDTINILQATFTAKTEAVLKLTKDGEGRKSKYHVLIDGNRVPPQLLNNNN 128 Query: 115 LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKL 174 + + +VKGDS+ I+AASI+AKVTRD M + PQY +QHKGYPT H+ L Sbjct: 129 INLQCTPIVKGDSKEYIIAAASIIAKVTRDRIMHHIHNNIPQYNVSQHKGYPTTAHIALL 188 Query: 175 AEHGATEHHRRSFGPVK 191 G +++HR +F P+K Sbjct: 189 KRLGPSKYHRLTFAPLK 205 >UniRef50_D2SE00 Ribonuclease H n=2 Tax=Actinomycetales RepID=D2SE00_9ACTO Length = 257 Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 74/178 (41%), Positives = 100/178 (56%), Gaps = 2/178 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARP--IAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAG DE GRG G +V AA +L R + GL DSK L+ R +YEE+ ++A++WS Sbjct: 43 VAGADEAGRGACAGPLVAAACVLPAGRRGRVPGLADSKLLTVAARERVYEEVVDRAVAWS 102 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + ++D + + A++RAV L +YVL DG P L P +AV KGD Sbjct: 103 VVLLPVADLDARGMHVTNIEALRRAVWALDPGADYVLTDGFPVPGLARPTLAVWKGDRIA 162 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ++AAS+LAKVTRD M L +P+Y FA HKGY TA H L +G HR+ F Sbjct: 163 ACVAAASVLAKVTRDRIMLDLHERWPEYDFAVHKGYSTAAHDAALQRYGPCPEHRKRF 220 >UniRef50_A8EVA1 Ribonuclease HII n=4 Tax=Epsilonproteobacteria RepID=RNH2_ARCB4 Length = 192 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 103/176 (58%), Gaps = 4/176 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGPL G +V A VIL I GLNDSK LSEK+R L++EIKEK+ + + Sbjct: 4 LCGIDEAGRGPLAGPLVVAGVIL--LEDIVGLNDSKVLSEKKREKLFDEIKEKS-KYHIV 60 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 ++ IDE I ++ + L L+DGN + + + K D++ + Sbjct: 61 FSDAKLIDEKGISFCLKSSILEIIENLKEFSNSFLMDGNTNFGIQILQKEI-KADAKYAQ 119 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 +SAASILAKV+RD M + ++P+Y F +HKGY T H+E + E G ++ HR +F Sbjct: 120 VSAASILAKVSRDRFMDEISPLYPKYDFHKHKGYGTKAHIEAIKEFGRSDIHRHTF 175 >UniRef50_B6BTW0 Ribonuclease n=1 Tax=beta proteobacterium KB13 RepID=B6BTW0_9PROT Length = 179 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/176 (43%), Positives = 108/176 (61%), Gaps = 2/176 (1%) Query: 14 GVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGRA 73 G+DEVGRG + G VV AAV++D + + ++DSK LS KRR +L +EIK+K + +S+ Sbjct: 4 GIDEVGRGCVAGPVVAAAVVIDESFDVL-VSDSKLLSAKRRESLDKEIKKKCVDFSISVI 62 Query: 74 EPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEIS 133 +DE+NI A++LAM++A L + DG PK+ A+A V GD EIS Sbjct: 63 NSKIVDEINIHKASLLAMEQAYINLCHQSGSIKCDGKFTPKID-GAVAHVNGDKLYTEIS 121 Query: 134 AASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 AASI+AKV RD M + + +P Y F +HKGY T HLE + ++G HR +F P Sbjct: 122 AASIIAKVYRDHLMNYISLKYPDYHFDKHKGYLTKLHLEAIEQYGPCNIHRLTFKP 177 >UniRef50_A3VNV1 Ribonuclease n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VNV1_9PROT Length = 209 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/182 (42%), Positives = 99/182 (54%), Gaps = 3/182 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIA-GLNDSKKLSEKRRLALYEEIKEKA-LSWS 69 + G+DE GRG G VV AAVI + L DSK L E RR L++ + + L Sbjct: 19 ICGIDEAGRGAWAGPVVAAAVICGDVKAYPEDLADSKTLREARREHLFDLLSARQDLRVG 78 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM-AVVKGDSR 128 +G A EID + + A LAM RAV L P L+DGN P LP P + +VKGD Sbjct: 79 VGVASVAEIDRMGVGKANWLAMARAVKALPSPPLGALVDGNYAPALPCPDIRPIVKGDGS 138 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+AASI+AKVTRD M +L P Y ++ +KGYP H L E G + HHR SF Sbjct: 139 CLVIAAASIVAKVTRDRIMRSLCPEHPAYRWSANKGYPAPVHRAALEEIGPSAHHRHSFA 198 Query: 189 PV 190 P+ Sbjct: 199 PI 200 >UniRef50_A5IZB4 Ribonuclease n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZB4_MYCAP Length = 206 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 106/187 (56%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +L+AGVDE GRG G +V A+VI+ + DSKKLS K+R L++EI + + + Sbjct: 13 KLIAGVDEAGRGCCAGPLVVASVIMPNGYINENIKDSKKLSAKQRDILFDEILKVCIDYH 72 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + +D+ N ++ M+ + L+ P+ V+ D + +L + + +VKGDS Sbjct: 73 IVTLPSSYVDKYNPKKSSKNGMKICIDSLNTKPDLVITDFEKIDELAIKQVNLVKGDSIS 132 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 ++ ASILAKVTRD M + + +Y F +HKGY T H E + ++GA+ HR ++ Sbjct: 133 FNVACASILAKVTRDRYMIKIANKYKEYEFEKHKGYCTKRHTESIIKYGASPEHRLTYKN 192 Query: 190 VKRALGL 196 V+ A+ + Sbjct: 193 VREAISI 199 >UniRef50_C7MB80 Ribonuclease n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MB80_BRAFD Length = 272 Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 107/195 (54%), Gaps = 14/195 (7%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA-----GLNDSKKLSEKRRLALYEEI 61 P +++ GVDEVGRG L G V A ++ +A G+ DSKKL+ +RR AL E I Sbjct: 20 PGRRIIVGVDEVGRGALAGPVAVGACAVEVVGGLAAPLPEGVRDSKKLTARRREALVEPI 79 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN--------RCP 113 L+ ++G A P EIDE+ I+ A A RA+ L +A + +++DG+ P Sbjct: 80 LGSVLAGAVGWASPAEIDEIGIMPALTTAALRALDLLGVAADAIVLDGDVDVLTPALTAP 139 Query: 114 KLPMPAMAV-VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLE 172 P P + + V D ++AASILAKV RDA M LD P+Y +A +KGY + H E Sbjct: 140 GRPTPLVHLQVSADRDCASVAAASILAKVARDARMVELDAEAPEYCWASNKGYGSKPHRE 199 Query: 173 KLAEHGATEHHRRSF 187 + G HHRRS+ Sbjct: 200 AIDRFGVHAHHRRSW 214 >UniRef50_C8PH70 Ribonuclease n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PH70_9PROT Length = 187 Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 70/177 (39%), Positives = 100/177 (56%), Gaps = 6/177 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRG L G + A +L R IAGL DSKKLSEKRR LY I E + + + Sbjct: 5 ICGIDEAGRGCLAGPLCVAGCVLQ--REIAGLADSKKLSEKRREELYARIIENS-RYKIV 61 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM-AVVKGDSRVP 130 ++DE + A+++ +A ++ DGN + + +VK D+++ Sbjct: 62 EISSAQVDEAGLSSCLRSALEQILAYFMGFSGQIIYDGN--ATFGVRGLQTLVKADAQIA 119 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 E+SAASILAKVTRD M L +PQYGFAQ+KGY + H+ + +G T HR S+ Sbjct: 120 EVSAASILAKVTRDRTMNELARRYPQYGFAQNKGYGSRAHIAAIERYGLTPFHRASY 176 >UniRef50_C7LXT7 Ribonuclease n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LXT7_ACIFD Length = 200 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 86/193 (44%), Positives = 105/193 (54%), Gaps = 13/193 (6%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDP-------ARPIAGLNDSKKLSEKRRLALYE 59 P + G+DEVGRG G VV A A P G+ DSK LS R A Sbjct: 5 PSGDRLVGIDEVGRGAWAGPVVVGAARGSVAAAAAILAHPRGGVRDSKALSPAAREAALG 64 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEY-VLIDGNRCPKLPMP 118 ++ L ++G A EID+L + A LA RA L A E VL+DG R P + Sbjct: 65 ALEAAGLELTVGSASAREIDKLGLTGALRLAAHRA---LGAASELEVLLDG-RVPYVEAG 120 Query: 119 AM-AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 + +V GD R P I+AASI+AKV RDA M ALD + YGFA+HKGY TA H L+EH Sbjct: 121 RVHCIVGGDRRHPLIAAASIVAKVRRDAFMVALDELAAGYGFARHKGYGTAEHRRALSEH 180 Query: 178 GATEHHRRSFGPV 190 G T HRRSFGP+ Sbjct: 181 GVTPWHRRSFGPI 193 >UniRef50_C8WAJ0 Ribonuclease n=2 Tax=Atopobium RepID=C8WAJ0_ATOPD Length = 257 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/182 (45%), Positives = 107/182 (58%), Gaps = 11/182 (6%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIA-GLNDSKKLSEKRRLALYEEIKEKALSWS 69 LV GVDEVGRG + G + AV L P PI GLNDSKKL+ +R L E+I+E A + Sbjct: 71 LVVGVDEVGRGSVAGPLTVCAVCL-PDEPIIYGLNDSKKLTATKREILAEQIQEVATAIG 129 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM----PAMAVVKG 125 + P IDE+ + AM +AV I P+ VLIDGN PM +VKG Sbjct: 130 IAHISPQRIDEVGMAQCLRDAMLQAVKNTGIEPDCVLIDGN-----PMHIHPKEKTLVKG 184 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D+R+ I+AASI+AKVTRDA M A D +P Y A+ KGY +A H++ + E G + HR Sbjct: 185 DARIASIAAASIVAKVTRDALMVAYDEEYPGYYLAECKGYASAEHIKAIGEKGLSPIHRA 244 Query: 186 SF 187 SF Sbjct: 245 SF 246 >UniRef50_C1SJ31 Ribonuclease n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ31_9BACT Length = 184 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 100/177 (56%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L+ G+DEVGRG L G VV AV+L L DSKK+SEK+R + ++ A+++ + Sbjct: 2 LIVGIDEVGRGCLAGPVVAGAVLLPENFSDERLVDSKKISEKKRKIMDGVVRANAIAFGI 61 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G +ID I+ T AM A+ + ++ + V++D + + +P K + + Sbjct: 62 GAVSNEDIDRYGIVPCTKKAMMLALEQISVSYDKVIVDAVKLEGVKVPLEHPFKAEDKFQ 121 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ++AASI+AKV RDA M L I P YG+ +KGY H+EK+ E G T HRRSF Sbjct: 122 CVAAASIIAKVYRDALMTKLHINHPDYGWYSNKGYGAKVHIEKIKEIGLTPLHRRSF 178 >UniRef50_C0A3Z9 Ribonuclease n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A3Z9_9BACT Length = 278 Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 110/217 (50%), Gaps = 38/217 (17%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDP--------ARPIAGLNDSKKLSEKRRLALYE 59 H +L+ GVDE GRG L G VV AAV++ A + +NDSK+LS R AL Sbjct: 43 HAELI-GVDEAGRGALAGPVVAAAVLVRRVFLESRWVAHNASRVNDSKQLSAPERDALAF 101 Query: 60 EIK----EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH--------IAPEY--- 104 E + E A+ G AE EI++ NIL AT LAM+RA+ +H + P+ Sbjct: 102 EFETLAVENAIRVGCGVAEVSEIEQFNILGATKLAMRRALECIHPPEAFQQQVEPDLFST 161 Query: 105 --------------VLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAAL 150 ++IDG P P + +VKGD+R I+ ASI+AKVTRD + L Sbjct: 162 EAELAAWRNRVSCRIIIDGLPLKSFPYPHLGIVKGDARSLCIAMASIIAKVTRDRLLTEL 221 Query: 151 DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 D P YGFAQHKGY T H E + G HR F Sbjct: 222 DARHPGYGFAQHKGYGTEEHREAVLRLGPCVQHRGLF 258 >UniRef50_Q3XZB5 Ribonuclease n=1 Tax=Enterococcus faecium DO RepID=Q3XZB5_ENTFC Length = 151 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 89/151 (58%), Gaps = 4/151 (2%) Query: 44 NDSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE 103 N+ ++ SE + K+K L+ +G + ID++NI A+ LAM +AV L I P Sbjct: 4 NNYQRKSEN---FFINKFKKKPLAIGIGIVDQQTIDDVNIYEASKLAMIQAVEKLSIVPS 60 Query: 104 YVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHK 163 Y+LID LP+ ++KGD+R I+AASI+AKV RD M D+++P YGF+ + Sbjct: 61 YLLIDAMTL-DLPIQQEKIIKGDARSVSIAAASIIAKVYRDQLMKEYDVLYPGYGFSHNA 119 Query: 164 GYPTAFHLEKLAEHGATEHHRRSFGPVKRAL 194 GY T HLE L G T HR+SF PVK+ L Sbjct: 120 GYGTKEHLEGLERQGITPIHRKSFAPVKKYL 150 >UniRef50_A8SLV4 Ribonuclease n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=A8SLV4_9FIRM Length = 210 Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 113/192 (58%), Gaps = 7/192 (3%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 +E +Y L+ GVDEVGRG L G VV+ A+I+ I G+ DSKKLS+K+RLALY++I Sbjct: 7 LENIYKKYNLIIGVDEVGRGCLAGPVVSCAIIMKKDSKIEGVTDSKKLSKKKRLALYDKI 66 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVA------GLHIAPEYVLIDGNRCPKL 115 E+ + + +G + +IDE+NI A+ AM+ A++ G ++ ++++ D + + Sbjct: 67 LEECVGYGIGIVDNVKIDEINIKQASRFAMKIAISNIKDLDGNKVSGDFLITDAEKVD-V 125 Query: 116 PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLA 175 +P + ++ GD +S ASI+AK RD+ + +P Y F ++ GY T H + + Sbjct: 126 DIPQINLIHGDELSYVVSCASIIAKEYRDSMFVEYEKKYPNYNFIKNVGYGTKAHYKGID 185 Query: 176 EHGATEHHRRSF 187 E G T HR +F Sbjct: 186 EFGVTPIHRVTF 197 >UniRef50_Q82KF0 Ribonuclease HII n=15 Tax=Actinomycetales RepID=RNH2_STRAW Length = 233 Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 78/179 (43%), Positives = 103/179 (57%), Gaps = 1/179 (0%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +++AGVDEVGRG G V A I RP GL DSK L+ KRR L EE+++ S++ Sbjct: 21 KVIAGVDEVGRGAWAGPVTVCAAITGLRRPPEGLTDSKLLTVKRRTVLAEELRKWVTSYA 80 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKGDSR 128 LG A P EID L + A LA RA+ L + P+ V++DG P V+KGD Sbjct: 81 LGHASPEEIDALGMTAALRLAAVRALEALPVRPDAVILDGKHDYLGSPWKVRTVIKGDQS 140 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ++AAS++AKV RD MA L I +GFA + GYP+ H LAE G T +HR S+ Sbjct: 141 CVAVAAASVIAKVQRDKMMAELGIEHADFGFAANAGYPSPVHKAALAERGPTPYHRLSW 199 >UniRef50_B3T7B1 Putative Ribonuclease HII n=1 Tax=uncultured marine microorganism HF4000_APKG3D20 RepID=B3T7B1_9ZZZZ Length = 252 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 106/213 (49%), Gaps = 37/213 (17%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPA--------RPIAGLNDSKKLSEKRRLALYEEIKE 63 + GVDE GRG L G VV A++L R +NDSK+L+E++R L++ I+ Sbjct: 19 IVGVDEAGRGCLAGPVVAGAMLLPTGFFKKASNRRRCVEVNDSKQLNEEQREKLFKTIER 78 Query: 64 ----KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE---------------- 103 L ++ G A +EI+ NI+ AT +AM+RA+ L E Sbjct: 79 LRDLGELWFTTGEATVNEIESENIVGATCIAMRRAMDALGDKCEGRWGPQDKDEAEGFFA 138 Query: 104 ---------YVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVF 154 VL+DG +LP +VKGD+ ++ ASI AKVTRD M LD + Sbjct: 139 SEIEQSERWIVLVDGKPMKRLPHAHEGLVKGDTLSLGVAMASIAAKVTRDRIMRKLDQSY 198 Query: 155 PQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 P Y FA +KGY + HL L EHG TE HR F Sbjct: 199 PAYDFASNKGYGSPNHLRGLDEHGPTEVHRPRF 231 >UniRef50_UPI000051041B ribonuclease HII n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051041B Length = 243 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 106/210 (50%), Gaps = 32/210 (15%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILD-----PARPIAGLNDSKKLSEKRRLALYEEIKEK 64 + V GVDEVGRG L G V + D A AG++DSK+LS R + + Sbjct: 21 EFVIGVDEVGRGALAGPVSVGVALFDLREVTAAEVPAGIHDSKQLSALSRQTATDRVNGW 80 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIA---------PEYVLIDGNR---- 111 A + S+G P+E+DEL + A LA +RA++ + + +L+DG Sbjct: 81 ARATSVGSTTPNELDELGMTMALNLAGRRALSEMLLECVGSTDFPPSTMILLDGKHDWLS 140 Query: 112 ------C-------PKLPMPAM-AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQY 157 C L +P + V+KGD VP I+AASI+AKV RD EM AL PQY Sbjct: 141 APLTLDCLGIFGDAADLQLPQVRTVIKGDGSVPVIAAASIVAKVQRDEEMIALAKANPQY 200 Query: 158 GFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 G+ + GY T H +A+ G + HHRRSF Sbjct: 201 GWQSNVGYGTMKHRRGIADFGPSIHHRRSF 230 >UniRef50_Q04SW6 Ribonuclease n=4 Tax=Leptospira RepID=Q04SW6_LEPBJ Length = 223 Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 105/205 (51%), Gaps = 20/205 (9%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP--------ARPIAGLNDSKKLSEKRR 54 E+ + + G+DE GRGP G + A V + + GL DSKKLSEK+R Sbjct: 13 EYRFYSESIPCGIDEAGRGPYAGPLSVALVSFSQNTLHQILEGKLLKGLTDSKKLSEKKR 72 Query: 55 LALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQR----AVAGLH-IAPEYVLIDG 109 ALY EI + A P+ ID I A + +++ A+ G+ P +LIDG Sbjct: 73 EALYPEILKIAQISCQTFLSPNYIDREGINRAVLEGIRKCAKMAIRGVSSTLPLQLLIDG 132 Query: 110 N----RCPK---LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQH 162 N R P+ + KGD R+ I+AASILAKV+RD M ++ +P Y F +H Sbjct: 133 NYNFNRYPEWNYFKNRSSFYTKGDLRIVSIAAASILAKVSRDRYMTSISKKYPDYRFDRH 192 Query: 163 KGYPTAFHLEKLAEHGATEHHRRSF 187 KGY T H E + +G ++ HRRSF Sbjct: 193 KGYGTKLHEELILRYGLSDIHRRSF 217 >UniRef50_B1ZMV3 Ribonuclease n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMV3_OPITP Length = 261 Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 105/211 (49%), Gaps = 37/211 (17%) Query: 14 GVDEVGRGPLVGAVVTAAVILDP-------ARPIAG-LNDSKKLSEKRRLALYEEIKE-- 63 GVDE GRG L G VV AV++ A AG +NDSK+L+ R L+ E +E Sbjct: 23 GVDEAGRGALAGPVVAGAVMVTKEFLEGRWAVTKAGRVNDSKQLTPAMREELWAEFEELV 82 Query: 64 --KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEY----------------- 104 + + G A+ E+++LNIL AT LAMQRA+ ++ + Sbjct: 83 NQGQIHATFGVADVAEVEQLNILGATKLAMQRALEAIYPPSAFQQKTEPDLFTSAEELAA 142 Query: 105 --------VLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQ 156 +L+DG K P P +++ GD+R I+ ASI+AKV RD M L++ P Sbjct: 143 YQPTVSCRILLDGLAMRKFPYPHHSIISGDARSLCIAMASIVAKVQRDRLMCELELKHPG 202 Query: 157 YGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 YGFAQHKGY T H E L G HR F Sbjct: 203 YGFAQHKGYGTPEHCEALLRLGRCAQHRDLF 233 >UniRef50_A4ECJ3 Ribonuclease n=3 Tax=Collinsella RepID=A4ECJ3_9ACTN Length = 262 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 72/172 (41%), Positives = 99/172 (57%), Gaps = 3/172 (1%) Query: 17 EVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEEIKEKALSWSLGRAEP 75 EVGRG + G + AV L P P + G+NDSKKL+ RR L +I E A + P Sbjct: 82 EVGRGSVAGPLTVCAVCL-PMEPRVWGINDSKKLTPARRELLSVKIAEVATAIGFCHIAP 140 Query: 76 HEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAA 135 +IDE+ + A A+ AVA + P+ VL+DGN +P VVKGD+++ I+AA Sbjct: 141 KDIDEMGMARAIRTAVAGAVADTGLEPDCVLMDGNPLGAVP-NERDVVKGDAKIACIAAA 199 Query: 136 SILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 SI+AKVTRD M D +P+Y A+ KGY + H+E + +HG HR SF Sbjct: 200 SIMAKVTRDEMMVEYDAEYPEYHLAESKGYASPEHIEAIRKHGLCPLHRVSF 251 >UniRef50_C7R325 Ribonuclease n=2 Tax=Micrococcineae RepID=C7R325_JONDD Length = 303 Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 102/208 (49%), Gaps = 34/208 (16%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPAR--PIAGLNDSKKLSEKRRLALYEEIKEKALS 67 +LVAGVDEVGRG L G V ++DP P GL DSK+LS + R L I+ A++ Sbjct: 85 RLVAGVDEVGRGALAGPVAVGVCVVDPTTQLPPVGLTDSKELSHEARALLVPMIQGWAVA 144 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVA---------------GLH------------- 99 ++G A P EIDE I+ A LA QRA+ G H Sbjct: 145 SAVGLATPEEIDECGIVGALRLAGQRALGEIMQRLGPVDTVLLDGSHNWLSEPVQDLFDA 204 Query: 100 IAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGF 159 + + IDG P++ + VK D ++ ASILAK RDA M LD FP YG+ Sbjct: 205 VTSDQQTIDGYEEPRV----VTRVKADLACASVAGASILAKEHRDAIMRELDHDFPHYGW 260 Query: 160 AQHKGYPTAFHLEKLAEHGATEHHRRSF 187 +KGY ++ H L G T HHR S+ Sbjct: 261 VTNKGYASSGHTYALTTRGPTPHHRMSW 288 >UniRef50_B9L797 Ribonuclease n=3 Tax=Epsilonproteobacteria RepID=B9L797_NAUPA Length = 196 Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 102/187 (54%), Gaps = 16/187 (8%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARP----------IAGLNDSKKLSEKRRLALYEEI 61 + G+DE GRGP+ G +V A I + + LNDSKKL+ K+R L+E I Sbjct: 5 ICGIDEAGRGPIAGPLVVAGCIFKNEKLKVKSEKWENFLQKLNDSKKLNAKKREELFEII 64 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM- 120 +E + + + IDE + A A+ L A +Y L DGN + + Sbjct: 65 QE-TCEYHIVFVDNKTIDEKGLSFAINYALNEIKKTLK-ANKY-LFDGN--SNFGVKGIE 119 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 ++KGD ++ +ISAASILAKV+RD M + +P Y F +HKGY T H+E++ ++G + Sbjct: 120 TLIKGDGKIKQISAASILAKVSRDKYMLEIADKYPMYNFKKHKGYITKEHIEEIKKNGFS 179 Query: 181 EHHRRSF 187 + HR+S+ Sbjct: 180 DIHRKSY 186 >UniRef50_B1LVZ9 Ribonuclease n=9 Tax=Alphaproteobacteria RepID=B1LVZ9_METRJ Length = 232 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/181 (45%), Positives = 104/181 (57%), Gaps = 13/181 (7%) Query: 14 GVDEVGRGPLVGAVVTAAVILDP-ARP---IAGLNDSKKLSE--KRRLALYEEIKEKALS 67 G DEVGRG L G VV AAV DP A P +A L+DSK++ E + RLA + Sbjct: 53 GCDEVGRGALCGPVVVAAVWFDPTAIPPDLLAALDDSKRVPEPVRERLAPLIRAHARVAV 112 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP-MPAMAVVKGD 126 + RA ID +NI AT+ AM RAVA L +A VL+DG LP +P AV+ GD Sbjct: 113 AAGSRAL---IDRINIRGATLDAMARAVARLGLA-APVLVDGRDA--LPGLPGRAVIGGD 166 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 VP+I+AASI+AKV RD M L P YG+ ++ GY TA H L + G + HHR S Sbjct: 167 HLVPQIAAASIVAKVLRDQLMRRLARRHPGYGWERNVGYGTAVHRAGLTQLGRSAHHRLS 226 Query: 187 F 187 F Sbjct: 227 F 227 >UniRef50_B2V752 Ribonuclease HII n=3 Tax=Sulfurihydrogenibium RepID=RNH2_SULSY Length = 197 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 96/177 (54%), Gaps = 1/177 (0%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGPL G +V A+VI + DSK LSEK R L+E+I + A ++ Sbjct: 16 IVGIDEAGRGPLAGPLVIASVIFPKHQKPFIHTDSKGLSEKEREYLFEKIHDYAEEINIT 75 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 E EID+ I +A + M+ + L + L+D + + + + ++KGD Sbjct: 76 IVENTEIDKFGISNAAKIYMENNLKSLKSKWDIALVDFVKLDE-SINHLPLIKGDEISHT 134 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+AASI+AKV RD M +P + F +HKGY T H +++ + G T HRRSF Sbjct: 135 IAAASIIAKVVRDRIMIEYKEKYPNFSFDKHKGYATKQHYQEIKKFGITPIHRRSFN 191 >UniRef50_B5Y443 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y443_PHATR Length = 194 Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 104/195 (53%), Gaps = 17/195 (8%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL-DPARP---IAGLNDSKKLSEKRRLALYEEIKEKALS 67 V G DE G G + G VVTA+ + D A I G++DSK LS K R +YE I + Sbjct: 1 VIGSDESGSGCIAGPVVTASCCVRDNAADGLWIDGVDDSKSLSTKDRERIYEAIVQNPSR 60 Query: 68 --WSLGRAEPHEIDELNILHATMLAMQRAVAGL---------HIAPEYVLIDGNRCPKLP 116 WS+ EIDE + +AT+ Q ++ + H P Y ++DG+R PK+ Sbjct: 61 YLWSIQERSAAEIDEQSATNATLNCFQDSIEDVVSQLRAEYPHCQP-YSIVDGHRSPKVD 119 Query: 117 -MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLA 175 + +GD+ V ++ ASILA+VTRD MA + +P Y F ++ GYP+ H E L Sbjct: 120 GCTSRPWKQGDAYVYTVALASILARVTRDRHMALAAVKYPLYDFDRNGGYPSRAHTEILH 179 Query: 176 EHGATEHHRRSFGPV 190 +HG + HR+S PV Sbjct: 180 QHGYSPIHRQSCKPV 194 >UniRef50_Q8EUA9 Ribonuclease n=1 Tax=Mycoplasma penetrans RepID=Q8EUA9_MYCPE Length = 218 Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 2/186 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKL-SEKRRLALYEEIKEKALSWSL 70 + G+DEVGRG + G +V VIL+P + DSK + S + R L I + ++S+ + Sbjct: 30 IIGLDEVGRGCIAGPLVVVGVILNPNFFDDRIKDSKLIKSIELRKELKNLILKNSISYQI 89 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 + +D+L A++ M + GL + L D + L P M +VKGD+ Sbjct: 90 EVVNSNIVDQLGPKQASVKGMTKIANGLINDYDLCLTDFEKIKDLEKPQMNLVKGDNTSF 149 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG-ATEHHRRSFGP 189 I+ ASI+AK TRD M LD +P Y F H+GY T HL+ + ++G E HR S+ P Sbjct: 150 TIACASIIAKSTRDDYMEELDNKYPNYLFKNHQGYLTKKHLQLIHQYGPIKEVHRFSYKP 209 Query: 190 VKRALG 195 +K L Sbjct: 210 IKLILN 215 >UniRef50_Q9ZJR1 Ribonuclease HII n=15 Tax=Helicobacteraceae RepID=RNH2_HELPJ Length = 209 Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIKEKA- 65 + G+DE GRG L G++ A V+ + + GL DSKKLS K+R L ++IK Sbjct: 6 MTLGIDEAGRGCLAGSLFVAGVVCNEKIALEFLKMGLKDSKKLSPKKRFFLEDKIKTHGE 65 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAV-AGLHIAPEYVLIDGNRCPKLPM---PAMA 121 + + + + +EID L + LA++ V G +A E + IDGN L Sbjct: 66 VGFFVVKKSANEIDHLGLGACLKLAIEEIVENGCSLANE-IKIDGNTAFGLNKRYPNIQT 124 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++KGD + +I+ AS+LAK ++D EM L +F +YG+ ++ GY T H+E + + GAT Sbjct: 125 IIKGDETIAQIAMASVLAKASKDREMLELHALFKEYGWDKNCGYGTKQHIEAINKLGATP 184 Query: 182 HHRRSFGPVKRAL 194 HR SF R L Sbjct: 185 FHRHSFTLKNRIL 197 >UniRef50_C8WGY3 Ribonuclease n=3 Tax=Coriobacteriaceae RepID=C8WGY3_EGGLE Length = 262 Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/182 (40%), Positives = 110/182 (60%), Gaps = 8/182 (4%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 ++ G+DEVGRGPL G + AV+L P+ P I GLNDSK++ + R + ++K A++W+ Sbjct: 74 VIVGLDEVGRGPLAGPLAVGAVVL-PSEPFIEGLNDSKQVKPEARERIAVQVKAVAVAWT 132 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLH---IAPEYVLIDGNRCP-KLPMPAMAVVKG 125 + E +ID + + LA +RA+ + + P+ VL+DGN P +L + VVKG Sbjct: 133 VEYVEASDIDACGMTASLALAFRRAIRRIEEAGVRPDVVLLDGN--PMRLDEREVNVVKG 190 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D + I+AASI+AKV RDA M +P+YGF KGY +A H+E + +G T HR Sbjct: 191 DGKCASIAAASIVAKVERDALMCRYAEEYPEYGFDACKGYASAAHIEAIKRYGLTPIHRA 250 Query: 186 SF 187 +F Sbjct: 251 TF 252 >UniRef50_B4U9C0 Ribonuclease n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9C0_HYDS0 Length = 213 Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 27/200 (13%) Query: 5 VYPHTQL-----VAGVDEVGRGPLVGAVVTAAVILD--------PARPIAGLNDSKKLSE 51 +Y H L +A VDE GRG L G +V A+++D I G DSKKL E Sbjct: 20 IYEHQFLKRGLTLACVDEAGRGALAGPLVVGAILVDNLDIFFEEEYTLIKG--DSKKLKE 77 Query: 52 KRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH----IAPEYVLI 107 R ++ IK K +S+G A EID+ I AT +AM+RA+ L + +++ + Sbjct: 78 ADRFWAFDTIK-KYFKYSVGIATHQEIDDFGITKATKMAMKRALEALKGFDIVLSDFINL 136 Query: 108 DGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT 167 + C + +VKGD + I AS++AK TRD M F + F +HKGY T Sbjct: 137 EDYDC-------IPIVKGDEKSFSIRLASLVAKATRDKMMIDYASSFKPFSFDKHKGYGT 189 Query: 168 AFHLEKLAEHGATEHHRRSF 187 H++++ + G + HRRSF Sbjct: 190 KEHIKEIKDFGLSSIHRRSF 209 >UniRef50_B0S8P2 Ribonuclease n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S8P2_LEPBA Length = 246 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 97/213 (45%), Gaps = 33/213 (15%) Query: 15 VDEVGRGPLVGAVVTAAVI--------LDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 DE GRG L G V V + + L DSKK+ E +R L EI + A Sbjct: 27 FDEAGRGTLAGPVSVGCVSFSSQTLEKIQSGTILKNLRDSKKIPEPKRFELRTEILQYAA 86 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRA-------VAG-LH-------------IAPEYV 105 W + ID NI A + RA V G LH +AP ++ Sbjct: 87 YWHVSFVSAKFIDRFNINQAIFYGISRALPVNPRQVTGHLHKTGIPLGTQTKETLAP-FL 145 Query: 106 LIDGNRCPKLPMP---AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQH 162 +DGN K+ P +++ KGD VP ISAASILAK RD M +D +P YGFA+H Sbjct: 146 FVDGNYKLKIHKPIEGYLSIPKGDDLVPSISAASILAKTYRDEYMEKMDAKYPGYGFAKH 205 Query: 163 KGYPTAFHLEKLAEHGATEHHRRSFGPVKRALG 195 KGY T H E L + G + HR SF R G Sbjct: 206 KGYGTEEHREALRKLGISPIHRLSFCNFLRREG 238 >UniRef50_A0JXT5 Ribonuclease HII n=4 Tax=Micrococcaceae RepID=RNH2_ARTS2 Length = 221 Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 22/206 (10%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPI--AGLNDSKKLSEKRRLALYEEI 61 F+ +L+AG+DEVGRG + G V ++D +RP+ + DSK L E R L + Sbjct: 13 FLSSGARLLAGIDEVGRGAIAGPVTVGITVVDLSRPVLLDDVRDSKLLKESDRERLEPLV 72 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRA---VAGLHIAPEYVLIDGNRC------ 112 + +++ ++G A EID L I+ A A RA + + P+ VL+DG+ Sbjct: 73 RNWSVASAVGHASAGEIDALGIIAALRTAGTRAWLQILAAGVTPDVVLLDGSHNWLSPET 132 Query: 113 -----------PKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQ 161 P P +VK D + ++AASILAKV RD M +L +P +G+ + Sbjct: 133 QASLFDDAPAGPGCDAPVHTLVKADMQCLSVAAASILAKVERDRIMRSLHGEYPAFGWDE 192 Query: 162 HKGYPTAFHLEKLAEHGATEHHRRSF 187 +KGY TA H E L G + +HR S+ Sbjct: 193 NKGYGTASHKEALRAAGPSPYHRVSW 218 >UniRef50_B1VXS2 Ribonuclease HII n=10 Tax=Actinomycetales RepID=RNH2_STRGG Length = 236 Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 99/182 (54%), Gaps = 4/182 (2%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 + VAGVDEVGRG G V A + RP GL DSK L+ +RR L ++ +++ Sbjct: 21 RTVAGVDEVGRGAWAGPVTVCAAVTGLRRPPEGLTDSKLLTPRRRAELDPVLRSWVTAYA 80 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKGDSR 128 LG A P EID+L + A LA RA+ GL + P+ V++DG +P V+KGD Sbjct: 81 LGDASPQEIDDLGMTAALRLAAVRALEGLPVRPDAVILDGKHDYLGVPWKVRTVIKGDQS 140 Query: 129 VPEISAASILAKVTRD---AEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 ++AAS++AKV RD AE+ A + F + GYP+ H L E G T HHR Sbjct: 141 CIAVAAASVIAKVHRDRMMAELGAASEDCADFDFGANAGYPSPVHRAALEERGPTAHHRL 200 Query: 186 SF 187 S+ Sbjct: 201 SW 202 >UniRef50_A7H1A3 Ribonuclease HII n=16 Tax=Campylobacter RepID=RNH2_CAMJD Length = 191 Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 98/176 (55%), Gaps = 9/176 (5%) Query: 14 GVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGRA 73 G+DE GRG L G ++ AA L+ + + GL DSKKLSEK+R LYE I + + ++ + Sbjct: 20 GIDEAGRGALAGPMMMAACKLN--KKLDGLCDSKKLSEKKREELYEIIIKNS-NYLILAF 76 Query: 74 EPHEIDELNILHATMLAMQRAVAGLHIAPEY-VLIDGNRCPKLPMPAMAV-VKGDSRVPE 131 +ID L + +T L + H E L DGN L + + +K D+ + + Sbjct: 77 SSEQIDTLGL--STCLKTGLKLIKKHFKAENNFLYDGN--TNLGINGIKTQIKADTSILQ 132 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 +SAASILAKV++D M L FP Y F ++K Y T H E +A+ G + HR+SF Sbjct: 133 VSAASILAKVSKDKVMNFLAKDFPCYEFEKNKAYGTKAHKEVIAKFGICKLHRKSF 188 >UniRef50_Q7VK86 Ribonuclease n=1 Tax=Helicobacter hepaticus RepID=Q7VK86_HELHP Length = 207 Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 39/208 (18%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIA--GLNDSKKLSEKRRLALYE---------- 59 VAG+DE GRG + G + A +I + + IA G DSKK+ K+R+ +Y Sbjct: 3 VAGIDEAGRGCICGGLFIAGIIANE-QVIAQFGAKDSKKMLPKQRVRVYNALLDSQKRGE 61 Query: 60 -----------EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLID 108 +I + LSW++ R+ E+ L+ L + ML V P ++ID Sbjct: 62 IGFYVAQIQAWDIDKYGLSWAM-RSGIEEV--LSYLGSYMLEQNILVQN---QPLDIVID 115 Query: 109 GNRCPKLPMPAM---------AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGF 159 GN +P ++KGD +P IS AS++AKV++D++M LD ++PQY Sbjct: 116 GNTTFGAHIPTFLAHKDVHLKTLIKGDELMPIISCASVVAKVSKDSQMYMLDNLYPQYLL 175 Query: 160 AQHKGYPTAFHLEKLAEHGATEHHRRSF 187 A++KGY T H +++ +G HHR+SF Sbjct: 176 AKNKGYATLEHKKQIMRYGYCPHHRKSF 203 >UniRef50_B8HA90 Ribonuclease n=2 Tax=Arthrobacter RepID=B8HA90_ARTCA Length = 260 Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 22/206 (10%) Query: 4 FVYPHTQLVAGVDEVGRGPLVG--AVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 F + +AGVDEVGRG L G +V A V L+ +P+AG+ DSK L R L + Sbjct: 38 FKAQGVRFLAGVDEVGRGALAGPVSVGIAVVDLERQKPLAGVRDSKLLRATERERLEPLV 97 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRA---VAGLHIAPEYVLIDGNRCPKLPM- 117 + +++ ++G A HEID L I+ A LA RA + + P+ VL+DG+ P Sbjct: 98 RRWSVASAVGHASAHEIDALGIIAALRLAGTRAWQDILAAGVIPDMVLLDGSHNWLSPAE 157 Query: 118 ----------------PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQ 161 P VK D + ++AAS++AKV RD M L +P +G+ Sbjct: 158 QLSLFDQEAPEAACDAPVHTKVKADMQCLSVAAASVIAKVERDRTMRELHAEYPDFGWDI 217 Query: 162 HKGYPTAFHLEKLAEHGATEHHRRSF 187 + GY T H + L G T +HR S+ Sbjct: 218 NNGYATVLHRDVLRAAGPTPYHRVSW 243 >UniRef50_B5Y8F7 Ribonuclease n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8F7_COPPD Length = 202 Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/177 (38%), Positives = 97/177 (54%), Gaps = 3/177 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 V GVDEVGRG + G ++ AV + P DSK++S +R +++ I E + + +G Sbjct: 18 VVGVDEVGRGAVAGPLLVCAVRFH-SSPEVKWRDSKQMSPLQRKSVFANIVESS-CFGIG 75 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPA-MAVVKGDSRVP 130 A P +ID I A + A+A + + V+ DG R +P +VKGD +P Sbjct: 76 LAAPWDIDRFGISFCLKQAAEEALAEIPLDDAIVVFDGKRPLTTEVPDYQCMVKGDVLLP 135 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ++AAS++AKV RD M LD + P Y F+ HKGY T HLE + G T HRRSF Sbjct: 136 SVAAASVVAKVIRDELMVCLDSLLPGYEFSAHKGYGTKTHLEAIRCFGITAQHRRSF 192 >UniRef50_C2BVF7 Ribonuclease n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BVF7_9ACTO Length = 235 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 116/208 (55%), Gaps = 34/208 (16%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILD------PARPIA---GLNDSKKLSEKRRLALYEEI 61 L+ G+DEVGRG L G V +LD P P GLNDSK+L+ +RR+AL + I Sbjct: 28 LIGGMDEVGRGALAGPVCVGVAVLDQRSLDNPDFPQGFPVGLNDSKQLTARRRVALQDPI 87 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL----HIAPEYVLIDGN------- 110 + +++G+A EIDEL I+ A LA RA+ L H+ P+ +L+DGN Sbjct: 88 QAWVRDFAIGQASNTEIDELGIMPALRLAGWRALNELDARGHL-PQRLLLDGNFDYLASP 146 Query: 111 RCPKL--------PMPAMAV---VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGF 159 R P L P ++V VKGD + I+AA++LAKV RDA M +L P YG+ Sbjct: 147 RQPDLFAEAGNLVSSPEVSVETLVKGDGKAAVIAAAAVLAKVYRDAFMRSLHD--PGYGW 204 Query: 160 AQHKGYPTAFHLEKLAEHGATEHHRRSF 187 A++ GY T H LAE GA+ HR+++ Sbjct: 205 ARNVGYGTPAHKAGLAELGASVWHRKTW 232 >UniRef50_C3XGM9 Ribonuclease n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGM9_9HELI Length = 207 Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 101/188 (53%), Gaps = 14/188 (7%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPAR----PIAGLNDSKKLSEKRRLALYEEIKEKAL 66 L+ G+DE GRG + G++ A+V+LD + DSK+L++ +R + I+E L Sbjct: 13 LICGIDEAGRGCVAGSLFIASVMLDECYFESFKKLDIRDSKQLTQTQRQERADSIQE-FL 71 Query: 67 SWSLGRAEPHEIDELNILHATM-LAMQRAVAGLHI-----APEYVLIDGNRCPKLPMPAM 120 GR + D +NI + MQ + L + + ++ DGN + + Sbjct: 72 REHGGRVKIVSFDSVNIDSKGLGQCMQMGLKELLLHAKKHQCKSIIFDGN--TNFGVQEI 129 Query: 121 -AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA 179 ++KGDS+ ISAASILAK +D+EM L ++PQY +KGY T H+E +A+HG Sbjct: 130 DTLIKGDSKHVLISAASILAKTNKDSEMLTLHDLYPQYNLKSNKGYLTKAHIESIAKHGY 189 Query: 180 TEHHRRSF 187 + HR+S+ Sbjct: 190 SPIHRKSY 197 >UniRef50_Q6KH21 Ribonuclease n=1 Tax=Mycoplasma mobile RepID=Q6KH21_MYCMO Length = 205 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/190 (35%), Positives = 93/190 (48%), Gaps = 3/190 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 Y + + DEVGRG L G +V A V L P + DSKKL+ ++R L IKE Sbjct: 17 FYNEFESIIACDEVGRGSLAGPIVVACVNLKPNFFNEKVRDSKKLNPRQREELSILIKEN 76 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL-HIAPEYVLIDGNRCPKLPMPAMAVV 123 S+ EID LN L AT A + + +L+D + + Sbjct: 77 G-SFHFCYINSKEIDLLNPLEATKKATTSCLNKFEEKGSQIILLDYLSNFSYSKKFINIK 135 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDI-VFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 KGD+ I++ASILAKV RD M L+ F Y F ++KGY T HLE + G ++ Sbjct: 136 KGDNTSFSIASASILAKVERDNFMINLNNDEFDIYDFFKNKGYGTKNHLEAIKIFGPSKI 195 Query: 183 HRRSFGPVKR 192 HR S+ P+K+ Sbjct: 196 HRLSYKPLKK 205 >UniRef50_Q5MCR3 Ribonuclease n=4 Tax=Leishmania RepID=Q5MCR3_LEIMA Length = 296 Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 87/266 (32%), Positives = 118/266 (44%), Gaps = 77/266 (28%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILD-PARPIA-GLNDSKKLSEKRRL----ALYEE 60 P + V GVDE GRG + G V AA + A P+ + DSKK+ E R A+ E Sbjct: 13 PSIRYVIGVDEAGRGCMAGPVGVAATLYRISATPVRYAVMDSKKMKESDRAETLEAMCAE 72 Query: 61 IKEKALSWSLG--------------RAEPHE-----------IDELNILHATMLAMQ--- 92 + + + +G R +P + I+E NIL+AT+ M Sbjct: 73 LSDAGVEGFVGTTVRDGACCLVRYQRRKPLQAVAAALVDVSVINERNILNATLEGMSAVC 132 Query: 93 -------RAVAGL-HIAPEY--VLIDGNRCP--------------------------KLP 116 AV+GL + P +LIDGNR P + Sbjct: 133 EAVVRSYNAVSGLGTLTPLTCAILIDGNRVPWTFLSGEERQRVCVQAVRKVEARKRIGVE 192 Query: 117 MPAM------AVVKGDSRVPEISAASILAKVTRDA-EMAALDIVFPQYGFAQHKGYPTAF 169 PA+ VVKGD+ + I+AASI+AKV RDA ++ + FPQYGF HKGY TA Sbjct: 193 YPALDGFSCTTVVKGDATLLSIAAASIVAKVARDAYAVSVMHPAFPQYGFDHHKGYCTAA 252 Query: 170 HLEKLAEHGATEHHRRSFGPVKRALG 195 H +LA G + HR + PVK LG Sbjct: 253 HKAELARWGPSRFHRLDYAPVKGTLG 278 >UniRef50_D2NTN7 Ribonuclease HII n=2 Tax=Rothia mucilaginosa RepID=D2NTN7_9MICC Length = 278 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 104/220 (47%), Gaps = 45/220 (20%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDP--ARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAG+DEVGRG + G V IL P + GL DSK LS RR ++ EI++ + + Sbjct: 43 VAGIDEVGRGSMAGPVTVGVAILTPDATLEVGGLIDSKALSPARRESMVPEIRQWC-AVA 101 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNRCPKLP---------- 116 +G EP +ID L + + LA QRA+A L + L+DG P Sbjct: 102 VGHVEPADIDRLGMTLSLRLAAQRALAELARRGYRADAALLDGKHDWFTPPQEDLFSALA 161 Query: 117 -----------------------------MPAMAVVKGDSRVPEISAASILAKVTRDAEM 147 MP V+KGD + I+AAS++AKV RD M Sbjct: 162 PDPAQAHYNALLAQAWEGAGEGGAGEPAQMPVTMVIKGDYKCASIAAASVVAKVERDELM 221 Query: 148 AALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 LD +P YG+A++KGY +A H E ++ G + HR S+ Sbjct: 222 VQLDTRYPGYGWAKNKGYGSAAHREAISVQGPSPQHRLSW 261 >UniRef50_B5JFA5 Ribonuclease n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFA5_9BACT Length = 250 Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 103/211 (48%), Gaps = 37/211 (17%) Query: 14 GVDEVGRGPLVGAVVTAAVILDPA--------RPIAGLNDSKKLSEKRRLALYEEIK--- 62 G+DE GRG L G VV AAV R + +NDSK LS +R LY +++ Sbjct: 22 GIDEAGRGALAGPVVAAAVAAKEGFYDSEWCKRNASSINDSKLLSLAQREELYAKLRWLE 81 Query: 63 -EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL----HIAPE-------------- 103 E + +G+ EI++LNIL AT AM+RAV + I+P Sbjct: 82 REGRILIGVGKGSISEIEDLNILGATQAAMKRAVEEILEQGDISPHDPDPLFDAALGGEP 141 Query: 104 -------YVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQ 156 +L+DG L AVVKGDS+ I+ ASI+AKVTRD M ALD +P Sbjct: 142 RETLSQWRLLVDGKPMKHLGFKHEAVVKGDSKSLCIAMASIIAKVTRDRIMMALDCEYPH 201 Query: 157 YGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 Y A KGY T H + ++G T+ HR F Sbjct: 202 YDLASSKGYATVLHRTAILDNGPTKIHRPLF 232 >UniRef50_UPI000197799D ribonuclease HII n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI000197799D Length = 239 Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 54/229 (23%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIA--GLNDSKKLSEKRRLALYEEIKEKALSWS 69 +AG+DE GRG + GA+ A VI IA G DSKKLS K+R +Y+ + E Sbjct: 3 LAGIDEAGRGCICGALFVAGVI-GREENIAHFGAKDSKKLSPKQRERIYQTLLESQHKGE 61 Query: 70 LG----RAEPHEIDELNILHATMLAMQRAVA------------GLHI------------- 100 +G + E EID+ + A +++ + G ++ Sbjct: 62 IGLFVAQIEAWEIDKFGLSIAMKNGIEQILCRIADFATLQNLIGQNVEQNTAKHNLLEQD 121 Query: 101 -------------APEYVLIDGNRCPKLPMP---------AMAVVKGDSRVPEISAASIL 138 A + +++DGN + +P +VK D +P +S ASI+ Sbjct: 122 VEQNPTDSTDSKNALQEIIMDGNTTFQAKIPHILTQSGVGVQTLVKADDIMPIVSCASIV 181 Query: 139 AKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 AKV++D +M LD ++PQY A++KGY T H + +A++G HHR+SF Sbjct: 182 AKVSKDRQMHELDKLYPQYFLAKNKGYGTLQHKKAIAKNGYCPHHRKSF 230 >UniRef50_A0ZZY2 Ribonuclease n=11 Tax=Bifidobacteriaceae RepID=A0ZZY2_BIFAA Length = 264 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 107/218 (49%), Gaps = 43/218 (19%) Query: 10 QLVAGVDEVGRGPLVGAV-VTAAVI----LDPARPIA---GLNDSKKLSEKRRLALYEEI 61 ++ G DEVGRG L G V V AA I L P+A G+ DSK L+E RR A++EE+ Sbjct: 47 DVIVGFDEVGRGSLAGPVMVGAAAIRTCDLSGPSPLAVPDGVADSKMLTEHRREAIFEEL 106 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN----------- 110 K SW++G A EID+ I +A +A RA L A + IDGN Sbjct: 107 KSWCASWAVGSASNTEIDDWGISYALGVAALRA---LSEAETRLGIDGNGLLDGRPVKVG 163 Query: 111 -----------------RCPKLPMPA--MAVVKGDSRVPEISAASILAKVTRDAEMAALD 151 P +P+PA VKGD ++ A+++AKVTRD M L Sbjct: 164 AILDGPNDYITKALNTFDAPDVPVPAEVSTKVKGDRYCATVATAAVIAKVTRDRLMVELG 223 Query: 152 IV--FPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + Y +A +KGY +A H + +AE G ++ HR S+ Sbjct: 224 AQPQYEPYEWAHNKGYGSAAHRDAIAEFGPSDLHRLSW 261 >UniRef50_A4J2Z7 Ribonuclease n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2Z7_DESRM Length = 355 Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 7/177 (3%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGL-NDSKKLSEKRRLALYEEIKEKALSWSLG 71 AG+DEVG + G +V A V+L I G+ DSK+++ K + I EKA W + Sbjct: 89 AGIDEVGVSSIAGPMVAAVVVLPHDHNIPGIPRDSKEMTLKSIEEISSLIFEKADFWHIA 148 Query: 72 RAEPHEIDELNI-LHATMLAMQRAVAGLHIAPEY-VLIDGNRCPKLP--MPAMAVVKGDS 127 P EID++ L L M+ A + P+ +++DG K+P AV KGDS Sbjct: 149 SISPKEIDDIGPELAREKLWMECANKVRSVFPKIRIIVDGKD--KIPGFTKQNAVSKGDS 206 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 +SAA+I+AK D EM L +PQY F+++KGYP H + +G HR Sbjct: 207 IFSGVSAAAIVAKQYCDNEMRILHNYYPQYNFSKNKGYPVYEHYVAIKNYGICPSHR 263 >UniRef50_UPI0001C31AB6 Ribonuclease H n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AB6 Length = 226 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 96/186 (51%), Gaps = 9/186 (4%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILD-------PARPIAGLNDSKKLSEKRRLALYEEIK 62 + VAG DE GRG L G +V AAV+ D R ++ LNDSK+ + +RR A+Y I Sbjct: 32 RFVAGADEAGRGCLAGPLVAAAVMFDYERITRSDLRALSALNDSKQQTAERREAIYPVIL 91 Query: 63 EKALSWS-LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 A + + R P ID + + A++ A+A + L DG R L A Sbjct: 92 RVATRVAVISRCAP-GIDRRGLHVTNLAALRDALARVACDGCICLSDGFRVADLGHDQRA 150 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 V+ GD+R I+AAS++AKVTRD M D++ P + FA H GY T H + G T Sbjct: 151 VIGGDARSASIAAASVVAKVTRDRFMHRADVLHPGWEFASHVGYATPEHRAAIERLGITP 210 Query: 182 HHRRSF 187 HR SF Sbjct: 211 LHRLSF 216 >UniRef50_Q1AW72 Ribonuclease n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW72_RUBXD Length = 204 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/179 (39%), Positives = 92/179 (51%), Gaps = 3/179 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAGVDE GRG L G +V AAVILD + GL+DSK+L+ R L E+ A + S+ Sbjct: 27 VAGVDEAGRGALAGPLVAAAVILDGG-VVEGLDDSKRLARPARERLLPEVLGSAEALSVV 85 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 IDE + A ++RAV L L DGN +L + D R Sbjct: 86 VFPAWWIDEHGLGAANREVLRRAVGRLLPRAGCCLADGNL--RLGPRIDCLPGADGRSAA 143 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ++AAS++AKV RDA M+AL P YGF ++ GY T H LA G HR S+ V Sbjct: 144 VAAASVVAKVLRDAAMSALGAAHPGYGFERNCGYGTPEHRRALARLGPCRVHRLSYAGV 202 >UniRef50_Q6AEA6 Ribonuclease n=2 Tax=Actinobacteria (class) RepID=Q6AEA6_LEIXX Length = 226 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/191 (38%), Positives = 97/191 (50%), Gaps = 13/191 (6%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 T +VA VDEVGRG L G V V++D A R GL DSK LSE R AL + +L Sbjct: 20 TSIVA-VDEVGRGALAGPVAVGMVVIDTAVKRIPLGLRDSKLLSEPAREALEPACRRWSL 78 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVA-----GLHIAPEYVLIDGNR---CPKLPMP 118 ++G A E+D I+ LA RA A G + +++DGN L P Sbjct: 79 FHAVGLASADEVDRHGIMRCLGLAGARAFAVLEEQGAPVHDSALILDGNYDYLTLALTRP 138 Query: 119 AMAV--VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 A V VK D ++AAS++AKV RD M D P YG+A +KGY T H +AE Sbjct: 139 ARVVTRVKADRDCASVAAASVIAKVHRDRLMIEHDADDPGYGWASNKGYSTPGHFAAIAE 198 Query: 177 HGATEHHRRSF 187 G + HR ++ Sbjct: 199 LGPSAIHRLTW 209 >UniRef50_C8PNM3 Ribonuclease n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PNM3_9SPIO Length = 165 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 72/158 (45%), Gaps = 16/158 (10%) Query: 46 SKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE-- 103 KKLS KRR I E AL W + P ID++NIL AT+ AM+ A L Sbjct: 3 QKKLSPKRRETARAAILEGALYWHIASMPPDLIDKINILQATLAAMKEAFDRLFARYRRD 62 Query: 104 ------------YVLIDGNRCPKL--PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAA 149 V++DGN+ P + A K D R P + AASILAK RD M Sbjct: 63 SIGKTADIEKSLTVIVDGNQLPDIHGDFNLTAEPKADGRYPCVMAASILAKTERDRCMME 122 Query: 150 LDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 +P Y + HKGY T H + +GA+ R SF Sbjct: 123 YHKQYPLYRYDLHKGYGTKLHRSLIEVYGASPIQRHSF 160 >UniRef50_B8DRI2 Ribonuclease n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRI2_DESVM Length = 292 Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 40/67 (59%), Positives = 45/67 (67%) Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 AVV GD+ VP +SAASILAK RD M ALD FP YG A HKGY TA H+ +AEHG Sbjct: 211 AVVGGDALVPAVSAASILAKTFRDQLMTALDRRFPHYGLAVHKGYGTAEHMAAIAEHGPC 270 Query: 181 EHHRRSF 187 HR +F Sbjct: 271 PQHRATF 277 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 11/100 (11%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDP----------ARPIAGLNDSKKLSEKRRL 55 +P T V G+DE GRG L G VV AAVIL P +AGL DSKKL+ +R Sbjct: 13 HPSTPYV-GIDEAGRGCLAGPVVAAAVILPPHADAATLADLLPDLAGLTDSKKLTAAKRE 71 Query: 56 ALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAV 95 AL I++ A++W LG P +I+ +NIL AT AM RAV Sbjct: 72 ALAPRIRQHAVAWGLGVVWPRDIERINILQATFHAMWRAV 111 >UniRef50_A9U7G7 Ribonuclease (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U7G7_PHYPA Length = 240 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 2/98 (2%) Query: 91 MQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAAL 150 M++AV L + P ++L+D L P A++ GD+ I AASILAKVTRD + Sbjct: 1 MKQAVESLGVRPCHLLVDAETV-DLDFPQTAIIHGDAVSQSIGAASILAKVTRDRLCKEI 59 Query: 151 -DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 D+ +P YG A HKGY T H L EHG + HRRSF Sbjct: 60 WDLHYPAYGIAVHKGYATRHHRSMLIEHGPSPLHRRSF 97 >UniRef50_C1RMG0 Ribonuclease n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RMG0_9CELL Length = 279 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 101/204 (49%), Gaps = 26/204 (12%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIA--GLNDSKKLSEKRRLALYEEIKEKALS 67 + VAG+DEVGRG L G V V++D A G+ DSK L+ R AL + ++ Sbjct: 44 RYVAGMDEVGRGSLAGPVSVGVVVVDVGTRSAPRGVADSKLLTPAARAALLPSLGRWGVA 103 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYV---LIDGNR------------- 111 ++G A P EID+ I+ A LA RA+ + E V ++DG+ Sbjct: 104 RAVGHASPTEIDDRGIVAALRLAGTRALRSVLEVVEQVDAVVLDGSHDWLTPPEPDLFGT 163 Query: 112 -------CPKLPMPAMAV-VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHK 163 P L +PA+ + VK D ++AAS+LAK RDA M P+Y + ++K Sbjct: 164 QSELFAPSPDLRVPAVHLRVKADRSCATVAAASVLAKCERDALMVQHAAAHPEYRWDENK 223 Query: 164 GYPTAFHLEKLAEHGATEHHRRSF 187 GY + H+ L E G T HRRS+ Sbjct: 224 GYASPEHVAALRELGPTPLHRRSW 247 >UniRef50_C5BWW5 Ribonuclease n=7 Tax=Actinomycetales RepID=C5BWW5_BEUC1 Length = 273 Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 97/201 (48%), Gaps = 24/201 (11%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 LVAG+DEVGRG L G V V++ PA R AGL DSK L+ R L ++ A + Sbjct: 34 LVAGMDEVGRGCLAGPVSVGVVVVGPATGRTPAGLRDSKLLTPAARERLVPPVRRWAFAS 93 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNR---CPKLP------ 116 ++ A EIDE+ I+ A LA RA+ L + P +++DG+ P P Sbjct: 94 AVAHASAAEIDEIGIIAALRLAGHRALGSLAADGVVPGALILDGSHDWLTPPQPDLFEAL 153 Query: 117 ----------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP 166 P VK D ++AAS+LAK RD M L P + +A +KGY Sbjct: 154 EPPVAPTAFVPPVRMRVKADLTCSVVAAASVLAKCERDGLMRVLHDDHPDFDWASNKGYA 213 Query: 167 TAFHLEKLAEHGATEHHRRSF 187 HL L E G T HRRS+ Sbjct: 214 APEHLAALRELGPTVLHRRSW 234 >UniRef50_B6YVT5 Ribonuclease HII n=10 Tax=Euryarchaeota RepID=RNH2_THEON Length = 227 Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 28/201 (13%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 +AG+DE GRGP++G +V AAV++D P G+ DSKKL+ KRR L++EI + Sbjct: 3 LAGIDEAGRGPVLGPMVIAAVVVDEGNVPKLEELGVKDSKKLTPKRRERLFDEIVQLLDD 62 Query: 68 WSLGRAEPHEID--ELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP----------KL 115 + + P EID E + + +A+ L + P+ V ID KL Sbjct: 63 YVILELWPEEIDSREGTLNEFEVENFVKALNSLKVKPDVVYIDAADVKEARFGEEIKAKL 122 Query: 116 PMPA--MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEK 173 A +A K D + +SAASILAKV RD A++ + QYG GYP+ Sbjct: 123 DFEADIIAEHKADDKFVPVSAASILAKVARD---RAIEKLKDQYG-EIGSGYPSDPRTRT 178 Query: 174 LAEHGATEHHRR--SFGPVKR 192 E E++R+ F P+ R Sbjct: 179 FLE----EYYRKHGEFPPIVR 195 >UniRef50_Q9YET5 Ribonuclease HII n=1 Tax=Aeropyrum pernix RepID=RNH2_AERPE Length = 225 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 86/176 (48%), Gaps = 24/176 (13%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPAR----PIAGLNDSKKLSEKRRLALYEEIKEKAL 66 +V GVDE GRG LVG +V A ++ AR G+ DSK+LS R+ LY EI Sbjct: 3 IVVGVDEAGRGSLVGDLVVAGFAVEEARLGELQSLGVRDSKQLSPAARVELYREISGVGF 62 Query: 67 SWSLGRAEPHEID--ELNIL--HATMLAMQRAVAGLHIAPEYVLIDG-----------NR 111 +++ P EID +NIL A + R V+ L + P V++D R Sbjct: 63 -FTVEAIRPWEIDGENINILVTKAVEEIVSRIVSYLGVHPSLVVVDKYGDVQGLRLALTR 121 Query: 112 CPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT 167 P + K DSR P +SAASI+AKV RDA + L ++ G GYP+ Sbjct: 122 LGIEPRSILVEEKADSRYPVVSAASIVAKVVRDARLQVLRRMYGVRG----SGYPS 173 >UniRef50_Q4JA60 Ribonuclease HII n=12 Tax=Sulfolobaceae RepID=RNH2_SULAC Length = 212 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 29/175 (16%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPA----RPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 ++ G+DE GRG L+G +V A V +D G+ DSKKL+ K+R L+ I E + Sbjct: 2 ILVGIDEAGRGSLIGPMVVAGVAIDSNFLKFLSEIGVKDSKKLTRKKREYLFGVILEYSY 61 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHI---------------APEYVLIDGNR 111 + SL +A P EID N+ T AM + + + + A E +I+ N Sbjct: 62 AISLVKAYPEEIDSENLNEITYRAMIQIIHSMSVYNPSIVTVDKVGNASAVEREIININS 121 Query: 112 CPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP 166 P++ A D + E+SAASI+AKV RD + L + +G GYP Sbjct: 122 SPRVENNA------DVKYVEVSAASIIAKVVRDNIINELKKTYGDFG----SGYP 166 >UniRef50_C7GZF7 Ribonuclease n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZF7_9FIRM Length = 283 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 60/90 (66%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 Y ++ AG+DEVGRGP+ G VV+A V + I G++DSKK+++ R+ L+++I E A Sbjct: 25 YIGGKIPAGMDEVGRGPIAGPVVSACVCMKADSEILGIDDSKKVTKAGRIKLFDKIIEDA 84 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAV 95 + +G + ID +NIL+AT LAM+ A+ Sbjct: 85 RAIGIGIVPHNIIDRINILNATKLAMRAAL 114 Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 50/83 (60%) Query: 105 VLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKG 164 +L+D + + P ++++GD + I+A+SI+AKV RD M D ++P Y F +KG Sbjct: 199 LLVDAVKLDDVGTPVHSIIRGDEKSYSIAASSIVAKVIRDEMMKKADEMYPGYDFKSNKG 258 Query: 165 YPTAFHLEKLAEHGATEHHRRSF 187 Y T H E + +G ++ HR++F Sbjct: 259 YGTKRHYEGIKLYGISDIHRKTF 281 >UniRef50_B8C6T8 Ribonuclease n=1 Tax=Thalassiosira pseudonana RepID=B8C6T8_THAPS Length = 341 Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 36/188 (19%) Query: 40 IAGLNDSKKLSEKRRLALYEEI--KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVA- 96 +A +NDSK L+ ++R+ +Y I + S+ + P EID++N+ AT LA ++ Sbjct: 152 MAIVNDSKTLTPQQRIDVYNVICAHPDVFAVSVAQRSPQEIDDINLTRATQLAFAESIES 211 Query: 97 -----GLHIAPEYVLIDGNRCPKL-----------------------PMPAMAVVK---- 124 L Y ++DG PKL P V+ Sbjct: 212 LVENYNLPFDKIYAIVDGKVSPKLYALQSSDTESSMQQQQSTQQSQQAAPKRFSVRPYTN 271 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA-TEHH 183 GD+ V ++ +SI+A+V+RDA +A L +P YGF ++ GY + H+E + GA T H Sbjct: 272 GDANVFTVALSSIVARVSRDAIIAELHDQYPSYGFDENLGYGSREHVEAVHRLGALTGVH 331 Query: 184 RRSFGPVK 191 R SF VK Sbjct: 332 RLSFKQVK 339 >UniRef50_C4VBD8 Ribonuclease n=1 Tax=Nosema ceranae BRL01 RepID=C4VBD8_NOSCE Length = 235 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 28/207 (13%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +++ GVDE GRGP++G +V ++ + L DSK L+EK R ++ +K+ +++ Sbjct: 17 RVIVGVDEAGRGPVIGYMVYCVMVFEVDNVPKNLKDSKMLTEKMRNDIFVTLKDYNYAYT 76 Query: 70 ------LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDG-NRCPKL------- 115 + ++ +I T+L + + V + E + ID C KL Sbjct: 77 ALHPSYITTKMLSNVNLNDISWNTVLNLLKLVCNAYTNIEGIFIDAIGTCDKLKEFLELN 136 Query: 116 -PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP----TAFH 170 K DS+ P +S ASI+AKVTRD ++ +I F GYP T Sbjct: 137 IKHKCTVESKADSKYPVVSGASIVAKVTRDDLLSKFNISFGS-------GYPSDPVTKKW 189 Query: 171 LEKLAEH--GATEHHRRSFGPVKRALG 195 L K + G + R ++ K LG Sbjct: 190 LTKEVNYIFGWGKSVRYTWNTAKNILG 216 >UniRef50_Q4CU74 Ribonuclease n=10 Tax=Trypanosomatidae RepID=Q4CU74_TRYCR Length = 479 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 10/105 (9%) Query: 100 IAPEYVLIDGNRCPKLPMPAMA----------VVKGDSRVPEISAASILAKVTRDAEMAA 149 + P +L+DG+ P+ + +++GD R I+AAS LAKV RD M Sbjct: 360 VQPPLILVDGHAAPEETISFFTEIQTGGCVQPIIEGDKRSLTIAAASCLAKVARDEIMNY 419 Query: 150 LDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRAL 194 + ++P+Y FA++KGYP +H+ + +G + HR+S+ P A+ Sbjct: 420 VSTLYPKYQFAENKGYPVEYHMRAVQRYGVSSIHRKSYKPCATAI 464 Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 13/66 (19%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDP-------------ARPIAGLNDSKKLSEKRRL 55 T L G DE GRGPL G VV AAV P AR + DSK LSE +R Sbjct: 130 TYLTIGCDEAGRGPLAGPVVGAAVCRIPLSSFNNELCAVYDAREEFQIFDSKSLSEGQRN 189 Query: 56 ALYEEI 61 +++ I Sbjct: 190 VVFQNI 195 >UniRef50_Q0W5R8 Ribonuclease HII n=2 Tax=Euryarchaeota RepID=RNH2_UNCMA Length = 224 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 20/157 (12%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKE 63 T + G+DE GRGP++G +V +I++ PA GL DSKKLS K+R +K Sbjct: 5 RTSTIMGIDEAGRGPVIGPLVVCGIIVEEKDLPAIEAMGLKDSKKLSAKKREEFAAALKN 64 Query: 64 KALSWSLGRAEPHEID------------ELNILHATMLAMQRAVAGL---HIAPEYVLID 108 K + L P EID E+N + + + +A L + E I+ Sbjct: 65 K-YKYELSVLPPQEIDARFESEDNLNRLEVNCFAGLIRSAKPTIAYLDACDVNAERFGIN 123 Query: 109 GNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDA 145 +C + ++ + DS+ P +SAASI+AKV RD+ Sbjct: 124 IKKCLDFELEIVSAHEADSKYPIVSAASIIAKVHRDS 160 >UniRef50_A2BL34 Ribonuclease HII n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=RNH2_HYPBU Length = 240 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 27/202 (13%) Query: 14 GVDEVGRGPLVGAVVTAAVIL---DPARPIA-GLNDSKKLSEKRRLALYEEIKEKALSWS 69 G+DE GRGP++G +V V + D + +A G+ DSK+L+ R LY EI AL Sbjct: 11 GIDEAGRGPVIGPMVVVGVAVCSNDIDKLVALGVRDSKQLTPVVRAKLYGEILRVALHSV 70 Query: 70 LGRAEPHEIDELNILH---ATMLAMQRAVAGLHIAPEYVLIDGNRCP---------KLPM 117 + + P +D +N+ T + +AG+H +PE V +D P +L + Sbjct: 71 IVKLPPALLDAVNLNQLEVETFEYIASRIAGVHDSPEAVYVDAVGSPEKLAARLSGRLGV 130 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT-----AFHLE 172 +A D P +SAASI+AKV RDAE+ L ++ G GYPT A+ E Sbjct: 131 RVIAEPGADKTYPIVSAASIVAKVVRDAEIRMLRRLYGVRG----SGYPTDPETIAWLAE 186 Query: 173 KLAEHGATEHH--RRSFGPVKR 192 + + A RR++ +KR Sbjct: 187 EYRRNPANPPWFVRRTWSTLKR 208 >UniRef50_D2RFM0 Ribonuclease HII n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RFM0_ARCPR Length = 211 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 39/206 (18%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPAR----PIAGLNDSKKLSEKRRLALYEEIKEKAL 66 ++AG+DE G+GP++G +V V+ D G+ DSKKL ++R LY IK Sbjct: 1 MIAGIDEAGKGPVIGPLVICGVLCDEETVEYLKSVGVKDSKKLDRRKREELYNIIK---- 56 Query: 67 SWSLGRAEPHEI--DELNILHATML---AMQRAVAGL--HIAPEYVLIDGNRCPKLP--- 116 SL + + +I ++LN L M ++RA + + P+ V ID CP + Sbjct: 57 --SLCKVKVLKISVEDLNRLMEYMSINEILKRAYVEIIRSLMPKVVYID---CPDINVER 111 Query: 117 ----------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP 166 + A K D P +S ASI+AKV RD E+ L ++ +G GYP Sbjct: 112 FKHEIEERTGVEVFASHKADEIYPIVSIASIVAKVERDFEIDKLKKIYGDFG----SGYP 167 Query: 167 TAFHLEKLAEHGATEHHRRSFGPVKR 192 + + EH +SF P+ R Sbjct: 168 SDLRTIEFLRSYLREH--KSFPPIVR 191 >UniRef50_B7GN37 Ribonuclease n=5 Tax=Bifidobacterium longum RepID=B7GN37_BIFLI Length = 279 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 81/259 (31%) Query: 10 QLVAGVDEVGRGPLVGAVV--TAAVILDPARPIAG-----------------LNDSKKLS 50 L+ G DEVGRG L G V+ AA+ P+ G + DSK L+ Sbjct: 18 DLITGFDEVGRGALAGPVMVGCAAIWARDLEPLDGDDAVELSGRTYLGVPDGVADSKMLT 77 Query: 51 EKRRLALYEEIKEKALSWSLGRAEPHEIDELNI--------------------------L 84 E RR A+++E+++ ++++G+A EIDE I L Sbjct: 78 EHRREAIFDELRDWCAAYAVGQASNTEIDEWGITYALGVAALRALSQVERELGLRLGGRL 137 Query: 85 HATMLAMQRA----------------------------VAGLHIAP-EYVL--IDGNRCP 113 A +M+ A VAG+ P +Y+ ++ P Sbjct: 138 AARKASMESAGEIVEGHPGDSVGESIGNCRESVRALPKVAGILDGPSDYITKALNTFDAP 197 Query: 114 KLPMPA--MAVVKGDSRVPEISAASILAKVTRD---AEMAALDIVFPQYGFAQHKGYPTA 168 +P+PA VKGD ++ A+++AKVTRD ++A + + Y +A +KGY +A Sbjct: 198 DVPIPADITTKVKGDQHCATVATAAVIAKVTRDRLMVDLAQSNPCYAAYEWAHNKGYGSA 257 Query: 169 FHLEKLAEHGATEHHRRSF 187 H +AEHG T HR S+ Sbjct: 258 AHRTAIAEHGPTPLHRVSW 276 >UniRef50_D0YUF0 Ribonuclease n=2 Tax=Mobiluncus mulieris RepID=D0YUF0_9ACTO Length = 278 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 9/108 (8%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAG----LNDSKKLSEKRRLALYEEIKEKAL 66 LV G+DEVGRG L G V ++ AG LNDSK L+ +RR AL + I+ Sbjct: 36 LVGGMDEVGRGALAGPVCIGVTVVSATELAAGFPPGLNDSKALTARRREALVQPIQSWVK 95 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGL----HIAPEYVLIDGN 110 +++G A EIDE+ I+ A LA RA+ L H+ P+ +L+DGN Sbjct: 96 DFAIGEATNMEIDEMGIMAAMRLAGWRALNQLDARGHL-PQKLLLDGN 142 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 5/75 (6%) Query: 116 PMPAMAV---VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLE 172 P P + V VK D ++ A++LAKV RDA M+ L+ P YG++ + GY T H E Sbjct: 203 PAPLLKVQTLVKADQHAATVAGAAVLAKVYRDAFMSRLED--PGYGWSHNVGYGTKAHRE 260 Query: 173 KLAEHGATEHHRRSF 187 ++ G + HR ++ Sbjct: 261 AISRLGPSRWHRHTW 275 >UniRef50_B1L3S7 Ribonuclease n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3S7_KORCO Length = 217 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 87/176 (49%), Gaps = 30/176 (17%) Query: 14 GVDEVGRGPLVGAVVTAAVILD--PARPIA--GLNDSKKLSEKRRLALYEEIKEKALSWS 69 G+DE GRGP++G +V AAVIL A+ + G+ DSK LS +RR L+ I E A S+ Sbjct: 2 GIDEAGRGPVIGPMVVAAVILKRREAKRLKEMGVTDSKLLSAERREELFPMIIESAESYL 61 Query: 70 LGRAEPHEIDE------LNILHATMLAMQRAVAGLHIAPEYVLIDG--NRCPKL------ 115 + EP IDE LN+L A + M + L P V++D C K Sbjct: 62 IKVIEPKRIDEAVSKNMLNLLEAEV--MSELIRELR--PARVIVDSPMRNCRKFSDVLRE 117 Query: 116 -----PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP 166 + +A K DS+ ++++ASI+AKV RD + L + G GYP Sbjct: 118 FLGDSSVKIIAENKADSKYIQVASASIIAKVERDRRIRELSEL---TGVEIGSGYP 170 >UniRef50_A7I9P7 Ribonuclease HII n=4 Tax=Methanomicrobiales RepID=RNH2_METB6 Length = 213 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 82/175 (46%), Gaps = 25/175 (14%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAG--LNDSKKLSEKRRLALYEEIKEKALSW 68 ++ GVDE G+G ++G +V A V + I G L DSK+LS R L+ IK+K Sbjct: 1 MICGVDEAGKGSVLGPMVIAGVGVGSTEMIDGFGLRDSKQLSPSERERLFVLIKKKCKVA 60 Query: 69 SLGRAEPHEIDEL--NILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG- 125 ++ EID + T +A AV +APE +D C P V+G Sbjct: 61 TV-VISAAEIDAFRREMTLNTCVARAHAVVIAQLAPEIAYVDA--CDVNPFRYAETVRGY 117 Query: 126 -------------DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT 167 DS P +SAASI+AKVTRD E+A L + Q G GYP+ Sbjct: 118 LSSPCEIVSEHHADSTYPVVSAASIVAKVTRDREIAKLAKKYGQIG----SGYPS 168 >UniRef50_A0RV25 Ribonuclease HII n=2 Tax=Thaumarchaeota RepID=RNH2_CENSY Length = 205 Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 28/162 (17%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPAR----PIAGLNDSKKLSEKRRLALYEEIKEKAL 66 LV GVDE GRG LVG +V A V + R G+ DSKKL+ K R +LY EI A Sbjct: 2 LVCGVDEAGRGSLVGPLVIAGVAIKRNRMRELKSMGVRDSKKLTRKARESLYPEIVNMAD 61 Query: 67 SWSLGRAEPHEIDE------LNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP---- 116 S+ + R P +D LN L A +A R + L YV + C P Sbjct: 62 SYHISRVPPGVVDRSVGRHMLNDLEARYMA--RVITRLGHGTTYV----DSCDVNPRRFG 115 Query: 117 -----MPAMAVV---KGDSRVPEISAASILAKVTRDAEMAAL 150 M V + D R +SAASILAKV RD + L Sbjct: 116 GRVSEMSGRTVRSYHRADDRFVIVSAASILAKVARDRSIERL 157 >UniRef50_B8DVT3 Ribonuclease n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DVT3_BIFA0 Length = 258 Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 74/239 (30%), Positives = 107/239 (44%), Gaps = 61/239 (25%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVI-----LDPARPI--AGLNDSKKLSEKRRLALYEEIK 62 ++ G DEVGRG L G V+ A LD A+ L DSK L+E RR +LYE ++ Sbjct: 17 DVIVGFDEVGRGSLAGPVMVGAAAFLARNLDEAQTAMPQYLADSKTLTEHRRESLYEPLQ 76 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIA-----PEYVLIDG--NRC--- 112 +++G A EID I HA +A RA+ G+ A P I G RC Sbjct: 77 AWVDGFAIGSASNAEIDAWGISHALGIAALRALDGVERALGMGSPGDSEIRGFDERCKYS 136 Query: 113 ---------------------------------------PKLPMPAM--AVVKGDSRVPE 131 P +PMPA +VK D++ Sbjct: 137 GTWAYTKHSPQQHADGLHVGAILDGPNDYISKALGTFEAPAVPMPAQVRTLVKADAQCAS 196 Query: 132 ISAASILAKVTRDAEMAAL---DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ++AA++LAKVTRD M L + +YG+ ++KGY + H E +A+ G ++ HR S+ Sbjct: 197 VAAAAVLAKVTRDRLMEQLARDHAEYARYGWERNKGYGSKAHREAIAQCGPSDLHRVSW 255 >UniRef50_UPI000038E392 ribonuclease HII n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E392 Length = 205 Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 26/172 (15%) Query: 13 AGVDEVGRGPLVGAVVTAAVILD-PARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 G+DE GRGPL+G +V A + D + I G+ DSKKLS RR +L+ ++ ++ + Sbjct: 4 CGIDEAGRGPLIGPMVMAILCGDRESLEIIGVADSKKLSPGRRESLFARLQSYKYNFVI- 62 Query: 72 RAEPHEID------ELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV-- 123 P EID +LN+L T + +A A V +D +L + ++ + Sbjct: 63 -ISPSEIDRYVEHQKLNVLEETYAS---KLASWAPASSTVYVDSFDVNELRLQSLLMENT 118 Query: 124 --------KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT 167 K D P +SAASI+AKV RD E+ L + +G GYP+ Sbjct: 119 KRQIVCRHKADEIYPCVSAASIIAKVIRDREIDKLHKDYGDFG----SGYPS 166 >UniRef50_B3T5F3 Putative uncharacterized protein family UPF0102 n=1 Tax=uncultured marine microorganism HF4000_ANIW141I9 RepID=B3T5F3_9ZZZZ Length = 172 Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 26/48 (54%), Positives = 38/48 (79%) Query: 147 MAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRAL 194 M D++FP+YGFA+HKGY T+FH+E+L ++ A+ HR+SF PVK+ L Sbjct: 1 MEQYDVIFPEYGFAKHKGYGTSFHMEQLNKNKASLIHRKSFKPVKKNL 48 >UniRef50_Q468N6 Ribonuclease HII n=4 Tax=Methanosarcinaceae RepID=RNH2_METBF Length = 224 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 32/199 (16%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPAR----PIAGLNDSKKLSEKRRLALYEEIKEKAL 66 ++AG+DE G+GP++G + V ++ +R + G+ DSKKL+ K+R L +IK+ A Sbjct: 2 MIAGIDEAGKGPVIGPMCIGGVKIEESRAHILKVLGVADSKKLTPKKREQLAAQIKKHAD 61 Query: 67 SWSLGRAEPHEIDEL-----------------------NILHATMLAMQRAVAGLHIAPE 103 + + P +IDEL ++L+A + +I + Sbjct: 62 GFFVLEVSPSQIDELRKIMTMNEIMVVCFSKVLEQLKPDLLYADAADVNAERFATNIRKQ 121 Query: 104 YVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHK 163 Y + + ++ + +M + D+ P +SAASI+AKV RD + L ++G Sbjct: 122 YSKTNPDHAKEIEIISMH--QADATYPVVSAASIIAKVRRDELIEELK---KEWGLDFGS 176 Query: 164 GYPTAFHLEKLAEHGATEH 182 GYP+ ++ + EH Sbjct: 177 GYPSDPKTKEFLLNWGKEH 195 >UniRef50_UPI00006CE52A ribonuclease HII family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CE52A Length = 284 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 82/194 (42%), Gaps = 44/194 (22%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL----DPARPIAGLNDSKKLSEKRRLALY---EEIKEK 64 V G+DE GRGP++G +V + +P + G NDSK+L+E++R LY EE+K Sbjct: 14 VMGIDEAGRGPVLGPMVYGCCVWPIQYEPELKLEGFNDSKQLTEQKRDQLYARMEELKND 73 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQR-AVAGLHIAPEYVLIDG-------------- 109 L + + I L MLA R ++ L Y LID Sbjct: 74 KLYFEV------RILSAEFLSNRMLAKNRDSLNELSFNAAYSLIDSVMSQGFNVTQVFLD 127 Query: 110 ------------NRCPKLPMPAMAVV---KGDSRVPEISAASILAKVTRDAEMAALDIVF 154 + K P + K D++ P + AASI AKVTRD ++ D+ Sbjct: 128 TVGKEETYQAKLYQDYKYTYPQLKFTVSSKADAKFPVVGAASICAKVTRDLQITNNDMRE 187 Query: 155 P-QYGFAQHKGYPT 167 P A GYP+ Sbjct: 188 PLDLSKATGSGYPS 201 >UniRef50_A4WHQ7 Ribonuclease HII n=4 Tax=Pyrobaculum RepID=RNH2_PYRAR Length = 198 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 18/188 (9%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDP-ARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 T V G+DE GRGP+VG +V A V+ D A G+ DSK LS + R LY +I E A+ Sbjct: 2 TLSVGGIDEAGRGPVVGPLVLAIVVGDSEALSKIGVRDSKSLSPRAREVLYGKILEMAVC 61 Query: 68 WSLGRAEPHEIDELNILHATM--LAMQRAVAGLHIAP-EYVLID---------GNRCPKL 115 + EP+EID L++ + L M+ A + + P + +D G+ L Sbjct: 62 VNYAVVEPYEID-LHVSRGMLNALEMKYAAKLMELCPADLYYVDSPDVKAARFGDGLSFL 120 Query: 116 PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLA 175 + + VP+++AASI+AKV RD + L +G GYP+ + Sbjct: 121 TGRRVVSLHKGEAVPQVAAASIVAKVVRDRLVEMLRKEVGDFG----SGYPSDRKTREWL 176 Query: 176 EHGATEHH 183 G H Sbjct: 177 RGGRIPHE 184 >UniRef50_B9LQC3 Ribonuclease n=4 Tax=Halobacteriaceae RepID=B9LQC3_HALLT Length = 234 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 39/190 (20%) Query: 14 GVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK-EKALSWSLGR 72 GVDE G+GP++G +V AAV+ DP A ++DSK+++ RR ++ EI+ A++ + Sbjct: 4 GVDEAGKGPVLGPMVAAAVLADPVALPADVDDSKRIAPSRRESIDAEIRATDAVAVGVAF 63 Query: 73 AEPHEID----ELNILHATMLAMQRAV-AGLH-------IAPEYVLIDGNRCPKL----- 115 EP EID ++N L T+ RAV A LH P V+ D + Sbjct: 64 VEPAEIDRPDTDMNTL--TVRGQARAVRAALHGVVAVDLDEPIRVVADAGDTSEARFARR 121 Query: 116 -----------------PMPAMAVVKG-DSRVPEISAASILAKVTRDAEMAALDIVFPQY 157 P ++ G D P + AAS++AKV RD MA +D +P Y Sbjct: 122 LGESVADPDSDTTDTEHPEVDVSAAHGADEDDPMVGAASVVAKVARDERMADIDADYPAY 181 Query: 158 GFAQHKGYPT 167 GYP+ Sbjct: 182 D-GLGSGYPS 190 >UniRef50_A1RYM0 Ribonuclease HII n=1 Tax=Thermofilum pendens Hrk 5 RepID=RNH2_THEPD Length = 213 Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 37/200 (18%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 VAG+DE GRGP++G +V A V+ P G+ DSK LS +RRL L I S Sbjct: 4 VAGIDEAGRGPMLGPMVVAIVVCPEEKVPLLRNMGVRDSKALSPRRRLLLSRAIPSVGCS 63 Query: 68 WSLGRAEPHEID---------ELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP 118 + EP EID LN L A + A E V +D P+P Sbjct: 64 VKVRVVEPQEIDCAVRGECYENLNHLEAAVFAQLINEVLSEGELEVVYMDSPD----PVP 119 Query: 119 A------MAVVKG----------DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQH 162 + A++KG D + + AASI+AK TRD + AL + +G Sbjct: 120 SRFEERVRALLKGQVRIVAENGADEKYTIVGAASIVAKETRDEIINALKKTYGDFG---- 175 Query: 163 KGYPTAFHLEKLAEHGATEH 182 GYP+ + AE +H Sbjct: 176 SGYPSDPRTLRFAEEWVRKH 195 >UniRef50_Q97CG6 Ribonuclease HII n=3 Tax=Thermoplasma RepID=RNH2_THEVO Length = 212 Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 21/174 (12%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYEEIKEKA 65 H ++ G+DE GRGP++G +V + V R I G+ DSK LS KRR L+++I K Sbjct: 2 HEEVQCGIDEAGRGPVIGPMVISIVCCKEEYLREI-GVKDSKMLSRKRREYLFDKIT-KN 59 Query: 66 LSWSLGRAEPHEIDE------LN-ILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL--P 116 ++S P +++ LN I +L + G+ + +I+ R K Sbjct: 60 CAYSYVVVSPETLNKDMASESLNKIEENYILELLSKAEGIVYIDCFDVIE-ERAEKYIRE 118 Query: 117 MPAMAVV---KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT 167 VV K DS P +SAASI++KV RD E +D + +YGF GYP+ Sbjct: 119 KSGKEVVCKHKADSIYPAVSAASIVSKVIRDRE---IDKIAEKYGFFGS-GYPS 168 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C5D8U9 Ribonuclease HII n=118 Tax=Bacteria RepID=RNH2_G... 284 1e-75 UniRef50_C8W5A6 Ribonuclease n=3 Tax=Bacteria RepID=C8W5A6_DESAS 281 8e-75 UniRef50_B1YS60 Ribonuclease HII n=13 Tax=cellular organisms Rep... 280 2e-74 UniRef50_B2T5I0 Ribonuclease HII n=16 Tax=Proteobacteria RepID=R... 280 2e-74 UniRef50_A1TN83 Ribonuclease HII n=11 Tax=Proteobacteria RepID=R... 279 3e-74 UniRef50_B1GZ18 Ribonuclease HII n=11 Tax=Bacteria RepID=RNH2_UNCTG 277 1e-73 UniRef50_Q6MDG7 Ribonuclease HII n=11 Tax=Chlamydiales RepID=RNH... 277 1e-73 UniRef50_A8FY28 Ribonuclease HII n=14 Tax=Bacteria RepID=RNH2_SHESH 275 9e-73 UniRef50_A9KLL7 Ribonuclease HII n=39 Tax=Bacteria RepID=RNH2_CLOPH 274 1e-72 UniRef50_C5NXH7 Ribonuclease n=1 Tax=Gemella haemolysans ATCC 10... 274 1e-72 UniRef50_B0K1U0 Ribonuclease n=12 Tax=Bacteria RepID=B0K1U0_THEPX 274 1e-72 UniRef50_A3DDG7 Ribonuclease HII n=6 Tax=Bacteria RepID=RNH2_CLOTH 274 2e-72 UniRef50_D1R4X2 Ribonuclease n=1 Tax=Parachlamydia acanthamoebae... 273 2e-72 UniRef50_A3NAT3 Ribonuclease HII n=37 Tax=Bacteria RepID=RNH2_BURP6 272 4e-72 UniRef50_Q043R9 Ribonuclease HII n=22 Tax=Firmicutes RepID=RNH2_... 270 1e-71 UniRef50_UPI00017443D3 Ribonuclease H n=1 Tax=Verrucomicrobium s... 270 2e-71 UniRef50_C0GHM4 Ribonuclease n=1 Tax=Dethiobacter alkaliphilus A... 269 3e-71 UniRef50_B5EBC6 Ribonuclease HII n=5 Tax=Deltaproteobacteria Rep... 269 3e-71 UniRef50_Q18BC9 Ribonuclease HII n=15 Tax=Bacteria RepID=RNH2_CLOD6 269 3e-71 UniRef50_Q03Y48 Ribonuclease HII n=10 Tax=Lactobacillales RepID=... 269 5e-71 UniRef50_C0EQ70 Ribonuclease n=2 Tax=Neisseria flavescens RepID=... 266 2e-70 UniRef50_Q5WFP1 Ribonuclease HII n=2 Tax=Bacillaceae RepID=RNH2_... 265 7e-70 UniRef50_A7H722 Ribonuclease HII n=9 Tax=Bacteria RepID=RNH2_ANADF 263 2e-69 UniRef50_C2ESF1 Ribonuclease n=5 Tax=Lactobacillaceae RepID=C2ES... 262 5e-69 UniRef50_Q2B7D6 Ribonuclease n=1 Tax=Bacillus sp. NRRL B-14911 R... 262 6e-69 UniRef50_B5W7X5 Ribonuclease n=2 Tax=Arthrospira RepID=B5W7X5_SPIMA 260 2e-68 UniRef50_C4Z936 Ribonuclease n=4 Tax=Clostridiales RepID=C4Z936_... 260 2e-68 UniRef50_A6NUN5 Ribonuclease n=1 Tax=Bacteroides capillosus ATCC... 258 7e-68 UniRef50_A0NVD9 Ribonuclease n=2 Tax=Rhodobacteraceae RepID=A0NV... 258 7e-68 UniRef50_Q1JGT2 Ribonuclease HII n=78 Tax=Firmicutes RepID=RNH2_... 258 7e-68 UniRef50_B8FRK8 Ribonuclease HII n=5 Tax=Bacteria RepID=RNH2_DESHD 258 8e-68 UniRef50_B0SZF7 Ribonuclease HII n=6 Tax=Caulobacteraceae RepID=... 258 8e-68 UniRef50_A7HQZ3 Ribonuclease HII n=43 Tax=Bacteria RepID=RNH2_PARL1 258 1e-67 UniRef50_Q3AC76 Ribonuclease HII n=1 Tax=Carboxydothermus hydrog... 258 1e-67 UniRef50_C6QIW2 Ribonuclease n=1 Tax=Hyphomicrobium denitrifican... 257 1e-67 UniRef50_Q0AWX1 Ribonuclease HII n=1 Tax=Syntrophomonas wolfei s... 257 2e-67 UniRef50_B5YFD2 Ribonuclease n=2 Tax=Dictyoglomus RepID=B5YFD2_D... 256 2e-67 UniRef50_D1C7S7 Ribonuclease n=1 Tax=Sphaerobacter thermophilus ... 256 3e-67 UniRef50_B9M597 Ribonuclease HII n=3 Tax=Deltaproteobacteria Rep... 256 3e-67 UniRef50_D2MIZ6 Ribonuclease HII n=1 Tax=Candidatus Poribacteria... 