BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (297 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P31449 Uncharacterized HTH-type transcriptional regulat... 624 e-177 UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=P... 83 1e-14 UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp.... 81 4e-14 UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bactero... 78 4e-13 UniRef50_A6C8L8 Helix-turn-helix, AraC type n=1 Tax=Planctomyces... 77 5e-13 UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococ... 77 9e-13 UniRef50_UPI000174610C response regulator receiver domain protei... 75 2e-12 UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=P... 73 1e-11 UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=C... 73 1e-11 UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family prot... 73 1e-11 UniRef50_Q47XU2 Transcriptional regulator, AraC family n=1 Tax=C... 72 3e-11 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 71 5e-11 UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=D... 70 8e-11 UniRef50_Q0SVI3 DNA-binding response regulator, AraC family n=9 ... 69 1e-10 UniRef50_B9KTR6 Transcriptional regulator, AraC family n=2 Tax=R... 69 2e-10 UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 ... 69 2e-10 UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=La... 69 3e-10 UniRef50_UPI0001C34C27 transcriptional regulator, AraC family pr... 69 3e-10 UniRef50_A6VZ04 Helix-turn-helix-domain containing protein AraC ... 68 3e-10 UniRef50_D1N947 Transcriptional regulator, AraC family n=1 Tax=V... 68 3e-10 UniRef50_C6D7G4 Transcriptional regulator, AraC family n=1 Tax=P... 68 3e-10 UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevi... 68 4e-10 UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=L... 68 4e-10 UniRef50_A3TV05 Putative transcriptional regulator n=1 Tax=Ocean... 68 4e-10 UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C... 68 4e-10 UniRef50_C4DTW1 Transcriptional regulator containing an amidase ... 68 5e-10 UniRef50_B0KFJ0 Transcriptional regulator, AraC family n=2 Tax=P... 68 5e-10 UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P... 67 5e-10 UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabac... 67 5e-10 UniRef50_C7MF03 DNA-binding domain-containing protein, AraC-type... 67 6e-10 UniRef50_A4BIK9 AraC-type DNA-binding domain-containing protein ... 67 6e-10 UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10 Tax=... 67 7e-10 UniRef50_A0L3B8 Transcriptional regulator, AraC family n=2 Tax=G... 67 7e-10 UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bactero... 67 8e-10 UniRef50_B9K0A2 Transcriptional regulator AraC family n=18 Tax=R... 67 8e-10 UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=P... 67 9e-10 UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 T... 67 1e-09 UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides R... 67 1e-09 UniRef50_A0Z695 Transcriptional regulator, AraC family protein n... 66 1e-09 UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n... 66 1e-09 UniRef50_A9WHL1 Helix-turn-helix-domain containing protein AraC ... 66 1e-09 UniRef50_C9D180 Helix-turn-helix-domain containing protein, AraC... 66 2e-09 UniRef50_Q3M1N4 Transcriptional Regulator, AraC family n=1 Tax=A... 66 2e-09 UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Ta... 66 2e-09 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 65 3e-09 UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon tra... 65 3e-09 UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=P... 65 3e-09 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 65 3e-09 UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella ori... 65 3e-09 UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=P... 65 4e-09 UniRef50_D0DCB7 Helix-turn-helix-domain containing protein, AraC... 65 4e-09 UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n... 65 4e-09 UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecali... 65 4e-09 UniRef50_B6R353 Phosphoribosylaminoimidazole carboxylase, ATPase... 64 5e-09 UniRef50_A7NLR2 Transcriptional regulator, AraC family n=2 Tax=C... 64 5e-09 UniRef50_Q1QYW4 Transcriptional regulator, AraC family with amid... 64 6e-09 UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostri... 64 6e-09 UniRef50_B8CZL9 Response regulator receiver protein n=1 Tax=Halo... 64 6e-09 UniRef50_A0B2M7 Transcriptional regulator, AraC family with amid... 64 7e-09 UniRef50_B2S6F3 Transcriptional regulator, ARAC family n=48 Tax=... 64 7e-09 UniRef50_Q2CGL8 Transcriptional regulator, AraC family protein n... 64 7e-09 UniRef50_B1JB07 Transcriptional regulator, AraC family n=1 Tax=P... 64 7e-09 UniRef50_A8TRB7 Probable transcriptional regulator n=1 Tax=alpha... 64 7e-09 UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales ... 64 7e-09 UniRef50_A3W1D7 Transcriptional regulator, AraC family protein n... 64 7e-09 UniRef50_B4WW69 Transcriptional regulator, AraC family protein n... 64 8e-09 UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostri... 64 9e-09 UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=S... 64 9e-09 UniRef50_A3SJ23 Transcriptional regulator, AraC family protein n... 64 9e-09 UniRef50_B4D5Y6 Transcriptional regulator, AraC family n=1 Tax=C... 63 1e-08 UniRef50_B1F7R4 Transcriptional regulator, AraC family n=1 Tax=B... 63 1e-08 UniRef50_Q1QUP9 Transcriptional regulator, AraC family with amid... 63 1e-08 UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=J... 63 1e-08 UniRef50_C6BZV3 Transcriptional regulator, AraC family n=1 Tax=D... 63 1e-08 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 63 1e-08 UniRef50_C6CVX7 Transcriptional regulator, AraC family n=1 Tax=P... 63 2e-08 UniRef50_A6CZ62 Transcriptional Regulator, AraC family protein n... 62 2e-08 UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=P... 62 2e-08 UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=V... 62 2e-08 UniRef50_Q2BYZ8 Transcriptional regulator, AraC family protein n... 62 2e-08 UniRef50_D1N8U7 Transcriptional regulator, AraC family n=1 Tax=V... 62 2e-08 UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales ... 62 2e-08 UniRef50_A7VPJ2 Putative uncharacterized protein n=1 Tax=Clostri... 62 2e-08 UniRef50_A6E5Z6 Probable transcriptional regulator n=1 Tax=Roseo... 62 2e-08 UniRef50_Q0SE50 Transcriptional regulator, AraC family protein n... 62 2e-08 UniRef50_A1B7U6 Transcriptional regulator, AraC family n=5 Tax=A... 62 2e-08 UniRef50_C2AR01 DNA-binding domain-containing protein, AraC-type... 62 2e-08 UniRef50_B5XWK6 Transcriptional regulator, AraC family n=5 Tax=K... 62 2e-08 UniRef50_Q1GGF5 Transcriptional regulator, AraC family with amid... 62 3e-08 UniRef50_C0A9I7 AraC-type DNA-binding domain-containing protein-... 62 3e-08 UniRef50_C6B4M4 Transcriptional regulator, AraC family n=8 Tax=R... 62 3e-08 UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n... 62 3e-08 UniRef50_A8LK68 HTH-type transcriptional regulator n=43 Tax=Rhod... 62 3e-08 UniRef50_A9C0Z2 Transcriptional regulator, AraC family n=1 Tax=D... 62 3e-08 UniRef50_Q7UU29 Probable lactose operon transcription activator ... 62 3e-08 UniRef50_Q3IVG7 Transcriptional regulator, AraC family with amid... 62 3e-08 UniRef50_A7B5D7 Putative uncharacterized protein n=1 Tax=Ruminoc... 62 3e-08 UniRef50_D1N547 Transcriptional regulator, AraC family n=1 Tax=V... 61 4e-08 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 61 4e-08 UniRef50_D2PRH8 Transcriptional regulator, AraC family n=1 Tax=K... 61 4e-08 UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=C... 61 4e-08 UniRef50_Q2S8T9 AraC-type DNA-binding domain-containing protein ... 61 4e-08 UniRef50_P43465 Raffinose operon transcriptional regulatory prot... 61 4e-08 UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopi... 61 4e-08 UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales ... 61 5e-08 UniRef50_B2JCG9 Transcriptional regulator, AraC family n=52 Tax=... 61 5e-08 UniRef50_B9XCC3 Transcriptional regulator, AraC family n=1 Tax=b... 61 5e-08 UniRef50_C9YV93 Putative transcriptional regulator n=2 Tax=Strep... 61 5e-08 UniRef50_C6JDE0 Putative uncharacterized protein n=1 Tax=Ruminoc... 61 6e-08 UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostri... 61 6e-08 UniRef50_C1DME1 Transcriptional regulator AraC family n=1 Tax=Az... 60 6e-08 UniRef50_Q1QTP1 Transcriptional regulator, AraC family with amid... 60 7e-08 UniRef50_Q01W15 Transcriptional regulator, AraC family n=1 Tax=C... 60 7e-08 UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=... 60 7e-08 UniRef50_B4S2K8 Transcriptional regulator, AraC family protein n... 60 7e-08 UniRef50_D1W357 Transcriptional regulator, AraC family n=2 Tax=B... 60 8e-08 UniRef50_UPI0001789679 transcriptional regulator, AraC family n=... 60 8e-08 UniRef50_UPI0001788616 transcriptional regulator, AraC family n=... 60 8e-08 UniRef50_A7LRR5 Sensor protein n=2 Tax=Bacteroides RepID=A7LRR5_... 60 8e-08 UniRef50_C6D094 Transcriptional regulator, AraC family n=1 Tax=P... 60 9e-08 UniRef50_A8TQD3 Transcriptional regulator, AraC family protein n... 60 9e-08 UniRef50_Q1R055 Transcriptional regulator, AraC family with amid... 60 1e-07 UniRef50_B4D0H6 Transcriptional regulator, AraC family n=1 Tax=C... 60 1e-07 UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacilla... 60 1e-07 UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=D... 60 1e-07 UniRef50_B9NXI5 Transcriptional regulator, AraC family n=2 Tax=R... 60 1e-07 UniRef50_UPI0001C43064 probable transcriptional regulator n=1 Ta... 60 1e-07 UniRef50_D0YX71 Transcriptional regulator AraC family protein n=... 60 1e-07 UniRef50_Q2RUD8 Transcriptional regulator, AraC family n=1 Tax=R... 60 1e-07 UniRef50_B8DGU9 Transcriptional regulator, AraC family n=2 Tax=F... 60 1e-07 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 60 1e-07 UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1... 60 1e-07 UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=R... 60 1e-07 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 60 1e-07 UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto... 60 1e-07 UniRef50_C9A3L0 Transcriptional regulator n=1 Tax=Enterococcus g... 59 1e-07 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 59 1e-07 UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS fami... 59 1e-07 UniRef50_B6QZZ9 Transcriptional regulator, AraC family n=1 Tax=P... 59 1e-07 UniRef50_B9Y348 Putative uncharacterized protein n=1 Tax=Holdema... 59 1e-07 UniRef50_Q1MGU4 Putative AraC family transcriptional regulator n... 59 2e-07 UniRef50_A4Z280 Putative transcriptional regulator, AraC family ... 59 2e-07 UniRef50_D1N1T4 Transcriptional regulator, AraC family n=1 Tax=V... 59 2e-07 UniRef50_C6C8M9 Transcriptional regulator, AraC family n=44 Tax=... 59 2e-07 UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostri... 59 2e-07 UniRef50_D1NAQ6 Transcriptional regulator, AraC family n=1 Tax=V... 59 2e-07 UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=... 59 2e-07 UniRef50_A1WQ59 Transcriptional regulator, AraC family with amid... 59 2e-07 UniRef50_Q98JA7 Probable transcriptional regulator n=1 Tax=Mesor... 59 2e-07 UniRef50_D1N4A3 Transcriptional regulator, AraC family n=1 Tax=V... 59 2e-07 UniRef50_B5JKR9 Transcriptional regulator, AraC family protein n... 59 2e-07 UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=D... 59 2e-07 UniRef50_C5RDR5 Transcriptional regulator, AraC family n=2 Tax=C... 59 2e-07 UniRef50_C0DSD5 Putative uncharacterized protein n=1 Tax=Eikenel... 59 2e-07 UniRef50_A8IE82 Transcriptional regulator n=3 Tax=Alphaproteobac... 59 2e-07 UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=C... 59 2e-07 UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 T... 59 2e-07 UniRef50_D2PPT5 Transcriptional regulator, AraC family n=1 Tax=K... 59 2e-07 UniRef50_B9TGZ7 Putative uncharacterized protein n=1 Tax=Ricinus... 59 2e-07 UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=C... 59 2e-07 UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type... 59 2e-07 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 59 2e-07 UniRef50_Q1YY61 Hypothetical transcriptional regulator, AraC/Xyl... 59 2e-07 UniRef50_A3YAS0 Transcriptional regulator, AraC family protein n... 59 3e-07 UniRef50_C9P3F6 Signal transduction histidine kinase n=2 Tax=Vib... 59 3e-07 UniRef50_B1M000 Transcriptional regulator, AraC family n=7 Tax=M... 59 3e-07 UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacteriu... 59 3e-07 UniRef50_B5GM94 Helix-turn-helix domain-containing protein n=1 T... 58 3e-07 UniRef50_A7JVV0 Possible AraC family transcriptional regulator n... 58 3e-07 UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=C... 58 3e-07 UniRef50_B6AWE3 Transcriptional regulator, AraC family n=1 Tax=R... 58 3e-07 UniRef50_Q989Y4 Transcriptional regulator n=2 Tax=Rhizobiales Re... 58 3e-07 UniRef50_C8SL33 Transcriptional regulator, AraC family n=2 Tax=M... 58 3e-07 UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bactero... 58 4e-07 UniRef50_C1D8X9 Putative uncharacterized protein n=1 Tax=Laribac... 58 4e-07 UniRef50_D1XPD5 Transcriptional regulator, AraC family n=1 Tax=S... 58 4e-07 UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=L... 58 4e-07 UniRef50_Q2CGN3 Transcriptional regulator, AraC/XylS family prot... 58 4e-07 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 58 4e-07 UniRef50_Q89ME0 Transcriptional regulatory protein n=1 Tax=Brady... 58 4e-07 UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=B... 58 4e-07 UniRef50_A3YG62 Transcriptional regulator, AraC family protein n... 58 4e-07 UniRef50_Q7MDX7 AraC-type DNA-binding domain-containing protein ... 58 4e-07 UniRef50_D1N130 Transcriptional regulator, AraC family n=1 Tax=V... 58 4e-07 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 58 4e-07 UniRef50_C6CVN2 Transcriptional regulator, AraC family n=1 Tax=P... 58 4e-07 UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumil... 58 5e-07 UniRef50_A9D0S3 Transcription regulator n=3 Tax=Phyllobacteriace... 58 5e-07 UniRef50_Q01Y24 Transcriptional regulator, AraC family n=2 Tax=A... 58 5e-07 UniRef50_B9JE85 Transcriptional regulator protein n=1 Tax=Agroba... 58 5e-07 UniRef50_B7VRW6 Putative AraC-family transcriptional regulatory ... 58 5e-07 UniRef50_Q0FAD1 Transcriptional regulator, AraC family protein n... 58 5e-07 UniRef50_C6XTD1 Cyclic nucleotide-binding n=1 Tax=Pedobacter hep... 58 5e-07 UniRef50_Q2GAB8 Transcriptional regulator, AraC family n=1 Tax=N... 58 5e-07 UniRef50_C6VNH1 Transcription regulator n=3 Tax=Lactobacillus pl... 57 5e-07 UniRef50_A9FWP2 Transcriptional regulator, AraC family n=1 Tax=S... 57 5e-07 UniRef50_D1V7I4 Transcriptional regulator, AraC family n=2 Tax=A... 57 5e-07 UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas Re... 57 6e-07 UniRef50_B5WL81 Transcriptional regulator, AraC family n=1 Tax=B... 57 6e-07 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 57 6e-07 UniRef50_D0LBD5 Helix-turn-helix-domain containing protein AraC ... 57 6e-07 UniRef50_D1N7S2 Transcriptional regulator, AraC family n=2 Tax=V... 57 6e-07 UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n... 57 6e-07 UniRef50_Q1QE65 Transcriptional regulator, AraC family n=1 Tax=P... 57 6e-07 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 57 6e-07 UniRef50_A1AM63 Transcriptional regulator, AraC family n=1 Tax=P... 57 6e-07 UniRef50_Q9K6M6 Transcriptional regulator n=1 Tax=Bacillus halod... 57 7e-07 UniRef50_C7QI96 Transcriptional regulator, AraC family n=1 Tax=C... 57 7e-07 UniRef50_C1D3S3 Putative transcriptional regulator, AraC family ... 57 7e-07 UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=V... 57 7e-07 UniRef50_C2FW53 AraC family transcriptional regulator n=2 Tax=Sp... 57 7e-07 UniRef50_A8HRE8 Transcriptional regulator n=3 Tax=Alphaproteobac... 57 7e-07 UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C... 57 7e-07 UniRef50_C6CXM1 Transcriptional regulator, AraC family n=2 Tax=P... 57 8e-07 UniRef50_C6JDE2 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_3... 57 8e-07 UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostri... 57 8e-07 UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=G... 57 8e-07 UniRef50_C2AR91 DNA-binding domain-containing protein, AraC-type... 57 8e-07 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 57 8e-07 UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-... 57 8e-07 UniRef50_D1N759 Transcriptional regulator, AraC family n=1 Tax=V... 57 9e-07 UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=C... 57 9e-07 UniRef50_UPI000197B404 hypothetical protein BACCOPRO_02224 n=1 T... 57 9e-07 UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=D... 57 9e-07 UniRef50_C0Z8E4 Probable transcriptional regulator n=1 Tax=Brevi... 57 9e-07 UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=C... 57 9e-07 UniRef50_Q4A0B7 Putative transcriptional regulator n=1 Tax=Staph... 57 9e-07 UniRef50_B6W1X0 Sensor protein n=6 Tax=Bacteroides RepID=B6W1X0_... 57 9e-07 UniRef50_B5ZT32 Transcriptional regulator, AraC family n=9 Tax=R... 57 1e-06 UniRef50_C3JN73 Transcriptional regulator, AraC family n=1 Tax=R... 57 1e-06 UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=... 57 1e-06 UniRef50_C5BRT4 Helix-turn-helix-domain containing protein, AraC... 57 1e-06 UniRef50_B9Z8M5 Transcriptional regulator, AraC family n=1 Tax=L... 57 1e-06 UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C... 57 1e-06 UniRef50_Q1QSP4 Transcriptional regulator, AraC family with amid... 57 1e-06 UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostri... 57 1e-06 UniRef50_C5AH65 Transcriptional regulator, AraC family protein n... 57 1e-06 UniRef50_A1R3X3 Transcriptional regulator, AraC family domain n=... 57 1e-06 UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus s... 56 1e-06 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 56 1e-06 UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 T... 56 1e-06 UniRef50_A6LQ44 Helix-turn-helix-domain containing protein, AraC... 56 1e-06 UniRef50_A4WA52 Transcriptional regulator, AraC family n=10 Tax=... 56 1e-06 UniRef50_C0AA65 AraC-type DNA-binding domain-containing protein-... 56 1e-06 UniRef50_D1T3G0 Transcriptional regulator, AraC family n=1 Tax=A... 56 1e-06 UniRef50_C1D5R0 Activator protein MtlR n=1 Tax=Laribacter hongko... 56 1e-06 UniRef50_Q1QY53 Transcriptional regulator, AraC family n=1 Tax=C... 56 1e-06 UniRef50_C7G8V7 Putative raffinose operon transcriptional regula... 56 1e-06 UniRef50_C7PCD4 Transcriptional regulator, AraC family n=1 Tax=C... 56 1e-06 UniRef50_UPI000178A031 transcriptional regulator, AraC family n=... 56 1e-06 >UniRef50_P31449 Uncharacterized HTH-type transcriptional regulator yidL n=55 Tax=Enterobacteriaceae RepID=YIDL_ECOLI Length = 297 Score = 624 bits (1609), Expect = e-177, Method: Compositional matrix adjust. Identities = 297/297 (100%), Positives = 297/297 (100%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN Sbjct: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM Sbjct: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120 Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD Sbjct: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180 Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL Sbjct: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN Sbjct: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297 >UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSQ7_PAESJ Length = 285 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 28/281 (9%) Query: 17 NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76 NIP ++ E +W AD Y+V P P + +W +G G I L Sbjct: 18 NIPYVLEELPPQPPCRFQLIWKVQADIAYQVANPTGFSSPGLFATW------EGKGVITL 71 Query: 77 KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM---MDIPVGQQSVIYNG 133 EQ L I + P +Y C W+ Y++EF M +++PVG Sbjct: 72 -GSEQHELVAGTYIIVPPDTPTAYRCLNGNWKFYFLEFDSLDMALGLNLPVGI------- 123 Query: 134 EIYNQELTEVAELITSPEAIKNNLAV-----AFLTKIIYQWICLMYADGK---KDPQRRQ 185 + ++ E A + E + NNL + A+ + + Q + L++A + + + + Sbjct: 124 PVSTAKMAEAARMN---ERLINNLIMKPAGYAYDSHLAMQELLLLFARERHANRSGRHPE 180 Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 ++ ++ +H ++ Q + + S F TG +P +Y + +L A + L Sbjct: 181 LDDILYRMHQTIGQAFPIEKWVQQSGLSRNAFFTRFRERTGMSPNQYMQELKLAAAKTSL 240 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 + SV E+A L F+D FHFSK FK ++G +P A ++ Sbjct: 241 ETTQASVKEIAAALQFYDEFHFSKLFKKRYGMSPRAYRRDA 281 >UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EEZ9_9SPHI Length = 306 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/272 (23%), Positives = 117/272 (43%), Gaps = 24/272 (8%) Query: 30 GISLISLWHT-------YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82 G++++++ H Y D H+ ++ D K I + +Y +G G + + Sbjct: 24 GVNILNVGHNIHPGKLKYPDPHHPNLYCFDWSKGRILEEYQLIYIAKGSGTFESEQVGSV 83 Query: 83 TLHGNCIIFLKPMDIHSYHC---EGLVWEQYWMEFTPT-----SMMDIPVGQQSVIYNGE 134 +H ++ L P H Y EG WE+YW+ F + D +I+ G Sbjct: 84 VVHPGTVLLLFPNIWHRYKPHDDEG--WEEYWVGFNGSYASYLMQQDCFDPHAPLIHMG- 140 Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-----DPQRRQIEKL 189 +N E V + + + + Q + L+YA + D + + I + Sbjct: 141 -FNSEFINVFIRLIDTLKFEGVAFAQLSSSLTTQLLGLVYASALQKEKVMDRKEQVINNI 199 Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249 +H +L ++ ++A+ S AW R+ F G +P +Y L+ +L+ A ++++ Sbjct: 200 RYKIHENLSNCATLEELASQHNVSYAWFRKTFKEVVGVSPGQYQLNLKLEKAARMIRETQ 259 Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 S+ E+A F HFSK FK K G +PSA Sbjct: 260 MSISEIAFVNGFVSEHHFSKIFKKKMGVSPSA 291 >UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C7N6_9BACE Length = 292 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 25/280 (8%) Query: 14 TPYNIPLLINENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72 TPYNI L EN I+ + + + ++ +A+ H+R R+K N V +Y GCG Sbjct: 16 TPYNIRNLQRENNITKQLFVSHIGYYPHAENHFR---EREKG----TNENVFIYCESGCG 68 Query: 73 KILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTP--TSMMDIPVGQQSV 129 + K GE+ L N L + H+Y + + W YW+ F +M +G+ Sbjct: 69 WVSYK-GEKYILTKNQAFILPANEQHAYGADEVNPWSIYWLHFCGEGVAMFSSIIGKAIS 127 Query: 130 IYNGEIYN--------QELTEVAELITSPEAIK--NNLAVAFLTKIIYQWICLMYADGKK 179 + + +E+ + E+ SPE ++ + + FL + Y + + KK Sbjct: 128 LEESDKSRYDDRFQLFEEMYQNLEMGYSPENLEYVSFCLMHFLASLKY---INQFREIKK 184 Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239 + I+K I+ + +++ + ++ D+A + S + LF T P EYY ++ Sbjct: 185 VRETDFIQKSISFMKENMENKITLEDIAQHVGYSASHFSALFSERTSYAPMEYYNQLKIQ 244 Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 A S L+ + E+A L ++D FHFSKAF + P Sbjct: 245 RACSFLQFSDLKIKEIAFRLGYYDQFHFSKAFNKEMEITP 284 >UniRef50_A6C8L8 Helix-turn-helix, AraC type n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C8L8_9PLAN Length = 246 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 3/115 (2%) Query: 170 ICLMYADGKKDPQRR---QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226 + LM+ + + QRR ++ K++ + A+ Q ++++A + SE LRRLF G Sbjct: 127 VRLMFPEADRGTQRRLDDRLRKVVRLIEAAPDQNHRISELAEIVGLSEPHLRRLFREQMG 186 Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 ++PK++ R++ A L++Q+G VGEVA L F F FS ++ G+ PSA Sbjct: 187 ESPKQFLRRTRMEFARRLMQQEGLRVGEVAHLLGFASVFQFSAQYRQVLGHPPSA 241 >UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococcus RepID=MSMR_STRMU Length = 278 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 117/243 (48%), Gaps = 18/243 (7%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV--WEQYWME 113 P I +++V + ++G GK+ + G+ IFL P DI +++ L W W+ Sbjct: 35 PTIRDNYVIHFILEGKGKLTINQHTLDLAAGD--IFLLPKDISTFYQADLQMPWSYIWIG 92 Query: 114 FTPTSMMDIPVGQQSVIY---------NGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164 F+ + +I +QS ++ + ++++Q +T + T ++ L V L K Sbjct: 93 FSGSKAENIL--KQSSLFKRFYCHSGRSSKLFSQMMTIIQFANTPLTSVNELLMVGELYK 150 Query: 165 IIYQWI---CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 ++ I L + + + + ++ +H+ V D+A + S ++L ++F Sbjct: 151 LLAALIEEFPLSHLEESNSSTKAYVNQVKKIIHSQYGSSLRVNDIAKKLNLSRSYLYKIF 210 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 + T + KEY L R+ + LL+ S+ E+++++ F DS FSKAFK+ FG +PS Sbjct: 211 RKSTNLSIKEYILQVRMKRSQYLLENPKLSIAEISNSVGFSDSLAFSKAFKNYFGKSPSK 270 Query: 282 VLK 284 K Sbjct: 271 FRK 273 >UniRef50_UPI000174610C response regulator receiver domain protein (CheY-like) n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174610C Length = 280 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 14/227 (6%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT 117 A S++ T G G++LL +G + + P ++++H EG VW W+ + Sbjct: 58 AGSFILACTA-GKGRVLL-DGRWQRVGAGMVCMAPPRVLNAFHAEGAEVWRFAWLRYDEP 115 Query: 118 SMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177 + + VG S + E + + L T E ++ K+++ WI L + Sbjct: 116 AFVSPMVGASSPVLAAEGAMEIARAIDGLRTEWEGHRD-------PKLLHHWIELAHGLA 168 Query: 178 KKDPQRRQIEKLIATLHASLQQ----RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233 ++ Q ++E + TL S+QQ W++ +A S LRR+ R G++P ++ Sbjct: 169 RRAAQPFEMEARLWTLWTSVQQSLAEEWTLESLARAYHSSGEHLRRVCQRELGRSPMQHL 228 Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 R+ A LL+ + V VA + + D FS+AFK G APS Sbjct: 229 TYMRMQRARQLLETTSDKVEVVAGEVGYRDGLVFSRAFKRWVGCAPS 275 >UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D1A4_PAESJ Length = 284 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 18/242 (7%) Query: 54 KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWME 113 ++P + W+ +YTV G G++ N +T I L P H Y +G WE W+ Sbjct: 33 QRPSGSRDWLLMYTVSGEGQVQKNNQSTVTCGAGDIAVLMPGIPHHYGTKGTSWEFIWVH 92 Query: 114 FTP----TSMMDIPVGQQSVIYN----GEIYNQELTEVAELI-----TSPEAIKNNLA-V 159 F P ++ + +P + + + G+ + +A ++ + LA + Sbjct: 93 FIPDPEWSTWLRLPGSDERLFFRHVGKGDSRDSIHEALARMVRHETSAGSSRLHRRLAEM 152 Query: 160 AFLTKIIY-QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218 A +IY Q C + DP+ I +++ L S QR S+ ++A S + L Sbjct: 153 ALEETLIYIQQTCPAESAVTMDPR---IAQILRELQLSPAQRISLPELAKKSCLSTSRLS 209 Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278 LF G T RL+ A LL + E+A + F + +F++ FK FG Sbjct: 210 HLFKEQVGDTVLNVLCKIRLEKAAQLLTGTNRQITEIASDVGFDCTIYFTRKFKETFGET 269 Query: 279 PS 280 PS Sbjct: 270 PS 271 >UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1T1_CLOCE Length = 265 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/272 (22%), Positives = 122/272 (44%), Gaps = 21/272 (7%) Query: 16 YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75 +NIPLL LI W + H+ P ++ LI Y V G G + Sbjct: 2 HNIPLL--NKGFEEVNPLICGWQSCDKGHF--FGPASREYYLIH------YVVSGSG-VF 50 Query: 76 LKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGE 134 + G++ L +C+ ++P ++ Y + WE W+ F + + D+ ++ ++ + Sbjct: 51 ERAGKRYPLSKDCLFLIRPYELTFYKADKENPWEYIWIGFDGSLVPDL---LKNSGFSDD 107 Query: 135 IYNQELTEVAELITSPEAIKN--NLAVAFLTKIIYQWICLMYADGKKDPQRRQ----IEK 188 I + ++ S + ++N + + FL I++ + + P+ ++ Sbjct: 108 ICTMHIPSLSTTFLSMKEVENLQHSSEIFLCGKIFEMFSYLSEEFSPTPKGSTTSVYCKR 167 Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 + ++ SV +A + +L R+F +YTG TP+ + ++ RL+ A LL + Sbjct: 168 AKDYIMSNYANHISVESIANMLGIDRRYLCRIFYKYTGSTPQNFIVNYRLEKAAFLLSKH 227 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 G +V E + + D ++FSK FK K+G PS Sbjct: 228 GYTVAEAGRSTGYDDIYNFSKMFKKKYGVPPS 259 >UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DM00_9BACT Length = 282 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 28/290 (9%) Query: 2 NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61 N L ++ E PY + E V+SS YR W K+ L Sbjct: 12 NTNLFFKNINFELPYKLLNFGRERVVSSD--------------YR--WHGLKRGKLETAI 55 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL--VWEQYWMEFTPTSM 119 W YT+ G GK L N T+ + + + D H Y + + WE ++ F T + Sbjct: 56 WQ--YTLSGSGK-LRSNNTTYTIQPHQAMLVTSPDDHEYFFDSMDSHWEFIYLSFCGTDL 112 Query: 120 MDI---PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + + + S + + I ++ ++ +L +P + V +++ YQ+I ++ + Sbjct: 113 VQHYKNLIAKTSPVCSLPINSKLISLFLQLTQNPHLSDSQTQVQH-SQLCYQFIMELHQE 171 Query: 177 ---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233 K+ P + I+ ++ ++ L Q S+ +MA+ S R+F + G +P EY Sbjct: 172 ILADKQKPLPQAIQNVLNHINHHLNQAISIDEMASVAKLSRYHFSRVFSKAIGISPNEYL 231 Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 + +++ A LL Q SV ++A + D +F K FK FG++P A L Sbjct: 232 IKTKMEYAQKLLFTQNLSVKQLAHECGYHDPSYFCKVFKKHFGHSPKADL 281 >UniRef50_Q47XU2 Transcriptional regulator, AraC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47XU2_COLP3 Length = 305 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 4/219 (1%) Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPV 124 + T G GKI L N E + G+ I+ L Y G WE W+ S Sbjct: 67 ISTHAGEGKIKLGNNEYLVKPGS-IVLLPAGTPFLYELSGEYWEMCWLLLHDCSEYKFVH 125 Query: 125 GQQSVIY---NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP 181 +Y N E Q ++ + E ++++ + + ++YQ + + Sbjct: 126 QLHPSVYSSINAERLYQTMSLIREFQHGESIYQSDIILRLVEVLVYQIAQTLNMGQQLTK 185 Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241 Q+++ LI ++ LQ W+V +AA + SE RL + G TP + RL+ A Sbjct: 186 QQQKFHSLIRRVNKQLQLSWTVKQLAAEMHMSEPHFFRLCKKEMGMTPIKLLTHTRLEYA 245 Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 LL+ ++ ++ADT+ + DS F+ FK +G +P Sbjct: 246 CYLLRYTQYNLDQIADTVGYGDSASFAHRFKKDYGLSPG 284 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 26/257 (10%) Query: 45 YRVIWPRDKKKPLIA-----NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99 Y W +++ PL + ++ + I+ GE L G P + Sbjct: 20 YLCYWGKERCAPLHSFGPGVRDIYKIHFIHSGRGIVKVEGETFELTGGQAFLAYPERVIF 79 Query: 100 YHCEGL-VWEQYWMEFTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAELIT 148 Y + + W W+ F + +I PV ++Y + L E E T Sbjct: 80 YQADEVDPWTYSWIGFNGEQVAEILSRTRLTPASPVLPMDTHLMPQLY-ELLNEAEESNT 138 Query: 149 SPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWSV 203 + + L F+T ++ L+ A G D R Q I + + LH+ + SV Sbjct: 139 TRDLRLQTLLYEFMTLLVE----LVPASGDADSTRTQAKDAYIHRCLDFLHSHYSEEMSV 194 Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263 +AA + +L LF R TG P++Y L R++ A +LL+ S+ EVA ++ + D Sbjct: 195 GQLAAIVGLDRKYLSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQD 254 Query: 264 SFHFSKAFKHKFGYAPS 280 + FSK FK G +PS Sbjct: 255 ALLFSKMFKKTVGTSPS 271 >UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VZN4_DYAFD Length = 292 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 31/279 (11%) Query: 26 VISSGISLISLWHTYADE----HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQ 81 + ++G S + Y +E +++ W R + I N + ++ +G G +N Sbjct: 22 LTTAGYSKVEPNQQYPNEPHPDSHKLTWNRGR----ILNDYYIIFITRGKGIFEAENLPP 77 Query: 82 ITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFT---------------PTSMMDIPVG 125 + FL P H Y + WE+YW+ F +DI Sbjct: 78 TEVSAGQCFFLFPGVWHRYKPDVKSGWEEYWLGFNGYYIRQLMNNLNFHPARPFVDIKSN 137 Query: 126 QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ 185 ++ ++ I+++ + A L + L + + I + + D DP R Sbjct: 138 KEILVLLHRIFDR--LKAANLGYHQQIAGITLQILGILNTISK-----FKDYDNDPVGRL 190 Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 I K L S +++ V ++A+ +P + R+ F + TG +P +Y+L+ RL A LL Sbjct: 191 IAKAEFILQESYEKQVDVEELASQLPMGYSAFRKAFKKITGVSPNQYHLNLRLSRARDLL 250 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 ++ E+ F F+FSK FK K G +P A + Sbjct: 251 INTNLNISEITHQTGFESVFYFSKLFKKKNGLSPVAFRR 289 >UniRef50_Q0SVI3 DNA-binding response regulator, AraC family n=9 Tax=Clostridium perfringens RepID=Q0SVI3_CLOPS Length = 529 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 88/175 (50%), Gaps = 12/175 (6%) Query: 112 MEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAEL------ITSPEAIKNNLAVAFLTKI 165 M P+++++ +I N E +L ++ EL + E + NN + I Sbjct: 349 MNVKPSNLINYVNFMCELIENHEYVQDDLNDIKELKGKILKSDNIEELINN------STI 402 Query: 166 IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225 + +I Y K+ +R++ ++I + ++ +R ++ +A + +E++L R+F T Sbjct: 403 LIDYINQRYIKSKELSYKREVNEIIKFIEKNIDKRITLVMVANAVNLNESYLSRIFKSET 462 Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 GK + + ++ A LLKQQ V EVA+++ D F+F++ FK +G +PS Sbjct: 463 GKNLMYFINEVKMKKAKELLKQQDTLVKEVANSIGMTDQFYFNRVFKKFYGVSPS 517 >UniRef50_B9KTR6 Transcriptional regulator, AraC family n=2 Tax=Rhodobacter sphaeroides RepID=B9KTR6_RHOSK Length = 306 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 QI KL A + SVA+MA + SE+W RLF TG TP ++ L R++LA +L Sbjct: 192 QIRKLERAFRAGGGRGQSVAEMAQVVGLSESWFTRLFRDTTGVTPLQWQLRQRVELAQTL 251 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 L++ SV E+AD L F D H ++ F+ G P A Sbjct: 252 LEEN-LSVAEIADRLGFSDQAHLTRVFRQVTGQPPGA 287 >UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XZD9_PEDHD Length = 294 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 24/247 (9%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWME 113 K I + + +Y +G G + +Q+ ++ +I L P + H + + W++YW+ Sbjct: 50 KGRILDEYQLIYISKGTGIFESAHCKQLHINEGAVILLFPGEWHRFKPDPETGWDEYWVG 109 Query: 114 FTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163 F + +I P+ Q + + +L ++ I + ++ Sbjct: 110 FKGDIISNIAKKNFISPHLPLLQVGL-------SDQLIDLFSAILEKTKTEQPGYQPLIS 162 Query: 164 KIIYQWICLMYADGK------KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 +I + +YA K +D I K L S+ ++ +A + S +W Sbjct: 163 GMILHLLGEVYAKTKLQALEKEDISEILINKARILLRESVHTNIAIEKLAEELHVSYSWF 222 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 R+ F +TG P +Y L +++ A +LL + E+A L F SF+FS+ FK+K Y Sbjct: 223 RKAFKTFTGIAPHQYLLQLKIEKAKTLLSDSTKPIKEIAFELGFESSFYFSRIFKNKTSY 282 Query: 278 APSAVLK 284 AP K Sbjct: 283 APDTYRK 289 >UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=Lactobacillus RepID=C2EDY7_9LACO Length = 284 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 11/233 (4%) Query: 58 IANSWVAVYTVQGCGKILLKNGEQITL-HGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTP 116 I ++V Y +GCG + L G+C I K + E WE W+ + Sbjct: 46 IRENYVIHYIRKGCGTFSSAGRPVVELKQGDCFILPKGVPCFYQADEKDPWEYSWIGLSG 105 Query: 117 TSMMDIPVGQQ-------SVIYNGEIYNQELTEVAELITSPEAIKNNLAV-AFLTKIIYQ 168 +I I + E N L+ + E + +KN+L + L K+ + Sbjct: 106 IRTGEIFAASSISEKNYLCQIQDTEFKNS-LSRLYESLHLTHNMKNSLLTESLLYKMFHD 164 Query: 169 WICLMYAD-GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 + A+ +K R Q + + + S+ D+ + S ++L LF ++ G Sbjct: 165 LLDEFPAEVTRKTNSRTQFRLAVEYMRDNYDTGCSILDVCRGLSVSRSYLYSLFKKFAGS 224 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 +P+++ + R++ A LLK S+ +AD++ + DSF FSKAF+ G +P+ Sbjct: 225 SPQKFLTEIRMEEAEHLLKDTDRSIQNIADSIGYGDSFTFSKAFRKSRGCSPT 277 >UniRef50_UPI0001C34C27 transcriptional regulator, AraC family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34C27 Length = 262 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 18/249 (7%) Query: 37 WHTY--ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94 WH D + P P W+ Y +QG G + E G + ++P Sbjct: 12 WHDINPVDCGWEACAPGHSFGPAARFYWLLHYVIQGRGAFTAEGKESPVRAGQMFV-IRP 70 Query: 95 MDIHSYHCEGLV-WEQYWMEFTPTSMMDIPVGQQSVI---YNGEIYNQELTEVAELITSP 150 ++ Y + WE W+ FT + + Q++V+ G I++ L AE T Sbjct: 71 FEVTYYEADRREPWEYIWIGFTCGIPLPECLLQEAVVNASRCGSIFSSMLE--AENQTDG 128 Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210 + FL +Q + + + K +E+ L A+ + S+ ++A + Sbjct: 129 REL-------FLCGKAFQLLAAL--EEKPAGGEDYVEQARTYLEANYMRDVSIGELAGKL 179 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 + ++ LF + TGK+P++Y D R+ A L+ + G S G+ A + + D F FS+ Sbjct: 180 NLNRSYFSTLFRKKTGKSPQQYLTDYRMGRACQLMTEHGYSPGKAALSTGYPDIFSFSRM 239 Query: 271 FKHKFGYAP 279 FK FG P Sbjct: 240 FKKHFGVFP 248 >UniRef50_A6VZ04 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VZ04_MARMS Length = 328 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 8/135 (5%) Query: 153 IKNNLAVAFLTKIIYQWI-----CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMA 207 I LA I+ +W+ + + +DP+ Q+ ++ LH ++WSVADMA Sbjct: 189 ILTRLADVVAAAILRRWVEIGCNVCGWVEAMRDPKLAQV---LSALHHEPGRQWSVADMA 245 Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267 + + S + F T TP++Y + R+ LA + Q S+ E+AD L + + F Sbjct: 246 SEMGVSRSVFAERFTELTHSTPQQYLGNLRMRLASQWISQDNLSLDEIADRLGYGSAASF 305 Query: 268 SKAFKHKFGYAPSAV 282 S+AFK G +P AV Sbjct: 306 SRAFKRMTGISPGAV 320 >UniRef50_D1N947 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N947_9BACT Length = 303 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 14/220 (6%) Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFT-PTSMMDIP 123 + + G G+ ++NG + L + + P D + Y + L + + + F P + M Sbjct: 65 HLISGGGRGWIENGRETDLTPGQAVVIAPGDRNRYGGSDTLPYVEDAVRFCGPAADM--- 121 Query: 124 VGQQSVIYNGEIYN----QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179 + VI +G IYN + L + EL P A A L K++ +Y + ++ Sbjct: 122 MRNAGVISSG-IYNLGGVRRLLPLIELAQDPSADAQINANIALQKLLVD----LYNEHRR 176 Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239 +E+L+A + + W+V ++A S LRR FLR+TG PK Y + +L Sbjct: 177 RNTLTPMEELVAEIKSRPDHWWTVEELAEFCNLSTDQLRRNFLRHTGMRPKRYLEELKLR 236 Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 A LL + VA + D +HFS+ FK+ G +P Sbjct: 237 QAAELLVSSPLPIAVVAAKFGYADPYHFSRRFKNLTGVSP 276 >UniRef50_C6D7G4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7G4_PAESJ Length = 522 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 22/239 (9%) Query: 58 IANSWVA----VYTVQGCGKILLKNGEQITL-HGNCIIFLKPMDIHSYHCEGLVWEQYWM 112 + +SW++ ++ V G L NG + L G C++F + + H V + Sbjct: 21 VHSSWMSAGYTLFAVTGGKGKLWANGREYVLSRGKCLVFGPGITLRLTHLPSSVLTVQEL 80 Query: 113 EFTPTSM----------MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFL 162 F S+ +++P G+ + G E E+A ++ K LA Sbjct: 81 VFDCVSLTQAAPENIPALELPEGE---LLPGSFIRIE--ELAGMLFDNRGDKQGLAAYGN 135 Query: 163 TKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQR--WSVADMAATIPCSEAWLRRL 220 + I L+ ++G+ +R + + T+ Q+ +++ ++A S R+ Sbjct: 136 HARFQELIYLVLSEGQAGEERASLAAVERTIELVQQKAAGFTLQELADETGLSARQYSRI 195 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 F + TG++P +Y ++ R++ A SLL G S+ +VA F D FHFS++FK G +P Sbjct: 196 FRQLTGQSPIDYQIERRMEHAKSLLTDSGQSIHQVAHEAGFRDPFHFSRSFKRHTGVSP 254 >UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4P0_BREBN Length = 515 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 12/237 (5%) Query: 60 NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM 119 N+ V Y +G ++ + +Q+ G ++ I C+ Y + + Sbjct: 20 NTHVLCYVAEGRAEMTVDGQKQVLDAGKLLLLHPTTKIEELRCQSGPLHIYRLHYAEARR 79 Query: 120 MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI----KNNLAVAFLTK--IIYQWICLM 173 +S E+ ++ A +T E + + +FL ++Y+ + ++ Sbjct: 80 DQ----HESAPERKEVEALAVSTPASFLTVLEELSQLTRKRDYSSFLRSQALLYELLGVV 135 Query: 174 YADGKKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 Y + KK ++ IE+ IA + ++ + + + + + R F R TG TP E Sbjct: 136 YDEQKKKEEKGIGTIEETIAYMQKHYRESLELGSLPSLAGLTPSSYCRAFKRVTGMTPGE 195 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 Y R++ A LL G SV +VA + + D +FS+ FK + G +P +K +DQ Sbjct: 196 YLTGLRMEHAKELLAHSGGSVKDVARNVGYTDELYFSRLFKKREGLSPQIYMKQSDQ 252 >UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=A9QSR3_LACLK Length = 289 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 15/237 (6%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLV-WEQYWME 113 P I ++V Y G G+ ++ E G+C F+ P D+ + Y + L W YW+ Sbjct: 31 PAIRENYVIHYITSGSGRYMIYGFEHQLKAGDC--FIIPADVETFYQSDALTPWAYYWLG 88 Query: 114 FTPTSMMDIPVGQQSVIYNGEI--------YNQELTEVAELITSPEAIKNNLAVAFLTKI 165 + + D+ + ++ G I + + +++ LI+ + + L + Sbjct: 89 LSGHVVNDL-FARTALDDKGWILENVSKTEFIEHFSKIQNLISDDDKTVDLDIQVELFAL 147 Query: 166 IYQWICLM--YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 + I L K+ EK ++ + Q + D+ A + S A+L +F Sbjct: 148 MKSLITLFPKSITEHKNQSDYYAEKAYTFINQNYSQSIKIKDVLAHVMISRAYLFTIFKH 207 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 G +P++Y +D R+ A LL N V ++++ + F DS FS AFK ++G +P+ Sbjct: 208 KYGLSPQKYLIDLRMAKAAMLLIHSDNLVSQISEAVGFSDSLSFSSAFKKRYGVSPT 264 >UniRef50_A3TV05 Putative transcriptional regulator n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TV05_9RHOB Length = 291 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 56/111 (50%) Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 DG Q+ K+ A +R S A MA + SE+W ++F TG TP ++ L Sbjct: 177 GDGNARLTAGQMRKVAMRFDAGGGRRLSTAQMADAVNLSESWFSQVFKNTTGMTPHQWQL 236 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + R+D A LL SV ++AD L F D H +++F+ G P++ +N Sbjct: 237 NKRVDQAQELLSGTDLSVADIADRLGFSDQAHLTRSFRQIVGETPASWRRN 287 >UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=C7H3E2_9FIRM Length = 306 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 23/257 (8%) Query: 51 RDKKKPLIANSWVA-------VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI--HSYH 101 R KK+P + W +Y G E++ G+ +++ +P +I + Y+ Sbjct: 50 RLKKRPKLPTFWAKGRRDYQILYVASGKAHFWFDGVEEVVTSGHMVLY-QPKEIQKYVYY 108 Query: 102 CEGLVWEQYWMEFTPTSMMDI------PVGQQSVIYNGEI--YNQELTEVAELITSPEAI 153 E E +W+ FT + +I P+ + V Y+G + Y ++ + E Sbjct: 109 VEDHP-EVFWIHFTGYDVKNILNYHGIPLDKH-VFYSGTLPDYKMLFRKIIRELQQCEYG 166 Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIP 211 + +A L II + + +K +IE +A + + + SV D A ++ Sbjct: 167 YEDY-IASLFNIILFLVSRQQQESEKTTTSIPEEIEAAVAYFNENYNTKVSVDDYAESLH 225 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 S W R F +Y +P +Y L R+ A SLL+ ++GE+A+ + + + +FS+ F Sbjct: 226 ISTNWFIRNFKQYMKISPAQYILSLRMVNAQSLLENTEYNIGEIAEIVGYDNPLYFSRVF 285 Query: 272 KHKFGYAPSAVLKNTDQ 288 K ++G +P+ KN ++ Sbjct: 286 KKEYGVSPAQYRKNLEE 302 >UniRef50_C4DTW1 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DTW1_9ACTO Length = 431 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 13/218 (5%) Query: 70 GCGKILLKNGEQITLHGNCIIFL---KPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQ 126 G G++ L + G C +F P+ H LV + M FT T V + Sbjct: 18 GAGELRLDDRHVRLRPGFCAVFAPGDAPVATHDPRHPLLV---FGMHFTATGFDGDLVPE 74 Query: 127 QSVIYNGEIYNQELT-EVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK---DPQ 182 Q +++QE +A ++L + Q++CL++ + + P Sbjct: 75 QRWC---RLWDQEFAVRLARHCDYAHRRGDDLGQRQAVLGLEQFLCLLWDNVTRPAPGPG 131 Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242 +E + + + W+VA +A S A R F +TG +P Y + ARLD A Sbjct: 132 DAAVEDIARAVRQEPSRDWTVATLAKRANLSRAQFTRRFTAHTGYSPARYVIRARLDRAR 191 Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 LL + SVG+VA TL + D +FS+ +K G +PS Sbjct: 192 QLLTETNMSVGQVAATLGYPDVGYFSRQYKVHTGSSPS 229 >UniRef50_B0KFJ0 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=B0KFJ0_PSEPG Length = 361 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 14/122 (11%) Query: 173 MYADGKKDPQRRQIEKLIATLHAS--------------LQQRWSVADMAATIPCSEAWLR 218 M + ++PQ +Q E LHA L++ S +A + S L Sbjct: 215 MLIEQVREPQVQQAEGYRRNLHAQAGKMGRAIELMEQHLEEPLSCEAIAERVALSRRQLE 274 Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278 R F+++TG TP +YYL RL A +LL+Q SV +VA + F HFS+A++ KFG A Sbjct: 275 RQFMQHTGLTPLKYYLSLRLARAHNLLQQTRMSVAQVAASAGFGSLEHFSRAYRAKFGCA 334 Query: 279 PS 280 PS Sbjct: 335 PS 336 >UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVH4_PAESJ Length = 287 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 33/277 (11%) Query: 42 DEHYRVIW-------PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94 +EH V++ P ++ P + + ++ ++G G+ G+ L ++P Sbjct: 17 NEHMNVLFAGESQTKPSHQRGPKVYDFYLMHTVLEGKGEFTC-GGKSYPLQAGDTFLIEP 75 Query: 95 MDIHSYHCEG-LVWEQYWMEFTPTSMMDI----------PVGQQSVIYN-GEIYNQELTE 142 + SY W W+ F ++ PV + + I G +YN + Sbjct: 76 EALVSYISNADEPWLYRWVAFNGPQAAELAQAAGFSVANPVAETAAIRRVGVLYNHIFSI 135 Query: 143 VAELITSPEAIKNNLAVAFLTKIIYQWICLMY-------ADGKKDPQRRQIEKLIATLHA 195 + P A +L A +++ C ++ A D + I+++I L Sbjct: 136 FRK--NDPAA---HLKAAGYLQLLLAEFCTVHKLSEDNAAMTNMDDTDKLIQQMIHYLST 190 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ-QGNSVGE 254 Q S+ MA + + A+L R+F RYTG++P + L R+D A ++++ +G ++ + Sbjct: 191 QYAQPVSIEQMAESFGYNRAYLSRVFKRYTGESPITFLLKLRIDKARQMIREREGLTIEQ 250 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPT 291 +A ++ DS +FSK F+ +G +PSA ++ Q T Sbjct: 251 IAASVGLQDSLYFSKQFRRFYGLSPSAYRESMRQMKT 287 >UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AB39_9PORP Length = 306 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 126/289 (43%), Gaps = 14/289 (4%) Query: 18 IPLLINENVISSGISLISLWH-----TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72 +P +EN+ IS I +Y + + + + + + I + + VY V+G G Sbjct: 14 LPTNNDENIWGMSISGIGFQSIDPKGSYPLKGHPIGYTFNPDRGRIIDEFALVYIVKGEG 73 Query: 73 KILLKNGEQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFTPT---SMMDIPVGQQS 128 N + + F+ P HSY + W++Y++ F +++ + + + Sbjct: 74 TFASINCFEKKISKGDAFFIFPGQWHSYQPIANIGWDEYYVTFQGDYFEKLLNGIINRAN 133 Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP----QRR 184 I++ + +Q + E++ A K+ A L I I L+Y+ K + Sbjct: 134 PIFHIGMNDQIVKHFGEMLDCARAQKSGFQ-AVLAGITMHTIGLIYSINKNQDYGSVSMQ 192 Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +I++ + ++ +++ D+A +I S + R+ F +YTG P +Y L +L L Sbjct: 193 KIQEACVLMRENIYDKFTPEDIAESINMSYSNFRKSFKQYTGIAPHQYMLQLKLSKIKDL 252 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDA 293 L S+ ++A LNF + +FS F+ K G P + K ++ A Sbjct: 253 LSSTEMSIQDIAMKLNFESADYFSYFFRSKTGINPLSYRKEIEKQREKA 301 >UniRef50_C7MF03 DNA-binding domain-containing protein, AraC-type n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MF03_BRAFD Length = 311 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 7/194 (3%) Query: 90 IFLKPMDIHSYHCEGLVWEQYWMEF----TPTSMMDIPVGQQSVIYNGEIYNQELTEVAE 145 I+L+P HSY + W ++W+ F T VG V+ G E E+ Sbjct: 104 IWLEPGTPHSYGPDAHGWTEHWVLFEGVGARTYRSHSGVGDGHVLRRGGPEPAERAEIFA 163 Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVAD 205 + ++ A + ++++ + + D ++DPQR + T+ A+ + SVA Sbjct: 164 ALHRAGSVPGRRAQLHASSLVHRLLGALLGDAEEDPQRTSVTH---TVLATATEDLSVAQ 220 Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265 AA R R TG TP E+ L R A LL + + +VA + D+ Sbjct: 221 RAALSGVGVDEFRAQIRRATGLTPHEFVLTTRFSRAQELLARSDLPIWQVAAEVGIDDAS 280 Query: 266 HFSKAFKHKFGYAP 279 +F++ F + G AP Sbjct: 281 YFTRLFTRRIGVAP 294 >UniRef50_A4BIK9 AraC-type DNA-binding domain-containing protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIK9_9GAMM Length = 271 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 22/225 (9%) Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTS-----M 119 ++T G G I ++GEQ G+ + + + EG W+ W P M Sbjct: 50 LFTSSGTGHITTEHGEQAIEPGSMTV-IPAHTPARFEIEGDRWDMCWFLLLPAMHWNQWM 108 Query: 120 MDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 D+ P GQ +++ + +I + + A K+ + A Sbjct: 109 PDVAEVRPTGQAPAVFH----------LCHVIDQERYLDASYPKASFQKLASYIELNLKA 158 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 + + P R + A + SL + W+V +A SE RL GK+PK+ Sbjct: 159 NQPETPDR--LSAAFAQVEQSLHKPWTVGQVANLCYYSEPHFYRLCQERFGKSPKQIIRQ 216 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 R+D A LL+Q + E+A L F D F+FS FK + G +PS Sbjct: 217 LRMDRARQLLEQTDWPLAELAGRLGFSDQFNFSNRFKRETGLSPS 261 >UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10 Tax=Rhizobium/Agrobacterium group RepID=B5ZUS0_RHILW Length = 274 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 11/235 (4%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYW 111 D+K P S+ V +G G + +++L G + +L P HSY + W++ W Sbjct: 34 DRKLP----SFAVVLVERGQGWLETAASGRLSLTGPALFWLFPNRAHSYSPDEDGWDERW 89 Query: 112 MEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEA-------IKNNLAVAFLTK 164 F + D + + + L +VA L + A + A L + Sbjct: 90 ALFEGSFTRDFVRLRIIAERHPVVALHRLDDVARLFGTLHADLLDDTHLGQASAALMLHR 149 Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 I+ ++ +R + ++ TL Q +A AA S A LRR F Sbjct: 150 IVISAARQAIGAAERRQERPDMAVIVETLRRRAMQPLDLAAFAAEHQMSPATLRRRFTLE 209 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 TG PK + L AR+D A LL + VA + D F+FS+ F + G +P Sbjct: 210 TGLPPKAFQLRARMDHAKQLLATTDEKIEAVAAMIGLEDPFYFSRVFHEREGCSP 264 >UniRef50_A0L3B8 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=A0L3B8_SHESA Length = 311 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 7/141 (4%) Query: 155 NNLAVAFLTKIIY-QWICL-MYADGK-----KDPQRRQIEKLIATLHASLQQRWSVADMA 207 +N V LT+II+ Q + + MY K K + Q+ K + +H SL ++W + D+A Sbjct: 169 SNTLVRKLTEIIFVQALRIHMYKSNKNAGFFKLIENPQLSKTLEAIHHSLDKKWGLDDLA 228 Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267 S F +G TP +Y RL+ A LLK+ G SV EV++ + + HF Sbjct: 229 GIAGMSRTNYSVKFKELSGMTPLDYLTYCRLEKAKQLLKESGKSVPEVSEAIGYPAHEHF 288 Query: 268 SKAFKHKFGYAPSAVLKNTDQ 288 K FK K G PSA K + Sbjct: 289 QKLFKKKIGKTPSAYRKENSE 309 >UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bacteroides fragilis 3_1_12 RepID=UPI0001B4A5A3 Length = 302 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 29/197 (14%) Query: 107 WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQ--ELTE-----VAELITSPEAIKNNLAV 159 W YW+ FT G++S ++N YN+ ++ E + + + E I NL + Sbjct: 112 WSIYWLHFT---------GEKSHLFNS-FYNKLHKIDESPNARIKDRMQLFEEIYQNLEM 161 Query: 160 AF-LTKIIYQWICLMY--ADGKKDPQRRQI---------EKLIATLHASLQQRWSVADMA 207 + + + Y +CL + A K Q R+I ++ I+ + +++++ S+ D+A Sbjct: 162 GYSIENLEYTTLCLWHFIASFKFVSQFREINRAKQGDVTQEAISYMRKNIEKKLSLDDIA 221 Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267 ++ S + ++FL+ +G TP Y+ ++ A LL + E+A+ L F+D +HF Sbjct: 222 GSVNYSSSHFGQVFLKKSGYTPLNYFNQLKIQKACQLLDFSDLKIKEIAEQLGFYDQYHF 281 Query: 268 SKAFKHKFGYAPSAVLK 284 SK F + G PS+ K Sbjct: 282 SKVFYKQIGETPSSYKK 298 >UniRef50_B9K0A2 Transcriptional regulator AraC family n=18 Tax=Rhizobiales RepID=B9K0A2_AGRVS Length = 314 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 22/232 (9%) Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121 V +T+ G G + +N G ++ L P + H Y E G WE +W+ + Sbjct: 59 VLQHTISGAGNLRYENSTYRVTPGQTLLVLVPHN-HRYWLEPGGRWEFFWISMNGEEALR 117 Query: 122 I---------PV---GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169 I P+ QQ+V + + + + AE AI A+A + Sbjct: 118 IHNAILTAMGPIFNLNQQTVEHLADCSQRLIAGGAETPGRASAIAYEAAMALYDDVFGSH 177 Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229 L + R ++ +I + A+L Q SV +AA S A R+F G P Sbjct: 178 PTL-------SAEYRTMQHVIDHISANLDQSLSVEQLAAVSGLSRAHFSRVFAASEGMPP 230 Query: 230 KEYYLDARLDLALSLLKQQGN-SVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 E+ L RL A+ LL + + SV E++ F + +FSK F+ FG +P+ Sbjct: 231 AEFVLHKRLKRAVKLLTKGSHLSVKEISTMCGFEEPNYFSKVFRRHFGASPT 282 >UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D1W6_PAESJ Length = 264 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 58/261 (22%), Positives = 116/261 (44%), Gaps = 19/261 (7%) Query: 38 HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97 H +E Y ++ P ++ W+ VYT++G G GE+I G ++ K + Sbjct: 13 HFLENESYCMVRPAGRE------DWLLVYTLEGEGFFRTPAGEKICKAGELVLLRKRVP- 65 Query: 98 HSYH-CEGLVWEQYWMEFTPTSMMDIPVGQQSVIY---NGEIYNQELTEVAELITSPEAI 153 H+Y +G W W+ F + + ++ ++ + E+ + + L+ A Sbjct: 66 HTYGTVKGDTWNFLWVHFNRLPELSLLPDEEVLLCPLPSSELQRRVIRIFRSLLHDSRAQ 125 Query: 154 KN---NLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210 L L+ +I L+ A D ++ +++ L A +Q+ S+ ++AA + Sbjct: 126 GGFWEELCDNQLSALI-----LLMAGQLADKLDYRVSQVMRILSAQMQEPLSINELAARV 180 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 S + L LF TG++ + + RL+ A+ L+ Q G + GE + + F HF+ Sbjct: 181 GLSASRLSHLFKSETGRSIVDTLNNMRLEQAVLLMLQAGRTAGEASFDVGFQSYNHFAAL 240 Query: 271 FKHKFGYAPSAVLKNTDQHPT 291 F+ ++G P+ + T+ T Sbjct: 241 FRRRYGCGPAEYKRKTESTST 261 >UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H973_9FIRM Length = 271 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 3/157 (1%) Query: 125 GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD--PQ 182 G Q+ +Y ++ L + ++ S E+ + + +LT I++ ++ K+D P+ Sbjct: 107 GAQTALYGPVQWSGRLRTLLGMMQSAESEPESPGMIYLTLILH-YVEQECRSEKQDIRPR 165 Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242 +E++ A L A+ QQ++S+ D+AA S +L RLF R TG++ +Y R++ A Sbjct: 166 NETVEQICAYLAANYQQKFSLTDVAARFYLSPYYLSRLFRRVTGQSIVDYINGRRIEAAQ 225 Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 LL+ ++ VA+ F + HF + F+ G P Sbjct: 226 RLLESTDLNISAVAEQTGFASAAHFRRVFRETMGTGP 262 >UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides RepID=A6KXZ8_BACV8 Length = 306 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 20/279 (7%) Query: 20 LLINE-------NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72 L++NE +V + G I Y ++ + +K + + + VY +G G Sbjct: 13 LIVNERDKRFGLSVTTVGFQAIRAGSVYPPRNHPDAYYFTAQKGRVLHEYQLVYITKGRG 72 Query: 73 KILLKNGEQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFTPTSMMDIP----VGQQ 127 + + I+FL P H+Y + W +Y++ F + ++ + ++ Sbjct: 73 TFASDTTPSVDISKGQILFLFPGQWHTYAPLQKTGWNEYYIGFEGPIIDNLVKNSFISKE 132 Query: 128 SVIYNGEIYNQELTEV-AELITSPEAIKNNLAVAFLTKIIYQWI--CLMYADGKK---DP 181 S I + I N+EL + A + EA K A +L+ I+ + L + K+ D Sbjct: 133 SQILDIGI-NEELASLFARALEVAEADKT-AAQQYLSGIVLHIMGAVLAISQNKRYEVDN 190 Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241 ++IE +H ++ + ++A + S +W R++F YTG P +Y+ + +L A Sbjct: 191 AAQKIESAKIIMHENVYKDIDPEELAMKLGISYSWFRKVFKEYTGYAPAKYFQELKLRKA 250 Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 LL + SV E+ LN+ + HF FK + + P+ Sbjct: 251 KQLLIESSMSVKEICYELNYTSTEHFFSVFKKRTNFTPT 289 >UniRef50_A0Z695 Transcriptional regulator, AraC family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z695_9GAMM Length = 338 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 54/95 (56%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 ++++++ + A+L++ S+ ++A + S L RLFL+Y TP YYL RLD A L Sbjct: 223 KLKEVLQLMEANLEEPISLQELADFVQLSRRQLERLFLKYLHCTPSRYYLKLRLDRARRL 282 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +KQ S+ E+ F + HFS+ ++ G +P Sbjct: 283 VKQSTRSIVEITSMCGFVSTTHFSRCYRKYIGVSP 317 >UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n=2 Tax=Bacteria RepID=B5JKR3_9BACT Length = 301 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 20/257 (7%) Query: 51 RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQ 109 RD+ P + + +Y + G G L ++I + I + H+Y EG W Sbjct: 51 RDQGCP----NHILIYCIGGQGWYSLNGEKRIPVQAGQAILIPAKSPHAYGSTEGQSWRL 106 Query: 110 YWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPE-AIK-----NNLAVAFLT 163 YW+ F+ T + N IY L A +IT+ E AI+ ++ +V Sbjct: 107 YWIHFSGTEADGLFNFLSDERTNALIY---LPHHASIITAFEDAIRWTQREHSKSVLHAF 163 Query: 164 KIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 + + A+GK+ R ++ I + +L+ S+ +A+ S Sbjct: 164 AGSCSRLLGIIAEGKRPNSSRARFVEERVRSTITRMRETLRSPLSLEQLASEACLSVPHY 223 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 LF + T +P + Y R+ LA LL + EVA+T + D+++FS+AFK G Sbjct: 224 SALFKKQTSSSPIQMYSQMRIQLACELLHNTDLGIKEVAETAGYEDAYYFSRAFKKVMGC 283 Query: 278 APSAVLKNTDQHPTDAS 294 PSA + D+ D S Sbjct: 284 PPSAYRNSLDKRQRDPS 300 >UniRef50_A9WHL1 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Chloroflexus RepID=A9WHL1_CHLAA Length = 329 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 11/151 (7%) Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGK------KDPQRRQIEKLIATLHASLQQRWSVA 204 E + LA +I+ W+ + G DP I K +A +HA QQ W VA Sbjct: 161 EVVLRRLADILFVQIVQYWVEMHGTQGSGWLGAFHDPL---IGKALALMHAHPQQDWQVA 217 Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN-SVGEVADTLNFFD 263 +A + CS + F G+ P EY R+ +A LL + + VGEVA + + Sbjct: 218 SLARALACSRSTFAARFTALVGEPPMEYLTRWRMQIASRLLIEDPSLRVGEVAARVGYRS 277 Query: 264 SFHFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294 FSKAFK G AP+A ++ H +A+ Sbjct: 278 EAAFSKAFKRLIGIAPTAY-RSAAGHRVEAT 307 >UniRef50_C9D180 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D180_9RHOB Length = 299 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 51/97 (52%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 Q+ KL QR S+A+MA + SE+W +F TG TP + D R+ A L Sbjct: 192 QMRKLERGFDQRGGQRMSIAEMAQLVGLSESWFSHVFKSTTGMTPVRWQKDRRIGNAQML 251 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 L++ SV EVA L F D HF+K F+ G+ P++ Sbjct: 252 LRESDLSVAEVAARLGFSDQSHFTKVFRDVVGHTPAS 288 >UniRef50_Q3M1N4 Transcriptional Regulator, AraC family n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3M1N4_ANAVT Length = 299 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 58/101 (57%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 Q++K+I ++ +L+Q ++A++AA + S ++ LF TG P +Y + R+D A L Sbjct: 198 QLQKVIDFINQNLEQDLALAELAAIVQMSPSYFSTLFKHSTGLAPHQYVIQCRVDRAKQL 257 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 L+Q ++ E+A +L F H S+ FK G +P +K+ Sbjct: 258 LRQSNLTIAEIAYSLGFTHQSHLSRHFKRLVGVSPKVFIKS 298 >UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969580 Length = 304 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 17/239 (7%) Query: 54 KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWM 112 +K I N + +Y + G G + N +++ +H +I L P + HSY + W +YW+ Sbjct: 51 EKGRILNEYQLIYILDGKGTFVSMNKKKMQIHSGHMILLFPGEWHSYKPDKETGWYEYWI 110 Query: 113 EFTPTSMMDIPVGQQSVIYNGEIYNQELTE-VAELITSPEAIKNNLAVAF---LTKIIYQ 168 F + + V + I+N L E V +L + F L I++ Sbjct: 111 GFNGQDIEKL-VEVDFFRKDNPIFNIGLNENVIQLYKQAANVAQEQTTGFQQILAGIVHL 169 Query: 169 WICLMYADGKKDP--------QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 + Y++ K++ Q + LIA + + + D+A I S + R++ Sbjct: 170 LLGYTYSEHKQNSFINMNVLDQINTAKHLIA---ENYKTEITPKDIATKINMSYSCFRKV 226 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 F +YTG +P Y + RL + LL + E+A + F ++F FK + GY+P Sbjct: 227 FKQYTGFSPSRYKEELRLQTSKELLANTTMTSQEIAFEVGFDTPYYFCILFKKRTGYSP 285 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 20/247 (8%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNC------IIFLKPMDIHSYHCE 103 P P N ++ Y + G G ++ N + IT N +IF P I++Y + Sbjct: 29 PGHSFGPATRNHYLFHYVLSGTGTLMADNAKGITQTYNIKSGQGFLIF--PGQINTYIAD 86 Query: 104 G-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAE-LITSPEAIKNNLAVAF 161 L WE W+EF + + + + N +Y+ ++ E L+ I + + + Sbjct: 87 DKLPWEYIWIEFDGLRVKE-ALTTTELTKNNPVYHTHSKDIREKLVEEMLYITRHPSESP 145 Query: 162 LTKIIYQWICLMY-----ADGKKDPQRRQ----IEKLIATLHASLQQRWSVADMAATIPC 212 I + ++ L Y K P + I++ + + + Q S+ D+A Sbjct: 146 YHLIGHMYLFLDYLMQSAKSSKLVPGGKMSDFYIKEAMNYIEQNFQNDISIEDIAGVCGI 205 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 + ++L ++F G +P+E+ ++ R+ A LLK S+ +V + + + HFS+AFK Sbjct: 206 NRSYLGKIFKNSVGHSPQEFLMNYRMIKATELLKLTSLSIADVGSAVGYENQLHFSRAFK 265 Query: 273 HKFGYAP 279 + +G AP Sbjct: 266 NIYGVAP 272 >UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon transcriptional regulator, putative n=29 Tax=Firmicutes RepID=A3CML2_STRSV Length = 290 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 18/247 (7%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEF 114 P I +++V Y +G G+ K G+ + L + LKP ++ Y + W YW+ Sbjct: 46 PAIRDTYVLHYITKGKGQFHYK-GKIVDLKAGDLFLLKPNELTFYQADKEEPWSYYWLGM 104 Query: 115 TPTSMMDIPVGQQ-----SVIYNGEIYNQELTEVAE-LITSPEAIKNN-LAVAFLTKIIY 167 T + D Q ++ N E + ++ E L+ E K+N LA + +Y Sbjct: 105 TGGRVYDYFNHSQIAEDCYLLANQERKTDRIGKIVENLVYFAEQTKSNQLAQLHIMGQLY 164 Query: 168 QWICLMYADGKKDPQRRQI---EKLIATLHASLQQRW-----SVADMAATIPCSEAWLRR 219 + I + + K PQ + ++L + ++ S+ DMA + ++L Sbjct: 165 ELIFHLGSVAYK-PQANTLSASQQLYLACKQIIDTQYPNPNLSIQDMAIKLSVHRSYLTT 223 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +F +PKEY R+ A LLK V +A ++ F D +FSKAFK FG++P Sbjct: 224 IFKEEHQSSPKEYLEYVRMHRAKQLLKSTREPVQFIAYSVGFSDPLYFSKAFKKYFGFSP 283 Query: 280 SAVLKNT 286 S+ + + Sbjct: 284 SSFREQS 290 >UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CS68_PAESJ Length = 288 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 7/239 (2%) Query: 54 KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWM 112 ++ + W VY G G + +GE + + +P + Y + G W++Y+ Sbjct: 46 RQGAVFQYWAIVYIAGGSGTYRVDHGEAQRVTAGSLFLFQPGFHYDYGPDPGGYWDEYYF 105 Query: 113 EFTPTSMMDI----PVGQQSVIYNGEIYNQE--LTEVAELITSPEAIKNNLAVAFLTKII 166 T + P+ +V++ GE + + + + L+ S + A L ++ Sbjct: 106 TIEGTRYREWLEHWPILPNTVMHPGEDASSQNRIDRIFALMDSGTPADADRAALTLESLL 165 Query: 167 YQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226 Y W+ + + ++ +L+ L +L + + A A + + LRR YTG Sbjct: 166 YDWVQSCQSSPAAQGKTARLAQLLEALSGTLHEPFDAAAFAERHHWALSTLRRTVSEYTG 225 Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 EY ++ A + L +V E+A L + D F+FS+ FK G AP +N Sbjct: 226 FALHEYVHRLKMAEAKNRLLNTEQTVKEIAAALGYGDVFYFSRLFKKITGEAPRLFRRN 284 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 24/249 (9%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEF 114 P + + ++ V G G + G TL + KP + +Y E WE YW+ F Sbjct: 37 PGVRDHYLIHLVVAGKG-VYQVGGVSHTLQEGDLFLAKPNQLITYAADETDPWEYYWVGF 95 Query: 115 -----------TPTSMMDIPVGQ----QSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159 TP S + PV Q+V +YN L+ E EA+ Sbjct: 96 NGACANKLVQQTPFSDLH-PVHHCKDPQAV--REALYNIYLSRGPE--PQCEALMTGYLY 150 Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 F+ ++ + M G Q + I + + SV D+A + S + L R Sbjct: 151 IFMAHLMKEARDAMPNVGSSSSQY--VLSAIKYIQFNYSHDISVDDIAKAVGVSRSHLYR 208 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +F+ G++P +Y + R+ A SLLK S+ E+A ++ FFD F+FS+ FK G P Sbjct: 209 VFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPP 268 Query: 280 SAVLKNTDQ 288 S L ++ Sbjct: 269 SKYLATLEK 277 >UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella oris F0302 RepID=D1QQ68_9BACT Length = 291 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 23/263 (8%) Query: 38 HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97 H +AD +Y + ++ I N + +Y G G + E+ + L P + Sbjct: 37 HGHADGYYFKV-----ERGRILNEYQLLYITAGEGVFKSSSVEERRIKAGDFFLLFPGEW 91 Query: 98 HSYH-CEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN-------QELTEVAELITS 149 H+YH + + W+ YW+ F +M D V + +Y+ ++L A Sbjct: 92 HTYHPSKNIGWQSYWIGFKGENM-DARVKNGFLSPTKPVYHVGYMDRLEDLYHYALDTAQ 150 Query: 150 PEAIKNNLAVAFLTKIIYQWICLMYAD------GKKDPQRRQIEKLIATLHASLQQRWSV 203 EA+ +A + ++ I +MY+ GK + + + +L++ ++ Sbjct: 151 EEAVHTQRTLAGVVNLL---IGMMYSLERNIELGKNQEHVNMVNRARKRIREALEENLTI 207 Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263 +A + S + R+LF +TG +P Y + RL A LL SV ++A L F Sbjct: 208 QQIATDMGVSYSNFRKLFKEFTGVSPALYQQELRLQRAKELLSTTNLSVKQIAYKLCFDS 267 Query: 264 SFHFSKAFKHKFGYAPSAVLKNT 286 +FS FK K PS + T Sbjct: 268 PDYFSAKFKAKINLRPSEFREQT 290 >UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D140_PAESJ Length = 296 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 29/258 (11%) Query: 40 YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99 YA HYR +P + +++ +Y GCG + L + +++ + + + H Sbjct: 45 YARHHYR-------HRPEGSEAYIVMYCTDGCGWVKLDDEKRLEVRKGELTLIPAGTPHE 97 Query: 100 Y-------------HCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAEL 146 Y H +G + ++ E + + IPV + S I E E+ Sbjct: 98 YGSSEEEPWTIYWIHLKGELAFSFFGEQGKAAPVPIPVERSSAIIG------LFDECYEM 151 Query: 147 ITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ-RRQ--IEKLIATLHASLQQRWSV 203 + + + + V+ L + I L+ A + P RRQ IEK I + L+ S+ Sbjct: 152 LLKGYTLDHVIYVSQLACHLAGIIRLVQAHRQAAPSPRRQLDIEKAIQYMTEHLEDNVSL 211 Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263 A++AA S +LF + TG +P +YYL ++ LA L SV V + F D Sbjct: 212 AELAAEAALSVPHFTQLFKKKTGYSPIDYYLRLKIQLASQYLDLTDQSVKAVGIRVGFQD 271 Query: 264 SFHFSKAFKHKFGYAPSA 281 ++FS+ FK G +PSA Sbjct: 272 PYYFSRLFKKIMGKSPSA 289 >UniRef50_D0DCB7 Helix-turn-helix-domain containing protein, AraC type n=4 Tax=Alphaproteobacteria RepID=D0DCB7_9RHOB Length = 310 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 53/97 (54%) Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 R + +L A +L +R A++A +E+WL R F + G+TP+ + + RLD A + Sbjct: 188 RILRRLEAHAREALGRRIPTAELAELAGLTESWLTRGFRQSLGQTPQRWLMGLRLDAAQA 247 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 L+ G S+ ++A F D H S+AF+ + G +P Sbjct: 248 LMPDAGRSLADIAAATGFADQAHLSRAFRARHGQSPG 284 >UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTP1_9SYNE Length = 294 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 57/102 (55%) Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242 R Q++++I + A+L Q S+ D+A+ S+++ R F + G +P +Y + R++ A Sbjct: 192 RSQLKRVIDYIEANLAQDLSIFDLASLTNMSKSYFSRSFKQSVGISPYQYVIQQRVERAK 251 Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 LLKQQ S+ ++A F + H +KAF+ G P A K Sbjct: 252 QLLKQQSISISDIALDCGFANQTHLTKAFRQMTGTTPKAYQK 293 >UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S939_9FIRM Length = 291 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 44/262 (16%) Query: 40 YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE-QITLHGNCIIFLKPMDIH 98 YA +H+ R K+ S++ YT++G G L++ GE + L + L Sbjct: 37 YAQQHFST--ARTDKE-----SYILFYTLRGAG--LIEQGESHVVLSTGQALLLNCRTPQ 87 Query: 99 SYHCEG---LVWEQYWM------------------EFTPTSMMDIPVGQQSVIYNGEIYN 137 SY C W YW+ + TP + + + + + G++ Sbjct: 88 SY-CTAPGQSCWHHYWVHLDGAGVAAMEPLLLPGKKLTPVQLTGVKMQEYFEMLLGQM-- 144 Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASL 197 E + V ++T+ A+ LA+ + + A + R+ I + TL + Sbjct: 145 -EHSTVDSMVTTGLALHEMLALCARS---------ILAQAEATSARQVILQAAETLSKNY 194 Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257 Q+ +AD+ A S+++ RLF RY G TP Y ++ R+ A LL +SV E+A Sbjct: 195 QKELYLADLLAEAHMSKSYFLRLFRRYMGTTPYNYLVNFRITQAKELLVLTDHSVSEIAQ 254 Query: 258 TLNFFDSFHFSKAFKHKFGYAP 279 + F D+ +FS F G +P Sbjct: 255 EVGFGDASNFSTRFAKATGQSP 276 >UniRef50_B6R353 Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R353_9RHOB Length = 314 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 48/102 (47%) Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 + + + I H + +Q W V D+A S A R F+R+ GK P EY D RL A S Sbjct: 209 KSLSRAITEFHRAPEQNWQVTDLAEIAGMSRASFARHFIRHVGKPPMEYVRDWRLMRARS 268 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 LL S E+A + FSK FK +FG P +N Sbjct: 269 LLTDTNLSSEEIATRCGYNSLPSFSKLFKKRFGMGPGTFRRN 310 >UniRef50_A7NLR2 Transcriptional regulator, AraC family n=2 Tax=Chloroflexaceae RepID=A7NLR2_ROSCS Length = 342 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 68/157 (43%), Gaps = 14/157 (8%) Query: 151 EAIKNNLAVAFLTKIIYQWI-------CLMYADGKKDPQRRQIEKLIATLHASLQQRWSV 203 E LA +II +W+ C + DP I + + +HA Q W+V Sbjct: 180 EVALRRLADILFIQIIQRWVEIEGIERCGWFG-ALHDPL---IGRALELIHAQPQHSWTV 235 Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN-SVGEVADTLNFF 262 A +A + CS ++ F G+ P EY RL LA LL + S G++A + + Sbjct: 236 AALARAVACSRSFFAARFTALVGEPPMEYLRRWRLQLATHLLMDHAHVSAGDIAARIGYH 295 Query: 263 DSFHFSKAFKHKFGYAPSAVLK--NTDQHPTDASPHN 297 FSKAFK G AP A K + + TDA N Sbjct: 296 SEAAFSKAFKRSLGIAPGAYRKRHSAARSSTDARDVN 332 >UniRef50_Q1QYW4 Transcriptional regulator, AraC family with amidase-like domain n=20 Tax=Gammaproteobacteria RepID=Q1QYW4_CHRSD Length = 375 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 3/112 (2%) Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 Q + L + G P+ + +++A + A+L++ ++ ++A + S L RLF +Y Sbjct: 213 QRVPLRHVLGTSQPK---LLEIVALMEANLEEPIALDELARYVDVSRRQLERLFQKYLSC 269 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +P YYL RL A LL+Q S+ E+A F + HFSK ++ FG P Sbjct: 270 SPSRYYLKLRLTRARQLLRQTSMSIIEIASVCGFVSTPHFSKCYREYFGTPP 321 >UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8K8_9CLOT Length = 299 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 22/251 (8%) Query: 60 NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTS 118 +S++ +YT+ G G I + +G +I ++ + +F+ Y E V W W T Sbjct: 50 DSYLILYTISGRGSITV-DGNEIDIYAHNAVFINCNSHQFYKTESDVPWVFLWAHINGTG 108 Query: 119 MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIK-----------NNLAVAF--LTKI 165 + S++ G + +++++ A+ + E I +NL+V L I Sbjct: 109 VE----PYYSLVNVGRVSQEKISDYADFVELFEEILITSKFNDVRTLSNLSVNLQRLLSI 164 Query: 166 IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225 I + + K + I + + + +++ S+ D+ I S+ + RLF +Y Sbjct: 165 ILKSRLSSSNNKKHESHIADIRSSVDYIRKNYKRQISIDDIIHRINISKYYFIRLFKQYM 224 Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 G TP +Y ++ R++ A LL +G+++ + F D +F FK + G P+ + Sbjct: 225 GTTPYDYLINYRINQAKILLNSTSMPIGDISQEVGFLDESNFISHFKRQTGIKPTEYRNS 284 Query: 286 T---DQHPTDA 293 T + P DA Sbjct: 285 TLGFHRPPKDA 295 >UniRef50_B8CZL9 Response regulator receiver protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZL9_HALOH Length = 386 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 58/112 (51%) Query: 174 YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233 Y +K R + K+ ++ +L ++ +A S + L +LF +YTGK EY Sbjct: 270 YIAQQKSEDRELVLKVKEAVNKNLSSGLTLNQLAEEFNLSNSSLSQLFRKYTGKNFSEYL 329 Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 D R++ A LLK G V E+AD + F D ++FS FK + G +P+ +N Sbjct: 330 DDIRINKARELLKTTGKKVYEIADEIGFDDPYYFSSWFKKRTGVSPTTYREN 381 >UniRef50_A0B2M7 Transcriptional regulator, AraC family with amidase-like domain n=22 Tax=Burkholderia RepID=A0B2M7_BURCH Length = 355 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 57/105 (54%) Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 D + R ++ +++ + A++++ S+ ++A + S+ L+R+F Y +P YYL Sbjct: 243 DARVGFSRAELIEVVRLMEANIEEPLSLEELARLVRLSQRHLQRMFKVYLNVSPTHYYLT 302 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 RL A LL+ S+ V F HFSKA++ +FG+APS Sbjct: 303 LRLKRARDLLRTTDASIARVTTVCGFHSPCHFSKAYRAQFGHAPS 347 >UniRef50_B2S6F3 Transcriptional regulator, ARAC family n=48 Tax=Rhizobiales RepID=B2S6F3_BRUA1 Length = 374 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 54/98 (55%) Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241 Q ++ +I + A+L + ++ ++A TI S + RLF + G++P YYL+ RLD A Sbjct: 264 QNSKVLTIIEMMEANLSEPQALINVAHTIGLSRRQVERLFRQEMGRSPARYYLEIRLDRA 323 Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 LL Q V EVA F + HFSK ++ +G +P Sbjct: 324 RHLLLQSSMPVVEVAVACGFVSASHFSKCYRELYGRSP 361 >UniRef50_Q2CGL8 Transcriptional regulator, AraC family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGL8_9RHOB Length = 253 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 55/101 (54%) Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 P+ + +I + A+L+ +V ++AA SE+ RR F + G P+E+ L RL Sbjct: 147 PRFEKFRDVIRKIEAALETPPTVPELAAMANMSESHFRRSFKQVFGVAPQEFILQQRLRQ 206 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 A +LL + S+ +VA T F D HFS+ F+ FG +P + Sbjct: 207 AATLLTRTNRSIAQVALTCGFGDQSHFSRQFRRFFGESPRS 247 >UniRef50_B1JB07 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas putida W619 RepID=B1JB07_PSEPW Length = 345 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 56/111 (50%) Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229 I L+++D K ++ + + +H ++ S+A++A E L RLF ++ G TP Sbjct: 225 IPLLHSDSKAFALDGKVRRAVFLMHQHIRAPLSIAEIAEKANIGERQLSRLFTKHLGVTP 284 Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 EYY RL+ LL+ N V +VA F D HF++ F +G PS Sbjct: 285 SEYYRRVRLEQGCWLLESTANPVTQVAYETGFTDLSHFNRQFSQAYGMLPS 335 >UniRef50_A8TRB7 Probable transcriptional regulator n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRB7_9PROT Length = 344 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 47/93 (50%) Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 +I+ + +L++ S D+A S L RLF +Y G TP YYL RL A LL Q Sbjct: 223 VISEMELNLEEPLSQTDLAERAGLSTRQLERLFRKYLGATPTRYYLTLRLQRARQLLVQT 282 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 S+ VA F + HFSK ++ FG P A Sbjct: 283 SMSILSVALACGFVSASHFSKCYRECFGRTPRA 315 >UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales RepID=D1PEF6_9BACT Length = 291 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 14/241 (5%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQY 110 D +K I + + +Y +G G + + + I L P + HSYH G W+ Y Sbjct: 46 DLQKGRILDEYQLLYQPEGEGVFCSAHLPETKIKAGDIFLLFPGEWHSYHPSGTKGWKSY 105 Query: 111 WMEFTPTSMMD-IPVG----QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI 165 W+ F ++ D + G ++ + + G Y+ E+ + E + A + I Sbjct: 106 WIGFKGKNIDDRVKAGFLSPEKPIYHVG--YSNEIIALYEEAYKTAQEEVAFAQQTMAGI 163 Query: 166 IYQWICLMYADGK-----KDPQR-RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 + I MY+ + KD + I K + SL+ ++ ++A + S + R+ Sbjct: 164 VNHLIGKMYSLERNIVLSKDTKHVDMINKARLRIRESLEDTLTIQEIAQELGISYSSFRK 223 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 LF +TG P Y + +L A LL S+ E+A LNF +FS FK + G P Sbjct: 224 LFKEHTGFAPALYQQNLKLQRAKELLSTTDESIKEIAYRLNFESPDYFSAKFKIQTGMKP 283 Query: 280 S 280 S Sbjct: 284 S 284 >UniRef50_A3W1D7 Transcriptional regulator, AraC family protein n=3 Tax=Rhodobacteraceae RepID=A3W1D7_9RHOB Length = 342 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%) Query: 178 KKDPQRRQIE-----------KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226 ++ PQR I + I + +++ S+ D+A CS + RLF++Y Sbjct: 223 ERGPQRASISNALDSRNPLLVRAIKVMQTNIETPISMDDLADAAGCSRRQMERLFVKYLR 282 Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 KTP ++ D RLD SLL++ SV E+A F F K F+ +FG++P Sbjct: 283 KTPYRFFRDLRLDHGRSLLRETDLSVTEIAMASGFASPMVFIKTFRSRFGHSPG 336 >UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE Length = 291 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 4/132 (3%) Query: 151 EAIKNNLAVAFLTK-IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209 E++ N LAV+FL Q Y G D + + + IA +L+Q +AD+A Sbjct: 159 ESLANALAVSFLRNHASTQPQVAQYESGLGDRKLLLVTRYIAD---ALEQDIKLADLAQL 215 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 + S++ R F + G TP +Y L R++ A LLKQ S+ ++A F HFS+ Sbjct: 216 VGVSQSHFSRQFKKSMGLTPYQYLLQQRIERAKQLLKQTQQSLVDIALVCGFDSHSHFSR 275 Query: 270 AFKHKFGYAPSA 281 F+ G PSA Sbjct: 276 QFRKATGMTPSA 287 >UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGA4_EUBSP Length = 295 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 53/255 (20%), Positives = 117/255 (45%), Gaps = 19/255 (7%) Query: 41 ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100 A +HYR ++K+ A ++ +Y +G G I ++ GE + + + H Y Sbjct: 47 ARDHYR-----ERKEG--AEQYILIYCTEGKGTIEVE-GEVFEMRKSGAFCIPCKKGHRY 98 Query: 101 HCEGL-VWEQYWMEFTPTSMMDIPVGQQSVI-YNGEIYNQELTEVAELITSPEAIKNNLA 158 + + W W+ F + P+ + V+ N + + + L+ ++ N Sbjct: 99 YADAKDPWSILWVHFKGENTAYFPIDEPHVVPMNSRHSDNRMMVLFNLLF--RVLRRNYT 156 Query: 159 VA---FLTKIIYQWICLMYADGKKDP---QRRQIEKLIATLHASLQQRWSVADMAATIPC 212 + ++++++ + +Y K D Q R + +I ++ +L + ++ +++ + Sbjct: 157 LGNFIYISQVLSLILSEVYYREKVDESSVQDRHVTMVIRFMYENLTRSLTLEEISEEVQL 216 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 S ++L +F TG++P E+++ ++ A LLK + EV+ L + D ++FS+ FK Sbjct: 217 SRSYLNTIFKNQTGRSPVEFFIHLKMQEACKLLKNTNLYIYEVSSRLGYEDQYYFSRIFK 276 Query: 273 HKFGYAPSAVLKNTD 287 G +P KN D Sbjct: 277 KVVGVSPKD-YKNGD 290 >UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=Serratia RepID=A8GGG4_SERP5 Length = 282 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 16/251 (6%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114 P + ++ Y + G G + + G + G + + P D+ +Y + W W+E Sbjct: 33 PAVRQHYLFHYVISGTGVLHSEYGAFPVVAGEGFL-IHPHDVTTYRADKKDPWHYMWLEV 91 Query: 115 TPTSMMDI----PVGQQSVIYNGEIYN---QELTEVAELITSPEAIKNNLAVAFLTKIIY 167 I + +Q IY + Q L+ + +L++ + ++ L L+ + + Sbjct: 92 DGLVAGKIFEECRLSRQFPIYRPRKTDETPQALSYLRQLVSHDD--EHRLKTLGLSYLFF 149 Query: 168 QWI---CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 + L +D + + + K + + + ++ +AA + ++L RLF Sbjct: 150 SALIDNALQGSDEHPSDKTQHLHKAVKLIENRYHEHLTIERLAAYCNINRSYLCRLFKGA 209 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 G PKEY L+ R+ LA SLL+ ++ V ++ + + HFSKAFK G +P A + Sbjct: 210 YGIGPKEYLLNFRMTLATSLLRNSRTAIKVVGISVGYENQLHFSKAFKQVHGVSP-AQWR 268 Query: 285 NTDQHPTDASP 295 +Q P +ASP Sbjct: 