256 4e-67 UniRef50_A8SF05 Ribonuclease n=1 Tax=Faecalibacterium prausnitzi... 255 5e-67 UniRef50_Q73G60 Ribonuclease HII n=9 Tax=Rickettsiales RepID=RNH... 254 1e-66 UniRef50_Q1GD84 Ribonuclease HII n=22 Tax=Alphaproteobacteria Re... 254 1e-66 UniRef50_Q49X31 Ribonuclease HII n=55 Tax=Staphylococcus RepID=R... 254 1e-66 UniRef50_A5D1I3 Ribonuclease HII n=4 Tax=Bacteria RepID=RNH2_PELTS 254 1e-66 UniRef50_D1Q046 Ribonuclease n=2 Tax=Prevotella RepID=D1Q046_9BACT 254 2e-66 UniRef50_A5FIL7 Ribonuclease HII n=4 Tax=Flavobacteriales RepID=... 253 2e-66 UniRef50_B9EBC6 Ribonuclease HII n=3 Tax=Staphylococcaceae RepID... 253 3e-66 UniRef50_C4XFT1 Ribonuclease n=1 Tax=Mycoplasma fermentans PG18 ... 252 4e-66 UniRef50_Q0AEI5 Ribonuclease HII n=2 Tax=Nitrosomonas RepID=RNH2... 252 5e-66 UniRef50_B9XLY3 Ribonuclease n=1 Tax=bacterium Ellin514 RepID=B9... 252 5e-66 UniRef50_A5UX01 Ribonuclease HII n=8 Tax=Chloroflexi RepID=RNH2_... 251 1e-65 UniRef50_A6GPG3 Ribonuclease n=1 Tax=Limnobacter sp. MED105 RepI... 251 1e-65 UniRef50_B9DPH3 Ribonuclease HII n=1 Tax=Staphylococcus carnosus... 250 2e-65 UniRef50_C7NAV4 Ribonuclease n=5 Tax=Fusobacteriaceae RepID=C7NA... 250 2e-65 UniRef50_A4J661 Ribonuclease HII n=2 Tax=Clostridia RepID=RNH2_D... 250 2e-65 UniRef50_A8VRY1 Ribonuclease n=1 Tax=Bacillus selenitireducens M... 249 5e-65 UniRef50_Q5NNT2 Ribonuclease HII n=5 Tax=Alphaproteobacteria Rep... 249 5e-65 UniRef50_Q4FPF7 Ribonuclease HII n=3 Tax=Bacteria RepID=RNH2_PELUB 249 5e-65 UniRef50_C8WWC4 Ribonuclease n=2 Tax=Alicyclobacillus acidocalda... 249 5e-65 UniRef50_Q2P4B9 Ribonuclease HII n=19 Tax=cellular organisms Rep... 248 6e-65 UniRef50_Q024M2 Ribonuclease HII n=1 Tax=Candidatus Solibacter u... 248 6e-65 UniRef50_Q2JW45 Ribonuclease HII n=5 Tax=Cyanobacteria RepID=RNH... 248 8e-65 UniRef50_Q3Z8D7 Ribonuclease HII n=2 Tax=Dehalococcoides RepID=R... 248 1e-64 UniRef50_B2KC56 Ribonuclease n=1 Tax=Elusimicrobium minutum Pei1... 247 2e-64 UniRef50_D0NJ61 Ribonuclease n=1 Tax=Phytophthora infestans T30-... 247 2e-64 UniRef50_B8CW25 Ribonuclease n=1 Tax=Halothermothrix orenii H 16... 246 3e-64 UniRef50_C0QW88 Ribonuclease n=1 Tax=Brachyspira hyodysenteriae ... 246 3e-64 UniRef50_Q1MRU8 Ribonuclease HII n=2 Tax=Desulfovibrionales RepI... 246 4e-64 UniRef50_Q31PW0 Ribonuclease HII n=2 Tax=Synechococcus elongatus... 244 9e-64 UniRef50_Q8YP68 Ribonuclease HII n=19 Tax=Cyanobacteria RepID=RN... 244 2e-63 UniRef50_C6BVQ6 Ribonuclease n=4 Tax=Desulfovibrionales RepID=C6... 243 2e-63 UniRef50_A5IIL8 Ribonuclease HII n=7 Tax=Thermotogaceae RepID=RN... 243 3e-63 UniRef50_C1QE08 Ribonuclease n=1 Tax=Brachyspira murdochii DSM 1... 243 4e-63 UniRef50_D1VVL3 Ribonuclease n=1 Tax=Peptoniphilus lacrimalis 31... 243 4e-63 UniRef50_A8MHC7 Ribonuclease HII n=3 Tax=Firmicutes RepID=RNH2_A... 242 4e-63 UniRef50_A0LV66 Ribonuclease HII n=41 Tax=Actinomycetales RepID=... 242 6e-63 UniRef50_Q5FFD4 Ribonuclease HII n=5 Tax=Rickettsiales RepID=RNH... 241 8e-63 UniRef50_Q7VRD2 Ribonuclease HII n=1 Tax=Candidatus Blochmannia ... 240 2e-62 UniRef50_O67768 Ribonuclease HII n=3 Tax=Aquificaceae RepID=RNH2... 240 2e-62 UniRef50_Q3AP34 Ribonuclease HII n=7 Tax=Chlorobiaceae RepID=RNH... 239 3e-62 UniRef50_Q0SSB4 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2... 239 3e-62 UniRef50_Q2SRV0 Ribonuclease HII n=5 Tax=Mollicutes RepID=RNH2_M... 239 4e-62 UniRef50_Q0AMK3 Ribonuclease HII n=3 Tax=Proteobacteria RepID=RN... 239 5e-62 UniRef50_C9KJR4 Ribonuclease n=1 Tax=Mitsuokella multacida DSM 2... 238 6e-62 UniRef50_Q2S009 Ribonuclease HII n=1 Tax=Salinibacter ruber DSM ... 238 6e-62 UniRef50_C6PQZ2 Ribonuclease n=1 Tax=Clostridium carboxidivorans... 238 7e-62 UniRef50_C3MHC0 Ribonuclease HII n=12 Tax=Alphaproteobacteria Re... 238 8e-62 UniRef50_Q3A2F0 Ribonuclease HII n=3 Tax=Deltaproteobacteria Rep... 238 9e-62 UniRef50_Q03S83 Ribonuclease HII n=39 Tax=Lactobacillaceae RepID... 238 1e-61 UniRef50_Q11R91 Ribonuclease HII n=55 Tax=Bacteroidetes RepID=RN... 237 1e-61 UniRef50_C6X037 Ribonuclease n=1 Tax=Flavobacteriaceae bacterium... 237 2e-61 UniRef50_A9TVJ6 Ribonuclease n=2 Tax=cellular organisms RepID=A9... 237 2e-61 UniRef50_Q3B6X8 Ribonuclease HII n=5 Tax=Chlorobiaceae RepID=RNH... 236 2e-61 UniRef50_D0RRM6 Ribonuclease n=1 Tax=alpha proteobacterium HIMB1... 236 2e-61 UniRef50_Q6MLA0 Ribonuclease HII n=1 Tax=Bdellovibrio bacteriovo... 236 3e-61 UniRef50_B7IF45 Ribonuclease HII n=3 Tax=Thermotogaceae RepID=RN... 236 3e-61 UniRef50_B1VG82 Ribonuclease n=1 Tax=Corynebacterium urealyticum... 236 4e-61 UniRef50_B9ZNV1 Ribonuclease n=1 Tax=Thioalkalivibrio sp. K90mix... 236 4e-61 UniRef50_C4V2D5 Ribonuclease n=2 Tax=Clostridiales RepID=C4V2D5_... 236 4e-61 UniRef50_A1HN67 Ribonuclease n=3 Tax=Veillonellaceae RepID=A1HN6... 236 5e-61 UniRef50_C7RDQ2 Ribonuclease n=6 Tax=Clostridiales Family XI. In... 235 7e-61 UniRef50_B0N757 Ribonuclease n=4 Tax=Bacteria RepID=B0N757_9FIRM 234 9e-61 UniRef50_C1FF37 Ribonuclease n=3 Tax=Mamiellales RepID=C1FF37_9CHLO 234 1e-60 UniRef50_C9LMH5 Ribonuclease n=1 Tax=Dialister invisus DSM 15470... 234 1e-60 UniRef50_Q04F44 Ribonuclease n=2 Tax=Oenococcus oeni RepID=Q04F4... 234 1e-60 UniRef50_Q6NGJ8 Ribonuclease HII n=1 Tax=Corynebacterium diphthe... 234 1e-60 UniRef50_A9B6H3 Ribonuclease HII n=1 Tax=Herpetosiphon aurantiac... 234 2e-60 UniRef50_Q2GD69 Ribonuclease HII n=2 Tax=Neorickettsia RepID=RNH... 233 2e-60 UniRef50_C2C194 Ribonuclease n=1 Tax=Listeria grayi DSM 20601 Re... 233 2e-60 UniRef50_Q14PF8 Ribonuclease n=1 Tax=Spiroplasma citri RepID=Q14... 233 2e-60 UniRef50_B6BS88 Ribonuclease n=1 Tax=Candidatus Pelagibacter sp.... 233 3e-60 UniRef50_A5N820 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2... 233 3e-60 UniRef50_A5IZB4 Ribonuclease n=1 Tax=Mycoplasma agalactiae PG2 R... 233 4e-60 UniRef50_C5RBD5 Ribonuclease n=1 Tax=Weissella paramesenteroides... 231 8e-60 UniRef50_D1BMP6 Ribonuclease n=3 Tax=Veillonella RepID=D1BMP6_VEIPT 231 1e-59 UniRef50_A3ER37 Ribonuclease n=2 Tax=Leptospirillum sp. Group II... 230 2e-59 UniRef50_Q5PBG2 Ribonuclease HII n=6 Tax=Anaplasmataceae RepID=R... 230 2e-59 UniRef50_D0L036 Ribonuclease n=1 Tax=Halothiobacillus neapolitan... 229 3e-59 UniRef50_Q73MG1 Ribonuclease HII n=1 Tax=Treponema denticola Rep... 229 6e-59 UniRef50_B0TH73 Ribonuclease n=1 Tax=Heliobacterium modesticaldu... 229 6e-59 UniRef50_Q8RDX3 Ribonuclease HII n=12 Tax=Fusobacterium RepID=RN... 228 7e-59 UniRef50_C6XGP6 Ribonuclease n=1 Tax=Candidatus Liberibacter asi... 228 7e-59 UniRef50_C0GQX3 Ribonuclease n=1 Tax=Desulfonatronospira thiodis... 228 7e-59 UniRef50_A0LMM5 Ribonuclease HII n=10 Tax=Bacteria RepID=RNH2_SYNFM 227 1e-58 UniRef50_C4LJB6 Ribonuclease n=1 Tax=Corynebacterium kroppensted... 227 2e-58 UniRef50_C1AAT1 Ribonuclease n=1 Tax=Gemmatimonas aurantiaca T-2... 227 2e-58 UniRef50_Q313K1 Ribonuclease HII n=7 Tax=Desulfovibrio RepID=RNH... 226 3e-58 UniRef50_C9RN38 Ribonuclease n=1 Tax=Fibrobacter succinogenes su... 226 3e-58 UniRef50_Q5SLU5 Ribonuclease HII n=8 Tax=Deinococci RepID=RNH2_T... 226 4e-58 UniRef50_A9NF30 Ribonuclease HII n=2 Tax=Bacteria RepID=RNH2_ACHLI 225 6e-58 UniRef50_B2V752 Ribonuclease HII n=3 Tax=Sulfurihydrogenibium Re... 225 8e-58 UniRef50_A5HUH4 Ribonuclease n=1 Tax=uncultured bacterium RepID=... 223 3e-57 UniRef50_Q4A278 Putative ribonuclease n=2 Tax=dsDNA viruses, no ... 222 5e-57 UniRef50_A8RBU7 Ribonuclease n=4 Tax=Erysipelotrichaceae RepID=A... 222 5e-57 UniRef50_D2RIH6 Ribonuclease H n=2 Tax=Acidaminococcus RepID=D2R... 222 6e-57 UniRef50_A5PBF7 Ribonuclease n=2 Tax=Erythrobacter RepID=A5PBF7_... 222 6e-57 UniRef50_D2LBW7 Ribonuclease H n=1 Tax=Rhodomicrobium vannielii ... 222 6e-57 UniRef50_A0QV44 Ribonuclease HII n=27 Tax=Actinomycetales RepID=... 222 6e-57 UniRef50_Q11KH2 Ribonuclease HII n=47 Tax=Alphaproteobacteria Re... 221 9e-57 UniRef50_Q6AJE5 Ribonuclease HII n=1 Tax=Desulfotalea psychrophi... 221 9e-57 UniRef50_B2S1N3 Ribonuclease HII n=2 Tax=Borrelia RepID=RNH2_BORHD 221 1e-56 UniRef50_B3DVH3 Ribonuclease n=1 Tax=Methylacidiphilum infernoru... 221 1e-56 UniRef50_C0E2A8 Ribonuclease n=2 Tax=Corynebacterium matruchotii... 221 1e-56 UniRef50_C8PZH5 Ribonuclease n=1 Tax=Enhydrobacter aerosaccus SK... 221 1e-56 UniRef50_A5CDI4 Ribonuclease HII n=17 Tax=Rickettsieae RepID=RNH... 221 1e-56 UniRef50_A5WDY2 Ribonuclease HII n=1 Tax=Psychrobacter sp. PRwf-... 220 2e-56 UniRef50_B0JV09 Ribonuclease HII n=3 Tax=Chroococcales RepID=RNH... 219 3e-56 UniRef50_Q7U4C6 Ribonuclease HII n=18 Tax=Cyanobacteria RepID=RN... 219 4e-56 UniRef50_D1CBL6 Ribonuclease n=1 Tax=Thermobaculum terrenum ATCC... 219 4e-56 UniRef50_Q1IMM1 Ribonuclease HII n=2 Tax=Acidobacteria RepID=RNH... 219 5e-56 UniRef50_Q4FT93 Ribonuclease HII n=2 Tax=Psychrobacter RepID=RNH... 218 1e-55 UniRef50_A9H3E2 Ribonuclease HII n=10 Tax=Acetobacteraceae RepID... 218 1e-55 UniRef50_C7MNC1 Ribonuclease n=2 Tax=Coriobacteriaceae RepID=C7M... 216 3e-55 UniRef50_C1SJ31 Ribonuclease n=1 Tax=Denitrovibrio acetiphilus D... 216 4e-55 UniRef50_D1N706 Ribonuclease n=1 Tax=Victivallis vadensis ATCC B... 216 5e-55 UniRef50_A3VNV1 Ribonuclease n=1 Tax=Parvularcula bermudensis HT... 214 9e-55 UniRef50_A8TXS8 Ribonuclease n=1 Tax=alpha proteobacterium BAL19... 214 1e-54 UniRef50_A8EVA1 Ribonuclease HII n=4 Tax=Epsilonproteobacteria R... 214 1e-54 UniRef50_C2MC66 Ribonuclease n=1 Tax=Porphyromonas uenonis 60-3 ... 214 1e-54 UniRef50_Q7UZZ2 Ribonuclease HII n=7 Tax=Prochlorococcus marinus... 213 3e-54 UniRef50_C7PK08 Ribonuclease n=23 Tax=Bacteria RepID=C7PK08_CHIPD 212 5e-54 UniRef50_C6HV29 Ribonuclease n=1 Tax=Leptospirillum ferrodiazotr... 212 5e-54 UniRef50_D2SE00 Ribonuclease H n=2 Tax=Actinomycetales RepID=D2S... 212 5e-54 UniRef50_A9BI79 Ribonuclease n=1 Tax=Petrotoga mobilis SJ95 RepI... 211 8e-54 UniRef50_B7FYE5 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tr... 211 1e-53 UniRef50_A8SLV4 Ribonuclease n=2 Tax=Clostridiales Family XI. In... 210 2e-53 UniRef50_A6WW84 Ribonuclease HII n=4 Tax=Rhizobiales RepID=RNH2_... 210 3e-53 UniRef50_D1B6E3 Ribonuclease n=2 Tax=Synergistaceae RepID=D1B6E3... 209 4e-53 UniRef50_C0A3Z9 Ribonuclease n=1 Tax=Opitutaceae bacterium TAV2 ... 208 1e-52 UniRef50_Q0SPB8 Ribonuclease HII n=18 Tax=Bacteria RepID=RNH2_BORAP 207 2e-52 UniRef50_A6W7V4 Ribonuclease HII n=5 Tax=Actinomycetales RepID=R... 206 2e-52 UniRef50_B9L043 Ribonuclease n=1 Tax=Thermomicrobium roseum DSM ... 206 3e-52 UniRef50_C8PH70 Ribonuclease n=1 Tax=Campylobacter gracilis RM32... 204 9e-52 UniRef50_Q30TX0 Ribonuclease n=4 Tax=Helicobacteraceae RepID=Q30... 204 1e-51 UniRef50_A7I0I5 Ribonuclease HII n=7 Tax=Campylobacter RepID=RNH... 204 1e-51 UniRef50_Q67PD4 Ribonuclease HII 1 n=1 Tax=Symbiobacterium therm... 203 4e-51 UniRef50_B1ZMV3 Ribonuclease n=1 Tax=Opitutus terrae PB90-1 RepI... 201 1e-50 UniRef50_A0JXT5 Ribonuclease HII n=4 Tax=Micrococcaceae RepID=RN... 201 1e-50 UniRef50_C7MB80 Ribonuclease n=1 Tax=Brachybacterium faecium DSM... 201 1e-50 UniRef50_B3T7B1 Putative Ribonuclease HII n=1 Tax=uncultured mar... 200 2e-50 UniRef50_A4ECJ3 Ribonuclease n=3 Tax=Collinsella RepID=A4ECJ3_9ACTN 200 2e-50 UniRef50_Q6KH21 Ribonuclease n=1 Tax=Mycoplasma mobile RepID=Q6K... 199 4e-50 UniRef50_A7IES2 Ribonuclease HII n=10 Tax=Proteobacteria RepID=R... 199 5e-50 UniRef50_Q8EUA9 Ribonuclease n=1 Tax=Mycoplasma penetrans RepID=... 198 7e-50 UniRef50_C7MY90 Ribonuclease n=3 Tax=Actinomycetales RepID=C7MY9... 198 7e-50 UniRef50_Q04SW6 Ribonuclease n=4 Tax=Leptospira RepID=Q04SW6_LEPBJ 198 8e-50 UniRef50_C7R325 Ribonuclease n=2 Tax=Micrococcineae RepID=C7R325... 197 1e-49 UniRef50_B0S8P2 Ribonuclease n=2 Tax=Leptospira biflexa serovar ... 196 4e-49 UniRef50_A4S5U9 Ribonuclease (Fragment) n=1 Tax=Ostreococcus luc... 196 4e-49 UniRef50_B9L797 Ribonuclease n=3 Tax=Epsilonproteobacteria RepID... 196 4e-49 UniRef50_A5FW78 Ribonuclease HII n=3 Tax=Alphaproteobacteria Rep... 195 7e-49 UniRef50_C8WAJ0 Ribonuclease n=2 Tax=Atopobium RepID=C8WAJ0_ATOPD 195 8e-49 UniRef50_B8HA90 Ribonuclease n=2 Tax=Arthrobacter RepID=B8HA90_A... 194 1e-48 UniRef50_Q9ZJR1 Ribonuclease HII n=15 Tax=Helicobacteraceae RepI... 193 2e-48 UniRef50_C5LZG5 Ribonuclease n=5 Tax=Eukaryota RepID=C5LZG5_9ALVE 192 6e-48 UniRef50_Q13BU3 Ribonuclease HII n=19 Tax=Bacteria RepID=RNH2_RHOPS 192 8e-48 UniRef50_Q3XZB5 Ribonuclease n=1 Tax=Enterococcus faecium DO Rep... 191 9e-48 UniRef50_B6BTW0 Ribonuclease n=1 Tax=beta proteobacterium KB13 R... 189 7e-47 UniRef50_B1LVZ9 Ribonuclease n=9 Tax=Alphaproteobacteria RepID=B... 188 7e-47 UniRef50_A7H1A3 Ribonuclease HII n=16 Tax=Campylobacter RepID=RN... 187 2e-46 UniRef50_UPI000051041B ribonuclease HII n=1 Tax=Brevibacterium l... 184 1e-45 UniRef50_B4U9C0 Ribonuclease n=1 Tax=Hydrogenobaculum sp. Y04AAS... 184 2e-45 UniRef50_A4J2Z7 Ribonuclease n=1 Tax=Desulfotomaculum reducens M... 179 6e-44 UniRef50_C8WGY3 Ribonuclease n=3 Tax=Coriobacteriaceae RepID=C8W... 177 1e-43 UniRef50_UPI000197799D ribonuclease HII n=1 Tax=Helicobacter cin... 176 3e-43 UniRef50_B5Y443 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tr... 176 3e-43 UniRef50_B1VXS2 Ribonuclease HII n=10 Tax=Actinomycetales RepID=... 175 9e-43 UniRef50_Q82KF0 Ribonuclease HII n=15 Tax=Actinomycetales RepID=... 174 2e-42 UniRef50_C7LXT7 Ribonuclease n=1 Tax=Acidimicrobium ferrooxidans... 173 3e-42 UniRef50_C3XGM9 Ribonuclease n=1 Tax=Helicobacter bilis ATCC 438... 172 8e-42 UniRef50_D2NTN7 Ribonuclease HII n=2 Tax=Rothia mucilaginosa Rep... 172 8e-42 UniRef50_Q7VK86 Ribonuclease n=1 Tax=Helicobacter hepaticus RepI... 170 3e-41 UniRef50_B6YVT5 Ribonuclease HII n=10 Tax=Euryarchaeota RepID=RN... 168 9e-41 UniRef50_UPI0001C31AB6 Ribonuclease H n=1 Tax=Conexibacter woese... 168 9e-41 UniRef50_C1RMG0 Ribonuclease n=1 Tax=Cellulomonas flavigena DSM ... 165 9e-40 UniRef50_A0ZZY2 Ribonuclease n=11 Tax=Bifidobacteriaceae RepID=A... 162 6e-39 UniRef50_Q5MCR3 Ribonuclease n=4 Tax=Leishmania RepID=Q5MCR3_LEIMA 162 7e-39 UniRef50_Q1AW72 Ribonuclease n=1 Tax=Rubrobacter xylanophilus DS... 161 1e-38 UniRef50_B5Y8F7 Ribonuclease n=1 Tax=Coprothermobacter proteolyt... 159 5e-38 UniRef50_C2BVF7 Ribonuclease n=1 Tax=Mobiluncus curtisii ATCC 43... 158 8e-38 UniRef50_B5JFA5 Ribonuclease n=1 Tax=Verrucomicrobiae bacterium ... 158 9e-38 UniRef50_Q6AEA6 Ribonuclease n=2 Tax=Actinobacteria (class) RepI... 156 3e-37 UniRef50_B8C6T8 Ribonuclease n=1 Tax=Thalassiosira pseudonana Re... 156 5e-37 UniRef50_Q4JA60 Ribonuclease HII n=12 Tax=Sulfolobaceae RepID=RN... 155 8e-37 UniRef50_C8PNM3 Ribonuclease n=1 Tax=Treponema vincentii ATCC 35... 154 1e-36 UniRef50_A7I9P7 Ribonuclease HII n=4 Tax=Methanomicrobiales RepI... 154 2e-36 UniRef50_B6UB68 Ribonuclease n=1 Tax=Zea mays RepID=B6UB68_MAIZE 152 5e-36 UniRef50_A5ULV6 Ribonuclease HII n=3 Tax=Methanobacteriaceae Rep... 152 6e-36 UniRef50_C5BWW5 Ribonuclease n=7 Tax=Actinomycetales RepID=C5BWW... 152 7e-36 UniRef50_Q468N6 Ribonuclease HII n=4 Tax=Methanosarcinaceae RepI... 151 2e-35 UniRef50_UPI000038E392 ribonuclease HII n=1 Tax=Ferroplasma acid... 150 2e-35 UniRef50_A2DUE3 Ribonuclease n=1 Tax=Trichomonas vaginalis RepID... 149 7e-35 UniRef50_B1L3S7 Ribonuclease n=1 Tax=Candidatus Korarchaeum cryp... 148 1e-34 UniRef50_A8MAH5 Ribonuclease HII n=2 Tax=Thermoproteaceae RepID=... 148 1e-34 UniRef50_A1RYM0 Ribonuclease HII n=1 Tax=Thermofilum pendens Hrk... 147 1e-34 UniRef50_A2BL34 Ribonuclease HII n=1 Tax=Hyperthermus butylicus ... 147 3e-34 UniRef50_A4WHQ7 Ribonuclease HII n=4 Tax=Pyrobaculum RepID=RNH2_... 145 6e-34 UniRef50_UPI00006CE52A ribonuclease HII family protein n=1 Tax=T... 145 9e-34 UniRef50_UPI00019264AB PREDICTED: similar to ribonuclease H2, la... 145 1e-33 UniRef50_UPI0001C41F2F ribonuclease HII RnhB n=1 Tax=Methanobrev... 144 1e-33 UniRef50_A0RV25 Ribonuclease HII n=2 Tax=Thaumarchaeota RepID=RN... 142 5e-33 UniRef50_Q9SEZ6 Ribonuclease H2 subunit A n=9 Tax=Embryophyta Re... 142 5e-33 UniRef50_B7GN37 Ribonuclease n=5 Tax=Bifidobacterium longum RepI... 142 6e-33 UniRef50_D2RFM0 Ribonuclease HII n=1 Tax=Archaeoglobus profundus... 142 8e-33 UniRef50_B6ACV8 Ribonuclease n=1 Tax=Cryptosporidium muris RN66 ... 141 1e-32 UniRef50_C4VBD8 Ribonuclease n=1 Tax=Nosema ceranae BRL01 RepID=... 140 2e-32 UniRef50_A0B796 Ribonuclease HII n=1 Tax=Methanosaeta thermophil... 140 3e-32 UniRef50_O75792 Ribonuclease H2 subunit A n=20 Tax=Chordata RepI... 139 4e-32 UniRef50_Q0W5R8 Ribonuclease HII n=2 Tax=Euryarchaeota RepID=RNH... 139 4e-32 Sequences not found previously or not previously below threshold: >UniRef50_C5D8U9 Ribonuclease HII n=118 Tax=Bacteria RepID=RNH2_GEOSW Length = 277 Score = 284 bits (727), Expect = 1e-75, Method: Composition-based stats. Identities = 89/194 (45%), Positives = 119/194 (61%), Gaps = 1/194 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + + +AG+DE GRGPL G VV AAV+L I GLNDSKKLSE +R L+ I+ Sbjct: 65 QLFEQGIEYIAGIDEAGRGPLAGPVVAAAVMLPKDAYIPGLNDSKKLSEAKREMLFHMIQ 124 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 A+S +G EIDE+NI AT AM +AV L P+Y+LID P + P ++ Sbjct: 125 SCAISIGIGVVTAAEIDEMNIYEATKKAMIKAVEQLSPKPDYLLIDAMTLP-ISTPQQSI 183 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD+ I+A+SI+AKVTRD M L +PQYGF ++ GY TA HLE + +G + Sbjct: 184 VKGDANSVSIAASSIIAKVTRDHFMKQLAKQYPQYGFEKNMGYGTAQHLEAIRVYGTIDE 243 Query: 183 HRRSFGPVKRALGL 196 HRRSF P+K + + Sbjct: 244 HRRSFSPIKEMIEM 257 >UniRef50_C8W5A6 Ribonuclease n=3 Tax=Bacteria RepID=C8W5A6_DESAS Length = 268 Score = 281 bits (720), Expect = 8e-75, Method: Composition-based stats. Identities = 97/190 (51%), Positives = 120/190 (63%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 ++ L+AGVDE GRGPL G VV AAVIL + GLNDSKKL R L+ IK Sbjct: 67 KYRSKGFGLIAGVDEAGRGPLAGPVVAAAVILPENACLPGLNDSKKLPVSARERLFVAIK 126 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 ALSW++G A EI ELNIL A++LAM R+V L + P++VL+DG LP+P ++ Sbjct: 127 PIALSWAVGMASVEEICELNILQASLLAMCRSVDSLKVKPDFVLVDGPNGLNLPLPQYSL 186 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD+ I++ASILAKVTRD M FP+YGF +HKGYPT HL L +G Sbjct: 187 VKGDTLSASIASASILAKVTRDKIMLEYHDEFPEYGFDRHKGYPTVEHLRALTRYGPCRI 246 Query: 183 HRRSFGPVKR 192 HRR F PVK Sbjct: 247 HRRDFKPVKD 256 >UniRef50_B1YS60 Ribonuclease HII n=13 Tax=cellular organisms RepID=RNH2_BURA4 Length = 217 Score = 280 bits (717), Expect = 2e-74, Method: Composition-based stats. Identities = 116/195 (59%), Positives = 133/195 (68%), Gaps = 1/195 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 +F P ++V GVDE GRGPL G VV AAVILDPARPI GL+DSK LS K+R ALY+ I Sbjct: 19 FDFSRPD-EIVCGVDEAGRGPLAGPVVAAAVILDPARPIDGLDDSKALSAKKRDALYDLI 77 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 +A ++ + A EID LNILHATMLAM+RAV GL + P IDGNRCP L + A A Sbjct: 78 VARASAFCVASASVDEIDTLNILHATMLAMKRAVEGLSVLPTLAQIDGNRCPTLTVRAEA 137 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +V GD+ VP ISAASILAKVTRD + L FP YGF H GY T HL L EHG E Sbjct: 138 IVSGDALVPSISAASILAKVTRDRMLVDLHERFPVYGFNVHVGYSTPQHLAALREHGPCE 197 Query: 182 HHRRSFGPVKRALGL 196 HRRSF PV+ AL L Sbjct: 198 VHRRSFAPVREALDL 212 >UniRef50_B2T5I0 Ribonuclease HII n=16 Tax=Proteobacteria RepID=RNH2_BURPP Length = 248 Score = 280 bits (716), Expect = 2e-74, Method: Composition-based stats. Identities = 109/193 (56%), Positives = 132/193 (68%), Gaps = 2/193 (1%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEE 60 + F P +V GVDE GRGPL G VV AAVI DP++P I GL+DSK L+ K+R LY++ Sbjct: 22 LNFETPD-DIVCGVDEAGRGPLAGPVVAAAVIFDPSKPMIRGLDDSKVLTAKKRDELYDK 80 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 I ++AL++ + A EID LNILHATMLAM+RAV GL + P V IDGNRCP L + + Sbjct: 81 IVDRALAYCIASATVEEIDSLNILHATMLAMKRAVEGLSVVPTLVKIDGNRCPTLSVRSE 140 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 AV+ GD+ V ISAASILAKVTRD + L P YGF H GY T HL+ L EHG Sbjct: 141 AVIGGDALVKSISAASILAKVTRDRMLLELHQTHPVYGFNAHAGYGTPQHLKALREHGPC 200 Query: 181 EHHRRSFGPVKRA 193 EHHRRSF PV+ A Sbjct: 201 EHHRRSFAPVREA 213 >UniRef50_A1TN83 Ribonuclease HII n=11 Tax=Proteobacteria RepID=RNH2_ACIAC Length = 240 Score = 279 bits (715), Expect = 3e-74, Method: Composition-based stats. Identities = 115/184 (62%), Positives = 130/184 (70%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 LVAGVDE GRGPL G VV AAVILD +PI GL DSK L+ RR AL++EI+ KAL S+ Sbjct: 22 LVAGVDEAGRGPLAGPVVAAAVILDELQPIEGLADSKTLTAARREALFDEIRAKALCCSV 81 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 A EID LNIL ATMLAM+RAVAGL + P VL+DGNR P L +PA A+VKGD+ V Sbjct: 82 AEATVEEIDTLNILQATMLAMRRAVAGLRLKPVRVLVDGNRLPPLDVPAEAIVKGDALVQ 141 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ISAASILAKVTRD A L +P YGFA HKGY TA H+ L HGA HRRSF PV Sbjct: 142 AISAASILAKVTRDRWCAQLHEAYPHYGFASHKGYGTAEHMAALQAHGACPEHRRSFAPV 201 Query: 191 KRAL 194 A+ Sbjct: 202 AAAV 205 >UniRef50_B1GZ18 Ribonuclease HII n=11 Tax=Bacteria RepID=RNH2_UNCTG Length = 210 Score = 277 bits (710), Expect = 1e-73, Method: Composition-based stats. Identities = 91/188 (48%), Positives = 111/188 (59%), Gaps = 1/188 (0%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG+DE GRGPL G VV A VIL I LNDSK+LSEK+R L+E IKE AL +++ Sbjct: 20 VAGIDEAGRGPLAGPVVAAVVILPKDSAIPYLNDSKQLSEKKREILFEIIKETALDYAVE 79 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKGDSRVP 130 IDE+NIL AT LAM RAV L P+ LIDGNR L +V GD++ Sbjct: 80 LVNNEIIDEINILQATFLAMSRAVLKLKTQPDLYLIDGNRKVHGLSFNQETIVGGDAKSA 139 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAKV+RD M +P Y F +HKGY T H+E L +HG HR +F PV Sbjct: 140 CIAAASILAKVSRDKMMLEYAKQYPVYEFEKHKGYGTKKHIEALKKHGICPIHRLTFSPV 199 Query: 191 KRALGLAS 198 + Sbjct: 200 NDIISQTK 207 >UniRef50_Q6MDG7 Ribonuclease HII n=11 Tax=Chlamydiales RepID=RNH2_PARUW Length = 222 Score = 277 bits (710), Expect = 1e-73, Method: Composition-based stats. Identities = 88/193 (45%), Positives = 114/193 (59%), Gaps = 1/193 (0%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK-E 63 QL+AG+DE GRGPL G VV AA IL + +NDSKKLS K R L+E + + Sbjct: 24 FSQGYQLIAGIDEAGRGPLAGPVVAAACILPKGLLVPQINDSKKLSPKVRERLFERLTTD 83 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 A+ + +G EID +NI AT+LAM A+ L + P+YVL+DG P +P + ++ Sbjct: 84 SAVRYGIGIIGQAEIDRVNIYQATILAMLMAIQQLPVTPDYVLVDGMNLPHPDLPCLKII 143 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGD I+AASI+AK TRD M +P YGF QHKGY T HLE L + G H Sbjct: 144 KGDQLSQSIAAASIIAKETRDRLMCQYHREWPGYGFNQHKGYATELHLEALFKQGPCPIH 203 Query: 184 RRSFGPVKRALGL 196 RRSF P+K L + Sbjct: 204 RRSFDPIKSMLEV 216 >UniRef50_A8FY28 Ribonuclease HII n=14 Tax=Bacteria RepID=RNH2_SHESH Length = 213 Score = 275 bits (703), Expect = 9e-73, Method: Composition-based stats. Identities = 127/193 (65%), Positives = 142/193 (73%), Gaps = 8/193 (4%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L AGVDEVGRGPLVG VVTAAVILDP +PI GLNDSKKLSEK+R AL+ EI EKAL+ S+ Sbjct: 19 LYAGVDEVGRGPLVGNVVTAAVILDPTKPITGLNDSKKLSEKKREALFTEIHEKALAISI 78 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL--------PMPAMAV 122 G A P EIDELNILHATMLAMQRAVAGL +AP VL+DGNR P + + A+ Sbjct: 79 GYASPEEIDELNILHATMLAMQRAVAGLDMAPTSVLVDGNRTPDFSHGEDTDRNIESHAI 138 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD V ISAASI+AKV RD EM LD+ PQYGFA+HKGYPT H E LA HG Sbjct: 139 IKGDGLVAGISAASIVAKVIRDREMDLLDMEHPQYGFAKHKGYPTKAHFEALALHGVLPE 198 Query: 183 HRRSFGPVKRALG 195 HR+SF PVK L Sbjct: 199 HRKSFRPVKERLA 211 >UniRef50_A9KLL7 Ribonuclease HII n=39 Tax=Bacteria RepID=RNH2_CLOPH Length = 254 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 92/185 (49%), Positives = 122/185 (65%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E YP + + G+DEVGRGPL G V+ AVIL I +NDSK+LSEK+R ALY+EI Sbjct: 63 ELSYPDYRYICGIDEVGRGPLAGPVIACAVILPKDCEILYINDSKQLSEKKREALYDEIM 122 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 EKA+S +G A I+E+NIL AT AM+ A+ L + PE +L D PK+ +P + + Sbjct: 123 EKAISVGIGSASHARIEEINILQATYEAMRGAINKLGVVPELLLNDAVTIPKVVIPQVPI 182 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD++ I+AASI+AKVTRD M D VFP YGFA +KGY +A H++ L E G + Sbjct: 183 IKGDAKSISIAAASIVAKVTRDRLMVEYDTVFPGYGFASNKGYGSADHIKALKELGPSPI 242 Query: 183 HRRSF 187 HR SF Sbjct: 243 HRASF 247 >UniRef50_C5NXH7 Ribonuclease n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH7_9BACL Length = 258 Score = 274 bits (701), Expect = 1e-72, Method: Composition-based stats. Identities = 86/188 (45%), Positives = 119/188 (63%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 + + G+DEVGRGPL G VV AAVIL GLNDSKKLSEK+R LYE+I+++A+ Sbjct: 65 NGCKYICGIDEVGRGPLAGPVVAAAVILKKDNYFEGLNDSKKLSEKKREELYEQIRKEAV 124 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 ++++ + EI++ NI +A +AMQRAV L + P+++LID P+P ++VKGD Sbjct: 125 AYAICEVDNIEIEKYNIYNAARIAMQRAVEKLEVKPDFLLIDAMPFENYPIPNFSMVKGD 184 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 + I+AAS++AKV RD M +P Y F + GY T HLE L EHG T HRR Sbjct: 185 EKSVSIAAASVIAKVYRDNLMKEYAKKYPHYDFENNAGYGTKKHLEGLKEHGVTPIHRRD 244 Query: 187 FGPVKRAL 194 F P+K + Sbjct: 245 FEPIKSMI 252 >UniRef50_B0K1U0 Ribonuclease n=12 Tax=Bacteria RepID=B0K1U0_THEPX Length = 242 Score = 274 bits (701), Expect = 1e-72, Method: Composition-based stats. Identities = 84/185 (45%), Positives = 120/185 (64%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + + +AGVDE GRGPLVG VV A VIL I +NDSKKLSE++R L E IK Sbjct: 51 QLYQLNLNFIAGVDEAGRGPLVGPVVAACVILPKEVFIPEINDSKKLSEEKREVLSEVIK 110 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 + A+S+++G + EID++NIL+AT AMQ A++ + +Y+L+D P++ + A+ Sbjct: 111 KVAISYAIGIVDCEEIDKINILNATYKAMQIAISKIQQKIDYLLVDAITIPQIEINQKAI 170 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGDS+ I+AASILAKV RD M ++PQY F ++KGY T H+E L ++G Sbjct: 171 VKGDSKSISIAAASILAKVERDKIMKEYHKIYPQYNFEKNKGYGTKEHIEALKKYGPCPI 230 Query: 183 HRRSF 187 HR++F Sbjct: 231 HRKTF 235 >UniRef50_A3DDG7 Ribonuclease HII n=6 Tax=Bacteria RepID=RNH2_CLOTH Length = 256 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 84/185 (45%), Positives = 118/185 (63%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E +L+AG+DE GRGPL G VV AAVIL I GLNDSKKL+E +R L++ I Sbjct: 66 EAYQRGYKLIAGIDEAGRGPLAGPVVAAAVILPQDVFIEGLNDSKKLTENQREKLFDVIN 125 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 +KA+ +G + +IDE+NIL+AT AM+ AV L P+ + ID + + + ++ Sbjct: 126 DKAIGVGIGIVDEKQIDEINILNATKKAMKLAVGNLKPVPDILFIDSLKLDDINIEQNSI 185 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD++ I+AASI+AKVTRD + +D +P YGFA+HKGY T H+E + ++G Sbjct: 186 VKGDAKSVSIAAASIIAKVTRDRILREMDKKYPMYGFARHKGYGTGEHIEAIKKYGICPI 245 Query: 183 HRRSF 187 HR SF Sbjct: 246 HRVSF 250 >UniRef50_D1R4X2 Ribonuclease n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4X2_9CHLA Length = 232 Score = 273 bits (699), Expect = 2e-72, Method: Composition-based stats. Identities = 88/189 (46%), Positives = 115/189 (60%), Gaps = 1/189 (0%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 +LVAGVDE GRGPL G VV AA IL P + G+NDSKKL+ ++R L++EI Sbjct: 34 RQGYKLVAGVDEAGRGPLAGPVVAAACILPPRFRVPGVNDSKKLTPQKRAQLFQEITTHP 93 Query: 66 -LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 + + +G ID +NIL AT+ AM AV L P+ +L+DG + P +P ++ Sbjct: 94 KVIYGVGIVATEIIDTINILQATIQAMLDAVNQLSSQPQALLVDGLQLPHPVIPCQKLIH 153 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GDS I+AASI+AK TRD M LD +P YGFAQHKGY T HL+ L EHG HR Sbjct: 154 GDSLSLCIAAASIIAKETRDRLMVELDQQWPAYGFAQHKGYGTQQHLDALREHGPCPIHR 213 Query: 185 RSFGPVKRA 193 ++F P+K Sbjct: 214 KTFEPIKSM 222 >UniRef50_A3NAT3 Ribonuclease HII n=37 Tax=Bacteria RepID=RNH2_BURP6 Length = 214 Score = 272 bits (697), Expect = 4e-72, Method: Composition-based stats. Identities = 115/195 (58%), Positives = 135/195 (69%), Gaps = 1/195 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 ++F P ++V GVDE GRGPL G VV AAV+LDPARPI GL+DSK LS K+R L++EI Sbjct: 19 LDFDAPG-EIVCGVDEAGRGPLAGPVVAAAVVLDPARPIVGLDDSKALSAKKRERLFDEI 77 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 AL++S+ A EID LNILHATMLAM+RAV GL + P IDGNRCP L + + A Sbjct: 78 VVHALAYSVASASVEEIDSLNILHATMLAMKRAVEGLSVLPTLAKIDGNRCPMLAIRSEA 137 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +V GD+ VP ISAASILAKVTRD + L FP YGF H GY T HL L EHG E Sbjct: 138 IVGGDALVPSISAASILAKVTRDRMLVELHQQFPMYGFDAHAGYGTPQHLAALREHGPCE 197 Query: 182 HHRRSFGPVKRALGL 196 HHRRSF PV+ A L Sbjct: 198 HHRRSFAPVREAFDL 212 >UniRef50_Q043R9 Ribonuclease HII n=22 Tax=Firmicutes RepID=RNH2_LACGA Length = 250 Score = 270 bits (692), Expect = 1e-71, Method: Composition-based stats. Identities = 91/189 (48%), Positives = 119/189 (62%), Gaps = 1/189 (0%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 + +QLVAGVDEVGRGPL G VVTAAVIL + +NDSKKLS K+R L+ +I K Sbjct: 61 FWQKSQLVAGVDEVGRGPLAGPVVTAAVILPHNFDLIDVNDSKKLSPKKRKELFPKILAK 120 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A+S S+G A ID +NI A LAM AV GL + P+ +L+D P L +P + ++ Sbjct: 121 AVSVSVGLANNDVIDRINIYEADRLAMAHAVQGLKVKPDALLVDAMNVP-LNIPQVKLIH 179 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD++ I+AASI+AKV RD M A V+P+Y F + GY T H+E L ++G T HR Sbjct: 180 GDAKSNSIAAASIVAKVFRDNLMDAYGEVYPEYDFKHNAGYGTREHMEALKKYGPTPIHR 239 Query: 185 RSFGPVKRA 193 RSF PV Sbjct: 240 RSFAPVSEY 248 >UniRef50_UPI00017443D3 Ribonuclease H n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017443D3 Length = 233 Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats. Identities = 95/192 (49%), Positives = 118/192 (61%), Gaps = 1/192 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 +E Q+VAGVDE GRGPL G V AAVIL A L+DSK+L+E RR +Y+E+ Sbjct: 34 MELRQEGHQVVAGVDEAGRGPLAGPVSVAAVILPDDFTHAELHDSKQLTELRRERIYDEL 93 Query: 62 KEKA-LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 +A + W E EID +NIL AT + M+RAV GL + P VLIDG P P+P Sbjct: 94 MGRADVLWCHVMVEVDEIDRINILQATRMGMRRAVQGLSMLPHAVLIDGTPVPDFPVPHR 153 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 A+VKGD+ I+AAS++AKV RD M + +P YGF QHKGY T HLE L HG Sbjct: 154 ALVKGDALSLSIAAASVIAKVARDRLMRQAALDYPVYGFDQHKGYGTPEHLEALRRHGPC 213 Query: 181 EHHRRSFGPVKR 192 HRRSF PV + Sbjct: 214 PLHRRSFSPVSQ 225 >UniRef50_C0GHM4 Ribonuclease n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHM4_9FIRM Length = 260 Score = 269 bits (689), Expect = 3e-71, Method: Composition-based stats. Identities = 88/181 (48%), Positives = 115/181 (63%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 +AGVDE GRGPL G VV AVIL +AGLNDSKKL+ ++R LYE I +A+ Sbjct: 73 KGFTYIAGVDEAGRGPLAGPVVAGAVILPDNFFLAGLNDSKKLTPQKREELYEAITSEAV 132 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 +WS+G E EID++NIL A+ LAM RA+ L + P+Y L+D +LP VV GD Sbjct: 133 AWSVGIGEVWEIDDINILQASKLAMYRALLTLSVKPDYALLDALELEELPFAQQGVVGGD 192 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 I+AAS++AKVTRD M + ++P YGF+ HKGYPTA H +A+ G HR+S Sbjct: 193 GLSLSIAAASVVAKVTRDRLMCEQEKMYPGYGFSLHKGYPTAEHRSAIAKLGPCPIHRKS 252 Query: 187 F 187 F Sbjct: 253 F 253 >UniRef50_B5EBC6 Ribonuclease HII n=5 Tax=Deltaproteobacteria RepID=RNH2_GEOBB Length = 230 Score = 269 bits (689), Expect = 3e-71, Method: Composition-based stats. Identities = 86/192 (44%), Positives = 117/192 (60%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + + +AG+DE GRGPL G VV AAV+L + G+NDSK+L+E++R L++ I Sbjct: 21 QALRRGYFRIAGIDEAGRGPLAGPVVAAAVMLPAGLLLPGVNDSKQLTEEKREELFDVIH 80 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 +AL+ +G + +D +NIL AT+ AM+ AV L I P ++LIDG + +P V Sbjct: 81 REALAVGVGIGDHALVDSINILQATLSAMRDAVRALSITPGFLLIDGISNIPMNIPQRTV 140 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 KGDS I+AASI+AKVTRD M D +P YGFA HKGY A HL +AE G Sbjct: 141 KKGDSLSLSIAAASIIAKVTRDRMMVEYDAQYPGYGFASHKGYGAASHLAAIAELGPCPI 200 Query: 183 HRRSFGPVKRAL 194 HR++F VK L Sbjct: 201 HRKTFSGVKEHL 212 >UniRef50_Q18BC9 Ribonuclease HII n=15 Tax=Bacteria RepID=RNH2_CLOD6 Length = 255 Score = 269 bits (689), Expect = 3e-71, Method: Composition-based stats. Identities = 87/181 (48%), Positives = 117/181 (64%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 + G+DE GRGPL G VV + V+ I G+NDSKKLSE +R L+E IKE+AL Sbjct: 70 KGYLYIGGIDEAGRGPLAGPVVASVVVFKKDTKIEGVNDSKKLSEAKRDELFEVIKEEAL 129 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 + +G EIDE NIL+AT +AM++A+ L AP+Y+L+D P + + +VKGD Sbjct: 130 DYGIGIVNNEEIDEFNILNATYMAMKKAINCLKKAPDYLLVDAATIPGIDISQNPIVKGD 189 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S+ I+AASILAKVTRD+ M D V+P+YGF HKGY T H E + ++G T HR+S Sbjct: 190 SKSISIAAASILAKVTRDSIMYQYDRVYPEYGFKSHKGYGTKEHYEAIEKYGITPIHRKS 249 Query: 187 F 187 F Sbjct: 250 F 250 >UniRef50_Q03Y48 Ribonuclease HII n=10 Tax=Lactobacillales RepID=RNH2_LEUMM Length = 253 Score = 269 bits (688), Expect = 5e-71, Method: Composition-based stats. Identities = 91/192 (47%), Positives = 120/192 (62%), Gaps = 1/192 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 ++ L+AGVDEVGRGPL G VV AAVIL + + DSK+LS K+R LY++I Sbjct: 63 QYWMQGYDLIAGVDEVGRGPLAGPVVAAAVILPHDFDVLDVIDSKQLSAKKRDELYDKII 122 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 EKA+S +GR E IDE+NI A +AM AV L PE +LID R L +P + Sbjct: 123 EKAISIGVGRVEASIIDEINIYEAARVAMTEAVNQLAPIPEALLIDAMRL-DLDLPQEFL 181 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD+R I AASI+AKVTRD MA+ + +P YGF ++ GY T HLE + + G T Sbjct: 182 IKGDARSNSIGAASIIAKVTRDRLMASYGLKYPGYGFEKNAGYGTKEHLEGIKKIGITPI 241 Query: 183 HRRSFGPVKRAL 194 HR++F P+K L Sbjct: 242 HRKTFAPIKDIL 253 >UniRef50_C0EQ70 Ribonuclease n=2 Tax=Neisseria flavescens RepID=C0EQ70_NEIFL Length = 230 Score = 266 bits (682), Expect = 2e-70, Method: Composition-based stats. Identities = 115/191 (60%), Positives = 137/191 (71%), Gaps = 1/191 (0%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 T L AGVDE GRGPLVG+V AAVIL + GL DSKKLSEK+R L + IKE+A++W Sbjct: 36 TVLSAGVDEAGRGPLVGSVFAAAVILPEHFDLPGLTDSKKLSEKKRDMLAQMIKEQAVAW 95 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDS 127 S+ A+P EI +LNILHATM AM+RAV GL +AP+ V IDGNR PK L +PA AVVKGDS Sbjct: 96 SIAFADPDEILKLNILHATMAAMKRAVEGLSVAPDKVWIDGNRVPKDLNVPAEAVVKGDS 155 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ++ EISAAS+LAK RDAEM L +PQYGF +HKGY TA HL L ++G HRR F Sbjct: 156 KIIEISAASVLAKTARDAEMYELAKRYPQYGFDRHKGYGTAQHLAALKQYGVLLEHRRDF 215 Query: 188 GPVKRALGLAS 198 PVK L + Sbjct: 216 APVKTLLAQGN 226 >UniRef50_Q5WFP1 Ribonuclease HII n=2 Tax=Bacillaceae RepID=RNH2_BACSK Length = 259 Score = 265 bits (678), Expect = 7e-70, Method: Composition-based stats. Identities = 82/188 (43%), Positives = 112/188 (59%), Gaps = 1/188 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E V GVDEVGRGPL G V A IL + GL DSKKLS+ +R + I Sbjct: 62 ELKQRGYVAVCGVDEVGRGPLAGPVTACACILPDDFQLLGLTDSKKLSKAKREEYAKMIS 121 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E+A+++S+ EIDE+NIL AT AM +A+ GL +++L+D R +P+ ++ Sbjct: 122 EQAVAYSIASVSAAEIDEINILQATKKAMTKAINGLSQKTDHLLLDAVRL-DVPIAQTSL 180 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD++ I+A+S+LAKV RD M L +P YGF H GY TA HL+ L +G T Sbjct: 181 IKGDAKSLSIAASSVLAKVWRDRYMEELAQTYPGYGFDTHAGYGTASHLQALRTYGMTPE 240 Query: 183 HRRSFGPV 190 HR+SF PV Sbjct: 241 HRKSFRPV 248 >UniRef50_A7H722 Ribonuclease HII n=9 Tax=Bacteria RepID=RNH2_ANADF Length = 315 Score = 263 bits (673), Expect = 2e-69, Method: Composition-based stats. Identities = 95/187 (50%), Positives = 118/187 (63%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 LVAGVDE G PL G VV A IL G++DSK+L + R L E+IK A+ W++ Sbjct: 79 LVAGVDEAGMAPLAGPVVAGACILPRDYRPRGIDDSKQLDRRERERLAEDIKANAVCWAV 138 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 RAE EID LNI A +LA+ RAV L AP +VL+D + P+L +P ++ GD+ Sbjct: 139 ARAEVEEIDRLNIYRAGLLALTRAVQALTPAPGHVLVDARKLPELRLPQTPIIHGDALSL 198 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAK TRD M LD ++P YGF HKGYPTA H + L GA HRRSF PV Sbjct: 199 TIAAASILAKTTRDELMGELDALYPGYGFCNHKGYPTAEHFQALERLGACPIHRRSFQPV 258 Query: 191 KRALGLA 197 + ALGLA Sbjct: 259 REALGLA 265 >UniRef50_C2ESF1 Ribonuclease n=5 Tax=Lactobacillaceae RepID=C2ESF1_9LACO Length = 260 Score = 262 bits (670), Expect = 5e-69, Method: Composition-based stats. Identities = 84/192 (43%), Positives = 114/192 (59%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 ++ Q VAG+DEVGRGPL G VVT AVIL P + G+ DSK+L+ R LY +I Sbjct: 68 QYWQQGCQYVAGMDEVGRGPLAGPVVTCAVILSPEFDLIGVTDSKQLTRHERENLYLQIV 127 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 +A+ S+ + +ID+LNI AT AM +V LH PE +++D P L +P + Sbjct: 128 NEAIEVSIAVNDSQKIDQLNIYAATQNAMMTSVRQLHHQPESLIVDAVPLPALDIPQTTL 187 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD + ++AASI+AK RD M D ++P Y FA++ GY T HL L + GAT Sbjct: 188 IKGDQKSISVAAASIVAKEYRDHLMRDYDRIYPGYDFAENMGYGTKKHLAGLRKLGATPI 247 Query: 183 HRRSFGPVKRAL 194 HRRSF PV L Sbjct: 248 HRRSFNPVPEYL 259 >UniRef50_Q2B7D6 Ribonuclease n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B7D6_9BACI Length = 255 Score = 262 bits (670), Expect = 6e-69, Method: Composition-based stats. Identities = 86/181 (47%), Positives = 114/181 (62%), Gaps = 1/181 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 ++AG DE GRGPL G V+ AAVIL + GL+DSKKLSE +R Y+EI A + + Sbjct: 73 MIAGTDEAGRGPLAGPVIAAAVILPEGFYLPGLDDSKKLSEAKRDEFYKEIMSGASAVGI 132 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 GR EID +NIL A+ AM A+A + P+Y+L D +P A AV+KGDS+ Sbjct: 133 GRISAGEIDRINILQASKKAMLLALADMGSTPDYLLTDAVDL-DVPYQAEAVIKGDSKSV 191 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AAS++AKVTRD M LD +P YGF ++ GY T HLE + +HG HR+SF P+ Sbjct: 192 TIAAASVIAKVTRDRYMRELDEQYPHYGFGRNMGYGTRQHLEAIEKHGIINEHRKSFAPI 251 Query: 191 K 191 K Sbjct: 252 K 252 >UniRef50_B5W7X5 Ribonuclease n=2 Tax=Arthrospira RepID=B5W7X5_SPIMA Length = 223 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 94/187 (50%), Positives = 119/187 (63%), Gaps = 5/187 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIKEKALS 67 VAG+DEVGRG G VV AAV L + AG+ DSKKL+ RL+L I+ KA++ Sbjct: 31 VAGIDEVGRGAWFGPVVAAAVQLSETTILELAAAGVKDSKKLTHNDRLSLSTLIRSKAIA 90 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMAVVKGD 126 +G A EID LNIL AT LAM+R++ L P++ L+DGNR P L +P A+VKGD Sbjct: 91 CQIGWASAREIDRLNILQATQLAMRRSILKLQPPPQFCLVDGNRLIPNLSIPQQAIVKGD 150 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S I+A+SI+AKV RD M LD +PQYGFAQHKGY T H + L +G HHR S Sbjct: 151 SHCVVIAASSIVAKVWRDELMTRLDRTYPQYGFAQHKGYGTKQHKQALQSYGPCFHHRFS 210 Query: 187 FGPVKRA 193 F PV++ Sbjct: 211 FAPVRQY 217 >UniRef50_C4Z936 Ribonuclease n=4 Tax=Clostridiales RepID=C4Z936_EUBR3 Length = 253 Score = 260 bits (664), Expect = 2e-68, Method: Composition-based stats. Identities = 84/185 (45%), Positives = 113/185 (61%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E Y + G+DEVGRGPL G VV AVIL I +NDSKKL+ +R LY+ I Sbjct: 64 EREYASYAHICGIDEVGRGPLAGPVVACAVILPKDCDILYINDSKKLTAAKRDELYDVIM 123 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 EKA+S +G A IDE+NIL AT AM++A+ L AP+ L D P + + + + Sbjct: 124 EKAVSVGIGMASHERIDEINILQATYEAMRQAIGKLDPAPDLTLNDAVTIPGVDIKQVPI 183 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD++ I AASI+AKVTRD M D ++P YGFA +KGY +A H++ L + G + Sbjct: 184 IKGDAKSISIGAASIVAKVTRDRMMVEYDNIYPGYGFASNKGYGSAEHIKALKKIGPSPI 243 Query: 183 HRRSF 187 HR SF Sbjct: 244 HRASF 248 >UniRef50_A6NUN5 Ribonuclease n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUN5_9BACE Length = 210 Score = 258 bits (661), Expect = 7e-68, Method: Composition-based stats. Identities = 89/181 (49%), Positives = 116/181 (64%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 QL+ G DE G GPL G V AVIL + GLNDSKK++ KRR L+EEI+EKA+ Sbjct: 19 RGYQLICGADEAGAGPLAGPVYAGAVILPEGLILEGLNDSKKVTPKRRDRLFEEIQEKAI 78 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 +W++ + EID +NIL+A M AM+ A+ L AP+Y LIDGNR + + VVKGD Sbjct: 79 AWAVASVDEKEIDAINILNARMKAMEMAIQALKPAPDYALIDGNRDKGITIAHETVVKGD 138 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 R I+AASILAKV+RD M + ++P+Y F +HKGY T H E L ++G HRRS Sbjct: 139 GRSANIAAASILAKVSRDRYMEEMAKLYPEYEFERHKGYGTKLHFELLMKYGPCPIHRRS 198 Query: 187 F 187 F Sbjct: 199 F 199 >UniRef50_A0NVD9 Ribonuclease n=2 Tax=Rhodobacteraceae RepID=A0NVD9_9RHOB Length = 228 Score = 258 bits (660), Expect = 7e-68, Method: Composition-based stats. Identities = 101/185 (54%), Positives = 117/185 (63%), Gaps = 2/185 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + GVDE GRGP G VVTAAVILD R GLNDSKKL+E RR L+E+I A SL Sbjct: 44 LCGVDEAGRGPWAGPVVTAAVILDYDRLPDGLNDSKKLTEARREELFEQIVASA-HVSLA 102 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGDSRVP 130 A P ID +NI AT+ AM RAV L + P+YVL+DG P L A++KGD R Sbjct: 103 SASPATIDAVNIRTATLSAMVRAVNHLPLVPDYVLVDGRDVPLGLKQAGQALIKGDGRCL 162 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ++AASI+AKVTRD M LD FP YGFAQHKGY H + L HG T HHR SF PV Sbjct: 163 CVAAASIVAKVTRDRMMVHLDARFPDYGFAQHKGYGVPQHQQALERHGPTVHHRMSFKPV 222 Query: 191 KRALG 195 + A G Sbjct: 223 RLAAG 227 >UniRef50_Q1JGT2 Ribonuclease HII n=78 Tax=Firmicutes RepID=RNH2_STRPD Length = 263 Score = 258 bits (660), Expect = 7e-68, Method: Composition-based stats. Identities = 88/193 (45%), Positives = 117/193 (60%), Gaps = 4/193 (2%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 Q +AG+DEVGRGPL G VV A VIL I GLNDSKK+ + + +Y+ +KE Sbjct: 65 LYKEGYQAIAGIDEVGRGPLAGPVVAACVILPQHCKIKGLNDSKKIPKSKHETIYQAVKE 124 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH---IAPEYVLIDGNRCPKLPMPAM 120 KAL+ +G + IDE+NI AT LAM A+ L P+Y+LID + + Sbjct: 125 KALAIGIGIIDNQLIDEVNIYEATKLAMLEAIKQLEGQLTQPDYLLIDAMTL-DIAISQQ 183 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 +++KGD+ I+AASI+AKVTRD MA D +FP YGFA++ GY T HL+ L +G T Sbjct: 184 SILKGDANSLSIAAASIVAKVTRDQMMANYDRIFPGYGFAKNAGYGTKEHLQGLKAYGIT 243 Query: 181 EHHRRSFGPVKRA 193 HR+SF PVK Sbjct: 244 PIHRKSFEPVKSM 256 >UniRef50_B8FRK8 Ribonuclease HII n=5 Tax=Bacteria RepID=RNH2_DESHD Length = 260 Score = 258 bits (660), Expect = 8e-68, Method: Composition-based stats. Identities = 96/185 (51%), Positives = 128/185 (69%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +AG+DE GRGPL G VV A IL + GLNDSKKL+E +R L+++IKE+A+ +++G Sbjct: 75 IAGIDEAGRGPLAGPVVAATCILPAKFNLPGLNDSKKLTESKREKLFQQIKEQAIGYAVG 134 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 AEP EID LNIL AT LAM+RAV GL + P ++LID P L +P ++ GD+ Sbjct: 135 SAEPAEIDGLNILQATKLAMKRAVEGLKVRPHFLLIDALELPSLKIPQKGIIDGDALSAS 194 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASILAKV+RD M LD ++P+YGFA++KGY T HL L HG + HRRSF PV+ Sbjct: 195 IAAASILAKVSRDHLMGELDKLYPEYGFAKNKGYGTREHLMALRRHGVSPIHRRSFAPVQ 254 Query: 192 RALGL 196 + L + Sbjct: 255 QQLDI 259 >UniRef50_B0SZF7 Ribonuclease HII n=6 Tax=Caulobacteraceae RepID=RNH2_CAUSK Length = 230 Score = 258 bits (660), Expect = 8e-68, Method: Composition-based stats. Identities = 101/185 (54%), Positives = 120/185 (64%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 LV GVDE GRGP G V AAVILDP+R GL+DSKKLS K R L EIK+ A++W + Sbjct: 31 LVCGVDEAGRGPWAGPVSAAAVILDPSRVPKGLDDSKKLSAKARAVLEIEIKQVAVAWCV 90 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A EI+ELNILHA LAM RA+ GL + P+ L+DGN +LP P V+KGDS Sbjct: 91 GLASIEEIEELNILHAAGLAMCRAIDGLSVKPDIALVDGNYRFELPCPIKTVIKGDSLSC 150 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAK RD M +D + P YGFA HKGY A H+E L G + HR S+ PV Sbjct: 151 SIAAASILAKEARDRIMVEMDALHPGYGFASHKGYHAAIHVEGLRRLGPSPIHRLSWAPV 210 Query: 191 KRALG 195 K AL Sbjct: 211 KLALA 215 >UniRef50_A7HQZ3 Ribonuclease HII n=43 Tax=Bacteria RepID=RNH2_PARL1 Length = 269 Score = 258 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 103/188 (54%), Positives = 119/188 (63%), Gaps = 2/188 (1%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 +LV GVDE GRGPL G VV AAVI+D R GLNDSKKL RR L E+ + A Sbjct: 60 ARLVCGVDEAGRGPLAGPVVAAAVIIDLTRCPEGLNDSKKLDAARRADLLAELADCA-EI 118 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDS 127 +G A EIDE+NILHATMLAM RAVA L AP LIDGNRCP L + AV+ GD+ Sbjct: 119 GVGIASVEEIDEINILHATMLAMTRAVASLPRAPHIALIDGNRCPPSLACASRAVIGGDA 178 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASI+AKVTRD MAAL P YGF +H GY T H + L+ G HRRSF Sbjct: 179 LARSIAAASIVAKVTRDRMMAALAETHPGYGFEKHMGYSTPEHFDALSRLGPCAIHRRSF 238 Query: 188 GPVKRALG 195 PV++ L Sbjct: 239 APVRKMLS 246 >UniRef50_Q3AC76 Ribonuclease HII n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RNH2_CARHZ Length = 231 Score = 258 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 80/193 (41%), Positives = 106/193 (54%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + +LVAG DE GRGP+ G VV A V++ P I ++DSKKLS K+R L+EEI Sbjct: 31 QLFSSGYELVAGGDEAGRGPVAGPVVAAIVVIKPGIYIPEVDDSKKLSSKKREKLFEEII 90 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 WS+ P ID LNI AT A + A+ L I PE +++D + +++ Sbjct: 91 NLVTDWSVAVVGPDLIDRLNIYQATKFAFKAALDSLSIKPEALILDALKLTGFSGKQVSM 150 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VK D ++ ASILAKV RD M D FP YGF ++KGY T H E L G + Sbjct: 151 VKADEISFAVACASILAKVIRDKIMEQYDKDFPGYGFKKNKGYLTREHREALELLGPSPI 210 Query: 183 HRRSFGPVKRALG 195 HR+SF P+K G Sbjct: 211 HRKSFEPIKSFYG 223 >UniRef50_C6QIW2 Ribonuclease n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QIW2_9RHIZ Length = 231 Score = 257 bits (658), Expect = 1e-67, Method: Composition-based stats. Identities = 93/189 (49%), Positives = 121/189 (64%), Gaps = 1/189 (0%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 ++ +AGVDE GRGP G VV AAVILDP + A ++DSK L E R LY I + A+ Sbjct: 22 GSRPIAGVDEAGRGPWAGPVVAAAVILDPDKIPANIDDSKTLDEDSRAFLYRRIMKVAI- 80 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 +G A+ ID NIL AT+ AM AV+ L P+ VL+DG++ P++PM A+VKGDS Sbjct: 81 VGVGIADVDRIDRENILGATLWAMAEAVSQLGETPKLVLVDGDKTPRIPMSVRAIVKGDS 140 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + I+AASI+AKVTRD M +P YGF +HKGY T H +A+ G + HRRSF Sbjct: 141 KCLSIAAASIVAKVTRDRLMMDFARAYPGYGFERHKGYGTPEHQAAIAKLGVSALHRRSF 200 Query: 188 GPVKRALGL 196 PV+ ALGL Sbjct: 201 RPVQLALGL 209 >UniRef50_Q0AWX1 Ribonuclease HII n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RNH2_SYNWW Length = 255 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 87/188 (46%), Positives = 117/188 (62%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 + +AG+DE GRGP+ G V+ AAVIL G+NDSKKL+ +R L EIK++A+ Sbjct: 55 NGFRYIAGIDEAGRGPIAGPVMAAAVILSRDFFCPGINDSKKLTALKRSKLAAEIKKQAI 114 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 SWS+ P +D++NIL+AT AM AV L PE++LID + P + + ++KGD Sbjct: 115 SWSVAAVFPSYLDKVNILNATREAMLLAVKNLSPRPEFLLIDAVQLPDIDIKQYPLIKGD 174 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S I+AASILAKV RD M A D ++P YGF++HKGY T HL+ L G HR S Sbjct: 175 SLSVSIAAASILAKVERDRVMEAFDSLYPGYGFSRHKGYATREHLQSLLRLGTCALHRVS 234 Query: 187 FGPVKRAL 194 F PVK + Sbjct: 235 FEPVKSMV 242 >UniRef50_B5YFD2 Ribonuclease n=2 Tax=Dictyoglomus RepID=B5YFD2_DICT6 Length = 203 Score = 256 bits (656), Expect = 2e-67, Method: Composition-based stats. Identities = 91/185 (49%), Positives = 119/185 (64%), Gaps = 2/185 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 ++ + + +AGVDE GRG L G V + AVIL P I +NDSK L+ + R L+E IK++ Sbjct: 18 LWYYFKYIAGVDEAGRGALAGPVYSGAVILPPFSSIP-VNDSKLLTPREREELFEIIKKE 76 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN-RCPKLPMPAMAVV 123 +L WS G A EI++ IL AT LAM+RAV GL I PEY+LIDGN P + +P VV Sbjct: 77 SLCWSFGYATVEEIEKFGILQATFLAMKRAVEGLEIKPEYLLIDGNIPIPDIDIPQETVV 136 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGD R I++ASI+AKV RD M LD +P+YGF +HKGY T H EK+ + G H Sbjct: 137 KGDRRCLSIASASIVAKVLRDKYMKELDKEYPEYGFGKHKGYATKEHREKIKDLGTLVIH 196 Query: 184 RRSFG 188 R+ F Sbjct: 197 RKGFK 201 >UniRef50_D1C7S7 Ribonuclease n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7S7_SPHTD Length = 233 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 100/196 (51%), Positives = 122/196 (62%), Gaps = 3/196 (1%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA-RPIAGLNDSKKLSEKRRLALYEEI 61 E +LVAGVDEVGRG + G VV AA IL P I G+ DSK LS ++R L EEI Sbjct: 32 ELWARGLRLVAGVDEVGRGCVAGPVVAAACILPPGIEDIPGVRDSKTLSARQRERLAEEI 91 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL-PMPAM 120 + AL LG A EID+ NI A+ LAM+RA+A L A ++VL DG P+L P M Sbjct: 92 RRVALGIGLGAASRREIDQYNIRQASALAMRRALARLG-AWDFVLYDGRPLPELDPERTM 150 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 AVVKGD+ I+ ASILAKVTRDA MA L P+YG+ ++ GY TA HL+ L G T Sbjct: 151 AVVKGDASCLSIACASILAKVTRDALMARLARRHPEYGWERNAGYGTAEHLDALLRVGPT 210 Query: 181 EHHRRSFGPVKRALGL 196 HHRR+F PV+ L Sbjct: 211 PHHRRTFAPVRDLLAA 226 >UniRef50_B9M597 Ribonuclease HII n=3 Tax=Deltaproteobacteria RepID=RNH2_GEOSF Length = 216 Score = 256 bits (655), Expect = 3e-67, Method: Composition-based stats. Identities = 87/198 (43%), Positives = 119/198 (60%), Gaps = 4/198 (2%) Query: 1 MIEFVY----PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLA 56 ++EF +AGVDE GRGPL G VV AAVIL ++ ++DSKKL+ +R Sbjct: 14 LLEFDSMVRCQGYASLAGVDEAGRGPLAGPVVAAAVILPAGIGLSEVDDSKKLTSGKRDE 73 Query: 57 LYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP 116 L+E I AL+ +G ++ ID +NIL AT+ AM+ A++ L I P+YVL+DG + Sbjct: 74 LFEVIMANALAVGVGLSDAGVIDRINILQATLAAMKEALSLLFIKPDYVLVDGISKIPVT 133 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 +P + KGD I+AASI+AKV RD M + D FPQYGFA HKGY HL+ +AE Sbjct: 134 IPQKTIKKGDGTSLSIAAASIVAKVHRDRLMVSYDAEFPQYGFAAHKGYGCVDHLKAIAE 193 Query: 177 HGATEHHRRSFGPVKRAL 194 +G HR +F VK + Sbjct: 194 YGPCPIHRMTFSGVKEHV 211 >UniRef50_D2MIZ6 Ribonuclease HII n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIZ6_9BACT Length = 216 Score = 256 bits (654), Expect = 4e-67, Method: Composition-based stats. Identities = 90/192 (46%), Positives = 115/192 (59%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E + VAG+DE GRGPL G VV AAVI+ + L+DSKK+S R AL+ I Sbjct: 20 EARTRGYRRVAGLDEAGRGPLAGPVVGAAVIVPRRFSLRSLDDSKKVSPTEREALFSVIT 79 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E A +W +G A EID LN+L AT LA QRA+ L I P+++L+DG+ + +P +V Sbjct: 80 ESATAWGIGVASEAEIDSLNVLRATWLAWQRAINQLRIPPDFLLVDGHLGADVFIPHRSV 139 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 + GD I+AASILAKV RD M P+Y F HKGYPT HL L + G + Sbjct: 140 IHGDRLSSSIAAASILAKVFRDRIMCEYHERDPRYRFHIHKGYPTPEHLRLLRQFGPSPV 199 Query: 183 HRRSFGPVKRAL 194 HR SFGPV+R L Sbjct: 200 HRHSFGPVRRCL 211 >UniRef50_A8SF05 Ribonuclease n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF05_9FIRM Length = 215 Score = 255 bits (653), Expect = 5e-67, Method: Composition-based stats. Identities = 99/178 (55%), Positives = 121/178 (67%), Gaps = 1/178 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 AGVDE GRGPL G V AA ILDP P+ G+NDSKKL+EK+R AL++EI EKAL++ + Sbjct: 26 CFAGVDEAGRGPLCGPVCVAACILDPENPVYGINDSKKLTEKKREALFDEICEKALAYRI 85 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGDSRV 129 P ID NIL+ATM MQ+AV L I P VL+DGNR P L +PA VVKGD+ Sbjct: 86 IFVGPEVIDRENILNATMGGMQQAVEELDIVPNLVLVDGNRTPAGLQIPAQPVVKGDATS 145 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I AAS+LAKV+RD M LD +PQY A+HKGYPT H E +A++G +RRSF Sbjct: 146 ASIGAASVLAKVSRDRYMLELDKQYPQYQLAKHKGYPTKLHYELIAQYGIQPFYRRSF 203 >UniRef50_Q73G60 Ribonuclease HII n=9 Tax=Rickettsiales RepID=RNH2_WOLPM Length = 198 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 87/185 (47%), Positives = 122/185 (65%), Gaps = 2/185 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVIL-DPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 ++AGVDEVGRGPL G V++AAV+ D I G+NDSKKL+ + R LYE+I A + Sbjct: 15 VIAGVDEVGRGPLAGPVISAAVVFIDRNTIIDGINDSKKLTPQCRQVLYEKITSVA-KFG 73 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 +G A EI+ NIL AT L+M+RA+ L + +YVL+DGN+ P++ ++V GD+ Sbjct: 74 IGMASVEEINSYNILQATKLSMKRALIDLDLELDYVLVDGNQPPEVKWQVKSIVNGDNLS 133 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AASI+AKVTRD M L P+Y + ++KGY T HL + +G TEHHR++F P Sbjct: 134 TSIAAASIVAKVTRDRLMQELHNKHPEYNWYKNKGYGTKEHLNAIGLYGITEHHRKNFAP 193 Query: 190 VKRAL 194 + RAL Sbjct: 194 ISRAL 198 >UniRef50_Q1GD84 Ribonuclease HII n=22 Tax=Alphaproteobacteria RepID=RNH2_SILST Length = 229 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 101/189 (53%), Positives = 123/189 (65%), Gaps = 2/189 (1%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 +AGVDEVGRGPL G V AAV+LD A GLNDSKKL+ +RR AL EI +A Sbjct: 39 RGYTRIAGVDEVGRGPLAGPVTAAAVVLDLADLPEGLNDSKKLTPRRRAALEPEIMARA- 97 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKG 125 S+++ A EID NIL A+ LAM+RAVA L P+Y+LIDGN P+ L +PA AVVKG Sbjct: 98 SYAVAHASVEEIDHHNILRASHLAMERAVAALDPQPDYLLIDGNLIPRALHIPAEAVVKG 157 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D R I+AASILAK RD M L FP YG+ ++ GYP+ H + L + G T HHRR Sbjct: 158 DGRSLSIAAASILAKEARDRIMVDLAQQFPGYGWERNAGYPSKQHRDALIKIGVTPHHRR 217 Query: 186 SFGPVKRAL 194 SF PV + L Sbjct: 218 SFKPVHKIL 226 >UniRef50_Q49X31 Ribonuclease HII n=55 Tax=Staphylococcus RepID=RNH2_STAS1 Length = 256 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 79/185 (42%), Positives = 114/185 (61%), Gaps = 1/185 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L+ G+DEVGRGPL G VVT AVIL+ GLNDSKKLS K+R ++ ++ +++ Sbjct: 73 LICGIDEVGRGPLAGPVVTCAVILNKNHHFTGLNDSKKLSAKQRHSIESKLLNDVYAYAY 132 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A EIDE+NI AT LAM RA+ GL I P ++L+D + +P +++KGD++ Sbjct: 133 GYASVEEIDEINIYEATKLAMHRAIEGLRIKPTHLLVDAMTL-DIDIPQTSLIKGDAKSV 191 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AAS+LAK RD M L +P Y F + GY T HL+ + ++G HR++F P+ Sbjct: 192 SIAAASVLAKEHRDQYMRDLGRKYPGYSFENNVGYGTQQHLDGIKKYGILNEHRKTFEPI 251 Query: 191 KRALG 195 K + Sbjct: 252 KSLVN 256 >UniRef50_A5D1I3 Ribonuclease HII n=4 Tax=Bacteria RepID=RNH2_PELTS Length = 266 Score = 254 bits (649), Expect = 1e-66, Method: Composition-based stats. Identities = 91/192 (47%), Positives = 114/192 (59%), Gaps = 2/192 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP--ARPIAGLNDSKKLSEKRRLALYEEI 61 + VAGVDE GRGPL G VV AAVIL P +AGLNDSKKL+ +R L I Sbjct: 67 LIAQGYSPVAGVDEAGRGPLAGPVVAAAVILPPVADLALAGLNDSKKLNPSKRAELAARI 126 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 K+ AL+WS G + EI NI A++ AM+RAV L I P Y+L+DG R +L +P +A Sbjct: 127 KKVALAWSAGISTVEEIFNENIHAASLTAMRRAVLKLKIRPAYLLVDGYRISRLELPQLA 186 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 + GD ++AASILAKV RD M + +PQYGF +HKGY T HL L +G Sbjct: 187 LTGGDGLSASVAAASILAKVLRDRLMDFYHVQYPQYGFNRHKGYATPEHLAALERYGPCP 246 Query: 182 HHRRSFGPVKRA 193 HR + PVK Sbjct: 247 LHRAGYRPVKNC 258 >UniRef50_D1Q046 Ribonuclease n=2 Tax=Prevotella RepID=D1Q046_9BACT Length = 226 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 116/211 (54%), Gaps = 23/211 (10%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 M++ Y + AG DE GRG L G+V AAVIL NDSK+LS+K+R AL E+ Sbjct: 1 MLQNSYNPHLIEAGCDEAGRGCLAGSVFAAAVILPKDYDNPDFNDSKQLSKKKRYALREQ 60 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP---- 116 I A++W++G P EID +NILHA+ LAM RA+ L + PE ++IDGNR Sbjct: 61 IIRDAVAWAVGIVTPAEIDRINILHASFLAMHRAIDQLAVRPEALIIDGNRFDPYKPLSE 120 Query: 117 -------------------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQY 157 +P +VKGD + I+AASILAK RD M L + +P Y Sbjct: 121 NATEGRKERVVTRPDDPAVLPWQCIVKGDGKYQNIAAASILAKTFRDDYMDELHLQYPMY 180 Query: 158 GFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 + +KGYPT H E +A +G T HR+S+ Sbjct: 181 HWNSNKGYPTRIHREAIARYGITPFHRKSYN 211 >UniRef50_A5FIL7 Ribonuclease HII n=4 Tax=Flavobacteriales RepID=RNH2_FLAJ1 Length = 221 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 87/217 (40%), Positives = 117/217 (53%), Gaps = 21/217 (9%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 M++ Y L G DE GRG L G V AAVIL LNDSK+LSEK R L Sbjct: 1 MLQLNYSGFTLETGTDEAGRGCLAGPVTAAAVILPSVFENNILNDSKQLSEKARALLKPI 60 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP---- 116 I+E+AL +S+ P EIDE+NIL+A+M MQ + L PEY+++DGNR Sbjct: 61 IEEQALCFSVTHLFPDEIDEINILNASMKGMQECILKLKHIPEYIIVDGNRSLNAKLGLK 120 Query: 117 -----------------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGF 159 +P +++KGD++ I+AASILAK RD M + FP Y + Sbjct: 121 NTFGKQFSKEEIELLKSIPNQSIIKGDAKFLSIAAASILAKTYRDEYMDQIHEEFPMYNW 180 Query: 160 AQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGL 196 Q+KGYPT H E + ++G T++HR SF + L L Sbjct: 181 KQNKGYPTKEHREAIKKYGTTKYHRMSFRLLPDQLEL 217 >UniRef50_B9EBC6 Ribonuclease HII n=3 Tax=Staphylococcaceae RepID=RNH2_MACCJ Length = 264 Score = 253 bits (646), Expect = 3e-66, Method: Composition-based stats. Identities = 80/195 (41%), Positives = 124/195 (63%), Gaps = 3/195 (1%) Query: 1 MIEFVYP-HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYE 59 M+E+ + ++V G+DEVGRGPL G V+ AVIL+ GLNDSK+LS+ +R +LY+ Sbjct: 59 MLEYERRYNGKVVCGIDEVGRGPLAGPVIACAVILNDGHHYIGLNDSKQLSKHKRASLYD 118 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPA 119 + + ++++++G A EID+ NI AT LAM RA+ L + P+ +LID + Sbjct: 119 ALTQ-SVTYAIGAASVEEIDKFNIYEATKLAMHRAIDKLPVKPDVLLIDAMNL-NTGLIE 176 Query: 120 MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA 179 +++KGD++ I+AAS++AKV RD M + FP Y F ++ GY T HL+ L ++G Sbjct: 177 ESIIKGDAKSVSIAAASVIAKVYRDHLMEEIHEEFPYYDFNRNAGYGTKRHLDGLMQYGI 236 Query: 180 TEHHRRSFGPVKRAL 194 T HHR+SF P+K + Sbjct: 237 TAHHRKSFEPIKSMI 251 >UniRef50_C4XFT1 Ribonuclease n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XFT1_MYCFE Length = 217 Score = 252 bits (645), Expect = 4e-66, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 107/190 (56%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 YP T+L+ G+DE GRG G +V VI+ + DSK+LS+K+R E I E A Sbjct: 28 YPDTKLIVGLDEAGRGCCAGPLVVGCVIMPQNFNHPLIKDSKQLSQKQREEALEIILENA 87 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 + E+D+LN A+ + MQR + L+ PE V+ D + + +P + +VKG Sbjct: 88 IETVTTIINAQEVDQLNPKQASRIGMQRCINKLNTKPELVITDFEKINDINIPQINLVKG 147 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D ++AASILAKVTRD M +D FP Y F ++KGY T H ++++G E HR+ Sbjct: 148 DQLSINVAAASILAKVTRDLIMVGIDKKFPMYNFKKNKGYCTKEHEAAMSQYGICEFHRK 207 Query: 186 SFGPVKRALG 195 S+ VK+ L Sbjct: 208 SYKNVKKYLN 217 >UniRef50_Q0AEI5 Ribonuclease HII n=2 Tax=Nitrosomonas RepID=RNH2_NITEC Length = 219 Score = 252 bits (645), Expect = 5e-66, Method: Composition-based stats. Identities = 99/191 (51%), Positives = 127/191 (66%), Gaps = 1/191 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E+++P + + GVDE GRGPL G V A V+LD I GL DSK+LSEKRR +L E+IK Sbjct: 25 EWIHPEGKAIYGVDEAGRGPLAGPVYAACVVLDSCYVINGLADSKQLSEKRRASLAEQIK 84 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL-HIAPEYVLIDGNRCPKLPMPAMA 121 + A +W++ A EID LNIL A+MLAM+RAV L ++ +L+DG P+L A Sbjct: 85 QHARAWAIASASVEEIDRLNILQASMLAMRRAVIELMPVSNALILVDGTHVPQLDYEVQA 144 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 V++GDS V EISAASILAK RDAEM L ++P YGF +HKGYPT HL+ + HG T Sbjct: 145 VIRGDSLVAEISAASILAKTARDAEMLRLHEIYPIYGFDRHKGYPTRVHLDAIRLHGITA 204 Query: 182 HHRRSFGPVKR 192 HR+SF P Sbjct: 205 THRKSFAPCAE 215 >UniRef50_B9XLY3 Ribonuclease n=1 Tax=bacterium Ellin514 RepID=B9XLY3_9BACT Length = 245 Score = 252 bits (644), Expect = 5e-66, Method: Composition-based stats. Identities = 80/200 (40%), Positives = 108/200 (54%), Gaps = 8/200 (4%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA-------RPIAGLNDSKKLSEKRRL 55 E T LVAGVDE G GPL G VV AAV+ + + GLNDSK+L E +R Sbjct: 16 ELWQQGTTLVAGVDEAGCGPLAGPVVAAAVLFPCSWLEAGLFSKLRGLNDSKQLDEDQRE 75 Query: 56 ALYEEIKEKA-LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK 114 Y I + ++ + ID +NI A M +A+ L+ P++VL+DG + Sbjct: 76 KFYNIIVNHPEIRHAIAVIDVEMIDRINIRQAAWRGMNQALDQLNPKPQHVLVDGLKIKW 135 Query: 115 LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKL 174 LP A+V+GD + I+AAS+LAKVTRD M D +P YGFA+HKGY T HL + Sbjct: 136 LPYAQTALVQGDGKSYSIAAASVLAKVTRDRLMQDYDKQYPGYGFAEHKGYGTPKHLAAI 195 Query: 175 AEHGATEHHRRSFGPVKRAL 194 G HR+SF P + + Sbjct: 196 NAQGPCLIHRKSFAPFRPIM 215 >UniRef50_A5UX01 Ribonuclease HII n=8 Tax=Chloroflexi RepID=RNH2_ROSS1 Length = 227 Score = 251 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 90/193 (46%), Positives = 115/193 (59%), Gaps = 5/193 (2%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPA-----RPIAGLNDSKKLSEKRRLALYEEIK 62 + +AG+DE GRG L G VV AAVIL A + G+ DSK LS +R L+E I Sbjct: 18 GYRAIAGLDEAGRGCLAGPVVAAAVILPDAVIDTPDVLDGVADSKMLSPAQRADLFERIT 77 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 A++W++G H ID IL AT LAMQ A+ L + +LID P+P A+ Sbjct: 78 SLAVAWAVGATPAHIIDSHGILPATRLAMQVALLRLPRPADALLIDAVTLDNWPLPQRAL 137 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD+R I+AASI+AKVTRD M ALD +PQYGFA HKGY T H + L +G T H Sbjct: 138 IKGDARCLSIAAASIIAKVTRDRLMDALDACWPQYGFASHKGYGTVQHQQALRRYGPTPH 197 Query: 183 HRRSFGPVKRALG 195 HRR+F P+ L Sbjct: 198 HRRTFRPLCDWLA 210 >UniRef50_A6GPG3 Ribonuclease n=1 Tax=Limnobacter sp. MED105 RepID=A6GPG3_9BURK Length = 218 Score = 251 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 97/201 (48%), Positives = 121/201 (60%), Gaps = 6/201 (2%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + H+ V GVDE GRGPL G VV A +L+ I GL SK LS K+R +L I+ Sbjct: 13 YAEQHSLQVIGVDEAGRGPLCGPVVAGAALLNQPNTIDGLACSKTLSAKKRDSLETAIRR 72 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVA------GLHIAPEYVLIDGNRCPKLPM 117 A + ++ A EID LNIL A++LAM RAV GL + +DGN+ PK P Sbjct: 73 NAKACAVAHATVEEIDRLNILQASLLAMWRAVDLVLDQTGLKPKQCLIAVDGNKLPKWPY 132 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 A+AVVKGD+++P ISAASILAKV RD + FPQY H GYPTA H+ L EH Sbjct: 133 QAIAVVKGDTKIPAISAASILAKVARDEWCKTHALQFPQYELDIHMGYPTARHMALLLEH 192 Query: 178 GATEHHRRSFGPVKRALGLAS 198 GAT+ HR+SF PV+ AL A Sbjct: 193 GATQLHRKSFRPVREALERAQ 213 >UniRef50_B9DPH3 Ribonuclease HII n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=RNH2_STACT Length = 261 Score = 250 bits (639), Expect = 2e-65, Method: Composition-based stats. Identities = 81/184 (44%), Positives = 111/184 (60%), Gaps = 1/184 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 ++ G+DEVGRGPL G VV AVIL+ GL+DSKK+S R L E + EK +++ Sbjct: 73 VICGIDEVGRGPLAGPVVACAVILNADHAYYGLDDSKKVSAANRQKLSEALIEKTTAYAY 132 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A P EID+LNI AT +AM RA+ L++ P ++LID P L + +++KGD++ Sbjct: 133 GIATPEEIDDLNIYQATQVAMMRAIENLNVTPTHLLIDAMELP-LDIAQTSIIKGDAKSV 191 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAK RD M L +P Y F + GY T HLE + G HR+SF P+ Sbjct: 192 SIAAASILAKEHRDTYMRQLAEQYPGYDFEHNVGYGTKAHLEGIKRLGIIPEHRKSFEPI 251 Query: 191 KRAL 194 K + Sbjct: 252 KSIV 255 >UniRef50_C7NAV4 Ribonuclease n=5 Tax=Fusobacteriaceae RepID=C7NAV4_LEPBD Length = 214 Score = 250 bits (639), Expect = 2e-65, Method: Composition-based stats. Identities = 87/199 (43%), Positives = 123/199 (61%), Gaps = 7/199 (3%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYE 59 ++EF + ++V GVDE GRGPL G VV AVI+ P + +NDSKKL+EK+R L+E Sbjct: 13 LMEFDEKYNKIVVGVDEAGRGPLAGPVVAGAVIVIQDFPELQEINDSKKLTEKKRERLFE 72 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP--EYVLIDGNRC-PKLP 116 I++ + +G A EIDE+NIL+AT LAM+RA+ + + VL+DGN + Sbjct: 73 AIEKNCI-VGIGIASEKEIDEMNILNATFLAMRRAINQVAEKSAFDIVLVDGNHLIREYE 131 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 +VKGDS+ I+ ASI+AKVTRD + + FP+Y F +HKGY T H E L E Sbjct: 132 GEQECIVKGDSKSLAIATASIVAKVTRDRMLCEIAKEFPEYQFEKHKGYGTKKHREILLE 191 Query: 177 HGATEHHRRSFGPVKRALG 195 GA +HR++F +K+ L Sbjct: 192 KGACRYHRKTF--LKKILD 208 >UniRef50_A4J661 Ribonuclease HII n=2 Tax=Clostridia RepID=RNH2_DESRM Length = 198 Score = 250 bits (639), Expect = 2e-65, Method: Composition-based stats. Identities = 92/184 (50%), Positives = 122/184 (66%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L GVDE GRG + + +A ILDPA PI GL DSKKLS ++R L EEIK+ ALSW + Sbjct: 3 LECGVDETGRGSCISGIYASACILDPAHPIEGLRDSKKLSARKREILAEEIKQYALSWCI 62 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 +A E+++LN+ HAT+LAM+RA+ GL I V +DG P++ +PA A+VKGD +P Sbjct: 63 AQASLEEVEQLNVHHATLLAMKRAIEGLSIRANKVYVDGIHLPEVDIPAEAIVKGDDLIP 122 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ISAASILAKV RD M +PQYGF HKGY T H E L ++G + HR+++ P+ Sbjct: 123 AISAASILAKVARDGAMLEYHEKYPQYGFNSHKGYLTKAHREALKKYGPSPIHRKTYAPI 182 Query: 191 KRAL 194 + L Sbjct: 183 RELL 186 >UniRef50_A8VRY1 Ribonuclease n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRY1_9BACI Length = 258 Score = 249 bits (636), Expect = 5e-65, Method: Composition-based stats. Identities = 91/187 (48%), Positives = 119/187 (63%), Gaps = 3/187 (1%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 +L+AGVDEVGRGPL G V A VIL + + GL DSKKLSE +R EI++ A++ Sbjct: 67 GYRLIAGVDEVGRGPLAGPVTAACVILPESPDLKGLTDSKKLSEAKRHFYAAEIQKVAIA 126 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGL--HIAPEYVLIDGNRCPKLPMPAMAVVKG 125 G A P EID LNI A+ LAM+RAVA + A +++LID P + +P +++KG Sbjct: 127 AETGEASPEEIDRLNIYEASKLAMRRAVAAVQQKTAIDFLLIDAMTLP-IDLPQESLIKG 185 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D+R I+AAS++AKV RD +M LD FP+YG A H GY T HL L EHG HR+ Sbjct: 186 DARSLSIAAASVIAKVERDNQMKELDRAFPEYGLASHMGYGTREHLAALDEHGPQFFHRK 245 Query: 186 SFGPVKR 192 SF PV+ Sbjct: 246 SFSPVRE 252 >UniRef50_Q5NNT2 Ribonuclease HII n=5 Tax=Alphaproteobacteria RepID=RNH2_ZYMMO Length = 215 Score = 249 bits (636), Expect = 5e-65, Method: Composition-based stats. Identities = 81/186 (43%), Positives = 113/186 (60%), Gaps = 5/186 (2%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 +V GVDEVGRGPL G V+ AV L G+NDSKKL+ +RR L + + +A ++ Sbjct: 25 VVFGVDEVGRGPLAGPVMAGAVYLHREHIPEGINDSKKLTARRRHLLSDMLHNQA-DYAT 83 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGL----HIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 G A+ HEID +NI A++LAM+RAV L P+ +L+DG P P P++ ++KGD Sbjct: 84 GMADVHEIDRINIRQASLLAMKRAVEALIQKIGREPDCILVDGRDIPDWPWPSLPIIKGD 143 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S I+AASI+AKV RD M +P YG+ + GYPT H E + T+ HRRS Sbjct: 144 SLSLSIAAASIVAKVERDEIMVKASQEYPGYGWEHNMGYPTKEHREAIQRLKPTKFHRRS 203 Query: 187 FGPVKR 192 F P+++ Sbjct: 204 FSPIRQ 209 >UniRef50_Q4FPF7 Ribonuclease HII n=3 Tax=Bacteria RepID=RNH2_PELUB Length = 186 Score = 249 bits (636), Expect = 5e-65, Method: Composition-based stats. Identities = 84/186 (45%), Positives = 124/186 (66%), Gaps = 2/186 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +++AGVDEVGRG L+G V AAVIL+ + L DSK L++ +R L + IK+ ++ W+ Sbjct: 2 KILAGVDEVGRGSLIGPVYAAAVILNNSIDKKLLKDSKTLTKDKREELEKYIKKNSI-WA 60 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP-MPAMAVVKGDSR 128 +G+A EI+++NILHA++LAM+RA+ L I P VLIDGN+ P L V+KGD + Sbjct: 61 IGQASTKEIEKINILHASLLAMKRAILKLKIKPSLVLIDGNKLPDLKNYKLEYVIKGDQK 120 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +P ISAASI+AKV+RD + L F YG+ + GY T HL+ + + G T++HR++F Sbjct: 121 IPSISAASIIAKVSRDKFITKLSKEFNNYGWDTNSGYGTKEHLKAIKQFGITKYHRKTFS 180 Query: 189 PVKRAL 194 P+ L Sbjct: 181 PISDLL 186 >UniRef50_C8WWC4 Ribonuclease n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWC4_ALIAD Length = 216 Score = 249 bits (636), Expect = 5e-65, Method: Composition-based stats. Identities = 88/187 (47%), Positives = 116/187 (62%), Gaps = 4/187 (2%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARP----IAGLNDSKKLSEKRRLALYEEIKEKALSW 68 AGVDEVGRG + G VV A+V+L R + + DSK+L R L + I+ KAL+ Sbjct: 21 AGVDEVGRGCIAGPVVAASVVLPLERETYEELKDVMDSKQLKPDVRERLADRIRAKALAV 80 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 +G A P EID LNIL AT LAM+R++ L I + L+DGNR + +P + VV GD+R Sbjct: 81 GIGMASPEEIDRLNILQATQLAMKRSLDALDIPVDLALVDGNRGFRHRVPVLPVVDGDAR 140 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 ++AAS++AKV RD MA LD FP YGF++H GY T HLE L G + HR SF Sbjct: 141 SLLVAAASVIAKVFRDRLMAKLDEGFPGYGFSEHVGYGTRAHLEALRRLGPSVVHRLSFA 200 Query: 189 PVKRALG 195 PV+ +G Sbjct: 201 PVRACVG 207 >UniRef50_Q2P4B9 Ribonuclease HII n=19 Tax=cellular organisms RepID=RNH2_XANOM Length = 246 Score = 248 bits (635), Expect = 6e-65, Method: Composition-based stats. Identities = 100/186 (53%), Positives = 121/186 (65%), Gaps = 2/186 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 LVAGVDE GRGPL G V AAV+ DP +P I GL+DSK+L+ +RR LY I ++AL+WS Sbjct: 36 LVAGVDEAGRGPLAGPVAVAAVVFDPNKPRINGLDDSKQLTAERREQLYARIVDRALAWS 95 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSR 128 + + EID +NI ATML M+RAV G+ + IDGNR PK LP PA A++ GD+ Sbjct: 96 VVLIDSEEIDRINIYQATMLGMRRAVEGVAHVAGFARIDGNRVPKGLPCPAEALIGGDAL 155 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I AASI+AKVTRD M L P+Y F QHKGY T HL L HG HRRSF Sbjct: 156 DRAIMAASIVAKVTRDRLMHELHAQHPEYRFDQHKGYSTPMHLAALQTHGPCPQHRRSFA 215 Query: 189 PVKRAL 194 PV+ AL Sbjct: 216 PVRLAL 221 >UniRef50_Q024M2 Ribonuclease HII n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RNH2_SOLUE Length = 228 Score = 248 bits (635), Expect = 6e-65, Method: Composition-based stats. Identities = 90/189 (47%), Positives = 118/189 (62%), Gaps = 1/189 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E + VAGVDEVGRG L GAV AVIL RPI GLNDSK+L +RR L I+ Sbjct: 19 ELRARGFRAVAGVDEVGRGALFGAVFAGAVILSEERPIRGLNDSKQLDPERREVLAGRIR 78 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E+A++WS+ + ID +NI A+ +AM+ AV+ L AP+++L+D + +P A+ Sbjct: 79 ERAVAWSIAAVDASTIDSINIYQASRMAMRIAVSRLSPAPDFLLVDAVPL-EFAVPQRAL 137 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD R I+AASILAKV RD M D VFP+YG A HKGY T H + ++G T Sbjct: 138 IKGDERCHAIAAASILAKVARDECMRVWDKVFPEYGLASHKGYSTPEHYRAIEQYGPTPL 197 Query: 183 HRRSFGPVK 191 HR SF PV+ Sbjct: 198 HRLSFEPVR 206 >UniRef50_Q2JW45 Ribonuclease HII n=5 Tax=Cyanobacteria RepID=RNH2_SYNJA Length = 221 Score = 248 bits (634), Expect = 8e-65, Method: Composition-based stats. Identities = 82/190 (43%), Positives = 109/190 (57%), Gaps = 4/190 (2%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP---IAGLNDSKKLSEKRRLALYEEIK 62 + VAGVDEVGRG L G VV AAVIL ++G+ D K+L +R E I Sbjct: 25 QQGMRRVAGVDEVGRGALAGPVVAAAVILPAHLDPEALSGVRDCKQLRPPQRAHWAERIA 84 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 + AL+ +G A EID+LNI AT+LAMQRA+A + E++L+DG +L A+ Sbjct: 85 QVALAVGIGSASAAEIDQLNIRQATLLAMQRALAQVG-EVEHILLDGLPLAELGSRQTAL 143 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD I+AASI+AKV RD M + D +P YG+ + GY T H L G + Sbjct: 144 VKGDQLSLSIAAASIVAKVWRDTLMQSWDHQYPGYGWRTNVGYGTQEHRLALQRLGPSPQ 203 Query: 183 HRRSFGPVKR 192 HRRSF P++ Sbjct: 204 HRRSFAPLRD 213 >UniRef50_Q3Z8D7 Ribonuclease HII n=2 Tax=Dehalococcoides RepID=RNH2_DEHE1 Length = 211 Score = 248 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 77/193 (39%), Positives = 115/193 (59%), Gaps = 3/193 (1%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDP---ARPIAGLNDSKKLSEKRRLALYEEIKE 63 +AG+DE GRG L G VV AVI+ P +A + DSK L+ ++R LY I Sbjct: 18 QGFSSIAGLDEAGRGCLAGPVVAGAVIMPPRLKGDWVAMVRDSKVLTPEKREYLYCHIVS 77 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 A+S+ +G + +ID L I AT LAM++AV L P+++L+D + P +P+P +V Sbjct: 78 MAISFGVGVVDNTQIDCLGIAPATRLAMKQAVEHLDCRPDFLLVDYLKLPDIPLPQKGIV 137 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD+ I+ ASI+AKV+RD M L+ +P Y A+HKGY TA H+E +++ G + H Sbjct: 138 DGDALCFSIACASIIAKVSRDRLMCELEATYPGYHLAKHKGYGTALHMECISQKGISPIH 197 Query: 184 RRSFGPVKRALGL 196 RR+F P+K + Sbjct: 198 RRTFAPLKSMFDV 210 >UniRef50_B2KC56 Ribonuclease n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC56_ELUMP Length = 210 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 108/195 (55%), Gaps = 4/195 (2%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYE 59 E + ++ + G+DE GRGPL G VV AV +NDSKKL++ +R +Y Sbjct: 9 CEILQKNSCALIGIDEAGRGPLAGPVVACAVCAPKEIYHLFEDVNDSKKLTDVKREKIYA 68 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAG-LHIAPEYVLIDGN-RCPKLPM 117 I +++ +G A EIDE+NIL AT LAM+RA L I L+DGN + + Sbjct: 69 RINGYKIAYGVGFASAKEIDEINILQATFLAMRRACQKFLDINEALALVDGNHKIKDFLL 128 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 P V+ GD++ I+ AS++AKV RD M ++P YGF HKGY + H+ + EH Sbjct: 129 PQQTVIDGDAKSFSIAMASVIAKVHRDRYMRKAHELYPVYGFDGHKGYGSGKHIAAIKEH 188 Query: 178 GATEHHRRSFGPVKR 192 G + HR +F P+K Sbjct: 189 GPCKEHRMTFAPLKN 203 >UniRef50_D0NJ61 Ribonuclease n=1 Tax=Phytophthora infestans T30-4 RepID=D0NJ61_PHYIN Length = 249 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 123/195 (63%), Gaps = 7/195 (3%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + V GVDE GRGPL G VV AA + IAG++DSKK+ E +R AL+E + Sbjct: 39 YEAKGYTTVIGVDEAGRGPLAGPVVAAACHVPLDVTIAGIDDSKKILEPQREALFELLTS 98 Query: 64 K-ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIA-----PEYVLIDGNRCPK-LP 116 +++++ P ID++NIL A++ +M ++V + +VL+DGN+ P L Sbjct: 99 HPNITYAVHVNSPQRIDDINILQASLESMTKSVNEVAQQLQQKDKTFVLVDGNKLPPTLE 158 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 +PA AVVKGDS+V I+AASI+AKVTRD M D+ FPQYG AQHKGYPT H+ +A+ Sbjct: 159 LPAEAVVKGDSKVYSIAAASIIAKVTRDRLMREYDVKFPQYGLAQHKGYPTRDHVAAIAK 218 Query: 177 HGATEHHRRSFGPVK 191 HG E HR +F P+K Sbjct: 219 HGPCEIHRMTFAPLK 233 >UniRef50_B8CW25 Ribonuclease n=1 Tax=Halothermothrix orenii H 168 RepID=B8CW25_HALOH Length = 308 Score = 246 bits (629), Expect = 3e-64, Method: Composition-based stats. Identities = 86/192 (44%), Positives = 122/192 (63%), Gaps = 1/192 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 +AGVDE GRGPL G VV AAV+ P + GL+DSKKL+ K R L+EEI Sbjct: 66 NLFKEGFHFIAGVDEAGRGPLAGPVVAAAVVFKPETKVLGLDDSKKLTAKERETLFEEIY 125 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDG-NRCPKLPMPAMA 121 ++ALS +G + +ID+LNIL+A++ AM++A+ L +Y+LIDG N+ +L + A Sbjct: 126 DRALSIGVGIVDNKDIDKLNILNASLKAMKKALDSLSCPVDYILIDGKNKLSELNIKQQA 185 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 V+ GD++V I+AASI+AKVTRD + L +P+YGF +KGY T H+E L +G + Sbjct: 186 VIDGDNKVNVIAAASIIAKVTRDRILDKLHKKYPEYGFINNKGYGTREHIEALKAYGPSP 245 Query: 182 HHRRSFGPVKRA 193 HR SF V+ Sbjct: 246 IHRYSFSLVREY 257 >UniRef50_C0QW88 Ribonuclease n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QW88_BRAHW Length = 226 Score = 246 bits (629), Expect = 3e-64, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 115/199 (57%), Gaps = 11/199 (5%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD----------PARPIAGLNDSKKLSEK 52 E++ + + G+DEVGRG L G V AAVI+ + ++DSKK+S K Sbjct: 17 EYLSLGYKYICGIDEVGRGCLFGPVTVAAVIMPLELYNENELKKENIVEEIDDSKKISAK 76 Query: 53 RRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC 112 +R LY++I +KAL +S+ + IDE+NI +A LAM AV L+I P+ +LID + Sbjct: 77 KREELYDKIIDKALCYSIYSVDSKTIDEINIYNAVKLAMVNAVNNLNIKPDILLIDAVKL 136 Query: 113 PKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLE 172 + + ++ KGD++ I ASI+AKV RD M L + +Y +++KGY T H++ Sbjct: 137 -DINIKQCSITKGDAKSYSIGCASIVAKVYRDRMMNELPDFYQKYKVSKNKGYGTKEHMK 195 Query: 173 KLAEHGATEHHRRSFGPVK 191 + +G ++ HR SF P+K Sbjct: 196 TIEMYGPSDMHRYSFEPIK 214 >UniRef50_Q1MRU8 Ribonuclease HII n=2 Tax=Desulfovibrionales RepID=RNH2_LAWIP Length = 224 Score = 246 bits (628), Expect = 4e-64, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 116/199 (58%), Gaps = 11/199 (5%) Query: 3 EFVYPHTQLV-AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 E VY + L+ AG+DEVGRG L G VV AVIL I GL DSK +S RR L ++I Sbjct: 23 ELVYDNLSLLTAGLDEVGRGCLAGPVVAGAVILPDTISIDGLADSKTISSNRRYILAKKI 82 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM---- 117 E A+SW +G P EIDE+NIL A++ AM A L PE +LIDGN+ Sbjct: 83 YETAISWGIGVVWPKEIDEINILQASLKAMAHAATVLKTFPELLLIDGNKAIPQKFFIQF 142 Query: 118 ------PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHL 171 +++KGD+ +P ISAASI+AK RD M+ LD +PQY F+++KGY + H Sbjct: 143 GWNFLPIQHSIIKGDASIPAISAASIIAKTFRDTLMSKLDKRYPQYNFSKNKGYGSKTHR 202 Query: 172 EKLAEHGATEHHRRSFGPV 190 E L + G + HR +F V Sbjct: 203 EILQKIGPSPIHRMTFKGV 221 >UniRef50_Q31PW0 Ribonuclease HII n=2 Tax=Synechococcus elongatus RepID=RNH2_SYNE7 Length = 215 Score = 244 bits (625), Expect = 9e-64, Method: Composition-based stats. Identities = 88/183 (48%), Positives = 108/183 (59%), Gaps = 5/183 (2%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLALYEEIKEKA 65 Q VAGVDEVGRG L G VVTAAVIL G+ DSK+LS+++R LY I E A Sbjct: 19 QTVAGVDEVGRGCLFGPVVTAAVILPETAIAPLQQAGVTDSKRLSQRQRQQLYPLICEVA 78 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVK 124 L+ G A EI+ NIL AT LAM+RA+A L LIDGN+ P+L P V++ Sbjct: 79 LATGWGLASVAEIERWNILQATFLAMRRAIAKLDRPISRCLIDGNQQVPQLTYPQTTVIQ 138 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD I+AASILAKV RD + LD +P Y +HKGY TA H + + + G T HR Sbjct: 139 GDRHCITIAAASILAKVWRDRLIERLDERYPGYALGRHKGYGTAQHRQAILQLGPTPLHR 198 Query: 185 RSF 187 F Sbjct: 199 IRF 201 >UniRef50_Q8YP68 Ribonuclease HII n=19 Tax=Cyanobacteria RepID=RNH2_ANASP Length = 225 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 90/186 (48%), Positives = 114/186 (61%), Gaps = 5/186 (2%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 LVAGVDEVGRG L G VV A+VIL P A + DSKKLS RR+ L ++I A+ Sbjct: 36 LVAGVDEVGRGALFGPVVAASVILPASAFPHLMTAEIKDSKKLSHSRRVQLAQQISTLAI 95 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKG 125 W +G A EID +NIL AT+LAM+R+V L + P LIDGN+ L M +VKG Sbjct: 96 DWRIGYATTAEIDRINILQATLLAMKRSVKKLKLQPILCLIDGNQPVQDLLMLQQTIVKG 155 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D R I+AASI+AKV RD + L +P Y +KGY + HL LA+HGA+ HR+ Sbjct: 156 DERSLNIAAASIMAKVWRDDLIQRLATKYPMYDLKSNKGYGSKKHLLALAQHGASPLHRQ 215 Query: 186 SFGPVK 191 SF P + Sbjct: 216 SFRPCQ 221 >UniRef50_C6BVQ6 Ribonuclease n=4 Tax=Desulfovibrionales RepID=C6BVQ6_DESAD Length = 218 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 86/187 (45%), Positives = 109/187 (58%), Gaps = 7/187 (3%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 + AG+DE GRG L G VV AVIL + GL DSKKL E R L EIK++A+ W+L Sbjct: 15 ITAGIDEAGRGCLAGPVVAGAVILPEEYDLPGLTDSKKLDEAARDRLAVEIKKQAVCWAL 74 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP-------MPAMAVV 123 G + +D++NIL AT AM R+V L + P+ +++DGN+ P AVV Sbjct: 75 GVSRAQVVDQINILQATFRAMGRSVLHLKVKPQMLMVDGNKTIPAPHLNGVAGFRQEAVV 134 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGD ++P ISAASILAK RD M L + YGF HKGY T HL+ L EHG H Sbjct: 135 KGDLKIPAISAASILAKTFRDKLMVQLAKRYAAYGFEIHKGYGTKVHLDALKEHGPCAVH 194 Query: 184 RRSFGPV 190 R +F V Sbjct: 195 RMTFKGV 201 >UniRef50_A5IIL8 Ribonuclease HII n=7 Tax=Thermotogaceae RepID=RNH2_THEP1 Length = 238 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 88/192 (45%), Positives = 117/192 (60%), Gaps = 4/192 (2%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E +VAGVDE GRG L G VV AAV+L+ I G+NDSK+LS +R L++EI Sbjct: 5 ELYKKEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE--IEGINDSKQLSPAKRERLFDEIM 62 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 KA + +G A P EID NI +AT LAM RA+ L + P +VL+DG +L +P + Sbjct: 63 GKA-AVGIGIASPEEIDLHNIFNATKLAMNRALENLSVGPSFVLVDGKGI-ELRVPGTCL 120 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD + I AASI+AKV RD M+ ++PQ+ F +HKGY T HL ++ ++G Sbjct: 121 VKGDQKSKLIGAASIVAKVFRDRLMSEFHKMYPQFSFHKHKGYATKEHLNEIRKNGVLPI 180 Query: 183 HRRSFGPVKRAL 194 HR SF PV L Sbjct: 181 HRMSFEPVLELL 192 >UniRef50_C1QE08 Ribonuclease n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QE08_9SPIR Length = 232 Score = 243 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 115/199 (57%), Gaps = 11/199 (5%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD----------PARPIAGLNDSKKLSEK 52 E++ + + G+DEVGRG L G V AAVI+ + +DSKK+S K Sbjct: 21 EYLSLGYKYICGIDEVGRGCLFGPVTVAAVIMPLELNNDVEVARENIVEEADDSKKISAK 80 Query: 53 RRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC 112 +R LY++I KAL +S+ + IDE+NI +AT LAM AV L+I P+ +LID + Sbjct: 81 KREELYDKIISKALCYSVYSVDAKTIDEINIYNATKLAMVNAVRNLNIKPDILLIDAVKL 140 Query: 113 PKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLE 172 + + ++ KGD + I ASI+AKV RD M L V+ +Y A++KGY T H++ Sbjct: 141 -DIDIKQCSITKGDFKSYSIGCASIVAKVERDRMMNELPEVYQKYKVAKNKGYGTKEHMK 199 Query: 173 KLAEHGATEHHRRSFGPVK 191 + +GA++ HR SF P+K Sbjct: 200 AIEMYGASDMHRYSFEPIK 218 >UniRef50_D1VVL3 Ribonuclease n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVL3_9FIRM Length = 205 Score = 243 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 78/191 (40%), Positives = 115/191 (60%), Gaps = 7/191 (3%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 ++ ++L+AG+DEVGRG L G V++ A+I+ I G+NDSKKL+ K+R LY +I Sbjct: 9 DYRKKGSKLIAGIDEVGRGSLFGDVLSCAIIMKEDSNIEGVNDSKKLTAKKRKELYNKIL 68 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH------IAPEYVLIDGNRCPKLP 116 E +L+ +GRA+ ID+LNI AT L+M RA+ L + P+ VLID + Sbjct: 69 EDSLAVGIGRADAKTIDKLNIKMATHLSMVRAIENLRDSQGNLVVPDLVLIDAENI-ETT 127 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 + +++KGD I+ ASI+AKV RD+ ++P YG +HKGY T FH E L Sbjct: 128 IFQHSIIKGDENCYSIACASIIAKVYRDSLCDKWATIYPGYGIEKHKGYGTKFHREALKA 187 Query: 177 HGATEHHRRSF 187 +G + HR+SF Sbjct: 188 YGPSPMHRKSF 198 >UniRef50_A8MHC7 Ribonuclease HII n=3 Tax=Firmicutes RepID=RNH2_ALKOO Length = 203 Score = 242 bits (619), Expect = 4e-63, Method: Composition-based stats. Identities = 85/186 (45%), Positives = 112/186 (60%), Gaps = 7/186 (3%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 + +A DEVGRG L G+V+ AAVI+ I G+ DSKKLS K+R LYE IKEK+L+ Sbjct: 14 GYENIACCDEVGRGCLFGSVLAAAVIMPKDVIIDGVKDSKKLSHKKREQLYEIIKEKSLA 73 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLH------IAPEYVLIDGNRCPKLPMPAMA 121 +G ID++NI +AT LAM++A+ L +AP+Y+LID +P P A Sbjct: 74 IGVGTVSSEIIDKINIKNATRLAMKKAILSLKDKDGNIVAPDYILIDAEEI-DVPTPQSA 132 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 V+KGD I+AASI+AKV RD + P YG Q+KGY T H E L EHG + Sbjct: 133 VIKGDDLCHGIAAASIVAKVLRDRLCQRWEEEHPNYGIGQNKGYGTKAHREALKEHGPSP 192 Query: 182 HHRRSF 187 HR+SF Sbjct: 193 MHRKSF 198 >UniRef50_A0LV66 Ribonuclease HII n=41 Tax=Actinomycetales RepID=RNH2_ACIC1 Length = 307 Score = 242 bits (618), Expect = 6e-63, Method: Composition-based stats. Identities = 96/186 (51%), Positives = 114/186 (61%), Gaps = 2/186 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL--DPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDE GRG G +V AAVIL D IAGL DSK+L+ R ++Y EI +AL+WS Sbjct: 46 VAGVDEAGRGACAGPLVVAAVILGSDRRNRIAGLADSKQLTPAARESIYNEIISRALAWS 105 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + E+DEL + A + M+RAVAGL + P YVL DG L P +AV KGD V Sbjct: 106 VVVIPSSEVDELGVHAANITGMRRAVAGLAVRPAYVLTDGFSIAGLNAPGLAVCKGDEAV 165 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AAS++AKVTRD M L FP Y FA HKGY TA H LA HG HRRSF Sbjct: 166 ACIAAASVVAKVTRDRLMVELHEKFPMYEFATHKGYVTAGHRAALARHGPCPEHRRSFVT 225 Query: 190 VKRALG 195 V+RA G Sbjct: 226 VRRAGG 231 >UniRef50_Q5FFD4 Ribonuclease HII n=5 Tax=Rickettsiales RepID=RNH2_EHRRG Length = 220 Score = 241 bits (617), Expect = 8e-63, Method: Composition-based stats. Identities = 87/197 (44%), Positives = 123/197 (62%), Gaps = 5/197 (2%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP--ARPIAGLNDSKKLSEKRRLALY 58 +++ ++ GVDEVG G L G VV+AAV +NDSKKL+ K R +Y Sbjct: 18 ILKLKNNKECIIVGVDEVGYGSLAGPVVSAAVFFPNYNNETTQDINDSKKLTPKTRQKIY 77 Query: 59 EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL--HIAPEYVLIDGNRCPKLP 116 +I + + WS+G A EIDE NIL+AT +AM+RA+ GL HI +YV+IDGN+ P +P Sbjct: 78 NKIITR-VKWSIGFAHIFEIDEYNILNATHIAMKRALTGLNAHIDIDYVIIDGNKIPNIP 136 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 A A++ GD+ I+AASI+AKVTRD M L I +PQY + ++KGY T H+ L + Sbjct: 137 WNAQAIIGGDTISTSIAAASIIAKVTRDRLMETLHIQYPQYNWNKNKGYGTKDHITSLYK 196 Query: 177 HGATEHHRRSFGPVKRA 193 +G T HHR +F P+ + Sbjct: 197 YGKTIHHRNTFTPISKI 213 >UniRef50_Q7VRD2 Ribonuclease HII n=1 Tax=Candidatus Blochmannia floridanus RepID=RNH2_BLOFL Length = 205 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 95/199 (47%), Positives = 128/199 (64%), Gaps = 5/199 (2%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVIL---DPARPIAGLNDSKKLSEKRRLALYEE 60 F+ +VAGVDEVG G LVGAVV +AV++ D + +GL DSK LS K+RL Sbjct: 7 FLSKKATIVAGVDEVGCGSLVGAVVASAVLMLYPDQEQLFSGLIDSKALSNKKRLRFCNY 66 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP-- 118 I++ +L WS+G EID+LNI A +L+++RA+ L + P+ VLIDG P L Sbjct: 67 IQKYSLHWSIGMVNVTEIDQLNIFQARLLSIKRAICNLSMIPDLVLIDGKHAPSLNKNIL 126 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 VKGDSR+P ISAASI+AKVTRD M L +P+YGF ++KGY T FHL++L +G Sbjct: 127 YQCFVKGDSRIPVISAASIIAKVTRDQAMMMLHTQYPKYGFHRNKGYATVFHLKQLDLYG 186 Query: 179 ATEHHRRSFGPVKRALGLA 197 T +HR++F PVK L + Sbjct: 187 PTIYHRKTFAPVKYMLSMC 205 >UniRef50_O67768 Ribonuclease HII n=3 Tax=Aquificaceae RepID=RNH2_AQUAE Length = 196 Score = 240 bits (613), Expect = 2e-62, Method: Composition-based stats. Identities = 85/190 (44%), Positives = 111/190 (58%), Gaps = 2/190 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 ++ LVAGVDE GRGPL G VV AAVIL P DSKKL++K R YEEIK K Sbjct: 8 LWEKGLLVAGVDEAGRGPLAGPVVAAAVILPPFTEPFIKGDSKKLTKKEREEAYEEIKNK 67 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 AL+ + ID +NIL AT LAM+RA+ L + V+ D + M +VK Sbjct: 68 ALAVGTAVVDSAVIDRVNILRATKLAMKRALKDLKYHYDIVITDYVKLEGENC--MPLVK 125 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD + + ASI+AKV RD M ++P + FA +KGYP+ HLEK+ + TE HR Sbjct: 126 GDEKSLNCACASIIAKVIRDKIMEIYHKIYPDFNFASNKGYPSKTHLEKVEKGEYTEIHR 185 Query: 185 RSFGPVKRAL 194 +SF P+K+ L Sbjct: 186 KSFSPLKKKL 195 >UniRef50_Q3AP34 Ribonuclease HII n=7 Tax=Chlorobiaceae RepID=RNH2_CHLCH Length = 206 Score = 239 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 93/192 (48%), Positives = 119/192 (61%), Gaps = 6/192 (3%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP-----ARPIAGLNDSKKLSEKRRLAL 57 E ++ H + + G+DEVGRGPL G VV AAV+ + LNDSKKLS K R +L Sbjct: 7 EPLWQHYEFICGIDEVGRGPLAGPVVAAAVVFPRWFQPTEALLTLLNDSKKLSAKERESL 66 Query: 58 YEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLP 116 IK +AL W+L + + IDE+NIL ATMLAM AV L I P +L+DGNR L Sbjct: 67 VPAIKAQALHWALAEVQHNVIDEVNILQATMLAMNNAVKALPIIPSLLLVDGNRFTTDLA 126 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 +P +VKGDS V I+AAS+LAKV RDA M +P YGF +H GYPT+ H+E + + Sbjct: 127 IPYKTIVKGDSHVFSIAAASVLAKVHRDALMCVYATHYPHYGFERHAGYPTSAHIEAIRQ 186 Query: 177 HGATEHHRRSFG 188 HG HR+SF Sbjct: 187 HGRCPIHRQSFK 198 >UniRef50_Q0SSB4 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2_CLOPS Length = 272 Score = 239 bits (611), Expect = 3e-62, Method: Composition-based stats. Identities = 85/183 (46%), Positives = 107/183 (58%), Gaps = 3/183 (1%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDP---ARPIAGLNDSKKLSEKRRLALYEEIKEK 64 + VAGVDEVGRGPL G +V+AAVILD I +NDSKKLSE +R L E IKEK Sbjct: 85 DYKYVAGVDEVGRGPLAGPIVSAAVILDSSNLDDIILYINDSKKLSEHKREELSEIIKEK 144 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 ALS+S+ + EIDE I + +A GL+I P+ VL DG V+K Sbjct: 145 ALSYSISMCDSKEIDEKGIGYCNNHVFIKACEGLNIKPDLVLSDGYLIKNFNGENKHVIK 204 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD++ I+ ASI+AKV RD M +PQY F ++ GY T H++ L E G TE HR Sbjct: 205 GDTKSACIACASIIAKVYRDNIMKEYHKKYPQYDFEKNVGYGTKTHVDALKEVGPTEIHR 264 Query: 185 RSF 187 SF Sbjct: 265 MSF 267 >UniRef50_Q2SRV0 Ribonuclease HII n=5 Tax=Mollicutes RepID=RNH2_MYCCT Length = 207 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 1/187 (0%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 + ++G DE GRG L G +V A+VIL P + DSKKL+ K R L++EI + L Sbjct: 16 NITYLSGSDEAGRGCLAGPLVVASVILKPDYFNPLIKDSKKLNPKTRQVLFDEIIKNCLD 75 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP-MPAMAVVKGD 126 + + ++DELN L A++L + ++ L I P+ LIDGN+ L + ++++KGD Sbjct: 76 YQIMIISSKQVDELNPLQASLLGFKTTISNLKITPDLALIDGNQNINLENIKTLSIIKGD 135 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 I+ +SILAKVTRD + D ++P YGF HKGY T HL + ++G + HR+S Sbjct: 136 DNSFSIACSSILAKVTRDKILDQYDQIYPNYGFKSHKGYCTKKHLLAIQKYGVLDIHRKS 195 Query: 187 FGPVKRA 193 + P+K+ Sbjct: 196 YKPIKKI 202 >UniRef50_Q0AMK3 Ribonuclease HII n=3 Tax=Proteobacteria RepID=RNH2_MARMM Length = 218 Score = 239 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 108/188 (57%), Positives = 125/188 (66%), Gaps = 2/188 (1%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 +T +AGVDE GRGPL G VV AAVILDP RPI GL DSK LSE+RR L+ I+ A Sbjct: 20 NTVRIAGVDEAGRGPLSGPVVAAAVILDPTRPITGLGDSKALSERRRRELFRLIRANA-W 78 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGD 126 +G AEP EID LNILHATM AM+RAVA L + P VL+DGNR P LP PA A++KGD Sbjct: 79 VGIGIAEPAEIDRLNILHATMAAMRRAVARLPVRPTLVLVDGNRLPPGLPCPAEAIIKGD 138 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 ++ I AASI+AK RD M FP YGF HKGYP+A H L GA HRRS Sbjct: 139 AKEACIGAASIIAKTVRDDLMEQAARRFPGYGFEGHKGYPSAAHKAALETSGACPIHRRS 198 Query: 187 FGPVKRAL 194 + PV+ AL Sbjct: 199 YAPVRAAL 206 >UniRef50_C9KJR4 Ribonuclease n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJR4_9FIRM Length = 259 Score = 238 bits (609), Expect = 6e-62, Method: Composition-based stats. Identities = 93/187 (49%), Positives = 121/187 (64%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 ++VAGVDE GRGPL G V AAVIL + LNDSKKLS K R L++EI+EKA+ Sbjct: 67 RGHEIVAGVDEAGRGPLAGPVSVAAVILPHDLCLPKLNDSKKLSAKVREELFDEIQEKAI 126 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 + + ID +NI AT+ M A+ L AP+ VLID +LPMP+ +++KGD Sbjct: 127 AVGTALIDAQTIDRVNIYQATINGMYEAIFSLQPAPQEVLIDAVPLDRLPMPSESIIKGD 186 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 ++ ISAASI+AKVTRD M D ++P+YGFAQHKGY TA H+E L ++G HRRS Sbjct: 187 AKSASISAASIIAKVTRDRLMDEYDKIYPEYGFAQHKGYGTAQHIEALKKYGPCPIHRRS 246 Query: 187 FGPVKRA 193 F PV+ Sbjct: 247 FEPVRSI 253 >UniRef50_Q2S009 Ribonuclease HII n=1 Tax=Salinibacter ruber DSM 13855 RepID=RNH2_SALRD Length = 200 Score = 238 bits (609), Expect = 6e-62, Method: Composition-based stats. Identities = 88/190 (46%), Positives = 116/190 (61%), Gaps = 4/190 (2%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 + VAG+DE GRG L G VV AAVI+ P I + DSK LSE +RL I+++A+ Sbjct: 11 DGYERVAGLDEAGRGCLAGPVVAAAVIMPPQVEITAIQDSKALSEGQRLDARATIEDEAV 70 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR----CPKLPMPAMAV 122 + S+ R P EID+ NIL A + AM+RA +G P++VL+DGN+ P P V Sbjct: 71 AASIARCSPTEIDDRNILQAALEAMRRAASGCRPPPDFVLVDGNQWDRNLVDAPWPHETV 130 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD++ I+AASILAK RDA M L P+Y +A + GYPT H + L EHGAT H Sbjct: 131 VKGDAKSQSIAAASILAKTERDALMRDLHEAHPEYDWASNVGYPTQQHYDALREHGATPH 190 Query: 183 HRRSFGPVKR 192 HR+SF + Sbjct: 191 HRQSFTLFRD 200 >UniRef50_C6PQZ2 Ribonuclease n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQZ2_9CLOT Length = 293 Score = 238 bits (608), Expect = 7e-62, Method: Composition-based stats. Identities = 73/185 (39%), Positives = 106/185 (57%), Gaps = 5/185 (2%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVIL-----DPARPIAGLNDSKKLSEKRRLALYEEIK 62 + +AGVDEVGRGPL G + +V+L D + G+ DSKKLS R L + IK Sbjct: 98 NYVYIAGVDEVGRGPLAGPIAAGSVVLNLRSHDFKDLLLGIKDSKKLSHDTRERLSKLIK 157 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 K++S+++ EIDE I ++RA +GL I P+ VL DG L + V Sbjct: 158 AKSISYNISVINNAEIDERGIAWCNNEVLRRAASGLKITPDLVLSDGYAVKNLNIENEFV 217 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD++ I+ ASI+AKV RD M ++PQYGF ++ GY T H+E + ++G + Sbjct: 218 IKGDAKSASIACASIIAKVYRDNLMQEYAKIYPQYGFERNSGYGTEEHIEAIKKYGICKI 277 Query: 183 HRRSF 187 HR+SF Sbjct: 278 HRKSF 282 >UniRef50_C3MHC0 Ribonuclease HII n=12 Tax=Alphaproteobacteria RepID=RNH2_RHISN Length = 231 Score = 238 bits (608), Expect = 8e-62, Method: Composition-based stats. Identities = 95/183 (51%), Positives = 112/183 (61%), Gaps = 2/183 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG DE GRGPL G VV AAVILDP GLNDSK L+ ++R AL+ EI A S+ Sbjct: 35 VAGADEAGRGPLAGPVVAAAVILDPDAVPGGLNDSKLLTAEQREALFTEIMATAT-VSIA 93 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGDSRVP 130 + ID +IL A++ AM+RA+ GL IA + LIDG P LP A A+VKGDSR Sbjct: 94 SSSAAHIDATDILKASLDAMRRAIDGLSIAARFALIDGRDVPQGLPCHAKAIVKGDSRSV 153 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASI+AKVTRD MA D FP YGFA H GY T H + HG HR SF P Sbjct: 154 SIAAASIVAKVTRDRMMARADATFPAYGFALHAGYATVRHRSAIDSHGPCSLHRMSFRPF 213 Query: 191 KRA 193 + A Sbjct: 214 REA 216 >UniRef50_Q3A2F0 Ribonuclease HII n=3 Tax=Deltaproteobacteria RepID=RNH2_PELCD Length = 209 Score = 238 bits (608), Expect = 9e-62, Method: Composition-based stats. Identities = 88/191 (46%), Positives = 118/191 (61%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + +AG+DE GRGPL G VV AAV+L P + GLNDSKK+S K R L+ +I+ Sbjct: 19 LSRQGYRRIAGIDEAGRGPLAGPVVAAAVVLPPVFDLPGLNDSKKISAKLREKLFPQIRR 78 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 +AL + +G A E+D LN+L AT+LAM+RA+ L +Y+L+DG LP+P + Sbjct: 79 QALDYGIGLASAQEVDGLNVLQATLLAMRRALDRLAQPADYLLVDGITPVPLPLPQKTLK 138 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 +GDSR I+AAS+LAKV RD M D FP+YGFA HKGY +A H +A G H Sbjct: 139 QGDSRSLSIAAASVLAKVVRDRLMTTYDARFPEYGFAGHKGYGSAAHRAAIARLGPCPLH 198 Query: 184 RRSFGPVKRAL 194 R +F V+ L Sbjct: 199 RATFRGVREYL 209 >UniRef50_Q03S83 Ribonuclease HII n=39 Tax=Lactobacillaceae RepID=RNH2_LACBA Length = 257 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 93/190 (48%), Positives = 129/190 (67%), Gaps = 1/190 (0%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 + + VAG+DEVGRGPL G VVT+AVIL P I +NDSK+L+ K R LY I + Sbjct: 67 FWARGERVAGIDEVGRGPLAGPVVTSAVILPPDFDIPLVNDSKQLTAKERERLYPLILAQ 126 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A S S+G P ID++NI AT +AMQRAV GL +AP+ +++D + P + +P + ++K Sbjct: 127 AQSVSIGIGSPALIDQINIYQATRVAMQRAVLGLGLAPQQLIVDAMQIP-VDVPQIRLIK 185 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD++ ++AASI+AKV RD MA D ++P YGFAQ+ GY TA HL+ LA+ G T HR Sbjct: 186 GDAKSASVAAASIVAKVYRDHLMATYDELYPGYGFAQNAGYGTAEHLQGLADRGVTPIHR 245 Query: 185 RSFGPVKRAL 194 R+F PV++ L Sbjct: 246 RTFSPVQKIL 255 >UniRef50_Q11R91 Ribonuclease HII n=55 Tax=Bacteroidetes RepID=RNH2_CYTH3 Length = 202 Score = 237 bits (606), Expect = 1e-61, Method: Composition-based stats. Identities = 80/194 (41%), Positives = 111/194 (57%), Gaps = 2/194 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 + ++ AG+DE GRG + G VV AAVIL P + LNDSKKL+ K+R L ++I Sbjct: 8 FHSEGKIEAGLDEAGRGCMAGPVVAAAVILPPNYKHSLLNDSKKLTIKQRELLRQDIIRD 67 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL-HIAPEYVLIDGNRCPKLP-MPAMAV 122 AL + + ID++NIL+ATM AM +AV GL P +LIDGNR + + + + Sbjct: 68 ALDYHVAEVSHTVIDQINILNATMKAMHKAVKGLKKQQPNLLLIDGNRFKQYTGIEHVCI 127 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 V+GD I+AAS+LAK RD+ M L P+YG+ + GY T H + HG T + Sbjct: 128 VQGDGLYLSIAAASVLAKTHRDSLMERLAKEHPEYGWDVNAGYATEKHRLAMETHGLTPY 187 Query: 183 HRRSFGPVKRALGL 196 HR SF + L L Sbjct: 188 HRTSFHFKPKQLDL 201 >UniRef50_C6X037 Ribonuclease n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X037_FLAB3 Length = 218 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 83/188 (44%), Positives = 110/188 (58%), Gaps = 1/188 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 ++ + + AG DEVGRG L G VV AAVILD ++DSKKL+ K R+ L I Sbjct: 15 LKKKWSANYIEAGCDEVGRGCLCGPVVAAAVILDEKFVQNLVDDSKKLNFKTRIYLDAYI 74 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAM 120 K+ +++ P IDE NIL+A++ AM RA+ L PE +L+DGNR P +P Sbjct: 75 KDNVKEYAVAELPPSHIDEHNILNASIHAMHRALDQLQTRPELILVDGNRFHPYNFIPHQ 134 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 ++KGD+ + I+ ASILAK RD M L FP YG+ + GY T H E L +G T Sbjct: 135 CIIKGDASILSIACASILAKNYRDQLMIKLHDEFPHYGWKTNMGYATKEHREALNRYGPT 194 Query: 181 EHHRRSFG 188 EHHRRSF Sbjct: 195 EHHRRSFR 202 >UniRef50_A9TVJ6 Ribonuclease n=2 Tax=cellular organisms RepID=A9TVJ6_PHYPA Length = 655 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 88/220 (40%), Positives = 108/220 (49%), Gaps = 36/220 (16%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG------------------------L 43 + VAGVDE GRGPL G VV AA I+ + I G L Sbjct: 429 GFRNVAGVDEAGRGPLAGPVVAAACIIPASATIPGKICFCVSQWSCRASGPCQEEPYVRL 488 Query: 44 NDSKKLSEKRRLALYEEIKEKALSWS-----LGRAEPHEIDELNILHATMLAMQRAVAGL 98 N + E + +E SW + + +IDE+NIL AT+LAM V L Sbjct: 489 NGVAQWKETFTVHHLWMSRELWCSWFRVAGQIHVVDAAKIDEINILQATLLAMSTCVKKL 548 Query: 99 -----HIAPEYVLIDGNRCPKL--PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALD 151 AP+Y+LIDGNR P A V+KGD+ I+AASILAKVTRD M D Sbjct: 549 RKERGGEAPDYILIDGNRIPDELSKEEAQFVIKGDAECHVIAAASILAKVTRDRMMVDYD 608 Query: 152 IVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 +P YGF HKGY TA H+ L HG + HRRSF P+K Sbjct: 609 RRWPVYGFKAHKGYGTAAHIGALLNHGPCDIHRRSFAPLK 648 >UniRef50_Q3B6X8 Ribonuclease HII n=5 Tax=Chlorobiaceae RepID=RNH2_PELLD Length = 208 Score = 236 bits (604), Expect = 2e-61, Method: Composition-based stats. Identities = 81/191 (42%), Positives = 107/191 (56%), Gaps = 6/191 (3%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG-----LNDSKKLSEKRRLALY 58 ++ V G+DE GRGPL G VV AAV+ LNDSKKL+ R L Sbjct: 11 LLWNDFLRVCGIDEAGRGPLAGPVVAAAVVFPRWFSPDEGILRRLNDSKKLTPSLRRELA 70 Query: 59 EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPM 117 I+E+A W++ + ID +NIL ATMLAM RA L P+ +LIDGNR P +P+ Sbjct: 71 PAIREEAECWAVEAVDHETIDRINILRATMLAMNRAAESLPRQPDLLLIDGNRFTPNIPV 130 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 P +V GD+ V I+AAS+LAK RD M +P+YGF ++ GY T H+E + H Sbjct: 131 PYQTIVGGDALVFSIAAASVLAKTERDRMMEEYAERYPEYGFERNAGYGTREHVEAIRRH 190 Query: 178 GATEHHRRSFG 188 G + HR SF Sbjct: 191 GRSPIHRTSFR 201 >UniRef50_D0RRM6 Ribonuclease n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RRM6_9RICK Length = 199 Score = 236 bits (604), Expect = 2e-61, Method: Composition-based stats. Identities = 85/190 (44%), Positives = 121/190 (63%), Gaps = 3/190 (1%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 + V GVDEVGRGPL G VV+AAVIL L+DSKKLS+ +R +E +K+K+ + Sbjct: 11 SHFVVGVDEVGRGPLAGPVVSAAVILPLDFDYKCLDDSKKLSKVKREKAFEILKKKS-KF 69 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEY-VLIDG-NRCPKLPMPAMAVVKGD 126 LG AE EID++NIL A++++M+RAV + ++ +L+DG K + +KGD Sbjct: 70 KLGIAEVDEIDKINILQASLISMKRAVDQFDLPKDHKILVDGPWSFDKTNQNIITKIKGD 129 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 ++ P I+AASI+AKV RD M+ L F QY + + GY T HL+ + EHG T HHR+S Sbjct: 130 AKYPSIAAASIIAKVYRDQIMSKLSKNFVQYSWDTNSGYGTQKHLKAIKEHGITVHHRKS 189 Query: 187 FGPVKRALGL 196 F P+ + L L Sbjct: 190 FAPIHKILSL 199 >UniRef50_Q6MLA0 Ribonuclease HII n=1 Tax=Bdellovibrio bacteriovorus RepID=RNH2_BDEBA Length = 221 Score = 236 bits (603), Expect = 3e-61, Method: Composition-based stats. Identities = 89/185 (48%), Positives = 113/185 (61%), Gaps = 3/185 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + GVDEVGRG L G V AAVI + DSK LSEKRR L + I ++ + +G Sbjct: 38 IIGVDEVGRGCLAGPVYAAAVIFKSDALNDLVTDSKLLSEKRREELADLILKEHI-VGIG 96 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLP-MPAMAVVKGDSRV 129 A EIDE+NIL+A++LAM+RAV L + +VL+DGN+ P L +VKGD RV Sbjct: 97 SASVEEIDEINILNASLLAMKRAVEKLGVKSGHVLVDGNKKIPNLKGFEQSTIVKGDLRV 156 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 ISAASI+AKVTRD M L + +P YGF HKGY T H + + +HG HRRSF Sbjct: 157 APISAASIVAKVTRDRLMKDLGVKYPHYGFEIHKGYSTPVHKQSIVDHGPCIAHRRSFAG 216 Query: 190 VKRAL 194 VK + Sbjct: 217 VKEYV 221 >UniRef50_B7IF45 Ribonuclease HII n=3 Tax=Thermotogaceae RepID=RNH2_THEAB Length = 220 Score = 236 bits (603), Expect = 3e-61, Method: Composition-based stats. Identities = 90/190 (47%), Positives = 116/190 (61%), Gaps = 6/190 (3%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 +VAGVDE GRGPL G VV AAVIL+ I GL+DSKKL+ ++R L+ EI +K+ +++ Sbjct: 2 IVAGVDEAGRGPLFGPVVAAAVILNEE--IDGLDDSKKLTSRKREKLFLEIIKKSY-FAI 58 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGL--HIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 A EID+ NILHAT +AM RA+ L I + +DG L P +VKGDS Sbjct: 59 SIATADEIDKFNILHATEIAMDRALERLRKKINFDIAFVDGKNL-NLKFPFKCIVKGDSL 117 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 V EISAASILAKV RD + + F Y +HKGYPT HL+ + EHG T HR ++ Sbjct: 118 VKEISAASILAKVVRDRIIVSYAKKFSSYMLEKHKGYPTQLHLKLIKEHGLTPLHRLTYK 177 Query: 189 PVKRALGLAS 198 PV L + Sbjct: 178 PVMELLSITQ 187 >UniRef50_B1VG82 Ribonuclease n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VG82_CORU7 Length = 241 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 82/184 (44%), Positives = 106/184 (57%), Gaps = 2/184 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDE GRG G + A+ IL +AGLNDSKKL+ KRR L+ I E A+++ Sbjct: 41 VAGVDEAGRGACCGPITIASCILPDHGVPELAGLNDSKKLTPKRRERLFGAITEHAVAYE 100 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + EID+ I +A + M R VAGL + P+ VL D P+L +VKGD+ Sbjct: 101 IVHIPAAEIDQRGIQYANINGMYRVVAGLGVEPDVVLTDAVHLPELACEHAPLVKGDALS 160 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 P ISAASILAKV+RD M + +P YG A HKGY TA H+ + HGA HR ++ Sbjct: 161 PAISAASILAKVSRDRLMVEMAEKYPGYGLAGHKGYGTAKHMAAVRLHGACPEHRYTYSN 220 Query: 190 VKRA 193 V A Sbjct: 221 VATA 224 >UniRef50_B9ZNV1 Ribonuclease n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNV1_9GAMM Length = 226 Score = 236 bits (602), Expect = 4e-61, Method: Composition-based stats. Identities = 112/185 (60%), Positives = 131/185 (70%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAGVDEVGRGPL G VV AAVIL + GL DSKKLS RR AL EI+E+A++W+LG Sbjct: 36 VAGVDEVGRGPLAGPVVAAAVILPESFAAPGLTDSKKLSAGRRQALDVEIRERAVAWALG 95 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 RAE EID LNI AT+LAMQRAVA L AP+++L+DG P+ P A A+V GD V Sbjct: 96 RAEAAEIDALNIHRATLLAMQRAVAALSQAPDHLLVDGRFTPEGPWSAEAIVGGDGSVAA 155 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 ISAAS++AKV RDAEM AL +P YGF +H GYPTA+H + LA G HRRSFGPV Sbjct: 156 ISAASVIAKVARDAEMTALHERYPDYGFDRHAGYPTAYHRDALARLGPCVEHRRSFGPVA 215 Query: 192 RALGL 196 RAL Sbjct: 216 RALAA 220 >UniRef50_C4V2D5 Ribonuclease n=2 Tax=Clostridiales RepID=C4V2D5_9FIRM Length = 259 Score = 236 bits (602), Expect = 4e-61, Method: Composition-based stats. Identities = 90/188 (47%), Positives = 116/188 (61%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 +VAG+DE GRGPL G V AAVIL + LNDSKKLSEK R LYE I A+ Sbjct: 61 RGNCIVAGIDEAGRGPLAGPVAVAAVILPQEYLLLRLNDSKKLSEKVREELYETIVSDAV 120 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 S+ + + ID +NIL AT M AVA L P+ VLID P+L M + ++VKGD Sbjct: 121 SYHVELIDAETIDRMNILEATRRGMYDAVAALLPTPQEVLIDAVALPRLRMASQSIVKGD 180 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 ++ I+AASILAKVTRD M D +P YGFAQHKGY T H+E + ++G HR++ Sbjct: 181 AKSASIAAASILAKVTRDRLMLTYDKEYPVYGFAQHKGYGTREHIEAIRKYGICPLHRKT 240 Query: 187 FGPVKRAL 194 F P++ + Sbjct: 241 FEPIRSMI 248 >UniRef50_A1HN67 Ribonuclease n=3 Tax=Veillonellaceae RepID=A1HN67_9FIRM Length = 265 Score = 236 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 87/194 (44%), Positives = 114/194 (58%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 F L+AGVDE GRGPL G VV AAVIL + + LNDSKKLS +R LYE+I Sbjct: 72 FYEQGLDLIAGVDEAGRGPLAGPVVVAAVILPKRQHLPMLNDSKKLSPHQRSLLYEKIIG 131 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 A++ + +ID +NI AT+ M R + L P+ LID K+ +P M+++ Sbjct: 132 TAVAVNHVVIPVCQIDSMNIYQATLQGMYRVLENLSPKPQVALIDAMPLRKIVLPHMSII 191 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD+ I+AASI+AKV RD M +D+++P YGFA+HKGY T HL L G H Sbjct: 192 NGDALSASIAAASIVAKVVRDRYMDEMDVLYPGYGFAKHKGYATPEHLAALRRLGPCPIH 251 Query: 184 RRSFGPVKRALGLA 197 RRSF P+K GL Sbjct: 252 RRSFEPIKSWGGLG 265 >UniRef50_C7RDQ2 Ribonuclease n=6 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDQ2_ANAPD Length = 209 Score = 235 bits (600), Expect = 7e-61, Method: Composition-based stats. Identities = 87/183 (47%), Positives = 113/183 (61%), Gaps = 1/183 (0%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 V+ +L+AG+DEVGRGPL G VVT AVI+ I G+ DSKKL+ K+ L+L E+I + Sbjct: 14 VHEDYELIAGIDEVGRGPLAGPVVTCAVIMKRDSNIGGVTDSKKLTRKKMLSLKEKILDD 73 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A+ ++ G A P IDELNI +AT AM+ A+ L I PE VLID R +P M +VK Sbjct: 74 AIDFAYGYANPSLIDELNIKNATHKAMEDALNKLKIRPEIVLIDAERI-NTDIPQMNIVK 132 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD IS ASILAKV RD M ++P Y F + GY T H E L ++G T HR Sbjct: 133 GDLNEYVISCASILAKVRRDDIMINFSKIYPGYSFETNMGYGTKKHYEGLEKYGETPIHR 192 Query: 185 RSF 187 ++F Sbjct: 193 QTF 195 >UniRef50_B0N757 Ribonuclease n=4 Tax=Bacteria RepID=B0N757_9FIRM Length = 206 Score = 234 bits (599), Expect = 9e-61, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 2/188 (1%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 + G+DE GRGP+ G +V A V+ +NDSK+LS K+R LY+ I E AL Sbjct: 14 GYDYIIGLDEAGRGPMAGELVVAGVVFPKGFYDERINDSKQLSAKKREVLYDLIIENALY 73 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 + + ++D LN+ A+ M++ + L + L D ++++KGD+ Sbjct: 74 YDIEIISVADVDRLNVYQASKQGMEKCLELLKKEKMFALTDAMPIDYPD--HLSIIKGDA 131 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + I+ ASILAKVTRD M A + +P+YGF +HKGY T H E L ++G HR+SF Sbjct: 132 KSISIAGASILAKVTRDRLMEAYALEYPEYGFEKHKGYVTKAHKEALGKYGVCPIHRKSF 191 Query: 188 GPVKRALG 195 GPV++ L Sbjct: 192 GPVQKILS 199 >UniRef50_C1FF37 Ribonuclease n=3 Tax=Mamiellales RepID=C1FF37_9CHLO Length = 262 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 84/186 (45%), Positives = 116/186 (62%), Gaps = 2/186 (1%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 ++V GVDE GRGPL G VV AA + I +NDSK+++E+ R +YEE+ Sbjct: 66 GKKIVCGVDEAGRGPLAGPVVAAACVFPEDLVIDAINDSKQMTEEEREEVYEELMANDQV 125 Query: 68 W-SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKG 125 S+ + IDE+NIL ATM AM ++V GL ++VLIDGNR P L A A+VKG Sbjct: 126 IKSVCVIDHERIDEINILEATMQAMAKSVEGLSTRADWVLIDGNRVPPPLIDRAEAIVKG 185 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D++ I+AAS+LAKVTRD M + +P YGF QHKGY H++ + +HG +HR+ Sbjct: 186 DAKSVCIAAASVLAKVTRDRMMVKIHDEYPVYGFDQHKGYGVKAHMDAIHKHGPCPYHRK 245 Query: 186 SFGPVK 191 +F P+K Sbjct: 246 TFAPMK 251 >UniRef50_C9LMH5 Ribonuclease n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMH5_9FIRM Length = 256 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 92/192 (47%), Positives = 122/192 (63%), Gaps = 1/192 (0%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 F + VAG+DEVGRGPL G V AAVIL P IAGLNDSKK++ +RR + ++I E Sbjct: 62 FYKKGLEYVAGIDEVGRGPLAGPVTVAAVILKPHFFIAGLNDSKKVAPRRREEIAKKIHE 121 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 A+ S+ P EID NI ATM AM RAV L I P+ V++D P+P++++V Sbjct: 122 TAVDISIVSLSPEEIDMRNIYAATMEAMYRAVRNLKIQPQAVIVDAMPL-HFPVPSLSLV 180 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD++ ++AASI+AKV RD M D V+P YGF+Q+KGY TA H+E + G T H Sbjct: 181 HGDAKSASVAAASIVAKVHRDHLMDEYDKVYPGYGFSQNKGYGTAEHIEAIRTLGITPIH 240 Query: 184 RRSFGPVKRALG 195 R+SF PVK + Sbjct: 241 RKSFEPVKSMVN 252 >UniRef50_Q04F44 Ribonuclease n=2 Tax=Oenococcus oeni RepID=Q04F44_OENOB Length = 209 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 1/192 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E Q++AG+DEVGRG + G VV + IL ++ DSK+ ++++R L EEIK Sbjct: 19 ELNDEGYQIIAGIDEVGRGCVAGPVVACSCILPANFNVSETYDSKRFNKRQRFLLEEEIK 78 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 + + ++ G A EID +NI + LAM+R+V L P+ +LID L + + + Sbjct: 79 KTSCLFAFGEASVTEIDLINIYQSARLAMKRSVMNLLQMPDALLIDAMAV-DLNLKQLKI 137 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 + GD I+AASILAK RD M + +P+YGF ++ GY T+ + L E+G T Sbjct: 138 IHGDQLSNSIAAASILAKCHRDRIMIKMAEKYPEYGFERNVGYLTSEAKKALLEYGITPI 197 Query: 183 HRRSFGPVKRAL 194 HR++F P+ + + Sbjct: 198 HRKTFAPISKLI 209 >UniRef50_Q6NGJ8 Ribonuclease HII n=1 Tax=Corynebacterium diphtheriae RepID=RNH2_CORDI Length = 229 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 82/184 (44%), Positives = 108/184 (58%), Gaps = 2/184 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILD--PARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDE GRG G + AA I+ P + L DSKKLS +R LY IK+ AL+WS Sbjct: 36 VAGVDEAGRGSCCGPITIAACIMPQRPIAQLQALTDSKKLSAAKRAELYPLIKKYALAWS 95 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + EID I HA + M+RA+ L +AP YVL D + P L P++ ++ GD+ V Sbjct: 96 IIHISAAEIDREGIQHANIFGMRRAIEKLDVAPGYVLTDAMKVPGLRCPSLPIIGGDAAV 155 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AAS+LAK +RD M L +P+YG HKGY T H++ + HGAT HR S+ Sbjct: 156 RCIAAASVLAKHSRDLIMDDLGGKYPEYGLEDHKGYGTKSHMDAVRHHGATPEHRYSYSN 215 Query: 190 VKRA 193 VK A Sbjct: 216 VKAA 219 >UniRef50_A9B6H3 Ribonuclease HII n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=RNH2_HERA2 Length = 207 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 83/198 (41%), Positives = 112/198 (56%), Gaps = 5/198 (2%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAV-----ILDPARPIAGLNDSKKLSEKRRLAL 57 + ++VAGVDEVGRG G VV AAV +L+ +AG+NDSK LS + R A+ Sbjct: 10 QLWRNGARIVAGVDEVGRGCWAGPVVAAAVSFPTHLLNDPVALAGINDSKTLSAEARQAM 69 Query: 58 YEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM 117 ++I+ A LG H ID I AT AM AV L P+ ++ID + P+LP+ Sbjct: 70 AQQIRHLASGIGLGVVSAHLIDLFGIAEATKWAMMHAVLSLPSLPDGLVIDWVKLPELPL 129 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 ++ KGD+ ++AASI+AKV RD M D P+YG+A HKGY TA H LA H Sbjct: 130 LQRSLPKGDAISISVAAASIIAKVYRDNLMHEYDQRDPRYGWAAHKGYGTAQHQRALAAH 189 Query: 178 GATEHHRRSFGPVKRALG 195 G + HRRSF P+ + Sbjct: 190 GPSGLHRRSFKPLAAFVD 207 >UniRef50_Q2GD69 Ribonuclease HII n=2 Tax=Neorickettsia RepID=RNH2_NEOSM Length = 195 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 93/194 (47%), Positives = 117/194 (60%), Gaps = 6/194 (3%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + L+AGVDEVGRG L G VV AVIL I G DSK LS RL+ YEEI Sbjct: 3 YRKSENGLIAGVDEVGRGCLAGPVVACAVILTENLAIPG--DSKVLSRAVRLSWYEEIIS 60 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP---AM 120 + + ++G + EI+ +NIL+AT+LAM+RA+ L + P VLIDG Sbjct: 61 NSYN-AIGMSSVKEIETMNILNATLLAMERALERLPVVPTTVLIDGRDIINNAAKYKEVK 119 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 +VV GD EI AASI+AKVTRD M LD+ +P Y + +KGY T HLE LA++G T Sbjct: 120 SVVSGDKIYGEIKAASIVAKVTRDRLMEGLDLTYPYYRWKFNKGYGTKEHLEALAKYGVT 179 Query: 181 EHHRRSFGPVKRAL 194 +HHRR F PVKR L Sbjct: 180 DHHRRKFAPVKRML 193 >UniRef50_C2C194 Ribonuclease n=1 Tax=Listeria grayi DSM 20601 RepID=C2C194_LISGR Length = 259 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 84/191 (43%), Positives = 117/191 (61%), Gaps = 1/191 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E++ +AGVDEVGRGPL G VV AAVIL + G+NDSK+LSE++R Y+ I+ Sbjct: 65 EYLKAGYSRIAGVDEVGRGPLAGPVVAAAVILPNDFSVTGINDSKQLSEEKRQYYYDIIR 124 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E+A+S + ID++NI AT LAM A+ L AP++ LID + +A+ Sbjct: 125 EQAVSIGISIQSHEVIDQVNIYEATKLAMAEALDNLDPAPDFTLIDAMKL-GYSKQELAI 183 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD++ I+AASI+AKVTRD+ M + ++P Y FA + GY T HL L + G Sbjct: 184 IKGDTKSISIAAASIIAKVTRDSLMKEAEQLYPGYDFAHNMGYGTKLHLAGLDQQGVCPI 243 Query: 183 HRRSFGPVKRA 193 HR +F PVK A Sbjct: 244 HRLTFAPVKAA 254 >UniRef50_Q14PF8 Ribonuclease n=1 Tax=Spiroplasma citri RepID=Q14PF8_SPICI Length = 207 Score = 233 bits (595), Expect = 2e-60, Method: Composition-based stats. Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 1/189 (0%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 YP+T ++AG DE GRG L G +V +AVIL + DSKK++ K+R+ L +EI A Sbjct: 12 YPNTTILAGTDEAGRGCLAGPLVVSAVILPLDYVNDEIKDSKKITAKQRIKLADEIMSIA 71 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 +S+++ +ELN A++ MQ+A+ L + + +L D + A++KG Sbjct: 72 ISYTIEIISVAMFEELNPKQASIFGMQQAIDNLMVKSDIILTDAEKLGP-SYNHQAIIKG 130 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 DS I AASILAKVTRD M D +PQY F +KGY T HL L + G T HR+ Sbjct: 131 DSLSQSIVAASILAKVTRDNLMLKFDQDYPQYDFKNNKGYGTKKHLLALQQFGITSLHRK 190 Query: 186 SFGPVKRAL 194 ++ PV+ + Sbjct: 191 TYRPVRETM 199 >UniRef50_B6BS88 Ribonuclease n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BS88_9RICK Length = 190 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 79/182 (43%), Positives = 118/182 (64%), Gaps = 2/182 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +++AGVDEVGRG L+G V AAVIL+ L DSK +S+ +R L IK+ ++ W Sbjct: 2 KIIAGVDEVGRGSLIGPVYAAAVILNKNIDKKLLKDSKTISKIKRELLSNYIKKNSI-WV 60 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP-MPAMAVVKGDSR 128 +G+A EID++NIL A++LAM+RA+ L P +LIDGN+ P + A++KGD + Sbjct: 61 IGKASVKEIDKINILQASLLAMKRAIKKLKKKPTQILIDGNKVPDIKNYNLKAIIKGDKK 120 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +P ISAASI+AKV RD + +L Y + Q+ GY T HL+ + + G ++HHR++F Sbjct: 121 IPSISAASIIAKVARDKFITSLAKTNKGYHWDQNFGYGTKQHLKAIKKLGISKHHRKTFS 180 Query: 189 PV 190 P+ Sbjct: 181 PI 182 >UniRef50_A5N820 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2_CLOK5 Length = 288 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 5/191 (2%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD-----PARPIAGLNDSKKLSEKRRLA 56 + + + VAG DEVGRGPL G +V AAVIL+ + I G+ DSKKL++K R Sbjct: 93 FDKYFGNYIYVAGTDEVGRGPLAGPIVAAAVILNLNYVEDKKLILGVKDSKKLTQKARYE 152 Query: 57 LYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP 116 L + IKEKALS+S+ EID+ I +++AV GL + E VL DG LP Sbjct: 153 LSQTIKEKALSYSIAVINNKEIDKRGISWCNNEVLRKAVLGLKLPVELVLSDGYAVKNLP 212 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 + V+KGDS+ I++ASI+AKV RD M V+ +Y F + GY T H+ + + Sbjct: 213 VRNEFVIKGDSKSVSIASASIIAKVYRDELMREYSKVYTEYNFQSNSGYGTKEHIGAIKK 272 Query: 177 HGATEHHRRSF 187 +G + HR SF Sbjct: 273 YGTCKIHRLSF 283 >UniRef50_A5IZB4 Ribonuclease n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZB4_MYCAP Length = 206 Score = 233 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 64/191 (33%), Positives = 107/191 (56%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 + +L+AGVDE GRG G +V A+VI+ + DSKKLS K+R L++EI + Sbjct: 9 WNDYKLIAGVDEAGRGCCAGPLVVASVIMPNGYINENIKDSKKLSAKQRDILFDEILKVC 68 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 + + + +D+ N ++ M+ + L+ P+ V+ D + +L + + +VKG Sbjct: 69 IDYHIVTLPSSYVDKYNPKKSSKNGMKICIDSLNTKPDLVITDFEKIDELAIKQVNLVKG 128 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 DS ++ ASILAKVTRD M + + +Y F +HKGY T H E + ++GA+ HR Sbjct: 129 DSISFNVACASILAKVTRDRYMIKIANKYKEYEFEKHKGYCTKRHTESIIKYGASPEHRL 188 Query: 186 SFGPVKRALGL 196 ++ V+ A+ + Sbjct: 189 TYKNVREAISI 199 >UniRef50_C5RBD5 Ribonuclease n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD5_WEIPA Length = 254 Score = 231 bits (591), Expect = 8e-60, Method: Composition-based stats. Identities = 83/190 (43%), Positives = 116/190 (61%), Gaps = 1/190 (0%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 + ++VAG+DEVGRGPL G VV AAV++D + + ++DSK+LSEK R ++ EI+EK Sbjct: 66 WQQGKVVAGIDEVGRGPLAGPVVAAAVVIDDSFDMTIVHDSKQLSEKTRQSIDTEIREKV 125 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 + ++ G + +ID LNI A+ +AM+++V L + + +LID L +P ++KG Sbjct: 126 VDFAFGVVDAKDIDRLNIYEASRVAMRQSVEALSVPIDGLLIDAMTV-DLEIPQEKLIKG 184 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D R I AASILAK RD M FP YGF + GY TA HL L G T HR+ Sbjct: 185 DDRSISIGAASILAKNYRDNLMKDFAQQFPGYGFEHNAGYGTAEHLAGLNTLGITPIHRK 244 Query: 186 SFGPVKRALG 195 SF PVK+ L Sbjct: 245 SFAPVKKFLN 254 >UniRef50_D1BMP6 Ribonuclease n=3 Tax=Veillonella RepID=D1BMP6_VEIPT Length = 265 Score = 231 bits (589), Expect = 1e-59, Method: Composition-based stats. Identities = 92/183 (50%), Positives = 119/183 (65%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAGVDEVGRGP+ G V AAVIL P I GLNDSKKL+E++R ALY+ I ++A++ S Sbjct: 77 VAGVDEVGRGPIAGPVTVAAVILPPMTLIPGLNDSKKLTEEKREALYDIIMDEAVAVSCI 136 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 P +IDELNI T AM A+ L + E V+ D + P L +P +++KGDS+ Sbjct: 137 SYGPEKIDELNIYEVTRQAMYEAIRTLSVPAEAVVADAMKLPDLTIPVESIIKGDSKSAN 196 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASI+AKVTRD M +LD FP YGF HKGY T H E + + G T HR+SF P+K Sbjct: 197 IAAASIIAKVTRDRYMKSLDDEFPGYGFGIHKGYYTELHKEAIEQQGVTPLHRKSFEPIK 256 Query: 192 RAL 194 + Sbjct: 257 SIV 259 >UniRef50_A3ER37 Ribonuclease n=2 Tax=Leptospirillum sp. Group II RepID=A3ER37_9BACT Length = 228 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 85/189 (44%), Positives = 109/189 (57%), Gaps = 4/189 (2%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD---PARPIAGLNDSKKLSEKRRLALYE 59 EF VAGVDEVGRG L G VV AAVIL G+ DSK LS +R+AL + Sbjct: 11 EFYKKGFLRVAGVDEVGRGALAGPVVAAAVILPMPLEFFENIGIRDSKLLSPSKRVALSD 70 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMP 118 ++ SWS+G + EI+ LNI AT+LAM+RAV GL P+ +L+DG P L Sbjct: 71 RLRSLLFSWSVGESTVSEINALNIRRATLLAMKRAVEGLPEFPDILLVDGREIVPDLVCK 130 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 + GD R+ I+AASI+AKV RD M+ LD + YG A++KGY TA H + L G Sbjct: 131 QESFTGGDRRILSIAAASIIAKVYRDNMMSELDNAYAGYGLAENKGYGTAQHRDGLLLRG 190 Query: 179 ATEHHRRSF 187 + HR F Sbjct: 191 VSSIHRAVF 199 >UniRef50_Q5PBG2 Ribonuclease HII n=6 Tax=Anaplasmataceae RepID=RNH2_ANAMM Length = 243 Score = 230 bits (587), Expect = 2e-59, Method: Composition-based stats. Identities = 79/186 (42%), Positives = 111/186 (59%), Gaps = 4/186 (2%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPAR--PIAGLNDSKKLSEKRRLALYEEIKEKALS 67 ++ GVDEVG G + G VV AAV L I + DSK LS K+R L+ +I A Sbjct: 23 SVIVGVDEVGYGAIAGPVVAAAVYLPERECDYIKDIKDSKALSSKKREELFCKITAHA-K 81 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGD 126 + +G A EI++ NIL A+ ++M+RA+ L + + VL+DG+R P LP +VKGD Sbjct: 82 YGVGFARVREIEQHNILVASHISMKRALQNLGVKADLVLVDGSRAPAGLPWAVKTIVKGD 141 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S I+AASI+AKVTRD M L +P+Y + Q+ GY T H++ L +G T HR + Sbjct: 142 SISTSIAAASIIAKVTRDRFMRRLHEQYPEYAWNQNCGYGTKAHMQSLKLYGKTAQHRST 201 Query: 187 FGPVKR 192 F PVK+ Sbjct: 202 FAPVKQ 207 >UniRef50_D0L036 Ribonuclease n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L036_HALNC Length = 216 Score = 229 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 136/211 (64%), Gaps = 14/211 (6%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 + E P + AGVDE GRGPL G VV AA++L P PI G+NDSKKL+E++R+ L++E Sbjct: 6 LFEMQTPGL-IYAGVDEAGRGPLAGPVVAAAIVLYPDDPIVGVNDSKKLTERQRVKLFDE 64 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE-------YVLIDGNRCP 113 I +A S+++ A HEID +NIL A++LAM+RAV ++ + + +DGNRCP Sbjct: 65 ITRRAQSFAIAEATVHEIDTINILQASLLAMRRAVMAVYDQMKTQGQTLGRIHVDGNRCP 124 Query: 114 KLPMP------AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT 167 L P A++ GD+R I++ASILAKVTRD M +D ++PQY FA+HKGYPT Sbjct: 125 DLNDPDAGFMECHALIGGDARDAAIASASILAKVTRDRLMLDMDKLYPQYEFAKHKGYPT 184 Query: 168 AFHLEKLAEHGATEHHRRSFGPVKRALGLAS 198 A H + L E GA HR SF PV+ L ++ Sbjct: 185 ARHRDLLIEFGACPEHRSSFAPVRAILSQSN 215 >UniRef50_Q73MG1 Ribonuclease HII n=1 Tax=Treponema denticola RepID=RNH2_TREDE Length = 198 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 80/194 (41%), Positives = 115/194 (59%), Gaps = 18/194 (9%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI-KEKALSWS 69 ++ G+DE GRGPL G V AAVIL + + L DSKKL+EK+R + + I + + W+ Sbjct: 1 MLCGIDEAGRGPLAGPVTAAAVILPSSFDFSILKDSKKLTEKKREEVRKTIYADPNVIWA 60 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIA--------------PEYVLIDGNRCPKL 115 +G A +EIDE+NIL AT LAM+RA GL++ P+ +++DGN P + Sbjct: 61 IGWASNYEIDEINILQATFLAMERAYEGLYLKLQEFCKLNNDKFIEPD-IIVDGNFIPNI 119 Query: 116 PMPA--MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEK 173 + A+VK D V E+ AASILAK RD M ++P+YG+ +HKGY T H+E Sbjct: 120 KNCSSIKALVKADDSVYEVMAASILAKTARDRMMIRYSWIYPEYGYEKHKGYGTKKHIEA 179 Query: 174 LAEHGATEHHRRSF 187 + +G + RRSF Sbjct: 180 IRFNGYSPIQRRSF 193 >UniRef50_B0TH73 Ribonuclease n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH73_HELMI Length = 205 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 84/193 (43%), Positives = 108/193 (55%), Gaps = 1/193 (0%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 ++AGVDE GRG L G VV AAVIL + GLNDSKKLS RR AL EIK Sbjct: 12 LRRKGFHVIAGVDEAGRGSLAGPVVAAAVILPLGCMMEGLNDSKKLSPARREALAVEIKR 71 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN-RCPKLPMPAMAV 122 AL+W +G ID + I+ +T AM A+ L P+Y+++DGN + P A+ Sbjct: 72 LALAWGIGIVSSQVIDRIGIVPSTFRAMSLAIDRLGDRPDYLIVDGNQKVPGYEGTQEAL 131 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 + GD+ ++AASILAKV RD M + FP YGF QHKGY T H + E G Sbjct: 132 IDGDALAAPVAAASILAKVVRDGLMKRYSLFFPGYGFEQHKGYGTQAHRSAILEQGTCLL 191 Query: 183 HRRSFGPVKRALG 195 HR +F ++R G Sbjct: 192 HRETFVHLRRPEG 204 >UniRef50_Q8RDX3 Ribonuclease HII n=12 Tax=Fusobacterium RepID=RNH2_FUSNN Length = 215 Score = 228 bits (583), Expect = 7e-59, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 121/201 (60%), Gaps = 13/201 (6%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP-ARPIAGLNDSKKLSEKRRLALYE 59 + + Y + V GVDE GRGPL G VV AAVIL + +NDSKKL+EK+R LY+ Sbjct: 13 LYDLEYKN---VIGVDEAGRGPLAGPVVAAAVILKEYTEELDEINDSKKLTEKKREKLYD 69 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL----HIAPEYVLIDGN-RCPK 114 I + ++G + EID+LNIL+A LAM+RA+ L + VL+DGN + + Sbjct: 70 IIMKN-FDVAVGISTVEEIDKLNILNADFLAMRRALKDLKSLKNEKEYTVLVDGNLKIKE 128 Query: 115 LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKL 174 + +VKGD++ I+AASI+AKVTRD M L ++P Y F +HKGY T H+E + Sbjct: 129 YIGKQLPIVKGDAKSLSIAAASIIAKVTRDRLMKDLANIYPDYSFEKHKGYGTKTHIEAI 188 Query: 175 AEHGATE-HHRRSFGPVKRAL 194 + GA E HR+ F +++ L Sbjct: 189 KDKGAIEGVHRKVF--LRKIL 207 >UniRef50_C6XGP6 Ribonuclease n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGP6_LIBAP Length = 209 Score = 228 bits (583), Expect = 7e-59, Method: Composition-based stats. Identities = 89/182 (48%), Positives = 111/182 (60%), Gaps = 2/182 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG+DEVGRG L G VV AA+ILDP G+NDSKK+S K+R LYE+I A+ S+ Sbjct: 26 VAGIDEVGRGALAGPVVVAAIILDPNNIPFGINDSKKISHKKREELYEKITSSAII-SIS 84 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGDSRVP 130 A ID+ NI AT+ A+ AV L + P LIDG P LP A AV+KGDS Sbjct: 85 SASHQYIDKHNIHKATLDAIYHAVENLQVIPRSALIDGRSIPEDLPCQAFAVIKGDSISL 144 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASI+AKVTRD M +P YGF H GYPTA H + + E G + HR +F P+ Sbjct: 145 SIAAASIIAKVTRDRLMRIAHKKYPDYGFDSHVGYPTAKHQQVIKEKGPSCIHRLTFRPL 204 Query: 191 KR 192 + Sbjct: 205 RN 206 >UniRef50_C0GQX3 Ribonuclease n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQX3_9DELT Length = 214 Score = 228 bits (583), Expect = 7e-59, Method: Composition-based stats. Identities = 94/178 (52%), Positives = 112/178 (62%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGR 72 AG+DE GRG L G VV A V+L IA L DSKK++ K R +L EIK L+WSLG Sbjct: 23 AGLDEAGRGCLAGPVVAAVVVLPLDAQIARLTDSKKITSKVRESLIPEIKSTCLAWSLGL 82 Query: 73 AEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEI 132 A P EID +NIL ATM AM+RAV L + P +L+DGN+ L +P +V GD P I Sbjct: 83 AWPREIDRINILQATMTAMKRAVLHLGLTPGQLLVDGNQKIPLNIPQKCIVGGDMTEPCI 142 Query: 133 SAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 SAASILAK RD M LD +P YGF QHKGY T HL+ L GA+ HR+SF V Sbjct: 143 SAASILAKTFRDMLMTKLDRRYPGYGFGQHKGYGTRKHLQALKSLGASPMHRKSFKGV 200 >UniRef50_A0LMM5 Ribonuclease HII n=10 Tax=Bacteria RepID=RNH2_SYNFM Length = 233 Score = 227 bits (580), Expect = 1e-58, Method: Composition-based stats. Identities = 87/193 (45%), Positives = 114/193 (59%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + QLVAG+DEVGRGPL G VV AAV++ + G+ DSKKLS +R + E+I Sbjct: 19 QAYRQGFQLVAGIDEVGRGPLAGPVVAAAVVVPAGVRLPGVADSKKLSAGQRESCCEDIL 78 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 +GR EP EID +NIL AT AM AVAGL P +LIDG L + + Sbjct: 79 SCGCDVGIGRVEPSEIDRVNILQATFQAMIAAVAGLKTPPHCLLIDGPYELPLFIAQKGI 138 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +GD++ I+AASI+AKV RD M + +P YGF ++KGY TA HL+ L +G Sbjct: 139 PQGDAKSLSIAAASIVAKVHRDRLMCEYHLKYPVYGFDRNKGYGTARHLDALRRYGPCPI 198 Query: 183 HRRSFGPVKRALG 195 HR SFG V+ + G Sbjct: 199 HRLSFGGVRASEG 211 >UniRef50_C4LJB6 Ribonuclease n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJB6_CORK4 Length = 261 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 80/187 (42%), Positives = 103/187 (55%), Gaps = 2/187 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILD--PARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDE GRG G + AA IL P P+ L DSKKLS R L+ IK+ A SWS Sbjct: 68 VAGVDEAGRGACCGPMAIAACILPAKPIHPLDKLTDSKKLSPTMREKLFPIIKDSAESWS 127 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + +ID+ + + M+RAV L P YVL D R L P + ++ GDS Sbjct: 128 VILIPAADIDKYGVQAMNIAGMRRAVGVLDQRPHYVLTDAMRVDGLTQPHLPIIGGDSAA 187 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AAS+LAKVTRD M L +P YG +HKGY TA H++ + HG T HR ++ Sbjct: 188 RCIAAASVLAKVTRDRYMCDLAERYPGYGLEKHKGYGTAQHIDAVRLHGGTPEHRYTYRN 247 Query: 190 VKRALGL 196 V A+G Sbjct: 248 VAEAVGA 254 >UniRef50_C1AAT1 Ribonuclease n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAT1_GEMAT Length = 228 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 86/189 (45%), Positives = 117/189 (61%), Gaps = 5/189 (2%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEEIK 62 + L+ GVDEVGRGPL G VV A+++ R IAG++DSK+L + R+ L I+ Sbjct: 11 LRAQYGSLLVGVDEVGRGPLAGPVVACAIVMPADRRAIAGVDDSKRLDHRTRVTLAARIR 70 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAG----LHIAPEYVLIDGNRCPKLPMP 118 + AL+ SLG A E+D LNI HAT+LAMQRA+A L P +V++DG L + Sbjct: 71 DHALALSLGAASAREVDRLNIYHATVLAMQRALARIPQRLGAEPHHVVVDGKPLRTLGVV 130 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 AVVKGD++ I+ ASI+AKVTRD M AL Y + ++ GY T H + +++HG Sbjct: 131 HTAVVKGDAKCYGIACASIVAKVTRDRLMTALAQRHGHYAWERNAGYGTTQHRDGISQHG 190 Query: 179 ATEHHRRSF 187 T HHRRSF Sbjct: 191 LTAHHRRSF 199 >UniRef50_Q313K1 Ribonuclease HII n=7 Tax=Desulfovibrio RepID=RNH2_DESDG Length = 263 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 93/209 (44%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 14 GVDEVGRGPLVGAVVTAAVILDPARP---------IAGLNDSKKLSEKRRLALYEEIKEK 64 G+DE GRG L G VV AAVIL PA ++GL DSKKLSEKRRL L IK Sbjct: 43 GIDEAGRGCLAGPVVAAAVILPPAGAPAAPHIAAALSGLTDSKKLSEKRRLTLEPAIKSC 102 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL-----------HIAPEYVLIDGNR-- 111 A+ W +G P ID +NIL AT AM AV L + P ++ +DG++ Sbjct: 103 AVRWGVGVVWPQVIDRINILQATYRAMSLAVRHLRGGGAAASMPAGLPPVFLAVDGDKTI 162 Query: 112 -------CPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKG 164 L +P A+V GD V ISAAS+LAK RD M ALD + YGFA HKG Sbjct: 163 PGQVLQAVTGLSVPQEAIVGGDGCVMAISAASVLAKTFRDRLMTALDKRYSGYGFATHKG 222 Query: 165 YPTAFHLEKLAEHGATEHHRRSFGPVKRA 193 Y TA H+E + G HR SF VK A Sbjct: 223 YGTAAHIEAIRRLGPCRMHRLSFAKVKPA 251 >UniRef50_C9RN38 Ribonuclease n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RN38_FIBSS Length = 247 Score = 226 bits (577), Expect = 3e-58, Method: Composition-based stats. Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 34/223 (15%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 + +F ++ +V G+DEVGRGPL G VV A +L + LNDSKKLS +R A+++ Sbjct: 22 LRKFAAENSAIVVGIDEVGRGPLAGPVVACAAVLKSPDALLTLNDSKKLSRPKREAMFDA 81 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH--------------------- 99 +K+ +++ A EIDE+NIL A LAM+RA+ L Sbjct: 82 VKDACACYAIASASVEEIDEINILEADFLAMRRALQALGFPGLNESAPEIPIEVKGSLND 141 Query: 100 IAPE-----------YVLIDGN-RCPKLPM-PAMAVVKGDSRVPEISAASILAKVTRDAE 146 + P+ + +DGN + +P M +VKGD R+ ISAASILAKV RD Sbjct: 142 VMPDSVPASALSSNVLIAVDGNLKIRGVPAENQMPIVKGDGRIASISAASILAKVFRDRY 201 Query: 147 MAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 M L+ ++P YGF +H GY T HL+ + G + HR+SF P Sbjct: 202 MDKLEELYPGYGFDKHAGYGTKAHLDAIRRQGFSPAHRKSFHP 244 >UniRef50_Q5SLU5 Ribonuclease HII n=8 Tax=Deinococci RepID=RNH2_THET8 Length = 203 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 85/189 (44%), Positives = 114/189 (60%), Gaps = 3/189 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 + LVAG+DE GRG G +V AV+L P DSK LS K R L E++KE Sbjct: 10 FWRKGLLVAGLDEAGRGAWAGPIVVGAVVLPPGEYP--FRDSKLLSPKARERLAEKVKEV 67 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 AL+++LG AE E+D L +L AT+LA +RA+ L +APE ++ D P+P ++ K Sbjct: 68 ALAFALGVAEAAEVDRLGVLKATLLAAERALLSLPLAPEALVTD-YLPLPTPLPLLSPPK 126 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 D + P ++AASILAKV RD M LD ++P YGFA+HKGY T H E L G + HR Sbjct: 127 ADEKSPTVAAASILAKVHRDRIMDELDRLYPGYGFARHKGYGTQEHQEALLALGPSPVHR 186 Query: 185 RSFGPVKRA 193 + F PV +A Sbjct: 187 KRFAPVAQA 195 >UniRef50_A9NF30 Ribonuclease HII n=2 Tax=Bacteria RepID=RNH2_ACHLI Length = 202 Score = 225 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 83/188 (44%), Positives = 108/188 (57%), Gaps = 2/188 (1%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 + GVDE GRGPL G VV AAVI + +NDSK LS K+R L+E IK+ AL Sbjct: 15 KGYTYICGVDEAGRGPLAGPVVAAAVIFEKGFYHEDINDSKTLSAKKRETLFELIKQHAL 74 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 + + ID++NIL A AM+ A++ L I P+Y L D + P ++ GD Sbjct: 75 AIGVSVVNHEVIDKINILEAARHAMEDAISKLKIKPQYALTDHMDIKGI--PYTSIKHGD 132 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 I+AASI+AKVTRD M D V+PQYGF HKGY T HLE L +G + HR++ Sbjct: 133 QLSISIAAASIIAKVTRDKLMVDYDEVYPQYGFKDHKGYGTRKHLEALNLYGVSPIHRKT 192 Query: 187 FGPVKRAL 194 F PV + L Sbjct: 193 FAPVAKLL 200 >UniRef50_B2V752 Ribonuclease HII n=3 Tax=Sulfurihydrogenibium RepID=RNH2_SULSY Length = 197 Score = 225 bits (574), Expect = 8e-58, Method: Composition-based stats. Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 1/186 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E + + G+DE GRGPL G +V A+VI + DSK LSEK R L+E+I Sbjct: 7 ELFSQGYEKIVGIDEAGRGPLAGPLVIASVIFPKHQKPFIHTDSKGLSEKEREYLFEKIH 66 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 + A ++ E EID+ I +A + M+ + L + L+D + + + + + Sbjct: 67 DYAEEINITIVENTEIDKFGISNAAKIYMENNLKSLKSKWDIALVDFVKLDE-SINHLPL 125 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD I+AASI+AKV RD M +P + F +HKGY T H +++ + G T Sbjct: 126 IKGDEISHTIAAASIIAKVVRDRIMIEYKEKYPNFSFDKHKGYATKQHYQEIKKFGITPI 185 Query: 183 HRRSFG 188 HRRSF Sbjct: 186 HRRSFN 191 >UniRef50_A5HUH4 Ribonuclease n=1 Tax=uncultured bacterium RepID=A5HUH4_9BACT Length = 229 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 83/207 (40%), Positives = 106/207 (51%), Gaps = 13/207 (6%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP---IAGLNDSKKLSEKRRLALY 58 +E V GVDE GRGP G V AA + PA A L DSKKLS +R + Sbjct: 21 LESAASGNGAVIGVDEAGRGPWAGPVTAAAFWIYPAAKDSLPASLTDSKKLSASKRQQIE 80 Query: 59 EEIKE--KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL--------HIAPEYVLID 108 + + W++ + ++ID IL AT AM AVA L ++ VL+D Sbjct: 81 QALCAPHSQHLWAVKHSSVNQIDTCGILPATFAAMAEAVAELAKTLQKRHNLPVAMVLVD 140 Query: 109 GNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTA 168 GN P L P AVV+GDSR I+AASILAK +RD M L +P YG+ + GY T Sbjct: 141 GNLLPPLDFPCQAVVRGDSRSLSIAAASILAKQSRDEVMTELASHYPDYGWQTNAGYGTK 200 Query: 169 FHLEKLAEHGATEHHRRSFGPVKRALG 195 H + L G T HHR+SF P+K L Sbjct: 201 AHQQALQRCGITPHHRKSFAPIKAHLS 227 >UniRef50_Q4A278 Putative ribonuclease n=2 Tax=dsDNA viruses, no RNA stage RepID=Q4A278_EHV86 Length = 209 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 73/188 (38%), Positives = 107/188 (56%), Gaps = 8/188 (4%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPI-AGLNDSKKLSEKRRLALYEEIK-EKALSW 68 +V GVDE GRG L G VV A + PI + DSKK++EK+R+ +E + + Sbjct: 21 IVVGVDEAGRGCLAGPVVAGACFVPENEPIHPLIKDSKKMTEKQRMEAFEYLTLNSNIKC 80 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM---PAMAVVKG 125 EP+EID++NIL+ATM AM + L+DG++ PK+ + +KG Sbjct: 81 YASFIEPYEIDDINILNATMKAMGNVINESG--ANLALVDGDKTPKMFVDTSEIQTFIKG 138 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH-HR 184 DSR+ IS AS++AKV+RD M L +P+YGFA H GY T H+ + ++G HR Sbjct: 139 DSRMYSISCASVIAKVSRDLYMEELSKTYPEYGFANHMGYGTQAHMAAIEKNGPIPFVHR 198 Query: 185 RSFGPVKR 192 S+ P+K+ Sbjct: 199 YSYAPIKK 206 >UniRef50_A8RBU7 Ribonuclease n=4 Tax=Erysipelotrichaceae RepID=A8RBU7_9FIRM Length = 208 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 80/191 (41%), Positives = 109/191 (57%), Gaps = 2/191 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + Q + G+DE GRGP+ G +V AAV + DSKKLSEK+R L+ +I + Sbjct: 11 WYKEGKQAIVGIDEAGRGPIAGPLVVAAVSFPDDYDDDEIYDSKKLSEKKRELLFRKIIK 70 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 +A + + + ID NI AT AMQR + + VL D P +++V Sbjct: 71 EAREYHILIVDTKTIDTENIYRATQNAMQRLCDEFQMI-DGVLTDAMPLPFCKQDCISLV 129 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE-H 182 KGD + I+AASILAKVTRD M A D+ +PQYGFA+HKGYPT HLE L +G + Sbjct: 130 KGDQKSVSIAAASILAKVTRDHIMMAYDLQYPQYGFAKHKGYPTKVHLEALHRYGVIDGL 189 Query: 183 HRRSFGPVKRA 193 +R S+GPV + Sbjct: 190 YRHSYGPVAKM 200 >UniRef50_D2RIH6 Ribonuclease H n=2 Tax=Acidaminococcus RepID=D2RIH6_ACIFE Length = 270 Score = 222 bits (566), Expect = 6e-57, Method: Composition-based stats. Identities = 88/190 (46%), Positives = 113/190 (59%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 F VAG DE GRGPL G +VTAAVIL + + GLNDSKK++ RR LY EI E Sbjct: 65 FWARGMDQVAGCDEAGRGPLAGPLVTAAVILPHSIWLPGLNDSKKVTAARREILYGEILE 124 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 +A+S ++ P EID LNI A AM + L + P+ + D M +V Sbjct: 125 QAVSVTVSILGPREIDRLNIYQAAKTAMTLCLTHLKVRPQAAVTDAMPLEIPGMEVEDLV 184 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GDSR ++AASI+AKVTRD M +D +PQYGFA+HKGY TA H++ + + G T H Sbjct: 185 HGDSRSAAVAAASIIAKVTRDHLMEDMDRQYPQYGFAKHKGYGTARHIQAILDCGPTPWH 244 Query: 184 RRSFGPVKRA 193 RRSF P+K Sbjct: 245 RRSFEPLKSM 254 >UniRef50_A5PBF7 Ribonuclease n=2 Tax=Erythrobacter RepID=A5PBF7_9SPHN Length = 211 Score = 222 bits (566), Expect = 6e-57, Method: Composition-based stats. Identities = 93/196 (47%), Positives = 110/196 (56%), Gaps = 11/196 (5%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 L+ GVDE GRGPL G VV AAV+L P GL+DSKKLS +R L +I+ + Sbjct: 11 RDAPLIVGVDEAGRGPLAGPVVAAAVVLCKPCP-GGLDDSKKLSAAKRSKLEPQIQRR-C 68 Query: 67 SWSLGRAEPHEIDELNILHATMLAM----QRAVAGLHIAPEYVLIDGNRCP-----KLPM 117 +W L EP ID LNI ATMLAM QR + L P VLIDGN P + Sbjct: 69 AWGLAVVEPEVIDRLNIFGATMLAMTLATQRCIEALGAEPAEVLIDGNMTPHGRREEWRW 128 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 PA A+V GD + ISAASILAK RD M P YG+ +KGY + H+E L H Sbjct: 129 PARAIVGGDGKEACISAASILAKEYRDRIMVEAAKAHPHYGWENNKGYGSKSHMEALRLH 188 Query: 178 GATEHHRRSFGPVKRA 193 G T HRRSF PV +A Sbjct: 189 GPTPLHRRSFAPVAQA 204 >UniRef50_D2LBW7 Ribonuclease H n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LBW7_RHOVA Length = 239 Score = 222 bits (566), Expect = 6e-57, Method: Composition-based stats. Identities = 95/189 (50%), Positives = 117/189 (61%), Gaps = 2/189 (1%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 + + L+AGVDE GRGP G VV AAVI +P AG+NDSKKL+ R L+ +I Sbjct: 43 LALQRKYGGLIAGVDEAGRGPWAGPVVAAAVIF-HGKPPAGVNDSKKLAPAERENLFSKI 101 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 A +G A IDE+NI HAT AM A++ L AP LIDGNRCPKL +P+ A Sbjct: 102 FA-AAHVGIGIAPVELIDEINIYHATHRAMCDAISALAFAPNAALIDGNRCPKLDIPSEA 160 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +V GD+ I+AASI+AKVTRD M L FP Y + ++KGY TA H L E+G T Sbjct: 161 LVSGDALSISIAAASIIAKVTRDRMMTELASTFPPYRWERNKGYGTADHASALREYGVTL 220 Query: 182 HHRRSFGPV 190 HHRRSF PV Sbjct: 221 HHRRSFRPV 229 >UniRef50_A0QV44 Ribonuclease HII n=27 Tax=Actinomycetales RepID=RNH2_MYCS2 Length = 272 Score = 222 bits (566), Expect = 6e-57, Method: Composition-based stats. Identities = 86/184 (46%), Positives = 113/184 (61%), Gaps = 2/184 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPAR--PIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDEVGRG G +V AA +L P R +A L+DSKKL EK R L+ I+ AL++ Sbjct: 32 VAGVDEVGRGACAGPLVVAACVLGPNRLESLAALDDSKKLGEKERERLFPLIRRYALAYH 91 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + HE+D + A + M+RAVAGL + P YVL DG R P L +P++ V+ GD+ Sbjct: 92 VVFIPSHEVDRRGVHVANIEGMRRAVAGLSVRPGYVLSDGFRVPGLSVPSLPVIGGDAAA 151 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AAS+LAKV+RD M ++ P YGFA+HKGY T H L HG HR S+ Sbjct: 152 ACIAAASVLAKVSRDRLMVEMEEQHPGYGFAEHKGYITPAHTAALTRHGPCVEHRYSYVN 211 Query: 190 VKRA 193 V+RA Sbjct: 212 VRRA 215 >UniRef50_Q11KH2 Ribonuclease HII n=47 Tax=Alphaproteobacteria RepID=RNH2_MESSB Length = 253 Score = 221 bits (565), Expect = 9e-57, Method: Composition-based stats. Identities = 90/182 (49%), Positives = 110/182 (60%), Gaps = 2/182 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG+DE GRGPL G VV AAV+LDP R GL+DSK+L+ + R L +EI E A + S+ Sbjct: 34 VAGLDEAGRGPLAGPVVAAAVVLDPDRIPEGLDDSKRLTAEARERLVQEIFEVAAAVSVA 93 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMAVVKGDSRVP 130 IDE NIL A++ AM+RA+ GL + P Y L DG P LP P AVVKGD R Sbjct: 94 SLCAASIDESNILKASLEAMRRALDGLCVRPAYALADGRDIPPGLPCPCRAVVKGDQRSQ 153 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA-TEHHRRSFGP 189 I+AAS++AKV RD M + P YGF H GY T H E + +G T HR SF P Sbjct: 154 SIAAASMVAKVVRDRMMVRTGTLMPHYGFHSHVGYATERHREAITAYGPVTRLHRMSFSP 213 Query: 190 VK 191 K Sbjct: 214 FK 215 >UniRef50_Q6AJE5 Ribonuclease HII n=1 Tax=Desulfotalea psychrophila RepID=RNH2_DESPS Length = 225 Score = 221 bits (564), Expect = 9e-57, Method: Composition-based stats. Identities = 81/194 (41%), Positives = 114/194 (58%), Gaps = 3/194 (1%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 ++AG DEVGRGPL G V+ AAVIL DSK LS K+R+ L++ + E Sbjct: 26 GYDIIAGTDEVGRGPLAGPVIAAAVILPADCDHHLFQDSKILSHKKRVHLFQLLTEIDAF 85 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHI---APEYVLIDGNRCPKLPMPAMAVVK 124 +G IDE+NIL A++LAM+ A+ L P ++L+DG + + +A++K Sbjct: 86 IGIGTVSEKIIDEINILQASLLAMKLAIEDLASNCSRPSFLLVDGKFKVPIDLAQVALIK 145 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 G+S+ I+AASI+AKVTRD M L +PQYGF + GYPT H E + E G T +HR Sbjct: 146 GESKSASIAAASIVAKVTRDRYMQDLHSQYPQYGFNTNSGYPTKKHREAIGEFGITCYHR 205 Query: 185 RSFGPVKRALGLAS 198 RSF VK + ++ Sbjct: 206 RSFKGVKEYVDISQ 219 >UniRef50_B2S1N3 Ribonuclease HII n=2 Tax=Borrelia RepID=RNH2_BORHD Length = 181 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 75/182 (41%), Positives = 109/182 (59%), Gaps = 3/182 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILD-PARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 ++ G+DEVGRG + G V++AAVI + L+DSKKL + +R L I E + ++ Sbjct: 1 MICGIDEVGRGCIFGPVLSAAVIFKGNPNFLNELDDSKKLKKAKREYLSSLILENSY-YA 59 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM-AVVKGDSR 128 ID++NI HA++LAMQ A L I + VL+DG PK+ + A++KGDS Sbjct: 60 FAEVSNETIDKINIHHASLLAMQIAYEKLDINCDLVLVDGKFIPKIKAKKIQAIIKGDSI 119 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 + EI AASI+AKV RD M + ++P Y ++KGYPT H E + +HG + HRRSF Sbjct: 120 INEIKAASIIAKVQRDKLMDEYNKIYPLYALNKNKGYPTKEHKEAIKKHGISNLHRRSFK 179 Query: 189 PV 190 + Sbjct: 180 FI 181 >UniRef50_B3DVH3 Ribonuclease n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVH3_METI4 Length = 226 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 77/187 (41%), Positives = 119/187 (63%), Gaps = 3/187 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPI-AGLNDSKKLSEKRRLALY-EEI 61 + +++AG+DEVGRG + G VV AAVIL P L DSK + EK+R + + Sbjct: 12 LLTKGYRVIAGIDEVGRGAIAGPVVAAAVILPQDLPFHKYLKDSKAVEEKKRKQVVQWLL 71 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDG-NRCPKLPMPAM 120 KE +S+ LG + EI+ +NI + +LAM+RA++ L P+ +L+DG P L +P++ Sbjct: 72 KEGRISFGLGFSFVEEIERINIHGSCLLAMRRAISCLEERPDILLVDGIFSPPHLSIPSL 131 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 +V GD++V I+AAS++AKV+RD M L ++P+YG+ ++KGY TA H E L G + Sbjct: 132 TIVGGDAKVASIAAASLVAKVSRDGWMVKLSSLYPEYGWEKNKGYGTANHFESLRTKGLS 191 Query: 181 EHHRRSF 187 +HR+SF Sbjct: 192 PYHRKSF 198 >UniRef50_C0E2A8 Ribonuclease n=2 Tax=Corynebacterium matruchotii RepID=C0E2A8_9CORY Length = 236 Score = 221 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 77/184 (41%), Positives = 103/184 (55%), Gaps = 2/184 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILD--PARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDE GRG G + AA IL P ++ L DSKKLS R AL+ I+ A++WS Sbjct: 22 VAGVDEAGRGACAGPITIAACILPSQPLAALSRLTDSKKLSAATRAALFPLIQHHAVAWS 81 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + +ID+ I HA + M+RAVA L + P YVL D + + ++ GD+ Sbjct: 82 ILHISAADIDQYGIQHANVFGMRRAVALLDVQPGYVLTDALKVDGFACSYLPIIGGDAAA 141 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 ISAAS+LAK RD MA L +P+Y FA HKGY T H+ + +GA+ HR S+ Sbjct: 142 RCISAASVLAKHARDLVMAELAETYPRYEFASHKGYGTKVHMTAVRRYGASPVHRYSYAN 201 Query: 190 VKRA 193 V A Sbjct: 202 VAAA 205 >UniRef50_C8PZH5 Ribonuclease n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZH5_9GAMM Length = 240 Score = 221 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 92/224 (41%), Positives = 126/224 (56%), Gaps = 40/224 (17%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPA------------------------RPIAGLNDS 46 + GVDEVGRGPL+G VV A+I D A P++ L DS Sbjct: 5 FIIGVDEVGRGPLLGDVVVCALIFDKAILSIKEDSLSTDLPTADSVSISHNHPLSALTDS 64 Query: 47 KKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAG-----LHIA 101 KKLSEK+R AL+ I++ A + + + ID+LNIL AT+L M++AVAG L Sbjct: 65 KKLSEKKREALFSLIEQTASAHQVVKISASLIDQLNILQATLLGMKQAVAGVMAQMLAQY 124 Query: 102 PEY---VLIDGNRCP---KLPMPAM-----AVVKGDSRVPEISAASILAKVTRDAEMAAL 150 P V++DGN+ P LP A+VKGD + IS AS++AKVTRD +M AL Sbjct: 125 PTATFSVMVDGNKLPVLFDLPNYQQITHEQAIVKGDGKHACISGASVIAKVTRDRDMVAL 184 Query: 151 DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRAL 194 ++P YG QHKGYPTA H++ + +G HR+SF P+K+ + Sbjct: 185 SKLYPDYGIEQHKGYPTAAHIQAIEHYGILPMHRKSFAPIKQRI 228 >UniRef50_A5CDI4 Ribonuclease HII n=17 Tax=Rickettsieae RepID=RNH2_ORITB Length = 205 Score = 221 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 81/181 (44%), Positives = 112/181 (61%), Gaps = 2/181 (1%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 +++VAGVDE GRGPL G VV AAV+++ + I + DSK LS+ +R + Y++I + + Sbjct: 13 SEIVAGVDEAGRGPLAGPVVAAAVVVNQSIMIDDIKDSKVLSKSKRESCYDKITN-SYYY 71 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 S+G A EID+ NIL AT LA RAV L I P VL+DGN +++V+GD Sbjct: 72 SIGIASVQEIDKYNILEATKLACIRAVKNLAIIPTKVLVDGNMNF-TDNRFISIVRGDQI 130 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 IS+ASI+AKVTRD M L +P YG+ Q+ GY T H++ + +G T HHR SF Sbjct: 131 CYSISSASIVAKVTRDRIMQILHKEYPVYGWNQNCGYGTKLHIDAIKTYGQTIHHRVSFK 190 Query: 189 P 189 Sbjct: 191 F 191 >UniRef50_A5WDY2 Ribonuclease HII n=1 Tax=Psychrobacter sp. PRwf-1 RepID=RNH2_PSYWF Length = 302 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 91/242 (37%), Positives = 119/242 (49%), Gaps = 55/242 (22%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDP------------ARPIAGLNDSKKLSEKRRL 55 + GVDEVGRGPL G+VV AA IL P+A L DSKKL+E++R Sbjct: 51 GFEFEIGVDEVGRGPLYGSVVVAAAILPKAWSGETEVGLLQDTPLAILTDSKKLTERKRE 110 Query: 56 ALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYV---------- 105 L+E +K+ AL++ + IDE+NIL AT+L M+ A L + V Sbjct: 111 KLFEPVKQHALAYLVVEVPAGVIDEINILQATILGMRVACEQLMVEITKVWRDASELPTA 170 Query: 106 ---------LIDGNRCPKLP------------------------MPAMAVVKGDSRVPEI 132 LIDGN+ P L A A VKGD+R I Sbjct: 171 PSTPLGFKLLIDGNKVPDLDEARLATHGICLADMTVTQPAGMVKFCAEAWVKGDARHNAI 230 Query: 133 SAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKR 192 +AAS+LAKV RD ++ A +P YG HKGYPT H+E +A G HRRSF PV++ Sbjct: 231 AAASVLAKVYRDRQLIADGARYPGYGLEGHKGYPTKAHVEAIARLGVLPEHRRSFKPVQQ 290 Query: 193 AL 194 A+ Sbjct: 291 AI 292 >UniRef50_B0JV09 Ribonuclease HII n=3 Tax=Chroococcales RepID=RNH2_MICAN Length = 208 Score = 219 bits (560), Expect = 3e-56, Method: Composition-based stats. Identities = 83/190 (43%), Positives = 112/190 (58%), Gaps = 6/190 (3%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPA----RPIAGLNDSKKLSEKRRLALYEEIKEKA 65 L+AGVDEVGRG L G VV A V+ P+ G+ DSK+LS ++R L +I+ Sbjct: 5 PLIAGVDEVGRGALFGPVVAAVVVTVPSGFARLWELGVKDSKQLSPQKRQKLSRQIQRDF 64 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMAVVK 124 + +G A EID LNI HA++LAM RA+ L ++P +DG L +P AV++ Sbjct: 65 VC-RIGYATVKEIDRLNIFHASLLAMSRAIGKLPLSPSLCWVDGKHIIKDLSIPQKAVIQ 123 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD + P I+AASI+AKV RD + +P YG A+HKGY TA HLE + +G T HR Sbjct: 124 GDQQSPVIAAASIVAKVWRDDLITRWHRRYPDYGLARHKGYGTAQHLEAIGNYGLTSQHR 183 Query: 185 RSFGPVKRAL 194 SF P + L Sbjct: 184 LSFSPCQPRL 193 >UniRef50_Q7U4C6 Ribonuclease HII n=18 Tax=Cyanobacteria RepID=RNH2_SYNPX Length = 224 Score = 219 bits (559), Expect = 4e-56, Method: Composition-based stats. Identities = 87/194 (44%), Positives = 109/194 (56%), Gaps = 7/194 (3%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIK 62 P + VAGVDEVGRG L G V AV+L+ A GL DSK+LS +RR L I+ Sbjct: 33 PCHRGVAGVDEVGRGCLFGPVFAGAVVLEAANASRLQQEGLTDSKRLSARRRGDLVPLIE 92 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN-RCPKLPMPAMA 121 +A +W LG++ EID L I AT LAM RA+ L PE VL+DGN + Sbjct: 93 HEAEAWGLGQSSTREIDRLGIRPATELAMLRALQRLPNRPELVLVDGNLPLRPWTGEQRS 152 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +V GD I+AAS++AK RDA M L FP YG +H GY TA H L + G + Sbjct: 153 IVAGDQHSLAIAAASVIAKQCRDALMQRLSQRFPGYGLERHAGYGTALHRAALLDLGPSA 212 Query: 182 HHRRSFGPVKRALG 195 HRRSF ++R LG Sbjct: 213 LHRRSF--LRRFLG 224 >UniRef50_D1CBL6 Ribonuclease n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBL6_THET1 Length = 219 Score = 219 bits (559), Expect = 4e-56, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 102/196 (52%), Gaps = 6/196 (3%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG-----LNDSKKLSEKRRLALYEE 60 VAG+DE GRG G V A V+L P + DSK LS RR YE Sbjct: 22 RQGYAYVAGLDEAGRGAWAGPVFGAVVVLPPDLSTLESLAEVVRDSKVLSPNRRELAYEA 81 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 IK AL +G + P EID L I AT LA RA+ + P+ +LID + + + Sbjct: 82 IKASALYIGIGASTPDEIDTLGISRATELAWLRALRDADL-PDVLLIDAFKIRACSINQV 140 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 A+V GD+ I+AAS++AKV RD MA L P + F +HKGY T H ++A +G T Sbjct: 141 AIVDGDALCLSIAAASVVAKVLRDRYMADLTEYVPGFSFHKHKGYGTREHQAEIAIYGVT 200 Query: 181 EHHRRSFGPVKRALGL 196 HRRSF P+ LG Sbjct: 201 PQHRRSFAPISTVLGA 216 >UniRef50_Q1IMM1 Ribonuclease HII n=2 Tax=Acidobacteria RepID=RNH2_ACIBL Length = 254 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 81/183 (44%), Positives = 111/183 (60%), Gaps = 1/183 (0%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 +L+AG+DEVGRG L G VV AAVILDP I GL DSK L + R L + I+E ++ Sbjct: 44 GAKLIAGIDEVGRGALFGPVVAAAVILDPNYRIKGLRDSKLLPAETREILSKRIREHCIA 103 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 WS+ + ID+LNI A+ LAM+ AV GL P+++LID + L ++ GD+ Sbjct: 104 WSIAAVDVARIDQLNIYWASNLAMKHAVRGLSCQPDHLLIDAMKL-DLDCAQTPIIHGDA 162 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASI+AKV RDA + +FP+Y A +KGY H++ L E G + HR+SF Sbjct: 163 LSASIAAASIIAKVHRDALIREWAPIFPEYDLASNKGYSAPKHIKALREFGPSPLHRQSF 222 Query: 188 GPV 190 PV Sbjct: 223 APV 225 >UniRef50_Q4FT93 Ribonuclease HII n=2 Tax=Psychrobacter RepID=RNH2_PSYA2 Length = 287 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 91/227 (40%), Positives = 120/227 (52%), Gaps = 40/227 (17%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILD------------PARPIAGLNDSKKLSEKRRL 55 + L GVDE GRGPL+G+V A+ IL P++ L DSK+LSEK+R Sbjct: 59 GSALQIGVDEAGRGPLLGSVNVASAILPRAWSGLIEAQLLKDTPLSILTDSKQLSEKKRD 118 Query: 56 ALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVA---------------GLHI 100 LY +++ A+ + + ID++NIL ATML M+ +H Sbjct: 119 LLYPLVQQYAIGYIIADIPAAVIDQINILQATMLGMRLCTEILLEVIAHHLNDMAQDIHQ 178 Query: 101 APEYVLIDGNRCPKLPMP-------------AMAVVKGDSRVPEISAASILAKVTRDAEM 147 VL DGNRCP+L A VKGD+R I+AASILAKV+RD M Sbjct: 179 LQTAVLFDGNRCPELNYTSLAQLGIKESMIDCQAWVKGDARHTSIAAASILAKVSRDKTM 238 Query: 148 AALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRAL 194 ALD P+YG A+HKGYPT H+E + +G HRRSF PV++AL Sbjct: 239 YALDTEHPEYGIAKHKGYPTRAHMEAIETYGVLSAHRRSFAPVRKAL 285 >UniRef50_A9H3E2 Ribonuclease HII n=10 Tax=Acetobacteraceae RepID=RNH2_GLUDA Length = 224 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 94/195 (48%), Positives = 115/195 (58%), Gaps = 5/195 (2%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILD---PARPIAGLNDSKKLSEKRRLALYEEIKE 63 H VAGVDEVGRGPL G VV AAV+ D P R + L+DSKKL+E RL Y + Sbjct: 9 QHGGRVAGVDEVGRGPLAGPVVAAAVMFDSGVPRRLVTQLDDSKKLTEAARLRAYAALHA 68 Query: 64 -KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 + + ++ A EI LNIL A LAM+RAVA L P+ VL+DGN P PA V Sbjct: 69 ARGVHIAVAAASVSEIARLNILRAAFLAMRRAVARLPHQPDMVLVDGNAAPDFGCPAQCV 128 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 V GD I+AASI+AKV RD MA L +P YG+ ++ GY TA H L G T H Sbjct: 129 VGGDGESLSIAAASIVAKVVRDRLMARLSCRWPGYGWERNAGYGTAEHRAALCRAGTTPH 188 Query: 183 HRRSFGPVKR-ALGL 196 HR +FG V++ LGL Sbjct: 189 HREAFGLVRQLTLGL 203 >UniRef50_C7MNC1 Ribonuclease n=2 Tax=Coriobacteriaceae RepID=C7MNC1_CRYCD Length = 262 Score = 216 bits (551), Expect = 3e-55, Method: Composition-based stats. Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 6/198 (3%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 ++ + G+DEVGRGPL G + AAV+L A IA LNDSK+LS RR + + Sbjct: 65 LQAQAADGGVSVGLDEVGRGPLAGPLTVAAVVLPEAPHIAHLNDSKQLSASRREEVAAAV 124 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNRCPKLPMP 118 K+ A++WS+ P +ID+ + A RAVA + +A + VL+DGN + Sbjct: 125 KDVAIAWSVQHIAPEDIDDAGMSACLRRAFGRAVAAVETAGVAIDVVLLDGNPL-HFDVR 183 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 +KGD+R+ I+AAS++AKV RD M +P YGF ++KGY +A H+ + ++G Sbjct: 184 ERTFIKGDARLACIAAASVVAKVERDELMTQAAQTYPVYGFDRNKGYGSAEHIAAIKKYG 243 Query: 179 ATEHHRRSF--GPVKRAL 194 HRRSF V+ +L Sbjct: 244 LCPLHRRSFCHSFVQESL 261 >UniRef50_C1SJ31 Ribonuclease n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ31_9BACT Length = 184 Score = 216 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 67/177 (37%), Positives = 100/177 (56%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L+ G+DEVGRG L G VV AV+L L DSKK+SEK+R + ++ A+++ + Sbjct: 2 LIVGIDEVGRGCLAGPVVAGAVLLPENFSDERLVDSKKISEKKRKIMDGVVRANAIAFGI 61 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G +ID I+ T AM A+ + ++ + V++D + + +P K + + Sbjct: 62 GAVSNEDIDRYGIVPCTKKAMMLALEQISVSYDKVIVDAVKLEGVKVPLEHPFKAEDKFQ 121 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ++AASI+AKV RDA M L I P YG+ +KGY H+EK+ E G T HRRSF Sbjct: 122 CVAAASIIAKVYRDALMTKLHINHPDYGWYSNKGYGAKVHIEKIKEIGLTPLHRRSF 178 >UniRef50_D1N706 Ribonuclease n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N706_9BACT Length = 223 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 112/195 (57%), Gaps = 2/195 (1%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 E VAGVDEVGRGPL G VV AAV+ P G+ DSK+L R L EI Sbjct: 20 CECWQEGFCFVAGVDEVGRGPLAGPVVAAAVVFPRGVPWPGVYDSKQLKAADRERLDREI 79 Query: 62 KEK-ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 + + +G EID +NIL+AT AM+ AV +++L+DG LP P+ Sbjct: 80 RSVPGVRIGIGEVPVEEIDRINILNATHRAMREAVLAAG-EVDFILVDGRPVKNLPCPSR 138 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 A+VKGDSR I+AASI+AKV RD M LD+ +P YGF +HKGY TA HLE L G Sbjct: 139 ALVKGDSRSASIAAASIVAKVYRDRLMDELDLRWPGYGFKEHKGYGTAAHLESLRRLGPC 198 Query: 181 EHHRRSFGPVKRALG 195 HR+SF PV+ + Sbjct: 199 PAHRKSFRPVREIID 213 >UniRef50_A3VNV1 Ribonuclease n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VNV1_9PROT Length = 209 Score = 214 bits (547), Expect = 9e-55, Method: Composition-based stats. Identities = 79/182 (43%), Positives = 98/182 (53%), Gaps = 3/182 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL-DPARPIAGLNDSKKLSEKRRLALYEEIK-EKALSWS 69 + G+DE GRG G VV AAVI D L DSK L E RR L++ + + L Sbjct: 19 ICGIDEAGRGAWAGPVVAAAVICGDVKAYPEDLADSKTLREARREHLFDLLSARQDLRVG 78 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP-AMAVVKGDSR 128 +G A EID + + A LAM RAV L P L+DGN P LP P +VKGD Sbjct: 79 VGVASVAEIDRMGVGKANWLAMARAVKALPSPPLGALVDGNYAPALPCPDIRPIVKGDGS 138 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+AASI+AKVTRD M +L P Y ++ +KGYP H L E G + HHR SF Sbjct: 139 CLVIAAASIVAKVTRDRIMRSLCPEHPAYRWSANKGYPAPVHRAALEEIGPSAHHRHSFA 198 Query: 189 PV 190 P+ Sbjct: 199 PI 200 >UniRef50_A8TXS8 Ribonuclease n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXS8_9PROT Length = 222 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 93/194 (47%), Positives = 112/194 (57%), Gaps = 9/194 (4%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKE 63 LV GVDEVGRGP G VV A +LD P A + DSK LS RR Sbjct: 24 EGALVIGVDEVGRGPWAGPVVAGAAVLDLVAMPTHVAALIADSKALSAPRRADALAAFTP 83 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL----HIAPEYVLIDGNRCPKLPMPA 119 A + +LGRAE EID +NIL A++LAM+RAV L P +L+DGNR P P P+ Sbjct: 84 YA-AIALGRAEVEEIDAVNILQASLLAMRRAVDALLATLAGPPALILVDGNRLPHWPHPS 142 Query: 120 MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA 179 A+VKGD+ IS A+I AK+ RDAEMAAL P YG+ ++ GY T H L G Sbjct: 143 RAIVKGDASCLSISVAAIAAKLARDAEMAALAEQHPGYGWERNAGYGTPEHQVALRRLGP 202 Query: 180 TEHHRRSFGPVKRA 193 T HHRRSF PV+ A Sbjct: 203 TIHHRRSFAPVRAA 216 >UniRef50_A8EVA1 Ribonuclease HII n=4 Tax=Epsilonproteobacteria RepID=RNH2_ARCB4 Length = 192 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 4/177 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGPL G +V A VIL I GLNDSK LSEK+R L++EIKEK+ + + Sbjct: 4 LCGIDEAGRGPLAGPLVVAGVIL--LEDIVGLNDSKVLSEKKREKLFDEIKEKS-KYHIV 60 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 ++ IDE I ++ + L L+DGN + + +K D++ + Sbjct: 61 FSDAKLIDEKGISFCLKSSILEIIENLKEFSNSFLMDGNTNFGIQILQK-EIKADAKYAQ 119 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +SAASILAKV+RD M + ++P+Y F +HKGY T H+E + E G ++ HR +F Sbjct: 120 VSAASILAKVSRDRFMDEISPLYPKYDFHKHKGYGTKAHIEAIKEFGRSDIHRHTFK 176 >UniRef50_C2MC66 Ribonuclease n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MC66_9PORP Length = 204 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 83/189 (43%), Positives = 109/189 (57%), Gaps = 2/189 (1%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 ++ + G DE GRG L G + AAVI L DSKKL+ K+R L Sbjct: 3 LLHRYASDGLIECGCDEAGRGALAGDLYAAAVIWPDTLDHPHLRDSKKLTAKQREELRHF 62 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP--MP 118 I+E A +W++G A EI ++NILHA+MLAMQRA+ L PE +LIDGN P + Sbjct: 63 IEEHATAWAVGVATVQEIQQINILHASMLAMQRAIEALSCTPERLLIDGNYYDPRPDEVE 122 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 +VKGD R I+AASILAK RD M + +P YG+ Q+KGYPTA H E + +HG Sbjct: 123 YHTIVKGDDRYLAIAAASILAKTHRDEYMTQQALEYPHYGWEQNKGYPTAQHREGIRQHG 182 Query: 179 ATEHHRRSF 187 + HR+ F Sbjct: 183 SCPLHRQGF 191 >UniRef50_Q7UZZ2 Ribonuclease HII n=7 Tax=Prochlorococcus marinus RepID=RNH2_PROMP Length = 209 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 73/191 (38%), Positives = 109/191 (57%), Gaps = 7/191 (3%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLAL 57 ++ + +++ G+DEVGRG + G V + AV+L + G+NDSKKL+ K+R Sbjct: 14 LQILNKDSEI--GIDEVGRGSVFGPVFSVAVVLSKKSGLTLKKLGVNDSKKLTPKKRKDF 71 Query: 58 YEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL-P 116 + +I + ++LG++ EID L I HAT L+M RAV L P +LIDG +L Sbjct: 72 FPKIIALSSDYALGQSSVREIDLLGIRHATELSMIRAVKKLKHMPSELLIDGPLTLRLWE 131 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 ++ GDS+ I+ ASI+AKV RD+ M L+ +P Y ++KGY T H L + Sbjct: 132 GNQRNIISGDSKFISIATASIIAKVMRDSLMERLESKYPGYFIFKNKGYGTKQHFSSLKK 191 Query: 177 HGATEHHRRSF 187 HG T HR+SF Sbjct: 192 HGLTNLHRKSF 202 >UniRef50_C7PK08 Ribonuclease n=23 Tax=Bacteria RepID=C7PK08_CHIPD Length = 220 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 77/186 (41%), Positives = 106/186 (56%), Gaps = 1/186 (0%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + AG DE GRG L G V AAVIL P LNDSK+L R L E +++ Sbjct: 5 YHQKDIAFEAGCDEAGRGCLAGPVFAAAVILPPKFRNKLLNDSKQLKASDRDKLREVVEK 64 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAV 122 +A+++++ + EID +NIL A+ AM A+ L P Y+L+DGNR P P + Sbjct: 65 EAIAYAVASVDNLEIDRINILKASFRAMHLALDQLKQQPGYILVDGNRFVPYGKTPHACI 124 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD I+AASILAK RD M L +P +G+ ++KGYPT FH + + HG T + Sbjct: 125 VKGDGIYASIAAASILAKTYRDEYMHKLHQEYPHFGWLENKGYPTLFHRDAIRAHGETPY 184 Query: 183 HRRSFG 188 HR++F Sbjct: 185 HRKTFR 190 >UniRef50_C6HV29 Ribonuclease n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HV29_9BACT Length = 195 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 79/184 (42%), Positives = 99/184 (53%), Gaps = 9/184 (4%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPA---RPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 GVDEVGRGPL G VV A V G+ DSK LS RR L I +A S Sbjct: 1 MGVDEVGRGPLAGPVVAACVFFSAPVSRLSRLGIADSKSLSSDRRDELSRLIHTEADHVS 60 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEY-----VLIDG-NRCPKLPMPAMAVV 123 LG + E++ELN+ AT LAM RA+ L V +DG ++ P + + VV Sbjct: 61 LGWSSVDEVNELNVRQATFLAMNRALQQLPPFLMRDSRLCVAVDGRDKIPGVEIQQRTVV 120 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD V ++AASI+AKV RD+ M LD +FP YGFA+HKGY T H + G + HH Sbjct: 121 GGDRTVLSVAAASIVAKVARDSYMEKLDALFPGYGFAKHKGYGTEEHRNAILRLGLSPHH 180 Query: 184 RRSF 187 R F Sbjct: 181 RPLF 184 >UniRef50_D2SE00 Ribonuclease H n=2 Tax=Actinomycetales RepID=D2SE00_9ACTO Length = 257 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 75/187 (40%), Positives = 101/187 (54%), Gaps = 2/187 (1%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP--IAGLNDSKKLSEKRRLALYEEIKE 63 VAG DE GRG G +V AA +L R + GL DSK L+ R +YEE+ + Sbjct: 37 RRGFPAVAGADEAGRGACAGPLVAAACVLPAGRRGRVPGLADSKLLTVAARERVYEEVVD 96 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 +A++WS+ ++D + + A++RAV L +YVL DG P L P +AV Sbjct: 97 RAVAWSVVLLPVADLDARGMHVTNIEALRRAVWALDPGADYVLTDGFPVPGLARPTLAVW 156 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGD ++AAS+LAKVTRD M L +P+Y FA HKGY TA H L +G H Sbjct: 157 KGDRIAACVAAASVLAKVTRDRIMLDLHERWPEYDFAVHKGYSTAAHDAALQRYGPCPEH 216 Query: 184 RRSFGPV 190 R+ F V Sbjct: 217 RKRFVNV 223 >UniRef50_A9BI79 Ribonuclease n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BI79_PETMO Length = 208 Score = 211 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 105/195 (53%), Gaps = 9/195 (4%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGL----NDSKKLSEKRRLALYEEIK 62 + + G+DE GRGPL G V AV+++ + L DSK LS K+R Y +I Sbjct: 11 NKYKKIIGIDEAGRGPLAGPVFVGAVVIESKKEGELLAKIGKDSKSLSPKQRERRYFQIT 70 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNRCPKLPMPA 119 +S + IDE+NI AT LAM + + + + YV+IDG + KL Sbjct: 71 RNFKYYS-NFSTSQLIDEINIFKATELAMIKLLEKIVEENANDYYVIIDG-KFFKLDYNY 128 Query: 120 MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA 179 +VKGD P I AASI+AK RD M L ++P YGF HKGYPT H+E + ++G Sbjct: 129 DCIVKGDQTSPLIGAASIVAKYERDIYMNQLHELYPNYGFITHKGYPTRKHIESIKKYGI 188 Query: 180 TEHHRRSFGPVKRAL 194 HR++F P+KR + Sbjct: 189 ISEHRKTFNPIKRFI 203 >UniRef50_B7FYE5 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FYE5_PHATR Length = 189 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 92/191 (48%), Positives = 121/191 (63%), Gaps = 11/191 (5%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLS-EKRRLALYEEIKE-KALS 67 Q V GVDE GRGPL G VV AA ++ I G+ DSK L+ E R LYE+I + Sbjct: 1 QYVIGVDEAGRGPLAGPVVAAAAVVPID--IVGIADSKTLTRESVREELYEKIVSSDNVR 58 Query: 68 WSLGRAEPHEIDELNILHATMLAMQ---RAVAGLHIAPE---YVLIDGNRCPK-LPMPAM 120 W++ + IDE+NIL AT+ M+ AVAG+ P+ Y L+DGNR PK + M Sbjct: 59 WAVAVIDSARIDEVNILQATLQGMRLAASAVAGISEVPDNAFYALLDGNRLPKKMAMRVE 118 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 +VKGDSR I+AASILAKVTRD M D ++P+Y AQHKGYPTA H++ + ++GA+ Sbjct: 119 TMVKGDSREYSIAAASILAKVTRDRLMHGYDKLYPEYNLAQHKGYPTAAHMDAVRKYGAS 178 Query: 181 EHHRRSFGPVK 191 HRR+F P+K Sbjct: 179 PIHRRTFAPLK 189 >UniRef50_A8SLV4 Ribonuclease n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=A8SLV4_9FIRM Length = 210 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 113/192 (58%), Gaps = 7/192 (3%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 +E +Y L+ GVDEVGRG L G VV+ A+I+ I G+ DSKKLS+K+RLALY++I Sbjct: 7 LENIYKKYNLIIGVDEVGRGCLAGPVVSCAIIMKKDSKIEGVTDSKKLSKKKRLALYDKI 66 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL------HIAPEYVLIDGNRCPKL 115 E+ + + +G + +IDE+NI A+ AM+ A++ + ++ ++++ D + + Sbjct: 67 LEECVGYGIGIVDNVKIDEINIKQASRFAMKIAISNIKDLDGNKVSGDFLITDAEKV-DV 125 Query: 116 PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLA 175 +P + ++ GD +S ASI+AK RD+ + +P Y F ++ GY T H + + Sbjct: 126 DIPQINLIHGDELSYVVSCASIIAKEYRDSMFVEYEKKYPNYNFIKNVGYGTKAHYKGID 185 Query: 176 EHGATEHHRRSF 187 E G T HR +F Sbjct: 186 EFGVTPIHRVTF 197 >UniRef50_A6WW84 Ribonuclease HII n=4 Tax=Rhizobiales RepID=RNH2_OCHA4 Length = 220 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 83/190 (43%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + + + G+DE GRGPL G VV AAV+LD GL+DSK+L+ +R ALYE I E Sbjct: 26 LLARGLKHIVGIDEAGRGPLAGPVVAAAVVLDIDNLPNGLDDSKRLTAVKREALYETILE 85 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMAV 122 KA++ S+ ID +I A + AM+RA GL + P + LIDG P LP P A+ Sbjct: 86 KAITVSVASLSARSIDASDIRKAALEAMRRASVGLTLQPCHALIDGRDVPPGLPCPGSAL 145 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE- 181 VKGD R I+AASI+AKVTRD M P YG H GY T H + G Sbjct: 146 VKGDQRSVSIAAASIVAKVTRDRMMIRAGAAHPPYGLEIHAGYATVKHRAAIETTGPVPG 205 Query: 182 HHRRSFGPVK 191 HR +F P+K Sbjct: 206 IHRYTFAPIK 215 >UniRef50_D1B6E3 Ribonuclease n=2 Tax=Synergistaceae RepID=D1B6E3_THEAS Length = 188 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 91/183 (49%), Positives = 114/183 (62%), Gaps = 5/183 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL--DPARPIA--GLNDSKKLSEKRRLALYEEIKEKALS 67 VAGVDE GRGPL G VV AA +L D AR + GL DSK LS +RR AL+E I+ + Sbjct: 3 VAGVDEAGRGPLAGPVVAAAAVLTRDQARELMALGLKDSKALSPRRREALFEAIRSLNVQ 62 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN-RCPKLPMPAMAVVKGD 126 W A ID ++L A++ AM AV L + P+ VL+DG+ L +P VVKGD Sbjct: 63 WRAQAASWGRIDRTHVLKASLWAMGMAVMALPVRPQLVLVDGSVPIEGLRIPQRCVVKGD 122 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S+VP I AAS++AKV RD M ALD ++PQY FA HKGYPT H L++ G + HRRS Sbjct: 123 SKVPSIMAASVIAKVLRDRVMLALDRLYPQYRFASHKGYPTEEHRRILSQLGPSPVHRRS 182 Query: 187 FGP 189 F Sbjct: 183 FSF 185 >UniRef50_C0A3Z9 Ribonuclease n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A3Z9_9BACT Length = 278 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 85/223 (38%), Positives = 112/223 (50%), Gaps = 38/223 (17%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP--------ARPIAGLNDSKKLSEKR 53 + + H +L+ GVDE GRG L G VV AAV++ A + +NDSK+LS Sbjct: 37 LRNLAGHAELI-GVDEAGRGALAGPVVAAAVLVRRVFLESRWVAHNASRVNDSKQLSAPE 95 Query: 54 RLALYEEIK----EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH--------IA 101 R AL E + E A+ G AE EI++ NIL AT LAM+RA+ +H + Sbjct: 96 RDALAFEFETLAVENAIRVGCGVAEVSEIEQFNILGATKLAMRRALECIHPPEAFQQQVE 155 Query: 102 PEY-----------------VLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRD 144 P+ ++IDG P P + +VKGD+R I+ ASI+AKVTRD Sbjct: 156 PDLFSTEAELAAWRNRVSCRIIIDGLPLKSFPYPHLGIVKGDARSLCIAMASIIAKVTRD 215 Query: 145 AEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + LD P YGFAQHKGY T H E + G HR F Sbjct: 216 RLLTELDARHPGYGFAQHKGYGTEEHREAVLRLGPCVQHRGLF 258 >UniRef50_Q0SPB8 Ribonuclease HII n=18 Tax=Bacteria RepID=RNH2_BORAP Length = 181 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 69/182 (37%), Positives = 108/182 (59%), Gaps = 3/182 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 ++ G+DEVGRG + G +++AAV+ I L+DSKKL++++R L I E + ++ Sbjct: 1 MICGIDEVGRGCIFGPILSAAVVFKKKPNFIKELDDSKKLTKEKREYLSSLILENSY-YA 59 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM-AVVKGDSR 128 G I+++NI +A++LAMQ A L + V IDG PK+ + A++KGDS Sbjct: 60 FGEISNITIEKINIHNASLLAMQTAYENLKLNCNLVFIDGKFVPKISAKNVKAIIKGDSI 119 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 + EI AASI+AKV RD M D ++P Y ++KGYPT H + ++G HR++F Sbjct: 120 IDEIKAASIIAKVKRDKLMDEYDKIYPLYLLKKNKGYPTKEHKNAIKKYGVLSLHRKNFK 179 Query: 189 PV 190 + Sbjct: 180 LI 181 >UniRef50_A6W7V4 Ribonuclease HII n=5 Tax=Actinomycetales RepID=RNH2_KINRD Length = 262 Score = 206 bits (526), Expect = 2e-52, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 114/212 (53%), Gaps = 26/212 (12%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP--IAGLNDSKKLSEKRRLALYEE 60 +F+ LVAGVDEVGRG L G V +++D A GL DSK L+ R AL + Sbjct: 17 QFLRAGHALVAGVDEVGRGSLAGPVSVGVLVVDAATRTAPTGLRDSKLLTPAAREALAPK 76 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR--------- 111 ++ A++ ++G AEP EID + I+ A LA +RA+A L + P+ V++DGN Sbjct: 77 VRRWAVASAVGHAEPGEIDAVGIVAALRLAGRRALAQLPVPPDLVILDGNHDWLSDPREP 136 Query: 112 ------------CPKLPMPAMAV---VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQ 156 LP PA AV VK D ++ AS+LAK TRDA M A FP Sbjct: 137 SLLDALDGLGDPAAGLPCPAPAVTTRVKADVTCAAVAGASVLAKTTRDALMTARHEEFPH 196 Query: 157 YGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 YG+A +KGY HLE LA HGA HRRS+ Sbjct: 197 YGWAGNKGYSAPDHLEALAAHGACPQHRRSWR 228 >UniRef50_B9L043 Ribonuclease n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L043_THERP Length = 219 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 82/182 (45%), Positives = 112/182 (61%), Gaps = 3/182 (1%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG-LNDSKKLSEKRRLALYEEIKEKAL 66 + VAGVDEVGRG L G VV AA I +P+ + L DSK+L++ +R AL + +++ +L Sbjct: 30 GNRWVAGVDEVGRGALAGPVVAAACIFEPSTELPDQLRDSKRLTDPQRRALADWVRQYSL 89 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP-MPAMAVVKG 125 W++G A E+D L I+ AT LAM RA+ L ++VL DG + +P AVV G Sbjct: 90 RWAIGAASHREVDRLGIVRATALAMLRALQRLGP-VDHVLYDGLPLTEFERLPGTAVVHG 148 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D R I+AASILAKV RD MA L + +P YG+ ++ GY T H + E G+T HRR Sbjct: 149 DMRCASIAAASILAKVIRDDLMARLAVRYPGYGWEENAGYGTPSHRRAIRELGSTPFHRR 208 Query: 186 SF 187 SF Sbjct: 209 SF 210 >UniRef50_C8PH70 Ribonuclease n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PH70_9PROT Length = 187 Score = 204 bits (521), Expect = 9e-52, Method: Composition-based stats. Identities = 70/177 (39%), Positives = 99/177 (55%), Gaps = 4/177 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRG L G + A +L R IAGL DSKKLSEKRR LY I E + + + Sbjct: 5 ICGIDEAGRGCLAGPLCVAGCVL--QREIAGLADSKKLSEKRREELYARIIENS-RYKIV 61 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 ++DE + A+++ +A ++ DGN + +VK D+++ E Sbjct: 62 EISSAQVDEAGLSSCLRSALEQILAYFMGFSGQIIYDGNATFGVRGLQ-TLVKADAQIAE 120 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +SAASILAKVTRD M L +PQYGFAQ+KGY + H+ + +G T HR S+ Sbjct: 121 VSAASILAKVTRDRTMNELARRYPQYGFAQNKGYGSRAHIAAIERYGLTPFHRASYK 177 >UniRef50_Q30TX0 Ribonuclease n=4 Tax=Helicobacteraceae RepID=Q30TX0_SULDN Length = 188 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 71/177 (40%), Positives = 102/177 (57%), Gaps = 6/177 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGP+ G +V A IL+ + GLNDSKKL+EK+R ALYE I + + S+ + Sbjct: 5 LCGIDEAGRGPIAGDLVVAGCILNSH--VDGLNDSKKLNEKKREALYEIIIKNS-SYHIV 61 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 + EID+ I A+ + L L DGN + ++K D ++PE Sbjct: 62 KFSAKEIDDNGISICMKKALLEIMKNLTCKE--YLFDGNTNFGIN-NLPTMIKADGKIPE 118 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +SAASILAKVT D + +PQY F +HKGY TA H+E + ++G E HR+S+ Sbjct: 119 VSAASILAKVTHDRNIINDAKKYPQYQFQKHKGYGTALHVEMIKKYGYCEIHRKSYK 175 >UniRef50_A7I0I5 Ribonuclease HII n=7 Tax=Campylobacter RepID=RNH2_CAMHC Length = 185 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 71/176 (40%), Positives = 99/176 (56%), Gaps = 4/176 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGPL G + A IL+ I GL DSKKLSEKRR LYEEI + + + + Sbjct: 3 ICGIDEAGRGPLAGPLHIAGCILNK--QIEGLKDSKKLSEKRREILYEEIIKNST-YKIV 59 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 + +ID+ + L + V ++ DGN +VK D ++ E Sbjct: 60 KFSAAQIDKFGLSKCLKLGLNELVDFFAPFEVKIIFDGNSKFGAEG-FETMVKADDKIKE 118 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 +SAASILAKV+RD M DI FP Y FA++KGY + H+E + ++G E HR+SF Sbjct: 119 VSAASILAKVSRDRVMRNFDIKFPFYDFAKNKGYGSKAHIEAIQKYGYCEIHRKSF 174 >UniRef50_Q67PD4 Ribonuclease HII 1 n=1 Tax=Symbiobacterium thermophilum RepID=RNH21_SYMTH Length = 259 Score = 203 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 78/183 (42%), Positives = 114/183 (62%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + + +AG+DEVGRGPL G VV AAVIL + G+ ++K+LS++RR+ LY I+ Sbjct: 61 QLWSMGYRHIAGIDEVGRGPLAGPVVAAAVILPGEVELPGIEEAKRLSDRRRMELYRRIR 120 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E A++ +G +P IDE +++ AT AM +AVA L + P+Y+LIDG P + P + V Sbjct: 121 EVAVAVGVGLVQPEGIDEASVVVATYKAMMKAVADLPVTPDYLLIDGVHLPNVSQPQVPV 180 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 V G++ I+AA+++AKV RD M +D +P YGFA HKGY T H L +G Sbjct: 181 VGGETLSCSIAAAAVVAKVVRDEYMVEMDAKYPAYGFAHHKGYGTPEHRLALERYGPCPI 240 Query: 183 HRR 185 HR+ Sbjct: 241 HRK 243 >UniRef50_B1ZMV3 Ribonuclease n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMV3_OPITP Length = 261 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 103/213 (48%), Gaps = 37/213 (17%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPAR--------PIAGLNDSKKLSEKRRLALYEEIKE 63 + GVDE GRG L G VV AV++ +NDSK+L+ R L+ E +E Sbjct: 21 LIGVDEAGRGALAGPVVAGAVMVTKEFLEGRWAVTKAGRVNDSKQLTPAMREELWAEFEE 80 Query: 64 KA----LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEY--------------- 104 + + G A+ E+++LNIL AT LAMQRA+ ++ + Sbjct: 81 LVNQGQIHATFGVADVAEVEQLNILGATKLAMQRALEAIYPPSAFQQKTEPDLFTSAEEL 140 Query: 105 ----------VLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVF 154 +L+DG K P P +++ GD+R I+ ASI+AKV RD M L++ Sbjct: 141 AAYQPTVSCRILLDGLAMRKFPYPHHSIISGDARSLCIAMASIVAKVQRDRLMCELELKH 200 Query: 155 PQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 P YGFAQHKGY T H E L G HR F Sbjct: 201 PGYGFAQHKGYGTPEHCEALLRLGRCAQHRDLF 233 >UniRef50_A0JXT5 Ribonuclease HII n=4 Tax=Micrococcaceae RepID=RNH2_ARTS2 Length = 221 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 22/206 (10%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP--IAGLNDSKKLSEKRRLALYEEI 61 F+ +L+AG+DEVGRG + G V ++D +RP + + DSK L E R L + Sbjct: 13 FLSSGARLLAGIDEVGRGAIAGPVTVGITVVDLSRPVLLDDVRDSKLLKESDRERLEPLV 72 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRA---VAGLHIAPEYVLIDGNRC------ 112 + +++ ++G A EID L I+ A A RA + + P+ VL+DG+ Sbjct: 73 RNWSVASAVGHASAGEIDALGIIAALRTAGTRAWLQILAAGVTPDVVLLDGSHNWLSPET 132 Query: 113 -----------PKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQ 161 P P +VK D + ++AASILAKV RD M +L +P +G+ + Sbjct: 133 QASLFDDAPAGPGCDAPVHTLVKADMQCLSVAAASILAKVERDRIMRSLHGEYPAFGWDE 192 Query: 162 HKGYPTAFHLEKLAEHGATEHHRRSF 187 +KGY TA H E L G + +HR S+ Sbjct: 193 NKGYGTASHKEALRAAGPSPYHRVSW 218 >UniRef50_C7MB80 Ribonuclease n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MB80_BRAFD Length = 272 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 106/196 (54%), Gaps = 14/196 (7%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILD-----PARPIAGLNDSKKLSEKRRLALYEEI 61 P +++ GVDEVGRG L G V A ++ A G+ DSKKL+ +RR AL E I Sbjct: 20 PGRRIIVGVDEVGRGALAGPVAVGACAVEVVGGLAAPLPEGVRDSKKLTARRREALVEPI 79 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN--------RCP 113 L+ ++G A P EIDE+ I+ A A RA+ L +A + +++DG+ P Sbjct: 80 LGSVLAGAVGWASPAEIDEIGIMPALTTAALRALDLLGVAADAIVLDGDVDVLTPALTAP 139 Query: 114 KLPMPAMAV-VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLE 172 P P + + V D ++AASILAKV RDA M LD P+Y +A +KGY + H E Sbjct: 140 GRPTPLVHLQVSADRDCASVAAASILAKVARDARMVELDAEAPEYCWASNKGYGSKPHRE 199 Query: 173 KLAEHGATEHHRRSFG 188 + G HHRRS+ Sbjct: 200 AIDRFGVHAHHRRSWR 215 >UniRef50_B3T7B1 Putative Ribonuclease HII n=1 Tax=uncultured marine microorganism HF4000_APKG3D20 RepID=B3T7B1_9ZZZZ Length = 252 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 106/213 (49%), Gaps = 37/213 (17%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILD--------PARPIAGLNDSKKLSEKRRLALYEEIKE 63 + GVDE GRG L G VV A++L R +NDSK+L+E++R L++ I+ Sbjct: 19 IVGVDEAGRGCLAGPVVAGAMLLPTGFFKKASNRRRCVEVNDSKQLNEEQREKLFKTIER 78 Query: 64 KA----LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE---------------- 103 L ++ G A +EI+ NI+ AT +AM+RA+ L E Sbjct: 79 LRDLGELWFTTGEATVNEIESENIVGATCIAMRRAMDALGDKCEGRWGPQDKDEAEGFFA 138 Query: 104 ---------YVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVF 154 VL+DG +LP +VKGD+ ++ ASI AKVTRD M LD + Sbjct: 139 SEIEQSERWIVLVDGKPMKRLPHAHEGLVKGDTLSLGVAMASIAAKVTRDRIMRKLDQSY 198 Query: 155 PQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 P Y FA +KGY + HL L EHG TE HR F Sbjct: 199 PAYDFASNKGYGSPNHLRGLDEHGPTEVHRPRF 231 >UniRef50_A4ECJ3 Ribonuclease n=3 Tax=Collinsella RepID=A4ECJ3_9ACTN Length = 262 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 67/168 (39%), Positives = 94/168 (55%), Gaps = 1/168 (0%) Query: 20 RGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEID 79 RG + G + AV L + G+NDSKKL+ RR L +I E A + P +ID Sbjct: 85 RGSVAGPLTVCAVCLPMEPRVWGINDSKKLTPARRELLSVKIAEVATAIGFCHIAPKDID 144 Query: 80 ELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILA 139 E+ + A A+ AVA + P+ VL+DGN +P VVKGD+++ I+AASI+A Sbjct: 145 EMGMARAIRTAVAGAVADTGLEPDCVLMDGNPLGAVP-NERDVVKGDAKIACIAAASIMA 203 Query: 140 KVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 KVTRD M D +P+Y A+ KGY + H+E + +HG HR SF Sbjct: 204 KVTRDEMMVEYDAEYPEYHLAESKGYASPEHIEAIRKHGLCPLHRVSF 251 >UniRef50_Q6KH21 Ribonuclease n=1 Tax=Mycoplasma mobile RepID=Q6KH21_MYCMO Length = 205 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 93/190 (48%), Gaps = 3/190 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 Y + + DEVGRG L G +V A V L P + DSKKL+ ++R L IKE Sbjct: 17 FYNEFESIIACDEVGRGSLAGPIVVACVNLKPNFFNEKVRDSKKLNPRQREELSILIKEN 76 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIA-PEYVLIDGNRCPKLPMPAMAVV 123 S+ EID LN L AT A + + +L+D + + Sbjct: 77 G-SFHFCYINSKEIDLLNPLEATKKATTSCLNKFEEKGSQIILLDYLSNFSYSKKFINIK 135 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDI-VFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 KGD+ I++ASILAKV RD M L+ F Y F ++KGY T HLE + G ++ Sbjct: 136 KGDNTSFSIASASILAKVERDNFMINLNNDEFDIYDFFKNKGYGTKNHLEAIKIFGPSKI 195 Query: 183 HRRSFGPVKR 192 HR S+ P+K+ Sbjct: 196 HRLSYKPLKK 205 >UniRef50_A7IES2 Ribonuclease HII n=10 Tax=Proteobacteria RepID=RNH2_XANP2 Length = 249 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 92/181 (50%), Positives = 112/181 (61%), Gaps = 1/181 (0%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG DEVGRGPL G VV AAV+LDPAR GL+DSKKL+ +R +LY EI A ++ Sbjct: 54 VAGADEVGRGPLAGPVVAAAVVLDPARVPQGLDDSKKLTRAKRESLYLEICATA-EVAIA 112 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 A P ID NI AT+ A+ AV GL P ++L+DGN P++ A+V GD V Sbjct: 113 LAPPERIDRDNIRQATLWALANAVRGLPCRPAFLLVDGNDPPRVDCEVEAIVGGDGLVAS 172 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASI+AKV RD MA + FP YGF +H GY T H L HG HHRRSF PV+ Sbjct: 173 IAAASIVAKVVRDRLMAGVGAAFPAYGFERHMGYGTREHGAALKAHGPCLHHRRSFAPVR 232 Query: 192 R 192 Sbjct: 233 E 233 >UniRef50_Q8EUA9 Ribonuclease n=1 Tax=Mycoplasma penetrans RepID=Q8EUA9_MYCPE Length = 218 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 2/193 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKL-SEKRRLALYEEIKE 63 + + + G+DEVGRG + G +V VIL+P + DSK + S + R L I + Sbjct: 23 LREKYKNIIGLDEVGRGCIAGPLVVVGVILNPNFFDDRIKDSKLIKSIELRKELKNLILK 82 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 ++S+ + + +D+L A++ M + GL + L D + L P M +V Sbjct: 83 NSISYQIEVVNSNIVDQLGPKQASVKGMTKIANGLINDYDLCLTDFEKIKDLEKPQMNLV 142 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT-EH 182 KGD+ I+ ASI+AK TRD M LD +P Y F H+GY T HL+ + ++G E Sbjct: 143 KGDNTSFTIACASIIAKSTRDDYMEELDNKYPNYLFKNHQGYLTKKHLQLIHQYGPIKEV 202 Query: 183 HRRSFGPVKRALG 195 HR S+ P+K L Sbjct: 203 HRFSYKPIKLILN 215 >UniRef50_C7MY90 Ribonuclease n=3 Tax=Actinomycetales RepID=C7MY90_SACVD Length = 275 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 85/178 (47%), Positives = 104/178 (58%), Gaps = 2/178 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 V GVDE GRG G +V AA +L P + L DSK L+ R +YE I +AL +S Sbjct: 31 VVGVDEAGRGACAGPLVVAACVLRPGDGAKLPELADSKSLTPLARDRVYERILRRALDYS 90 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + P EID + A + M+RAVA L P YVL+DG R P LP P++ V+KGD V Sbjct: 91 IVVIPPAEIDVQGVHTANIEGMRRAVAALSQRPGYVLLDGFRVPGLPAPSVPVLKGDRAV 150 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ++AAS+LAKVTRD M L +P YGF HKGY T H LAEHG E HR SF Sbjct: 151 ACVAAASVLAKVTRDRIMVGLHAEYPVYGFEVHKGYTTVEHRTALAEHGPCEAHRWSF 208 >UniRef50_Q04SW6 Ribonuclease n=4 Tax=Leptospira RepID=Q04SW6_LEPBJ Length = 223 Score = 198 bits (505), Expect = 8e-50, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 102/205 (49%), Gaps = 20/205 (9%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD--------PARPIAGLNDSKKLSEKRR 54 E+ + + G+DE GRGP G + A V + + GL DSKKLSEK+R Sbjct: 13 EYRFYSESIPCGIDEAGRGPYAGPLSVALVSFSQNTLHQILEGKLLKGLTDSKKLSEKKR 72 Query: 55 LALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQR----AVAGLH-IAPEYVLIDG 109 ALY EI + A P+ ID I A + +++ A+ G+ P +LIDG Sbjct: 73 EALYPEILKIAQISCQTFLSPNYIDREGINRAVLEGIRKCAKMAIRGVSSTLPLQLLIDG 132 Query: 110 NRCPK-------LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQH 162 N + KGD R+ I+AASILAKV+RD M ++ +P Y F +H Sbjct: 133 NYNFNRYPEWNYFKNRSSFYTKGDLRIVSIAAASILAKVSRDRYMTSISKKYPDYRFDRH 192 Query: 163 KGYPTAFHLEKLAEHGATEHHRRSF 187 KGY T H E + +G ++ HRRSF Sbjct: 193 KGYGTKLHEELILRYGLSDIHRRSF 217 >UniRef50_C7R325 Ribonuclease n=2 Tax=Micrococcineae RepID=C7R325_JONDD Length = 303 Score = 197 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 101/208 (48%), Gaps = 26/208 (12%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA--GLNDSKKLSEKRRLALYEEIKEK 64 +LVAGVDEVGRG L G V ++DP + GL DSK+LS + R L I+ Sbjct: 82 RGARLVAGVDEVGRGALAGPVAVGVCVVDPTTQLPPVGLTDSKELSHEARALLVPMIQGW 141 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIA---PEYVLIDGNR---------- 111 A++ ++G A P EIDE I+ A LA QRA+ + + VL+DG+ Sbjct: 142 AVASAVGLATPEEIDECGIVGALRLAGQRALGEIMQRLGPVDTVLLDGSHNWLSEPVQDL 201 Query: 112 ----------CPKLPMP-AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA 160 P + VK D ++ ASILAK RDA M LD FP YG+ Sbjct: 202 FDAVTSDQQTIDGYEEPRVVTRVKADLACASVAGASILAKEHRDAIMRELDHDFPHYGWV 261 Query: 161 QHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +KGY ++ H L G T HHR S+ Sbjct: 262 TNKGYASSGHTYALTTRGPTPHHRMSWR 289 >UniRef50_B0S8P2 Ribonuclease n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S8P2_LEPBA Length = 246 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 94/211 (44%), Gaps = 31/211 (14%) Query: 16 DEVGRGPLVGAVVTAAVILDP--------ARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 DE GRG L G V V + L DSKK+ E +R L EI + A Sbjct: 28 DEAGRGTLAGPVSVGCVSFSSQTLEKIQSGTILKNLRDSKKIPEPKRFELRTEILQYAAY 87 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAV-------------AGLHIAPE-------YVLI 107 W + ID NI A + RA+ G+ + + ++ + Sbjct: 88 WHVSFVSAKFIDRFNINQAIFYGISRALPVNPRQVTGHLHKTGIPLGTQTKETLAPFLFV 147 Query: 108 DGNRCPKLPMP---AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKG 164 DGN K+ P +++ KGD VP ISAASILAK RD M +D +P YGFA+HKG Sbjct: 148 DGNYKLKIHKPIEGYLSIPKGDDLVPSISAASILAKTYRDEYMEKMDAKYPGYGFAKHKG 207 Query: 165 YPTAFHLEKLAEHGATEHHRRSFGPVKRALG 195 Y T H E L + G + HR SF R G Sbjct: 208 YGTEEHREALRKLGISPIHRLSFCNFLRREG 238 >UniRef50_A4S5U9 Ribonuclease (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5U9_OSTLU Length = 189 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 82/178 (46%), Positives = 112/178 (62%), Gaps = 3/178 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK-EKALSWSL 70 V GVDE GRGPL G VV AA + + +NDSK+L+E+ R ++EE+ K + + + Sbjct: 13 VVGVDEAGRGPLAGPVVAAACFVPKDCVVDCVNDSKQLTEEGREEIFEELMANKDIEYGV 72 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSRV 129 + IDE+NIL TM AM R+ A + ++VLIDGNR PK L A A+VKGD++ Sbjct: 73 CVIDQDRIDEINILECTMEAMHRSAADVP-NVDWVLIDGNRVPKPLEGKAEAIVKGDAKN 131 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASI+AKVTRD M +D FP YGF HKGY T H+ + +HG +HR++F Sbjct: 132 VAIAAASIIAKVTRDRMMLEIDKEFPMYGFKDHKGYGTKAHMAAIDKHGPCVYHRKTF 189 >UniRef50_B9L797 Ribonuclease n=3 Tax=Epsilonproteobacteria RepID=B9L797_NAUPA Length = 196 Score = 196 bits (498), Expect = 4e-49, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 98/187 (52%), Gaps = 14/187 (7%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARP----------IAGLNDSKKLSEKRRLALYEEI 61 + G+DE GRGP+ G +V A I + + LNDSKKL+ K+R L+E I Sbjct: 5 ICGIDEAGRGPIAGPLVVAGCIFKNEKLKVKSEKWENFLQKLNDSKKLNAKKREELFEII 64 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 +E + + + IDE + A A+ L L DGN + Sbjct: 65 QET-CEYHIVFVDNKTIDEKGLSFAINYALNEIKKTLKANK--YLFDGNSNFGVKG-IET 120 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++KGD ++ +ISAASILAKV+RD M + +P Y F +HKGY T H+E++ ++G ++ Sbjct: 121 LIKGDGKIKQISAASILAKVSRDKYMLEIADKYPMYNFKKHKGYITKEHIEEIKKNGFSD 180 Query: 182 HHRRSFG 188 HR+S+ Sbjct: 181 IHRKSYR 187 >UniRef50_A5FW78 Ribonuclease HII n=3 Tax=Alphaproteobacteria RepID=RNH2_ACICJ Length = 199 Score = 195 bits (496), Expect = 7e-49, Method: Composition-based stats. Identities = 88/183 (48%), Positives = 112/183 (61%), Gaps = 3/183 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAG---LNDSKKLSEKRRLALYEEIKEKALS 67 +VAGVDEVGRGPL G VV AA IL P ++DSK+LS +R A + E + Sbjct: 13 VVAGVDEVGRGPLAGPVVAAAAILPADLPPEIAALIDDSKRLSPAQREAALAALIESGAA 72 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 S A EI LNIL A++LAM+RAVA L + P++VL+DG P LPMP VV GD Sbjct: 73 ISAAAASVAEIARLNILQASLLAMRRAVARLAVRPDHVLVDGQVAPDLPMPCTPVVGGDG 132 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASI AK+ RD M+ LD +P YG+A++ GY T H + + G T HHRR F Sbjct: 133 LSLSIAAASIAAKLVRDRAMSRLDRRYPGYGWARNSGYGTKTHRDAILGLGITPHHRRGF 192 Query: 188 GPV 190 GP+ Sbjct: 193 GPL 195 >UniRef50_C8WAJ0 Ribonuclease n=2 Tax=Atopobium RepID=C8WAJ0_ATOPD Length = 257 Score = 195 bits (496), Expect = 8e-49, Method: Composition-based stats. Identities = 79/186 (42%), Positives = 106/186 (56%), Gaps = 1/186 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 + + LV GVDEVGRG + G + AV L I GLNDSKKL+ +R L E+I Sbjct: 62 FQKEFSGGGLVVGVDEVGRGSVAGPLTVCAVCLPDEPIIYGLNDSKKLTATKREILAEQI 121 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 +E A + + P IDE+ + AM +AV I P+ VLIDGN + Sbjct: 122 QEVATAIGIAHISPQRIDEVGMAQCLRDAMLQAVKNTGIEPDCVLIDGNPM-HIHPKEKT 180 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +VKGD+R+ I+AASI+AKVTRDA M A D +P Y A+ KGY +A H++ + E G + Sbjct: 181 LVKGDARIASIAAASIVAKVTRDALMVAYDEEYPGYYLAECKGYASAEHIKAIGEKGLSP 240 Query: 182 HHRRSF 187 HR SF Sbjct: 241 IHRASF 246 >UniRef50_B8HA90 Ribonuclease n=2 Tax=Arthrobacter RepID=B8HA90_ARTCA Length = 260 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 101/207 (48%), Gaps = 22/207 (10%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVT--AAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 F + +AGVDEVGRG L G V A V L+ +P+AG+ DSK L R L + Sbjct: 38 FKAQGVRFLAGVDEVGRGALAGPVSVGIAVVDLERQKPLAGVRDSKLLRATERERLEPLV 97 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRA---VAGLHIAPEYVLIDGNRCPKLPM- 117 + +++ ++G A HEID L I+ A LA RA + + P+ VL+DG+ P Sbjct: 98 RRWSVASAVGHASAHEIDALGIIAALRLAGTRAWQDILAAGVIPDMVLLDGSHNWLSPAE 157 Query: 118 ----------------PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQ 161 P VK D + ++AAS++AKV RD M L +P +G+ Sbjct: 158 QLSLFDQEAPEAACDAPVHTKVKADMQCLSVAAASVIAKVERDRTMRELHAEYPDFGWDI 217 Query: 162 HKGYPTAFHLEKLAEHGATEHHRRSFG 188 + GY T H + L G T +HR S+ Sbjct: 218 NNGYATVLHRDVLRAAGPTPYHRVSWR 244 >UniRef50_Q9ZJR1 Ribonuclease HII n=15 Tax=Helicobacteraceae RepID=RNH2_HELPJ Length = 209 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 8/194 (4%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLALYEEIKEKA 65 + G+DE GRG L G++ A V+ + + GL DSKKLS K+R L ++IK Sbjct: 5 SMTLGIDEAGRGCLAGSLFVAGVVCNEKIALEFLKMGLKDSKKLSPKKRFFLEDKIKTHG 64 Query: 66 -LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPA---MA 121 + + + + +EID L + LA++ V + IDGN L Sbjct: 65 EVGFFVVKKSANEIDHLGLGACLKLAIEEIVENGCSLANEIKIDGNTAFGLNKRYPNIQT 124 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++KGD + +I+ AS+LAK ++D EM L +F +YG+ ++ GY T H+E + + GAT Sbjct: 125 IIKGDETIAQIAMASVLAKASKDREMLELHALFKEYGWDKNCGYGTKQHIEAINKLGATP 184 Query: 182 HHRRSFGPVKRALG 195 HR SF R L Sbjct: 185 FHRHSFTLKNRILN 198 >UniRef50_C5LZG5 Ribonuclease n=5 Tax=Eukaryota RepID=C5LZG5_9ALVE Length = 630 Score = 192 bits (488), Expect = 6e-48, Method: Composition-based stats. Identities = 84/198 (42%), Positives = 113/198 (57%), Gaps = 16/198 (8%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIA-GLNDSKKLS-EKRRLALYEEIKE-KAL 66 +V GVDE GRGPL G VV AAV ++ I G+ DSK +S E+ R +YE++ K + Sbjct: 8 DIVIGVDEAGRGPLCGPVVAAAVYINQDTYIPYGICDSKTISNEEYRDMMYEQLTNNKGV 67 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGL------HIAPEYVLIDGNRCPK------ 114 WS+G + ID +NIL AT A AV L + +VLIDGNR P Sbjct: 68 KWSVGIVDNKVIDTINILQATFTAKTEAVLKLTKDGEGRKSKYHVLIDGNRVPPQLLNNN 127 Query: 115 -LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEK 173 + + +VKGDS+ I+AASI+AKVTRD M + PQY +QHKGYPT H+ Sbjct: 128 NINLQCTPIVKGDSKEYIIAAASIIAKVTRDRIMHHIHNNIPQYNVSQHKGYPTTAHIAL 187 Query: 174 LAEHGATEHHRRSFGPVK 191 L G +++HR +F P+K Sbjct: 188 LKRLGPSKYHRLTFAPLK 205 >UniRef50_Q13BU3 Ribonuclease HII n=19 Tax=Bacteria RepID=RNH2_RHOPS Length = 298 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 88/182 (48%), Positives = 107/182 (58%), Gaps = 1/182 (0%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG DE GRGPL G VV AAV+LDP R GL+DSK+L+ RR L+EEI A ++ Sbjct: 87 VAGCDEAGRGPLAGPVVAAAVVLDPKRVPKGLDDSKRLTADRREELFEEICATA-QVAVA 145 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 A P I+ NIL A++ A+ RAV L P++V +DG + AVV GD + Sbjct: 146 YASPERINRDNILRASLWALTRAVHALPDLPQHVFVDGRDRLATRCESEAVVGGDGLIAS 205 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 I+AASI+AKV+RD M L P YGF HKGY HL LA G T HHRR F PV Sbjct: 206 IAAASIIAKVSRDRLMCRLAQECPGYGFESHKGYGVPEHLAALARLGPTVHHRRFFAPVA 265 Query: 192 RA 193 A Sbjct: 266 AA 267 >UniRef50_Q3XZB5 Ribonuclease n=1 Tax=Enterococcus faecium DO RepID=Q3XZB5_ENTFC Length = 151 Score = 191 bits (487), Expect = 9e-48, Method: Composition-based stats. Identities = 63/151 (41%), Positives = 89/151 (58%), Gaps = 4/151 (2%) Query: 44 NDSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE 103 N+ ++ SE + K+K L+ +G + ID++NI A+ LAM +AV L I P Sbjct: 4 NNYQRKSEN---FFINKFKKKPLAIGIGIVDQQTIDDVNIYEASKLAMIQAVEKLSIVPS 60 Query: 104 YVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHK 163 Y+LID LP+ ++KGD+R I+AASI+AKV RD M D+++P YGF+ + Sbjct: 61 YLLIDAMTL-DLPIQQEKIIKGDARSVSIAAASIIAKVYRDQLMKEYDVLYPGYGFSHNA 119 Query: 164 GYPTAFHLEKLAEHGATEHHRRSFGPVKRAL 194 GY T HLE L G T HR+SF PVK+ L Sbjct: 120 GYGTKEHLEGLERQGITPIHRKSFAPVKKYL 150 >UniRef50_B6BTW0 Ribonuclease n=1 Tax=beta proteobacterium KB13 RepID=B6BTW0_9PROT Length = 179 Score = 189 bits (480), Expect = 7e-47, Method: Composition-based stats. Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 2/178 (1%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGR 72 G+DEVGRG + G VV AAV++D + + ++DSK LS KRR +L +EIK+K + +S+ Sbjct: 3 IGIDEVGRGCVAGPVVAAAVVIDESFDVL-VSDSKLLSAKRRESLDKEIKKKCVDFSISV 61 Query: 73 AEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEI 132 +DE+NI A++LAM++A L + DG PK+ A+A V GD EI Sbjct: 62 INSKIVDEINIHKASLLAMEQAYINLCHQSGSIKCDGKFTPKIDG-AVAHVNGDKLYTEI 120 Query: 133 SAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 SAASI+AKV RD M + + +P Y F +HKGY T HLE + ++G HR +F P Sbjct: 121 SAASIIAKVYRDHLMNYISLKYPDYHFDKHKGYLTKLHLEAIEQYGPCNIHRLTFKPF 178 >UniRef50_B1LVZ9 Ribonuclease n=9 Tax=Alphaproteobacteria RepID=B1LVZ9_METRJ Length = 232 Score = 188 bits (479), Expect = 7e-47, Method: Composition-based stats. Identities = 77/179 (43%), Positives = 97/179 (54%), Gaps = 7/179 (3%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGL----NDSKKLSEKRRLALYEEIKEKALSW 68 G DEVGRG L G VV AAV DP L +DSK++ E R L I+ A Sbjct: 52 IGCDEVGRGALCGPVVVAAVWFDPTAIPPDLLAALDDSKRVPEPVRERLAPLIRAHARV- 110 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 ++ ID +NI AT+ AM RAVA L +A VL+DG +P AV+ GD Sbjct: 111 AVAAGSRALIDRINIRGATLDAMARAVARLGLAAP-VLVDGRDALP-GLPGRAVIGGDHL 168 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 VP+I+AASI+AKV RD M L P YG+ ++ GY TA H L + G + HHR SF Sbjct: 169 VPQIAAASIVAKVLRDQLMRRLARRHPGYGWERNVGYGTAVHRAGLTQLGRSAHHRLSF 227 >UniRef50_A7H1A3 Ribonuclease HII n=16 Tax=Campylobacter RepID=RNH2_CAMJD Length = 191 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 5/177 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRG L G ++ AA L+ + GL DSKKLSEK+R LYE I + + ++ + Sbjct: 18 LIGIDEAGRGALAGPMMMAACKLNK--KLDGLCDSKKLSEKKREELYEIIIKNS-NYLIL 74 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 +ID L + ++ ++ DGN + +K D+ + + Sbjct: 75 AFSSEQIDTLGLSTCLKTGLKLIKKHFKAENNFLY-DGNTNLGING-IKTQIKADTSILQ 132 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +SAASILAKV++D M L FP Y F ++K Y T H E +A+ G + HR+SF Sbjct: 133 VSAASILAKVSKDKVMNFLAKDFPCYEFEKNKAYGTKAHKEVIAKFGICKLHRKSFK 189 >UniRef50_UPI000051041B ribonuclease HII n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051041B Length = 243 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 105/217 (48%), Gaps = 32/217 (14%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD-----PARPIAGLNDSKKLSEKRRLALY 58 + + V GVDEVGRG L G V + D A AG++DSK+LS R Sbjct: 15 LLAEGYEFVIGVDEVGRGALAGPVSVGVALFDLREVTAAEVPAGIHDSKQLSALSRQTAT 74 Query: 59 EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHI---------APEYVLIDG 109 + + A + S+G P+E+DEL + A LA +RA++ + + +L+DG Sbjct: 75 DRVNGWARATSVGSTTPNELDELGMTMALNLAGRRALSEMLLECVGSTDFPPSTMILLDG 134 Query: 110 NR-----------------CPKLPMPA-MAVVKGDSRVPEISAASILAKVTRDAEMAALD 151 L +P V+KGD VP I+AASI+AKV RD EM AL Sbjct: 135 KHDWLSAPLTLDCLGIFGDAADLQLPQVRTVIKGDGSVPVIAAASIVAKVQRDEEMIALA 194 Query: 152 IVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 PQYG+ + GY T H +A+ G + HHRRSF Sbjct: 195 KANPQYGWQSNVGYGTMKHRRGIADFGPSIHHRRSFR 231 >UniRef50_B4U9C0 Ribonuclease n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9C0_HYDS0 Length = 213 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 98/193 (50%), Gaps = 15/193 (7%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD--------PARPIAGLNDSKKLSEKRR 54 +F+ L A VDE GRG L G +V A+++D I G DSKKL E R Sbjct: 24 QFLKRGLTL-ACVDEAGRGALAGPLVVGAILVDNLDIFFEEEYTLIKG--DSKKLKEADR 80 Query: 55 LALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK 114 ++ IK+ +S+G A EID+ I AT +AM+RA+ L + VL D Sbjct: 81 FWAFDTIKKY-FKYSVGIATHQEIDDFGITKATKMAMKRALEALKGF-DIVLSDFINLED 138 Query: 115 LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKL 174 + +VKGD + I AS++AK TRD M F + F +HKGY T H++++ Sbjct: 139 YDC--IPIVKGDEKSFSIRLASLVAKATRDKMMIDYASSFKPFSFDKHKGYGTKEHIKEI 196 Query: 175 AEHGATEHHRRSF 187 + G + HRRSF Sbjct: 197 KDFGLSSIHRRSF 209 >UniRef50_A4J2Z7 Ribonuclease n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2Z7_DESRM Length = 355 Score = 179 bits (454), Expect = 6e-44, Method: Composition-based stats. Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 3/175 (1%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGL-NDSKKLSEKRRLALYEEIKEKALSWSLG 71 AG+DEVG + G +V A V+L I G+ DSK+++ K + I EKA W + Sbjct: 89 AGIDEVGVSSIAGPMVAAVVVLPHDHNIPGIPRDSKEMTLKSIEEISSLIFEKADFWHIA 148 Query: 72 RAEPHEIDELNI-LHATMLAMQRAVAGLHIAPE-YVLIDGNRCPKLPMPAMAVVKGDSRV 129 P EID++ L L M+ A + P+ +++DG AV KGDS Sbjct: 149 SISPKEIDDIGPELAREKLWMECANKVRSVFPKIRIIVDGKDKIPGFTKQNAVSKGDSIF 208 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 +SAA+I+AK D EM L +PQY F+++KGYP H + +G HR Sbjct: 209 SGVSAAAIVAKQYCDNEMRILHNYYPQYNFSKNKGYPVYEHYVAIKNYGICPSHR 263 >UniRef50_C8WGY3 Ribonuclease n=3 Tax=Coriobacteriaceae RepID=C8WGY3_EGGLE Length = 262 Score = 177 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 70/180 (38%), Positives = 106/180 (58%), Gaps = 4/180 (2%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 ++ G+DEVGRGPL G + AV+L I GLNDSK++ + R + ++K A++W++ Sbjct: 74 VIVGLDEVGRGPLAGPLAVGAVVLPSEPFIEGLNDSKQVKPEARERIAVQVKAVAVAWTV 133 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 E +ID + + LA +RA+ + + P+ VL+DGN +L + VVKGD Sbjct: 134 EYVEASDIDACGMTASLALAFRRAIRRIEEAGVRPDVVLLDGNPM-RLDEREVNVVKGDG 192 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + I+AASI+AKV RDA M +P+YGF KGY +A H+E + +G T HR +F Sbjct: 193 KCASIAAASIVAKVERDALMCRYAEEYPEYGFDACKGYASAAHIEAIKRYGLTPIHRATF 252 >UniRef50_UPI000197799D ribonuclease HII n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI000197799D Length = 239 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 52/229 (22%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL-DPARPIAGLNDSKKLSEKRRLALYEEIKEKA----L 66 +AG+DE GRG + GA+ A VI + G DSKKLS K+R +Y+ + E + Sbjct: 3 LAGIDEAGRGCICGALFVAGVIGREENIAHFGAKDSKKLSPKQRERIYQTLLESQHKGEI 62 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEY---------------------- 104 + + E EID+ + A +++ + + Sbjct: 63 GLFVAQIEAWEIDKFGLSIAMKNGIEQILCRIADFATLQNLIGQNVEQNTAKHNLLEQDV 122 Query: 105 ----------------VLIDGNRCPKLPMPAM---------AVVKGDSRVPEISAASILA 139 +++DGN + +P + +VK D +P +S ASI+A Sbjct: 123 EQNPTDSTDSKNALQEIIMDGNTTFQAKIPHILTQSGVGVQTLVKADDIMPIVSCASIVA 182 Query: 140 KVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 KV++D +M LD ++PQY A++KGY T H + +A++G HHR+SF Sbjct: 183 KVSKDRQMHELDKLYPQYFLAKNKGYGTLQHKKAIAKNGYCPHHRKSFK 231 >UniRef50_B5Y443 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y443_PHATR Length = 194 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 17/195 (8%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPAR----PIAGLNDSKKLSEKRRLALYEEIKEKALS 67 V G DE G G + G VVTA+ + I G++DSK LS K R +YE I + Sbjct: 1 VIGSDESGSGCIAGPVVTASCCVRDNAADGLWIDGVDDSKSLSTKDRERIYEAIVQNPSR 60 Query: 68 --WSLGRAEPHEIDELNILHATMLAMQRAVAGL---------HIAPEYVLIDGNRCPKLP 116 WS+ EIDE + +AT+ Q ++ + H P Y ++DG+R PK+ Sbjct: 61 YLWSIQERSAAEIDEQSATNATLNCFQDSIEDVVSQLRAEYPHCQP-YSIVDGHRSPKVD 119 Query: 117 -MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLA 175 + +GD+ V ++ ASILA+VTRD MA + +P Y F ++ GYP+ H E L Sbjct: 120 GCTSRPWKQGDAYVYTVALASILARVTRDRHMALAAVKYPLYDFDRNGGYPSRAHTEILH 179 Query: 176 EHGATEHHRRSFGPV 190 +HG + HR+S PV Sbjct: 180 QHGYSPIHRQSCKPV 194 >UniRef50_B1VXS2 Ribonuclease HII n=10 Tax=Actinomycetales RepID=RNH2_STRGG Length = 236 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 72/185 (38%), Positives = 98/185 (52%), Gaps = 4/185 (2%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 + VAGVDEVGRG G V A + RP GL DSK L+ +RR L ++ + Sbjct: 19 GARTVAGVDEVGRGAWAGPVTVCAAVTGLRRPPEGLTDSKLLTPRRRAELDPVLRSWVTA 78 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKGD 126 ++LG A P EID+L + A LA RA+ GL + P+ V++DG +P V+KGD Sbjct: 79 YALGDASPQEIDDLGMTAALRLAAVRALEGLPVRPDAVILDGKHDYLGVPWKVRTVIKGD 138 Query: 127 SRVPEISAASILAKVTRDAEMAAL---DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 ++AAS++AKV RD MA L + F + GYP+ H L E G T HH Sbjct: 139 QSCIAVAAASVIAKVHRDRMMAELGAASEDCADFDFGANAGYPSPVHRAALEERGPTAHH 198 Query: 184 RRSFG 188 R S+ Sbjct: 199 RLSWA 203 >UniRef50_Q82KF0 Ribonuclease HII n=15 Tax=Actinomycetales RepID=RNH2_STRAW Length = 233 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 78/182 (42%), Positives = 103/182 (56%), Gaps = 1/182 (0%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 +++AGVDEVGRG G V A I RP GL DSK L+ KRR L EE+++ S Sbjct: 19 GAKVIAGVDEVGRGAWAGPVTVCAAITGLRRPPEGLTDSKLLTVKRRTVLAEELRKWVTS 78 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKGD 126 ++LG A P EID L + A LA RA+ L + P+ V++DG P V+KGD Sbjct: 79 YALGHASPEEIDALGMTAALRLAAVRALEALPVRPDAVILDGKHDYLGSPWKVRTVIKGD 138 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 ++AAS++AKV RD MA L I +GFA + GYP+ H LAE G T +HR S Sbjct: 139 QSCVAVAAASVIAKVQRDKMMAELGIEHADFGFAANAGYPSPVHKAALAERGPTPYHRLS 198 Query: 187 FG 188 + Sbjct: 199 WA 200 >UniRef50_C7LXT7 Ribonuclease n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LXT7_ACIFD Length = 200 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 81/192 (42%), Positives = 99/192 (51%), Gaps = 9/192 (4%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDP-------ARPIAGLNDSKKLSEKRRLALY 58 P + G+DEVGRG G VV A A P G+ DSK LS R A Sbjct: 4 QPSGDRLVGIDEVGRGAWAGPVVVGAARGSVAAAAAILAHPRGGVRDSKALSPAAREAAL 63 Query: 59 EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP 118 ++ L ++G A EID+L + A LA RA+ VL+DG Sbjct: 64 GALEAAGLELTVGSASAREIDKLGLTGALRLAAHRALGAASELE--VLLDGRVPYVEAGR 121 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 +V GD R P I+AASI+AKV RDA M ALD + YGFA+HKGY TA H L+EHG Sbjct: 122 VHCIVGGDRRHPLIAAASIVAKVRRDAFMVALDELAAGYGFARHKGYGTAEHRRALSEHG 181 Query: 179 ATEHHRRSFGPV 190 T HRRSFGP+ Sbjct: 182 VTPWHRRSFGPI 193 >UniRef50_C3XGM9 Ribonuclease n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGM9_9HELI Length = 207 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 10/186 (5%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDP----ARPIAGLNDSKKLSEKRRLALYEEI----K 62 L+ G+DE GRG + G++ A+V+LD + + DSK+L++ +R + I + Sbjct: 13 LICGIDEAGRGCVAGSLFIASVMLDECYFESFKKLDIRDSKQLTQTQRQERADSIQEFLR 72 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH-IAPEYVLIDGNRCPKLPMPAMA 121 E + + ID + + ++ + + ++ DGN + Sbjct: 73 EHGGRVKIVSFDSVNIDSKGLGQCMQMGLKELLLHAKKHQCKSIIFDGNTNFGV-QEIDT 131 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++KGDS+ ISAASILAK +D+EM L ++PQY +KGY T H+E +A+HG + Sbjct: 132 LIKGDSKHVLISAASILAKTNKDSEMLTLHDLYPQYNLKSNKGYLTKAHIESIAKHGYSP 191 Query: 182 HHRRSF 187 HR+S+ Sbjct: 192 IHRKSY 197 >UniRef50_D2NTN7 Ribonuclease HII n=2 Tax=Rothia mucilaginosa RepID=D2NTN7_9MICC Length = 278 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 106/230 (46%), Gaps = 45/230 (19%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA--GLNDSKKLSEKRRLALYEE 60 + + VAG+DEVGRG + G V IL P + GL DSK LS RR ++ E Sbjct: 34 QLFASGARTVAGIDEVGRGSMAGPVTVGVAILTPDATLEVGGLIDSKALSPARRESMVPE 93 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNRCPKLP- 116 I++ + ++G EP +ID L + + LA QRA+A L + L+DG P Sbjct: 94 IRQW-CAVAVGHVEPADIDRLGMTLSLRLAAQRALAELARRGYRADAALLDGKHDWFTPP 152 Query: 117 --------------------------------------MPAMAVVKGDSRVPEISAASIL 138 MP V+KGD + I+AAS++ Sbjct: 153 QEDLFSALAPDPAQAHYNALLAQAWEGAGEGGAGEPAQMPVTMVIKGDYKCASIAAASVV 212 Query: 139 AKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 AKV RD M LD +P YG+A++KGY +A H E ++ G + HR S+ Sbjct: 213 AKVERDELMVQLDTRYPGYGWAKNKGYGSAAHREAISVQGPSPQHRLSWS 262 >UniRef50_Q7VK86 Ribonuclease n=1 Tax=Helicobacter hepaticus RepID=Q7VK86_HELHP Length = 207 Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 25/202 (12%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPI-AGLNDSKKLSEKRRLALYEEI----KEKAL 66 VAG+DE GRG + G + A +I + G DSKK+ K+R+ +Y + K + Sbjct: 3 VAGIDEAGRGCICGGLFIAGIIANEQVIAQFGAKDSKKMLPKQRVRVYNALLDSQKRGEI 62 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLH-----------IAPEYVLIDGNRCPKL 115 + + + + +ID+ + A ++ ++ L P ++IDGN Sbjct: 63 GFYVAQIQAWDIDKYGLSWAMRSGIEEVLSYLGSYMLEQNILVQNQPLDIVIDGNTTFGA 122 Query: 116 PMPA---------MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP 166 +P ++KGD +P IS AS++AKV++D++M LD ++PQY A++KGY Sbjct: 123 HIPTFLAHKDVHLKTLIKGDELMPIISCASVVAKVSKDSQMYMLDNLYPQYLLAKNKGYA 182 Query: 167 TAFHLEKLAEHGATEHHRRSFG 188 T H +++ +G HHR+SF Sbjct: 183 TLEHKKQIMRYGYCPHHRKSFK 204 >UniRef50_B6YVT5 Ribonuclease HII n=10 Tax=Euryarchaeota RepID=RNH2_THEON Length = 227 Score = 168 bits (427), Expect = 9e-41, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 28/206 (13%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLALYEEIKEKALS 67 +AG+DE GRGP++G +V AAV++D G+ DSKKL+ KRR L++EI + Sbjct: 3 LAGIDEAGRGPVLGPMVIAAVVVDEGNVPKLEELGVKDSKKLTPKRRERLFDEIVQLLDD 62 Query: 68 WSLGRAEPHEIDELN--ILHATMLAMQRAVAGLHIAPEYVLIDGNRCP------------ 113 + + P EID + + +A+ L + P+ V ID Sbjct: 63 YVILELWPEEIDSREGTLNEFEVENFVKALNSLKVKPDVVYIDAADVKEARFGEEIKAKL 122 Query: 114 KLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHL-- 171 +A K D + +SAASILAKV RD + L + + G GYP+ Sbjct: 123 DFEADIIAEHKADDKFVPVSAASILAKVARDRAIEKLKDQYGEIG----SGYPSDPRTRT 178 Query: 172 ---EKLAEHGA-TEHHRRSFGPVKRA 193 E +HG RR++ +K+ Sbjct: 179 FLEEYYRKHGEFPPIVRRTWKTLKKI 204 >UniRef50_UPI0001C31AB6 Ribonuclease H n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AB6 Length = 226 Score = 168 bits (427), Expect = 9e-41, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 94/187 (50%), Gaps = 7/187 (3%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-------IAGLNDSKKLSEKRRLALYEE 60 + VAG DE GRG L G +V AAV+ D R ++ LNDSK+ + +RR A+Y Sbjct: 30 GARFVAGADEAGRGCLAGPLVAAAVMFDYERITRSDLRALSALNDSKQQTAERREAIYPV 89 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 I A ++ ID + + A++ A+A + L DG R L Sbjct: 90 ILRVATRVAVISRCAPGIDRRGLHVTNLAALRDALARVACDGCICLSDGFRVADLGHDQR 149 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 AV+ GD+R I+AAS++AKVTRD M D++ P + FA H GY T H + G T Sbjct: 150 AVIGGDARSASIAAASVVAKVTRDRFMHRADVLHPGWEFASHVGYATPEHRAAIERLGIT 209 Query: 181 EHHRRSF 187 HR SF Sbjct: 210 PLHRLSF 216 >UniRef50_C1RMG0 Ribonuclease n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RMG0_9CELL Length = 279 Score = 165 bits (418), Expect = 9e-40, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 101/211 (47%), Gaps = 26/211 (12%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP--IAGLNDSKKLSEKRRLALYEEI 61 + + VAG+DEVGRG L G V V++D G+ DSK L+ R AL + Sbjct: 38 LLRTGLRYVAGMDEVGRGSLAGPVSVGVVVVDVGTRSAPRGVADSKLLTPAARAALLPSL 97 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHI---APEYVLIDGNR------- 111 ++ ++G A P EID+ I+ A LA RA+ + + V++DG+ Sbjct: 98 GRWGVARAVGHASPTEIDDRGIVAALRLAGTRALRSVLEVVEQVDAVVLDGSHDWLTPPE 157 Query: 112 -------------CPKLPMPAMAV-VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQY 157 P L +PA+ + VK D ++AAS+LAK RDA M P+Y Sbjct: 158 PDLFGTQSELFAPSPDLRVPAVHLRVKADRSCATVAAASVLAKCERDALMVQHAAAHPEY 217 Query: 158 GFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 + ++KGY + H+ L E G T HRRS+ Sbjct: 218 RWDENKGYASPEHVAALRELGPTPLHRRSWR 248 >UniRef50_A0ZZY2 Ribonuclease n=11 Tax=Bifidobacteriaceae