269 QENQ-PDNASP 278 >UniRef50_A3SJ23 Transcriptional regulator, AraC family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ23_9RHOB Length = 343 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 49/94 (52%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + + I + L+Q S+ +++ S+ L RLF Y G+TP YY D RLD A L+ Sbjct: 225 VRRAITEMERHLEQPLSLPEISDRAGLSQRQLERLFRTYVGRTPALYYRDIRLDRARGLV 284 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 Q + +VA F HFS+++K +FG P Sbjct: 285 TQTEMPLAQVALASGFSTQVHFSRSYKERFGLPP 318 >UniRef50_B4D5Y6 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5Y6_9BACT Length = 297 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 27/245 (11%) Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMM 120 + + +G G +LL G++ L + P H+ E G +Y+++F Sbjct: 61 YAVEFVAEGEGSLLLA-GKRCRLRPGVVFAYGPRVPHTIRTEPGRPMLKYYVDF------ 113 Query: 121 DIPVGQQS--VIYNGEIYNQELTEVA---ELITSPEAIKNN----------LAVAFLTKI 165 VG+++ ++ +G + L +V+ E+ E+++ N L A + + Sbjct: 114 ---VGRRAKELLEDGPVRPGRLAQVSTPGEIREIFESLQRNGGGESPFGPALCAALIPVL 170 Query: 166 IYQWICLMYADGKKDPQRRQI-EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 + + G DP+ ++ A + A + ++ D A + ++L RLF R+ Sbjct: 171 LLKIAERAVPAGGADPRALATYQRARALIDARFLEFKTLDDAARAAGVNLSYLCRLFQRF 230 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 +TP + L +++ A LL +G V E A L F D F+FS+AF+ FG AP L Sbjct: 231 DHQTPYRHLLHLKMNRAAQLLLDRGMLVKEAAAELGFSDPFNFSRAFRSVFGLAPEKFLA 290 Query: 285 NTDQH 289 T + Sbjct: 291 RTQRR 295 >UniRef50_B1F7R4 Transcriptional regulator, AraC family n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1F7R4_9BURK Length = 301 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 51/102 (50%) Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 + DPQR I+ I + +L +A+ S A R F + TG TP +Y L R Sbjct: 186 RADPQRLAIDAAIDEIADNLAIHIDSQTLASNAGVSVAQFTRNFQKATGLTPHQYRLHRR 245 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +++A LK G+S+ +AD L F D HF++ FK G P Sbjct: 246 IEVAKEKLKAGGDSLATIADELGFADQAHFTRTFKQFAGVTP 287 >UniRef50_Q1QUP9 Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUP9_CHRSD Length = 337 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 51/96 (53%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 Q+ K+I T+ +L+ S +AA + S L R F G TP YYL R++ A L Sbjct: 221 QLRKVIRTMRRTLETPLSAPALAALVGLSPRQLERRFKAELGVTPIRYYLWLRINRAHRL 280 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 L+Q SV EVA F HFS+A++ FG APS Sbjct: 281 LQQTDLSVAEVASCAGFGSLEHFSRAYRRFFGCAPS 316 >UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MQ0_JANSC Length = 313 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 25/269 (9%) Query: 28 SSGISLISLWHTY-ADEHYRVIWPRD----KKKPLIANSWVAVYTVQGCGKILLKNGEQI 82 S+G + ++ + Y A H P+D K + + ++ V+ +G G++ L +G + Sbjct: 36 SAGFTQVAPYAVYPAGTH-----PKDHLFSKTRGRVLQAYQIVFISKGRGRVELGSGRKA 90 Query: 83 T-LHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTSM-MDIPVG----QQSVIY--NG 133 +H + L P H Y E V W ++W+E T+ M + G + +I N Sbjct: 91 QEIHAGQVFVLFPNVWHRYAPEPSVGWTEHWVECKGTAFDMSLNAGLLDPGRPIIRHPNF 150 Query: 134 EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIE--KLIA 191 E + E+ L + +A+ N ++ L+ + I + +D R + ++I Sbjct: 151 EAVHDTFAEIHGLAGT-DAVGNQPVLSMLSLKLLA-ILAGPRNANEDSTNRLVNSARMIL 208 Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251 H + Q+ + D+A + S + LRR F TG + K+Y + R+ A LL S Sbjct: 209 LEHCTGQR--PMEDIADELNVSYSTLRRTFRVQTGMSMKDYQMAMRIQKAKDLLDNTELS 266 Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 V VA L F +FHFS F+ G PS Sbjct: 267 VKGVAGQLGFSSAFHFSSQFRKTVGCPPS 295 >UniRef50_C6BZV3 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZV3_DESAD Length = 285 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 22/241 (9%) Query: 66 YTVQGCGKILLKNGEQI----TLHGNCIIFLKPMDIHSYH-----CEGLVWEQYWMEFTP 116 Y + GC IL I T+H N + + S++ L ++ E P Sbjct: 47 YCLNGCSDILQPGSISIIEPETVHSNSPCCTERRHLRSFYFSEKFVRSLNYKLLGDENVP 106 Query: 117 TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + +I + + + N + + +L E + + EAI + L+ +Y+ D Sbjct: 107 SPFRNILLENKQLWQNLSVLHHKLLSPVETLETDEAILSVLSG------LYRHA----GD 156 Query: 177 GKKDP--QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 G P + R++ ++ LHA ++ S+A++A C+E L R+F + G TP + + Sbjct: 157 GTIRPGSEDRRVSMIVDYLHAHAERNLSLAELADLAGCTEFHLIRIFRSHKGMTPHSFLI 216 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294 RL+ A +++ + + + A F D H ++ FK ++G P K + P Sbjct: 217 QLRLEKARAMIATN-SPIADTAALCGFSDQSHLTRLFKIRYGLTPRQYQKASGGPPGSKE 275 Query: 295 P 295 P Sbjct: 276 P 276 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261 S+ D+A ++ S + L R+F+ GK+P +Y + R++ A LL+ S+ EVA ++ F Sbjct: 191 SIDDVAKSVGVSRSHLYRVFMLNVGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGF 250 Query: 262 FDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASP 295 FD F+FS+ FK G PS Q ASP Sbjct: 251 FDQFYFSRVFKRAKGVPPSKYFA-AQQDADPASP 283 >UniRef50_C6CVX7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVX7_PAESJ Length = 308 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 60/109 (55%) Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 K+ + R + +++ + L + S+ +++ T+ + L+ F R+TGKT EYY + Sbjct: 178 KEKEEARLVSAIVSLMEERLSSQLSLLEISRTLHIANTKLKEQFKRHTGKTVMEYYAHMK 237 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 L+ A L+++ G++ E+A L F +FSKAFK G +PS K+ Sbjct: 238 LEKAKLLIREDGHNFTEIALQLGFSSVHYFSKAFKRSTGMSPSEYAKSV 286 >UniRef50_A6CZ62 Transcriptional Regulator, AraC family protein n=4 Tax=Gammaproteobacteria RepID=A6CZ62_9VIBR Length = 301 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 54/106 (50%) Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242 + Q+ K+ + ++ +V D+A + CS+ + R F + G TP +Y ++ RL+ A Sbjct: 196 QHQVSKIDQYIEENIGNNIAVDDLAELLGCSKFYFLREFKKLIGVTPYQYLMNKRLEQAR 255 Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 L ++ A L F D HF++AFK+ FG P +KN + Sbjct: 256 VALSSAPVNIALTAHELGFNDQSHFTRAFKNHFGITPGQYIKNNEN 301 >UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CX81_PAESJ Length = 272 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 15/236 (6%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114 P I + + + +G G + + + G + P + SY + W W+ F Sbjct: 36 PGIRDHYKVHFVHRGTGTVQIGSSTFKLTSGQAFL-AYPGKVISYQADAFDPWSYSWIGF 94 Query: 115 TPTSMMDIP-----VGQQSVIYNGEIYNQELTEVAELITSPEAIKN------NLAVAFLT 163 + ++ ++SV + + L E+ L+ S + KN +L + FLT Sbjct: 95 RGEQVGEVLERTKLTSEESVFPMDKQFMPNLYEL--LLESADHPKNHDLRLTSLLIEFLT 152 Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 +I A + Q I + + +H+ + +V MAA++ +L LF Sbjct: 153 VLIDSLPSSADAGVQPRKQDTYIHRSLDFIHSHFSEPITVQQMAASLGLDRKYLSYLFKE 212 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 G P++Y L+ R+D A LL++ S+GEVA ++ + D+ FSK FK G P Sbjct: 213 AMGLPPQQYLLNYRMDRAGELLRKGEYSIGEVARSVGYQDALLFSKMFKKLKGVPP 268 >UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3X5_9BACT Length = 286 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 55/102 (53%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 ++++ A A+L + SV D+A CS R F + GK+P E+ D ++ LA+ LL Sbjct: 184 LKRVHAYALANLSRPLSVGDLADAAGCSRWHFSRRFQQLEGKSPHEFVTDLKMRLAVRLL 243 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 + SV EVA+ F D+ +F K F++ +G +P+ + Sbjct: 244 QTTNGSVKEVAENCGFEDASYFCKVFRNHYGVSPAGFRSGAE 285 >UniRef50_Q2BYZ8 Transcriptional regulator, AraC family protein n=6 Tax=Vibrionaceae RepID=Q2BYZ8_9GAMM Length = 293 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 5/123 (4%) Query: 173 MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232 +Y +P+ R I +LI Q++WSV DMA + +++ LRR L G + + Sbjct: 159 VYRFNYDEPKERTIARLIT---QDPQRKWSVDDMAKALFTTQSTLRR-HLAKEGVSFSQL 214 Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292 LD R+ LAL+ L S+ ++++ F + +F AFK K+G PS + T + D Sbjct: 215 LLDVRMGLALNYLTFSNYSISQISNRSGFGSAAYFCDAFKRKYGITPSQ-FRTTSRQEND 273 Query: 293 ASP 295 +P Sbjct: 274 VNP 276 >UniRef50_D1N8U7 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8U7_9BACT Length = 298 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 48/97 (49%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +I L+ TL A WS+ MA S A RR F R G+ P + L RL+ A + Sbjct: 187 RIASLVKTLEADFAGEWSLRRMAEHTGFSVACFRRQFRRIIGEPPVAWLLSLRLEKAAMM 246 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 L+ S+ E A+ F DS +F++ F +FG P A Sbjct: 247 LQTGDGSIAETAEACGFPDSNYFTRMFHRRFGATPRA 283 >UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales RepID=A6LBM0_PARD8 Length = 295 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 27/247 (10%) Query: 58 IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTP 116 I N + VY +G G ++ + ++ +I L P + HSY+ + W++YW+ F Sbjct: 57 ILNEYQLVYITKGSGYFSSQSCKSQKINAGTMILLFPGEWHSYYPDRETGWDEYWVGFRG 116 Query: 117 TSM----------MDIP---VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163 + + P +G + I +Y L +E + + + +++ + L Sbjct: 117 IHIDKRVEKKFFTKEEPLHRIGLSATIVG--LYEDILKFASEEKSGYQQMISSIVLHILG 174 Query: 164 KIIYQW----ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 + Y+ Y K + R + +++ S ++AA + +W RR Sbjct: 175 SVYYKEKNNSFTNTYVVDKINEAR-------ILMKENIEDPLSPEEIAARLGLGYSWFRR 227 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +F YTG +P +Y L +L A LL ++ E+A +L+F ++ FS FK K G P Sbjct: 228 MFKEYTGVSPAQYQLQQKLLRAKELLTSTPLTISEIAYSLHFENAGQFSTFFKKKEGVTP 287 Query: 280 SAVLKNT 286 S T Sbjct: 288 SEFRDRT 294 >UniRef50_A7VPJ2 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPJ2_9CLOT Length = 250 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 48/88 (54%) Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 +H + + ++A S ++L ++F ++TGKTP +Y D R+ LA LL+ S+ Sbjct: 156 IHKHYMELLELGEIAEKFGFSVSYLTKIFTKFTGKTPSKYIRDYRISLAKQLLRNPNLSI 215 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPS 280 V + + D FHFSK F+ G +PS Sbjct: 216 SVVGKKVGYPDQFHFSKIFRQATGMSPS 243 >UniRef50_A6E5Z6 Probable transcriptional regulator n=1 Tax=Roseovarius sp. TM1035 RepID=A6E5Z6_9RHOB Length = 327 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 53/94 (56%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + K + + +++ S A++A +I S L RLF R+ GK+P+ Y D RL A +L+ Sbjct: 226 LRKALKAMETNIEFPQSTAEIAQSINLSARQLERLFARHLGKSPQAYSRDLRLHRARTLI 285 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 + S+ E+A + F S HFS+ FK ++G P Sbjct: 286 EGSSLSLTEIALSCGFEGSAHFSRLFKQRYGMTP 319 >UniRef50_Q0SE50 Transcriptional regulator, AraC family protein n=8 Tax=Nocardiaceae RepID=Q0SE50_RHOSR Length = 315 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 4/148 (2%) Query: 139 ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQ 198 +L E A+L+ +P + LA A + I G P+ R +++++ L+ Sbjct: 169 QLREPADLLANP-VVGPQLAGAITSAFILAVTPDEEVRGGA-PRPRIVKRVLDGLNDDPA 226 Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLK--QQGNSVGEVA 256 + W+ ADMA S L+ F Y G++P E LD RL A + L+ + G +V EVA Sbjct: 227 RAWTAADMAELAGTSVRRLQEGFREYVGRSPSECLLDIRLSRADADLRALEPGVTVSEVA 286 Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 F + FS A++ ++G +PS +++ Sbjct: 287 ARWGFTHAGRFSAAYRRRYGKSPSELIR 314 >UniRef50_A1B7U6 Transcriptional regulator, AraC family n=5 Tax=Alphaproteobacteria RepID=A1B7U6_PARDP Length = 322 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 52/96 (54%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 Q+++L A L +R +VA+MA ++ SE+W +F TG TP ++ L R+DL L Sbjct: 218 QMKRLQARLATRPDRRLTVAEMAESVGLSESWFAHVFKNTTGTTPLQWQLGQRIDLVQRL 277 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 L + + ++A L F D H ++ F+ G P+ Sbjct: 278 LLESDLRLADIAAQLGFSDQAHLTRVFRKSCGEPPA 313 >UniRef50_C2AR01 DNA-binding domain-containing protein, AraC-type n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AR01_TSUPA Length = 289 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 50/103 (48%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 I + +HA +++W+VA++A S + F R G P Y D RLD A L Sbjct: 186 HIGPALTAIHAHPERQWTVAELARIALLSRSAFAARFTRLLGVAPAGYVADRRLDRAAEL 245 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 L+ VG+V T+ + FS+AF +FG P A + T+ Sbjct: 246 LRDSALPVGDVGRTVGYGSEAGFSRAFARRFGVPPRAWRRATE 288 >UniRef50_B5XWK6 Transcriptional regulator, AraC family n=5 Tax=Klebsiella RepID=B5XWK6_KLEP3 Length = 306 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 3/119 (2%) Query: 177 GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDA 236 G DP+ + + I LH + +RW+V D+AA S + L F TG TP Y L Sbjct: 191 GLSDPR---VAQAIRLLHQAPARRWTVNDLAADCALSRSTLFERFTDLTGMTPMGYLLGW 247 Query: 237 RLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASP 295 R+ LA+ L + G S+ ++A+ + + + FS AF G +P + P P Sbjct: 248 RMTLAMQWLSETGISIADIAERIGYGSASAFSVAFTRYTGISPGKYARQRATQPPPGQP 306 >UniRef50_Q1GGF5 Transcriptional regulator, AraC family with amidase-like domain n=13 Tax=Rhodobacterales RepID=Q1GGF5_SILST Length = 335 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 47/87 (54%) Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 + S+++ S+ + A + S L RLF RY ++P Y D RL A +L+ + SV Sbjct: 241 MQESIEEPLSIGTLCARLDISRRQLERLFSRYLDQSPMHVYSDMRLSHAFALMNETSMSV 300 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAP 279 E+A F + HFS+ FK KFG +P Sbjct: 301 TEIALASGFNSATHFSRQFKRKFGASP 327 >UniRef50_C0A9I7 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9I7_9BACT Length = 271 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 13/238 (5%) Query: 49 WPRDKKKPLIANSWVAVYTVQGCGKIL-LKNGEQITLHGNCIIFLKPMDIHSYHCEGLVW 107 WPR + K + + V+G + + + GE++ H I+ + P ++H+Y Sbjct: 43 WPRRRLK-----EFELILAVRGEFEFINHETGERVEQHAGDILVIHPGELHTYRLLSSAE 97 Query: 108 EQYWMEFTPTSMMDIPVGQ---QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164 ++ +P+ Q + + E EL A+ + + + +A + + Sbjct: 98 HAFFSCIHCMMTPRVPLDQCPPRLTHWETEHAMGELFRRADDLRRTNGLGSGKLLAGVVR 157 Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 +I+ ++ + + P ++ ++ L A L + S D+A + + +F Sbjct: 158 LIWLYL----QEPPRPPADARLTAMLDYLEAHLHKHPSRLDLAQRFRMTPQRINAIFKHE 213 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282 G +P Y L A A +L++ SV E A L F + FHFS+ FK +G+ PS + Sbjct: 214 LGMSPGAYVLRALAGRAYALMRDDQLSVKETAHRLGFANPFHFSRVFKKIYGHPPSEI 271 >UniRef50_C6B4M4 Transcriptional regulator, AraC family n=8 Tax=Rhizobium RepID=C6B4M4_RHILS Length = 299 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/272 (22%), Positives = 118/272 (43%), Gaps = 38/272 (13%) Query: 37 WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP-- 94 WH + H R+ +K L A+ + +G G++ NGE LHG + FL P Sbjct: 15 WHAPSLSHRRIRL----QKGLYADFHHFLLLGEGSGELHFDNGEHRPLHGPLLAFLPPQA 70 Query: 95 ---MDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE-----------L 140 + I + LV +P M+D +G + Y+ I+ ++ + Sbjct: 71 RCDLSISAGTAAHLVGA------SPQIMVDA-IGDKVESYSLRIFTEQRKLVEALDPLTV 123 Query: 141 TEVAELITS-PEAIKNNLAVAFLTKIIYQWICLMY----ADGKKDPQRRQ------IEKL 189 TE++ LI+ + + +++ Y + LM +DG++ QR Q +++ Sbjct: 124 TEISPLISGFVRELGDPSRSSWMVASAYIRLMLMALWRGSDGERSEQRGQGEVGSILQRY 183 Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249 + A +Q ++D AA + + L R G++P + + + A L++ Sbjct: 184 RQLVEAGFRQHRPISDYAAELGVTADRLHSTCQRALGRSPIQLLHERVVQEAKLRLERSA 243 Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 ++ E++D+L F D +FS FK K G +P+ Sbjct: 244 RNIQEISDSLGFRDPTYFSHFFKRKTGLSPAG 275 >UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDF7_9BACT Length = 274 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 19/269 (7%) Query: 25 NVISSGISLISLWHTYA-----DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNG 79 +++ +G +LIS TY +HY W R + + + + + +G G I + Sbjct: 2 DILGAGSALISKGDTYPPSIHPSDHY-FDWMRGR----VLDEFQLLLITKGSGTIETEAT 56 Query: 80 EQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFTPT-------SMMDIPVGQQSVIY 131 + T+ + L P H Y + W ++W+ F T S + P Sbjct: 57 DSFTITAPIVFLLYPGVWHRYRPSQDTGWHEHWIAFRGTFADELLRSGLISPEKPFHKTG 116 Query: 132 NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-MYADGKKDPQRRQIEKLI 190 + E ++ + + + + ++A A L +I+ I L + + P R+ I + Sbjct: 117 HSETLLAQVQLIQDEVRAEAHGYRSIAAAALMQILALAITLPQRREEENQPMRKVIRRAC 176 Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250 + + ++AA + + RR+F ++TG +P Y+ RL LL+ N Sbjct: 177 FLMRERSDRPLMPEELAAELNIGYTYFRRMFRKFTGISPNRYHAQLRLRRVKRLLRDTSN 236 Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 S+ E+AD L F +H S FK + G +P Sbjct: 237 SIVEIADVLGFNSPYHLSNWFKKETGRSP 265 >UniRef50_A8LK68 HTH-type transcriptional regulator n=43 Tax=Rhodobacterales RepID=A8LK68_DINSH Length = 339 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 53/95 (55%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 ++ K+I + A++++ S + +A+ I S L RLF RY ++PK YY++ RL A +L Sbjct: 232 RLSKVIQMMEANIEEPISPSVLASDIGMSTRQLERLFRRYLNRSPKRYYMELRLQKARNL 291 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 L Q SV VA F HFSK ++ ++ P Sbjct: 292 LMQTDMSVINVALACGFTSPSHFSKCYRSQYNTTP 326 >UniRef50_A9C0Z2 Transcriptional regulator, AraC family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C0Z2_DELAS Length = 356 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 9/152 (5%) Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP-----QRRQIEKL 189 +++ E T P A+ + L V L Y L + D + +R L Sbjct: 200 LFDLMRAEALRTGTEPSAVMDRL-VGLL--FFYGLRQLAHGDARARGIWSLLRRPGFAPL 256 Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249 +A L + WSVADMAA + S A R F G+ P+++ L R+ LA L QG Sbjct: 257 VAELLREPARNWSVADMAARVCLSRATFFRQFAEACGQPPQQFLLLLRMQLAARRLA-QG 315 Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 ++G+VA+ + + FS+AFK G P A Sbjct: 316 EAIGQVAEAVGYESYAAFSRAFKRVMGEQPGA 347 >UniRef50_Q7UU29 Probable lactose operon transcription activator n=1 Tax=Rhodopirellula baltica RepID=Q7UU29_RHOBA Length = 298 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 5/153 (3%) Query: 138 QELTEVAELITSP---EAIKNNLAVAFLTKIIYQWICLMYA--DGKKDPQRRQIEKLIAT 192 +ELT++ +I++ + ++ V+ +T+ + I + DG E + Sbjct: 145 KELTDLFSIISAEGKDDQFRSRDIVSLITRAMIIKIAQRKSTTDGDSPKAFEVYEDIRQY 204 Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 + + + S+A +A + ++ RLF RY + +Y L R++ A LL QG V Sbjct: 205 MEDNFRDLTSIAQVAEQCGYTTVYVSRLFKRYASRGAYQYLLRLRMNYAADLLFTQGMKV 264 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 +VA+ L F D+F FS+AFK +G PS + ++ Sbjct: 265 RDVAEMLQFADAFQFSRAFKRVYGVPPSQLKRS 297 >UniRef50_Q3IVG7 Transcriptional regulator, AraC family with amidase-like domain n=5 Tax=Rhodobacteraceae RepID=Q3IVG7_RHOS4 Length = 316 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 3/114 (2%) Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 Q + L G ++ + + IA + A +++ S +A + S L RLF R+ Sbjct: 200 QRVSLQSRHGMRNAH---LSRAIALMEAHVEEPLSPFALADRLGISTRQLERLFGRFLNT 256 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 +PK Y ++ RL A L+ Q S+ E+A F + HFSK F+ ++G AP A Sbjct: 257 SPKRYMMEVRLTRARHLIVQTEQSISEIAMACGFTSTSHFSKVFRSRYGVAPVA 310 >UniRef50_A7B5D7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B5D7_RUMGN Length = 289 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 10/135 (7%) Query: 161 FLTKIIYQWICLMY---------ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211 + ++II ++C ++ + P I L+ +L + +V+++A Sbjct: 154 YYSQIIVSYLCQLFLSLAEQGTLSSVSSVPDAITFRNAINFLNTNLDCQPTVSEIAEYCN 213 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 S+A L+R+F +Y G + +Y L ++++A LL Q G V VA+ L F +FSKAF Sbjct: 214 ISDASLKRIFDKYAGISVHKYLLKLKINVAKKLL-QDGGQVSVVAENLGFASQSYFSKAF 272 Query: 272 KHKFGYAPSAVLKNT 286 K + G+ PS KN+ Sbjct: 273 KRETGFTPSDFAKNS 287 >UniRef50_D1N547 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N547_9BACT Length = 288 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 51/97 (52%) Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 L+ L + ++ W+V +MA SE+ RR F YTG PK Y +L LA +L Sbjct: 188 LLVELRRTPERWWTVGEMAKECGLSESHFRRAFHAYTGMPPKLYLDRMKLQLAAEMLIST 247 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 G ++ +VA + D FHFS+ FK G +P + ++ Sbjct: 248 GLTLAQVAARFGYVDPFHFSRRFKALNGMSPDSYRRH 284 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 3/105 (2%) Query: 182 QRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 QRRQ + + L ++ ++ +A S +L ++F TG +P Y ++ RL Sbjct: 169 QRRQQQIVNYTVYYLENHYKEEITLEKLAQDQFLSPTYLSKIFKEATGVSPINYLIEIRL 228 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 A +LK + ++ EVA + + D++HFSK+FK +G +PS VL Sbjct: 229 KRAKDMLKNENLTIKEVASAVGYQDAYHFSKSFKKLYGVSPSGVL 273 >UniRef50_D2PRH8 Transcriptional regulator, AraC family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PRH8_9ACTO Length = 271 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 18/226 (7%) Query: 68 VQGCGKILLKNGEQITLHGNCIIFL---KPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPV 124 + G G+I L + G C +F P H LV + M F P D P Sbjct: 46 LDGIGRIELDGRTRDLAPGTCAVFAPGDAPRAQHDPRRRLLV---FGMHFEPDG--DGPA 100 Query: 125 GQQSVIYNGEIYNQEL-------TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177 + G++ ++ L + A ++ L + + Q +C ++ Sbjct: 101 SVVPEVRWGDVPDRVLLGALAKACDAAYRRQDAAGGQDRLGLRQAELCLEQILCSIWEAA 160 Query: 178 KKDPQRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 + Q I+++ + + WSVA+MAA S A R F+ G++P +Y + Sbjct: 161 HRSGQSASDAAIDEVAQLIRQDPGRDWSVAEMAAAAALSRAQFTRRFVAQHGRSPAQYLI 220 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 AR+D A LL + G +V A L + D +FS+ +K + G PS Sbjct: 221 QARIDRAHQLLTESGMTVTRTAAALGYTDVPYFSRQYKQRTGRLPS 266 >UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=A9KN44_CLOPH Length = 278 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/247 (22%), Positives = 109/247 (44%), Gaps = 14/247 (5%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104 Y+ P + P + + ++ Y V G G N + L + + P +Y+ + Sbjct: 28 YQRCEPNYQWGPGVRDHYLIHYIVSGKG-YYETNHKTFPLTSGDVFLIYPDTQVTYYADA 86 Query: 105 L-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159 L WE YW+ F+ + + +S + + Y +++ + +L EA N A Sbjct: 87 LDPWEYYWVGFSGSDAGLILEATDFSNESPVISSCSYGEKVKD--QLYQIYEARGNEFAN 144 Query: 160 AF-LTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWSVADMAATIPCS 213 A + +Y + L + ++ ++K I + + ++ D+AA + S Sbjct: 145 AVAMAGQLYITLSLFLSGASNHNKKHHQNLDYVQKGITYMESHFSYPITIDDVAAYVGIS 204 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 + L R F + GK+PKEY + R+ + +LLK S+G +A ++ + + ++SK F+ Sbjct: 205 RSHLFREFKAHLGKSPKEYLSEYRIKYSCTLLKNTDLSIGAIATSVGYDNGLYYSKVFQS 264 Query: 274 KFGYAPS 280 G PS Sbjct: 265 VKGMPPS 271 >UniRef50_Q2S8T9 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8T9_HAHCH Length = 278 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 10/142 (7%) Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWIC----LMYADGKKDPQRRQIEKLIATLHASLQQR 200 + I P+A + +A + +++ QW+ + ++ + D QR K+ + A ++ Sbjct: 132 QAIKEPQATPDLVAEHRVCELL-QWLANAGYVFRSNERADIQR----KVRLLIGAEPDKK 186 Query: 201 WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLN 260 WS D+A ++ SEA LRR + G E +D R+ LALSLL+ ++ +A + Sbjct: 187 WSSQDIAESLALSEATLRRKLAK-EGNAFSEILVDVRMSLALSLLQSTDAAIASIAYQVG 245 Query: 261 FFDSFHFSKAFKHKFGYAPSAV 282 + + FS FK +FG++P+A+ Sbjct: 246 YESASRFSVRFKQRFGFSPTAI 267 >UniRef50_P43465 Raffinose operon transcriptional regulatory protein rafR n=9 Tax=Lactobacillaceae RepID=RAFR_PEDPE Length = 277 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 13/235 (5%) Query: 58 IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTP 116 + +S+V Y +G G N L I L Y + W+ +W+ F+ Sbjct: 36 VRDSYVIHYIQEGKGTFAAANHPATVLKAGDIFILPKGTPCFYQADNDQPWKYFWIGFSA 95 Query: 117 ----TSMMDIPVGQQSV----IYNGEIYNQELTEVAELITSPEAIKNNLAV-AFLTKIIY 167 +M+ + Q + NG IY +L+E+ +++ P ++ N++ + + + ++ Y Sbjct: 96 GIRIEAMLSGSLLAQKCYLRQVQNGHIY-ADLSELYKVLHIPNSLINDVLLGSLIYRLFY 154 Query: 168 QWICLMYADGK--KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225 + AD K Q ++ L + ++ D+ + S ++L LF + Sbjct: 155 DLLRWYPADATNIKVKSTEQFNLAVSYLQENYSTGCTIMDLCHYLNLSRSYLYTLFKTHA 214 Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 +P++ RL+ A L NSV +A+ + + DSF FSKAFK G +PS Sbjct: 215 NTSPQKLLTKLRLEDAKQRLSTSNNSVQSIANMVGYKDSFTFSKAFKRYSGASPS 269 >UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C01F8 Length = 265 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 58/100 (58%) Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 P + + KL+ + +L+++ ++ ++A + +L LF G+TP EY + +++ Sbjct: 157 PNQTVMGKLVKYIDENLERKITLTELAKFAHLNANYLCTLFSSTFGQTPIEYITNKKIEK 216 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 A LL+ +++ E+++TL F F+FS FK + GY+PS Sbjct: 217 AKILLRTTTDTIEEISNTLGFSSPFYFSAVFKKRIGYSPS 256 >UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales RepID=A6LD39_PARD8 Length = 297 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 17/233 (7%) Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPT--- 117 ++ +Y +G G +L +G++ + N L H Y E W YW F Sbjct: 58 YLLIYCTKGEGWYVL-DGKRYVVPENHFFILPAEKPHQYGSSEHDPWYIYWAHFKGKKAK 116 Query: 118 -------SMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI 170 ++ I + S I + + EL V E T EA N + ++F I Sbjct: 117 YISDQLQGVIPIDMDDNSRIGDRIAFFDELLNVLESGTD-EATVNYVNLSFNHLIASFLY 175 Query: 171 CLMYADGKKDPQRRQIEKLIAT----LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226 Y + K + + I+ + +L+ + ++ ++A+ SE+++ RLF + TG Sbjct: 176 VKTYREAKFSKSKAENTFFISLATHFMTENLENKLTLKELASHFGYSESYMYRLFFKETG 235 Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 P Y+L ++D A LL + +VA L F D ++FS+ FK G +P Sbjct: 236 YAPMNYFLHMKIDRACQLLLHTNMKINQVALKLGFDDPYYFSRIFKKIVGTSP 288 >UniRef50_B2JCG9 Transcriptional regulator, AraC family n=52 Tax=Burkholderia RepID=B2JCG9_BURP8 Length = 350 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 4/136 (2%) Query: 151 EAIKNNLAVAFL-TKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209 E I + + V L + Q I + A G++ P+ + + + A+++ + ++A Sbjct: 189 ERIADTMGVGTLRSGEERQRIPFVTAPGERHPR---LNDALLLMEANIEDPLTSDEIAGL 245 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 + S L RLF +Y G P +YYL RL A + L++ SV +++ F + HFS Sbjct: 246 VGVSRRQLERLFRQYLGSMPSKYYLGLRLAKARTQLQRTSKSVVQISLACGFSSAAHFSN 305 Query: 270 AFKHKFGYAPSAVLKN 285 A++ +FG P +N Sbjct: 306 AYRERFGVTPREERRN 321 >UniRef50_B9XCC3 Transcriptional regulator, AraC family n=1 Tax=bacterium Ellin514 RepID=B9XCC3_9BACT Length = 339 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%) Query: 158 AVAFLTKIIYQWICL--MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 A+ ++YQ + ++ D +K + +++K+IA L +L + + ++ + CS Sbjct: 198 ALEIAAAVLYQPVLREELFCDRQKRLSQERVQKVIAILKENLSEPPPLEEIGRRVGCSHF 257 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 +L R+F + GKT D R++ A +LL+ +V EVA + + HFS AF +F Sbjct: 258 YLSRIFTQAMGKTISAQLRDLRMERAAALLRDGRMNVTEVALEVGYSSLSHFSTAFHQEF 317 Query: 276 GYAPS 280 G P Sbjct: 318 GCCPG 322 >UniRef50_C9YV93 Putative transcriptional regulator n=2 Tax=Streptomyces RepID=C9YV93_STRSW Length = 313 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 47/92 (51%) Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249 + HA +RW+V +A S A + F + G P Y R+D A +LL Sbjct: 215 LEAFHARPSKRWTVEALATESGVSRALFAKRFTKVMGSPPLTYVSGCRMDEAEALLSDTD 274 Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 +S+ +A ++ + D+F FS AFK + G +PSA Sbjct: 275 SSIARIAKSVGYADAFGFSAAFKRRRGVSPSA 306 >UniRef50_C6JDE0 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDE0_9FIRM Length = 484 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 12/149 (8%) Query: 136 YNQELTEVAELITSP---EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIAT 192 YNQ E+A++I S E + + L K+I + C+ G K I++ + Sbjct: 333 YNQMEDEIADIIQSSYNREELYDKLE-----KMIIRMFCVEDYSGNKQKLALDIKEYLDH 387 Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN-S 251 + S+ +AD+ +P A+LR +F K+P EY + RL+ A +L Q+ Sbjct: 388 NYKSVTGNKELADIFGFVP---AYLRDVFRSKYEKSPMEYLQELRLECARKMLAQELKLP 444 Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 V E+A + F D+ + SK F+ KFG PS Sbjct: 445 VKEIARAVGFNDALYLSKVFRRKFGITPS 473 >UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG90_9FIRM Length = 298 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 48/100 (48%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 I K + LH + S+ D+A + W F Y G +P+ Y L+ R+D A L Sbjct: 180 INKTVTYLHEHYNEPISIIDLAKENHLTPNWFNHCFQEYYGMSPQAYLLNIRIDKAKEFL 239 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 S+ +VA + D+F+FS+ FK K G +P KN Sbjct: 240 TNYMLSISDVALLTGYSDAFYFSRIFKRKTGLSPQQYRKN 279 >UniRef50_C1DME1 Transcriptional regulator AraC family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DME1_AZOVD Length = 310 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 20/237 (8%) Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121 + +T+ G G + + G+ ++ L P D H Y E G WE +W+ + Sbjct: 60 IVQHTLAGEGDLRFEGRHHRLRAGDTMLVLVPHD-HCYWLETGGSWEFFWIAMYGKEALR 118 Query: 122 IPVG----QQSVIYNGEIYNQELTE-VAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + + V+ + + L E VA LI SPE + ++ L+ D Sbjct: 119 LQRALLDERGPVLRLSDKTIECLAENVAALIRSPELTAGRASALAYESLMALHDDLLVQD 178 Query: 177 GKKDPQRRQIEKLIAT-LHASLQ------------QRWSVADMAATIPCSEAWLRRLFLR 223 D R + I +HA L+ VA +A S + RLF R Sbjct: 179 VALDAARTGVIASIQNHIHACLRCEPDTLSPQAEDDELDVASLAQLAGLSRSHFSRLFAR 238 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 G +P +Y L+ R+ A LL+ SV +A ++ D +FSK F+H F +PS Sbjct: 239 TVGMSPAQYVLNERMKRAAHLLEATDLSVKAIALSVGIHDPNYFSKLFRHAFSLSPS 295 >UniRef50_Q1QTP1 Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTP1_CHRSD Length = 324 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 49/90 (54%) Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249 +A + A++++ + ++A + S L RLF +Y P YYL+ RL A LL+ Sbjct: 227 VALMEANIEEPLTTHELAEHLGISRRQLERLFKKYLQAVPSRYYLELRLQQARRLLRDSD 286 Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +VG++A F HFS A+++ FG +P Sbjct: 287 QAVGDIALATGFSSGAHFSTAYRNHFGISP 316 >UniRef50_Q01W15 Transcriptional regulator, AraC family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01W15_SOLUE Length = 327 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 9/147 (6%) Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM------YADGKKDPQRRQIEKLIATL 193 + E A EA+ L+ A + +++ + + G +DP + K + L Sbjct: 169 VEEAASGRVGSEAMLAKLSEALFVDTLRRYVAGLPDQQVGWLAGARDPI---VGKSLGLL 225 Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253 H+ + W++AD+A + S + L F RY + P Y RL LA L++ V Sbjct: 226 HSRVSHPWTIADLADEVGISRSALVERFTRYLSEPPMAYLTRWRLTLAARSLEKTSRGVA 285 Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPS 280 E+A + + F++AFK +FG P Sbjct: 286 EIAADVGYESEAAFNRAFKREFGSPPG 312 >UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368B4 Length = 289 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 47/230 (20%), Positives = 96/230 (41%), Gaps = 11/230 (4%) Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPTSMMDI- 122 +Y G + +L NG +T+ ++ P + Y + E +W+ FT D+ Sbjct: 52 LYIASGKAEFVL-NGAAVTIPAGNMVLYGPGEYQQYTYLLEDRPEVFWVHFTGYEAADLL 110 Query: 123 -----PVGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 + ++ G Y + + P + + + + +++ + Sbjct: 111 SRTGLSLEDFRILRTGCASRYQDLFLSMIRELQLPRPLSGDFSSLYFKELLLTVERQIAE 170 Query: 176 DGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 GK PQ ++++E + H + ++D AA++ S W R F +Y G P +Y Sbjct: 171 GGKNKPQIQKEMEHAVHFFHENFSADIDISDYAASLHMSTCWFIRSFKQYVGVPPLQYLT 230 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 R++ A LL+ V E+ + + + +FS+ FK + G +P+A K Sbjct: 231 SIRINKAKELLESTDCPVSEIGSIIGYENPLYFSRIFKKQTGLSPAAYRK 280 >UniRef50_B4S2K8 Transcriptional regulator, AraC family protein n=3 Tax=Alteromonadales RepID=B4S2K8_ALTMD Length = 284 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 12/228 (5%) Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM-----M 120 Y++ G GK +GE LH +I L W+ W+ T Sbjct: 59 YSINGEGKFRTPSGE-FALHEGQLIVLPANQSFEVSIVSAKWDIIWVNLADTERWKAFEK 117 Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180 D V + G + EL + E + + ++L +II +I + + +K Sbjct: 118 DCAVVVDNAALEGLHHAMELLYL-EHDSENRRAATTIVSSYLCRIIDVYIGHTHPNDEK- 175 Query: 181 PQRRQIEKLIATLHA---SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 +RRQI +L + A LQ W + ++ S L RL L+ G++PK++ + R Sbjct: 176 -ERRQINRLNSLFSAVDKQLQFDWDMKSLSEKAHYSAPHLHRLCLQAFGRSPKQHVIHLR 234 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + A SLL V +A+ + + + F FSK FK G +PSA N Sbjct: 235 MLRAKSLLLSTQWPVSYIANYVGYANVFTFSKRFKKSTGLSPSAFRCN 282 >UniRef50_D1W357 Transcriptional regulator, AraC family n=2 Tax=Bacteroidales RepID=D1W357_9BACT Length = 273 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 24/184 (13%) Query: 114 FTPTSM---MDIPVGQQSVIYNGEIY-----NQELTEVAELITSPEAIKNNLAVAFLTKI 165 F P +M ++IP S+ YN E+ N+ L E+A I E N++ ++++ K Sbjct: 88 FHPHAMSMFLNIPT---SLFYNQEVSGYSLENKSLNELATRIFDCE--NNSICISYVEK- 141 Query: 166 IYQWICLMYADGKKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 W+ AD D R +I+ I ++ + Q SV ++++ S+ RLF Sbjct: 142 ---WLVSQIADNLADTTHRIKRIDAAIQRIYITPQ--ISVNELSSIASLSKKQFERLFHS 196 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGN---SVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 + G PKEY R AL+ ++ Q + ++A T + D HF + FK GY P Sbjct: 197 FVGINPKEYTRIVRFQKALAQMQHQAGKEINQAQIAYTSGYADQSHFIREFKKFCGYTPM 256 Query: 281 AVLK 284 ++LK Sbjct: 257 SLLK 260 >UniRef50_UPI0001789679 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789679 Length = 289 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 55/101 (54%) Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241 R IE+ + + +L+Q SV+ +A T S+ + RLF G + +Y L RL+ A Sbjct: 3 HHRIIEQALIHIEENLEQPLSVSSVALTFNMSKYYFHRLFSAMMGCSLNQYILSRRLNAA 62 Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282 LSL+ S+ ++A L F F++AFK +G APS++ Sbjct: 63 LSLIHNNNLSLTDIAYQLAFGTQASFTRAFKQHYGVAPSSL 103 >UniRef50_UPI0001788616 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788616 Length = 297 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 17/242 (7%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYW 111 +++P + +++ +Y +G G L G+ +L + + P H Y E W YW Sbjct: 51 RERPEGSGAYILIYCAEGEGWYRLNGGKTYSLLKGQAVVIPPDTPHEYASSEFHPWSIYW 110 Query: 112 --MEFTPTSMM-----------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158 M+ T ++ +PV Q I E++ + + + T I + Sbjct: 111 WHMKGTHAGLLFEGFTGAAEPAIVPVDQSRSIV--ELFQESYELLQKGYTLNHIIHVSQL 168 Query: 159 VAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218 L II + L G+ + +E+ + + L+ S+ ++AA S Sbjct: 169 AGHLAAII-RLARLQPQRGQHQHNKHDMEQTLRFMTEHLEGHVSLKELAAYANLSIPHFT 227 Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278 F TG +P +YYL ++ A L G SV E++ L F D ++FS+ FK G + Sbjct: 228 FRFKEATGYSPIDYYLRLKIQRACQHLDLTGESVKEISHRLGFQDPYYFSRLFKKIMGKS 287 Query: 279 PS 280 PS Sbjct: 288 PS 289 >UniRef50_A7LRR5 Sensor protein n=2 Tax=Bacteroides RepID=A7LRR5_BACOV Length = 1333 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Query: 179 KDPQRRQIEKLIATLHASLQQ-RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 + P + +E++I ++ +L SV +A I S L R T +T + + R Sbjct: 1219 QSPDEKLMERIIKVVNDNLSNTEISVKQIADEIGISTVHLNRKLKELTNQTSSRFIRNIR 1278 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292 L A LL ++ +S+ EV+D F D +FSK+FK +G P+A +K + TD Sbjct: 1279 LQAAARLLAEKKHSIAEVSDLTGFSDPNYFSKSFKELYGMYPTAYMKENNPTETD 1333 >UniRef50_C6D094 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D094_PAESJ Length = 289 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 51/94 (54%) Query: 187 EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLK 246 EK+ TL +S ++ + +A T S ++LR++FL++TG PK+Y R A L Sbjct: 177 EKIKQTLESSYKENLRIEQLAKTYSISPSYLRKVFLKHTGMGPKQYLDHIRNRQACDYLV 236 Query: 247 QQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 + +VA +++ +HFSK FK G +PS Sbjct: 237 FTDYPINQVAKLCGYYEEYHFSKMFKQHNGMSPS 270 >UniRef50_A8TQD3 Transcriptional regulator, AraC family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQD3_9PROT Length = 325 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 52/106 (49%) Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241 Q +QI + +HA ++ W+V +AA++ S + F G P Y D RL A Sbjct: 201 QDQQIGGALQLIHAEPERSWTVESLAASVGMSRSRFAERFSDLMGAGPMSYLTDWRLQKA 260 Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 LSLL SV +VA + F++AF KFG AP+ ++ D Sbjct: 261 LSLLDDARCSVQQVASRTGYQSPAAFTRAFTGKFGLAPTEYRRSPD 306 >UniRef50_Q1R055 Transcriptional regulator, AraC family with amidase-like domain n=2 Tax=Chromohalobacter salexigens RepID=Q1R055_CHRSD Length = 341 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 51/97 (52%) Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 R + + +A + A L Q + ++ S+ L RLF+ + G+TPK+ YL RLD A Sbjct: 237 RSVVRALAVMEAHLDQVLPMPEICRLAGQSQRQLTRLFVAHFGETPKQCYLGMRLDYARR 296 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 LL V E A + F HFS+A++ +FG PS Sbjct: 297 LLADSRCRVTEAALSSGFVHLAHFSRAYQARFGERPS 333 >UniRef50_B4D0H6 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0H6_9BACT Length = 282 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 13/219 (5%) Query: 67 TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVG 125 V+G G+ILL +G L + P ++++H G W W+ + VG Sbjct: 66 AVEGEGRILL-DGRWQRLRAGELSMAPPRGLNAFHAVPGRRWVIAWVRCEEPPWIRPLVG 124 Query: 126 QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK--DPQR 183 S + E++ +I ++N A ++++ WI L++ ++ P R Sbjct: 125 AGSPVR----LRAGKGEMSRVIG---GLRNEWEGARDPRMVHHWIGLLHGLLQRFAQPWR 177 Query: 184 RQ--IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241 Q + +L + + W+++ +AA + S LRRL LR G+TP + R+ A Sbjct: 178 GQERLWRLWEEVGREPAKPWTLSMLAARVHMSSEHLRRLCLRELGRTPVQQLTYLRIQRA 237 Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 LL+ + + +A + + + FS+AFK G PS Sbjct: 238 KDLLENSDDKLEAIAPAVGYVSALVFSRAFKRWVGCTPS 276 >UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HZP2_LYSSC Length = 276 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 13/216 (6%) Query: 78 NGEQITLHGNCIIFLKP-MDIHSYHCEGLVWE----QYWMEFTPTSMMDIPVGQQSVIYN 132 NG + I+ P M I VWE Y + T++ + V Q +I Sbjct: 56 NGTPYVMEPGVIVHAGPQMPIEVNVTSQKVWEYAVVHYNLPMEETALYPL-VEQHFLIKT 114 Query: 133 GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI---CLMYADGKK-DPQRRQIEK 188 G Q +T+V +L+ S + N+AV F +K ++ + L+ A K D +E+ Sbjct: 115 GH-NTQIITQVQQLVES-YSFPGNMAV-FKSKTLFMNLLEHILIAAKVKVLDNANELMEQ 171 Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 + +H ++ SV+++++ LF ++TG P +Y + R+ A LL+ Sbjct: 172 ALQYIHEHYAEQISVSNISSEFDIERRRFAYLFEQHTGMNPSKYITEYRIRRAKDLLEYG 231 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 G V E+A+ + + D F+FS+ FK G +PSA K Sbjct: 232 GIPVAEIAECVGYVDCFYFSRVFKKCTGLSPSAYRK 267 >UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VUW2_DYAFD Length = 300 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 14/240 (5%) Query: 51 RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD--IHSYHCEGLVWE 108 R+++K N + +Y +QG G ++ + ++ + N I L D I + W Sbjct: 53 RERRKGCEDN--ILIYCIQGKGHYVIGD-KKFEVSANQFILLPATDQYIRYWADHDDPWT 109 Query: 109 QYWMEFTPTSMMDIPVGQQSVIYNGEI---YNQELTEVAELITSPEAIKNNLAVAFLTKI 165 YW+ FT + + Q G + +N++ ++ I + +L + Sbjct: 110 IYWVHFTGAGIDNFNQSLQIAPQKGPVDILFNEKTLDIWHRIYQSLEMGYSLENLANATM 169 Query: 166 IYQWICLMYADGKKDPQRRQIEKL------IATLHASLQQRWSVADMAATIPCSEAWLRR 219 + M+ +K EK I + +L Q+ SV DMA S + Sbjct: 170 CLHYFTAMFLFPEKHLTTEGTEKTDLITETITHMRLNLDQKLSVEDMARQHQLSCSHFSM 229 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 LF + TG P +Y++ ++ A L+ + E+A +L + D F+FS+ FK G +P Sbjct: 230 LFRKGTGMAPVDYFIHLKMQKACQLIYANEGKIKEIAMSLGYDDPFYFSRVFKKNMGQSP 289 >UniRef50_B9NXI5 Transcriptional regulator, AraC family n=2 Tax=Rhodobacteraceae RepID=B9NXI5_9RHOB Length = 325 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 46/78 (58%) Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263 + +AA + S L RLF +Y TPK+YY++ RLD A LL Q +S+ ++A + Sbjct: 242 SSIAARLGISTRQLERLFGKYLNSTPKKYYVEMRLDRARKLLLQTEDSITDIAMACGYES 301 Query: 264 SFHFSKAFKHKFGYAPSA 281 HF+K ++ +FG +P A Sbjct: 302 PGHFAKVYRARFGVSPHA 319 >UniRef50_UPI0001C43064 probable transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C43064 Length = 253 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%) Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN-SVGEVADTLN 260 +V+++A + A R F R+TG +PKE+ R+ A L++++ + ++ EVAD Sbjct: 167 TVSELAKKANMTPASFSRAFKRHTGSSPKEFINSCRIKKAKELMREKKDITLKEVADLAG 226 Query: 261 FFDSFHFSKAFKHKFGYAPS 280 F D F+FSK FK K G APS Sbjct: 227 FQDEFYFSKLFKKKEGVAPS 246 >UniRef50_D0YX71 Transcriptional regulator AraC family protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YX71_LISDA Length = 321 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 25/176 (14%) Query: 132 NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-----------MYADGKKD 180 N +++ Q L VA+ L FLT+ ++ +I L +Y + Sbjct: 147 NFQLFQQSLPAVAD---------TRLEKTFLTQSLF-FILLALNEAGIDVFNVYRFNYDE 196 Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 P+ R I +LI Q++WSV DMA + +++ LRR L G + + LD R+ L Sbjct: 197 PKERTIARLIT---QDPQRKWSVDDMAKALFTTQSTLRR-HLAKEGVSFSQLLLDVRMGL 252 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPH 296 AL+ L S+ ++ F + +F AFK K+G PS + +H ++ H Sbjct: 253 ALNYLTFSNYSISQIGHRSGFGSAAYFCDAFKRKYGITPSQFRATSREHNDMSALH 308 >UniRef50_Q2RUD8 Transcriptional regulator, AraC family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RUD8_RHORT Length = 320 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 51/97 (52%) Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 R + +++ L A L S+ D+A S A L R F R GKT + D RL+ A Sbjct: 215 RPLARVLDRLMADLGNPPSLEDLARDAGMSHARLNRCFHRAYGKTVFAWLRDHRLERACR 274 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 L+Q G+S+ E+A F S HF+ AF+ +FG P+ Sbjct: 275 YLRQDGHSITEIAFLCGFSSSSHFAAAFRQRFGCRPA 311 >UniRef50_B8DGU9 Transcriptional regulator, AraC family n=2 Tax=Firmicutes RepID=B8DGU9_LISMH Length = 142 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 60/103 (58%), Gaps = 2/103 (1%) Query: 180 DPQRRQI--EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 D Q++QI ++I + + S++ ++ T+ S A++ ++F TG++P Y + R Sbjct: 33 DEQQKQILVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIR 92 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 L A LLK + +V + A+ + + D+++FSK FK +G+ PS Sbjct: 93 LTRAEELLKNKDVTVKQAANMVGYNDAYYFSKLFKKYYGFPPS 135 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 18/246 (7%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQIT----LHGNCIIFLKPMDIHSYHCE-G 104 P P N ++ Y + G G ++ + + +T + + P +++Y + Sbjct: 29 PLHSYGPYARNHYLFHYVISGAGTLMSTDSKGMTNTYHIKSGEGFLIHPKQVNTYSADRD 88 Query: 105 LVWEQYWMEFTPTSM----------MDIPVGQQSVI-YNGEIYNQELTEVAELITSPEAI 153 WE W+EF + MD PV + + E+ N+ L SP + Sbjct: 89 HPWEYTWLEFDGLRVKEALELAGLTMDNPVYHSNARDLSLELKNEMLYIANHSDQSPFHL 148 Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 +L + FL + G K Q I + + + + Q SV D+AA + Sbjct: 149 IGHLYL-FLDYLTRSSSSRRMMRGGK-LQDFYIREATSFIEQNFQNDISVEDIAAFCNLN 206 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 ++ ++F GK+P+E+ + R+ A LLK ++ ++ + + + HFS+AFK Sbjct: 207 RSYFGKIFRDAVGKSPQEFLISYRMTKAAELLKLTELTIKDIGNAVGYPSQLHFSRAFKK 266 Query: 274 KFGYAP 279 +G +P Sbjct: 267 TYGISP 272 >UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KAQ8_BACHD Length = 287 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/267 (23%), Positives = 115/267 (43%), Gaps = 23/267 (8%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104 Y +P K P + + ++ ++G G G+ +L F+ P ++ +Y + Sbjct: 25 YSQTFPYHKVGPQVHDYFLLHVVLRGKGSFHCA-GKTYSLSAGDSFFIYPKELVTYESDR 83 Query: 105 L-VWEQYWMEFT--------------PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITS 149 W W+ F P S + G+ S+I +++ + + EL + Sbjct: 84 TDPWYYTWVAFQGPFFEETLRSAGIQPESPIVSLGGKGSMI--KQLFYDLYSSMTELKVA 141 Query: 150 PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ-IEKLIATLHASLQQRWSVADMAA 208 N +++ I Q L K+D Q Q I+ +I L + S+ +AA Sbjct: 142 SSLKTNAYLRLIISEFIEQTTILDEHSQKEDHQLDQHIQDVIRLLSLRYFEPLSIETIAA 201 Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268 + + + + F YTG +P +Y L+ R+ A +LL Q+ ++ EVA ++ + D +FS Sbjct: 202 SYGYNRTYFSKKFKEYTGYSPSKYLLNIRMKKAEALL-QKSLTIQEVASSVGYRDPLYFS 260 Query: 269 KAFKHKFGYAPSAVLKNTDQHPTDASP 295 K FK G APS + QH ++ P Sbjct: 261 KQFKQWSGVAPSVFRQ---QHLKESEP 284 >UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae RepID=C6BAA0_RHILS Length = 288 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%) Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 AD + R +++ L Q SV +A + S + RRLF TG + K+Y + Sbjct: 175 ADLNTNAVNRLVDRARMVLMERCGQPLSVEQLADELGVSYPYFRRLFREQTGMSAKQYQM 234 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 RL A+ LL S+ E+A L F +FHFS F+ G +P+ Sbjct: 235 RVRLQRAIDLLVNTDKSIKEIAGLLGFHSAFHFSTQFRQLIGSSPT 280 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 60/103 (58%), Gaps = 2/103 (1%) Query: 180 DPQRRQ--IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 D Q++Q + ++I + + S++ ++ T+ S A++ ++F TG++P Y + R Sbjct: 168 DEQQKQLLVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIR 227 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 L A LLK + +V + A+ + + D+++FSK FK +G+ PS Sbjct: 228 LSRAEELLKNKNITVKQAANMVGYNDAYYFSKLFKKYYGFPPS 270 >UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE Length = 288 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/245 (22%), Positives = 108/245 (44%), Gaps = 30/245 (12%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114 P + +++V + V G GK + +G L + L + Y +G W W+ F Sbjct: 46 PTVRDNYVLHFIVDGKGKFTI-DGITTQLKTGDMFILPKGKVAFYQADGEHPWTYLWVGF 104 Query: 115 TPTSMMDIPVGQQ-----------------SVIYNGEIYNQELTEVAELITSPEAIKNNL 157 + + +I Q ++ + +Q+L +V EL + E K Sbjct: 105 SGSKAENILSKTQLLDHYFCHSTLESKVLDQIVKLTQFRDQKLDDVTELQLTAELYK--- 161 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 +AFL K ++ +D Q +Q++K+I H ++++A + + + Sbjct: 162 LLAFLMK---EFPSKAMSDSSILIQNYIKQVKKII---HTQYGNPLKISEIAKKLNLNRS 215 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 +L ++F T + K+Y + R++ + LL + + E+A+ + F D+ FSKAFK F Sbjct: 216 YLYKIFKEETDYSLKDYLIQIRMEKSADLLTRTTFHISEIANAVGFPDALAFSKAFKKHF 275 Query: 276 GYAPS 280 G +PS Sbjct: 276 GQSPS 280 >UniRef50_C9A3L0 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A3L0_ENTGA Length = 234 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 + K I +H +L Q + D+A + +E + LF + G P +Y ++ +A SL Sbjct: 131 HVVKAIQYIHTNLYQPLRIKDIADQLGINERYFSTLFSKEVGMPPSKYVQKQKIKIAKSL 190 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 L Q S+ ++++ L+F D+ HF K FK+ G +PS +NT Sbjct: 191 LASQDLSITDISNLLHFSDTPHFCKVFKYLTGVSPSK-FRNT 231 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 43/293 (14%) Query: 12 NETPYNIP----LLINENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVAVY 66 NE IP L I EN ++ + + ++ A+ HYR R + P + +Y Sbjct: 10 NEKAIVIPQENLLRIKENPMTRLLHPTDVGYYPCAEGHYR---ERTEGSP----QHILIY 62 Query: 67 TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVG 125 +G G + G + T+ N ++ H Y W YW+ FT G Sbjct: 63 CHEGEGWYNIGKG-KCTVKKNDFFIIEAGTPHVYAASTSHPWSIYWIHFT---------G 112 Query: 126 QQSVIYNGEIYNQEL-------TEVAELITSPEAIKNNLAVAF-LTKIIYQWICLMYADG 177 +QS +++ E++N+ + + I I NL + + + + Y +CL Y G Sbjct: 113 EQSHLFS-ELFNRTIYIDDSPTARFNDRIQLFNEILVNLEMGYSIENLEYITLCLWYLLG 171 Query: 178 --KKDPQRRQI---------EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226 + PQ R+I +K+I + A+L ++ ++ DMA ++ S +L LF + +G Sbjct: 172 SFRYIPQFREINKPKTQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSG 231 Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +P Y+ ++ A LL E+A L F D ++FSK F +P Sbjct: 232 MSPINYFNQLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSP 284 >UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS family) protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692C08 Length = 288 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/246 (22%), Positives = 109/246 (44%), Gaps = 17/246 (6%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWE 108 P + P + + ++ + + G G I + G+++ L ++P ++ Y + + W Sbjct: 32 PGHQIGPRLCDYYLMHHVISGKG-IFMYRGKELELKAGDTFLIEPEELVRYEADQVNPWM 90 Query: 109 QYWMEF----TPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIK----NNLAVA 160 W+ F P ++ I + NQ ++E+ I S K + A+ Sbjct: 91 YRWVAFQGKGVPEALEKTGFSSSRCIVHTRD-NQNVSELFSTILSVLQDKKEGAHQKALG 149 Query: 161 FLTKIIYQWICLMYAD---GKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 +L + + +Y G + R ++K I L + S+ MA + + A Sbjct: 150 YLYVLFGELCEAIYPKTGIGMRTSSESGRTVQKAIHYLSTQYAEDISIETMADNLGYNRA 209 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN-SVGEVADTLNFFDSFHFSKAFKHK 274 +L R+F + TG TP + L R+D A LL+Q+ ++ ++A ++ F D +FSK FK Sbjct: 210 YLSRIFKQETGLTPVTFLLKLRIDKARFLLRQRMELTIEQIASSVGFHDPLYFSKQFKRF 269 Query: 275 FGYAPS 280 + AP+ Sbjct: 270 YKCAPT 275 >UniRef50_B6QZZ9 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZZ9_9RHOB Length = 289 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 24/248 (9%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEF 114 +P +++V +QGC + + GEQI ++F+ P ++H EG + Y M + Sbjct: 45 EPHTHDTFVVGGILQGC-QCYWQRGEQIFAGPGDLVFVNPFELHDGIPEGYGY-TYRMTY 102 Query: 115 TPTSMM--------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166 S++ D P +++ EL + E I + ++I+N + + Sbjct: 103 PSISLLQKIAEDLTDKPQSGTPYFPEACVHDPELCQ--EFIAAHKSIQNRSIDLEAEEPL 160 Query: 167 YQWICLMYAD---------GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 Y M A KDP + + L S + D+ S+ L Sbjct: 161 YMIFAKMLAKYGSFRESDMNSKDPV--AVRRAREYLEESFMGNVHLDDLVNISGRSKYHL 218 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 R F + TG+TP Y D R+ A LL +G S E A F D H ++ FK + G Sbjct: 219 IRSFKKATGQTPHAYLTDVRVRNARRLLV-RGTSPSETASLCGFADQAHLTRQFKSRVGT 277 Query: 278 APSAVLKN 285 P+A ++ Sbjct: 278 TPAAFQRS 285 >UniRef50_B9Y348 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y348_9FIRM Length = 297 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 61/110 (55%) Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 ++P R ++ ++ T+H Q+ ++A +AA+ ++ +LF+R+ +TP Y RL Sbjct: 184 ENPDLRCLKVMVGTIHLRFAQKLTLAQIAASGAVGQSKCCKLFMRFLNQTPMAYVNQYRL 243 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 +L LL+ SV E+A + F + ++++AF+ F +P+ K ++ Sbjct: 244 YQSLELLRNTAMSVTEIALAVGFGSASYYAEAFRKGFDQSPTQYRKEHNR 293 >UniRef50_Q1MGU4 Putative AraC family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1MGU4_RHIL3 Length = 314 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 50/104 (48%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +I + + +H +RW+V D+A S + F + P Y+ RL LAL L Sbjct: 209 RISRALKAIHDEPYRRWTVLDLARVAGLSRSGFAARFTALVKEAPLSYHSRWRLTLALGL 268 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 ++Q VG VA + + FS+AFK +FG+AP T Q Sbjct: 269 MRQPDAKVGSVARQVGYDSEAAFSRAFKAQFGFAPMNAKSTTIQ 312 >UniRef50_A4Z280 Putative transcriptional regulator, AraC family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z280_BRASO Length = 304 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 54/97 (55%) Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 R++ +L+ + L + SVAD+AA + S L LF R G +P + + R++ A + Sbjct: 200 RRLRQLVDYFDSRLGESLSVADLAAFLDLSVPHLTELFRRGLGSSPYRWMMQRRIERARA 259 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 LL ++ +S+ ++A L F S HF+ AF+ G PS Sbjct: 260 LLAERDHSITDIALALGFASSQHFATAFRKACGLTPS 296 >UniRef50_D1N1T4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1T4_9BACT Length = 302 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 46/85 (54%) Query: 201 WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLN 260 WS MA CS L RLF +Y TP++Y L+ R+ A LL + SV E++ + Sbjct: 213 WSQHRMAGRCGCSCTHLVRLFRKYFDTTPRQYLLELRMRRAKQLLADEKLSVKEISARVG 272 Query: 261 FFDSFHFSKAFKHKFGYAPSAVLKN 285 + ++ +FS F+ +FG +PS K Sbjct: 273 YDNALNFSTGFRKRFGISPSEYRKQ 297 >UniRef50_C6C8M9 Transcriptional regulator, AraC family n=44 Tax=Gammaproteobacteria RepID=C6C8M9_DICDC Length = 322 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 52/100 (52%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + ++ A + A L + ++ D+AA SE R+F + G P +Y + RL A LL Sbjct: 220 LRRVQARIDAGLAEGLTIGDLAAEAGLSEFHFARMFRQSVGMAPHQYVMKRRLAQAKDLL 279 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 +Q S+ +VA F + HFS+ F+ +FG PS + + Sbjct: 280 RQSRLSITDVALACGFSSASHFSQRFRAEFGVTPSTLRRQ 319 >UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0R7_9CLOT Length = 322 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/263 (21%), Positives = 118/263 (44%), Gaps = 27/263 (10%) Query: 46 RVIWPRD-----------KKKPLIANSWVAVYTVQGCGKILLKNGEQITLH-GNCIIFLK 93 R I+P D +++ A ++ +Y +G G I + E T H G F Sbjct: 61 RTIYPTDVGFFPRARAHYREREDGAQQYILIYCTEGKGCIEV---EDRTYHIGRSDAFCI 117 Query: 94 PMDI-HSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIY-NGEIYNQELTEVAELITSP 150 P H Y+ + W W F + P+ + V++ N + + + +L+ Sbjct: 118 PKGRRHKYYADPEDPWSILWAHFKGEVTLCYPLEECRVVHMNSRQSDNRMMVLFKLLFR- 176 Query: 151 EAIKNNLAVA---FLTKIIYQWICLMYADGKKDP---QRRQIEKLIATLHASLQQRWSVA 204 ++ N + ++++++ + +Y K D Q R + +I ++ +L++ ++ Sbjct: 177 -VLERNYTLGNFIYISQVLSLILSEIYFREKTDESTVQDRHVTMVIRFMYENLKRSLTLE 235 Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264 +++ + S ++L +F TG++P E+++ ++ A LLK + EV+ L + D Sbjct: 236 EISEEVKLSRSYLNTIFKTQTGRSPVEFFIHLKMQEACKLLKATDMYIYEVSSELGYEDQ 295 Query: 265 FHFSKAFKHKFGYAPSAVLKNTD 287 ++FS+ FK G +P KN D Sbjct: 296 YYFSRIFKKVVGVSPRD-YKNGD 317 >UniRef50_D1NAQ6 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAQ6_9BACT Length = 246 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 8/227 (3%) Query: 57 LIANSW-VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFT 115 L + W + V+ G G ++ NGE++ L L P CE V Q ++ F Sbjct: 18 LTGHHWRLYVHDAPGAGVVV--NGEKLELSPGFAWLLPPHGDLPAWCENPVLNQLYLHFE 75 Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 + S + + E+ E + S A A + + + Sbjct: 76 VARLTGSRRTPASAVPLDPVLTVLARELKEQLDSQAPALILTATALAAAALARLPGDAWD 135 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS-EAWLRRLFLRYTGKTPKEYYL 234 + D R+IE+L +L +L Q +V D+A + A++RR F TG TP +Y Sbjct: 136 ELGPD---REIEELCESLRHTLAQELTVTDLARRLGMPVNAFIRR-FQAGTGSTPYQYLT 191 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 + R A LL++ S+ ++ + + D FHFS+ FK G +P+A Sbjct: 192 NLRYTRAARLLEEGELSIDDICEAVGVKDRFHFSRMFKRLHGLSPAA 238 >UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter RepID=C9Y4M3_CROTZ Length = 289 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 21/244 (8%) Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGL----VWEQYWMEFTP 116 W V G G + NG+ TL G + F++ D H Y H E L V + F+ Sbjct: 47 WEIVIVEHGTGTHVF-NGQPYTLSGGSVCFVRDHDRHLYEHTENLCLTNVLYRSPQAFSF 105 Query: 117 TSMMDIPVGQQSVIY---NGEIYNQELTEVAELITSPEAIK---NNLAVAFLTKIIYQWI 170 S ++ + Q+ + + + Q L + + L+ EA++ + AVA + + Q + Sbjct: 106 LSGLEKLLPQEQDGHYPSHWRVSQQTLHQASPLVERLEALRECSDVHAVASMEMLFMQLL 165 Query: 171 CL------MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 L M G D ++ +LIA L + +A S L R + Sbjct: 166 ILLRSGSQMQGGGHAD---ERLNQLIAWLEDHYAEEVCWEQLADKHMLSLRTLHRQLKQR 222 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 TG TP+ Y RL A LL+ SV ++A F DS HFS F+ +F ++P + + Sbjct: 223 TGLTPQRYLNRLRLMKARYLLRHSEESVTDIAYQCGFGDSNHFSTLFRREFSWSPRDIRQ 282 Query: 285 NTDQ 288 D+ Sbjct: 283 GRDE 286 >UniRef50_A1WQ59 Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQ59_VEREI Length = 401 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 3/116 (2%) Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 P + + + A + A +++ +A++A + S L RLF RY P +YY++ RL Sbjct: 227 PGYQHLTEAAALMAARIEEPLPLAELARAVALSLRQLERLFHRYFSMNPAQYYMNLRLHR 286 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPH 296 A LL + ++ F S HF KA++ FG++PS + +H A PH Sbjct: 287 AQELLTHSSLRIMQITVACGFQSSSHFCKAYRSLFGHSPS---EERRRHIGGAKPH 339 >UniRef50_Q98JA7 Probable transcriptional regulator n=1 Tax=Mesorhizobium loti RepID=Q98JA7_RHILO Length = 326 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 53/97 (54%) Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 R +++ + + ++LQ+ SVA++A + CS L RLF G P YL R+ A S Sbjct: 215 RSVKRALLLMESNLQETLSVAEIATRLNCSRRQLERLFGTELGIGPMAAYLALRVHHAKS 274 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 LL+ +G++A F ++ HFS+ F+ + G P+ Sbjct: 275 LLEGSDLQIGDIAYRCGFTNAGHFSRVFRQQTGITPT 311 >UniRef50_D1N4A3 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4A3_9BACT Length = 273 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 22/229 (9%) Query: 65 VYTVQGCGKILLKNGEQITLH-GNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIP 123 Y ++G G+ + G +I G+ +I + + H +H G ++Y+ P Sbjct: 49 TYILRGTGQYITATGRKIPYGPGSLMIRMPGVLHHQFHDAGEYVDKYFA--IPAPFFQAL 106 Query: 124 VGQQSVIYNGEIYNQEL------------TEVAELITSPEAIKNNLAVAFLTKIIYQWIC 171 + Q+ + + + + L E+A A+ FLT+I+ Sbjct: 107 LEQKLLSPDRPVIDAGLHSWLVARFDGLADELAARGERELALSMGSCFGFLTEILLSVTV 166 Query: 172 LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 ++P +I + + L +L QR S A++AA + + RRLF + G +P E Sbjct: 167 -------REPHYAEIREGASLLEQNLGQRISPAEVAAKVGMTYPNFRRLFTLHLGISPAE 219 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 Y + R++ SLLK + E+A T + D + FS+ F G P Sbjct: 220 YRIRRRIEKIQSLLKSSELPLKEIAATFGYADIYTFSRQFSRYAGMPPG 268 >UniRef50_B5JKR9 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKR9_9BACT Length = 273 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 46/87 (52%) Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261 S+A++A S A+L RLF R++ +TPK Y +++ A L + V + A + + Sbjct: 182 SLAEVATACGVSAAYLSRLFARFSNETPKAYLDRMKMNYAAQKLLRGNLQVKQAAAEVGY 241 Query: 262 FDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 D FHFS+ FK FG PS K Q Sbjct: 242 ADVFHFSRVFKKCFGVPPSTFAKRAGQ 268 >UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXI4_DYAFD Length = 298 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 22/251 (8%) Query: 54 KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWM 112 ++P + + +Y G G I L G Q+ + +I L H+Y + W YWM Sbjct: 49 QRPNGISQAILLYCTDGQGWIEL-GGNQLHVRAGEVILLPTELPHAYGADTQNPWSIYWM 107 Query: 113 EFTP-------TSMMDIPVGQQSVIYNG--EIYNQELTEVAELI----TSPEAIKNNLAV 159 ++MD ++ G + N T +A + ++ ++ NLA+ Sbjct: 108 HIAGDHSDAAVAAVMDRDGEPARAVHVGFSDERNALFTHIASTLLKGYSASNLLQANLAL 167 Query: 160 A-FLTKIIY--QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216 +L+ I + + G P EK I + +L S+ ++A ++ S ++ Sbjct: 168 PHYLSSFIAPEHFGAQKPSAGAGSP----TEKAILYMQENLSNSLSLDNIARSVNLSVSF 223 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 R F + TG P EY+ R+ A LL + EVA + D F+FS+ FK + G Sbjct: 224 FSRRFKKDTGYAPIEYFNYLRIQKACQLLHFSTWRINEVASAIGIDDPFYFSRLFKQQMG 283 Query: 277 YAPSAVLKNTD 287 +P+ KN D Sbjct: 284 LSPAHYRKNKD 294 >UniRef50_C5RDR5 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=C5RDR5_CLOCL Length = 294 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 52/96 (54%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +IEK+IA +H + ++ ++A++A SE+ R F + T P EY ++ R++ A L Sbjct: 190 EIEKVIAYMHQNFGKKLTIANLALVANMSESHFIRTFKQETKLAPIEYLINLRINKAKKL 249 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 L+ + +V E+A F S HFS F + PS Sbjct: 250 LRSKSKTVTEIALQCGFNSSSHFSSCFTKQLDCTPS 285 >UniRef50_C0DSD5 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DSD5_EIKCO Length = 302 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 86/214 (40%), Gaps = 37/214 (17%) Query: 84 LHGNCIIFLKPMDIHSYHCEG----LVWEQY--------WMEFTPTSMMDIPVGQQSVIY 131 LHGN ++ +K C G L+ QY W+ ++ +P +Q+ Sbjct: 92 LHGNGVLAVK-------DCGGNRLQLLCGQYRYTRHAALWLGMPECLLLPLPEMRQTA-- 142 Query: 132 NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ-RRQIE--K 188 + L E L + N L+ L ++ + Y DP Q+E + Sbjct: 143 -----SMMLDEAERLRYGSGTVVNALSQVMLVAVLRR-----YRQQSSDPSFLSQLEDPR 192 Query: 189 LIATLHASL---QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 L L A L Q+ WS+A MA S A L RLF G++P + L RL A L Sbjct: 193 LSGLLQAVLLAPQEDWSIARMAEMAKLSRAQLMRLFKSVIGESPHRFVLSIRLQQAAVQL 252 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +++ +A F HF++AFK FG P Sbjct: 253 AASADTILRIALENGFVSESHFNRAFKQYFGQTP 286 >UniRef50_A8IE82 Transcriptional regulator n=3 Tax=Alphaproteobacteria RepID=A8IE82_AZOC5 Length = 413 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 51/100 (51%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 ++ + + + +L + SVA++A + S L RLF +TP+E YL RL + Sbjct: 295 RVSRALLLMEQNLAEPLSVAEIARRLAVSPRQLERLFAERLAETPQESYLALRLRHGRWM 354 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 L S ++A L F D HF +AFK +FG P+A K Sbjct: 355 LANTVFSAAQIAAELGFADGSHFGRAFKGRFGETPAAFRK 394 >UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488V5_COLP3 Length = 290 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 8/225 (3%) Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMD 121 + +Y G G L G+ ++ I +L HSY + L W YW+ F T D Sbjct: 60 ILIYCTAGSG-FLTMAGKTTEINSGDIFYLPAGSQHSYQASKELPWTLYWLHFDGTLAND 118 Query: 122 IPVGQQSVIYNGEIYNQ-ELTEVAELITSPEAIKNNLAV----AFLTKIIYQWICLMYAD 176 V I Q + V + I+ +NLA + + +I L+ Sbjct: 119 FCQHINIVERKFTIGVQPRVIRVFDGISHLRHSSHNLAEFIQGGHQVQALLSYIALLVQQ 178 Query: 177 GKKDP-QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 K E L A + + + + +A S+ + F + TG++P Y+++ Sbjct: 179 RKPSAINTFDTENLRAMMQEHIHSKLDLDSLAEAAKLSKYHFSKKFKQVTGESPISYFIN 238 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 ++ A LL SV VA L + D+++FS+ FK G AP+ Sbjct: 239 MKMQRACYLLDSTPRSVKHVASELGYHDTYYFSRLFKKNIGMAPA 283 >UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 Tax=Lactobacillus RepID=A8YXG2_LACH4 Length = 274 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 4/150 (2%) Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG---KKDPQRRQIEKLIATLHAS 196 L E+ E++ +++ NL +A LT + ++ + + +K P+ Q + I L + Sbjct: 125 LLELYEMLNKRKSLLTNLKIASLTSQFFYYLVKEFPNHPPVRKTPKNDQYQIAINYLQKN 184 Query: 197 LQQ-RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 ++ ++ + S ++L LF T +P++Y + R++ A L+ +++ E+ Sbjct: 185 YTDPNCNIVELCNRLGVSRSFLYSLFRENTNISPQKYLMQLRMEAAKKELQNTTSNLKEI 244 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 A + + D F FSKAFK G +P+ +N Sbjct: 245 AHKVGYGDEFTFSKAFKRYSGVSPNVFRRN 274 >UniRef50_D2PPT5 Transcriptional regulator, AraC family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PPT5_9ACTO Length = 296 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 49/100 (49%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + ++ LH + W++A +A S L R F G+ P Y + R+ LA LL Sbjct: 194 VGPVLQALHDAPAAPWTLASLAGVAGVSRTTLARRFTDLIGEPPLTYLTELRMTLATQLL 253 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + +V VA + + D+F FS AFK + G +PS L + Sbjct: 254 AEPDATVARVARRVGYADAFSFSAAFKRERGVSPSTYLTS 293 >UniRef50_B9TGZ7 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TGZ7_RICCO Length = 164 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 50/95 (52%) Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257 +R ++AD A + SE L R F + G TP Y + R+D A LLK+ +G+VA+ Sbjct: 64 HRRITLADAANHLMVSERTLIRHFNKKLGMTPHTYLQNVRIDAAKILLKETNLILGKVAE 123 Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292 +FD +F + F+ G +P+ K +H TD Sbjct: 124 RTGYFDVTYFKRVFRETVGVSPTVFRKTPRRHITD 158 >UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=Clostridium perfringens RepID=B1BNT9_CLOPE Length = 285 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 55/95 (57%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 I + + + + + SV D++ S+++ R+F ++ TP+E+ + ++ A +LL Sbjct: 180 IREALNFIEENYNRNISVEDVSNRCNLSKSYFTRIFKKHMNTTPQEFLIQYKMLQACNLL 239 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 K + S+ +VA+ L + + F+FS AFK KF +PS Sbjct: 240 KDKSLSISQVAELLGYSNQFNFSVAFKKKFNLSPS 274 >UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG84_SANKS Length = 297 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 11/236 (4%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT 117 A V + G G G ++ G+ ++ L + H Y + W +W Sbjct: 64 AEQHVVLVCTDGAGWCRTPAGTEVVGRGDAVLLLA-GEAHEYGADAEDPWTLWWFHVLGG 122 Query: 118 SMMD-IPVGQQSVIYNGEIYN-QELTEVAELITSP-EAIKNNLAVAFL--TKIIYQWICL 172 + + G Q+ G + + ++ VA L++ + + L T + + Sbjct: 123 DAAELVSAGHQA--SGGPVAHLRDAAPVASLVSQVIDGLDAGTRAGTLQATGAAFHALTQ 180 Query: 173 MYADGKKDP--QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 + A G++ P +E+ + L A+ +R VA +AA + S + L LF + G +P Sbjct: 181 VVATGRRSPGPSLSPVERALEHLRATSPRRTPVASLAAMVGLSTSRLGALFREHVGVSPN 240 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 Y R+ A LL +V VA F D +FS+ F G APSA T Sbjct: 241 AYQSQLRMARARELLDSTDLAVAAVASACGFDDPLYFSRQFARVHGVAPSAYRGRT 296 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 52/96 (54%) Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247 K+ +H++ ++ S +++ S + R+F + TGKT EY + RL ++ LLK Sbjct: 189 KVFEFVHSNFNKKISTLNLSNIAHVSPYYFCRIFKQITGKTTTEYINEVRLKKSIELLKN 248 Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 ++ EVA F D +FS+ FK K+G +P+ + Sbjct: 249 SNMNITEVAINCGFNDVNYFSRLFKKKYGVSPTKFI 284 >UniRef50_Q1YY61 Hypothetical transcriptional regulator, AraC/XylS family protein n=2 Tax=Photobacterium profundum RepID=Q1YY61_PHOPR Length = 264 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 + + +L A L Q+ S+ D+A S + L R F + TG TP + RL+ A++ Sbjct: 166 KDLRQLRDYFMAHLDQKISLNDLAILCDLSPSQLLRQFKKTTGITPYAWLARLRLEHAMA 225 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282 LL+ NS EVA + F+D HF+ FK FG APS + Sbjct: 226 LLRAGFNST-EVAYHVGFYDQAHFANTFKQTFGIAPSLI 263 >UniRef50_A3YAS0 Transcriptional regulator, AraC family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YAS0_9GAMM Length = 309 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 11/112 (9%) Query: 180 DPQRRQIE-----------KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 +PQRR ++ + + + ++++ +A++A I S+ L RLF R+ +T Sbjct: 195 EPQRRSLQLRLDSRNPNLLEAVQLMEQNIEEPLLIAELAEHIGISDRELERLFKRHLAQT 254 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 PK +Y RL+ A +L+Q +SV VA F HFS+ ++ +F PS Sbjct: 255 PKAFYRQLRLEKARWMLQQTKDSVTSVATACGFVSLSHFSRCYQAQFSKLPS 306 >UniRef50_C9P3F6 Signal transduction histidine kinase n=2 Tax=Vibrio RepID=C9P3F6_VIBME Length = 1106 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 3/97 (3%) Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 R++ ++A +A + ++ +D+A + SE L+R TGKT KEY + RL+ A S Sbjct: 1006 RKLNHIVAERYADAE--FTTSDIAKRMYLSERSLQRRMKYLTGKTFKEYLTEYRLEQACS 1063 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 LL G V +VA F D +FS+ FKH++G +PS Sbjct: 1064 LL-MSGEKVAQVAFLCGFNDPSYFSQRFKHQYGLSPS 1099 >UniRef50_B1M000 Transcriptional regulator, AraC family n=7 Tax=Methylobacterium RepID=B1M000_METRJ Length = 344 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 47/80 (58%) Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264 ++A ++ S+ L RLFL+Y G++P ++YL RL+ A L++Q + +A F + Sbjct: 243 ELADSVRLSKRQLERLFLKYLGRSPAKHYLRIRLEHARHLIRQTAMPLLSIAIECGFASA 302 Query: 265 FHFSKAFKHKFGYAPSAVLK 284 HFSKA+ FG PSA K Sbjct: 303 SHFSKAYVDHFGRPPSAERK 322 >UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH5_9FIRM Length = 302 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 10/164 (6%) Query: 120 MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI----KNNLAVAFLTKIIYQWICLMYA 175 MD+PV + + N + + L+ + + T ++I + N+ F ++ Q Sbjct: 137 MDLPVVR--AMSNHTLLRELLSRIYHIRTDTDSINFWAEKNILQQFFCEVALQ----NKK 190 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 G++D R++ K+I + + ++ + +T+ S +++ +LF YT +P Y Sbjct: 191 AGQEDMNTRRLNKIIHYIKKYYMEPITLDSLCSTVNLSPSYIIKLFNHYTSLSPMAYVNR 250 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 R++ A +L + SV ++A F DSF+FSK FK G P Sbjct: 251 VRIEAAREMLAETPLSVSDIAAQTGFKDSFYFSKKFKAVTGITP 294 >UniRef50_B5GM94 Helix-turn-helix domain-containing protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GM94_STRCL Length = 324 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 50/100 (50%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + + +H + ++ W++A +A S L + F R G+ P Y D R+ LA LL Sbjct: 188 VGPALRAMHDAPERPWTLAALATASGVSRTTLAQRFTRLVGRPPLTYLTDWRMALAADLL 247 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + ++ VA + + D+F FS AFK G +PSA N Sbjct: 248 TESTATLAAVARQVGYADAFGFSAAFKRVHGVSPSAYRDN 287 >UniRef50_A7JVV0 Possible AraC family transcriptional regulator n=2 Tax=Mannheimia haemolytica RepID=A7JVV0_PASHA Length = 298 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 7/135 (5%) Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGK-----KDPQRRQIEKLIATLHASLQQRWSVAD 205 +++ N+LAV LT I+ + L+ + + K Q + LI + + + W V D Sbjct: 159 KSVVNSLAVVILTMILREH--LVNHNNQLFGILKGWQDLHLRPLIKAILLNPEHEWQVDD 216 Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265 MAA I S A L RLF ++ +P + RL A LLK Q SV +A + F Sbjct: 217 MAAFIHLSRAQLVRLFNKHLCISPHAFVHKIRLQKAAMLLKSQAGSVLSIALSCGFQSES 276 Query: 266 HFSKAFKHKFGYAPS 280 HF AFK ++ PS Sbjct: 277 HFITAFKKQYCVTPS 291 >UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XH00_CALS8 Length = 275 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 28/233 (12%) Query: 68 VQGCGKILLKNGEQITLHGNCIIFLKP----------------MDIHSYHCEGLVWEQYW 111 +QG + + E+ N + L P ++I SY V + Sbjct: 43 LQGDKYVEINESEKFKYDSNSFVILPPYSRVKLEIEEKTKALVIEIDSYLINH-VLSKLK 101 Query: 112 MEFTPTSMMDIPVGQQSVIYNGEIYNQELTE----VAELITSPEAIKNNLAVAFLTKIIY 167 +EF P + ++ ++ + G+ Y+ +LT+ + + S + + L + + +Y Sbjct: 102 IEFEPYELGNV----NNIFFVGK-YSPDLTQTYKKIVDTFFSRKVNREFLLDLYTQEFVY 156 Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 A+ + + +I ++ ++ + +R ++D+A E R F ++TGK Sbjct: 157 DIFKYRGAEKIINDKNSEIYHILDYINNNYLRRLKISDIAKEFNMKEYEFTRYFKKFTGK 216 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 +PKEY D +L+ A LLK + V +V + + + HF K FK+KFG P+ Sbjct: 217 SPKEYIKDLKLNKAKELLKFEN--VTDVCYDIGYENISHFIKEFKNKFGVTPN 267 >UniRef50_B6AWE3 Transcriptional regulator, AraC family n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AWE3_9RHOB Length = 335 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 48/94 (51%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + + IAT+ +++ S + +A S L RLF RY G +PK +Y+ RL A LL Sbjct: 233 VSRAIATMENTIEYPVSPSVLAKDFGISTRQLERLFQRYIGTSPKRHYMRLRLREAYRLL 292 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 Q + EVA F HFSK FK ++ +P Sbjct: 293 IQSQLGIAEVALACGFTSPSHFSKCFKTEYSISP 326 >UniRef50_Q989Y4 Transcriptional regulator n=2 Tax=Rhizobiales RepID=Q989Y4_RHILO Length = 356 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 50/92 (54%) Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247 K+I + +L + ++ DMAA+ S + R+F + G++P YYL+ RL+ A L+ Sbjct: 225 KIIEQMERNLDEPVALEDMAASNCLSRRQVERIFSKQIGRSPARYYLEMRLERAHLLIVN 284 Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 V E+A F + HFSKA++ +G P Sbjct: 285 SQLPVVEIAMACGFISASHFSKAYRENYGMTP 316 >UniRef50_C8SL33 Transcriptional regulator, AraC family n=2 Tax=Mesorhizobium RepID=C8SL33_9RHIZ Length = 359 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 18/215 (8%) Query: 77 KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY--WMEFTPTSMMDIPVGQQSVIYNGE 134 + I + G ++ + C + WEQ+ ++E P+ + Q + +GE Sbjct: 103 RRARLIGIGGGTLVLARAGLAEGRRC-AVHWEQFPLFLEKFPSVIAT----QAAFEEDGE 157 Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI-CLMYADGKKD---PQRR------ 184 +Y A T + + + A + +I + I C + + G + P R Sbjct: 158 LYTCS-GAGASFDTFLDLVGRDHGAAVVNRICEKAIACRVRSVGDRQRLPPNSRVRCNHK 216 Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 + +I + A + SV + A + + RLF R G+ P YYL+ RL+ A L Sbjct: 217 AVITVIDQMEAHIGDPKSVNGLVAATGLTRRQIERLFRRELGRGPSRYYLELRLERAHLL 276 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 L+ V E+A F + HFSK ++ +G AP Sbjct: 277 LRSSNLPVIEIAVACGFVSASHFSKVYREMYGCAP 311 >UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bacteroides plebeius DSM 17135 RepID=B5CYP4_9BACE Length = 297 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 8/232 (3%) Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPTSMM 120 +V +Y +G G E + + +I + P HSY + W++YW+ F + Sbjct: 63 FVQLYIAKGKGIFFSSPNESMEIKEGDLILIPPYTWHSYLPHKSTGWKEYWIGFDCPHIE 122 Query: 121 DIP----VGQQSVIYNGEIYNQ--ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY 174 + + IY I ++ L E A I + E +A + +I+ I Sbjct: 123 NCLKHNLFNKNKKIYRIGIQDKIINLYEEAIRIANEEKSGYQQYLAGIANLIFCMIPYYN 182 Query: 175 ADGKKDPQRRQI-EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233 + DP I K + L S AA I S +W R++F YTG TP +Y Sbjct: 183 NNRSFDPATEDIINKAKIIMKEELLNGISPEKTAAQIKLSYSWFRKIFKDYTGVTPSQYI 242 Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + ++ A L + E+A L + D +F K FK G PS K+ Sbjct: 243 QELKMQEAKICLTTSHIQIKEIAYHLGYEDIAYFIKLFKRHTGKRPSEYRKS 294 >UniRef50_C1D8X9 Putative uncharacterized protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D8X9_LARHH Length = 338 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 3/112 (2%) Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 Q I L G P+ + + ++ + A++++ S D+A + S L RLF +Y Sbjct: 214 QRIPLATRIGGSQPK---LTEAVSLMEANIEEPLSTDDIAFYVGVSRRQLERLFKQYLNT 270 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 P YYL+ RL+ A LL+Q S+ ++ + F HFS +++ FG P Sbjct: 271 VPSRYYLELRLNRARQLLQQTSKSIVQIGLSCGFSSGPHFSSTYRNHFGITP 322 >UniRef50_D1XPD5 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp. ACTE RepID=D1XPD5_9ACTO Length = 327 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 4/113 (3%) Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 +KDP + +L LHA W+VA +A S + L + F G+ P Y R Sbjct: 218 QKDPVAGETLRL---LHAEPAAPWTVAALARRTGVSRSTLAKRFTELLGEPPLTYLTHWR 274 Query: 238 LDLALSLLKQQGN-SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 + LA LL +Q + +V VA T+ + D F FS AFK G P A T+ H Sbjct: 275 MTLAADLLTEQPSATVASVARTVGYTDPFAFSVAFKRVRGTTPRAHRHTTEAH 327 >UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NB33_LEPBD Length = 283 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 10/239 (4%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWE 108 P K P + ++ Y G G G+ L F++P +I Y E W Sbjct: 27 PLHKYGPTTRSGYMLHYIKSGKG-TFYSRGKTFHLKAGEFFFIEPEEIIWYEADEYEPWA 85 Query: 109 QYWMEFTPTSMMD----IPVGQQSVIYN----GEIYNQELTEVAELITSPEAIKNNLAVA 160 YW+ F + + V + I++ G+I ++ E+ E+ E L Sbjct: 86 YYWIGFRGNMVSEYLRRTSVNKNKPIFSAQKGGDIIRDKIVEIFEISVISEDNDLLLNAR 145 Query: 161 FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 L + Y C KKD + + K + + + ++++A + +L R+ Sbjct: 146 LLEILYYLSECFPLTYAKKDSKNTILAKALQIMRNNFDTSVHISEIAKALYIDRTYLHRI 205 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 F PK+Y + R+ A LL Q V +A ++ D+ +FSK FK+K +P Sbjct: 206 FKEKMKIAPKDYLTNLRIAKAKELLTQTDYPVNIIAQSVGIEDAQNFSKLFKNKENISP 264 >UniRef50_Q2CGN3 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGN3_9RHOB Length = 292 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 48/95 (50%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 ++K++ +H + + +A T+ C+ L +F R G +P +Y R+ A L Sbjct: 186 VQKVLDMIHGETETWPQIGALAETVGCTRGHLHAIFRRDIGMSPSDYVQRHRIRQACECL 245 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 + ++V +VA TL F S HF++ F+ G PS Sbjct: 246 RSGSDTVTDVAHTLGFASSQHFARTFRKYLGLTPS 280 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 22/251 (8%) Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWMEFTPTSMMDI- 122 VY G + L G+ I ++ + +L P++ + +++ ++ + S++DI Sbjct: 60 VYQTSGL-TVTLHEGDGIFINSGVLHYLHPLEPCREARLQTQFFDKSFLAGSLGSLLDIK 118 Query: 123 ---PVGQQSVIYNGEIYNQE---------LTEVAELITSPEAIKNNLAVAFLTKI---IY 167 PV Q + +Y + L + EL + E +++ IY Sbjct: 119 YVAPVLDQRQLEAVPLYRSDPESKGFLECLQKGVELCSRKEEFFELRLRNLFSELWESIY 178 Query: 168 QWICLMYADG---KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 +W + ++ + +I++++ + A ++ SV+ +AA+IP SE RLF Sbjct: 179 RWAAQKESSTPSLRRSIEDDRIKQMMRYVQAHFSEKISVSSIAASIPISERECYRLFQNS 238 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 G TP EY + RL A SLL S+ ++A F S +F K F+ P A + Sbjct: 239 MGITPIEYLISVRLQNAQSLLMNTNKSILDIALETGFGSSSYFGKIFRSHHRLTP-AQYR 297 Query: 285 NTDQHPTDASP 295 N + A+P Sbjct: 298 NLSRQKALAAP 308 >UniRef50_Q89ME0 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89ME0_BRAJA Length = 300 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 3/98 (3%) Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241 Q R++E+L L ASL R ++A++A T A + F R TG TP+ + R+D+A Sbjct: 199 QLRRVEEL---LDASLDGRITIAEIAKTCHMPTASFSKSFARSTGVTPRRWLSMRRVDVA 255 Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 LL+ + S+ E A F D HF++ F G P Sbjct: 256 RKLLRDKAISLSEAALACGFSDQSHFNRVFLQLVGCTP 293 >UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYQ6_BACS4 Length = 294 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 44/309 (14%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 S ++ NET I +E VI + + + + Y H W D K N+++ Sbjct: 3 HSLNLPNET---IGFRTHEKVIGTLVDIHVVGKQYVHSH-DYYW--DGMKRNDKNTFIFQ 56 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKP------MDIHSYHCEGLV-----------WE 108 YT+ G G + ++ G + P + HS+H E + W Sbjct: 57 YTLSGEGAVFIEGKTHKVQQGQGFMLEVPGEHIYYLPSHSHHWEFIFLTLRGQAAADCWR 116 Query: 109 QYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA-FLTKIIY 167 + P +++IP+ + ++I +++ V EL A K NL F + Y Sbjct: 117 YVNRKVGP--IINIPI-ESALI-------EQVVNVYEL-----AFKKNLIDHYFASSKAY 161 Query: 168 QWICLMYADGKKDPQRRQ----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 Q++ Y K + Q I + I ++ + + +SV D+A I S+ + +LF Sbjct: 162 QFVMECYRYFKSFKAKEQMPDTITQAINFINKNYKASFSVQDVATNINLSKYYFIKLFKE 221 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 TP +Y RL+ A++LL +V E+A + + D +F+KAF+ G +P Sbjct: 222 SMNMTPGQYITKVRLEQAINLLSHTELTVKEIAMQVGYGDDNYFNKAFRKVVGTSPGE-F 280 Query: 284 KNTDQHPTD 292 + + P D Sbjct: 281 RRSKHLPFD 289 >UniRef50_A3YG62 Transcriptional regulator, AraC family protein n=2 Tax=Marinomonas sp. MED121 RepID=A3YG62_9GAMM Length = 337 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 52/99 (52%) Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 P ++ ++++ + A+L++ S+ ++A+ + S L R F ++ TP YYL RL Sbjct: 216 PSHSKLMEVVSLMEANLEEPISLDELASFVSMSRRQLERQFQKHLNCTPSRYYLKLRLVR 275 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 A LL Q S+ ++ F + HFSK ++ FG P Sbjct: 276 ARKLLTQTSMSITDIGIACGFVSTPHFSKCYREYFGIPP 314 >UniRef50_Q7MDX7 AraC-type DNA-binding domain-containing protein n=11 Tax=Vibrionales RepID=Q7MDX7_VIBVY Length = 316 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 23/146 (15%) Query: 163 TKIIYQWICLMYAD-GKKDPQRR----------------------QIEKLIATLHASLQQ 199 T++I+ +CL+Y + G + RR +++ L + + L Sbjct: 169 TELIWSLMCLLYGEIGGRPSYRRMLVSEAARMLLVIEPTISTSLSRVQTLFNEVESQLHL 228 Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259 WSVADMA+ SE RL + G +P+ + R++ A LL+ + ++ ++ L Sbjct: 229 PWSVADMASRCFISEEQFNRLTKQLFGVSPRTRLIQLRMEKAADLLRYKEWTITMISHRL 288 Query: 260 NFFDSFHFSKAFKHKFGYAPSAVLKN 285 + D ++F+ FK FG +P+ KN Sbjct: 289 GYKDPYNFTHRFKKYFGISPTHFRKN 314 >UniRef50_D1N130 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N130_9BACT Length = 284 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 13/226 (5%) Query: 72 GKILLKNGEQIT-LHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFT---PTSMMDIPVGQ- 126 G+ ++NG Q T L + L P + + G W+ YW F P +I G Sbjct: 50 GRCTVRNGRQSTVLLPGSVYLLAPAESRVFERFG-SWDAYWALFPLRLPLLWPEINPGIF 108 Query: 127 --QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR 184 Q I + L E L T LA + ++ + L G RR Sbjct: 109 RIQPPRREHRIMLRNLIETVNLTTECRGEWYQLAGNLIDNVVLRGNRLA---GNAPSDRR 165 Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 + L L + + ++ ++AA S + F R G +P+++ ARL +A L Sbjct: 166 ML--LAVKLLSRPENDLAMDEIAAKCGMSHSTFFSEFKRVHGLSPRQFREQARLQMAKIL 223 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHP 290 LK + S+GE+A N D + SK F+ FG P ++ + P Sbjct: 224 LKSEKLSIGEIAARTNLIDGSYLSKRFRKVFGVTPREYVRKFRESP 269 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 51/97 (52%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 ++ K+I ++ + W V D AA S A R+F TG+TP Y L R+ +++L Sbjct: 208 RVAKVIGSIEDEFTKPWKVEDFAAMAHMSRANFMRVFRTATGETPINYLLQLRIQKSMTL 267 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 L S+ E+A + F DS ++++ FK G +P A Sbjct: 268 LTSTKLSISEIAFEVGFNDSNYYTRQFKASQGISPLA 304 >UniRef50_C6CVN2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVN2_PAESJ Length = 259 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 24/246 (9%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI------TLHGNCIIFLKPMDIHSYHCE 103 P ++A+ A+Y V G KI+L+ G+ + + +G C+ P H Sbjct: 22 PEGASTLVLASYGKALYWV-GNEKIILEKGDLLYIPACQSYYGKCV----PTVFH----- 71 Query: 104 GLVWEQYWMEFT----PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159 E+Y +EFT P ++ +S E+ + + + T + L + Sbjct: 72 ----EKYVIEFTADTPPLPLLQNNHWVKSRTGAYELILERIKTMHNEWTEKHLYADVLGL 127 Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 A L + + W + +Q+E++ + + QQ+ + ++ I S + Sbjct: 128 AILYECLALWNRELDEGPATSAAHQQVERMKSYIMNYYQQKVTKEELGEYIRKSPNYAAT 187 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 LF R TG+T EY AR+ A+ LL +VGE+++++ + D +F + FK + G P Sbjct: 188 LFRRVTGQTISEYVHKARVKKAIYLLVDSTLTVGEISESVGYRDLSYFQRIFKRETGKTP 247 Query: 280 SAVLKN 285 +A +K+ Sbjct: 248 TAYMKD 253 >UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AG99_BACPU Length = 302 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 1/142 (0%) Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ 199 LT + + + +P + +I+YQ + + + P R IE+ +A + Sbjct: 158 LTMLHQNVHAPGGMGKLRVKELFLRILYQML-MGCKQKESSPNERIIEEAVAYIRGQYMN 216 Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259 ++ D+A + F +YTG P +Y + R++ A +LK + +V+ T+ Sbjct: 217 PLTLQDLAELCDMNPKSFSYFFHKYTGLHPIDYVIQYRMERAREILKAGNIPIRDVSMTV 276 Query: 260 NFFDSFHFSKAFKHKFGYAPSA 281 + + +FS+ FK KFG PSA Sbjct: 277 GYPNPLYFSRLFKKKFGVPPSA 298 >UniRef50_A9D0S3 Transcription regulator n=3 Tax=Phyllobacteriaceae RepID=A9D0S3_9RHIZ Length = 334 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 3/111 (2%) Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229 + ++ D + DP+ + + + + + S+A +A + S L +LF R G+TP Sbjct: 213 VNVIVGDSRDDPR---LVRAVRIMETHIDAPLSIAAIARRVSMSARGLEQLFSRQMGETP 269 Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 Y+L RL A L+ SV ++A F FS+AF+ +FG +PS Sbjct: 270 GAYFLSLRLGAARRLVNDTPLSVTDIASRTGFSSQPAFSRAFRRQFGLSPS 320 >UniRef50_Q01Y24 Transcriptional regulator, AraC family n=2 Tax=Acidobacteria RepID=Q01Y24_SOLUE Length = 335 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%) Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLH 194 +E+AE E + N LA +I+ I K DP+ + ++ +H Sbjct: 174 SEMAEQAPGSEIVANRLAEVLFIQILRAHIASGPERNKGWLRAIFDPK---MGTALSAIH 230 Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254 S++ W+V +A S + F G+TP EY + R+ A+ LL+Q+ + + Sbjct: 231 DSVKTPWTVESLAEAAGMSRSAFAARFKELLGQTPLEYVTEWRMQKAMQLLQQRDKKLID 290 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 VA ++ + FSKAFK G P LK Sbjct: 291 VARSVGYESGAAFSKAFKRVVGINPGEYLKG 321 >UniRef50_B9JE85 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JE85_AGRRK Length = 296 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 50/94 (53%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + +L+ + ASL++ S+AD+A S+ + R F TG P Y + RL+ A LL Sbjct: 194 LRRLMEMIEASLERPVSIADLAREADLSDHHMSRAFRLSTGLPPHAYMIRRRLERAAELL 253 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 + S+ EVA + + HFS AF+ + G AP Sbjct: 254 RFSSASITEVAYMCGYSNPSHFSTAFRGEMGIAP 287 >UniRef50_B7VRW6 Putative AraC-family transcriptional regulatory protein n=9 Tax=Vibrionales RepID=B7VRW6_VIBSL Length = 279 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 18/224 (8%) Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPV 124 +YTV+G G + I G+CI ++ + + E W+ W+ +P + V Sbjct: 57 LYTVRGKGWLESGACRYILEPGSCITVPAGIE-NGFGIEEETWQIAWIFLSPDKKWEGVV 115 Query: 125 GQQSVIYNGEIYNQELTEVAELITS-------PEAIKNNLAVAFLTKIIYQWICLMYADG 177 + N L+ AE+++S A+ +L A + Q ++ A Sbjct: 116 SDE--------VNYTLSPAAEVVSSCIHTLLRSIALPIDLGGAIAIHSVAQIEFMINAPV 167 Query: 178 KKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 + R ++ ++ + L + W+V ++A+ PCSE RL RY +P + + Sbjct: 168 PQQQSRNLIRLRRVFDNVQKQLHKEWNVHELASLFPCSEPHFHRLCQRYYSHSPMTHIMR 227 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 R++ A LL+ S+ + + + + ++ +FS FK G P Sbjct: 228 MRMEYAARLLRSSDWSIQHIGEIVGYPNAANFSTRFKAWSGMTP 271 >UniRef50_Q0FAD1 Transcriptional regulator, AraC family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FAD1_9RHOB Length = 317 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 53/97 (54%) Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 ++++K + +H +++ ++ ++A I S L R FL+ G++PK+ YL+ RL Sbjct: 214 QEVQKALEIMHKNIEDILTIPNIANKIGISSKQLHRFFLKDLGQSPKKVYLNIRLSFGRH 273 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 LL+ + EVA + + FS+AFK +F PS Sbjct: 274 LLQATQKPINEVALRSGYENVSAFSRAFKMRFDQTPS 310 >UniRef50_C6XTD1 Cyclic nucleotide-binding n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XTD1_PEDHD Length = 319 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 44/75 (58%) Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264 ++A S L RLF++ G T ++ + R+ A+ LLKQ G +VG++A T + + Sbjct: 239 EIAKQFNTSTRTLNRLFVKTFGLTVSKFIVKLRMAKAMELLKQPGLTVGQIALTAGYKNI 298 Query: 265 FHFSKAFKHKFGYAP 279 FHFSK FK +GY P Sbjct: 299 FHFSKVFKMYYGYPP 313 >UniRef50_Q2GAB8 Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GAB8_NOVAD Length = 299 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 50/96 (52%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 ++ K++ + A S+ MAA + + RLF + G TP +Y + ARLD A + Sbjct: 193 RLHKIMNAILADPAAEHSLEAMAAVAGVTPSHFCRLFKKAIGITPHQYVMKARLDRAQQM 252 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 L Q S+ +++ F HFS+AF+ FG APS Sbjct: 253 LVQTEMSLAALSEAAGFASQSHFSRAFRSWFGMAPS 288 >UniRef50_C6VNH1 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNH1_LACPJ Length = 275 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 46/81 (56%) Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261 ++ +AA++ S A+L R F G+TP Y R+ A LL Q+ +V +VA + + Sbjct: 193 TLGTVAASLHVSAAYLSRTFKAIQGETPISYLTRLRMQRAKQLLMQEAITVRQVAHAVGY 252 Query: 262 FDSFHFSKAFKHKFGYAPSAV 282 D ++FSK FK FG AP+ + Sbjct: 253 QDPYYFSKVFKRYFGAAPTLI 273 >UniRef50_A9FWP2 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FWP2_SORC5 Length = 304 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 49/103 (47%) Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 R++ +++ + +RWSV +A S A L R FL G P Y + R+ A Sbjct: 186 RRVARVLRLMQEKPAERWSVEALAKAAGLSRAALARRFLAELGVPPLRYLAELRMQRAAE 245 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 LL + S+ VA + + F FS+AFK G AP A + + Sbjct: 246 LLAEGDGSLAAVAAEVGYDSEFAFSRAFKRHTGEAPGAFRRRS 288 >UniRef50_D1V7I4 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales RepID=D1V7I4_9ACTO Length = 308 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 6/148 (4%) Query: 142 EVAELITSPEAIKNNLAVAFLTKIIYQWI---CLMYADGKKDPQRRQIEKLIATLHASLQ 198 EV E EAI ++L A L I+ W ++ DP + + +H Sbjct: 156 EVEEQEPGAEAIVSSLVGALLVYILRAWQEDHPSGWSRALADPA---VGPSLHRMHRDPA 212 Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADT 258 + W+V + A S A R F G+ P Y RL A +L+QQ + VA + Sbjct: 213 RPWTVEQLGAAAGVSRATFTRRFTALVGEPPLTYLTRWRLTSAARMLRQQDVPLSVVAHS 272 Query: 259 LNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 + + F F+KAFK ++G AP + T Sbjct: 273 VGYTSEFAFAKAFKREYGLAPGTYRRVT 300 >UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas RepID=A4VLS2_PSEU5 Length = 377 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 52/96 (54%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 ++ K+I ++ L + +S+A +A + SE R+F R TG +P +Y++ R+ A L Sbjct: 277 KLRKVIGVMNERLAEEFSLAALAQVVELSEYHFSRMFKRATGLSPSQYFIGLRMARARQL 336 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 L + S+ ++ + + HFS+ F+ + G PS Sbjct: 337 LLETPRSIIDIGLEVGYSSPSHFSQVFRREVGVTPS 372 >UniRef50_B5WL81 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. H160 RepID=B5WL81_9BURK Length = 335 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 45/88 (51%) Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 L + ++ SV D A TI SE RLF R G TP +Y L ARL+L LL + + Sbjct: 231 LERNCGRQISVGDAARTIAMSERNFLRLFKREMGTTPSQYLLQARLNLGCELLARSDLPI 290 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPS 280 ++A + FSK FK +F +P+ Sbjct: 291 DKIARRTGLTNGERFSKVFKKQFAMSPT 318 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 53/99 (53%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 ++K I+ + + Q +++D+A+ E +LR+LF +Y +P +Y R++ A+ LL Sbjct: 189 LKKAISYIRLNYQSDITISDVASQTGVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELL 248 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 + SV EV F +FS+ FK + G +P V K Sbjct: 249 RNTEMSVKEVCFACGFQSPQYFSRIFKQQMGISPREVTK 287 >UniRef50_D0LBD5 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LBD5_GORB4 Length = 385 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 22/173 (12%) Query: 113 EFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITS-PEAIKNNLAVAFLTKIIYQWIC 171 EF PTS P G I LT++A P A + A + + + + Sbjct: 171 EFAPTSR---PAG---------IVGTLLTQIANADAPIPRAASTSFATSVVDMLTTTIMA 218 Query: 172 LMYADGKKDPQRRQ----IEKLIA-TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226 + A+ +K+ R Q I+++IA LH +S++D+AA S +++L + TG Sbjct: 219 ELPAEHRKESFRSQDLARIQQVIADNLH---DADFSLSDLAAQAGMSARNVQKL-VATTG 274 Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +P + AR++ A LL G SV EV++ + F D HFS+ F+ + G +P Sbjct: 275 NSPMAWLYAARIERAKHLLMSTGQSVAEVSECVGFRDVSHFSRMFRKQVGVSP 327 >UniRef50_D1N7S2 Transcriptional regulator, AraC family n=2 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7S2_9BACT Length = 302 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 57/101 (56%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 +++++ L A L Q S+ ++A S+A LRRLF ++ G++P ++ + R++ A+ LL Sbjct: 198 LQRILRYLEARLDQPVSIGELAEEFRLSQATLRRLFRKHLGESPVDFLIRRRMETAMRLL 257 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 + V +A + + + +FS F+ G +PSA K + Sbjct: 258 RLTEQPVKWIAFQVGYAGALYFSAEFRKFTGESPSAFRKRS 298 >UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n=2 Tax=Oceanospirillaceae RepID=Q2BQ54_9GAMM Length = 304 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 48/233 (20%), Positives = 102/233 (43%), Gaps = 14/233 (6%) Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTSMMDIP 123 +Y + G G+ ++ +G++ + I+ + H+Y W YW+ F D Sbjct: 62 IYCLDGEGEAVI-DGQKTRIRSGDILLIPKGVSHTYQARKRKPWTIYWVHFHGHHAEDFA 120 Query: 124 -------VGQQSVIYNGEIYNQELTEVAELITSPEAIKN---NLAVAFLTKIIYQWICLM 173 Q+ + I+++ ++ L+ + E+ N + A + I I L+ Sbjct: 121 QHLQQRESNQRRYVMPIGIHSRLASDFEALLEARESTYNLNAYICAANQLRQILSHIALL 180 Query: 174 YADGKKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 K+ R IE++ + + + ++ + +A +I S+ + + TG TP Sbjct: 181 QPLAKQKQSRGGLDIERVHSLMQTHIHEQLDLDTLAESISLSKYHFVKKYKEVTGTTPIN 240 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 +++ +++ A LL N + EVA + + D+++FS+ FK G +PS K Sbjct: 241 HFIQLKIERACHLLDTTNNGINEVAFAVGYEDAYYFSRIFKKLMGVSPSQYRK 293 >UniRef50_Q1QE65 Transcriptional regulator, AraC family n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QE65_PSYCK Length = 311 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 3/103 (2%) Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 KDP + K + +H + Q WS+ ++A S + + F G P Y +D RL Sbjct: 201 KDPF---LTKALVAMHENPSQNWSIHELAEVAGMSRSSFAQRFKDVVGMPPLTYLIDYRL 257 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 LA L+ Q NS+ +++ + + FS+AFK +G +P A Sbjct: 258 RLAARYLRLQQNSISRISELVGYASDSTFSQAFKRVYGISPKA 300 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 19/237 (8%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114 P I + ++ Y + G G+ + NG TL + P Y + WE W+ F Sbjct: 37 PGIRDHYLIHYIISGKGRYTV-NGSVHTLTPGDAFLVYPNTEVIYQADAQDPWEYTWVGF 95 Query: 115 TPTSMMDIPVGQQSV--------IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166 T + I + NG ++L + + +N L +T + Sbjct: 96 TGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYD--ARGTEFENALE---MTGRL 150 Query: 167 YQWICLMYADGKKDPQRRQ----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFL 222 Y + L + P + ++K I + A+ +V D+A+ I S + L R F Sbjct: 151 YTTLALFVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIGLSRSHLFRSFQ 210 Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 G +PKEY D R+ A LLK S+ +A ++ F +S +FSK F G +P Sbjct: 211 SILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKIKGLSP 267 >UniRef50_A1AM63 Transcriptional regulator, AraC family n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AM63_PELPD Length = 311 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 55/107 (51%) Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239 D ++ ++ L AS+ S+ ++A + S ++ F R G P Y + RL+ Sbjct: 184 DREKSAVDAACKLLEASMDNPPSLEELATQVGMSATRFKQAFSRIRGVPPFAYLRNLRLE 243 Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 A+ LL+ +G V EVA + + + HF+K F+ +FG PS V + T Sbjct: 244 RAMCLLRYEGLRVTEVALEVGYNNFSHFAKIFEARFGIVPSRVRRET 290 >UniRef50_Q9K6M6 Transcriptional regulator n=1 Tax=Bacillus halodurans RepID=Q9K6M6_BACHD Length = 279 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 53/232 (22%), Positives = 108/232 (46%), Gaps = 21/232 (9%) Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH---CEGLVWEQYWMEFTPTSMMD 121 + TV G G I+ +N QI L N + L P HSY + W+ ++ F+ T + + Sbjct: 42 IQTVSGQGSIMFQN-RQINLTTNNGVLLLPHIPHSYQNAQSDSTPWQTLYVTFSGTMVKE 100 Query: 122 IPVGQQSVIYNGEIY--NQEL---TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + + + +Y + NQE T +A+++ + +++ +++ + +Y+++ L+ Sbjct: 101 VLITLE--LYQSAFFHWNQEAPISTFLAKVLKQSDETRDSFSIS-ASSAVYEFLLLLKKY 157 Query: 177 GKKDPQRRQIEKLIATLHAS---LQQRWSVAD-----MAATIPCSEAWLRRLFLRYTGKT 228 GK + + + L++ ++ + S D MA I S+ L LF + T Sbjct: 158 GKTNNSNAKETNHLVRLYSLIDWMKTQLSNPDVGLDEMARFINTSKRHLNSLFQKNFHLT 217 Query: 229 PKEYYLDARLDLALSLLKQQG-NSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 P Y+++ R+ + LL + ++GE+A + F + HF F+ G P Sbjct: 218 PYAYFVNLRIQQSKKLLLEDNCATIGEIAKQVGFRSTSHFVATFRKMVGIPP 269 >UniRef50_C7QI96 Transcriptional regulator, AraC family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QI96_CATAD Length = 315 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 3/104 (2%) Query: 177 GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDA 236 G DPQ I ++ +H + W+V ++A S + F+ GK P Y Sbjct: 204 GAFDPQ---IGLALSAIHRDPGREWTVEELARACNLSRSSFAARFVERVGKPPATYLAHV 260 Query: 237 RLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 RLD A +LL+ V +VA+T+ + FS+AFK+++G P+ Sbjct: 261 RLDAATTLLRDTFLPVTQVAETVGYASEAAFSRAFKNRYGTPPA 304 >UniRef50_C1D3S3 Putative transcriptional regulator, AraC family n=1 Tax=Deinococcus deserti VCD115 RepID=C1D3S3_DEIDV Length = 226 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 48/95 (50%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 ++ + +A +HA + + +AA + SE RL R TPK++ L R D AL L Sbjct: 118 RVAQALAFMHAHFARPLRTSALAAQVGLSEDSFERLMRRVCHMTPKQFLLRVRFDAALRL 177 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 L++ SV ++A + D FS+ F+ G+ P Sbjct: 178 LRESRRSVADIAHECGYSDHSAFSRKFRAMTGFTP 212 >UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NB22_9BACT Length = 297 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 50/101 (49%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 ++ ++I+ L + + W + ++A S L RLF TG +P +Y + RL A Sbjct: 195 RVGRIISLLESEFMREWRLEELAKLAATSPNNLLRLFRTVTGTSPVDYLIRVRLRRAAEA 254 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 LK +V E+A F DS +F++ F+ +G +P K Sbjct: 255 LKNTPGAVAEIAADCGFADSNYFARKFRAAYGVSPREFRKR 295 >UniRef50_C2FW53 AraC family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FW53_9SPHI Length = 326 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 3/102 (2%) Query: 182 QRRQIEKLIATLHASLQ---QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 ++ IEK+ A LQ Q +S+ D+A + ++ L++ F G T ++ D ++ Sbjct: 221 KKSDIEKIYAVREFMLQHIDQSYSLTDLARRVGTNDFLLKKGFKELFGTTVFGFWNDTKM 280 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 + A +++ Q ++ EVAD + + + HF+ AFK +FG APS Sbjct: 281 EQAHKMIRDQHMNISEVADAVGYKNPQHFTVAFKRRFGIAPS 322 >UniRef50_A8HRE8 Transcriptional regulator n=3 Tax=Alphaproteobacteria RepID=A8HRE8_AZOC5 Length = 336 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 49/96 (51%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + K + + L++ S ++AA S+ L RLF R+ +P +YLD RL A LL Sbjct: 237 LAKAVEVMARHLERPLSTGEVAAAANLSQRQLERLFQRHLSASPAAFYLDLRLARARELL 296 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 + V +VA F + HFS A+ +FG+ P A Sbjct: 297 RLSPLPVTDVALACGFQSAAHFSVAYGRRFGHPPRA 332 >UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium cellulovorans 743B RepID=C5RL17_CLOCL Length = 282 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 46/237 (19%), Positives = 99/237 (41%), Gaps = 16/237 (6%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114 P + ++ Y G G + NG L + P DI +Y + W W+EF Sbjct: 37 PNLKERFLIHYIFSGKGSFEI-NGYTYNLESGQGFLISPGDIATYKADDKDPWTYAWVEF 95 Query: 115 ----TPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI 170 + + I + ++ +++ + ++L E + K+ + +Y ++ Sbjct: 96 NGRLSEKFLHQIGLSSKTPVFSCK--KKDLLEASFQYIFDACKKSRNNNLLILSSLYHFL 153 Query: 171 CLMYADGKKDPQRRQIEKL--------IATLHASLQQRWSVADMAATIPCSEAWLRRLFL 222 +++ + + EKL + + + + +++MA + + ++ LF Sbjct: 154 AMIHEASAPEQTEKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLSLNRNYMSTLFK 213 Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 G TP+ Y ++ R+D A L+K ++GE++ + + D FS+ FK FG P Sbjct: 214 ESVGITPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMFKKLFGIPP 270 >UniRef50_C6CXM1 Transcriptional regulator, AraC family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6CXM1_PAESJ Length = 279 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 6/129 (4%) Query: 155 NNLAVAFLTKII----YQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210 N + +AF T I+ YQ + A GK D + I +++ +HA + +V ++A+ Sbjct: 144 NIMRIAFETVIVLFQRYQALFSQTAGGKND--QTVIHEVLKEIHARFYSQLTVHELASKH 201 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 SE+ LR+ F G +PK+Y ++ R++ A LL+Q ++ ++ + F S F Sbjct: 202 FVSESNLRKKFTEIVGVSPKQYMINLRMEEAKRLLRQTDKAIESISSEVGFTSSSRFYDF 261 Query: 271 FKHKFGYAP 279 F G P Sbjct: 262 FVKSVGVTP 270 >UniRef50_C6JDE2 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDE2_9FIRM Length = 242 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 51/96 (53%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 I KLI + +++ + +AD+A + + +LR+ F + G + K Y + R+ A LL Sbjct: 144 IYKLIKEIDSTMLFQKRIADIAEELNYNPDYLRQKFKKIAGVSLKAYIMQQRIQNACKLL 203 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 +Q+ S E+A F S FS+ FK K GY P + Sbjct: 204 EQENYSCTEIAQLCGFSSSSQFSRIFKEKMGYTPKS 239 >UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP2_9CLOT Length = 327 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 69/127 (54%), Gaps = 3/127 (2%) Query: 166 IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRW---SVADMAATIPCSEAWLRRLFL 222 ++ + +Y++ K + R + +A + +++ + ++++ A T S ++L L Sbjct: 201 LFTELARVYSERKTNQPARPAKPGMAEIIGFIRENYATVTLSETAKTFSYSPSYLSYLIK 260 Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282 + TG+T KE D R++ A + LK ++ ++++ L F DSF+ +K FK ++G +PS Sbjct: 261 KETGQTFKEIVRDFRIESACNFLKNTQLTLEQISEILGFQDSFYIAKVFKQRYGISPSEY 320 Query: 283 LKNTDQH 289 K + Q Sbjct: 321 RKRSRQQ 327 >UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=Geobacter sp. FRC-32 RepID=B9M3B3_GEOSF Length = 292 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 48/101 (47%) Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242 R +I +++ LH ++ +V MA S + R+F + TG +P Y +D RL A Sbjct: 186 RIEINRVVEYLHRRYGEKVTVDKMATVAAMSPSHFSRVFRKETGLSPMNYLIDLRLAKAR 245 Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 LL V VA F HF+ F+ +FG PS V+ Sbjct: 246 RLLVSGETCVTSVALRCGFASHSHFTDTFRKRFGCPPSDVM 286 >UniRef50_C2AR91 DNA-binding domain-containing protein, AraC-type n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AR91_TSUPA Length = 271 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 17/217 (7%) Query: 75 LLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWM---------EFTPTSMMDIPVG 125 LL +G + + + P + Y G +Y E P + + +P+G Sbjct: 44 LLIDGVSYQIRPGAVSLVPPGAVTEYRYRGPSRHRYVHFSAPADADPEHGPGAPLVVPLG 103 Query: 126 QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ 185 + Y N L VA I PE + +A L +++ + + A + Sbjct: 104 PE---YPAIDENFRLA-VANAILRPERSAAEIWIA-LHRVLDRAVS---AGAPANDPVDH 155 Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + + ++ + A LQ R +VA +AA + S L RLF TG+T Y R++ A+ LL Sbjct: 156 VAQALSIIEARLQDRLTVAGIAAEVGISHTHLTRLFRAETGRTVIGYVRHRRIERAVHLL 215 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282 + + VA T+ F D F+K+ + + G +P V Sbjct: 216 RHTTMPIAAVAATVGFDDPQAFNKSCRVESGLSPRGV 252 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 50/99 (50%) Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241 +R + I L + ++ +A + + +L + F TG P Y + RL+ A Sbjct: 172 KRNLVNHTIYYLETHHDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHA 231 Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 LLK SV EVA T+ + D++HFSK FK +G +PS Sbjct: 232 KELLKNDSLSVKEVAKTVGYEDAYHFSKLFKKYYGKSPS 270 >UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-like protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A4H9_9BACT Length = 307 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 3/102 (2%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 Q+ +I T + ++ + +A S + L R F G++P Y L+ RL A L Sbjct: 203 QVRDIIRTRY---REELHLTTLAKDAGLSPSHLSRRFKARFGRSPISYQLELRLQSACEL 259 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 L+ +G S+ E+A + F D F+FS+ F+ + G AP + K + Sbjct: 260 LRTRGESLAEIAAAVGFEDVFYFSRLFRRRLGEAPGSFRKAS 301 >UniRef50_D1N759 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N759_9BACT Length = 261 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 98/254 (38%), Gaps = 29/254 (11%) Query: 44 HYRVIWPRDKKKPLIANSWVAVY-TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 HY V P+ P + + +Y V GCG+ L+ N + F P D H Sbjct: 23 HYTV--PKGWSDPPLVKPILELYWCVSGCGR-FGSGASGWLLNENQVCFYFPGDRHEITA 79 Query: 103 EGLVWEQYWM-------EFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155 E ++ +W+ F S + E++ + E+ +L E Sbjct: 80 ESASFDYWWLTIDGPNVPFLIDSFRLERPSRPVAPCPEELFLKLAREIRDLGRDGEYRAG 139 Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRW-----SVADMAATI 210 A LT+ + P + LI +++R+ SV ++A + Sbjct: 140 ATAYEILTRAML-------------PPSGEESGLILRFKQLVEERYDDPALSVRSLSAAL 186 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 + L RL R+ G P+EY RL +A+ +L + SV E+A+ F D +F K Sbjct: 187 GVHRSTLTRLVTRHCGMPPQEYLTGFRLQIAMQMLHESAVSVKEIAEATGFSDQNYFGKV 246 Query: 271 FKHKFGYAPSAVLK 284 F + G P+ + + Sbjct: 247 FLKRLGKTPTQMRR 260 >UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=Cyanobacteria RepID=B0C3V1_ACAM1 Length = 283 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 2/129 (1%) Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210 +++ N LAV L + L +G P RQ+++++ + A L +AD+A + Sbjct: 151 DSLANILAVNLLRHHATKRPQLPIYEGGLPP--RQLQQVLDYIDAHLDCEIKLADLAQIL 208 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 S RLF TGK+P +Y + R++ A LLKQ + ++A F H SK Sbjct: 209 DMSPFHFSRLFKLSTGKSPHQYLIQQRIEHAKQLLKQTDRRIIDIAYECGFNSHSHLSKQ 268 Query: 271 FKHKFGYAP 279 F+ G P Sbjct: 269 FRQMMGVTP 277 >UniRef50_UPI000197B404 hypothetical protein BACCOPRO_02224 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B404 Length = 270 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 52/103 (50%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 ++E + +HA+ + + ++A S + ++F + TP Y + R++ AL L Sbjct: 164 RLEPAMRYMHANYKDTIHLKELACMCNVSPNYFHKIFKQTFKITPTNYIILLRMNSALQL 223 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 LK G ++ E+A L F D+ HF K FK +G P +N + Sbjct: 224 LKDNGVTIKEIAFELGFTDNAHFCKTFKKYYGITPGEYQRNQN 266 >UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=Desulfovibrio RepID=B8DKQ8_DESVM Length = 292 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 5/129 (3%) Query: 157 LAVAFLTKIIYQWIC-----LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211 L + +++++ +C ++A K+ +IEK + +H + + ++V +A + Sbjct: 156 LGPGLVRELLFRVLCGENAAALHALATKNTNMSRIEKALKQIHGNFSEPFNVDQLAGFVN 215 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 S + R F T +P +Y RL+ A SLL++ G E A + + FS+ F Sbjct: 216 MSPSTFHRAFKDVTAFSPIQYLKRVRLNKARSLLREDGVRASEAARMVGYESVSQFSREF 275 Query: 272 KHKFGYAPS 280 + FG +PS Sbjct: 276 RRYFGISPS 284 >UniRef50_C0Z8E4 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8E4_BREBN Length = 548 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 55/99 (55%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 +++ I+ +H + + ++ D+A + + +F + GK+P EY R++ A +LL Sbjct: 172 VDQTISYMHTNYAEPITLDDLANRAGLTPRYYTEVFKKKVGKSPIEYLTSCRMEHAKTLL 231 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 ++ + EVA + + D F+FS+ FK + G +P+ ++ Sbjct: 232 RESNKRLREVARLVGYADEFYFSRRFKQQVGVSPTVFVR 270 >UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSF8_CLOPH Length = 292 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 ++++I L + + + S+ +A + S ++ ++F TG++P Y + RL+ A +L Sbjct: 182 VKRIINYLMENYEHKISLDQIAHNMYLSPVYISKIFKEETGESPINYLIKIRLEKAKEIL 241 Query: 246 -KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +++G S+ +A+ + + D +HFSK FK FG +P Sbjct: 242 SEREGGSIKNIANEIGYDDVYHFSKLFKKYFGISP 276 >UniRef50_Q4A0B7 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0B7_STAS1 Length = 293 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 1/101 (0%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +++++++ +H Q + ++ ++ I SEA RLF +Y +TP EY L RL+ + S+ Sbjct: 188 RVKQMMSYIHKHFQDKITLGHLSQNIYLSEAEAIRLFKKYVKQTPFEYLLRYRLEQSKSI 247 Query: 245 L-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 L K + +++ E+A F + +F K FK ++G P K Sbjct: 248 LDKDRLSTITEIAMACGFSTTSYFIKVFKARYGMTPKQYQK 288 >UniRef50_B6W1X0 Sensor protein n=6 Tax=Bacteroides RepID=B6W1X0_9BACE Length = 1447 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 1/102 (0%) Query: 183 RRQIEKLIATLHASLQQ-RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241 R+ EKL L L +++ D A+ + S A R TG TP EY R+ A Sbjct: 1343 RKFGEKLQTILEKQLDNPEFTIEDFASAVGVSRAAFFRKVKGVTGYTPNEYMRILRMKRA 1402 Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 + LL++ +V E+A + D +FSK FK FG PSA L Sbjct: 1403 MELLQEGIYNVSEIAYKVGMNDPLYFSKCFKSHFGAPPSAYL 1444 >UniRef50_B5ZT32 Transcriptional regulator, AraC family n=9 Tax=Rhizobium RepID=B5ZT32_RHILW Length = 340 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 50/98 (51%) Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241 Q ++ +I + +L + S+ ++A S + RLF + G++P YYL+ RLD A Sbjct: 222 QNAKVLSIIELMEGNLAEPLSLIEIADGAGLSRRQIERLFRQEMGRSPARYYLEIRLDRA 281 Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 LL Q V EVA F + HFSK ++ + +P Sbjct: 282 RHLLVQSSMPVVEVAVACGFVSASHFSKCYRELYHRSP 319 >UniRef50_C3JN73 Transcriptional regulator, AraC family n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JN73_RHOER Length = 379 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 47/95 (49%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +I + + +H + W++ ++A S + F R G+TP Y + RLD A L Sbjct: 274 RIGQALEAVHNDPSRNWTIDELATLSTLSRSSFAERFSRLVGQTPGAYITERRLDRAAEL 333 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 L Q VG +A T+ + FS+AF+ +F +P Sbjct: 334 LVQTTEPVGTIAITVGYESDAAFSRAFRRRFDASP 368 >UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=Marinomonas RepID=A6VUH3_MARMS Length = 316 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 3/111 (2%) Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242 ++I+ L+ +H++ ++R S+AD++ SE+ R+F +P Y L+ RL ++ Sbjct: 193 EKRIQSLLNFIHSNYEERISIADISEAANISESECYRIFRNALNCSPNSYLLNYRLRKSV 252 Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN---TDQHP 290 LL + + ++A F S +F+K FK F P KN T HP Sbjct: 253 QLLTESNKQIADIAFESGFNCSAYFAKKFKLAFNVTPMQFRKNYSVTLDHP 303 >UniRef50_C5BRT4 Helix-turn-helix-domain containing protein, AraC type n=2 Tax=Gammaproteobacteria RepID=C5BRT4_TERTT Length = 320 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 49/101 (48%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 I +A +H ++ W+V +A + S + F G++ K Y R+ LA S L Sbjct: 216 IGSALAAIHREPERNWTVDTLAREVGLSRSGFSARFSELVGESAKRYITHWRMQLARSKL 275 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 G S+GE+AD L + F +AFK G +P ++ K+ Sbjct: 276 LDSGISMGELADQLGYHSEAAFCRAFKRVIGVSPGSIKKSA 316 >UniRef50_B9Z8M5 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8M5_9NEIS Length = 327 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 3/112 (2%) Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 Q I L G P+ + + ++ + A++++ + D+A + S L RLF ++ Sbjct: 204 QRIPLATRIGASQPK---LTEAVSLMEANIEEPLTTDDIAYYVGISRRQLERLFKQHLSA 260 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 P +YYL+ RL A LL+Q S+ ++ F HFS ++++ FG P Sbjct: 261 VPSKYYLELRLKRARQLLQQTSKSIVQIGLACGFSSGPHFSSSYRNHFGITP 312 >UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJL7_CALS8 Length = 291 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 51/94 (54%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 IEK+I + + ++ D+A + S +L LF + G T KEY ++ RL + L+ Sbjct: 179 IEKIIEYIKNHYMEDITLDDLAKMVYLSPTYLSYLFKKQLGITFKEYLINIRLKKSKELI 238 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 + S+GE++ + D +FS+ FK KFG +P Sbjct: 239 ETTDLSIGEISKMVGIEDQNYFSRLFKKKFGVSP 272 >UniRef50_Q1QSP4 Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QSP4_CHRSD Length = 327 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 6/141 (4%) Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATI 210 LA A ++I+ + + ++D +R + + +A + L+ +A +AA I Sbjct: 186 LAAAVSEQLIHARMRPRHDQQRQDLTQRLGTHKHSVIEAVALMERHLEAPLPLARLAARI 245 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 S L+RLF + G+ P+++YL RL A LL++ + + F + FS+A Sbjct: 246 GISLRQLQRLFEQELGERPRDHYLRLRLQRARQLLRETDRDILSIGLACGFTSASSFSRA 305 Query: 271 FKHKFGYAPSAVLKNTDQHPT 291 +K FG +P + D PT Sbjct: 306 YKQHFGASPRHARRGPDTPPT 326 >UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPD4_9CLOT Length = 532 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 3/111 (2%) Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229 +C DG R I++ I ++ + ++ D+A + + A+L +F + TG+T Sbjct: 418 LCQRQKDGMGSRPVRMIKEYIGEHYS---ENITLNDIADIVFLNPAYLSAMFKKETGQTL 474 Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 +Y +D R+D A +L+ ++GE+A + + D HFSK F G P+ Sbjct: 475 TQYLIDVRIDKAKEMLRNPERTIGEIACMVGYQDERHFSKLFSKMTGVKPT 525 >UniRef50_C5AH65 Transcriptional regulator, AraC family protein n=9 Tax=Proteobacteria RepID=C5AH65_BURGB Length = 269 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 47/86 (54%) Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254 A L ++ ++ ++AA +LF R T TP + + RL+ A +L + S+ E Sbjct: 182 AHLAEKITLDELAALCGVDRFVFLKLFKRTTAMTPHAWLVRLRLERACLMLHRGTQSIAE 241 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPS 280 VA + F+D HF++AF+ FG APS Sbjct: 242 VAQAVGFYDQSHFNRAFRRAFGCAPS 267 >UniRef50_A1R3X3 Transcriptional regulator, AraC family domain n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R3X3_ARTAT Length = 175 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 3/117 (2%) Query: 174 YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233 +A G +DP + + +A LH W+VA++A S A + F G++P Y Sbjct: 51 WAAGTRDPI---VARALAALHQEPAAPWTVAELALRCHVSRATMAARFRAAVGQSPMAYL 107 Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHP 290 RL LA L + +A+ + + ++F FS AF ++G +PS ++ P Sbjct: 108 TTRRLALAADRLASSTVTTAVIAEEVGYSNAFTFSAAFSREYGVSPSGYRRSASFPP 164 >UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ5_9FIRM Length = 301 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 50/94 (53%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 +E I + Q+ ++D+A I S A+L F + G + + + +D ++ A SLL Sbjct: 186 VELAIEYIKDMYQKGIGISDIADNIGISRAYLNSSFQKELGMSAQTFLIDYKMHKAASLL 245 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 SV E+A+ + + D FSKAFK KFG +P Sbjct: 246 VSTSLSVKEIANNVGYEDQLVFSKAFKKKFGMSP 279 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 51/101 (50%) Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 P + ++ + + + + D+A I S + L F + G +P+EY ++ RL+ Sbjct: 206 PSKIYVKAAVDFITEKYMNKIKIDDIADFIGISRSHLTGSFKKEMGVSPQEYLINFRLEK 265 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 A SLL+ + +A + DS FSKAFK KFG +P + Sbjct: 266 AASLLRSSKEQINIIAYQCGYEDSLSFSKAFKQKFGMSPKS 306 >UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X9W6_OXAFO Length = 293 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Query: 177 GKKD-PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 GKK+ P R++++ +A + + S+ D+A + S++ R F TP +Y ++ Sbjct: 182 GKKEKPVSRRMQRFLAYIEKHYAEAISLDDLAGSGNVSKSECLRCFRVSMQTTPYKYLVE 241 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 RL A LL++ VGE+A F + +F K F+ K G++P Sbjct: 242 YRLSKAAILLQETDKPVGEIASCTGFHQASYFGKCFREKTGFSP 285 >UniRef50_A6LQ44 Helix-turn-helix-domain containing protein, AraC type n=3 Tax=Clostridium RepID=A6LQ44_CLOB8 Length = 223 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 51/100 (51%) Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 I +++ LH +++ + S+ ++ + SE ++ F ++ G T +Y R+D A LL Sbjct: 121 INRILKHLHLNIESQISLKKLSGELNLSEGYISDCFKKHMGMTIMKYAKKIRIDRAKVLL 180 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 +S+ E+ TL F D HF K FK G +PS N Sbjct: 181 VTTTSSILEIGLTLGFHDQSHFHKVFKSFTGVSPSEYRNN 220 >UniRef50_A4WA52 Transcriptional regulator, AraC family n=10 Tax=Proteobacteria RepID=A4WA52_ENT38 Length = 308 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 2/152 (1%) Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLA-VAFLTKIIYQWICLMYADGKKDPQRRQIE 187 V + ++Y + A L ++ A ++A + F+ Y+ RR ++ Sbjct: 153 VTTDEDLYRRFCELNATLFSTASAEDKSVALIEFIGDCEYESCVAKAFPVMSSEVRRTLK 212 Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247 +I + + +Q W++A++A S + R F TG TP Y L+AR++ A L Q Sbjct: 213 NVIDMMQQTERQPWTLAELAHLSGMSRYQIIRAFRAATGMTPHAYQLNARINQARRWL-Q 271 Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 G+ + ++A L F D HF + FK G P Sbjct: 272 SGHDMADIAYRLGFADQSHFQRVFKAHTGVTP 303 >UniRef50_C0AA65 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AA65_9BACT Length = 288 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 38/65 (58%) Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 L RLF R+TG+T +Y L+ RL A LL+ +G +V EVA F +F + F+ +G Sbjct: 223 LSRLFSRFTGRTFSQYLLEFRLKKAAVLLEGKGRTVAEVAAACGFGSDAYFVRCFRRHYG 282 Query: 277 YAPSA 281 + P A Sbjct: 283 HTPGA 287 >UniRef50_D1T3G0 Transcriptional regulator, AraC family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3G0_9BURK Length = 285 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 1/101 (0%) Query: 181 PQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239 PQ R Q E+L + + Q SVA+MA T S RLF + K+P +Y ++ R++ Sbjct: 178 PQLRGQWERLRLYIDEHIGQPISVAEMARTTGYSTHHFARLFRQSFQKSPHQYVIERRIE 237 Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 A LL G SV +VA F H S AF+ + G P Sbjct: 238 RARQLLLDPGRSVADVAAECGFATQAHLSSAFRRRLGLTPG 278 >UniRef50_C1D5R0 Activator protein MtlR n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5R0_LARHH Length = 279 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 20/238 (8%) Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWMEF--TP 116 S + + +G G + + + + L + ++FL P H + +G +W+ + Sbjct: 31 SQIVLPFTEGVG-VRIGQSDPVELPVDSVLFLSPFVHHHIDGNVQGAIWDTLAVNLYRMG 89 Query: 117 TSMMDIPV----------GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166 S ++ P G ++Y GE+ Q T L S +I++ L V + ++ Sbjct: 90 PSFINSPYLGEIHSLYRDGFAGILYRGEVAQQVRTHFKRLENS-FSIEHMLGVLSILHLL 148 Query: 167 YQWICLMYADGKKDP-QRRQIEKLIAT---LHASLQQRWSVADMAATIPCSEAWLRRLFL 222 Q + P RR+IE ++ ++ + +A +AA I S A R F Sbjct: 149 SQSDGWPLTPAEVHPMDRREIELCVSIDDYVNNHIDTPIDIASVAARIHMSTASFCRFFR 208 Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 RY G + + LD +++ A L + ++AD L F + HFS FK + G P Sbjct: 209 RYFGMSFHAWLLDKKIETACYQLHVGTAPIQDIADRLGFHSASHFSMTFKRRMGITPG 266 >UniRef50_Q1QY53 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QY53_CHRSD Length = 263 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 1/101 (0%) Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256 L +R +V D+A SEA F R+TG TP +Y L RL+ A +LL+ + +VA Sbjct: 162 LAERITVGDLARLACLSEAHFSERFRRHTGLTPYQYLLRRRLEHASALLRGAAIPLSDVA 221 Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297 F S AF+ +G PS + +N P A+ HN Sbjct: 222 ARTGFASQSALSHAFRRHYGQPPSRLRRNGAT-PLAATHHN 261 >UniRef50_C7G8V7 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8V7_9FIRM Length = 289 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 2/105 (1%) Query: 177 GKKDPQRRQIEKLIATLHASLQQ-RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 G+ D +++E + + + + + + + S L RLF TG +PK+Y L+ Sbjct: 181 GRSDEDEKRMEMAVLLIKNHYHKSEFHIQRLCEMLNISRVTLYRLFKSKTGISPKQYLLN 240 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 R++ A LL + G SV A + F DSF+FS+ FK G +PS Sbjct: 241 YRIEQA-KLLLRMGTSVKNTAASCGFNDSFYFSRVFKEYTGSSPS 284 >UniRef50_C7PCD4 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PCD4_CHIPD Length = 282 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 5/128 (3%) Query: 162 LTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWSVADMAATIPCSEAW 216 L + Q + L+ A G RQ ++K+I LH + S+ D++ Sbjct: 154 LLSVHQQLLSLLQAAGDNAKPGRQLFGGRVDKVIELLHDRWNENISLQDLSTVTALHPVT 213 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 + R F Y + EY R++ +L L++Q S+ E+A FFD HF +AFK + G Sbjct: 214 VSRHFTAYFDCSLGEYMRRIRVEKSLLLVRQHAYSLTEIAYQCGFFDQSHFIRAFKAQTG 273 Query: 277 YAPSAVLK 284 + P A K Sbjct: 274 FLPKAFRK 281 >UniRef50_UPI000178A031 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A031 Length = 260 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 52/101 (51%) Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +I+KL A + + ++ D A + +L +LF TG T KEY R++ A + Sbjct: 160 RIKKLTAFIEEHYAEDLTLNDFAEQLNLHPVYLGKLFKLNTGSTYKEYLQRVRVNNAEIM 219 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 L +V E A+ F+D +FSK FK GY PSA+ ++ Sbjct: 220 LATGNCTVTEAAECCGFYDLSYFSKVFKESKGYPPSAIKRH 260 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P31449 Uncharacterized HTH-type transcriptional regulat... 410 e-113 UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp.... 218 2e-55 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 217 4e-55 UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabac... 217 5e-55 UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales ... 214 3e-54 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 212 8e-54 UniRef50_C7PPV8 Transcriptional regulator, AraC family n=3 Tax=S... 212 9e-54 UniRef50_C6IJ00 Transcriptional regulator n=2 Tax=Bacteroides Re... 212 1e-53 UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides R... 212 1e-53 UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Ta... 211 3e-53 UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=C... 210 6e-53 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 210 6e-53 UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bactero... 210 6e-53 UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto... 210 6e-53 UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=D... 209 1e-52 UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella ori... 208 2e-52 UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales ... 207 3e-52 UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 ... 207 5e-52 UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostri... 206 8e-52 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 205 2e-51 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 204 2e-51 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 203 6e-51 UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=C... 202 1e-50 UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=D... 201 2e-50 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 200 3e-50 UniRef50_C9KYS9 Transcriptional regulator n=7 Tax=Bacteroides Re... 200 4e-50 UniRef50_UPI0001C34C27 transcriptional regulator, AraC family pr... 200 5e-50 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 200 5e-50 UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostri... 200 6e-50 UniRef50_UPI0001788616 transcriptional regulator, AraC family n=... 200 7e-50 UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=C... 199 1e-49 UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=C... 198 2e-49 UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridiu... 197 3e-49 UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=B... 197 3e-49 UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=C... 197 6e-49 UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=P... 196 8e-49 UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=C... 196 9e-49 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 196 1e-48 UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococ... 195 1e-48 UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bactero... 195 1e-48 UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=J... 195 1e-48 UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS fami... 195 2e-48 UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n... 195 2e-48 UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P... 195 2e-48 UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostri... 195 2e-48 UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=L... 195 2e-48 UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon tra... 194 3e-48 UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C... 194 3e-48 UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=S... 193 7e-48 UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1... 193 8e-48 UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostri... 192 9e-48 UniRef50_B8FW52 Transcriptional regulator, AraC family n=2 Tax=D... 192 9e-48 UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=D... 192 1e-47 UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales ... 192 1e-47 UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n... 192 2e-47 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 191 2e-47 UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=La... 191 3e-47 UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=R... 191 3e-47 UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides Re... 190 4e-47 UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=... 190 5e-47 UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales ... 190 7e-47 UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family prot... 189 8e-47 UniRef50_P43465 Raffinose operon transcriptional regulatory prot... 189 8e-47 UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=B... 189 8e-47 UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=P... 189 1e-46 UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus s... 186 7e-46 UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=P... 185 1e-45 UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bactero... 185 1e-45 UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=P... 185 2e-45 UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Ba... 185 2e-45 UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=P... 183 5e-45 UniRef50_A9KKI4 Transcriptional regulator, AraC family n=1 Tax=C... 183 5e-45 UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Or... 183 5e-45 UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pe... 183 7e-45 UniRef50_C6LM61 Putative raffinose operon transcriptional regula... 183 7e-45 UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostri... 182 2e-44 UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=L... 181 2e-44 UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C... 181 2e-44 UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=P... 180 3e-44 UniRef50_C6IY48 AraC family transcriptional regulator n=1 Tax=Pa... 180 5e-44 UniRef50_B0MR70 Putative uncharacterized protein n=1 Tax=Eubacte... 180 5e-44 UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=b... 180 6e-44 UniRef50_C9AKD6 AraC-type DNA-binding domain-containing protein ... 178 2e-43 UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n... 178 3e-43 UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=... 177 3e-43 UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecali... 177 3e-43 UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 T... 177 4e-43 UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostri... 177 5e-43 UniRef50_UPI000196AF05 hypothetical protein CATMIT_01210 n=1 Tax... 177 6e-43 UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostri... 176 7e-43 UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein,... 175 1e-42 UniRef50_C7G8V7 Putative raffinose operon transcriptional regula... 175 1e-42 UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type... 175 2e-42 UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax... 175 2e-42 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 172 1e-41 UniRef50_Q47XU2 Transcriptional regulator, AraC family n=1 Tax=C... 170 4e-41 UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi... 170 8e-41 UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10 Tax=... 169 9e-41 UniRef50_B0N996 Putative uncharacterized protein n=1 Tax=Clostri... 169 9e-41 UniRef50_B9K0A2 Transcriptional regulator AraC family n=18 Tax=R... 169 9e-41 UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=P... 169 1e-40 UniRef50_D1N947 Transcriptional regulator, AraC family n=1 Tax=V... 168 2e-40 UniRef50_A4BIK9 AraC-type DNA-binding domain-containing protein ... 168 3e-40 UniRef50_C4ZBP1 Two-component response regulator n=2 Tax=Clostri... 167 3e-40 UniRef50_C4Z413 AraC family transcriptional regulator, arabinose... 167 4e-40 UniRef50_UPI000174610C response regulator receiver domain protei... 167 5e-40 UniRef50_C4FY02 Putative uncharacterized protein n=1 Tax=Catonel... 167 7e-40 UniRef50_B0NXL6 Putative uncharacterized protein n=1 Tax=Clostri... 166 8e-40 UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopi... 166 9e-40 UniRef50_C7T9S5 Putative transcriptional regulator n=2 Tax=Lacto... 166 9e-40 UniRef50_C1DME1 Transcriptional regulator AraC family n=1 Tax=Az... 165 1e-39 UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-... 165 1e-39 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 165 2e-39 UniRef50_C4DTW1 Transcriptional regulator containing an amidase ... 164 4e-39 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 163 6e-39 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 163 9e-39 UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevi... 162 1e-38 UniRef50_UPI0001788D3A transcriptional regulator, AraC family n=... 161 3e-38 UniRef50_C7MF03 DNA-binding domain-containing protein, AraC-type... 161 3e-38 UniRef50_C5BNS5 Response regulator receiver domain protein n=1 T... 160 4e-38 UniRef50_A5Z7W7 Putative uncharacterized protein n=1 Tax=Eubacte... 160 5e-38 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 160 6e-38 UniRef50_D1N759 Transcriptional regulator, AraC family n=1 Tax=V... 159 8e-38 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 159 1e-37 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 158 2e-37 UniRef50_D1NAQ6 Transcriptional regulator, AraC family n=1 Tax=V... 158 2e-37 UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=V... 157 6e-37 UniRef50_A3YE82 Transcriptional Regulator, AraC family protein n... 156 8e-37 UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumil... 156 1e-36 UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacilla... 156 1e-36 UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1... 155 2e-36 UniRef50_C0ZJ95 Probable transcriptional regulator n=1 Tax=Brevi... 154 4e-36 UniRef50_B4D0H6 Transcriptional regulator, AraC family n=1 Tax=C... 154 4e-36 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 154 4e-36 UniRef50_D1N1W3 Transcriptional regulator, AraC family n=1 Tax=V... 153 5e-36 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 153 5e-36 UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=... 153 6e-36 UniRef50_B4D5Y6 Transcriptional regulator, AraC family n=1 Tax=C... 153 6e-36 UniRef50_C7NB40 Transcriptional regulator, AraC family n=2 Tax=L... 153 7e-36 UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D... 152 1e-35 UniRef50_C0A9I7 AraC-type DNA-binding domain-containing protein-... 152 1e-35 UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=G... 152 1e-35 UniRef50_UPI0001C35596 transcriptional regulator, AraC family pr... 152 1e-35 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 152 2e-35 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 152 2e-35 UniRef50_C0Z8E4 Probable transcriptional regulator n=1 Tax=Brevi... 152 2e-35 UniRef50_B5JCR2 Transcriptional regulator, AraC family protein n... 152 2e-35 Sequences not found previously or not previously below threshold: UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptoco... 194 3e-48 UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=C... 192 1e-47 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 192 1e-47 UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID... 192 1e-47 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 190 4e-47 UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=H... 190 6e-47 UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerot... 189 8e-47 UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostri... 188 2e-46 UniRef50_A6M1I8 Transcriptional regulator, AraC family n=1 Tax=C... 187 4e-46 UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ... 187 5e-46 UniRef50_A6VAM9 Transcriptional regulator, AraC family n=3 Tax=P... 186 1e-45 UniRef50_A1U2J4 Transcriptional regulator, AraC family n=3 Tax=M... 185 1e-45 UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=P... 185 2e-45 UniRef50_C5BZM6 Transcriptional regulator, AraC family n=1 Tax=B... 184 4e-45 UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminoc... 183 5e-45 UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales... 183 5e-45 UniRef50_C7PUR1 Transcriptional regulator, AraC family n=1 Tax=C... 183 6e-45 UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=M... 183 7e-45 UniRef50_A4XS27 Transcriptional regulator, AraC family n=1 Tax=P... 182 1e-44 UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulator... 181 2e-44 UniRef50_C6XV52 Helix-turn-helix-domain containing protein AraC ... 181 2e-44 UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=u... 181 2e-44 UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Ba... 181 3e-44 UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1... 181 3e-44 UniRef50_A5ZSJ3 Putative uncharacterized protein n=4 Tax=Clostri... 179 1e-43 UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1... 178 1e-43 UniRef50_B0MEA0 Putative uncharacterized protein n=1 Tax=Anaeros... 178 2e-43 UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=L... 177 4e-43 UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=P... 177 4e-43 UniRef50_B0MNH5 Putative uncharacterized protein n=1 Tax=Eubacte... 175 2e-42 UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=M... 175 2e-42 UniRef50_P28809 MmsAB operon regulatory protein n=6 Tax=Pseudomo... 175 2e-42 UniRef50_Q5WK33 AraC/XylS family transcriptional regulator n=1 T... 174 3e-42 UniRef50_B8KL56 AraC protein, arabinose-binding/dimerisation n=1... 173 9e-42 UniRef50_Q5WK82 AraC/XylS family transcriptional regulator n=1 T... 172 1e-41 UniRef50_A8YTU0 Msm operon regulatory protein n=3 Tax=Lactobacil... 172 2e-41 UniRef50_UPI00017450D3 transcriptional regulator, AraC family pr... 172 2e-41 UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=L... 172 2e-41 UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=S... 171 2e-41 UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=B... 171 2e-41 UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=P... 170 4e-41 UniRef50_O33813 Lactose operon transcription activator n=4 Tax=S... 170 4e-41 UniRef50_A4AC34 Transcriptional regulator, AraC family protein n... 170 5e-41 UniRef50_C6D787 Transcriptional regulator, AraC family n=1 Tax=P... 170 5e-41 UniRef50_A4XK77 Transcriptional regulator, AraC family n=2 Tax=C... 170 6e-41 UniRef50_A0QZE6 MmsAB operon regulatory protein n=1 Tax=Mycobact... 170 6e-41 UniRef50_B8H8F4 Transcriptional regulator, AraC family n=1 Tax=A... 170 7e-41 UniRef50_A0Y944 Transcriptional regulator, AraC family protein n... 168 2e-40 UniRef50_C0X7J7 AraC family transcriptional regulator n=22 Tax=E... 167 3e-40 UniRef50_C7Q5G1 Transcriptional regulator, AraC family n=1 Tax=C... 167 5e-40 UniRef50_A5ZYS8 Putative uncharacterized protein n=1 Tax=Ruminoc... 166 8e-40 UniRef50_C6CWX0 Transcriptional regulator, AraC family n=1 Tax=P... 165 2e-39 UniRef50_C2EN40 AraC family transcriptional regulator n=2 Tax=La... 165 2e-39 UniRef50_C6D3L8 Transcriptional regulator, AraC family n=1 Tax=P... 164 3e-39 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 163 4e-39 UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivor... 163 6e-39 UniRef50_C8Q370 Transcriptional regulator, AraC family n=1 Tax=P... 163 6e-39 UniRef50_C6IZ62 Transcriptional regulator n=1 Tax=Paenibacillus ... 163 8e-39 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 162 1e-38 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 162 1e-38 UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibr... 161 2e-38 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 161 3e-38 UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=P... 161 3e-38 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 161 4e-38 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 160 7e-38 UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=P... 160 7e-38 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 160 7e-38 UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabin... 159 9e-38 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 158 1e-37 UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D... 158 1e-37 UniRef50_C6D174 Transcriptional regulator, AraC family n=1 Tax=P... 158 1e-37 UniRef50_D2Q7T6 AraC-type transcriptional regulator n=2 Tax=Bifi... 158 2e-37 UniRef50_P07642 Arabinose operon regulatory protein n=160 Tax=Pr... 158 2e-37 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 158 2e-37 UniRef50_Q6PU53 BgaR n=2 Tax=Bacillus megaterium RepID=Q6PU53_BACME 158 2e-37 UniRef50_A4BF96 Arabinose operon regulatory protein n=1 Tax=Rein... 158 3e-37 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 157 4e-37 UniRef50_C6CRB9 Transcriptional regulator, AraC family n=3 Tax=B... 157 6e-37 UniRef50_D1WXI3 Transcriptional regulator, AraC family n=5 Tax=S... 157 7e-37 UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=C... 156 7e-37 UniRef50_C5C2R6 Transcriptional regulator, AraC family n=1 Tax=B... 156 1e-36 UniRef50_C6IZN2 Transcriptional regulator n=1 Tax=Paenibacillus ... 156 1e-36 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 155 1e-36 UniRef50_UPI0001788A2C transcriptional regulator, AraC family n=... 155 1e-36 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 155 2e-36 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 155 2e-36 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 155 2e-36 UniRef50_C6J5K7 Transcriptional regulator (Fragment) n=1 Tax=Pae... 154 3e-36 UniRef50_A6DJ96 Arabinose operon regulatory protein n=1 Tax=Lent... 154 3e-36 UniRef50_C6D447 Transcriptional regulator, AraC family n=1 Tax=P... 153 6e-36 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 153 6e-36 UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=C... 153 7e-36 UniRef50_C7MA05 Response regulator containing CheY-like receiver... 153 8e-36 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 153 1e-35 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 152 1e-35 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 152 1e-35 UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=V... 152 1e-35 UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=P... 152 2e-35 UniRef50_UPI0001788DE5 transcriptional regulator, AraC family n=... 152 2e-35 UniRef50_C6J3G2 Transcriptional regulator n=1 Tax=Paenibacillus ... 152 2e-35 UniRef50_D2Q274 Transcriptional regulator, AraC family n=1 Tax=K... 152 2e-35 UniRef50_C2H081 AraC family transcriptional regulator n=31 Tax=B... 152 2e-35 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 151 2e-35 >UniRef50_P31449 Uncharacterized HTH-type transcriptional regulator yidL n=55 Tax=Enterobacteriaceae RepID=YIDL_ECOLI Length = 297 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 297/297 (100%), Positives = 297/297 (100%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN Sbjct: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM Sbjct: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120 Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD Sbjct: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180 Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL Sbjct: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN Sbjct: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297 >UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EEZ9_9SPHI Length = 306 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 13/270 (4%) Query: 25 NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84 N+++ G ++ Y D H+ ++ D K I + +Y +G G + + + Sbjct: 26 NILNVGHNIHPGKLKYPDPHHPNLYCFDWSKGRILEEYQLIYIAKGSGTFESEQVGSVVV 85 Query: 85 HGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM-----MDIPVGQQSVIYNGEIYNQ 138 H ++ L P H Y + WE+YW+ F + D +I+ G +N Sbjct: 86 HPGTVLLLFPNIWHRYKPHDDEGWEEYWVGFNGSYASYLMQQDCFDPHAPLIHMG--FNS 143 Query: 139 ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-----DPQRRQIEKLIATL 193 E V + + + + Q + L+YA + D + + I + + Sbjct: 144 EFINVFIRLIDTLKFEGVAFAQLSSSLTTQLLGLVYASALQKEKVMDRKEQVINNIRYKI 203 Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253 H +L ++ ++A+ S AW R+ F G +P +Y L+ +L+ A ++++ S+ Sbjct: 204 HENLSNCATLEELASQHNVSYAWFRKTFKEVVGVSPGQYQLNLKLEKAARMIRETQMSIS 263 Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 E+A F HFSK FK K G +PSA Sbjct: 264 EIAFVNGFVSEHHFSKIFKKKMGVSPSAYK 293 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 103/261 (39%), Gaps = 14/261 (5%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101 + + P P + + ++ V G G + G TL + KP + +Y Sbjct: 23 NCGHEYCVPGHTWGPGVRDHYLIHLVVAGKGVYQV-GGVSHTLQEGDLFLAKPNQLITYA 81 Query: 102 CEG-LVWEQYWMEFTPTSMMDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156 + WE YW+ F + P +++ + + + S Sbjct: 82 ADETDPWEYYWVGFNGACANKLVQQTPFSDLHPVHHCKDPQAVREALYNIYLS--RGPEP 139 Query: 157 LAVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLHASLQQRWSVADMAATI 210 A +T +Y ++ + + + + + I + + SV D+A + Sbjct: 140 QCEALMTGYLYIFMAHLMKEARDAMPNVGSSSSQYVLSAIKYIQFNYSHDISVDDIAKAV 199 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 S + L R+F+ G++P +Y + R+ A SLLK S+ E+A ++ FFD F+FS+ Sbjct: 200 GVSRSHLYRVFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRV 259 Query: 271 FKHKFGYAPSAVLKNTDQHPT 291 FK G PS L ++ + Sbjct: 260 FKKVKGVPPSKYLATLEKEQS 280 >UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AB39_9PORP Length = 306 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 127/293 (43%), Gaps = 14/293 (4%) Query: 18 IPLLINENVISS-----GISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72 +P +EN+ G I +Y + + + + + + I + + VY V+G G Sbjct: 14 LPTNNDENIWGMSISGIGFQSIDPKGSYPLKGHPIGYTFNPDRGRIIDEFALVYIVKGEG 73 Query: 73 KILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTP---TSMMDIPVGQQS 128 N + + F+ P HSY + W++Y++ F +++ + + + Sbjct: 74 TFASINCFEKKISKGDAFFIFPGQWHSYQPIANIGWDEYYVTFQGDYFEKLLNGIINRAN 133 Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP----QRR 184 I++ + +Q + E++ A K+ A L I I L+Y+ K + Sbjct: 134 PIFHIGMNDQIVKHFGEMLDCARAQKSGF-QAVLAGITMHTIGLIYSINKNQDYGSVSMQ 192 Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +I++ + ++ +++ D+A +I S + R+ F +YTG P +Y L +L L Sbjct: 193 KIQEACVLMRENIYDKFTPEDIAESINMSYSNFRKSFKQYTGIAPHQYMLQLKLSKIKDL 252 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297 L S+ ++A LNF + +FS F+ K G P + K ++ A ++ Sbjct: 253 LSSTEMSIQDIAMKLNFESADYFSYFFRSKTGINPLSYRKEIEKQREKAKKNS 305 >UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales RepID=A6LBM0_PARD8 Length = 295 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 114/272 (41%), Gaps = 11/272 (4%) Query: 26 VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85 V + G I Y + + + I N + VY +G G ++ + ++ Sbjct: 25 VTTVGYQFIPPGCAYPLSRHPEKYNFKPQTGRILNEYQLVYITKGSGYFSSQSCKSQKIN 84 Query: 86 GNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTE-- 142 +I L P + HSY+ + W++YW+ F + D V ++ ++ L+ Sbjct: 85 AGTMILLFPGEWHSYYPDRETGWDEYWVGFRGIHI-DKRVEKKFFTKEEPLHRIGLSATI 143 Query: 143 --VAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR-----QIEKLIATLHA 195 + E I + + + ++ I+ + +Y K + +I + + Sbjct: 144 VGLYEDILKFASEEKSGYQQMISSIVLHILGSVYYKEKNNSFTNTYVVDKINEARILMKE 203 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 +++ S ++AA + +W RR+F YTG +P +Y L +L A LL ++ E+ Sbjct: 204 NIEDPLSPEEIAARLGLGYSWFRRMFKEYTGVSPAQYQLQQKLLRAKELLTSTPLTISEI 263 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 A +L+F ++ FS FK K G PS T Sbjct: 264 AYSLHFENAGQFSTFFKKKEGVTPSEFRDRTH 295 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 98/249 (39%), Gaps = 12/249 (4%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LV 106 P P + + + + G G + ++ GE L G P + Y + Sbjct: 29 CAPLHSFGPGVRDIYKIHFIHSGRGIVKVE-GETFELTGGQAFLAYPERVIFYQADEVDP 87 Query: 107 WEQYWMEFTPTSMMDIP-----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161 W W+ F + +I V+ +L E+ ++ Sbjct: 88 WTYSWIGFNGEQVAEILSRTRLTPASPVLPMDTHLMPQLYELLNEAEESNTTRDLRLQTL 147 Query: 162 LTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWSVADMAATIPCSEAW 216 L + + + L+ A G D R Q I + + LH+ + SV +AA + + Sbjct: 148 LYEFMTLLVELVPASGDADSTRTQAKDAYIHRCLDFLHSHYSEEMSVGQLAAIVGLDRKY 207 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 L LF R TG P++Y L R++ A +LL+ S+ EVA ++ + D+ FSK FK G Sbjct: 208 LSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQDALLFSKMFKKTVG 267 Query: 277 YAPSAVLKN 285 +PS + Sbjct: 268 TSPSDYREQ 276 >UniRef50_C7PPV8 Transcriptional regulator, AraC family n=3 Tax=Sphingobacteriales RepID=C7PPV8_CHIPD Length = 306 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 15/293 (5%) Query: 3 GKLQSSD-VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWP-RDKKKPLIAN 60 G L+ D + E ++P + +N I L L+ T+ R + RD++K I N Sbjct: 2 GTLKRRDGFEGEQLISLPESVWKNAIKINPVLGQLYITHIGYFPRAAFHYRDREKGCIDN 61 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGL-VWEQYWMEFTPTS 118 + +Y G G + + + N + + + Y + W YW+ FT Sbjct: 62 --ILIYCTHGKGWYSIDD-RTFKVGMNEYVIIPATELPLRYGSDDENPWSIYWVHFTGKD 118 Query: 119 MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI------KNNLAVA--FLTKIIYQWI 170 M G +Y+G + + +L + K+NL A L + ++ Sbjct: 119 MAAFNQGFNIGLYDGPRHIHRNEKGIQLWNTMFQCLKMGFGKDNLGKANLHLYHFLATFL 178 Query: 171 CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 +++ R +I + I + L +V ++A + S + LF + TG +P Sbjct: 179 FPDKTPREQEQSRDRINETILYMQQHLTVALTVEELAQLVELSPSHFSTLFKKTTGMSPL 238 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 Y++ +L A LL + +V + + D +HFS+ FK +P Sbjct: 239 NYFIHLKLQQACLLLYTTDMKIKQVGVAIGYDDPYHFSRLFKKSMHVSPEHYR 291 >UniRef50_C6IJ00 Transcriptional regulator n=2 Tax=Bacteroides RepID=C6IJ00_9BACE Length = 293 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 107/275 (38%), Gaps = 11/275 (4%) Query: 23 NENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82 + N+ S G I +Y ++ + + K I + +Y +G G + ++G Sbjct: 18 DRNISSVGFEEIPPNTSYPTLNHSAGYYFNPDKGRILTEYQLIYITEGEGVLETRSGGVF 77 Query: 83 TLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYN 137 T+ I L P + H+Y+ W YW+ F M + ++S ++ I N Sbjct: 78 TIKRGMIFVLFPGEWHTYYPNYQTGWSHYWIGFCGPEVDSWMTNEYCSKESPVFKVGI-N 136 Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-----DPQRRQIEKLIAT 192 E+ + + L L+ ++ + LM + K D +I+ Sbjct: 137 DEIVSLFRKAIDVANEEPTLYQRVLSGLVTYLVALMCSIDKNLQVENDDFSSKIDYACVL 196 Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 + + Q S+ ++A + R+LF P +Y+ + ++ A+ LL V Sbjct: 197 MKELIDQPVSMQEIAKKAGMGYSLFRKLFKEQKNYAPVQYFQNLKIQKAIELLTTTTIPV 256 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 E+A L+F +FS FK + G +P + Sbjct: 257 KEIAYRLDFESPAYFSARFKKQTGKSPIEYREEFR 291 >UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides RepID=A6KXZ8_BACV8 Length = 306 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 118/293 (40%), Gaps = 11/293 (3%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 M+ Q +D K +V + G I Y ++ + +K + + Sbjct: 1 MHYNDQGADFKYLIVNERDKRFGLSVTTVGFQAIRAGSVYPPRNHPDAYYFTAQKGRVLH 60 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM 119 + VY +G G + + I+FL P H+Y + W +Y++ F + Sbjct: 61 EYQLVYITKGRGTFASDTTPSVDISKGQILFLFPGQWHTYAPLQKTGWNEYYIGFEGPII 120 Query: 120 MDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 ++ + ++S I + I N+EL + A +L+ I+ + + A Sbjct: 121 DNLVKNSFISKESQILDIGI-NEELASLFARALEVAEADKTAAQQYLSGIVLHIMGAVLA 179 Query: 176 DGKK-----DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 + D ++IE +H ++ + ++A + S +W R++F YTG P Sbjct: 180 ISQNKRYEVDNAAQKIESAKIIMHENVYKDIDPEELAMKLGISYSWFRKVFKEYTGYAPA 239 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 +Y+ + +L A LL + SV E+ LN+ + HF FK + + P+ Sbjct: 240 KYFQELKLRKAKQLLIESSMSVKEICYELNYTSTEHFFSVFKKRTNFTPTEYR 292 >UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969580 Length = 304 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 11/266 (4%) Query: 28 SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGN 87 + G LI Y + + +K I N + +Y + G G + N +++ +H Sbjct: 25 TVGHQLIKPNSVYPSASHPFHYLFSPEKGRILNEYQLIYILDGKGTFVSMNKKKMQIHSG 84 Query: 88 CIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTE-VAE 145 +I L P + HSY + W +YW+ F + + V + I+N L E V + Sbjct: 85 HMILLFPGEWHSYKPDKETGWYEYWIGFNGQDIEKL-VEVDFFRKDNPIFNIGLNENVIQ 143 Query: 146 LITSPEAIKNNLAVAF---LTKIIYQWICLMYADGKKDP-----QRRQIEKLIATLHASL 197 L + F L I++ + Y++ K++ QI + + Sbjct: 144 LYKQAANVAQEQTTGFQQILAGIVHLLLGYTYSEHKQNSFINMNVLDQINTAKHLIAENY 203 Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257 + + D+A I S + R++F +YTG +P Y + RL + LL + E+A Sbjct: 204 KTEITPKDIATKINMSYSCFRKVFKQYTGFSPSRYKEELRLQTSKELLANTTMTSQEIAF 263 Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVL 283 + F ++F FK + GY+P Sbjct: 264 EVGFDTPYYFCILFKKRTGYSPLEYR 289 >UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=A9KN44_CLOPH Length = 278 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 14/251 (5%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 Y+ P + P + + ++ Y V G G N + L + + P +Y+ + Sbjct: 27 GYQRCEPNYQWGPGVRDHYLIHYIVSGKGYYET-NHKTFPLTSGDVFLIYPDTQVTYYAD 85 Query: 104 G-LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158 WE YW+ F+ + I +S + + Y +++ + +L EA N A Sbjct: 86 ALDPWEYYWVGFSGSDAGLILEATDFSNESPVISSCSYGEKVKD--QLYQIYEARGNEFA 143 Query: 159 VAF-LTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWSVADMAATIPC 212 A + +Y + L + ++ ++K I + + ++ D+AA + Sbjct: 144 NAVAMAGQLYITLSLFLSGASNHNKKHHQNLDYVQKGITYMESHFSYPITIDDVAAYVGI 203 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 S + L R F + GK+PKEY + R+ + +LLK S+G +A ++ + + ++SK F+ Sbjct: 204 SRSHLFREFKAHLGKSPKEYLSEYRIKYSCTLLKNTDLSIGAIATSVGYDNGLYYSKVFQ 263 Query: 273 HKFGYAPSAVL 283 G PS Sbjct: 264 SVKGMPPSKYR 274 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 23/289 (7%) Query: 10 VKNETPYNIP----LLINENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVA 64 NE IP L I EN ++ + + ++ A+ HYR R + P + Sbjct: 8 FPNEKAIVIPQENLLRIKENPMTRLLHPTDVGYYPCAEGHYR---ERTEGSP----QHIL 60 Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIP 123 +Y +G G + G+ T+ N ++ H Y W YW+ FT Sbjct: 61 IYCHEGEGWYNIGKGK-CTVKKNDFFIIEAGTPHVYAASTSHPWSIYWIHFTGEQSHLFS 119 Query: 124 VGQQSVIYNGE----IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-----MY 174 IY + +N + E++ + E + + ++T ++ + + Sbjct: 120 ELFNRTIYIDDSPTARFNDRIQLFNEILVNLEMGYSIENLEYITLCLWYLLGSFRYIPQF 179 Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 + K + I+K+I + A+L ++ ++ DMA ++ S +L LF + +G +P Y+ Sbjct: 180 REINKPKTQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSGMSPINYFN 239 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 ++ A LL E+A L F D ++FSK F +P Sbjct: 240 QLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSPKEYR 288 >UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C7N6_9BACE Length = 292 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 127/283 (44%), Gaps = 19/283 (6%) Query: 14 TPYNIPLLINENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72 TPYNI L EN I+ + + + ++ +A+ H+ R+++K N V +Y GCG Sbjct: 16 TPYNIRNLQRENNITKQLFVSHIGYYPHAENHF-----REREKGT--NENVFIYCESGCG 68 Query: 73 KILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT--SMMDIPVGQQSV 129 + K GE+ L N L + H+Y + + W YW+ F +M +G+ Sbjct: 69 WVSYK-GEKYILTKNQAFILPANEQHAYGADEVNPWSIYWLHFCGEGVAMFSSIIGKAIS 127 Query: 130 IYNGEI--YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM-----YADGKKDPQ 182 + + Y+ E+ + E + + +++ + ++ + + + KK + Sbjct: 128 LEESDKSRYDDRFQLFEEMYQNLEMGYSPENLEYVSFCLMHFLASLKYINQFREIKKVRE 187 Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242 I+K I+ + +++ + ++ D+A + S + LF T P EYY ++ A Sbjct: 188 TDFIQKSISFMKENMENKITLEDIAQHVGYSASHFSALFSERTSYAPMEYYNQLKIQRAC 247 Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 S L+ + E+A L ++D FHFSKAF + P + Sbjct: 248 SFLQFSDLKIKEIAFRLGYYDQFHFSKAFNKEMEITPKEYRRR 290 >UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE Length = 288 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 111/259 (42%), Gaps = 14/259 (5%) Query: 43 EHY--RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100 +HY + P + +++V + V G GK + +G L + L + Y Sbjct: 31 DHYGAEICAKNYSFGPTVRDNYVLHFIVDGKGKFTI-DGITTQLKTGDMFILPKGKVAFY 89 Query: 101 HCEGL-VWEQYWMEFTPTSMMDIPVGQQSV---IYNGEIYNQELTEVAELITSPEAIKNN 156 +G W W+ F+ + +I Q + + + ++ L ++ +L + ++ Sbjct: 90 QADGEHPWTYLWVGFSGSKAENILSKTQLLDHYFCHSTLESKVLDQIVKLTQFRDQKLDD 149 Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIATLHASLQQRWSVADMAAT 209 + LT +Y+ + + + + I+++ +H ++++A Sbjct: 150 VTELQLTAELYKLLAFLMKEFPSKAMSDSSILIQNYIKQVKKIIHTQYGNPLKISEIAKK 209 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 + + ++L ++F T + K+Y + R++ + LL + + E+A+ + F D+ FSK Sbjct: 210 LNLNRSYLYKIFKEETDYSLKDYLIQIRMEKSADLLTRTTFHISEIANAVGFPDALAFSK 269 Query: 270 AFKHKFGYAPSAVLKNTDQ 