RepID=A0ZZY2_BIFAA Length = 264 Score = 162 bits (411), Expect = 6e-39, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 103/220 (46%), Gaps = 43/220 (19%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVIL--------DPARPIAGLNDSKKLSEKRRLALYE 59 ++ G DEVGRG L G V+ A + P G+ DSK L+E RR A++E Sbjct: 45 GYDVIVGFDEVGRGSLAGPVMVGAAAIRTCDLSGPSPLAVPDGVADSKMLTEHRREAIFE 104 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN--------- 110 E+K SW++G A EID+ I +A +A RA L A + IDGN Sbjct: 105 ELKSWCASWAVGSASNTEIDDWGISYALGVAALRA---LSEAETRLGIDGNGLLDGRPVK 161 Query: 111 -------------------RCPKLPMPAM--AVVKGDSRVPEISAASILAKVTRDAEMAA 149 P +P+PA VKGD ++ A+++AKVTRD M Sbjct: 162 VGAILDGPNDYITKALNTFDAPDVPVPAEVSTKVKGDRYCATVATAAVIAKVTRDRLMVE 221 Query: 150 LDI--VFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 L + Y +A +KGY +A H + +AE G ++ HR S+ Sbjct: 222 LGAQPQYEPYEWAHNKGYGSAAHRDAIAEFGPSDLHRLSW 261 >UniRef50_Q5MCR3 Ribonuclease n=4 Tax=Leishmania RepID=Q5MCR3_LEIMA Length = 296 Score = 162 bits (411), Expect = 7e-39, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 110/268 (41%), Gaps = 77/268 (28%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPI--AGLNDSKKLSEKRRLALYEEI- 61 + P + V GVDE GRG + G V AA + + + DSKK+ E R E + Sbjct: 11 LRPSIRYVIGVDEAGRGCMAGPVGVAATLYRISATPVRYAVMDSKKMKESDRAETLEAMC 70 Query: 62 ----------------------------KEKALSWSLGRAEPHEIDELNILHATMLAM-- 91 ++ + + + I+E NIL+AT+ M Sbjct: 71 AELSDAGVEGFVGTTVRDGACCLVRYQRRKPLQAVAAALVDVSVINERNILNATLEGMSA 130 Query: 92 --------QRAVAGLH---IAPEYVLIDGNRCP--------------------------K 114 AV+GL +LIDGNR P Sbjct: 131 VCEAVVRSYNAVSGLGTLTPLTCAILIDGNRVPWTFLSGEERQRVCVQAVRKVEARKRIG 190 Query: 115 LPMPAM------AVVKGDSRVPEISAASILAKVTRDAE-MAALDIVFPQYGFAQHKGYPT 167 + PA+ VVKGD+ + I+AASI+AKV RDA ++ + FPQYGF HKGY T Sbjct: 191 VEYPALDGFSCTTVVKGDATLLSIAAASIVAKVARDAYAVSVMHPAFPQYGFDHHKGYCT 250 Query: 168 AFHLEKLAEHGATEHHRRSFGPVKRALG 195 A H +LA G + HR + PVK LG Sbjct: 251 AAHKAELARWGPSRFHRLDYAPVKGTLG 278 >UniRef50_Q1AW72 Ribonuclease n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW72_RUBXD Length = 204 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 92/179 (51%), Gaps = 3/179 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAGVDE GRG L G +V AAVILD + GL+DSK+L+ R L E+ A + S+ Sbjct: 27 VAGVDEAGRGALAGPLVAAAVILDGG-VVEGLDDSKRLARPARERLLPEVLGSAEALSVV 85 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 IDE + A ++RAV L L DGN +L + D R Sbjct: 86 VFPAWWIDEHGLGAANREVLRRAVGRLLPRAGCCLADGN--LRLGPRIDCLPGADGRSAA 143 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ++AAS++AKV RDA M+AL P YGF ++ GY T H LA G HR S+ V Sbjct: 144 VAAASVVAKVLRDAAMSALGAAHPGYGFERNCGYGTPEHRRALARLGPCRVHRLSYAGV 202 >UniRef50_B5Y8F7 Ribonuclease n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8F7_COPPD Length = 202 Score = 159 bits (403), Expect = 5e-38, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 102/187 (54%), Gaps = 5/187 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 V GVDEVGRG + G ++ AV + + DSK++S +R +++ I E + + +G Sbjct: 18 VVGVDEVGRGAVAGPLLVCAVRFHSSPEVK-WRDSKQMSPLQRKSVFANIVESSC-FGIG 75 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP-AMAVVKGDSRVP 130 A P +ID I A + A+A + + V+ DG R +P +VKGD +P Sbjct: 76 LAAPWDIDRFGISFCLKQAAEEALAEIPLDDAIVVFDGKRPLTTEVPDYQCMVKGDVLLP 135 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ++AAS++AKV RD M LD + P Y F+ HKGY T HLE + G T HRRSF + Sbjct: 136 SVAAASVVAKVIRDELMVCLDSLLPGYEFSAHKGYGTKTHLEAIRCFGITAQHRRSF--L 193 Query: 191 KRALGLA 197 +R L A Sbjct: 194 RRVLEQA 200 >UniRef50_C2BVF7 Ribonuclease n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BVF7_9ACTO Length = 235 Score = 158 bits (401), Expect = 8e-38, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 111/209 (53%), Gaps = 32/209 (15%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILD---------PARPIAGLNDSKKLSEKRRLALYEE 60 L+ G+DEVGRG L G V +LD P GLNDSK+L+ +RR+AL + Sbjct: 27 PLIGGMDEVGRGALAGPVCVGVAVLDQRSLDNPDFPQGFPVGLNDSKQLTARRRVALQDP 86 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGN------- 110 I+ +++G+A EIDEL I+ A LA RA+ L P+ +L+DGN Sbjct: 87 IQAWVRDFAIGQASNTEIDELGIMPALRLAGWRALNELDARGHLPQRLLLDGNFDYLASP 146 Query: 111 RCPKL-----------PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGF 159 R P L + +VKGD + I+AA++LAKV RDA M +L P YG+ Sbjct: 147 RQPDLFAEAGNLVSSPEVSVETLVKGDGKAAVIAAAAVLAKVYRDAFMRSLHD--PGYGW 204 Query: 160 AQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 A++ GY T H LAE GA+ HR+++ Sbjct: 205 ARNVGYGTPAHKAGLAELGASVWHRKTWK 233 >UniRef50_B5JFA5 Ribonuclease n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFA5_9BACT Length = 250 Score = 158 bits (401), Expect = 9e-38, Method: Composition-based stats. Identities = 73/220 (33%), Positives = 99/220 (45%), Gaps = 51/220 (23%) Query: 12 VAGVDEVGRGPLV------------GAVVTAAVILDPA---RPIAGLNDSKKLSEKRRLA 56 + G+DE GRG L G D R + +NDSK LS +R Sbjct: 20 LIGIDEAGRGALAGPVVAAAVAAKEG-------FYDSEWCKRNASSINDSKLLSLAQREE 72 Query: 57 LYEEIK----EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL-------HIAPE-- 103 LY +++ E + +G+ EI++LNIL AT AM+RAV + P+ Sbjct: 73 LYAKLRWLEREGRILIGVGKGSISEIEDLNILGATQAAMKRAVEEILEQGDISPHDPDPL 132 Query: 104 ----------------YVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEM 147 +L+DG L AVVKGDS+ I+ ASI+AKVTRD M Sbjct: 133 FDAALGGEPRETLSQWRLLVDGKPMKHLGFKHEAVVKGDSKSLCIAMASIIAKVTRDRIM 192 Query: 148 AALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ALD +P Y A KGY T H + ++G T+ HR F Sbjct: 193 MALDCEYPHYDLASSKGYATVLHRTAILDNGPTKIHRPLF 232 >UniRef50_Q6AEA6 Ribonuclease n=2 Tax=Actinobacteria (class) RepID=Q6AEA6_LEIXX Length = 226 Score = 156 bits (396), Expect = 3e-37, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 92/196 (46%), Gaps = 12/196 (6%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYEEI 61 + VDEVGRG L G V V++D A R GL DSK LSE R AL Sbjct: 14 LYRQGVTSIVAVDEVGRGALAGPVAVGMVVIDTAVKRIPLGLRDSKLLSEPAREALEPAC 73 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL-----HIAPEYVLIDGNR----- 111 + +L ++G A E+D I+ LA RA A L + +++DGN Sbjct: 74 RRWSLFHAVGLASADEVDRHGIMRCLGLAGARAFAVLEEQGAPVHDSALILDGNYDYLTL 133 Query: 112 CPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHL 171 P + VK D ++AAS++AKV RD M D P YG+A +KGY T H Sbjct: 134 ALTRPARVVTRVKADRDCASVAAASVIAKVHRDRLMIEHDADDPGYGWASNKGYSTPGHF 193 Query: 172 EKLAEHGATEHHRRSF 187 +AE G + HR ++ Sbjct: 194 AAIAELGPSAIHRLTW 209 >UniRef50_B8C6T8 Ribonuclease n=1 Tax=Thalassiosira pseudonana RepID=B8C6T8_THAPS Length = 341 Score = 156 bits (394), Expect = 5e-37, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 100/252 (39%), Gaps = 63/252 (25%) Query: 3 EFVYPHTQLVAGVDEVG-RGPLVGAVVTAAVIL--------------------------D 35 + Q V G D+ G G + G VV A+ L Sbjct: 88 DLHSRGYQFVIGSDDSGGAGCIAGPVVVASCCLLQPFSAVLPLDVSTKQSTAADKLLSQS 147 Query: 36 PARPIAGLNDSKKLSEKRRLALYEEIKEKA--LSWSLGRAEPHEIDELNILHATMLAMQR 93 +A +NDSK L+ ++R+ +Y I + S+ + P EID++N+ AT LA Sbjct: 148 EMEIMAIVNDSKTLTPQQRIDVYNVICAHPDVFAVSVAQRSPQEIDDINLTRATQLAFAE 207 Query: 94 AVA------GLHIAPEYVLIDGNRCPKL---------------------------PMPAM 120 ++ L Y ++DG PKL Sbjct: 208 SIESLVENYNLPFDKIYAIVDGKVSPKLYALQSSDTESSMQQQQSTQQSQQAAPKRFSVR 267 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG-A 179 GD+ V ++ +SI+A+V+RDA +A L +P YGF ++ GY + H+E + G Sbjct: 268 PYTNGDANVFTVALSSIVARVSRDAIIAELHDQYPSYGFDENLGYGSREHVEAVHRLGAL 327 Query: 180 TEHHRRSFGPVK 191 T HR SF VK Sbjct: 328 TGVHRLSFKQVK 339 >UniRef50_Q4JA60 Ribonuclease HII n=12 Tax=Sulfolobaceae RepID=RNH2_SULAC Length = 212 Score = 155 bits (393), Expect = 8e-37, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 91/203 (44%), Gaps = 24/203 (11%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLALYEEIKEKAL 66 ++ G+DE GRG L+G +V A V +D G+ DSKKL+ K+R L+ I E + Sbjct: 2 ILVGIDEAGRGSLIGPMVVAGVAIDSNFLKFLSEIGVKDSKKLTRKKREYLFGVILEYSY 61 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHI-APEYVLIDG--------NRCPKLPM 117 + SL +A P EID N+ T AM + + + + P V +D + Sbjct: 62 AISLVKAYPEEIDSENLNEITYRAMIQIIHSMSVYNPSIVTVDKVGNASAVEREIININS 121 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP----TAFHLEK 173 D + E+SAASI+AKV RD + L + +G GYP T ++ Sbjct: 122 SPRVENNADVKYVEVSAASIIAKVVRDNIINELKKTYGDFG----SGYPGDKKTVEWIKD 177 Query: 174 LAEHGAT---EHHRRSFGPVKRA 193 L T RRS+ ++ Sbjct: 178 LYSRQPTYALPIIRRSWKILQDI 200 >UniRef50_C8PNM3 Ribonuclease n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PNM3_9SPIO Length = 165 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 58/161 (36%), Positives = 74/161 (45%), Gaps = 16/161 (9%) Query: 47 KKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL-------- 98 KKLS KRR I E AL W + P ID++NIL AT+ AM+ A L Sbjct: 4 KKLSPKRRETARAAILEGALYWHIASMPPDLIDKINILQATLAAMKEAFDRLFARYRRDS 63 Query: 99 -HIAPEY-----VLIDGNRCPKL--PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAAL 150 + V++DGN+ P + A K D R P + AASILAK RD M Sbjct: 64 IGKTADIEKSLTVIVDGNQLPDIHGDFNLTAEPKADGRYPCVMAASILAKTERDRCMMEY 123 Query: 151 DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 +P Y + HKGY T H + +GA+ R SF K Sbjct: 124 HKQYPLYRYDLHKGYGTKLHRSLIEVYGASPIQRHSFTFKK 164 >UniRef50_A7I9P7 Ribonuclease HII n=4 Tax=Methanomicrobiales RepID=RNH2_METB6 Length = 213 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 90/207 (43%), Gaps = 27/207 (13%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAG--LNDSKKLSEKRRLALYEEIKEKALSW 68 ++ GVDE G+G ++G +V A V + I G L DSK+LS R L+ IK+K Sbjct: 1 MICGVDEAGKGSVLGPMVIAGVGVGSTEMIDGFGLRDSKQLSPSERERLFVLIKKK-CKV 59 Query: 69 SLGRAEPHEID--ELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL----------- 115 + EID + T +A AV +APE +D Sbjct: 60 ATVVISAAEIDAFRREMTLNTCVARAHAVVIAQLAPEIAYVDACDVNPFRYAETVRGYLS 119 Query: 116 -PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT-----AF 169 P ++ DS P +SAASI+AKVTRD E+A L + Q G GYP+ A+ Sbjct: 120 SPCEIVSEHHADSTYPVVSAASIVAKVTRDREIAKLAKKYGQIG----SGYPSDPETIAY 175 Query: 170 HLEKLAEHG-ATEHHRRSFGPVKRALG 195 + EH R+S+ V L Sbjct: 176 LNAYIDEHRIPPPIARKSWKTVSTLLA 202 >UniRef50_B6UB68 Ribonuclease n=1 Tax=Zea mays RepID=B6UB68_MAIZE Length = 284 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 28/216 (12%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVIL----DPARPIAGLNDSKKLSEKRRLALYEEIK- 62 + G+DE GRGP++G +V + + DSK L E++R L+E +K Sbjct: 11 KEPCLMGIDEAGRGPVLGPMVYGCMYCAYSYNNTLATLKFADSKTLKEEQREELFESLKV 70 Query: 63 EKALSWSLGRAEPHEID----------ELN-ILHATMLAMQRAVAGLHIAPEYVLIDGNR 111 ++ W + P +I LN I H + + + R V + + V +D Sbjct: 71 NSSIRWEVDVICPKDISAKMLKKKSKVNLNEISHNSAMGLVRKVLRMGVLLAEVYVDTVG 130 Query: 112 CPK----------LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQ 161 P+ + + + K DS P IS ASI+AKVTRD A + VF + + Sbjct: 131 DPEKYRTKLTEKFIGIKFVVAKKADSLYPVISGASIVAKVTRDR--ALRNWVFDETALSL 188 Query: 162 HKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLA 197 H + + + + +H FG K A+ + Sbjct: 189 HMRTRSGYLGDPDTKRWLEDHKHLVFGFFKDAVDVT 224 >UniRef50_A5ULV6 Ribonuclease HII n=3 Tax=Methanobacteriaceae RepID=RNH2_METS3 Length = 207 Score = 152 bits (385), Expect = 6e-36, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 27/205 (13%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIKEKALS 67 V G+DE GRG ++G +V A VI+ I G+ DSK+L+ RR L ++K+ Sbjct: 3 VLGIDEAGRGSVLGPLVIAGVIVPEKMDIVLERMGVKDSKRLTPNRRTILSRKLKKM-FE 61 Query: 68 WSLGRAEPHEIDE-----LNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP--------- 113 + L +ID +N+ + M++ ++ L+ PE ++D Sbjct: 62 YDLVVISAQDIDNMRADGINLNEIERIGMEKILSNLN--PEKAIVDAVDIKAERFQNKLA 119 Query: 114 -KLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP----TA 168 + +A K D E+SAASI+AK RDA +A ++ + + G GYP T Sbjct: 120 NDTGVNVVAEHKADDNYIEVSAASIIAKQERDAHIAEINKDYIKMG-GIGSGYPSDPITK 178 Query: 169 FHLEKLAEHGATEHHRRSFGPVKRA 193 L + R+S+ V++ Sbjct: 179 KFLTNFTYDEMPDFVRKSWATVEKM 203 >UniRef50_C5BWW5 Ribonuclease n=7 Tax=Actinomycetales RepID=C5BWW5_BEUC1 Length = 273 Score = 152 bits (384), Expect = 7e-36, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 97/202 (48%), Gaps = 24/202 (11%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 LVAG+DEVGRG L G V V++ PA R AGL DSK L+ R L ++ A + Sbjct: 34 LVAGMDEVGRGCLAGPVSVGVVVVGPATGRTPAGLRDSKLLTPAARERLVPPVRRWAFAS 93 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNR---CPKLP------ 116 ++ A EIDE+ I+ A LA RA+ L + P +++DG+ P P Sbjct: 94 AVAHASAAEIDEIGIIAALRLAGHRALGSLAADGVVPGALILDGSHDWLTPPQPDLFEAL 153 Query: 117 ----------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP 166 P VK D ++AAS+LAK RD M L P + +A +KGY Sbjct: 154 EPPVAPTAFVPPVRMRVKADLTCSVVAAASVLAKCERDGLMRVLHDDHPDFDWASNKGYA 213 Query: 167 TAFHLEKLAEHGATEHHRRSFG 188 HL L E G T HRRS+ Sbjct: 214 APEHLAALRELGPTVLHRRSWR 235 >UniRef50_Q468N6 Ribonuclease HII n=4 Tax=Methanosarcinaceae RepID=RNH2_METBF Length = 224 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 35/215 (16%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPAR----PIAGLNDSKKLSEKRRLALYEEIKEKAL 66 ++AG+DE G+GP++G + V ++ +R + G+ DSKKL+ K+R L +IK+ A Sbjct: 2 MIAGIDEAGKGPVIGPMCIGGVKIEESRAHILKVLGVADSKKLTPKKREQLAAQIKKHAD 61 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGL--HIAPEYVLIDG--------------- 109 + + P +IDEL + M + + + P+ + D Sbjct: 62 GFFVLEVSPSQIDELRKIMTMNEIMVVCFSKVLEQLKPDLLYADAADVNAERFATNIRKQ 121 Query: 110 ----NRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGY 165 N + +++ + D+ P +SAASI+AKV RD + L ++G GY Sbjct: 122 YSKTNPDHAKEIEIISMHQADATYPVVSAASIIAKVRRDELIEELKK---EWGLDFGSGY 178 Query: 166 PTAFHLEKLAEHG-------ATEHHRRSFGPVKRA 193 P+ ++ + E R+S+ V+ Sbjct: 179 PSDPKTKEFLLNWGKEHSGEFPEIVRQSWQTVENI 213 >UniRef50_UPI000038E392 ribonuclease HII n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E392 Length = 205 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 32/206 (15%) Query: 13 AGVDEVGRGPLVGAVVTAAVILD-PARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 G+DE GRGPL+G +V A + D + I G+ DSKKLS RR +L+ ++ ++ Sbjct: 4 CGIDEAGRGPLIGPMVMAILCGDRESLEIIGVADSKKLSPGRRESLFARLQSY--KYNFV 61 Query: 72 RAEPHEIDE------LNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPA------ 119 P EID LN+L T +A A V +D +L + + Sbjct: 62 IISPSEIDRYVEHQKLNVLEETY---ASKLASWAPASSTVYVDSFDVNELRLQSLLMENT 118 Query: 120 ----MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKL- 174 + K D P +SAASI+AKV RD E+ L + +G GYP+ Sbjct: 119 KRQIVCRHKADEIYPCVSAASIIAKVIRDREIDKLHKDYGDFG----SGYPSDPRTINFV 174 Query: 175 ---AEHGAT--EHHRRSFGPVKRALG 195 ++G R + K L Sbjct: 175 KNALKNGINIDSIVRHQWKTYKSMLN 200 >UniRef50_A2DUE3 Ribonuclease n=1 Tax=Trichomonas vaginalis RepID=A2DUE3_TRIVA Length = 269 Score = 149 bits (376), Expect = 7e-35, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 35/218 (16%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA-GLNDSKKLSEKRRLALYEEIKEKA 65 +L G+DE GRGP +G +V + I ++DSKKL+ ++R +++EIK+ Sbjct: 16 KGIELEMGIDEAGRGPALGPMVYSGAIAPNKYEWPKDVDDSKKLTAEQREEIFDEIKKLP 75 Query: 66 LSWSLGRAEPHEI--------------DELNILHATMLAMQRAVAGLHIAPEYVLIDG-- 109 + +++ EI + ++ A L GL+I YV G Sbjct: 76 VGFAVRVISAEEISAKQTALVNPPISLNTVSHHAARDLVQAFLDKGLNIKALYVDTVGIA 135 Query: 110 --------NRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGF-- 159 ++ P + + A K D+ + AASI AKVTRD +A P Sbjct: 136 ESYQDWLQDKFPNIKVTVRA--KADATYKVVGAASICAKVTRDRLLADFKFEEPGLEISH 193 Query: 160 AQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVK 191 GYP+ E G R + P+K Sbjct: 194 DWGSGYPSDPKTSNWLETNFDPVFGYPSVARFDWKPIK 231 >UniRef50_B1L3S7 Ribonuclease n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3S7_KORCO Length = 217 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 90/209 (43%), Gaps = 32/209 (15%) Query: 13 AGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 G+DE GRGP++G +V AAVIL G+ DSK LS +RR L+ I E A S+ Sbjct: 1 MGIDEAGRGPVIGPMVVAAVILKRREAKRLKEMGVTDSKLLSAERREELFPMIIESAESY 60 Query: 69 SLGRAEPHEIDE------LNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL------- 115 + EP IDE LN+L A M + L A V C K Sbjct: 61 LIKVIEPKRIDEAVSKNMLNLLEA--EVMSELIRELRPARVIVDSPMRNCRKFSDVLREF 118 Query: 116 ----PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP----T 167 + +A K DS+ ++++ASI+AKV RD + L + G GYP T Sbjct: 119 LGDSSVKIIAENKADSKYIQVASASIIAKVERDRRIRELSEL---TGVEIGSGYPGDPKT 175 Query: 168 AFHLEKLAE--HGATEHHRRSFGPVKRAL 194 + + + + R + + R L Sbjct: 176 REAIRMILKGAEFPRDQVRWKWATINRLL 204 >UniRef50_A8MAH5 Ribonuclease HII n=2 Tax=Thermoproteaceae RepID=RNH2_CALMQ Length = 209 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 22/203 (10%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAV-ILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 L AG+DE GRGP++G +V A V + G+ DSK+L+ R LY+ I KA Sbjct: 5 NSLEAGIDEAGRGPVIGPMVIAIVGWSNSEAEGIGVKDSKQLTPSGRSRLYKLIVSKAPC 64 Query: 68 WSLGRAEPHEID------ELNILHATMLA-MQRAVAGL-HIAPEYVLIDGNRCPKL---- 115 EP EID LN L A ++ + +A +G+ + + + +R Sbjct: 65 VRHVIVEPSEIDYYVNRGLLNELEAIKMSELIKACSGVTRVYVDSPDPNPSRFRGFINVK 124 Query: 116 PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLA 175 + + + D +P +SAASI+AKV RD ++ L + +G GYP+ Sbjct: 125 DVELIVLNHADESIPLVSAASIVAKVIRDTIISRLKETYGDFG----SGYPSDPRTISAL 180 Query: 176 EHGA-----TEHHRRSFGPVKRA 193 RRS+ +KR Sbjct: 181 RRWINNGTLPPIVRRSWRTIKRM 203 >UniRef50_A1RYM0 Ribonuclease HII n=1 Tax=Thermofilum pendens Hrk 5 RepID=RNH2_THEPD Length = 213 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 90/212 (42%), Gaps = 35/212 (16%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIKEKALS 67 VAG+DE GRGP++G +V A V+ + G+ DSK LS +RRL L I S Sbjct: 4 VAGIDEAGRGPMLGPMVVAIVVCPEEKVPLLRNMGVRDSKALSPRRRLLLSRAIPSVGCS 63 Query: 68 WSLGRAEPHEID---------ELNILHATMLAMQRAVAGLHIAPEYVLIDG-NRCP-KLP 116 + EP EID LN L A + A E V +D + P + Sbjct: 64 VKVRVVEPQEIDCAVRGECYENLNHLEAAVFAQLINEVLSEGELEVVYMDSPDPVPSRFE 123 Query: 117 MPAMAVVKG----------DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP 166 A++KG D + + AASI+AK TRD + AL + +G GYP Sbjct: 124 ERVRALLKGQVRIVAENGADEKYTIVGAASIVAKETRDEIINALKKTYGDFG----SGYP 179 Query: 167 TAFHL-----EKLAEHG-ATEHHRRSFGPVKR 192 + E + +HG R+ + KR Sbjct: 180 SDPRTLRFAEEWVRKHGEPPPIARKEWATWKR 211 >UniRef50_A2BL34 Ribonuclease HII n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=RNH2_HYPBU Length = 240 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 27/211 (12%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLALYEEI 61 + G+DE GRGP++G +V V + G+ DSK+L+ R LY EI Sbjct: 3 RRRCRYAIGIDEAGRGPVIGPMVVVGVAVCSNDIDKLVALGVRDSKQLTPVVRAKLYGEI 62 Query: 62 KEKALSWSLGRAEPHEIDELNILH---ATMLAMQRAVAGLHIAPEYVLIDGNRCPK---- 114 AL + + P +D +N+ T + +AG+H +PE V +D P+ Sbjct: 63 LRVALHSVIVKLPPALLDAVNLNQLEVETFEYIASRIAGVHDSPEAVYVDAVGSPEKLAA 122 Query: 115 -----LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT-- 167 L + +A D P +SAASI+AKV RDAE+ L ++ G GYPT Sbjct: 123 RLSGRLGVRVIAEPGADKTYPIVSAASIVAKVVRDAEIRMLRRLYGVRG----SGYPTDP 178 Query: 168 ---AFHLEKLAEHGATE--HHRRSFGPVKRA 193 A+ E+ + A RR++ +KR Sbjct: 179 ETIAWLAEEYRRNPANPPWFVRRTWSTLKRI 209 >UniRef50_A4WHQ7 Ribonuclease HII n=4 Tax=Pyrobaculum RepID=RNH2_PYRAR Length = 198 Score = 145 bits (368), Expect = 6e-34, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 91/195 (46%), Gaps = 22/195 (11%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILD-PARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 V G+DE GRGP+VG +V A V+ D A G+ DSK LS + R LY +I E A+ + Sbjct: 5 VGGIDEAGRGPVVGPLVLAIVVGDSEALSKIGVRDSKSLSPRAREVLYGKILEMAVCVNY 64 Query: 71 GRAEPHEID---ELNILHATMLAMQRAVAGLHIAP-EYVLID---------GNRCPKLPM 117 EP+EID +L+A L M+ A + + P + +D G+ L Sbjct: 65 AVVEPYEIDLHVSRGMLNA--LEMKYAAKLMELCPADLYYVDSPDVKAARFGDGLSFLTG 122 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 + + VP+++AASI+AKV RD + L +G GYP+ + Sbjct: 123 RRVVSLHKGEAVPQVAAASIVAKVVRDRLVEMLRKEVGDFG----SGYPSDRKTREWLRG 178 Query: 178 GATEH--HRRSFGPV 190 G H R S+ V Sbjct: 179 GRIPHECVRWSWETV 193 >UniRef50_UPI00006CE52A ribonuclease HII family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CE52A Length = 284 Score = 145 bits (366), Expect = 9e-34, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 91/238 (38%), Gaps = 50/238 (21%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLAL 57 E + V G+DE GRGP++G +V + P + G NDSK+L+E++R L Sbjct: 4 FENKKKNLDWVMGIDEAGRGPVLGPMVYGCCVWPIQYEPELKLEGFNDSKQLTEQKRDQL 63 Query: 58 Y---EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQR-AVAGLHIAPEYVLIDGNRCP 113 Y EE+K L + + L MLA R ++ L Y LID Sbjct: 64 YARMEELKNDKLYFEVRILSAE------FLSNRMLAKNRDSLNELSFNAAYSLIDSVMSQ 117 Query: 114 KLPMPAMAV-----------------------------VKGDSRVPEISAASILAKVTRD 144 + + + K D++ P + AASI AKVTRD Sbjct: 118 GFNVTQVFLDTVGKEETYQAKLYQDYKYTYPQLKFTVSSKADAKFPVVGAASICAKVTRD 177 Query: 145 AEMAALDIVFP-QYGFAQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 ++ D+ P A GYP+ + +K + G + R S+ V Sbjct: 178 LQITNNDMREPLDLSKATGSGYPSDPNTKKWLQEVFDPVFGFPSNVRYSWSTVDNIFN 235 >UniRef50_UPI00019264AB PREDICTED: similar to ribonuclease H2, large subunit n=3 Tax=Eumetazoa RepID=UPI00019264AB Length = 339 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 83/219 (37%), Gaps = 36/219 (16%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 G+DE GRGP++G +V + G DSK L+E++R L I+ Sbjct: 28 PCCLGIDEAGRGPVLGPMVYSVCYCPISMIKKLSDLGFADSKTLTEEKRDNLLSVIENNC 87 Query: 66 --LSWSLGRAEPHEI------------DELNILHATMLAMQRAVAGLHIAPEYVLIDGNR 111 + W++ P EI +E++ A L + AG +I YV G+ Sbjct: 88 DFIGWAIKIISPTEISNEMLRRYKVTLNEISHGAAIELTRKTINAGANITEMYVDTVGDA 147 Query: 112 CPKLP--------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGF--AQ 161 + K D+ P +SAASI AKV RD + FP+ Sbjct: 148 SKYQNKLSEVFDGVSVKVTPKADALFPIVSAASICAKVARDRCIQ--GWQFPEGDIKEDY 205 Query: 162 HKGYP----TAFHLEKLAE--HGATEHHRRSFGPVKRAL 194 GYP T L+ + + G + R S+ L Sbjct: 206 GSGYPADPKTKQWLKDVVDPVFGFPQFVRFSWSTCVNIL 244 >UniRef50_UPI0001C41F2F ribonuclease HII RnhB n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41F2F Length = 219 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 31/208 (14%) Query: 14 GVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIKEKALSWS 69 G+DE GRGP++G +V A +++ + G+ DSK+++ KRR LY ++ + Sbjct: 5 GLDEAGRGPVLGPMVVAGIVIPEKKEKIIERMGVKDSKRITPKRRAVLYRKLTRM-FDYE 63 Query: 70 LGRAEPHEIDEL-----NILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM------- 117 +ID L N+ LAM R +A L + ++ID + + Sbjct: 64 TVEISAKDIDLLRAKGVNLNQIEKLAMMRIIAKLK--ADTIIIDSLDIKEGRLEEEMQNF 121 Query: 118 -----PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQ---HKGYP--- 166 +A K D + + AASI+AK RD + ++ + + + GYP Sbjct: 122 VGEGSKVIAEHKADDKYIVVGAASIIAKTKRDEIINQINKEYIRSTGNKDGIGSGYPSDP 181 Query: 167 -TAFHLEKLAEHGATEHHRRSFGPVKRA 193 T L+ + RRS+G V+R Sbjct: 182 KTKNFLKNYKYDEMPDFVRRSWGTVQRI 209 >UniRef50_A0RV25 Ribonuclease HII n=2 Tax=Thaumarchaeota RepID=RNH2_CENSY Length = 205 Score = 142 bits (360), Expect = 5e-33, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 86/205 (41%), Gaps = 31/205 (15%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPAR----PIAGLNDSKKLSEKRRLALYEEIKEKAL 66 LV GVDE GRG LVG +V A V + R G+ DSKKL+ K R +LY EI A Sbjct: 2 LVCGVDEAGRGSLVGPLVIAGVAIKRNRMRELKSMGVRDSKKLTRKARESLYPEIVNMAD 61 Query: 67 SWSLGRAEPHEIDE------LNILHATMLAMQRAVAGLHIAPEYVL-ID------GNRCP 113 S+ + R P +D LN L A M R + L YV D G R Sbjct: 62 SYHISRVPPGVVDRSVGRHMLNDLEARY--MARVITRLGHGTTYVDSCDVNPRRFGGRVS 119 Query: 114 KLPMP-AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLE 172 ++ + + D R +SAASILAKV RD + L GYP+ Sbjct: 120 EMSGRTVRSYHRADDRFVIVSAASILAKVARDRSIERLRKSH-----DVGSGYPSDRRTV 174 Query: 173 KLAE-----HG-ATEHHRRSFGPVK 191 +G RRS+ P + Sbjct: 175 GFVRGYYNKNGAMPPFVRRSWRPAR 199 >UniRef50_Q9SEZ6 Ribonuclease H2 subunit A n=9 Tax=Embryophyta RepID=RNH2A_ARATH Length = 296 Score = 142 bits (360), Expect = 5e-33, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 39/221 (17%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLALYEEI 61 + + G+DE GRGP++G +V + + + DSK L E++R LYE + Sbjct: 10 WASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEEKREELYESL 69 Query: 62 K-EKALSWSLGRAEPHEID---------ELN-ILHATMLAMQRAVAGLHIAPEYVLIDGN 110 K +K+L W++ +P E+ LN I H + + + + V + + +D Sbjct: 70 KLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVLLTEAYLDTV 129 Query: 111 RCPK-------LPMPAMAVV---KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA 160 P P++ V K DS P +S ASI+AKVTRD + + + G Sbjct: 130 GDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEW--LVEETGED 187 Query: 161 QH----KGYP----TAFHLEKLAEH---GATEHHRRSFGPV 190 + GYP T L +H G R S+G Sbjct: 188 INRNFGSGYPGDPETKAWL-VQHKHSVFGFPSLVRFSWGTC 227 >UniRef50_B7GN37 Ribonuclease n=5 Tax=Bifidobacterium longum RepID=B7GN37_BIFLI Length = 279 Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 106/265 (40%), Gaps = 81/265 (30%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGA-VVTAAVILDPARPI------------------AGLN 44 L+ G DEVGRG L G +V A I G+ Sbjct: 12 LAAQGYDLITGFDEVGRGALAGPVMVGCAAIWARDLEPLDGDDAVELSGRTYLGVPDGVA 71 Query: 45 DSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNI--------------------- 83 DSK L+E RR A+++E+++ ++++G+A EIDE I Sbjct: 72 DSKMLTEHRREAIFDELRDWCAAYAVGQASNTEIDEWGITYALGVAALRALSQVERELGL 131 Query: 84 -----LHATMLAMQRA----------------------------VAGLHIAP-EYV--LI 107 L A +M+ A VAG+ P +Y+ + Sbjct: 132 RLGGRLAARKASMESAGEIVEGHPGDSVGESIGNCRESVRALPKVAGILDGPSDYITKAL 191 Query: 108 DGNRCPKLPMPA--MAVVKGDSRVPEISAASILAKVTRDAEMAALDI---VFPQYGFAQH 162 + P +P+PA VKGD ++ A+++AKVTRD M L + Y +A + Sbjct: 192 NTFDAPDVPIPADITTKVKGDQHCATVATAAVIAKVTRDRLMVDLAQSNPCYAAYEWAHN 251 Query: 163 KGYPTAFHLEKLAEHGATEHHRRSF 187 KGY +A H +AEHG T HR S+ Sbjct: 252 KGYGSAAHRTAIAEHGPTPLHRVSW 276 >UniRef50_D2RFM0 Ribonuclease HII n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RFM0_ARCPR Length = 211 Score = 142 bits (358), Expect = 8e-33, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 23/198 (11%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPAR----PIAGLNDSKKLSEKRRLALYEEIKEKAL 66 ++AG+DE G+GP++G +V V+ D G+ DSKKL ++R LY IK Sbjct: 1 MIAGIDEAGKGPVIGPLVICGVLCDEETVEYLKSVGVKDSKKLDRRKREELYNIIKSL-C 59 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGL--HIAPEYVLIDGNRC----------PK 114 + + +++ L + ++RA + + P+ V ID + Sbjct: 60 KVKVLKISVEDLNRLMEYMSINEILKRAYVEIIRSLMPKVVYIDCPDINVERFKHEIEER 119 Query: 115 LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKL 174 + A K D P +S ASI+AKV RD E+ L ++ +G GYP+ + Sbjct: 120 TGVEVFASHKADEIYPIVSIASIVAKVERDFEIDKLKKIYGDFG----SGYPSDLRTIEF 175 Query: 175 AEHGATEHHRRSFGPVKR 192 EH +SF P+ R Sbjct: 176 LRSYLREH--KSFPPIVR 191 >UniRef50_B6ACV8 Ribonuclease n=1 Tax=Cryptosporidium muris RN66 RepID=B6ACV8_9CRYT Length = 286 Score = 141 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 44/233 (18%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEE 60 ++ ++ G+DE GRGP++G +V A + ++DSKKL+E R + ++ Sbjct: 14 LFNKRPVILGIDEAGRGPVLGPMVFACFYYPTENEKLLKLMNIDDSKKLTENSREKINKD 73 Query: 61 IK--EKALSWSLGRAEPHEID---------ELN-ILHATMLAMQRAVAGLHIAPEYVLID 108 I+ + W + P + LN I H + + ++V + ++ ID Sbjct: 74 IRNNKNQFGWGIYILLPQYLSCQMLKKQKYNLNEISHTAAINLIKSVLQHGVNVTHIYID 133 Query: 109 GNRCP-------KLPMPAMAVV---KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYG 158 P KL P++ + K DS P +S ASILAKV RD ++ FP + Sbjct: 134 TVGPPESYKKKLKLLFPSINITVTPKADSLYPCVSGASILAKVERDHFLSNW-WSFPGHD 192 Query: 159 -----------FAQHKGYP----TAFHLEKL--AEHGATEHHRRSFGPVKRAL 194 + Q GYP T L+++ G R S+ + + Sbjct: 193 RYDHNGNNLSIYEQGSGYPGDPKTKQFLKQIFHKVFGFPNIVRFSWSTADQII 245 >UniRef50_C4VBD8 Ribonuclease n=1 Tax=Nosema ceranae BRL01 RepID=C4VBD8_NOSCE Length = 235 Score = 140 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 28/209 (13%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 +++ GVDE GRGP++G +V ++ + L DSK L+EK R ++ +K+ + Sbjct: 15 DKRVIVGVDEAGRGPVIGYMVYCVMVFEVDNVPKNLKDSKMLTEKMRNDIFVTLKDYNYA 74 Query: 68 WSL---GRAEPHEIDELN---ILHATMLAMQRAVAGLHIAPEYVLIDG-------NRCPK 114 ++ + +N I T+L + + V + E + ID + Sbjct: 75 YTALHPSYITTKMLSNVNLNDISWNTVLNLLKLVCNAYTNIEGIFIDAIGTCDKLKEFLE 134 Query: 115 LPMPAMAVV--KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP----TA 168 L + V K DS+ P +S ASI+AKVTRD ++ +I F GYP T Sbjct: 135 LNIKHKCTVESKADSKYPVVSGASIVAKVTRDDLLSKFNISF-------GSGYPSDPVTK 187 Query: 169 FHLEKLAEH--GATEHHRRSFGPVKRALG 195 L K + G + R ++ K LG Sbjct: 188 KWLTKEVNYIFGWGKSVRYTWNTAKNILG 216 >UniRef50_A0B796 Ribonuclease HII n=1 Tax=Methanosaeta thermophila PT RepID=RNH2_METTP Length = 211 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 27/206 (13%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLALYEEIKEKAL 66 L+ GVDE G+GP++G++ A V+ G+ DSK LS RR ++ +I A Sbjct: 3 LILGVDEAGKGPVIGSMFVAGVVFSEEDIFDLAACGVKDSKLLSPTRRESMERKILSIAR 62 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGL--HIAPEYVLIDG------------NRC 112 + +ID+L ++ + M RA + + + + ++D Sbjct: 63 ESFVLEVTAQQIDDLRMVMSMNEIMVRAHSRVVSRLQADRAILDAADVNAERFAQRVREV 122 Query: 113 PKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT----- 167 P+ +A D + ++AASI+AKV RD + L+ G GYP+ Sbjct: 123 SGKPIDILAEHNADRKHIVVAAASIIAKVARDRSIRDLEAA---LGRPLGSGYPSDPATV 179 Query: 168 AFHLEKLAEHGATE-HHRRSFGPVKR 192 F E + E+G R+S+ +R Sbjct: 180 RFLKEWIEENGDLPSFVRKSWSTAQR 205 >UniRef50_O75792 Ribonuclease H2 subunit A n=20 Tax=Chordata RepID=RNH2A_HUMAN Length = 299 Score = 139 bits (352), Expect = 4e-32, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 79/221 (35%), Gaps = 33/221 (14%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIK 62 V GVDE GRGP++G +V A + DSK L E R L+ +++ Sbjct: 25 RKEPCVLGVDEAGRGPVLGPMVYAICYCPLPRLADLEALKVADSKTLLESERERLFAKME 84 Query: 63 E-KALSWSLGRAEPHEID---------ELN-ILHATMLAMQRAVAGLHIAPEYVLIDGNR 111 + + W+L P+ I LN + H T + + + V +D Sbjct: 85 DTDFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTATGLIQYALDQGVNVTQVFVDTVG 144 Query: 112 CPKL-------PMPAMAVV---KGDSRVPEISAASILAKVTRDAEMAALD--IVFPQYGF 159 P+ P + V K D+ P +SAASI AKV RD + Sbjct: 145 MPETYQARLQQSFPGIEVTVKAKADALYPVVSAASICAKVARDQAVKKWQFVEKLQDLDT 204 Query: 160 AQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRAL 194 GYP + + G + R S+ + L Sbjct: 205 DYGSGYPNDPKTKAWLKEHVEPVFGFPQFVRFSWRTAQTIL 245 >UniRef50_Q0W5R8 Ribonuclease HII n=2 Tax=Euryarchaeota RepID=RNH2_UNCMA Length = 224 Score = 139 bits (352), Expect = 4e-32, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 29/208 (13%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIK 62 T + G+DE GRGP++G +V +I++ PA GL DSKKLS K+R +K Sbjct: 4 KRTSTIMGIDEAGRGPVIGPLVVCGIIVEEKDLPAIEAMGLKDSKKLSAKKREEFAAALK 63 Query: 63 EKALSWSLGRAEPHEID-------ELNILHATMLA--------MQRAVAGLHIAPEYVLI 107 K + L P EID LN L A + + E I Sbjct: 64 NK-YKYELSVLPPQEIDARFESEDNLNRLEVNCFAGLIRSAKPTIAYLDACDVNAERFGI 122 Query: 108 DGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT 167 + +C + ++ + DS+ P +SAASI+AKV RD+ + + G GYP Sbjct: 123 NIKKCLDFELEIVSAHEADSKYPIVSAASIIAKVHRDSLIREISEKM---GEDVGSGYPA 179 Query: 168 AFHLEKLAEHGATEHH------RRSFGP 189 ++ +H R+S+ Sbjct: 180 DPVTISFLKNYYMKHKCLPDCARKSWKT 207 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C5D8U9 Ribonuclease HII n=118 Tax=Bacteria RepID=RNH2_G... 269 4e-71 UniRef50_Q6MDG7 Ribonuclease HII n=11 Tax=Chlamydiales RepID=RNH... 267 2e-70 UniRef50_C8W5A6 Ribonuclease n=3 Tax=Bacteria RepID=C8W5A6_DESAS 266 3e-70 UniRef50_D1R4X2 Ribonuclease n=1 Tax=Parachlamydia acanthamoebae... 264 1e-69 UniRef50_B1GZ18 Ribonuclease HII n=11 Tax=Bacteria RepID=RNH2_UNCTG 264 1e-69 UniRef50_A7H722 Ribonuclease HII n=9 Tax=Bacteria RepID=RNH2_ANADF 263 3e-69 UniRef50_A1TN83 Ribonuclease HII n=11 Tax=Proteobacteria RepID=R... 261 7e-69 UniRef50_B0K1U0 Ribonuclease n=12 Tax=Bacteria RepID=B0K1U0_THEPX 260 2e-68 UniRef50_B5EBC6 Ribonuclease HII n=5 Tax=Deltaproteobacteria Rep... 260 2e-68 UniRef50_UPI00017443D3 Ribonuclease H n=1 Tax=Verrucomicrobium s... 260 3e-68 UniRef50_A3DDG7 Ribonuclease HII n=6 Tax=Bacteria RepID=RNH2_CLOTH 259 4e-68 UniRef50_Q5WFP1 Ribonuclease HII n=2 Tax=Bacillaceae RepID=RNH2_... 258 1e-67 UniRef50_A9KLL7 Ribonuclease HII n=39 Tax=Bacteria RepID=RNH2_CLOPH 257 1e-67 UniRef50_B2T5I0 Ribonuclease HII n=16 Tax=Proteobacteria RepID=R... 257 1e-67 UniRef50_B1YS60 Ribonuclease HII n=13 Tax=cellular organisms Rep... 257 2e-67 UniRef50_Q18BC9 Ribonuclease HII n=15 Tax=Bacteria RepID=RNH2_CLOD6 257 2e-67 UniRef50_A8FY28 Ribonuclease HII n=14 Tax=Bacteria RepID=RNH2_SHESH 256 2e-67 UniRef50_C2ESF1 Ribonuclease n=5 Tax=Lactobacillaceae RepID=C2ES... 256 3e-67 UniRef50_A3NAT3 Ribonuclease HII n=37 Tax=Bacteria RepID=RNH2_BURP6 256 4e-67 UniRef50_Q03Y48 Ribonuclease HII n=10 Tax=Lactobacillales RepID=... 255 5e-67 UniRef50_C5NXH7 Ribonuclease n=1 Tax=Gemella haemolysans ATCC 10... 255 8e-67 UniRef50_Q043R9 Ribonuclease HII n=22 Tax=Firmicutes RepID=RNH2_... 255 9e-67 UniRef50_B5W7X5 Ribonuclease n=2 Tax=Arthrospira RepID=B5W7X5_SPIMA 252 5e-66 UniRef50_D2MIZ6 Ribonuclease HII n=1 Tax=Candidatus Poribacteria... 251 1e-65 UniRef50_C0GHM4 Ribonuclease n=1 Tax=Dethiobacter alkaliphilus A... 250 2e-65 UniRef50_A6NUN5 Ribonuclease n=1 Tax=Bacteroides capillosus ATCC... 250 2e-65 UniRef50_C0EQ70 Ribonuclease n=2 Tax=Neisseria flavescens RepID=... 249 4e-65 UniRef50_B0SZF7 Ribonuclease HII n=6 Tax=Caulobacteraceae RepID=... 249 5e-65 UniRef50_C4Z936 Ribonuclease n=4 Tax=Clostridiales RepID=C4Z936_... 248 5e-65 UniRef50_A0NVD9 Ribonuclease n=2 Tax=Rhodobacteraceae RepID=A0NV... 248 6e-65 UniRef50_Q1GD84 Ribonuclease HII n=22 Tax=Alphaproteobacteria Re... 248 6e-65 UniRef50_D1C7S7 Ribonuclease n=1 Tax=Sphaerobacter thermophilus ... 248 8e-65 UniRef50_Q0AWX1 Ribonuclease HII n=1 Tax=Syntrophomonas wolfei s... 248 9e-65 UniRef50_Q2B7D6 Ribonuclease n=1 Tax=Bacillus sp. NRRL B-14911 R... 247 2e-64 UniRef50_Q1JGT2 Ribonuclease HII n=78 Tax=Firmicutes RepID=RNH2_... 246 4e-64 UniRef50_B9XLY3 Ribonuclease n=1 Tax=bacterium Ellin514 RepID=B9... 246 4e-64 UniRef50_B9M597 Ribonuclease HII n=3 Tax=Deltaproteobacteria Rep... 245 6e-64 UniRef50_A8SF05 Ribonuclease n=1 Tax=Faecalibacterium prausnitzi... 244 1e-63 UniRef50_C6QIW2 Ribonuclease n=1 Tax=Hyphomicrobium denitrifican... 244 1e-63 UniRef50_A5FIL7 Ribonuclease HII n=4 Tax=Flavobacteriales RepID=... 243 2e-63 UniRef50_Q3AC76 Ribonuclease HII n=1 Tax=Carboxydothermus hydrog... 243 3e-63 UniRef50_A5UX01 Ribonuclease HII n=8 Tax=Chloroflexi RepID=RNH2_... 243 4e-63 UniRef50_A7HQZ3 Ribonuclease HII n=43 Tax=Bacteria RepID=RNH2_PARL1 242 5e-63 UniRef50_Q2JW45 Ribonuclease HII n=5 Tax=Cyanobacteria RepID=RNH... 241 7e-63 UniRef50_Q024M2 Ribonuclease HII n=1 Tax=Candidatus Solibacter u... 241 8e-63 UniRef50_B8FRK8 Ribonuclease HII n=5 Tax=Bacteria RepID=RNH2_DESHD 241 1e-62 UniRef50_Q49X31 Ribonuclease HII n=55 Tax=Staphylococcus RepID=R... 241 1e-62 UniRef50_A5D1I3 Ribonuclease HII n=4 Tax=Bacteria RepID=RNH2_PELTS 241 1e-62 UniRef50_Q73G60 Ribonuclease HII n=9 Tax=Rickettsiales RepID=RNH... 241 1e-62 UniRef50_D0NJ61 Ribonuclease n=1 Tax=Phytophthora infestans T30-... 240 2e-62 UniRef50_B9EBC6 Ribonuclease HII n=3 Tax=Staphylococcaceae RepID... 240 3e-62 UniRef50_C8WWC4 Ribonuclease n=2 Tax=Alicyclobacillus acidocalda... 240 3e-62 UniRef50_Q5NNT2 Ribonuclease HII n=5 Tax=Alphaproteobacteria Rep... 239 4e-62 UniRef50_B9DPH3 Ribonuclease HII n=1 Tax=Staphylococcus carnosus... 238 9e-62 UniRef50_A8VRY1 Ribonuclease n=1 Tax=Bacillus selenitireducens M... 238 1e-61 UniRef50_Q2P4B9 Ribonuclease HII n=19 Tax=cellular organisms Rep... 237 2e-61 UniRef50_B8CW25 Ribonuclease n=1 Tax=Halothermothrix orenii H 16... 237 2e-61 UniRef50_B1VG82 Ribonuclease n=1 Tax=Corynebacterium urealyticum... 237 2e-61 UniRef50_Q0AEI5 Ribonuclease HII n=2 Tax=Nitrosomonas RepID=RNH2... 237 2e-61 UniRef50_C4XFT1 Ribonuclease n=1 Tax=Mycoplasma fermentans PG18 ... 236 3e-61 UniRef50_Q3A2F0 Ribonuclease HII n=3 Tax=Deltaproteobacteria Rep... 236 3e-61 UniRef50_B2KC56 Ribonuclease n=1 Tax=Elusimicrobium minutum Pei1... 236 5e-61 UniRef50_A6GPG3 Ribonuclease n=1 Tax=Limnobacter sp. MED105 RepI... 235 5e-61 UniRef50_Q3Z8D7 Ribonuclease HII n=2 Tax=Dehalococcoides RepID=R... 235 6e-61 UniRef50_B5YFD2 Ribonuclease n=2 Tax=Dictyoglomus RepID=B5YFD2_D... 235 8e-61 UniRef50_D1Q046 Ribonuclease n=2 Tax=Prevotella RepID=D1Q046_9BACT 235 8e-61 UniRef50_A4J661 Ribonuclease HII n=2 Tax=Clostridia RepID=RNH2_D... 235 1e-60 UniRef50_A0LV66 Ribonuclease HII n=41 Tax=Actinomycetales RepID=... 234 2e-60 UniRef50_C0QW88 Ribonuclease n=1 Tax=Brachyspira hyodysenteriae ... 234 2e-60 UniRef50_Q3B6X8 Ribonuclease HII n=5 Tax=Chlorobiaceae RepID=RNH... 234 2e-60 UniRef50_A5IIL8 Ribonuclease HII n=7 Tax=Thermotogaceae RepID=RN... 234 2e-60 UniRef50_B0N757 Ribonuclease n=4 Tax=Bacteria RepID=B0N757_9FIRM 233 2e-60 UniRef50_Q4FPF7 Ribonuclease HII n=3 Tax=Bacteria RepID=RNH2_PELUB 233 3e-60 UniRef50_C7NAV4 Ribonuclease n=5 Tax=Fusobacteriaceae RepID=C7NA... 232 6e-60 UniRef50_Q3AP34 Ribonuclease HII n=7 Tax=Chlorobiaceae RepID=RNH... 232 6e-60 UniRef50_C6PQZ2 Ribonuclease n=1 Tax=Clostridium carboxidivorans... 231 1e-59 UniRef50_Q2S009 Ribonuclease HII n=1 Tax=Salinibacter ruber DSM ... 231 1e-59 UniRef50_Q31PW0 Ribonuclease HII n=2 Tax=Synechococcus elongatus... 230 2e-59 UniRef50_C9KJR4 Ribonuclease n=1 Tax=Mitsuokella multacida DSM 2... 230 2e-59 UniRef50_Q1MRU8 Ribonuclease HII n=2 Tax=Desulfovibrionales RepI... 230 3e-59 UniRef50_C1QE08 Ribonuclease n=1 Tax=Brachyspira murdochii DSM 1... 230 3e-59 UniRef50_C1FF37 Ribonuclease n=3 Tax=Mamiellales RepID=C1FF37_9CHLO 229 3e-59 UniRef50_A9B6H3 Ribonuclease HII n=1 Tax=Herpetosiphon aurantiac... 229 3e-59 UniRef50_C6X037 Ribonuclease n=1 Tax=Flavobacteriaceae bacterium... 229 4e-59 UniRef50_Q0AMK3 Ribonuclease HII n=3 Tax=Proteobacteria RepID=RN... 229 6e-59 UniRef50_A0LMM5 Ribonuclease HII n=10 Tax=Bacteria RepID=RNH2_SYNFM 228 9e-59 UniRef50_C4V2D5 Ribonuclease n=2 Tax=Clostridiales RepID=C4V2D5_... 228 1e-58 UniRef50_C6BVQ6 Ribonuclease n=4 Tax=Desulfovibrionales RepID=C6... 228 1e-58 UniRef50_D1VVL3 Ribonuclease n=1 Tax=Peptoniphilus lacrimalis 31... 226 3e-58 UniRef50_C3MHC0 Ribonuclease HII n=12 Tax=Alphaproteobacteria Re... 226 3e-58 UniRef50_Q5FFD4 Ribonuclease HII n=5 Tax=Rickettsiales RepID=RNH... 226 3e-58 UniRef50_Q8YP68 Ribonuclease HII n=19 Tax=Cyanobacteria RepID=RN... 226 3e-58 UniRef50_Q2SRV0 Ribonuclease HII n=5 Tax=Mollicutes RepID=RNH2_M... 226 3e-58 UniRef50_O67768 Ribonuclease HII n=3 Tax=Aquificaceae RepID=RNH2... 226 5e-58 UniRef50_Q11R91 Ribonuclease HII n=55 Tax=Bacteroidetes RepID=RN... 225 5e-58 UniRef50_Q0SSB4 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2... 225 7e-58 UniRef50_A8MHC7 Ribonuclease HII n=3 Tax=Firmicutes RepID=RNH2_A... 225 7e-58 UniRef50_C9LMH5 Ribonuclease n=1 Tax=Dialister invisus DSM 15470... 224 2e-57 UniRef50_Q6MLA0 Ribonuclease HII n=1 Tax=Bdellovibrio bacteriovo... 224 2e-57 UniRef50_A5N820 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2... 223 2e-57 UniRef50_A9TVJ6 Ribonuclease n=2 Tax=cellular organisms RepID=A9... 223 3e-57 UniRef50_A3ER37 Ribonuclease n=2 Tax=Leptospirillum sp. Group II... 223 3e-57 UniRef50_Q6NGJ8 Ribonuclease HII n=1 Tax=Corynebacterium diphthe... 223 3e-57 UniRef50_Q5PBG2 Ribonuclease HII n=6 Tax=Anaplasmataceae RepID=R... 223 4e-57 UniRef50_Q7VRD2 Ribonuclease HII n=1 Tax=Candidatus Blochmannia ... 222 5e-57 UniRef50_Q14PF8 Ribonuclease n=1 Tax=Spiroplasma citri RepID=Q14... 222 6e-57 UniRef50_A1HN67 Ribonuclease n=3 Tax=Veillonellaceae RepID=A1HN6... 222 7e-57 UniRef50_C0GQX3 Ribonuclease n=1 Tax=Desulfonatronospira thiodis... 222 7e-57 UniRef50_Q03S83 Ribonuclease HII n=39 Tax=Lactobacillaceae RepID... 222 7e-57 UniRef50_A5HUH4 Ribonuclease n=1 Tax=uncultured bacterium RepID=... 221 8e-57 UniRef50_C5RBD5 Ribonuclease n=1 Tax=Weissella paramesenteroides... 221 1e-56 UniRef50_A5IZB4 Ribonuclease n=1 Tax=Mycoplasma agalactiae PG2 R... 221 1e-56 UniRef50_Q04F44 Ribonuclease n=2 Tax=Oenococcus oeni RepID=Q04F4... 220 2e-56 UniRef50_B2V752 Ribonuclease HII n=3 Tax=Sulfurihydrogenibium Re... 220 2e-56 UniRef50_C4LJB6 Ribonuclease n=1 Tax=Corynebacterium kroppensted... 219 3e-56 UniRef50_C1AAT1 Ribonuclease n=1 Tax=Gemmatimonas aurantiaca T-2... 219 4e-56 UniRef50_D2SE00 Ribonuclease H n=2 Tax=Actinomycetales RepID=D2S... 218 6e-56 UniRef50_D0RRM6 Ribonuclease n=1 Tax=alpha proteobacterium HIMB1... 218 7e-56 UniRef50_C7RDQ2 Ribonuclease n=6 Tax=Clostridiales Family XI. In... 218 8e-56 UniRef50_Q2GD69 Ribonuclease HII n=2 Tax=Neorickettsia RepID=RNH... 218 8e-56 UniRef50_C7MNC1 Ribonuclease n=2 Tax=Coriobacteriaceae RepID=C7M... 218 8e-56 UniRef50_C6XGP6 Ribonuclease n=1 Tax=Candidatus Liberibacter asi... 218 1e-55 UniRef50_B9ZNV1 Ribonuclease n=1 Tax=Thioalkalivibrio sp. K90mix... 218 1e-55 UniRef50_Q5SLU5 Ribonuclease HII n=8 Tax=Deinococci RepID=RNH2_T... 217 2e-55 UniRef50_Q11KH2 Ribonuclease HII n=47 Tax=Alphaproteobacteria Re... 216 3e-55 UniRef50_D1CBL6 Ribonuclease n=1 Tax=Thermobaculum terrenum ATCC... 216 3e-55 UniRef50_D1BMP6 Ribonuclease n=3 Tax=Veillonella RepID=D1BMP6_VEIPT 216 3e-55 UniRef50_A0QV44 Ribonuclease HII n=27 Tax=Actinomycetales RepID=... 216 4e-55 UniRef50_A5PBF7 Ribonuclease n=2 Tax=Erythrobacter RepID=A5PBF7_... 215 5e-55 UniRef50_B6BS88 Ribonuclease n=1 Tax=Candidatus Pelagibacter sp.... 215 6e-55 UniRef50_B7IF45 Ribonuclease HII n=3 Tax=Thermotogaceae RepID=RN... 215 7e-55 UniRef50_A8RBU7 Ribonuclease n=4 Tax=Erysipelotrichaceae RepID=A... 215 7e-55 UniRef50_Q8RDX3 Ribonuclease HII n=12 Tax=Fusobacterium RepID=RN... 214 2e-54 UniRef50_C0E2A8 Ribonuclease n=2 Tax=Corynebacterium matruchotii... 214 2e-54 UniRef50_D2RIH6 Ribonuclease H n=2 Tax=Acidaminococcus RepID=D2R... 213 2e-54 UniRef50_B0JV09 Ribonuclease HII n=3 Tax=Chroococcales RepID=RNH... 213 2e-54 UniRef50_C9RN38 Ribonuclease n=1 Tax=Fibrobacter succinogenes su... 213 2e-54 UniRef50_D0L036 Ribonuclease n=1 Tax=Halothiobacillus neapolitan... 213 3e-54 UniRef50_Q7U4C6 Ribonuclease HII n=18 Tax=Cyanobacteria RepID=RN... 213 3e-54 UniRef50_A5WDY2 Ribonuclease HII n=1 Tax=Psychrobacter sp. PRwf-... 213 4e-54 UniRef50_Q73MG1 Ribonuclease HII n=1 Tax=Treponema denticola Rep... 213 4e-54 UniRef50_D1N706 Ribonuclease n=1 Tax=Victivallis vadensis ATCC B... 212 5e-54 UniRef50_Q313K1 Ribonuclease HII n=7 Tax=Desulfovibrio RepID=RNH... 212 7e-54 UniRef50_C2C194 Ribonuclease n=1 Tax=Listeria grayi DSM 20601 Re... 211 8e-54 UniRef50_A5CDI4 Ribonuclease HII n=17 Tax=Rickettsieae RepID=RNH... 211 9e-54 UniRef50_C6HV29 Ribonuclease n=1 Tax=Leptospirillum ferrodiazotr... 211 1e-53 UniRef50_Q4FT93 Ribonuclease HII n=2 Tax=Psychrobacter RepID=RNH... 211 2e-53 UniRef50_A3VNV1 Ribonuclease n=1 Tax=Parvularcula bermudensis HT... 210 2e-53 UniRef50_B0TH73 Ribonuclease n=1 Tax=Heliobacterium modesticaldu... 210 2e-53 UniRef50_Q6AJE5 Ribonuclease HII n=1 Tax=Desulfotalea psychrophi... 209 3e-53 UniRef50_Q4A278 Putative ribonuclease n=2 Tax=dsDNA viruses, no ... 209 3e-53 UniRef50_C8PZH5 Ribonuclease n=1 Tax=Enhydrobacter aerosaccus SK... 209 4e-53 UniRef50_A9NF30 Ribonuclease HII n=2 Tax=Bacteria RepID=RNH2_ACHLI 209 4e-53 UniRef50_A8EVA1 Ribonuclease HII n=4 Tax=Epsilonproteobacteria R... 209 4e-53 UniRef50_C1SJ31 Ribonuclease n=1 Tax=Denitrovibrio acetiphilus D... 209 5e-53 UniRef50_B2S1N3 Ribonuclease HII n=2 Tax=Borrelia RepID=RNH2_BORHD 208 7e-53 UniRef50_A9H3E2 Ribonuclease HII n=10 Tax=Acetobacteraceae RepID... 208 1e-52 UniRef50_A6WW84 Ribonuclease HII n=4 Tax=Rhizobiales RepID=RNH2_... 207 2e-52 UniRef50_A8TXS8 Ribonuclease n=1 Tax=alpha proteobacterium BAL19... 207 2e-52 UniRef50_D2LBW7 Ribonuclease H n=1 Tax=Rhodomicrobium vannielii ... 207 2e-52 UniRef50_B7FYE5 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tr... 206 2e-52 UniRef50_Q7UZZ2 Ribonuclease HII n=7 Tax=Prochlorococcus marinus... 206 3e-52 UniRef50_D1B6E3 Ribonuclease n=2 Tax=Synergistaceae RepID=D1B6E3... 206 3e-52 UniRef50_B3DVH3 Ribonuclease n=1 Tax=Methylacidiphilum infernoru... 205 6e-52 UniRef50_A6W7V4 Ribonuclease HII n=5 Tax=Actinomycetales RepID=R... 205 6e-52 UniRef50_Q1IMM1 Ribonuclease HII n=2 Tax=Acidobacteria RepID=RNH... 204 1e-51 UniRef50_C2MC66 Ribonuclease n=1 Tax=Porphyromonas uenonis 60-3 ... 203 3e-51 UniRef50_A9BI79 Ribonuclease n=1 Tax=Petrotoga mobilis SJ95 RepI... 202 5e-51 UniRef50_C8PH70 Ribonuclease n=1 Tax=Campylobacter gracilis RM32... 201 9e-51 UniRef50_A0JXT5 Ribonuclease HII n=4 Tax=Micrococcaceae RepID=RN... 201 1e-50 UniRef50_A4ECJ3 Ribonuclease n=3 Tax=Collinsella RepID=A4ECJ3_9ACTN 199 3e-50 UniRef50_A7I0I5 Ribonuclease HII n=7 Tax=Campylobacter RepID=RNH... 199 4e-50 UniRef50_C0A3Z9 Ribonuclease n=1 Tax=Opitutaceae bacterium TAV2 ... 199 4e-50 UniRef50_C7PK08 Ribonuclease n=23 Tax=Bacteria RepID=C7PK08_CHIPD 199 5e-50 UniRef50_C7MB80 Ribonuclease n=1 Tax=Brachybacterium faecium DSM... 197 2e-49 UniRef50_Q04SW6 Ribonuclease n=4 Tax=Leptospira RepID=Q04SW6_LEPBJ 196 3e-49 UniRef50_A7IES2 Ribonuclease HII n=10 Tax=Proteobacteria RepID=R... 196 4e-49 UniRef50_Q30TX0 Ribonuclease n=4 Tax=Helicobacteraceae RepID=Q30... 196 5e-49 UniRef50_C7R325 Ribonuclease n=2 Tax=Micrococcineae RepID=C7R325... 194 1e-48 UniRef50_Q0SPB8 Ribonuclease HII n=18 Tax=Bacteria RepID=RNH2_BORAP 194 1e-48 UniRef50_Q67PD4 Ribonuclease HII 1 n=1 Tax=Symbiobacterium therm... 194 2e-48 UniRef50_A8SLV4 Ribonuclease n=2 Tax=Clostridiales Family XI. In... 194 2e-48 UniRef50_Q8EUA9 Ribonuclease n=1 Tax=Mycoplasma penetrans RepID=... 193 2e-48 UniRef50_B9L043 Ribonuclease n=1 Tax=Thermomicrobium roseum DSM ... 193 3e-48 UniRef50_B8HA90 Ribonuclease n=2 Tax=Arthrobacter RepID=B8HA90_A... 193 3e-48 UniRef50_C8WAJ0 Ribonuclease n=2 Tax=Atopobium RepID=C8WAJ0_ATOPD 193 4e-48 UniRef50_C7MY90 Ribonuclease n=3 Tax=Actinomycetales RepID=C7MY9... 193 4e-48 UniRef50_B1ZMV3 Ribonuclease n=1 Tax=Opitutus terrae PB90-1 RepI... 192 6e-48 UniRef50_B0S8P2 Ribonuclease n=2 Tax=Leptospira biflexa serovar ... 192 7e-48 UniRef50_B3T7B1 Putative Ribonuclease HII n=1 Tax=uncultured mar... 191 8e-48 UniRef50_Q6KH21 Ribonuclease n=1 Tax=Mycoplasma mobile RepID=Q6K... 191 9e-48 UniRef50_Q9ZJR1 Ribonuclease HII n=15 Tax=Helicobacteraceae RepI... 191 1e-47 UniRef50_Q13BU3 Ribonuclease HII n=19 Tax=Bacteria RepID=RNH2_RHOPS 188 8e-47 UniRef50_B9L797 Ribonuclease n=3 Tax=Epsilonproteobacteria RepID... 188 1e-46 UniRef50_A4S5U9 Ribonuclease (Fragment) n=1 Tax=Ostreococcus luc... 187 2e-46 UniRef50_UPI000051041B ribonuclease HII n=1 Tax=Brevibacterium l... 185 6e-46 UniRef50_B6YVT5 Ribonuclease HII n=10 Tax=Euryarchaeota RepID=RN... 181 9e-45 UniRef50_B6BTW0 Ribonuclease n=1 Tax=beta proteobacterium KB13 R... 181 1e-44 UniRef50_A7H1A3 Ribonuclease HII n=16 Tax=Campylobacter RepID=RN... 180 2e-44 UniRef50_B4U9C0 Ribonuclease n=1 Tax=Hydrogenobaculum sp. Y04AAS... 180 3e-44 UniRef50_Q3XZB5 Ribonuclease n=1 Tax=Enterococcus faecium DO Rep... 179 4e-44 UniRef50_C5LZG5 Ribonuclease n=5 Tax=Eukaryota RepID=C5LZG5_9ALVE 179 5e-44 UniRef50_B1LVZ9 Ribonuclease n=9 Tax=Alphaproteobacteria RepID=B... 178 8e-44 UniRef50_A5FW78 Ribonuclease HII n=3 Tax=Alphaproteobacteria Rep... 177 2e-43 UniRef50_C7LXT7 Ribonuclease n=1 Tax=Acidimicrobium ferrooxidans... 177 2e-43 UniRef50_C8WGY3 Ribonuclease n=3 Tax=Coriobacteriaceae RepID=C8W... 176 4e-43 UniRef50_C1RMG0 Ribonuclease n=1 Tax=Cellulomonas flavigena DSM ... 174 1e-42 UniRef50_A4J2Z7 Ribonuclease n=1 Tax=Desulfotomaculum reducens M... 174 2e-42 UniRef50_UPI000197799D ribonuclease HII n=1 Tax=Helicobacter cin... 173 4e-42 UniRef50_O75792 Ribonuclease H2 subunit A n=20 Tax=Chordata RepI... 173 4e-42 UniRef50_C3XGM9 Ribonuclease n=1 Tax=Helicobacter bilis ATCC 438... 172 8e-42 UniRef50_B5Y443 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tr... 171 1e-41 UniRef50_UPI00019264AB PREDICTED: similar to ribonuclease H2, la... 169 3e-41 UniRef50_Q468N6 Ribonuclease HII n=4 Tax=Methanosarcinaceae RepI... 169 5e-41 UniRef50_Q82KF0 Ribonuclease HII n=15 Tax=Actinomycetales RepID=... 169 6e-41 UniRef50_D2NTN7 Ribonuclease HII n=2 Tax=Rothia mucilaginosa Rep... 169 7e-41 UniRef50_B1VXS2 Ribonuclease HII n=10 Tax=Actinomycetales RepID=... 169 7e-41 UniRef50_UPI00006CE52A ribonuclease HII family protein n=1 Tax=T... 168 1e-40 UniRef50_A2DUE3 Ribonuclease n=1 Tax=Trichomonas vaginalis RepID... 167 1e-40 UniRef50_A7I9P7 Ribonuclease HII n=4 Tax=Methanomicrobiales RepI... 167 2e-40 UniRef50_Q7VK86 Ribonuclease n=1 Tax=Helicobacter hepaticus RepI... 167 2e-40 UniRef50_B6ACV8 Ribonuclease n=1 Tax=Cryptosporidium muris RN66 ... 167 3e-40 UniRef50_Q9SEZ6 Ribonuclease H2 subunit A n=9 Tax=Embryophyta Re... 164 1e-39 UniRef50_B3L7H0 Ribonuclease n=8 Tax=Aconoidasida RepID=B3L7H0_P... 164 1e-39 UniRef50_D0YUF0 Ribonuclease n=2 Tax=Mobiluncus mulieris RepID=D... 164 2e-39 UniRef50_A5ULV6 Ribonuclease HII n=3 Tax=Methanobacteriaceae Rep... 162 6e-39 UniRef50_UPI0001C31AB6 Ribonuclease H n=1 Tax=Conexibacter woese... 161 1e-38 UniRef50_UPI000038E392 ribonuclease HII n=1 Tax=Ferroplasma acid... 161 1e-38 UniRef50_B8C6T8 Ribonuclease n=1 Tax=Thalassiosira pseudonana Re... 161 1e-38 UniRef50_Q7ZUZ9 Ribonuclease n=9 Tax=Coelomata RepID=Q7ZUZ9_DANRE 161 2e-38 UniRef50_UPI0001C41F2F ribonuclease HII RnhB n=1 Tax=Methanobrev... 160 2e-38 UniRef50_A8NUD1 Ribonuclease n=2 Tax=Agaricales RepID=A8NUD1_COPC7 159 3e-38 UniRef50_A2BL34 Ribonuclease HII n=1 Tax=Hyperthermus butylicus ... 159 4e-38 UniRef50_B7FSR6 Ribonuclease n=2 Tax=Bacillariophyta RepID=B7FSR... 159 7e-38 UniRef50_A1RYM0 Ribonuclease HII n=1 Tax=Thermofilum pendens Hrk... 159 7e-38 UniRef50_B5JFA5 Ribonuclease n=1 Tax=Verrucomicrobiae bacterium ... 157 1e-37 UniRef50_Q54D13 Ribonuclease H2 subunit A n=1 Tax=Dictyostelium ... 157 2e-37 UniRef50_Q53QG3 Ribonuclease n=2 Tax=Oryza sativa RepID=Q53QG3_O... 157 2e-37 UniRef50_C4VBD8 Ribonuclease n=1 Tax=Nosema ceranae BRL01 RepID=... 157 2e-37 UniRef50_Q4JA60 Ribonuclease HII n=12 Tax=Sulfolobaceae RepID=RN... 157 2e-37 UniRef50_A0ZZY2 Ribonuclease n=11 Tax=Bifidobacteriaceae RepID=A... 157 2e-37 UniRef50_A8MAH5 Ribonuclease HII n=2 Tax=Thermoproteaceae RepID=... 157 2e-37 UniRef50_Q9P5X8 Ribonuclease H2 subunit A n=26 Tax=Leotiomyceta ... 156 3e-37 UniRef50_C8PNM3 Ribonuclease n=1 Tax=Treponema vincentii ATCC 35... 156 5e-37 UniRef50_Q6C813 Ribonuclease n=1 Tax=Yarrowia lipolytica RepID=Q... 155 7e-37 UniRef50_Q10236 Ribonuclease H2 subunit A n=2 Tax=Schizosaccharo... 155 7e-37 UniRef50_Q8SSA4 Ribonuclease n=1 Tax=Encephalitozoon cuniculi Re... 155 8e-37 UniRef50_Q1AW72 Ribonuclease n=1 Tax=Rubrobacter xylanophilus DS... 155 9e-37 UniRef50_Q9U6P6 Ribonuclease H2 subunit A n=2 Tax=Caenorhabditis... 154 1e-36 UniRef50_Q9VPP5 Ribonuclease H2 subunit A n=38 Tax=Eukaryota Rep... 154 1e-36 Sequences not found previously or not previously below threshold: >UniRef50_C5D8U9 Ribonuclease HII n=118 Tax=Bacteria RepID=RNH2_GEOSW Length = 277 Score = 269 bits (688), Expect = 4e-71, Method: Composition-based stats. Identities = 89/196 (45%), Positives = 119/196 (60%), Gaps = 1/196 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + + +AG+DE GRGPL G VV AAV+L I GLNDSKKLSE +R L+ I+ Sbjct: 65 QLFEQGIEYIAGIDEAGRGPLAGPVVAAAVMLPKDAYIPGLNDSKKLSEAKREMLFHMIQ 124 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 A+S +G EIDE+NI AT AM +AV L P+Y+LID P + P ++ Sbjct: 125 SCAISIGIGVVTAAEIDEMNIYEATKKAMIKAVEQLSPKPDYLLIDAMTLP-ISTPQQSI 183 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD+ I+A+SI+AKVTRD M L +PQYGF ++ GY TA HLE + +G + Sbjct: 184 VKGDANSVSIAASSIIAKVTRDHFMKQLAKQYPQYGFEKNMGYGTAQHLEAIRVYGTIDE 243 Query: 183 HRRSFGPVKRALGLAS 198 HRRSF P+K + + Sbjct: 244 HRRSFSPIKEMIEMKK 259 >UniRef50_Q6MDG7 Ribonuclease HII n=11 Tax=Chlamydiales RepID=RNH2_PARUW Length = 222 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 88/193 (45%), Positives = 114/193 (59%), Gaps = 1/193 (0%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK-E 63 QL+AG+DE GRGPL G VV AA IL + +NDSKKLS K R L+E + + Sbjct: 24 FSQGYQLIAGIDEAGRGPLAGPVVAAACILPKGLLVPQINDSKKLSPKVRERLFERLTTD 83 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 A+ + +G EID +NI AT+LAM A+ L + P+YVL+DG P +P + ++ Sbjct: 84 SAVRYGIGIIGQAEIDRVNIYQATILAMLMAIQQLPVTPDYVLVDGMNLPHPDLPCLKII 143 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGD I+AASI+AK TRD M +P YGF QHKGY T HLE L + G H Sbjct: 144 KGDQLSQSIAAASIIAKETRDRLMCQYHREWPGYGFNQHKGYATELHLEALFKQGPCPIH 203 Query: 184 RRSFGPVKRALGL 196 RRSF P+K L + Sbjct: 204 RRSFDPIKSMLEV 216 >UniRef50_C8W5A6 Ribonuclease n=3 Tax=Bacteria RepID=C8W5A6_DESAS Length = 268 Score = 266 bits (681), Expect = 3e-70, Method: Composition-based stats. Identities = 97/191 (50%), Positives = 120/191 (62%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 ++ L+AGVDE GRGPL G VV AAVIL + GLNDSKKL R L+ IK Sbjct: 67 KYRSKGFGLIAGVDEAGRGPLAGPVVAAAVILPENACLPGLNDSKKLPVSARERLFVAIK 126 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 ALSW++G A EI ELNIL A++LAM R+V L + P++VL+DG LP+P ++ Sbjct: 127 PIALSWAVGMASVEEICELNILQASLLAMCRSVDSLKVKPDFVLVDGPNGLNLPLPQYSL 186 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD+ I++ASILAKVTRD M FP+YGF +HKGYPT HL L +G Sbjct: 187 VKGDTLSASIASASILAKVTRDKIMLEYHDEFPEYGFDRHKGYPTVEHLRALTRYGPCRI 246 Query: 183 HRRSFGPVKRA 193 HRR F PVK Sbjct: 247 HRRDFKPVKDF 257 >UniRef50_D1R4X2 Ribonuclease n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4X2_9CHLA Length = 232 Score = 264 bits (675), Expect = 1e-69, Method: Composition-based stats. Identities = 89/196 (45%), Positives = 117/196 (59%), Gaps = 1/196 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + +LVAGVDE GRGPL G VV AA IL P + G+NDSKKL+ ++R L++EI Sbjct: 31 KARRQGYKLVAGVDEAGRGPLAGPVVAAACILPPRFRVPGVNDSKKLTPQKRAQLFQEIT 90 Query: 63 EKA-LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 + + +G ID +NIL AT+ AM AV L P+ +L+DG + P +P Sbjct: 91 THPKVIYGVGIVATEIIDTINILQATIQAMLDAVNQLSSQPQALLVDGLQLPHPVIPCQK 150 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++ GDS I+AASI+AK TRD M LD +P YGFAQHKGY T HL+ L EHG Sbjct: 151 LIHGDSLSLCIAAASIIAKETRDRLMVELDQQWPAYGFAQHKGYGTQQHLDALREHGPCP 210 Query: 182 HHRRSFGPVKRALGLA 197 HR++F P+K A Sbjct: 211 IHRKTFEPIKSMFAEA 226 >UniRef50_B1GZ18 Ribonuclease HII n=11 Tax=Bacteria RepID=RNH2_UNCTG Length = 210 Score = 264 bits (675), Expect = 1e-69, Method: Composition-based stats. Identities = 92/196 (46%), Positives = 112/196 (57%), Gaps = 1/196 (0%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 F VAG+DE GRGPL G VV A VIL I LNDSK+LSEK+R L+E IKE Sbjct: 12 FYNKGFYPVAGIDEAGRGPLAGPVVAAVVILPKDSAIPYLNDSKQLSEKKREILFEIIKE 71 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAV 122 AL +++ IDE+NIL AT LAM RAV L P+ LIDGNR L + Sbjct: 72 TALDYAVELVNNEIIDEINILQATFLAMSRAVLKLKTQPDLYLIDGNRKVHGLSFNQETI 131 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 V GD++ I+AASILAKV+RD M +P Y F +HKGY T H+E L +HG Sbjct: 132 VGGDAKSACIAAASILAKVSRDKMMLEYAKQYPVYEFEKHKGYGTKKHIEALKKHGICPI 191 Query: 183 HRRSFGPVKRALGLAS 198 HR +F PV + Sbjct: 192 HRLTFSPVNDIISQTK 207 >UniRef50_A7H722 Ribonuclease HII n=9 Tax=Bacteria RepID=RNH2_ANADF Length = 315 Score = 263 bits (672), Expect = 3e-69, Method: Composition-based stats. Identities = 96/195 (49%), Positives = 119/195 (61%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E LVAGVDE G PL G VV A IL G++DSK+L + R L E+IK Sbjct: 71 ELWDGGVTLVAGVDEAGMAPLAGPVVAGACILPRDYRPRGIDDSKQLDRRERERLAEDIK 130 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 A+ W++ RAE EID LNI A +LA+ RAV L AP +VL+D + P+L +P + Sbjct: 131 ANAVCWAVARAEVEEIDRLNIYRAGLLALTRAVQALTPAPGHVLVDARKLPELRLPQTPI 190 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 + GD+ I+AASILAK TRD M LD ++P YGF HKGYPTA H + L GA Sbjct: 191 IHGDALSLTIAAASILAKTTRDELMGELDALYPGYGFCNHKGYPTAEHFQALERLGACPI 250 Query: 183 HRRSFGPVKRALGLA 197 HRRSF PV+ ALGLA Sbjct: 251 HRRSFQPVREALGLA 265 >UniRef50_A1TN83 Ribonuclease HII n=11 Tax=Proteobacteria RepID=RNH2_ACIAC Length = 240 Score = 261 bits (669), Expect = 7e-69, Method: Composition-based stats. Identities = 115/184 (62%), Positives = 130/184 (70%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 LVAGVDE GRGPL G VV AAVILD +PI GL DSK L+ RR AL++EI+ KAL S+ Sbjct: 22 LVAGVDEAGRGPLAGPVVAAAVILDELQPIEGLADSKTLTAARREALFDEIRAKALCCSV 81 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 A EID LNIL ATMLAM+RAVAGL + P VL+DGNR P L +PA A+VKGD+ V Sbjct: 82 AEATVEEIDTLNILQATMLAMRRAVAGLRLKPVRVLVDGNRLPPLDVPAEAIVKGDALVQ 141 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ISAASILAKVTRD A L +P YGFA HKGY TA H+ L HGA HRRSF PV Sbjct: 142 AISAASILAKVTRDRWCAQLHEAYPHYGFASHKGYGTAEHMAALQAHGACPEHRRSFAPV 201 Query: 191 KRAL 194 A+ Sbjct: 202 AAAV 205 >UniRef50_B0K1U0 Ribonuclease n=12 Tax=Bacteria RepID=B0K1U0_THEPX Length = 242 Score = 260 bits (665), Expect = 2e-68, Method: Composition-based stats. Identities = 85/192 (44%), Positives = 124/192 (64%), Gaps = 2/192 (1%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + + +AGVDE GRGPLVG VV A VIL I +NDSKKLSE++R L E IK Sbjct: 51 QLYQLNLNFIAGVDEAGRGPLVGPVVAACVILPKEVFIPEINDSKKLSEEKREVLSEVIK 110 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 + A+S+++G + EID++NIL+AT AMQ A++ + +Y+L+D P++ + A+ Sbjct: 111 KVAISYAIGIVDCEEIDKINILNATYKAMQIAISKIQQKIDYLLVDAITIPQIEINQKAI 170 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGDS+ I+AASILAKV RD M ++PQY F ++KGY T H+E L ++G Sbjct: 171 VKGDSKSISIAAASILAKVERDKIMKEYHKIYPQYNFEKNKGYGTKEHIEALKKYGPCPI 230 Query: 183 HRRSFGPVKRAL 194 HR++F +++ L Sbjct: 231 HRKTF--IEKIL 240 >UniRef50_B5EBC6 Ribonuclease HII n=5 Tax=Deltaproteobacteria RepID=RNH2_GEOBB Length = 230 Score = 260 bits (665), Expect = 2e-68, Method: Composition-based stats. Identities = 86/192 (44%), Positives = 117/192 (60%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + + +AG+DE GRGPL G VV AAV+L + G+NDSK+L+E++R L++ I Sbjct: 21 QALRRGYFRIAGIDEAGRGPLAGPVVAAAVMLPAGLLLPGVNDSKQLTEEKREELFDVIH 80 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 +AL+ +G + +D +NIL AT+ AM+ AV L I P ++LIDG + +P V Sbjct: 81 REALAVGVGIGDHALVDSINILQATLSAMRDAVRALSITPGFLLIDGISNIPMNIPQRTV 140 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 KGDS I+AASI+AKVTRD M D +P YGFA HKGY A HL +AE G Sbjct: 141 KKGDSLSLSIAAASIIAKVTRDRMMVEYDAQYPGYGFASHKGYGAASHLAAIAELGPCPI 200 Query: 183 HRRSFGPVKRAL 194 HR++F VK L Sbjct: 201 HRKTFSGVKEHL 212 >UniRef50_UPI00017443D3 Ribonuclease H n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017443D3 Length = 233 Score = 260 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 95/193 (49%), Positives = 118/193 (61%), Gaps = 1/193 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 +E Q+VAGVDE GRGPL G V AAVIL A L+DSK+L+E RR +Y+E+ Sbjct: 34 MELRQEGHQVVAGVDEAGRGPLAGPVSVAAVILPDDFTHAELHDSKQLTELRRERIYDEL 93 Query: 62 KEKA-LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 +A + W E EID +NIL AT + M+RAV GL + P VLIDG P P+P Sbjct: 94 MGRADVLWCHVMVEVDEIDRINILQATRMGMRRAVQGLSMLPHAVLIDGTPVPDFPVPHR 153 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 A+VKGD+ I+AAS++AKV RD M + +P YGF QHKGY T HLE L HG Sbjct: 154 ALVKGDALSLSIAAASVIAKVARDRLMRQAALDYPVYGFDQHKGYGTPEHLEALRRHGPC 213 Query: 181 EHHRRSFGPVKRA 193 HRRSF PV + Sbjct: 214 PLHRRSFSPVSQL 226 >UniRef50_A3DDG7 Ribonuclease HII n=6 Tax=Bacteria RepID=RNH2_CLOTH Length = 256 Score = 259 bits (662), Expect = 4e-68, Method: Composition-based stats. Identities = 84/185 (45%), Positives = 118/185 (63%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E +L+AG+DE GRGPL G VV AAVIL I GLNDSKKL+E +R L++ I Sbjct: 66 EAYQRGYKLIAGIDEAGRGPLAGPVVAAAVILPQDVFIEGLNDSKKLTENQREKLFDVIN 125 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 +KA+ +G + +IDE+NIL+AT AM+ AV L P+ + ID + + + ++ Sbjct: 126 DKAIGVGIGIVDEKQIDEINILNATKKAMKLAVGNLKPVPDILFIDSLKLDDINIEQNSI 185 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD++ I+AASI+AKVTRD + +D +P YGFA+HKGY T H+E + ++G Sbjct: 186 VKGDAKSVSIAAASIIAKVTRDRILREMDKKYPMYGFARHKGYGTGEHIEAIKKYGICPI 245 Query: 183 HRRSF 187 HR SF Sbjct: 246 HRVSF 250 >UniRef50_Q5WFP1 Ribonuclease HII n=2 Tax=Bacillaceae RepID=RNH2_BACSK Length = 259 Score = 258 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 82/188 (43%), Positives = 112/188 (59%), Gaps = 1/188 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E V GVDEVGRGPL G V A IL + GL DSKKLS+ +R + I Sbjct: 62 ELKQRGYVAVCGVDEVGRGPLAGPVTACACILPDDFQLLGLTDSKKLSKAKREEYAKMIS 121 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E+A+++S+ EIDE+NIL AT AM +A+ GL +++L+D R +P+ ++ Sbjct: 122 EQAVAYSIASVSAAEIDEINILQATKKAMTKAINGLSQKTDHLLLDAVRL-DVPIAQTSL 180 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD++ I+A+S+LAKV RD M L +P YGF H GY TA HL+ L +G T Sbjct: 181 IKGDAKSLSIAASSVLAKVWRDRYMEELAQTYPGYGFDTHAGYGTASHLQALRTYGMTPE 240 Query: 183 HRRSFGPV 190 HR+SF PV Sbjct: 241 HRKSFRPV 248 >UniRef50_A9KLL7 Ribonuclease HII n=39 Tax=Bacteria RepID=RNH2_CLOPH Length = 254 Score = 257 bits (658), Expect = 1e-67, Method: Composition-based stats. Identities = 92/186 (49%), Positives = 122/186 (65%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 E YP + + G+DEVGRGPL G V+ AVIL I +NDSK+LSEK+R ALY+EI Sbjct: 62 YELSYPDYRYICGIDEVGRGPLAGPVIACAVILPKDCEILYINDSKQLSEKKREALYDEI 121 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 EKA+S +G A I+E+NIL AT AM+ A+ L + PE +L D PK+ +P + Sbjct: 122 MEKAISVGIGSASHARIEEINILQATYEAMRGAINKLGVVPELLLNDAVTIPKVVIPQVP 181 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++KGD++ I+AASI+AKVTRD M D VFP YGFA +KGY +A H++ L E G + Sbjct: 182 IIKGDAKSISIAAASIVAKVTRDRLMVEYDTVFPGYGFASNKGYGSADHIKALKELGPSP 241 Query: 182 HHRRSF 187 HR SF Sbjct: 242 IHRASF 247 >UniRef50_B2T5I0 Ribonuclease HII n=16 Tax=Proteobacteria RepID=RNH2_BURPP Length = 248 Score = 257 bits (658), Expect = 1e-67, Method: Composition-based stats. Identities = 107/185 (57%), Positives = 129/185 (69%), Gaps = 1/185 (0%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEEIKEKALSW 68 +V GVDE GRGPL G VV AAVI DP++P I GL+DSK L+ K+R LY++I ++AL++ Sbjct: 29 DIVCGVDEAGRGPLAGPVVAAAVIFDPSKPMIRGLDDSKVLTAKKRDELYDKIVDRALAY 88 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 + A EID LNILHATMLAM+RAV GL + P V IDGNRCP L + + AV+ GD+ Sbjct: 89 CIASATVEEIDSLNILHATMLAMKRAVEGLSVVPTLVKIDGNRCPTLSVRSEAVIGGDAL 148 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 V ISAASILAKVTRD + L P YGF H GY T HL+ L EHG EHHRRSF Sbjct: 149 VKSISAASILAKVTRDRMLLELHQTHPVYGFNAHAGYGTPQHLKALREHGPCEHHRRSFA 208 Query: 189 PVKRA 193 PV+ A Sbjct: 209 PVREA 213 >UniRef50_B1YS60 Ribonuclease HII n=13 Tax=cellular organisms RepID=RNH2_BURA4 Length = 217 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 116/195 (59%), Positives = 133/195 (68%), Gaps = 1/195 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 +F P ++V GVDE GRGPL G VV AAVILDPARPI GL+DSK LS K+R ALY+ I Sbjct: 19 FDFSRPD-EIVCGVDEAGRGPLAGPVVAAAVILDPARPIDGLDDSKALSAKKRDALYDLI 77 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 +A ++ + A EID LNILHATMLAM+RAV GL + P IDGNRCP L + A A Sbjct: 78 VARASAFCVASASVDEIDTLNILHATMLAMKRAVEGLSVLPTLAQIDGNRCPTLTVRAEA 137 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +V GD+ VP ISAASILAKVTRD + L FP YGF H GY T HL L EHG E Sbjct: 138 IVSGDALVPSISAASILAKVTRDRMLVDLHERFPVYGFNVHVGYSTPQHLAALREHGPCE 197 Query: 182 HHRRSFGPVKRALGL 196 HRRSF PV+ AL L Sbjct: 198 VHRRSFAPVREALDL 212 >UniRef50_Q18BC9 Ribonuclease HII n=15 Tax=Bacteria RepID=RNH2_CLOD6 Length = 255 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 90/192 (46%), Positives = 121/192 (63%), Gaps = 2/192 (1%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E + G+DE GRGPL G VV + V+ I G+NDSKKLSE +R L+E IK Sbjct: 66 EGYDKGYLYIGGIDEAGRGPLAGPVVASVVVFKKDTKIEGVNDSKKLSEAKRDELFEVIK 125 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E+AL + +G EIDE NIL+AT +AM++A+ L AP+Y+L+D P + + + Sbjct: 126 EEALDYGIGIVNNEEIDEFNILNATYMAMKKAINCLKKAPDYLLVDAATIPGIDISQNPI 185 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGDS+ I+AASILAKVTRD+ M D V+P+YGF HKGY T H E + ++G T Sbjct: 186 VKGDSKSISIAAASILAKVTRDSIMYQYDRVYPEYGFKSHKGYGTKEHYEAIEKYGITPI 245 Query: 183 HRRSFGPVKRAL 194 HR+SF +K L Sbjct: 246 HRKSF--LKNIL 255 >UniRef50_A8FY28 Ribonuclease HII n=14 Tax=Bacteria RepID=RNH2_SHESH Length = 213 Score = 256 bits (656), Expect = 2e-67, Method: Composition-based stats. Identities = 127/193 (65%), Positives = 142/193 (73%), Gaps = 8/193 (4%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L AGVDEVGRGPLVG VVTAAVILDP +PI GLNDSKKLSEK+R AL+ EI EKAL+ S+ Sbjct: 19 LYAGVDEVGRGPLVGNVVTAAVILDPTKPITGLNDSKKLSEKKREALFTEIHEKALAISI 78 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL--------PMPAMAV 122 G A P EIDELNILHATMLAMQRAVAGL +AP VL+DGNR P + + A+ Sbjct: 79 GYASPEEIDELNILHATMLAMQRAVAGLDMAPTSVLVDGNRTPDFSHGEDTDRNIESHAI 138 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD V ISAASI+AKV RD EM LD+ PQYGFA+HKGYPT H E LA HG Sbjct: 139 IKGDGLVAGISAASIVAKVIRDREMDLLDMEHPQYGFAKHKGYPTKAHFEALALHGVLPE 198 Query: 183 HRRSFGPVKRALG 195 HR+SF PVK L Sbjct: 199 HRKSFRPVKERLA 211 >UniRef50_C2ESF1 Ribonuclease n=5 Tax=Lactobacillaceae RepID=C2ESF1_9LACO Length = 260 Score = 256 bits (655), Expect = 3e-67, Method: Composition-based stats. Identities = 84/192 (43%), Positives = 114/192 (59%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 ++ Q VAG+DEVGRGPL G VVT AVIL P + G+ DSK+L+ R LY +I Sbjct: 68 QYWQQGCQYVAGMDEVGRGPLAGPVVTCAVILSPEFDLIGVTDSKQLTRHERENLYLQIV 127 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 +A+ S+ + +ID+LNI AT AM +V LH PE +++D P L +P + Sbjct: 128 NEAIEVSIAVNDSQKIDQLNIYAATQNAMMTSVRQLHHQPESLIVDAVPLPALDIPQTTL 187 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD + ++AASI+AK RD M D ++P Y FA++ GY T HL L + GAT Sbjct: 188 IKGDQKSISVAAASIVAKEYRDHLMRDYDRIYPGYDFAENMGYGTKKHLAGLRKLGATPI 247 Query: 183 HRRSFGPVKRAL 194 HRRSF PV L Sbjct: 248 HRRSFNPVPEYL 259 >UniRef50_A3NAT3 Ribonuclease HII n=37 Tax=Bacteria RepID=RNH2_BURP6 Length = 214 Score = 256 bits (654), Expect = 4e-67, Method: Composition-based stats. Identities = 115/195 (58%), Positives = 135/195 (69%), Gaps = 1/195 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 ++F P ++V GVDE GRGPL G VV AAV+LDPARPI GL+DSK LS K+R L++EI Sbjct: 19 LDFDAPG-EIVCGVDEAGRGPLAGPVVAAAVVLDPARPIVGLDDSKALSAKKRERLFDEI 77 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 AL++S+ A EID LNILHATMLAM+RAV GL + P IDGNRCP L + + A Sbjct: 78 VVHALAYSVASASVEEIDSLNILHATMLAMKRAVEGLSVLPTLAKIDGNRCPMLAIRSEA 137 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +V GD+ VP ISAASILAKVTRD + L FP YGF H GY T HL L EHG E Sbjct: 138 IVGGDALVPSISAASILAKVTRDRMLVELHQQFPMYGFDAHAGYGTPQHLAALREHGPCE 197 Query: 182 HHRRSFGPVKRALGL 196 HHRRSF PV+ A L Sbjct: 198 HHRRSFAPVREAFDL 212 >UniRef50_Q03Y48 Ribonuclease HII n=10 Tax=Lactobacillales RepID=RNH2_LEUMM Length = 253 Score = 255 bits (653), Expect = 5e-67, Method: Composition-based stats. Identities = 91/192 (47%), Positives = 120/192 (62%), Gaps = 1/192 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 ++ L+AGVDEVGRGPL G VV AAVIL + + DSK+LS K+R LY++I Sbjct: 63 QYWMQGYDLIAGVDEVGRGPLAGPVVAAAVILPHDFDVLDVIDSKQLSAKKRDELYDKII 122 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 EKA+S +GR E IDE+NI A +AM AV L PE +LID R L +P + Sbjct: 123 EKAISIGVGRVEASIIDEINIYEAARVAMTEAVNQLAPIPEALLIDAMRL-DLDLPQEFL 181 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD+R I AASI+AKVTRD MA+ + +P YGF ++ GY T HLE + + G T Sbjct: 182 IKGDARSNSIGAASIIAKVTRDRLMASYGLKYPGYGFEKNAGYGTKEHLEGIKKIGITPI 241 Query: 183 HRRSFGPVKRAL 194 HR++F P+K L Sbjct: 242 HRKTFAPIKDIL 253 >UniRef50_C5NXH7 Ribonuclease n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH7_9BACL Length = 258 Score = 255 bits (651), Expect = 8e-67, Method: Composition-based stats. Identities = 86/190 (45%), Positives = 119/190 (62%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 + + G+DEVGRGPL G VV AAVIL GLNDSKKLSEK+R LYE+I+++ Sbjct: 63 YNNGCKYICGIDEVGRGPLAGPVVAAAVILKKDNYFEGLNDSKKLSEKKREELYEQIRKE 122 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A+++++ + EI++ NI +A +AMQRAV L + P+++LID P+P ++VK Sbjct: 123 AVAYAICEVDNIEIEKYNIYNAARIAMQRAVEKLEVKPDFLLIDAMPFENYPIPNFSMVK 182 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD + I+AAS++AKV RD M +P Y F + GY T HLE L EHG T HR Sbjct: 183 GDEKSVSIAAASVIAKVYRDNLMKEYAKKYPHYDFENNAGYGTKKHLEGLKEHGVTPIHR 242 Query: 185 RSFGPVKRAL 194 R F P+K + Sbjct: 243 RDFEPIKSMI 252 >UniRef50_Q043R9 Ribonuclease HII n=22 Tax=Firmicutes RepID=RNH2_LACGA Length = 250 Score = 255 bits (651), Expect = 9e-67, Method: Composition-based stats. Identities = 91/189 (48%), Positives = 119/189 (62%), Gaps = 1/189 (0%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 + +QLVAGVDEVGRGPL G VVTAAVIL + +NDSKKLS K+R L+ +I K Sbjct: 61 FWQKSQLVAGVDEVGRGPLAGPVVTAAVILPHNFDLIDVNDSKKLSPKKRKELFPKILAK 120 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A+S S+G A ID +NI A LAM AV GL + P+ +L+D P L +P + ++ Sbjct: 121 AVSVSVGLANNDVIDRINIYEADRLAMAHAVQGLKVKPDALLVDAMNVP-LNIPQVKLIH 179 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD++ I+AASI+AKV RD M A V+P+Y F + GY T H+E L ++G T HR Sbjct: 180 GDAKSNSIAAASIVAKVFRDNLMDAYGEVYPEYDFKHNAGYGTREHMEALKKYGPTPIHR 239 Query: 185 RSFGPVKRA 193 RSF PV Sbjct: 240 RSFAPVSEY 248 >UniRef50_B5W7X5 Ribonuclease n=2 Tax=Arthrospira RepID=B5W7X5_SPIMA Length = 223 Score = 252 bits (644), Expect = 5e-66, Method: Composition-based stats. Identities = 93/189 (49%), Positives = 118/189 (62%), Gaps = 5/189 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLALYEEIKEKALS 67 VAG+DEVGRG G VV AAV L + G+ DSKKL+ RL+L I+ KA++ Sbjct: 31 VAGIDEVGRGAWFGPVVAAAVQLSETTILELAAAGVKDSKKLTHNDRLSLSTLIRSKAIA 90 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMAVVKGD 126 +G A EID LNIL AT LAM+R++ L P++ L+DGNR P L +P A+VKGD Sbjct: 91 CQIGWASAREIDRLNILQATQLAMRRSILKLQPPPQFCLVDGNRLIPNLSIPQQAIVKGD 150 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S I+A+SI+AKV RD M LD +PQYGFAQHKGY T H + L +G HHR S Sbjct: 151 SHCVVIAASSIVAKVWRDELMTRLDRTYPQYGFAQHKGYGTKQHKQALQSYGPCFHHRFS 210 Query: 187 FGPVKRALG 195 F PV++ Sbjct: 211 FAPVRQYFE 219 >UniRef50_D2MIZ6 Ribonuclease HII n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIZ6_9BACT Length = 216 Score = 251 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 90/192 (46%), Positives = 115/192 (59%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E + VAG+DE GRGPL G VV AAVI+ + L+DSKK+S R AL+ I Sbjct: 20 EARTRGYRRVAGLDEAGRGPLAGPVVGAAVIVPRRFSLRSLDDSKKVSPTEREALFSVIT 79 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E A +W +G A EID LN+L AT LA QRA+ L I P+++L+DG+ + +P +V Sbjct: 80 ESATAWGIGVASEAEIDSLNVLRATWLAWQRAINQLRIPPDFLLVDGHLGADVFIPHRSV 139 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 + GD I+AASILAKV RD M P+Y F HKGYPT HL L + G + Sbjct: 140 IHGDRLSSSIAAASILAKVFRDRIMCEYHERDPRYRFHIHKGYPTPEHLRLLRQFGPSPV 199 Query: 183 HRRSFGPVKRAL 194 HR SFGPV+R L Sbjct: 200 HRHSFGPVRRCL 211 >UniRef50_C0GHM4 Ribonuclease n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHM4_9FIRM Length = 260 Score = 250 bits (639), Expect = 2e-65, Method: Composition-based stats. Identities = 88/183 (48%), Positives = 115/183 (62%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 +AGVDE GRGPL G VV AVIL +AGLNDSKKL+ ++R LYE I + Sbjct: 71 REKGFTYIAGVDEAGRGPLAGPVVAGAVILPDNFFLAGLNDSKKLTPQKREELYEAITSE 130 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A++WS+G E EID++NIL A+ LAM RA+ L + P+Y L+D +LP VV Sbjct: 131 AVAWSVGIGEVWEIDDINILQASKLAMYRALLTLSVKPDYALLDALELEELPFAQQGVVG 190 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD I+AAS++AKVTRD M + ++P YGF+ HKGYPTA H +A+ G HR Sbjct: 191 GDGLSLSIAAASVVAKVTRDRLMCEQEKMYPGYGFSLHKGYPTAEHRSAIAKLGPCPIHR 250 Query: 185 RSF 187 +SF Sbjct: 251 KSF 253 >UniRef50_A6NUN5 Ribonuclease n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUN5_9BACE Length = 210 Score = 250 bits (639), Expect = 2e-65, Method: Composition-based stats. Identities = 89/183 (48%), Positives = 116/183 (63%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 QL+ G DE G GPL G V AVIL + GLNDSKK++ KRR L+EEI+EK Sbjct: 17 KERGYQLICGADEAGAGPLAGPVYAGAVILPEGLILEGLNDSKKVTPKRRDRLFEEIQEK 76 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A++W++ + EID +NIL+A M AM+ A+ L AP+Y LIDGNR + + VVK Sbjct: 77 AIAWAVASVDEKEIDAINILNARMKAMEMAIQALKPAPDYALIDGNRDKGITIAHETVVK 136 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD R I+AASILAKV+RD M + ++P+Y F +HKGY T H E L ++G HR Sbjct: 137 GDGRSANIAAASILAKVSRDRYMEEMAKLYPEYEFERHKGYGTKLHFELLMKYGPCPIHR 196 Query: 185 RSF 187 RSF Sbjct: 197 RSF 199 >UniRef50_C0EQ70 Ribonuclease n=2 Tax=Neisseria flavescens RepID=C0EQ70_NEIFL Length = 230 Score = 249 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 112/187 (59%), Positives = 134/187 (71%), Gaps = 1/187 (0%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGR 72 AGVDE GRGPLVG+V AAVIL + GL DSKKLSEK+R L + IKE+A++WS+ Sbjct: 40 AGVDEAGRGPLVGSVFAAAVILPEHFDLPGLTDSKKLSEKKRDMLAQMIKEQAVAWSIAF 99 Query: 73 AEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGDSRVPE 131 A+P EI +LNILHATM AM+RAV GL +AP+ V IDGNR P L +PA AVVKGDS++ E Sbjct: 100 ADPDEILKLNILHATMAAMKRAVEGLSVAPDKVWIDGNRVPKDLNVPAEAVVKGDSKIIE 159 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 ISAAS+LAK RDAEM L +PQYGF +HKGY TA HL L ++G HRR F PVK Sbjct: 160 ISAASVLAKTARDAEMYELAKRYPQYGFDRHKGYGTAQHLAALKQYGVLLEHRRDFAPVK 219 Query: 192 RALGLAS 198 L + Sbjct: 220 TLLAQGN 226 >UniRef50_B0SZF7 Ribonuclease HII n=6 Tax=Caulobacteraceae RepID=RNH2_CAUSK Length = 230 Score = 249 bits (636), Expect = 5e-65, Method: Composition-based stats. Identities = 101/185 (54%), Positives = 120/185 (64%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 LV GVDE GRGP G V AAVILDP+R GL+DSKKLS K R L EIK+ A++W + Sbjct: 31 LVCGVDEAGRGPWAGPVSAAAVILDPSRVPKGLDDSKKLSAKARAVLEIEIKQVAVAWCV 90 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A EI+ELNILHA LAM RA+ GL + P+ L+DGN +LP P V+KGDS Sbjct: 91 GLASIEEIEELNILHAAGLAMCRAIDGLSVKPDIALVDGNYRFELPCPIKTVIKGDSLSC 150 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAK RD M +D + P YGFA HKGY A H+E L G + HR S+ PV Sbjct: 151 SIAAASILAKEARDRIMVEMDALHPGYGFASHKGYHAAIHVEGLRRLGPSPIHRLSWAPV 210 Query: 191 KRALG 195 K AL Sbjct: 211 KLALA 215 >UniRef50_C4Z936 Ribonuclease n=4 Tax=Clostridiales RepID=C4Z936_EUBR3 Length = 253 Score = 248 bits (635), Expect = 5e-65, Method: Composition-based stats. Identities = 84/186 (45%), Positives = 113/186 (60%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 E Y + G+DEVGRGPL G VV AVIL I +NDSKKL+ +R LY+ I Sbjct: 63 YEREYASYAHICGIDEVGRGPLAGPVVACAVILPKDCDILYINDSKKLTAAKRDELYDVI 122 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 EKA+S +G A IDE+NIL AT AM++A+ L AP+ L D P + + + Sbjct: 123 MEKAVSVGIGMASHERIDEINILQATYEAMRQAIGKLDPAPDLTLNDAVTIPGVDIKQVP 182 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++KGD++ I AASI+AKVTRD M D ++P YGFA +KGY +A H++ L + G + Sbjct: 183 IIKGDAKSISIGAASIVAKVTRDRMMVEYDNIYPGYGFASNKGYGSAEHIKALKKIGPSP 242 Query: 182 HHRRSF 187 HR SF Sbjct: 243 IHRASF 248 >UniRef50_A0NVD9 Ribonuclease n=2 Tax=Rhodobacteraceae RepID=A0NVD9_9RHOB Length = 228 Score = 248 bits (635), Expect = 6e-65, Method: Composition-based stats. Identities = 99/181 (54%), Positives = 115/181 (63%), Gaps = 2/181 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + GVDE GRGP G VVTAAVILD R GLNDSKKL+E RR L+E+I A SL Sbjct: 44 LCGVDEAGRGPWAGPVVTAAVILDYDRLPDGLNDSKKLTEARREELFEQIVASA-HVSLA 102 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGDSRVP 130 A P ID +NI AT+ AM RAV L + P+YVL+DG P L A++KGD R Sbjct: 103 SASPATIDAVNIRTATLSAMVRAVNHLPLVPDYVLVDGRDVPLGLKQAGQALIKGDGRCL 162 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ++AASI+AKVTRD M LD FP YGFAQHKGY H + L HG T HHR SF PV Sbjct: 163 CVAAASIVAKVTRDRMMVHLDARFPDYGFAQHKGYGVPQHQQALERHGPTVHHRMSFKPV 222 Query: 191 K 191 + Sbjct: 223 R 223 >UniRef50_Q1GD84 Ribonuclease HII n=22 Tax=Alphaproteobacteria RepID=RNH2_SILST Length = 229 Score = 248 bits (635), Expect = 6e-65, Method: Composition-based stats. Identities = 101/190 (53%), Positives = 123/190 (64%), Gaps = 2/190 (1%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 +AGVDEVGRGPL G V AAV+LD A GLNDSKKL+ +RR AL EI +A Sbjct: 38 ARGYTRIAGVDEVGRGPLAGPVTAAAVVLDLADLPEGLNDSKKLTPRRRAALEPEIMARA 97 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVK 124 S+++ A EID NIL A+ LAM+RAVA L P+Y+LIDGN P+ L +PA AVVK Sbjct: 98 -SYAVAHASVEEIDHHNILRASHLAMERAVAALDPQPDYLLIDGNLIPRALHIPAEAVVK 156 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD R I+AASILAK RD M L FP YG+ ++ GYP+ H + L + G T HHR Sbjct: 157 GDGRSLSIAAASILAKEARDRIMVDLAQQFPGYGWERNAGYPSKQHRDALIKIGVTPHHR 216 Query: 185 RSFGPVKRAL 194 RSF PV + L Sbjct: 217 RSFKPVHKIL 226 >UniRef50_D1C7S7 Ribonuclease n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7S7_SPHTD Length = 233 Score = 248 bits (634), Expect = 8e-65, Method: Composition-based stats. Identities = 99/196 (50%), Positives = 121/196 (61%), Gaps = 3/196 (1%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA-RPIAGLNDSKKLSEKRRLALYEEI 61 E +LVAGVDEVGRG + G VV AA IL P I G+ DSK LS ++R L EEI Sbjct: 32 ELWARGLRLVAGVDEVGRGCVAGPVVAAACILPPGIEDIPGVRDSKTLSARQRERLAEEI 91 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPA-M 120 + AL LG A EID+ NI A+ LAM+RA+A L A ++VL DG P+L M Sbjct: 92 RRVALGIGLGAASRREIDQYNIRQASALAMRRALARLG-AWDFVLYDGRPLPELDPERTM 150 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 AVVKGD+ I+ ASILAKVTRDA MA L P+YG+ ++ GY TA HL+ L G T Sbjct: 151 AVVKGDASCLSIACASILAKVTRDALMARLARRHPEYGWERNAGYGTAEHLDALLRVGPT 210 Query: 181 EHHRRSFGPVKRALGL 196 HHRR+F PV+ L Sbjct: 211 PHHRRTFAPVRDLLAA 226 >UniRef50_Q0AWX1 Ribonuclease HII n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RNH2_SYNWW Length = 255 Score = 248 bits (633), Expect = 9e-65, Method: Composition-based stats. Identities = 88/193 (45%), Positives = 118/193 (61%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 E + +AG+DE GRGP+ G V+ AAVIL G+NDSKKL+ +R L EI Sbjct: 50 YEAYNNGFRYIAGIDEAGRGPIAGPVMAAAVILSRDFFCPGINDSKKLTALKRSKLAAEI 109 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 K++A+SWS+ P +D++NIL+AT AM AV L PE++LID + P + + Sbjct: 110 KKQAISWSVAAVFPSYLDKVNILNATREAMLLAVKNLSPRPEFLLIDAVQLPDIDIKQYP 169 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++KGDS I+AASILAKV RD M A D ++P YGF++HKGY T HL+ L G Sbjct: 170 LIKGDSLSVSIAAASILAKVERDRVMEAFDSLYPGYGFSRHKGYATREHLQSLLRLGTCA 229 Query: 182 HHRRSFGPVKRAL 194 HR SF PVK + Sbjct: 230 LHRVSFEPVKSMV 242 >UniRef50_Q2B7D6 Ribonuclease n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B7D6_9BACI Length = 255 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 86/190 (45%), Positives = 114/190 (60%), Gaps = 1/190 (0%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 ++AG DE GRGPL G V+ AAVIL + GL+DSKKLSE +R Y+EI Sbjct: 66 LKKSGWTMIAGTDEAGRGPLAGPVIAAAVILPEGFYLPGLDDSKKLSEAKRDEFYKEIMS 125 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 A + +GR EID +NIL A+ AM A+A + P+Y+L D +P A AV+ Sbjct: 126 GASAVGIGRISAGEIDRINILQASKKAMLLALADMGSTPDYLLTDAVDL-DVPYQAEAVI 184 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGDS+ I+AAS++AKVTRD M LD +P YGF ++ GY T HLE + +HG H Sbjct: 185 KGDSKSVTIAAASVIAKVTRDRYMRELDEQYPHYGFGRNMGYGTRQHLEAIEKHGIINEH 244 Query: 184 RRSFGPVKRA 193 R+SF P+K Sbjct: 245 RKSFAPIKGM 254 >UniRef50_Q1JGT2 Ribonuclease HII n=78 Tax=Firmicutes RepID=RNH2_STRPD Length = 263 Score = 246 bits (628), Expect = 4e-64, Method: Composition-based stats. Identities = 88/193 (45%), Positives = 117/193 (60%), Gaps = 4/193 (2%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 Q +AG+DEVGRGPL G VV A VIL I GLNDSKK+ + + +Y+ +KE Sbjct: 65 LYKEGYQAIAGIDEVGRGPLAGPVVAACVILPQHCKIKGLNDSKKIPKSKHETIYQAVKE 124 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH---IAPEYVLIDGNRCPKLPMPAM 120 KAL+ +G + IDE+NI AT LAM A+ L P+Y+LID + + Sbjct: 125 KALAIGIGIIDNQLIDEVNIYEATKLAMLEAIKQLEGQLTQPDYLLIDAMTL-DIAISQQ 183 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 +++KGD+ I+AASI+AKVTRD MA D +FP YGFA++ GY T HL+ L +G T Sbjct: 184 SILKGDANSLSIAAASIVAKVTRDQMMANYDRIFPGYGFAKNAGYGTKEHLQGLKAYGIT 243 Query: 181 EHHRRSFGPVKRA 193 HR+SF PVK Sbjct: 244 PIHRKSFEPVKSM 256 >UniRef50_B9XLY3 Ribonuclease n=1 Tax=bacterium Ellin514 RepID=B9XLY3_9BACT Length = 245 Score = 246 bits (628), Expect = 4e-64, Method: Composition-based stats. Identities = 80/201 (39%), Positives = 108/201 (53%), Gaps = 8/201 (3%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA-------RPIAGLNDSKKLSEKRRL 55 E T LVAGVDE G GPL G VV AAV+ + + GLNDSK+L E +R Sbjct: 16 ELWQQGTTLVAGVDEAGCGPLAGPVVAAAVLFPCSWLEAGLFSKLRGLNDSKQLDEDQRE 75 Query: 56 ALYEEIKEKA-LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK 114 Y I + ++ + ID +NI A M +A+ L+ P++VL+DG + Sbjct: 76 KFYNIIVNHPEIRHAIAVIDVEMIDRINIRQAAWRGMNQALDQLNPKPQHVLVDGLKIKW 135 Query: 115 LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKL 174 LP A+V+GD + I+AAS+LAKVTRD M D +P YGFA+HKGY T HL + Sbjct: 136 LPYAQTALVQGDGKSYSIAAASVLAKVTRDRLMQDYDKQYPGYGFAEHKGYGTPKHLAAI 195 Query: 175 AEHGATEHHRRSFGPVKRALG 195 G HR+SF P + + Sbjct: 196 NAQGPCLIHRKSFAPFRPIME 216 >UniRef50_B9M597 Ribonuclease HII n=3 Tax=Deltaproteobacteria RepID=RNH2_GEOSF Length = 216 Score = 245 bits (626), Expect = 6e-64, Method: Composition-based stats. Identities = 85/188 (45%), Positives = 115/188 (61%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 +AGVDE GRGPL G VV AAVIL ++ ++DSKKL+ +R L+E I AL Sbjct: 24 QGYASLAGVDEAGRGPLAGPVVAAAVILPAGIGLSEVDDSKKLTSGKRDELFEVIMANAL 83 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 + +G ++ ID +NIL AT+ AM+ A++ L I P+YVL+DG + +P + KGD Sbjct: 84 AVGVGLSDAGVIDRINILQATLAAMKEALSLLFIKPDYVLVDGISKIPVTIPQKTIKKGD 143 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 I+AASI+AKV RD M + D FPQYGFA HKGY HL+ +AE+G HR + Sbjct: 144 GTSLSIAAASIVAKVHRDRLMVSYDAEFPQYGFAAHKGYGCVDHLKAIAEYGPCPIHRMT 203 Query: 187 FGPVKRAL 194 F VK + Sbjct: 204 FSGVKEHV 211 >UniRef50_A8SF05 Ribonuclease n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF05_9FIRM Length = 215 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 100/184 (54%), Positives = 122/184 (66%), Gaps = 1/184 (0%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 V AGVDE GRGPL G V AA ILDP P+ G+NDSKKL+EK+R AL++EI EK Sbjct: 20 VRSQYGCFAGVDEAGRGPLCGPVCVAACILDPENPVYGINDSKKLTEKKREALFDEICEK 79 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVV 123 AL++ + P ID NIL+ATM MQ+AV L I P VL+DGNR P L +PA VV Sbjct: 80 ALAYRIIFVGPEVIDRENILNATMGGMQQAVEELDIVPNLVLVDGNRTPAGLQIPAQPVV 139 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGD+ I AAS+LAKV+RD M LD +PQY A+HKGYPT H E +A++G + Sbjct: 140 KGDATSASIGAASVLAKVSRDRYMLELDKQYPQYQLAKHKGYPTKLHYELIAQYGIQPFY 199 Query: 184 RRSF 187 RRSF Sbjct: 200 RRSF 203 >UniRef50_C6QIW2 Ribonuclease n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QIW2_9RHIZ Length = 231 Score = 244 bits (623), Expect = 1e-63, Method: Composition-based stats. Identities = 93/189 (49%), Positives = 121/189 (64%), Gaps = 1/189 (0%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 ++ +AGVDE GRGP G VV AAVILDP + A ++DSK L E R LY I + A+ Sbjct: 22 GSRPIAGVDEAGRGPWAGPVVAAAVILDPDKIPANIDDSKTLDEDSRAFLYRRIMKVAI- 80 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 +G A+ ID NIL AT+ AM AV+ L P+ VL+DG++ P++PM A+VKGDS Sbjct: 81 VGVGIADVDRIDRENILGATLWAMAEAVSQLGETPKLVLVDGDKTPRIPMSVRAIVKGDS 140 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + I+AASI+AKVTRD M +P YGF +HKGY T H +A+ G + HRRSF Sbjct: 141 KCLSIAAASIVAKVTRDRLMMDFARAYPGYGFERHKGYGTPEHQAAIAKLGVSALHRRSF 200 Query: 188 GPVKRALGL 196 PV+ ALGL Sbjct: 201 RPVQLALGL 209 >UniRef50_A5FIL7 Ribonuclease HII n=4 Tax=Flavobacteriales RepID=RNH2_FLAJ1 Length = 221 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 87/217 (40%), Positives = 117/217 (53%), Gaps = 21/217 (9%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 M++ Y L G DE GRG L G V AAVIL LNDSK+LSEK R L Sbjct: 1 MLQLNYSGFTLETGTDEAGRGCLAGPVTAAAVILPSVFENNILNDSKQLSEKARALLKPI 60 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP---- 116 I+E+AL +S+ P EIDE+NIL+A+M MQ + L PEY+++DGNR Sbjct: 61 IEEQALCFSVTHLFPDEIDEINILNASMKGMQECILKLKHIPEYIIVDGNRSLNAKLGLK 120 Query: 117 -----------------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGF 159 +P +++KGD++ I+AASILAK RD M + FP Y + Sbjct: 121 NTFGKQFSKEEIELLKSIPNQSIIKGDAKFLSIAAASILAKTYRDEYMDQIHEEFPMYNW 180 Query: 160 AQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGL 196 Q+KGYPT H E + ++G T++HR SF + L L Sbjct: 181 KQNKGYPTKEHREAIKKYGTTKYHRMSFRLLPDQLEL 217 >UniRef50_Q3AC76 Ribonuclease HII n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RNH2_CARHZ Length = 231 Score = 243 bits (620), Expect = 3e-63, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 106/196 (54%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + +LVAG DE GRGP+ G VV A V++ P I ++DSKKLS K+R L+EEI Sbjct: 31 QLFSSGYELVAGGDEAGRGPVAGPVVAAIVVIKPGIYIPEVDDSKKLSSKKREKLFEEII 90 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 WS+ P ID LNI AT A + A+ L I PE +++D + +++ Sbjct: 91 NLVTDWSVAVVGPDLIDRLNIYQATKFAFKAALDSLSIKPEALILDALKLTGFSGKQVSM 150 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VK D ++ ASILAKV RD M D FP YGF ++KGY T H E L G + Sbjct: 151 VKADEISFAVACASILAKVIRDKIMEQYDKDFPGYGFKKNKGYLTREHREALELLGPSPI 210 Query: 183 HRRSFGPVKRALGLAS 198 HR+SF P+K G Sbjct: 211 HRKSFEPIKSFYGQLK 226 >UniRef50_A5UX01 Ribonuclease HII n=8 Tax=Chloroflexi RepID=RNH2_ROSS1 Length = 227 Score = 243 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 90/197 (45%), Positives = 115/197 (58%), Gaps = 5/197 (2%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA-----RPIAGLNDSKKLSEKRRLALY 58 + +AG+DE GRG L G VV AAVIL A + G+ DSK LS +R L+ Sbjct: 14 LRAAGYRAIAGLDEAGRGCLAGPVVAAAVILPDAVIDTPDVLDGVADSKMLSPAQRADLF 73 Query: 59 EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP 118 E I A++W++G H ID IL AT LAMQ A+ L + +LID P+P Sbjct: 74 ERITSLAVAWAVGATPAHIIDSHGILPATRLAMQVALLRLPRPADALLIDAVTLDNWPLP 133 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 A++KGD+R I+AASI+AKVTRD M ALD +PQYGFA HKGY T H + L +G Sbjct: 134 QRALIKGDARCLSIAAASIIAKVTRDRLMDALDACWPQYGFASHKGYGTVQHQQALRRYG 193 Query: 179 ATEHHRRSFGPVKRALG 195 T HHRR+F P+ L Sbjct: 194 PTPHHRRTFRPLCDWLA 210 >UniRef50_A7HQZ3 Ribonuclease HII n=43 Tax=Bacteria RepID=RNH2_PARL1 Length = 269 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 103/187 (55%), Positives = 119/187 (63%), Gaps = 2/187 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +LV GVDE GRGPL G VV AAVI+D R GLNDSKKL RR L E+ + A Sbjct: 61 RLVCGVDEAGRGPLAGPVVAAAVIIDLTRCPEGLNDSKKLDAARRADLLAELADCA-EIG 119 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSR 128 +G A EIDE+NILHATMLAM RAVA L AP LIDGNRCP L + AV+ GD+ Sbjct: 120 VGIASVEEIDEINILHATMLAMTRAVASLPRAPHIALIDGNRCPPSLACASRAVIGGDAL 179 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+AASI+AKVTRD MAAL P YGF +H GY T H + L+ G HRRSF Sbjct: 180 ARSIAAASIVAKVTRDRMMAALAETHPGYGFEKHMGYSTPEHFDALSRLGPCAIHRRSFA 239 Query: 189 PVKRALG 195 PV++ L Sbjct: 240 PVRKMLS 246 >UniRef50_Q2JW45 Ribonuclease HII n=5 Tax=Cyanobacteria RepID=RNH2_SYNJA Length = 221 Score = 241 bits (617), Expect = 7e-63, Method: Composition-based stats. Identities = 82/193 (42%), Positives = 108/193 (55%), Gaps = 4/193 (2%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPI---AGLNDSKKLSEKRRLALYEE 60 + VAGVDEVGRG L G VV AAVIL +G+ D K+L +R E Sbjct: 23 LWQQGMRRVAGVDEVGRGALAGPVVAAAVILPAHLDPEALSGVRDCKQLRPPQRAHWAER 82 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 I + AL+ +G A EID+LNI AT+LAMQRA+A + E++L+DG +L Sbjct: 83 IAQVALAVGIGSASAAEIDQLNIRQATLLAMQRALAQVG-EVEHILLDGLPLAELGSRQT 141 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 A+VKGD I+AASI+AKV RD M + D +P YG+ + GY T H L G + Sbjct: 142 ALVKGDQLSLSIAAASIVAKVWRDTLMQSWDHQYPGYGWRTNVGYGTQEHRLALQRLGPS 201 Query: 181 EHHRRSFGPVKRA 193 HRRSF P++ Sbjct: 202 PQHRRSFAPLRDL 214 >UniRef50_Q024M2 Ribonuclease HII n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RNH2_SOLUE Length = 228 Score = 241 bits (617), Expect = 8e-63, Method: Composition-based stats. Identities = 90/189 (47%), Positives = 118/189 (62%), Gaps = 1/189 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E + VAGVDEVGRG L GAV AVIL RPI GLNDSK+L +RR L I+ Sbjct: 19 ELRARGFRAVAGVDEVGRGALFGAVFAGAVILSEERPIRGLNDSKQLDPERREVLAGRIR 78 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E+A++WS+ + ID +NI A+ +AM+ AV+ L AP+++L+D + +P A+ Sbjct: 79 ERAVAWSIAAVDASTIDSINIYQASRMAMRIAVSRLSPAPDFLLVDAVPL-EFAVPQRAL 137 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD R I+AASILAKV RD M D VFP+YG A HKGY T H + ++G T Sbjct: 138 IKGDERCHAIAAASILAKVARDECMRVWDKVFPEYGLASHKGYSTPEHYRAIEQYGPTPL 197 Query: 183 HRRSFGPVK 191 HR SF PV+ Sbjct: 198 HRLSFEPVR 206 >UniRef50_B8FRK8 Ribonuclease HII n=5 Tax=Bacteria RepID=RNH2_DESHD Length = 260 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 96/194 (49%), Positives = 129/194 (66%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + +AG+DE GRGPL G VV A IL + GLNDSKKL+E +R L+++IK Sbjct: 66 QLWLNGYLHIAGIDEAGRGPLAGPVVAATCILPAKFNLPGLNDSKKLTESKREKLFQQIK 125 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E+A+ +++G AEP EID LNIL AT LAM+RAV GL + P ++LID P L +P + Sbjct: 126 EQAIGYAVGSAEPAEIDGLNILQATKLAMKRAVEGLKVRPHFLLIDALELPSLKIPQKGI 185 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 + GD+ I+AASILAKV+RD M LD ++P+YGFA++KGY T HL L HG + Sbjct: 186 IDGDALSASIAAASILAKVSRDHLMGELDKLYPEYGFAKNKGYGTREHLMALRRHGVSPI 245 Query: 183 HRRSFGPVKRALGL 196 HRRSF PV++ L + Sbjct: 246 HRRSFAPVQQQLDI 259 >UniRef50_Q49X31 Ribonuclease HII n=55 Tax=Staphylococcus RepID=RNH2_STAS1 Length = 256 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 79/185 (42%), Positives = 114/185 (61%), Gaps = 1/185 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L+ G+DEVGRGPL G VVT AVIL+ GLNDSKKLS K+R ++ ++ +++ Sbjct: 73 LICGIDEVGRGPLAGPVVTCAVILNKNHHFTGLNDSKKLSAKQRHSIESKLLNDVYAYAY 132 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A EIDE+NI AT LAM RA+ GL I P ++L+D + +P +++KGD++ Sbjct: 133 GYASVEEIDEINIYEATKLAMHRAIEGLRIKPTHLLVDAMTL-DIDIPQTSLIKGDAKSV 191 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AAS+LAK RD M L +P Y F + GY T HL+ + ++G HR++F P+ Sbjct: 192 SIAAASVLAKEHRDQYMRDLGRKYPGYSFENNVGYGTQQHLDGIKKYGILNEHRKTFEPI 251 Query: 191 KRALG 195 K + Sbjct: 252 KSLVN 256 >UniRef50_A5D1I3 Ribonuclease HII n=4 Tax=Bacteria RepID=RNH2_PELTS Length = 266 Score = 241 bits (615), Expect = 1e-62, Method: Composition-based stats. Identities = 91/192 (47%), Positives = 114/192 (59%), Gaps = 2/192 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP--ARPIAGLNDSKKLSEKRRLALYEEI 61 + VAGVDE GRGPL G VV AAVIL P +AGLNDSKKL+ +R L I Sbjct: 67 LIAQGYSPVAGVDEAGRGPLAGPVVAAAVILPPVADLALAGLNDSKKLNPSKRAELAARI 126 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 K+ AL+WS G + EI NI A++ AM+RAV L I P Y+L+DG R +L +P +A Sbjct: 127 KKVALAWSAGISTVEEIFNENIHAASLTAMRRAVLKLKIRPAYLLVDGYRISRLELPQLA 186 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 + GD ++AASILAKV RD M + +PQYGF +HKGY T HL L +G Sbjct: 187 LTGGDGLSASVAAASILAKVLRDRLMDFYHVQYPQYGFNRHKGYATPEHLAALERYGPCP 246 Query: 182 HHRRSFGPVKRA 193 HR + PVK Sbjct: 247 LHRAGYRPVKNC 258 >UniRef50_Q73G60 Ribonuclease HII n=9 Tax=Rickettsiales RepID=RNH2_WOLPM Length = 198 Score = 241 bits (615), Expect = 1e-62, Method: Composition-based stats. Identities = 87/194 (44%), Positives = 123/194 (63%), Gaps = 2/194 (1%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVIL-DPARPIAGLNDSKKLSEKRRLALYEE 60 + ++AGVDEVGRGPL G V++AAV+ D I G+NDSKKL+ + R LYE+ Sbjct: 6 FTLENKLSGVIAGVDEVGRGPLAGPVISAAVVFIDRNTIIDGINDSKKLTPQCRQVLYEK 65 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 I A + +G A EI+ NIL AT L+M+RA+ L + +YVL+DGN+ P++ Sbjct: 66 ITSVA-KFGIGMASVEEINSYNILQATKLSMKRALIDLDLELDYVLVDGNQPPEVKWQVK 124 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 ++V GD+ I+AASI+AKVTRD M L P+Y + ++KGY T HL + +G T Sbjct: 125 SIVNGDNLSTSIAAASIVAKVTRDRLMQELHNKHPEYNWYKNKGYGTKEHLNAIGLYGIT 184 Query: 181 EHHRRSFGPVKRAL 194 EHHR++F P+ RAL Sbjct: 185 EHHRKNFAPISRAL 198 >UniRef50_D0NJ61 Ribonuclease n=1 Tax=Phytophthora infestans T30-4 RepID=D0NJ61_PHYIN Length = 249 Score = 240 bits (613), Expect = 2e-62, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 124/195 (63%), Gaps = 7/195 (3%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + V GVDE GRGPL G VV AA + IAG++DSKK+ E +R AL+E + Sbjct: 39 YEAKGYTTVIGVDEAGRGPLAGPVVAAACHVPLDVTIAGIDDSKKILEPQREALFELLTS 98 Query: 64 K-ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE-----YVLIDGNRCPK-LP 116 +++++ P ID++NIL A++ +M ++V + + +VL+DGN+ P L Sbjct: 99 HPNITYAVHVNSPQRIDDINILQASLESMTKSVNEVAQQLQQKDKTFVLVDGNKLPPTLE 158 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 +PA AVVKGDS+V I+AASI+AKVTRD M D+ FPQYG AQHKGYPT H+ +A+ Sbjct: 159 LPAEAVVKGDSKVYSIAAASIIAKVTRDRLMREYDVKFPQYGLAQHKGYPTRDHVAAIAK 218 Query: 177 HGATEHHRRSFGPVK 191 HG E HR +F P+K Sbjct: 219 HGPCEIHRMTFAPLK 233 >UniRef50_B9EBC6 Ribonuclease HII n=3 Tax=Staphylococcaceae RepID=RNH2_MACCJ Length = 264 Score = 240 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 80/195 (41%), Positives = 124/195 (63%), Gaps = 3/195 (1%) Query: 1 MIEFVYP-HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYE 59 M+E+ + ++V G+DEVGRGPL G V+ AVIL+ GLNDSK+LS+ +R +LY+ Sbjct: 59 MLEYERRYNGKVVCGIDEVGRGPLAGPVIACAVILNDGHHYIGLNDSKQLSKHKRASLYD 118 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPA 119 + + ++++++G A EID+ NI AT LAM RA+ L + P+ +LID + Sbjct: 119 ALTQ-SVTYAIGAASVEEIDKFNIYEATKLAMHRAIDKLPVKPDVLLIDAMNL-NTGLIE 176 Query: 120 MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA 179 +++KGD++ I+AAS++AKV RD M + FP Y F ++ GY T HL+ L ++G Sbjct: 177 ESIIKGDAKSVSIAAASVIAKVYRDHLMEEIHEEFPYYDFNRNAGYGTKRHLDGLMQYGI 236 Query: 180 TEHHRRSFGPVKRAL 194 T HHR+SF P+K + Sbjct: 237 TAHHRKSFEPIKSMI 251 >UniRef50_C8WWC4 Ribonuclease n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWC4_ALIAD Length = 216 Score = 240 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 88/198 (44%), Positives = 118/198 (59%), Gaps = 4/198 (2%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP----IAGLNDSKKLSEKRRLAL 57 ++ AGVDEVGRG + G VV A+V+L R + + DSK+L R L Sbjct: 10 LDLALSGGCRTAGVDEVGRGCIAGPVVAASVVLPLERETYEELKDVMDSKQLKPDVRERL 69 Query: 58 YEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM 117 + I+ KAL+ +G A P EID LNIL AT LAM+R++ L I + L+DGNR + + Sbjct: 70 ADRIRAKALAVGIGMASPEEIDRLNILQATQLAMKRSLDALDIPVDLALVDGNRGFRHRV 129 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 P + VV GD+R ++AAS++AKV RD MA LD FP YGF++H GY T HLE L Sbjct: 130 PVLPVVDGDARSLLVAAASVIAKVFRDRLMAKLDEGFPGYGFSEHVGYGTRAHLEALRRL 189 Query: 178 GATEHHRRSFGPVKRALG 195 G + HR SF PV+ +G Sbjct: 190 GPSVVHRLSFAPVRACVG 207 >UniRef50_Q5NNT2 Ribonuclease HII n=5 Tax=Alphaproteobacteria RepID=RNH2_ZYMMO Length = 215 Score = 239 bits (610), Expect = 4e-62, Method: Composition-based stats. Identities = 81/187 (43%), Positives = 113/187 (60%), Gaps = 5/187 (2%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 +V GVDEVGRGPL G V+ AV L G+NDSKKL+ +RR L + + +A ++ Sbjct: 25 VVFGVDEVGRGPLAGPVMAGAVYLHREHIPEGINDSKKLTARRRHLLSDMLHNQA-DYAT 83 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGL----HIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 G A+ HEID +NI A++LAM+RAV L P+ +L+DG P P P++ ++KGD Sbjct: 84 GMADVHEIDRINIRQASLLAMKRAVEALIQKIGREPDCILVDGRDIPDWPWPSLPIIKGD 143 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S I+AASI+AKV RD M +P YG+ + GYPT H E + T+ HRRS Sbjct: 144 SLSLSIAAASIVAKVERDEIMVKASQEYPGYGWEHNMGYPTKEHREAIQRLKPTKFHRRS 203 Query: 187 FGPVKRA 193 F P+++ Sbjct: 204 FSPIRQF 210 >UniRef50_B9DPH3 Ribonuclease HII n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=RNH2_STACT Length = 261 Score = 238 bits (608), Expect = 9e-62, Method: Composition-based stats. Identities = 81/184 (44%), Positives = 111/184 (60%), Gaps = 1/184 (0%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 ++ G+DEVGRGPL G VV AVIL+ GL+DSKK+S R L E + EK +++ Sbjct: 73 VICGIDEVGRGPLAGPVVACAVILNADHAYYGLDDSKKVSAANRQKLSEALIEKTTAYAY 132 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G A P EID+LNI AT +AM RA+ L++ P ++LID P L + +++KGD++ Sbjct: 133 GIATPEEIDDLNIYQATQVAMMRAIENLNVTPTHLLIDAMELP-LDIAQTSIIKGDAKSV 191 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASILAK RD M L +P Y F + GY T HLE + G HR+SF P+ Sbjct: 192 SIAAASILAKEHRDTYMRQLAEQYPGYDFEHNVGYGTKAHLEGIKRLGIIPEHRKSFEPI 251 Query: 191 KRAL 194 K + Sbjct: 252 KSIV 255 >UniRef50_A8VRY1 Ribonuclease n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRY1_9BACI Length = 258 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 90/191 (47%), Positives = 118/191 (61%), Gaps = 3/191 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 +L+AGVDEVGRGPL G V A VIL + + GL DSKKLSE +R EI++ Sbjct: 63 LRLSGYRLIAGVDEVGRGPLAGPVTAACVILPESPDLKGLTDSKKLSEAKRHFYAAEIQK 122 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIA--PEYVLIDGNRCPKLPMPAMA 121 A++ G A P EID LNI A+ LAM+RAVA + +++LID P + +P + Sbjct: 123 VAIAAETGEASPEEIDRLNIYEASKLAMRRAVAAVQQKTAIDFLLIDAMTLP-IDLPQES 181 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++KGD+R I+AAS++AKV RD +M LD FP+YG A H GY T HL L EHG Sbjct: 182 LIKGDARSLSIAAASVIAKVERDNQMKELDRAFPEYGLASHMGYGTREHLAALDEHGPQF 241 Query: 182 HHRRSFGPVKR 192 HR+SF PV+ Sbjct: 242 FHRKSFSPVRE 252 >UniRef50_Q2P4B9 Ribonuclease HII n=19 Tax=cellular organisms RepID=RNH2_XANOM Length = 246 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 99/187 (52%), Positives = 120/187 (64%), Gaps = 2/187 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPAR-PIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 LVAGVDE GRGPL G V AAV+ DP + I GL+DSK+L+ +RR LY I ++AL+WS Sbjct: 36 LVAGVDEAGRGPLAGPVAVAAVVFDPNKPRINGLDDSKQLTAERREQLYARIVDRALAWS 95 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAVVKGDSR 128 + + EID +NI ATML M+RAV G+ + IDGNR PK LP PA A++ GD+ Sbjct: 96 VVLIDSEEIDRINIYQATMLGMRRAVEGVAHVAGFARIDGNRVPKGLPCPAEALIGGDAL 155 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I AASI+AKVTRD M L P+Y F QHKGY T HL L HG HRRSF Sbjct: 156 DRAIMAASIVAKVTRDRLMHELHAQHPEYRFDQHKGYSTPMHLAALQTHGPCPQHRRSFA 215 Query: 189 PVKRALG 195 PV+ AL Sbjct: 216 PVRLALE 222 >UniRef50_B8CW25 Ribonuclease n=1 Tax=Halothermothrix orenii H 168 RepID=B8CW25_HALOH Length = 308 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 86/191 (45%), Positives = 122/191 (63%), Gaps = 1/191 (0%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 +AGVDE GRGPL G VV AAV+ P + GL+DSKKL+ K R L+EEI + Sbjct: 67 LFKEGFHFIAGVDEAGRGPLAGPVVAAAVVFKPETKVLGLDDSKKLTAKERETLFEEIYD 126 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDG-NRCPKLPMPAMAV 122 +ALS +G + +ID+LNIL+A++ AM++A+ L +Y+LIDG N+ +L + AV Sbjct: 127 RALSIGVGIVDNKDIDKLNILNASLKAMKKALDSLSCPVDYILIDGKNKLSELNIKQQAV 186 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 + GD++V I+AASI+AKVTRD + L +P+YGF +KGY T H+E L +G + Sbjct: 187 IDGDNKVNVIAAASIIAKVTRDRILDKLHKKYPEYGFINNKGYGTREHIEALKAYGPSPI 246 Query: 183 HRRSFGPVKRA 193 HR SF V+ Sbjct: 247 HRYSFSLVREY 257 >UniRef50_B1VG82 Ribonuclease n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VG82_CORU7 Length = 241 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 82/192 (42%), Positives = 107/192 (55%), Gaps = 2/192 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYEEI 61 + VAGVDE GRG G + A+ IL +AGLNDSKKL+ KRR L+ I Sbjct: 33 LRFHGFSHVAGVDEAGRGACCGPITIASCILPDHGVPELAGLNDSKKLTPKRRERLFGAI 92 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 E A+++ + EID+ I +A + M R VAGL + P+ VL D P+L Sbjct: 93 TEHAVAYEIVHIPAAEIDQRGIQYANINGMYRVVAGLGVEPDVVLTDAVHLPELACEHAP 152 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +VKGD+ P ISAASILAKV+RD M + +P YG A HKGY TA H+ + HGA Sbjct: 153 LVKGDALSPAISAASILAKVSRDRLMVEMAEKYPGYGLAGHKGYGTAKHMAAVRLHGACP 212 Query: 182 HHRRSFGPVKRA 193 HR ++ V A Sbjct: 213 EHRYTYSNVATA 224 >UniRef50_Q0AEI5 Ribonuclease HII n=2 Tax=Nitrosomonas RepID=RNH2_NITEC Length = 219 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 99/191 (51%), Positives = 125/191 (65%), Gaps = 1/191 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E+++P + + GVDE GRGPL G V A V+LD I GL DSK+LSEKRR +L E+IK Sbjct: 25 EWIHPEGKAIYGVDEAGRGPLAGPVYAACVVLDSCYVINGLADSKQLSEKRRASLAEQIK 84 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE-YVLIDGNRCPKLPMPAMA 121 + A +W++ A EID LNIL A+MLAM+RAV L +L+DG P+L A Sbjct: 85 QHARAWAIASASVEEIDRLNILQASMLAMRRAVIELMPVSNALILVDGTHVPQLDYEVQA 144 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 V++GDS V EISAASILAK RDAEM L ++P YGF +HKGYPT HL+ + HG T Sbjct: 145 VIRGDSLVAEISAASILAKTARDAEMLRLHEIYPIYGFDRHKGYPTRVHLDAIRLHGITA 204 Query: 182 HHRRSFGPVKR 192 HR+SF P Sbjct: 205 THRKSFAPCAE 215 >UniRef50_C4XFT1 Ribonuclease n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XFT1_MYCFE Length = 217 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 107/190 (56%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 YP T+L+ G+DE GRG G +V VI+ + DSK+LS+K+R E I E A Sbjct: 28 YPDTKLIVGLDEAGRGCCAGPLVVGCVIMPQNFNHPLIKDSKQLSQKQREEALEIILENA 87 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 + E+D+LN A+ + MQR + L+ PE V+ D + + +P + +VKG Sbjct: 88 IETVTTIINAQEVDQLNPKQASRIGMQRCINKLNTKPELVITDFEKINDINIPQINLVKG 147 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D ++AASILAKVTRD M +D FP Y F ++KGY T H ++++G E HR+ Sbjct: 148 DQLSINVAAASILAKVTRDLIMVGIDKKFPMYNFKKNKGYCTKEHEAAMSQYGICEFHRK 207 Query: 186 SFGPVKRALG 195 S+ VK+ L Sbjct: 208 SYKNVKKYLN 217 >UniRef50_Q3A2F0 Ribonuclease HII n=3 Tax=Deltaproteobacteria RepID=RNH2_PELCD Length = 209 Score = 236 bits (603), Expect = 3e-61, Method: Composition-based stats. Identities = 88/191 (46%), Positives = 118/191 (61%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + +AG+DE GRGPL G VV AAV+L P + GLNDSKK+S K R L+ +I+ Sbjct: 19 LSRQGYRRIAGIDEAGRGPLAGPVVAAAVVLPPVFDLPGLNDSKKISAKLREKLFPQIRR 78 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 +AL + +G A E+D LN+L AT+LAM+RA+ L +Y+L+DG LP+P + Sbjct: 79 QALDYGIGLASAQEVDGLNVLQATLLAMRRALDRLAQPADYLLVDGITPVPLPLPQKTLK 138 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 +GDSR I+AAS+LAKV RD M D FP+YGFA HKGY +A H +A G H Sbjct: 139 QGDSRSLSIAAASVLAKVVRDRLMTTYDARFPEYGFAGHKGYGSAAHRAAIARLGPCPLH 198 Query: 184 RRSFGPVKRAL 194 R +F V+ L Sbjct: 199 RATFRGVREYL 209 >UniRef50_B2KC56 Ribonuclease n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC56_ELUMP Length = 210 Score = 236 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 108/196 (55%), Gaps = 4/196 (2%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYE 59 E + ++ + G+DE GRGPL G VV AV +NDSKKL++ +R +Y Sbjct: 9 CEILQKNSCALIGIDEAGRGPLAGPVVACAVCAPKEIYHLFEDVNDSKKLTDVKREKIYA 68 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAG-LHIAPEYVLIDGN-RCPKLPM 117 I +++ +G A EIDE+NIL AT LAM+RA L I L+DGN + + Sbjct: 69 RINGYKIAYGVGFASAKEIDEINILQATFLAMRRACQKFLDINEALALVDGNHKIKDFLL 128 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 P V+ GD++ I+ AS++AKV RD M ++P YGF HKGY + H+ + EH Sbjct: 129 PQQTVIDGDAKSFSIAMASVIAKVHRDRYMRKAHELYPVYGFDGHKGYGSGKHIAAIKEH 188 Query: 178 GATEHHRRSFGPVKRA 193 G + HR +F P+K Sbjct: 189 GPCKEHRMTFAPLKNL 204 >UniRef50_A6GPG3 Ribonuclease n=1 Tax=Limnobacter sp. MED105 RepID=A6GPG3_9BURK Length = 218 Score = 235 bits (601), Expect = 5e-61, Method: Composition-based stats. Identities = 97/201 (48%), Positives = 121/201 (60%), Gaps = 6/201 (2%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + H+ V GVDE GRGPL G VV A +L+ I GL SK LS K+R +L I+ Sbjct: 13 YAEQHSLQVIGVDEAGRGPLCGPVVAGAALLNQPNTIDGLACSKTLSAKKRDSLETAIRR 72 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVA------GLHIAPEYVLIDGNRCPKLPM 117 A + ++ A EID LNIL A++LAM RAV GL + +DGN+ PK P Sbjct: 73 NAKACAVAHATVEEIDRLNILQASLLAMWRAVDLVLDQTGLKPKQCLIAVDGNKLPKWPY 132 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 A+AVVKGD+++P ISAASILAKV RD + FPQY H GYPTA H+ L EH Sbjct: 133 QAIAVVKGDTKIPAISAASILAKVARDEWCKTHALQFPQYELDIHMGYPTARHMALLLEH 192 Query: 178 GATEHHRRSFGPVKRALGLAS 198 GAT+ HR+SF PV+ AL A Sbjct: 193 GATQLHRKSFRPVREALERAQ 213 >UniRef50_Q3Z8D7 Ribonuclease HII n=2 Tax=Dehalococcoides RepID=RNH2_DEHE1 Length = 211 Score = 235 bits (601), Expect = 6e-61, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 115/196 (58%), Gaps = 3/196 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP---IAGLNDSKKLSEKRRLALYEE 60 +AG+DE GRG L G VV AVI+ P +A + DSK L+ ++R LY Sbjct: 15 LWKQGFSSIAGLDEAGRGCLAGPVVAGAVIMPPRLKGDWVAMVRDSKVLTPEKREYLYCH 74 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 I A+S+ +G + +ID L I AT LAM++AV L P+++L+D + P +P+P Sbjct: 75 IVSMAISFGVGVVDNTQIDCLGIAPATRLAMKQAVEHLDCRPDFLLVDYLKLPDIPLPQK 134 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 +V GD+ I+ ASI+AKV+RD M L+ +P Y A+HKGY TA H+E +++ G + Sbjct: 135 GIVDGDALCFSIACASIIAKVSRDRLMCELEATYPGYHLAKHKGYGTALHMECISQKGIS 194 Query: 181 EHHRRSFGPVKRALGL 196 HRR+F P+K + Sbjct: 195 PIHRRTFAPLKSMFDV 210 >UniRef50_B5YFD2 Ribonuclease n=2 Tax=Dictyoglomus RepID=B5YFD2_DICT6 Length = 203 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 91/185 (49%), Positives = 119/185 (64%), Gaps = 2/185 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 ++ + + +AGVDE GRG L G V + AVIL P I +NDSK L+ + R L+E IK++ Sbjct: 18 LWYYFKYIAGVDEAGRGALAGPVYSGAVILPPFSSIP-VNDSKLLTPREREELFEIIKKE 76 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN-RCPKLPMPAMAVV 123 +L WS G A EI++ IL AT LAM+RAV GL I PEY+LIDGN P + +P VV Sbjct: 77 SLCWSFGYATVEEIEKFGILQATFLAMKRAVEGLEIKPEYLLIDGNIPIPDIDIPQETVV 136 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGD R I++ASI+AKV RD M LD +P+YGF +HKGY T H EK+ + G H Sbjct: 137 KGDRRCLSIASASIVAKVLRDKYMKELDKEYPEYGFGKHKGYATKEHREKIKDLGTLVIH 196 Query: 184 RRSFG 188 R+ F Sbjct: 197 RKGFK 201 >UniRef50_D1Q046 Ribonuclease n=2 Tax=Prevotella RepID=D1Q046_9BACT Length = 226 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 86/210 (40%), Positives = 116/210 (55%), Gaps = 23/210 (10%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 M++ Y + AG DE GRG L G+V AAVIL NDSK+LS+K+R AL E+ Sbjct: 1 MLQNSYNPHLIEAGCDEAGRGCLAGSVFAAAVILPKDYDNPDFNDSKQLSKKKRYALREQ 60 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP---- 116 I A++W++G P EID +NILHA+ LAM RA+ L + PE ++IDGNR Sbjct: 61 IIRDAVAWAVGIVTPAEIDRINILHASFLAMHRAIDQLAVRPEALIIDGNRFDPYKPLSE 120 Query: 117 -------------------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQY 157 +P +VKGD + I+AASILAK RD M L + +P Y Sbjct: 121 NATEGRKERVVTRPDDPAVLPWQCIVKGDGKYQNIAAASILAKTFRDDYMDELHLQYPMY 180 Query: 158 GFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 + +KGYPT H E +A +G T HR+S+ Sbjct: 181 HWNSNKGYPTRIHREAIARYGITPFHRKSY 210 >UniRef50_A4J661 Ribonuclease HII n=2 Tax=Clostridia RepID=RNH2_DESRM Length = 198 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 92/184 (50%), Positives = 122/184 (66%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L GVDE GRG + + +A ILDPA PI GL DSKKLS ++R L EEIK+ ALSW + Sbjct: 3 LECGVDETGRGSCISGIYASACILDPAHPIEGLRDSKKLSARKREILAEEIKQYALSWCI 62 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 +A E+++LN+ HAT+LAM+RA+ GL I V +DG P++ +PA A+VKGD +P Sbjct: 63 AQASLEEVEQLNVHHATLLAMKRAIEGLSIRANKVYVDGIHLPEVDIPAEAIVKGDDLIP 122 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ISAASILAKV RD M +PQYGF HKGY T H E L ++G + HR+++ P+ Sbjct: 123 AISAASILAKVARDGAMLEYHEKYPQYGFNSHKGYLTKAHREALKKYGPSPIHRKTYAPI 182 Query: 191 KRAL 194 + L Sbjct: 183 RELL 186 >UniRef50_A0LV66 Ribonuclease HII n=41 Tax=Actinomycetales RepID=RNH2_ACIC1 Length = 307 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 95/192 (49%), Positives = 114/192 (59%), Gaps = 2/192 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVIL--DPARPIAGLNDSKKLSEKRRLALYEEI 61 + VAGVDE GRG G +V AAVIL D IAGL DSK+L+ R ++Y EI Sbjct: 38 LARLGLEPVAGVDEAGRGACAGPLVVAAVILGSDRRNRIAGLADSKQLTPAARESIYNEI 97 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 +AL+WS+ E+DEL + A + M+RAVAGL + P YVL DG L P +A Sbjct: 98 ISRALAWSVVVIPSSEVDELGVHAANITGMRRAVAGLAVRPAYVLTDGFSIAGLNAPGLA 157 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 V KGD V I+AAS++AKVTRD M L FP Y FA HKGY TA H LA HG Sbjct: 158 VCKGDEAVACIAAASVVAKVTRDRLMVELHEKFPMYEFATHKGYVTAGHRAALARHGPCP 217 Query: 182 HHRRSFGPVKRA 193 HRRSF V+RA Sbjct: 218 EHRRSFVTVRRA 229 >UniRef50_C0QW88 Ribonuclease n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QW88_BRAHW Length = 226 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 115/200 (57%), Gaps = 11/200 (5%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD----------PARPIAGLNDSKKLSEK 52 E++ + + G+DEVGRG L G V AAVI+ + ++DSKK+S K Sbjct: 17 EYLSLGYKYICGIDEVGRGCLFGPVTVAAVIMPLELYNENELKKENIVEEIDDSKKISAK 76 Query: 53 RRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC 112 +R LY++I +KAL +S+ + IDE+NI +A LAM AV L+I P+ +LID + Sbjct: 77 KREELYDKIIDKALCYSIYSVDSKTIDEINIYNAVKLAMVNAVNNLNIKPDILLIDAVKL 136 Query: 113 PKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLE 172 + + ++ KGD++ I ASI+AKV RD M L + +Y +++KGY T H++ Sbjct: 137 -DINIKQCSITKGDAKSYSIGCASIVAKVYRDRMMNELPDFYQKYKVSKNKGYGTKEHMK 195 Query: 173 KLAEHGATEHHRRSFGPVKR 192 + +G ++ HR SF P+K Sbjct: 196 TIEMYGPSDMHRYSFEPIKS 215 >UniRef50_Q3B6X8 Ribonuclease HII n=5 Tax=Chlorobiaceae RepID=RNH2_PELLD Length = 208 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 81/191 (42%), Positives = 107/191 (56%), Gaps = 6/191 (3%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG-----LNDSKKLSEKRRLALY 58 ++ V G+DE GRGPL G VV AAV+ LNDSKKL+ R L Sbjct: 11 LLWNDFLRVCGIDEAGRGPLAGPVVAAAVVFPRWFSPDEGILRRLNDSKKLTPSLRRELA 70 Query: 59 EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPM 117 I+E+A W++ + ID +NIL ATMLAM RA L P+ +LIDGNR P +P+ Sbjct: 71 PAIREEAECWAVEAVDHETIDRINILRATMLAMNRAAESLPRQPDLLLIDGNRFTPNIPV 130 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 P +V GD+ V I+AAS+LAK RD M +P+YGF ++ GY T H+E + H Sbjct: 131 PYQTIVGGDALVFSIAAASVLAKTERDRMMEEYAERYPEYGFERNAGYGTREHVEAIRRH 190 Query: 178 GATEHHRRSFG 188 G + HR SF Sbjct: 191 GRSPIHRTSFR 201 >UniRef50_A5IIL8 Ribonuclease HII n=7 Tax=Thermotogaceae RepID=RNH2_THEP1 Length = 238 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 88/192 (45%), Positives = 117/192 (60%), Gaps = 4/192 (2%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E +VAGVDE GRG L G VV AAV+L+ I G+NDSK+LS +R L++EI Sbjct: 5 ELYKKEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE--IEGINDSKQLSPAKRERLFDEIM 62 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 KA + +G A P EID NI +AT LAM RA+ L + P +VL+DG +L +P + Sbjct: 63 GKA-AVGIGIASPEEIDLHNIFNATKLAMNRALENLSVGPSFVLVDGKGI-ELRVPGTCL 120 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD + I AASI+AKV RD M+ ++PQ+ F +HKGY T HL ++ ++G Sbjct: 121 VKGDQKSKLIGAASIVAKVFRDRLMSEFHKMYPQFSFHKHKGYATKEHLNEIRKNGVLPI 180 Query: 183 HRRSFGPVKRAL 194 HR SF PV L Sbjct: 181 HRMSFEPVLELL 192 >UniRef50_B0N757 Ribonuclease n=4 Tax=Bacteria RepID=B0N757_9FIRM Length = 206 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 2/190 (1%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 + G+DE GRGP+ G +V A V+ +NDSK+LS K+R LY+ I E A Sbjct: 12 QAGYDYIIGLDEAGRGPMAGELVVAGVVFPKGFYDERINDSKQLSAKKREVLYDLIIENA 71 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 L + + ++D LN+ A+ M++ + L + L D ++++KG Sbjct: 72 LYYDIEIISVADVDRLNVYQASKQGMEKCLELLKKEKMFALTDAMPIDYPD--HLSIIKG 129 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D++ I+ ASILAKVTRD M A + +P+YGF +HKGY T H E L ++G HR+ Sbjct: 130 DAKSISIAGASILAKVTRDRLMEAYALEYPEYGFEKHKGYVTKAHKEALGKYGVCPIHRK 189 Query: 186 SFGPVKRALG 195 SFGPV++ L Sbjct: 190 SFGPVQKILS 199 >UniRef50_Q4FPF7 Ribonuclease HII n=3 Tax=Bacteria RepID=RNH2_PELUB Length = 186 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 84/186 (45%), Positives = 124/186 (66%), Gaps = 2/186 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +++AGVDEVGRG L+G V AAVIL+ + L DSK L++ +R L + IK+ ++ W+ Sbjct: 2 KILAGVDEVGRGSLIGPVYAAAVILNNSIDKKLLKDSKTLTKDKREELEKYIKKNSI-WA 60 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL-PMPAMAVVKGDSR 128 +G+A EI+++NILHA++LAM+RA+ L I P VLIDGN+ P L V+KGD + Sbjct: 61 IGQASTKEIEKINILHASLLAMKRAILKLKIKPSLVLIDGNKLPDLKNYKLEYVIKGDQK 120 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +P ISAASI+AKV+RD + L F YG+ + GY T HL+ + + G T++HR++F Sbjct: 121 IPSISAASIIAKVSRDKFITKLSKEFNNYGWDTNSGYGTKEHLKAIKQFGITKYHRKTFS 180 Query: 189 PVKRAL 194 P+ L Sbjct: 181 PISDLL 186 >UniRef50_C7NAV4 Ribonuclease n=5 Tax=Fusobacteriaceae RepID=C7NAV4_LEPBD Length = 214 Score = 232 bits (592), Expect = 6e-60, Method: Composition-based stats. Identities = 87/199 (43%), Positives = 123/199 (61%), Gaps = 7/199 (3%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYE 59 ++EF + ++V GVDE GRGPL G VV AVI+ P + +NDSKKL+EK+R L+E Sbjct: 13 LMEFDEKYNKIVVGVDEAGRGPLAGPVVAGAVIVIQDFPELQEINDSKKLTEKKRERLFE 72 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP--EYVLIDGNRC-PKLP 116 I++ + +G A EIDE+NIL+AT LAM+RA+ + + VL+DGN + Sbjct: 73 AIEKNCI-VGIGIASEKEIDEMNILNATFLAMRRAINQVAEKSAFDIVLVDGNHLIREYE 131 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 +VKGDS+ I+ ASI+AKVTRD + + FP+Y F +HKGY T H E L E Sbjct: 132 GEQECIVKGDSKSLAIATASIVAKVTRDRMLCEIAKEFPEYQFEKHKGYGTKKHREILLE 191 Query: 177 HGATEHHRRSFGPVKRALG 195 GA +HR++F +K+ L Sbjct: 192 KGACRYHRKTF--LKKILD 208 >UniRef50_Q3AP34 Ribonuclease HII n=7 Tax=Chlorobiaceae RepID=RNH2_CHLCH Length = 206 Score = 232 bits (592), Expect = 6e-60, Method: Composition-based stats. Identities = 93/192 (48%), Positives = 119/192 (61%), Gaps = 6/192 (3%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP-----ARPIAGLNDSKKLSEKRRLAL 57 E ++ H + + G+DEVGRGPL G VV AAV+ + LNDSKKLS K R +L Sbjct: 7 EPLWQHYEFICGIDEVGRGPLAGPVVAAAVVFPRWFQPTEALLTLLNDSKKLSAKERESL 66 Query: 58 YEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLP 116 IK +AL W+L + + IDE+NIL ATMLAM AV L I P +L+DGNR L Sbjct: 67 VPAIKAQALHWALAEVQHNVIDEVNILQATMLAMNNAVKALPIIPSLLLVDGNRFTTDLA 126 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 +P +VKGDS V I+AAS+LAKV RDA M +P YGF +H GYPT+ H+E + + Sbjct: 127 IPYKTIVKGDSHVFSIAAASVLAKVHRDALMCVYATHYPHYGFERHAGYPTSAHIEAIRQ 186 Query: 177 HGATEHHRRSFG 188 HG HR+SF Sbjct: 187 HGRCPIHRQSFK 198 >UniRef50_C6PQZ2 Ribonuclease n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQZ2_9CLOT Length = 293 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 75/198 (37%), Positives = 111/198 (56%), Gaps = 7/198 (3%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVIL-----DPARPIAGLNDSKKLSEKRRLA 56 + + + +AGVDEVGRGPL G + +V+L D + G+ DSKKLS R Sbjct: 92 FDKDFGNYVYIAGVDEVGRGPLAGPIAAGSVVLNLRSHDFKDLLLGIKDSKKLSHDTRER 151 Query: 57 LYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP 116 L + IK K++S+++ EIDE I ++RA +GL I P+ VL DG L Sbjct: 152 LSKLIKAKSISYNISVINNAEIDERGIAWCNNEVLRRAASGLKITPDLVLSDGYAVKNLN 211 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 + V+KGD++ I+ ASI+AKV RD M ++PQYGF ++ GY T H+E + + Sbjct: 212 IENEFVIKGDAKSASIACASIIAKVYRDNLMQEYAKIYPQYGFERNSGYGTEEHIEAIKK 271 Query: 177 HGATEHHRRSFGPVKRAL 194 +G + HR+SF +K L Sbjct: 272 YGICKIHRKSF--LKNIL 287 >UniRef50_Q2S009 Ribonuclease HII n=1 Tax=Salinibacter ruber DSM 13855 RepID=RNH2_SALRD Length = 200 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 88/193 (45%), Positives = 116/193 (60%), Gaps = 4/193 (2%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + VAG+DE GRG L G VV AAVI+ P I + DSK LSE +RL I++ Sbjct: 8 LWADGYERVAGLDEAGRGCLAGPVVAAAVIMPPQVEITAIQDSKALSEGQRLDARATIED 67 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR----CPKLPMPA 119 +A++ S+ R P EID+ NIL A + AM+RA +G P++VL+DGN+ P P Sbjct: 68 EAVAASIARCSPTEIDDRNILQAALEAMRRAASGCRPPPDFVLVDGNQWDRNLVDAPWPH 127 Query: 120 MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA 179 VVKGD++ I+AASILAK RDA M L P+Y +A + GYPT H + L EHGA Sbjct: 128 ETVVKGDAKSQSIAAASILAKTERDALMRDLHEAHPEYDWASNVGYPTQQHYDALREHGA 187 Query: 180 TEHHRRSFGPVKR 192 T HHR+SF + Sbjct: 188 TPHHRQSFTLFRD 200 >UniRef50_Q31PW0 Ribonuclease HII n=2 Tax=Synechococcus elongatus RepID=RNH2_SYNE7 Length = 215 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 88/183 (48%), Positives = 108/183 (59%), Gaps = 5/183 (2%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLALYEEIKEKA 65 Q VAGVDEVGRG L G VVTAAVIL G+ DSK+LS+++R LY I E A Sbjct: 19 QTVAGVDEVGRGCLFGPVVTAAVILPETAIAPLQQAGVTDSKRLSQRQRQQLYPLICEVA 78 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVK 124 L+ G A EI+ NIL AT LAM+RA+A L LIDGN+ P+L P V++ Sbjct: 79 LATGWGLASVAEIERWNILQATFLAMRRAIAKLDRPISRCLIDGNQQVPQLTYPQTTVIQ 138 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD I+AASILAKV RD + LD +P Y +HKGY TA H + + + G T HR Sbjct: 139 GDRHCITIAAASILAKVWRDRLIERLDERYPGYALGRHKGYGTAQHRQAILQLGPTPLHR 198 Query: 185 RSF 187 F Sbjct: 199 IRF 201 >UniRef50_C9KJR4 Ribonuclease n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJR4_9FIRM Length = 259 Score = 230 bits (587), Expect = 2e-59, Method: Composition-based stats. Identities = 93/189 (49%), Positives = 121/189 (64%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 ++VAGVDE GRGPL G V AAVIL + LNDSKKLS K R L++EI+EK Sbjct: 65 WARGHEIVAGVDEAGRGPLAGPVSVAAVILPHDLCLPKLNDSKKLSAKVREELFDEIQEK 124 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A++ + ID +NI AT+ M A+ L AP+ VLID +LPMP+ +++K Sbjct: 125 AIAVGTALIDAQTIDRVNIYQATINGMYEAIFSLQPAPQEVLIDAVPLDRLPMPSESIIK 184 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD++ ISAASI+AKVTRD M D ++P+YGFAQHKGY TA H+E L ++G HR Sbjct: 185 GDAKSASISAASIIAKVTRDRLMDEYDKIYPEYGFAQHKGYGTAQHIEALKKYGPCPIHR 244 Query: 185 RSFGPVKRA 193 RSF PV+ Sbjct: 245 RSFEPVRSI 253 >UniRef50_Q1MRU8 Ribonuclease HII n=2 Tax=Desulfovibrionales RepID=RNH2_LAWIP Length = 224 Score = 230 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 116/199 (58%), Gaps = 11/199 (5%) Query: 3 EFVYPHTQLV-AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 E VY + L+ AG+DEVGRG L G VV AVIL I GL DSK +S RR L ++I Sbjct: 23 ELVYDNLSLLTAGLDEVGRGCLAGPVVAGAVILPDTISIDGLADSKTISSNRRYILAKKI 82 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM---- 117 E A+SW +G P EIDE+NIL A++ AM A L PE +LIDGN+ Sbjct: 83 YETAISWGIGVVWPKEIDEINILQASLKAMAHAATVLKTFPELLLIDGNKAIPQKFFIQF 142 Query: 118 ------PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHL 171 +++KGD+ +P ISAASI+AK RD M+ LD +PQY F+++KGY + H Sbjct: 143 GWNFLPIQHSIIKGDASIPAISAASIIAKTFRDTLMSKLDKRYPQYNFSKNKGYGSKTHR 202 Query: 172 EKLAEHGATEHHRRSFGPV 190 E L + G + HR +F V Sbjct: 203 EILQKIGPSPIHRMTFKGV 221 >UniRef50_C1QE08 Ribonuclease n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QE08_9SPIR Length = 232 Score = 230 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 115/200 (57%), Gaps = 11/200 (5%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD----------PARPIAGLNDSKKLSEK 52 E++ + + G+DEVGRG L G V AAVI+ + +DSKK+S K Sbjct: 21 EYLSLGYKYICGIDEVGRGCLFGPVTVAAVIMPLELNNDVEVARENIVEEADDSKKISAK 80 Query: 53 RRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC 112 +R LY++I KAL +S+ + IDE+NI +AT LAM AV L+I P+ +LID + Sbjct: 81 KREELYDKIISKALCYSVYSVDAKTIDEINIYNATKLAMVNAVRNLNIKPDILLIDAVKL 140 Query: 113 PKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLE 172 + + ++ KGD + I ASI+AKV RD M L V+ +Y A++KGY T H++ Sbjct: 141 -DIDIKQCSITKGDFKSYSIGCASIVAKVERDRMMNELPEVYQKYKVAKNKGYGTKEHMK 199 Query: 173 KLAEHGATEHHRRSFGPVKR 192 + +GA++ HR SF P+K Sbjct: 200 AIEMYGASDMHRYSFEPIKS 219 >UniRef50_C1FF37 Ribonuclease n=3 Tax=Mamiellales RepID=C1FF37_9CHLO Length = 262 Score = 229 bits (585), Expect = 3e-59, Method: Composition-based stats. Identities = 83/191 (43%), Positives = 116/191 (60%), Gaps = 2/191 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 ++V GVDE GRGPL G VV AA + I +NDSK+++E+ R +YEE+ Sbjct: 63 WSAGKKIVCGVDEAGRGPLAGPVVAAACVFPEDLVIDAINDSKQMTEEEREEVYEELMAN 122 Query: 65 ALSW-SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM-PAMAV 122 S+ + IDE+NIL ATM AM ++V GL ++VLIDGNR P + A A+ Sbjct: 123 DQVIKSVCVIDHERIDEINILEATMQAMAKSVEGLSTRADWVLIDGNRVPPPLIDRAEAI 182 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD++ I+AAS+LAKVTRD M + +P YGF QHKGY H++ + +HG + Sbjct: 183 VKGDAKSVCIAAASVLAKVTRDRMMVKIHDEYPVYGFDQHKGYGVKAHMDAIHKHGPCPY 242 Query: 183 HRRSFGPVKRA 193 HR++F P+K Sbjct: 243 HRKTFAPMKYM 253 >UniRef50_A9B6H3 Ribonuclease HII n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=RNH2_HERA2 Length = 207 Score = 229 bits (585), Expect = 3e-59, Method: Composition-based stats. Identities = 82/198 (41%), Positives = 109/198 (55%), Gaps = 5/198 (2%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-----IAGLNDSKKLSEKRRLAL 57 + ++VAGVDEVGRG G VV AAV +AG+NDSK LS + R A+ Sbjct: 10 QLWRNGARIVAGVDEVGRGCWAGPVVAAAVSFPTHLLNDPVALAGINDSKTLSAEARQAM 69 Query: 58 YEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM 117 ++I+ A LG H ID I AT AM AV L P+ ++ID + P+LP+ Sbjct: 70 AQQIRHLASGIGLGVVSAHLIDLFGIAEATKWAMMHAVLSLPSLPDGLVIDWVKLPELPL 129 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 ++ KGD+ ++AASI+AKV RD M D P+YG+A HKGY TA H LA H Sbjct: 130 LQRSLPKGDAISISVAAASIIAKVYRDNLMHEYDQRDPRYGWAAHKGYGTAQHQRALAAH 189 Query: 178 GATEHHRRSFGPVKRALG 195 G + HRRSF P+ + Sbjct: 190 GPSGLHRRSFKPLAAFVD 207 >UniRef50_C6X037 Ribonuclease n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X037_FLAB3 Length = 218 Score = 229 bits (585), Expect = 4e-59, Method: Composition-based stats. Identities = 83/188 (44%), Positives = 110/188 (58%), Gaps = 1/188 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 ++ + + AG DEVGRG L G VV AAVILD ++DSKKL+ K R+ L I Sbjct: 15 LKKKWSANYIEAGCDEVGRGCLCGPVVAAAVILDEKFVQNLVDDSKKLNFKTRIYLDAYI 74 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAM 120 K+ +++ P IDE NIL+A++ AM RA+ L PE +L+DGNR P +P Sbjct: 75 KDNVKEYAVAELPPSHIDEHNILNASIHAMHRALDQLQTRPELILVDGNRFHPYNFIPHQ 134 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 ++KGD+ + I+ ASILAK RD M L FP YG+ + GY T H E L +G T Sbjct: 135 CIIKGDASILSIACASILAKNYRDQLMIKLHDEFPHYGWKTNMGYATKEHREALNRYGPT 194 Query: 181 EHHRRSFG 188 EHHRRSF Sbjct: 195 EHHRRSFR 202 >UniRef50_Q0AMK3 Ribonuclease HII n=3 Tax=Proteobacteria RepID=RNH2_MARMM Length = 218 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 107/185 (57%), Positives = 123/185 (66%), Gaps = 2/185 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 +AGVDE GRGPL G VV AAVILDP RPI GL DSK LSE+RR L+ I+ A +G Sbjct: 24 IAGVDEAGRGPLSGPVVAAAVILDPTRPITGLGDSKALSERRRRELFRLIRANA-WVGIG 82 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGDSRVP 130 AEP EID LNILHATM AM+RAVA L + P VL+DGNR P LP PA A++KGD++ Sbjct: 83 IAEPAEIDRLNILHATMAAMRRAVARLPVRPTLVLVDGNRLPPGLPCPAEAIIKGDAKEA 142 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I AASI+AK RD M FP YGF HKGYP+A H L GA HRRS+ PV Sbjct: 143 CIGAASIIAKTVRDDLMEQAARRFPGYGFEGHKGYPSAAHKAALETSGACPIHRRSYAPV 202 Query: 191 KRALG 195 + AL Sbjct: 203 RAALE 207 >UniRef50_A0LMM5 Ribonuclease HII n=10 Tax=Bacteria RepID=RNH2_SYNFM Length = 233 Score = 228 bits (582), Expect = 9e-59, Method: Composition-based stats. Identities = 86/189 (45%), Positives = 112/189 (59%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + QLVAG+DEVGRGPL G VV AAV++ + G+ DSKKLS +R + E+I Sbjct: 19 QAYRQGFQLVAGIDEVGRGPLAGPVVAAAVVVPAGVRLPGVADSKKLSAGQRESCCEDIL 78 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 +GR EP EID +NIL AT AM AVAGL P +LIDG L + + Sbjct: 79 SCGCDVGIGRVEPSEIDRVNILQATFQAMIAAVAGLKTPPHCLLIDGPYELPLFIAQKGI 138 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +GD++ I+AASI+AKV RD M + +P YGF ++KGY TA HL+ L +G Sbjct: 139 PQGDAKSLSIAAASIVAKVHRDRLMCEYHLKYPVYGFDRNKGYGTARHLDALRRYGPCPI 198 Query: 183 HRRSFGPVK 191 HR SFG V+ Sbjct: 199 HRLSFGGVR 207 >UniRef50_C4V2D5 Ribonuclease n=2 Tax=Clostridiales RepID=C4V2D5_9FIRM Length = 259 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 90/189 (47%), Positives = 116/189 (61%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 +VAG+DE GRGPL G V AAVIL + LNDSKKLSEK R LYE I A Sbjct: 60 ERGNCIVAGIDEAGRGPLAGPVAVAAVILPQEYLLLRLNDSKKLSEKVREELYETIVSDA 119 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 +S+ + + ID +NIL AT M AVA L P+ VLID P+L M + ++VKG Sbjct: 120 VSYHVELIDAETIDRMNILEATRRGMYDAVAALLPTPQEVLIDAVALPRLRMASQSIVKG 179 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D++ I+AASILAKVTRD M D +P YGFAQHKGY T H+E + ++G HR+ Sbjct: 180 DAKSASIAAASILAKVTRDRLMLTYDKEYPVYGFAQHKGYGTREHIEAIRKYGICPLHRK 239 Query: 186 SFGPVKRAL 194 +F P++ + Sbjct: 240 TFEPIRSMI 248 >UniRef50_C6BVQ6 Ribonuclease n=4 Tax=Desulfovibrionales RepID=C6BVQ6_DESAD Length = 218 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 87/187 (46%), Positives = 110/187 (58%), Gaps = 7/187 (3%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 + AG+DE GRG L G VV AVIL + GL DSKKL E R L EIK++A+ W+L Sbjct: 15 ITAGIDEAGRGCLAGPVVAGAVILPEEYDLPGLTDSKKLDEAARDRLAVEIKKQAVCWAL 74 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC---PKLP----MPAMAVV 123 G + +D++NIL AT AM R+V L + P+ +++DGN+ P L AVV Sbjct: 75 GVSRAQVVDQINILQATFRAMGRSVLHLKVKPQMLMVDGNKTIPAPHLNGVAGFRQEAVV 134 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGD ++P ISAASILAK RD M L + YGF HKGY T HL+ L EHG H Sbjct: 135 KGDLKIPAISAASILAKTFRDKLMVQLAKRYAAYGFEIHKGYGTKVHLDALKEHGPCAVH 194 Query: 184 RRSFGPV 190 R +F V Sbjct: 195 RMTFKGV 201 >UniRef50_D1VVL3 Ribonuclease n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVL3_9FIRM Length = 205 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 78/191 (40%), Positives = 115/191 (60%), Gaps = 7/191 (3%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 ++ ++L+AG+DEVGRG L G V++ A+I+ I G+NDSKKL+ K+R LY +I Sbjct: 9 DYRKKGSKLIAGIDEVGRGSLFGDVLSCAIIMKEDSNIEGVNDSKKLTAKKRKELYNKIL 68 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH------IAPEYVLIDGNRCPKLP 116 E +L+ +GRA+ ID+LNI AT L+M RA+ L + P+ VLID + Sbjct: 69 EDSLAVGIGRADAKTIDKLNIKMATHLSMVRAIENLRDSQGNLVVPDLVLIDAENI-ETT 127 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 + +++KGD I+ ASI+AKV RD+ ++P YG +HKGY T FH E L Sbjct: 128 IFQHSIIKGDENCYSIACASIIAKVYRDSLCDKWATIYPGYGIEKHKGYGTKFHREALKA 187 Query: 177 HGATEHHRRSF 187 +G + HR+SF Sbjct: 188 YGPSPMHRKSF 198 >UniRef50_C3MHC0 Ribonuclease HII n=12 Tax=Alphaproteobacteria RepID=RNH2_RHISN Length = 231 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 95/190 (50%), Positives = 112/190 (58%), Gaps = 2/190 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 VAG DE GRGPL G VV AAVILDP GLNDSK L+ ++R AL+ EI Sbjct: 28 KRDGFWPVAGADEAGRGPLAGPVVAAAVILDPDAVPGGLNDSKLLTAEQREALFTEIMAT 87 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVV 123 A S+ + ID +IL A++ AM+RA+ GL IA + LIDG P LP A A+V Sbjct: 88 AT-VSIASSSAAHIDATDILKASLDAMRRAIDGLSIAARFALIDGRDVPQGLPCHAKAIV 146 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGDSR I+AASI+AKVTRD MA D FP YGFA H GY T H + HG H Sbjct: 147 KGDSRSVSIAAASIVAKVTRDRMMARADATFPAYGFALHAGYATVRHRSAIDSHGPCSLH 206 Query: 184 RRSFGPVKRA 193 R SF P + A Sbjct: 207 RMSFRPFREA 216 >UniRef50_Q5FFD4 Ribonuclease HII n=5 Tax=Rickettsiales RepID=RNH2_EHRRG Length = 220 Score = 226 bits (577), Expect = 3e-58, Method: Composition-based stats. Identities = 87/197 (44%), Positives = 123/197 (62%), Gaps = 5/197 (2%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP--ARPIAGLNDSKKLSEKRRLALY 58 +++ ++ GVDEVG G L G VV+AAV +NDSKKL+ K R +Y Sbjct: 18 ILKLKNNKECIIVGVDEVGYGSLAGPVVSAAVFFPNYNNETTQDINDSKKLTPKTRQKIY 77 Query: 59 EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL--HIAPEYVLIDGNRCPKLP 116 +I + + WS+G A EIDE NIL+AT +AM+RA+ GL HI +YV+IDGN+ P +P Sbjct: 78 NKIITR-VKWSIGFAHIFEIDEYNILNATHIAMKRALTGLNAHIDIDYVIIDGNKIPNIP 136 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 A A++ GD+ I+AASI+AKVTRD M L I +PQY + ++KGY T H+ L + Sbjct: 137 WNAQAIIGGDTISTSIAAASIIAKVTRDRLMETLHIQYPQYNWNKNKGYGTKDHITSLYK 196 Query: 177 HGATEHHRRSFGPVKRA 193 +G T HHR +F P+ + Sbjct: 197 YGKTIHHRNTFTPISKI 213 >UniRef50_Q8YP68 Ribonuclease HII n=19 Tax=Cyanobacteria RepID=RNH2_ANASP Length = 225 Score = 226 bits (577), Expect = 3e-58, Method: Composition-based stats. Identities = 90/192 (46%), Positives = 114/192 (59%), Gaps = 5/192 (2%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEE 60 + LVAGVDEVGRG L G VV A+VIL P A + DSKKLS RR+ L ++ Sbjct: 30 WSNISGLVAGVDEVGRGALFGPVVAASVILPASAFPHLMTAEIKDSKKLSHSRRVQLAQQ 89 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN-RCPKLPMPA 119 I A+ W +G A EID +NIL AT+LAM+R+V L + P LIDGN L M Sbjct: 90 ISTLAIDWRIGYATTAEIDRINILQATLLAMKRSVKKLKLQPILCLIDGNQPVQDLLMLQ 149 Query: 120 MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA 179 +VKGD R I+AASI+AKV RD + L +P Y +KGY + HL LA+HGA Sbjct: 150 QTIVKGDERSLNIAAASIMAKVWRDDLIQRLATKYPMYDLKSNKGYGSKKHLLALAQHGA 209 Query: 180 TEHHRRSFGPVK 191 + HR+SF P + Sbjct: 210 SPLHRQSFRPCQ 221 >UniRef50_Q2SRV0 Ribonuclease HII n=5 Tax=Mollicutes RepID=RNH2_MYCCT Length = 207 Score = 226 bits (577), Expect = 3e-58, Method: Composition-based stats. Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 1/187 (0%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 + ++G DE GRG L G +V A+VIL P + DSKKL+ K R L++EI + L Sbjct: 16 NITYLSGSDEAGRGCLAGPLVVASVILKPDYFNPLIKDSKKLNPKTRQVLFDEIIKNCLD 75 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL-PMPAMAVVKGD 126 + + ++DELN L A++L + ++ L I P+ LIDGN+ L + ++++KGD Sbjct: 76 YQIMIISSKQVDELNPLQASLLGFKTTISNLKITPDLALIDGNQNINLENIKTLSIIKGD 135 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 I+ +SILAKVTRD + D ++P YGF HKGY T HL + ++G + HR+S Sbjct: 136 DNSFSIACSSILAKVTRDKILDQYDQIYPNYGFKSHKGYCTKKHLLAIQKYGVLDIHRKS 195 Query: 187 FGPVKRA 193 + P+K+ Sbjct: 196 YKPIKKI 202 >UniRef50_O67768 Ribonuclease HII n=3 Tax=Aquificaceae RepID=RNH2_AQUAE Length = 196 Score = 226 bits (576), Expect = 5e-58, Method: Composition-based stats. Identities = 86/193 (44%), Positives = 111/193 (57%), Gaps = 3/193 (1%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 +E LVAGVDE GRGPL G VV AAVIL P DSKKL++K R YEEI Sbjct: 6 LELWEKGL-LVAGVDEAGRGPLAGPVVAAAVILPPFTEPFIKGDSKKLTKKEREEAYEEI 64 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 K KAL+ + ID +NIL AT LAM+RA+ L + V+ D + M Sbjct: 65 KNKALAVGTAVVDSAVIDRVNILRATKLAMKRALKDLKYHYDIVITDYVKLEGENC--MP 122 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +VKGD + + ASI+AKV RD M ++P + FA +KGYP+ HLEK+ + TE Sbjct: 123 LVKGDEKSLNCACASIIAKVIRDKIMEIYHKIYPDFNFASNKGYPSKTHLEKVEKGEYTE 182 Query: 182 HHRRSFGPVKRAL 194 HR+SF P+K+ L Sbjct: 183 IHRKSFSPLKKKL 195 >UniRef50_Q11R91 Ribonuclease HII n=55 Tax=Bacteroidetes RepID=RNH2_CYTH3 Length = 202 Score = 225 bits (575), Expect = 5e-58, Method: Composition-based stats. Identities = 81/198 (40%), Positives = 113/198 (57%), Gaps = 3/198 (1%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 ++ F ++ AG+DE GRG + G VV AAVIL P + LNDSKKL+ K+R L ++ Sbjct: 5 LLSFHSEG-KIEAGLDEAGRGCMAGPVVAAAVILPPNYKHSLLNDSKKLTIKQRELLRQD 63 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL-HIAPEYVLIDGNRCPK-LPMP 118 I AL + + ID++NIL+ATM AM +AV GL P +LIDGNR + + Sbjct: 64 IIRDALDYHVAEVSHTVIDQINILNATMKAMHKAVKGLKKQQPNLLLIDGNRFKQYTGIE 123 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 + +V+GD I+AAS+LAK RD+ M L P+YG+ + GY T H + HG Sbjct: 124 HVCIVQGDGLYLSIAAASVLAKTHRDSLMERLAKEHPEYGWDVNAGYATEKHRLAMETHG 183 Query: 179 ATEHHRRSFGPVKRALGL 196 T +HR SF + L L Sbjct: 184 LTPYHRTSFHFKPKQLDL 201 >UniRef50_Q0SSB4 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2_CLOPS Length = 272 Score = 225 bits (574), Expect = 7e-58, Method: Composition-based stats. Identities = 87/196 (44%), Positives = 112/196 (57%), Gaps = 5/196 (2%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP---ARPIAGLNDSKKLSEKRRLALY 58 + + + VAGVDEVGRGPL G +V+AAVILD I +NDSKKLSE +R L Sbjct: 79 FDKSFGDYKYVAGVDEVGRGPLAGPIVSAAVILDSSNLDDIILYINDSKKLSEHKREELS 138 Query: 59 EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP 118 E IKEKALS+S+ + EIDE I + +A GL+I P+ VL DG Sbjct: 139 EIIKEKALSYSISMCDSKEIDEKGIGYCNNHVFIKACEGLNIKPDLVLSDGYLIKNFNGE 198 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 V+KGD++ I+ ASI+AKV RD M +PQY F ++ GY T H++ L E G Sbjct: 199 NKHVIKGDTKSACIACASIIAKVYRDNIMKEYHKKYPQYDFEKNVGYGTKTHVDALKEVG 258 Query: 179 ATEHHRRSFGPVKRAL 194 TE HR SF +K L Sbjct: 259 PTEIHRMSF--LKNIL 272 >UniRef50_A8MHC7 Ribonuclease HII n=3 Tax=Firmicutes RepID=RNH2_ALKOO Length = 203 Score = 225 bits (574), Expect = 7e-58, Method: Composition-based stats. Identities = 84/190 (44%), Positives = 110/190 (57%), Gaps = 7/190 (3%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + +A DEVGRG L G+V+ AAVI+ I G+ DSKKLS K+R LYE IKE Sbjct: 10 IWNSGYENIACCDEVGRGCLFGSVLAAAVIMPKDVIIDGVKDSKKLSHKKREQLYEIIKE 69 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIA------PEYVLIDGNRCPKLPM 117 K+L+ +G ID++NI +AT LAM++A+ L P+Y+LID +P Sbjct: 70 KSLAIGVGTVSSEIIDKINIKNATRLAMKKAILSLKDKDGNIVAPDYILIDAEEI-DVPT 128 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 P AV+KGD I+AASI+AKV RD + P YG Q+KGY T H E L EH Sbjct: 129 PQSAVIKGDDLCHGIAAASIVAKVLRDRLCQRWEEEHPNYGIGQNKGYGTKAHREALKEH 188 Query: 178 GATEHHRRSF 187 G + HR+SF Sbjct: 189 GPSPMHRKSF 198 >UniRef50_C9LMH5 Ribonuclease n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMH5_9FIRM Length = 256 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 92/192 (47%), Positives = 122/192 (63%), Gaps = 1/192 (0%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 F + VAG+DEVGRGPL G V AAVIL P IAGLNDSKK++ +RR + ++I E Sbjct: 62 FYKKGLEYVAGIDEVGRGPLAGPVTVAAVILKPHFFIAGLNDSKKVAPRRREEIAKKIHE 121 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 A+ S+ P EID NI ATM AM RAV L I P+ V++D P+P++++V Sbjct: 122 TAVDISIVSLSPEEIDMRNIYAATMEAMYRAVRNLKIQPQAVIVDAMPL-HFPVPSLSLV 180 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD++ ++AASI+AKV RD M D V+P YGF+Q+KGY TA H+E + G T H Sbjct: 181 HGDAKSASVAAASIVAKVHRDHLMDEYDKVYPGYGFSQNKGYGTAEHIEAIRTLGITPIH 240 Query: 184 RRSFGPVKRALG 195 R+SF PVK + Sbjct: 241 RKSFEPVKSMVN 252 >UniRef50_Q6MLA0 Ribonuclease HII n=1 Tax=Bdellovibrio bacteriovorus RepID=RNH2_BDEBA Length = 221 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 89/185 (48%), Positives = 113/185 (61%), Gaps = 3/185 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + GVDEVGRG L G V AAVI + DSK LSEKRR L + I ++ + +G Sbjct: 38 IIGVDEVGRGCLAGPVYAAAVIFKSDALNDLVTDSKLLSEKRREELADLILKEHI-VGIG 96 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLP-MPAMAVVKGDSRV 129 A EIDE+NIL+A++LAM+RAV L + +VL+DGN+ P L +VKGD RV Sbjct: 97 SASVEEIDEINILNASLLAMKRAVEKLGVKSGHVLVDGNKKIPNLKGFEQSTIVKGDLRV 156 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 ISAASI+AKVTRD M L + +P YGF HKGY T H + + +HG HRRSF Sbjct: 157 APISAASIVAKVTRDRLMKDLGVKYPHYGFEIHKGYSTPVHKQSIVDHGPCIAHRRSFAG 216 Query: 190 VKRAL 194 VK + Sbjct: 217 VKEYV 221 >UniRef50_A5N820 Ribonuclease HII n=17 Tax=Clostridium RepID=RNH2_CLOK5 Length = 288 Score = 223 bits (570), Expect = 2e-57, Method: Composition-based stats. Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 5/191 (2%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD-----PARPIAGLNDSKKLSEKRRLA 56 + + + VAG DEVGRGPL G +V AAVIL+ + I G+ DSKKL++K R Sbjct: 93 FDKYFGNYIYVAGTDEVGRGPLAGPIVAAAVILNLNYVEDKKLILGVKDSKKLTQKARYE 152 Query: 57 LYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP 116 L + IKEKALS+S+ EID+ I +++AV GL + E VL DG LP Sbjct: 153 LSQTIKEKALSYSIAVINNKEIDKRGISWCNNEVLRKAVLGLKLPVELVLSDGYAVKNLP 212 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 + V+KGDS+ I++ASI+AKV RD M V+ +Y F + GY T H+ + + Sbjct: 213 VRNEFVIKGDSKSVSIASASIIAKVYRDELMREYSKVYTEYNFQSNSGYGTKEHIGAIKK 272 Query: 177 HGATEHHRRSF 187 +G + HR SF Sbjct: 273 YGTCKIHRLSF 283 >UniRef50_A9TVJ6 Ribonuclease n=2 Tax=cellular organisms RepID=A9TVJ6_PHYPA Length = 655 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 88/226 (38%), Positives = 110/226 (48%), Gaps = 36/226 (15%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG------------------- 42 ++ + VAGVDE GRGPL G VV AA I+ + I G Sbjct: 423 MKLWELGFRNVAGVDEAGRGPLAGPVVAAACIIPASATIPGKICFCVSQWSCRASGPCQE 482 Query: 43 -----LNDSKKLSEKRRLALYEEIKEKALSW-----SLGRAEPHEIDELNILHATMLAMQ 92 LN + E + +E SW + + +IDE+NIL AT+LAM Sbjct: 483 EPYVRLNGVAQWKETFTVHHLWMSRELWCSWFRVAGQIHVVDAAKIDEINILQATLLAMS 542 Query: 93 RAVAGL-----HIAPEYVLIDGNRCPKL--PMPAMAVVKGDSRVPEISAASILAKVTRDA 145 V L AP+Y+LIDGNR P A V+KGD+ I+AASILAKVTRD Sbjct: 543 TCVKKLRKERGGEAPDYILIDGNRIPDELSKEEAQFVIKGDAECHVIAAASILAKVTRDR 602 Query: 146 EMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK 191 M D +P YGF HKGY TA H+ L HG + HRRSF P+K Sbjct: 603 MMVDYDRRWPVYGFKAHKGYGTAAHIGALLNHGPCDIHRRSFAPLK 648 >UniRef50_A3ER37 Ribonuclease n=2 Tax=Leptospirillum sp. Group II RepID=A3ER37_9BACT Length = 228 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 87/197 (44%), Positives = 111/197 (56%), Gaps = 6/197 (3%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD---PARPIAGLNDSKKLSEKRRLALYE 59 EF VAGVDEVGRG L G VV AAVIL G+ DSK LS +R+AL + Sbjct: 11 EFYKKGFLRVAGVDEVGRGALAGPVVAAAVILPMPLEFFENIGIRDSKLLSPSKRVALSD 70 Query: 60 EIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMP 118 ++ SWS+G + EI+ LNI AT+LAM+RAV GL P+ +L+DG P L Sbjct: 71 RLRSLLFSWSVGESTVSEINALNIRRATLLAMKRAVEGLPEFPDILLVDGREIVPDLVCK 130 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 + GD R+ I+AASI+AKV RD M+ LD + YG A++KGY TA H + L G Sbjct: 131 QESFTGGDRRILSIAAASIIAKVYRDNMMSELDNAYAGYGLAENKGYGTAQHRDGLLLRG 190 Query: 179 ATEHHRRSFGPVKRALG 195 + HR F K L Sbjct: 191 VSSIHRAVF--CKTFLE 205 >UniRef50_Q6NGJ8 Ribonuclease HII n=1 Tax=Corynebacterium diphtheriae RepID=RNH2_CORDI Length = 229 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 82/184 (44%), Positives = 108/184 (58%), Gaps = 2/184 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILD--PARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 VAGVDE GRG G + AA I+ P + L DSKKLS +R LY IK+ AL+WS Sbjct: 36 VAGVDEAGRGSCCGPITIAACIMPQRPIAQLQALTDSKKLSAAKRAELYPLIKKYALAWS 95 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRV 129 + EID I HA + M+RA+ L +AP YVL D + P L P++ ++ GD+ V Sbjct: 96 IIHISAAEIDREGIQHANIFGMRRAIEKLDVAPGYVLTDAMKVPGLRCPSLPIIGGDAAV 155 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 I+AAS+LAK +RD M L +P+YG HKGY T H++ + HGAT HR S+ Sbjct: 156 RCIAAASVLAKHSRDLIMDDLGGKYPEYGLEDHKGYGTKSHMDAVRHHGATPEHRYSYSN 215 Query: 190 VKRA 193 VK A Sbjct: 216 VKAA 219 >UniRef50_Q5PBG2 Ribonuclease HII n=6 Tax=Anaplasmataceae RepID=RNH2_ANAMM Length = 243 Score = 223 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 79/194 (40%), Positives = 112/194 (57%), Gaps = 4/194 (2%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPAR--PIAGLNDSKKLSEKRRLALYEE 60 + ++ GVDEVG G + G VV AAV L I + DSK LS K+R L+ + Sbjct: 16 QLRSGTISVIVGVDEVGYGAIAGPVVAAAVYLPERECDYIKDIKDSKALSSKKREELFCK 75 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPA 119 I A + +G A EI++ NIL A+ ++M+RA+ L + + VL+DG+R P LP Sbjct: 76 ITAHA-KYGVGFARVREIEQHNILVASHISMKRALQNLGVKADLVLVDGSRAPAGLPWAV 134 Query: 120 MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA 179 +VKGDS I+AASI+AKVTRD M L +P+Y + Q+ GY T H++ L +G Sbjct: 135 KTIVKGDSISTSIAAASIIAKVTRDRFMRRLHEQYPEYAWNQNCGYGTKAHMQSLKLYGK 194 Query: 180 TEHHRRSFGPVKRA 193 T HR +F PVK+ Sbjct: 195 TAQHRSTFAPVKQL 208 >UniRef50_Q7VRD2 Ribonuclease HII n=1 Tax=Candidatus Blochmannia floridanus RepID=RNH2_BLOFL Length = 205 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 95/199 (47%), Positives = 128/199 (64%), Gaps = 5/199 (2%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVIL---DPARPIAGLNDSKKLSEKRRLALYEE 60 F+ +VAGVDEVG G LVGAVV +AV++ D + +GL DSK LS K+RL Sbjct: 7 FLSKKATIVAGVDEVGCGSLVGAVVASAVLMLYPDQEQLFSGLIDSKALSNKKRLRFCNY 66 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPA- 119 I++ +L WS+G EID+LNI A +L+++RA+ L + P+ VLIDG P L Sbjct: 67 IQKYSLHWSIGMVNVTEIDQLNIFQARLLSIKRAICNLSMIPDLVLIDGKHAPSLNKNIL 126 Query: 120 -MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 VKGDSR+P ISAASI+AKVTRD M L +P+YGF ++KGY T FHL++L +G Sbjct: 127 YQCFVKGDSRIPVISAASIIAKVTRDQAMMMLHTQYPKYGFHRNKGYATVFHLKQLDLYG 186 Query: 179 ATEHHRRSFGPVKRALGLA 197 T +HR++F PVK L + Sbjct: 187 PTIYHRKTFAPVKYMLSMC 205 >UniRef50_Q14PF8 Ribonuclease n=1 Tax=Spiroplasma citri RepID=Q14PF8_SPICI Length = 207 Score = 222 bits (566), Expect = 6e-57, Method: Composition-based stats. Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 1/187 (0%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 YP+T ++AG DE GRG L G +V +AVIL + DSKK++ K+R+ L +EI A Sbjct: 12 YPNTTILAGTDEAGRGCLAGPLVVSAVILPLDYVNDEIKDSKKITAKQRIKLADEIMSIA 71 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 +S+++ +ELN A++ MQ+A+ L + + +L D + A++KG Sbjct: 72 ISYTIEIISVAMFEELNPKQASIFGMQQAIDNLMVKSDIILTDAEKL-GPSYNHQAIIKG 130 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 DS I AASILAKVTRD M D +PQY F +KGY T HL L + G T HR+ Sbjct: 131 DSLSQSIVAASILAKVTRDNLMLKFDQDYPQYDFKNNKGYGTKKHLLALQQFGITSLHRK 190 Query: 186 SFGPVKR 192 ++ PV+ Sbjct: 191 TYRPVRE 197 >UniRef50_A1HN67 Ribonuclease n=3 Tax=Veillonellaceae RepID=A1HN67_9FIRM Length = 265 Score = 222 bits (566), Expect = 7e-57, Method: Composition-based stats. Identities = 87/194 (44%), Positives = 114/194 (58%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 F L+AGVDE GRGPL G VV AAVIL + + LNDSKKLS +R LYE+I Sbjct: 72 FYEQGLDLIAGVDEAGRGPLAGPVVVAAVILPKRQHLPMLNDSKKLSPHQRSLLYEKIIG 131 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 A++ + +ID +NI AT+ M R + L P+ LID K+ +P M+++ Sbjct: 132 TAVAVNHVVIPVCQIDSMNIYQATLQGMYRVLENLSPKPQVALIDAMPLRKIVLPHMSII 191 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD+ I+AASI+AKV RD M +D+++P YGFA+HKGY T HL L G H Sbjct: 192 NGDALSASIAAASIVAKVVRDRYMDEMDVLYPGYGFAKHKGYATPEHLAALRRLGPCPIH 251 Query: 184 RRSFGPVKRALGLA 197 RRSF P+K GL Sbjct: 252 RRSFEPIKSWGGLG 265 >UniRef50_C0GQX3 Ribonuclease n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQX3_9DELT Length = 214 Score = 222 bits (566), Expect = 7e-57, Method: Composition-based stats. Identities = 95/189 (50%), Positives = 114/189 (60%), Gaps = 2/189 (1%) Query: 4 FVYPHTQLV--AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 + V AG+DE GRG L G VV A V+L IA L DSKK++ K R +L EI Sbjct: 12 NLQSGFDPVPPAGLDEAGRGCLAGPVVAAVVVLPLDAQIARLTDSKKITSKVRESLIPEI 71 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 K L+WSLG A P EID +NIL ATM AM+RAV L + P +L+DGN+ L +P Sbjct: 72 KSTCLAWSLGLAWPREIDRINILQATMTAMKRAVLHLGLTPGQLLVDGNQKIPLNIPQKC 131 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +V GD P ISAASILAK RD M LD +P YGF QHKGY T HL+ L GA+ Sbjct: 132 IVGGDMTEPCISAASILAKTFRDMLMTKLDRRYPGYGFGQHKGYGTRKHLQALKSLGASP 191 Query: 182 HHRRSFGPV 190 HR+SF V Sbjct: 192 MHRKSFKGV 200 >UniRef50_Q03S83 Ribonuclease HII n=39 Tax=Lactobacillaceae RepID=RNH2_LACBA Length = 257 Score = 222 bits (566), Expect = 7e-57, Method: Composition-based stats. Identities = 93/190 (48%), Positives = 129/190 (67%), Gaps = 1/190 (0%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 + + VAG+DEVGRGPL G VVT+AVIL P I +NDSK+L+ K R LY I + Sbjct: 67 FWARGERVAGIDEVGRGPLAGPVVTSAVILPPDFDIPLVNDSKQLTAKERERLYPLILAQ 126 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A S S+G P ID++NI AT +AMQRAV GL +AP+ +++D + P + +P + ++K Sbjct: 127 AQSVSIGIGSPALIDQINIYQATRVAMQRAVLGLGLAPQQLIVDAMQIP-VDVPQIRLIK 185 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD++ ++AASI+AKV RD MA D ++P YGFAQ+ GY TA HL+ LA+ G T HR Sbjct: 186 GDAKSASVAAASIVAKVYRDHLMATYDELYPGYGFAQNAGYGTAEHLQGLADRGVTPIHR 245 Query: 185 RSFGPVKRAL 194 R+F PV++ L Sbjct: 246 RTFSPVQKIL 255 >UniRef50_A5HUH4 Ribonuclease n=1 Tax=uncultured bacterium RepID=A5HUH4_9BACT Length = 229 Score = 221 bits (565), Expect = 8e-57, Method: Composition-based stats. Identities = 82/207 (39%), Positives = 105/207 (50%), Gaps = 13/207 (6%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG---LNDSKKLSEKRRLALY 58 +E V GVDE GRGP G V AA + PA + L DSKKLS +R + Sbjct: 21 LESAASGNGAVIGVDEAGRGPWAGPVTAAAFWIYPAAKDSLPASLTDSKKLSASKRQQIE 80 Query: 59 EEIK--EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEY--------VLID 108 + + W++ + ++ID IL AT AM AVA L + VL+D Sbjct: 81 QALCAPHSQHLWAVKHSSVNQIDTCGILPATFAAMAEAVAELAKTLQKRHNLPVAMVLVD 140 Query: 109 GNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTA 168 GN P L P AVV+GDSR I+AASILAK +RD M L +P YG+ + GY T Sbjct: 141 GNLLPPLDFPCQAVVRGDSRSLSIAAASILAKQSRDEVMTELASHYPDYGWQTNAGYGTK 200 Query: 169 FHLEKLAEHGATEHHRRSFGPVKRALG 195 H + L G T HHR+SF P+K L Sbjct: 201 AHQQALQRCGITPHHRKSFAPIKAHLS 227 >UniRef50_C5RBD5 Ribonuclease n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD5_WEIPA Length = 254 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 83/190 (43%), Positives = 116/190 (61%), Gaps = 1/190 (0%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 + ++VAG+DEVGRGPL G VV AAV++D + + ++DSK+LSEK R ++ EI+EK Sbjct: 66 WQQGKVVAGIDEVGRGPLAGPVVAAAVVIDDSFDMTIVHDSKQLSEKTRQSIDTEIREKV 125 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 + ++ G + +ID LNI A+ +AM+++V L + + +LID L +P ++KG Sbjct: 126 VDFAFGVVDAKDIDRLNIYEASRVAMRQSVEALSVPIDGLLIDAMTV-DLEIPQEKLIKG 184 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 D R I AASILAK RD M FP YGF + GY TA HL L G T HR+ Sbjct: 185 DDRSISIGAASILAKNYRDNLMKDFAQQFPGYGFEHNAGYGTAEHLAGLNTLGITPIHRK 244 Query: 186 SFGPVKRALG 195 SF PVK+ L Sbjct: 245 SFAPVKKFLN 254 >UniRef50_A5IZB4 Ribonuclease n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZB4_MYCAP Length = 206 Score = 221 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 64/191 (33%), Positives = 107/191 (56%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 + +L+AGVDE GRG G +V A+VI+ + DSKKLS K+R L++EI + Sbjct: 9 WNDYKLIAGVDEAGRGCCAGPLVVASVIMPNGYINENIKDSKKLSAKQRDILFDEILKVC 68 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKG 125 + + + +D+ N ++ M+ + L+ P+ V+ D + +L + + +VKG Sbjct: 69 IDYHIVTLPSSYVDKYNPKKSSKNGMKICIDSLNTKPDLVITDFEKIDELAIKQVNLVKG 128 Query: 126 DSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRR 185 DS ++ ASILAKVTRD M + + +Y F +HKGY T H E + ++GA+ HR Sbjct: 129 DSISFNVACASILAKVTRDRYMIKIANKYKEYEFEKHKGYCTKRHTESIIKYGASPEHRL 188 Query: 186 SFGPVKRALGL 196 ++ V+ A+ + Sbjct: 189 TYKNVREAISI 199 >UniRef50_Q04F44 Ribonuclease n=2 Tax=Oenococcus oeni RepID=Q04F44_OENOB Length = 209 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 1/192 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E Q++AG+DEVGRG + G VV + IL ++ DSK+ ++++R L EEIK Sbjct: 19 ELNDEGYQIIAGIDEVGRGCVAGPVVACSCILPANFNVSETYDSKRFNKRQRFLLEEEIK 78 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 + + ++ G A EID +NI + LAM+R+V L P+ +LID L + + + Sbjct: 79 KTSCLFAFGEASVTEIDLINIYQSARLAMKRSVMNLLQMPDALLIDAMAV-DLNLKQLKI 137 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 + GD I+AASILAK RD M + +P+YGF ++ GY T+ + L E+G T Sbjct: 138 IHGDQLSNSIAAASILAKCHRDRIMIKMAEKYPEYGFERNVGYLTSEAKKALLEYGITPI 197 Query: 183 HRRSFGPVKRAL 194 HR++F P+ + + Sbjct: 198 HRKTFAPISKLI 209 >UniRef50_B2V752 Ribonuclease HII n=3 Tax=Sulfurihydrogenibium RepID=RNH2_SULSY Length = 197 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 1/185 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E + + G+DE GRGPL G +V A+VI + DSK LSEK R L+E+I Sbjct: 7 ELFSQGYEKIVGIDEAGRGPLAGPLVIASVIFPKHQKPFIHTDSKGLSEKEREYLFEKIH 66 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 + A ++ E EID+ I +A + M+ + L + L+D + + + + + Sbjct: 67 DYAEEINITIVENTEIDKFGISNAAKIYMENNLKSLKSKWDIALVDFVKLDE-SINHLPL 125 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD I+AASI+AKV RD M +P + F +HKGY T H +++ + G T Sbjct: 126 IKGDEISHTIAAASIIAKVVRDRIMIEYKEKYPNFSFDKHKGYATKQHYQEIKKFGITPI 185 Query: 183 HRRSF 187 HRRSF Sbjct: 186 HRRSF 190 >UniRef50_C4LJB6 Ribonuclease n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJB6_CORK4 Length = 261 Score = 219 bits (560), Expect = 3e-56, Method: Composition-based stats. Identities = 81/195 (41%), Positives = 104/195 (53%), Gaps = 2/195 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD--PARPIAGLNDSKKLSEKRRLALYEEI 61 V VAGVDE GRG G + AA IL P P+ L DSKKLS R L+ I Sbjct: 60 LVKAGLGPVAGVDEAGRGACCGPMAIAACILPAKPIHPLDKLTDSKKLSPTMREKLFPII 119 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 K+ A SWS+ +ID+ + + M+RAV L P YVL D R L P + Sbjct: 120 KDSAESWSVILIPAADIDKYGVQAMNIAGMRRAVGVLDQRPHYVLTDAMRVDGLTQPHLP 179 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++ GDS I+AAS+LAKVTRD M L +P YG +HKGY TA H++ + HG T Sbjct: 180 IIGGDSAARCIAAASVLAKVTRDRYMCDLAERYPGYGLEKHKGYGTAQHIDAVRLHGGTP 239 Query: 182 HHRRSFGPVKRALGL 196 HR ++ V A+G Sbjct: 240 EHRYTYRNVAEAVGA 254 >UniRef50_C1AAT1 Ribonuclease n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAT1_GEMAT Length = 228 Score = 219 bits (559), Expect = 4e-56, Method: Composition-based stats. Identities = 89/199 (44%), Positives = 122/199 (61%), Gaps = 6/199 (3%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEEIK 62 + L+ GVDEVGRGPL G VV A+++ R IAG++DSK+L + R+ L I+ Sbjct: 11 LRAQYGSLLVGVDEVGRGPLAGPVVACAIVMPADRRAIAGVDDSKRLDHRTRVTLAARIR 70 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAG----LHIAPEYVLIDGNRCPKLPMP 118 + AL+ SLG A E+D LNI HAT+LAMQRA+A L P +V++DG L + Sbjct: 71 DHALALSLGAASAREVDRLNIYHATVLAMQRALARIPQRLGAEPHHVVVDGKPLRTLGVV 130 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 AVVKGD++ I+ ASI+AKVTRD M AL Y + ++ GY T H + +++HG Sbjct: 131 HTAVVKGDAKCYGIACASIVAKVTRDRLMTALAQRHGHYAWERNAGYGTTQHRDGISQHG 190 Query: 179 ATEHHRRSFG-PVKRALGL 196 T HHRRSF V+ +L L Sbjct: 191 LTAHHRRSFCLNVQTSLAL 209 >UniRef50_D2SE00 Ribonuclease H n=2 Tax=Actinomycetales RepID=D2SE00_9ACTO Length = 257 Score = 218 bits (557), Expect = 6e-56, Method: Composition-based stats. Identities = 75/189 (39%), Positives = 101/189 (53%), Gaps = 2/189 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP--IAGLNDSKKLSEKRRLALYEEI 61 VAG DE GRG G +V AA +L R + GL DSK L+ R +YEE+ Sbjct: 35 LHRRGFPAVAGADEAGRGACAGPLVAAACVLPAGRRGRVPGLADSKLLTVAARERVYEEV 94 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 ++A++WS+ ++D + + A++RAV L +YVL DG P L P +A Sbjct: 95 VDRAVAWSVVLLPVADLDARGMHVTNIEALRRAVWALDPGADYVLTDGFPVPGLARPTLA 154 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 V KGD ++AAS+LAKVTRD M L +P+Y FA HKGY TA H L +G Sbjct: 155 VWKGDRIAACVAAASVLAKVTRDRIMLDLHERWPEYDFAVHKGYSTAAHDAALQRYGPCP 214 Query: 182 HHRRSFGPV 190 HR+ F V Sbjct: 215 EHRKRFVNV 223 >UniRef50_D0RRM6 Ribonuclease n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RRM6_9RICK Length = 199 Score = 218 bits (557), Expect = 7e-56, Method: Composition-based stats. Identities = 85/190 (44%), Positives = 121/190 (63%), Gaps = 3/190 (1%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 + V GVDEVGRGPL G VV+AAVIL L+DSKKLS+ +R +E +K+K+ + Sbjct: 11 SHFVVGVDEVGRGPLAGPVVSAAVILPLDFDYKCLDDSKKLSKVKREKAFEILKKKS-KF 69 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEY-VLIDGN-RCPKLPMPAMAVVKGD 126 LG AE EID++NIL A++++M+RAV + ++ +L+DG K + +KGD Sbjct: 70 KLGIAEVDEIDKINILQASLISMKRAVDQFDLPKDHKILVDGPWSFDKTNQNIITKIKGD 129 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 ++ P I+AASI+AKV RD M+ L F QY + + GY T HL+ + EHG T HHR+S Sbjct: 130 AKYPSIAAASIIAKVYRDQIMSKLSKNFVQYSWDTNSGYGTQKHLKAIKEHGITVHHRKS 189 Query: 187 FGPVKRALGL 196 F P+ + L L Sbjct: 190 FAPIHKILSL 199 >UniRef50_C7RDQ2 Ribonuclease n=6 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDQ2_ANAPD Length = 209 Score = 218 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 87/183 (47%), Positives = 113/183 (61%), Gaps = 1/183 (0%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 V+ +L+AG+DEVGRGPL G VVT AVI+ I G+ DSKKL+ K+ L+L E+I + Sbjct: 14 VHEDYELIAGIDEVGRGPLAGPVVTCAVIMKRDSNIGGVTDSKKLTRKKMLSLKEKILDD 73 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 A+ ++ G A P IDELNI +AT AM+ A+ L I PE VLID R +P M +VK Sbjct: 74 AIDFAYGYANPSLIDELNIKNATHKAMEDALNKLKIRPEIVLIDAERI-NTDIPQMNIVK 132 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 GD IS ASILAKV RD M ++P Y F + GY T H E L ++G T HR Sbjct: 133 GDLNEYVISCASILAKVRRDDIMINFSKIYPGYSFETNMGYGTKKHYEGLEKYGETPIHR 192 Query: 185 RSF 187 ++F Sbjct: 193 QTF 195 >UniRef50_Q2GD69 Ribonuclease HII n=2 Tax=Neorickettsia RepID=RNH2_NEOSM Length = 195 Score = 218 bits (556), Expect = 8e-56, Method: Composition-based stats. Identities = 93/194 (47%), Positives = 117/194 (60%), Gaps = 6/194 (3%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + L+AGVDEVGRG L G VV AVIL I G DSK LS RL+ YEEI Sbjct: 3 YRKSENGLIAGVDEVGRGCLAGPVVACAVILTENLAIPG--DSKVLSRAVRLSWYEEIIS 60 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL---PMPAM 120 + + ++G + EI+ +NIL+AT+LAM+RA+ L + P VLIDG Sbjct: 61 NSYN-AIGMSSVKEIETMNILNATLLAMERALERLPVVPTTVLIDGRDIINNAAKYKEVK 119 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 +VV GD EI AASI+AKVTRD M LD+ +P Y + +KGY T HLE LA++G T Sbjct: 120 SVVSGDKIYGEIKAASIVAKVTRDRLMEGLDLTYPYYRWKFNKGYGTKEHLEALAKYGVT 179 Query: 181 EHHRRSFGPVKRAL 194 +HHRR F PVKR L Sbjct: 180 DHHRRKFAPVKRML 193 >UniRef50_C7MNC1 Ribonuclease n=2 Tax=Coriobacteriaceae RepID=C7MNC1_CRYCD Length = 262 Score = 218 bits (556), Expect = 8e-56, Method: Composition-based stats. Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 6/198 (3%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 ++ + G+DEVGRGPL G + AAV+L A IA LNDSK+LS RR + + Sbjct: 65 LQAQAADGGVSVGLDEVGRGPLAGPLTVAAVVLPEAPHIAHLNDSKQLSASRREEVAAAV 124 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNRCPKLPMP 118 K+ A++WS+ P +ID+ + A RAVA + +A + VL+DGN + Sbjct: 125 KDVAIAWSVQHIAPEDIDDAGMSACLRRAFGRAVAAVETAGVAIDVVLLDGNPL-HFDVR 183 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 +KGD+R+ I+AAS++AKV RD M +P YGF ++KGY +A H+ + ++G Sbjct: 184 ERTFIKGDARLACIAAASVVAKVERDELMTQAAQTYPVYGFDRNKGYGSAEHIAAIKKYG 243 Query: 179 ATEHHRRSF--GPVKRAL 194 HRRSF V+ +L Sbjct: 244 LCPLHRRSFCHSFVQESL 261 >UniRef50_C6XGP6 Ribonuclease n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGP6_LIBAP Length = 209 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 88/183 (48%), Positives = 109/183 (59%), Gaps = 2/183 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAG+DEVGRG L G VV AA+ILDP G+NDSKK+S K+R LYE+I A+ Sbjct: 26 VAGIDEVGRGALAGPVVVAAIILDPNNIPFGINDSKKISHKKREELYEKITSSAIISI-S 84 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP-KLPMPAMAVVKGDSRVP 130 A ID+ NI AT+ A+ AV L + P LIDG P LP A AV+KGDS Sbjct: 85 SASHQYIDKHNIHKATLDAIYHAVENLQVIPRSALIDGRSIPEDLPCQAFAVIKGDSISL 144 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 I+AASI+AKVTRD M +P YGF H GYPTA H + + E G + HR +F P+ Sbjct: 145 SIAAASIIAKVTRDRLMRIAHKKYPDYGFDSHVGYPTAKHQQVIKEKGPSCIHRLTFRPL 204 Query: 191 KRA 193 + Sbjct: 205 RNL 207 >UniRef50_B9ZNV1 Ribonuclease n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNV1_9GAMM Length = 226 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 112/186 (60%), Positives = 131/186 (70%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 VAGVDEVGRGPL G VV AAVIL + GL DSKKLS RR AL EI+E+A++W+L Sbjct: 35 WVAGVDEVGRGPLAGPVVAAAVILPESFAAPGLTDSKKLSAGRRQALDVEIRERAVAWAL 94 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 GRAE EID LNI AT+LAMQRAVA L AP+++L+DG P+ P A A+V GD V Sbjct: 95 GRAEAAEIDALNIHRATLLAMQRAVAALSQAPDHLLVDGRFTPEGPWSAEAIVGGDGSVA 154 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ISAAS++AKV RDAEM AL +P YGF +H GYPTA+H + LA G HRRSFGPV Sbjct: 155 AISAASVIAKVARDAEMTALHERYPDYGFDRHAGYPTAYHRDALARLGPCVEHRRSFGPV 214 Query: 191 KRALGL 196 RAL Sbjct: 215 ARALAA 220 >UniRef50_Q5SLU5 Ribonuclease HII n=8 Tax=Deinococci RepID=RNH2_THET8 Length = 203 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 85/189 (44%), Positives = 114/189 (60%), Gaps = 3/189 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 + LVAG+DE GRG G +V AV+L P DSK LS K R L E++KE Sbjct: 10 FWRKGLLVAGLDEAGRGAWAGPIVVGAVVLPPGEYP--FRDSKLLSPKARERLAEKVKEV 67 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVK 124 AL+++LG AE E+D L +L AT+LA +RA+ L +APE ++ D P+P ++ K Sbjct: 68 ALAFALGVAEAAEVDRLGVLKATLLAAERALLSLPLAPEALVTD-YLPLPTPLPLLSPPK 126 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 D + P ++AASILAKV RD M LD ++P YGFA+HKGY T H E L G + HR Sbjct: 127 ADEKSPTVAAASILAKVHRDRIMDELDRLYPGYGFARHKGYGTQEHQEALLALGPSPVHR 186 Query: 185 RSFGPVKRA 193 + F PV +A Sbjct: 187 KRFAPVAQA 195 >UniRef50_Q11KH2 Ribonuclease HII n=47 Tax=Alphaproteobacteria RepID=RNH2_MESSB Length = 253 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 90/192 (46%), Positives = 112/192 (58%), Gaps = 2/192 (1%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + + VAG+DE GRGPL G VV AAV+LDP R GL+DSK+L+ + R L +EI Sbjct: 25 KIMREGLAPVAGLDEAGRGPLAGPVVAAAVVLDPDRIPEGLDDSKRLTAEARERLVQEIF 84 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMA 121 E A + S+ IDE NIL A++ AM+RA+ GL + P Y L DG P LP P A Sbjct: 85 EVAAAVSVASLCAASIDESNILKASLEAMRRALDGLCVRPAYALADGRDIPPGLPCPCRA 144 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA-T 180 VVKGD R I+AAS++AKV RD M + P YGF H GY T H E + +G T Sbjct: 145 VVKGDQRSQSIAAASMVAKVVRDRMMVRTGTLMPHYGFHSHVGYATERHREAITAYGPVT 204 Query: 181 EHHRRSFGPVKR 192 HR SF P K Sbjct: 205 RLHRMSFSPFKT 216 >UniRef50_D1CBL6 Ribonuclease n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBL6_THET1 Length = 219 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 101/198 (51%), Gaps = 6/198 (3%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG-----LNDSKKLSEKRRLALY 58 VAG+DE GRG G V A V+L P + DSK LS RR Y Sbjct: 20 LWRQGYAYVAGLDEAGRGAWAGPVFGAVVVLPPDLSTLESLAEVVRDSKVLSPNRRELAY 79 Query: 59 EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP 118 E IK AL +G + P EID L I AT LA RA+ P+ +LID + + Sbjct: 80 EAIKASALYIGIGASTPDEIDTLGISRATELAWLRALRD-ADLPDVLLIDAFKIRACSIN 138 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 +A+V GD+ I+AAS++AKV RD MA L P + F +HKGY T H ++A +G Sbjct: 139 QVAIVDGDALCLSIAAASVVAKVLRDRYMADLTEYVPGFSFHKHKGYGTREHQAEIAIYG 198 Query: 179 ATEHHRRSFGPVKRALGL 196 T HRRSF P+ LG Sbjct: 199 VTPQHRRSFAPISTVLGA 216 >UniRef50_D1BMP6 Ribonuclease n=3 Tax=Veillonella RepID=D1BMP6_VEIPT Length = 265 Score = 216 bits (551), Expect = 3e-55, Method: Composition-based stats. Identities = 93/191 (48%), Positives = 120/191 (62%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 F VAGVDEVGRGP+ G V AAVIL P I GLNDSKKL+E++R ALY+ I + Sbjct: 69 FYDQGIYHVAGVDEVGRGPIAGPVTVAAVILPPMTLIPGLNDSKKLTEEKREALYDIIMD 128 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 +A++ S P +IDELNI T AM A+ L + E V+ D + P L +P +++ Sbjct: 129 EAVAVSCISYGPEKIDELNIYEVTRQAMYEAIRTLSVPAEAVVADAMKLPDLTIPVESII 188 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 KGDS+ I+AASI+AKVTRD M +LD FP YGF HKGY T H E + + G T H Sbjct: 189 KGDSKSANIAAASIIAKVTRDRYMKSLDDEFPGYGFGIHKGYYTELHKEAIEQQGVTPLH 248 Query: 184 RRSFGPVKRAL 194 R+SF P+K + Sbjct: 249 RKSFEPIKSIV 259 >UniRef50_A0QV44 Ribonuclease HII n=27 Tax=Actinomycetales RepID=RNH2_MYCS2 Length = 272 Score = 216 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 85/196 (43%), Positives = 112/196 (57%), Gaps = 2/196 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG--LNDSKKLSEKRRLALYEEI 61 VAGVDEVGRG G +V AA +L P R + L+DSKKL EK R L+ I Sbjct: 24 LYRNGLGPVAGVDEVGRGACAGPLVVAACVLGPNRLESLAALDDSKKLGEKERERLFPLI 83 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 + AL++ + HE+D + A + M+RAVAGL + P YVL DG R P L +P++ Sbjct: 84 RRYALAYHVVFIPSHEVDRRGVHVANIEGMRRAVAGLSVRPGYVLSDGFRVPGLSVPSLP 143 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 V+ GD+ I+AAS+LAKV+RD M ++ P YGFA+HKGY T H L HG Sbjct: 144 VIGGDAAAACIAAASVLAKVSRDRLMVEMEEQHPGYGFAEHKGYITPAHTAALTRHGPCV 203 Query: 182 HHRRSFGPVKRALGLA 197 HR S+ V+RA Sbjct: 204 EHRYSYVNVRRAAEAT 219 >UniRef50_A5PBF7 Ribonuclease n=2 Tax=Erythrobacter RepID=A5PBF7_9SPHN Length = 211 Score = 215 bits (549), Expect = 5e-55, Method: Composition-based stats. Identities = 92/196 (46%), Positives = 108/196 (55%), Gaps = 11/196 (5%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 L+ GVDE GRGPL G VV AAV+L GL+DSKKLS +R L +I+ + Sbjct: 11 RDAPLIVGVDEAGRGPLAGPVVAAAVVLCKPC-PGGLDDSKKLSAAKRSKLEPQIQRR-C 68 Query: 67 SWSLGRAEPHEIDELNILHATMLAM----QRAVAGLHIAPEYVLIDGNRCPK-----LPM 117 +W L EP ID LNI ATMLAM QR + L P VLIDGN P Sbjct: 69 AWGLAVVEPEVIDRLNIFGATMLAMTLATQRCIEALGAEPAEVLIDGNMTPHGRREEWRW 128 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 PA A+V GD + ISAASILAK RD M P YG+ +KGY + H+E L H Sbjct: 129 PARAIVGGDGKEACISAASILAKEYRDRIMVEAAKAHPHYGWENNKGYGSKSHMEALRLH 188 Query: 178 GATEHHRRSFGPVKRA 193 G T HRRSF PV +A Sbjct: 189 GPTPLHRRSFAPVAQA 204 >UniRef50_B6BS88 Ribonuclease n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BS88_9RICK Length = 190 Score = 215 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 79/185 (42%), Positives = 118/185 (63%), Gaps = 2/185 (1%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 +++AGVDEVGRG L+G V AAVIL+ L DSK +S+ +R L IK+ ++ W Sbjct: 2 KIIAGVDEVGRGSLIGPVYAAAVILNKNIDKKLLKDSKTISKIKRELLSNYIKKNSI-WV 60 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL-PMPAMAVVKGDSR 128 +G+A EID++NIL A++LAM+RA+ L P +LIDGN+ P + A++KGD + Sbjct: 61 IGKASVKEIDKINILQASLLAMKRAIKKLKKKPTQILIDGNKVPDIKNYNLKAIIKGDKK 120 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +P ISAASI+AKV RD + +L Y + Q+ GY T HL+ + + G ++HHR++F Sbjct: 121 IPSISAASIIAKVARDKFITSLAKTNKGYHWDQNFGYGTKQHLKAIKKLGISKHHRKTFS 180 Query: 189 PVKRA 193 P+ Sbjct: 181 PINNY 185 >UniRef50_B7IF45 Ribonuclease HII n=3 Tax=Thermotogaceae RepID=RNH2_THEAB Length = 220 Score = 215 bits (548), Expect = 7e-55, Method: Composition-based stats. Identities = 89/190 (46%), Positives = 115/190 (60%), Gaps = 6/190 (3%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 +VAGVDE GRGPL G VV AAVIL+ I GL+DSKKL+ ++R L+ EI +K+ +++ Sbjct: 2 IVAGVDEAGRGPLFGPVVAAAVILNEE--IDGLDDSKKLTSRKREKLFLEIIKKSY-FAI 58 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAP--EYVLIDGNRCPKLPMPAMAVVKGDSR 128 A EID+ NILHAT +AM RA+ L + +DG L P +VKGDS Sbjct: 59 SIATADEIDKFNILHATEIAMDRALERLRKKINFDIAFVDGKNL-NLKFPFKCIVKGDSL 117 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 V EISAASILAKV RD + + F Y +HKGYPT HL+ + EHG T HR ++ Sbjct: 118 VKEISAASILAKVVRDRIIVSYAKKFSSYMLEKHKGYPTQLHLKLIKEHGLTPLHRLTYK 177 Query: 189 PVKRALGLAS 198 PV L + Sbjct: 178 PVMELLSITQ 187 >UniRef50_A8RBU7 Ribonuclease n=4 Tax=Erysipelotrichaceae RepID=A8RBU7_9FIRM Length = 208 Score = 215 bits (548), Expect = 7e-55, Method: Composition-based stats. Identities = 80/191 (41%), Positives = 109/191 (57%), Gaps = 2/191 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + Q + G+DE GRGP+ G +V AAV + DSKKLSEK+R L+ +I + Sbjct: 11 WYKEGKQAIVGIDEAGRGPIAGPLVVAAVSFPDDYDDDEIYDSKKLSEKKRELLFRKIIK 70 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 +A + + + ID NI AT AMQR + + VL D P +++V Sbjct: 71 EAREYHILIVDTKTIDTENIYRATQNAMQRLCDEFQMI-DGVLTDAMPLPFCKQDCISLV 129 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE-H 182 KGD + I+AASILAKVTRD M A D+ +PQYGFA+HKGYPT HLE L +G + Sbjct: 130 KGDQKSVSIAAASILAKVTRDHIMMAYDLQYPQYGFAKHKGYPTKVHLEALHRYGVIDGL 189 Query: 183 HRRSFGPVKRA 193 +R S+GPV + Sbjct: 190 YRHSYGPVAKM 200 >UniRef50_Q8RDX3 Ribonuclease HII n=12 Tax=Fusobacterium RepID=RNH2_FUSNN Length = 215 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 118/204 (57%), Gaps = 10/204 (4%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP-ARPIAGLNDSKKLSEKRRLALYEE 60 + + V GVDE GRGPL G VV AAVIL + +NDSKKL+EK+R LY+ Sbjct: 11 LYLYDLEYKNVIGVDEAGRGPLAGPVVAAAVILKEYTEELDEINDSKKLTEKKREKLYDI 70 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH----IAPEYVLIDGN-RCPKL 115 I + ++G + EID+LNIL+A LAM+RA+ L VL+DGN + + Sbjct: 71 IMKN-FDVAVGISTVEEIDKLNILNADFLAMRRALKDLKSLKNEKEYTVLVDGNLKIKEY 129 Query: 116 PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLA 175 + +VKGD++ I+AASI+AKVTRD M L ++P Y F +HKGY T H+E + Sbjct: 130 IGKQLPIVKGDAKSLSIAAASIIAKVTRDRLMKDLANIYPDYSFEKHKGYGTKTHIEAIK 189 Query: 176 EHGATE-HHRRSFGPVKRALGLAS 198 + GA E HR+ F +++ L Sbjct: 190 DKGAIEGVHRKVF--LRKILETEE 211 >UniRef50_C0E2A8 Ribonuclease n=2 Tax=Corynebacterium matruchotii RepID=C0E2A8_9CORY Length = 236 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 76/192 (39%), Positives = 102/192 (53%), Gaps = 2/192 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA--RPIAGLNDSKKLSEKRRLALYEEI 61 VAGVDE GRG G + AA IL ++ L DSKKLS R AL+ I Sbjct: 14 LHQAGLGPVAGVDEAGRGACAGPITIAACILPSQPLAALSRLTDSKKLSAATRAALFPLI 73 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 + A++WS+ +ID+ I HA + M+RAVA L + P YVL D + + Sbjct: 74 QHHAVAWSILHISAADIDQYGIQHANVFGMRRAVALLDVQPGYVLTDALKVDGFACSYLP 133 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++ GD+ ISAAS+LAK RD MA L +P+Y FA HKGY T H+ + +GA+ Sbjct: 134 IIGGDAAARCISAASVLAKHARDLVMAELAETYPRYEFASHKGYGTKVHMTAVRRYGASP 193 Query: 182 HHRRSFGPVKRA 193 HR S+ V A Sbjct: 194 VHRYSYANVAAA 205 >UniRef50_D2RIH6 Ribonuclease H n=2 Tax=Acidaminococcus RepID=D2RIH6_ACIFE Length = 270 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 88/190 (46%), Positives = 113/190 (59%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 F VAG DE GRGPL G +VTAAVIL + + GLNDSKK++ RR LY EI E Sbjct: 65 FWARGMDQVAGCDEAGRGPLAGPLVTAAVILPHSIWLPGLNDSKKVTAARREILYGEILE 124 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 +A+S ++ P EID LNI A AM + L + P+ + D M +V Sbjct: 125 QAVSVTVSILGPREIDRLNIYQAAKTAMTLCLTHLKVRPQAAVTDAMPLEIPGMEVEDLV 184 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GDSR ++AASI+AKVTRD M +D +PQYGFA+HKGY TA H++ + + G T H Sbjct: 185 HGDSRSAAVAAASIIAKVTRDHLMEDMDRQYPQYGFAKHKGYGTARHIQAILDCGPTPWH 244 Query: 184 RRSFGPVKRA 193 RRSF P+K Sbjct: 245 RRSFEPLKSM 254 >UniRef50_B0JV09 Ribonuclease HII n=3 Tax=Chroococcales RepID=RNH2_MICAN Length = 208 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 83/192 (43%), Positives = 112/192 (58%), Gaps = 6/192 (3%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPA----RPIAGLNDSKKLSEKRRLALYEEIKEK 64 L+AGVDEVGRG L G VV A V+ P+ G+ DSK+LS ++R L +I+ Sbjct: 4 EPLIAGVDEVGRGALFGPVVAAVVVTVPSGFARLWELGVKDSKQLSPQKRQKLSRQIQRD 63 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMAVV 123 + +G A EID LNI HA++LAM RA+ L ++P +DG L +P AV+ Sbjct: 64 FVC-RIGYATVKEIDRLNIFHASLLAMSRAIGKLPLSPSLCWVDGKHIIKDLSIPQKAVI 122 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 +GD + P I+AASI+AKV RD + +P YG A+HKGY TA HLE + +G T H Sbjct: 123 QGDQQSPVIAAASIVAKVWRDDLITRWHRRYPDYGLARHKGYGTAQHLEAIGNYGLTSQH 182 Query: 184 RRSFGPVKRALG 195 R SF P + L Sbjct: 183 RLSFSPCQPRLE 194 >UniRef50_C9RN38 Ribonuclease n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RN38_FIBSS Length = 247 Score = 213 bits (543), Expect = 2e-54, Method: Composition-based stats. Identities = 84/223 (37%), Positives = 119/223 (53%), Gaps = 34/223 (15%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 + +F ++ +V G+DEVGRGPL G VV A +L + LNDSKKLS +R A+++ Sbjct: 22 LRKFAAENSAIVVGIDEVGRGPLAGPVVACAAVLKSPDALLTLNDSKKLSRPKREAMFDA 81 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH--------------------- 99 +K+ +++ A EIDE+NIL A LAM+RA+ L Sbjct: 82 VKDACACYAIASASVEEIDEINILEADFLAMRRALQALGFPGLNESAPEIPIEVKGSLND 141 Query: 100 IAPEYV-----------LIDGN-RCPKLPMP-AMAVVKGDSRVPEISAASILAKVTRDAE 146 + P+ V +DGN + +P M +VKGD R+ ISAASILAKV RD Sbjct: 142 VMPDSVPASALSSNVLIAVDGNLKIRGVPAENQMPIVKGDGRIASISAASILAKVFRDRY 201 Query: 147 MAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGP 189 M L+ ++P YGF +H GY T HL+ + G + HR+SF P Sbjct: 202 MDKLEELYPGYGFDKHAGYGTKAHLDAIRRQGFSPAHRKSFHP 244 >UniRef50_D0L036 Ribonuclease n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L036_HALNC Length = 216 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 136/211 (64%), Gaps = 14/211 (6%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 + E P + AGVDE GRGPL G VV AA++L P PI G+NDSKKL+E++R+ L++E Sbjct: 6 LFEMQTPGL-IYAGVDEAGRGPLAGPVVAAAIVLYPDDPIVGVNDSKKLTERQRVKLFDE 64 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE-------YVLIDGNRCP 113 I +A S+++ A HEID +NIL A++LAM+RAV ++ + + +DGNRCP Sbjct: 65 ITRRAQSFAIAEATVHEIDTINILQASLLAMRRAVMAVYDQMKTQGQTLGRIHVDGNRCP 124 Query: 114 KLP------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPT 167 L M A++ GD+R I++ASILAKVTRD M +D ++PQY FA+HKGYPT Sbjct: 125 DLNDPDAGFMECHALIGGDARDAAIASASILAKVTRDRLMLDMDKLYPQYEFAKHKGYPT 184 Query: 168 AFHLEKLAEHGATEHHRRSFGPVKRALGLAS 198 A H + L E GA HR SF PV+ L ++ Sbjct: 185 ARHRDLLIEFGACPEHRSSFAPVRAILSQSN 215 >UniRef50_Q7U4C6 Ribonuclease HII n=18 Tax=Cyanobacteria RepID=RNH2_SYNPX Length = 224 Score = 213 bits (542), Expect = 3e-54, Method: Composition-based stats. Identities = 85/189 (44%), Positives = 106/189 (56%), Gaps = 7/189 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 VAGVDEVGRG L G V AV+L+ GL DSK+LS +RR L I+ +A + Sbjct: 38 VAGVDEVGRGCLFGPVFAGAVVLEAANASRLQQEGLTDSKRLSARRRGDLVPLIEHEAEA 97 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN-RCPKLPMPAMAVVKGD 126 W LG++ EID L I AT LAM RA+ L PE VL+DGN ++V GD Sbjct: 98 WGLGQSSTREIDRLGIRPATELAMLRALQRLPNRPELVLVDGNLPLRPWTGEQRSIVAGD 157 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 I+AAS++AK RDA M L FP YG +H GY TA H L + G + HRRS Sbjct: 158 QHSLAIAAASVIAKQCRDALMQRLSQRFPGYGLERHAGYGTALHRAALLDLGPSALHRRS 217 Query: 187 FGPVKRALG 195 F ++R LG Sbjct: 218 F--LRRFLG 224 >UniRef50_A5WDY2 Ribonuclease HII n=1 Tax=Psychrobacter sp. PRwf-1 RepID=RNH2_PSYWF Length = 302 Score = 213 bits (542), Expect = 4e-54, Method: Composition-based stats. Identities = 91/248 (36%), Positives = 120/248 (48%), Gaps = 55/248 (22%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP------------ARPIAGLNDSKKLS 50 + + GVDEVGRGPL G+VV AA IL P+A L DSKKL+ Sbjct: 46 QSQSGGFEFEIGVDEVGRGPLYGSVVVAAAILPKAWSGETEVGLLQDTPLAILTDSKKLT 105 Query: 51 EKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYV----- 105 E++R L+E +K+ AL++ + IDE+NIL AT+L M+ A L + V Sbjct: 106 ERKREKLFEPVKQHALAYLVVEVPAGVIDEINILQATILGMRVACEQLMVEITKVWRDAS 165 Query: 106 --------------LIDGNRCPKL------------------------PMPAMAVVKGDS 127 LIDGN+ P L A A VKGD+ Sbjct: 166 ELPTAPSTPLGFKLLIDGNKVPDLDEARLATHGICLADMTVTQPAGMVKFCAEAWVKGDA 225 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 R I+AAS+LAKV RD ++ A +P YG HKGYPT H+E +A G HRRSF Sbjct: 226 RHNAIAAASVLAKVYRDRQLIADGARYPGYGLEGHKGYPTKAHVEAIARLGVLPEHRRSF 285 Query: 188 GPVKRALG 195 PV++A+ Sbjct: 286 KPVQQAIE 293 >UniRef50_Q73MG1 Ribonuclease HII n=1 Tax=Treponema denticola RepID=RNH2_TREDE Length = 198 Score = 213 bits (542), Expect = 4e-54, Method: Composition-based stats. Identities = 81/199 (40%), Positives = 114/199 (57%), Gaps = 17/199 (8%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK-ALSWS 69 ++ G+DE GRGPL G V AAVIL + + L DSKKL+EK+R + + I + W+ Sbjct: 1 MLCGIDEAGRGPLAGPVTAAAVILPSSFDFSILKDSKKLTEKKREEVRKTIYADPNVIWA 60 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEY-------------VLIDGNRCPKLP 116 +G A +EIDE+NIL AT LAM+RA GL++ + +++DGN P + Sbjct: 61 IGWASNYEIDEINILQATFLAMERAYEGLYLKLQEFCKLNNDKFIEPDIIVDGNFIPNIK 120 Query: 117 M--PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKL 174 A+VK D V E+ AASILAK RD M ++P+YG+ +HKGY T H+E + Sbjct: 121 NCSSIKALVKADDSVYEVMAASILAKTARDRMMIRYSWIYPEYGYEKHKGYGTKKHIEAI 180 Query: 175 AEHGATEHHRRSFGPVKRA 193 +G + RRSF VK Sbjct: 181 RFNGYSPIQRRSF-FVKNL 198 >UniRef50_D1N706 Ribonuclease n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N706_9BACT Length = 223 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 112/195 (57%), Gaps = 2/195 (1%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 E VAGVDEVGRGPL G VV AAV+ P G+ DSK+L R L EI Sbjct: 20 CECWQEGFCFVAGVDEVGRGPLAGPVVAAAVVFPRGVPWPGVYDSKQLKAADRERLDREI 79 Query: 62 KEK-ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 + + +G EID +NIL+AT AM+ AV +++L+DG LP P+ Sbjct: 80 RSVPGVRIGIGEVPVEEIDRINILNATHRAMREAVLAAG-EVDFILVDGRPVKNLPCPSR 138 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 A+VKGDSR I+AASI+AKV RD M LD+ +P YGF +HKGY TA HLE L G Sbjct: 139 ALVKGDSRSASIAAASIVAKVYRDRLMDELDLRWPGYGFKEHKGYGTAAHLESLRRLGPC 198 Query: 181 EHHRRSFGPVKRALG 195 HR+SF PV+ + Sbjct: 199 PAHRKSFRPVREIID 213 >UniRef50_Q313K1 Ribonuclease HII n=7 Tax=Desulfovibrio RepID=RNH2_DESDG Length = 263 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 93/209 (44%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 14 GVDEVGRGPLVGAVVTAAVILDPARP---------IAGLNDSKKLSEKRRLALYEEIKEK 64 G+DE GRG L G VV AAVIL PA ++GL DSKKLSEKRRL L IK Sbjct: 43 GIDEAGRGCLAGPVVAAAVILPPAGAPAAPHIAAALSGLTDSKKLSEKRRLTLEPAIKSC 102 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL-----------HIAPEYVLIDGNRCP 113 A+ W +G P ID +NIL AT AM AV L + P ++ +DG++ Sbjct: 103 AVRWGVGVVWPQVIDRINILQATYRAMSLAVRHLRGGGAAASMPAGLPPVFLAVDGDKTI 162 Query: 114 ---------KLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKG 164 L +P A+V GD V ISAAS+LAK RD M ALD + YGFA HKG Sbjct: 163 PGQVLQAVTGLSVPQEAIVGGDGCVMAISAASVLAKTFRDRLMTALDKRYSGYGFATHKG 222 Query: 165 YPTAFHLEKLAEHGATEHHRRSFGPVKRA 193 Y TA H+E + G HR SF VK A Sbjct: 223 YGTAAHIEAIRRLGPCRMHRLSFAKVKPA 251 >UniRef50_C2C194 Ribonuclease n=1 Tax=Listeria grayi DSM 20601 RepID=C2C194_LISGR Length = 259 Score = 211 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 84/191 (43%), Positives = 117/191 (61%), Gaps = 1/191 (0%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 E++ +AGVDEVGRGPL G VV AAVIL + G+NDSK+LSE++R Y+ I+ Sbjct: 65 EYLKAGYSRIAGVDEVGRGPLAGPVVAAAVILPNDFSVTGINDSKQLSEEKRQYYYDIIR 124 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E+A+S + ID++NI AT LAM A+ L AP++ LID + +A+ Sbjct: 125 EQAVSIGISIQSHEVIDQVNIYEATKLAMAEALDNLDPAPDFTLIDAMKL-GYSKQELAI 183 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD++ I+AASI+AKVTRD+ M + ++P Y FA + GY T HL L + G Sbjct: 184 IKGDTKSISIAAASIIAKVTRDSLMKEAEQLYPGYDFAHNMGYGTKLHLAGLDQQGVCPI 243 Query: 183 HRRSFGPVKRA 193 HR +F PVK A Sbjct: 244 HRLTFAPVKAA 254 >UniRef50_A5CDI4 Ribonuclease HII n=17 Tax=Rickettsieae RepID=RNH2_ORITB Length = 205 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 81/181 (44%), Positives = 112/181 (61%), Gaps = 2/181 (1%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSW 68 +++VAGVDE GRGPL G VV AAV+++ + I + DSK LS+ +R + Y++I + + Sbjct: 13 SEIVAGVDEAGRGPLAGPVVAAAVVVNQSIMIDDIKDSKVLSKSKRESCYDKI-TNSYYY 71 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSR 128 S+G A EID+ NIL AT LA RAV L I P VL+DGN +++V+GD Sbjct: 72 SIGIASVQEIDKYNILEATKLACIRAVKNLAIIPTKVLVDGNMNF-TDNRFISIVRGDQI 130 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 IS+ASI+AKVTRD M L +P YG+ Q+ GY T H++ + +G T HHR SF Sbjct: 131 CYSISSASIVAKVTRDRIMQILHKEYPVYGWNQNCGYGTKLHIDAIKTYGQTIHHRVSFK 190 Query: 189 P 189 Sbjct: 191 F 191 >UniRef50_C6HV29 Ribonuclease n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HV29_9BACT Length = 195 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 81/195 (41%), Positives = 102/195 (52%), Gaps = 11/195 (5%) Query: 13 AGVDEVGRGPLVGAVVTAAVILD---PARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 GVDEVGRGPL G VV A V G+ DSK LS RR L I +A S Sbjct: 1 MGVDEVGRGPLAGPVVAACVFFSAPVSRLSRLGIADSKSLSSDRRDELSRLIHTEADHVS 60 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE-----YVLIDGN-RCPKLPMPAMAVV 123 LG + E++ELN+ AT LAM RA+ L V +DG + P + + VV Sbjct: 61 LGWSSVDEVNELNVRQATFLAMNRALQQLPPFLMRDSRLCVAVDGRDKIPGVEIQQRTVV 120 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD V ++AASI+AKV RD+ M LD +FP YGFA+HKGY T H + G + HH Sbjct: 121 GGDRTVLSVAAASIVAKVARDSYMEKLDALFPGYGFAKHKGYGTEEHRNAILRLGLSPHH 180 Query: 184 RRSFGPVKRALGLAS 198 R F ++ L A Sbjct: 181 RPLF--CRKLLTQAK 193 >UniRef50_Q4FT93 Ribonuclease HII n=2 Tax=Psychrobacter RepID=RNH2_PSYA2 Length = 287 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 91/228 (39%), Positives = 121/228 (53%), Gaps = 40/228 (17%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILD------------PARPIAGLNDSKKLSEKRRL 55 + L GVDE GRGPL+G+V A+ IL P++ L DSK+LSEK+R Sbjct: 59 GSALQIGVDEAGRGPLLGSVNVASAILPRAWSGLIEAQLLKDTPLSILTDSKQLSEKKRD 118 Query: 56 ALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVA---------------GLHI 100 LY +++ A+ + + ID++NIL ATML M+ +H Sbjct: 119 LLYPLVQQYAIGYIIADIPAAVIDQINILQATMLGMRLCTEILLEVIAHHLNDMAQDIHQ 178 Query: 101 APEYVLIDGNRCPKLP-------------MPAMAVVKGDSRVPEISAASILAKVTRDAEM 147 VL DGNRCP+L + A VKGD+R I+AASILAKV+RD M Sbjct: 179 LQTAVLFDGNRCPELNYTSLAQLGIKESMIDCQAWVKGDARHTSIAAASILAKVSRDKTM 238 Query: 148 AALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALG 195 ALD P+YG A+HKGYPT H+E + +G HRRSF PV++AL Sbjct: 239 YALDTEHPEYGIAKHKGYPTRAHMEAIETYGVLSAHRRSFAPVRKALE 286 >UniRef50_A3VNV1 Ribonuclease n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VNV1_9PROT Length = 209 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 79/182 (43%), Positives = 98/182 (53%), Gaps = 3/182 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVIL-DPARPIAGLNDSKKLSEKRRLALYEEIK-EKALSWS 69 + G+DE GRG G VV AAVI D L DSK L E RR L++ + + L Sbjct: 19 ICGIDEAGRGAWAGPVVAAAVICGDVKAYPEDLADSKTLREARREHLFDLLSARQDLRVG 78 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP-AMAVVKGDSR 128 +G A EID + + A LAM RAV L P L+DGN P LP P +VKGD Sbjct: 79 VGVASVAEIDRMGVGKANWLAMARAVKALPSPPLGALVDGNYAPALPCPDIRPIVKGDGS 138 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 I+AASI+AKVTRD M +L P Y ++ +KGYP H L E G + HHR SF Sbjct: 139 CLVIAAASIVAKVTRDRIMRSLCPEHPAYRWSANKGYPAPVHRAALEEIGPSAHHRHSFA 198 Query: 189 PV 190 P+ Sbjct: 199 PI 200 >UniRef50_B0TH73 Ribonuclease n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH73_HELMI Length = 205 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 83/190 (43%), Positives = 107/190 (56%), Gaps = 1/190 (0%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 ++AGVDE GRG L G VV AAVIL + GLNDSKKLS RR AL EIK Sbjct: 12 LRRKGFHVIAGVDEAGRGSLAGPVVAAAVILPLGCMMEGLNDSKKLSPARREALAVEIKR 71 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN-RCPKLPMPAMAV 122 AL+W +G ID + I+ +T AM A+ L P+Y+++DGN + P A+ Sbjct: 72 LALAWGIGIVSSQVIDRIGIVPSTFRAMSLAIDRLGDRPDYLIVDGNQKVPGYEGTQEAL 131 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 + GD+ ++AASILAKV RD M + FP YGF QHKGY T H + E G Sbjct: 132 IDGDALAAPVAAASILAKVVRDGLMKRYSLFFPGYGFEQHKGYGTQAHRSAILEQGTCLL 191 Query: 183 HRRSFGPVKR 192 HR +F ++R Sbjct: 192 HRETFVHLRR 201 >UniRef50_Q6AJE5 Ribonuclease HII n=1 Tax=Desulfotalea psychrophila RepID=RNH2_DESPS Length = 225 Score = 209 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 81/194 (41%), Positives = 114/194 (58%), Gaps = 3/194 (1%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 ++AG DEVGRGPL G V+ AAVIL DSK LS K+R+ L++ + E Sbjct: 26 GYDIIAGTDEVGRGPLAGPVIAAAVILPADCDHHLFQDSKILSHKKRVHLFQLLTEIDAF 85 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNRCPKLPMPAMAVVK 124 +G IDE+NIL A++LAM+ A+ L P ++L+DG + + +A++K Sbjct: 86 IGIGTVSEKIIDEINILQASLLAMKLAIEDLASNCSRPSFLLVDGKFKVPIDLAQVALIK 145 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 G+S+ I+AASI+AKVTRD M L +PQYGF + GYPT H E + E G T +HR Sbjct: 146 GESKSASIAAASIVAKVTRDRYMQDLHSQYPQYGFNTNSGYPTKKHREAIGEFGITCYHR 205 Query: 185 RSFGPVKRALGLAS 198 RSF VK + ++ Sbjct: 206 RSFKGVKEYVDISQ 219 >UniRef50_Q4A278 Putative ribonuclease n=2 Tax=dsDNA viruses, no RNA stage RepID=Q4A278_EHV86 Length = 209 Score = 209 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 8/192 (4%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPI-AGLNDSKKLSEKRRLALYEEIK-EKA 65 +V GVDE GRG L G VV A + PI + DSKK++EK+R+ +E + Sbjct: 18 GDNIVVGVDEAGRGCLAGPVVAGACFVPENEPIHPLIKDSKKMTEKQRMEAFEYLTLNSN 77 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM---PAMAV 122 + EP+EID++NIL+ATM AM + L+DG++ PK+ + Sbjct: 78 IKCYASFIEPYEIDDINILNATMKAMGNVINESGAN--LALVDGDKTPKMFVDTSEIQTF 135 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGDSR+ IS AS++AKV+RD M L +P+YGFA H GY T H+ + ++G Sbjct: 136 IKGDSRMYSISCASVIAKVSRDLYMEELSKTYPEYGFANHMGYGTQAHMAAIEKNGPIPF 195 Query: 183 -HRRSFGPVKRA 193 HR S+ P+K+ Sbjct: 196 VHRYSYAPIKKF 207 >UniRef50_C8PZH5 Ribonuclease n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZH5_9GAMM Length = 240 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 93/226 (41%), Positives = 125/226 (55%), Gaps = 41/226 (18%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDP------------------------ARPIAGLNDS 46 + GVDEVGRGPL+G VV A+I D P++ L DS Sbjct: 5 FIIGVDEVGRGPLLGDVVVCALIFDKAILSIKEDSLSTDLPTADSVSISHNHPLSALTDS 64 Query: 47 KKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAG-----LHIA 101 KKLSEK+R AL+ I++ A + + + ID+LNIL AT+L M++AVAG L Sbjct: 65 KKLSEKKREALFSLIEQTASAHQVVKISASLIDQLNILQATLLGMKQAVAGVMAQMLAQY 124 Query: 102 PEY---VLIDGNRCP---KLPMPAM-----AVVKGDSRVPEISAASILAKVTRDAEMAAL 150 P V++DGN+ P LP A+VKGD + IS AS++AKVTRD +M AL Sbjct: 125 PTATFSVMVDGNKLPVLFDLPNYQQITHEQAIVKGDGKHACISGASVIAKVTRDRDMVAL 184 Query: 151 DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVK-RALG 195 ++P YG QHKGYPTA H++ + +G HR+SF P+K R L Sbjct: 185 SKLYPDYGIEQHKGYPTAAHIQAIEHYGILPMHRKSFAPIKQRILD 230 >UniRef50_A9NF30 Ribonuclease HII n=2 Tax=Bacteria RepID=RNH2_ACHLI Length = 202 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 83/191 (43%), Positives = 108/191 (56%), Gaps = 2/191 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + GVDE GRGPL G VV AAVI + +NDSK LS K+R L+E IK+ Sbjct: 12 LYDKGYTYICGVDEAGRGPLAGPVVAAAVIFEKGFYHEDINDSKTLSAKKRETLFELIKQ 71 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 AL+ + ID++NIL A AM+ A++ L I P+Y L D +P ++ Sbjct: 72 HALAIGVSVVNHEVIDKINILEAARHAMEDAISKLKIKPQYALTDHMDIKG--IPYTSIK 129 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD I+AASI+AKVTRD M D V+PQYGF HKGY T HLE L +G + H Sbjct: 130 HGDQLSISIAAASIIAKVTRDKLMVDYDEVYPQYGFKDHKGYGTRKHLEALNLYGVSPIH 189 Query: 184 RRSFGPVKRAL 194 R++F PV + L Sbjct: 190 RKTFAPVAKLL 200 >UniRef50_A8EVA1 Ribonuclease HII n=4 Tax=Epsilonproteobacteria RepID=RNH2_ARCB4 Length = 192 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 4/177 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGPL G +V A VIL I GLNDSK LSEK+R L++EIKEK+ + + Sbjct: 4 LCGIDEAGRGPLAGPLVVAGVILLED--IVGLNDSKVLSEKKREKLFDEIKEKS-KYHIV 60 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 ++ IDE I ++ + L L+DGN + + +K D++ + Sbjct: 61 FSDAKLIDEKGISFCLKSSILEIIENLKEFSNSFLMDGNTNFGIQILQK-EIKADAKYAQ 119 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +SAASILAKV+RD M + ++P+Y F +HKGY T H+E + E G ++ HR +F Sbjct: 120 VSAASILAKVSRDRFMDEISPLYPKYDFHKHKGYGTKAHIEAIKEFGRSDIHRHTFK 176 >UniRef50_C1SJ31 Ribonuclease n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ31_9BACT Length = 184 Score = 209 bits (532), Expect = 5e-53, Method: Composition-based stats. Identities = 67/177 (37%), Positives = 100/177 (56%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSL 70 L+ G+DEVGRG L G VV AV+L L DSKK+SEK+R + ++ A+++ + Sbjct: 2 LIVGIDEVGRGCLAGPVVAGAVLLPENFSDERLVDSKKISEKKRKIMDGVVRANAIAFGI 61 Query: 71 GRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVP 130 G +ID I+ T AM A+ + ++ + V++D + + +P K + + Sbjct: 62 GAVSNEDIDRYGIVPCTKKAMMLALEQISVSYDKVIVDAVKLEGVKVPLEHPFKAEDKFQ 121 Query: 131 EISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 ++AASI+AKV RDA M L I P YG+ +KGY H+EK+ E G T HRRSF Sbjct: 122 CVAAASIIAKVYRDALMTKLHINHPDYGWYSNKGYGAKVHIEKIKEIGLTPLHRRSF 178 >UniRef50_B2S1N3 Ribonuclease HII n=2 Tax=Borrelia RepID=RNH2_BORHD Length = 181 Score = 208 bits (531), Expect = 7e-53, Method: Composition-based stats. Identities = 75/182 (41%), Positives = 108/182 (59%), Gaps = 3/182 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 ++ G+DEVGRG + G V++AAVI + L+DSKKL + +R L I E + ++ Sbjct: 1 MICGIDEVGRGCIFGPVLSAAVIFKGNPNFLNELDDSKKLKKAKREYLSSLILENSY-YA 59 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP-MPAMAVVKGDSR 128 ID++NI HA++LAMQ A L I + VL+DG PK+ A++KGDS Sbjct: 60 FAEVSNETIDKINIHHASLLAMQIAYEKLDINCDLVLVDGKFIPKIKAKKIQAIIKGDSI 119 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 + EI AASI+AKV RD M + ++P Y ++KGYPT H E + +HG + HRRSF Sbjct: 120 INEIKAASIIAKVQRDKLMDEYNKIYPLYALNKNKGYPTKEHKEAIKKHGISNLHRRSFK 179 Query: 189 PV 190 + Sbjct: 180 FI 181 >UniRef50_A9H3E2 Ribonuclease HII n=10 Tax=Acetobacteraceae RepID=RNH2_GLUDA Length = 224 Score = 208 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 91/191 (47%), Positives = 112/191 (58%), Gaps = 4/191 (2%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILD---PARPIAGLNDSKKLSEKRRLALYEEIKE 63 H VAGVDEVGRGPL G VV AAV+ D P R + L+DSKKL+E RL Y + Sbjct: 9 QHGGRVAGVDEVGRGPLAGPVVAAAVMFDSGVPRRLVTQLDDSKKLTEAARLRAYAALHA 68 Query: 64 -KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 + + ++ A EI LNIL A LAM+RAVA L P+ VL+DGN P PA V Sbjct: 69 ARGVHIAVAAASVSEIARLNILRAAFLAMRRAVARLPHQPDMVLVDGNAAPDFGCPAQCV 128 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 V GD I+AASI+AKV RD MA L +P YG+ ++ GY TA H L G T H Sbjct: 129 VGGDGESLSIAAASIVAKVVRDRLMARLSCRWPGYGWERNAGYGTAEHRAALCRAGTTPH 188 Query: 183 HRRSFGPVKRA 193 HR +FG V++ Sbjct: 189 HREAFGLVRQL 199 >UniRef50_A6WW84 Ribonuclease HII n=4 Tax=Rhizobiales RepID=RNH2_OCHA4 Length = 220 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 83/190 (43%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + + + G+DE GRGPL G VV AAV+LD GL+DSK+L+ +R ALYE I E Sbjct: 26 LLARGLKHIVGIDEAGRGPLAGPVVAAAVVLDIDNLPNGLDDSKRLTAVKREALYETILE 85 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMAV 122 KA++ S+ ID +I A + AM+RA GL + P + LIDG P LP P A+ Sbjct: 86 KAITVSVASLSARSIDASDIRKAALEAMRRASVGLTLQPCHALIDGRDVPPGLPCPGSAL 145 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE- 181 VKGD R I+AASI+AKVTRD M P YG H GY T H + G Sbjct: 146 VKGDQRSVSIAAASIVAKVTRDRMMIRAGAAHPPYGLEIHAGYATVKHRAAIETTGPVPG 205 Query: 182 HHRRSFGPVK 191 HR +F P+K Sbjct: 206 IHRYTFAPIK 215 >UniRef50_A8TXS8 Ribonuclease n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXS8_9PROT Length = 222 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 93/196 (47%), Positives = 112/196 (57%), Gaps = 9/196 (4%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKE 63 LV GVDEVGRGP G VV A +LD P A + DSK LS RR Sbjct: 24 EGALVIGVDEVGRGPWAGPVVAGAAVLDLVAMPTHVAALIADSKALSAPRRADALAAFTP 83 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL----HIAPEYVLIDGNRCPKLPMPA 119 A + +LGRAE EID +NIL A++LAM+RAV L P +L+DGNR P P P+ Sbjct: 84 YA-AIALGRAEVEEIDAVNILQASLLAMRRAVDALLATLAGPPALILVDGNRLPHWPHPS 142 Query: 120 MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA 179 A+VKGD+ IS A+I AK+ RDAEMAAL P YG+ ++ GY T H L G Sbjct: 143 RAIVKGDASCLSISVAAIAAKLARDAEMAALAEQHPGYGWERNAGYGTPEHQVALRRLGP 202 Query: 180 TEHHRRSFGPVKRALG 195 T HHRRSF PV+ A Sbjct: 203 TIHHRRSFAPVRAAFE 218 >UniRef50_D2LBW7 Ribonuclease H n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LBW7_RHOVA Length = 239 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 95/189 (50%), Positives = 117/189 (61%), Gaps = 2/189 (1%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 + + L+AGVDE GRGP G VV AAVI +P AG+NDSKKL+ R L+ +I Sbjct: 43 LALQRKYGGLIAGVDEAGRGPWAGPVVAAAVIF-HGKPPAGVNDSKKLAPAERENLFSKI 101 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 A +G A IDE+NI HAT AM A++ L AP LIDGNRCPKL +P+ A Sbjct: 102 FA-AAHVGIGIAPVELIDEINIYHATHRAMCDAISALAFAPNAALIDGNRCPKLDIPSEA 160 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +V GD+ I+AASI+AKVTRD M L FP Y + ++KGY TA H L E+G T Sbjct: 161 LVSGDALSISIAAASIIAKVTRDRMMTELASTFPPYRWERNKGYGTADHASALREYGVTL 220 Query: 182 HHRRSFGPV 190 HHRRSF PV Sbjct: 221 HHRRSFRPV 229 >UniRef50_B7FYE5 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FYE5_PHATR Length = 189 Score = 206 bits (526), Expect = 2e-52, Method: Composition-based stats. Identities = 92/191 (48%), Positives = 121/191 (63%), Gaps = 11/191 (5%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLS-EKRRLALYEEIKE-KALS 67 Q V GVDE GRGPL G VV AA ++ I G+ DSK L+ E R LYE+I + Sbjct: 1 QYVIGVDEAGRGPLAGPVVAAAAVVPID--IVGIADSKTLTRESVREELYEKIVSSDNVR 58 Query: 68 WSLGRAEPHEIDELNILHATMLAMQ---RAVAGLHIAPE---YVLIDGNRCPK-LPMPAM 120 W++ + IDE+NIL AT+ M+ AVAG+ P+ Y L+DGNR PK + M Sbjct: 59 WAVAVIDSARIDEVNILQATLQGMRLAASAVAGISEVPDNAFYALLDGNRLPKKMAMRVE 118 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 +VKGDSR I+AASILAKVTRD M D ++P+Y AQHKGYPTA H++ + ++GA+ Sbjct: 119 TMVKGDSREYSIAAASILAKVTRDRLMHGYDKLYPEYNLAQHKGYPTAAHMDAVRKYGAS 178 Query: 181 EHHRRSFGPVK 191 HRR+F P+K Sbjct: 179 PIHRRTFAPLK 189 >UniRef50_Q7UZZ2 Ribonuclease HII n=7 Tax=Prochlorococcus marinus RepID=RNH2_PROMP Length = 209 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 7/191 (3%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA----RPIAGLNDSKKLSEKRRLAL 57 ++ + ++ G+DEVGRG + G V + AV+L G+NDSKKL+ K+R Sbjct: 14 LQILNKDSE--IGIDEVGRGSVFGPVFSVAVVLSKKSGLTLKKLGVNDSKKLTPKKRKDF 71 Query: 58 YEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL-P 116 + +I + ++LG++ EID L I HAT L+M RAV L P +LIDG +L Sbjct: 72 FPKIIALSSDYALGQSSVREIDLLGIRHATELSMIRAVKKLKHMPSELLIDGPLTLRLWE 131 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 ++ GDS+ I+ ASI+AKV RD+ M L+ +P Y ++KGY T H L + Sbjct: 132 GNQRNIISGDSKFISIATASIIAKVMRDSLMERLESKYPGYFIFKNKGYGTKQHFSSLKK 191 Query: 177 HGATEHHRRSF 187 HG T HR+SF Sbjct: 192 HGLTNLHRKSF 202 >UniRef50_D1B6E3 Ribonuclease n=2 Tax=Synergistaceae RepID=D1B6E3_THEAS Length = 188 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 88/183 (48%), Positives = 110/183 (60%), Gaps = 5/183 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPAR----PIAGLNDSKKLSEKRRLALYEEIKEKALS 67 VAGVDE GRGPL G VV AA +L + GL DSK LS +RR AL+E I+ + Sbjct: 3 VAGVDEAGRGPLAGPVVAAAAVLTRDQARELMALGLKDSKALSPRRREALFEAIRSLNVQ 62 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDG-NRCPKLPMPAMAVVKGD 126 W A ID ++L A++ AM AV L + P+ VL+DG L +P VVKGD Sbjct: 63 WRAQAASWGRIDRTHVLKASLWAMGMAVMALPVRPQLVLVDGSVPIEGLRIPQRCVVKGD 122 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 S+VP I AAS++AKV RD M ALD ++PQY FA HKGYPT H L++ G + HRRS Sbjct: 123 SKVPSIMAASVIAKVLRDRVMLALDRLYPQYRFASHKGYPTEEHRRILSQLGPSPVHRRS 182 Query: 187 FGP 189 F Sbjct: 183 FSF 185 >UniRef50_B3DVH3 Ribonuclease n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVH3_METI4 Length = 226 Score = 205 bits (523), Expect = 6e-52, Method: Composition-based stats. Identities = 77/187 (41%), Positives = 119/187 (63%), Gaps = 3/187 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALY-EEI 61 + +++AG+DEVGRG + G VV AAVIL P L DSK + EK+R + + Sbjct: 12 LLTKGYRVIAGIDEVGRGAIAGPVVAAAVILPQDLPFHKYLKDSKAVEEKKRKQVVQWLL 71 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDG-NRCPKLPMPAM 120 KE +S+ LG + EI+ +NI + +LAM+RA++ L P+ +L+DG P L +P++ Sbjct: 72 KEGRISFGLGFSFVEEIERINIHGSCLLAMRRAISCLEERPDILLVDGIFSPPHLSIPSL 131 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 +V GD++V I+AAS++AKV+RD M L ++P+YG+ ++KGY TA H E L G + Sbjct: 132 TIVGGDAKVASIAAASLVAKVSRDGWMVKLSSLYPEYGWEKNKGYGTANHFESLRTKGLS 191 Query: 181 EHHRRSF 187 +HR+SF Sbjct: 192 PYHRKSF 198 >UniRef50_A6W7V4 Ribonuclease HII n=5 Tax=Actinomycetales RepID=RNH2_KINRD Length = 262 Score = 205 bits (523), Expect = 6e-52, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 111/212 (52%), Gaps = 26/212 (12%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP--IAGLNDSKKLSEKRRLALYEE 60 +F+ LVAGVDEVGRG L G V +++D A GL DSK L+ R AL + Sbjct: 17 QFLRAGHALVAGVDEVGRGSLAGPVSVGVLVVDAATRTAPTGLRDSKLLTPAAREALAPK 76 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP------- 113 ++ A++ ++G AEP EID + I+ A LA +RA+A L + P+ V++DGN Sbjct: 77 VRRWAVASAVGHAEPGEIDAVGIVAALRLAGRRALAQLPVPPDLVILDGNHDWLSDPREP 136 Query: 114 --------------KLPMP---AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQ 156 LP P VK D ++ AS+LAK TRDA M A FP Sbjct: 137 SLLDALDGLGDPAAGLPCPAPAVTTRVKADVTCAAVAGASVLAKTTRDALMTARHEEFPH 196 Query: 157 YGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 YG+A +KGY HLE LA HGA HRRS+ Sbjct: 197 YGWAGNKGYSAPDHLEALAAHGACPQHRRSWR 228 >UniRef50_Q1IMM1 Ribonuclease HII n=2 Tax=Acidobacteria RepID=RNH2_ACIBL Length = 254 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 81/184 (44%), Positives = 111/184 (60%), Gaps = 1/184 (0%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 +L+AG+DEVGRG L G VV AAVILDP I GL DSK L + R L + I+E + Sbjct: 43 SGAKLIAGIDEVGRGALFGPVVAAAVILDPNYRIKGLRDSKLLPAETREILSKRIREHCI 102 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGD 126 +WS+ + ID+LNI A+ LAM+ AV GL P+++LID + L ++ GD Sbjct: 103 AWSIAAVDVARIDQLNIYWASNLAMKHAVRGLSCQPDHLLIDAMKL-DLDCAQTPIIHGD 161 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 + I+AASI+AKV RDA + +FP+Y A +KGY H++ L E G + HR+S Sbjct: 162 ALSASIAAASIIAKVHRDALIREWAPIFPEYDLASNKGYSAPKHIKALREFGPSPLHRQS 221 Query: 187 FGPV 190 F PV Sbjct: 222 FAPV 225 >UniRef50_C2MC66 Ribonuclease n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MC66_9PORP Length = 204 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 83/190 (43%), Positives = 109/190 (57%), Gaps = 2/190 (1%) Query: 1 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE 60 ++ + G DE GRG L G + AAVI L DSKKL+ K+R L Sbjct: 3 LLHRYASDGLIECGCDEAGRGALAGDLYAAAVIWPDTLDHPHLRDSKKLTAKQREELRHF 62 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP--MP 118 I+E A +W++G A EI ++NILHA+MLAMQRA+ L PE +LIDGN P + Sbjct: 63 IEEHATAWAVGVATVQEIQQINILHASMLAMQRAIEALSCTPERLLIDGNYYDPRPDEVE 122 Query: 119 AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG 178 +VKGD R I+AASILAK RD M + +P YG+ Q+KGYPTA H E + +HG Sbjct: 123 YHTIVKGDDRYLAIAAASILAKTHRDEYMTQQALEYPHYGWEQNKGYPTAQHREGIRQHG 182 Query: 179 ATEHHRRSFG 188 + HR+ F Sbjct: 183 SCPLHRQGFQ 192 >UniRef50_A9BI79 Ribonuclease n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BI79_PETMO Length = 208 Score = 202 bits (515), Expect = 5e-51, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 105/196 (53%), Gaps = 9/196 (4%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGL----NDSKKLSEKRRLALYEEIK 62 + + G+DE GRGPL G V AV+++ + L DSK LS K+R Y +I Sbjct: 11 NKYKKIIGIDEAGRGPLAGPVFVGAVVIESKKEGELLAKIGKDSKSLSPKQRERRYFQIT 70 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNRCPKLPMPA 119 +S + IDE+NI AT LAM + + + + YV+IDG + KL Sbjct: 71 RNFKYYS-NFSTSQLIDEINIFKATELAMIKLLEKIVEENANDYYVIIDG-KFFKLDYNY 128 Query: 120 MAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA 179 +VKGD P I AASI+AK RD M L ++P YGF HKGYPT H+E + ++G Sbjct: 129 DCIVKGDQTSPLIGAASIVAKYERDIYMNQLHELYPNYGFITHKGYPTRKHIESIKKYGI 188 Query: 180 TEHHRRSFGPVKRALG 195 HR++F P+KR + Sbjct: 189 ISEHRKTFNPIKRFIE 204 >UniRef50_C8PH70 Ribonuclease n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PH70_9PROT Length = 187 Score = 201 bits (513), Expect = 9e-51, Method: Composition-based stats. Identities = 70/177 (39%), Positives = 99/177 (55%), Gaps = 4/177 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRG L G + A +L R IAGL DSKKLSEKRR LY I E + + + Sbjct: 5 ICGIDEAGRGCLAGPLCVAGCVL--QREIAGLADSKKLSEKRREELYARIIENS-RYKIV 61 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 ++DE + A+++ +A ++ DGN + +VK D+++ E Sbjct: 62 EISSAQVDEAGLSSCLRSALEQILAYFMGFSGQIIYDGNATFGVRG-LQTLVKADAQIAE 120 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +SAASILAKVTRD M L +PQYGFAQ+KGY + H+ + +G T HR S+ Sbjct: 121 VSAASILAKVTRDRTMNELARRYPQYGFAQNKGYGSRAHIAAIERYGLTPFHRASYK 177 >UniRef50_A0JXT5 Ribonuclease HII n=4 Tax=Micrococcaceae RepID=RNH2_ARTS2 Length = 221 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 22/207 (10%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG--LNDSKKLSEKRRLALYEEI 61 F+ +L+AG+DEVGRG + G V ++D +RP+ + DSK L E R L + Sbjct: 13 FLSSGARLLAGIDEVGRGAIAGPVTVGITVVDLSRPVLLDDVRDSKLLKESDRERLEPLV 72 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRA---VAGLHIAPEYVLIDGNRC------ 112 + +++ ++G A EID L I+ A A RA + + P+ VL+DG+ Sbjct: 73 RNWSVASAVGHASAGEIDALGIIAALRTAGTRAWLQILAAGVTPDVVLLDGSHNWLSPET 132 Query: 113 -----------PKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQ 161 P P +VK D + ++AASILAKV RD M +L +P +G+ + Sbjct: 133 QASLFDDAPAGPGCDAPVHTLVKADMQCLSVAAASILAKVERDRIMRSLHGEYPAFGWDE 192 Query: 162 HKGYPTAFHLEKLAEHGATEHHRRSFG 188 +KGY TA H E L G + +HR S+ Sbjct: 193 NKGYGTASHKEALRAAGPSPYHRVSWQ 219 >UniRef50_A4ECJ3 Ribonuclease n=3 Tax=Collinsella RepID=A4ECJ3_9ACTN Length = 262 Score = 199 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 67/168 (39%), Positives = 94/168 (55%), Gaps = 1/168 (0%) Query: 20 RGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEID 79 RG + G + AV L + G+NDSKKL+ RR L +I E A + P +ID Sbjct: 85 RGSVAGPLTVCAVCLPMEPRVWGINDSKKLTPARRELLSVKIAEVATAIGFCHIAPKDID 144 Query: 80 ELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILA 139 E+ + A A+ AVA + P+ VL+DGN +P VVKGD+++ I+AASI+A Sbjct: 145 EMGMARAIRTAVAGAVADTGLEPDCVLMDGNPLGAVP-NERDVVKGDAKIACIAAASIMA 203 Query: 140 KVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 KVTRD M D +P+Y A+ KGY + H+E + +HG HR SF Sbjct: 204 KVTRDEMMVEYDAEYPEYHLAESKGYASPEHIEAIRKHGLCPLHRVSF 251 >UniRef50_A7I0I5 Ribonuclease HII n=7 Tax=Campylobacter RepID=RNH2_CAMHC Length = 185 Score = 199 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 71/176 (40%), Positives = 99/176 (56%), Gaps = 4/176 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGPL G + A IL+ I GL DSKKLSEKRR LYEEI + + + + Sbjct: 3 ICGIDEAGRGPLAGPLHIAGCILNK--QIEGLKDSKKLSEKRREILYEEIIKNST-YKIV 59 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 + +ID+ + L + V ++ DGN +VK D ++ E Sbjct: 60 KFSAAQIDKFGLSKCLKLGLNELVDFFAPFEVKIIFDGNSKFGAEG-FETMVKADDKIKE 118 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 +SAASILAKV+RD M DI FP Y FA++KGY + H+E + ++G E HR+SF Sbjct: 119 VSAASILAKVSRDRVMRNFDIKFPFYDFAKNKGYGSKAHIEAIQKYGYCEIHRKSF 174 >UniRef50_C0A3Z9 Ribonuclease n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A3Z9_9BACT Length = 278 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 83/225 (36%), Positives = 107/225 (47%), Gaps = 39/225 (17%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDP--------ARPIAGLNDSKKLSEKRRLALYE 59 + GVDE GRG L G VV AAV++ A + +NDSK+LS R AL Sbjct: 42 GHAELIGVDEAGRGALAGPVVAAAVLVRRVFLESRWVAHNASRVNDSKQLSAPERDALAF 101 Query: 60 EI----KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP------------- 102 E E A+ G AE EI++ NIL AT LAM+RA+ +H Sbjct: 102 EFETLAVENAIRVGCGVAEVSEIEQFNILGATKLAMRRALECIHPPEAFQQQVEPDLFST 161 Query: 103 ------------EYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAAL 150 ++IDG P P + +VKGD+R I+ ASI+AKVTRD + L Sbjct: 162 EAELAAWRNRVSCRIIIDGLPLKSFPYPHLGIVKGDARSLCIAMASIIAKVTRDRLLTEL 221 Query: 151 DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALG 195 D P YGFAQHKGY T H E + G HR F +++ L Sbjct: 222 DARHPGYGFAQHKGYGTEEHREAVLRLGPCVQHRGLF--LRKLLA 264 >UniRef50_C7PK08 Ribonuclease n=23 Tax=Bacteria RepID=C7PK08_CHIPD Length = 220 Score = 199 bits (506), Expect = 5e-50, Method: Composition-based stats. Identities = 77/186 (41%), Positives = 106/186 (56%), Gaps = 1/186 (0%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + AG DE GRG L G V AAVIL P LNDSK+L R L E +++ Sbjct: 5 YHQKDIAFEAGCDEAGRGCLAGPVFAAAVILPPKFRNKLLNDSKQLKASDRDKLREVVEK 64 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMAV 122 +A+++++ + EID +NIL A+ AM A+ L P Y+L+DGNR P P + Sbjct: 65 EAIAYAVASVDNLEIDRINILKASFRAMHLALDQLKQQPGYILVDGNRFVPYGKTPHACI 124 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD I+AASILAK RD M L +P +G+ ++KGYPT FH + + HG T + Sbjct: 125 VKGDGIYASIAAASILAKTYRDEYMHKLHQEYPHFGWLENKGYPTLFHRDAIRAHGETPY 184 Query: 183 HRRSFG 188 HR++F Sbjct: 185 HRKTFR 190 >UniRef50_C7MB80 Ribonuclease n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MB80_BRAFD Length = 272 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 106/196 (54%), Gaps = 14/196 (7%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILD-----PARPIAGLNDSKKLSEKRRLALYEEI 61 P +++ GVDEVGRG L G V A ++ A G+ DSKKL+ +RR AL E I Sbjct: 20 PGRRIIVGVDEVGRGALAGPVAVGACAVEVVGGLAAPLPEGVRDSKKLTARRREALVEPI 79 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGN--------RCP 113 L+ ++G A P EIDE+ I+ A A RA+ L +A + +++DG+ P Sbjct: 80 LGSVLAGAVGWASPAEIDEIGIMPALTTAALRALDLLGVAADAIVLDGDVDVLTPALTAP 139 Query: 114 KLPMPAMAV-VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLE 172 P P + + V D ++AASILAKV RDA M LD P+Y +A +KGY + H E Sbjct: 140 GRPTPLVHLQVSADRDCASVAAASILAKVARDARMVELDAEAPEYCWASNKGYGSKPHRE 199 Query: 173 KLAEHGATEHHRRSFG 188 + G HHRRS+ Sbjct: 200 AIDRFGVHAHHRRSWR 215 >UniRef50_Q04SW6 Ribonuclease n=4 Tax=Leptospira RepID=Q04SW6_LEPBJ Length = 223 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 102/205 (49%), Gaps = 20/205 (9%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPA--------RPIAGLNDSKKLSEKRR 54 E+ + + G+DE GRGP G + A V + + GL DSKKLSEK+R Sbjct: 13 EYRFYSESIPCGIDEAGRGPYAGPLSVALVSFSQNTLHQILEGKLLKGLTDSKKLSEKKR 72 Query: 55 LALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQR----AVAGLH-IAPEYVLIDG 