288 AFK FG +PS K + Sbjct: 270 AFKKHFGQSPSHYRKALKK 288 >UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VZN4_DYAFD Length = 292 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 9/270 (3%) Query: 25 NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84 + ++G S + Y +E + + I N + ++ +G G +N + Sbjct: 21 YLTTAGYSKVEPNQQYPNEPHPDSHKLTWNRGRILNDYYIIFITRGKGIFEAENLPPTEV 80 Query: 85 HGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPT---SMMDIPVGQQSVIYNGEIYNQEL 140 FL P H Y + WE+YW+ F +M+ + + N+E+ Sbjct: 81 SAGQCFFLFPGVWHRYKPDVKSGWEEYWLGFNGYYIRQLMNNLNFHPARPFVDIKSNKEI 140 Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK-----KDPQRRQIEKLIATLHA 195 + I N + I Q + ++ K DP R I K L Sbjct: 141 LVLLHRIFDRLKAANLGYHQQIAGITLQILGILNTISKFKDYDNDPVGRLIAKAEFILQE 200 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 S +++ V ++A+ +P + R+ F + TG +P +Y+L+ RL A LL ++ E+ Sbjct: 201 SYEKQVDVEELASQLPMGYSAFRKAFKKITGVSPNQYHLNLRLSRARDLLINTNLNISEI 260 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 F F+FSK FK K G +P A + Sbjct: 261 THQTGFESVFYFSKLFKKKNGLSPVAFRRR 290 >UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella oris F0302 RepID=D1QQ68_9BACT Length = 291 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 104/273 (38%), Gaps = 12/273 (4%) Query: 26 VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85 V + G I Y + + ++ I N + +Y G G + E+ + Sbjct: 20 VSTVGYEHIIPGEDYPTHGHADGYYFKVERGRILNEYQLLYITAGEGVFKSSSVEERRIK 79 Query: 86 GNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM----MDIPVGQQSVIYNGEIYNQEL 140 L P + H+YH + + W+ YW+ F +M + + +Y+ Y L Sbjct: 80 AGDFFLLFPGEWHTYHPSKNIGWQSYWIGFKGENMDARVKNGFLSPTKPVYHVG-YMDRL 138 Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD------GKKDPQRRQIEKLIATLH 194 ++ + L ++ I +MY+ GK + + + Sbjct: 139 EDLYHYALDTAQEEAVHTQRTLAGVVNLLIGMMYSLERNIELGKNQEHVNMVNRARKRIR 198 Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254 +L++ ++ +A + S + R+LF +TG +P Y + RL A LL SV + Sbjct: 199 EALEENLTIQQIATDMGVSYSNFRKLFKEFTGVSPALYQQELRLQRAKELLSTTNLSVKQ 258 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +A L F +FS FK K PS + T Sbjct: 259 IAYKLCFDSPDYFSAKFKAKINLRPSEFREQTK 291 >UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales RepID=D1PEF6_9BACT Length = 291 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 109/273 (39%), Gaps = 12/273 (4%) Query: 26 VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85 + + G I+ Y + + + D +K I + + +Y +G G + + + Sbjct: 20 ISTVGREEIAPGEAYPTKGHADGYYFDLQKGRILDEYQLLYQPEGEGVFCSAHLPETKIK 79 Query: 86 GNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMD----IPVGQQSVIYNGEIYNQEL 140 I L P + HSYH G W+ YW+ F ++ D + + IY+ Y+ E+ Sbjct: 80 AGDIFLLFPGEWHSYHPSGTKGWKSYWIGFKGKNIDDRVKAGFLSPEKPIYHVG-YSNEI 138 Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLH 194 + E + A + I+ I MY+ + I K + Sbjct: 139 IALYEEAYKTAQEEVAFAQQTMAGIVNHLIGKMYSLERNIVLSKDTKHVDMINKARLRIR 198 Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254 SL+ ++ ++A + S + R+LF +TG P Y + +L A LL S+ E Sbjct: 199 ESLEDTLTIQEIAQELGISYSSFRKLFKEHTGFAPALYQQNLKLQRAKELLSTTDESIKE 258 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +A LNF +FS FK + G PS T Sbjct: 259 IAYRLNFESPDYFSAKFKIQTGMKPSDFRNMTR 291 >UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XZD9_PEDHD Length = 294 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 10/269 (3%) Query: 26 VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85 V+++G + IS Y + + K I + + +Y +G G + +Q+ ++ Sbjct: 21 VLNAGYNRISKAANYPPAGHPSGHYFNWDKGRILDEYQLIYISKGTGIFESAHCKQLHIN 80 Query: 86 GNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTSMMDIPVGQQSVIYNGEI---YNQELT 141 +I L P + H + + W++YW+ F + +I + + + +L Sbjct: 81 EGAVILLFPGEWHRFKPDPETGWDEYWVGFKGDIISNIAKKNFISPHLPLLQVGLSDQLI 140 Query: 142 EVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ------IEKLIATLHA 195 ++ I + ++ +I + +YA K ++ I K L Sbjct: 141 DLFSAILEKTKTEQPGYQPLISGMILHLLGEVYAKTKLQALEKEDISEILINKARILLRE 200 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 S+ ++ +A + S +W R+ F +TG P +Y L +++ A +LL + E+ Sbjct: 201 SVHTNIAIEKLAEELHVSYSWFRKAFKTFTGIAPHQYLLQLKIEKAKTLLSDSTKPIKEI 260 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 A L F SF+FS+ FK+K YAP K Sbjct: 261 AFELGFESSFYFSRIFKNKTSYAPDTYRK 289 >UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVL0_9CLOT Length = 282 Score = 206 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 9/257 (3%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101 + ++ P P + + ++ Y G G +G+ +L + P + +Y Sbjct: 27 NCGFQRCSPGHTWGPAVRDHFLIHYITSGKGVYDSGSGK-YSLSAGDGFLVVPNRLITYW 85 Query: 102 CE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGE---IYNQELTEVAELITSPEAI 153 + WE YW+ F T + + + I++ + +Y ++L + L + + Sbjct: 86 ADQSDPWEYYWVGFNGTDAERLVCEAGLSAEQPIFHYDKDSLYREKLLNIYRLNGNRPSD 145 Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 + + L+ + +K ++K + + + + V D+AA + S Sbjct: 146 QARMQAGLLSFMAAMMDRRPLDIQEKKSGYEYVKKSLQFIDYNYSRSIDVDDIAANVGIS 205 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 + L RLF+++ P EY R+ A LL+ SVGE A + F D +FS+ FK Sbjct: 206 RSHLYRLFMKHISVPPNEYLTRYRIQKASLLLESSNLSVGEAAYSTGFSDQLYFSRVFKK 265 Query: 274 KFGYAPSAVLKNTDQHP 290 G +PS K + + Sbjct: 266 YKGLSPSQYSKRSHEKK 282 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 99/257 (38%), Gaps = 11/257 (4%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-V 106 P P I + ++ V G G + G + + F +P + Y + Sbjct: 29 CAPGQTWGPGIRDHYLIHLVVSGKGIFEV-GGRTWEVSEGDLFFARPSQLIRYTADEQQP 87 Query: 107 WEQYWMEFTPTSM----MDIPVGQQSVIYNGEIYNQELTEVAELITSP--EAIKNNLAVA 160 WE W+ F +P + +++ + + + +S + V Sbjct: 88 WEYSWVGFNGACAHKLAAQLPFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQDEAAMVG 147 Query: 161 FLTKIIYQWICLMYAD--GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218 +L I + A + + I + + S+ D+A ++ S + L Sbjct: 148 YLYLFIAALMRETSAGKPHTASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGVSRSHLY 207 Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278 R+F+ GK+P +Y + R++ A LL+ S+ EVA ++ FFD F+FS+ FK G Sbjct: 208 RVFMLNVGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGVP 267 Query: 279 PSAVLKNTDQHPTDASP 295 PS Q ASP Sbjct: 268 PSKYF-AAQQDADPASP 283 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 102/260 (39%), Gaps = 18/260 (6%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE----QITLHGNCIIFLKPMDIHS 99 + P P N ++ Y + G G ++ N + + + P I++ Sbjct: 23 GHEQCEPGHSFGPATRNHYLFHYVLSGTGTLMADNAKGITQTYNIKSGQGFLIFPGQINT 82 Query: 100 YHCEG-LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIK 154 Y + L WE W+EF + + + + + +Y+ + V E++ Sbjct: 83 YIADDKLPWEYIWIEFDGLRVKEALTTTELTKNNPVYHTHSKDIREKLVEEMLYITRHPS 142 Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDP-------QRRQIEKLIATLHASLQQRWSVADMA 207 + L +Y ++ + K I++ + + + Q S+ D+A Sbjct: 143 ESPY--HLIGHMYLFLDYLMQSAKSSKLVPGGKMSDFYIKEAMNYIEQNFQNDISIEDIA 200 Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267 + ++L ++F G +P+E+ ++ R+ A LLK S+ +V + + + HF Sbjct: 201 GVCGINRSYLGKIFKNSVGHSPQEFLMNYRMIKATELLKLTSLSIADVGSAVGYENQLHF 260 Query: 268 SKAFKHKFGYAPSAVLKNTD 287 S+AFK+ +G AP Sbjct: 261 SRAFKNIYGVAPREWRNEHK 280 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 11/249 (4%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 ++ + P I + ++ Y + G G+ + NG TL + P Y + Sbjct: 25 GFQSCDSLYQWGPGIRDHYLIHYIISGKGRYTV-NGSVHTLTPGDAFLVYPNTEVIYQAD 83 Query: 104 G-LVWEQYWMEFTPTSMMDIPVGQQ--------SVIYNGEIYNQELTEVAELITSPEAIK 154 WE W+ FT + I + NG ++L + + E Sbjct: 84 AQDPWEYTWVGFTGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYDA-RGTEFEN 142 Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 L + ++ + ++ ++K I + A+ +V D+A+ I S Sbjct: 143 ALEMTGRLYTTLALFVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIGLSR 202 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 + L R F G +PKEY D R+ A LLK S+ +A ++ F +S +FSK F Sbjct: 203 SHLFRSFQSILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKI 262 Query: 275 FGYAPSAVL 283 G +P Sbjct: 263 KGLSPKEYR 271 >UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1T1_CLOCE Length = 265 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 121/278 (43%), Gaps = 21/278 (7%) Query: 16 YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75 +NIPLL LI W + H+ P ++ Y V G G Sbjct: 2 HNIPLL--NKGFEEVNPLICGWQSCDKGHFF--------GPASREYYLIHYVVSGSGVFE 51 Query: 76 LKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGE 134 + G++ L +C+ ++P ++ Y + WE W+ F + + D+ ++ ++ + Sbjct: 52 -RAGKRYPLSKDCLFLIRPYELTFYKADKENPWEYIWIGFDGSLVPDLL---KNSGFSDD 107 Query: 135 IYNQELTEVAELITSPEAIKN--NLAVAFLTKIIYQWICLMYADGKKDPQRRQI----EK 188 I + ++ S + ++N + + FL I++ + + P+ ++ Sbjct: 108 ICTMHIPSLSTTFLSMKEVENLQHSSEIFLCGKIFEMFSYLSEEFSPTPKGSTTSVYCKR 167 Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 + ++ SV +A + +L R+F +YTG TP+ + ++ RL+ A LL + Sbjct: 168 AKDYIMSNYANHISVESIANMLGIDRRYLCRIFYKYTGSTPQNFIVNYRLEKAAFLLSKH 227 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 G +V E + + D ++FSK FK K+G PS ++ Sbjct: 228 GYTVAEAGRSTGYDDIYNFSKMFKKKYGVPPSRYKNDS 265 >UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VUW2_DYAFD Length = 300 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 120/295 (40%), Gaps = 14/295 (4%) Query: 1 MNGKLQSSD-VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIA 59 M+ + D E ++P I ++V +L ++ T+ + ++ +++ Sbjct: 1 MSNVFRRRDGFDGEKLISLPPGILKDVAQRNPALFQIYITHIGYFPKALFHY-RERRKGC 59 Query: 60 NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH-SYHCE-GLVWEQYWMEFTPT 117 + +Y +QG G ++ + ++ + N I L D + Y + W YW+ FT Sbjct: 60 EDNILIYCIQGKGHYVIGD-KKFEVSANQFILLPATDQYIRYWADHDDPWTIYWVHFTGA 118 Query: 118 SMMDIPVGQQSVIYNGEI---YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY 174 + + Q G + +N++ ++ I + +L + + M+ Sbjct: 119 GIDNFNQSLQIAPQKGPVDILFNEKTLDIWHRIYQSLEMGYSLENLANATMCLHYFTAMF 178 Query: 175 ADGKKD------PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 +K + I + I + +L Q+ SV DMA S + LF + TG Sbjct: 179 LFPEKHLTTEGTEKTDLITETITHMRLNLDQKLSVEDMARQHQLSCSHFSMLFRKGTGMA 238 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 P +Y++ ++ A L+ + E+A +L + D F+FS+ FK G +P Sbjct: 239 PVDYFIHLKMQKACQLIYANEGKIKEIAMSLGYDDPFYFSRVFKKNMGQSPEQYK 293 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 93/243 (38%), Gaps = 13/243 (5%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYW 111 K P + S+V +G G + G+ L ++P + Y + W W Sbjct: 67 KFGPYVRESYVIHIVKKGKGVFTI-GGKSYELEAGQAFIIRPGEETIYKADDDDPWSYMW 125 Query: 112 MEFTPTSMMDIPVG----QQSVIYNGEIYN------QELTEVAELITSPEAIKNNLAVAF 161 + F D + S I E + + E +++ E + + + Sbjct: 126 VGFHGYRAEDFIESMGYKKDSPIIKIEQMDTCATCINNMLEYSQITRINEVKRQSALMML 185 Query: 162 LTKIIYQWIC-LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 I+ D + P + ++ + + + + D+A I S + L Sbjct: 186 FATIMEDNTSGQQENDNVEYPSKIYVKAAVDFITEKYMNKIKIDDIADFIGISRSHLTGS 245 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 F + G +P+EY ++ RL+ A SLL+ + +A + DS FSKAFK KFG +P Sbjct: 246 FKKEMGVSPQEYLINFRLEKAASLLRSSKEQINIIAYQCGYEDSLSFSKAFKQKFGMSPK 305 Query: 281 AVL 283 + Sbjct: 306 SFR 308 >UniRef50_C9KYS9 Transcriptional regulator n=7 Tax=Bacteroides RepID=C9KYS9_9BACE Length = 312 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 11/266 (4%) Query: 28 SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGN 87 + G I Y + + + + +K + + VY +G G + + + Sbjct: 42 TVGYQSIPPDSPYPLKEHPSGYFFNAEKGRVLREYQLVYITKGRGLFSSDSTPEKQVCKG 101 Query: 88 CIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTE 142 ++ L P H+Y W +Y++ F + + + + Q+ I I N+EL Sbjct: 102 RLMVLFPGQWHTYRPLRQTGWTEYYIGFEGPAIDAIVANSFLSQEQQILEVGI-NEELVS 160 Query: 143 VAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-----DPQRRQIEKLIATLHASL 197 + + A +L+ I+ I ++ + K ++IE+ ++ ++ Sbjct: 161 LFSRALAVAEADKISAQQYLSGIVLHIIGMILSISKNKVFEMSDVDQKIEQAKIIMNENV 220 Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257 ++A + S +W RR+F YTG P +Y+ + +L A LL SV E++ Sbjct: 221 SGNVDPEELAMRLNISYSWFRRVFKEYTGYAPAKYFQELKLRKAKQLLVGTSQSVKEISF 280 Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVL 283 L F + +F FK + G P Sbjct: 281 FLGFQSTEYFFSFFKKRTGLTPLEYR 306 >UniRef50_UPI0001C34C27 transcriptional regulator, AraC family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34C27 Length = 262 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 107/256 (41%), Gaps = 13/256 (5%) Query: 37 WHTY--ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94 WH D + P P W+ Y +QG G + G++ + + ++P Sbjct: 12 WHDINPVDCGWEACAPGHSFGPAARFYWLLHYVIQGRGAFTAE-GKESPVRAGQMFVIRP 70 Query: 95 MDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI 153 ++ Y + WE W+ FT + + Q++V+ + + E Sbjct: 71 FEVTYYEADRREPWEYIWIGFTCGIPLPECLLQEAVVNASRC-----GSIFSSMLEAENQ 125 Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 + + FL +Q + + + K +E+ L A+ + S+ ++A + + Sbjct: 126 TDGREL-FLCGKAFQLLAAL--EEKPAGGEDYVEQARTYLEANYMRDVSIGELAGKLNLN 182 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 ++ LF + TGK+P++Y D R+ A L+ + G S G+ A + + D F FS+ FK Sbjct: 183 RSYFSTLFRKKTGKSPQQYLTDYRMGRACQLMTEHGYSPGKAALSTGYPDIFSFSRMFKK 242 Query: 274 KFGYAPSAV-LKNTDQ 288 FG P + T++ Sbjct: 243 HFGVFPREYSRRQTEK 258 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 18/262 (6%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE----QITLHGNCIIFLKPMDI 97 + P P N ++ Y + G G ++ + + + + P + Sbjct: 21 QYGWEQCEPLHSYGPYARNHYLFHYVISGAGTLMSTDSKGMTNTYHIKSGEGFLIHPKQV 80 Query: 98 HSYHCE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNG-------EIYNQELTEVAE 145 ++Y + WE W+EF + + + + +Y+ E+ N+ L Sbjct: 81 NTYSADRDHPWEYTWLEFDGLRVKEALELAGLTMDNPVYHSNARDLSLELKNEMLYIANH 140 Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVAD 205 SP + +L + FL + G K Q I + + + + Q SV D Sbjct: 141 SDQSPFHLIGHLYL-FLDYLTRSSSSRRMMRGGKL-QDFYIREATSFIEQNFQNDISVED 198 Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265 +AA + ++ ++F GK+P+E+ + R+ A LLK ++ ++ + + + Sbjct: 199 IAAFCNLNRSYFGKIFRDAVGKSPQEFLISYRMTKAAELLKLTELTIKDIGNAVGYPSQL 258 Query: 266 HFSKAFKHKFGYAPSAVLKNTD 287 HFS+AFK +G +P Sbjct: 259 HFSRAFKKTYGISPREWRSENK 280 >UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGA4_EUBSP Length = 295 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 115/288 (39%), Gaps = 9/288 (3%) Query: 2 NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61 N ++ K+E IP N L+ + + +++ A Sbjct: 3 NNIGKADGFKDEKYIIIPTESFANYAE--HPLVRTVYPTDVGFFPKARDHYRERKEGAEQ 60 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMM 120 ++ +Y +G G I ++ GE + + + H Y+ + W W+ F + Sbjct: 61 YILIYCTEGKGTIEVE-GEVFEMRKSGAFCIPCKKGHRYYADAKDPWSILWVHFKGENTA 119 Query: 121 DIPVGQQSVIYNGEIYNQ-----ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 P+ + V+ ++ + ++ + N + ++ + +I + Sbjct: 120 YFPIDEPHVVPMNSRHSDNRMMVLFNLLFRVLRRNYTLGNFIYISQVLSLILSEVYYREK 179 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 + Q R + +I ++ +L + ++ +++ + S ++L +F TG++P E+++ Sbjct: 180 VDESSVQDRHVTMVIRFMYENLTRSLTLEEISEEVQLSRSYLNTIFKNQTGRSPVEFFIH 239 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 ++ A LLK + EV+ L + D ++FS+ FK G +P Sbjct: 240 LKMQEACKLLKNTNLYIYEVSSRLGYEDQYYFSRIFKKVVGVSPKDYK 287 >UniRef50_UPI0001788616 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788616 Length = 297 Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 112/294 (38%), Gaps = 13/294 (4%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 M+ + +++ +P I + + SL+ H ++ +++P + Sbjct: 1 MDTIRKPDGFESQKIIVLPDHIMKEA--ARHSLVEPLHVTDVGYFPRALHHYRERPEGSG 58 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPTSM 119 +++ +Y +G G L G+ +L + + P H Y E W YW T Sbjct: 59 AYILIYCAEGEGWYRLNGGKTYSLLKGQAVVIPPDTPHEYASSEFHPWSIYWWHMKGTHA 118 Query: 120 MDIPVGQQS-------VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK---IIYQW 169 + G + + E EL+ + + + V+ L I + Sbjct: 119 GLLFEGFTGAAEPAIVPVDQSRSIVELFQESYELLQKGYTLNHIIHVSQLAGHLAAIIRL 178 Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229 L G+ + +E+ + + L+ S+ ++AA S F TG +P Sbjct: 179 ARLQPQRGQHQHNKHDMEQTLRFMTEHLEGHVSLKELAAYANLSIPHFTFRFKEATGYSP 238 Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 +YYL ++ A L G SV E++ L F D ++FS+ FK G +PS Sbjct: 239 IDYYLRLKIQRACQHLDLTGESVKEISHRLGFQDPYYFSRLFKKIMGKSPSEYR 292 >UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=Clostridium perfringens RepID=B1BNT9_CLOPE Length = 285 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 19/253 (7%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKN-----GEQITLHGNCIIFLKPMDIHSYHC 102 P P + N+++ Y + G GK + + + + P +I SY Sbjct: 27 CDPLHSVGPTVKNNYLFHYVISGKGKFFSVDPKTFEKKYYEVSPGEGFLICPNEICSYQS 86 Query: 103 E-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 + W W+EF M + + + I+ + L + E+ + K N Sbjct: 87 DENDPWHYMWIEFNGIKAKLYMEEAGLTPANPIFKLKESINSLKIIEEMKSIISNNKKNP 146 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRR-------QIEKLIATLHASLQQRWSVADMAATI 210 +FL +Y +I + I + + + + + SV D++ Sbjct: 147 --SFLIGHLYLFINSLIEFSLNSTLNELDTLNELYIREALNFIEENYNRNISVEDVSNRC 204 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 S+++ R+F ++ TP+E+ + ++ A +LLK + S+ +VA+ L + + F+FS A Sbjct: 205 NLSKSYFTRIFKKHMNTTPQEFLIQYKMLQACNLLKDKSLSISQVAELLGYSNQFNFSVA 264 Query: 271 FKHKFGYAPSAVL 283 FK KF +PS Sbjct: 265 FKKKFNLSPSKWR 277 >UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1S5_CLOB8 Length = 286 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 102/258 (39%), Gaps = 19/258 (7%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQ------ITLHGNCIIFLKPMDIHSYH 101 P P + N ++ Y + G G++ N T+ L P I++Y Sbjct: 27 CDPLHSFGPTVKNHFLFHYVLSGKGRLYSFNKGTQNDSSIYTIKAGEGFLLTPNIINTYE 86 Query: 102 CE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAE----LITSPEA 152 + W W+EF + +I + +++I+ + YN + + + L+ +P A Sbjct: 87 ADKDDPWNYVWVEFEGLKAQRYLEEIGLSSKNLIFTPKEYNNDDNSIKDNLMFLLNNPSA 146 Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ---IEKLIATLHASLQQRWSVADMAAT 209 ++ + L Y + + K Q + + I + + SV ++A Sbjct: 147 -PDSAILGHLYLFFYALLENSSFNNTKSASNLQEFYVREAINYIEKNYNNNISVENIAKW 205 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 ++ ++F TP+E+ + RL A +LK S+ E+++ + + FHFS+ Sbjct: 206 CNLDRSYFGKIFKNSMKTTPQEFLIKYRLSKACEMLKDNNISIREISELTGYPNQFHFSR 265 Query: 270 AFKHKFGYAPSAVLKNTD 287 +FK + +P Sbjct: 266 SFKEVYNMSPRQWRNQNK 283 >UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IHE3_CLOBU Length = 285 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 112/249 (44%), Gaps = 14/249 (5%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-V 106 P P I + ++ Y ++G G L+ NG+ LH N + P DI Y + Sbjct: 30 CTPSHSFGPAIRDHFLIHYIIEGSGTFLV-NGKLYKLHKNQGFIIFPDDITYYEADNHTP 88 Query: 107 WEQYWMEFTPTS----MMDIPVGQQSVI--YNGEIYNQE----LTEVAELITSPEAIKNN 156 W W+ F + + +++ I Y+ + + +E + + ++L + E Sbjct: 89 WIYKWVGFKGIKAEYYLQCAGLTKENPIFEYSNDKFLEECFDNMIKASKLKYASELKLQG 148 Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216 L FL+++I + + + + I+K + + + ++ ++++AA + + + Sbjct: 149 LLSIFLSELI--ELSSIDSSSDYYYKDVYIKKCLNYIEMNYSRKLLISEIAALLGLNTKY 206 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 +F G TP++Y + R++ A L+K S+ +++ ++ + DS FSK FK + G Sbjct: 207 FSLIFKESIGVTPQQYIISFRVNKACELMKNFKLSICDISRSVGYDDSLAFSKIFKKQKG 266 Query: 277 YAPSAVLKN 285 +P + Sbjct: 267 MSPKKYREQ 275 >UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQR6_BACS4 Length = 302 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 106/262 (40%), Gaps = 14/262 (5%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLV 106 P P+ N ++ Y ++G G IL +G+ + N + P +I Y + Sbjct: 34 CDPYHSYGPISRNEYLLHYVIKGKG-ILKADGKTYHIGENDAFLIYPSEITYYEADKDDP 92 Query: 107 WEQYWMEFTP----TSMMDIPVGQQSVIYNGEI------YNQELTEVAELITSPEAIKNN 156 W W+ F + +++ +++ + E Y + ++L S + + Sbjct: 93 WTYIWIGFDGMKAESCLINASFSKENRVSKFECGETLVHYLNGMLSASKLTYSNDLKREG 152 Query: 157 LAVAFLTKIIYQWICLMYADGK--KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 FL+ +I + + P +E + + + +++ V D+A I + Sbjct: 153 YLYMFLSALIQEKTDNNSDKPEVYDYPFLVYVEHALDFISHNYEKQIKVIDIAEYIGINR 212 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 ++L +F + +P+EY + RLD A +LLK V E+A + + ++ FSK FK+ Sbjct: 213 SYLTTIFKKSLKVSPQEYLVKYRLDKACTLLKNTDLLVNEIARNVGYNNALTFSKVFKNY 272 Query: 275 FGYAPSAVLKNTDQHPTDASPH 296 + +P + H Sbjct: 273 YKMSPKTYRTQHQELVYSNKKH 294 >UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=Q0SVP8_CLOPS Length = 284 Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 15/255 (5%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 P P + N+++ Y + G G + NG+ L N + P + Y Sbjct: 30 CGMEKCLPSHSYGPAVRNNYLIHYIIDGEGTYYV-NGQSYRLRKNQGFLICPNTLTYYKA 88 Query: 103 -EGLVWEQYWMEFTPTSMMDIP----VGQQSVIY------NGEIYNQELTEVAELITSPE 151 + W W+ F + + ++I+ + EIY + E+ + S E Sbjct: 89 SKDNPWTYMWIAFNGIKAKKYLNYANLNEDNLIFEYTEDDSLEIYINRMFELNRMNYSNE 148 Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQR-WSVADMAATI 210 L FL+K+ + + +EK I + + + D+A + Sbjct: 149 LEIQGLLYLFLSKLAMS--KNENSLKSNNISDFYVEKAIEFMQNNYLNPDLKITDVANFV 206 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 + ++L LF + +P+E+ L+ R++ A SLLK SVG ++ ++ + D FSK Sbjct: 207 GLNRSYLTHLFKKSLKLSPQEFLLNYRINEATSLLKNTNLSVGTISKSIGYNDQLTFSKV 266 Query: 271 FKHKFGYAPSAVLKN 285 FK G +P N Sbjct: 267 FKKVKGISPKTYRDN 281 >UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CX81_PAESJ Length = 272 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 11/246 (4%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LV 106 P P I + + + +G G + + + L P + SY + Sbjct: 28 CSPNHAFGPGIRDHYKVHFVHRGTGTVQIGSST-FKLTSGQAFLAYPGKVISYQADAFDP 86 Query: 107 WEQYWMEFTPTSMMDIP-----VGQQSVIYNGEIYNQELTEV----AELITSPEAIKNNL 157 W W+ F + ++ ++SV + + L E+ A+ + + +L Sbjct: 87 WSYSWIGFRGEQVGEVLERTKLTSEESVFPMDKQFMPNLYELLLESADHPKNHDLRLTSL 146 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 + FLT +I A + Q I + + +H+ + +V MAA++ +L Sbjct: 147 LIEFLTVLIDSLPSSADAGVQPRKQDTYIHRSLDFIHSHFSEPITVQQMAASLGLDRKYL 206 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 LF G P++Y L+ R+D A LL++ S+GEVA ++ + D+ FSK FK G Sbjct: 207 SYLFKEAMGLPPQQYLLNYRMDRAGELLRKGEYSIGEVARSVGYQDALLFSKMFKKLKGV 266 Query: 278 APSAVL 283 P Sbjct: 267 PPKLYK 272 >UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488V5_COLP3 Length = 290 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 109/287 (37%), Gaps = 15/287 (5%) Query: 5 LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64 L + ++ TP+ + + + ++ G+ + ++ + + + + Sbjct: 9 LTADGIRFITPHVLVKRLQNHALAKGLFVTAMGYYPTASGHAMERKGHP-------DHIL 61 Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP 123 +Y G G L G+ ++ I +L HSY W YW+ F T D Sbjct: 62 IYCTAGSG-FLTMAGKTTEINSGDIFYLPAGSQHSYQASKELPWTLYWLHFDGTLANDFC 120 Query: 124 -----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178 V ++ I + ++ L S + + + + +I L+ K Sbjct: 121 QHINIVERKFTIGVQPRVIRVFDGISHLRHSSHNLAEFIQGGHQVQALLSYIALLVQQRK 180 Query: 179 KDPQRR-QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 E L A + + + + +A S+ + F + TG++P Y+++ + Sbjct: 181 PSAINTFDTENLRAMMQEHIHSKLDLDSLAEAAKLSKYHFSKKFKQVTGESPISYFINMK 240 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 + A LL SV VA L + D+++FS+ FK G AP+ K Sbjct: 241 MQRACYLLDSTPRSVKHVASELGYHDTYYFSRLFKKNIGMAPAIYRK 287 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 101/279 (36%), Gaps = 18/279 (6%) Query: 20 LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL-KN 78 + N+ S + I D P P + ++++ Y + G G L + Sbjct: 6 FYVFHNISSVDLYPIQFGKEKCD-------PWHHYGPTLTHNYLFHYILSGRGSFLENER 58 Query: 79 GEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN 137 E I L + P + SY + W W+EF + N Sbjct: 59 HEAIQLGPGQGFLMPPNTVCSYTADQDDPWTYCWIEFNGLKAANFMRQAGLNANNLIFTP 118 Query: 138 QELTEVAELITSPEAIKNNLAV--AFLTKIIYQWICLMYADGKKDPQRR-------QIEK 188 + ++ + + E I N + +FL +Y + + K PQ+R I + Sbjct: 119 HKPMIISSIKDTLETIIRNHSQHESFLIAQLYLLVDHLIRFSKHSPQQRPNEIHSFYIRE 178 Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 I + SV +A + + RLF + TP ++ L R++ + LL Sbjct: 179 AIHYIQDHYMDNPSVDQLADICHLNRNYFTRLFKQELHMTPSQFILTYRINQSCELLAST 238 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 S+ ++AD + + + F+FS AFK G P + Sbjct: 239 NRSIRDIADQIGYSNQFNFSSAFKRVKGMTPMEWRRRYR 277 >UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococcus RepID=MSMR_STRMU Length = 278 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 113/249 (45%), Gaps = 14/249 (5%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYW 111 P I +++V + ++G GK+ + N + L I L Y + + W W Sbjct: 32 SFGPTIRDNYVIHFILEGKGKLTI-NQHTLDLAAGDIFLLPKDISTFYQADLQMPWSYIW 90 Query: 112 MEFTPTSMMDIPVGQQSVI--------YNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163 + F+ + +I + Q S+ + ++++Q +T + T ++ L V L Sbjct: 91 IGFSGSKAENI-LKQSSLFKRFYCHSGRSSKLFSQMMTIIQFANTPLTSVNELLMVGELY 149 Query: 164 KIIYQWI---CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 K++ I L + + + + ++ +H+ V D+A + S ++L ++ Sbjct: 150 KLLAALIEEFPLSHLEESNSSTKAYVNQVKKIIHSQYGSSLRVNDIAKKLNLSRSYLYKI 209 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 F + T + KEY L R+ + LL+ S+ E+++++ F DS FSKAFK+ FG +PS Sbjct: 210 FRKSTNLSIKEYILQVRMKRSQYLLENPKLSIAEISNSVGFSDSLAFSKAFKNYFGKSPS 269 Query: 281 AVLKNTDQH 289 K + Sbjct: 270 KFRKEIQNN 278 >UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bacteroides fragilis 3_1_12 RepID=UPI0001B4A5A3 Length = 302 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 126/296 (42%), Gaps = 29/296 (9%) Query: 10 VKNETPYNIPLLINENVISSGISLIS-----LWHTYADEHYRVIWPRDKKKPLIANSWVA 64 N+ +P I + ++ + ++ + ++ +A HYR ++ + Sbjct: 17 FTNQRAIVLPEAIKKILVGNELTNLLYVTDIGYYPHATGHYRARRYGSQQ-------HIL 69 Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP 123 +Y +G G + G++ + + ++ H Y E W YW+ FT + Sbjct: 70 IYCTEGEGWYSIH-GQRQKVCKDQFFIIEAGLPHIYAASENSPWSIYWLHFTGEK-SHLF 127 Query: 124 VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF-LTKIIYQWICLMY--ADGKKD 180 + ++ + + + + E I NL + + + + Y +CL + A K Sbjct: 128 NSFYNKLHKIDESPN--ARIKDRMQLFEEIYQNLEMGYSIENLEYTTLCLWHFIASFKFV 185 Query: 181 PQRRQIEKL---------IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 Q R+I + I+ + +++++ S+ D+A ++ S + ++FL+ +G TP Sbjct: 186 SQFREINRAKQGDVTQEAISYMRKNIEKKLSLDDIAGSVNYSSSHFGQVFLKKSGYTPLN 245 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 Y+ ++ A LL + E+A+ L F+D +HFSK F + G PS+ K Sbjct: 246 YFNQLKIQKACQLLDFSDLKIKEIAEQLGFYDQYHFSKVFYKQIGETPSSYKKRNK 301 >UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MQ0_JANSC Length = 313 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 9/269 (3%) Query: 28 SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQ-ITLHG 86 S+G + ++ + Y + K + + ++ V+ +G G++ L +G + +H Sbjct: 36 SAGFTQVAPYAVYPAGTHPKDHLFSKTRGRVLQAYQIVFISKGRGRVELGSGRKAQEIHA 95 Query: 87 NCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPT----SMMDIPVGQQSVIYNGEIYNQELT 141 + L P H Y E + W ++W+E T S+ + I + Sbjct: 96 GQVFVLFPNVWHRYAPEPSVGWTEHWVECKGTAFDMSLNAGLLDPGRPIIRHPNFEAVHD 155 Query: 142 EVAEL--ITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ 199 AE+ + +A+ N ++ L+ + + + +D R + L Sbjct: 156 TFAEIHGLAGTDAVGNQPVLSMLSLKLLAILA-GPRNANEDSTNRLVNSARMILLEHCTG 214 Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259 + + D+A + S + LRR F TG + K+Y + R+ A LL SV VA L Sbjct: 215 QRPMEDIADELNVSYSTLRRTFRVQTGMSMKDYQMAMRIQKAKDLLDNTELSVKGVAGQL 274 Query: 260 NFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 F +FHFS F+ G PS Q Sbjct: 275 GFSSAFHFSSQFRKTVGCPPSDWRARLGQ 303 >UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS family) protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692C08 Length = 288 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 104/252 (41%), Gaps = 15/252 (5%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105 P + P + + ++ + + G G + G+++ L ++P ++ Y + + Sbjct: 28 SQTRPGHQIGPRLCDYYLMHHVISGKGIFMY-RGKELELKAGDTFLIEPEELVRYEADQV 86 Query: 106 -VWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAEL-------ITSPEAIKNNL 157 W W+ F + + ++ ++ V+EL + + + Sbjct: 87 NPWMYRWVAFQGKGVPEALEKTGFSSSRCIVHTRDNQNVSELFSTILSVLQDKKEGAHQK 146 Query: 158 AVAFLTKIIYQWICLMYADG-----KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 A+ +L + + +Y R ++K I L + S+ MA + Sbjct: 147 ALGYLYVLFGELCEAIYPKTGIGMRTSSESGRTVQKAIHYLSTQYAEDISIETMADNLGY 206 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ-GNSVGEVADTLNFFDSFHFSKAF 271 + A+L R+F + TG TP + L R+D A LL+Q+ ++ ++A ++ F D +FSK F Sbjct: 207 NRAYLSRIFKQETGLTPVTFLLKLRIDKARFLLRQRMELTIEQIASSVGFHDPLYFSKQF 266 Query: 272 KHKFGYAPSAVL 283 K + AP+ Sbjct: 267 KRFYKCAPTEYR 278 >UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n=2 Tax=Bacteria RepID=B5JKR3_9BACT Length = 301 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 16/265 (6%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 HY K+ + + +Y + G G L ++I + I + H+Y Sbjct: 39 GHYPEARNHLVKRDQGCPNHILIYCIGGQGWYSLNGEKRIPVQAGQAILIPAKSPHAYGS 98 Query: 103 -EGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161 EG W YW+ F+ T + N IY L A +IT+ E Sbjct: 99 TEGQSWRLYWIHFSGTEADGLFNFLSDERTNALIY---LPHHASIITAFEDAIRWTQREH 155 Query: 162 LTKIIYQW------ICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAAT 209 +++ + + + A+GK+ R ++ I + +L+ S+ +A+ Sbjct: 156 SKSVLHAFAGSCSRLLGIIAEGKRPNSSRARFVEERVRSTITRMRETLRSPLSLEQLASE 215 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 S LF + T +P + Y R+ LA LL + EVA+T + D+++FS+ Sbjct: 216 ACLSVPHYSALFKKQTSSSPIQMYSQMRIQLACELLHNTDLGIKEVAETAGYEDAYYFSR 275 Query: 270 AFKHKFGYAPSAVLKNTDQHPTDAS 294 AFK G PSA + D+ D S Sbjct: 276 AFKKVMGCPPSAYRNSLDKRQRDPS 300 >UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVH4_PAESJ Length = 287 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 111/257 (43%), Gaps = 16/257 (6%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWE 108 P ++ P + + ++ ++G G+ G+ L ++P + SY W Sbjct: 32 PSHQRGPKVYDFYLMHTVLEGKGEFTC-GGKSYPLQAGDTFLIEPEALVSYISNADEPWL 90 Query: 109 QYWMEFTPTSMMDI----------PVGQQSVIYN-GEIYNQELTEVAELITSPEAIKNNL 157 W+ F ++ PV + + I G +YN + + + Sbjct: 91 YRWVAFNGPQAAELAQAAGFSVANPVAETAAIRRVGVLYNHIFSIFRKNDPAAHLKAAGY 150 Query: 158 AVAFLTKI--IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 L + +++ A D + I+++I L Q S+ MA + + A Sbjct: 151 LQLLLAEFCTVHKLSEDNAAMTNMDDTDKLIQQMIHYLSTQYAQPVSIEQMAESFGYNRA 210 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ-QGNSVGEVADTLNFFDSFHFSKAFKHK 274 +L R+F RYTG++P + L R+D A ++++ +G ++ ++A ++ DS +FSK F+ Sbjct: 211 YLSRVFKRYTGESPITFLLKLRIDKARQMIREREGLTIEQIAASVGLQDSLYFSKQFRRF 270 Query: 275 FGYAPSAVLKNTDQHPT 291 +G +PSA ++ Q T Sbjct: 271 YGLSPSAYRESMRQMKT 287 >UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0R7_9CLOT Length = 322 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 111/280 (39%), Gaps = 9/280 (3%) Query: 10 VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69 K+E IP + L+ + + +++ A ++ +Y + Sbjct: 38 FKDEKYIIIPTESFSDYAE--HPLVRTIYPTDVGFFPRARAHYREREDGAQQYILIYCTE 95 Query: 70 GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQS 128 G G I +++ + + + H Y+ + W W F + P+ + Sbjct: 96 GKGCIEVED-RTYHIGRSDAFCIPKGRRHKYYADPEDPWSILWAHFKGEVTLCYPLEECR 154 Query: 129 VIYNGEIYNQ-----ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR 183 V++ + + ++ + N + ++ + +I I + Q Sbjct: 155 VVHMNSRQSDNRMMVLFKLLFRVLERNYTLGNFIYISQVLSLILSEIYFREKTDESTVQD 214 Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 R + +I ++ +L++ ++ +++ + S ++L +F TG++P E+++ ++ A Sbjct: 215 RHVTMVIRFMYENLKRSLTLEEISEEVKLSRSYLNTIFKTQTGRSPVEFFIHLKMQEACK 274 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 LLK + EV+ L + D ++FS+ FK G +P Sbjct: 275 LLKATDMYIYEVSSELGYEDQYYFSRIFKKVVGVSPRDYK 314 >UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NB33_LEPBD Length = 283 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 10/255 (3%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 Y P K P + ++ Y G G G+ L F++P +I Y + Sbjct: 21 GYEETKPLHKYGPTTRSGYMLHYIKSGKGTFYS-RGKTFHLKAGEFFFIEPEEIIWYEAD 79 Query: 104 G-LVWEQYWMEFTPTSMMDIP----VGQQSVIYN----GEIYNQELTEVAELITSPEAIK 154 W YW+ F + + V + I++ G+I ++ E+ E+ E Sbjct: 80 EYEPWAYYWIGFRGNMVSEYLRRTSVNKNKPIFSAQKGGDIIRDKIVEIFEISVISEDND 139 Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 L L + Y C KKD + + K + + + ++++A + Sbjct: 140 LLLNARLLEILYYLSECFPLTYAKKDSKNTILAKALQIMRNNFDTSVHISEIAKALYIDR 199 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 +L R+F PK+Y + R+ A LL Q V +A ++ D+ +FSK FK+K Sbjct: 200 TYLHRIFKEKMKIAPKDYLTNLRIAKAKELLTQTDYPVNIIAQSVGIEDAQNFSKLFKNK 259 Query: 275 FGYAPSAVLKNTDQH 289 +P K+ Sbjct: 260 ENISPINYRKSYKNS 274 >UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon transcriptional regulator, putative n=29 Tax=Firmicutes RepID=A3CML2_STRSV Length = 290 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 16/258 (6%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 Y P P I +++V Y +G G+ K G+ + L + LKP ++ Y + Sbjct: 34 GYEECTPSYSFGPAIRDTYVLHYITKGKGQFHYK-GKIVDLKAGDLFLLKPNELTFYQAD 92 Query: 104 GL-VWEQYWMEFTPTSMMDIPVGQQS-----VIYNGEIYNQELTEVAELI--TSPEAIKN 155 W YW+ T + D Q ++ N E + ++ E + + + N Sbjct: 93 KEEPWSYYWLGMTGGRVYDYFNHSQIAEDCYLLANQERKTDRIGKIVENLVYFAEQTKSN 152 Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQR-----RQIEKLI-ATLHASLQQR-WSVADMAA 208 LA + +Y+ I + + K +Q+ + S+ DMA Sbjct: 153 QLAQLHIMGQLYELIFHLGSVAYKPQANTLSASQQLYLACKQIIDTQYPNPNLSIQDMAI 212 Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268 + ++L +F +PKEY R+ A LLK V +A ++ F D +FS Sbjct: 213 KLSVHRSYLTTIFKEEHQSSPKEYLEYVRMHRAKQLLKSTREPVQFIAYSVGFSDPLYFS 272 Query: 269 KAFKHKFGYAPSAVLKNT 286 KAFK FG++PS+ + + Sbjct: 273 KAFKKYFGFSPSSFREQS 290 >UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptococcus RepID=C5VY46_STRSE Length = 278 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 94/253 (37%), Gaps = 13/253 (5%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL-LKNGEQITLHGNCIIFLKPMDIHSYHC 102 P P + ++ Y + G G + + L + P I SY Sbjct: 24 GMEACKPLHSFGPTMKQHYLFHYIISGSGTFYDTSDQREYHLTAGQGFLISPDAICSYEA 83 Query: 103 E-GLVWEQYWMEFTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAELITSPE 151 + W W+EF P+ Q + E+ ++ L Sbjct: 84 DEKDPWTYIWLEFDGLKTEHFLRQAGLSKEQPIFSQREMPTSSPVYHEMKQILALHHQKS 143 Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211 A+ F++ +I + + ++ + I + I + + ++ SV D+A Sbjct: 144 ALVLGHLYLFISCLIDCSLTKTSSKHDENKEF-YIREAINFVERNYEKAISVDDLAQVCN 202 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 + + RLF +P+++ + RL A LLK ++ E+A+ + + + F+FS AF Sbjct: 203 LNRHYFSRLFKEQMNISPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSNQFNFSTAF 262 Query: 272 KHKFGYAPSAVLK 284 K + +P+ K Sbjct: 263 KRHYQISPNRWRK 275 >UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium cellulovorans 743B RepID=C5RL17_CLOCL Length = 282 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 100/254 (39%), Gaps = 16/254 (6%) Query: 47 VIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-L 105 P P + ++ Y G G + NG L + P DI +Y + Sbjct: 28 TCIPNHTWMPNLKERFLIHYIFSGKGSFEI-NGYTYNLESGQGFLISPGDIATYKADDKD 86 Query: 106 VWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161 W W+EF + I + ++ +++ + ++L E + K+ Sbjct: 87 PWTYAWVEFNGRLSEKFLHQIGLSSKTPVFSCK--KKDLLEASFQYIFDACKKSRNNNLL 144 Query: 162 LTKIIYQWICLMYADGKKDPQRR--------QIEKLIATLHASLQQRWSVADMAATIPCS 213 + +Y ++ +++ + + I + + + + + +++MA + + Sbjct: 145 ILSSLYHFLAMIHEASAPEQTEKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLSLN 204 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 ++ LF G TP+ Y ++ R+D A L+K ++GE++ + + D FS+ FK Sbjct: 205 RNYMSTLFKESVGITPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMFKK 264 Query: 274 KFGYAPSAVLKNTD 287 FG P + + Sbjct: 265 LFGIPPKNYRNSIN 278 >UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=Serratia RepID=A8GGG4_SERP5 Length = 282 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 12/254 (4%) Query: 51 RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQ 109 P + ++ Y + G G + + G + + P D+ +Y + W Sbjct: 28 GHSFGPAVRQHYLFHYVISGTGVLHSEYG-AFPVVAGEGFLIHPHDVTTYRADKKDPWHY 86 Query: 110 YWMEFTP----TSMMDIPVGQQSVIYNGEIYN---QELTEVAELI-TSPEAIKNNLAVAF 161 W+E + + +Q IY + Q L+ + +L+ E L +++ Sbjct: 87 MWLEVDGLVAGKIFEECRLSRQFPIYRPRKTDETPQALSYLRQLVSHDDEHRLKTLGLSY 146 Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 L L +D + + + K + + + ++ +AA + ++L RLF Sbjct: 147 LFFSALIDNALQGSDEHPSDKTQHLHKAVKLIENRYHEHLTIERLAAYCNINRSYLCRLF 206 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 G PKEY L+ R+ LA SLL+ ++ V ++ + + HFSKAFK G +P+ Sbjct: 207 KGAYGIGPKEYLLNFRMTLATSLLRNSRTAIKVVGISVGYENQLHFSKAFKQVHGVSPAQ 266 Query: 282 VLKNTDQHPTDASP 295 + P +ASP Sbjct: 267 WR--QENQPDNASP 278 >UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KAQ8_BACHD Length = 287 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 108/267 (40%), Gaps = 19/267 (7%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 Y +P K P + + ++ ++G G G+ +L F+ P ++ +Y Sbjct: 23 SGYSQTFPYHKVGPQVHDYFLLHVVLRGKGSFHCA-GKTYSLSAGDSFFIYPKELVTYES 81 Query: 103 EG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNG------------EIYNQELTEVAELITS 149 + W W+ F + + +++ + + EL + Sbjct: 82 DRTDPWYYTWVAFQGPFFEETLRSAGIQPESPIVSLGGKGSMIKQLFYDLYSSMTELKVA 141 Query: 150 PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAA 208 N +++ I Q L K+D Q + I+ +I L + S+ +AA Sbjct: 142 SSLKTNAYLRLIISEFIEQTTILDEHSQKEDHQLDQHIQDVIRLLSLRYFEPLSIETIAA 201 Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268 + + + + F YTG +P +Y L+ R+ A +LL++ ++ EVA ++ + D +FS Sbjct: 202 SYGYNRTYFSKKFKEYTGYSPSKYLLNIRMKKAEALLQKS-LTIQEVASSVGYRDPLYFS 260 Query: 269 KAFKHKFGYAPSAVLKNTDQHPTDASP 295 K FK G APS QH ++ P Sbjct: 261 KQFKQWSGVAPSVFR---QQHLKESEP 284 >UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BFD5_9FIRM Length = 305 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 103/258 (39%), Gaps = 16/258 (6%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 + P P +++ Y ++G G + + L ++P + Y Sbjct: 22 CGFAECKPLHSYGPAARPNYILHYVMKGKGIYQVGE-TKYPLKEGQAFLIEPESLTFYQA 80 Query: 103 EG-LVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEV-AELITSPEAIKNN 156 + W W+ F T + D+ + + + E Y +EL E+ E++ + N Sbjct: 81 DKTDPWSYLWVGFGGTEAQRFVRDLGLNSRQLTCECE-YGEELKEIVFEMLHHTCSTAEN 139 Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATI 210 L +L +YQ+ ++ + +++ IA + Q+ +V D+A + Sbjct: 140 LY--YLQGKLYQFFSVLARGIEIQQYSNDTKESIHVQEAIAYIKNYYSQKITVEDIANYL 197 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 + ++L +F+ G +PKE+ + R+ L SV E+A + + +S F K Sbjct: 198 ALNRSYLYTIFMNSLGISPKEFLTEFRISRGKEQLALTDLSVEEIAVSCGYRNSLAFGKV 257 Query: 271 FKHKFGYAPSAVLKNTDQ 288 FK K G P+ + + Sbjct: 258 FKQKMGMTPTQYRNDNRK 275 >UniRef50_B8FW52 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FW52_DESHD Length = 282 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 116/292 (39%), Gaps = 31/292 (10%) Query: 3 GKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW 62 G L+ S+ TP N+ + +I +G + D++Y V + +S+ Sbjct: 7 GVLEGSEYYFFTPSNLAKSLFFYLICTG-------KFFCDQNYNVEREK-------YSSY 52 Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDI 122 + ++ V+G G + N T N +I L + H Y+ W W+ + ++ Sbjct: 53 LLMFVVKGQGTVCY-NDRIYTAKENDLIILNCHNPHRYYTNTE-WTTLWLHYDGNISKEL 110 Query: 123 P------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL---- 172 G + N I + L + E + + L ++ +++ + + L Sbjct: 111 FDLIYDRFGCVISLSNLLIIPKYLNRILEDARAGSPLSEPLMSCYIQRMLSELLMLSDDF 170 Query: 173 -MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 + K DP + + IA + + +++ S+ +A+ + S R F + TG +P E Sbjct: 171 ILPESDKSDP----VLEAIAFIETNFKEKLSLKVIASHVNMSSFHFARTFKKDTGYSPYE 226 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 Y + RL+ A LLK+ + E+A F +F F + G P Sbjct: 227 YVVKTRLNHAKMLLKKTNLQIKEIAAECGFSTESNFVVNFHNNIGVTPGEFR 278 >UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RH22_CLOCL Length = 278 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 102/273 (37%), Gaps = 11/273 (4%) Query: 20 LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNG 79 ++ +IS I+ + P+ P I + ++ Y + G GK NG Sbjct: 2 MINERYIISESINKENRDLLVYHHGIEQCIPKHCYGPAIRDHYLIHYILAGKGKFH-ANG 60 Query: 80 EQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYN-- 132 + L + P + Y + W W+ F + + ++I+N Sbjct: 61 KIYELVTGDGFLILPDMVTFYEADENEPWTYVWIGFRGIKAAAYLESANLNMNNLIFNCT 120 Query: 133 GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD--GKKDPQRRQIEKLI 190 EI + ++ + L +L+ I+ + I + D + K + Sbjct: 121 SEILKEYFFKIMNANLYSSGYELRL-QGYLSIILSELIDISAMDILDTNKHSDIYVRKAL 179 Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250 + + SV +A I + + +F ++ G +PKEY + ++ A LK Sbjct: 180 QYIETNYSGSTSVDAVAKAIGLNRNYFSTIFKKHIGISPKEYIIRYKIGKACEFLKNNSL 239 Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 ++ E++ ++ + D FSK FKH G +P Sbjct: 240 TISEISKSVGYNDPLSFSKVFKHIKGVSPKYYR 272 >UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXI4_DYAFD Length = 298 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 114/300 (38%), Gaps = 26/300 (8%) Query: 6 QSSDVKNETPYNIPLLI-----NENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 +S E IP + +IS ++ A HY ++P + Sbjct: 3 KSRGFDGELIIEIPKVATSHCEQLPLISHLFISRMGYYPKALHHY-------YQRPNGIS 55 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTP--- 116 + +Y G G I L G Q+ + +I L H+Y + W YWM Sbjct: 56 QAILLYCTDGQGWIEL-GGNQLHVRAGEVILLPTELPHAYGADTQNPWSIYWMHIAGDHS 114 Query: 117 ----TSMMDIPVGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAVAF-LTKIIYQW 169 ++MD ++ G + N T +A + + N L L + + Sbjct: 115 DAAVAAVMDRDGEPARAVHVGFSDERNALFTHIASTLLKGYSASNLLQANLALPHYLSSF 174 Query: 170 ICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 I + +K EK I + +L S+ ++A ++ S ++ R F + TG Sbjct: 175 IAPEHFGAQKPSAGAGSPTEKAILYMQENLSNSLSLDNIARSVNLSVSFFSRRFKKDTGY 234 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 P EY+ R+ A LL + EVA + D F+FS+ FK + G +P+ KN D Sbjct: 235 APIEYFNYLRIQKACQLLHFSTWRINEVASAIGIDDPFYFSRLFKQQMGLSPAHYRKNKD 294 >UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales RepID=A6LD39_PARD8 Length = 297 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 30/291 (10%) Query: 13 ETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72 E N PL+ + V S G + A+ HY + ++ +Y +G G Sbjct: 22 EQALNNPLVADLVVHSMG------YFPKAESHYI-------DRASGCGEYLLIYCTKGEG 68 Query: 73 KILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTS----------MMD 121 +L +G++ + N L H Y E W YW F ++ Sbjct: 69 WYVL-DGKRYVVPENHFFILPAEKPHQYGSSEHDPWYIYWAHFKGKKAKYISDQLQGVIP 127 Query: 122 IPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP 181 I + S I + + EL V E T EA N + ++F I Y + K Sbjct: 128 IDMDDNSRIGDRIAFFDELLNVLESGTD-EATVNYVNLSFNHLIASFLYVKTYREAKFSK 186 Query: 182 QRRQ----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 + + I + +L+ + ++ ++A+ SE+++ RLF + TG P Y+L + Sbjct: 187 SKAENTFFISLATHFMTENLENKLTLKELASHFGYSESYMYRLFFKETGYAPMNYFLHMK 246 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 +D A LL + +VA L F D ++FS+ FK G +P + + Sbjct: 247 IDRACQLLLHTNMKINQVALKLGFDDPYYFSRIFKKIVGTSPKDYRHSLPK 297 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 98/255 (38%), Gaps = 10/255 (3%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 Y P +++ ++G G ++ N ++ L ++P + Y Sbjct: 17 CGYSECESLHSFGPASRPTYILHIVLEGKGIFVVDN-KKYFLEKGQGFIIEPNIVTFYQA 75 Query: 103 E-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV-- 159 + W+ +W+ F + + +L E+ L+ KN Sbjct: 76 DAKNPWKYFWIGFDGEGAEKYLRELGIIQHKPIFRTDKLDELFSLLKEMLKRKNLTLAEE 135 Query: 160 AFLTKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 L + Y++ L+ + +K+ ++K+I + + +V ++ + + Sbjct: 136 LKLQGLFYEFFSLIVEENSIEEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEYVGLN 195 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 ++L LF + G T +EY RL A LL S+ VA++ + D F+KA+K Sbjct: 196 RSYLSTLFKKNMGITIQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFTKAYKK 255 Query: 274 KFGYAPSAVLKNTDQ 288 K+G P+ K + Sbjct: 256 KYGVTPTQHRKKDRK 270 >UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU Length = 267 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 101/251 (40%), Gaps = 11/251 (4%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE- 103 + P P + +++ Y + G G+ + N + + + P + Y + Sbjct: 1 MQECKPNYSYGPAVRPNYLLHYCLSGQGEYHVNN-QVYQIKAGDAFLIMPNVVTYYQADQ 59 Query: 104 GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQ-ELTEVAELITSPEAIKNNLA 158 W W+ F + + + + +++ + + N+ T +A L + + N L Sbjct: 60 HEPWTYLWISFDGSKTRQYLKRCNLDEHNLVVHCDYINELRETTIAILAHNKLSYSNELF 119 Query: 159 VAFLTKIIYQWIC----LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 + + ++ + Y D ++K I + + Q+ +V ++A + + Sbjct: 120 IQGQLYTFFSFLAKSANITYNDNVAPNYNPYVDKAIEYIQNNYQEMVTVNEIADYLSLNR 179 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 ++L LF ++ +P+E+ L R+ A LL ++ ++A + + + FSKAF + Sbjct: 180 SYLTTLFKKHLHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKAFSNS 239 Query: 275 FGYAPSAVLKN 285 AP K Sbjct: 240 HQMAPRDYRKQ 250 >UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n=2 Tax=Oceanospirillaceae RepID=Q2BQ54_9GAMM Length = 304 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 111/284 (39%), Gaps = 15/284 (5%) Query: 15 PYNIPLLINENVISSGISLISLWHTYADE-HYRVIWPRDKKKPLIANSWVAVYTVQGCGK 73 P +I +I VIS Y Y + + + + +Y + G G+ Sbjct: 11 PESIRFVIPRRVISELALHPLSQGLYPLGMGYYRQASGHQMERQEHDDNLLIYCLDGEGE 70 Query: 74 ILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYN 132 ++ +G++ + I+ + H+Y W YW+ F D Q N Sbjct: 71 AVI-DGQKTRIRSGDILLIPKGVSHTYQARKRKPWTIYWVHFHGHHAEDFAQHLQQRESN 129 Query: 133 GEIYNQELTEVAELITSPEAIKNN----------LAVAFLTKIIYQWICLMYADGKKDPQ 182 Y + + L + EA+ + A + I I L+ K+ Sbjct: 130 QRRYVMPIGIHSRLASDFEALLEARESTYNLNAYICAANQLRQILSHIALLQPLAKQKQS 189 Query: 183 R--RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 R IE++ + + + ++ + +A +I S+ + + TG TP +++ +++ Sbjct: 190 RGGLDIERVHSLMQTHIHEQLDLDTLAESISLSKYHFVKKYKEVTGTTPINHFIQLKIER 249 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 A LL N + EVA + + D+++FS+ FK G +PS K Sbjct: 250 ACHLLDTTNNGINEVAFAVGYEDAYYFSRIFKKLMGVSPSQYRK 293 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 10/242 (4%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYW 111 + + + +Y G G+ N E I + ++ P Y + E YW Sbjct: 58 RNREHGRVDFQLIYITGGKGRFRFHN-ETIEVPSGSLVVYTPGQPQHYSYQAEDGTEVYW 116 Query: 112 MEFTPTSMMDIP----VGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAVAFLTKI 165 + FT S D + Q V G + ++ + + S + +++ A+L ++ Sbjct: 117 IHFTGYSAYDYLQQFGLLTQPVHTVGIIDDVTALFKKIIQELNSHRPLGSHMVNAYLLEM 176 Query: 166 IYQWICLMYADGKKDPQRRQ--IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 + + + Q R I ++IA +H + S++D+A S F Sbjct: 177 LTLLGRRLQTAEEPGAQGRHPDINQMIAFIHEKYSESLSISDLAGECSLSVFRFIHKFKE 236 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 TG TP +Y + R++ A LL + V EVA + + + +FS+ F+ G PS Sbjct: 237 VTGMTPMKYITEIRINEAKKLLSESSLHVKEVAAVVGYDNPLYFSRIFRSTVGIPPSEYK 296 Query: 284 KN 285 K Sbjct: 297 KQ 298 >UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=Lactobacillus RepID=C2EDY7_9LACO Length = 284 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 97/236 (41%), Gaps = 9/236 (3%) Query: 58 IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTP 116 I ++V Y +GCG + L L Y + WE W+ + Sbjct: 46 IRENYVIHYIRKGCGTFSSAGRPVVELKQGDCFILPKGVPCFYQADEKDPWEYSWIGLSG 105 Query: 117 TSMMDIPVGQQSVIYN------GEIYNQELTEVAELITSPEAIKNNLAV-AFLTKIIYQW 169 +I N + L+ + E + +KN+L + L K+ + Sbjct: 106 IRTGEIFAASSISEKNYLCQIQDTEFKNSLSRLYESLHLTHNMKNSLLTESLLYKMFHDL 165 Query: 170 ICLMYAD-GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 + A+ +K R Q + + + S+ D+ + S ++L LF ++ G + Sbjct: 166 LDEFPAEVTRKTNSRTQFRLAVEYMRDNYDTGCSILDVCRGLSVSRSYLYSLFKKFAGSS 225 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 P+++ + R++ A LLK S+ +AD++ + DSF FSKAF+ G +P+ + Sbjct: 226 PQKFLTEIRMEEAEHLLKDTDRSIQNIADSIGYGDSFTFSKAFRKSRGCSPTDFRR 281 >UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae RepID=C6BAA0_RHILS Length = 288 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 9/264 (3%) Query: 27 ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL-KNGEQITLH 85 IS+G + I Y + + I +++ V G G++ +T+ Sbjct: 22 ISTGYTEIGPNSDYPPSRHPDDHHFSWSRGRILSAYQIVQISAGSGRLEFGPERRPVTIA 81 Query: 86 GNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMM-----DIPVGQQSVIYNGEIYNQE 139 I L P H + + W ++W+E ++ + + + + Sbjct: 82 EGSIFLLFPGVWHRFAPDRRTGWVEHWIECRGSAFDFARDAGLLRPELPAHASSSEISGV 141 Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ 199 + L + ++N ++ L + IC AD + R +++ L Q Sbjct: 142 FASIHALAQD-DCLRNQPLLSTLGLQLLALIC-RPADLNTNAVNRLVDRARMVLMERCGQ 199 Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259 SV +A + S + RRLF TG + K+Y + RL A+ LL S+ E+A L Sbjct: 200 PLSVEQLADELGVSYPYFRRLFREQTGMSAKQYQMRVRLQRAIDLLVNTDKSIKEIAGLL 259 Query: 260 NFFDSFHFSKAFKHKFGYAPSAVL 283 F +FHFS F+ G +P+ Sbjct: 260 GFHSAFHFSTQFRQLIGSSPTDFR 283 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 95/253 (37%), Gaps = 8/253 (3%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 + + P K P + ++ + ++G G +K G L ++P +Y + Sbjct: 23 GHSITEPLHKAGPAVKTFYLIHFVLEGEGDFYVK-GAHYHLKKGQGFLIEPDTPATYISD 81 Query: 104 -GLVWEQYWMEFTPTSMMD----IPVGQQSVIYNGEIYNQELTEVAELI-TSPEAIKNNL 157 W W F+ D I + Q I+ E ++ V +++ + ++ Sbjct: 82 EHHPWRYVWFGFSGRCAHDTLSSIGLTQNQPIFTCEDGDKLKKYVFDMLAHNTSGHADHY 141 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216 + + + I D + P + I+ + V +++ + + ++ Sbjct: 142 RLMGMLYLALSVIANAQKDKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSY 201 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 LF +YTG +P +Y + R+ A +L SV +A + + + F K F+ G Sbjct: 202 FSDLFKQYTGMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTG 261 Query: 277 YAPSAVLKNTDQH 289 +P+A Q Sbjct: 262 LSPNAYRLGKRQR 274 >UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides RepID=A6KYC9_BACV8 Length = 298 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 32/298 (10%) Query: 10 VKNETPYNIPLLINE----NVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVA 64 K E +P + E + + S + + + ++ +A HYR RD ++ ++ Sbjct: 8 FKGERAIVLPAFLIEELKQDPLGSELYITDIGYYPHAYFHYRK---RDTEE---VTEFIL 61 Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP 123 +Y ++G G L + Q + N L H+Y E W YW+ F T Sbjct: 62 IYCMEGEGWFEL-DKHQYAVTANQFFILPEHQAHAYGSNEENPWTIYWIHFNGTKAAFFS 120 Query: 124 VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA-------VAFLTKIIYQWICLMYAD 176 G I QE + + E + E I ++++ + + T ++ ++ M Sbjct: 121 AGFDRP---KSITPQEDSRIKERLVLFEEIYSSISFGYSKNYMLYATTSLFHFLGSMKFI 177 Query: 177 GK-------KDPQRRQ--IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 G+ ++ R + ++ I + +L + +AD+AA + S ++ LF TG Sbjct: 178 GEYRDCGSMRNSYRNKDVVQIAIHFMQENLSKTIRLADIAAEVNLSVSYFSNLFEEKTGS 237 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 +P Y R+ A L + +++ + + DS +FS+ F G PSA + Sbjct: 238 SPLRYLTYLRIQEACHYLDFTNLKINQISPLVGYEDSLYFSRLFTKTMGVPPSAYKEK 295 >UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368B4 Length = 289 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 97/240 (40%), Gaps = 11/240 (4%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWME 113 + + +Y G + +L NG +T+ ++ P + Y + E +W+ Sbjct: 42 RATGRPDYQLLYIASGKAEFVL-NGAAVTIPAGNMVLYGPGEYQQYTYLLEDRPEVFWVH 100 Query: 114 FTPTSMMDIPVGQQSVIYNGEI--------YNQELTEVAELITSPEAIKNNLAVAFLTKI 165 FT D+ + + I Y + + P + + + + ++ Sbjct: 101 FTGYEAADLLSRTGLSLEDFRILRTGCASRYQDLFLSMIRELQLPRPLSGDFSSLYFKEL 160 Query: 166 IYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 + + GK PQ ++++E + H + ++D AA++ S W R F +Y Sbjct: 161 LLTVERQIAEGGKNKPQIQKEMEHAVHFFHENFSADIDISDYAASLHMSTCWFIRSFKQY 220 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 G P +Y R++ A LL+ V E+ + + + +FS+ FK + G +P+A K Sbjct: 221 VGVPPLQYLTSIRINKAKELLESTDCPVSEIGSIIGYENPLYFSRIFKKQTGLSPAAYRK 280 >UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1C2_HALOH Length = 276 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 100/251 (39%), Gaps = 14/251 (5%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-V 106 P P + + ++ + G G + L + P + Y + Sbjct: 28 CKPGHSYGPAVRDHYLIHFIYNGRGIFQVGENT-YHLEAGQGFLICPDIVTYYQADRHNP 86 Query: 107 WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE----LTEVAELITSPEAIKNNL---AV 159 WE W+ F D + + ++ +++ L + E +T+ +K + + Sbjct: 87 WEYAWIGFHGLKAKDY-LNRANLSLANPVFSDTDGSPLRFIFEEMTAARKLKRSREIKLI 145 Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQ--IEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 + + I L + D ++ I+K I + + + V D+A + ++L Sbjct: 146 GLIYVFLSHLIELNVSGSTPDNNSKENYIKKAIEYIEKNYSRHIKVIDIANHVGLDRSYL 205 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQ--GNSVGEVADTLNFFDSFHFSKAFKHKF 275 +F + +P++Y ++ R++ A L+K + S+G+++ ++ + D FSK FK Sbjct: 206 WSIFNEFLNTSPQQYLINYRINKACELMKNRNLNLSIGDISRSVGYKDPLTFSKTFKKTK 265 Query: 276 GYAPSAVLKNT 286 G +P K + Sbjct: 266 GISPLHYQKQS 276 >UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales RepID=C7X929_9PORP Length = 296 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 108/282 (38%), Gaps = 32/282 (11%) Query: 19 PLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKN 78 PL+ N V G +H EH + + +Y +G G + Sbjct: 28 PLINNLYVRKIGFFPRVKYHFLQKEH-------------GCDYAMLIYCTEGKGWYRIL- 73 Query: 79 GEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN 137 G+Q T+ I + P +S+ + G W YW+ F + I Sbjct: 74 GKQYTVEKYQYIIIPPGIPYSFGADEGDPWTIYWLHFQGKLCDQFLPSHPVPVT---ISP 130 Query: 138 QELTEVAELITSPEAIKNNLAVAFLTK-IIYQWICL-------------MYADGKKDPQR 183 E + + + + E I ++ ++ ++ + +IY +CL + + Sbjct: 131 NEYSRLQDRLRLFEEIYSSFSMGYIKEYMIYSSMCLYNFLASFIYLEQFRHIMIPSQKEY 190 Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 ++I + ++QQ ++ ++A+ S + LF TG +P Y++ ++ A Sbjct: 191 PFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGETGVSPMNYFIRLKIQKACE 250 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 ++ + E+A L F D+ +FS+ F G +PS K Sbjct: 251 YIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRKK 292 >UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DM00_9BACT Length = 282 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 28/288 (9%) Query: 2 NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61 N L ++ E PY + E V+SS W K+ L Sbjct: 12 NTNLFFKNINFELPYKLLNFGRERVVSSDYR----------------WHGLKRGKLETAI 55 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE--GLVWEQYWMEFTPTSM 119 W YT+ G GK+ N T+ + + + D H Y + WE ++ F T + Sbjct: 56 WQ--YTLSGSGKLRSNN-TTYTIQPHQAMLVTSPDDHEYFFDSMDSHWEFIYLSFCGTDL 112 Query: 120 MD---IPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + + + S + + I ++ ++ +L +P + V +++ YQ+I ++ + Sbjct: 113 VQHYKNLIAKTSPVCSLPINSKLISLFLQLTQNPHLSDSQTQVQH-SQLCYQFIMELHQE 171 Query: 177 ---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233 K+ P + I+ ++ ++ L Q S+ +MA+ S R+F + G +P EY Sbjct: 172 ILADKQKPLPQAIQNVLNHINHHLNQAISIDEMASVAKLSRYHFSRVFSKAIGISPNEYL 231 Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 + +++ A LL Q SV ++A + D +F K FK FG++P A Sbjct: 232 IKTKMEYAQKLLFTQNLSVKQLAHECGYHDPSYFCKVFKKHFGHSPKA 279 >UniRef50_P43465 Raffinose operon transcriptional regulatory protein rafR n=9 Tax=Lactobacillaceae RepID=RAFR_PEDPE Length = 277 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 14/252 (5%) Query: 47 VIWPRDKKKPL-IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105 P K + +S+V Y +G G N L I L Y + Sbjct: 24 ACLPNYTYKGNNVRDSYVIHYIQEGKGTFAAANHPATVLKAGDIFILPKGTPCFYQADND 83 Query: 106 -VWEQYWMEFTPTSMMDIPVGQQ--------SVIYNGEIYNQELTEVAELITSPEAIKNN 156 W+ +W+ F+ ++ + + NG IY +L+E+ +++ P ++ N+ Sbjct: 84 QPWKYFWIGFSAGIRIEAMLSGSLLAQKCYLRQVQNGHIY-ADLSELYKVLHIPNSLIND 142 Query: 157 -LAVAFLTKIIYQWICLMYADGK--KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 L + + ++ Y + AD K Q ++ L + ++ D+ + S Sbjct: 143 VLLGSLIYRLFYDLLRWYPADATNIKVKSTEQFNLAVSYLQENYSTGCTIMDLCHYLNLS 202 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 ++L LF + +P++ RL+ A L NSV +A+ + + DSF FSKAFK Sbjct: 203 RSYLYTLFKTHANTSPQKLLTKLRLEDAKQRLSTSNNSVQSIANMVGYKDSFTFSKAFKR 262 Query: 274 KFGYAPSAVLKN 285 G +PS K+ Sbjct: 263 YSGASPSYYRKS 274 >UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYQ6_BACS4 Length = 294 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 114/287 (39%), Gaps = 13/287 (4%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 S ++ NET I +E VI + + + + Y H + D K N+++ Sbjct: 3 HSLNLPNET---IGFRTHEKVIGTLVDIHVVGKQYVHSH---DYYWDGMKRNDKNTFIFQ 56 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDI-- 122 YT+ G G + ++ G + P + Y WE ++ + D Sbjct: 57 YTLSGEGAVFIEGKTHKVQQGQGFMLEVPGEHIYYLPSHSHHWEFIFLTLRGQAAADCWR 116 Query: 123 ----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178 VG I +++ V EL I + A + + + + + Sbjct: 117 YVNRKVGPIINIPIESALIEQVVNVYELAFKKNLIDHYFASSKAYQFVMECYRYFKSFKA 176 Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 K+ I + I ++ + + +SV D+A I S+ + +LF TP +Y RL Sbjct: 177 KEQMPDTITQAINFINKNYKASFSVQDVATNINLSKYYFIKLFKESMNMTPGQYITKVRL 236 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + A++LL +V E+A + + D +F+KAF+ G +P ++ Sbjct: 237 EQAINLLSHTELTVKEIAMQVGYGDDNYFNKAFRKVVGTSPGEFRRS 283 >UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P929_9FIRM Length = 279 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 96/249 (38%), Gaps = 13/249 (5%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104 + P P + + ++ + + G G + +G + + P + +Y + Sbjct: 28 QRCEPLYAWGPGLRDHFLVHHVIVGRG-VYTADGVTHDVKAGDTFIIYPSVVVTYSADAA 86 Query: 105 LVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160 WE W+ F P +Q + E ++ +A++ + +++ A Sbjct: 87 DPWEYCWVGFNGAEARLMIAQTPFTRQRPVVRFEQPDEIREAIADIYRASGTTRSSELRA 146 Query: 161 FLTKIIYQWICLMYADGKKDP-----QRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 ++Y ++ L+ +E I + + + +AA++ S + Sbjct: 147 I--GMLYIFLALLIEQAGAPAPAAGLSLEYVESAIRFIAHNYSGHIDIEAVAASVGISRS 204 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 L R+F+++ P EY R+ A LL V VA ++ + D +FS+ FK Sbjct: 205 HLYRVFMQHISTPPNEYLAKFRISQACELLGHSSLPVSAVAASVGYDDPLYFSRVFKRIT 264 Query: 276 GYAPSAVLK 284 G PSA +K Sbjct: 265 GMPPSAYIK 273 >UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D140_PAESJ Length = 296 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 117/298 (39%), Gaps = 22/298 (7%) Query: 1 MNGKLQSSDVKNETPYNIP-LLINENVISSGISLISLWH----TYADEHYRVIWPRDKKK 55 M+ L+ ++ +P ++ E I + + YA HYR + Sbjct: 1 MDRLLKEEGFPSQKLIVLPDHILAEYAAHPLIRPLHITDIGCFPYARHHYR-------HR 53 Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEF 114 P + +++ +Y GCG + L + +++ + + + H Y E W YW+ Sbjct: 54 PEGSEAYIVMYCTDGCGWVKLDDEKRLEVRKGELTLIPAGTPHEYGSSEEEPWTIYWIHL 113 Query: 115 TPTSMMDIPVGQ------QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQ 168 Q + E E++ + + + V+ L + Sbjct: 114 KGELAFSFFGEQGKAAPVPIPVERSSAIIGLFDECYEMLLKGYTLDHVIYVSQLACHLAG 173 Query: 169 WICLMYADGKKDPQRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225 I L+ A + P R+ IEK I + L+ S+A++AA S +LF + T Sbjct: 174 IIRLVQAHRQAAPSPRRQLDIEKAIQYMTEHLEDNVSLAELAAEAALSVPHFTQLFKKKT 233 Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 G +P +YYL ++ LA L SV V + F D ++FS+ FK G +PSA Sbjct: 234 GYSPIDYYLRLKIQLASQYLDLTDQSVKAVGIRVGFQDPYYFSRLFKKIMGKSPSAYR 291 >UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW55_9CLOT Length = 286 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 99/259 (38%), Gaps = 11/259 (4%) Query: 38 HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97 Y H + + + + ++ + ++G G L NG + + + P Sbjct: 21 SVYRTGHQQCSGGYHR-GLEVRDFYLIHFVMEGGGVYTL-NGRKHPVRKGQAFLIYPSMP 78 Query: 98 HSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156 Y + WE W+ F + N I ++ + EL+ + + + Sbjct: 79 IDYQADAADPWEFCWVGFNGNDARLLMNATGFTPQNPVITLKDPERMEELLMNIYRCRGH 138 Query: 157 LAVAFL--TKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAA 208 F+ T +Y+ + + + + +++ + + Q ++ D+A Sbjct: 139 HPHEFINMTAKLYELLAFLIQEASDPMPAQSRTGVEHVQRACDFIASHYQDPITINDIAG 198 Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268 + + L R+F + +P +Y + RL A +L+ +Q +V EVA F D +FS Sbjct: 199 HVGICRSRLYRVFKAHLSISPLQYLTEFRLREACNLMNRQKATVKEVAYAAGFSDPLYFS 258 Query: 269 KAFKHKFGYAPSAVLKNTD 287 FK G +P +K++ Sbjct: 259 TVFKKSLGQSPKEYMKSSK 277 >UniRef50_A6M1I8 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1I8_CLOB8 Length = 279 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 101/250 (40%), Gaps = 7/250 (2%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 + + P P I + ++ Y + G GK + N + L + P + Y Sbjct: 22 GGHEICAPSHSFGPAIRHHYLLHYILNGKGKYYVNN-KCYELQRGEAFLICPGESTYYKA 80 Query: 103 EGL-VWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI-KNN 156 + WE W+ F T + + + + ++I+ + LI + E N Sbjct: 81 DKEEPWEYCWVSFDGNDASTILKNCGLSKNNLIFKDNSNGIFKERLLSLIHNYEEDSHNE 140 Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216 A+ + + + +K+ +K ++ + V+D+A + + Sbjct: 141 YALIGQLYMCFSSMYDQVNIKEKNTCESYADKARDYIYNNFGYDIKVSDIAKYVGIDRTY 200 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 L ++F+ +P++Y + +RL+ A++LL+ ++ E++ + F D+ F K FK +F Sbjct: 201 LYKIFMEEYKISPQKYLISSRLNTAVNLLETTKMNITEISYSCGFKDTPTFYKHFKKQFN 260 Query: 277 YAPSAVLKNT 286 P K+ Sbjct: 261 ITPVQYRKSN 270 >UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GEN0_LACF3 Length = 278 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 95/251 (37%), Gaps = 11/251 (4%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWE 108 P K P + ++ Y + G G + N LH + P +Y + W Sbjct: 29 PGHKYGPAVRPYYLIHYILSGSGIFKVDNVT-YHLHAGQGFLIVPNCRTTYIADKETPWS 87 Query: 109 QYWMEFTPTSM----MDIPVGQQSVIYNGEIYNQELTEVAELIT-SPEAIKNNLAVAFLT 163 W+ FT S I + + ++N + V E++ +++NNL Sbjct: 88 YVWLGFTGKSAATWIDQINISEIRPVFNSNKSYELANCVNEILALDNLSMENNLRALSCF 147 Query: 164 KIIYQWIC---LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 +I ++ + + + I + L + +V +A + + ++L L Sbjct: 148 FRFLSYIATGTVINIQQANSEKNHYVTQAIQYISHHLS-KVTVESLAHAVNLNRSYLTSL 206 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 F TP EY + R+ A LL+ S+ +VA+ + + F++ FK +G +P Sbjct: 207 FKHDLDLTPSEYIQNFRITKARHLLESSDISIDQVAEQCGYQRTNSFTRVFKRTYGISPR 266 Query: 281 AVLKNTDQHPT 291 + T P Sbjct: 267 QYRQETKIAPN 277 >UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ5_9FIRM Length = 301 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 107/283 (37%), Gaps = 26/283 (9%) Query: 16 YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75 + + E S ISLI + + PRD ++ + + G G Sbjct: 12 FRCLENLKEG--SLDISLIHTGKEHCPPGHICSMPRD--------EFIIHFVLDGTG-FY 60 Query: 76 LKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTP----TSMMDIPVGQQSVI 130 G+ +L + + P + +Y + W W+ F + + + + ++ Sbjct: 61 SAGGQTWSLTPGQMFVIYPNEPVTYGADETNPWTYAWIGFRGIRAHSMVKECGFSKNQLV 120 Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLA--VAFLTKIIYQWICLMYADGKKDPQRRQ--- 185 L + ++ + K N A+L ++ + ++ + + Sbjct: 121 LPAPDQKIILKHIDYMLNHKQLSKANDLRRQAYLILLLAELAGFHEKQSAQNKKNAKYAY 180 Query: 186 -----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 +E I + Q+ ++D+A I S A+L F + G + + + +D ++ Sbjct: 181 STSVYVELAIEYIKDMYQKGIGISDIADNIGISRAYLNSSFQKELGMSAQTFLIDYKMHK 240 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 A SLL SV E+A+ + + D FSKAFK KFG +P Sbjct: 241 AASLLVSTSLSVKEIANNVGYEDQLVFSKAFKKKFGMSPKNYK 283 >UniRef50_A6VAM9 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas aeruginosa RepID=A6VAM9_PSEA7 Length = 293 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 111/285 (38%), Gaps = 14/285 (4%) Query: 5 LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64 L + V+ TP + + + + ++L + Y + H + + + + Sbjct: 12 LPNQGVRFITPPRLRRALARHPLGQACYPLALGY-YPEAH------GHRMQRRTPDDHLL 64 Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP 123 +Y G G + GE++ + G ++ L H+Y + W YW+ F D Sbjct: 65 IYCRAGRGWLECA-GERVEVGGGDLLVLPKGLEHAYGADSQRPWSIYWVHFEGVLAEDFL 123 Query: 124 VGQQSVIY----NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK- 178 SV E + L ++ + + A L + + + + A Sbjct: 124 HPLGSVPRLRLGMQPRLLAEFDALLALRRQGLSLPHFIHAAHLLQGLLTSLAVRPARASL 183 Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 K + I+ + A + A L ++ ++AA S + + TG+ P + ++ ++ Sbjct: 184 KSGRVLDIDAVQALMRAHLHDSLNLDELAAQFKLSRFHFAKTYRALTGQAPIQDFIQMKM 243 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 A LL + V ++A+ L + D ++FS+ F+ G APS Sbjct: 244 AHACRLLDEGALEVRQIAEQLGYADPYYFSRLFRKVVGMAPSHYR 288 >UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D1A4_PAESJ Length = 284 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 12/265 (4%) Query: 35 SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94 + +Y ++P + W+ +YTV G G++ N +T I L P Sbjct: 14 RPYGILIAGYYNETADYAIQRPSGSRDWLLMYTVSGEGQVQKNNQSTVTCGAGDIAVLMP 73 Query: 95 MDIHSYHCEGLVWEQYWMEFTP----TSMMDIPVGQQSVIYN----GEIYNQELTEVAEL 146 H Y +G WE W+ F P ++ + +P + + + G+ + +A + Sbjct: 74 GIPHHYGTKGTSWEFIWVHFIPDPEWSTWLRLPGSDERLFFRHVGKGDSRDSIHEALARM 133 Query: 147 ITSPEAIKNNLAVAFLTKIIYQ----WICLMYADGKKDPQRRQIEKLIATLHASLQQRWS 202 + + ++ L ++ + +I +I +++ L S QR S Sbjct: 134 VRHETSAGSSRLHRRLAEMALEETLIYIQQTCPAESAVTMDPRIAQILRELQLSPAQRIS 193 Query: 203 VADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFF 262 + ++A S + L LF G T RL+ A LL + E+A + F Sbjct: 194 LPELAKKSCLSTSRLSHLFKEQVGDTVLNVLCKIRLEKAAQLLTGTNRQITEIASDVGFD 253 Query: 263 DSFHFSKAFKHKFGYAPSAVLKNTD 287 + +F++ FK FG PS + Sbjct: 254 CTIYFTRKFKETFGETPSTYRRREQ 278 >UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bacteroides plebeius DSM 17135 RepID=B5CYP4_9BACE Length = 297 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 10/268 (3%) Query: 28 SSGISLISLWHT--YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85 + G ++I + + + + K + +V +Y +G G E + + Sbjct: 27 TVGSAIIHPNYESYPPICGHPTEFTFNPSKGRLLPIFVQLYIAKGKGIFFSSPNESMEIK 86 Query: 86 GNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQE- 139 +I + P HSY + W++YW+ F + + + IY I ++ Sbjct: 87 EGDLILIPPYTWHSYLPHKSTGWKEYWIGFDCPHIENCLKHNLFNKNKKIYRIGIQDKII 146 Query: 140 -LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQI-EKLIATLHASL 197 L E A I + E +A + +I+ I + DP I K + L Sbjct: 147 NLYEEAIRIANEEKSGYQQYLAGIANLIFCMIPYYNNNRSFDPATEDIINKAKIIMKEEL 206 Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257 S AA I S +W R++F YTG TP +Y + ++ A L + E+A Sbjct: 207 LNGISPEKTAAQIKLSYSWFRKIFKDYTGVTPSQYIQELKMQEAKICLTTSHIQIKEIAY 266 Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 L + D +F K FK G PS K+ Sbjct: 267 HLGYEDIAYFIKLFKRHTGKRPSEYRKS 294 >UniRef50_A1U2J4 Transcriptional regulator, AraC family n=3 Tax=Marinobacter RepID=A1U2J4_MARAV Length = 306 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 100/257 (38%), Gaps = 9/257 (3%) Query: 38 HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97 + A HYR + ++ + +Y G L GE T+ ++ L Sbjct: 51 YPLAFGHYRRAAGHHMHREHHRDN-LLIYCTDGK-AFLNVAGEPYTVTAGDLLLLPAGVS 108 Query: 98 HSYHCE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEA 152 H Y + W +W+ +T D + I + + L + L++ + Sbjct: 109 HRYTADPDNPWTIHWVHYTGPLAEDFGQYMGFDDSTRIRHLGRQPRLLVDFNGLLSVRQT 168 Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ--IEKLIATLHASLQQRWSVADMAATI 210 + + + Q + + + + Q RQ ++ L + + L++R ++ +A Sbjct: 169 GFRARGLIHASNRLRQLLAAVPINADETSQARQAELDSLHSFMREHLEERLTLNQLAELS 228 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 S A + TG +P +++L +++ A LL S +++ L + D+++FS+ Sbjct: 229 GLSPAHFATRYREQTGTSPIQHFLHLKVERACELLDTTSQSFADISRQLGYDDAYYFSRL 288 Query: 271 FKHKFGYAPSAVLKNTD 287 FK G +P+ Sbjct: 289 FKKVMGKSPTDYRHTAR 305 >UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRK8_PAESJ Length = 284 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 94/256 (36%), Gaps = 14/256 (5%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105 + P P + + ++ Y G G+ L LH + P + Y + Sbjct: 27 QDCDPGHYWGPGLRDMYIIHYVHSGTGQFRLGEL-SYELHAGQGFLIIPGSLVYYKADED 85 Query: 106 -VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160 W W+ + + + I++ V E Sbjct: 86 NPWTYSWVGLKGLHAKSLLQRAGLSPANPIFDATEQKDFFESVYEQCHQALEDHPGSGDL 145 Query: 161 FLTKIIYQWICLMYADGKK--------DPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 F ++YQ++ + A K+ + + I K +A + S SV D+A + Sbjct: 146 FSQSLLYQYMARLVACNKQPSAPAHAVNTKEAYINKAVAFIENSYSLPISVQDIANFVGL 205 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 +L LF G + + + L R++ A+ LL Q ++G++A ++ + D F FSK FK Sbjct: 206 DRTYLSGLFKAQLGVSLQAFLLRFRMNRAVELLHHQELTIGDIARSVGYTDPFLFSKMFK 265 Query: 273 HKFGYAPSAVLKNTDQ 288 G +P + ++ Sbjct: 266 RVIGSSPRTSRDHINR 281 >UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Bacillales RepID=C6IZS2_9BACL Length = 287 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 107/255 (41%), Gaps = 14/255 (5%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWE 108 P + P I + ++ + QG G ++ L + P + SY + W Sbjct: 32 PDHRLGPKIYDYFLLHFVEQGKGTFRTESA-SYELSEGDGFLILPDQLVSYASDVAEPWR 90 Query: 109 QYWMEFTPTSMMDI-----PVGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAVAF 161 W+ FT ++ QQ V G L+ V + + + + L++ Sbjct: 91 YRWIAFTGVKAAELVKRVGFTPQQPVFRQGGNSPIPAMLSSVLQAFQTKKNSSHLLSLGL 150 Query: 162 LTKIIYQWICLMYADGK----KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 L +I+ + + + +R ++++I + + S+ M A++ + A+L Sbjct: 151 LHQIMAEAQETLGMASALPSGESGVQRIVKQMIHYMASQYAHPVSIEQMCASLGYNRAYL 210 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQ-GNSVGEVADTLNFFDSFHFSKAFKHKFG 276 R+F + TG TP Y L R+D + LL+++ S+ ++A ++ D +FS+ F+ Sbjct: 211 SRIFKKETGFTPVTYLLKLRIDKSRQLLRERPELSIEQIAASVGLTDPLYFSRQFRRFHN 270 Query: 277 YAPSAVLKNTDQHPT 291 +PS + ++P Sbjct: 271 ESPSEYRRAVTRNPA 285 >UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FA9_PEDPA Length = 298 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 121/300 (40%), Gaps = 29/300 (9%) Query: 10 VKNETPYNIP-----LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64 +NE + +P VI ++ A H+ + + W+ Sbjct: 7 FENEYLFVLPPVILNNFNFSKVIKLLYITDLGFYPKARYHF-----VHRDRGT--EEWIL 59 Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP 123 ++ G G + E+ + I+ L P H+Y+ + W+ +W F S+ + Sbjct: 60 IFCTHGKGVVKSAT-EEWLIESGSIVLLPPGKEHTYYAFDDDPWDIFWAHFNGDSVNEY- 117 Query: 124 VGQQSVIYNG---------EIYNQELTEVAELITSPEAIKNNLAVAFLTKII-----YQW 169 + Q+++ NG E +++ ++I + A + +V + ++++ Y Sbjct: 118 IPQEALQGNGFLVINKTSTEDMQMLMSQFWQMIQALSAGFSYQSVFYSSQVLGATLAYVS 177 Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229 + + I K + ++ +++ S++ + + S+++L R+F + G + Sbjct: 178 LQSVLPHDSYTMGNEYITKAVKYIYDHFEEKVSLSTLTEVLDVSKSYLSRIFRQTVGTSV 237 Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 ++ LD ++ A LK +V ++A L + D ++FS+ FK G +P K Sbjct: 238 NQFILDIKMKQACYYLKDTNLAVHQIASRLGYDDPYYFSRIFKKVVGSSPRVFRKQEKNR 297 >UniRef50_C5BZM6 Transcriptional regulator, AraC family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BZM6_BEUC1 Length = 291 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 91/271 (33%), Gaps = 17/271 (6%) Query: 26 VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85 S + + + +A H R ++ V + G G+ G + Sbjct: 27 PTSRLLVTDAGYFPHAMNHGRRRTRGTREA-------VVILCTDGVGRCE-AGGRVTEVG 78 Query: 86 GNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIP-----VGQQSVIYNGEIYNQE 139 ++ + P H Y + W +W + V+ +++ Sbjct: 79 AGQVLVIPPGLPHLYWADMHQPWTIWWFHAVGEDVTPFLEAMVCTNAARVVGVHDVFRAT 138 Query: 140 --LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASL 197 + +V + E + + + A + + + G D Q + L Sbjct: 139 GGIEDVVRAMEQDETLPSLVTAAGAAWSVLAQLTADHLSGGAD-QAEPVRAAQEYLRLHF 197 Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257 SV ++A S + LF TG EY R+ A LL +V EVA Sbjct: 198 HLPVSVPELARIAGLSTSHFAALFRAATGSGVSEYVKRLRMSRARELLLTSDRTVAEVAT 257 Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 T+ + D+F+FS+ F+ G +P+ + + Sbjct: 258 TVGYPDAFYFSRQFRRVAGVSPTEYRRAFHR 288 >UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSQ7_PAESJ Length = 285 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 28/281 (9%) Query: 17 NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76 NIP ++ E +W AD Y+V P P + +W +G G I L Sbjct: 18 NIPYVLEELPPQPPCRFQLIWKVQADIAYQVANPTGFSSPGLFATW------EGKGVITL 71 Query: 77 KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM---MDIPVGQQSVIYNG 133 EQ L I + P +Y C W+ Y++EF M +++PVG Sbjct: 72 -GSEQHELVAGTYIIVPPDTPTAYRCLNGNWKFYFLEFDSLDMALGLNLPVG-------I 123 Query: 134 EIYNQELTEVAELITSPEAIKNNLAV-----AFLTKIIYQWICLMYADGK---KDPQRRQ 185 + ++ E A + E + NNL + A+ + + Q + L++A + + + + Sbjct: 124 PVSTAKMAEAARM---NERLINNLIMKPAGYAYDSHLAMQELLLLFARERHANRSGRHPE 180 Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 ++ ++ +H ++ Q + + S F TG +P +Y + +L A + L Sbjct: 181 LDDILYRMHQTIGQAFPIEKWVQQSGLSRNAFFTRFRERTGMSPNQYMQELKLAAAKTSL 240 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 + SV E+A L F+D FHFSK FK ++G +P A ++ Sbjct: 241 ETTQASVKEIAAALQFYDEFHFSKLFKKRYGMSPRAYRRDA 281 >UniRef50_A9KKI4 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KKI4_CLOPH Length = 261 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 95/252 (37%), Gaps = 11/252 (4%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 + P I + ++ ++G G +G TL + P +I Y Sbjct: 9 SGWEECEAGHFFGPAIRHHYLMHIILKGRG-FYQASGHTYTLGKGQAFLIYPEEITYYQA 67 Query: 103 EG-LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 + W W+ F + + + I ++++ ++ +L+++ +N Sbjct: 68 DKKEPWIYAWVSFDGPDVEKLLDQTCFRMNRYVSPAIIRDRDVKKIQDLLSAFHQHDSNP 127 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 L Y+ + L Y + +K Q RR EK + + + + D+A + Sbjct: 128 ID--LEGCFYRVLALFYGETEKGTQQYERRYYEKAVEYIEQNYGYPLKIGDLAGYVGIDR 185 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 +L ++F+ + PK+Y RL A+ +L + SV E A + F D+ F K K Sbjct: 186 TYLYKIFMEFAKCAPKQYLQQFRLKEAMGMLSEGKFSVTEAAYSCGFHDAAAFCHVMKKK 245 Query: 275 FGYAPSAVLKNT 286 G P + Sbjct: 246 TGMTPLEFQASQ 257 >UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KWQ1_9FIRM Length = 311 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 12/252 (4%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLV 106 P + P N ++ G G + + NGE L L P Y + Sbjct: 46 CVPGHRYGPNKRNLYLLHVVYSGVGTLFV-NGEYYHLSKGNAFLLYPHVEAWYEADLTEP 104 Query: 107 WEQYWMEFTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156 W +W+ PVG + N +Y ++ + + + ++ Sbjct: 105 WSYFWIGVRGVDADSFFTEVGFSKEKPVGIVHQMDNLLLYINKILQKQDYTIEEQLSRSA 164 Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216 F ++ + G ++ A L + S++ +A + A Sbjct: 165 YMHLFFANLLRGKQEEAHWGGPLKDLGSHSARVRAYLDEHYHEDISISALAKEMGIHRAH 224 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 L F + TG +PKEY L R+ A ++L++ G S+ E+A + + D FSK F+ K G Sbjct: 225 LFNSFKKDTGYSPKEYLLYIRMQNAKAMLRRTGKSIAEIAYMVGYHDPLSFSKIFRQKIG 284 Query: 277 YAPSAVLKNTDQ 288 +P ++ Sbjct: 285 VSPLQYRNMKEE 296 >UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7P4_RUMGN Length = 253 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 101/254 (39%), Gaps = 14/254 (5%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104 + P P + N ++ ++G G E+ + + P + Y + Sbjct: 1 MQDCPPSYSFGPAVRNCYLLHLCLEGEGVFYSGE-ERYPIKQGQGFLIHPGKLTFYQADS 59 Query: 105 L-VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159 + W W+ + ++ I++ + + + +++ N Sbjct: 60 VNPWSYLWVGIGGHDAEKYLRLAGLSARNPIFSCTQIDTAKSYILDMMKHHALSAAN--E 117 Query: 160 AFLTKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 ++ I+ Q++ L+ D +++ I + I+ +H + Q +V ++A + + Sbjct: 118 IYIQGILMQFLALLVEDAGCTVSPQQNTSSVYINQAISYIHKNYQNPLTVQEIADYLSLN 177 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 ++L LFL+ +P+++ R+ + LL+ S+ +A + + SF FSKAF+ Sbjct: 178 RSYLTELFLKTVQLSPQQFLTRYRITKSEELLQSSSLSIQNIAYSCGYSSSFSFSKAFRK 237 Query: 274 KFGYAPSAVLKNTD 287 G +PS K Sbjct: 238 VNGLSPSEYRKQKR 251 >UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales RepID=Q64XT7_BACFR Length = 318 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 16/257 (6%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 +Y + +++ + +V +Y +G G L +G++ + N L H+Y Sbjct: 59 GYYPKAYNHFRERDTPIDQYVFIYCTEGRGWFSL-DGQKHPVVPNQYFILPAGLPHAYGA 117 Query: 103 E-GLVWEQYWMEFTPT-----------SMMDIPVGQQSVIYNGEIYNQELTEVAELITSP 150 + W YW+ F T + DI G S I +E+ V ++ S Sbjct: 118 DEKEPWTIYWIHFGGTLAPLYCTHRTCRLTDIKPGMHSRISYRTELFEEIFRVLKMGYSL 177 Query: 151 EAI--KNNLAVAFLTKIIY-QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMA 207 E + +++ +L + Y + +++ + + + I + +L ++ ++A++A Sbjct: 178 ENLSYASSVFHHYLGSLRYLREYREAFSEHRPAGEEDPVNAAIHYMKENLGKKLTLAELA 237 Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267 S ++ LFL+ TG P Y+ ++ A L V +V + D+++F Sbjct: 238 DYTGYSSSYFSNLFLKRTGYAPLSYFNQIKIQKACQFLDFTDMKVNQVCYRVGIEDAYYF 297 Query: 268 SKAFKHKFGYAPSAVLK 284 S+ F G +P K Sbjct: 298 SRLFSQIMGMSPREYKK 314 >UniRef50_C7PUR1 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PUR1_CHIPD Length = 301 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 111/295 (37%), Gaps = 18/295 (6%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 + + + +P I+ + ++ L+ T +Y K+P + + + Sbjct: 8 KREGFEGQQLIVVPRKISADFLTQDPITRQLYIT-DIGYYPKARYHYIKRPSGISQHIII 66 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTP---TSMMD 121 Y ++G G I + + +++ + + + + H Y E W YW+ F ++ Sbjct: 67 YCIEGKGWIEI-DKKRVDVLPSQFVIIPANTPHKYLSEEQEPWTIYWIHFKGEISAYIVG 125 Query: 122 IPVGQQSVIYNGEIYNQELTEVAELI---------TSPEAIKNNLAVAFLTKIIYQWICL 172 + + + YN+ + E I N + FL+ ++Y+ Sbjct: 126 LILQRAKNFRLHLTYNENRIRLFEDICINLQKGYGDDNLRYVNMIFNHFLSSLLYEE--- 182 Query: 173 MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232 + ++ ++ I + I + L Q ++ + + S + +F TG +P EY Sbjct: 183 KFNHAGQEERQDIIGQTITMMQEKLDQLITLQEFSQYAGLSVSHFSAVFREKTGYSPIEY 242 Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 + ++ A L +V E+A L D ++FS+ F G +PS Sbjct: 243 FNHLKIQKACQYLLFSAATVKEIAVRLGVEDPYYFSRMFSKLMGMSPSEYRNRNK 297 >UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KND9_9FIRM Length = 298 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 98/254 (38%), Gaps = 12/254 (4%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 + V P + P + + + + + G G N LH ++P +Y + Sbjct: 23 GHSVTGPGHRYGPAVRSYHLIHFILAGKGTFQ-ANQHTYCLHAGQGFLIEPDYQTTYESD 81 Query: 104 -GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN----LA 158 W W+ F + +I + + IY + A+L + + + L+ Sbjct: 82 AKEPWTYIWVAFNGSRAAEI-IASLRLSQADPIYTCTKEQGAKLAAYVQDMLAHNSFTLS 140 Query: 159 VAFLTKIIYQWICLMYADGKKD-----PQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 + + + A+ ++D I + + L++ ++V ++A + + Sbjct: 141 GRYYRLGLLMQFLSVLAEAQRDLLPPADNNAYISHMTNFIRTHLEEPFTVQELADYMNLN 200 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 +++ LF RY +P EY + RL A LL+ SV +A + + S F +AF Sbjct: 201 RSYVTTLFKRYLHCSPHEYIQNCRLTKARHLLETTTFSVESIAYSCGYAKSDSFQRAFLR 260 Query: 274 KFGYAPSAVLKNTD 287 K G P+A + Sbjct: 261 KAGMTPTAYRRQQQ 274 >UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EI06_PEDAC Length = 280 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 111/281 (39%), Gaps = 12/281 (4%) Query: 10 VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69 + N+ ++ +L++ + +S+ + + Y P + + + WV Y + Sbjct: 1 MNNQFTEDVSILVDNDPLSAEFHIYEVG-------YEKCQPTKPFEYIPIDYWVLHYVMD 53 Query: 70 GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPT----SMMDIPV 124 G G N + L L + Y+ + W W+ + + I + Sbjct: 54 GKGYFSAGNSDLQHLSAGDTFLLPANCPNIYYPDKADPWTYVWVGISGELTAKYLAQIGL 113 Query: 125 GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR 184 +++ + N I + + + + +N +++ + ++ +A+ + ++ Sbjct: 114 SRRNFVINASIDKTKEMLFNHVYQAFKDKQNFQSLSAVYSLLDYLQQENHANNPVNQGKQ 173 Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +K++ + + +++ +AA ++L +LF RY GK P +Y +L A SL Sbjct: 174 IFDKILLYVDENFASGLTISQIAANNNVDRSYLYKLFQRYLGKKPSQYVHQLKLQKACSL 233 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 L++ ++ +++ F S +F+ F + P Sbjct: 234 LRKSSLNITQISQECGFSSSAYFTNVFAKEMNSTPLKYRNR 274 >UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM61_9FIRM Length = 252 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 91/238 (38%), Gaps = 17/238 (7%) Query: 67 TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDI--- 122 +G G + + TL + + Y + W W+ F S + Sbjct: 2 VQEGRGYLEMGEA-HYTLEKGDVFLIPEGVEAWYEADKETPWSYRWIGFEGVSARECLES 60 Query: 123 -------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 PV + + Y ++ + +L E +N L + ++I + Sbjct: 61 AGFTPQKPVRKVRCLDKVGGYIDQMLKCHQLYYENELKRNALLMLVFAELITDNRKNLAG 120 Query: 176 DGKKDPQRRQ-----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 GK + R +E I ++ + +R + ++A I + ++L F G +P+ Sbjct: 121 MGKYPSEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQENIGCSPR 180 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 EY + R++ A +LLK V EVA + + D FSK FK + G +P + + Sbjct: 181 EYLMKLRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYKEEKSR 238 >UniRef50_A4XS27 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XS27_PSEMY Length = 293 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 108/278 (38%), Gaps = 14/278 (5%) Query: 12 NETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGC 71 TP + L+ + +SSG +++ Y D + + L + + +Y G Sbjct: 19 FITPPRLRRLLVRHPLSSGCYPLAMG-FYPDA------AGHQMRRLQPDDHLLIYCRSGR 71 Query: 72 GKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP-VGQQSV 129 G + +G + ++ L H+Y +G W YW+ F + D + Sbjct: 72 GWLDATDGR-FEVAAGDLLLLPKDVPHAYGADGHSPWTIYWVHFDGSLSEDFLRLLGAQT 130 Query: 130 IYNGEIYNQELTEVAELITSPEAIKNNL----AVAFLTKIIYQWICLMYADGKKDPQRRQ 185 + + + L + L+ N L A L ++ L K + Sbjct: 131 LRRIGVQPRLLGDFEALLGLQRQGLNALPFIHAAHRLQAMLSSLAVLPARVSLKSGRVLD 190 Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 IE + A + A L ++ ++AA S + + TG P + ++ ++ LA LL Sbjct: 191 IEAVQAVMRAHLHGNLNLDELAAQFKLSRFHFAKTYRALTGHAPIQDFIQLKMALACRLL 250 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 + V +VA+ L + D ++FS+ F+ G APS Sbjct: 251 DRGDIEVRQVAEQLGYEDPYYFSRLFRKVVGMAPSHYR 288 >UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8K8_9CLOT Length = 299 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 117/284 (41%), Gaps = 29/284 (10%) Query: 27 ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86 S L + YA + Y +S++ +YT+ G G I + +G +I ++ Sbjct: 24 TSLPFYLTEVGKFYAGKGYYTER-------SDKDSYLILYTISGRGSITV-DGNEIDIYA 75 Query: 87 NCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAE 145 + +F+ Y E W W T + S++ G + +++++ A+ Sbjct: 76 HNAVFINCNSHQFYKTESDVPWVFLWAHINGTGVEPY----YSLVNVGRVSQEKISDYAD 131 Query: 146 LITSPEAIK-----------NNLAVAF--LTKIIYQWICLMYADGKKDPQRRQIEKLIAT 192 + E I +NL+V L II + + K + I + Sbjct: 132 FVELFEEILITSKFNDVRTLSNLSVNLQRLLSIILKSRLSSSNNKKHESHIADIRSSVDY 191 Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 + + +++ S+ D+ I S+ + RLF +Y G TP +Y ++ R++ A LL + Sbjct: 192 IRKNYKRQISIDDIIHRINISKYYFIRLFKQYMGTTPYDYLINYRINQAKILLNSTSMPI 251 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT---DQHPTDA 293 G+++ + F D +F FK + G P+ +T + P DA Sbjct: 252 GDISQEVGFLDESNFISHFKRQTGIKPTEYRNSTLGFHRPPKDA 295 >UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulatory protein n=15 Tax=Bacilli RepID=Q4V1B1_BACCZ Length = 301 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 14/257 (5%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 + P P + NS++ + G GK +K ++ +L + + P + Y Sbjct: 23 CGFSKTLPFHAFGPAVRNSYIIHVVLDGKGKYYVKE-KKYSLKKGDLFLIPPGESTFYRS 81 Query: 103 E-GLVWEQYWMEFTPTSMMDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 + W W+ F +I + Q L + E + + N Sbjct: 82 DAEEPWLYAWLSFGGKVAEEIINFSNFKDDNYAVTSTNIQQYLEIILECMNCSYSTLENE 141 Query: 158 AVAFLTKIIYQWICLMYADGK------KDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211 L ++ Y+++ L DG K R + + + + +V+D+A + Sbjct: 142 LK--LNELTYRFLRLFLTDGSSLSPGVKQKFSRLAIEAMIYIGKHYIEEITVSDVANHLA 199 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 + + L R+F + G + K++ + R++ A LL SV ++ + F FS+ F Sbjct: 200 VNRSHLSRVFQNHFGISMKDWIIRMRINHAAYLLSMTNESVENISYQVGFHSLAAFSRIF 259 Query: 272 KHKFGYAPSAVLKNTDQ 288 K P+ K + Sbjct: 260 KKVTKETPTHYRKRMSK 276 >UniRef50_C6XV52 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XV52_PEDHD Length = 298 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 114/291 (39%), Gaps = 11/291 (3%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 MN + + +P + V LI + A +Y D+++ + Sbjct: 5 MNVRKIKEGFLGQQMIVLPPDTKKVVTK--NPLIRGLYLTAIGYYPKAIHHDRERKTGSQ 62 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPTSM 119 ++ +Y +G G + + ++ L N I + H Y E W YW+ FT Sbjct: 63 QYIFLYCTEGRGYVEIL-KQRFELVPNTYIIIPKNIAHHYCTSESDPWTIYWIHFTGEHA 121 Query: 120 MDIP---VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI-IYQWICLMYA 175 + + Y+++ TE L+ S + LT I + Q++ Sbjct: 122 DQLYSRYAKDTAPEVQTIAYDEQRTEQFNLMLSLLENNYSTRNIELTNIKLLQFLSSFIY 181 Query: 176 DGKKDPQRRQIEKL---IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232 + P ++++ I + +L + +++ ++AA S + LF + TG +P +Y Sbjct: 182 HEEMYPSHYSVDQVSISIKFMKENLTKCYAIQELAAHSNYSVSHYSDLFKKKTGCSPMQY 241 Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 + ++ + L ++ E+ + F D ++FS+ FK G +P+ Sbjct: 242 FNQLKIQKSCQYLYFTDMNIKEICVKIGFDDPYYFSRMFKKLMGSSPANYR 292 >UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWJ7_9GAMM Length = 293 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 107/290 (36%), Gaps = 21/290 (7%) Query: 10 VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69 V+ TP + + + ++ ++ + A +R+ R + + +Y Sbjct: 14 VRFITPTFMLEKLARHPLTKDCYPTAMGYYPAASGHRMQRERH-------DDNLLLYCTS 66 Query: 70 GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSM--------- 119 G G++ + + + I+ L H+Y +G W YW+ F S Sbjct: 67 GRGQLTVGD-WHSQVTAGHIMLLPQGLAHTYEADGDDPWTLYWVHFQGASTRVFMQYLGY 125 Query: 120 -MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178 D P+ V L EV S A N A L +I Q + A Sbjct: 126 REDRPLTNAGVSPLLIGAFTNLLEVRRTGYSTRAFIN--ASNHLRHLITQMSMEISAHAG 183 Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 + +++ + A + + Q ++ +A S+ + TG P +++L+ ++ Sbjct: 184 RLQSGFELDHVQAYMLEHIDQTITLDALAQVANMSKYHFSNRYKTLTGYPPIKHFLNMKM 243 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 + A LL V E+A + + D +FS+ F G +P +T + Sbjct: 244 EHACHLLDSTDMGVSEIARGVGYDDPLYFSRLFSRTVGSSPRGYRSSTRK 293 >UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=A9QSR3_LACLK Length = 289 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 98/244 (40%), Gaps = 11/244 (4%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWE 108 P P I ++V Y G G+ ++ G + L + Y + L W Sbjct: 25 PNFSFGPAIRENYVIHYITSGSGRYMIY-GFEHQLKAGDCFIIPADVETFYQSDALTPWA 83 Query: 109 QYWMEFTPTSMMDIP----VGQQSVIYNG---EIYNQELTEVAELITSPEAIKNNLAVAF 161 YW+ + + D+ + + I + + +++ LI+ + + Sbjct: 84 YYWLGLSGHVVNDLFARTALDDKGWILENVSKTEFIEHFSKIQNLISDDDKTVDLDIQVE 143 Query: 162 LTKIIYQWICLMYAD--GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 L ++ I L K+ EK ++ + Q + D+ A + S A+L Sbjct: 144 LFALMKSLITLFPKSITEHKNQSDYYAEKAYTFINQNYSQSIKIKDVLAHVMISRAYLFT 203 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +F G +P++Y +D R+ A LL N V ++++ + F DS FS AFK ++G +P Sbjct: 204 IFKHKYGLSPQKYLIDLRMAKAAMLLIHSDNLVSQISEAVGFSDSLSFSSAFKKRYGVSP 263 Query: 280 SAVL 283 + Sbjct: 264 TKFK 267 >UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=C7H3E2_9FIRM Length = 306 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 100/241 (41%), Gaps = 12/241 (4%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWMEFTP 116 + +Y G E++ + ++ +P +I Y + E E +W+ FT Sbjct: 65 RRDYQILYVASGKAHFWFDGVEEV-VTSGHMVLYQPKEIQKYVYYVEDHP-EVFWIHFTG 122 Query: 117 TSMMDIPVGQQSVIYNGEIYNQELTE--------VAELITSPEAIKNNLAVAFLTKIIYQ 168 + +I + Y+ L + + EL ++ +A F + Sbjct: 123 YDVKNILNYHGIPLDKHVFYSGTLPDYKMLFRKIIRELQQCEYGYEDYIASLFNIILFLV 182 Query: 169 WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 ++ +IE +A + + + SV D A ++ S W R F +Y + Sbjct: 183 SRQQQESEKTTTSIPEEIEAAVAYFNENYNTKVSVDDYAESLHISTNWFIRNFKQYMKIS 242 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 P +Y L R+ A SLL+ ++GE+A+ + + + +FS+ FK ++G +P+ KN ++ Sbjct: 243 PAQYILSLRMVNAQSLLENTEYNIGEIAEIVGYDNPLYFSRVFKKEYGVSPAQYRKNLEE 302 Query: 289 H 289 Sbjct: 303 S 303 >UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Bacillales RepID=C6IVE8_9BACL Length = 289 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 104/257 (40%), Gaps = 22/257 (8%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWE 108 P + P + + ++ +G G G++ + + P + +Y + W Sbjct: 33 PNHRIGPSVHDYFLLHTVFEGKGTYTW-GGQEYSCRTGDTFVIFPEGLFTYEADSLDPWH 91 Query: 109 QYWMEFTPTSMMDIPV-----GQQSVIYNGEIYNQELTEVAELITSPEA------IKNNL 157 W+ + ++ + V+ +GE +EL E+ + S +++ Sbjct: 92 YAWVALRGSGVLRQLADVGITPDKPVVSSGE--PEELRELYARLRSSFRQSDHPHLESLE 149 Query: 158 AVAFLTKIIYQW----ICLMYADGKKDPQ--RRQIEKLIATLHASLQQRWSVADMAATIP 211 A ++T +++ + + K+P RQ+E+ I Q+ + ++A + Sbjct: 150 AAGWVTLLLHHFGVANREHLPRSAAKEPAMIDRQVEQAIRWFQLQYPQQIGIEELARNLG 209 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 A L F TG +PK+Y R++ A LL ++ ++A ++ F D+ +FS+ F Sbjct: 210 YHRAHLFSAFKARTGLSPKQYLTKVRIEKAKELLA-GPLTIDQIASSVGFNDALYFSRQF 268 Query: 272 KHKFGYAPSAVLKNTDQ 288 K G +PS + Sbjct: 269 KKSTGKSPSEYRHGNGR 285 >UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36471 Length = 287 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 101/274 (36%), Gaps = 13/274 (4%) Query: 17 NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76 N+ + +N+ SL + P ++ + ++G G Sbjct: 4 NMIEIFRKNISGESSSLSFGYA-----GREQCMGSHSFGPARRAHYLIHFIIKGKGVFFA 58 Query: 77 KNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVG---QQSVIYN 132 + ++ L + ++P + Y+ + WE W+ F + I S + Sbjct: 59 DD-KKYILKQRDMFLIRPGETTFYYADEVDPWEYAWVAFVGSDAAQITESCGFAYSPVAT 117 Query: 133 GEIYNQELTEVAELITSPEAIKNN--LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLI 190 + + + ++I + N ++ L I Y ++ + + + + + + Sbjct: 118 YPDSPELIESIDDIIHHMQTGDENDYYLLSRLYNIFY-YLSKPVINTQNTYKNEIVRRTV 176 Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250 + +S ++ ++ +A + +L RLF G PKEY R+ +A +L Sbjct: 177 NLIRSSYFEKLTIQWLADQVRVDRTYLYRLFKEEVGICPKEYLTQYRIRMATVMLSTTNQ 236 Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 S+ E++ F D+ FS FK G+ P K Sbjct: 237 SIKEISYACGFTDTSLFSICFKKYLGFTPQQFRK 270 >UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D1W6_PAESJ Length = 264 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 116/268 (43%), Gaps = 19/268 (7%) Query: 32 SLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIF 91 + + H +E Y ++ +P W+ VYT++G G GE+I ++ Sbjct: 7 NGVVTGHFLENESYCMV------RPAGREDWLLVYTLEGEGFFRTPAGEKIC-KAGELVL 59 Query: 92 LKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQQSVIY---NGEIYNQELTEVAELI 147 L+ H+Y +G W W+ F + + ++ ++ + E+ + + L+ Sbjct: 60 LRKRVPHTYGTVKGDTWNFLWVHFNRLPELSLLPDEEVLLCPLPSSELQRRVIRIFRSLL 119 Query: 148 TSPEA---IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVA 204 A L L+ +I L+ A D ++ +++ L A +Q+ S+ Sbjct: 120 HDSRAQGGFWEELCDNQLSALI-----LLMAGQLADKLDYRVSQVMRILSAQMQEPLSIN 174 Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264 ++AA + S + L LF TG++ + + RL+ A+ L+ Q G + GE + + F Sbjct: 175 ELAARVGLSASRLSHLFKSETGRSIVDTLNNMRLEQAVLLMLQAGRTAGEASFDVGFQSY 234 Query: 265 FHFSKAFKHKFGYAPSAVLKNTDQHPTD 292 HF+ F+ ++G P+ + T+ T Sbjct: 235 NHFAALFRRRYGCGPAEYKRKTESTSTP 262 >UniRef50_C6IY48 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY48_9BACL Length = 315 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 108/301 (35%), Gaps = 34/301 (11%) Query: 12 NETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGC 71 P + +N + ++ + + + H+ +++P A++ + +Y V+G Sbjct: 17 FVQPDYMLKELNNSTLTRPLFVSDIGFFPNARHH------YRERPEGADAHIFIYCVEGE 70 Query: 72 GKILLKN-----------------GEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWME 113 G + + L + + H Y W YW Sbjct: 71 GWVEWSEEPTDGRPDRSGTTTSKMQQSYPLTERQLAVIPAHKPHRYGASTDKPWSIYWFH 130 Query: 114 FTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITS--PEAIKNNLAVAFLTKIIY 167 + + Q + + +L E E + + + + + Sbjct: 131 LQGEDTNALIHTYGLDQGGPVRLPLSVHAQLLEHFEQCYRLLHDKHYSLPVQIHVAQTMR 190 Query: 168 QWICLMYADGKKDPQRRQIEK----LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 + + ++ Q R+ E+ + + L + +++++A + S+ L LF R Sbjct: 191 HLLSSIGLSAERSAQDRKRERYFDEAVRYMTERLTENLTLSELAKQVGLSKQHLVYLFNR 250 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 G P EY+L ++ A LL G SV E+A + D ++FS+ FK GY+P+ Sbjct: 251 EAGLPPIEYFLRLKMQRAGQLLDLTGLSVKEIAGAVGLSDPYYFSRLFKKIMGYSPTEYR 310 Query: 284 K 284 + Sbjct: 311 R 311 >UniRef50_B0MR70 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR70_9FIRM Length = 290 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 91/247 (36%), Gaps = 17/247 (6%) Query: 49 WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWE 108 W N A+Y +G G +L+ NGE+ ++ F+ H Y+ W+ Sbjct: 43 WQYHVICGNGDNYAKALYCTKGSG-VLIMNGEKHIINPYTAFFIPAGCPHEYYSTDESWD 101 Query: 109 QYWMEFTPTSMMD------------IPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156 +W++ + S D P+ ++ + Y + + E + S + N Sbjct: 102 THWIKPSGKSCTDMLKALGFDKPKIFPLPKEEITYLDRCFRC----MHEALLSDKVDGNF 157 Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216 A +L + L + K IA + + ++ + ++ S Sbjct: 158 RASGYLYSFFIELSRLAAKGKGSVQIAPAVTKAIAYIDENYMKQPGLESISKAAGVSSQH 217 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 L RLF + P EY ++ A LL + +V ++A+ F DS +F K FK Sbjct: 218 LCRLFRQTLNCRPMEYITKRKIQAAKMLLAETRKTVEQIAEETGFCDSSYFCKIFKRFES 277 Query: 277 YAPSAVL 283 PS Sbjct: 278 ITPSQFR 284 >UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=bacterium Ellin514 RepID=B9XJ41_9BACT Length = 295 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 103/277 (37%), Gaps = 24/277 (8%) Query: 19 PLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKN 78 PLL + +G + H R K P + + +Y +G G + Sbjct: 30 PLLQHLLPTDAGYYPTAKGHVCV---------RRKGCPEV----IFIYCAKGNGWCEIA- 75 Query: 79 GEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNG 133 G + + N ++ + H Y + W +W ++ + + V ++ + Sbjct: 76 GRKHQISKNQLLVINAFTPHVYGADKNSPWTIHWFHAVGSNVSVYLDKLGVTEEKPVVPL 135 Query: 134 EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-----DPQRRQIEK 188 Q + E++ S E + + + + L+ + R ++ Sbjct: 136 GGDVQLFSLFEEVLESLEHGFTPTHLIYAAHSLTHLMGLILRHKDEFGYGETSVRERMAN 195 Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 I + L++ ++ +AA + S + F R TG P Y R+ A+ LL Sbjct: 196 SIEFMKGHLREPLNIVTLAALVNLSRSHYSTSFRRVTGYAPLSYLNHLRMQRAVQLLNAT 255 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 S+ E+ D L F D F+FS+AF+ ++PS + Sbjct: 256 ELSIKEIGDQLGFSDQFYFSRAFRKVHNHSPSEHRRR 292 >UniRef50_A5ZSJ3 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A5ZSJ3_9FIRM Length = 287 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 102/261 (39%), Gaps = 16/261 (6%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL---KNGEQITLHGNCIIFLKPMDIH 98 Y P P + N ++ Y + G G + + + + + ++P I+ Sbjct: 25 QYGYEKCEPLHSYGPFVRNHYLFHYIISGKGMLSVTEKDDNAVYHMEAHSGFLIEPGRIN 84 Query: 99 SYHCEGL-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI 153 Y + WE W+EF M + + +++ I + ++ + + Sbjct: 85 LYSADQKFPWEYVWVEFDGLRAKELMEEAGLSNDHPVFH-PISDTAADKLRDEMLRLTQY 143 Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIATLHASLQQRWSVADM 206 +N + +Y + + + R ++ ++ + + +V DM Sbjct: 144 PDNSRPLGIIGQLYLIMDALIQGSSNKKRLQGGKLSRFYAQEALSFIEQNYALPITVEDM 203 Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266 A ++ ++F G++P+++ + R+ A SLL S+G+++ + + + H Sbjct: 204 ANRCNLDRSYFGKVFKDMIGQSPQDFLIRYRMSKATSLLTSTSLSIGDISVQVGYPNQLH 263 Query: 267 FSKAFKHKFGYAPSAVLKNTD 287 FS+AF++ +G +P + Sbjct: 264 FSRAFRNIYGMSPRQYRQQNK 284 >UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36461 Length = 276 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 86/242 (35%), Gaps = 7/242 (2%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLV 106 P + + + + ++G G G Q + ++P ++ Y + Sbjct: 11 CEKGHFFGPAVRSHQLIHFVLKGKGIYRTGYG-QYEIKEGEAFLIRPGEVTYYQADFEEP 69 Query: 107 WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAE-----LITSPEAIKNNLAVAF 161 W W+ F + E+T V+ L A +N V Sbjct: 70 WSYAWIAFDGDGAEALLERYYPDHSFPVCAMGEITAVSGWFEGLLGAFGSAEENRERVLG 129 Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 +I + G + ++ +A + + ++++A + +L R+F Sbjct: 130 YFYLIMACLLRSGKGGVPVDEEGYFKRAVAFIRHNYSYPIQISEIAGYVGIDRTYLYRIF 189 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 + G +PK+Y RL+ A +L Q + E+A + + DS F + F+ G AP+ Sbjct: 190 MHQAGVSPKQYLSRYRLEEAKEMLVQTEYRITEIAYSCGYHDSSSFCRHFQKATGNAPAR 249 Query: 282 VL 283 Sbjct: 250 YR 251 >UniRef50_C9AKD6 AraC-type DNA-binding domain-containing protein n=3 Tax=Enterococcus faecium RepID=C9AKD6_ENTFC Length = 286 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 94/253 (37%), Gaps = 11/253 (4%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 Y PR P I ++ ++G G + + + L + P Y Sbjct: 25 CGYSKTEPRHSFGPAIREQYLIHILLEGEGYYSINDQK-YFLKKGQGFVIPPGVSTFYQA 83 Query: 103 E-GLVWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPE-----A 152 + W W+ + + +I VG+ + + E N + E ++ + Sbjct: 84 DEKNPWSYVWLGLSGNLVEYYLKEIGVGKNHLTFKVENLNSFKGLIFETLSYDQDNLVSE 143 Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 + V +++ + + + I + + Q+ SV D+A ++ Sbjct: 144 LSRQKQVYKFLELLLNSASYLNEGIITKKMNPFVRQTIEIIRENAYQKLSVKDIAVSLSI 203 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 E +L RLF G + KEY + ++ +A LL S+ +++D + F FSKAFK Sbjct: 204 HENYLSRLFKNDMGISIKEYISEIKISIANDLLSSTEYSIQQISDKIGFSTVQSFSKAFK 263 Query: 273 HKFGYAPSAVLKN 285 G +P K Sbjct: 264 KANGVSPGVYRKR 276 >UniRef50_B0MEA0 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEA0_9FIRM Length = 292 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 93/265 (35%), Gaps = 29/265 (10%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LV 106 P P + + + Y V G G + +Q T+ + P ++ Y + Sbjct: 25 CTPLYSFGPAVRSHHLLHYCVSGKGYYYAGD-KQYTIEPGDAFLILPDEVTFYQADEQDP 83 Query: 107 WEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNN--LAVA 160 W W+ F+ + D + + +I + E ++ + +++ +N Sbjct: 84 WTYLWVGFSGNQVNDYLQRCGLDSEHLICHCEEKELLVSYIEDILRHNTLSYSNEIYIQG 143 Query: 161 FLTKIIYQWICLMYADGKKD--PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218 L I + K D + I K I + + Q +V D+A + + ++L Sbjct: 144 ILFLIFASFSRSADIKYKSDFTSENIHISKAIEFIQKNYQNVITVRDIADYVSLNRSYLC 203 Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH----- 273 +F +P+++ L R+ A LL V ++ + + + FSKAFK Sbjct: 204 SMFQENLHMSPQQFLLRFRVTKATELLSDTDLPVKNISYSCGYANQLAFSKAFKKNYRFK 263 Query: 274 --------------KFGYAPSAVLK 284 G+ PS K Sbjct: 264 SHGLPQRKPECSEYYTGFRPSQSRK 288 >UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDF7_9BACT Length = 274 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 114/272 (41%), Gaps = 9/272 (3%) Query: 25 NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84 +++ +G +LIS TY + D + + + + + +G G I + + T+ Sbjct: 2 DILGAGSALISKGDTYPPSIHPSDHYFDWMRGRVLDEFQLLLITKGSGTIETEATDSFTI 61 Query: 85 HGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP----VGQQSVIY---NGEIY 136 + L P H Y + W ++W+ F T ++ + + + + E Sbjct: 62 TAPIVFLLYPGVWHRYRPSQDTGWHEHWIAFRGTFADELLRSGLISPEKPFHKTGHSETL 121 Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-MYADGKKDPQRRQIEKLIATLHA 195 ++ + + + + ++A A L +I+ I L + + P R+ I + + Sbjct: 122 LAQVQLIQDEVRAEAHGYRSIAAAALMQILALAITLPQRREEENQPMRKVIRRACFLMRE 181 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 + ++AA + + RR+F ++TG +P Y+ RL LL+ NS+ E+ Sbjct: 182 RSDRPLMPEELAAELNIGYTYFRRMFRKFTGISPNRYHAQLRLRRVKRLLRDTSNSIVEI 241 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 AD L F +H S FK + G +P K+ Sbjct: 242 ADVLGFNSPYHLSNWFKKETGRSPQHWRKDPQ 273 >UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=Yersinia RepID=A4TH83_YERPP Length = 292 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 95/258 (36%), Gaps = 9/258 (3%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 H R ++ +A ++ + G G I L+N GN + Sbjct: 33 GHIRAADNFHVRRQSVAGH-ELIFCLNGSGFIRLENNLHEVKKGNLAWLPVRWPHEHFPN 91 Query: 103 EGLVWEQYWMEFTPTSMMDI----PVGQQSVIY--NGEIYNQELTEVAELITSPEAIKNN 156 + WE W+ + +I V QQ V + E + +L+ S + + Sbjct: 92 KQEPWEILWLRIDGAKLNNIMQILDVAQQPVFEFTSPETITDIYHRLFDLMQSHTLVADA 151 Query: 157 LAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 +++IY + D K P R + +LI +H+ W + S+ Sbjct: 152 HCDVLCSQLIYTLLENRSFDATKSPVISHRGLGRLIYQIHSHYNDDWDIDKFMQYCQVSK 211 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 + L RLF ++P + + RL A LL + ++ +A + + D HFS+ F Sbjct: 212 SQLFRLFQETFNQSPLRWLKNYRLSQARRLLVETEETISRIAGLVGYNDPLHFSRDFHRS 271 Query: 275 FGYAPSAVLKNTDQHPTD 292 G +PS + Q D Sbjct: 272 VGLSPSDFRRQERQLDND 289 >UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S939_9FIRM Length = 291 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 106/286 (37%), Gaps = 22/286 (7%) Query: 19 PLLINENVISSGISLISLWH------TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72 P + + S L ++ YA +H+ S++ YT++G G Sbjct: 10 PESVWKRTTPSEAELAQPYYCTEAGVFYAQQHFSTAR-------TDKESYILFYTLRGAG 62 Query: 73 KILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWMEFTPTSMMD-----IPVG 125 I + L + L SY W YW+ + +P Sbjct: 63 LIEQGES-HVVLSTGQALLLNCRTPQSYCTAPGQSCWHHYWVHLDGAGVAAMEPLLLPGK 121 Query: 126 QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF-LTKIIYQWICLMYADGKKDPQRR 184 + + + + QE E+ + + + L +++ + A + R+ Sbjct: 122 KLTPVQLTGVKMQEYFEMLLGQMEHSTVDSMVTTGLALHEMLALCARSILAQAEATSARQ 181 Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 I + TL + Q+ +AD+ A S+++ RLF RY G TP Y ++ R+ A L Sbjct: 182 VILQAAETLSKNYQKELYLADLLAEAHMSKSYFLRLFRRYMGTTPYNYLVNFRITQAKEL 241 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHP 290 L +SV E+A + F D+ +FS F G +P K + Sbjct: 242 LVLTDHSVSEIAQEVGFGDASNFSTRFAKATGQSPLQYRKRALKPQ 287 >UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 Tax=Lactobacillus RepID=A8YXG2_LACH4 Length = 274 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 108/272 (39%), Gaps = 15/272 (5%) Query: 25 NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84 N+ + I L++ H + + + ++V Y + G G + L Sbjct: 7 NLSNPHIESYILFYGQQKCHPNEYFESN----NLQKNYVLYYILSGEGTFSSNGHHTVNL 62 Query: 85 HGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT------SMMDIPVGQQSVIYNGEIYN 137 + + + + WE W+ + ++P + Sbjct: 63 SQGDLFLIPRNTTCFFKADKDNPWEYLWLGLAGSDTKKIIEASNLPNKNFLRQIKRTEFY 122 Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG---KKDPQRRQIEKLIATLH 194 L E+ E++ +++ NL +A LT + ++ + + +K P+ Q + I L Sbjct: 123 SILLELYEMLNKRKSLLTNLKIASLTSQFFYYLVKEFPNHPPVRKTPKNDQYQIAINYLQ 182 Query: 195 ASLQQR-WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253 + ++ ++ + S ++L LF T +P++Y + R++ A L+ +++ Sbjct: 183 KNYTDPNCNIVELCNRLGVSRSFLYSLFRENTNISPQKYLMQLRMEAAKKELQNTTSNLK 242 Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 E+A + + D F FSKAFK G +P+ +N Sbjct: 243 EIAHKVGYGDEFTFSKAFKRYSGVSPNVFRRN 274 >UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=Leuconostoc mesenteroides RepID=Q03WL4_LEUMM Length = 309 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 98/256 (38%), Gaps = 15/256 (5%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-G 104 + PL + ++ + ++G G N + TL ++P + Y + Sbjct: 26 SKTFSGHASGPLKRSHYLLHFVLEGQGTYFTMNHK-YTLKAGDFFLIRPDETIFYQADLN 84 Query: 105 LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN-----QELTEVAELIT------SPEAI 153 W W+ T + + + ++ L + E +T E Sbjct: 85 NPWHYAWISIGGTETAQLIENFSPFRNHHDTFSCATVENYLKLIVESLTLTSHRPQTELR 144 Query: 154 KNNLAVAFLTKIIYQ--WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211 N +A L ++ + W + + + P + +A ++ + S+ D+A I Sbjct: 145 LNQIASEILLLLMKENTWNVVEHQNATIRPMSEYTKLSLAYINNNFTYDTSITDIADAIK 204 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 + ++L RLF R G +PK++ L R++ A LL+ S+ ++++ + F + F +F Sbjct: 205 INRSYLSRLFRRDVGISPKKFLLRLRINEACQLLQTTQLSINQISEKVGFSNPSVFGHSF 264 Query: 272 KHKFGYAPSAVLKNTD 287 PSA K Sbjct: 265 TELIHETPSAYRKRRS 280 >UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8J8_PAESJ Length = 294 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 92/256 (35%), Gaps = 18/256 (7%) Query: 49 WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVW 107 P K P + N + G G + ++ L I + P + +Y + W Sbjct: 34 RPLHKVGPAVYNYTLIHSIDHGFGTFEWQR-KKYHLGKGDIFVIFPGVLFNYEADKAEPW 92 Query: 108 EQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167 W+ ++ ++ I N + + +A + + E + +T + Sbjct: 93 SYRWVALQGRNVTEMLENVGVTITNPIVRGADSANLASIFETIEQELELKSGETITSLAT 152 Query: 168 Q-WICLMYADGKK--------------DPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 W L+ A+ + R +E+ I S+ +A ++ Sbjct: 153 DGWFRLLLAEFARLNTNKLHYSSTKVLTDSERLVEQAIRWFQTQYMLPISIEKLATSLGY 212 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 ++F + T +PK+Y R++ A LL S+ +V ++ F D +FSK FK Sbjct: 213 HRTHFTKVFKQLTSLSPKQYINQVRMERARELL-NTNISIEQVGNSCGFTDPLYFSKQFK 271 Query: 273 HKFGYAPSAVLKNTDQ 288 G +P+ + + Sbjct: 272 KWTGTSPTQYREELKR 287 >UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG90_9FIRM Length = 298 Score = 177 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 11/253 (4%) Query: 43 EHYRVI-WPR-DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP-MDIHS 99 HY+++ +PR + +P + +Y G K + L + P Sbjct: 28 GHYKLVHFPRFETTRPTGRPDYQLLYIASGIAHFQ-KGETYVPLPAGSAVLYHPNHTQFY 86 Query: 100 YHCEGLVWEQYWMEFTPTSMMDIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNN 156 Y+ E YW+ FT + + YN I ++ ++ +I + K N Sbjct: 87 YYSAEDSSEVYWIHFTGNRVSQYLSDWGVPDNDFYNVGINSRYISFFNHIIHEQQLKKEN 146 Query: 157 ---LAVAFLTKIIYQWICLMY-ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 L +L +I+ M A + I K + LH + S+ D+A Sbjct: 147 YMELCKYYLIQILILMNRGMKEASAPYNNHVSIINKTVTYLHEHYNEPISIIDLAKENHL 206 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 + W F Y G +P+ Y L+ R+D A L S+ +VA + D+F+FS+ FK Sbjct: 207 TPNWFNHCFQEYYGMSPQAYLLNIRIDKAKEFLTNYMLSISDVALLTGYSDAFYFSRIFK 266 Query: 273 HKFGYAPSAVLKN 285 K G +P KN Sbjct: 267 RKTGLSPQQYRKN 279 >UniRef50_UPI000196AF05 hypothetical protein CATMIT_01210 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AF05 Length = 288 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 104/250 (41%), Gaps = 15/250 (6%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYW 111 P++ + +V + G G++ + N + I + + +Y + W+ W Sbjct: 43 TYGPIVRSYYVMHFVFSGKGQLTI-NEHSFDVKAGDIFLIPANKVATYQADKNHPWKYGW 101 Query: 112 MEFTPTSMMDIPVG------QQSVIYNGEI--YNQELTEVAEL--ITSPEAIKNNLAVAF 161 + F + Q +I+N ++ Y +++ + +L T E ++N + Sbjct: 102 VNFLGINAEQYFYSLTKDTHDQYIIHNVDVNKYYKQIERLLDLSFNTDAEYFESNSILLH 161 Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 + ++Y+ + + + + K +I L + Q ++++A ++ RLF Sbjct: 162 IFAMLYEELNIHFNNNVKYSLAEEIR---LYLDLNYQYNLKMSEIADKFGIHANYMTRLF 218 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 + +PK+Y L +L A LL+ V +A ++ F D+ FSK F + +P+ Sbjct: 219 HQKFDISPKQYLLSIKLKKAAGLLQSTNLPVSTIAASVGFIDALAFSKKFSKTYHCSPTQ 278 Query: 282 VLKNTDQHPT 291 K TD+ Sbjct: 279 YRKQTDEKKN 288 >UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNA5_9CLOT Length = 282 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 94/256 (36%), Gaps = 12/256 (4%) Query: 43 EHYRVIW--PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100 HYR++ + W +Y +G G E+ + ++ P + Y Sbjct: 29 GHYRLLRLEKLHTVRIQGRRDWQLLYVAKGAGHFFRPREER--VKQGSVVVYPPGEPQDY 86 Query: 101 -HCEGLVWEQYWMEFTPTSMMDIP------VGQQSVIYNGEIYNQELTEVAELITSPEAI 153 + E YW+ FT + G + + Y + E+ + + Sbjct: 87 FYLLKEAPEIYWIHFTGERAEGLLEEWGLFHGHSCFVGEQDRYLRCFEEIIQELQLQPPG 146 Query: 154 KNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 L +++ + + +++ ++ + + +++ D A Sbjct: 147 FQRLCALRFEELLLSMGRQRLRLKNPQLAGDSLVTQVLNDMYKTYYRNYTIEDYAKRHNV 206 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 S WL R F + TG++P +Y + R+ A LL+ ++GE+A L + +FS+ FK Sbjct: 207 SVCWLIRRFKQVTGESPNQYLIQIRIRRARELLESSRLNMGEIASVLGYESPLYFSRQFK 266 Query: 273 HKFGYAPSAVLKNTDQ 288 G +P + + Sbjct: 267 QLQGVSPKRYREQRQK 282 >UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CL13_STRSV Length = 282 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 95/259 (36%), Gaps = 11/259 (4%) Query: 39 TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98 +A Y P + + +V ++G G + N L + P Sbjct: 19 FFAFCGYSKTEAHHSFGPAVRDVYVIHIVLEGRGTYSVGNQR-YDLQEGQGFVVPPGQSV 77 Query: 99 SYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN- 156 Y + W WM + L E L+ A + + Sbjct: 78 FYQADREEPWSYVWMGLGGRLLPRYLQDLGLQSGQWSFELTSLQEFKALVFESLAYEGSG 137 Query: 157 -LAVAFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIATLHASLQQRWSVADMAA 208 A L + +Y+++ L+ K+ +++++ L + L + SV ++A Sbjct: 138 ITAELALQRQVYRFLELLSQRLKQTSLITESRRVNPYVQQVLELLSSHLPESLSVQELAQ 197 Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268 + ++L RLF GK KEY D RL++A LL SV E+A+ F + FS Sbjct: 198 KLALHPSYLSRLFKDEVGKGIKEYSNDLRLNMAADLLTGSQLSVEEIANKTGFAGTQSFS 257 Query: 269 KAFKHKFGYAPSAVLKNTD 287 KAFK G +P K + Sbjct: 258 KAFKKARGQSPLNFRKASS 276 >UniRef50_C7G8V7 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8V7_9FIRM Length = 289 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 11/240 (4%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQY 110 P I + ++ Y ++G G L+ N + + +P + Y+ E WE Sbjct: 49 HAWGPGIRSCFIIHYVMKGAG-YLIVNHRKYHVKAGESFLTRPYTLIEYYPEEENPWEYM 107 Query: 111 WMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI-----KNNLAVAFLTKI 165 W++F + + Q N ++ ++ L + + N A L I Sbjct: 108 WVDFLGNQVENWVEHTQFEEKNPVCSLKQEEKILPLFLKLLEMDIYHQQRNEACGVLLSI 167 Query: 166 IYQWICLMYAD--GKKDPQRRQIEKLIATLHASLQQ-RWSVADMAATIPCSEAWLRRLFL 222 + ++ + + G+ D +++E + + + + + + + S L RLF Sbjct: 168 LGVYLDIFPVECVGRSDEDEKRMEMAVLLIKNHYHKSEFHIQRLCEMLNISRVTLYRLFK 227 Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282 TG +PK+Y L+ R++ A LL+ G SV A + F DSF+FS+ FK G +PS Sbjct: 228 SKTGISPKQYLLNYRIEQAKLLLRM-GTSVKNTAASCGFNDSFYFSRVFKEYTGSSPSRY 286 >UniRef50_B0MNH5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNH5_9FIRM Length = 295 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 88/246 (35%), Gaps = 7/246 (2%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105 R K+ S +YT +GCG + + N + L N ++L P H Y+ E Sbjct: 46 RTSPEFHVKRDKGLTSHQFLYTAKGCGVLEVGN-RKYKLEKNSFMYLPPELPHEYYPEND 104 Query: 106 VWEQYWMEFTPTSMMDI----PVGQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAV 159 W WM F + I + V N ++ + + + L ++ Sbjct: 105 EWNTCWMVFRGDFLKGIMNTMGFSGEMVATNADLNAFKKIFGRIYSLAADNLHNGEKCSL 164 Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 ++ + + + + ++ +++++A S + R Sbjct: 165 LIYNAVLAAKEIFGGKQEENNTGNLIADNAVRYINEHYSDDITLSELACLSGVSPQYFDR 224 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 +F P EY ++ A S+L SV +++ +L + +F FK G +P Sbjct: 225 IFRERLNMRPMEYIARVKISKAKSMLLDSDISVTQLSKSLGYTGPTYFGIVFKKYEGISP 284 Query: 280 SAVLKN 285 S KN Sbjct: 285 SEFRKN 290 >UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG84_SANKS Length = 297 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 96/276 (34%), Gaps = 20/276 (7%) Query: 18 IPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLK 77 +P+ V +G+ +A H + + A V + G G Sbjct: 36 LPVTSRLLVTDAGVF------PHAARH-------GRSRVSGAEQHVVLVCTDGAGWCRTP 82 Query: 78 NGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGEIY 136 G ++ + + L + H Y + W +W ++ + Sbjct: 83 AGTEV-VGRGDAVLLLAGEAHEYGADAEDPWTLWWFHVLGGDAAELVSAGHQASGGPVAH 141 Query: 137 NQELTEVAELIT---SPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKLIA 191 ++ VA L++ T + + + A G++ P +E+ + Sbjct: 142 LRDAAPVASLVSQVIDGLDAGTRAGTLQATGAAFHALTQVVATGRRSPGPSLSPVERALE 201 Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251 L A+ +R VA +AA + S + L LF + G +P Y R+ A LL + Sbjct: 202 HLRATSPRRTPVASLAAMVGLSTSRLGALFREHVGVSPNAYQSQLRMARARELLDSTDLA 261 Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 V VA F D +FS+ F G APSA T Sbjct: 262 VAAVASACGFDDPLYFSRQFARVHGVAPSAYRGRTR 297 >UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN80_9FIRM Length = 285 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 105/258 (40%), Gaps = 14/258 (5%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWE 108 P P + + + Y +G K + NG L F+ P Y +G W Sbjct: 29 PGQVCGPRVRSYCLLHYITKGKCKFQV-NGMTYHLQAGQGFFIAPDFETRYETDGDEPWN 87 Query: 109 QYWMEFTPTSMMDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164 W+ M + + Q + I++ ++ + V +++ + + F Sbjct: 88 YIWVGAAGEEMKHLMHVLGLSQANPIFSCHQGDRLVHCVRDMLQHRQMTMTDHY--FRMS 145 Query: 165 IIYQWICLMYADGKKDPQ----RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 +Y++I ++ + + + I ++ + L + S A++AAT+ + ++L L Sbjct: 146 TLYRFIAILSEERQVNQPLASVNSYIANVMTYVRHHLHEHMSTAEIAATMNLNRSYLSSL 205 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 F TG T + Y R+ A LL+ S+ +A++ + S ++ F+ +G +P+ Sbjct: 206 FRSQTGMTLRSYIQLCRMTRAKYLLESTHLSIASIAESCGYEKSDSLNRTFRKTYGISPA 265 Query: 281 AVLKN--TDQHPTDASPH 296 K+ DQ + PH Sbjct: 266 DYRKSFLADQTQSSRKPH 283 >UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax=Clostridium perfringens RepID=Q0SUX5_CLOPS Length = 279 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 25/273 (9%) Query: 36 LWHTYADEHYRV---------IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86 LW Y E++ + P + + V Y +G G NG+ TL Sbjct: 4 LWKKYVKENFEMNVDECGIEQGIPGLGYNYEVLKNAVIHYVTKGYGTFKF-NGKVYTLKQ 62 Query: 87 NCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN-QELTEVA 144 I L Y WE YW+ F+ ++ + ++ I N + N +E +++ Sbjct: 63 GDIFILLKGMQVEYVASIDDPWEYYWIGFSGSNANEYL--NRTSITNSCVANCKENSKIP 120 Query: 145 ELI---------TSPEAIKNNLAVAFLTKIIYQWICLMYA--DGKKDPQRRQIEKLIATL 193 ++I +P + L + L ++Y I + K I+ + + Sbjct: 121 QIILNMCEISKTYNPSKSDDILLLKELYSLLYTLIEEFPKPFEYKDKELHTYIQDALNFI 180 Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253 +++ +V ++A + S ++L ++F++ G +P+ Y ++ R+ A LLK +G Sbjct: 181 NSNYMHSITVQEIADYVNLSRSYLYKMFIKNLGISPQRYLINLRMYKATLLLKGTKLPIG 240 Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 EVA ++ + DS FSK F F +P N Sbjct: 241 EVASSVGYSDSLLFSKTFSKHFSMSPLNYRNNQ 273 >UniRef50_P28809 MmsAB operon regulatory protein n=6 Tax=Pseudomonas aeruginosa RepID=MMSR_PSEAE Length = 307 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 98/263 (37%), Gaps = 8/263 (3%) Query: 38 HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE---QITLHGNCIIFLKP 94 + + HYR + + + +Y +G G + ++ GE + + +++L P Sbjct: 46 YPTSLGHYRRARD-HRMSRERHDEHLLIYCSEGQGLLRVREGEAWREYRVGSGDLLWLPP 104 Query: 95 MDIHSYHCEG-LVWEQYWMEFTPTS---MMDIPVGQQSVIYNGEIYNQELTEVAELITSP 150 H Y + W +W S + + + + + + + L +L+ Sbjct: 105 GMAHDYAADDRQPWTIFWTHLRGDSATWLQHSAGYRDTPLRHWGLQHALLGGFEQLLEVR 164 Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210 + + +C + ++ L A + L R + +AA Sbjct: 165 HSGYRFQHFLLAASRLRSLLCQLPLLRPLREGSLDLDGLHAYMREHLHARLELERLAAFC 224 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 S+ + TG+TP +++L +++ A LL SV V + + DS++FS+ Sbjct: 225 NLSKFHFVSRYKAITGRTPIQHFLHLKIEYACQLLDSSDQSVARVGQAVGYDDSYYFSRL 284 Query: 271 FKHKFGYAPSAVLKNTDQHPTDA 293 F G +PSA + Q A Sbjct: 285 FSKVMGLSPSAYRQRVRQGEGGA 307 >UniRef50_Q5WK33 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK33_BACSK Length = 294 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 108/265 (40%), Gaps = 15/265 (5%) Query: 37 WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLK-PM 95 W T D+ YR + ++ I V YT+ G G++ + G + F+ P Sbjct: 30 WETQTDQAYRWDGTKRMEREKI----VFQYTLSGYGEL-VHEGTLYKVEAGQAFFVSLPS 84 Query: 96 DIHSYHCEGL--VWEQYWMEFTPTSMMDIPVGQQS---VIYNGEIYNQELTEVAELITSP 150 Y+ E WE ++ + + ++ +++ + ++ + + +L Sbjct: 85 AHCYYYPEEETEPWEFLYVTIEGKEALRLQKHMENKYGPVFSLQKDSEPIRRLFKLYAET 144 Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR---RQIEKLIATLHASLQQRWSVADMA 207 A + + ++ Y++I + + P++ + + I + A+ + ++ ++A Sbjct: 145 AAGEIQDSYTG-SQKAYEFILSCFRFLEVPPKQVVKEPLARAIRYIEANYARPLTLEEIA 203 Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267 S+ + + F TP Y R+ A SLL Q +++ EVA + D +F Sbjct: 204 QEAGWSKYYFIKQFKTELNITPMNYVTIIRIKKAASLLAQTDDTIAEVAYQVGMDDPNYF 263 Query: 268 SKAFKHKFGYAPSAVLKNTDQHPTD 292 +K FK G + S KN D H D Sbjct: 264 TKVFKKTVGVSASKFRKNEDNHLID 288 >UniRef50_B8KL56 AraC protein, arabinose-binding/dimerisation n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KL56_9GAMM Length = 299 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 111/284 (39%), Gaps = 20/284 (7%) Query: 14 TPYNIPLLINENVISSGI-SLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72 TP + ++++ +++G ++ AD H+ +++ + + ++ QGCG Sbjct: 25 TPGFLLDALDKHPLTAGCYPAAMGYYPNADGHF-----MHRER---HDDNLLMFCTQGCG 76 Query: 73 KILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMD----IPVGQQ 127 + G +++ + L HSY + W YW+ F D + + Sbjct: 77 WVQTPAGR-VSVDAGDTVVLPQGLTHSYAADERTPWTLYWVHFQGRDAQDFVEHLLIEDG 135 Query: 128 SVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR--- 184 I++G + LT +++T A + + + + Sbjct: 136 YRIHSG-VEPSLLTGFEQMLTVGSTGYRLDAFIGAANRLRHLLAEFALCRDRQRGQNMGA 194 Query: 185 -QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 ++ +L + + + S+ ++AA + + TG +P ++L +++ A Sbjct: 195 MRLLELQSFMRERVSSSLSLQELAAFTGLTPQHFATRYKAETGYSPMRHFLHMKMEAACR 254 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 LL +SV +A L + D +FS+ F+ G +PS ++ Sbjct: 255 LLDSTQHSVKFIAANLGYVDPLYFSRMFRQTVGLSPSQYRESQR 298 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 103/248 (41%), Gaps = 13/248 (5%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLV 106 WP K+ + + + G G + + + E + ++ + SY G Sbjct: 30 CWPEWKEFDYTVSYNKLYFILDGEGWVKIGDEELYPV-PGQLVLMPARTRQSYSVISGRP 88 Query: 107 WEQYWMEFTPT-------SMMDIPV--GQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 + +YW F+ T S +++P ++ Q + + + ++ Sbjct: 89 YLKYWSHFSATVGDSDVFSWLNVPHCYDLSGNAEMPALFQQLVDAHRSDTLAARLREKSV 148 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 + L+++ ++AD +D ++ K+ + L + ++ MA T+ + Sbjct: 149 MLDILSRVFEHQQPQIHADKMED--MGRLHKVQQYIKNHLHEEITLEQMAGTLHLHPNYF 206 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 + F R+ G TP++Y R++ A +L+ S+ E+AD F + +FSK F+ + GY Sbjct: 207 IKYFKRHFGITPQKYLSLKRMEQAKLMLRTTSLSIKEIADATGFESANYFSKTFRKEVGY 266 Query: 278 APSAVLKN 285 +PS N Sbjct: 267 SPSEYRNN 274 >UniRef50_Q5WK82 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK82_BACSK Length = 297 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 110/290 (37%), Gaps = 18/290 (6%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 + + T + P N+ + G W D Y W +K+ +S + Sbjct: 7 FTRGSHSFTFHLFPETGLLNLWNVG------WEVQTDTSY--YWDGNKRA-KDNDSIIFQ 57 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLK-PMDIHSYHCEG--LVWEQYWMEFTPTSMMDI 122 YT+ G G + + E+ T+ + + P D Y+ E WE ++ S+ DI Sbjct: 58 YTIAGSGVLEI-GKERYTVGQHQAFIVSVPSDHRYYYPENAKEPWEFIYISLQGASVQDI 116 Query: 123 ---PVGQQSVIYNGEIYNQELTEVAELITS--PEAIKNNLAVAFLTKIIYQWICLMYADG 177 + + I + + + + + + +++ A A+ Sbjct: 117 WQRLIQKSGPIVSLPPNSPLIRSLYSIYADTKADGLRDPYLAATQGYQFLIECFRAMAEE 176 Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 + + ++ +A + A ++ + ++A + S L RLF + TP Y D R Sbjct: 177 RPQNEPYHYQRALAYIEAHYHEQICLDNIAEEVGVSRYTLTRLFKKQLHTTPISYVTDLR 236 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 + A SLL ++ ++A + + D +F K F+ G + + +N D Sbjct: 237 MRKACSLLLHTNRTIKQIAADVGYPDDNYFHKVFRRYTGSSATQFRRNGD 286 >UniRef50_A8YTU0 Msm operon regulatory protein n=3 Tax=Lactobacillales RepID=A8YTU0_LACH4 Length = 283 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 87/249 (34%), Gaps = 9/249 (3%) Query: 47 VIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-L 105 P P + +G G + ++ G +H N + ++ Y + Sbjct: 32 YCNPGWSYGPKRREYHFIHFVKEGKGTLTIE-GHTFHIHKNQCFIVPAGEVSLYAADKKD 90 Query: 106 VWEQYWMEFTP---TSMMDIPVGQQSV---IYNGEIYNQELTEVAELITSPEAIKNNLAV 159 W+ W+ F + + + + I + +Y Q++ ++ L + Sbjct: 91 PWKYSWIGFLGIESSRYVQQLISNNNFVIDIKDAVLYEQQIRKIISLKHDSLS-SALKMT 149 Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 +I I + + + + + + D+A + + L Sbjct: 150 GITYEIFGSLIDEVNDTEEVKTTNSLATRAKHYMDLNYYDAIKIKDIANFLNVNVNCLSS 209 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 F +PK+Y + ++ A LL N++ VA+++ F DS FSK FK +P Sbjct: 210 AFKEEFNLSPKQYLMKLKIRKAKKLLSTTNNTITVVANSVGFNDSLAFSKVFKQYTQSSP 269 Query: 280 SAVLKNTDQ 288 S+ K + Sbjct: 270 SSYRKQATE 278 >UniRef50_UPI00017450D3 transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017450D3 Length = 285 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 88/266 (33%), Gaps = 10/266 (3%) Query: 38 HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97 +T + + VY ++G G + + G + + ++ Sbjct: 21 YTTVRAGHLTADKTHHIERETLAGHELVYCLRGSGTVRVA-GRVHRVKARGLYWVSCWHP 79 Query: 98 HSYHCEG-LVWEQYWMEFTP------TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSP 150 H Y + WE YW+ S++ I + + + ++ SP Sbjct: 80 HQYQADPIQPWELYWVRIEGPGLDALASLLRIRETPVFPLLDDAATKACFMDAFNILESP 139 Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGKKD--PQRRQIEKLIATLHASLQQRWSVADMAA 208 + +++ + DG +D P +E+ + + ++D+A Sbjct: 140 SPNAPASMHVAVARLLSLLYENRFKDGGQDTEPVPSTLERPLIRMRQHYADALRLSDLAH 199 Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268 S + R F R G +P ++ R++ A L + E+A + D + FS Sbjct: 200 LAGMSVSHFIRTFKRTMGTSPIDWLRRERMNQAKHRLIDTDEPIKEIARQCGYRDPYFFS 259 Query: 269 KAFKHKFGYAPSAVLKNTDQHPTDAS 294 K FK G P+ + S Sbjct: 260 KDFKKLTGLPPTDYRVQERGRAHETS 285 >UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=Lactobacillus salivarius RepID=Q1WTL6_LACS1 Length = 278 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 95/259 (36%), Gaps = 11/259 (4%) Query: 39 TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98 A+ K P + ++ Y + G G LH ++P Sbjct: 18 QLANVGRSDTLSGHKYGPAVRPYYLIHYILAGSGTFKTDQS-IYKLHAGQGFLIEPGQET 76 Query: 99 SYHCE-GLVWEQYWMEFTP----TSMMDIPVGQQSVIY--NGEIYNQELTEVAELITSPE 151 +Y + W W+ F+ M IP+ Q+ I+ N EL + L + Sbjct: 77 TYIADKNTPWSYVWIGFSGNFADQLMQQIPLNQREPIFSLNDPKRLIELVNLLLLKSVNS 136 Query: 152 AIKNNLAVAFLTKIIYQW--ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209 K L +++L + + ++ + +EK I+ ++ + S A +A Sbjct: 137 TTKKLLNLSYLLEFLSIISNATIISRESTTSISDIYVEKAISLINKNFP-NISAASLAQM 195 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 I ++L + F + TG T + Y + ++ A L++ S+ E++ + ++ Sbjct: 196 IGLDRSYLGKRFKKVTGMTLQTYLKNYKITQARHLIESTNLSLLEISQRCGYQRVDSLAR 255 Query: 270 AFKHKFGYAPSAVLKNTDQ 288 FK +G PS + Sbjct: 256 TFKATYGLTPSDFRLQQKE 274 >UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN84_9FIRM Length = 297 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 89/256 (34%), Gaps = 11/256 (4%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 Y P P+ + + + G G + + +G L + I Y + Sbjct: 44 GYEACAPGHHYGPIYRAYQLIHFILSGKGVLEI-DGHTFQLGAGDAFLIPSGKIAYYAAD 102 Query: 104 GL-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158 W W+ F + + + Q+ + E I S E Sbjct: 103 AADPWCYTWINFLGINSQMYTYQLIASSPEPYILRGLDTQKYHALIEQILSLEGTATARY 162 Query: 159 VAFLTKIIYQWICLMYADGKKDP----QRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 ++ Q + ++ D D + ++ L + ++ + ++A + Sbjct: 163 FKG-NGLLLQVLGELFQDAGFDERYWGKNSVADETKFYLDVNYSEKLKLKEVAHNLGVHP 221 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 +L R+F G TPK+Y L+ +L A LL+ V +A ++ F D FSK FK Sbjct: 222 NYLTRVFHEKYGVTPKQYLLNLKLQKACQLLRTTDLPVAVIAGSMGFDDGMAFSKLFKKT 281 Query: 275 FGYAPSAVLKNTDQHP 290 + APS + P Sbjct: 282 YSCAPSDYRRKEKAAP 297 >UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C7G788_9FIRM Length = 292 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 97/274 (35%), Gaps = 12/274 (4%) Query: 24 ENVISSGISLISLWHTYADE-HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL------ 76 +VI++ + + E Y + NS++ + G G++ Sbjct: 18 RSVINTPSAFTRKNFFHIQEAGYLKSLKSHLSRRSELNSYLFFVVLSGSGEVTYREPLSE 77 Query: 77 KNGEQITLHGNCIIFLKP-MDIHSYHCEGLVWEQYWMEFTPTSMMDI---PVGQQSVIYN 132 T H FL + + WE W+ F + + Sbjct: 78 GGMISSTAHAGDCFFLDCSGEYTHISTDEDPWELLWIHFNGPEARAYYTYFRDHHNWHFR 137 Query: 133 GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR-QIEKLIA 191 + + + + +I E ++ + +II+ + +K+ +++ ++ Sbjct: 138 SAHFTELINAIESIIRYNEEPTDDTDLLTAQQIIHILTLICTESNEKNELLSDKLKTILH 197 Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251 L + S+ +A S+ +L R F + G T +Y L R++ A LL+ +S Sbjct: 198 YLDEHYTENISLDQLAEQFFISKYYLSREFKKEFGTTVIQYVLAKRINNAKELLRYSNSS 257 Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + E+A D+ +F+K F+ G S K Sbjct: 258 IEEIAHLCGIDDASYFNKVFRKMEGCTASEYRKR 291 >UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVZ4_PAESJ Length = 288 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 106/262 (40%), Gaps = 16/262 (6%) Query: 30 GISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCI 89 G+ + A +Y V P + + + + G + GE + L + Sbjct: 24 GLWPLRTGRNIAKANYSV-------GPRVIECFSFHFVLNGSVTLSSM-GETVILPKGSM 75 Query: 90 IFLKPMDIHSY----HCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVA- 144 L P HSY + + +W+ FT + + + + ++ TE+A Sbjct: 76 FCLFPDVKHSYWITQYDSASPLKMHWLAFTGSQAEMLVRRIGLTEHKPYLRSRLTTELAN 135 Query: 145 ELITSPEAIKN--NLAVAFLTKIIYQWICLMYAD-GKKDPQRRQIEKLIATLHASLQQRW 201 +L E +KN L ++YQ ++ + ++ ++ + + + Sbjct: 136 QLQACMERMKNWQKDGDLQLQMMLYQLFEMLSRPLPEASEEKDWLKACLQYMQTHYAEGI 195 Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261 SV D+A + L F + G +P+EY + R++ A+ +L+ + S+ +++ +L + Sbjct: 196 SVTDLAEWSGMHRSHLSSRFKQSFGISPREYLIMLRMERAVEMLQSRTLSITDISLSLGY 255 Query: 262 FDSFHFSKAFKHKFGYAPSAVL 283 D + FS+AF G +PS Sbjct: 256 TDLYTFSRAFSTYTGMSPSNYR 277 >UniRef50_O33813 Lactose operon transcription activator n=4 Tax=Staphylococcus RepID=LACR_STAXY Length = 279 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 92/237 (38%), Gaps = 14/237 (5%) Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121 V QG G GE L I L+ Y W YW+ +++ Sbjct: 40 VLHIVTQGEGTFSYA-GETYHLTAGDIFLLERGMEVEYKPSFSNPWTYYWVGMNGKQILN 98 Query: 122 IPVGQQSVIYNGEIYNQELTEVAELIT-----SPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + + S++ + I Q+ T++ +I S NN + + +YQ + + Sbjct: 99 Y-LSRCSIVDSHVILGQDTTDIKNIIQLICKLSQSIESNNSNDILIMQYLYQLVYTLQEK 157 Query: 177 GKK------DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 K D I+ + ++ + Q+ +V D+A ++ + + L +LF + G +PK Sbjct: 158 FPKIFSVQVDIVNEDIQHAVDFINTNYQKHITVEDVAKSVNITRSHLYKLFKKNLGCSPK 217 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 EY R+ A LL + +++ + + D FSK F F + S + Sbjct: 218 EYLTYIRMYHASQLLIHTSTLISDISRQVGYKDPLLFSKNFTKHFEISASEYRHHFS 274 >UniRef50_Q47XU2 Transcriptional regulator, AraC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47XU2_COLP3 Length = 305 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 4/228 (1%) Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMD 121 + T G GKI L N E + I+ L Y G WE W+ S Sbjct: 64 HYLISTHAGEGKIKLGNNE-YLVKPGSIVLLPAGTPFLYELSGEYWEMCWLLLHDCSEYK 122 Query: 122 IPVGQQSVIY---NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178 +Y N E Q ++ + E ++++ + + ++YQ + + Sbjct: 123 FVHQLHPSVYSSINAERLYQTMSLIREFQHGESIYQSDIILRLVEVLVYQIAQTLNMGQQ 182 Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 Q+++ LI ++ LQ W+V +AA + SE RL + G TP + RL Sbjct: 183 LTKQQQKFHSLIRRVNKQLQLSWTVKQLAAEMHMSEPHFFRLCKKEMGMTPIKLLTHTRL 242 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 + A LL+ ++ ++ADT+ + DS F+ FK +G +P K Sbjct: 243 EYACYLLRYTQYNLDQIADTVGYGDSASFAHRFKKDYGLSPGRWRKEQ 290 >UniRef50_A4AC34 Transcriptional regulator, AraC family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4AC34_9GAMM Length = 292 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 102/282 (36%), Gaps = 16/282 (5%) Query: 14 TPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGK 73 TP + + ++ ++ G ++ + + + + + +G G Sbjct: 18 TPGFLLEALEKHPLTCGCYPTAMGFYPKACGHFMRREQH-------DDNLLFLCTEGRGF 70 Query: 74 ILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDI---PVGQQSV 129 + + G + ++ L HSY E W YW+ F + D + Sbjct: 71 VQTQRG-GFAVATGDMVLLPRDQEHSYAANEQDPWTLYWVHFKGSKAGDFIDHLLPDDDF 129 Query: 130 IYNGEIYNQELTEVAELIT----SPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ 185 + + LT +++T A L ++ ++ ++ R Sbjct: 130 RVHSGVEPSLLTGFEQMLTVGSTGYSLDAYIGAANRLRHLLAEFALCRDRQRSQNMGRLH 189 Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + +L + + + S+ ++AA + + TG +P ++L +++ A LL Sbjct: 190 LRELQSYMREHVSSSLSLGELAAFTGLTPQHFASRYKAETGYSPMRHFLHMKMEAACRLL 249 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +SV +A L + D +FS+ F+ G +PS ++ Sbjct: 250 DSTQHSVKTIAVMLGYVDPLYFSRMFRQTVGLSPSQYRESQR 291 >UniRef50_C6D787 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D787_PAESJ Length = 267 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 87/237 (36%), Gaps = 6/237 (2%) Query: 51 RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQ 109 R K P + + + + + G G + N +Q L + P Y+ + WE Sbjct: 24 RHKWGPGVRDIYALHFIISGKGTLETNN-QQYPLSTGDSFMIFPKTEIYYYPDPEDPWEY 82 Query: 110 YWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169 W+EF + + + + + ++ T+ + Sbjct: 83 VWIEFKGDEAKRL-IAMTGLESDKPVVAACPADLKPYFPQVVGADTRHFEKMRTEAQLRL 141 Query: 170 ICLMYAD--GKKDPQRRQIEKLIATLHASLQQR-WSVADMAATIPCSEAWLRRLFLRYTG 226 + Y + ++ ++ + + + +V+D+ + ++L RLF +G Sbjct: 142 LLSYYVEFYPREAQPIDYVQLAKEYIMINYWRTTLTVSDIVNAVSLERSYLFRLFKEASG 201 Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 + Y R++ A LL G S+ VA ++ + D +FSK FK Y PS + Sbjct: 202 MSVSGYMTAYRMERARELLMSSGLSIKSVACSVGYKDQLYFSKVFKKATSYTPSEYM 258 >UniRef50_A4XK77 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XK77_CALS8 Length = 273 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 101/245 (41%), Gaps = 10/245 (4%) Query: 49 WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWE 108 + + + ++T++G G L+ +G++ + N FL P H Y W Sbjct: 27 YQEHIIRKNGHPDYHYLHTLEGSG-YLIVDGQKYLVDENTAFFLYPGIAHEYFAATSKWS 85 Query: 109 QYWMEFTPTSMMDIP--VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166 W+ F + I +G + + L + E I++ ++ N + +++I Sbjct: 86 TIWLTFNGPASETILKTMGIRPFEIFKLTNKKYLEGMLEAISNKASVYNYIVSIECSQLI 145 Query: 167 YQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 Y +I M+ + + ++ ++ ++ + + ++ S+ ++++ + S L + Sbjct: 146 YSFILHMFLNLQNKIEKNFENNYLKLLPVLQYIEENYKKAISLDEISSIVNLSPQHLCTV 205 Query: 221 FLRYTGKTPKEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 F + TP EY + R+ A LL +Q + EV + F + +F FK G P Sbjct: 206 FKKTFQTTPYEYLIRVRIQKAKELLMRQSSIQIKEVCYEVGFKNPSYFCYMFKKLEGITP 265 Query: 280 SAVLK 284 + Sbjct: 266 LQFKR 270 >UniRef50_A0QZE6 MmsAB operon regulatory protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QZE6_MYCS2 Length = 295 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 94/256 (36%), Gaps = 14/256 (5%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 + + + A V + G G + G + + L H Y Sbjct: 44 GFFPRATRHGRSRSRGATEHVVMVCTAGAGWCRTEEG-AFDVGVGDAVLLPKGRAHMYGA 102 Query: 103 -EGLVWEQYWMEFTPTSMMDI-------PVGQQSVIYNGEIYNQELTEVAELITSPEAIK 154 E W +WM T + ++ PV + + +++V +++ Sbjct: 103 AESDPWTLWWMHVTGSDSAELIAAARVSPVSPVVHLVDPAPATSLISQVIDMLADASTTA 162 Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKLIATLHASLQQRWSVADMAATIPC 212 + A + + ++ A G++ + +++ + L ++ +R VA +AA + Sbjct: 163 GLIGAAGAA---WHALTVIAATGRQRSTGEADPVDRALEHLRSTSPRRTDVAALAAIVGL 219 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 S + L LF + TG P E+ R+ A LL ++ VA F D +FS+ F Sbjct: 220 STSHLNALFRQRTGIGPLEFQQQLRMSRARELLDTTTLTIAAVARAAGFNDPLYFSRQFA 279 Query: 273 HKFGYAPSAVLKNTDQ 288 G +PSA + Sbjct: 280 KVHGQSPSAYRQRHQN 295 >UniRef50_B8H8F4 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H8F4_ARTCA Length = 288 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 110/280 (39%), Gaps = 9/280 (3%) Query: 10 VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69 +N+ +P + + +S I+ + + + +P A + + V Sbjct: 7 FQNQRLVVVPRPLVRDALSRPITRHLV--VTDAGVFPAAADHGRHRPDGAAETIVILCVA 64 Query: 70 GCGKILLKNGEQITLHGNCIIFLKPM--DIHSYHC-EGLVWEQYWMEFTPTSMMDIPVG- 125 G G + G + + + L + H+Y EG W +W + D+ G Sbjct: 65 GAGWVET-GGMRTAVGAPAAVVLPGGTGEAHAYGAAEGDPWTIWWCHVRGADVPDLLEGA 123 Query: 126 --QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR 183 + + + ++ + E+IT+ E ++ + + ++ + + D + + Sbjct: 124 GVRGAQVIPLVAVDRLTAMLDEIITALEKDQSPARLMATAGMAWRLLTALAIDRRLPEKG 183 Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243 +++ + L + +AD+AA + S ++L +LF TG ++ ++ A Sbjct: 184 TPLQQAMNYLEERVDGSVRLADLAALVGVSSSYLSKLFREATGGGVLAHHTALKMARARL 243 Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 LL + EV + D F+FS+ F+ G +PSA Sbjct: 244 LLDTTDLPIAEVGREIGLQDQFYFSRQFRRLHGVSPSAYR 283 >UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDD0_BREBN Length = 298 Score = 170 bits (430), Expect = 8e-41, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 93/240 (38%), Gaps = 10/240 (4%) Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWMEFTPTS 118 ++V YT+ G G++ + + L ++ H Y+ E WE ++ + Sbjct: 54 TYVFQYTISGSGRLDIGE-KSYPLRAGKTFLVEVPSCHRYYFSGESDHWEFVYITLVGSQ 112 Query: 119 MMDI------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL 172 + G I Q L ++ + + + A + + + Sbjct: 113 ATECWEYIQANGGPVLSIPPEAKLVQLLLKIYQEVCEKRVTDLYCSSAKAYEFVMECYRF 172 Query: 173 MYA-DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 M D +I + + + A ++ S+ D+A S +L LF Y TP + Sbjct: 173 MKNIDNPSKQVPDRISEAVCFIQAHYKETISLGDIANAAGLSRYYLINLFREYLNTTPLQ 232 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPT 291 Y R++ A+ LL Q SV ++A + + ++ +F+K FK G +P + + PT Sbjct: 233 YITKLRIEKAMDLLTQTNLSVNDIALAIGYANANYFNKVFKKLIGTSPGQFRECKNSLPT 292 >UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10 Tax=Rhizobium/Agrobacterium group RepID=B5ZUS0_RHILW Length = 274 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 7/245 (2%) Query: 51 RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY 110 R S+ V +G G + +++L G + +L P HSY + W++ Sbjct: 29 RHAVTDRKLPSFAVVLVERGQGWLETAASGRLSLTGPALFWLFPNRAHSYSPDEDGWDER 88 Query: 111 WMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAEL-------ITSPEAIKNNLAVAFLT 163 W F + D + + + L +VA L + + A L Sbjct: 89 WALFEGSFTRDFVRLRIIAERHPVVALHRLDDVARLFGTLHADLLDDTHLGQASAALMLH 148 Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 +I+ ++ +R + ++ TL Q +A AA S A LRR F Sbjct: 149 RIVISAARQAIGAAERRQERPDMAVIVETLRRRAMQPLDLAAFAAEHQMSPATLRRRFTL 208 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 TG PK + L AR+D A LL + VA + D F+FS+ F + G +P Sbjct: 209 ETGLPPKAFQLRARMDHAKQLLATTDEKIEAVAAMIGLEDPFYFSRVFHEREGCSPREFR 268 Query: 284 KNTDQ 288 + Sbjct: 269 ARYRR 273 >UniRef50_B0N996 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N996_EUBSP Length = 258 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 85/237 (35%), Gaps = 5/237 (2%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYW 111 + + + +Y +G G L + L I+ +P + +Y + E YW Sbjct: 11 QNRAAGRVDYQLIYIHKGAGHYYLH-KKWENLSAGNILLFRPHEPQTYSYYFEEHPEIYW 69 Query: 112 MEFTPTSMMDIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQ 168 + FT +I I + E+ + + + ++ +I+ Sbjct: 70 IHFTGNECKEIIQKYNLHNCYIGEHSLLKTLFQEIIIELQIKKPYFEEMVLSNFLQILAT 129 Query: 169 WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 I +L+ L+ W++ MA S + LF + G Sbjct: 130 IARSHQQILSPLENDFSINRLVIQLNQKYMDDWNIESMAEYCKLSTGYFSHLFKKRMGSA 189 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 P +Y + R++ A L+ ++ ++A + F DS +FS+ FK G P ++ Sbjct: 190 PMKYLTELRIEKAKELIATNSMNLSDIAQMVGFTDSLYFSRVFKKTTGIPPKEFQQS 246 >UniRef50_B9K0A2 Transcriptional regulator AraC family n=18 Tax=Rhizobiales RepID=B9K0A2_AGRVS Length = 314 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 22/235 (9%) Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121 V +T+ G G + +N G ++ L P + H Y E G WE +W+ + Sbjct: 59 VLQHTISGAGNLRYENSTYRVTPGQTLLVLVPHN-HRYWLEPGGRWEFFWISMNGEEALR 117 Query: 122 I------------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169 I + QQ+V + + + + AE AI A+A + Sbjct: 118 IHNAILTAMGPIFNLNQQTVEHLADCSQRLIAGGAETPGRASAIAYEAAMALYDDVFGSH 177 Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229 L + R ++ +I + A+L Q SV +AA S A R+F G P Sbjct: 178 PTL-------SAEYRTMQHVIDHISANLDQSLSVEQLAAVSGLSRAHFSRVFAASEGMPP 230 Query: 230 KEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 E+ L RL A+ LL K SV E++ F + +FSK F+ FG +P+ Sbjct: 231 AEFVLHKRLKRAVKLLTKGSHLSVKEISTMCGFEEPNYFSKVFRRHFGASPTEFR 285 >UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CS68_PAESJ Length = 288 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 97/243 (39%), Gaps = 7/243 (2%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQY 110 ++ + W VY G G + +GE + + +P + Y + G W++Y Sbjct: 44 HFRQGAVFQYWAIVYIAGGSGTYRVDHGEAQRVTAGSLFLFQPGFHYDYGPDPGGYWDEY 103 Query: 111 WMEFTPTS----MMDIPVGQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAVAFLTK 164 + T + P+ +V++ GE + + L+ S + A L Sbjct: 104 YFTIEGTRYREWLEHWPILPNTVMHPGEDASSQNRIDRIFALMDSGTPADADRAALTLES 163 Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 ++Y W+ + + ++ +L+ L +L + + A A + + LRR Y Sbjct: 164 LLYDWVQSCQSSPAAQGKTARLAQLLEALSGTLHEPFDAAAFAERHHWALSTLRRTVSEY 223 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 TG EY ++ A + L +V E+A L + D F+FS+ FK G AP + Sbjct: 224 TGFALHEYVHRLKMAEAKNRLLNTEQTVKEIAAALGYGDVFYFSRLFKKITGEAPRLFRR 283 Query: 285 NTD 287 N Sbjct: 284 NMR 286 >UniRef50_A0Y944 Transcriptional regulator, AraC family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y944_9GAMM Length = 272 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 99/277 (35%), Gaps = 21/277 (7%) Query: 22 INENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80 + +N ++ S ++ YA H + + + +Y G G + + Sbjct: 5 LRQNPLTRACYPTSFGYYPYAKGH--------QMLRDDHSDNLLIYCEDGNGHVKTD--K 54 Query: 81 QI-TLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQQ-------SVIY 131 + +I L H Y + W YW+ F + + I Sbjct: 55 FYGPVTKGDVILLPSGHAHHYWASDDNPWTIYWVHFDGLQANQLIKELDFDAEQVVASIG 114 Query: 132 NGEIYNQELTEVAELITS-PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLI 190 + + + L S N A A +I+Y + + +++L Sbjct: 115 QQPLLASDFNRLLSLRQSGYRQTVFNYAAALTRQILYFLALQIRSSNTLRRHNFNLDELR 174 Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250 + + +++ + MAA S + + TG +P ++++ +++ A LL N Sbjct: 175 SLMLENIEGDLDLDTMAACAQLSRHHFADKYKKLTGISPVKHFIHLKMERACYLLDTSNN 234 Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 S +V+ L + D +FS+ FK G +PSA K Sbjct: 235 SAKQVSAHLGYTDPLYFSRLFKKVIGISPSAYRKGLR 271 >UniRef50_D1N947 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N947_9BACT Length = 303 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 12/234 (5%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFT 115 + + + + G G+ ++NG + L + + P D + Y + L + + + F Sbjct: 56 RLFEFYSLSHLISGGGRGWIENGRETDLTPGQAVVIAPGDRNRYGGSDTLPYVEDAVRFC 115 Query: 116 PTSMMDIPVGQQSVIYNGEIYN----QELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC 171 + + + + + + IYN + L + EL P A A L K++ Sbjct: 116 GPAAD---MMRNAGVISSGIYNLGGVRRLLPLIELAQDPSADAQINANIALQKLLVDL-- 170 Query: 172 LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 Y + ++ +E+L+A + + W+V ++A S LRR FLR+TG PK Sbjct: 171 --YNEHRRRNTLTPMEELVAEIKSRPDHWWTVEELAEFCNLSTDQLRRNFLRHTGMRPKR 228 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 Y + +L A LL + VA + D +HFS+ FK+ G +P + Sbjct: 229 YLEELKLRQAAELLVSSPLPIAVVAAKFGYADPYHFSRRFKNLTGVSPERYRRE 282 >UniRef50_A4BIK9 AraC-type DNA-binding domain-containing protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIK9_9GAMM Length = 271 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 7/246 (2%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 H R + ++ P I ++T G G I ++GEQ + + + + E Sbjct: 32 HLRPPYEVERMDPSIHT---LLFTSSGTGHITTEHGEQ-AIEPGSMTVIPAHTPARFEIE 87 Query: 104 GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163 G W+ W P + + + + + +I + + A Sbjct: 88 GDRWDMCWFLLLPAMHWNQWMPDVAEVRPTGQAPAVF-HLCHVIDQERYLDASYPKASFQ 146 Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 K+ + A+ + P R + A + SL + W+V +A SE RL Sbjct: 147 KLASYIELNLKANQPETPDR--LSAAFAQVEQSLHKPWTVGQVANLCYYSEPHFYRLCQE 204 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 GK+PK+ R+D A LL+Q + E+A L F D F+FS FK + G +PS Sbjct: 205 RFGKSPKQIIRQLRMDRARQLLEQTDWPLAELAGRLGFSDQFNFSNRFKRETGLSPSEYR 264 Query: 284 KNTDQH 289 +H Sbjct: 265 IKHAEH 270 >UniRef50_C4ZBP1 Two-component response regulator n=2 Tax=Clostridiales RepID=C4ZBP1_EUBR3 Length = 297 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 97/247 (39%), Gaps = 15/247 (6%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKNGE-QITLHGNCIIFLKPMDIHSYHCEG-LVWEQY 110 +P + +Y G N E + + I+ +P ++ Y G + Y Sbjct: 52 TYRPRGRLDYQIIYISSGLVHFHFDNPENETIIPAGHIVLFRPKELQKYEFYGKDKTQIY 111 Query: 111 WMEFTPTSMMDIP-----------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159 W+ FT + + + + + +++ + +TE+ + E + L Sbjct: 112 WLHFTGSDVKNTLRKYGFTDNKRVFNVGTSLEYEQVFKRIITELQRCQDNYEEMLMLLLR 171 Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 II+ + + Q++ I + + + +V + A++I S +W R Sbjct: 172 H--LLIIFNRKITTEHVIRNEFLDSQMDTAITYFNTNYNRSINVEEYASSIGMSISWFIR 229 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 F +YTG TP ++ R+ A LL+ S+ E+A + + + +FS+ F + G +P Sbjct: 230 SFRKYTGNTPVQFLTALRMTNAQVLLETTSYSINEIAGIVGYNNPLYFSRLFHKQKGCSP 289 Query: 280 SAVLKNT 286 S Sbjct: 290 SEYRARN 296 >UniRef50_C0X7J7 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X7J7_ENTFA Length = 276 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 104/273 (38%), Gaps = 12/273 (4%) Query: 24 ENVISSGISLISLWHTYADEHYRVIWPRDKKKP------LIANSWVAVYTVQGCGKILLK 77 +NV ++ +S++ + E + +K +P N WV Y G G Sbjct: 2 QNVFTNNVSILINDQPISQEFHLYEAGYEKCRPTKPTEFAPINYWVLHYCSDGEGYFSTP 61 Query: 78 NGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT----SMMDIPVGQQSVIYN 132 E+ + + + + Y+ W +W+ F + I + ++ I Sbjct: 62 FMEKQHITAGDLFMIPANCRNIYYPNRQNPWTYHWVGFVGDLSSQYLEKIGLTTENCILK 121 Query: 133 GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIAT 192 G + +++L + + I N+ + + ++ ++ ++ ++ Sbjct: 122 GTV-DKKLESLFKNIYQEAKKHNHFGSLSESFQLLNYLEHHSVTQHENQSQQLFNQIKMA 180 Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 +H + S++ +A+ ++L +LF RY P Y + +L A SLL++ ++ Sbjct: 181 IHENFSNNLSISQLASEYNIDRSYLFKLFQRYEQTNPSIYVQNLKLQKACSLLRKSSLTI 240 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 E++ F +FSK F K P + Sbjct: 241 TEISFEAGFSSPSYFSKFFFQKKEMTPRQYRQQ 273 >UniRef50_C4Z413 AraC family transcriptional regulator, arabinose operon regulatory protein n=18 Tax=Clostridiales RepID=C4Z413_EUBE2 Length = 276 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 97/245 (39%), Gaps = 15/245 (6%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKNGEQITL-HGNCIIFLKPMDIHSYHCEGL-VWEQY 110 +P + +Y GCG + T+ I+ +P ++ Y G E Y Sbjct: 28 TYRPRGRVDFQIIYIAAGCGHFHFDTVDNETIVPAGNIVIFRPKELQKYEYYGEDKTEVY 87 Query: 111 WMEFTPTSMMDIP-----------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159 W+ FT + + +I + + ++ + + E+ + E + L Sbjct: 88 WIHFTGSDVKNILRKYGFPDNERIFPVGTSMEYERVFKRIIIELQRCQDNYEEMLTLLLR 147 Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 II+Q K + +++ + + + + ++ + A + S +W R Sbjct: 148 H--LLIIFQRELTREHVLKNEYLNHEMDTAVTYFNENYNRDINIEEYATSKGMSVSWFIR 205 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 F ++TG TP ++ + R++ A LL+ S+ E++ + + + +FS+ F G +P Sbjct: 206 NFKKFTGSTPMQFIVALRVNNAQVLLEATNYSINEISKIVGYDNQLYFSRLFHKLKGDSP 265 Query: 280 SAVLK 284 K Sbjct: 266 RDYRK 270 >UniRef50_C7Q5G1 Transcriptional regulator, AraC family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q5G1_CATAD Length = 292 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 105/287 (36%), Gaps = 25/287 (8%) Query: 19 PLLINENVISSGISLISLWHTYADEH------------YRVIWPRDKKKPLIANSWVAVY 66 P E +S +++ T A+EH + + + + N + Sbjct: 9 PTAAGEEPWHPPVSEYAVYMTPAEEHRRLGLALYGAGWHTIAEHGIRWDARVLNCYALHL 68 Query: 67 TVQGCGKILLKNG--EQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM----- 119 +G G I + ++ + +L P +HSY + W W F + Sbjct: 69 VTRGSGWIEWGDRPRTRLPIKAPAAFWLFPGLVHSYQPDVGGWTITWALFDGPAAAGYES 128 Query: 120 MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179 +D V+ G+ + + E+ + + ++++ I + +G Sbjct: 129 LDFLSRTSPVVPLGDA--RPVRELFRELLTVVRTSGPHYEVSAGILVHRLITAVRDNG-- 184 Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239 P R+ + + L ++ D A + + LR TG TPKEY L RL Sbjct: 185 -PGLRE-SRAVRALTEHATDPVALQDHATRLGLTVTQLREEVRLATGSTPKEYILRVRLS 242 Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 A LL SV +VA + + D +F++ F + G +P+ + + Sbjct: 243 KAKDLLAATDQSVVQVARAVGYDDPAYFTRLFTQRVGLSPTMFRRGS 289 >UniRef50_UPI000174610C response regulator receiver domain protein (CheY-like) n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174610C Length = 280 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 15/266 (5%) Query: 26 VISSGISLISLWHTYADEHYRVIW-PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84 V+ SG H A W P + + A S++ G G++LL +G + Sbjct: 24 VLESGDCRELAAHRIARLGLDEAWMPYRRVRLRPAGSFILA-CTAGKGRVLL-DGRWQRV 81 Query: 85 HGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEV 143 + P ++++H EG VW W+ + + + VG S + E + + Sbjct: 82 GAGMVCMAPPRVLNAFHAEGAEVWRFAWLRYDEPAFVSPMVGASSPVLAAEGAMEIARAI 141 Query: 144 AELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATL----HASLQQ 199 L T E ++ K+++ WI L + ++ Q ++E + TL SL + Sbjct: 142 DGLRTEWEGHRDP-------KLLHHWIELAHGLARRAAQPFEMEARLWTLWTSVQQSLAE 194 Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259 W++ +A S LRR+ R G++P ++ R+ A LL+ + V VA + Sbjct: 195 EWTLESLARAYHSSGEHLRRVCQRELGRSPMQHLTYMRMQRARQLLETTSDKVEVVAGEV 254 Query: 260 NFFDSFHFSKAFKHKFGYAPSAVLKN 285 + D FS+AFK G APS + Sbjct: 255 GYRDGLVFSRAFKRWVGCAPSEYRRR 280 >UniRef50_C4FY02 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY02_9FIRM Length = 282 Score = 167 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 97/258 (37%), Gaps = 16/258 (6%) Query: 39 TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98 + + + P + + ++ + G G + + N L N L+ Sbjct: 16 QFDECGIQQFEPYQVYQYTVYQPYIIHWIASGKGSLEVDN-HCYPLTANQGFILRRGQQV 74 Query: 99 SYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE------LTEVAELITSPE 151 Y+ +G W YW+ F+ + + Q + + E + ++ S Sbjct: 75 KYYADGKEPWRNYWIGFSGQRLEEFLQFTQLADAHCIQFQDEGQCQAIIQDICHFNLSQT 134 Query: 152 AIKNNLAVA------FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVAD 205 N FL + + L + + ++ A+ + +V Sbjct: 135 QDANTFYWQMMKIFDFLYHAHLELVSLSAPRQQSNSSPAEVAAAYIY--ANYARPITVES 192 Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265 +A I S + L RLF ++ ++PK++ ++ RL A LL + +S+ +A ++ + D Sbjct: 193 IAQYIGMSRSALFRLFRQHYRQSPKQFLMETRLRQARQLLVESQDSIKTIAASVGYSDQL 252 Query: 266 HFSKAFKHKFGYAPSAVL 283 FSK FK FG +PS Sbjct: 253 VFSKIFKKTFGLSPSDYR 270 >UniRef50_B0NXL6 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NXL6_9CLOT Length = 282 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 109/291 (37%), Gaps = 24/291 (8%) Query: 3 GKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW 62 G L S +P E + +++ H Y YR + Sbjct: 7 GVLPKSQYFFFSPS-------EQFLKYNYGVVNCGHFYCHFGYRREREGNAYP------- 52 Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDI 122 + +Y +G + + + I + H+Y+ + E Y+ F + +I Sbjct: 53 LFIYVAEGELHLE-HDSQHEVAKKGEIFLIDCSKPHAYYVDKEC-EFYYFHFAGRAAYEI 110 Query: 123 ---PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG-- 177 + I + + + +L SP + ++ L+ + YQ +C++ A Sbjct: 111 TKDLILDNKGCLFHIINSDRIRKQMDLTISPLFYEQPISDVSLSCMAYQCLCMLQASNDV 170 Query: 178 ---KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 ++ + + + + L + ++ +++ S + LF TG +P EY Sbjct: 171 FTTEESDENSMLSSTMTYIREHLGHKLTLEELSRQASLSPYYFAHLFKEETGISPIEYVA 230 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 +++ A ++LK NS+ E+AD L + F AFK + G +P+ + Sbjct: 231 MTKINYAKNILKTTENSITEIADLLGYSSDASFINAFKKRAGLSPARFRRK 281 >UniRef50_A5ZYS8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZYS8_9FIRM Length = 304 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 116/286 (40%), Gaps = 14/286 (4%) Query: 21 LINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80 I ++ + + ++ + P ++ + NS++ +YT++G G +L +G Sbjct: 21 SIRFINTATPRARQTFFYVQEAGDFCTSSPYFTERENL-NSFLIIYTLRGKG-LLKYHGS 78 Query: 81 QITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEI 135 Q +LH ++ M+ H Y C + WE W+ F S + + ++ + + Sbjct: 79 QYSLHPGTTAYINCMEHHHYECLQKQNWEFLWLHFNGPSALGYYEEFMRSNFHILDSLDP 138 Query: 136 YNQE--LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-DPQRRQIEKLIAT 192 + E + + + + L+ + I+ + + + ++ ++ Sbjct: 139 FFMESTMRRILSITQRKDIHSEILSSCLIINILTRILIENDTENLSLGFMPTYLKTVLKA 198 Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 + Q+ S+ +A S+ L R F +Y G P EY + RL+ + +LLK + ++ Sbjct: 199 IDQHFQEPLSLESLAIAAGVSKYHLAREFKKYIGMPPNEYLIVTRLNHSKTLLKYEDLTI 258 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH----PTDAS 294 E+A + F H+ FK G P + + P+DA Sbjct: 259 EEIAYSCGFHQVSHYINLFKKHEGCTPLKFRREWHSNEAVKPSDAQ 304 >UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C01F8 Length = 265 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 8/229 (3%) Query: 64 AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSM-MD 121 ++G G + E I+F+ ++SY +++YW F + D Sbjct: 34 LYLILEGEGSVTCNKTEYYP-EVGDIMFVPKGSLNSYATNKDKPYKKYWCHFDADILSTD 92 Query: 122 IPVGQQSVIY----NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177 I V + N +I + ++ + S I A A L +II+ + Sbjct: 93 IAVYLSFPLLVKNANKKISYKLFAKLVKYHESKNPIDAIYAKALLLRIIHFYFSECEFVK 152 Query: 178 KKD-PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDA 236 D P + + KL+ + +L+++ ++ ++A + +L LF G+TP EY + Sbjct: 153 INDVPNQTVMGKLVKYIDENLERKITLTELAKFAHLNANYLCTLFSSTFGQTPIEYITNK 212 Query: 237 RLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 +++ A LL+ +++ E+++TL F F+FS FK + GY+PS ++ Sbjct: 213 KIEKAKILLRTTTDTIEEISNTLGFSSPFYFSAVFKKRIGYSPSQFRQS 261 >UniRef50_C7T9S5 Putative transcriptional regulator n=2 Tax=Lactobacillus RepID=C7T9S5_LACRG Length = 284 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 103/270 (38%), Gaps = 9/270 (3%) Query: 23 NENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82 EN ++ + + Y + PR + + ++ + +QG G + N E Sbjct: 3 KENKWLRTDRIVCPELSVFEVGYEDVHPRAPYQYEQLDYYLLHFVLQGEGLFFINN-EIH 61 Query: 83 TLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYN 137 L + P ++Y+ G W W+ D +G+ + IY + + Sbjct: 62 QLSRGQGFLIPPHTDNNYYPLVGNPWSYRWIGVRGPGAAAVFNDAGLGKTNFIYQHQDIH 121 Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD--PQRRQIEKLIATLHA 195 Q AE A+ +I+ + + + P ++ + + L Sbjct: 122 QMDDLFAEAYDYFSRDHLYGALGKFYEIVSALVDDYQQETRLGVLPNQQYALEAVEILKR 181 Query: 196 SLQQR-WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254 + D+A + +L R+F+R G +PK Y + R++ A+ LL+ +++G+ Sbjct: 182 EYADSTLRIDDVAERVKVERTYLYRIFMRNLGVSPKSYLMQLRINQAIELLRNTNDAIGD 241 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 +A + F FSKAF PSA K Sbjct: 242 IAIKVGFTSYSQFSKAFVKARRMTPSAFRK 271 >UniRef50_C1DME1 Transcriptional regulator AraC family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DME1_AZOVD Length = 310 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 26/243 (10%) Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121 + +T+ G G + + G+ ++ L P D H Y E G WE +W+ + Sbjct: 60 IVQHTLAGEGDLRFEGRHHRLRAGDTMLVLVPHD-HCYWLETGGSWEFFWIAMYGKEALR 118 Query: 122 I----PVGQQSVIYNGEIYNQELTE-VAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + + V+ + + L E VA LI SPE + ++ L+ D Sbjct: 119 LQRALLDERGPVLRLSDKTIECLAENVAALIRSPELTAGRASALAYESLMALHDDLLVQD 178 Query: 177 GKKDPQRRQIEKLIATLHASLQ----------------QRWSVADMAATIPCSEAWLRRL 220 D R + IA++ + VA +A S + RL Sbjct: 179 VALDAARTGV---IASIQNHIHACLRCEPDTLSPQAEDDELDVASLAQLAGLSRSHFSRL 235 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 F R G +P +Y L+ R+ A LL+ SV +A ++ D +FSK F+H F +PS Sbjct: 236 FARTVGMSPAQYVLNERMKRAAHLLEATDLSVKAIALSVGIHDPNYFSKLFRHAFSLSPS 295 Query: 281 AVL 283 Sbjct: 296 EFR 298 >UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-like protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A4H9_9BACT Length = 307 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 113/303 (37%), Gaps = 31/303 (10%) Query: 10 VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69 V TP +P ++ + +A+ ++ + P + N + V Sbjct: 6 VNLNTPARLPGILTVQQPEGPYYGRVI---HAESNHYTPPQSRRSPPFVHNHYHIVLVTA 62 Query: 70 GCGKILLKNGEQITLHGNCIIFLKPMDIHSY---------HCE----------GLVWEQY 110 G G ++ G+ + + F P H + + E G + Sbjct: 63 GRGFFEIE-GKNWSATPGEVFFTSPRQSHQFLNSGRDTTRYAEVTFEFVHPGSGSPIKML 121 Query: 111 WMEFTP--TSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164 ++F ++ ++P + ++ + ++ + + + A L + Sbjct: 122 GLDFAGLLSAWTNLPCEPVLSRRLPKALARVLAGKIEALVNRGRASPQPDDLELGALLAE 181 Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 I+ ++ P +I+++ + ++ + +A S + L R F Sbjct: 182 ILTVVFRNVFRKEAAAPD--KIDQVRDIIRTRYREELHLTTLAKDAGLSPSHLSRRFKAR 239 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 G++P Y L+ RL A LL+ +G S+ E+A + F D F+FS+ F+ + G AP + K Sbjct: 240 FGRSPISYQLELRLQSACELLRTRGESLAEIAAAVGFEDVFYFSRLFRRRLGEAPGSFRK 299 Query: 285 NTD 287 + Sbjct: 300 ASQ 302 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 104/270 (38%), Gaps = 31/270 (11%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-- 102 ++ +D+ + + + + G GK + + + II L P H C Sbjct: 21 WKGTRLKDEARYHSHDFIEMAFILSGHGKYKIAD-RLYDVSEGDIIILNPGQKHQALCTD 79 Query: 103 EGLVWEQYWMEFTPTSMMDIP---------------VGQQSVIYNGEIYNQELTEVAELI 147 ++++ D P Q +++ Q+L ++ + Sbjct: 80 PSNPATEFFVGLCDVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAM 139 Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADG------------KKDPQRRQIEKLIATLHA 195 + + + L + Q + L+ + + ++ +++++ Sbjct: 140 SVENDVCRSGRYIMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFED 199 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ-GNSVGE 254 ++ S+ +A + S ++ R+F TG TP + ++ RL+ A LL+ S+ E Sbjct: 200 HYSEKISLDQIAENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQE 259 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 VA + + D +HFSK FK +FG PS + + Sbjct: 260 VAAKVGYDDVYHFSKLFKKRFGMPPSKIRR 289 >UniRef50_C6CWX0 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWX0_PAESJ Length = 275 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 97/255 (38%), Gaps = 11/255 (4%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 H+ D+++ + + + G G + + + E+ T+ L P H Y+ Sbjct: 24 GHWNNQETIDRQQG--FPHYQWLQSTGGEGVLWIGD-EKYTVKPGQGFCLFPGVPHRYYA 80 Query: 103 EGLVWEQYWMEFTPTSMMDIPVGQQS------VIYNGEIYNQELTEVAELITSPEAIKNN 156 W+ Y++ F + D+ + + E+ L ++ + S Sbjct: 81 VRDPWDVYFISFGGSLAKDLLNQAGIKEPGLYSVTDSEMIVAHLRGISAMAESGLPFLGL 140 Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRR-QIEKLIATLHASLQQRWSVADMAATIPCSEA 215 L + + ++ + Q ++ +I + + ++ D+++ I + Sbjct: 141 ECSKLLYLFLLDLMKVVQVSTQSAEQYYMRLNPVIRYIEEHIDSVMTIQDLSSRIGVTPQ 200 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 +L RLF + G P EY R++ + L+ + + + E+A + F + +FS FK Sbjct: 201 YLCRLFKQLMGMRPMEYVNRERINRSKELMFLGREHKMQEIAAKVGFDSASYFSTVFKRM 260 Query: 275 FGYAPSAVLKNTDQH 289 G +P K H Sbjct: 261 EGMSPEQFKKMHGFH 275 >UniRef50_C2EN40 AraC family transcriptional regulator n=2 Tax=Lactobacillus RepID=C2EN40_9LACO Length = 276 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 100/269 (37%), Gaps = 11/269 (4%) Query: 27 ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86 + + + P+ P+ + ++ G G +G+ L Sbjct: 6 WGFNNQSYNAQFYISSGGFEKPHPKHSYGPMGRSGYMIHCVTSGHGIFKS-DGKVYHLKK 64 Query: 87 NCIIFLKPMDIHSYHCE-GLVWEQYWMEFT----PTSMMDIPVGQQSVIYNGEIYNQELT 141 I +++P + W YW+ F P M I + ++ I + + Sbjct: 65 GDIFYIQPHKTTYMEADENDPWTFYWVRFIGNLVPKYMKRINLSYKNPIMSQQDLPTVFQ 124 Query: 142 EVAELI-----TSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHAS 196 +V +++ + P+ + + + ++ + + + Sbjct: 125 DVIDIVEYSQNSGPQDFYYQSKMFAILNALELHFPKENPHKNVTTTSDIYDRALRYIANN 184 Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256 +++ SV D+ + ++L R+F +++ P+E+ + RL+ A +LK + N+V VA Sbjct: 185 YEEQISVHDLVRYLNIDRSYLFRIFKKHSQTNPQEFITNYRLNKASEMLKSKENTVEYVA 244 Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + F F + FK K+G +PS K Sbjct: 245 LSCGFLSYQSFFRFFKKKYGISPSDYKKK 273 >UniRef50_C6D3L8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L8_PAESJ Length = 274 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 99/243 (40%), Gaps = 15/243 (6%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYW 111 + ++P ++ ++G G++++ NG+ + + FL P HSY W+ W Sbjct: 31 ETERPEGFPDYLMQQVLEGFGEVVV-NGKAYKVEAGDVFFLYPDIPHSYKPLNQKWKVSW 89 Query: 112 MEFTPTSMMDIPV------GQQSVIYNGEIYN---QELTEVAELITSPEAIKNNLAVAFL 162 + F + + + E+ Q LT + + ++ L L Sbjct: 90 VSFNGREADQMLLFAGISESGTGRLKTNELIKPLEQMLTLAMDNDQEADLERSKLLYGLL 149 Query: 163 TKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFL 222 + YQ + Y+D + D +++ ++ + +LQ+ ++ ++A + +L R+F Sbjct: 150 IDLKYQLLSPSYSDQEFD----RVKPVLHYIENNLQRPLTLIELAGVATVTPQYLCRMFQ 205 Query: 223 RYTGKTPKEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 + P EY R+ + L+ + + E+A + F S +F F+ G P A Sbjct: 206 QTMNIRPMEYINQQRIKRSKQLMFQHPAMRMYEIAGRVGFESSSYFGVVFRKLNGMNPEA 265 Query: 282 VLK 284 K Sbjct: 266 FKK 268 >UniRef50_C4DTW1 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DTW1_9ACTO Length = 431 Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 7/229 (3%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTS 118 + + G G++ L + G C +F + H + M FT T Sbjct: 7 LTDHLLWHVHDGAGELRLDDRHVRLRPGFCAVFAPGDAPVATHDPRHPLLVFGMHFTATG 66 Query: 119 MMDIPVGQQSVIYNGEIYNQELT-EVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177 V +Q +++QE +A ++L + Q++CL++ + Sbjct: 67 FDGDLVPEQRW---CRLWDQEFAVRLARHCDYAHRRGDDLGQRQAVLGLEQFLCLLWDNV 123 Query: 178 KKD---PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 + P +E + + + W+VA +A S A R F +TG +P Y + Sbjct: 124 TRPAPGPGDAAVEDIARAVRQEPSRDWTVATLAKRANLSRAQFTRRFTAHTGYSPARYVI 183 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 ARLD A LL + SVG+VA TL + D +FS+ +K G +PS Sbjct: 184 RARLDRARQLLTETNMSVGQVAATLGYPDVGYFSRQYKVHTGSSPSRDR 232 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 106/260 (40%), Gaps = 13/260 (5%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101 + +Y P+ ++ I + +G G + + + + ++ + + SY Sbjct: 23 EAYYTQCSPQWRELDYIPSYNKFYLICEGEGWLNIDGQDYRPV-PGQLVHMPAHVLQSYS 81 Query: 102 C-EGLVWEQYWMEFTPTS-------MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI 153 + +YW FT T ++IP + + + E+ EL + + Sbjct: 82 AVSDRPYSKYWCHFTATMGEMDLFQWLEIPPILDISPDHTDSLTKLFRELVELYQNRSYL 141 Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQR----RQIEKLIATLHASLQQRWSVADMAAT 209 A L +II ++ K P R +++++ A + A+L + ++ +A Sbjct: 142 ARIREKAILLEIIALFLSHSDTHLKFVPGRLGEIERLKQIEAFIEANLSEALTLEQLAKH 201 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 + +L R F ++ P +Y R+ A SLL ++ E+A+ + F D+ HF+K Sbjct: 202 VHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAKSLLGTTDLAIKEIAELVGFPDTNHFAK 261 Query: 270 AFKHKFGYAPSAVLKNTDQH 289 AF+ + +P+ ++ Sbjct: 262 AFRKEASCSPTEYRHRAGRN 281 >UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivorax RepID=Q0VT12_ALCBS Length = 305 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 108/285 (37%), Gaps = 18/285 (6%) Query: 15 PYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKI 74 P ++ + ++ + SG + +R+ ++++P + +Y V G G++ Sbjct: 29 PPSVLSSVRDHPLCSGCMPHGVGFYPQASGHRM----ERQRPA---DNLLIYCVSGAGEL 81 Query: 75 LLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSV 129 G+ + ++ L H YH W YW+ +I Sbjct: 82 AY-GGQSQPVEAGDLLLLPAGFSHRYHANPQQPWSIYWVHLGGHEVQRYFDEIAGQPDGG 140 Query: 130 IYNGEI-YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC---LMYADGKKDPQRRQ 185 I + + L E + + + + + ++ + LM + Sbjct: 141 IRRVRVGVHSRLAEDFQALMAAATNAQPEHLVYAANLLRSLLAYASLMRRQHQVRHATLD 200 Query: 186 IEKLIATLHASLQQRWSVADM-AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 + ++ + L ++ +R S+ D+ AT S R + R TG+TP + + ++ A L Sbjct: 201 VTRVNSYLQTAIDRRLSLDDLITATSDLSRYHFIREYKRQTGQTPMQAFQRIKVSHACYL 260 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 L +SV +A L D ++FS+ FK G +P K ++ Sbjct: 261 LDISDDSVATIALQLGHDDPYYFSRLFKKMMGISPQKYRKERGKN 305 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 101/265 (38%), Gaps = 29/265 (10%) Query: 45 YRVIWPRDKKKPLIANSWV----AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS- 99 Y P D P +A W ++ +G G+I Q I + P +H+ Sbjct: 107 YPCTIPGDF--PSVALHWHKSMEIIFVKKGTGRIQTGRNMQ-EARSGDIFVMPPGTLHAI 163 Query: 100 YHCEGLVWEQ----YWMEFTPTSMMDI----------------PVGQQSVIYNGEIYNQE 139 Y G E + +EF D+ P V + + Sbjct: 164 YAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASGQLLQPAVFSPVDAGYKQISAC 223 Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD-PQRRQIEKLIATLHASLQ 198 L EL ++ E A L +++ + + ++D P ++++++ + Sbjct: 224 LRRAEELCSARERGYELGVKAALLELLLYLLRMCPEAPERDTPDMERLKRVLQRIEQDYA 283 Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADT 258 + +V DMAA CS + R F R TG +P Y + RL A L++ + + +A+ Sbjct: 284 KPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLAAAAENLRETDDKILVIAEN 343 Query: 259 LNFFDSFHFSKAFKHKFGYAPSAVL 283 F + +F++ FK ++G P A Sbjct: 344 AGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_C8Q370 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q370_9ENTR Length = 293 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 95/250 (38%), Gaps = 15/250 (6%) Query: 54 KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV--WEQYW 111 +P ++ T++G G I GE + + ++ P +H Y W+ W Sbjct: 44 HRPEGMKGYMLNLTLKGEGVIRHAEGEFHCV-ADEMLLFPPGVLHHYGRAKESPAWDHLW 102 Query: 112 MEFTPTSMM-----------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160 + F P +I + + + +V + E + LA+ Sbjct: 103 IYFIPRPYWIDWLHWDRTEGNIGRMPLGSSADSQQIANQFKDVIRWNAASEPLAEALAMN 162 Query: 161 FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 L +II + A ++ + +I+ + L+ L + + D+A S + L + Sbjct: 163 TLERIILELFQRQPASNHRN-RDPRIQTVCHYLNEHLAEDVRIDDLARMTYLSSSRLTHI 221 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 F + G T + R+ A LL+Q S+ ++A + + D +FS+ F +P Sbjct: 222 FRKEMGNTIFGWRESQRISRACDLLQQTQLSITQIARAVGYEDPLYFSRIFSQHRHLSPR 281 Query: 281 AVLKNTDQHP 290 K D+ P Sbjct: 282 EYRKKFDRIP 291 >UniRef50_C6IZ62 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZ62_9BACL Length = 293 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 96/261 (36%), Gaps = 19/261 (7%) Query: 35 SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLK- 93 + + + D Y PL+ + YT+ G G L + + Sbjct: 26 AGYDSITDPSYYWDGLERTDGPLL----LFQYTLSGEGVFELGE-RSHRVTAGQAFLAEI 80 Query: 94 PMDIHSYHCE--GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEI----YNQELTEVAELI 147 P Y+ + WE ++ F P + +P+ ++ + G + + +A +I Sbjct: 81 PSSHRYYYPQEASAPWEFLFLLFRPNVV--LPLWRKFLSEAGAVPYLPEDSAPVRLARMI 138 Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMY-----ADGKKDPQRRQIEKLIATLHASLQQRWS 202 + + +YQ++ + + K+ +++ + ++ Q S Sbjct: 139 ITDAGAGRITDPYIASSCVYQFVTELARMQVTSQKNKENWPESVKRAAELMESNYAQMIS 198 Query: 203 VADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFF 262 + ++ + S+ L R F TG TP Y R + A+ LL+ S+ +A+ + + Sbjct: 199 IDQLSEHVGLSKYHLIRRFSDSTGLTPGAYLTRVRTEKAMDLLRGTSLSIETIAERVGYS 258 Query: 263 DSFHFSKAFKHKFGYAPSAVL 283 +F KAF+ G P Sbjct: 259 SGSYFIKAFRRLTGLTPGEFR 279 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 8/245 (3%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWMEFTPT 117 + Y G + + + L+ I P HSY G+ +++ + FT Sbjct: 25 HEYFELYYLESGK-RYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKRLVLYFTKE 83 Query: 118 SMMDIPV----GQQSVIYNGEIYNQELTEVAELITSPEAIKN--NLAVAFLTKIIYQWIC 171 + V Q + +Y + N+ + L+ E N A+ F+ I + Sbjct: 84 MIAVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSEEALYFILNQILILLL 143 Query: 172 LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 + K ++ +I +I LH + ++ ++A S +L R F +YT T + Sbjct: 144 RNSTETAKPEKQSRITSIIHYLHENYTYPITLNELAEQFYLSPYYLCREFKKYTNSTIVQ 203 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPT 291 Y R+ A L + SV E++ + F + HF++ ++ G +PS K + Sbjct: 204 YINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKSRKQAKERSA 263 Query: 292 DASPH 296 H Sbjct: 264 AMERH 268 >UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4P0_BREBN Length = 515 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 97/234 (41%), Gaps = 4/234 (1%) Query: 60 NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM 119 N+ V Y +G ++ + +Q+ G ++ I C+ Y + + Sbjct: 20 NTHVLCYVAEGRAEMTVDGQKQVLDAGKLLLLHPTTKIEELRCQSGPLHIYRLHYAEARR 79 Query: 120 M--DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177 + ++ V V E ++ ++ + ++Y+ + ++Y + Sbjct: 80 DQHESAPERKEVEALAVSTPASFLTVLEELSQLTRKRDYSSFLRSQALLYELLGVVYDEQ 139 Query: 178 KKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 KK ++ IE+ IA + ++ + + + + + R F R TG TP EY Sbjct: 140 KKKEEKGIGTIEETIAYMQKHYRESLELGSLPSLAGLTPSSYCRAFKRVTGMTPGEYLTG 199 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 R++ A LL G SV +VA + + D +FS+ FK + G +P +K +DQ Sbjct: 200 LRMEHAKELLAHSGGSVKDVARNVGYTDELYFSRLFKKREGLSPQIYMKQSDQR 253 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 99/235 (42%), Gaps = 11/235 (4%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPT 117 + +Y G G+ +L+ G++ L ++ + P +H + ++ Sbjct: 40 HDFCEILYVAGGAGEAILE-GKKFRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAIRDF 98 Query: 118 SMMDIPVG-----QQSVIYNGEIYNQE---LTEVAELITSPEAIKNNLAVAFLTKIIYQW 169 ++ +P G + V+ GE + L E+ + +S ++ ++ ++ Sbjct: 99 AVPGLPAGCLSQEKYRVLSCGEYRYKMDIYLRELLQETSSQIEFYQEISQGLVSALLVLV 158 Query: 170 ICLMYADGKKDPQRRQ-IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 + L+ + + + Q +K+ L + ++ ++ T+ S+ +L LF TG + Sbjct: 159 MRLIRINPEDEAALSQECQKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFKEQTGVS 218 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 P +Y R++ A LL + V EV+ + + + +FS+ FK +G +P Sbjct: 219 PIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 115/297 (38%), Gaps = 31/297 (10%) Query: 17 NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76 NI E+ +SS + + T H W +P + VY +G + Sbjct: 7 NILPKAWESFLSSSTFIPVIVKTIERFH-DTSWH---MEPNKHECFEMVYIKRGKAVFEI 62 Query: 77 KNGEQITLHGNCIIFLKPMDIHSY------HCEGLVWEQYWM-EFTP-------TSMMDI 122 G + N II +KP H + CE +V ++ F + +D Sbjct: 63 A-GYPAEIGPNDIIIIKPNQPHKFIVKSESGCEFIVLSFKFVNRFDGQYSDVSLENFLDF 121 Query: 123 PVGQQSVIYNGEIYNQE------LTEVAELITSPE---AIKNNLAVAFLTKIIYQWICLM 173 G+++ + +Q+ L + + +P+ N L V L +I + + + Sbjct: 122 VSGKETGPFITLKVSQKNDIIVLLNRILKERENPDIGSEFLNYLLVMELFVLISRALKME 181 Query: 174 YADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 + + K+ + I+ + ++ + ++ S+ D+A + S ++ R F G +P Sbjct: 182 WENSIKNKSPKIKELIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPI 241 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 Y L R++ A LLK N + ++A ++ F + F+ FK P KN Sbjct: 242 NYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298 >UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibrionaceae RepID=A6B487_VIBPA Length = 279 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 98/246 (39%), Gaps = 15/246 (6%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWM 112 +P ++ T QG G I N + + ++ P H YH + W W+ Sbjct: 36 RPNGMKGFIINITSQGEGTIFHGN-DAFDVKTGDLLLFPPSATHFYHRKKDNASWFHRWV 94 Query: 113 EFTPTSMMDIPV----GQQSVIYNGEIYNQELTEVAELITSPEAI-------KNNLAVAF 161 F P + + + + V + N ++++ L E I +++LA+ Sbjct: 95 YFRPRAFWNDWLCWHEQRNGVYLTQGLDNSTISQIERLFIDIEYISKSDMPYRDDLAINL 154 Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 L +++ + + D P ++ + + + +L Q +++ D+A S + L LF Sbjct: 155 LEQLLIR-CKTIQPDVVSKPLDPRVIEAMNYMTQNLNQNFTLEDIADFTCLSASRLGHLF 213 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 G T ++ D R+ A LL SV + + + D +FS+ FK K G +P Sbjct: 214 RDEVGMTITQWRDDQRISRAKQLLVTTNYSVNHIGRIVGYTDPLYFSRVFKRKAGASPKL 273 Query: 282 VLKNTD 287 + Sbjct: 274 YREQIS 279 >UniRef50_UPI0001788D3A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D3A Length = 291 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 94/273 (34%), Gaps = 14/273 (5%) Query: 32 SLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIF 91 + + LW + H +K P + + G + +G ++L + Sbjct: 23 TQLGLWIFKSGSHPFFT---EKVGPRSVEFYSIHFVASGKVRFGW-DGSSVSLSEGDLFC 78 Query: 92 LKPMDIHSY--HCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNG-------EIYNQELTE 142 L P +++Y C+ W F M I + + + Sbjct: 79 LFPGSVYTYVKDCDEPSTMITWTAFMGELMPSILNHVDLCPERPYRRNAFRDDALAVIKD 138 Query: 143 VAELITSPEAIKNNLAVAFLTKIIYQWICLM-YADGKKDPQRRQIEKLIATLHASLQQRW 201 + L+ P+ + ++ ++I+ +E + + + Sbjct: 139 IQRLLRQPQQDHSLQLMSLGFQLIHSIDPNRDQHLPAASAASDWLESVPGYMGLHCTENL 198 Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261 SV ++AA + R F R G +P Y ++ A LL +G S+ + A +L + Sbjct: 199 SVEELAAWAGVHRSHFTRAFTRRYGISPSRYMQQLIMEKATRLLSAEGTSITQTALSLGY 258 Query: 262 FDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294 D F FS+AF FG PSA +K + Sbjct: 259 SDLFTFSRAFTRYFGMTPSAFVKANRPSSRTSE 291 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 95/250 (38%), Gaps = 22/250 (8%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFT 115 P + + VY +G + +G++ L +F+ IH E E Y + F+ Sbjct: 36 PHWHDEFEIVYLEKGTASFRV-DGKEYFLGPKQFLFVNCGSIHGGKAEDNP-EPYAIVFS 93 Query: 116 PTSMMDIP-----------VGQQSVI----YNGEIYNQELTEVAELITSPEAIKNNLAVA 160 + + V ++ ++ + E + ++ + + L Sbjct: 94 LSMLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHTRELISNIITVWKEKPKGYELLVKG 153 Query: 161 FLTKIIYQWICLMY-----ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 +L I Y Y D + D + +I+ + ++++ + +A S+ Sbjct: 154 YLFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDIDIDLLAKLANLSKF 213 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 + RLF T TP +Y R++ A+ L+K S+ E+A + F + +F K FK Sbjct: 214 YFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYV 273 Query: 276 GYAPSAVLKN 285 G P KN Sbjct: 274 GVTPFKYKKN 283 >UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K3_PAESJ Length = 296 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 99/256 (38%), Gaps = 14/256 (5%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLK-PMDIHSY 100 D+HYR PL+ + YT G G + E + + + P D Y Sbjct: 37 DQHYRWDGLTRNDGPLL----LFQYTFDGEGIYE-RGTETLRIQAGQAFMTEIPGDHRYY 91 Query: 101 -HCEGLVWEQYWMEFTPTSMMDI------PVGQQSVIYNGEIYNQELTEVAELITSPEAI 153 +G W ++ P+ ++ +G + G + L + E + Sbjct: 92 FPPDGSHWSFIFVLIRPSLILPNWEEVKKQLGDTPFLPAGSRPIRLLQSMYEEAHAGRVK 151 Query: 154 KNNLAVAFLTKIIYQWICLMYADGK-KDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 + A +++ + I + A + ++++ ++ + A + S+ +A + Sbjct: 152 EPYTASSYVYQFISELCRFALAPQEDAKEWPLKVKEAVSYIDAHYENMISLDQLADQLSL 211 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 S+ L RLF R G +P +Y R+ A+ LLK+ SV +A+ + + +F K F+ Sbjct: 212 SKYHLLRLFTRTVGMSPNDYLNQVRIKEAIRLLKESDWSVERIAEQVGYSGGSYFIKWFR 271 Query: 273 HKFGYAPSAVLKNTDQ 288 G P + Q Sbjct: 272 KITGETPGSFRHGEGQ 287 >UniRef50_C7MF03 DNA-binding domain-containing protein, AraC-type n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MF03_BRAFD Length = 311 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 89/236 (37%), Gaps = 8/236 (3%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTP 116 + + V G G G + I+L+P HSY + W ++W+ F Sbjct: 72 RVLSRHALVLVSSGAGTFTDPAGTH-PVTAPAWIWLEPGTPHSYGPDAHGWTEHWVLFEG 130 Query: 117 TSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL 172 VG V+ G E E+ + ++ A + ++++ + Sbjct: 131 VGARTYRSHSGVGDGHVLRRGGPEPAERAEIFAALHRAGSVPGRRAQLHASSLVHRLLGA 190 Query: 173 MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232 + D ++DPQR + + A+ + SVA AA R R TG TP E+ Sbjct: 191 LLGDAEEDPQRTSVTHTVL---ATATEDLSVAQRAALSGVGVDEFRAQIRRATGLTPHEF 247 Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 L R A LL + + +VA + D+ +F++ F + G AP + Sbjct: 248 VLTTRFSRAQELLARSDLPIWQVAAEVGIDDASYFTRLFTRRIGVAPRTFRHEQRR 303 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 87/244 (35%), Gaps = 12/244 (4%) Query: 64 AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFTPTSMMDI 122 Y + G G+ L G+ + + ++ + P H+ E + + Sbjct: 44 LFYCLSGEGQFYLA-GQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVASMEFLFS 102 Query: 123 PVGQQSVIYNGEIYNQE--------LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY 174 I+N + L E + E + +L L ++ + Sbjct: 103 KADTNYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVRCTTISLQ 162 Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 + + R+ ++ L + ++ S+ +A ++ +L F R G +P Y Sbjct: 163 LEEAAPTENRECAEIKRYLDTNYREDISLDLLAELAHLNKYYLAHTFQREYGISPITYLN 222 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ--HPTD 292 R++ + +L G S+ ++++ + F +FS+ F+ G P+ + T Q P Sbjct: 223 RRRIEESKHMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGMTPNEYRRQTRQGKRPAP 282 Query: 293 ASPH 296 H Sbjct: 283 TKRH 286 >UniRef50_C5BNS5 Response regulator receiver domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BNS5_TERTT Length = 290 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 101/276 (36%), Gaps = 15/276 (5%) Query: 17 NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76 +P L + NV +GIS + R + +KKP + ++T++G G++ Sbjct: 24 RVPTLKSLNVAIAGISQL-----------RGDYCVARKKP---DYHTILFTLEGEGELHT 69 Query: 77 KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIY 136 G + + N + L W W T+ + + Sbjct: 70 HKGRTL-IPANTLTLLPARQPFLITLSREHWATTWFCLEDTAHWSHLRQPDASVRYSSEA 128 Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHAS 196 + L + ++ L+ ++ + R++E+L + Sbjct: 129 AALYYLLGHLYYENDPDMQTTPLSHLSHYLHNALGNNRQREHLSEPERRLEQLFGDIQQQ 188 Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256 L W++ MA + S + RL ++ ++P + + R++ A LL S+ ++A Sbjct: 189 LHVNWTIERMAERVHYSPSHFHRLCQQHVNRSPIQQLIHLRMERAKQLLSDTHWSLNQIA 248 Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292 + + D F+FS FK G +PS + ++ Sbjct: 249 SAVGYSDVFNFSNRFKKSTGVSPSQFRTSPGHRSSE 284 >UniRef50_A5Z7W7 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z7W7_9FIRM Length = 334 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 16/239 (6%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPT 117 + +Y G + +Q ++ I+ KP ++ Y + YW+ FT Sbjct: 81 RQDYQLLYVKHGT-IYYYIDKKQYSISAGGILIYKPSELLHYEFFLKDAPDIYWVHFTGD 139 Query: 118 SMMDIPVGQQSVIYNG----------EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167 ++ +I + I+++ ++E+ I + L + L I Sbjct: 140 NVDNILGELNLSTKHAFMGTICPEYDTIFDKIISELLNRKLHFMDISSILMLELLYTISR 199 Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 + Y K D +EK++ + + + S+ +A + S +WL + F ++ G Sbjct: 200 DICTITYISSKND---LILEKVLEIFNTNYPNKISITSIAKELNYSSSWLSKTFTKHFGL 256 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 +PK Y + R++ A S+L S+ +VA+ F D +FS+ F + G PS + Sbjct: 257 SPKAYLTNLRIEKAKSMLLST-MSIRQVAEQTGFPDQMYFSRVFTNAEGITPSQYRQKH 314 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 100/252 (39%), Gaps = 25/252 (9%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWMEFTP 116 + + G GK + +G+ + I L P H ++ ++ F+ Sbjct: 35 HDFIEFAVIMGGKGKFYI-DGKDYEVEEGDFILLNPGTYHRSKAGYSKEGLKECYIAFSG 93 Query: 117 TSMM-------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169 S G +I + + + ++ ++ + L + Q Sbjct: 94 VSFKGCKSGYFPSFKGNGKIIKMADRMKKNIFQICTVMNKEARECSAGRYFMLKAYLIQI 153 Query: 170 ICLMYADG--------------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 +CL+ + + ++ +++++ + + +++ S+ +AA + S Sbjct: 154 LCLVVREQKEEKQEGEGKGYIFQSTGKKYVVQQIMKYMEENYREKISLEQIAANMYLSSF 213 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLK-QQGNSVGEVADTLNFFDSFHFSKAFKHK 274 ++ ++F TG TP Y + R++ A +L+ + EVA + + D++HFSK FK Sbjct: 214 YIAKIFKSETGDTPINYLIRLRMEKAKEILEISPEEPIKEVAAAVGYSDAYHFSKLFKKH 273 Query: 275 FGYAPSAVLKNT 286 +G +P K++ Sbjct: 274 YGISPLYYKKDS 285 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 98/236 (41%), Gaps = 12/236 (5%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWMEFTPT 117 + + Y ++G ++ + GE L N + P HSY + + +++ + F+P Sbjct: 33 HDFFELYYLLEGE-RMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPFKRIVLYFSPD 91 Query: 118 SMMD----IPVGQQSVIYNGEIY--NQELTEVAELITS---PEAIKNNLAVAFLTKIIYQ 168 + + + ++ +++ E Y NQ L+ + L P + L ++ Sbjct: 92 LIANDTICQLLSEKELLFVNEGYIPNQILSLLLSLTHEIDVPGKYHDAYICNQLNGLLLN 151 Query: 169 WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 + L + K P+ R K + +H + SV +A + S L F TGKT Sbjct: 152 MLRLDFEAVKSIPKTRS-AKAVDYIHNHYMEDISVNQLAEILYVSPYHLCHEFKNATGKT 210 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 +Y R+ A L+ + ++ +++ + F + HF++ FK G AP K Sbjct: 211 IIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFKKITGVAPREKKK 266 >UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXJ2_PAESJ Length = 289 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 17/268 (6%) Query: 37 WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFL--KP 94 W + + Y ++P + YT+ G G I + + I L + Sbjct: 24 WQSIQNPDYSFT---GDERPD-FGHVIFQYTLNGLGYIEYEQ-QCIPLPRGTGFLVKVPS 78 Query: 95 MDIHSYHCEGLVWEQYWMEFTP---TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPE 151 + Y E WE W+ + + + D+ + Q+ I + + + +L+ S Sbjct: 79 KHRYFYKSEDEPWEVLWLNLSGDEASRIWDLVIAQEGPIIRRDPNSPIIHAFRKLLRSIA 138 Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQR------RQIEKLIATLHASLQQRWSVAD 205 K L+ +Y+W+ + ++ + I++ + Q ++ Sbjct: 139 EEKITDKYQ-LSAKVYEWMIALVQTSREVSREISTSSSSLIQRAKDFMKQHYAQPLTLDQ 197 Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265 +A ++ L RLF + +P Y D R++ A++LL+ V + + F +S Sbjct: 198 LAEHCGVNKYHLCRLFQKSDQTSPLAYLRDRRMEAAVALLRTTELPVQTIGEMCGFENSS 257 Query: 266 HFSKAFKHKFGYAPSAVLKNTDQHPTDA 293 +F K F+ P + P DA Sbjct: 258 YFGKVFREYMSMTPKEYRMKKIEFPYDA 285 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 90/244 (36%), Gaps = 12/244 (4%) Query: 64 AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFTPTSMMDI 122 Y + G G+ LL +G+ + + ++ + P H+ E + + ++ Sbjct: 75 LFYCLSGEGQFLL-SGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVSGIEILFG 133 Query: 123 PVGQQSVIYNGEIYNQE--------LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY 174 I+N + L E + E + +L L ++ + Sbjct: 134 KADSTYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVRCTTLSLQ 193 Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 + R+ ++ L + ++ S+ +A ++ +L F + G +P Y Sbjct: 194 VEESPRSDNRECVEIKRYLDNNYREEISLDTLAEVAHINKYYLAHTFQKAYGISPITYLN 253 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD--QHPTD 292 R++ + +L G S+ ++++ + F +FS+ F+ G P+ + Q P Sbjct: 254 RRRIEESKYMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGLTPNEYRRQVRQGQRPAP 313 Query: 293 ASPH 296 A H Sbjct: 314 AKRH 317 >UniRef50_D1N759 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N759_9BACT Length = 261 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 13/258 (5%) Query: 32 SLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVY-TVQGCGKILLKNGEQITLHGNCII 90 ++ + + HY V P+ P + + +Y V GCG+ L+ N + Sbjct: 11 TIHAPVRVRSTGHYTV--PKGWSDPPLVKPILELYWCVSGCGRFGSGAS-GWLLNENQVC 67 Query: 91 FLKPMDIHSYHCEGLVWEQYWMEFTPTS---MMDIPVGQQSVIYNGEIYNQELTEVAELI 147 F P D H E ++ +W+ + ++D ++ + ++A I Sbjct: 68 FYFPGDRHEITAESASFDYWWLTIDGPNVPFLIDSFRLERPSRPVAPCPEELFLKLAREI 127 Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQR-WSVADM 206 A A +I+ + + + I + + SV + Sbjct: 128 RDLGRDGEYRAGATAYEILTRAML-----PPSGEESGLILRFKQLVEERYDDPALSVRSL 182 Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266 +A + + L RL R+ G P+EY RL +A+ +L + SV E+A+ F D + Sbjct: 183 SAALGVHRSTLTRLVTRHCGMPPQEYLTGFRLQIAMQMLHESAVSVKEIAEATGFSDQNY 242 Query: 267 FSKAFKHKFGYAPSAVLK 284 F K F + G P+ + + Sbjct: 243 FGKVFLKRLGKTPTQMRR 260 >UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=3 Tax=Enterococcus faecium RepID=Q3XWE2_ENTFC Length = 288 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 101/244 (41%), Gaps = 12/244 (4%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQY 110 K +S++ G G + NG++ L ++F+ + +++ E +W Sbjct: 44 HTSKRSGLSSYLCFLVESGSGTLEY-NGQKYMLQAGGMVFIDCLKPYAHESSEDDLWTLR 102 Query: 111 WMEFTPTSMMDIP-----VGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAVAFLT 163 W F M ++ G Q V + ++Y + + E+ + + +++ A L+ Sbjct: 103 WCHFNGIGMTEVYKKYLERGGQPVFRSAKFDLYAKLMMELHRIAEGQDYVRDMKINAALS 162 Query: 164 KIIYQWICLMYADGK---KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 +++ + + K +R +++ + L + ++ ++A ++ +L ++ Sbjct: 163 QLLILLMEDAWNPDKIPNMSTKRMELQNIKQYLDDHYTDKITMDQLSAEFFINKQYLHKI 222 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 F G T Y R+ A LL+ S+ E+A+ + D+ +FS+ F G PS Sbjct: 223 FRETYGITIVNYLNQKRITQAKHLLRFTNLSMEEIAEKIGMTDANYFSRTFFKVEGVRPS 282 Query: 281 AVLK 284 K Sbjct: 283 EFRK 286 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 35 SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94 ++ +Y W + + K + ++ + G K+ G L IIFL Sbjct: 11 EPYYPVVKFYYYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEG-SYQLKKGQIIFLDA 69 Query: 95 MDIHSYHCEGLVWEQYWMEFT----PTSMMDIP---------------VGQQSVIYNGEI 135 H + +EF+ T+ Q ++++ + Sbjct: 70 GTRHRLIV-SERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLLHDTDD 128 Query: 136 YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHA 195 Q L + + + + L++ + + L A + Q+ +++ +A +H Sbjct: 129 TYQCLRRLILEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKRALAYIHQ 188 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 + + SVAD+A ++ +L+R+F +TGK+ E+ + R++ A ++LKQ S+ ++ Sbjct: 189 NYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDISITDI 248 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 + +FS FK PS K Sbjct: 249 PHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 89/250 (35%), Gaps = 21/250 (8%) Query: 54 KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS--YHC--EGLVWEQ 109 K+P + + Y + G K+ + N + L + + P+++H Y E + Sbjct: 33 KRPHYHSYYEIYYLLSGKCKMFI-NQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGI 91 Query: 110 YW--------MEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161 Y+ + Q E + ++ E+ + E ++ Sbjct: 92 YFSRDTVTSFLSLCGREAFGHIFSQPKRTIPSE-FRPKIEELLAQMQDEEKQGDSYCQIQ 150 Query: 162 LTKIIYQWICLMYADGKKDPQRRQIE-------KLIATLHASLQQRWSVADMAATIPCSE 214 L +++Q + ++ + + +E + ++ Q+ ++ +AA S Sbjct: 151 LCSLLHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSP 210 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 + + F TG KEY R+ A +L+ SV VA F D +F F+ Sbjct: 211 TYFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRL 270 Query: 275 FGYAPSAVLK 284 G +P K Sbjct: 271 TGVSPREYRK 280 >UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FM47_DESAA Length = 277 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 98/242 (40%), Gaps = 14/242 (5%) Query: 58 IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPT 117 + + + ++G +++ + G + + + + P + H+ E + + P Sbjct: 36 VHDGFSIGIVLEGK-RVIDQKGASVVIGPKDVFLINPGEPHACKSEDGKHTYFTICVEPE 94 Query: 118 SMMDIPV-----GQQSVIYN-----GEIYNQELTEVAELITSPEAI--KNNLAVAFLTKI 165 ++ Q++ ++ E N + E L+ + K ++ L+ Sbjct: 95 ALKSFASQISEKAQETPYFSCLAAKDEELNSLIREFMTLVQKSGSTMEKEASLISILSTA 154 Query: 166 IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225 I ++ + P + + + + + ++ ++A S + +RLFL Sbjct: 155 ILRYGDNPPEIRRISPHVQAVNRAREYIKTHYAENLTLKELAGVACLSPFYFQRLFLENV 214 Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 G +P ++ + R+ A +L Q G+S+ + A + F D HF++AFK G +P ++N Sbjct: 215 GISPHDFLIQYRIKKAREMLDQ-GSSLADAALDVGFTDQSHFTRAFKRVTGISPGRYIRN 273 Query: 286 TD 287 Sbjct: 274 LQ 275 >UniRef50_C6D174 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D174_PAESJ Length = 281 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 89/265 (33%), Gaps = 11/265 (4%) Query: 31 ISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCII 90 I + + + + V + + + + G G + N L Sbjct: 19 PDFIGGYSEFPE--HAVNREFATTENNLDRYYNLHIVLGGKGYLHTDN-MTYELTQGQGF 75 Query: 91 FLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQ---QSVIYNGEIY---NQELTEV 143 P +YH + W W+ F + G+ + +++ + + Sbjct: 76 LYGPGLRQTYHSDARDPWSIRWVHFYGARPEEFLDGKGLDEPWLFHLPDLAPVEALMERL 135 Query: 144 AELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWS 202 EL S E A + L +++ + Q +I + A+ Q ++ Sbjct: 136 LELGRSYEVDDEYAAASTLYELLTRIQTTASQLNVSVHQTADKIRAAANYVRANCNQPFT 195 Query: 203 VADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFF 262 + AA S + R F + GK+ ++ +AR+ A LL SV +A F Sbjct: 196 LEQAAAIAGYSSHYFSRKFNQTFGKSFSDFLTEARILRAKQLLASTRLSVKLIALETGFS 255 Query: 263 DSFHFSKAFKHKFGYAPSAVLKNTD 287 + +FSK F+ + G P + Sbjct: 256 QTSYFSKCFRDQEGMTPLQFRERHQ 280 >UniRef50_D2Q7T6 AraC-type transcriptional regulator n=2 Tax=Bifidobacterium dentium RepID=D2Q7T6_9BIFI Length = 292 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 90/293 (30%), Gaps = 17/293 (5%) Query: 10 VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69 +++ Y +P + + ++A P P + + + + Sbjct: 1 MEHAQVYTLPSFCPFTSGHTDPPSSANGVSFAFCGISRTEPGHDVGPALRDHTIIHLVLS 60 Query: 70 GCGKILLKNGEQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFTPTSMMDIPVGQQS 128 G G++ + G L + ++P +Y C W W+ G Sbjct: 61 GSGELHSQ-GAVFRLKAHDGFIIRPDSPVTYQACATDPWTYLWLGLGGNGAQRCLAGIGL 119 Query: 129 VIYNGEIYNQELTEVAELITSP----------EAIKNNLAVAFLTKIIYQWICLMYADGK 178 + + + LI S E N + + FL ++ A + Sbjct: 120 AHDRNAFHVGDTSAFLALIQSCFDYTSGSFADEIKLNAITLEFLHRLALAMATAGGATTQ 179 Query: 179 KDPQRRQIEKLI-----ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233 P + + + +V +A + + L R F TG T K+Y Sbjct: 180 SRPDDAGAGGALATAAAQYVAEHYAESINVGRVAEALHTDRSHLSRRFKSATGLTLKDYI 239 Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 + R+ A LL V +VA F FS+ FK +P+ T Sbjct: 240 DNIRIAKACDLLSMTDMEVAQVARACGFSSLEVFSRKFKMARSVSPARFRSGT 292 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 103/250 (41%), Gaps = 22/250 (8%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH--SYHCEGLVWEQ---YWME 113 + + VY G IL+ + + ++ + P +IH SY V +Q Sbjct: 28 HDCYELVYLFSGECNILVSH-TIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQRTALRFS 86 Query: 114 FTPTSMMDIPVGQQSV--------IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI 165 T + +G+ V I + + + + + + + L++ + + Sbjct: 87 IKDTDWLCSALGKDFVKDNLTAGIIEVPDKRKEYIENLITRMIYENQMPDELSMGMVKTL 146 Query: 166 IYQWI-----CLMYAD---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 +++ C +Y D + D Q I+ + ++ + ++ + D+A S ++L Sbjct: 147 FQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATYVYNNYDKQIYLDDVAKQFSISRSYL 206 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 + F + TG KEY L+ R+ A LL + +S+ ++A F DS +F AF+ G Sbjct: 207 SKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGFNDSNYFGDAFRRIKGI 266 Query: 278 APSAVLKNTD 287 +P+ N D Sbjct: 267 SPNKYRHNRD 276 >UniRef50_P07642 Arabinose operon regulatory protein n=160 Tax=Proteobacteria RepID=ARAC_ERWCH Length = 310 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 90/246 (36%), Gaps = 13/246 (5%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH--CEGLVWEQYWM 112 +P ++ T++G G+I E + ++ P H Y W W+ Sbjct: 43 RPDGMKGYIINLTMKGQGQI-FDGDETFFCNPGDLLLFPPKSTHFYGRSPSSDCWYHRWV 101 Query: 113 EFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN---LAVAFLTKI 165 F P ++ + NQ L E L + E + + + + Sbjct: 102 YFRPRAYWADWLEWHTKSSGIGRMSLPNNQLLLEFDRLFANIEQTQRSGRRFSEELGMNL 161 Query: 166 IYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFL 222 + + + + + PQ ++ + + ++L + ++A + S + L LF Sbjct: 162 LERLLLRAMEEDPQSPQKIMDPRVIEACQFITSNLAGELRIDEVARHVCLSPSRLAHLFR 221 Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282 G + D R+ A LL+ S+ + + + D +FS+ F+ + G +PS Sbjct: 222 EQVGINILRWREDQRVIRAKLLLQTTQESIANIGRVVGYDDQLYFSRVFRKRVGVSPSDF 281 Query: 283 LKNTDQ 288 + + + Sbjct: 282 RRRSSE 287 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 92/259 (35%), Gaps = 26/259 (10%) Query: 37 WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD 96 WH+ HY + +G G ++ G+QI + N +I + P Sbjct: 32 WHSMEHSHYFS---------------ELFFVTKGTGYFQIE-GKQIPVQKNDLILINPNI 75 Query: 97 IHS-YHCEGLVWEQYWMEFTPTSM------MDIPVGQQSVIYNGEIYNQELTEVAELITS 149 H+ + + WE + S+ L+ + + I + Sbjct: 76 PHTEFGNKEQPWEYIALGIEGVQFQYSEKEAPYSYSVFSLSREHREIPWYLSTLVKEIQT 135 Query: 150 PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEK---LIATLHASLQQRWSVADM 206 + + L I+ + P+++ + + ++ + ++ + Sbjct: 136 QQEGYQTICQNLLELILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTL 195 Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266 +A + ++ +L F Y G +P Y + R++ A LL+ SV ++ + F + Sbjct: 196 SALVHINKYYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSY 255 Query: 267 FSKAFKHKFGYAPSAVLKN 285 FS+ F+ G P+A K Sbjct: 256 FSQTFRRLTGTTPNAYRKK 274 >UniRef50_Q6PU53 BgaR n=2 Tax=Bacillus megaterium RepID=Q6PU53_BACME Length = 275 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 89/233 (38%), Gaps = 10/233 (4%) Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120 + + ++G G++ + N E + N +FL H Y+ W+ W+ F + M Sbjct: 40 DYQWIQCIKGRGELHV-NDEVYIIKENEGMFLTRHVPHEYYPVTSEWQVCWVSFNGSVMD 98 Query: 121 DIPVGQQS------VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI--CL 172 DI + Q V+ N E + L E+ + L +I + + Sbjct: 99 DIMLSLQFINSGKIVLTNAESLYRMLQELMNRLEENHTFSTMQCSELLYSVILKLRQDSV 158 Query: 173 MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232 + Q Q+ ++ + Q ++ +A + +E + LF + G P EY Sbjct: 159 YIESKSRLQQITQLNPVLRYIEEYYHQPLTLEVLAQQLSVTEQYTCLLFQQSLGIRPFEY 218 Query: 233 YLDARLDLALS-LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 R+ A LLK SV +VA + + +F K FK + P+ K Sbjct: 219 VTRVRIQKAKKLLLKNNQISVQDVARQVGYEHPSYFIKRFKEQENVTPTIFRK 271 >UniRef50_D1NAQ6 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAQ6_9BACT Length = 246 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 52/233 (22%), Positives = 89/233 (38%), Gaps = 3/233 (1%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTP 116 + +Y G ++ NGE++ L L P CE V Q ++ F Sbjct: 17 RLTGHHWRLYVHDAPGAGVVVNGEKLELSPGFAWLLPPHGDLPAWCENPVLNQLYLHFEV 76 Query: 117 TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + S + + E+ E + S A A + + + + Sbjct: 77 ARLTGSRRTPASAVPLDPVLTVLARELKEQLDSQAPALILTATALAAAALARLPGDAWDE 136 Query: 177 GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDA 236 D R+IE+L +L +L Q +V D+A + R F TG TP +Y + Sbjct: 137 LGPD---REIEELCESLRHTLAQELTVTDLARRLGMPVNAFIRRFQAGTGSTPYQYLTNL 193 Query: 237 RLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 R A LL++ S+ ++ + + D FHFS+ FK G +P+A + Sbjct: 194 RYTRAARLLEEGELSIDDICEAVGVKDRFHFSRMFKRLHGLSPAAYRRGYRPR 246 >UniRef50_A4BF96 Arabinose operon regulatory protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BF96_9GAMM Length = 287 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 95/249 (38%), Gaps = 17/249 (6%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWM 112 +P ++ TV G G + ++ T+ ++ L +H Y H + W W+ Sbjct: 40 RPNGLKGYIINMTVSGAGLVFPGTDQERTVAKGDMMILPASAVHDYGRHPDYHNWYHRWI 99 Query: 113 EFTPTSMMD--------------IPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158 F P + + + +Q + + V E + ++I + Sbjct: 100 YFRPRATWHDWLDWTDKHMNVGFLSLSKQPSDVEANVIDGLFQNV-EQNSKRQSILSEEL 158 Query: 159 VAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218 L + I + +P +I + +H ++ ++ ++A S++ Sbjct: 159 SLNLLEQILIRCRELDHSKPMEPIDARILRACQFIHDNIASELTIDELAQVACMSQSRFS 218 Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278 LF + + +++ D R+ LA LL ++ +VA L + D+ +FS+ FK G + Sbjct: 219 HLFKQQKNVSVRQWIEDQRIALARQLLITTDLAINQVAQYLGYQDALYFSRVFKKNLGES 278 Query: 279 PSAVLKNTD 287 P ++ Sbjct: 279 PREFRQSQR 287 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 95/242 (39%), Gaps = 18/242 (7%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWMEFTPT 117 + Y QG + ++++ Q L + I P HS+ + + + + F P Sbjct: 33 HEFFEIYYLEQGRRQHIIEDS-QYILQPDEFIIFPPFVMHHSFEENDVPFRRLLLYFNPE 91 Query: 118 SM----------MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167 + V + + IYN + ++ + + L + + Sbjct: 92 VIRSPQILRTLSERARVYKLPRAQSAPIYN-LMKDILQEQERDDLYSRELITLMVNALAL 150 Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 Q + + + QR ++ +I LH + ++ +A S+ L R F RYT Sbjct: 151 QLVR-NSDEAARPEQRNRVTDIINYLHEHFTEDITLEQLANHFYVSQYHLCREFKRYTSS 209 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS----AVL 283 T +Y + R+ A LL++ S+ E++ + F + HF++ +K G +PS A L Sbjct: 210 TIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMSPSQNKQAYL 269 Query: 284 KN 285 K Sbjct: 270 KR 271 >UniRef50_C6CRB9 Transcriptional regulator, AraC family n=3 Tax=Bacillales RepID=C6CRB9_PAESJ Length = 279 Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 95/254 (37%), Gaps = 13/254 (5%) Query: 43 EHYRVIW-PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSY 100 +YR ++ N++ Y V G G + +G L I P+ Y Sbjct: 23 GNYRFDPEHSTTREAGALNNFNIHYCVSGKGYAEI-DGVVHELRAGEAILYFPLQKQRYY 81 Query: 101 HCEGLVWEQYWMEF-TPTSMMDIPVGQQSV------IYNGEIYNQELTEVAELITSPEAI 153 + W+ W F T + D + Q + +I+ Q E+ + + Sbjct: 82 SSQDEPWDVRWFHFYGGTGLRDYLIEQGFHKSPLWKLRQPQIWEQAHEELLREAETHRIL 141 Query: 154 KNNLAVAFLTKIIYQWICLMYA--DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211 + ++ ++ A K +I +L+ + + + + + A + Sbjct: 142 RPAQLSMLTYMLLTVFVEHASALQGNKTGTSSERIMELLPLMQQEAVKPFILEEWAERVG 201 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALS-LLKQQGNSVGEVADTLNFFDSFHFSKA 270 S + +LF T TP ++ RL A LL+++ +++G++A+ + +F+K Sbjct: 202 VSPYYFCKLFRNATRMTPMDFITRCRLQAAKQWLLERKDDNIGQIAEEAGYPSVSYFNKR 261 Query: 271 FKHKFGYAPSAVLK 284 F G P+A + Sbjct: 262 FMEHEGMTPTAYRR 275 >UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3X5_9BACT Length = 286 Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 10/251 (3%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 +W K+ W YT+ G G++ E G+ ++ + P + Y E Sbjct: 38 SRSYVWDGLKRGQAELVIWQ--YTLSGMGRLRFGENEYPIPPGSAVLLVVPENHCYYLPE 95 Query: 104 GLV-WEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEA--IKNN 156 W ++ + ++ D ++ +G + + EL+ + N Sbjct: 96 DSPYWRFLFVSVYGSELVRLVTDFRRSHGFLLQHGTD-SPVVASAWELLKKCREKKLDNR 154 Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216 + + A Q ++++ A A+L + SV D+A CS Sbjct: 155 YRASAAAYDFVMSLFSEPAGRGTHAQDDFLKRVHAYALANLSRPLSVGDLADAAGCSRWH 214 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 R F + GK+P E+ D ++ LA+ LL+ SV EVA+ F D+ +F K F++ +G Sbjct: 215 FSRRFQQLEGKSPHEFVTDLKMRLAVRLLQTTNGSVKEVAENCGFEDASYFCKVFRNHYG 274 Query: 277 YAPSAVLKNTD 287 +P+ + Sbjct: 275 VSPAGFRSGAE 285 >UniRef50_D1WXI3 Transcriptional regulator, AraC family n=5 Tax=Streptomyces RepID=D1WXI3_9ACTO Length = 292 Score = 157 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 88/240 (36%), Gaps = 8/240 (3%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWME 113 P + VAV G G +G + + G +I+L P H Y + G W++ +++ Sbjct: 36 GPRTLDHHVAVIVNSGTGWFKGPDGRRTPVTGPSLIWLTPGTPHHYGADPGTGWDESFVD 95 Query: 114 FTPTSMMDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169 FT + + + V ++ + L V + Sbjct: 96 FTGPATTTYTELGYIEPDRPLVPLSDTAAPRAAVGRIVRAARRGNPLLEVETGAAVHELL 155 Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229 + L A P + + +A Q +VA+ AA + A LR R G +P Sbjct: 156 VSLRRARADIGPDGDPVLQALA---RDAYQPLTVAEHAARHGMTPAELRTAVRRGAGCSP 212 Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 K+Y L RL A LL V VA + + D +FS+ F + G AP + + Sbjct: 213 KDYLLGIRLGRAKELLAATDLPVAAVARRVGYDDPAYFSRLFARRVGTAPVRFREQQGRS 272 >UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQC9_CLOCL Length = 275 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 91/233 (39%), Gaps = 10/233 (4%) Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120 + + +G G + + N + IT++ N + L P H Y+ W W+ ++ Sbjct: 40 HFQWIQCRKGSGMLKINN-QTITINENQAMLLFPHTSHEYYSSSEEWIVDWVALNGYAVE 98 Query: 121 DIP------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY 174 +I + + E++ + ++ EL S IK+ + + I+ + Sbjct: 99 EILKNGGIQHSEVFSVSEPELFILRMEKLLELAASYNTIKSLESSKIIYSILMDILAYTS 158 Query: 175 ADGKKD--PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232 D Q ++ ++ + + + ++ D++ + +L +F + TG EY Sbjct: 159 TDKVDYMINQYSKLRPVLDYIDDNYDKIITLQDLSEVANVTPEYLCTVFKKTTGIRVFEY 218 Query: 233 YLDARLDLALSL-LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 + R+ + + L ++ + E+A F D +F FK P+ K Sbjct: 219 INNIRIKNSKEMILSKKNMPIKEIAKNSGFEDVSYFCSMFKKIEKLTPNEFRK 271 >UniRef50_A3YE82 Transcriptional Regulator, AraC family protein n=2 Tax=Gammaproteobacteria RepID=A3YE82_9GAMM Length = 277 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 18/236 (7%) Query: 71 CGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM---------- 120 G++ +K Q+ L N + + P H+ G + +WM F P+ + Sbjct: 35 KGRLSMKYQNQVELSENMLTLIPPGVAHTLVA-GEDLDIWWMGFCPSCLTLDFDASLLQT 93 Query: 121 --DIPVGQQSVIYNGE----IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI-CLM 173 I +G V + N+ E+ +L S E + + +T I+++ Sbjct: 94 FRQIRLGALPVFKVSQDRALFINRMFEELDQLHASNETDIEVIQKSIITLILHEVNKASQ 153 Query: 174 YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233 + + ++ K + + S+ D+A I CS + L L ++TG T ++ Sbjct: 154 PFEIGANQADIKVSKALDFIQQHYLTPISLKDVANAIHCSPSHLAYLVKQHTGYTVGQWI 213 Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 L++RL A S L + + + L + D HF + FK +G P+A K H Sbjct: 214 LNSRLTQACSRLIHSDQDINHLVEELGWHDVTHFIRQFKKAYGITPAAWRKQQKNH 269 >UniRef50_C5C2R6 Transcriptional regulator, AraC family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C2R6_BEUC1 Length = 275 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 80/232 (34%), Gaps = 9/232 (3%) Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMD 121 V G G+ + + +L P H+Y W ++W+ F + Sbjct: 42 HALVVVTSGRGRYR-DVERDVDVVAPAWFWLFPGRWHAYGPGPDGWSEHWVLFDGVAARG 100 Query: 122 IPVGQ--QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179 ++ G + +EL E + + A ++++ + + Sbjct: 101 YAAHTAWDPPVHAGGLPAEELAACFEGLRAATAGAGLRDQLVAASLVHRLVGATVSARAA 160 Query: 180 --DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 +P ++ +I + SVA AA S LR TG TP E L R Sbjct: 161 AGEPTTSAVQAVIDA----AAEPLSVAQRAARAGVSPDRLRAEVRAETGLTPHELVLRTR 216 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 L A LL VG VA + + D +FS+ F + G PS + + Sbjct: 217 LATAQQLLAGSDLDVGAVAARVGYDDPAYFSRLFARRVGAPPSEFRRQQHRS 268 >UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AG99_BACPU Length = 302 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 89/222 (40%), Gaps = 5/222 (2%) Query: 64 AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY---WMEFTPTSMM 120 + +++G ++ + NG+ L ++ + P + +Y + Sbjct: 80 FLLSIRGEARLNI-NGKSYDLQPGSVMHVTPGCQLALQVISQSEYEYHSLFYHLNCDKES 138 Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180 D + + LT + + + +P + +I+YQ + + + Sbjct: 139 DCDTAFKLETGANPRIIELLTMLHQNVHAPGGMGKLRVKELFLRILYQML-MGCKQKESS 197 Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 P R IE+ +A + ++ D+A + F +YTG P +Y + R++ Sbjct: 198 PNERIIEEAVAYIRGQYMNPLTLQDLAELCDMNPKSFSYFFHKYTGLHPIDYVIQYRMER 257 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282 A +LK + +V+ T+ + + +FS+ FK KFG PSA Sbjct: 258 AREILKAGNIPIRDVSMTVGYPNPLYFSRLFKKKFGVPPSAY 299 >UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HZP2_LYSSC Length = 276 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 5/216 (2%) Query: 74 ILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFT--PTSMMDIPVGQQSVI 130 I NG + I+ P + VWE + + P+ +Q + Sbjct: 52 IFSLNGTPYVMEPGVIVHAGPQMPIEVNVTSQKVWEYAVVHYNLPMEETALYPLVEQHFL 111 Query: 131 YNGEIYNQELTEVAELITSPEAIKNN--LAVAFLTKIIYQWICLMYADGKKDPQRRQIEK 188 Q +T+V +L+ S N L + + I + D +E+ Sbjct: 112 IKTGHNTQIITQVQQLVESYSFPGNMAVFKSKTLFMNLLEHILIAAKVKVLDNANELMEQ 171 Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 + +H ++ SV+++++ LF ++TG P +Y + R+ A LL+ Sbjct: 172 ALQYIHEHYAEQISVSNISSEFDIERRRFAYLFEQHTGMNPSKYITEYRIRRAKDLLEYG 231 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 G V E+A+ + + D F+FS+ FK G +PSA K Sbjct: 232 GIPVAEIAECVGYVDCFYFSRVFKKCTGLSPSAYRK 267 >UniRef50_C6IZN2 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN2_9BACL Length = 277 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 95/241 (39%), Gaps = 13/241 (5%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWME 113 +P + ++T +G G++ L +G + L + L P H Y + WE Y++ Sbjct: 37 RPDGYPYYHWLHTAEGEGELTLGSGT-VLLPPGSGMLLPPGMPHEYQAKRSSTWETYYLT 95 Query: 114 FTPTSMMDIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI 170 F + I +++V++ E + L+ ++I++ + T+ +Y+++ Sbjct: 96 FGGAAAGSILAAFGIREAVLFRWEAEAPISPLLGHLLNRLDSIQDPFGLETSTE-VYRFL 154 Query: 171 CLMYADGKKDPQR-----RQIEKLIATLHASLQQR-WSVADMAATIPCSEAWLRRLFLRY 224 ++ G+ ++ L+A + + +A S L +LF + Sbjct: 155 AVLSQFGQVSGSAVPRIMEKLGPLLAWMEREYGNPDVGLDTLAEVAGMSGRHLSKLFQQS 214 Query: 225 TGKTPKEYYLDARLDLALSLLK-QQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 G P Y R+ A L + G +V +A F D+ HF F+ G P Sbjct: 215 FGIAPYSYLTQMRIHKAKEHLASEPGVTVAAIAGKTGFRDASHFVATFRKHTGMTPQQFR 274 Query: 284 K 284 + Sbjct: 275 R 275 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 94/241 (39%), Gaps = 12/241 (4%) Query: 54 KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWM 112 K + + Y +G + + +H + P HSY E + +++ + Sbjct: 21 SKSHYHDYFELYYLEEGE-RFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRLLV 79 Query: 113 EFTPTSMMDIPVGQ---------QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163 F+ + + + + + ++ ++ L ++ + P+A + + L Sbjct: 80 YFSKEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHED-YIHTLL 138 Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 + I K +R +I +I+ +H + Q+ S+ +A S +L R F R Sbjct: 139 NMALLTIARNIQTPVKPEKRNRITDVISYIHQNYQEDISIDQLAQMSYVSPYYLCREFKR 198 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 YT T +Y R+ A + + ++ E++ F + HF++ FK G PS Sbjct: 199 YTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMTPSNFR 258 Query: 284 K 284 K Sbjct: 259 K 259 >UniRef50_UPI0001788A2C transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A2C Length = 284 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 95/272 (34%), Gaps = 18/272 (6%) Query: 28 SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGN 87 + G + P + P + + +G ++ +G+++ L N Sbjct: 15 TPGYLDKEAQIWPVRAGRSLAKPNYRVGPKRIECYSLHFVHEGTVRLEF-DGKRVDLQKN 73 Query: 88 CIIFLKPMDIHSYH--CEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAE 145 + L P + YH W+ + + + + ++ Q ++ E Sbjct: 74 DLFCLFPGRTYYYHLLPSDAPLRMSWLALDGSRVRPL-LELAGLVPESPFGRQMISSRVE 132 Query: 146 LITSPEAIKNNLA---------VAFLTKIIYQWICLMYADGKKDPQRR---QIEKLIATL 193 S E + + LA L ++Y + M D I + + + Sbjct: 133 --KSAECVIDALAGVERWKPSVSLELHGLVYGLLAGMVPDAASAEPTELAGWINECLDYM 190 Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253 + SV +A ++ +F G P +Y R+D A LL + ++ Sbjct: 191 ELHATEGISVQQVAEFAGVHRSYFSNMFTSQVGMPPLKYLQRIRMDKAKRLLTETDATIT 250 Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 E+A +L + + + F++AFK F P + +N Sbjct: 251 EIALSLGYPNLYSFTRAFKIYFKVPPITMREN 282 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 63/174 (36%), Gaps = 7/174 (4%) Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 + V ++ I + L A ++ E + L I Sbjct: 347 GRKAEETFVWLGRLLSELGIRYERLASFASCRSAAELKRAALDE-------LDRIAADLE 399 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 ++ ++ K + + ++ ++A S + +LF + G T +Y + Sbjct: 400 VWRQQQAYGKLGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTN 459 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 R++ A L + S+ E+ ++ + D +FS+ FK + G +PS K Sbjct: 460 VRIERAKEALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQAR 513 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 96/278 (34%), Gaps = 33/278 (11%) Query: 40 YADEHYRVIWPRDKKKPLIANSWV----AVYTVQGCGKILLKNGEQITLHGNCIIFLKPM 95 Y Y + P D PL+ W + +G + + L IF+ Sbjct: 17 YPVSLYEITCPSDA--PLLDLHWHDELELLLVTEGTAVFRVDLQD-YELQAGEAIFVNSG 73 Query: 96 DIHS-YHCEGLVWEQYWMEFTPTSM--------------------MDIPVGQQSVIYNGE 134 ++HS Y G + F + ++P + G Sbjct: 74 ELHSGYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGM 133 Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR-----QIEKL 189 L ++ E+ + +A L I+ + + L + P++ +++ + Sbjct: 134 ELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTV 193 Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249 I + + + + +A SE++ R F R T K+P EY R+ A S L+Q Sbjct: 194 IEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTD 253 Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 + EVA + F +F+ F+ +FG P Sbjct: 254 AKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KE68_BACHD Length = 278 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 89/233 (38%), Gaps = 6/233 (2%) Query: 64 AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIP 123 ++ ++G + NG L ++ +E + +T + + P Sbjct: 46 FLFALKGEASFVF-NGTAYHLSPGKVVHGGKNMELIVKVGPAAFEYCLIHYTLHTRSNHP 104 Query: 124 VGQQSVIYNGE----IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179 S ++L + + ++P A A I + + + Sbjct: 105 NDTDSHFLLEPGENLAITEKLDLLHRIKSTPGNFPEIQAKALFYTIFHDMLICARNRLNR 164 Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239 + Q IE+++ +H + +V +A LF +Y G P +Y + RL Sbjct: 165 ESQL-VIEQVVEYIHHHYMEPMTVKKLADMSGMGVKPFSYLFKKYIGMFPIDYLIQYRLK 223 Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292 A +LL +S+ ++A+++ + D+ +FS+ FK G +P+A P+D Sbjct: 224 RAKNLLVSSNSSIADIAESIGYLDALYFSRLFKKHIGCSPTAFRAQMGNCPSD 276 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 97/278 (34%), Gaps = 26/278 (9%) Query: 35 SLWHTYADEHYRVIWPRD-KKKPLI-ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFL 92 + Y P D ++ P+ + +G G + + E + + Sbjct: 60 HAGRDFPFNIYPCSIPADFRQVPVHWHEDMEIIAVKKGRGVVTVDM-EPYEARAGEAVVV 118 Query: 93 KPMDIHSY-HCEGLVWEQYWMEFTPT----------------SMMDIPVGQQSVIYNGEI 135 P +H C E + F P+ M + +G+ I G Sbjct: 119 FPGQLHGISQCGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLP 178 Query: 136 YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY------ADGKKDPQRRQIEKL 189 E ++ KN + ++ ++ L+ A G+ R ++++L Sbjct: 179 DYGAFMECIGILDQLCGKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKSRERMKRL 238 Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249 + + ++ +V D A S + + F +Y G +Y + RL+ A +L Sbjct: 239 LEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTP 298 Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 + V VA F + +F++ F+ K+G P KN + Sbjct: 299 DPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKNGE 336 >UniRef50_C6J5K7 Transcriptional regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5K7_9BACL Length = 219 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 80/216 (37%), Gaps = 9/216 (4%) Query: 80 EQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFTPTS--MMDIPVGQQS------VI 130 E+ + I+ P H Y+ EG +WE W F P + +P+GQ + + Sbjct: 4 EKFSCTEGEIVLFPPGIPHHYYTSEGSLWEFVWAHFIPEVRWLDLLPIGQDNNGPITLQL 63 Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLI 190 + + + L+ + L + I L +I + Sbjct: 64 GKSAAFERMVLAFERLVREKRHTDRYAELLSLNALEEALIHLAQFAAVSVSLDPRIADTL 123 Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250 + L ++A++A + S + LF TG + E L RL A LLK Sbjct: 124 IYITDHLDAPHTIAELARRVSLSPSRFSHLFKGQTGDSVMETLLKLRLKHAARLLKHTTL 183 Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 V E+A F F+F+K F +G +P+ + T Sbjct: 184 LVSEIAGLAGFQSPFYFTKQFTAFYGMSPTDYRRKT 219 >UniRef50_A6DJ96 Arabinose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJ96_9BACT Length = 280 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 97/280 (34%), Gaps = 24/280 (8%) Query: 22 INENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQ 81 + NV + I++ H + Y + W + +G G G+ Sbjct: 1 MRHNVAPPPLRDITVGHFSLHKAYTCYREEGTQ------DWQLLIHHKGKGVFHHLQGDL 54 Query: 82 ITLHGNCIIFLKPMDIHSYHC---EGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQ 138 C+ L P H Y + W YW F P + Q S + +G Y + Sbjct: 55 FMDDLECV-LLPPRVAHDYGIPEGDDGFWAAYWAHFIPRPHW-LSFLQWSEVRDGLFYFK 112 Query: 139 ------------ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQI 186 + E EL A LA+ L +I+ I + D + ++I Sbjct: 113 IPDQKLYKKIIVLIQEAIELAKEEVAFSEQLAMNRLEEILIH-IARVQQDLEHSGLDQRI 171 Query: 187 EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLK 246 + + + + +++ ++A SEA RLF + GK+P Y R+ A L Sbjct: 172 VSAVRYIQGNYSRSINLSILSARASLSEAAFCRLFKKEMGKSPISYLEHIRITHACHFLS 231 Query: 247 QQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 +S+ ++ L F HF FK P +N Sbjct: 232 MTTHSIKDITFMLGFSSKSHFCARFKKFNHMTPLEYRRNA 271 >UniRef50_C0ZJ95 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJ95_BREBN Length = 530 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 82/233 (35%), Gaps = 10/233 (4%) Query: 60 NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEF----- 114 + + G G + +++ C P C G V + Y + F Sbjct: 36 EDYTMIVATDGEGLLEIESSTYRFTRERC-WIAAPRQNVRISCTGHVLDYYSLTFRVVHT 94 Query: 115 ----TPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI 170 + ++ + + E+ + + EA++ +++ Sbjct: 95 EAPTKEQACEAFFCLEELTCTPFSRVVELIAEIYKHREATEALQRFYNHVRFEELLCVLA 154 Query: 171 CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 + RR +E+ IA + Q+ +V +A +LF TG+ P Sbjct: 155 QQNVPGKTRLDPRRAVERSIAYVEKHYQEPLTVDQLAHEANVPRWRYTQLFKEMTGEIPL 214 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 +Y R++ A LL G+ + E+A + F ++FS+ FK + G AP Sbjct: 215 DYMNQLRINRAKQLLLMTGDRINEIAQNVGFNSEYYFSRRFKQRVGLAPGKYR 267 >UniRef50_B4D0H6 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0H6_9BACT Length = 282 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 13/221 (5%) Query: 68 VQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQ 126 V+G G+ILL +G L + P ++++H G W W+ + VG Sbjct: 67 VEGEGRILL-DGRWQRLRAGELSMAPPRGLNAFHAVPGRRWVIAWVRCEEPPWIRPLVGA 125 Query: 127 QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ---- 182 S + + + L E ++ ++++ WI L++ ++ Q Sbjct: 126 GSPVRLRAGKGEMSRVIGGLRNEWEGARDP-------RMVHHWIGLLHGLLQRFAQPWRG 178 Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242 + ++ +L + + W+++ +AA + S LRRL LR G+TP + R+ A Sbjct: 179 QERLWRLWEEVGREPAKPWTLSMLAARVHMSSEHLRRLCLRELGRTPVQQLTYLRIQRAK 238 Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 LL+ + + +A + + + FS+AFK G PS Sbjct: 239 DLLENSDDKLEAIAPAVGYVSALVFSRAFKRWVGCTPSEYR 279 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 25/253 (9%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYW-----ME 113 + +Y G G + L N E + + +I + +H + + + Sbjct: 32 HDEMELIYIESGSGLVRL-NKEILRVKAGDLIIVNRGVLHGIKTDLKNILYFRSIVFDLN 90 Query: 114 FTPTSMMDIPVGQ------------QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161 F D+ + +I + + + + I S K Sbjct: 91 FLSGPAGDLCQERVISLLMDNQAEFTHIISRSDDNYGNICLLFDRIHSCHKEKKPYYFVK 150 Query: 162 LTKIIYQWICLM-------YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 L + + + M AD ++ I+K++ ++ + Q + A++ A SE Sbjct: 151 LKALFFSFFYEMLMGNYITPADKDENKSLASIKKILDYINLNYSQPLTAAELTALSNYSE 210 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 + +LF +YTGKT Y D R++ A +L +SV E+A + F ++ +F K F+ Sbjct: 211 YYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSDSSVTEIALEVGFNNTSYFIKKFQQA 270 Query: 275 FGYAPSAVLKNTD 287 G +P +N Sbjct: 271 TGMSPHKFRRNLS 283 >UniRef50_D1N1W3 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1W3_9BACT Length = 254 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 86/236 (36%), Gaps = 6/236 (2%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFT 115 P +Y + G ++ G ++ + P IH+ + + + F Sbjct: 25 PHQHGGCELIYVLDGHCRVESPAG-IFEGTPGKLLVIPPEVIHN-QIDDPGEDNIFCVFQ 82 Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 + + + + E+ ++ + A A L + + Sbjct: 83 ANPALFAQHWRSLDLGGETRTIRMFLELCDMTEKNDLTG---ASALLLSFLQRLSAFEQK 139 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 Q ++ K + LH +L + +V A S + LR+LF Y G P Y + Sbjct: 140 QSLSTRQHPKLRKALEFLHENLTRPITVRATAEHAGISVSLLRKLFTDYCGTPPLGYLQN 199 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPT 291 RL A LLK S+ E+A F + +F + ++ K G +P + +D HP+ Sbjct: 200 LRLARAEELLKNPYLSIAEIAAECGFDSAGYFIRLYRRKHGTSPGKARRRSD-HPS 254 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 103/251 (41%), Gaps = 18/251 (7%) Query: 51 RDKKKPLIANSWVAVYTV-QGCGKILLKNGEQITLHGNCIIFLKPMDIH-SYHCEGLVWE 108 + + + ++ + + +G + + ++ P H +G Sbjct: 23 SESHGEMHHHDFLEISVLLEGESTYYFEKEPAKKIRAGSVMLFNPGVDHCELQPKGTRSH 82 Query: 109 QYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV---AF 161 Q + S+ + + ++ G+ ++Q L + +L+ ++ + A Sbjct: 83 QLHIGLKNISLEGFKRNFFPNKHPLLELGKYHHQVLEKAWQLVRESSEERDEFQLMQKAV 142 Query: 162 LTKIIYQWIC---------LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 L +++ + L Y + Q++ + + L ++ ++ +A Sbjct: 143 LMEMLVYILRGLNEDHINVLPYLSKSQRRQQQIVNYTVYYLENHYKEEITLEKLAQDQFL 202 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 S +L ++F TG +P Y ++ RL A +LK + ++ EVA + + D++HFSK+FK Sbjct: 203 SPTYLSKIFKEATGVSPINYLIEIRLKRAKDMLKNENLTIKEVASAVGYQDAYHFSKSFK 262 Query: 273 HKFGYAPSAVL 283 +G +PS VL Sbjct: 263 KLYGVSPSGVL 273 >UniRef50_C6D447 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D447_PAESJ Length = 292 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 87/270 (32%), Gaps = 14/270 (5%) Query: 27 ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86 IS S+W P S+ +G ++ +TL Sbjct: 19 ISELDKQGSIW--PVRGGMTETRQGYSAGPKRIESYSLHIVKEGFVRVEWDADNGVTLSA 76 Query: 87 NCIIFLKPMDIHSYHC-EGL-VWEQYWMEFTPTSMMDI----------PVGQQSVIYNGE 134 + L P ++Y+ EG W+ ++ P + + E Sbjct: 77 GDLFCLFPARTYTYYAIEGEKPPRMSWIVMDGPRAAEMLALTGISCERPFLENAWTQEAE 136 Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLH 194 L + + A +L + L + +C +++ ++ + Sbjct: 137 RALLGLLDWMRSRETESAHVRSLDMQSLLYRLLAALCRTAPHAYALNATDWVKQSMSYIR 196 Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254 + +V A + + F G P E+ R++ A LL + S+ E Sbjct: 197 QHATEGITVQQAAKAAGMNRTYYSVAFSEKVGMPPSEFITQVRMESAKRLLAETDASITE 256 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 VA T + + F++ FK++ G P+A + Sbjct: 257 VAYTTGYSSLYAFTRTFKNRMGETPTAYRE 286 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 88/278 (31%), Gaps = 30/278 (10%) Query: 39 TYADEHYRVIWPRDKKKP--LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD 96 + D V+ RD ++P L + + + + G + + + L + Sbjct: 14 FHPDGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELVTGDTFVIGGDR 73 Query: 97 IHSYHCEGLVWEQYWMEFTPTSMM------------DIPVGQQSVIYNGEIYNQEL---- 140 H Y + F P + + + L Sbjct: 74 PHDY-LNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKRHQFTSRLQLNP 132 Query: 141 TEVAELITSPEAIKNNLAVA-----------FLTKIIYQWICLMYADGKKDPQRRQIEKL 189 E+ E + E++ L L + + C + + + +I + Sbjct: 133 AELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCYIRTRNPESKKLLRIAEA 192 Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249 I+ + + S+ D+ S R F +P +Y + R+ A LL+ Sbjct: 193 ISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQEASRLLRSTD 252 Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 S+ ++A + F DS +FS+ F+ G +P K Sbjct: 253 RSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter RepID=C9Y4M3_CROTZ Length = 289 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 15/246 (6%) Query: 58 IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH-----CEGLVWEQYWM 112 + W V G G + NG+ TL G + F++ D H Y C V + Sbjct: 43 HHDFWEIVIVEHGTGT-HVFNGQPYTLSGGSVCFVRDHDRHLYEHTENLCLTNVLYRSPQ 101 Query: 113 EFTPTSMMDIPVGQQSVIY---NGEIYNQELTEVAELITSPEAIK---NNLAVAFLTKII 166 F+ S ++ + Q+ + + + Q L + + L+ EA++ + AVA + + Sbjct: 102 AFSFLSGLEKLLPQEQDGHYPSHWRVSQQTLHQASPLVERLEALRECSDVHAVASMEMLF 161 Query: 167 YQWICLMYADGKKD---PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 Q + L+ + + ++ +LIA L + +A S L R + Sbjct: 162 MQLLILLRSGSQMQGGGHADERLNQLIAWLEDHYAEEVCWEQLADKHMLSLRTLHRQLKQ 221 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 TG TP+ Y RL A LL+ SV ++A F DS HFS F+ +F ++P + Sbjct: 222 RTGLTPQRYLNRLRLMKARYLLRHSEESVTDIAYQCGFGDSNHFSTLFRREFSWSPRDIR 281 Query: 284 KNTDQH 289 + D+ Sbjct: 282 QGRDEQ 287 >UniRef50_B4D5Y6 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5Y6_9BACT Length = 297 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 9/237 (3%) Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSM 119 + + +G G +LL G++ L + P H+ E G +Y+++F Sbjct: 60 YYAVEFVAEGEGSLLLA-GKRCRLRPGVVFAYGPRVPHTIRTEPGRPMLKYYVDFVGRRA 118 Query: 120 MDIP------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM 173 ++ G+ + + + + L A + ++ + Sbjct: 119 KELLEDGPVRPGRLAQVSTPGEIREIFESLQRNGGGESPFGPALCAALIPVLLLKIAERA 178 Query: 174 YADGKKDPQR-RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232 G DP+ ++ A + A + ++ D A + ++L RLF R+ +TP + Sbjct: 179 VPAGGADPRALATYQRARALIDARFLEFKTLDDAARAAGVNLSYLCRLFQRFDHQTPYRH 238 Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 L +++ A LL +G V E A L F D F+FS+AF+ FG AP L T + Sbjct: 239 LLHLKMNRAAQLLLDRGMLVKEAAAELGFSDPFNFSRAFRSVFGLAPEKFLARTQRR 295 >UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I993_CLOCE Length = 276 Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 110/277 (39%), Gaps = 18/277 (6%) Query: 17 NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76 I ++ E IS I + + + EHY+ R + P ++ + QG GK+++ Sbjct: 3 RIFSVLTERDISLPIFVTGVGY----EHYQDHVTRKEGFP----NYHLAFCEQGVGKLII 54 Query: 77 KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVG------QQSVI 130 N E + F P H Y+ W W+ F+ +S+ + + ++ Sbjct: 55 CNRE-YLIEQKTAFFFYPNVPHEYYPVAEPWSLRWIIFSGSSVHTLLNAAGIGRFEVYML 113 Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR--RQIEK 188 + E ++ +++ ++ A L + L+ + + +++ Sbjct: 114 NSPEEVTFCCNKLHKILLEKKSTSMLEASGVLYNFLANINKLIEEVNSEGDTQLIKKLNS 173 Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ- 247 +I + + ++ ++ ++A S ++L R+F + G +P Y L R++ A L Sbjct: 174 IIGFIKNNFKKDITLEELATHAGISSSYLCRIFKKEYGISPFTYILRCRVNAAKEELINF 233 Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 S+ ++ F +F FK GY+P+ + Sbjct: 234 PDKSIKAISLDTGFNSCSYFGSVFKEYEGYSPNRFRE 270 >UniRef50_C7NB40 Transcriptional regulator, AraC family n=2 Tax=Leptotrichia RepID=C7NB40_LEPBD Length = 291 Score = 153 bits (387), Expect = 7e-36, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 108/266 (40%), Gaps = 13/266 (4%) Query: 23 NENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82 E H+ +D+ Y W +K N + YT+ G G+I + N Sbjct: 15 FEKPFPMVFIRAIGRHSISDKSY--YWDSSTRK--DKNFCLFQYTLNGQGEIKIGNKTYS 70 Query: 83 TLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTS---MMDIPVGQQSVIYNGEIYNQ 138 P + Y + WE ++EF+ + + ++ + IY + ++ Sbjct: 71 QRKDEAFFITIPGNHAYYLPQNSNFWEVLYIEFSIEADEFVKNLTNLNNNSIYKLQKNSK 130 Query: 139 ELTEVAELITSP---EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHA 195 L + E + E + I++++ L +K+ + + K Sbjct: 131 LLNLIWEFYYASINNEITDIYKCSQYAYNILFEFSSLFVTKKEKNSELIKEIKKYIK--K 188 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 + Q+ S D++ + S++ L R F T +P +Y + RL A LL +S+ ++ Sbjct: 189 NYQKPISSEDISRYVNVSKSHLTRKFKAETNISPGQYLIQTRLTKARELLLDTDSSIEKI 248 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSA 281 +D + F + +FSKAF+HKF +P+ Sbjct: 249 SDYVGFSCANYFSKAFRHKFKISPTE 274 >UniRef50_C7MA05 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MA05_BRAFD Length = 279 Score = 153 bits (386), Expect = 8e-36, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 88/243 (36%), Gaps = 9/243 (3%) Query: 54 KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE--GLVWEQYW 111 ++ A W+ ++TV G G + +G + + L P +H Y + W + Sbjct: 37 RRSQGAADWLLLHTVAGAGILRGADGASLPVRPGQAALLAPGALHDYGTDPAAGRWRLLY 96 Query: 112 MEFTPTS-------MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164 F P + ++ G ++ E+ + + + + L Sbjct: 97 SHFHPPATWLALLGWPEVTPGIGTIRLGTEVEVRVRQALRGAARAARLAVGRPELFALNG 156 Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 I + + ++ ++ ++ + A L A++A S + L LF Sbjct: 157 IEAALLWYDTQNPRRHQLDERVLAVLEHVDAHLATDLDAAELARVAHLSPSRLSHLFTAQ 216 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 G + Y RL+LA LL+ V ++A + F D +FS+ F+ G +PS Sbjct: 217 VGTSLARYVEAQRLELAARLLEMTPEPVADIAGRVGFRDPLYFSRRFRTLRGVSPSEHRA 276 Query: 285 NTD 287 Sbjct: 277 RHR 279 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 103/278 (37%), Gaps = 27/278 (9%) Query: 32 SLISLWHTYADEHYRVIWPRDKKKPLIA--NSWVAVYTVQGCGKILLKNGEQITLHGNCI 89 + I + Y P D + + + + +G G I+ + ++ I Sbjct: 17 NKIHTPDDFPYNTYLCSIPLDFQSVNLHWHDEVEIIVIKKGSG-IVSVDLTTYSVSAGDI 75 Query: 90 IFLKPMDIHSY-HCEGLVWEQYWMEFTPTSM--------------------MDIPVGQQS 128 IF+ P +H+ + + E + F + + ++I + Sbjct: 76 IFVLPGQLHAISQKDNEIMEYENILFKSSLLKSSGYDLCNDKFIQPLFSGSLNICPVINN 135 Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK---DPQRRQ 185 + E+ L A L +I+Y + + K ++ Sbjct: 136 QTPYYPPVITAINEIDHLCDLRPYAYQLSIKAHLFQILYTLVSNCGQNKIKPINQKSLKK 195 Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 I+ +++ + + Q+ ++ D+A S+++ + F G + +Y D RL++A LL Sbjct: 196 IKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAELL 255 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 +++ ++A F + +F++ FK K+G +P Sbjct: 256 TTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQG3_DESHD Length = 273 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 76/226 (33%), Gaps = 16/226 (7%) Query: 69 QGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFT---------PTS 118 G +G+ + ++ P S G WE + + P Sbjct: 50 SGSACFTF-DGKPYVIEPGMVVHAGPGMRLSKEVIGDREWEYAVIHYHIPQHERDEYPLF 108 Query: 119 MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178 D + + Q L I S L + Q I Sbjct: 109 HKDFSLAHGRSAKVPHLVRQILD-----IQSIPGAAAKFQTKVLFLSLLQEIFTAACGQP 163 Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 + IE+ + + + +V +A LF R+TG +P Y ++ R+ Sbjct: 164 GQENSKLIEEAMGYIRLNYADELTVQKVADEFSVERRQFSYLFKRHTGMSPIHYLIECRI 223 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 A LL G SV +VA+ + + DS +FSKAFK G +PS + Sbjct: 224 SKAKELLGSPGCSVKQVAEWVGYTDSLYFSKAFKKYTGVSPSEYRE 269 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 98/250 (39%), Gaps = 12/250 (4%) Query: 51 RDKKKPLIANSW-VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWE 108 +D + + Y V G GK L +N E + ++ + P H+ +G E Sbjct: 30 KDWNSVFHTHHFTELFYVVSGEGKFLFRN-ETHHIKTGDLVIIPPYLEHTEQSVKGKSLE 88 Query: 109 QYWMEFTPTSMM--------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160 Y + S + + +I+ Q L E+ E I NL Sbjct: 89 YYVIGIDKISFLAENGQTGIQAFCNFRDQSSVSDIFAQMLYEMRNDDYGSEIICQNLLEI 148 Query: 161 FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 + +II L+ + ++ ++ L + +R ++ + + ++ ++ Sbjct: 149 LILRIIRSQ-RLIPISINSERMTKECAQIKEYLDTNYTERITLDTLTSLTHMNKYYMAHS 207 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 F +Y G +P +Y RL +A +LL+ +SV ++A + F +F+++F+ +G P Sbjct: 208 FAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQSYFTQSFRKYYGMTPL 267 Query: 281 AVLKNTDQHP 290 + + Sbjct: 268 QYRQQNAETS 277 >UniRef50_C0A9I7 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9I7_9BACT Length = 271 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 7/236 (2%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKIL-LKNGEQITLHGNCIIFLKPMDIHSYHCEGLV 106 WPR + K + + V+G + + + GE++ H I+ + P ++H+Y Sbjct: 42 CWPRRRLK-----EFELILAVRGEFEFINHETGERVEQHAGDILVIHPGELHTYRLLSSA 96 Query: 107 WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166 ++ +P+ Q + E+ N L L + Sbjct: 97 EHAFFSCIHCMMTPRVPLDQCPPRLTHWETEHAMGELFRRADDLRRT-NGLGSGKLLAGV 155 Query: 167 YQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226 + I L + + P ++ ++ L A L + S D+A + + +F G Sbjct: 156 VRLIWLYLQEPPRPPADARLTAMLDYLEAHLHKHPSRLDLAQRFRMTPQRINAIFKHELG 215 Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282 +P Y L A A +L++ SV E A L F + FHFS+ FK +G+ PS + Sbjct: 216 MSPGAYVLRALAGRAYALMRDDQLSVKETAHRLGFANPFHFSRVFKKIYGHPPSEI 271 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 97/246 (39%), Gaps = 25/246 (10%) Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH-SYHCEGLV---------WEQYWMEFT 115 Y G G ++ NG++ ++ + D+H +Y + LV W + + F Sbjct: 48 YIKSGMGYYII-NGQKFEFQQGDVLLINSNDLHCAYETKDLVMTVISFDSTWFIHNLRFD 106 Query: 116 P---TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI-- 170 P + ++ ++I +L + + + + ++ Q++ Sbjct: 107 PELFSPFREMGKHYMNLIPRDHPAMGKLRSLLFELQEEHVGEQRSYATVVYSLLLQFLAT 166 Query: 171 ----CLMYADGKKDP-----QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 C + +G +P Q ++ ++I + + W++ ++A+ + S + +F Sbjct: 167 VNRQCRIEGEGGSEPSISERQLEKMRQVIMVMEQNFAHPWTLEELASLVYLSPSRFSEIF 226 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 R G P Y + RL+ A+++L+ V +VA F +F++ FK G P A Sbjct: 227 KRAVGMPPLLYLIHIRLEQAVTMLEGGHMKVMDVALECGFRTLTNFNRLFKKHIGMTPKA 286 Query: 282 VLKNTD 287 K Sbjct: 287 SQKQHS 292 >UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N277_9BACT Length = 315 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 95/264 (35%), Gaps = 21/264 (7%) Query: 44 HYRVIWPRDKK--KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101 H+ W ++ + N + ++G G L + +++ L + L P + H+Y Sbjct: 35 HFMNDWEKELSHTQYHKHNFYELAVVLRGAGT-HLTDSQKLPLRPGSVFLLHPGESHAYE 93 Query: 102 CEG--------------LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELI 147 + + ++ P ++ + EL + + Sbjct: 94 YSEPLTLMNFMFDSQILRPYRKSLSGLAGYPLLFCPAEERRELCVDSATLAELDILLHAM 153 Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADG----KKDPQRRQIEKLIATLHASLQQRWSV 203 ++ A L + + L+ +++ I +A + + Q+ S+ Sbjct: 154 AMESRQRSAGAELLLISHLLNLLVLVLRKSCSYVERERFNSDIGIAVAFMRRNYQEEISL 213 Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263 +A SE+ R F +P ++ L+ R+ A+ L + ++GE+A F D Sbjct: 214 PKLARLANLSESSFFRKFREEMKTSPMQWLLNLRIRKAMEFLIRSDMNIGEIAAATGFSD 273 Query: 264 SFHFSKAFKHKFGYAPSAVLKNTD 287 S +FS+ F+ + G +P Sbjct: 274 SLYFSRQFRRQVGVSPKNYRSQAH 297 >UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GD53_GEOUR Length = 291 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 14/221 (6%) Query: 78 NGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIY- 136 G+ + I+ + P +H + F + + +G+ I Sbjct: 70 GGKTVLSQPGQIMAIDPDAVHHEMTADETPRYIAI-FIDRDLFEKELGRYPSIRPRPFRF 128 Query: 137 ------NQELTEVAELITSPEA---IKNNLAVAFLTKIIYQWICLMYADGKKDPQ---RR 184 + + + E + EA + L A T+I++ I + D R Sbjct: 129 RTFTPGREMMGLLKEFMNEAEARLPAREPLLAAIGTRIVHALIRAAHGIITPDASIGNRV 188 Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +I ++I + ++ S+ +AA S + R+F R TG P Y RL+ A L Sbjct: 189 EIHRVIEYIQTHAGKKLSIGQLAAVAAMSTSHFSRIFKRETGHPPLAYLNRVRLEQARKL 248 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 L+ SV VA + F HF+ +F+ +G +P+ LK+ Sbjct: 249 LRTGECSVTSVALSCGFASPSHFTDSFRRFYGQSPTDFLKS 289 >UniRef50_UPI0001C35596 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35596 Length = 279 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 90/255 (35%), Gaps = 9/255 (3%) Query: 34 ISLWHTYADEHY---RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCII 90 + + + HY R P K +P + Y + G + + G + +I Sbjct: 3 LDFNNMIPELHYYIHRKCTPNWKIEPHVIPFIDITYVIDGKAEYNI-GGRTYIVKKGDLI 61 Query: 91 FLKPMDIHSYHCEGLVWEQYWME--FTPTSMMDIPVGQQSVIYNGEIYNQELT---EVAE 145 + S + + F +I + I + ++ E+ E Sbjct: 62 CIPQNTFRSAVNIPEDLMECYSTNIFLRNQFGQEAYLPVPIISHIGIIPRLISRFHEIHE 121 Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVAD 205 + L I+YQ L+ + + +I+ I + + ++ Sbjct: 122 EWVQKDFGYMLKIRGILCLILYQISNLILNENHLSQEDPRIKSSIRYMSLHYAEPLTIDR 181 Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265 MA + LF G T K+Y + RL+ A ++LK SV EVA F D F Sbjct: 182 MAEQFHLHPVYYGSLFREAMGMTFKQYLISLRLNYAENMLKSGEYSVSEVALQCGFSDIF 241 Query: 266 HFSKAFKHKFGYAPS 280 +FSK FK K G PS Sbjct: 242 YFSKLFKEKKGIPPS 256 >UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K6_PAESJ Length = 277 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 79/239 (33%), Gaps = 14/239 (5%) Query: 64 AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIP 123 + +G G ++ +G+ + ++ H + + F + P Sbjct: 40 LLLVEEGRGTFVV-DGKPYEVGPGTVLLYHRGIWHEEWSTHYPFRATYFAFKDLQVKGCP 98 Query: 124 VG------QQSVIYNGE-------IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI 170 Q VI GE + + L E+ + A N+L L ++ Sbjct: 99 QNYFLGPDQAPVIELGEKTDETASLVRECLAELHSGLAESRAAANHLFGLLLARLARLVP 158 Query: 171 CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 P + K + + QQ ++ +A S+ +L LF + G + Sbjct: 159 GESTERRIVKPAEAAVIKARGYIEENYQQPITLEQLAKVTFVSKYYLSHLFQQEVGISVI 218 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 ++ + R++ A L G V E+ + + + F FK G P ++ + Sbjct: 219 QFLIQCRMEAAKRYLIMTGRPVKEIGELVGYQSEPTFHNLFKKVTGLTPGQFRESAREK 277 >UniRef50_UPI0001788DE5 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788DE5 Length = 285 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 100/276 (36%), Gaps = 19/276 (6%) Query: 16 YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75 Y IP + GI ++ + A +Y V P I+ ++ + + G + Sbjct: 13 YGIPSDMERKG---GIWILRAGRSLARPNYSV-------GPKISENYALHFVLNGKISLA 62 Query: 76 LKNGEQITLHGNCIIFLKPMDIHSY-HCEGLV---WEQYWMEFTPTSMMDIPVG---QQS 128 + + +TL L P +SY G W+ + S Sbjct: 63 FGD-KVVTLSAGDAFCLFPHTRYSYWEPNGDPEPTLRMQWIVLDGEAAESALTRIGLHPS 121 Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIE 187 + + L V + I K +YQ L+ A K++ + +E Sbjct: 122 TPFLHNVMKGGLQAVLDQIYGCVDDDTIGHEFGRQKRLYQLFELLAAAPAKRETKPNWLE 181 Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247 + + + + + +V D+ L F+R G +P Y + R++ A LL + Sbjct: 182 QSVHYMDSHYMEGITVTDVVHQAGVHRTHLYCEFIRVHGISPSHYLMKLRMERAAVLLTE 241 Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 SV EVA +L + + FS+AF + +P++ Sbjct: 242 TDVSVTEVAFSLGYSNLHTFSRAFAKYYRISPTSYR 277 >UniRef50_C6J3G2 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3G2_9BACL Length = 289 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 92/246 (37%), Gaps = 10/246 (4%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVW 107 W R ++P + ++T++G G+ L GE ++L + LKP HSY+ W Sbjct: 33 AWERVFQRPEGYPYYHWLHTLEGEGRFELL-GEAVSLTKGKGVLLKPFTPHSYYPVSDRW 91 Query: 108 EQYWMEFTPTS----MMDIPVGQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAVAF 161 ++ F S M + + + GE + ++ I E+ Sbjct: 92 STIYITFGGDSAASIMESLNMNTSTFYEEGEEQSFGALFNDLFRRIDQAESHSEIEVSTD 151 Query: 162 LTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 L + Q + + + +++ ++ + L + ++A L Sbjct: 152 LYYFLMQLRKFGMLNNRPSLSQYYNKLQPIVHWMEQHLADNIGLQEIAEHAHIGMNALHE 211 Query: 220 LFLRYTGKTPKEYYLDARLDLALS-LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278 LF + +P Y + RL A +L+ ++ EVA+ F D HF F+ K G Sbjct: 212 LFQQAFDMSPYSYLIQLRLREAKKIMLQHPNRALREVAEQTGFNDVSHFVATFRKKEGIT 271 Query: 279 PSAVLK 284 P + Sbjct: 272 PGKYRE 277 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 68/158 (43%) Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEK 188 ++ G + E +V +LI+ V K + ++ I K Sbjct: 356 LLETGIATSDESIDVEKLISQILNSSYEQIVEIFKKAVLSLFSKAKTKHEQIINNDSINK 415 Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 I ++ + + +++ +++T + + +LF +YTG + K Y R+ A LLK Sbjct: 416 AIEFINQNYSEEITLSQISSTFNFNPYYFSKLFKKYTGVSFKTYLTKLRIQKACQLLKNT 475 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 S+ E++ + F D +F KAFK G PSA ++ Sbjct: 476 SKSIKEISFAVGFSDPNYFIKAFKKFTGMTPSAFRSSS 513 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 92/258 (35%), Gaps = 19/258 (7%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104 + P + P Y +G + L+N E I+ N ++ + H++ Sbjct: 31 FVSFRPFETFGPHKHLRIEINYVKKGNCILHLEN-ESISFSENEMMVICSNVEHTFEAGS 89 Query: 105 LVWEQYWMEFTPTSMMDIPV------------------GQQSVIYNGEIYNQELTEVAEL 146 +EF P + I N + + + Sbjct: 90 EDTTLMQLEFLPEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVNE 149 Query: 147 ITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADM 206 + L V + +++ + ++K I+ + + Q +++D+ Sbjct: 150 MNQKSKYYQYLVVMYYAELLILIYRYLDEAYLPICTNDSLKKAISYIRLNYQSDITISDV 209 Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266 A+ E +LR+LF +Y +P +Y R++ A+ LL+ SV EV F + Sbjct: 210 ASQTGVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQSPQY 269 Query: 267 FSKAFKHKFGYAPSAVLK 284 FS+ FK + G +P V K Sbjct: 270 FSRIFKQQMGISPREVTK 287 >UniRef50_D2Q274 Transcriptional regulator, AraC family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q274_9ACTO Length = 261 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 88/249 (35%), Gaps = 10/249 (4%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL--VWEQY 110 + W+ T+ G G+ G+ + ++P + Y E W Sbjct: 14 TYRARGTTDWLLFLTLGGRGRFGTFAGDVYA-GPSTATLVRPGTLQDYGVEAELLRWHFR 72 Query: 111 WMEFTPT-------SMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163 + F P + G + + + + +A + ++ + + L Sbjct: 73 YAHFHPKPDWLPLLDWPEAAPGILQLHLSEDAAQRIADNLAAAVRHQSSVLSQGELLSLN 132 Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 + + + K P ++ ++I + L+ VA +A S + LF Sbjct: 133 ALEAALLWADTQNPKATPIDDRLLRVIELIDRDLKADLDVARLARAANLSPSRFAHLFRE 192 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 G TP+++ R++ A LL+ + VA F D +FS F+ G +P+A Sbjct: 193 QLGVTPQQFVERRRIEAARRLLELTTRPISSVAAEAGFPDPLYFSTRFRRHTGISPTAYR 252 Query: 284 KNTDQHPTD 292 ++ P D Sbjct: 253 RDEKARPGD 261 >UniRef50_C2H081 AraC family transcriptional regulator n=31 Tax=Bacilli RepID=C2H081_ENTFA Length = 290 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 102/261 (39%), Gaps = 13/261 (4%) Query: 36 LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPM 95 ++ ++ P ++ S++ +T+ G G++ + +L + F+ Sbjct: 30 FYYIQEIGQFKASRPYYTER-AHLPSYLIKFTLNGTGELRYRY-HTYSLQRGDLFFIDCR 87 Query: 96 DIHSYHC-EGLVWEQYWMEFTPTSMMDI---------PVGQQSVIYNGEIYNQELTEVAE 145 D Y WE W+ F + PV + + + + ++ + Sbjct: 88 DYQYYQATSEEPWEMDWIHFEGGNSGAFFQEFMKNGSPVFSTNQLPEDNPIHLIIQQLLQ 147 Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIEKLIATLHASLQQRWSVA 204 L A + + + +++ + + Y D + + ++ A + ++ S+ Sbjct: 148 LQDLQHAQTDYQSSVLIHQLLNELLLQKYRQDFTYETIPSLVLEMKAYIDQHFKETISLE 207 Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264 D+A ++ L + F +Y G P +Y + ++ + LL+ +V E+A + + Sbjct: 208 DLAQLFHLNKYQLNKEFSKYIGLPPIKYQISKKISYSKDLLRYSNQTVKEIAVDVGLENY 267 Query: 265 FHFSKAFKHKFGYAPSAVLKN 285 +FS+ FK + G PS K+ Sbjct: 268 AYFSRLFKKRTGLTPSQYRKS 288 >UniRef50_C0Z8E4 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8E4_BREBN Length = 548 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 101/259 (38%), Gaps = 13/259 (5%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWE 108 P + ++ + +G G++L + +Q L + L + Sbjct: 25 PTEAWTFSGESTHAVLIVTKGSGRMLSE-SDQAALLDGSALVLSRESARQISADTDDPLR 83 Query: 109 QYWMEFTPTSMMDIPVGQQSVI------YNGEIYNQ--ELTEVAELITSPEAIKNNLAVA 160 F D S ++ +++Q TE+A + + + L Sbjct: 84 FLVFYFDALQQQDQVSNDYSPSLSWHLDHSSCVFHQVDNSTELALTLYAHRQANDPLEAF 143 Query: 161 FLTKIIYQWICLMYADGKKDPQRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 Q + L+++ ++ +++ I+ +H + + ++ D+A + + Sbjct: 144 QNQIRFQQLLHLIWSHAERQATVETSSVVDQTISYMHTNYAEPITLDDLANRAGLTPRYY 203 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 +F + GK+P EY R++ A +LL++ + EVA + + D F+FS+ FK + G Sbjct: 204 TEVFKKKVGKSPIEYLTSCRMEHAKTLLRESNKRLREVARLVGYADEFYFSRRFKQQVGV 263 Query: 278 APSAVLKNTDQHPTDASPH 296 +P+ ++ + + H Sbjct: 264 SPTVFVRMNQKQMAPVTFH 282 >UniRef50_B5JCR2 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCR2_9BACT Length = 282 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 10/242 (4%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFT 115 ++ ++ G G +G + +I + P H+Y + WEQ ++ F Sbjct: 42 RTLGNYALIFIRSGQGTYSDAHGLKHPFAAGDVIQVFPDLAHAYGPDHSGRWEQAYVVFN 101 Query: 116 PTSM-----MDIPVGQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQ 168 I + + G + + + L EV + + T +I Sbjct: 102 GPQFNLLRQAGILTPENPIWQLGPVEYWQRRLEEVFPEAAPQGDSASTRTMGRFTSLITD 161 Query: 169 WICLMYADGKKDPQRRQIEKLIATLHASLQQRW-SVADMAATIPCSEAWLRRLFLRYTGK 227 + A+ K+ PQ+ + + + L + W + + A ++ S R+LF ++ G+ Sbjct: 162 -MAATQAESKQSPQQAWLGESMRLLAEPSSKTWLTPQEAAQSVGLSYENFRKLFAKHVGE 220 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +P + R++ A +++ Q S E+AD F D FHFSK F G +PS K Sbjct: 221 SPAAFQKRRRIEHACAMIYQSSRSFKELADEHGFCDVFHFSKVFSQVMGESPSDYRKRVK 280 Query: 288 QH 289 Sbjct: 281 GQ 282 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 34/261 (13%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-----------YHCEGLV- 106 + + Y +G + + + I + P +HS Y CE + Sbjct: 49 HDYFQIWYVAKGA-FLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFMPS 107 Query: 107 -------------------WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELI 147 + +Y++ + I + + + + L E Sbjct: 108 FVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYERRT 167 Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADG--KKDPQRRQIEKLIATLHASLQQRWSVAD 205 + + L+ + Q + +G K + R + +++ +H Q+ ++ D Sbjct: 168 PFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMNLND 227 Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265 + + S + LF +TGKT Y D R+ A+ +LKQ SV +V + F + Sbjct: 228 LCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFNELS 287 Query: 266 HFSKAFKHKFGYAPSAVLKNT 286 +F + FK G +P+ K Sbjct: 288 YFCRIFKKYTGISPTDFRKQA 308 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P31449 Uncharacterized HTH-type transcriptional regulat... 