109 ALY EI + A P+ ID I A + +++ A+ G+ P +LIDG Sbjct: 73 EALYPEILKIAQISCQTFLSPNYIDREGINRAVLEGIRKCAKMAIRGVSSTLPLQLLIDG 132 Query: 110 NRCPK-------LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQH 162 N + KGD R+ I+AASILAKV+RD M ++ +P Y F +H Sbjct: 133 NYNFNRYPEWNYFKNRSSFYTKGDLRIVSIAAASILAKVSRDRYMTSISKKYPDYRFDRH 192 Query: 163 KGYPTAFHLEKLAEHGATEHHRRSF 187 KGY T H E + +G ++ HRRSF Sbjct: 193 KGYGTKLHEELILRYGLSDIHRRSF 217 >UniRef50_A7IES2 Ribonuclease HII n=10 Tax=Proteobacteria RepID=RNH2_XANP2 Length = 249 Score = 196 bits (498), Expect = 4e-49, Method: Composition-based stats. Identities = 92/189 (48%), Positives = 112/189 (59%), Gaps = 1/189 (0%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 VAG DEVGRGPL G VV AAV+LDPAR GL+DSKKL+ +R +LY EI Sbjct: 46 LYADGRAPVAGADEVGRGPLAGPVVAAAVVLDPARVPQGLDDSKKLTRAKRESLYLEICA 105 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 A ++ A P ID NI AT+ A+ AV GL P ++L+DGN P++ A+V Sbjct: 106 TA-EVAIALAPPERIDRDNIRQATLWALANAVRGLPCRPAFLLVDGNDPPRVDCEVEAIV 164 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD V I+AASI+AKV RD MA + FP YGF +H GY T H L HG HH Sbjct: 165 GGDGLVASIAAASIVAKVVRDRLMAGVGAAFPAYGFERHMGYGTREHGAALKAHGPCLHH 224 Query: 184 RRSFGPVKR 192 RRSF PV+ Sbjct: 225 RRSFAPVRE 233 >UniRef50_Q30TX0 Ribonuclease n=4 Tax=Helicobacteraceae RepID=Q30TX0_SULDN Length = 188 Score = 196 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 71/177 (40%), Positives = 102/177 (57%), Gaps = 6/177 (3%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRGP+ G +V A IL+ + GLNDSKKL+EK+R ALYE I + + S+ + Sbjct: 5 LCGIDEAGRGPIAGDLVVAGCILNSH--VDGLNDSKKLNEKKREALYEIIIKNS-SYHIV 61 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 + EID+ I A+ + L L DGN + ++K D ++PE Sbjct: 62 KFSAKEIDDNGISICMKKALLEIMKNLTCKE--YLFDGNTNFGIN-NLPTMIKADGKIPE 118 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +SAASILAKVT D + +PQY F +HKGY TA H+E + ++G E HR+S+ Sbjct: 119 VSAASILAKVTHDRNIINDAKKYPQYQFQKHKGYGTALHVEMIKKYGYCEIHRKSYK 175 >UniRef50_C7R325 Ribonuclease n=2 Tax=Micrococcineae RepID=C7R325_JONDD Length = 303 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 100/211 (47%), Gaps = 26/211 (12%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA--GLNDSKKLSEKRRLALYEEI 61 +LVAGVDEVGRG L G V ++DP + GL DSK+LS + R L I Sbjct: 79 LFDRGARLVAGVDEVGRGALAGPVAVGVCVVDPTTQLPPVGLTDSKELSHEARALLVPMI 138 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIA---PEYVLIDGNRCP----- 113 + A++ ++G A P EIDE I+ A LA QRA+ + + VL+DG+ Sbjct: 139 QGWAVASAVGLATPEEIDECGIVGALRLAGQRALGEIMQRLGPVDTVLLDGSHNWLSEPV 198 Query: 114 ----------------KLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQY 157 + VK D ++ ASILAK RDA M LD FP Y Sbjct: 199 QDLFDAVTSDQQTIDGYEEPRVVTRVKADLACASVAGASILAKEHRDAIMRELDHDFPHY 258 Query: 158 GFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 G+ +KGY ++ H L G T HHR S+ Sbjct: 259 GWVTNKGYASSGHTYALTTRGPTPHHRMSWR 289 >UniRef50_Q0SPB8 Ribonuclease HII n=18 Tax=Bacteria RepID=RNH2_BORAP Length = 181 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 69/180 (38%), Positives = 106/180 (58%), Gaps = 3/180 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 ++ G+DEVGRG + G +++AAV+ I L+DSKKL++++R L I E + ++ Sbjct: 1 MICGIDEVGRGCIFGPILSAAVVFKKKPNFIKELDDSKKLTKEKREYLSSLILENSY-YA 59 Query: 70 LGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP-MPAMAVVKGDSR 128 G I+++NI +A++LAMQ A L + V IDG PK+ A++KGDS Sbjct: 60 FGEISNITIEKINIHNASLLAMQTAYENLKLNCNLVFIDGKFVPKISAKNVKAIIKGDSI 119 Query: 129 VPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 + EI AASI+AKV RD M D ++P Y ++KGYPT H + ++G HR++F Sbjct: 120 IDEIKAASIIAKVKRDKLMDEYDKIYPLYLLKKNKGYPTKEHKNAIKKYGVLSLHRKNFK 179 >UniRef50_Q67PD4 Ribonuclease HII 1 n=1 Tax=Symbiobacterium thermophilum RepID=RNH21_SYMTH Length = 259 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 78/183 (42%), Positives = 114/183 (62%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK 62 + + +AG+DEVGRGPL G VV AAVIL + G+ ++K+LS++RR+ LY I+ Sbjct: 61 QLWSMGYRHIAGIDEVGRGPLAGPVVAAAVILPGEVELPGIEEAKRLSDRRRMELYRRIR 120 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAV 122 E A++ +G +P IDE +++ AT AM +AVA L + P+Y+LIDG P + P + V Sbjct: 121 EVAVAVGVGLVQPEGIDEASVVVATYKAMMKAVADLPVTPDYLLIDGVHLPNVSQPQVPV 180 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 V G++ I+AA+++AKV RD M +D +P YGFA HKGY T H L +G Sbjct: 181 VGGETLSCSIAAAAVVAKVVRDEYMVEMDAKYPAYGFAHHKGYGTPEHRLALERYGPCPI 240 Query: 183 HRR 185 HR+ Sbjct: 241 HRK 243 >UniRef50_A8SLV4 Ribonuclease n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=A8SLV4_9FIRM Length = 210 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 111/192 (57%), Gaps = 7/192 (3%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 +E +Y L+ GVDEVGRG L G VV+ A+I+ I G+ DSKKLS+K+RLALY++I Sbjct: 7 LENIYKKYNLIIGVDEVGRGCLAGPVVSCAIIMKKDSKIEGVTDSKKLSKKKRLALYDKI 66 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP------EYVLIDGNRCPKL 115 E+ + + +G + +IDE+NI A+ AM+ A++ + ++++ D + + Sbjct: 67 LEECVGYGIGIVDNVKIDEINIKQASRFAMKIAISNIKDLDGNKVSGDFLITDAEKV-DV 125 Query: 116 PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLA 175 +P + ++ GD +S ASI+AK RD+ + +P Y F ++ GY T H + + Sbjct: 126 DIPQINLIHGDELSYVVSCASIIAKEYRDSMFVEYEKKYPNYNFIKNVGYGTKAHYKGID 185 Query: 176 EHGATEHHRRSF 187 E G T HR +F Sbjct: 186 EFGVTPIHRVTF 197 >UniRef50_Q8EUA9 Ribonuclease n=1 Tax=Mycoplasma penetrans RepID=Q8EUA9_MYCPE Length = 218 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 2/196 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKL-SEKRRLALYEEIKE 63 + + + G+DEVGRG + G +V VIL+P + DSK + S + R L I + Sbjct: 23 LREKYKNIIGLDEVGRGCIAGPLVVVGVILNPNFFDDRIKDSKLIKSIELRKELKNLILK 82 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 ++S+ + + +D+L A++ M + GL + L D + L P M +V Sbjct: 83 NSISYQIEVVNSNIVDQLGPKQASVKGMTKIANGLINDYDLCLTDFEKIKDLEKPQMNLV 142 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGA-TEH 182 KGD+ I+ ASI+AK TRD M LD +P Y F H+GY T HL+ + ++G E Sbjct: 143 KGDNTSFTIACASIIAKSTRDDYMEELDNKYPNYLFKNHQGYLTKKHLQLIHQYGPIKEV 202 Query: 183 HRRSFGPVKRALGLAS 198 HR S+ P+K L + Sbjct: 203 HRFSYKPIKLILNKSK 218 >UniRef50_B9L043 Ribonuclease n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L043_THERP Length = 219 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 82/187 (43%), Positives = 112/187 (59%), Gaps = 3/187 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG-LNDSKKLSEKRRLALYEEIK 62 + VAGVDEVGRG L G VV AA I +P+ + L DSK+L++ +R AL + ++ Sbjct: 26 LWQAGNRWVAGVDEVGRGALAGPVVAAACIFEPSTELPDQLRDSKRLTDPQRRALADWVR 85 Query: 63 EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL-PMPAMA 121 + +L W++G A E+D L I+ AT LAM RA+ L ++VL DG + +P A Sbjct: 86 QYSLRWAIGAASHREVDRLGIVRATALAMLRALQRLGP-VDHVLYDGLPLTEFERLPGTA 144 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 VV GD R I+AASILAKV RD MA L + +P YG+ ++ GY T H + E G+T Sbjct: 145 VVHGDMRCASIAAASILAKVIRDDLMARLAVRYPGYGWEENAGYGTPSHRRAIRELGSTP 204 Query: 182 HHRRSFG 188 HRRSF Sbjct: 205 FHRRSFQ 211 >UniRef50_B8HA90 Ribonuclease n=2 Tax=Arthrobacter RepID=B8HA90_ARTCA Length = 260 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 22/207 (10%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA--GLNDSKKLSEKRRLALYEEI 61 F + +AGVDEVGRG L G V ++D R G+ DSK L R L + Sbjct: 38 FKAQGVRFLAGVDEVGRGALAGPVSVGIAVVDLERQKPLAGVRDSKLLRATERERLEPLV 97 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRA---VAGLHIAPEYVLIDGNRCP----- 113 + +++ ++G A HEID L I+ A LA RA + + P+ VL+DG+ Sbjct: 98 RRWSVASAVGHASAHEIDALGIIAALRLAGTRAWQDILAAGVIPDMVLLDGSHNWLSPAE 157 Query: 114 ------------KLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQ 161 P VK D + ++AAS++AKV RD M L +P +G+ Sbjct: 158 QLSLFDQEAPEAACDAPVHTKVKADMQCLSVAAASVIAKVERDRTMRELHAEYPDFGWDI 217 Query: 162 HKGYPTAFHLEKLAEHGATEHHRRSFG 188 + GY T H + L G T +HR S+ Sbjct: 218 NNGYATVLHRDVLRAAGPTPYHRVSWR 244 >UniRef50_C8WAJ0 Ribonuclease n=2 Tax=Atopobium RepID=C8WAJ0_ATOPD Length = 257 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 79/186 (42%), Positives = 106/186 (56%), Gaps = 1/186 (0%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEI 61 + + LV GVDEVGRG + G + AV L I GLNDSKKL+ +R L E+I Sbjct: 62 FQKEFSGGGLVVGVDEVGRGSVAGPLTVCAVCLPDEPIIYGLNDSKKLTATKREILAEQI 121 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 +E A + + P IDE+ + AM +AV I P+ VLIDGN + Sbjct: 122 QEVATAIGIAHISPQRIDEVGMAQCLRDAMLQAVKNTGIEPDCVLIDGNPM-HIHPKEKT 180 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 +VKGD+R+ I+AASI+AKVTRDA M A D +P Y A+ KGY +A H++ + E G + Sbjct: 181 LVKGDARIASIAAASIVAKVTRDALMVAYDEEYPGYYLAECKGYASAEHIKAIGEKGLSP 240 Query: 182 HHRRSF 187 HR SF Sbjct: 241 IHRASF 246 >UniRef50_C7MY90 Ribonuclease n=3 Tax=Actinomycetales RepID=C7MY90_SACVD Length = 275 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 85/186 (45%), Positives = 104/186 (55%), Gaps = 2/186 (1%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPAR--PIAGLNDSKKLSEKRRLALYEEI 61 V GVDE GRG G +V AA +L P + L DSK L+ R +YE I Sbjct: 23 LDRRGLGPVVGVDEAGRGACAGPLVVAACVLRPGDGAKLPELADSKSLTPLARDRVYERI 82 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 +AL +S+ P EID + A + M+RAVA L P YVL+DG R P LP P++ Sbjct: 83 LRRALDYSIVVIPPAEIDVQGVHTANIEGMRRAVAALSQRPGYVLLDGFRVPGLPAPSVP 142 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 V+KGD V ++AAS+LAKVTRD M L +P YGF HKGY T H LAEHG E Sbjct: 143 VLKGDRAVACVAAASVLAKVTRDRIMVGLHAEYPVYGFEVHKGYTTVEHRTALAEHGPCE 202 Query: 182 HHRRSF 187 HR SF Sbjct: 203 AHRWSF 208 >UniRef50_B1ZMV3 Ribonuclease n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMV3_OPITP Length = 261 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 101/215 (46%), Gaps = 37/215 (17%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPAR--------PIAGLNDSKKLSEKRRLAL- 57 + GVDE GRG L G VV AV++ +NDSK+L+ R L Sbjct: 16 EGLSGLIGVDEAGRGALAGPVVAGAVMVTKEFLEGRWAVTKAGRVNDSKQLTPAMREELW 75 Query: 58 --YEEIKEKALSWSL-GRAEPHEIDELNILHATMLAMQRAVAGLHIAP------------ 102 +EE+ + + G A+ E+++LNIL AT LAMQRA+ ++ Sbjct: 76 AEFEELVNQGQIHATFGVADVAEVEQLNILGATKLAMQRALEAIYPPSAFQQKTEPDLFT 135 Query: 103 -------------EYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAA 149 +L+DG K P P +++ GD+R I+ ASI+AKV RD M Sbjct: 136 SAEELAAYQPTVSCRILLDGLAMRKFPYPHHSIISGDARSLCIAMASIVAKVQRDRLMCE 195 Query: 150 LDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 L++ P YGFAQHKGY T H E L G HR Sbjct: 196 LELKHPGYGFAQHKGYGTPEHCEALLRLGRCAQHR 230 >UniRef50_B0S8P2 Ribonuclease n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S8P2_LEPBA Length = 246 Score = 192 bits (488), Expect = 7e-48, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 87/203 (42%), Gaps = 31/203 (15%) Query: 16 DEVGRGPLVGAVVTAAVILDPAR--------PIAGLNDSKKLSEKRRLALYEEIKEKALS 67 DE GRG L G V V + L DSKK+ E +R L EI + A Sbjct: 28 DEAGRGTLAGPVSVGCVSFSSQTLEKIQSGTILKNLRDSKKIPEPKRFELRTEILQYAAY 87 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE--------------------YVLI 107 W + ID NI A + RA+ ++ + Sbjct: 88 WHVSFVSAKFIDRFNINQAIFYGISRALPVNPRQVTGHLHKTGIPLGTQTKETLAPFLFV 147 Query: 108 DGNRCPKLPMPAM---AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKG 164 DGN K+ P ++ KGD VP ISAASILAK RD M +D +P YGFA+HKG Sbjct: 148 DGNYKLKIHKPIEGYLSIPKGDDLVPSISAASILAKTYRDEYMEKMDAKYPGYGFAKHKG 207 Query: 165 YPTAFHLEKLAEHGATEHHRRSF 187 Y T H E L + G + HR SF Sbjct: 208 YGTEEHREALRKLGISPIHRLSF 230 >UniRef50_B3T7B1 Putative Ribonuclease HII n=1 Tax=uncultured marine microorganism HF4000_APKG3D20 RepID=B3T7B1_9ZZZZ Length = 252 Score = 191 bits (487), Expect = 8e-48, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 109/226 (48%), Gaps = 39/226 (17%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA--------GLNDSKKLSEKRRLAL 57 + GVDE GRG L G VV A++L +NDSK+L+E++R L Sbjct: 13 SKGRAGIVGVDEAGRGCLAGPVVAGAMLLPTGFFKKASNRRRCVEVNDSKQLNEEQREKL 72 Query: 58 YEEIKEKA----LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE---------- 103 ++ I+ L ++ G A +EI+ NI+ AT +AM+RA+ L E Sbjct: 73 FKTIERLRDLGELWFTTGEATVNEIESENIVGATCIAMRRAMDALGDKCEGRWGPQDKDE 132 Query: 104 ---------------YVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMA 148 VL+DG +LP +VKGD+ ++ ASI AKVTRD M Sbjct: 133 AEGFFASEIEQSERWIVLVDGKPMKRLPHAHEGLVKGDTLSLGVAMASIAAKVTRDRIMR 192 Query: 149 ALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRAL 194 LD +P Y FA +KGY + HL L EHG TE HR F +++ L Sbjct: 193 KLDQSYPAYDFASNKGYGSPNHLRGLDEHGPTEVHRPRF--LEKIL 236 >UniRef50_Q6KH21 Ribonuclease n=1 Tax=Mycoplasma mobile RepID=Q6KH21_MYCMO Length = 205 Score = 191 bits (487), Expect = 9e-48, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 93/190 (48%), Gaps = 3/190 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEK 64 Y + + DEVGRG L G +V A V L P + DSKKL+ ++R L IKE Sbjct: 17 FYNEFESIIACDEVGRGSLAGPIVVACVNLKPNFFNEKVRDSKKLNPRQREELSILIKEN 76 Query: 65 ALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIA-PEYVLIDGNRCPKLPMPAMAVV 123 S+ EID LN L AT A + + +L+D + + Sbjct: 77 G-SFHFCYINSKEIDLLNPLEATKKATTSCLNKFEEKGSQIILLDYLSNFSYSKKFINIK 135 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDI-VFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 KGD+ I++ASILAKV RD M L+ F Y F ++KGY T HLE + G ++ Sbjct: 136 KGDNTSFSIASASILAKVERDNFMINLNNDEFDIYDFFKNKGYGTKNHLEAIKIFGPSKI 195 Query: 183 HRRSFGPVKR 192 HR S+ P+K+ Sbjct: 196 HRLSYKPLKK 205 >UniRef50_Q9ZJR1 Ribonuclease HII n=15 Tax=Helicobacteraceae RepID=RNH2_HELPJ Length = 209 Score = 191 bits (485), Expect = 1e-47, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 99/193 (51%), Gaps = 8/193 (4%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDP----ARPIAGLNDSKKLSEKRRLALYEEIKEKA- 65 + G+DE GRG L G++ A V+ + GL DSKKLS K+R L ++IK Sbjct: 6 MTLGIDEAGRGCLAGSLFVAGVVCNEKIALEFLKMGLKDSKKLSPKKRFFLEDKIKTHGE 65 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM---PAMAV 122 + + + + +EID L + LA++ V + IDGN L + Sbjct: 66 VGFFVVKKSANEIDHLGLGACLKLAIEEIVENGCSLANEIKIDGNTAFGLNKRYPNIQTI 125 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 +KGD + +I+ AS+LAK ++D EM L +F +YG+ ++ GY T H+E + + GAT Sbjct: 126 IKGDETIAQIAMASVLAKASKDREMLELHALFKEYGWDKNCGYGTKQHIEAINKLGATPF 185 Query: 183 HRRSFGPVKRALG 195 HR SF R L Sbjct: 186 HRHSFTLKNRILN 198 >UniRef50_Q13BU3 Ribonuclease HII n=19 Tax=Bacteria RepID=RNH2_RHOPS Length = 298 Score = 188 bits (479), Expect = 8e-47, Method: Composition-based stats. Identities = 88/190 (46%), Positives = 108/190 (56%), Gaps = 1/190 (0%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 + VAG DE GRGPL G VV AAV+LDP R GL+DSK+L+ RR L+EEI Sbjct: 79 LIKRGVWPVAGCDEAGRGPLAGPVVAAAVVLDPKRVPKGLDDSKRLTADRREELFEEICA 138 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVV 123 A ++ A P I+ NIL A++ A+ RAV L P++V +DG + AVV Sbjct: 139 TA-QVAVAYASPERINRDNILRASLWALTRAVHALPDLPQHVFVDGRDRLATRCESEAVV 197 Query: 124 KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 GD + I+AASI+AKV+RD M L P YGF HKGY HL LA G T HH Sbjct: 198 GGDGLIASIAAASIIAKVSRDRLMCRLAQECPGYGFESHKGYGVPEHLAALARLGPTVHH 257 Query: 184 RRSFGPVKRA 193 RR F PV A Sbjct: 258 RRFFAPVAAA 267 >UniRef50_B9L797 Ribonuclease n=3 Tax=Epsilonproteobacteria RepID=B9L797_NAUPA Length = 196 Score = 188 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 98/187 (52%), Gaps = 14/187 (7%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARP----------IAGLNDSKKLSEKRRLALYEEI 61 + G+DE GRGP+ G +V A I + + LNDSKKL+ K+R L+E I Sbjct: 5 ICGIDEAGRGPIAGPLVVAGCIFKNEKLKVKSEKWENFLQKLNDSKKLNAKKREELFEII 64 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMA 121 +E + + + IDE + A A+ L L DGN + Sbjct: 65 QET-CEYHIVFVDNKTIDEKGLSFAINYALNEIKKTL--KANKYLFDGNSNFGVKG-IET 120 Query: 122 VVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATE 181 ++KGD ++ +ISAASILAKV+RD M + +P Y F +HKGY T H+E++ ++G ++ Sbjct: 121 LIKGDGKIKQISAASILAKVSRDKYMLEIADKYPMYNFKKHKGYITKEHIEEIKKNGFSD 180 Query: 182 HHRRSFG 188 HR+S+ Sbjct: 181 IHRKSYR 187 >UniRef50_A4S5U9 Ribonuclease (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5U9_OSTLU Length = 189 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 82/185 (44%), Positives = 112/185 (60%), Gaps = 3/185 (1%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIK-E 63 V GVDE GRGPL G VV AA + + +NDSK+L+E+ R ++EE+ Sbjct: 6 WEAGRHRVVGVDEAGRGPLAGPVVAAACFVPKDCVVDCVNDSKQLTEEGREEIFEELMAN 65 Query: 64 KALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPK-LPMPAMAV 122 K + + + + IDE+NIL TM AM R+ A + ++VLIDGNR PK L A A+ Sbjct: 66 KDIEYGVCVIDQDRIDEINILECTMEAMHRSAADV-PNVDWVLIDGNRVPKPLEGKAEAI 124 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD++ I+AASI+AKVTRD M +D FP YGF HKGY T H+ + +HG + Sbjct: 125 VKGDAKNVAIAAASIIAKVTRDRMMLEIDKEFPMYGFKDHKGYGTKAHMAAIDKHGPCVY 184 Query: 183 HRRSF 187 HR++F Sbjct: 185 HRKTF 189 >UniRef50_UPI000051041B ribonuclease HII n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051041B Length = 243 Score = 185 bits (471), Expect = 6e-46, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 104/217 (47%), Gaps = 32/217 (14%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD-----PARPIAGLNDSKKLSEKRRLALY 58 + + V GVDEVGRG L G V + D A AG++DSK+LS R Sbjct: 15 LLAEGYEFVIGVDEVGRGALAGPVSVGVALFDLREVTAAEVPAGIHDSKQLSALSRQTAT 74 Query: 59 EEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL---------HIAPEYVLIDG 109 + + A + S+G P+E+DEL + A LA +RA++ + +L+DG Sbjct: 75 DRVNGWARATSVGSTTPNELDELGMTMALNLAGRRALSEMLLECVGSTDFPPSTMILLDG 134 Query: 110 NRCP-----------------KLPMPA-MAVVKGDSRVPEISAASILAKVTRDAEMAALD 151 L +P V+KGD VP I+AASI+AKV RD EM AL Sbjct: 135 KHDWLSAPLTLDCLGIFGDAADLQLPQVRTVIKGDGSVPVIAAASIVAKVQRDEEMIALA 194 Query: 152 IVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 PQYG+ + GY T H +A+ G + HHRRSF Sbjct: 195 KANPQYGWQSNVGYGTMKHRRGIADFGPSIHHRRSFR 231 >UniRef50_B6YVT5 Ribonuclease HII n=10 Tax=Euryarchaeota RepID=RNH2_THEON Length = 227 Score = 181 bits (461), Expect = 9e-45, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 28/208 (13%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIKEKALS 67 +AG+DE GRGP++G +V AAV++D G+ DSKKL+ KRR L++EI + Sbjct: 3 LAGIDEAGRGPVLGPMVIAAVVVDEGNVPKLEELGVKDSKKLTPKRRERLFDEIVQLLDD 62 Query: 68 WSLGRAEPHEIDELN--ILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM-------- 117 + + P EID + + +A+ L + P+ V ID + Sbjct: 63 YVILELWPEEIDSREGTLNEFEVENFVKALNSLKVKPDVVYIDAADVKEARFGEEIKAKL 122 Query: 118 ----PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHL-- 171 +A K D + +SAASILAKV RD + L + + GYP+ Sbjct: 123 DFEADIIAEHKADDKFVPVSAASILAKVARDRAIEKLKDQYGE----IGSGYPSDPRTRT 178 Query: 172 ---EKLAEHG-ATEHHRRSFGPVKRALG 195 E +HG RR++ +K+ Sbjct: 179 FLEEYYRKHGEFPPIVRRTWKTLKKIEE 206 >UniRef50_B6BTW0 Ribonuclease n=1 Tax=beta proteobacterium KB13 RepID=B6BTW0_9PROT Length = 179 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 2/178 (1%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGR 72 G+DEVGRG + G VV AAV++D + + ++DSK LS KRR +L +EIK+K + +S+ Sbjct: 3 IGIDEVGRGCVAGPVVAAAVVIDESFDV-LVSDSKLLSAKRRESLDKEIKKKCVDFSISV 61 Query: 73 AEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEI 132 +DE+NI A++LAM++A L + DG PK+ A+A V GD EI Sbjct: 62 INSKIVDEINIHKASLLAMEQAYINLCHQSGSIKCDGKFTPKIDG-AVAHVNGDKLYTEI 120 Query: 133 SAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 SAASI+AKV RD M + + +P Y F +HKGY T HLE + ++G HR +F P Sbjct: 121 SAASIIAKVYRDHLMNYISLKYPDYHFDKHKGYLTKLHLEAIEQYGPCNIHRLTFKPF 178 >UniRef50_A7H1A3 Ribonuclease HII n=16 Tax=Campylobacter RepID=RNH2_CAMJD Length = 191 Score = 180 bits (457), Expect = 2e-44, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 92/177 (51%), Gaps = 5/177 (2%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 + G+DE GRG L G ++ AA L+ + GL DSKKLSEK+R LYE I + + + + Sbjct: 18 LIGIDEAGRGALAGPMMMAACKLNK--KLDGLCDSKKLSEKKREELYEIIIKNSN-YLIL 74 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 +ID L + ++ ++ DGN + +K D+ + + Sbjct: 75 AFSSEQIDTLGLSTCLKTGLKLIKKHFKAENNFLY-DGNTNLGING-IKTQIKADTSILQ 132 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 +SAASILAKV++D M L FP Y F ++K Y T H E +A+ G + HR+SF Sbjct: 133 VSAASILAKVSKDKVMNFLAKDFPCYEFEKNKAYGTKAHKEVIAKFGICKLHRKSFK 189 >UniRef50_B4U9C0 Ribonuclease n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9C0_HYDS0 Length = 213 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 11/191 (5%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD------PARPIAGLNDSKKLSEKRRLA 56 +F+ L A VDE GRG L G +V A+++D DSKKL E R Sbjct: 24 QFLKRGLTL-ACVDEAGRGALAGPLVVGAILVDNLDIFFEEEYTLIKGDSKKLKEADRFW 82 Query: 57 LYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP 116 ++ IK+ +S+G A EID+ I AT +AM+RA+ L + VL D Sbjct: 83 AFDTIKKY-FKYSVGIATHQEIDDFGITKATKMAMKRALEALKGF-DIVLSDFINLEDYD 140 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 + +VKGD + I AS++AK TRD M F + F +HKGY T H++++ + Sbjct: 141 C--IPIVKGDEKSFSIRLASLVAKATRDKMMIDYASSFKPFSFDKHKGYGTKEHIKEIKD 198 Query: 177 HGATEHHRRSF 187 G + HRRSF Sbjct: 199 FGLSSIHRRSF 209 >UniRef50_Q3XZB5 Ribonuclease n=1 Tax=Enterococcus faecium DO RepID=Q3XZB5_ENTFC Length = 151 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 63/151 (41%), Positives = 89/151 (58%), Gaps = 4/151 (2%) Query: 44 NDSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE 103 N+ ++ SE + K+K L+ +G + ID++NI A+ LAM +AV L I P Sbjct: 4 NNYQRKSENF---FINKFKKKPLAIGIGIVDQQTIDDVNIYEASKLAMIQAVEKLSIVPS 60 Query: 104 YVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHK 163 Y+LID LP+ ++KGD+R I+AASI+AKV RD M D+++P YGF+ + Sbjct: 61 YLLIDAMTL-DLPIQQEKIIKGDARSVSIAAASIIAKVYRDQLMKEYDVLYPGYGFSHNA 119 Query: 164 GYPTAFHLEKLAEHGATEHHRRSFGPVKRAL 194 GY T HLE L G T HR+SF PVK+ L Sbjct: 120 GYGTKEHLEGLERQGITPIHRKSFAPVKKYL 150 >UniRef50_C5LZG5 Ribonuclease n=5 Tax=Eukaryota RepID=C5LZG5_9ALVE Length = 630 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 84/198 (42%), Positives = 111/198 (56%), Gaps = 16/198 (8%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPA-RPIAGLNDSKKLS-EKRRLALYEEIKE-KAL 66 +V GVDE GRGPL G VV AAV ++ G+ DSK +S E+ R +YE++ K + Sbjct: 8 DIVIGVDEAGRGPLCGPVVAAAVYINQDTYIPYGICDSKTISNEEYRDMMYEQLTNNKGV 67 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE------YVLIDGNRCPKLPM--- 117 WS+G + ID +NIL AT A AV L E +VLIDGNR P + Sbjct: 68 KWSVGIVDNKVIDTINILQATFTAKTEAVLKLTKDGEGRKSKYHVLIDGNRVPPQLLNNN 127 Query: 118 ----PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEK 173 +VKGDS+ I+AASI+AKVTRD M + PQY +QHKGYPT H+ Sbjct: 128 NINLQCTPIVKGDSKEYIIAAASIIAKVTRDRIMHHIHNNIPQYNVSQHKGYPTTAHIAL 187 Query: 174 LAEHGATEHHRRSFGPVK 191 L G +++HR +F P+K Sbjct: 188 LKRLGPSKYHRLTFAPLK 205 >UniRef50_B1LVZ9 Ribonuclease n=9 Tax=Alphaproteobacteria RepID=B1LVZ9_METRJ Length = 232 Score = 178 bits (453), Expect = 8e-44, Method: Composition-based stats. Identities = 79/180 (43%), Positives = 96/180 (53%), Gaps = 9/180 (5%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGL----NDSKKLSEKRRLALYEEIKEKALSW 68 G DEVGRG L G VV AAV DP L +DSK++ E R L I+ A Sbjct: 52 IGCDEVGRGALCGPVVVAAVWFDPTAIPPDLLAALDDSKRVPEPVRERLAPLIRAHARVA 111 Query: 69 SLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNR-CPKLPMPAMAVVKGDS 127 ID +NI AT+ AM RAVA L +A VL+DG P L P AV+ GD Sbjct: 112 V-AAGSRALIDRINIRGATLDAMARAVARLGLAAP-VLVDGRDALPGL--PGRAVIGGDH 167 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 VP+I+AASI+AKV RD M L P YG+ ++ GY TA H L + G + HHR SF Sbjct: 168 LVPQIAAASIVAKVLRDQLMRRLARRHPGYGWERNVGYGTAVHRAGLTQLGRSAHHRLSF 227 >UniRef50_A5FW78 Ribonuclease HII n=3 Tax=Alphaproteobacteria RepID=RNH2_ACICJ Length = 199 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 88/183 (48%), Positives = 112/183 (61%), Gaps = 3/183 (1%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIA---GLNDSKKLSEKRRLALYEEIKEKALS 67 +VAGVDEVGRGPL G VV AA IL P ++DSK+LS +R A + E + Sbjct: 13 VVAGVDEVGRGPLAGPVVAAAAILPADLPPEIAALIDDSKRLSPAQREAALAALIESGAA 72 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDS 127 S A EI LNIL A++LAM+RAVA L + P++VL+DG P LPMP VV GD Sbjct: 73 ISAAAASVAEIARLNILQASLLAMRRAVARLAVRPDHVLVDGQVAPDLPMPCTPVVGGDG 132 Query: 128 RVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 I+AASI AK+ RD M+ LD +P YG+A++ GY T H + + G T HHRR F Sbjct: 133 LSLSIAAASIAAKLVRDRAMSRLDRRYPGYGWARNSGYGTKTHRDAILGLGITPHHRRGF 192 Query: 188 GPV 190 GP+ Sbjct: 193 GPL 195 >UniRef50_C7LXT7 Ribonuclease n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LXT7_ACIFD Length = 200 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 81/194 (41%), Positives = 99/194 (51%), Gaps = 9/194 (4%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP-------ARPIAGLNDSKKLSEKRRLA 56 P + G+DEVGRG G VV A A P G+ DSK LS R A Sbjct: 2 LHQPSGDRLVGIDEVGRGAWAGPVVVGAARGSVAAAAAILAHPRGGVRDSKALSPAAREA 61 Query: 57 LYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLP 116 ++ L ++G A EID+L + A LA RA+ VL+DG Sbjct: 62 ALGALEAAGLELTVGSASAREIDKLGLTGALRLAAHRALGAASELE--VLLDGRVPYVEA 119 Query: 117 MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAE 176 +V GD R P I+AASI+AKV RDA M ALD + YGFA+HKGY TA H L+E Sbjct: 120 GRVHCIVGGDRRHPLIAAASIVAKVRRDAFMVALDELAAGYGFARHKGYGTAEHRRALSE 179 Query: 177 HGATEHHRRSFGPV 190 HG T HRRSFGP+ Sbjct: 180 HGVTPWHRRSFGPI 193 >UniRef50_C8WGY3 Ribonuclease n=3 Tax=Coriobacteriaceae RepID=C8WGY3_EGGLE Length = 262 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 4/188 (2%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKA 65 ++ G+DEVGRGPL G + AV+L I GLNDSK++ + R + ++K A Sbjct: 69 ERGDGVIVGLDEVGRGPLAGPLAVGAVVLPSEPFIEGLNDSKQVKPEARERIAVQVKAVA 128 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNRCPKLPMPAMAV 122 ++W++ E +ID + + LA +RA+ + + P+ VL+DGN +L + V Sbjct: 129 VAWTVEYVEASDIDACGMTASLALAFRRAIRRIEEAGVRPDVVLLDGNPM-RLDEREVNV 187 Query: 123 VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEH 182 VKGD + I+AASI+AKV RDA M +P+YGF KGY +A H+E + +G T Sbjct: 188 VKGDGKCASIAAASIVAKVERDALMCRYAEEYPEYGFDACKGYASAAHIEAIKRYGLTPI 247 Query: 183 HRRSFGPV 190 HR +F Sbjct: 248 HRATFCTA 255 >UniRef50_C1RMG0 Ribonuclease n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RMG0_9CELL Length = 279 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 103/217 (47%), Gaps = 28/217 (12%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP--IAGLNDSKKLSEKRRLALYEEI 61 + + VAG+DEVGRG L G V V++D G+ DSK L+ R AL + Sbjct: 38 LLRTGLRYVAGMDEVGRGSLAGPVSVGVVVVDVGTRSAPRGVADSKLLTPAARAALLPSL 97 Query: 62 KEKALSWSLGRAEPHEIDELNILHATMLAMQRA---VAGLHIAPEYVLIDGNRC------ 112 ++ ++G A P EID+ I+ A LA RA V + + V++DG+ Sbjct: 98 GRWGVARAVGHASPTEIDDRGIVAALRLAGTRALRSVLEVVEQVDAVVLDGSHDWLTPPE 157 Query: 113 --------------PKLPMPAMAV-VKGDSRVPEISAASILAKVTRDAEMAALDIVFPQY 157 P L +PA+ + VK D ++AAS+LAK RDA M P+Y Sbjct: 158 PDLFGTQSELFAPSPDLRVPAVHLRVKADRSCATVAAASVLAKCERDALMVQHAAAHPEY 217 Query: 158 GFAQHKGYPTAFHLEKLAEHGATEHHRRSFG--PVKR 192 + ++KGY + H+ L E G T HRRS+ V+ Sbjct: 218 RWDENKGYASPEHVAALRELGPTPLHRRSWRLPTVQE 254 >UniRef50_A4J2Z7 Ribonuclease n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2Z7_DESRM Length = 355 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 3/175 (1%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPIAGL-NDSKKLSEKRRLALYEEIKEKALSWSLG 71 AG+DEVG + G +V A V+L I G+ DSK+++ K + I EKA W + Sbjct: 89 AGIDEVGVSSIAGPMVAAVVVLPHDHNIPGIPRDSKEMTLKSIEEISSLIFEKADFWHIA 148 Query: 72 RAEPHEIDELNILHAT-MLAMQRAVAGLHIAPE-YVLIDGNRCPKLPMPAMAVVKGDSRV 129 P EID++ A L M+ A + P+ +++DG AV KGDS Sbjct: 149 SISPKEIDDIGPELAREKLWMECANKVRSVFPKIRIIVDGKDKIPGFTKQNAVSKGDSIF 208 Query: 130 PEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 +SAA+I+AK D EM L +PQY F+++KGYP H + +G HR Sbjct: 209 SGVSAAAIVAKQYCDNEMRILHNYYPQYNFSKNKGYPVYEHYVAIKNYGICPSHR 263 >UniRef50_UPI000197799D ribonuclease HII n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI000197799D Length = 239 Score = 173 bits (438), Expect = 4e-42, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 52/230 (22%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPI-AGLNDSKKLSEKRRLALYEEIKEKA---- 65 +AG+DE GRG + GA+ A VI G DSKKLS K+R +Y+ + E Sbjct: 2 WLAGIDEAGRGCICGALFVAGVIGREENIAHFGAKDSKKLSPKQRERIYQTLLESQHKGE 61 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGL--------------------------- 98 + + + E EID+ + A +++ + + Sbjct: 62 IGLFVAQIEAWEIDKFGLSIAMKNGIEQILCRIADFATLQNLIGQNVEQNTAKHNLLEQD 121 Query: 99 -----------HIAPEYVLIDGNRCPKLPMPAM---------AVVKGDSRVPEISAASIL 138 A + +++DGN + +P + +VK D +P +S ASI+ Sbjct: 122 VEQNPTDSTDSKNALQEIIMDGNTTFQAKIPHILTQSGVGVQTLVKADDIMPIVSCASIV 181 Query: 139 AKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 AKV++D +M LD ++PQY A++KGY T H + +A++G HHR+SF Sbjct: 182 AKVSKDRQMHELDKLYPQYFLAKNKGYGTLQHKKAIAKNGYCPHHRKSFK 231 >UniRef50_O75792 Ribonuclease H2 subunit A n=20 Tax=Chordata RepID=RNH2A_HUMAN Length = 299 Score = 173 bits (438), Expect = 4e-42, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 77/222 (34%), Gaps = 33/222 (14%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIK 62 V GVDE GRGP++G +V A + DSK L E R L+ +++ Sbjct: 25 RKEPCVLGVDEAGRGPVLGPMVYAICYCPLPRLADLEALKVADSKTLLESERERLFAKME 84 Query: 63 E-KALSWSLGRAEPHEID-------ELNIL---HATMLAMQRAVAGLHIAPEYVLIDGNR 111 + + W+L P+ I + N+ H T + + + V +D Sbjct: 85 DTDFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTATGLIQYALDQGVNVTQVFVDTVG 144 Query: 112 CPKLP----------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALD--IVFPQYGF 159 P+ + K D+ P +SAASI AKV RD + Sbjct: 145 MPETYQARLQQSFPGIEVTVKAKADALYPVVSAASICAKVARDQAVKKWQFVEKLQDLDT 204 Query: 160 AQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 GYP + + G + R S+ + L Sbjct: 205 DYGSGYPNDPKTKAWLKEHVEPVFGFPQFVRFSWRTAQTILE 246 >UniRef50_C3XGM9 Ribonuclease n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGM9_9HELI Length = 207 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 10/193 (5%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDP----ARPIAGLNDSKKLSEKRRLALYE 59 + + L+ G+DE GRG + G++ A+V+LD + + DSK+L++ +R + Sbjct: 6 YWAINMALICGIDEAGRGCVAGSLFIASVMLDECYFESFKKLDIRDSKQLTQTQRQERAD 65 Query: 60 EI----KEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAG-LHIAPEYVLIDGNRCPK 114 I +E + + ID + + ++ + + ++ DGN Sbjct: 66 SIQEFLREHGGRVKIVSFDSVNIDSKGLGQCMQMGLKELLLHAKKHQCKSIIFDGNTNFG 125 Query: 115 LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKL 174 + ++KGDS+ ISAASILAK +D+EM L ++PQY +KGY T H+E + Sbjct: 126 V-QEIDTLIKGDSKHVLISAASILAKTNKDSEMLTLHDLYPQYNLKSNKGYLTKAHIESI 184 Query: 175 AEHGATEHHRRSF 187 A+HG + HR+S+ Sbjct: 185 AKHGYSPIHRKSY 197 >UniRef50_B5Y443 Ribonuclease (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y443_PHATR Length = 194 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 17/195 (8%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPA----RPIAGLNDSKKLSEKRRLALYEEIKEKA-- 65 V G DE G G + G VVTA+ + I G++DSK LS K R +YE I + Sbjct: 1 VIGSDESGSGCIAGPVVTASCCVRDNAADGLWIDGVDDSKSLSTKDRERIYEAIVQNPSR 60 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGL---------HIAPEYVLIDGNRCPKLP 116 WS+ EIDE + +AT+ Q ++ + H P Y ++DG+R PK+ Sbjct: 61 YLWSIQERSAAEIDEQSATNATLNCFQDSIEDVVSQLRAEYPHCQP-YSIVDGHRSPKVD 119 Query: 117 -MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLA 175 + +GD+ V ++ ASILA+VTRD MA + +P Y F ++ GYP+ H E L Sbjct: 120 GCTSRPWKQGDAYVYTVALASILARVTRDRHMALAAVKYPLYDFDRNGGYPSRAHTEILH 179 Query: 176 EHGATEHHRRSFGPV 190 +HG + HR+S PV Sbjct: 180 QHGYSPIHRQSCKPV 194 >UniRef50_UPI00019264AB PREDICTED: similar to ribonuclease H2, large subunit n=3 Tax=Eumetazoa RepID=UPI00019264AB Length = 339 Score = 169 bits (430), Expect = 3e-41, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 78/221 (35%), Gaps = 32/221 (14%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIK 62 G+DE GRGP++G +V + G DSK L+E++R L I+ Sbjct: 25 KTEPCCLGIDEAGRGPVLGPMVYSVCYCPISMIKKLSDLGFADSKTLTEEKRDNLLSVIE 84 Query: 63 EKA--LSWSLGRAEPHEI------------DELNILHATMLAMQRAVAGLHIAPEYVLID 108 + W++ P EI +E++ A L + AG +I YV Sbjct: 85 NNCDFIGWAIKIISPTEISNEMLRRYKVTLNEISHGAAIELTRKTINAGANITEMYVDTV 144 Query: 109 GNRCPKLP--------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA 160 G+ + K D+ P +SAASI AKV RD + Sbjct: 145 GDASKYQNKLSEVFDGVSVKVTPKADALFPIVSAASICAKVARDRCIQGWQFPEGDIKED 204 Query: 161 QHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 GYP ++ + G + R S+ L Sbjct: 205 YGSGYPADPKTKQWLKDVVDPVFGFPQFVRFSWSTCVNILE 245 >UniRef50_Q468N6 Ribonuclease HII n=4 Tax=Methanosarcinaceae RepID=RNH2_METBF Length = 224 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 35/215 (16%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPAR----PIAGLNDSKKLSEKRRLALYEEIKEKAL 66 ++AG+DE G+GP++G + V ++ +R + G+ DSKKL+ K+R L +IK+ A Sbjct: 2 MIAGIDEAGKGPVIGPMCIGGVKIEESRAHILKVLGVADSKKLTPKKREQLAAQIKKHAD 61 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGL--HIAPEYVLIDG--------------- 109 + + P +IDEL + M + + + P+ + D Sbjct: 62 GFFVLEVSPSQIDELRKIMTMNEIMVVCFSKVLEQLKPDLLYADAADVNAERFATNIRKQ 121 Query: 110 ----NRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGY 165 N + +++ + D+ P +SAASI+AKV RD + L ++G GY Sbjct: 122 YSKTNPDHAKEIEIISMHQADATYPVVSAASIIAKVRRDELIEELKK---EWGLDFGSGY 178 Query: 166 PTAFHLEKLAEHG-------ATEHHRRSFGPVKRA 193 P+ ++ + E R+S+ V+ Sbjct: 179 PSDPKTKEFLLNWGKEHSGEFPEIVRQSWQTVENI 213 >UniRef50_Q82KF0 Ribonuclease HII n=15 Tax=Actinomycetales RepID=RNH2_STRAW Length = 233 Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats. Identities = 78/182 (42%), Positives = 103/182 (56%), Gaps = 1/182 (0%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 +++AGVDEVGRG G V A I RP GL DSK L+ KRR L EE+++ S Sbjct: 19 GAKVIAGVDEVGRGAWAGPVTVCAAITGLRRPPEGLTDSKLLTVKRRTVLAEELRKWVTS 78 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMAVVKGD 126 ++LG A P EID L + A LA RA+ L + P+ V++DG P V+KGD Sbjct: 79 YALGHASPEEIDALGMTAALRLAAVRALEALPVRPDAVILDGKHDYLGSPWKVRTVIKGD 138 Query: 127 SRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRS 186 ++AAS++AKV RD MA L I +GFA + GYP+ H LAE G T +HR S Sbjct: 139 QSCVAVAAASVIAKVQRDKMMAELGIEHADFGFAANAGYPSPVHKAALAERGPTPYHRLS 198 Query: 187 FG 188 + Sbjct: 199 WA 200 >UniRef50_D2NTN7 Ribonuclease HII n=2 Tax=Rothia mucilaginosa RepID=D2NTN7_9MICC Length = 278 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 74/230 (32%), Positives = 106/230 (46%), Gaps = 45/230 (19%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIA--GLNDSKKLSEKRRLALYEE 60 + + VAG+DEVGRG + G V IL P + GL DSK LS RR ++ E Sbjct: 34 QLFASGARTVAGIDEVGRGSMAGPVTVGVAILTPDATLEVGGLIDSKALSPARRESMVPE 93 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGL---HIAPEYVLIDGNRCPKLP- 116 I++ + ++G EP +ID L + + LA QRA+A L + L+DG P Sbjct: 94 IRQW-CAVAVGHVEPADIDRLGMTLSLRLAAQRALAELARRGYRADAALLDGKHDWFTPP 152 Query: 117 --------------------------------------MPAMAVVKGDSRVPEISAASIL 138 MP V+KGD + I+AAS++ Sbjct: 153 QEDLFSALAPDPAQAHYNALLAQAWEGAGEGGAGEPAQMPVTMVIKGDYKCASIAAASVV 212 Query: 139 AKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFG 188 AKV RD M LD +P YG+A++KGY +A H E ++ G + HR S+ Sbjct: 213 AKVERDELMVQLDTRYPGYGWAKNKGYGSAAHREAISVQGPSPQHRLSWS 262 >UniRef50_B1VXS2 Ribonuclease HII n=10 Tax=Actinomycetales RepID=RNH2_STRGG Length = 236 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 72/185 (38%), Positives = 98/185 (52%), Gaps = 4/185 (2%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALS 67 + VAGVDEVGRG G V A + RP GL DSK L+ +RR L ++ + Sbjct: 19 GARTVAGVDEVGRGAWAGPVTVCAAVTGLRRPPEGLTDSKLLTPRRRAELDPVLRSWVTA 78 Query: 68 WSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC-PKLPMPAMAVVKGD 126 ++LG A P EID+L + A LA RA+ GL + P+ V++DG +P V+KGD Sbjct: 79 YALGDASPQEIDDLGMTAALRLAAVRALEGLPVRPDAVILDGKHDYLGVPWKVRTVIKGD 138 Query: 127 SRVPEISAASILAKVTRDAEMAAL---DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHH 183 ++AAS++AKV RD MA L + F + GYP+ H L E G T HH Sbjct: 139 QSCIAVAAASVIAKVHRDRMMAELGAASEDCADFDFGANAGYPSPVHRAALEERGPTAHH 198 Query: 184 RRSFG 188 R S+ Sbjct: 199 RLSWA 203 >UniRef50_UPI00006CE52A ribonuclease HII family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CE52A Length = 284 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 90/232 (38%), Gaps = 38/232 (16%) Query: 2 IEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLAL 57 E + V G+DE GRGP++G +V + P + G NDSK+L+E++R L Sbjct: 4 FENKKKNLDWVMGIDEAGRGPVLGPMVYGCCVWPIQYEPELKLEGFNDSKQLTEQKRDQL 63 Query: 58 Y---EEIKEKALSWSLGRAEPHEI-------DELNILHATMLAMQRAVAGL---HIAPEY 104 Y EE+K L + + + + ++ + A + + Sbjct: 64 YARMEELKNDKLYFEVRILSAEFLSNRMLAKNRDSLNELSFNAAYSLIDSVMSQGFNVTQ 123 Query: 105 VLIDGNRCPKLP-----------MPAMAVV---KGDSRVPEISAASILAKVTRDAEMAAL 150 V +D + P + K D++ P + AASI AKVTRD ++ Sbjct: 124 VFLDTVGKEETYQAKLYQDYKYTYPQLKFTVSSKADAKFPVVGAASICAKVTRDLQITNN 183 Query: 151 DIVFP-QYGFAQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 D+ P A GYP+ + +K + G + R S+ V Sbjct: 184 DMREPLDLSKATGSGYPSDPNTKKWLQEVFDPVFGFPSNVRYSWSTVDNIFN 235 >UniRef50_A2DUE3 Ribonuclease n=1 Tax=Trichomonas vaginalis RepID=A2DUE3_TRIVA Length = 269 Score = 167 bits (425), Expect = 1e-40, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 86/222 (38%), Gaps = 35/222 (15%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-IAGLNDSKKLSEKRRLALYEEIKEKA 65 +L G+DE GRGP +G +V + I ++DSKKL+ ++R +++EIK+ Sbjct: 16 KGIELEMGIDEAGRGPALGPMVYSGAIAPNKYEWPKDVDDSKKLTAEQREEIFDEIKKLP 75 Query: 66 LSWSLGRAEPHEI--------------DELNILHATMLAMQRAVAGLHIAPEYVLIDG-- 109 + +++ EI + ++ A L GL+I YV G Sbjct: 76 VGFAVRVISAEEISAKQTALVNPPISLNTVSHHAARDLVQAFLDKGLNIKALYVDTVGIA 135 Query: 110 --------NRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGF-- 159 ++ P + + A K D+ + AASI AKVTRD +A P Sbjct: 136 ESYQDWLQDKFPNIKVTVRA--KADATYKVVGAASICAKVTRDRLLADFKFEEPGLEISH 193 Query: 160 AQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 GYP+ E G R + P+K Sbjct: 194 DWGSGYPSDPKTSNWLETNFDPVFGYPSVARFDWKPIKMMFE 235 >UniRef50_A7I9P7 Ribonuclease HII n=4 Tax=Methanomicrobiales RepID=RNH2_METB6 Length = 213 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 84/207 (40%), Gaps = 27/207 (13%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPIAG--LNDSKKLSEKRRLALYEEIKEKALSW 68 ++ GVDE G+G ++G +V A V + I G L DSK+LS R L+ IK+K Sbjct: 1 MICGVDEAGKGSVLGPMVIAGVGVGSTEMIDGFGLRDSKQLSPSERERLFVLIKKK-CKV 59 Query: 69 SLGRAEPHEID--ELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKL----------- 115 + EID + T +A AV +APE +D Sbjct: 60 ATVVISAAEIDAFRREMTLNTCVARAHAVVIAQLAPEIAYVDACDVNPFRYAETVRGYLS 119 Query: 116 -PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKL 174 P ++ DS P +SAASI+AKVTRD E+A L + Q GYP+ Sbjct: 120 SPCEIVSEHHADSTYPVVSAASIVAKVTRDREIAKLAKKYGQ----IGSGYPSDPETIAY 175 Query: 175 AEHG------ATEHHRRSFGPVKRALG 195 R+S+ V L Sbjct: 176 LNAYIDEHRIPPPIARKSWKTVSTLLA 202 >UniRef50_Q7VK86 Ribonuclease n=1 Tax=Helicobacter hepaticus RepID=Q7VK86_HELHP Length = 207 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 25/203 (12%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPI-AGLNDSKKLSEKRRLALYEEIKEKA---- 65 VAG+DE GRG + G + A +I + G DSKK+ K+R+ +Y + + Sbjct: 2 WVAGIDEAGRGCICGGLFIAGIIANEQVIAQFGAKDSKKMLPKQRVRVYNALLDSQKRGE 61 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH-----------IAPEYVLIDGNRCPK 114 + + + + + +ID+ + A ++ ++ L P ++IDGN Sbjct: 62 IGFYVAQIQAWDIDKYGLSWAMRSGIEEVLSYLGSYMLEQNILVQNQPLDIVIDGNTTFG 121 Query: 115 LPMP---------AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGY 165 +P ++KGD +P IS AS++AKV++D++M LD ++PQY A++KGY Sbjct: 122 AHIPTFLAHKDVHLKTLIKGDELMPIISCASVVAKVSKDSQMYMLDNLYPQYLLAKNKGY 181 Query: 166 PTAFHLEKLAEHGATEHHRRSFG 188 T H +++ +G HHR+SF Sbjct: 182 ATLEHKKQIMRYGYCPHHRKSFK 204 >UniRef50_B6ACV8 Ribonuclease n=1 Tax=Cryptosporidium muris RN66 RepID=B6ACV8_9CRYT Length = 286 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 88/233 (37%), Gaps = 42/233 (18%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG----LNDSKKLSEKRRLALYEE 60 ++ ++ G+DE GRGP++G +V A ++DSKKL+E R + ++ Sbjct: 14 LFNKRPVILGIDEAGRGPVLGPMVFACFYYPTENEKLLKLMNIDDSKKLTENSREKINKD 73 Query: 61 IKE--KALSWSLGRAEPHEID-------ELNILHATMLAMQRAVA---GLHIAPEYVLID 108 I+ W + P + + N+ + A + + ++ ID Sbjct: 74 IRNNKNQFGWGIYILLPQYLSCQMLKKQKYNLNEISHTAAINLIKSVLQHGVNVTHIYID 133 Query: 109 GNRCP-------KLPMPAMAVV---KGDSRVPEISAASILAKVTRDAEMAAL-----DIV 153 P KL P++ + K DS P +S ASILAKV RD ++ Sbjct: 134 TVGPPESYKKKLKLLFPSINITVTPKADSLYPCVSGASILAKVERDHFLSNWWSFPGHDR 193 Query: 154 FPQYG-----FAQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 + G + Q GYP ++ + G R S+ + + Sbjct: 194 YDHNGNNLSIYEQGSGYPGDPKTKQFLKQIFHKVFGFPNIVRFSWSTADQIIE 246 >UniRef50_Q9SEZ6 Ribonuclease H2 subunit A n=9 Tax=Embryophyta RepID=RNH2A_ARATH Length = 296 Score = 164 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 88/222 (39%), Gaps = 33/222 (14%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG----LNDSKKLSEKRRLALYEEI 61 + + G+DE GRGP++G +V + + + DSK L E++R LYE + Sbjct: 10 WASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEEKREELYESL 69 Query: 62 K-EKALSWSLGRAEPHEID---------ELN-ILHATMLAMQRAVAGLHIAPEYVLIDGN 110 K +K+L W++ +P E+ LN I H + + + + V + + +D Sbjct: 70 KLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVLLTEAYLDTV 129 Query: 111 RCPK-------LPMPAMAVV---KGDSRVPEISAASILAKVTRDAEMAAL--DIVFPQYG 158 P P++ V K DS P +S ASI+AKVTRD + + Sbjct: 130 GDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWLVEETGEDIN 189 Query: 159 FAQHKGYPTAFHLEKLA------EHGATEHHRRSFGPVKRAL 194 GYP + G R S+G L Sbjct: 190 RNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHL 231 >UniRef50_B3L7H0 Ribonuclease n=8 Tax=Aconoidasida RepID=B3L7H0_PLAKH Length = 288 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MIEFVYP--HTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG----LNDSKKLSEKRR 54 +I+ +Y ++ G+DE GRGP++G +V A + ++DSKK+SE R Sbjct: 5 IIDNLYKFGDEEVRLGIDEAGRGPVLGPMVYAGFYCNKEHEKLLKEMKIDDSKKISEADR 64 Query: 55 LALYEEIKEK--ALSWSLGRAEPHEID---------ELN-ILHATMLAMQRAVAGLHIAP 102 ++ ++ W + P +I LN I H T +++ V Sbjct: 65 EMMFHKLNNSKLPFGWRIHVLMPQDISAKMLKKQKYNLNEISHDTAISIINHVISRGCNL 124 Query: 103 EYVLIDGNR------------CPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAAL 150 V +D P + K DS P +SAASI AKVTRD + Sbjct: 125 TEVFVDTVGKANVYEEKLTKLFPHIKCTVRE--KADSLYPVVSAASICAKVTRDFLIKKW 182 Query: 151 DIVFPQYGFAQ--HKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 P + GYP + + G R S+ L Sbjct: 183 KYEEPLVNIDKGFGSGYPGDPITKNFLKNNFDSVFGFPSIVRFSWSTADNMLE 235 >UniRef50_D0YUF0 Ribonuclease n=2 Tax=Mobiluncus mulieris RepID=D0YUF0_9ACTO Length = 278 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 97/244 (39%), Gaps = 67/244 (27%) Query: 10 QLVAGVDEVGRGPLVGAVVTAAVILDPARP----IAGLNDSKKLSEKRRLALYEEIKEKA 65 LV G+DEVGRG L G V ++ GLNDSK L+ +RR AL + I+ Sbjct: 35 TLVGGMDEVGRGALAGPVCIGVTVVSATELAAGFPPGLNDSKALTARRREALVQPIQSWV 94 Query: 66 LSWSLGRAEPHEIDELNILHATMLAMQRAVAG------------LHIAPEYV-------L 106 +++G A EIDE+ I+ A LA RA+ L +Y+ L Sbjct: 95 KDFAIGEATNMEIDEMGIMAAMRLAGWRALNQLDARGHLPQKLLLDGNVDYLQAEHQANL 154 Query: 107 IDG------------------------------------------NRCPKLPMPAMAVVK 124 D N P + +VK Sbjct: 155 FDAQWHLMNPAQPAQPAQPAQPAQPAQPAQPAQPAQPAMGTTPAHNPPPAPLLKVQTLVK 214 Query: 125 GDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHR 184 D ++ A++LAKV RDA M+ L+ P YG++ + GY T H E ++ G + HR Sbjct: 215 ADQHAATVAGAAVLAKVYRDAFMSRLED--PGYGWSHNVGYGTKAHREAISRLGPSRWHR 272 Query: 185 RSFG 188 ++ Sbjct: 273 HTWK 276 >UniRef50_A5ULV6 Ribonuclease HII n=3 Tax=Methanobacteriaceae RepID=RNH2_METS3 Length = 207 Score = 162 bits (411), Expect = 6e-39, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 27/205 (13%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIKEKALS 67 V G+DE GRG ++G +V A VI+ I G+ DSK+L+ RR L ++K+ Sbjct: 3 VLGIDEAGRGSVLGPLVIAGVIVPEKMDIVLERMGVKDSKRLTPNRRTILSRKLKKM-FE 61 Query: 68 WSLGRAEPHEIDE-----LNILHATMLAMQRAVAGLHIAPEYVLIDGNRCP--------- 113 + L +ID +N+ + M++ ++ L PE ++D Sbjct: 62 YDLVVISAQDIDNMRADGINLNEIERIGMEKILSNL--NPEKAIVDAVDIKAERFQNKLA 119 Query: 114 -KLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLE 172 + +A K D E+SAASI+AK RDA +A ++ + + G GYP+ + Sbjct: 120 NDTGVNVVAEHKADDNYIEVSAASIIAKQERDAHIAEINKDYIKMG-GIGSGYPSDPITK 178 Query: 173 KLAEHG----ATEHHRRSFGPVKRA 193 K + + R+S+ V++ Sbjct: 179 KFLTNFTYDEMPDFVRKSWATVEKM 203 >UniRef50_UPI0001C31AB6 Ribonuclease H n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AB6 Length = 226 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 68/188 (36%), Positives = 94/188 (50%), Gaps = 7/188 (3%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPARP-------IAGLNDSKKLSEKRRLALYEE 60 + VAG DE GRG L G +V AAV+ D R ++ LNDSK+ + +RR A+Y Sbjct: 30 GARFVAGADEAGRGCLAGPLVAAAVMFDYERITRSDLRALSALNDSKQQTAERREAIYPV 89 Query: 61 IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM 120 I A ++ ID + + A++ A+A + L DG R L Sbjct: 90 ILRVATRVAVISRCAPGIDRRGLHVTNLAALRDALARVACDGCICLSDGFRVADLGHDQR 149 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT 180 AV+ GD+R I+AAS++AKVTRD M D++ P + FA H GY T H + G T Sbjct: 150 AVIGGDARSASIAAASVVAKVTRDRFMHRADVLHPGWEFASHVGYATPEHRAAIERLGIT 209 Query: 181 EHHRRSFG 188 HR SF Sbjct: 210 PLHRLSFQ 217 >UniRef50_UPI000038E392 ribonuclease HII n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E392 Length = 205 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 32/206 (15%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPA-RPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 G+DE GRGPL+G +V A + D I G+ DSKKLS RR +L+ + ++ ++ Sbjct: 4 CGIDEAGRGPLIGPMVMAILCGDRESLEIIGVADSKKLSPGRRESLFARL--QSYKYNFV 61 Query: 72 RAEPHEIDE------LNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP------- 118 P EID LN+L T +A A V +D +L + Sbjct: 62 IISPSEIDRYVEHQKLNVLEETY---ASKLASWAPASSTVYVDSFDVNELRLQSLLMENT 118 Query: 119 ---AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKL- 174 + K D P +SAASI+AKV RD E+ L + +G GYP+ Sbjct: 119 KRQIVCRHKADEIYPCVSAASIIAKVIRDREIDKLHKDYGDFG----SGYPSDPRTINFV 174 Query: 175 ---AEHGAT--EHHRRSFGPVKRALG 195 ++G R + K L Sbjct: 175 KNALKNGINIDSIVRHQWKTYKSMLN 200 >UniRef50_B8C6T8 Ribonuclease n=1 Tax=Thalassiosira pseudonana RepID=B8C6T8_THAPS Length = 341 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 100/252 (39%), Gaps = 63/252 (25%) Query: 3 EFVYPHTQLVAGVDEVG-RGPLVGAVVTAAVIL--------------------------D 35 + Q V G D+ G G + G VV A+ L Sbjct: 88 DLHSRGYQFVIGSDDSGGAGCIAGPVVVASCCLLQPFSAVLPLDVSTKQSTAADKLLSQS 147 Query: 36 PARPIAGLNDSKKLSEKRRLALYEEIKEK--ALSWSLGRAEPHEIDELNILHATMLAMQR 93 +A +NDSK L+ ++R+ +Y I + S+ + P EID++N+ AT LA Sbjct: 148 EMEIMAIVNDSKTLTPQQRIDVYNVICAHPDVFAVSVAQRSPQEIDDINLTRATQLAFAE 207 Query: 94 AVA------GLHIAPEYVLIDGNRCPKL---------------------------PMPAM 120 ++ L Y ++DG PKL Sbjct: 208 SIESLVENYNLPFDKIYAIVDGKVSPKLYALQSSDTESSMQQQQSTQQSQQAAPKRFSVR 267 Query: 121 AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHG-A 179 GD+ V ++ +SI+A+V+RDA +A L +P YGF ++ GY + H+E + G Sbjct: 268 PYTNGDANVFTVALSSIVARVSRDAIIAELHDQYPSYGFDENLGYGSREHVEAVHRLGAL 327 Query: 180 TEHHRRSFGPVK 191 T HR SF VK Sbjct: 328 TGVHRLSFKQVK 339 >UniRef50_Q7ZUZ9 Ribonuclease n=9 Tax=Coelomata RepID=Q7ZUZ9_DANRE Length = 307 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 76/225 (33%), Gaps = 38/225 (16%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIK 62 G+DE GRGP++G +V + DSK L+E R L+ ++ Sbjct: 25 KTEDCCLGIDEAGRGPVLGPMVYGICFCPVSRKEDLKNLKVADSKTLTEAERENLFVKLD 84 Query: 63 E--KALSWSLGRAEPHEID-------ELNILHATMLAMQRAVA---GLHIAPEYVLIDGN 110 E + W+L P+ I + N+ + A V + + V +D Sbjct: 85 EAKSFVGWALQILSPNMISTSMLQRAKYNLNALSHDAAIGLVQYALDSGVQLKEVFVDTV 144 Query: 111 ------------RCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAAL--DIVFPQ 156 R P + + K DS P +SAASI AKV RD + + Sbjct: 145 GPAEKYQDKLSQRFPGVEVTVRP--KADSLFPIVSAASICAKVARDHAVKSWKFAEDLGD 202 Query: 157 YGFAQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 GYP + G + R S+ + L Sbjct: 203 VDTDYGSGYPNDPKTKSWLLKYLDPVFGYPQFVRFSWSTAQTLLD 247 >UniRef50_UPI0001C41F2F ribonuclease HII RnhB n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41F2F Length = 219 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 31/209 (14%) Query: 13 AGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIKEKALSW 68 G+DE GRGP++G +V A +++ + G+ DSK+++ KRR LY ++ + Sbjct: 4 LGLDEAGRGPVLGPMVVAGIVIPEKKEKIIERMGVKDSKRITPKRRAVLYRKLTRM-FDY 62 Query: 69 SLGRAEPHEIDEL-----NILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMP----- 118 +ID L N+ LAM R +A L + ++ID + + Sbjct: 63 ETVEISAKDIDLLRAKGVNLNQIEKLAMMRIIAKL--KADTIIIDSLDIKEGRLEEEMQN 120 Query: 119 -------AMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFP---QYGFAQHKGYPTA 168 +A K D + + AASI+AK RD + ++ + GYP+ Sbjct: 121 FVGEGSKVIAEHKADDKYIVVGAASIIAKTKRDEIINQINKEYIRSTGNKDGIGSGYPSD 180 Query: 169 FHLEKLAEHG----ATEHHRRSFGPVKRA 193 + ++ + RRS+G V+R Sbjct: 181 PKTKNFLKNYKYDEMPDFVRRSWGTVQRI 209 >UniRef50_A8NUD1 Ribonuclease n=2 Tax=Agaricales RepID=A8NUD1_COPC7 Length = 308 Score = 159 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 75/227 (33%), Gaps = 42/227 (18%) Query: 9 TQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIKEK 64 + GVDE GRGP++G +V G DSK L+ R +L + Sbjct: 39 GPYILGVDEAGRGPVLGPLVYGVAYCPVAYKETLEELGFADSKTLTADTRSSLISTLCSD 98 Query: 65 --ALSWSLGRAEPHEID---------ELN-ILHATMLAMQRAVAGLHIAPEYVLIDGNR- 111 L WS+ P I LN + + R V I V +D Sbjct: 99 PSNLGWSVRVIAPQAISSGMLKKPPTNLNKQSQDATIGLIRQVIDKGINVTEVYVDALGN 158 Query: 112 -----------CPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQ---- 156 P + K DS+ + AAS+ AKVTRD + Sbjct: 159 TSTYEAYLSSLFPGIDFTV--ANKADSKFKIVGAASVAAKVTRDVCIEEWVFEEDGGNAK 216 Query: 157 --YGFAQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 + A GYP+ + + + G + R S+ VK L Sbjct: 217 SKWSKALGSGYPSDPNTQAWLKNAVDPVFGFPKIVRFSWSTVKVVLD 263 >UniRef50_A2BL34 Ribonuclease HII n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=RNH2_HYPBU Length = 240 Score = 159 bits (404), Expect = 4e-38, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 27/211 (12%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEI 61 + G+DE GRGP++G +V V + G+ DSK+L+ R LY EI Sbjct: 3 RRRCRYAIGIDEAGRGPVIGPMVVVGVAVCSNDIDKLVALGVRDSKQLTPVVRAKLYGEI 62 Query: 62 KEKALSWSLGRAEPHEIDELNILH---ATMLAMQRAVAGLHIAPEYVLIDGNRCPK---- 114 AL + + P +D +N+ T + +AG+H +PE V +D P+ Sbjct: 63 LRVALHSVIVKLPPALLDAVNLNQLEVETFEYIASRIAGVHDSPEAVYVDAVGSPEKLAA 122 Query: 115 -----LPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAF 169 L + +A D P +SAASI+AKV RDAE+ L ++ + GYPT Sbjct: 123 RLSGRLGVRVIAEPGADKTYPIVSAASIVAKVVRDAEIRMLRRLYGV----RGSGYPTDP 178 Query: 170 HLEKLA--EH-----GATEHHRRSFGPVKRA 193 E+ RR++ +KR Sbjct: 179 ETIAWLAEEYRRNPANPPWFVRRTWSTLKRI 209 >UniRef50_B7FSR6 Ribonuclease n=2 Tax=Bacillariophyta RepID=B7FSR6_PHATR Length = 393 Score = 159 bits (402), Expect = 7e-38, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 81/226 (35%), Gaps = 38/226 (16%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVI---LDPARPIAGLNDSKKLSEKRRLALYEEIK 62 +V G+DE GRG ++G +V A D R NDSK+LSE +R L +I Sbjct: 107 RNKQGVVVGIDEAGRGSILGPMVYGAAFWNPCDEDRIPNDFNDSKQLSEDKRAMLLHKIM 166 Query: 63 --EKALSWSLGRAEPHEIDE-------LNILHATMLAMQRAVAGL---HIAPEYVLIDGN 110 + +++ EI N+ + A + L + ID Sbjct: 167 YDTPEMGFAVRVLHASEISRNMLRTESYNLNQMSHDAAAGIIEHLLEAGVQIGACFIDTV 226 Query: 111 R------------CPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMA--ALDIVFPQ 156 P + + K D++ P SA S++AK RD M + + Sbjct: 227 GNADHYKRRLQQEFPGIDFTVES--KADAKYPPCSAGSVVAKNVRDRMMESFQYSEMSLK 284 Query: 157 YGFAQHKGYPTAFHLEKLAE-------HGATEHHRRSFGPVKRALG 195 GYP+ + E G + R S+ P K+AL Sbjct: 285 RDPKFGSGYPSDPVCKDWMENNQNCKVFGYPDVVRFSWNPAKKALE 330 >UniRef50_A1RYM0 Ribonuclease HII n=1 Tax=Thermofilum pendens Hrk 5 RepID=RNH2_THEPD Length = 213 Score = 159 bits (402), Expect = 7e-38, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 86/213 (40%), Gaps = 35/213 (16%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIA----GLNDSKKLSEKRRLALYEEIKEKALS 67 VAG+DE GRGP++G +V A V+ + G+ DSK LS +RRL L I S Sbjct: 4 VAGIDEAGRGPMLGPMVVAIVVCPEEKVPLLRNMGVRDSKALSPRRRLLLSRAIPSVGCS 63 Query: 68 WSLGRAEPHEID---------ELNILHATMLAMQRAVAGLHIAPEYVLIDG--------- 109 + EP EID LN L A + A E V +D Sbjct: 64 VKVRVVEPQEIDCAVRGECYENLNHLEAAVFAQLINEVLSEGELEVVYMDSPDPVPSRFE 123 Query: 110 ---NRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYP 166 K + +A D + + AASI+AK TRD + AL + +G GYP Sbjct: 124 ERVRALLKGQVRIVAENGADEKYTIVGAASIVAKETRDEIINALKKTYGDFG----SGYP 179 Query: 167 TAFHL-----EKLAEHG-ATEHHRRSFGPVKRA 193 + E + +HG R+ + KR Sbjct: 180 SDPRTLRFAEEWVRKHGEPPPIARKEWATWKRL 212 >UniRef50_B5JFA5 Ribonuclease n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFA5_9BACT Length = 250 Score = 157 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 77/220 (35%), Positives = 106/220 (48%), Gaps = 39/220 (17%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDP--------ARPIAGLNDSKKLSEKRRLALYEEIK- 62 + G+DE GRG L G VV AAV R + +NDSK LS +R LY +++ Sbjct: 20 LIGIDEAGRGALAGPVVAAAVAAKEGFYDSEWCKRNASSINDSKLLSLAQREELYAKLRW 79 Query: 63 ---EKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPE---------------- 103 E + +G+ EI++LNIL AT AM+RAV + + Sbjct: 80 LEREGRILIGVGKGSISEIEDLNILGATQAAMKRAVEEILEQGDISPHDPDPLFDAALGG 139 Query: 104 ---------YVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVF 154 +L+DG L AVVKGDS+ I+ ASI+AKVTRD M ALD + Sbjct: 140 EPRETLSQWRLLVDGKPMKHLGFKHEAVVKGDSKSLCIAMASIIAKVTRDRIMMALDCEY 199 Query: 155 PQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRAL 194 P Y A KGY T H + ++G T+ HR F +++ L Sbjct: 200 PHYDLASSKGYATVLHRTAILDNGPTKIHRPLF--LRKLL 237 >UniRef50_Q54D13 Ribonuclease H2 subunit A n=1 Tax=Dictyostelium discoideum RepID=RNH2A_DICDI Length = 289 Score = 157 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 88/228 (38%), Gaps = 40/228 (17%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG----LNDSKKLSEKRRLALYEEIK 62 V G+DE GRGP++G +V ++ NDSKKL+E++R L++++ Sbjct: 17 KSEPFVMGIDEAGRGPVMGPMVYGCCYAPISKSTTLKSMKFNDSKKLTEQQRDQLFDKMG 76 Query: 63 EKA--LSWSLGRAEPHEIDE---------LN-ILHATMLAMQRAVAGLHIAPEYVLIDGN 110 E L++ + E LN I H + + + R+V + + + +D Sbjct: 77 ESNKILAYETDVITAEILSEKMLYKKPISLNVISHESAIGLIRSVLKKGVNVQELYLDTV 136 Query: 111 RCPKLPM-----------PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVF----- 154 P + K DS P +SAASI AKV RD E+ + + Sbjct: 137 GPPDKYQLMLKKLFPEIGKIIVSKKADSLYPIVSAASIAAKVVRDFEITNKNFDYLNIYD 196 Query: 155 --PQYGFAQHKGYPTAFHLEKL------AEHGATEHHRRSFGPVKRAL 194 Q GYP+ +K G R S+ + A+ Sbjct: 197 QDEQLSTDFGSGYPSDPLSKKWLVKNRDKVFGYPNFIRFSWKTTETAM 244 >UniRef50_Q53QG3 Ribonuclease n=2 Tax=Oryza sativa RepID=Q53QG3_ORYSJ Length = 298 Score = 157 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 83/221 (37%), Gaps = 37/221 (16%) Query: 5 VYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAG----LNDSKKLSEKRRLALYEE 60 + G+DE GRGP++G +V + + DSK L E++R L+E Sbjct: 9 WATKEPCLMGIDEAGRGPVLGPMVYGCMYCARSYQDTLATLKFADSKTLKEEQREELFES 68 Query: 61 IKEK-ALSWSLGRAEPHEID---------ELN-ILHATMLAMQRAVAGLHIAPEYVLIDG 109 +K+ ++ W + P E+ LN I H + + + + + + V ID Sbjct: 69 LKDNSSIGWEVDVICPKELSAKMLKRSKVNLNEISHNSAMGLVKRALDMGVLLAEVYIDT 128 Query: 110 N------------RCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAAL--DIVFP 155 + P + + K DS P +S ASI++KVTRD + D Sbjct: 129 VGDAEKYRIKLTEKFPGIKF--VVAKKADSLFPVVSGASIVSKVTRDRALRNWVFDETAQ 186 Query: 156 QYGFAQHKGYPTAFHLEKLAE------HGATEHHRRSFGPV 190 GYP ++ E G R S+G Sbjct: 187 NMHMNTGSGYPGDPSTKQWLEDHKHPIFGFPSLVRFSWGTC 227 >UniRef50_C4VBD8 Ribonuclease n=1 Tax=Nosema ceranae BRL01 RepID=C4VBD8_NOSCE Length = 235 Score = 157 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 28/213 (13%) Query: 4 FVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKE 63 +++ GVDE GRGP++G +V ++ + L DSK L+EK R ++ +K+ Sbjct: 11 LKKSDKRVIVGVDEAGRGPVIGYMVYCVMVFEVDNVPKNLKDSKMLTEKMRNDIFVTLKD 70 Query: 64 KALSWSLGR---AEPHEIDELN---ILHATMLAMQRAVAGLHIAPEYVLIDG-------N 110 +++ + +N I T+L + + V + E + ID Sbjct: 71 YNYAYTALHPSYITTKMLSNVNLNDISWNTVLNLLKLVCNAYTNIEGIFIDAIGTCDKLK 130 Query: 111 RCPKLPMPAMAVV--KGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTA 168 +L + V K DS+ P +S ASI+AKVTRD ++ + + GYP+ Sbjct: 131 EFLELNIKHKCTVESKADSKYPVVSGASIVAKVTRDDLLSK-------FNISFGSGYPSD 183 Query: 169 FHLEKLAE------HGATEHHRRSFGPVKRALG 195 +K G + R ++ K LG Sbjct: 184 PVTKKWLTKEVNYIFGWGKSVRYTWNTAKNILG 216 >UniRef50_Q4JA60 Ribonuclease HII n=12 Tax=Sulfolobaceae RepID=RNH2_SULAC Length = 212 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 24/203 (11%) Query: 11 LVAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIKEKAL 66 ++ G+DE GRG L+G +V A V +D G+ DSKKL+ K+R L+ I E + Sbjct: 2 ILVGIDEAGRGSLIGPMVVAGVAIDSNFLKFLSEIGVKDSKKLTRKKREYLFGVILEYSY 61 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIA-PEYVLIDGNR--------CPKLPM 117 + SL +A P EID N+ T AM + + + + P V +D + Sbjct: 62 AISLVKAYPEEIDSENLNEITYRAMIQIIHSMSVYNPSIVTVDKVGNASAVEREIININS 121 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 D + E+SAASI+AKV RD + L + +G GYP + + Sbjct: 122 SPRVENNADVKYVEVSAASIIAKVVRDNIINELKKTYGDFG----SGYPGDKKTVEWIKD 177 Query: 178 GAT-------EHHRRSFGPVKRA 193 + RRS+ ++ Sbjct: 178 LYSRQPTYALPIIRRSWKILQDI 200 >UniRef50_A0ZZY2 Ribonuclease n=11 Tax=Bifidobacteriaceae RepID=A0ZZY2_BIFAA Length = 264 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 103/222 (46%), Gaps = 43/222 (19%) Query: 6 YPHTQLVAGVDEVGRGPLVGAVVTAAVIL--------DPARPIAGLNDSKKLSEKRRLAL 57 ++ G DEVGRG L G V+ A + P G+ DSK L+E RR A+ Sbjct: 43 ASGYDVIVGFDEVGRGSLAGPVMVGAAAIRTCDLSGPSPLAVPDGVADSKMLTEHRREAI 102 Query: 58 YEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRC----- 112 +EE+K SW++G A EID+ I +A +A RA L A + IDGN Sbjct: 103 FEELKSWCASWAVGSASNTEIDDWGISYALGVAALRA---LSEAETRLGIDGNGLLDGRP 159 Query: 113 -----------------------PKLPMPAM--AVVKGDSRVPEISAASILAKVTRDAEM 147 P +P+PA VKGD ++ A+++AKVTRD M Sbjct: 160 VKVGAILDGPNDYITKALNTFDAPDVPVPAEVSTKVKGDRYCATVATAAVIAKVTRDRLM 219 Query: 148 AALDI--VFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSF 187 L + Y +A +KGY +A H + +AE G ++ HR S+ Sbjct: 220 VELGAQPQYEPYEWAHNKGYGSAAHRDAIAEFGPSDLHRLSW 261 >UniRef50_A8MAH5 Ribonuclease HII n=2 Tax=Thermoproteaceae RepID=RNH2_CALMQ Length = 209 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 79/201 (39%), Gaps = 22/201 (10%) Query: 11 LVAGVDEVGRGPLVGAVVTAAV-ILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWS 69 L AG+DE GRGP++G +V A V + G+ DSK+L+ R LY+ I KA Sbjct: 7 LEAGIDEAGRGPVIGPMVIAIVGWSNSEAEGIGVKDSKQLTPSGRSRLYKLIVSKAPCVR 66 Query: 70 LGRAEPHEID---ELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPM--------- 117 EP EID +L+ + V +D Sbjct: 67 HVIVEPSEIDYYVNRGLLNELEAIKMSELIKACSGVTRVYVDSPDPNPSRFRGFINVKDV 126 Query: 118 PAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEH 177 + + D +P +SAASI+AKV RD ++ L + +G GYP+ Sbjct: 127 ELIVLNHADESIPLVSAASIVAKVIRDTIISRLKETYGDFG----SGYPSDPRTISALRR 182 Query: 178 GA-----TEHHRRSFGPVKRA 193 RRS+ +KR Sbjct: 183 WINNGTLPPIVRRSWRTIKRM 203 >UniRef50_Q9P5X8 Ribonuclease H2 subunit A n=26 Tax=Leotiomyceta RepID=RNH2A_NEUCR Length = 317 Score = 156 bits (396), Expect = 3e-37, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 89/234 (38%), Gaps = 44/234 (18%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN------DSKKLSEKRRLA 56 + + +T GVDE GRGP++G +V +A L L DSK L+ RL+ Sbjct: 36 QLLADNTPCCLGVDEAGRGPVLGPMVYSAFYLPLTLSDPLLKQKHSFDDSKVLTPAVRLS 95 Query: 57 LYEEIK------EKALSWSL------------GRAEPHEIDELN-ILHATMLAMQRAVAG 97 L +E+ ++ +A +I LN +A+ + + Sbjct: 96 LMKELCTKDTELHDNCGYATSSLSPLSISSGMLKASKAQIYNLNQQAMDATIALIKGIYE 155 Query: 98 LHIAPEYVLIDGNRCPKLPMPAMAVV----------KGDSRVPEISAASILAKVTRDAEM 147 + + ID P + V K DS P +SAAS++AKVTRD Sbjct: 156 RGVNVTDIFIDTIGQPAAYQKKLERVFPTAKITVAKKADSLYPVVSAASVVAKVTRD--- 212 Query: 148 AALDIVFPQYGFAQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 AL++++ A GYP+ + G R S+G K L Sbjct: 213 IALEVLWADRTMAWGSGYPSDSKCVSWLKQNMHPVFGWGPECRFSWGTAKDMLE 266 >UniRef50_C8PNM3 Ribonuclease n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PNM3_9SPIO Length = 165 Score = 156 bits (394), Expect = 5e-37, Method: Composition-based stats. Identities = 58/163 (35%), Positives = 74/163 (45%), Gaps = 17/163 (10%) Query: 47 KKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLH------- 99 KKLS KRR I E AL W + P ID++NIL AT+ AM+ A L Sbjct: 4 KKLSPKRRETARAAILEGALYWHIASMPPDLIDKINILQATLAAMKEAFDRLFARYRRDS 63 Query: 100 -------IAPEYVLIDGNRCPKL--PMPAMAVVKGDSRVPEISAASILAKVTRDAEMAAL 150 V++DGN+ P + A K D R P + AASILAK RD M Sbjct: 64 IGKTADIEKSLTVIVDGNQLPDIHGDFNLTAEPKADGRYPCVMAASILAKTERDRCMMEY 123 Query: 151 DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRA 193 +P Y + HKGY T H + +GA+ R SF K+ Sbjct: 124 HKQYPLYRYDLHKGYGTKLHRSLIEVYGASPIQRHSF-TFKKV 165 >UniRef50_Q6C813 Ribonuclease n=1 Tax=Yarrowia lipolytica RepID=Q6C813_YARLI Length = 315 Score = 155 bits (393), Expect = 7e-37, Method: Composition-based stats. Identities = 57/231 (24%), Positives = 82/231 (35%), Gaps = 43/231 (18%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVIL-----DPARPIAGLNDSKKLSEKRRLALYEEI 61 PH + GVDE GRGP++G++V D G DSK L+ ++R AL EI Sbjct: 38 PHKPCILGVDEAGRGPVLGSMVYGLAYCTKEFADEELSKTGFADSKTLTAEKRSALMREI 97 Query: 62 KE-----KALSWSLGRAEPHEIDE----------LNIL---HATMLAMQRAVAGLHIAPE 103 + L W +I N+ H T +A+ + V + Sbjct: 98 CCDETLVEHLGWCTTSMTAQDISSAMLRPMSRGVYNLNDQAHDTTMALIQGVLDRGVLLT 157 Query: 104 YVLIDGNRCPKLP----------MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIV 153 ID P + K DS P +SAASI AKVTRD ++ + D+ Sbjct: 158 EAYIDTVGPPASYTAKLSKQFPHIKFTVTKKADSLFPIVSAASICAKVTRDMDLKSQDLS 217 Query: 154 FPQYGFAQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALGLAS 198 GYP+ + G R S+ K + Sbjct: 218 EG----TWGSGYPSDPKTSVWLKSHVDQVFGWMPVVRFSWQTAKDLVEKEE 264 >UniRef50_Q10236 Ribonuclease H2 subunit A n=2 Tax=Schizosaccharomyces RepID=RNH2A_SCHPO Length = 326 Score = 155 bits (393), Expect = 7e-37, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 84/232 (36%), Gaps = 38/232 (16%) Query: 3 EFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPI--AGLNDSKKLSEKRRLALYEE 60 + + GVDE GRGP++G +V A + G DSK L+ +R L + Sbjct: 56 DDISKSQPYRLGVDEAGRGPVLGPMVYAVAYCPVDFDLTNYGFADSKTLASLKREELLKL 115 Query: 61 IKEKA------LSWSLGRAEPHEI--------DELNIL---HATMLAMQRAVAGLHIAPE 103 I K+ + WS E+ ++ N+ H T + + + V I Sbjct: 116 ICNKSNELGKNVGWSTMSISARELAAGMLRYRNKYNLNLQAHDTTIDLIKKVYESGINVT 175 Query: 104 YVLIDGNRCP---------KLPMPAMAVV-KGDSRVPEISAASILAKVTRDAEMAALDIV 153 + +D P P + V K DS P +S ASI AKVTRD ++ Sbjct: 176 EIYVDTVGPPISYQEKLQAHFPQAKVTVTKKADSLFPIVSLASICAKVTRDIQLECARES 235 Query: 154 FPQYGFAQHKGYPTAFHLEKLAE------HGAT-EHHRRSFGPVKRALGLAS 198 GY + + + G + R S+ K L L S Sbjct: 236 I--RTENWGSGYSSDARTTEWLKVNVDKIFGWKGDIVRYSWKTAKDLLELPS 285 >UniRef50_Q8SSA4 Ribonuclease n=1 Tax=Encephalitozoon cuniculi RepID=Q8SSA4_ENCCU Length = 239 Score = 155 bits (392), Expect = 8e-37, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 32/213 (15%) Query: 8 HTQLVAGVDEVGRGPLVGAVVTAAVILDPA-RPIAGLNDSKKLSEKRRLALYEEIKEKAL 66 ++V G+DE GRGP+VG +V A+++ G DSK L+ +R ++ IK+K Sbjct: 15 EEEVVVGIDEAGRGPVVGYMVYGALVVPRGVLEDVGFKDSKVLTPAQRYNFFQMIKKKGF 74 Query: 67 SWSLGRAEPHEIDELNILHATMLAMQRA---------VAGLHIAPEYVLIDGNRC----- 112 ++ + P I E+ + + L V + + +D Sbjct: 75 GYAYHCSHPDYITEMMQVRSVSLNEVSIGSVLRILDEVQSKCRRVDTIYVDALGDCRKYK 134 Query: 113 ----PKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTA 168 P + + DS+ +S ASI+AKV RD ++ ++G GYP+ Sbjct: 135 ERLEKDYPYRFVVEERADSKFQVVSGASIVAKVQRDMLIS-------EFGEDLGSGYPSD 187 Query: 169 FHLEKLAE------HGATEHHRRSFGPVKRALG 195 + G R S+ VK+ LG Sbjct: 188 PETIRWLRKNINVVFGFPPGVRYSWATVKKMLG 220 >UniRef50_Q1AW72 Ribonuclease n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW72_RUBXD Length = 204 Score = 155 bits (392), Expect = 9e-37, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 92/179 (51%), Gaps = 3/179 (1%) Query: 12 VAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLG 71 VAGVDE GRG L G +V AAVILD + GL+DSK+L+ R L E+ A + S+ Sbjct: 27 VAGVDEAGRGALAGPLVAAAVILD-GGVVEGLDDSKRLARPARERLLPEVLGSAEALSVV 85 Query: 72 RAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPE 131 IDE + A ++RAV L L DGN +L + D R Sbjct: 86 VFPAWWIDEHGLGAANREVLRRAVGRLLPRAGCCLADGN--LRLGPRIDCLPGADGRSAA 143 Query: 132 ISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPV 190 ++AAS++AKV RDA M+AL P YGF ++ GY T H LA G HR S+ V Sbjct: 144 VAAASVVAKVLRDAAMSALGAAHPGYGFERNCGYGTPEHRRALARLGPCRVHRLSYAGV 202 >UniRef50_Q9U6P6 Ribonuclease H2 subunit A n=2 Tax=Caenorhabditis RepID=RNH2A_CAEEL Length = 297 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 42/229 (18%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPI----AGLNDSKKLSEKRRLALYEEIK 62 V G+DE GRGP++G +V AA I + + G++DSK L+E +R ++ ++ Sbjct: 18 NGIPCVLGIDEAGRGPVLGPMVYAAAISPLDQNVELKNLGVDDSKALNEAKREEIFNKMN 77 Query: 63 EKA-----LSWSLGRAEPHEID-------ELNILHATMLAMQRAVAG---LHIAPEYVLI 107 E ++++L P I + ++ + A + ++ + + Sbjct: 78 EDEDIQQIIAYALRCLSPELISCSMLKRQKYSLNEVSHEAAITLIRDALACNVNVVEIKV 137 Query: 108 DGNRCPKLP-------MPAMAVV---KGDSRVPEISAASILAKVTRDAEMAALDIVF--- 154 D P +++ K DS P +SAASI AKVTRD+ + Sbjct: 138 DTVGPKATYQAKLEKLFPGISICVTEKADSLFPIVSAASIAAKVTRDSRLRNWQFREKNI 197 Query: 155 --PQYGFAQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 P G+ GYP + +K + G R S+ + Sbjct: 198 KVPDAGY--GSGYPGDPNTKKFLQLSVEPVFGFCSLVRSSWKTASTIVE 244 >UniRef50_Q9VPP5 Ribonuclease H2 subunit A n=38 Tax=Eukaryota RepID=RNH2A_DROME Length = 347 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 60/228 (26%), Positives = 87/228 (38%), Gaps = 41/228 (17%) Query: 7 PHTQLVAGVDEVGRGPLVGAVVTAAVILD----PARPIAGLNDSKKLSEKRRLALYEEIK 62 + GVDE GRGP++G +V A G DSK+L+E +R ++ +I Sbjct: 67 KDKPCMLGVDEAGRGPVLGPMVYGISYCPLESNKALEDLGCADSKQLTEGKRDIIFNDIN 126 Query: 63 EK-----ALSWSLGRAEPHEI------------DELNILHATMLAMQRAVAGLHIAPEYV 105 K + W++ P+ I +E+++ A L Q AG++IA YV Sbjct: 127 TKEYATSCVGWAVEIISPNTISTSMYRRSKCSLNEVSMDSAMGLIQQAIDAGVNIAEVYV 186 Query: 106 LIDG-------NRCPKLP-MPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQY 157 G + P K DS P +SAASI AKVTRD + FP+ Sbjct: 187 DTVGPPEKYQEKLLKRFPSFKITVAKKADSTYPIVSAASICAKVTRDHALKVWS--FPEG 244 Query: 158 ----GFAQHKGYPTAFHLEKLAE------HGATEHHRRSFGPVKRALG 195 GYP + G R S+ + AL Sbjct: 245 LVIKDNEFGSGYPGDPVTRRFLTEYIDLVFGFPRLVRFSWSTAENALA 292 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.168 0.523 Lambda K H 0.267 0.0513 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,501,528,000 Number of Sequences: 3077464 Number of extensions: 72393505 Number of successful extensions: 190918 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 969 Number of HSP's successfully gapped in prelim test: 144 Number of HSP's that attempted gapping in prelim test: 187819 Number of HSP's gapped (non-prelim): 1210 length of query: 198 length of database: 1,040,396,356 effective HSP length: 122 effective length of query: 76 effective length of database: 664,945,748 effective search space: 50535876848 effective search space used: 50535876848 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 90 (39.0 bits)