297 4e-79 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 244 3e-63 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 231 2e-59 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 230 3e-59 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 230 5e-59 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 230 5e-59 UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostri... 227 3e-58 UniRef50_UPI0001788616 transcriptional regulator, AraC family n=... 227 4e-58 UniRef50_C7PPV8 Transcriptional regulator, AraC family n=3 Tax=S... 227 4e-58 UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=C... 225 1e-57 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 225 2e-57 UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostri... 222 1e-56 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 221 2e-56 UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostri... 221 2e-56 UniRef50_A6VAM9 Transcriptional regulator, AraC family n=3 Tax=P... 221 3e-56 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 220 6e-56 UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto... 219 1e-55 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 218 2e-55 UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides R... 218 3e-55 UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=C... 217 3e-55 UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=P... 217 4e-55 UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=C... 217 5e-55 UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID... 217 5e-55 UniRef50_A1U2J4 Transcriptional regulator, AraC family n=3 Tax=M... 216 5e-55 UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=D... 216 6e-55 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 216 6e-55 UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Ta... 216 7e-55 UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=B... 216 7e-55 UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=u... 216 8e-55 UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n... 216 9e-55 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 215 1e-54 UniRef50_A4XS27 Transcriptional regulator, AraC family n=1 Tax=P... 215 1e-54 UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n... 215 1e-54 UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=H... 215 2e-54 UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostri... 215 2e-54 UniRef50_C6XV52 Helix-turn-helix-domain containing protein AraC ... 215 2e-54 UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 ... 215 2e-54 UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=C... 215 2e-54 UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P... 214 3e-54 UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bactero... 214 3e-54 UniRef50_C6IJ00 Transcriptional regulator n=2 Tax=Bacteroides Re... 214 4e-54 UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=P... 213 5e-54 UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridiu... 213 6e-54 UniRef50_C7PUR1 Transcriptional regulator, AraC family n=1 Tax=C... 213 7e-54 UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp.... 213 7e-54 UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=D... 213 8e-54 UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales ... 213 8e-54 UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=C... 212 9e-54 UniRef50_UPI0001C34C27 transcriptional regulator, AraC family pr... 212 1e-53 UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella ori... 212 1e-53 UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ... 211 2e-53 UniRef50_P28809 MmsAB operon regulatory protein n=6 Tax=Pseudomo... 211 2e-53 UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerot... 211 2e-53 UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptoco... 211 2e-53 UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminoc... 210 4e-53 UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=C... 210 4e-53 UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bactero... 210 4e-53 UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1... 210 4e-53 UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales... 210 5e-53 UniRef50_A4AC34 Transcriptional regulator, AraC family protein n... 210 6e-53 UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabac... 210 7e-53 UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS fami... 210 7e-53 UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C... 210 7e-53 UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales ... 209 1e-52 UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=M... 208 1e-52 UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales ... 208 1e-52 UniRef50_C6IY48 AraC family transcriptional regulator n=1 Tax=Pa... 208 2e-52 UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=C... 208 2e-52 UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pe... 208 2e-52 UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1... 208 2e-52 UniRef50_A6M1I8 Transcriptional regulator, AraC family n=1 Tax=C... 208 2e-52 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 208 2e-52 UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides Re... 207 3e-52 UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=P... 207 3e-52 UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococ... 207 4e-52 UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostri... 207 4e-52 UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=L... 206 5e-52 UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Or... 206 5e-52 UniRef50_B8KL56 AraC protein, arabinose-binding/dimerisation n=1... 206 8e-52 UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus s... 206 9e-52 UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Ba... 205 1e-51 UniRef50_C9KYS9 Transcriptional regulator n=7 Tax=Bacteroides Re... 205 2e-51 UniRef50_C5BZM6 Transcriptional regulator, AraC family n=1 Tax=B... 205 2e-51 UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulator... 205 2e-51 UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=P... 205 2e-51 UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=D... 205 2e-51 UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=J... 205 2e-51 UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=B... 204 2e-51 UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales ... 204 4e-51 UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Ba... 204 4e-51 UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon tra... 203 6e-51 UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1... 203 6e-51 UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=S... 203 7e-51 UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=b... 202 1e-50 UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=P... 202 1e-50 UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=R... 202 1e-50 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 201 2e-50 UniRef50_UPI00017450D3 transcriptional regulator, AraC family pr... 201 3e-50 UniRef50_C6LM61 Putative raffinose operon transcriptional regula... 201 3e-50 UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=La... 200 4e-50 UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein,... 200 4e-50 UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=M... 200 7e-50 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 200 7e-50 UniRef50_C9AKD6 AraC-type DNA-binding domain-containing protein ... 199 8e-50 UniRef50_A8YTU0 Msm operon regulatory protein n=3 Tax=Lactobacil... 199 9e-50 UniRef50_B0MEA0 Putative uncharacterized protein n=1 Tax=Anaeros... 199 1e-49 UniRef50_B8FW52 Transcriptional regulator, AraC family n=2 Tax=D... 199 1e-49 UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=... 198 1e-49 UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=P... 198 1e-49 UniRef50_A5ZSJ3 Putative uncharacterized protein n=4 Tax=Clostri... 198 2e-49 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 197 3e-49 UniRef50_A0Y944 Transcriptional regulator, AraC family protein n... 197 5e-49 UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecali... 196 7e-49 UniRef50_D2Q7T6 AraC-type transcriptional regulator n=2 Tax=Bifi... 196 8e-49 UniRef50_B0MNH5 Putative uncharacterized protein n=1 Tax=Eubacte... 196 8e-49 UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=S... 196 9e-49 UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=L... 196 9e-49 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 196 1e-48 UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivor... 196 1e-48 UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=B... 196 1e-48 UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=P... 195 1e-48 UniRef50_B8H8F4 Transcriptional regulator, AraC family n=1 Tax=A... 195 2e-48 UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax... 195 2e-48 UniRef50_B0MR70 Putative uncharacterized protein n=1 Tax=Eubacte... 195 2e-48 UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C... 194 3e-48 UniRef50_Q5WK33 AraC/XylS family transcriptional regulator n=1 T... 194 4e-48 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 193 4e-48 UniRef50_A0QZE6 MmsAB operon regulatory protein n=1 Tax=Mycobact... 193 5e-48 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 193 5e-48 UniRef50_A9KKI4 Transcriptional regulator, AraC family n=1 Tax=C... 193 5e-48 UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostri... 193 5e-48 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 193 6e-48 UniRef50_P43465 Raffinose operon transcriptional regulatory prot... 193 7e-48 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 193 7e-48 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 193 8e-48 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 192 1e-47 UniRef50_Q5WK82 AraC/XylS family transcriptional regulator n=1 T... 192 1e-47 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 192 1e-47 UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=L... 192 1e-47 UniRef50_C6CWX0 Transcriptional regulator, AraC family n=1 Tax=P... 192 1e-47 UniRef50_C6D174 Transcriptional regulator, AraC family n=1 Tax=P... 192 1e-47 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 191 2e-47 UniRef50_C6D3L8 Transcriptional regulator, AraC family n=1 Tax=P... 191 2e-47 UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=L... 191 2e-47 UniRef50_A4XK77 Transcriptional regulator, AraC family n=2 Tax=C... 191 2e-47 UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bactero... 191 3e-47 UniRef50_C6D787 Transcriptional regulator, AraC family n=1 Tax=P... 190 4e-47 UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostri... 190 5e-47 UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostri... 190 5e-47 UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi... 190 6e-47 UniRef50_C6D447 Transcriptional regulator, AraC family n=1 Tax=P... 190 7e-47 UniRef50_C7G8V7 Putative raffinose operon transcriptional regula... 190 7e-47 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 190 8e-47 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 189 9e-47 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 189 1e-46 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 189 1e-46 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 189 1e-46 UniRef50_C2EN40 AraC family transcriptional regulator n=2 Tax=La... 188 2e-46 UniRef50_A5ZYS8 Putative uncharacterized protein n=1 Tax=Ruminoc... 188 2e-46 UniRef50_UPI000196AF05 hypothetical protein CATMIT_01210 n=1 Tax... 188 2e-46 UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabin... 188 2e-46 UniRef50_C7Q5G1 Transcriptional regulator, AraC family n=1 Tax=C... 188 2e-46 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 188 2e-46 UniRef50_C0X7J7 AraC family transcriptional regulator n=22 Tax=E... 188 3e-46 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 187 3e-46 UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type... 187 5e-46 UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=C... 186 6e-46 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 186 6e-46 UniRef50_C8Q370 Transcriptional regulator, AraC family n=1 Tax=P... 186 7e-46 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 186 7e-46 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 186 8e-46 UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family prot... 186 8e-46 UniRef50_O33813 Lactose operon transcription activator n=4 Tax=S... 186 9e-46 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 185 1e-45 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 185 1e-45 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 185 2e-45 UniRef50_UPI0001788A2C transcriptional regulator, AraC family n=... 185 2e-45 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 185 2e-45 UniRef50_C7T9S5 Putative transcriptional regulator n=2 Tax=Lacto... 184 3e-45 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 184 3e-45 UniRef50_Q6PU53 BgaR n=2 Tax=Bacillus megaterium RepID=Q6PU53_BACME 184 3e-45 UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-... 184 3e-45 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 184 4e-45 UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n... 184 4e-45 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 183 4e-45 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 183 5e-45 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 183 5e-45 UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 T... 183 5e-45 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 183 5e-45 UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=C... 183 7e-45 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 183 9e-45 UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=C... 183 9e-45 UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopi... 182 1e-44 UniRef50_A4BF96 Arabinose operon regulatory protein n=1 Tax=Rein... 182 1e-44 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 182 1e-44 UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc... 182 1e-44 UniRef50_B0N996 Putative uncharacterized protein n=1 Tax=Clostri... 182 1e-44 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 182 1e-44 UniRef50_B0NXL6 Putative uncharacterized protein n=1 Tax=Clostri... 182 2e-44 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 181 2e-44 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 181 2e-44 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 181 2e-44 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 181 2e-44 UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=P... 181 3e-44 UniRef50_UPI0001788DE5 transcriptional regulator, AraC family n=... 181 3e-44 UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=P... 181 3e-44 UniRef50_C6JAN7 Helix-turn-helix domain-containing protein n=2 T... 181 3e-44 UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=... 181 3e-44 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 181 4e-44 UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=P... 180 4e-44 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 180 4e-44 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 180 4e-44 UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D... 180 5e-44 UniRef50_C6D456 Transcriptional regulator, AraC family n=1 Tax=P... 180 5e-44 UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=P... 180 5e-44 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 180 5e-44 UniRef50_C6IZ62 Transcriptional regulator n=1 Tax=Paenibacillus ... 180 6e-44 UniRef50_UPI0001C35596 transcriptional regulator, AraC family pr... 179 7e-44 UniRef50_C4FY02 Putative uncharacterized protein n=1 Tax=Catonel... 179 7e-44 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 179 7e-44 UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibr... 179 9e-44 UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus c... 179 9e-44 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 179 1e-43 UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=P... 179 1e-43 UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10 Tax=... 179 1e-43 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 179 1e-43 UniRef50_UPI0001788D3A transcriptional regulator, AraC family n=... 178 1e-43 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 178 1e-43 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 178 1e-43 UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=P... 178 2e-43 UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonel... 178 2e-43 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 178 2e-43 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 178 2e-43 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 178 2e-43 UniRef50_C4Z413 AraC family transcriptional regulator, arabinose... 178 2e-43 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 178 2e-43 UniRef50_C4ZBP1 Two-component response regulator n=2 Tax=Clostri... 178 2e-43 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 178 2e-43 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 178 2e-43 UniRef50_C6J3G2 Transcriptional regulator n=1 Tax=Paenibacillus ... 178 3e-43 UniRef50_A5Z7W7 Putative uncharacterized protein n=1 Tax=Eubacte... 177 3e-43 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 177 4e-43 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 177 4e-43 UniRef50_C2H081 AraC family transcriptional regulator n=31 Tax=B... 177 4e-43 UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ... 177 5e-43 UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA met... 177 5e-43 UniRef50_P07642 Arabinose operon regulatory protein n=160 Tax=Pr... 176 6e-43 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 176 7e-43 UniRef50_UPI0001C37EF8 AraC family transcriptional regulator n=1... 176 7e-43 Sequences not found previously or not previously below threshold: UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 181 3e-44 >UniRef50_P31449 Uncharacterized HTH-type transcriptional regulator yidL n=55 Tax=Enterobacteriaceae RepID=YIDL_ECOLI Length = 297 Score = 297 bits (760), Expect = 4e-79, Method: Composition-based stats. Identities = 297/297 (100%), Positives = 297/297 (100%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN Sbjct: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM Sbjct: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120 Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD Sbjct: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180 Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL Sbjct: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN Sbjct: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 99/252 (39%), Gaps = 14/252 (5%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101 + + P P + + ++ V G G + G TL + KP + +Y Sbjct: 23 NCGHEYCVPGHTWGPGVRDHYLIHLVVAGKGVYQVG-GVSHTLQEGDLFLAKPNQLITYA 81 Query: 102 CEG-LVWEQYWMEFTPT----SMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156 + WE YW+ F + P +++ + + + S Sbjct: 82 ADETDPWEYYWVGFNGACANKLVQQTPFSDLHPVHHCKDPQAVREALYNIYLS--RGPEP 139 Query: 157 LAVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLHASLQQRWSVADMAATI 210 A +T +Y ++ + + + + + I + + SV D+A + Sbjct: 140 QCEALMTGYLYIFMAHLMKEARDAMPNVGSSSSQYVLSAIKYIQFNYSHDISVDDIAKAV 199 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 S + L R+F+ G++P +Y + R+ A SLLK S+ E+A ++ FFD F+FS+ Sbjct: 200 GVSRSHLYRVFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRV 259 Query: 271 FKHKFGYAPSAV 282 FK G PS Sbjct: 260 FKKVKGVPPSKY 271 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 96/250 (38%), Gaps = 10/250 (4%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101 + P P I + ++ V G G + G + + F +P + Y Sbjct: 23 NCGLERCAPGQTWGPGIRDHYLIHLVVSGKGIFEVG-GRTWEVSEGDLFFARPSQLIRYT 81 Query: 102 CEGL-VWEQYWMEFTPT----SMMDIPVGQQSVIYNGEIYNQELTEVAELITSP--EAIK 154 + WE W+ F +P + +++ + + + +S + Sbjct: 82 ADEQQPWEYSWVGFNGACAHKLAAQLPFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQD 141 Query: 155 NNLAVAFLTKIIYQWICLMYA--DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 V +L I + A + + I + + S+ D+A ++ Sbjct: 142 EAAMVGYLYLFIAALMRETSAGKPHTASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGV 201 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 S + L R+F+ GK+P +Y + R++ A LL+ S+ EVA ++ FFD F+FS+ FK Sbjct: 202 SRSHLYRVFMLNVGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFK 261 Query: 273 HKFGYAPSAV 282 G PS Sbjct: 262 RAKGVPPSKY 271 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 114/296 (38%), Gaps = 21/296 (7%) Query: 6 QSSDVKNETPYNIP----LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61 + NE IP L I EN ++ + + + E + +++ + Sbjct: 4 KKDGFPNEKAIVIPQENLLRIKENPMTRLLHPTDVGYYPCAEGH------YRERTEGSPQ 57 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMM 120 + +Y +G G + G+ T+ N ++ H Y W YW+ FT Sbjct: 58 HILIYCHEGEGWYNIGKGK-CTVKKNDFFIIEAGTPHVYAASTSHPWSIYWIHFTGEQSH 116 Query: 121 DIPVGQQSVIYNGE----IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL---- 172 IY + +N + E++ + E + + ++T ++ + Sbjct: 117 LFSELFNRTIYIDDSPTARFNDRIQLFNEILVNLEMGYSIENLEYITLCLWYLLGSFRYI 176 Query: 173 -MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 + + K + I+K+I + A+L ++ ++ DMA ++ S +L LF + +G +P Sbjct: 177 PQFREINKPKTQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSGMSPIN 236 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 Y+ ++ A LL E+A L F D ++FSK F +P Sbjct: 237 YFNQLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSPKEYRMKKK 292 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 96/256 (37%), Gaps = 11/256 (4%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 ++ + P I + ++ Y + G G+ + NG TL + P Y + Sbjct: 25 GFQSCDSLYQWGPGIRDHYLIHYIISGKGRYTV-NGSVHTLTPGDAFLVYPNTEVIYQAD 83 Query: 104 -GLVWEQYWMEFTPTSMMDIPVGQQ--------SVIYNGEIYNQELTEVAELITSPEAIK 154 WE W+ FT + I + NG ++L + + E Sbjct: 84 AQDPWEYTWVGFTGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYD-ARGTEFEN 142 Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 L + ++ + ++ ++K I + A+ +V D+A+ I S Sbjct: 143 ALEMTGRLYTTLALFVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIGLSR 202 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 + L R F G +PKEY D R+ A LLK S+ +A ++ F +S +FSK F Sbjct: 203 SHLFRSFQSILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKI 262 Query: 275 FGYAPSAVLKNTDQHP 290 G +P + Sbjct: 263 KGLSPKEYRSKYKKAQ 278 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 12/255 (4%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104 P P + + + + G G + ++ GE L G P + Y + Sbjct: 27 ERCAPLHSFGPGVRDIYKIHFIHSGRGIVKVE-GETFELTGGQAFLAYPERVIFYQADEV 85 Query: 105 LVWEQYWMEFTPTSMMDIP-----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159 W W+ F + +I V+ +L E+ ++ Sbjct: 86 DPWTYSWIGFNGEQVAEILSRTRLTPASPVLPMDTHLMPQLYELLNEAEESNTTRDLRLQ 145 Query: 160 AFLTKIIYQWICLMYADG-----KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 L + + + L+ A G + + I + + LH+ + SV +AA + Sbjct: 146 TLLYEFMTLLVELVPASGDADSTRTQAKDAYIHRCLDFLHSHYSEEMSVGQLAAIVGLDR 205 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 +L LF R TG P++Y L R++ A +LL+ S+ EVA ++ + D+ FSK FK Sbjct: 206 KYLSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQDALLFSKMFKKT 265 Query: 275 FGYAPSAVLKNTDQH 289 G +PS + + Sbjct: 266 VGTSPSDYREQWQKS 280 >UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGA4_EUBSP Length = 295 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 115/289 (39%), Gaps = 9/289 (3%) Query: 2 NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61 N ++ K+E IP N L+ + + +++ A Sbjct: 3 NNIGKADGFKDEKYIIIPTESFANYAEHP--LVRTVYPTDVGFFPKARDHYRERKEGAEQ 60 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMM 120 ++ +Y +G G I ++ GE + + + H Y+ + W W+ F + Sbjct: 61 YILIYCTEGKGTIEVE-GEVFEMRKSGAFCIPCKKGHRYYADAKDPWSILWVHFKGENTA 119 Query: 121 DIPVGQQSVIYNGEIYNQ-----ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 P+ + V+ ++ + ++ + N + ++ + +I + Sbjct: 120 YFPIDEPHVVPMNSRHSDNRMMVLFNLLFRVLRRNYTLGNFIYISQVLSLILSEVYYREK 179 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 + Q R + +I ++ +L + ++ +++ + S ++L +F TG++P E+++ Sbjct: 180 VDESSVQDRHVTMVIRFMYENLTRSLTLEEISEEVQLSRSYLNTIFKNQTGRSPVEFFIH 239 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 ++ A LLK + EV+ L + D ++FS+ FK G +P Sbjct: 240 LKMQEACKLLKNTNLYIYEVSSRLGYEDQYYFSRIFKKVVGVSPKDYKN 288 >UniRef50_UPI0001788616 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788616 Length = 297 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 111/294 (37%), Gaps = 13/294 (4%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 M+ + +++ +P I + + SL+ H ++ +++P + Sbjct: 1 MDTIRKPDGFESQKIIVLPDHIMKEA--ARHSLVEPLHVTDVGYFPRALHHYRERPEGSG 58 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSM 119 +++ +Y +G G L G+ +L + + P H Y W YW T Sbjct: 59 AYILIYCAEGEGWYRLNGGKTYSLLKGQAVVIPPDTPHEYASSEFHPWSIYWWHMKGTHA 118 Query: 120 MDIPVGQQS-------VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII---YQW 169 + G + + E EL+ + + + V+ L + + Sbjct: 119 GLLFEGFTGAAEPAIVPVDQSRSIVELFQESYELLQKGYTLNHIIHVSQLAGHLAAIIRL 178 Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229 L G+ + +E+ + + L+ S+ ++AA S F TG +P Sbjct: 179 ARLQPQRGQHQHNKHDMEQTLRFMTEHLEGHVSLKELAAYANLSIPHFTFRFKEATGYSP 238 Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 +YYL ++ A L G SV E++ L F D ++FS+ FK G +PS Sbjct: 239 IDYYLRLKIQRACQHLDLTGESVKEISHRLGFQDPYYFSRLFKKIMGKSPSEYR 292 >UniRef50_C7PPV8 Transcriptional regulator, AraC family n=3 Tax=Sphingobacteriales RepID=C7PPV8_CHIPD Length = 306 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 105/298 (35%), Gaps = 12/298 (4%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 M + + E ++P + +N I L L+ T+ R + + + Sbjct: 1 MGTLKRRDGFEGEQLISLPESVWKNAIKINPVLGQLYITHIGYFPRAAFH-YRDREKGCI 59 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGL-VWEQYWMEFTPTS 118 + +Y G G + + + N + + + Y + W YW+ FT Sbjct: 60 DNILIYCTHGKGWYSIDD-RTFKVGMNEYVIIPATELPLRYGSDDENPWSIYWVHFTGKD 118 Query: 119 MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN--------LAVAFLTKIIYQWI 170 M G +Y+G + + +L + A L + ++ Sbjct: 119 MAAFNQGFNIGLYDGPRHIHRNEKGIQLWNTMFQCLKMGFGKDNLGKANLHLYHFLATFL 178 Query: 171 CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 +++ R +I + I + L +V ++A + S + LF + TG +P Sbjct: 179 FPDKTPREQEQSRDRINETILYMQQHLTVALTVEELAQLVELSPSHFSTLFKKTTGMSPL 238 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 Y++ +L A LL + +V + + D +HFS+ FK +P + Sbjct: 239 NYFIHLKLQQACLLLYTTDMKIKQVGVAIGYDDPYHFSRLFKKSMHVSPEHYRGMRRK 296 >UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=A9KN44_CLOPH Length = 278 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 10/253 (3%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 Y+ P + P + + ++ Y V G G N + L + + P +Y+ + Sbjct: 27 GYQRCEPNYQWGPGVRDHYLIHYIVSGKGYYET-NHKTFPLTSGDVFLIYPDTQVTYYAD 85 Query: 104 G-LVWEQYWMEFTPTSMMDIP----VGQQSVIYN----GEIYNQELTEVAELITSPEAIK 154 WE YW+ F+ + I +S + + GE +L ++ E + A Sbjct: 86 ALDPWEYYWVGFSGSDAGLILEATDFSNESPVISSCSYGEKVKDQLYQIYEARGNEFANA 145 Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 +A + + K ++K I + + ++ D+AA + S Sbjct: 146 VAMAGQLYITLSLFLSGASNHNKKHHQNLDYVQKGITYMESHFSYPITIDDVAAYVGISR 205 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 + L R F + GK+PKEY + R+ + +LLK S+G +A ++ + + ++SK F+ Sbjct: 206 SHLFREFKAHLGKSPKEYLSEYRIKYSCTLLKNTDLSIGAIATSVGYDNGLYYSKVFQSV 265 Query: 275 FGYAPSAVLKNTD 287 G PS Sbjct: 266 KGMPPSKYRNLHS 278 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 92/254 (36%), Gaps = 13/254 (5%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 K P + S+V +G G + G+ L ++P + Y Sbjct: 57 CGREDCIKGWKFGPYVRESYVIHIVKKGKGVFTIG-GKSYELEAGQAFIIRPGEETIYKA 115 Query: 103 EGL-VWEQYWMEFTPTSMMDIPVG----QQSVIYNGEIYNQELTEVAELITSPE--AIKN 155 + W W+ F D + S I E + T + ++ + I Sbjct: 116 DDDDPWSYMWVGFHGYRAEDFIESMGYKKDSPIIKIEQMDTCATCINNMLEYSQITRINE 175 Query: 156 NLAVAFLTKIIYQWIC-----LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210 + L + + D + P + ++ + + + + D+A I Sbjct: 176 VKRQSALMMLFATIMEDNTSGQQENDNVEYPSKIYVKAAVDFITEKYMNKIKIDDIADFI 235 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 S + L F + G +P+EY ++ RL+ A SLL+ + +A + DS FSKA Sbjct: 236 GISRSHLTGSFKKEMGVSPQEYLINFRLEKAASLLRSSKEQINIIAYQCGYEDSLSFSKA 295 Query: 271 FKHKFGYAPSAVLK 284 FK KFG +P + Sbjct: 296 FKQKFGMSPKSFRN 309 >UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVL0_9CLOT Length = 282 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 9/257 (3%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101 + ++ P P + + ++ Y G G +G+ +L + P + +Y Sbjct: 27 NCGFQRCSPGHTWGPAVRDHFLIHYITSGKGVYDSGSGK-YSLSAGDGFLVVPNRLITYW 85 Query: 102 CE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGE---IYNQELTEVAELITSPEAI 153 + WE YW+ F T + + + I++ + +Y ++L + L + + Sbjct: 86 ADQSDPWEYYWVGFNGTDAERLVCEAGLSAEQPIFHYDKDSLYREKLLNIYRLNGNRPSD 145 Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 + + L+ + +K ++K + + + + V D+AA + S Sbjct: 146 QARMQAGLLSFMAAMMDRRPLDIQEKKSGYEYVKKSLQFIDYNYSRSIDVDDIAANVGIS 205 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 + L RLF+++ P EY R+ A LL+ SVGE A + F D +FS+ FK Sbjct: 206 RSHLYRLFMKHISVPPNEYLTRYRIQKASLLLESSNLSVGEAAYSTGFSDQLYFSRVFKK 265 Query: 274 KFGYAPSAVLKNTDQHP 290 G +PS K + + Sbjct: 266 YKGLSPSQYSKRSHEKK 282 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 98/255 (38%), Gaps = 10/255 (3%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 Y P +++ ++G G ++ N ++ L ++P + Y Sbjct: 17 CGYSECESLHSFGPASRPTYILHIVLEGKGIFVVDN-KKYFLEKGQGFIIEPNIVTFYQA 75 Query: 103 E-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV-- 159 + W+ +W+ F + + +L E+ L+ KN Sbjct: 76 DAKNPWKYFWIGFDGEGAEKYLRELGIIQHKPIFRTDKLDELFSLLKEMLKRKNLTLAEE 135 Query: 160 AFLTKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 L + Y++ L+ + +K+ ++K+I + + +V ++ + + Sbjct: 136 LKLQGLFYEFFSLIVEENSIEEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEYVGLN 195 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 ++L LF + G T +EY RL A LL S+ VA++ + D F+KA+K Sbjct: 196 RSYLSTLFKKNMGITIQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFTKAYKK 255 Query: 274 KFGYAPSAVLKNTDQ 288 K+G P+ K + Sbjct: 256 KYGVTPTQHRKKDRK 270 >UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0R7_9CLOT Length = 322 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 112/285 (39%), Gaps = 9/285 (3%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 ++ K+E IP + + + + +++ A ++ + Sbjct: 34 KADGFKDEKYIIIPTESFSDYAEHPLVRTI--YPTDVGFFPRARAHYREREDGAQQYILI 91 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPV 124 Y +G G I +++ + + + H Y+ + W W F + P+ Sbjct: 92 YCTEGKGCIEVED-RTYHIGRSDAFCIPKGRRHKYYADPEDPWSILWAHFKGEVTLCYPL 150 Query: 125 GQQSVIYNGEIYNQ-----ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179 + V++ + + ++ + N + ++ + +I I + Sbjct: 151 EECRVVHMNSRQSDNRMMVLFKLLFRVLERNYTLGNFIYISQVLSLILSEIYFREKTDES 210 Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239 Q R + +I ++ +L++ ++ +++ + S ++L +F TG++P E+++ ++ Sbjct: 211 TVQDRHVTMVIRFMYENLKRSLTLEEISEEVKLSRSYLNTIFKTQTGRSPVEFFIHLKMQ 270 Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 A LLK + EV+ L + D ++FS+ FK G +P Sbjct: 271 EACKLLKATDMYIYEVSSELGYEDQYYFSRIFKKVVGVSPRDYKN 315 >UniRef50_A6VAM9 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas aeruginosa RepID=A6VAM9_PSEA7 Length = 293 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 108/289 (37%), Gaps = 14/289 (4%) Query: 5 LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64 L + V+ TP + + + + ++L + Y + H + + + + Sbjct: 12 LPNQGVRFITPPRLRRALARHPLGQACYPLALGY-YPEAH------GHRMQRRTPDDHLL 64 Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP 123 +Y G G + GE++ + G ++ L H+Y + W YW+ F D Sbjct: 65 IYCRAGRGWLECA-GERVEVGGGDLLVLPKGLEHAYGADSQRPWSIYWVHFEGVLAEDFL 123 Query: 124 VGQQSVIY-NGEIYNQELTEVAELITSPEAIKNN----LAVAFLTKIIYQWICLMYADGK 178 SV + + L E L+ + A L ++ Sbjct: 124 HPLGSVPRLRLGMQPRLLAEFDALLALRRQGLSLPHFIHAAHLLQGLLTSLAVRPARASL 183 Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 K + I+ + A + A L ++ ++AA S + + TG+ P + ++ ++ Sbjct: 184 KSGRVLDIDAVQALMRAHLHDSLNLDELAAQFKLSRFHFAKTYRALTGQAPIQDFIQMKM 243 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 A LL + V ++A+ L + D ++FS+ F+ G APS Sbjct: 244 AHACRLLDEGALEVRQIAEQLGYADPYYFSRLFRKVVGMAPSHYRALHQ 292 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 101/262 (38%), Gaps = 18/262 (6%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE----QITLHGNCIIFLKPMDI 97 + P P N ++ Y + G G ++ N + + + P I Sbjct: 21 QFGHEQCEPGHSFGPATRNHYLFHYVLSGTGTLMADNAKGITQTYNIKSGQGFLIFPGQI 80 Query: 98 HSYHCEGL-VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEA 152 ++Y + WE W+EF + + + + + +Y+ + V E++ Sbjct: 81 NTYIADDKLPWEYIWIEFDGLRVKEALTTTELTKNNPVYHTHSKDIREKLVEEMLYITRH 140 Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDP-------QRRQIEKLIATLHASLQQRWSVAD 205 + L +Y ++ + K I++ + + + Q S+ D Sbjct: 141 PSESPY--HLIGHMYLFLDYLMQSAKSSKLVPGGKMSDFYIKEAMNYIEQNFQNDISIED 198 Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265 +A + ++L ++F G +P+E+ ++ R+ A LLK S+ +V + + + Sbjct: 199 IAGVCGINRSYLGKIFKNSVGHSPQEFLMNYRMIKATELLKLTSLSIADVGSAVGYENQL 258 Query: 266 HFSKAFKHKFGYAPSAVLKNTD 287 HFS+AFK+ +G AP Sbjct: 259 HFSRAFKNIYGVAPREWRNEHK 280 >UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE Length = 288 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 117/277 (42%), Gaps = 14/277 (5%) Query: 25 NVISSGISLISLWHTYADEHY--RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82 N++++ + +HY + P + +++V + V G GK + +G Sbjct: 13 NILNTYNEFNTNNFDLNVDHYGAEICAKNYSFGPTVRDNYVLHFIVDGKGKFTI-DGITT 71 Query: 83 TLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSV---IYNGEIYNQ 138 L + L + Y +G W W+ F+ + +I Q + + + ++ Sbjct: 72 QLKTGDMFILPKGKVAFYQADGEHPWTYLWVGFSGSKAENILSKTQLLDHYFCHSTLESK 131 Query: 139 ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIA 191 L ++ +L + +++ LT +Y+ + + + + I+++ Sbjct: 132 VLDQIVKLTQFRDQKLDDVTELQLTAELYKLLAFLMKEFPSKAMSDSSILIQNYIKQVKK 191 Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251 +H ++++A + + ++L ++F T + K+Y + R++ + LL + Sbjct: 192 IIHTQYGNPLKISEIAKKLNLNRSYLYKIFKEETDYSLKDYLIQIRMEKSADLLTRTTFH 251 Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 + E+A+ + F D+ FSKAFK FG +PS K + Sbjct: 252 ISEIANAVGFPDALAFSKAFKKHFGQSPSHYRKALKK 288 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 91/254 (35%), Gaps = 8/254 (3%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 + + P K P + ++ + ++G G +K G L ++P +Y Sbjct: 22 FGHSITEPLHKAGPAVKTFYLIHFVLEGEGDFYVK-GAHYHLKKGQGFLIEPDTPATYIS 80 Query: 103 EGL-VWEQYWMEFTPTSMMD----IPVGQQSVIYNGEIYNQELTEVAELITSPEAI--KN 155 + W W F+ D I + Q I+ E ++ V +++ + + Sbjct: 81 DEHHPWRYVWFGFSGRCAHDTLSSIGLTQNQPIFTCEDGDKLKKYVFDMLAHNTSGHADH 140 Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 + L + + + I+ + V +++ + + + Sbjct: 141 YRLMGMLYLALSVIANAQKDKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRS 200 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 + LF +YTG +P +Y + R+ A +L SV +A + + + F K F+ Sbjct: 201 YFSDLFKQYTGMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTT 260 Query: 276 GYAPSAVLKNTDQH 289 G +P+A Q Sbjct: 261 GLSPNAYRLGKRQR 274 >UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides RepID=A6KXZ8_BACV8 Length = 306 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 118/294 (40%), Gaps = 11/294 (3%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 M+ Q +D K +V + G I Y ++ + +K + + Sbjct: 1 MHYNDQGADFKYLIVNERDKRFGLSVTTVGFQAIRAGSVYPPRNHPDAYYFTAQKGRVLH 60 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM 119 + VY +G G + + I+FL P H+Y + W +Y++ F + Sbjct: 61 EYQLVYITKGRGTFASDTTPSVDISKGQILFLFPGQWHTYAPLQKTGWNEYYIGFEGPII 120 Query: 120 MDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 ++ + ++S I + I N+EL + A +L+ I+ + + A Sbjct: 121 DNLVKNSFISKESQILDIGI-NEELASLFARALEVAEADKTAAQQYLSGIVLHIMGAVLA 179 Query: 176 DGKK-----DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 + D ++IE +H ++ + ++A + S +W R++F YTG P Sbjct: 180 ISQNKRYEVDNAAQKIESAKIIMHENVYKDIDPEELAMKLGISYSWFRKVFKEYTGYAPA 239 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 +Y+ + +L A LL + SV E+ LN+ + HF FK + + P+ Sbjct: 240 KYFQELKLRKAKQLLIESSMSVKEICYELNYTSTEHFFSVFKKRTNFTPTEYRN 293 >UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RH22_CLOCL Length = 278 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 99/272 (36%), Gaps = 11/272 (4%) Query: 21 LINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80 + +IS I+ + P+ P I + ++ Y + G GK NG+ Sbjct: 3 INERYIISESINKENRDLLVYHHGIEQCIPKHCYGPAIRDHYLIHYILAGKGKFH-ANGK 61 Query: 81 QITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNG-- 133 L + P + Y + W W+ F + ++I+N Sbjct: 62 IYELVTGDGFLILPDMVTFYEADENEPWTYVWIGFRGIKAAAYLESANLNMNNLIFNCTS 121 Query: 134 EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD--GKKDPQRRQIEKLIA 191 EI + ++ + +L+ I+ + I + D + K + Sbjct: 122 EILKEYFFKIMN-ANLYSSGYELRLQGYLSIILSELIDISAMDILDTNKHSDIYVRKALQ 180 Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251 + + SV +A I + + +F ++ G +PKEY + ++ A LK + Sbjct: 181 YIETNYSGSTSVDAVAKAIGLNRNYFSTIFKKHIGISPKEYIIRYKIGKACEFLKNNSLT 240 Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 + E++ ++ + D FSK FKH G +P Sbjct: 241 ISEISKSVGYNDPLSFSKVFKHIKGVSPKYYR 272 >UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D140_PAESJ Length = 296 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 113/297 (38%), Gaps = 12/297 (4%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 M+ L+ ++ +P I + LI H + + +P + Sbjct: 1 MDRLLKEEGFPSQKLIVLPDHILAEY--AAHPLIRPLHITDIGCFPYARHHYRHRPEGSE 58 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM 119 +++ +Y GCG + L + +++ + + + H Y E W YW+ Sbjct: 59 AYIVMYCTDGCGWVKLDDEKRLEVRKGELTLIPAGTPHEYGSSEEEPWTIYWIHLKGELA 118 Query: 120 MDIPVGQQ------SVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM 173 Q + E E++ + + + V+ L + I L+ Sbjct: 119 FSFFGEQGKAAPVPIPVERSSAIIGLFDECYEMLLKGYTLDHVIYVSQLACHLAGIIRLV 178 Query: 174 YADGKKDPQRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 A + P R+ IEK I + L+ S+A++AA S +LF + TG +P Sbjct: 179 QAHRQAAPSPRRQLDIEKAIQYMTEHLEDNVSLAELAAEAALSVPHFTQLFKKKTGYSPI 238 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +YYL ++ LA L SV V + F D ++FS+ FK G +PSA Sbjct: 239 DYYLRLKIQLASQYLDLTDQSVKAVGIRVGFQDPYYFSRLFKKIMGKSPSAYRSTHK 295 >UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488V5_COLP3 Length = 290 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 108/287 (37%), Gaps = 15/287 (5%) Query: 5 LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64 L + ++ TP+ + + + ++ G+ + ++ + + + Sbjct: 9 LTADGIRFITPHVLVKRLQNHALAKGLFVTAMGYYPTASG-------HAMERKGHPDHIL 61 Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDI- 122 +Y G G L G+ ++ I +L HSY W YW+ F T D Sbjct: 62 IYCTAGSG-FLTMAGKTTEINSGDIFYLPAGSQHSYQASKELPWTLYWLHFDGTLANDFC 120 Query: 123 ----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178 V ++ I + ++ L S + + + + +I L+ K Sbjct: 121 QHINIVERKFTIGVQPRVIRVFDGISHLRHSSHNLAEFIQGGHQVQALLSYIALLVQQRK 180 Query: 179 KDPQRR-QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 E L A + + + + +A S+ + F + TG++P Y+++ + Sbjct: 181 PSAINTFDTENLRAMMQEHIHSKLDLDSLAEAAKLSKYHFSKKFKQVTGESPISYFINMK 240 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 + A LL SV VA L + D+++FS+ FK G AP+ K Sbjct: 241 MQRACYLLDSTPRSVKHVASELGYHDTYYFSRLFKKNIGMAPAIYRK 287 >UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU Length = 267 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 97/263 (36%), Gaps = 13/263 (4%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE- 103 + P P + +++ Y + G G+ + N + + + P + Y + Sbjct: 1 MQECKPNYSYGPAVRPNYLLHYCLSGQGEYHVNN-QVYQIKAGDAFLIMPNVVTYYQADQ 59 Query: 104 GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV--AF 161 W W+ F + +N ++ + E+ E + A F Sbjct: 60 HEPWTYLWISFDGSKTRQYLKRCNLDEHNLVVHCDYINELRETTIAILAHNKLSYSNELF 119 Query: 162 LTKIIYQWICLM-------YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 + +Y + + Y D ++K I + + Q+ +V ++A + + Sbjct: 120 IQGQLYTFFSFLAKSANITYNDNVAPNYNPYVDKAIEYIQNNYQEMVTVNEIADYLSLNR 179 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 ++L LF ++ +P+E+ L R+ A LL ++ ++A + + + FSKAF + Sbjct: 180 SYLTTLFKKHLHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKAFSNS 239 Query: 275 FGYAPSAVLKNTDQHPTDASPHN 297 AP K D S N Sbjct: 240 HQMAPRDYRKQFK--LVDNSRMN 260 >UniRef50_A1U2J4 Transcriptional regulator, AraC family n=3 Tax=Marinobacter RepID=A1U2J4_MARAV Length = 306 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 108/279 (38%), Gaps = 11/279 (3%) Query: 16 YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75 Y IP I + ++ + A HYR + ++ + +Y G + Sbjct: 31 YVIPEPIVRQLAHHPLTREL--YPLAFGHYRRAAGHHMHREHHRDN-LLIYCTDGKAFLN 87 Query: 76 LKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP----VGQQSVI 130 + GE T+ ++ L H Y + W +W+ +T D + I Sbjct: 88 VA-GEPYTVTAGDLLLLPAGVSHRYTADPDNPWTIHWVHYTGPLAEDFGQYMGFDDSTRI 146 Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ--IEK 188 + + L + L++ + + + + Q + + + + Q RQ ++ Sbjct: 147 RHLGRQPRLLVDFNGLLSVRQTGFRARGLIHASNRLRQLLAAVPINADETSQARQAELDS 206 Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 L + + L++R ++ +A S A + TG +P +++L +++ A LL Sbjct: 207 LHSFMREHLEERLTLNQLAELSGLSPAHFATRYREQTGTSPIQHFLHLKVERACELLDTT 266 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 S +++ L + D+++FS+ FK G +P+ Sbjct: 267 SQSFADISRQLGYDDAYYFSRLFKKVMGKSPTDYRHTAR 305 >UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VUW2_DYAFD Length = 300 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 115/293 (39%), Gaps = 13/293 (4%) Query: 2 NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61 N + E ++P I ++V +L ++ T+ ++ +++ Sbjct: 3 NVFRRRDGFDGEKLISLPPGILKDVAQRNPALFQIYITHI-GYFPKALFHYRERRKGCED 61 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP-MDIHSYHCE-GLVWEQYWMEFTPTSM 119 + +Y +QG G ++ + ++ + N I L Y + W YW+ FT + Sbjct: 62 NILIYCIQGKGHYVIGD-KKFEVSANQFILLPATDQYIRYWADHDDPWTIYWVHFTGAGI 120 Query: 120 MDIPVGQQSVIYNGEI---YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + Q G + +N++ ++ I + +L + + M+ Sbjct: 121 DNFNQSLQIAPQKGPVDILFNEKTLDIWHRIYQSLEMGYSLENLANATMCLHYFTAMFLF 180 Query: 177 GKKD------PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 +K + I + I + +L Q+ SV DMA S + LF + TG P Sbjct: 181 PEKHLTTEGTEKTDLITETITHMRLNLDQKLSVEDMARQHQLSCSHFSMLFRKGTGMAPV 240 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 +Y++ ++ A L+ + E+A +L + D F+FS+ FK G +P Sbjct: 241 DYFIHLKMQKACQLIYANEGKIKEIAMSLGYDDPFYFSRVFKKNMGQSPEQYK 293 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 97/260 (37%), Gaps = 14/260 (5%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE----QITLHGNCIIFLKPMDI 97 + P P N ++ Y + G G ++ + + + + P + Sbjct: 21 QYGWEQCEPLHSYGPYARNHYLFHYVISGAGTLMSTDSKGMTNTYHIKSGEGFLIHPKQV 80 Query: 98 HSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156 ++Y + WE W+EF + + + N ++ EL I N+ Sbjct: 81 NTYSADRDHPWEYTWLEFDGLRVKEALELAGLTMDNPVYHSNARDLSLELKNEMLYIANH 140 Query: 157 LAVA--FLTKIIYQWICLMYADGKKDP-------QRRQIEKLIATLHASLQQRWSVADMA 207 + L +Y ++ + Q I + + + + Q SV D+A Sbjct: 141 SDQSPFHLIGHLYLFLDYLTRSSSSRRMMRGGKLQDFYIREATSFIEQNFQNDISVEDIA 200 Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267 A + ++ ++F GK+P+E+ + R+ A LLK ++ ++ + + + HF Sbjct: 201 AFCNLNRSYFGKIFRDAVGKSPQEFLISYRMTKAAELLKLTELTIKDIGNAVGYPSQLHF 260 Query: 268 SKAFKHKFGYAPSAVLKNTD 287 S+AFK +G +P Sbjct: 261 SRAFKKTYGISPREWRSENK 280 >UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969580 Length = 304 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 109/267 (40%), Gaps = 11/267 (4%) Query: 28 SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGN 87 + G LI Y + + +K I N + +Y + G G + N +++ +H Sbjct: 25 TVGHQLIKPNSVYPSASHPFHYLFSPEKGRILNEYQLIYILDGKGTFVSMNKKKMQIHSG 84 Query: 88 CIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDI----PVGQQSVIYNGEIYNQELTE 142 +I L P + HSY + W +YW+ F + + + + I+N + + + Sbjct: 85 HMILLFPGEWHSYKPDKETGWYEYWIGFNGQDIEKLVEVDFFRKDNPIFNIGLNENVI-Q 143 Query: 143 VAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP-----QRRQIEKLIATLHASL 197 + + + + L I++ + Y++ K++ QI + + Sbjct: 144 LYKQAANVAQEQTTGFQQILAGIVHLLLGYTYSEHKQNSFINMNVLDQINTAKHLIAENY 203 Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257 + + D+A I S + R++F +YTG +P Y + RL + LL + E+A Sbjct: 204 KTEITPKDIATKINMSYSCFRKVFKQYTGFSPSRYKEELRLQTSKELLANTTMTSQEIAF 263 Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLK 284 + F ++F FK + GY+P Sbjct: 264 EVGFDTPYYFCILFKKRTGYSPLEYRN 290 >UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQR6_BACS4 Length = 302 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 101/267 (37%), Gaps = 14/267 (5%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 P P+ N ++ Y ++G G + +G+ + N + P +I Y Sbjct: 29 CGLEECDPYHSYGPISRNEYLLHYVIKGKGILK-ADGKTYHIGENDAFLIYPSEITYYEA 87 Query: 103 E-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 + W W+ F +++ + E + + ++++ + +N Sbjct: 88 DKDDPWTYIWIGFDGMKAESCLINASFSKENRVSKFECGETLVHYLNGMLSASKLTYSND 147 Query: 158 AV--AFLTKIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAAT 209 +L + I + P+ +E + + + +++ V D+A Sbjct: 148 LKREGYLYMFLSALIQEKTDNNSDKPEVYDYPFLVYVEHALDFISHNYEKQIKVIDIAEY 207 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 I + ++L +F + +P+EY + RLD A +LLK V E+A + + ++ FSK Sbjct: 208 IGINRSYLTTIFKKSLKVSPQEYLVKYRLDKACTLLKNTDLLVNEIARNVGYNNALTFSK 267 Query: 270 AFKHKFGYAPSAVLKNTDQHPTDASPH 296 FK+ + +P + H Sbjct: 268 VFKNYYKMSPKTYRTQHQELVYSNKKH 294 >UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWJ7_9GAMM Length = 293 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 108/293 (36%), Gaps = 17/293 (5%) Query: 5 LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64 L + V+ TP + + + ++ ++ + A +R+ R + + Sbjct: 9 LPHAGVRFITPTFMLEKLARHPLTKDCYPTAMGYYPAASGHRMQRERH-------DDNLL 61 Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----M 119 +Y G G++ + + + I+ L H+Y + W YW+ F S M Sbjct: 62 LYCTSGRGQLTVGDWHS-QVTAGHIMLLPQGLAHTYEADGDDPWTLYWVHFQGASTRVFM 120 Query: 120 MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA----VAFLTKIIYQWICLMYA 175 + + + N + + L+ + A L +I Q + A Sbjct: 121 QYLGYREDRPLTNAGVSPLLIGAFTNLLEVRRTGYSTRAFINASNHLRHLITQMSMEISA 180 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 + +++ + A + + Q ++ +A S+ + TG P +++L+ Sbjct: 181 HAGRLQSGFELDHVQAYMLEHIDQTITLDALAQVANMSKYHFSNRYKTLTGYPPIKHFLN 240 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 +++ A LL V E+A + + D +FS+ F G +P +T + Sbjct: 241 MKMEHACHLLDSTDMGVSEIARGVGYDDPLYFSRLFSRTVGSSPRGYRSSTRK 293 >UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n=2 Tax=Oceanospirillaceae RepID=Q2BQ54_9GAMM Length = 304 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 119/296 (40%), Gaps = 21/296 (7%) Query: 2 NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61 N L ++ P + + + +S G+ + + Y + + + Sbjct: 6 NWPLPPESIRFVIPRRVISELALHPLSQGLYPLGM-------GYYRQASGHQMERQEHDD 58 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMM 120 + +Y + G G+ ++ +G++ + I+ + H+Y W YW+ F Sbjct: 59 NLLIYCLDGEGEAVI-DGQKTRIRSGDILLIPKGVSHTYQARKRKPWTIYWVHFHGHHAE 117 Query: 121 DIPVG-------QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM 173 D Q+ + I+++ ++ L+ + E+ N A + Q + + Sbjct: 118 DFAQHLQQRESNQRRYVMPIGIHSRLASDFEALLEARESTYNLNAYICAANQLRQILSHI 177 Query: 174 -----YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 A K+ IE++ + + + ++ + +A +I S+ + + TG T Sbjct: 178 ALLQPLAKQKQSRGGLDIERVHSLMQTHIHEQLDLDTLAESISLSKYHFVKKYKEVTGTT 237 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 P +++ +++ A LL N + EVA + + D+++FS+ FK G +PS K Sbjct: 238 PINHFIQLKIERACHLLDTTNNGINEVAFAVGYEDAYYFSRIFKKLMGVSPSQYRK 293 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 99/279 (35%), Gaps = 18/279 (6%) Query: 20 LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKI-LLKN 78 + N+ S + I P P + ++++ Y + G G + Sbjct: 6 FYVFHNISSVDLYPIQFGK-------EKCDPWHHYGPTLTHNYLFHYILSGRGSFLENER 58 Query: 79 GEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIY-- 131 E I L + P + SY + W W+EF + + ++I+ Sbjct: 59 HEAIQLGPGQGFLMPPNTVCSYTADQDDPWTYCWIEFNGLKAANFMRQAGLNANNLIFTP 118 Query: 132 NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP---QRRQIEK 188 + + + + E I + + +A L ++ I ++ P I + Sbjct: 119 HKPMIISSIKDTLETIIRNHSQHESFLIAQLYLLVDHLIRFSKHSPQQRPNEIHSFYIRE 178 Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 I + SV +A + + RLF + TP ++ L R++ + LL Sbjct: 179 AIHYIQDHYMDNPSVDQLADICHLNRNYFTRLFKQELHMTPSQFILTYRINQSCELLAST 238 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 S+ ++AD + + + F+FS AFK G P + Sbjct: 239 NRSIRDIADQIGYSNQFNFSSAFKRVKGMTPMEWRRRYR 277 >UniRef50_A4XS27 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XS27_PSEMY Length = 293 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 109/292 (37%), Gaps = 14/292 (4%) Query: 2 NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61 N L + TP + L+ + +SSG +++ + + L + Sbjct: 9 NWPLPLGGQRFITPPRLRRLLVRHPLSSGCYPLAMGFYPDAAG-------HQMRRLQPDD 61 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM 120 + +Y G G + +G + ++ L H+Y +G W YW+ F + Sbjct: 62 HLLIYCRSGRGWLDATDGR-FEVAAGDLLLLPKDVPHAYGADGHSPWTIYWVHFDGSLSE 120 Query: 121 DIP-VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL----AVAFLTKIIYQWICLMYA 175 D + + + + L + L+ N L A L ++ L Sbjct: 121 DFLRLLGAQTLRRIGVQPRLLGDFEALLGLQRQGLNALPFIHAAHRLQAMLSSLAVLPAR 180 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 K + IE + A + A L ++ ++AA S + + TG P + ++ Sbjct: 181 VSLKSGRVLDIEAVQAVMRAHLHGNLNLDELAAQFKLSRFHFAKTYRALTGHAPIQDFIQ 240 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 ++ LA LL + V +VA+ L + D ++FS+ F+ G APS Sbjct: 241 LKMALACRLLDRGDIEVRQVAEQLGYEDPYYFSRLFRKVVGMAPSHYRALHQ 292 >UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n=2 Tax=Bacteria RepID=B5JKR3_9BACT Length = 301 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 110/297 (37%), Gaps = 12/297 (4%) Query: 8 SDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYT 67 ++T +P+ + + HY K+ + + +Y Sbjct: 6 EGFPSQTLVRMPVETVSCLQQLPFCRSL--YAADIGHYPEARNHLVKRDQGCPNHILIYC 63 Query: 68 VQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPV-- 124 + G G L ++I + I + H+Y EG W YW+ F+ T + Sbjct: 64 IGGQGWYSLNGEKRIPVQAGQAILIPAKSPHAYGSTEGQSWRLYWIHFSGTEADGLFNFL 123 Query: 125 --GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ 182 + + + + +T + I + + + + + ++ + + Sbjct: 124 SDERTNALIYLPHHASIITAFEDAIRWTQREHSKSVLHAFAGSCSRLLGIIAEGKRPNSS 183 Query: 183 R-----RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 R ++ I + +L+ S+ +A+ S LF + T +P + Y R Sbjct: 184 RARFVEERVRSTITRMRETLRSPLSLEQLASEACLSVPHYSALFKKQTSSSPIQMYSQMR 243 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294 + LA LL + EVA+T + D+++FS+AFK G PSA + D+ D S Sbjct: 244 IQLACELLHNTDLGIKEVAETAGYEDAYYFSRAFKKVMGCPPSAYRNSLDKRQRDPS 300 >UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1C2_HALOH Length = 276 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 96/258 (37%), Gaps = 12/258 (4%) Query: 40 YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99 P P + + ++ + G G + L + P + Sbjct: 20 IYQCGQEKCKPGHSYGPAVRDHYLIHFIYNGRGIFQVGEN-TYHLEAGQGFLICPDIVTY 78 Query: 100 YHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE---LTEVAELITSPEAIKN 155 Y + WE W+ F D + N + + L + E +T+ +K Sbjct: 79 YQADRHNPWEYAWIGFHGLKAKDYLNRANLSLANPVFSDTDGSPLRFIFEEMTAARKLKR 138 Query: 156 NL---AVAFLTKIIYQWICLMYADGK--KDPQRRQIEKLIATLHASLQQRWSVADMAATI 210 + + + + I L + + + I+K I + + + V D+A + Sbjct: 139 SREIKLIGLIYVFLSHLIELNVSGSTPDNNSKENYIKKAIEYIEKNYSRHIKVIDIANHV 198 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ--GNSVGEVADTLNFFDSFHFS 268 ++L +F + +P++Y ++ R++ A L+K + S+G+++ ++ + D FS Sbjct: 199 GLDRSYLWSIFNEFLNTSPQQYLINYRINKACELMKNRNLNLSIGDISRSVGYKDPLTFS 258 Query: 269 KAFKHKFGYAPSAVLKNT 286 K FK G +P K + Sbjct: 259 KTFKKTKGISPLHYQKQS 276 >UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BFD5_9FIRM Length = 305 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 98/257 (38%), Gaps = 14/257 (5%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 + P P +++ Y ++G G + + L ++P + Y Sbjct: 22 CGFAECKPLHSYGPAARPNYILHYVMKGKGIYQVGE-TKYPLKEGQAFLIEPESLTFYQA 80 Query: 103 EG-LVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 + W W+ F T D+ + + + E + V E++ + NL Sbjct: 81 DKTDPWSYLWVGFGGTEAQRFVRDLGLNSRQLTCECEYGEELKEIVFEMLHHTCSTAENL 140 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATIP 211 +L +YQ+ ++ + +++ IA + Q+ +V D+A + Sbjct: 141 Y--YLQGKLYQFFSVLARGIEIQQYSNDTKESIHVQEAIAYIKNYYSQKITVEDIANYLA 198 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 + ++L +F+ G +PKE+ + R+ L SV E+A + + +S F K F Sbjct: 199 LNRSYLYTIFMNSLGISPKEFLTEFRISRGKEQLALTDLSVEEIAVSCGYRNSLAFGKVF 258 Query: 272 KHKFGYAPSAVLKNTDQ 288 K K G P+ + + Sbjct: 259 KQKMGMTPTQYRNDNRK 275 >UniRef50_C6XV52 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XV52_PEDHD Length = 298 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 114/300 (38%), Gaps = 17/300 (5%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 MN + + +P + V + LI + A +Y D+++ + Sbjct: 5 MNVRKIKEGFLGQQMIVLPPDTKKVVTKNP--LIRGLYLTAIGYYPKAIHHDRERKTGSQ 62 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPTSM 119 ++ +Y +G G + + ++ L N I + H Y E W YW+ FT Sbjct: 63 QYIFLYCTEGRGYVEIL-KQRFELVPNTYIIIPKNIAHHYCTSESDPWTIYWIHFTGEHA 121 Query: 120 MDIP-------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL 172 + + I E ++ + L+ + + +N + Q++ Sbjct: 122 DQLYSRYAKDTAPEVQTIAYDEQRTEQFNLMLSLLENNYSTRNIELTNI---KLLQFLSS 178 Query: 173 MYADGKKDPQRRQIEKL---IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229 + P ++++ I + +L + +++ ++AA S + LF + TG +P Sbjct: 179 FIYHEEMYPSHYSVDQVSISIKFMKENLTKCYAIQELAAHSNYSVSHYSDLFKKKTGCSP 238 Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 +Y+ ++ + L ++ E+ + F D ++FS+ FK G +P+ + Sbjct: 239 MQYFNQLKIQKSCQYLYFTDMNIKEICVKIGFDDPYYFSRMFKKLMGSSPANYRNIYKKK 298 >UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XZD9_PEDHD Length = 294 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 116/274 (42%), Gaps = 10/274 (3%) Query: 25 NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84 +V+++G + IS Y + + K I + + +Y +G G + +Q+ + Sbjct: 20 HVLNAGYNRISKAANYPPAGHPSGHYFNWDKGRILDEYQLIYISKGTGIFESAHCKQLHI 79 Query: 85 HGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGEI---YNQEL 140 + +I L P + H + + W++YW+ F + +I + + + +L Sbjct: 80 NEGAVILLFPGEWHRFKPDPETGWDEYWVGFKGDIISNIAKKNFISPHLPLLQVGLSDQL 139 Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD------GKKDPQRRQIEKLIATLH 194 ++ I + ++ +I + +YA K+D I K L Sbjct: 140 IDLFSAILEKTKTEQPGYQPLISGMILHLLGEVYAKTKLQALEKEDISEILINKARILLR 199 Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254 S+ ++ +A + S +W R+ F +TG P +Y L +++ A +LL + E Sbjct: 200 ESVHTNIAIEKLAEELHVSYSWFRKAFKTFTGIAPHQYLLQLKIEKAKTLLSDSTKPIKE 259 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 +A L F SF+FS+ FK+K YAP K + Sbjct: 260 IAFELGFESSFYFSRIFKNKTSYAPDTYRKLVRK 293 >UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=Q0SVP8_CLOPS Length = 284 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 99/255 (38%), Gaps = 15/255 (5%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 P P + N+++ Y + G G + NG+ L N + P + Y Sbjct: 30 CGMEKCLPSHSYGPAVRNNYLIHYIIDGEGTYYV-NGQSYRLRKNQGFLICPNTLTYYKA 88 Query: 103 EGL-VWEQYWMEFTPTSMMDIP----VGQQSVIYNG------EIYNQELTEVAELITSPE 151 W W+ F + + ++I+ EIY + E+ + S E Sbjct: 89 SKDNPWTYMWIAFNGIKAKKYLNYANLNEDNLIFEYTEDDSLEIYINRMFELNRMNYSNE 148 Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQR-WSVADMAATI 210 L FL+K+ + + +EK I + + + D+A + Sbjct: 149 LEIQGLLYLFLSKLAMS--KNENSLKSNNISDFYVEKAIEFMQNNYLNPDLKITDVANFV 206 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 + ++L LF + +P+E+ L+ R++ A SLLK SVG ++ ++ + D FSK Sbjct: 207 GLNRSYLTHLFKKSLKLSPQEFLLNYRINEATSLLKNTNLSVGTISKSIGYNDQLTFSKV 266 Query: 271 FKHKFGYAPSAVLKN 285 FK G +P N Sbjct: 267 FKKVKGISPKTYRDN 281 >UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVH4_PAESJ Length = 287 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 107/261 (40%), Gaps = 16/261 (6%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-G 104 P ++ P + + ++ ++G G+ G+ L ++P + SY Sbjct: 28 SQTKPSHQRGPKVYDFYLMHTVLEGKGEFTCG-GKSYPLQAGDTFLIEPEALVSYISNAD 86 Query: 105 LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTE-------VAELITSPEAIKNNL 157 W W+ F ++ + N + + + + + Sbjct: 87 EPWLYRWVAFNGPQAAELAQAAGFSVANPVAETAAIRRVGVLYNHIFSIFRKNDPAAHLK 146 Query: 158 AVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLHASLQQRWSVADMAATIP 211 A +L ++ ++ + D + I+++I L Q S+ MA + Sbjct: 147 AAGYLQLLLAEFCTVHKLSEDNAAMTNMDDTDKLIQQMIHYLSTQYAQPVSIEQMAESFG 206 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG-NSVGEVADTLNFFDSFHFSKA 270 + A+L R+F RYTG++P + L R+D A +++++ ++ ++A ++ DS +FSK Sbjct: 207 YNRAYLSRVFKRYTGESPITFLLKLRIDKARQMIREREGLTIEQIAASVGLQDSLYFSKQ 266 Query: 271 FKHKFGYAPSAVLKNTDQHPT 291 F+ +G +PSA ++ Q T Sbjct: 267 FRRFYGLSPSAYRESMRQMKT 287 >UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C7N6_9BACE Length = 292 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 122/295 (41%), Gaps = 21/295 (7%) Query: 7 SSDVKNE----TPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW 62 + K E TPYNI L EN I+ + + + + Y +++ N Sbjct: 5 AEGFKGEKAIVTPYNIRNLQRENNITKQLFVSHIGY------YPHAENHFREREKGTNEN 58 Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPT--SM 119 V +Y GCG + K GE+ L N L + H+Y + W YW+ F +M Sbjct: 59 VFIYCESGCGWVSYK-GEKYILTKNQAFILPANEQHAYGADEVNPWSIYWLHFCGEGVAM 117 Query: 120 MDIPVGQQSVIYNGE--IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM---- 173 +G+ + + Y+ E+ + E + + +++ + ++ + Sbjct: 118 FSSIIGKAISLEESDKSRYDDRFQLFEEMYQNLEMGYSPENLEYVSFCLMHFLASLKYIN 177 Query: 174 -YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232 + + KK + I+K I+ + +++ + ++ D+A + S + LF T P EY Sbjct: 178 QFREIKKVRETDFIQKSISFMKENMENKITLEDIAQHVGYSASHFSALFSERTSYAPMEY 237 Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 Y ++ A S L+ + E+A L ++D FHFSKAF + P + Sbjct: 238 YNQLKIQRACSFLQFSDLKIKEIAFRLGYYDQFHFSKAFNKEMEITPKEYRRRYK 292 >UniRef50_C6IJ00 Transcriptional regulator n=2 Tax=Bacteroides RepID=C6IJ00_9BACE Length = 293 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 109/274 (39%), Gaps = 9/274 (3%) Query: 23 NENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82 + N+ S G I +Y ++ + + K I + +Y +G G + ++G Sbjct: 18 DRNISSVGFEEIPPNTSYPTLNHSAGYYFNPDKGRILTEYQLIYITEGEGVLETRSGGVF 77 Query: 83 TLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYN 137 T+ I L P + H+Y+ W YW+ F + + ++S ++ I + Sbjct: 78 TIKRGMIFVLFPGEWHTYYPNYQTGWSHYWIGFCGPEVDSWMTNEYCSKESPVFKVGIND 137 Query: 138 QELTEVAELIT--SPEAIKNNLAVAFLTKIIYQWICLMYAD--GKKDPQRRQIEKLIATL 193 + ++ + I + E ++ L + +C + + + D +I+ + Sbjct: 138 EIVSLFRKAIDVANEEPTLYQRVLSGLVTYLVALMCSIDKNLQVENDDFSSKIDYACVLM 197 Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253 + Q S+ ++A + R+LF P +Y+ + ++ A+ LL V Sbjct: 198 KELIDQPVSMQEIAKKAGMGYSLFRKLFKEQKNYAPVQYFQNLKIQKAIELLTTTTIPVK 257 Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 E+A L+F +FS FK + G +P + Sbjct: 258 EIAYRLDFESPAYFSARFKKQTGKSPIEYREEFR 291 >UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FA9_PEDPA Length = 298 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 119/295 (40%), Gaps = 17/295 (5%) Query: 9 DVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTV 68 +NE + +P +I N + +I L + Y + W+ ++ Sbjct: 6 GFENEYLFVLPPVILNNF--NFSKVIKLLYITDLGFYPKARYHFVHRDRGTEEWILIFCT 63 Query: 69 QGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDI----- 122 G G + E+ + I+ L P H+Y+ + W+ +W F S+ + Sbjct: 64 HGKGVVKSAT-EEWLIESGSIVLLPPGKEHTYYAFDDDPWDIFWAHFNGDSVNEYIPQEA 122 Query: 123 PVGQQSVIYN---GEIYNQELTEVAELITSPEAIKNNLAVAFLTKII-----YQWICLMY 174 G ++ N E +++ ++I + A + +V + ++++ Y + + Sbjct: 123 LQGNGFLVINKTSTEDMQMLMSQFWQMIQALSAGFSYQSVFYSSQVLGATLAYVSLQSVL 182 Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 I K + ++ +++ S++ + + S+++L R+F + G + ++ L Sbjct: 183 PHDSYTMGNEYITKAVKYIYDHFEEKVSLSTLTEVLDVSKSYLSRIFRQTVGTSVNQFIL 242 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 D ++ A LK +V ++A L + D ++FS+ FK G +P K Sbjct: 243 DIKMKQACYYLKDTNLAVHQIASRLGYDDPYYFSRIFKKVVGSSPRVFRKQEKNR 297 >UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IHE3_CLOBU Length = 285 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 105/254 (41%), Gaps = 12/254 (4%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101 P P I + ++ Y ++G G L+ NG+ LH N + P DI Y Sbjct: 24 QCGREECTPSHSFGPAIRDHFLIHYIIEGSGTFLV-NGKLYKLHKNQGFIIFPDDITYYE 82 Query: 102 CEGL-VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIK-- 154 + W W+ F + +++ I+ ++ L E + + +K Sbjct: 83 ADNHTPWIYKWVGFKGIKAEYYLQCAGLTKENPIFEYS-NDKFLEECFDNMIKASKLKYA 141 Query: 155 -NNLAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKLIATLHASLQQRWSVADMAATIP 211 L+ + + I L D D + I+K + + + ++ ++++AA + Sbjct: 142 SELKLQGLLSIFLSELIELSSIDSSSDYYYKDVYIKKCLNYIEMNYSRKLLISEIAALLG 201 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 + + +F G TP++Y + R++ A L+K S+ +++ ++ + DS FSK F Sbjct: 202 LNTKYFSLIFKESIGVTPQQYIISFRVNKACELMKNFKLSICDISRSVGYDDSLAFSKIF 261 Query: 272 KHKFGYAPSAVLKN 285 K + G +P + Sbjct: 262 KKQKGMSPKKYREQ 275 >UniRef50_C7PUR1 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PUR1_CHIPD Length = 301 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 110/292 (37%), Gaps = 12/292 (4%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 + + + +P I+ + ++ L+ T +Y K+P + + + Sbjct: 8 KREGFEGQQLIVVPRKISADFLTQDPITRQLYIT-DIGYYPKARYHYIKRPSGISQHIII 66 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTS----MM 120 Y ++G G I + + +++ + + + + H Y E W YW+ F + Sbjct: 67 YCIEGKGWIEI-DKKRVDVLPSQFVIIPANTPHKYLSEEQEPWTIYWIHFKGEISAYIVG 125 Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK-- 178 I ++ + + ++ + + + + ++ I ++ + + K Sbjct: 126 LILQRAKNFRLHLTYNENRIRLFEDICINLQKGYGDDNLRYVNMIFNHFLSSLLYEEKFN 185 Query: 179 ---KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 ++ ++ I + I + L Q ++ + + S + +F TG +P EY+ Sbjct: 186 HAGQEERQDIIGQTITMMQEKLDQLITLQEFSQYAGLSVSHFSAVFREKTGYSPIEYFNH 245 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 ++ A L +V E+A L D ++FS+ F G +PS Sbjct: 246 LKIQKACQYLLFSAATVKEIAVRLGVEDPYYFSRMFSKLMGMSPSEYRNRNK 297 >UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EEZ9_9SPHI Length = 306 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 114/269 (42%), Gaps = 9/269 (3%) Query: 25 NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84 N+++ G ++ Y D H+ ++ D K I + +Y +G G + + + Sbjct: 26 NILNVGHNIHPGKLKYPDPHHPNLYCFDWSKGRILEEYQLIYIAKGSGTFESEQVGSVVV 85 Query: 85 HGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM-----MDIPVGQQSVIYNG--EIY 136 H ++ L P H Y + WE+YW+ F + D +I+ G + Sbjct: 86 HPGTVLLLFPNIWHRYKPHDDEGWEEYWVGFNGSYASYLMQQDCFDPHAPLIHMGFNSEF 145 Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKII-YQWICLMYADGKKDPQRRQIEKLIATLHA 195 + + + L+ + T+++ + + + D + + I + +H Sbjct: 146 INVFIRLIDTLKFEGVAFAQLSSSLTTQLLGLVYASALQKEKVMDRKEQVINNIRYKIHE 205 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 +L ++ ++A+ S AW R+ F G +P +Y L+ +L+ A ++++ S+ E+ Sbjct: 206 NLSNCATLEELASQHNVSYAWFRKTFKEVVGVSPGQYQLNLKLEKAARMIRETQMSISEI 265 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 A F HFSK FK K G +PSA Sbjct: 266 AFVNGFVSEHHFSKIFKKKMGVSPSAYKH 294 >UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VZN4_DYAFD Length = 292 Score = 213 bits (542), Expect = 8e-54, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 9/270 (3%) Query: 25 NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84 + ++G S + Y +E + + I N + ++ +G G +N + Sbjct: 21 YLTTAGYSKVEPNQQYPNEPHPDSHKLTWNRGRILNDYYIIFITRGKGIFEAENLPPTEV 80 Query: 85 HGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSV-------IYNGEIY 136 FL P H Y + WE+YW+ F + + I + + Sbjct: 81 SAGQCFFLFPGVWHRYKPDVKSGWEEYWLGFNGYYIRQLMNNLNFHPARPFVDIKSNKEI 140 Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC-LMYADGKKDPQRRQIEKLIATLHA 195 L + + + + + +I+ + D DP R I K L Sbjct: 141 LVLLHRIFDRLKAANLGYHQQIAGITLQILGILNTISKFKDYDNDPVGRLIAKAEFILQE 200 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 S +++ V ++A+ +P + R+ F + TG +P +Y+L+ RL A LL ++ E+ Sbjct: 201 SYEKQVDVEELASQLPMGYSAFRKAFKKITGVSPNQYHLNLRLSRARDLLINTNLNISEI 260 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 F F+FSK FK K G +P A + Sbjct: 261 THQTGFESVFYFSKLFKKKNGLSPVAFRRR 290 >UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales RepID=A6LBM0_PARD8 Length = 295 Score = 213 bits (542), Expect = 8e-54, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 11/272 (4%) Query: 26 VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85 V + G I Y + + + I N + VY +G G ++ + ++ Sbjct: 25 VTTVGYQFIPPGCAYPLSRHPEKYNFKPQTGRILNEYQLVYITKGSGYFSSQSCKSQKIN 84 Query: 86 GNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQEL 140 +I L P + HSY+ + W++YW+ F + ++ ++ + + + Sbjct: 85 AGTMILLFPGEWHSYYPDRETGWDEYWVGFRGIHIDKRVEKKFFTKEEPLHRIGL-SATI 143 Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR-----RQIEKLIATLHA 195 + E I + + + ++ I+ + +Y K + +I + + Sbjct: 144 VGLYEDILKFASEEKSGYQQMISSIVLHILGSVYYKEKNNSFTNTYVVDKINEARILMKE 203 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 +++ S ++AA + +W RR+F YTG +P +Y L +L A LL ++ E+ Sbjct: 204 NIEDPLSPEEIAARLGLGYSWFRRMFKEYTGVSPAQYQLQQKLLRAKELLTSTPLTISEI 263 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 A +L+F ++ FS FK K G PS T Sbjct: 264 AYSLHFENAGQFSTFFKKKEGVTPSEFRDRTH 295 >UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1S5_CLOB8 Length = 286 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 99/259 (38%), Gaps = 17/259 (6%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILL------KNGEQITLHGNCIIFLKPMDIHS 99 P P + N ++ Y + G G++ + T+ L P I++ Sbjct: 25 ERCDPLHSFGPTVKNHFLFHYVLSGKGRLYSFNKGTQNDSSIYTIKAGEGFLLTPNIINT 84 Query: 100 YHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAE---LITSPE 151 Y + W W+EF + +I + +++I+ + YN + + + + + Sbjct: 85 YEADKDDPWNYVWVEFEGLKAQRYLEEIGLSSKNLIFTPKEYNNDDNSIKDNLMFLLNNP 144 Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR---QIEKLIATLHASLQQRWSVADMAA 208 + ++ + L Y + + K + + I + + SV ++A Sbjct: 145 SAPDSAILGHLYLFFYALLENSSFNNTKSASNLQEFYVREAINYIEKNYNNNISVENIAK 204 Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268 ++ ++F TP+E+ + RL A +LK S+ E+++ + + FHFS Sbjct: 205 WCNLDRSYFGKIFKNSMKTTPQEFLIKYRLSKACEMLKDNNISIREISELTGYPNQFHFS 264 Query: 269 KAFKHKFGYAPSAVLKNTD 287 ++FK + +P Sbjct: 265 RSFKEVYNMSPRQWRNQNK 283 >UniRef50_UPI0001C34C27 transcriptional regulator, AraC family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34C27 Length = 262 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 102/252 (40%), Gaps = 13/252 (5%) Query: 40 YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99 D + P P W+ Y +QG G G++ + + ++P ++ Sbjct: 17 PVDCGWEACAPGHSFGPAARFYWLLHYVIQGRGAF-TAEGKESPVRAGQMFVIRPFEVTY 75 Query: 100 YHCEG-LVWEQYWMEFT-PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 Y + WE W+ FT + + + + + N + + E + Sbjct: 76 YEADRREPWEYIWIGFTCGIPLPECLLQE--AVVNASRCGSIFSSMLEAENQTDG----- 128 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 FL +Q + + + K +E+ L A+ + S+ ++A + + ++ Sbjct: 129 RELFLCGKAFQLLAAL--EEKPAGGEDYVEQARTYLEANYMRDVSIGELAGKLNLNRSYF 186 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 LF + TGK+P++Y D R+ A L+ + G S G+ A + + D F FS+ FK FG Sbjct: 187 STLFRKKTGKSPQQYLTDYRMGRACQLMTEHGYSPGKAALSTGYPDIFSFSRMFKKHFGV 246 Query: 278 APSAV-LKNTDQ 288 P + T++ Sbjct: 247 FPREYSRRQTEK 258 >UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella oris F0302 RepID=D1QQ68_9BACT Length = 291 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 101/273 (36%), Gaps = 12/273 (4%) Query: 26 VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85 V + G I Y + + ++ I N + +Y G G + E+ + Sbjct: 20 VSTVGYEHIIPGEDYPTHGHADGYYFKVERGRILNEYQLLYITAGEGVFKSSSVEERRIK 79 Query: 86 GNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQEL 140 L P + H+YH W+ YW+ F +M + + +Y+ Y L Sbjct: 80 AGDFFLLFPGEWHTYHPSKNIGWQSYWIGFKGENMDARVKNGFLSPTKPVYHVG-YMDRL 138 Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY------ADGKKDPQRRQIEKLIATLH 194 ++ + L ++ I +MY GK + + + Sbjct: 139 EDLYHYALDTAQEEAVHTQRTLAGVVNLLIGMMYSLERNIELGKNQEHVNMVNRARKRIR 198 Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254 +L++ ++ +A + S + R+LF +TG +P Y + RL A LL SV + Sbjct: 199 EALEENLTIQQIATDMGVSYSNFRKLFKEFTGVSPALYQQELRLQRAKELLSTTNLSVKQ 258 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +A L F +FS FK K PS + T Sbjct: 259 IAYKLCFDSPDYFSAKFKAKINLRPSEFREQTK 291 >UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GEN0_LACF3 Length = 278 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 15/255 (5%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 P K P + ++ Y + G G + N LH + P +Y + Sbjct: 23 GRSETMPGHKYGPAVRPYYLIHYILSGSGIFKVDNV-TYHLHAGQGFLIVPNCRTTYIAD 81 Query: 104 GL-VWEQYWMEFTPTSM----MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158 W W+ FT S I + + ++N + V E++ N Sbjct: 82 KETPWSYVWLGFTGKSAATWIDQINISEIRPVFNSNKSYELANCVNEILALDNLSMENNL 141 Query: 159 VAFLTKIIYQWICLMYA------DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 A ++++ + + + + I + L + +V +A + Sbjct: 142 RAL--SCFFRFLSYIATGTVINIQQANSEKNHYVTQAIQYISHHLSK-VTVESLAHAVNL 198 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 + ++L LF TP EY + R+ A LL+ S+ +VA+ + + F++ FK Sbjct: 199 NRSYLTSLFKHDLDLTPSEYIQNFRITKARHLLESSDISIDQVAEQCGYQRTNSFTRVFK 258 Query: 273 HKFGYAPSAVLKNTD 287 +G +P + T Sbjct: 259 RTYGISPRQYRQETK 273 >UniRef50_P28809 MmsAB operon regulatory protein n=6 Tax=Pseudomonas aeruginosa RepID=MMSR_PSEAE Length = 307 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 109/296 (36%), Gaps = 14/296 (4%) Query: 5 LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64 L + ++ P + + + +S + + + HYR + + + Sbjct: 19 LPADSLRLPIPAALLEKLAVHPLSRDL------YPTSLGHYRRARD-HRMSRERHDEHLL 71 Query: 65 VYTVQGCGKILLKNGE---QITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMM 120 +Y +G G + ++ GE + + +++L P H Y + W +W S Sbjct: 72 IYCSEGQGLLRVREGEAWREYRVGSGDLLWLPPGMAHDYAADDRQPWTIFWTHLRGDSAT 131 Query: 121 DIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177 + + + + + + + L +L+ + + +C + Sbjct: 132 WLQHSAGYRDTPLRHWGLQHALLGGFEQLLEVRHSGYRFQHFLLAASRLRSLLCQLPLLR 191 Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 ++ L A + L R + +AA S+ + TG+TP +++L + Sbjct: 192 PLREGSLDLDGLHAYMREHLHARLELERLAAFCNLSKFHFVSRYKAITGRTPIQHFLHLK 251 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDA 293 ++ A LL SV V + + DS++FS+ F G +PSA + Q A Sbjct: 252 IEYACQLLDSSDQSVARVGQAVGYDDSYYFSRLFSKVMGLSPSAYRQRVRQGEGGA 307 >UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P929_9FIRM Length = 279 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 90/250 (36%), Gaps = 9/250 (3%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104 + P P + + ++ + + G G +G + + P + +Y + Sbjct: 28 QRCEPLYAWGPGLRDHFLVHHVIVGRGVYT-ADGVTHDVKAGDTFIIYPSVVVTYSADAA 86 Query: 105 LVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSP--EAIKNNLA 158 WE W+ F P +Q + E ++ +A++ + A Sbjct: 87 DPWEYCWVGFNGAEARLMIAQTPFTRQRPVVRFEQPDEIREAIADIYRASGTTRSSELRA 146 Query: 159 VAFLTKIIYQWICLMYADGKKDP-QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 + L + I A +E I + + + +AA++ S + L Sbjct: 147 IGMLYIFLALLIEQAGAPAPAAGLSLEYVESAIRFIAHNYSGHIDIEAVAASVGISRSHL 206 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 R+F+++ P EY R+ A LL V VA ++ + D +FS+ FK G Sbjct: 207 YRVFMQHISTPPNEYLAKFRISQACELLGHSSLPVSAVAASVGYDDPLYFSRVFKRITGM 266 Query: 278 APSAVLKNTD 287 PSA +K Sbjct: 267 PPSAYIKAHQ 276 >UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptococcus RepID=C5VY46_STRSE Length = 278 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 94/262 (35%), Gaps = 13/262 (4%) Query: 38 HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL-LKNGEQITLHGNCIIFLKPMD 96 P P + ++ Y + G G + + L + P Sbjct: 18 FYPIQFGMEACKPLHSFGPTMKQHYLFHYIISGSGTFYDTSDQREYHLTAGQGFLISPDA 77 Query: 97 IHSYHCE-GLVWEQYWMEFTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAE 145 I SY + W W+EF P+ Q + E+ ++ Sbjct: 78 ICSYEADEKDPWTYIWLEFDGLKTEHFLRQAGLSKEQPIFSQREMPTSSPVYHEMKQILA 137 Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVAD 205 L A+ F++ +I + + ++ + I + I + + ++ SV D Sbjct: 138 LHHQKSALVLGHLYLFISCLIDCSLTKTSSKHDENKE-FYIREAINFVERNYEKAISVDD 196 Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265 +A + + RLF +P+++ + RL A LLK ++ E+A+ + + + F Sbjct: 197 LAQVCNLNRHYFSRLFKEQMNISPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSNQF 256 Query: 266 HFSKAFKHKFGYAPSAVLKNTD 287 +FS AFK + +P+ K Sbjct: 257 NFSTAFKRHYQISPNRWRKIHK 278 >UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7P4_RUMGN Length = 253 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 100/254 (39%), Gaps = 14/254 (5%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104 + P P + N ++ ++G G E+ + + P + Y + Sbjct: 1 MQDCPPSYSFGPAVRNCYLLHLCLEGEGVFYSGE-ERYPIKQGQGFLIHPGKLTFYQADS 59 Query: 105 -LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159 W W+ + ++ I++ + + + +++ N Sbjct: 60 VNPWSYLWVGIGGHDAEKYLRLAGLSARNPIFSCTQIDTAKSYILDMMKHHALSAAN--E 117 Query: 160 AFLTKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 ++ I+ Q++ L+ D +++ I + I+ +H + Q +V ++A + + Sbjct: 118 IYIQGILMQFLALLVEDAGCTVSPQQNTSSVYINQAISYIHKNYQNPLTVQEIADYLSLN 177 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 ++L LFL+ +P+++ R+ + LL+ S+ +A + + SF FSKAF+ Sbjct: 178 RSYLTELFLKTVQLSPQQFLTRYRITKSEELLQSSSLSIQNIAYSCGYSSSFSFSKAFRK 237 Query: 274 KFGYAPSAVLKNTD 287 G +PS K Sbjct: 238 VNGLSPSEYRKQKR 251 >UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=Clostridium perfringens RepID=B1BNT9_CLOPE Length = 285 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 19/255 (7%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKN-----GEQITLHGNCIIFLKPMDIHSY 100 P P + N+++ Y + G GK + + + + P +I SY Sbjct: 25 EKCDPLHSVGPTVKNNYLFHYVISGKGKFFSVDPKTFEKKYYEVSPGEGFLICPNEICSY 84 Query: 101 HCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155 + W W+EF M + + + I+ + L + E+ + K Sbjct: 85 QSDENDPWHYMWIEFNGIKAKLYMEEAGLTPANPIFKLKESINSLKIIEEMKSIISNNKK 144 Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRR-------QIEKLIATLHASLQQRWSVADMAA 208 N +FL +Y +I + I + + + + + SV D++ Sbjct: 145 NP--SFLIGHLYLFINSLIEFSLNSTLNELDTLNELYIREALNFIEENYNRNISVEDVSN 202 Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268 S+++ R+F ++ TP+E+ + ++ A +LLK + S+ +VA+ L + + F+FS Sbjct: 203 RCNLSKSYFTRIFKKHMNTTPQEFLIQYKMLQACNLLKDKSLSISQVAELLGYSNQFNFS 262 Query: 269 KAFKHKFGYAPSAVL 283 AFK KF +PS Sbjct: 263 VAFKKKFNLSPSKWR 277 >UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bacteroides fragilis 3_1_12 RepID=UPI0001B4A5A3 Length = 302 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 118/292 (40%), Gaps = 13/292 (4%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 + N+ +P I + I G L +L + +Y + + + + + Sbjct: 13 KKEGFTNQRAIVLPEAIKK--ILVGNELTNLLYVTDIGYYPHATGHYRARRYGSQQHILI 70 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTS--MMDI 122 Y +G G + G++ + + ++ H Y E W YW+ FT + + Sbjct: 71 YCTEGEGWYSIH-GQRQKVCKDQFFIIEAGLPHIYAASENSPWSIYWLHFTGEKSHLFNS 129 Query: 123 PVGQQSVIYNGE--IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-----MYA 175 + I + E+ + E + + + T ++ +I + Sbjct: 130 FYNKLHKIDESPNARIKDRMQLFEEIYQNLEMGYSIENLEYTTLCLWHFIASFKFVSQFR 189 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 + + Q ++ I+ + +++++ S+ D+A ++ S + ++FL+ +G TP Y+ Sbjct: 190 EINRAKQGDVTQEAISYMRKNIEKKLSLDDIAGSVNYSSSHFGQVFLKKSGYTPLNYFNQ 249 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 ++ A LL + E+A+ L F+D +HFSK F + G PS+ K Sbjct: 250 LKIQKACQLLDFSDLKIKEIAEQLGFYDQYHFSKVFYKQIGETPSSYKKRNK 301 >UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36471 Length = 287 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 101/274 (36%), Gaps = 13/274 (4%) Query: 17 NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76 N+ + +N+ SL + P ++ + ++G G Sbjct: 4 NMIEIFRKNISGESSSLSFGY-----AGREQCMGSHSFGPARRAHYLIHFIIKGKGVF-F 57 Query: 77 KNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVG---QQSVIYN 132 + ++ L + ++P + Y+ + WE W+ F + I S + Sbjct: 58 ADDKKYILKQRDMFLIRPGETTFYYADEVDPWEYAWVAFVGSDAAQITESCGFAYSPVAT 117 Query: 133 GEIYNQELTEVAELITSPEAIK--NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLI 190 + + + ++I + + ++ L I Y ++ + + + + + + Sbjct: 118 YPDSPELIESIDDIIHHMQTGDENDYYLLSRLYNIFY-YLSKPVINTQNTYKNEIVRRTV 176 Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250 + +S ++ ++ +A + +L RLF G PKEY R+ +A +L Sbjct: 177 NLIRSSYFEKLTIQWLADQVRVDRTYLYRLFKEEVGICPKEYLTQYRIRMATVMLSTTNQ 236 Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 S+ E++ F D+ FS FK G+ P K Sbjct: 237 SIKEISYACGFTDTSLFSICFKKYLGFTPQQFRK 270 >UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales RepID=Q64XT7_BACFR Length = 318 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 110/294 (37%), Gaps = 18/294 (6%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 Q E +P I + + + + I + +Y + +++ + +V + Sbjct: 24 QKDGFLGEQALVLPPAIVQRMKTDPATSIL--YITDIGYYPKAYNHFRERDTPIDQYVFI 81 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPV 124 Y +G G L +G++ + N L H+Y + W YW+ F T Sbjct: 82 YCTEGRGWFSL-DGQKHPVVPNQYFILPAGLPHAYGADEKEPWTIYWIHFGGTLAPLYCT 140 Query: 125 GQQSVIYN-----GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM------ 173 + + + + E+ + + +++ + + + ++ + Sbjct: 141 HRTCRLTDIKPGMHSRISYRTELFEEIFRVLKMGYSLENLSYASSVFHHYLGSLRYLREY 200 Query: 174 ---YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 +++ + + + I + +L ++ ++A++A S ++ LFL+ TG P Sbjct: 201 REAFSEHRPAGEEDPVNAAIHYMKENLGKKLTLAELADYTGYSSSYFSNLFLKRTGYAPL 260 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 Y+ ++ A L V +V + D+++FS+ F G +P K Sbjct: 261 SYFNQIKIQKACQFLDFTDMKVNQVCYRVGIEDAYYFSRLFSQIMGMSPREYKK 314 >UniRef50_A4AC34 Transcriptional regulator, AraC family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4AC34_9GAMM Length = 292 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 101/282 (35%), Gaps = 16/282 (5%) Query: 14 TPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGK 73 TP + + ++ ++ G ++ + + + +G G Sbjct: 18 TPGFLLEALEKHPLTCGCYPTAMGFYPKACG-------HFMRREQHDDNLLFLCTEGRGF 70 Query: 74 ILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDI---PVGQQSV 129 + + G + ++ L HSY E W YW+ F + D + Sbjct: 71 VQTQRG-GFAVATGDMVLLPRDQEHSYAANEQDPWTLYWVHFKGSKAGDFIDHLLPDDDF 129 Query: 130 IYNGEIYNQELTEVAELITSPEAIKNN----LAVAFLTKIIYQWICLMYADGKKDPQRRQ 185 + + LT +++T + A L ++ ++ ++ R Sbjct: 130 RVHSGVEPSLLTGFEQMLTVGSTGYSLDAYIGAANRLRHLLAEFALCRDRQRSQNMGRLH 189 Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + +L + + + S+ ++AA + + TG +P ++L +++ A LL Sbjct: 190 LRELQSYMREHVSSSLSLGELAAFTGLTPQHFASRYKAETGYSPMRHFLHMKMEAACRLL 249 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +SV +A L + D +FS+ F+ G +PS ++ Sbjct: 250 DSTQHSVKTIAVMLGYVDPLYFSRMFRQTVGLSPSQYRESQR 291 >UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AB39_9PORP Length = 306 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 125/293 (42%), Gaps = 14/293 (4%) Query: 18 IPLLINENVISS-----GISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72 +P +EN+ G I +Y + + + + + + I + + VY V+G G Sbjct: 14 LPTNNDENIWGMSISGIGFQSIDPKGSYPLKGHPIGYTFNPDRGRIIDEFALVYIVKGEG 73 Query: 73 KILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP---VGQQS 128 N + + F+ P HSY + W++Y++ F + + + + Sbjct: 74 TFASINCFEKKISKGDAFFIFPGQWHSYQPIANIGWDEYYVTFQGDYFEKLLNGIINRAN 133 Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP----QRR 184 I++ + +Q + E++ A K+ A L I I L+Y+ K + Sbjct: 134 PIFHIGMNDQIVKHFGEMLDCARAQKSGF-QAVLAGITMHTIGLIYSINKNQDYGSVSMQ 192 Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +I++ + ++ +++ D+A +I S + R+ F +YTG P +Y L +L L Sbjct: 193 KIQEACVLMRENIYDKFTPEDIAESINMSYSNFRKSFKQYTGIAPHQYMLQLKLSKIKDL 252 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297 L S+ ++A LNF + +FS F+ K G P + K ++ A ++ Sbjct: 253 LSSTEMSIQDIAMKLNFESADYFSYFFRSKTGINPLSYRKEIEKQREKAKKNS 305 >UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS family) protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692C08 Length = 288 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 109/276 (39%), Gaps = 15/276 (5%) Query: 26 VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85 V S+ + + T P + P + + ++ + + G G + G+++ L Sbjct: 8 VASNSDPDSASYITVLFSGESQTRPGHQIGPRLCDYYLMHHVISGKGIFMY-RGKELELK 66 Query: 86 GNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSV-------IYNGEIYN 137 ++P ++ Y + W W+ F + + + + + Sbjct: 67 AGDTFLIEPEELVRYEADQVNPWMYRWVAFQGKGVPEALEKTGFSSSRCIVHTRDNQNVS 126 Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD-----GKKDPQRRQIEKLIAT 192 + + + ++ + + A+ +L + + +Y R ++K I Sbjct: 127 ELFSTILSVLQDKKEGAHQKALGYLYVLFGELCEAIYPKTGIGMRTSSESGRTVQKAIHY 186 Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ-GNS 251 L + S+ MA + + A+L R+F + TG TP + L R+D A LL+Q+ + Sbjct: 187 LSTQYAEDISIETMADNLGYNRAYLSRIFKQETGLTPVTFLLKLRIDKARFLLRQRMELT 246 Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 + ++A ++ F D +FSK FK + AP+ + Sbjct: 247 IEQIASSVGFHDPLYFSKQFKRFYKCAPTEYRDSIK 282 >UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium cellulovorans 743B RepID=C5RL17_CLOCL Length = 282 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 92/254 (36%), Gaps = 12/254 (4%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 P P + ++ Y G G + NG L + P DI +Y Sbjct: 24 CGKETCIPNHTWMPNLKERFLIHYIFSGKGSFEI-NGYTYNLESGQGFLISPGDIATYKA 82 Query: 103 EG-LVWEQYWMEFTP----TSMMDIPVGQQSVIYNG---EIYNQELTEVAELITSPEAIK 154 + W W+EF + I + ++ +++ ++ + + Sbjct: 83 DDKDPWTYAWVEFNGRLSEKFLHQIGLSSKTPVFSCKKKDLLEASFQYIFDACKKSRNNN 142 Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIP 211 + + + +K+ + I + + + + + +++MA + Sbjct: 143 LLILSSLYHFLAMIHEASAPEQTEKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLS 202 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 + ++ LF G TP+ Y ++ R+D A L+K ++GE++ + + D FS+ F Sbjct: 203 LNRNYMSTLFKESVGITPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMF 262 Query: 272 KHKFGYAPSAVLKN 285 K FG P + Sbjct: 263 KKLFGIPPKNYRNS 276 >UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales RepID=C7X929_9PORP Length = 296 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 104/294 (35%), Gaps = 15/294 (5%) Query: 4 KLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWV 63 K E ++P + + LI+ + + + +K + + Sbjct: 2 VKIKEGFKGERFVSLPEELLASYRREP--LINNLYVRKIGFFPRVKYHFLQKEHGCDYAM 59 Query: 64 AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDI 122 +Y +G G + G+Q T+ I + P +S+ + G W YW+ F Sbjct: 60 LIYCTEGKGWYRIL-GKQYTVEKYQYIIIPPGIPYSFGADEGDPWTIYWLHFQGKLCDQF 118 Query: 123 PVGQQSVIYNGE----IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178 + L E+ +S + + + +Y ++ + Sbjct: 119 LPSHPVPVTISPNEYSRLQDRLRLFEEIYSSFSMGYIKEYMIYSSMCLYNFLASFIYLEQ 178 Query: 179 -------KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 + ++I + ++QQ ++ ++A+ S + LF TG +P Sbjct: 179 FRHIMIPSQKEYPFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGETGVSPMN 238 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 Y++ ++ A ++ + E+A L F D+ +FS+ F G +PS K Sbjct: 239 YFIRLKIQKACEYIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRKK 292 >UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KND9_9FIRM Length = 298 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 91/258 (35%), Gaps = 10/258 (3%) Query: 39 TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98 + V P + P + + + + + G G N LH ++P Sbjct: 18 FLTTFGHSVTGPGHRYGPAVRSYHLIHFILAGKGTFQ-ANQHTYCLHAGQGFLIEPDYQT 76 Query: 99 SYHCE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNG--EIYNQELTEVAELITSPE 151 +Y + W W+ F + +I + Q IY E + V +++ Sbjct: 77 TYESDAKEPWTYIWVAFNGSRAAEIIASLRLSQADPIYTCTKEQGAKLAAYVQDMLAHNS 136 Query: 152 --AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209 + L + + I + + L++ ++V ++A Sbjct: 137 FTLSGRYYRLGLLMQFLSVLAEAQRDLLPPADNNAYISHMTNFIRTHLEEPFTVQELADY 196 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 + + +++ LF RY +P EY + RL A LL+ SV +A + + S F + Sbjct: 197 MNLNRSYVTTLFKRYLHCSPHEYIQNCRLTKARHLLETTTFSVESIAYSCGYAKSDSFQR 256 Query: 270 AFKHKFGYAPSAVLKNTD 287 AF K G P+A + Sbjct: 257 AFLRKAGMTPTAYRRQQQ 274 >UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales RepID=D1PEF6_9BACT Length = 291 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 12/273 (4%) Query: 26 VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85 + + G I+ Y + + + D +K I + + +Y +G G + + + Sbjct: 20 ISTVGREEIAPGEAYPTKGHADGYYFDLQKGRILDEYQLLYQPEGEGVFCSAHLPETKIK 79 Query: 86 GNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMD----IPVGQQSVIYNGEIYNQEL 140 I L P + HSYH G W+ YW+ F ++ D + + IY+ N+ + Sbjct: 80 AGDIFLLFPGEWHSYHPSGTKGWKSYWIGFKGKNIDDRVKAGFLSPEKPIYHVGYSNEII 139 Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLH 194 + E + A + I+ I MY+ + I K + Sbjct: 140 A-LYEEAYKTAQEEVAFAQQTMAGIVNHLIGKMYSLERNIVLSKDTKHVDMINKARLRIR 198 Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254 SL+ ++ ++A + S + R+LF +TG P Y + +L A LL S+ E Sbjct: 199 ESLEDTLTIQEIAQELGISYSSFRKLFKEHTGFAPALYQQNLKLQRAKELLSTTDESIKE 258 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +A LNF +FS FK + G PS T Sbjct: 259 IAYRLNFESPDYFSAKFKIQTGMKPSDFRNMTR 291 >UniRef50_C6IY48 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY48_9BACL Length = 315 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 110/315 (34%), Gaps = 38/315 (12%) Query: 2 NGKLQSSDVK----NETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPL 57 + + + P + +N + ++ + + + H+ +++P Sbjct: 3 HQIRKPDGFEAQMLFVQPDYMLKELNNSTLTRPLFVSDIGFFPNARHH------YRERPE 56 Query: 58 IANSWVAVYTVQGCGKILLKN-----------------GEQITLHGNCIIFLKPMDIHSY 100 A++ + +Y V+G G + + L + + H Y Sbjct: 57 GADAHIFIYCVEGEGWVEWSEEPTDGRPDRSGTTTSKMQQSYPLTERQLAVIPAHKPHRY 116 Query: 101 HCEGL-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITS--PEAI 153 W YW + + Q + + +L E E + Sbjct: 117 GASTDKPWSIYWFHLQGEDTNALIHTYGLDQGGPVRLPLSVHAQLLEHFEQCYRLLHDKH 176 Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQRR----QIEKLIATLHASLQQRWSVADMAAT 209 + + + + + + ++ Q R ++ + + L + +++++A Sbjct: 177 YSLPVQIHVAQTMRHLLSSIGLSAERSAQDRKRERYFDEAVRYMTERLTENLTLSELAKQ 236 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 + S+ L LF R G P EY+L ++ A LL G SV E+A + D ++FS+ Sbjct: 237 VGLSKQHLVYLFNREAGLPPIEYFLRLKMQRAGQLLDLTGLSVKEIAGAVGLSDPYYFSR 296 Query: 270 AFKHKFGYAPSAVLK 284 FK GY+P+ + Sbjct: 297 LFKKIMGYSPTEYRR 311 >UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1T1_CLOCE Length = 265 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 97/249 (38%), Gaps = 7/249 (2%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 ++ P ++ Y V G G + G++ L +C+ ++P ++ Y Sbjct: 19 CGWQSCDKGHFFGPASREYYLIHYVVSGSGVFE-RAGKRYPLSKDCLFLIRPYELTFYKA 77 Query: 103 EGL-VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 + WE W+ F + + D+ + + + E + + + Sbjct: 78 DKENPWEYIWIGFDGSLVPDLLKNSGFSDDICTMHIPSLSTTFLSMKE-VENLQHSSEIF 136 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 + ++ K ++ + ++ SV +A + +L Sbjct: 137 LCGKIFEMFSYLSEEFSPTPKGSTTSVYCKRAKDYIMSNYANHISVESIANMLGIDRRYL 196 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 R+F +YTG TP+ + ++ RL+ A LL + G +V E + + D ++FSK FK K+G Sbjct: 197 CRIFYKYTGSTPQNFIVNYRLEKAAFLLSKHGYTVAEAGRSTGYDDIYNFSKMFKKKYGV 256 Query: 278 APSAVLKNT 286 PS ++ Sbjct: 257 PPSRYKNDS 265 >UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EI06_PEDAC Length = 280 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 111/281 (39%), Gaps = 12/281 (4%) Query: 10 VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69 + N+ ++ +L++ + +S+ + + Y P + + + WV Y + Sbjct: 1 MNNQFTEDVSILVDNDPLSAEFHIYEV-------GYEKCQPTKPFEYIPIDYWVLHYVMD 53 Query: 70 GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTS----MMDIPV 124 G G N + L L + Y+ + W W+ + + I + Sbjct: 54 GKGYFSAGNSDLQHLSAGDTFLLPANCPNIYYPDKADPWTYVWVGISGELTAKYLAQIGL 113 Query: 125 GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR 184 +++ + N I + + + + +N +++ + ++ +A+ + ++ Sbjct: 114 SRRNFVINASIDKTKEMLFNHVYQAFKDKQNFQSLSAVYSLLDYLQQENHANNPVNQGKQ 173 Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244 +K++ + + +++ +AA ++L +LF RY GK P +Y +L A SL Sbjct: 174 IFDKILLYVDENFASGLTISQIAANNNVDRSYLYKLFQRYLGKKPSQYVHQLKLQKACSL 233 Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 L++ ++ +++ F S +F+ F + P Sbjct: 234 LRKSSLNITQISQECGFSSSAYFTNVFAKEMNSTPLKYRNR 274 >UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KAQ8_BACHD Length = 287 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 16/258 (6%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 Y +P K P + + ++ ++G G G+ +L F+ P ++ +Y Sbjct: 23 SGYSQTFPYHKVGPQVHDYFLLHVVLRGKGSFHCA-GKTYSLSAGDSFFIYPKELVTYES 81 Query: 103 EG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNG--------EIYNQELTEVAELITSPEAI 153 + W W+ F + + + Q ++ +T + Sbjct: 82 DRTDPWYYTWVAFQGPFFEETLRSAGIQPESPIVSLGGKGSMIKQLFYDLYSSMTELKVA 141 Query: 154 KNNLAVAFLTKIIYQWICLM-----YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAA 208 + A+L II ++I ++ + + I+ +I L + S+ +AA Sbjct: 142 SSLKTNAYLRLIISEFIEQTTILDEHSQKEDHQLDQHIQDVIRLLSLRYFEPLSIETIAA 201 Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268 + + + + F YTG +P +Y L+ R+ A +LL++ ++ EVA ++ + D +FS Sbjct: 202 SYGYNRTYFSKKFKEYTGYSPSKYLLNIRMKKAEALLQKS-LTIQEVASSVGYRDPLYFS 260 Query: 269 KAFKHKFGYAPSAVLKNT 286 K FK G APS + Sbjct: 261 KQFKQWSGVAPSVFRQQH 278 >UniRef50_A6M1I8 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1I8_CLOB8 Length = 279 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 101/254 (39%), Gaps = 7/254 (2%) Query: 39 TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98 T + + P P I + ++ Y + G GK + N + L + P + Sbjct: 18 TIYYGGHEICAPSHSFGPAIRHHYLLHYILNGKGKYYVNN-KCYELQRGEAFLICPGEST 76 Query: 99 SYHCEGL-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI 153 Y + WE W+ F + + + + ++I+ + LI + E Sbjct: 77 YYKADKEEPWEYCWVSFDGNDASTILKNCGLSKNNLIFKDNSNGIFKERLLSLIHNYEED 136 Query: 154 -KNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 N A+ + + + +K+ +K ++ + V+D+A + Sbjct: 137 SHNEYALIGQLYMCFSSMYDQVNIKEKNTCESYADKARDYIYNNFGYDIKVSDIAKYVGI 196 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 +L ++F+ +P++Y + +RL+ A++LL+ ++ E++ + F D+ F K FK Sbjct: 197 DRTYLYKIFMEEYKISPQKYLISSRLNTAVNLLETTKMNITEISYSCGFKDTPTFYKHFK 256 Query: 273 HKFGYAPSAVLKNT 286 +F P K+ Sbjct: 257 KQFNITPVQYRKSN 270 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 94/256 (36%), Gaps = 12/256 (4%) Query: 43 EHYRV--IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100 Y+ + + + +Y G G+ N E I + ++ P Y Sbjct: 46 CGYQRLQTRSLSRNREHGRVDFQLIYITGGKGRFRFHN-ETIEVPSGSLVVYTPGQPQHY 104 Query: 101 -HCEGLVWEQYWMEFTPTSMMDIPVGQQ------SVIYNGEIYNQELTEVAELITSPEAI 153 + E YW+ FT S D + + ++ + + S + Sbjct: 105 SYQAEDGTEVYWIHFTGYSAYDYLQQFGLLTQPVHTVGIIDDVTALFKKIIQELNSHRPL 164 Query: 154 KNNLAVAFLTKIIYQWICLMY--ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211 +++ A+L +++ + + + I ++IA +H + S++D+A Sbjct: 165 GSHMVNAYLLEMLTLLGRRLQTAEEPGAQGRHPDINQMIAFIHEKYSESLSISDLAGECS 224 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 S F TG TP +Y + R++ A LL + V EVA + + + +FS+ F Sbjct: 225 LSVFRFIHKFKEVTGMTPMKYITEIRINEAKKLLSESSLHVKEVAAVVGYDNPLYFSRIF 284 Query: 272 KHKFGYAPSAVLKNTD 287 + G PS K Sbjct: 285 RSTVGIPPSEYKKQFQ 300 >UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides RepID=A6KYC9_BACV8 Length = 298 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 108/300 (36%), Gaps = 26/300 (8%) Query: 7 SSDVKNETPYNIP----LLINENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANS 61 K E +P + ++ + S + + + ++ +A HYR + Sbjct: 5 KDGFKGERAIVLPAFLIEELKQDPLGSELYITDIGYYPHAYFHYRKRDTEEV------TE 58 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM 120 ++ +Y ++G G L + Q + N L H+Y W YW+ F T Sbjct: 59 FILIYCMEGEGWFEL-DKHQYAVTANQFFILPEHQAHAYGSNEENPWTIYWIHFNGTKAA 117 Query: 121 DIPVGQQSV----IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 G + L E+ +S + + + T ++ ++ M Sbjct: 118 FFSAGFDRPKSITPQEDSRIKERLVLFEEIYSSISFGYSKNYMLYATTSLFHFLGSMKFI 177 Query: 177 GKKDP---------QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 G+ + ++ I + +L + +AD+AA + S ++ LF TG Sbjct: 178 GEYRDCGSMRNSYRNKDVVQIAIHFMQENLSKTIRLADIAAEVNLSVSYFSNLFEEKTGS 237 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +P Y R+ A L + +++ + + DS +FS+ F G PSA + Sbjct: 238 SPLRYLTYLRIQEACHYLDFTNLKINQISPLVGYEDSLYFSRLFTKTMGVPPSAYKEKKK 297 >UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CX81_PAESJ Length = 272 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 11/248 (4%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104 P P I + + + +G G + + + L P + SY + Sbjct: 26 EDCSPNHAFGPGIRDHYKVHFVHRGTGTVQIGSS-TFKLTSGQAFLAYPGKVISYQADAF 84 Query: 105 LVWEQYWMEFTPTSMMDIPV-----GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159 W W+ F + ++ ++SV + + L E+ + Sbjct: 85 DPWSYSWIGFRGEQVGEVLERTKLTSEESVFPMDKQFMPNLYELLLESADHPKNHDLRLT 144 Query: 160 AFLTKIIYQWICLMYADG----KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 + L + + I + + + Q I + + +H+ + +V MAA++ Sbjct: 145 SLLIEFLTVLIDSLPSSADAGVQPRKQDTYIHRSLDFIHSHFSEPITVQQMAASLGLDRK 204 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 +L LF G P++Y L+ R+D A LL++ S+GEVA ++ + D+ FSK FK Sbjct: 205 YLSYLFKEAMGLPPQQYLLNYRMDRAGELLRKGEYSIGEVARSVGYQDALLFSKMFKKLK 264 Query: 276 GYAPSAVL 283 G P Sbjct: 265 GVPPKLYK 272 >UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococcus RepID=MSMR_STRMU Length = 278 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 115/278 (41%), Gaps = 14/278 (5%) Query: 25 NVISSGISLISLWHTYADEHY--RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82 N+++ + +HY P I +++V + ++G GK+ + N + Sbjct: 2 NILNIYNEFDINNFDLSVDHYGSEKCDRGYSFGPTIRDNYVIHFILEGKGKLTI-NQHTL 60 Query: 83 TLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIP---VGQQSVIYNGEIYNQ 138 L I L Y + + W W+ F+ + +I + + ++ Sbjct: 61 DLAAGDIFLLPKDISTFYQADLQMPWSYIWIGFSGSKAENILKQSSLFKRFYCHSGRSSK 120 Query: 139 ELTEVAELITSP----EAIKNNLAVAFLTKIIYQWICLM---YADGKKDPQRRQIEKLIA 191 +++ +I ++ L V L K++ I + + + + ++ Sbjct: 121 LFSQMMTIIQFANTPLTSVNELLMVGELYKLLAALIEEFPLSHLEESNSSTKAYVNQVKK 180 Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251 +H+ V D+A + S ++L ++F + T + KEY L R+ + LL+ S Sbjct: 181 IIHSQYGSSLRVNDIAKKLNLSRSYLYKIFRKSTNLSIKEYILQVRMKRSQYLLENPKLS 240 Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 + E+++++ F DS FSKAFK+ FG +PS K + Sbjct: 241 IAEISNSVGFSDSLAFSKAFKNYFGKSPSKFRKEIQNN 278 >UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW55_9CLOT Length = 286 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 98/255 (38%), Gaps = 10/255 (3%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101 ++ + + + ++ + ++G G L NG + + + P Y Sbjct: 24 RTGHQQCSGGYHRGLEVRDFYLIHFVMEGGGVYTL-NGRKHPVRKGQAFLIYPSMPIDYQ 82 Query: 102 CEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160 + WE W+ F + N I ++ + EL+ + + + Sbjct: 83 ADAADPWEFCWVGFNGNDARLLMNATGFTPQNPVITLKDPERMEELLMNIYRCRGHHPHE 142 Query: 161 FL--TKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 F+ T +Y+ + + + + +++ + + Q ++ D+A + Sbjct: 143 FINMTAKLYELLAFLIQEASDPMPAQSRTGVEHVQRACDFIASHYQDPITINDIAGHVGI 202 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 + L R+F + +P +Y + RL A +L+ +Q +V EVA F D +FS FK Sbjct: 203 CRSRLYRVFKAHLSISPLQYLTEFRLREACNLMNRQKATVKEVAYAAGFSDPLYFSTVFK 262 Query: 273 HKFGYAPSAVLKNTD 287 G +P +K++ Sbjct: 263 KSLGQSPKEYMKSSK 277 >UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NB33_LEPBD Length = 283 Score = 206 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 10/255 (3%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 Y P K P + ++ Y G G G+ L F++P +I Y + Sbjct: 21 GYEETKPLHKYGPTTRSGYMLHYIKSGKGTFYS-RGKTFHLKAGEFFFIEPEEIIWYEAD 79 Query: 104 G-LVWEQYWMEFTPTSMMDIP----VGQQSVIYN----GEIYNQELTEVAELITSPEAIK 154 W YW+ F + + V + I++ G+I ++ E+ E+ E Sbjct: 80 EYEPWAYYWIGFRGNMVSEYLRRTSVNKNKPIFSAQKGGDIIRDKIVEIFEISVISEDND 139 Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 L L + Y C KKD + + K + + + ++++A + Sbjct: 140 LLLNARLLEILYYLSECFPLTYAKKDSKNTILAKALQIMRNNFDTSVHISEIAKALYIDR 199 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 +L R+F PK+Y + R+ A LL Q V +A ++ D+ +FSK FK+K Sbjct: 200 TYLHRIFKEKMKIAPKDYLTNLRIAKAKELLTQTDYPVNIIAQSVGIEDAQNFSKLFKNK 259 Query: 275 FGYAPSAVLKNTDQH 289 +P K+ Sbjct: 260 ENISPINYRKSYKNS 274 >UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KWQ1_9FIRM Length = 311 Score = 206 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 91/263 (34%), Gaps = 12/263 (4%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 P + P N ++ G G + + NGE L L P Y Sbjct: 41 CGKERCVPGHRYGPNKRNLYLLHVVYSGVGTLFV-NGEYYHLSKGNAFLLYPHVEAWYEA 99 Query: 103 E-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELIT------SPE 151 + W +W+ ++ + + L + +++ + Sbjct: 100 DLTEPWSYFWIGVRGVDADSFFTEVGFSKEKPVGIVHQMDNLLLYINKILQKQDYTIEEQ 159 Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211 ++ F ++ + G ++ A L + S++ +A + Sbjct: 160 LSRSAYMHLFFANLLRGKQEEAHWGGPLKDLGSHSARVRAYLDEHYHEDISISALAKEMG 219 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 A L F + TG +PKEY L R+ A ++L++ G S+ E+A + + D FSK F Sbjct: 220 IHRAHLFNSFKKDTGYSPKEYLLYIRMQNAKAMLRRTGKSIAEIAYMVGYHDPLSFSKIF 279 Query: 272 KHKFGYAPSAVLKNTDQHPTDAS 294 + K G +P ++ + Sbjct: 280 RQKIGVSPLQYRNMKEEMLYNRE 302 >UniRef50_B8KL56 AraC protein, arabinose-binding/dimerisation n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KL56_9GAMM Length = 299 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 110/282 (39%), Gaps = 16/282 (5%) Query: 14 TPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGK 73 TP + ++++ +++G ++ + + + + +++ + + ++ QGCG Sbjct: 25 TPGFLLDALDKHPLTAGCYPAAMGYYPNADGHFM----HRER---HDDNLLMFCTQGCGW 77 Query: 74 ILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVG---QQSV 129 + G +++ + L HSY + W YW+ F D + Sbjct: 78 VQTPAGR-VSVDAGDTVVLPQGLTHSYAADERTPWTLYWVHFQGRDAQDFVEHLLIEDGY 136 Query: 130 IYNGEIYNQELTEVAELITSPEAIKNN----LAVAFLTKIIYQWICLMYADGKKDPQRRQ 185 + + LT +++T A L ++ ++ ++ + Sbjct: 137 RIHSGVEPSLLTGFEQMLTVGSTGYRLDAFIGAANRLRHLLAEFALCRDRQRGQNMGAMR 196 Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 + +L + + + S+ ++AA + + TG +P ++L +++ A LL Sbjct: 197 LLELQSFMRERVSSSLSLQELAAFTGLTPQHFATRYKAETGYSPMRHFLHMKMEAACRLL 256 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +SV +A L + D +FS+ F+ G +PS ++ Sbjct: 257 DSTQHSVKFIAANLGYVDPLYFSRMFRQTVGLSPSQYRESQR 298 >UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ5_9FIRM Length = 301 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 102/271 (37%), Gaps = 24/271 (8%) Query: 28 SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGN 87 S ISLI + + P + ++ + + G G G+ +L Sbjct: 22 SLDISLIHTGKEHCPPGHICSMP--------RDEFIIHFVLDGTG-FYSAGGQTWSLTPG 72 Query: 88 CIIFLKPMDIHSYHCEG-LVWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTE 142 + + P + +Y + W W+ F + + + + ++ L Sbjct: 73 QMFVIYPNEPVTYGADETNPWTYAWIGFRGIRAHSMVKECGFSKNQLVLPAPDQKIILKH 132 Query: 143 VAELITSPEAIK--NNLAVAFLTKIIYQWICLMYADGKKDPQRR--------QIEKLIAT 192 + ++ + K + A+L ++ + ++ + +E I Sbjct: 133 IDYMLNHKQLSKANDLRRQAYLILLLAELAGFHEKQSAQNKKNAKYAYSTSVYVELAIEY 192 Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 + Q+ ++D+A I S A+L F + G + + + +D ++ A SLL SV Sbjct: 193 IKDMYQKGIGISDIADNIGISRAYLNSSFQKELGMSAQTFLIDYKMHKAASLLVSTSLSV 252 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 E+A+ + + D FSKAFK KFG +P Sbjct: 253 KEIANNVGYEDQLVFSKAFKKKFGMSPKNYK 283 >UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Bacillales RepID=C6IZS2_9BACL Length = 287 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 103/259 (39%), Gaps = 14/259 (5%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-G 104 P + P I + ++ + QG G + L + P + SY + Sbjct: 28 SQTLPDHRLGPKIYDYFLLHFVEQGKGTFRTE-SASYELSEGDGFLILPDQLVSYASDVA 86 Query: 105 LVWEQYWMEFTPTSMMDIP----VGQQSVIYN---GEIYNQELTEVAELITSPEAIKNNL 157 W W+ FT ++ Q ++ L+ V + + + + L Sbjct: 87 EPWRYRWIAFTGVKAAELVKRVGFTPQQPVFRQGGNSPIPAMLSSVLQAFQTKKNSSHLL 146 Query: 158 AVAFLTKIIYQ----WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 ++ L +I+ + + +R ++++I + + S+ M A++ + Sbjct: 147 SLGLLHQIMAEAQETLGMASALPSGESGVQRIVKQMIHYMASQYAHPVSIEQMCASLGYN 206 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ-QGNSVGEVADTLNFFDSFHFSKAFK 272 A+L R+F + TG TP Y L R+D + LL++ S+ ++A ++ D +FS+ F+ Sbjct: 207 RAYLSRIFKKETGFTPVTYLLKLRIDKSRQLLRERPELSIEQIAASVGLTDPLYFSRQFR 266 Query: 273 HKFGYAPSAVLKNTDQHPT 291 +PS + ++P Sbjct: 267 RFHNESPSEYRRAVTRNPA 285 >UniRef50_C9KYS9 Transcriptional regulator n=7 Tax=Bacteroides RepID=C9KYS9_9BACE Length = 312 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 113/292 (38%), Gaps = 11/292 (3%) Query: 2 NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61 +G + K ++ V + G I Y + + + + +K + Sbjct: 16 DGTSLGLEFKYLIVNDMDRKFGLWVNTVGYQSIPPDSPYPLKEHPSGYFFNAEKGRVLRE 75 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM 120 + VY +G G + + + ++ L P H+Y W +Y++ F ++ Sbjct: 76 YQLVYITKGRGLFSSDSTPEKQVCKGRLMVLFPGQWHTYRPLRQTGWTEYYIGFEGPAID 135 Query: 121 ----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + + Q+ I I N+EL + + A +L+ I+ I ++ + Sbjct: 136 AIVANSFLSQEQQILEVGI-NEELVSLFSRALAVAEADKISAQQYLSGIVLHIIGMILSI 194 Query: 177 GKK-----DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 K ++IE+ ++ ++ ++A + S +W RR+F YTG P + Sbjct: 195 SKNKVFEMSDVDQKIEQAKIIMNENVSGNVDPEELAMRLNISYSWFRRVFKEYTGYAPAK 254 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 Y+ + +L A LL SV E++ L F + +F FK + G P Sbjct: 255 YFQELKLRKAKQLLVGTSQSVKEISFFLGFQSTEYFFSFFKKRTGLTPLEYR 306 >UniRef50_C5BZM6 Transcriptional regulator, AraC family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BZM6_BEUC1 Length = 291 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 92/289 (31%), Gaps = 12/289 (4%) Query: 8 SDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYT 67 + +P + + + L ++ +++ V + Sbjct: 4 DGFPGQRLRVLPRPLVHTALGRPPTSRLL--VTDAGYFPHAMNHGRRRTRGTREAVVILC 61 Query: 68 VQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPV-- 124 G G+ G + ++ + P H Y + W +W + Sbjct: 62 TDGVGRCE-AGGRVTEVGAGQVLVIPPGLPHLYWADMHQPWTIWWFHAVGEDVTPFLEAM 120 Query: 125 ---GQQSVIYNGEIYNQE--LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179 V+ +++ + +V + E + + + A + + + G Sbjct: 121 VCTNAARVVGVHDVFRATGGIEDVVRAMEQDETLPSLVTAAGAAWSVLAQLTADHLSGGA 180 Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239 D + L SV ++A S + LF TG EY R+ Sbjct: 181 DQAEP-VRAAQEYLRLHFHLPVSVPELARIAGLSTSHFAALFRAATGSGVSEYVKRLRMS 239 Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 A LL +V EVA T+ + D+F+FS+ F+ G +P+ + + Sbjct: 240 RARELLLTSDRTVAEVATTVGYPDAFYFSRQFRRVAGVSPTEYRRAFHR 288 >UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulatory protein n=15 Tax=Bacilli RepID=Q4V1B1_BACCZ Length = 301 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 97/259 (37%), Gaps = 10/259 (3%) Query: 39 TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98 + + P P + NS++ + G GK +K ++ +L + + P + Sbjct: 19 YFDFCGFSKTLPFHAFGPAVRNSYIIHVVLDGKGKYYVKE-KKYSLKKGDLFLIPPGEST 77 Query: 99 SYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPE--AIKN 155 Y + W W+ F +I N + + + + E+I + Sbjct: 78 FYRSDAEEPWLYAWLSFGGKVAEEIINFSNFKDDNYAVTSTNIQQYLEIILECMNCSYST 137 Query: 156 NLAVAFLTKIIYQWICLMYADGK------KDPQRRQIEKLIATLHASLQQRWSVADMAAT 209 L ++ Y+++ L DG K R + + + + +V+D+A Sbjct: 138 LENELKLNELTYRFLRLFLTDGSSLSPGVKQKFSRLAIEAMIYIGKHYIEEITVSDVANH 197 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 + + + L R+F + G + K++ + R++ A LL SV ++ + F FS+ Sbjct: 198 LAVNRSHLSRVFQNHFGISMKDWIIRMRINHAAYLLSMTNESVENISYQVGFHSLAAFSR 257 Query: 270 AFKHKFGYAPSAVLKNTDQ 288 FK P+ K + Sbjct: 258 IFKKVTKETPTHYRKRMSK 276 >UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRK8_PAESJ Length = 284 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 94/256 (36%), Gaps = 14/256 (5%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105 + P P + + ++ Y G G+ L LH + P + Y + Sbjct: 27 QDCDPGHYWGPGLRDMYIIHYVHSGTGQFRLGEL-SYELHAGQGFLIIPGSLVYYKADED 85 Query: 106 -VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160 W W+ + + + I++ V E Sbjct: 86 NPWTYSWVGLKGLHAKSLLQRAGLSPANPIFDATEQKDFFESVYEQCHQALEDHPGSGDL 145 Query: 161 FLTKIIYQWICLMYADGKK--------DPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 F ++YQ++ + A K+ + + I K +A + S SV D+A + Sbjct: 146 FSQSLLYQYMARLVACNKQPSAPAHAVNTKEAYINKAVAFIENSYSLPISVQDIANFVGL 205 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 +L LF G + + + L R++ A+ LL Q ++G++A ++ + D F FSK FK Sbjct: 206 DRTYLSGLFKAQLGVSLQAFLLRFRMNRAVELLHHQELTIGDIARSVGYTDPFLFSKMFK 265 Query: 273 HKFGYAPSAVLKNTDQ 288 G +P + ++ Sbjct: 266 RVIGSSPRTSRDHINR 281 >UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXI4_DYAFD Length = 298 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 109/295 (36%), Gaps = 16/295 (5%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 +S E IP + + + LIS +Y ++P + + + Sbjct: 3 KSRGFDGELIIEIPKVATSH--CEQLPLISHLFISRMGYYPKALHHYYQRPNGISQAILL 60 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM---- 120 Y G G I L G Q+ + +I L H+Y + W YWM Sbjct: 61 YCTDGQGWIELG-GNQLHVRAGEVILLPTELPHAYGADTQNPWSIYWMHIAGDHSDAAVA 119 Query: 121 -----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF-LTKIIYQWICLMY 174 D + + + N T +A + + N L L + +I + Sbjct: 120 AVMDRDGEPARAVHVGFSDERNALFTHIASTLLKGYSASNLLQANLALPHYLSSFIAPEH 179 Query: 175 ADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232 +K EK I + +L S+ ++A ++ S ++ R F + TG P EY Sbjct: 180 FGAQKPSAGAGSPTEKAILYMQENLSNSLSLDNIARSVNLSVSFFSRRFKKDTGYAPIEY 239 Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 + R+ A LL + EVA + D F+FS+ FK + G +P+ KN D Sbjct: 240 FNYLRIQKACQLLHFSTWRINEVASAIGIDDPFYFSRLFKQQMGLSPAHYRKNKD 294 >UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MQ0_JANSC Length = 313 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 105/269 (39%), Gaps = 9/269 (3%) Query: 28 SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQ-ITLHG 86 S+G + ++ + Y + K + + ++ V+ +G G++ L +G + +H Sbjct: 36 SAGFTQVAPYAVYPAGTHPKDHLFSKTRGRVLQAYQIVFISKGRGRVELGSGRKAQEIHA 95 Query: 87 NCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELT 141 + L P H Y E W ++W+E T+ + I + Sbjct: 96 GQVFVLFPNVWHRYAPEPSVGWTEHWVECKGTAFDMSLNAGLLDPGRPIIRHPNFEAVHD 155 Query: 142 EVAEL--ITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ 199 AE+ + +A+ N ++ L+ + + + +D R + L Sbjct: 156 TFAEIHGLAGTDAVGNQPVLSMLSLKLLAILA-GPRNANEDSTNRLVNSARMILLEHCTG 214 Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259 + + D+A + S + LRR F TG + K+Y + R+ A LL SV VA L Sbjct: 215 QRPMEDIADELNVSYSTLRRTFRVQTGMSMKDYQMAMRIQKAKDLLDNTELSVKGVAGQL 274 Query: 260 NFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 F +FHFS F+ G PS Q Sbjct: 275 GFSSAFHFSSQFRKTVGCPPSDWRARLGQ 303 >UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C7G788_9FIRM Length = 292 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 100/291 (34%), Gaps = 12/291 (4%) Query: 8 SDVKNETPYNIPLLINENVISSGISLISLWHTYA-DEHYRVIWPRDKKKPLIANSWVAVY 66 + E + +VI++ + + + Y + NS++ Sbjct: 2 QKLFFEKYKTSEVTNTRSVINTPSAFTRKNFFHIQEAGYLKSLKSHLSRRSELNSYLFFV 61 Query: 67 TVQGCGKILL------KNGEQITLHGNCIIFLKP-MDIHSYHCEGLVWEQYWMEFTPTSM 119 + G G++ T H FL + + WE W+ F Sbjct: 62 VLSGSGEVTYREPLSEGGMISSTAHAGDCFFLDCSGEYTHISTDEDPWELLWIHFNGPEA 121 Query: 120 MDI---PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + + + + + + +I E ++ + +II+ + Sbjct: 122 RAYYTYFRDHHNWHFRSAHFTELINAIESIIRYNEEPTDDTDLLTAQQIIHILTLICTES 181 Query: 177 GKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 +K+ +++ ++ L + S+ +A S+ +L R F + G T +Y L Sbjct: 182 NEKNELLSDKLKTILHYLDEHYTENISLDQLAEQFFISKYYLSREFKKEFGTTVIQYVLA 241 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 R++ A LL+ +S+ E+A D+ +F+K F+ G S K Sbjct: 242 KRINNAKELLRYSNSSIEEIAHLCGIDDASYFNKVFRKMEGCTASEYRKRW 292 >UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales RepID=A6LD39_PARD8 Length = 297 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 108/291 (37%), Gaps = 17/291 (5%) Query: 9 DVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTV 68 + P + E +++ + + ++ ++ + ++ +Y Sbjct: 7 GFSGQRLIVYPFYVIEQALNNPLVADLV--VHSMGYFPKAESHYIDRASGCGEYLLIYCT 64 Query: 69 QGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQQ 127 +G G + +G++ + N L H Y E W YW F I Q Sbjct: 65 KGEGWY-VLDGKRYVVPENHFFILPAEKPHQYGSSEHDPWYIYWAHFKGKKAKYISDQLQ 123 Query: 128 SVIY----NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM-----YADGK 178 VI + + EL+ E+ + V ++ I Y + K Sbjct: 124 GVIPIDMDDNSRIGDRIAFFDELLNVLESGTDEATVNYVNLSFNHLIASFLYVKTYREAK 183 Query: 179 KDPQRRQ----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 + + I + +L+ + ++ ++A+ SE+++ RLF + TG P Y+L Sbjct: 184 FSKSKAENTFFISLATHFMTENLENKLTLKELASHFGYSESYMYRLFFKETGYAPMNYFL 243 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 ++D A LL + +VA L F D ++FS+ FK G +P + Sbjct: 244 HMKIDRACQLLLHTNMKINQVALKLGFDDPYYFSRIFKKIVGTSPKDYRHS 294 >UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Bacillales RepID=C6IVE8_9BACL Length = 289 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 91/256 (35%), Gaps = 18/256 (7%) Query: 49 WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVW 107 P + P + + ++ +G G G++ + + P + +Y + W Sbjct: 32 HPNHRIGPSVHDYFLLHTVFEGKGTYTWG-GQEYSCRTGDTFVIFPEGLFTYEADSLDPW 90 Query: 108 EQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELI--------TSPEAIKNNLAV 159 W+ + ++ + + E E+ EL S +L Sbjct: 91 HYAWVALRGSGVLRQLADVGITPDKPVVSSGEPEELRELYARLRSSFRQSDHPHLESLEA 150 Query: 160 AFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIATLHASLQQRWSVADMAATIPC 212 A ++ + + RQ+E+ I Q+ + ++A + Sbjct: 151 AGWVTLLLHHFGVANREHLPRSAAKEPAMIDRQVEQAIRWFQLQYPQQIGIEELARNLGY 210 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 A L F TG +PK+Y R++ A LL ++ ++A ++ F D+ +FS+ FK Sbjct: 211 HRAHLFSAFKARTGLSPKQYLTKVRIEKAKELLAGP-LTIDQIASSVGFNDALYFSRQFK 269 Query: 273 HKFGYAPSAVLKNTDQ 288 G +PS + Sbjct: 270 KSTGKSPSEYRHGNGR 285 >UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon transcriptional regulator, putative n=29 Tax=Firmicutes RepID=A3CML2_STRSV Length = 290 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 102/259 (39%), Gaps = 16/259 (6%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 Y P P I +++V Y +G G+ K G+ + L + LKP ++ Y Sbjct: 33 YGYEECTPSYSFGPAIRDTYVLHYITKGKGQFHYK-GKIVDLKAGDLFLLKPNELTFYQA 91 Query: 103 EGL-VWEQYWMEFTPTSMMDIPVGQQS-----VIYNGEIYNQELTEVAELI--TSPEAIK 154 + W YW+ T + D Q ++ N E + ++ E + + + Sbjct: 92 DKEEPWSYYWLGMTGGRVYDYFNHSQIAEDCYLLANQERKTDRIGKIVENLVYFAEQTKS 151 Query: 155 NNLAVAFLTKIIYQWICLM------YADGKKDPQRRQIEKLIATLHASLQQR-WSVADMA 207 N LA + +Y+ I + ++ + S+ DMA Sbjct: 152 NQLAQLHIMGQLYELIFHLGSVAYKPQANTLSASQQLYLACKQIIDTQYPNPNLSIQDMA 211 Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267 + ++L +F +PKEY R+ A LLK V +A ++ F D +F Sbjct: 212 IKLSVHRSYLTTIFKEEHQSSPKEYLEYVRMHRAKQLLKSTREPVQFIAYSVGFSDPLYF 271 Query: 268 SKAFKHKFGYAPSAVLKNT 286 SKAFK FG++PS+ + + Sbjct: 272 SKAFKKYFGFSPSSFREQS 290 >UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36461 Length = 276 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 86/255 (33%), Gaps = 7/255 (2%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 P + + + + ++G G G+ + ++P ++ Y Sbjct: 6 CGREDCEKGHFFGPAVRSHQLIHFVLKGKGIYRTGYGQ-YEIKEGEAFLIRPGEVTYYQA 64 Query: 103 E-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSP-----EAIKNN 156 + W W+ F + E+T V+ A +N Sbjct: 65 DFEEPWSYAWIAFDGDGAEALLERYYPDHSFPVCAMGEITAVSGWFEGLLGAFGSAEENR 124 Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216 V +I + G + ++ +A + + ++++A + + Sbjct: 125 ERVLGYFYLIMACLLRSGKGGVPVDEEGYFKRAVAFIRHNYSYPIQISEIAGYVGIDRTY 184 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 L R+F+ G +PK+Y RL+ A +L Q + E+A + + DS F + F+ G Sbjct: 185 LYRIFMHQAGVSPKQYLSRYRLEEAKEMLVQTEYRITEIAYSCGYHDSSSFCRHFQKATG 244 Query: 277 YAPSAVLKNTDQHPT 291 AP+ P Sbjct: 245 NAPARYRSMKKIKPG 259 >UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=Serratia RepID=A8GGG4_SERP5 Length = 282 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 96/259 (37%), Gaps = 12/259 (4%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104 P + ++ Y + G G + + G + + P D+ +Y + Sbjct: 23 ENCDKGHSFGPAVRQHYLFHYVISGTGVLHSEYG-AFPVVAGEGFLIHPHDVTTYRADKK 81 Query: 105 LVWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEV--AELITSPEAIKNNLA 158 W W+E + + +Q IY ++ + + S + Sbjct: 82 DPWHYMWLEVDGLVAGKIFEECRLSRQFPIYRPRKTDETPQALSYLRQLVSHDDEHRLKT 141 Query: 159 VAFLTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216 + I + P + + K + + + ++ +AA + ++ Sbjct: 142 LGLSYLFFSALIDNALQGSDEHPSDKTQHLHKAVKLIENRYHEHLTIERLAAYCNINRSY 201 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 L RLF G PKEY L+ R+ LA SLL+ ++ V ++ + + HFSKAFK G Sbjct: 202 LCRLFKGAYGIGPKEYLLNFRMTLATSLLRNSRTAIKVVGISVGYENQLHFSKAFKQVHG 261 Query: 277 YAPSAVLKNTDQHPTDASP 295 +P+ + P +ASP Sbjct: 262 VSPAQWRQE--NQPDNASP 278 >UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=bacterium Ellin514 RepID=B9XJ41_9BACT Length = 295 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 105/296 (35%), Gaps = 13/296 (4%) Query: 1 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60 M + + + +P I I + + L +Y + Sbjct: 1 MKTREKPEGFVGQRLVVVPRPILAASIKNPLLQHLL--PTDAGYYPTAKGHVCVRRKGCP 58 Query: 61 SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS- 118 + +Y +G G + G + + N ++ + H Y + W +W ++ Sbjct: 59 EVIFIYCAKGNGWCEIA-GRKHQISKNQLLVINAFTPHVYGADKNSPWTIHWFHAVGSNV 117 Query: 119 ---MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 + + V ++ + Q + E++ S E + + + + L+ Sbjct: 118 SVYLDKLGVTEEKPVVPLGGDVQLFSLFEEVLESLEHGFTPTHLIYAAHSLTHLMGLILR 177 Query: 176 DG-----KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 + R ++ I + L++ ++ +AA + S + F R TG P Sbjct: 178 HKDEFGYGETSVRERMANSIEFMKGHLREPLNIVTLAALVNLSRSHYSTSFRRVTGYAPL 237 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 Y R+ A+ LL S+ E+ D L F D F+FS+AF+ ++PS + Sbjct: 238 SYLNHLRMQRAVQLLNATELSIKEIGDQLGFSDQFYFSRAFRKVHNHSPSEHRRRY 293 >UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8J8_PAESJ Length = 294 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 87/256 (33%), Gaps = 18/256 (7%) Query: 49 WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVW 107 P K P + N + G G + ++ L I + P + +Y + W Sbjct: 34 RPLHKVGPAVYNYTLIHSIDHGFGTFEWQ-RKKYHLGKGDIFVIFPGVLFNYEADKAEPW 92 Query: 108 EQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI-- 165 W+ ++ ++ I N + + +A + + E + +T + Sbjct: 93 SYRWVALQGRNVTEMLENVGVTITNPIVRGADSANLASIFETIEQELELKSGETITSLAT 152 Query: 166 ---IYQWICLMYADGKKD----------PQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 + R +E+ I S+ +A ++ Sbjct: 153 DGWFRLLLAEFARLNTNKLHYSSTKVLTDSERLVEQAIRWFQTQYMLPISIEKLATSLGY 212 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 ++F + T +PK+Y R++ A LL S+ +V ++ F D +FSK FK Sbjct: 213 HRTHFTKVFKQLTSLSPKQYINQVRMERARELL-NTNISIEQVGNSCGFTDPLYFSKQFK 271 Query: 273 HKFGYAPSAVLKNTDQ 288 G +P+ + + Sbjct: 272 KWTGTSPTQYREELKR 287 >UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae RepID=C6BAA0_RHILS Length = 288 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 96/268 (35%), Gaps = 9/268 (3%) Query: 27 ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLK-NGEQITLH 85 IS+G + I Y + + I +++ V G G++ +T+ Sbjct: 22 ISTGYTEIGPNSDYPPSRHPDDHHFSWSRGRILSAYQIVQISAGSGRLEFGPERRPVTIA 81 Query: 86 GNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMM-----DIPVGQQSVIYNGEIYNQE 139 I L P H + + W ++W+E ++ + + + + Sbjct: 82 EGSIFLLFPGVWHRFAPDRRTGWVEHWIECRGSAFDFARDAGLLRPELPAHASSSEISGV 141 Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ 199 + L L +++ AD + R +++ L Q Sbjct: 142 FASIHALAQDDCLRNQPLLSTLGLQLLALICR--PADLNTNAVNRLVDRARMVLMERCGQ 199 Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259 SV +A + S + RRLF TG + K+Y + RL A+ LL S+ E+A L Sbjct: 200 PLSVEQLADELGVSYPYFRRLFREQTGMSAKQYQMRVRLQRAIDLLVNTDKSIKEIAGLL 259 Query: 260 NFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 F +FHFS F+ G +P+ Sbjct: 260 GFHSAFHFSTQFRQLIGSSPTDFRAAKR 287 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 89/251 (35%), Gaps = 12/251 (4%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFT 115 + Y + G G+ L G+ + + ++ + P H+ E + Sbjct: 37 HTHSCTELFYCLSGEGQFYLA-GQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVA 95 Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELI--------TSPEAIKNNLAVAFLTKIIY 167 + I+N + + + ++ E + +L L ++ Sbjct: 96 SMEFLFSKADTNYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVR 155 Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 + + + R+ ++ L + ++ S+ +A ++ +L F R G Sbjct: 156 CTTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDLLAELAHLNKYYLAHTFQREYGI 215 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +P Y R++ + +L G S+ ++++ + F +FS+ F+ G P+ + T Sbjct: 216 SPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGMTPNEYRRQTR 275 Query: 288 Q--HPTDASPH 296 Q P H Sbjct: 276 QGKRPAPTKRH 286 >UniRef50_UPI00017450D3 transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017450D3 Length = 285 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 93/284 (32%), Gaps = 10/284 (3%) Query: 20 LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNG 79 + + ++ + +T + + VY ++G G + + G Sbjct: 3 RFVRSYFHTERDAVRASLYTTVRAGHLTADKTHHIERETLAGHELVYCLRGSGTVRVA-G 61 Query: 80 EQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPT------SMMDIPVGQQSVIYN 132 + + ++ H Y + WE YW+ S++ I + + Sbjct: 62 RVHRVKARGLYWVSCWHPHQYQADPIQPWELYWVRIEGPGLDALASLLRIRETPVFPLLD 121 Query: 133 GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD--PQRRQIEKLI 190 + ++ SP + +++ + DG +D P +E+ + Sbjct: 122 DAATKACFMDAFNILESPSPNAPASMHVAVARLLSLLYENRFKDGGQDTEPVPSTLERPL 181 Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250 + ++D+A S + R F R G +P ++ R++ A L Sbjct: 182 IRMRQHYADALRLSDLAHLAGMSVSHFIRTFKRTMGTSPIDWLRRERMNQAKHRLIDTDE 241 Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294 + E+A + D + FSK FK G P+ + S Sbjct: 242 PIKEIARQCGYRDPYFFSKDFKKLTGLPPTDYRVQERGRAHETS 285 >UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM61_9FIRM Length = 252 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 17/238 (7%) Query: 67 TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVG 125 +G G + + TL + + Y + W W+ F S + Sbjct: 2 VQEGRGYLEMGEA-HYTLEKGDVFLIPEGVEAWYEADKETPWSYRWIGFEGVSARECLES 60 Query: 126 QQSVIYNGEI----------YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM-- 173 Y ++ + +L E +N L + ++I + Sbjct: 61 AGFTPQKPVRKVRCLDKVGGYIDQMLKCHQLYYENELKRNALLMLVFAELITDNRKNLAG 120 Query: 174 ---YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 Y + P +E I ++ + +R + ++A I + ++L F G +P+ Sbjct: 121 MGKYPSEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQENIGCSPR 180 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 EY + R++ A +LLK V EVA + + D FSK FK + G +P + + Sbjct: 181 EYLMKLRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYKEEKSR 238 >UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=Lactobacillus RepID=C2EDY7_9LACO Length = 284 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 99/255 (38%), Gaps = 10/255 (3%) Query: 40 YADEHYRVIWPRDKKKPL-IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98 P K I ++V Y +GCG + L L Sbjct: 27 IIFYGLECCEPNYIFKGNNIRENYVIHYIRKGCGTFSSAGRPVVELKQGDCFILPKGVPC 86 Query: 99 SYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYN------GEIYNQELTEVAELITSPE 151 Y + WE W+ + +I N + L+ + E + Sbjct: 87 FYQADEKDPWEYSWIGLSGIRTGEIFAASSISEKNYLCQIQDTEFKNSLSRLYESLHLTH 146 Query: 152 AIKNNLA-VAFLTKIIYQWICLMYAD-GKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209 +KN+L + L K+ + + A+ +K R Q + + + S+ D+ Sbjct: 147 NMKNSLLTESLLYKMFHDLLDEFPAEVTRKTNSRTQFRLAVEYMRDNYDTGCSILDVCRG 206 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 + S ++L LF ++ G +P+++ + R++ A LLK S+ +AD++ + DSF FSK Sbjct: 207 LSVSRSYLYSLFKKFAGSSPQKFLTEIRMEEAEHLLKDTDRSIQNIADSIGYGDSFTFSK 266 Query: 270 AFKHKFGYAPSAVLK 284 AF+ G +P+ + Sbjct: 267 AFRKSRGCSPTDFRR 281 >UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CL13_STRSV Length = 282 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 96/256 (37%), Gaps = 11/256 (4%) Query: 39 TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98 +A Y P + + +V ++G G + N ++ L + P Sbjct: 19 FFAFCGYSKTEAHHSFGPAVRDVYVIHIVLEGRGTYSVGN-QRYDLQEGQGFVVPPGQSV 77 Query: 99 SYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN- 156 Y + W WM + L E L+ A + + Sbjct: 78 FYQADREEPWSYVWMGLGGRLLPRYLQDLGLQSGQWSFELTSLQEFKALVFESLAYEGSG 137 Query: 157 -LAVAFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIATLHASLQQRWSVADMAA 208 A L + +Y+++ L+ K+ +++++ L + L + SV ++A Sbjct: 138 ITAELALQRQVYRFLELLSQRLKQTSLITESRRVNPYVQQVLELLSSHLPESLSVQELAQ 197 Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268 + ++L RLF GK KEY D RL++A LL SV E+A+ F + FS Sbjct: 198 KLALHPSYLSRLFKDEVGKGIKEYSNDLRLNMAADLLTGSQLSVEEIANKTGFAGTQSFS 257 Query: 269 KAFKHKFGYAPSAVLK 284 KAFK G +P K Sbjct: 258 KAFKKARGQSPLNFRK 273 >UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN80_9FIRM Length = 285 Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 100/257 (38%), Gaps = 10/257 (3%) Query: 49 WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VW 107 P P + + + Y +G K + NG L F+ P Y +G W Sbjct: 28 MPGQVCGPRVRSYCLLHYITKGKCKFQV-NGMTYHLQAGQGFFIAPDFETRYETDGDEPW 86 Query: 108 EQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAI--KNNLAVAF 161 W+ M + + Q + I++ ++ + V +++ + + ++ Sbjct: 87 NYIWVGAAGEEMKHLMHVLGLSQANPIFSCHQGDRLVHCVRDMLQHRQMTMTDHYFRMST 146 Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 L + I + I ++ + L + S A++AAT+ + ++L LF Sbjct: 147 LYRFIAILSEERQVNQPLASVNSYIANVMTYVRHHLHEHMSTAEIAATMNLNRSYLSSLF 206 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 TG T + Y R+ A LL+ S+ +A++ + S ++ F+ +G +P+ Sbjct: 207 RSQTGMTLRSYIQLCRMTRAKYLLESTHLSIASIAESCGYEKSDSLNRTFRKTYGISPAD 266 Query: 282 VLKN--TDQHPTDASPH 296 K+ DQ + PH Sbjct: 267 YRKSFLADQTQSSRKPH 283 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 92/251 (36%), Gaps = 12/251 (4%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFT 115 + Y + G G+ LL +G+ + + ++ + P H+ E + + Sbjct: 68 HTHSCTELFYCLSGEGQFLL-SGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVS 126 Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELI--------TSPEAIKNNLAVAFLTKIIY 167 ++ I+N + + + ++ E + +L L ++ Sbjct: 127 GIEILFGKADSTYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVR 186 Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 + + R+ ++ L + ++ S+ +A ++ +L F + G Sbjct: 187 CTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDTLAEVAHINKYYLAHTFQKAYGI 246 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +P Y R++ + +L G S+ ++++ + F +FS+ F+ G P+ + Sbjct: 247 SPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGLTPNEYRRQVR 306 Query: 288 --QHPTDASPH 296 Q P A H Sbjct: 307 QGQRPAPAKRH 317 >UniRef50_C9AKD6 AraC-type DNA-binding domain-containing protein n=3 Tax=Enterococcus faecium RepID=C9AKD6_ENTFC Length = 286 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 95/254 (37%), Gaps = 11/254 (4%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 Y PR P I ++ ++G G + N ++ L + P Y Sbjct: 25 CGYSKTEPRHSFGPAIREQYLIHILLEGEGYYSI-NDQKYFLKKGQGFVIPPGVSTFYQA 83 Query: 103 E-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPE-----A 152 + W W+ + + +I VG+ + + E N + E ++ + Sbjct: 84 DEKNPWSYVWLGLSGNLVEYYLKEIGVGKNHLTFKVENLNSFKGLIFETLSYDQDNLVSE 143 Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 + V +++ + + + I + + Q+ SV D+A ++ Sbjct: 144 LSRQKQVYKFLELLLNSASYLNEGIITKKMNPFVRQTIEIIRENAYQKLSVKDIAVSLSI 203 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 E +L RLF G + KEY + ++ +A LL S+ +++D + F FSKAFK Sbjct: 204 HENYLSRLFKNDMGISIKEYISEIKISIANDLLSSTEYSIQQISDKIGFSTVQSFSKAFK 263 Query: 273 HKFGYAPSAVLKNT 286 G +P K Sbjct: 264 KANGVSPGVYRKRR 277 >UniRef50_A8YTU0 Msm operon regulatory protein n=3 Tax=Lactobacillales RepID=A8YTU0_LACH4 Length = 283 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 84/254 (33%), Gaps = 9/254 (3%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101 + P P + +G G + ++ G +H N + ++ Y Sbjct: 27 NCGVEYCNPGWSYGPKRREYHFIHFVKEGKGTLTIE-GHTFHIHKNQCFIVPAGEVSLYA 85 Query: 102 CEG-LVWEQYWMEFTPTSMMDI------PVGQQSVIYNGEIYNQELTEVAELITSPEAIK 154 + W+ W+ F I + +Y Q++ ++ L + Sbjct: 86 ADKKDPWKYSWIGFLGIESSRYVQQLISNNNFVIDIKDAVLYEQQIRKIISLKHDSLSSA 145 Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 +I I + + + + + + D+A + + Sbjct: 146 -LKMTGITYEIFGSLIDEVNDTEEVKTTNSLATRAKHYMDLNYYDAIKIKDIANFLNVNV 204 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 L F +PK+Y + ++ A LL N++ VA+++ F DS FSK FK Sbjct: 205 NCLSSAFKEEFNLSPKQYLMKLKIRKAKKLLSTTNNTITVVANSVGFNDSLAFSKVFKQY 264 Query: 275 FGYAPSAVLKNTDQ 288 +PS+ K + Sbjct: 265 TQSSPSSYRKQATE 278 >UniRef50_B0MEA0 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEA0_9FIRM Length = 292 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 94/270 (34%), Gaps = 29/270 (10%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 + P P + + + Y V G G + +Q T+ + P ++ Y Sbjct: 20 CGIQECTPLYSFGPAVRSHHLLHYCVSGKGYYYAGD-KQYTIEPGDAFLILPDEVTFYQA 78 Query: 103 EG-LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNN- 156 + W W+ F+ + D + + +I + E ++ + +++ +N Sbjct: 79 DEQDPWTYLWVGFSGNQVNDYLQRCGLDSEHLICHCEEKELLVSYIEDILRHNTLSYSNE 138 Query: 157 -LAVAFLTKIIYQWICLMYADGKKD--PQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 L I + K D + I K I + + Q +V D+A + + Sbjct: 139 IYIQGILFLIFASFSRSADIKYKSDFTSENIHISKAIEFIQKNYQNVITVRDIADYVSLN 198 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 ++L +F +P+++ L R+ A LL V ++ + + + FSKAFK Sbjct: 199 RSYLCSMFQENLHMSPQQFLLRFRVTKATELLSDTDLPVKNISYSCGYANQLAFSKAFKK 258 Query: 274 -------------------KFGYAPSAVLK 284 G+ PS K Sbjct: 259 NYRFKSHGLPQRKPECSEYYTGFRPSQSRK 288 >UniRef50_B8FW52 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FW52_DESHD Length = 282 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 113/289 (39%), Gaps = 23/289 (7%) Query: 3 GKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW 62 G L+ S+ TP N+ + +I +G + D++Y V + S+ Sbjct: 7 GVLEGSEYYFFTPSNLAKSLFFYLICTG-------KFFCDQNYNVEREKYS-------SY 52 Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDI 122 + ++ V+G G + N T N +I L + H Y+ W W+ + ++ Sbjct: 53 LLMFVVKGQGTV-CYNDRIYTAKENDLIILNCHNPHRYYTNTE-WTTLWLHYDGNISKEL 110 Query: 123 P------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA- 175 G + N I + L + E + + L ++ +++ + + L Sbjct: 111 FDLIYDRFGCVISLSNLLIIPKYLNRILEDARAGSPLSEPLMSCYIQRMLSELLMLSDDF 170 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 + + + + IA + + +++ S+ +A+ + S R F + TG +P EY + Sbjct: 171 ILPESDKSDPVLEAIAFIETNFKEKLSLKVIASHVNMSSFHFARTFKKDTGYSPYEYVVK 230 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 RL+ A LLK+ + E+A F +F F + G P Sbjct: 231 TRLNHAKMLLKKTNLQIKEIAAECGFSTESNFVVNFHNNIGVTPGEFRN 279 >UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368B4 Length = 289 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 11/242 (4%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYW 111 + + +Y G + + NG +T+ ++ P + Y + E +W Sbjct: 40 TIRATGRPDYQLLYIASGKAEF-VLNGAAVTIPAGNMVLYGPGEYQQYTYLLEDRPEVFW 98 Query: 112 MEFTPTSMMDIPVGQQSVIYNGEI--------YNQELTEVAELITSPEAIKNNLAVAFLT 163 + FT D+ + + I Y + + P + + + + Sbjct: 99 VHFTGYEAADLLSRTGLSLEDFRILRTGCASRYQDLFLSMIRELQLPRPLSGDFSSLYFK 158 Query: 164 KIIYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFL 222 +++ + GK PQ ++++E + H + ++D AA++ S W R F Sbjct: 159 ELLLTVERQIAEGGKNKPQIQKEMEHAVHFFHENFSADIDISDYAASLHMSTCWFIRSFK 218 Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282 +Y G P +Y R++ A LL+ V E+ + + + +FS+ FK + G +P+A Sbjct: 219 QYVGVPPLQYLTSIRINKAKELLESTDCPVSEIGSIIGYENPLYFSRIFKKQTGLSPAAY 278 Query: 283 LK 284 K Sbjct: 279 RK 280 >UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVZ4_PAESJ Length = 288 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 99/265 (37%), Gaps = 22/265 (8%) Query: 30 GISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCI 89 G+ + A +Y V P + + + + G + GE + L + Sbjct: 24 GLWPLRTGRNIAKANYSV-------GPRVIECFSFHFVLNGSVTLSSM-GETVILPKGSM 75 Query: 90 IFLKPMDIHSY----HCEGLVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQE-- 139 L P HSY + + +W+ FT + I + + + + Sbjct: 76 FCLFPDVKHSYWITQYDSASPLKMHWLAFTGSQAEMLVRRIGLTEHKPYLRSRLTTELAN 135 Query: 140 -LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQ 198 L E + + + + L ++ + + ++ ++ + + Sbjct: 136 QLQACMERMKNWQKDGDLQLQMMLYQLFEMLSRPLP---EASEEKDWLKACLQYMQTHYA 192 Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADT 258 + SV D+A + L F + G +P+EY + R++ A+ +L+ + S+ +++ + Sbjct: 193 EGISVTDLAEWSGMHRSHLSSRFKQSFGISPREYLIMLRMERAVEMLQSRTLSITDISLS 252 Query: 259 LNFFDSFHFSKAFKHKFGYAPSAVL 283 L + D + FS+AF G +PS Sbjct: 253 LGYTDLYTFSRAFSTYTGMSPSNYR 277 >UniRef50_A5ZSJ3 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A5ZSJ3_9FIRM Length = 287 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 101/261 (38%), Gaps = 16/261 (6%) Query: 42 DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL---KNGEQITLHGNCIIFLKPMDIH 98 Y P P + N ++ Y + G G + + + + + ++P I+ Sbjct: 25 QYGYEKCEPLHSYGPFVRNHYLFHYIISGKGMLSVTEKDDNAVYHMEAHSGFLIEPGRIN 84 Query: 99 SYHCEGL-VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAI 153 Y + WE W+EF ++ + +++ I + ++ + + Sbjct: 85 LYSADQKFPWEYVWVEFDGLRAKELMEEAGLSNDHPVFH-PISDTAADKLRDEMLRLTQY 143 Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDP-------QRRQIEKLIATLHASLQQRWSVADM 206 +N + +Y + + R ++ ++ + + +V DM Sbjct: 144 PDNSRPLGIIGQLYLIMDALIQGSSNKKRLQGGKLSRFYAQEALSFIEQNYALPITVEDM 203 Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266 A ++ ++F G++P+++ + R+ A SLL S+G+++ + + + H Sbjct: 204 ANRCNLDRSYFGKVFKDMIGQSPQDFLIRYRMSKATSLLTSTSLSIGDISVQVGYPNQLH 263 Query: 267 FSKAFKHKFGYAPSAVLKNTD 287 FS+AF++ +G +P + Sbjct: 264 FSRAFRNIYGMSPRQYRQQNK 284 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 95/244 (38%), Gaps = 11/244 (4%) Query: 50 PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWE 108 P + +Y G G+ + G++ L ++ + P +H + Sbjct: 31 PNWFNIQHSHDFCEILYVAGGAGE-AILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPLR 89 Query: 109 QYWMEFT-----PTSMMDIPVGQQSVIYNGEIYNQE---LTEVAELITSPEAIKNNLAVA 160 ++ + + V+ GE + L E+ + +S ++ Sbjct: 90 LIFLAIRDFAVPGLPAGCLSQEKYRVLSCGEYRYKMDIYLRELLQETSSQIEFYQEISQG 149 Query: 161 FLTKIIYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 ++ ++ + L+ + + + ++ +K+ L + ++ ++ T+ S+ +L Sbjct: 150 LVSALLVLVMRLIRINPEDEAALSQECQKIKEYLDQNFTSPITLDSLSETVYISKHYLSH 209 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 LF TG +P +Y R++ A LL + V EV+ + + + +FS+ FK +G +P Sbjct: 210 LFKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISP 269 Query: 280 SAVL 283 Sbjct: 270 VKYR 273 >UniRef50_A0Y944 Transcriptional regulator, AraC family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y944_9GAMM Length = 272 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 19/280 (6%) Query: 18 IPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLK 77 + + +N ++ S + + ++++ + +Y G G + Sbjct: 1 MLDHLRQNPLTRACYPTSFGYYPYAKGHQMLRDDHS-------DNLLIYCEDGNGHVKTD 53 Query: 78 NGEQI-TLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQQS------- 128 + + +I L H Y + W YW+ F + Sbjct: 54 --KFYGPVTKGDVILLPSGHAHHYWASDDNPWTIYWVHFDGLQANQLIKELDFDAEQVVA 111 Query: 129 VIYNGEIYNQELTEVAELITS-PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIE 187 I + + + L S N A A +I+Y + + ++ Sbjct: 112 SIGQQPLLASDFNRLLSLRQSGYRQTVFNYAAALTRQILYFLALQIRSSNTLRRHNFNLD 171 Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247 +L + + +++ + MAA S + + TG +P ++++ +++ A LL Sbjct: 172 ELRSLMLENIEGDLDLDTMAACAQLSRHHFADKYKKLTGISPVKHFIHLKMERACYLLDT 231 Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 NS +V+ L + D +FS+ FK G +PSA K Sbjct: 232 SNNSAKQVSAHLGYTDPLYFSRLFKKVIGISPSAYRKGLR 271 >UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S939_9FIRM Length = 291 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 104/282 (36%), Gaps = 10/282 (3%) Query: 19 PLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKN 78 P + + S L ++ + + S++ YT++G G I Sbjct: 10 PESVWKRTTPSEAELAQPYYCTEAGVFYAQQHFSTAR-TDKESYILFYTLRGAGLIEQGE 68 Query: 79 GEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWMEFTPT--SMMDIPVGQQSVIYNGE 134 + L + L SY W YW+ + M+ + + + Sbjct: 69 S-HVVLSTGQALLLNCRTPQSYCTAPGQSCWHHYWVHLDGAGVAAMEPLLLPGKKLTPVQ 127 Query: 135 IYNQELTEVAELITSPEAIKNNLAV----AFLTKIIYQWICLMYADGKKDPQRRQIEKLI 190 + ++ E E++ ++ L +++ + A + R+ I + Sbjct: 128 LTGVKMQEYFEMLLGQMEHSTVDSMVTTGLALHEMLALCARSILAQAEATSARQVILQAA 187 Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250 TL + Q+ +AD+ A S+++ RLF RY G TP Y ++ R+ A LL + Sbjct: 188 ETLSKNYQKELYLADLLAEAHMSKSYFLRLFRRYMGTTPYNYLVNFRITQAKELLVLTDH 247 Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292 SV E+A + F D+ +FS F G +P K + Sbjct: 248 SVSEIAQEVGFGDASNFSTRFAKATGQSPLQYRKRALKPQEG 289 >UniRef50_D2Q7T6 AraC-type transcriptional regulator n=2 Tax=Bifidobacterium dentium RepID=D2Q7T6_9BIFI Length = 292 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 88/290 (30%), Gaps = 17/290 (5%) Query: 10 VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69 +++ Y +P + + ++A P P + + + + Sbjct: 1 MEHAQVYTLPSFCPFTSGHTDPPSSANGVSFAFCGISRTEPGHDVGPALRDHTIIHLVLS 60 Query: 70 GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQQS 128 G G++ + G L + ++P +Y W W+ G Sbjct: 61 GSGELHSQ-GAVFRLKAHDGFIIRPDSPVTYQACATDPWTYLWLGLGGNGAQRCLAGIGL 119 Query: 129 VIYNGEIYNQELTEVAELITSP----------EAIKNNLAVAFLTKIIYQWICLMYADGK 178 + + + LI S E N + + FL ++ A + Sbjct: 120 AHDRNAFHVGDTSAFLALIQSCFDYTSGSFADEIKLNAITLEFLHRLALAMATAGGATTQ 179 Query: 179 KDPQRRQIEKLI-----ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233 P + + + +V +A + + L R F TG T K+Y Sbjct: 180 SRPDDAGAGGALATAAAQYVAEHYAESINVGRVAEALHTDRSHLSRRFKSATGLTLKDYI 239 Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 + R+ A LL V +VA F FS+ FK +P+ Sbjct: 240 DNIRIAKACDLLSMTDMEVAQVARACGFSSLEVFSRKFKMARSVSPARFR 289 >UniRef50_B0MNH5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNH5_9FIRM Length = 295 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 85/253 (33%), Gaps = 7/253 (2%) Query: 39 TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98 Y R K+ S +YT +GCG + + N + L N ++L P H Sbjct: 39 FYLLGIGRTSPEFHVKRDKGLTSHQFLYTAKGCGVLEVGN-RKYKLEKNSFMYLPPELPH 97 Query: 99 SYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIY------NGEIYNQELTEVAELITSPEA 152 Y+ E W WM F + I + + + + L Sbjct: 98 EYYPENDEWNTCWMVFRGDFLKGIMNTMGFSGEMVATNADLNAFKKIFGRIYSLAADNLH 157 Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 ++ ++ + + + + ++ +++++A Sbjct: 158 NGEKCSLLIYNAVLAAKEIFGGKQEENNTGNLIADNAVRYINEHYSDDITLSELACLSGV 217 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 S + R+F P EY ++ A S+L SV +++ +L + +F FK Sbjct: 218 SPQYFDRIFRERLNMRPMEYIARVKISKAKSMLLDSDISVTQLSKSLGYTGPTYFGIVFK 277 Query: 273 HKFGYAPSAVLKN 285 G +PS KN Sbjct: 278 KYEGISPSEFRKN 290 >UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN84_9FIRM Length = 297 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 88/255 (34%), Gaps = 9/255 (3%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 Y P P+ + + + G G + + +G L + I Y + Sbjct: 44 GYEACAPGHHYGPIYRAYQLIHFILSGKGVLEI-DGHTFQLGAGDAFLIPSGKIAYYAAD 102 Query: 104 GL-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158 W W+ F + + + Q+ + E I S E Sbjct: 103 AADPWCYTWINFLGINSQMYTYQLIASSPEPYILRGLDTQKYHALIEQILSLEGTATARY 162 Query: 159 ---VAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 L +++ + D + + ++ L + ++ + ++A + Sbjct: 163 FKGNGLLLQVLGELFQDAGFDERYWGKNSVADETKFYLDVNYSEKLKLKEVAHNLGVHPN 222 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 +L R+F G TPK+Y L+ +L A LL+ V +A ++ F D FSK FK + Sbjct: 223 YLTRVFHEKYGVTPKQYLLNLKLQKACQLLRTTDLPVAVIAGSMGFDDGMAFSKLFKKTY 282 Query: 276 GYAPSAVLKNTDQHP 290 APS + P Sbjct: 283 SCAPSDYRRKEKAAP 297 >UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=Leuconostoc mesenteroides RepID=Q03WL4_LEUMM Length = 309 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 95/263 (36%), Gaps = 15/263 (5%) Query: 39 TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98 + + PL + ++ + ++G G N + TL ++P + Sbjct: 19 FFDFSGVSKTFSGHASGPLKRSHYLLHFVLEGQGTYFTMNHK-YTLKAGDFFLIRPDETI 77 Query: 99 SYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN-----QELTEVAE--LITSP 150 Y + W W+ T + + + ++ L + E +TS Sbjct: 78 FYQADLNNPWHYAWISIGGTETAQLIENFSPFRNHHDTFSCATVENYLKLIVESLTLTSH 137 Query: 151 EAIKNNLAVAFLTKIIYQWICL------MYADGKKDPQRRQIEKLIATLHASLQQRWSVA 204 ++I+ + + + P + +A ++ + S+ Sbjct: 138 RPQTELRLNQIASEILLLLMKENTWNVVEHQNATIRPMSEYTKLSLAYINNNFTYDTSIT 197 Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264 D+A I + ++L RLF R G +PK++ L R++ A LL+ S+ ++++ + F + Sbjct: 198 DIADAIKINRSYLSRLFRRDVGISPKKFLLRLRINEACQLLQTTQLSINQISEKVGFSNP 257 Query: 265 FHFSKAFKHKFGYAPSAVLKNTD 287 F +F PSA K Sbjct: 258 SVFGHSFTELIHETPSAYRKRRS 280 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 87/241 (36%), Gaps = 13/241 (5%) Query: 59 ANSW--VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFT 115 + + + +G G ++ G+QI + N +I + P H+ + + WE + Sbjct: 37 HSHYFSELFFVTKGTGYFQIE-GKQIPVQKNDLILINPNIPHTEFGNKEQPWEYIALGIE 95 Query: 116 PTSMM------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169 S+ L+ + + I + + + L I+ Sbjct: 96 GVQFQYSEKEAPYSYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQTICQNLLELILLSV 155 Query: 170 ICLMYAD---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226 + + R+ + ++ + ++ ++A + ++ +L F Y G Sbjct: 156 ARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTLSALVHINKYYLVHAFKNYKG 215 Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 +P Y + R++ A LL+ SV ++ + F +FS+ F+ G P+A K Sbjct: 216 VSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRLTGTTPNAYRKKK 275 Query: 287 D 287 Sbjct: 276 K 276 >UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivorax RepID=Q0VT12_ALCBS Length = 305 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 109/295 (36%), Gaps = 18/295 (6%) Query: 5 LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64 L + + P ++ + ++ + SG + +R+ ++++P + Sbjct: 19 LPARGQRTVIPPSVLSSVRDHPLCSGCMPHGVGFYPQASGHRM----ERQRPA---DNLL 71 Query: 65 VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP 123 +Y V G G++ G+ + ++ L H YH W YW+ + Sbjct: 72 IYCVSGAGELAYG-GQSQPVEAGDLLLLPAGFSHRYHANPQQPWSIYWVHLGGHEVQRYF 130 Query: 124 -----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC---LMYA 175 + + L E + + + + + ++ + LM Sbjct: 131 DEIAGQPDGGIRRVRVGVHSRLAEDFQALMAAATNAQPEHLVYAANLLRSLLAYASLMRR 190 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADM-AATIPCSEAWLRRLFLRYTGKTPKEYYL 234 + + ++ + L ++ +R S+ D+ AT S R + R TG+TP + + Sbjct: 191 QHQVRHATLDVTRVNSYLQTAIDRRLSLDDLITATSDLSRYHFIREYKRQTGQTPMQAFQ 250 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 ++ A LL +SV +A L D ++FS+ FK G +P K ++ Sbjct: 251 RIKVSHACYLLDISDDSVATIALQLGHDDPYYFSRLFKKMMGISPQKYRKERGKN 305 >UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYQ6_BACS4 Length = 294 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 118/290 (40%), Gaps = 15/290 (5%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 S ++ NET I +E VI + + + + Y H + D K N+++ Sbjct: 3 HSLNLPNET---IGFRTHEKVIGTLVDIHVVGKQYVHSH---DYYWDGMKRNDKNTFIFQ 56 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLK-PMDIHSYHCE-GLVWEQYWMEFTPTSMMD-- 121 YT+ G G + ++ G+ + L+ P + Y WE ++ + D Sbjct: 57 YTLSGEGAVFIE-GKTHKVQQGQGFMLEVPGEHIYYLPSHSHHWEFIFLTLRGQAAADCW 115 Query: 122 -IPVGQQSVIYNGEIYNQELTEV---AELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177 + I N I + + +V EL I + A + + + + + Sbjct: 116 RYVNRKVGPIINIPIESALIEQVVNVYELAFKKNLIDHYFASSKAYQFVMECYRYFKSFK 175 Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 K+ I + I ++ + + +SV D+A I S+ + +LF TP +Y R Sbjct: 176 AKEQMPDTITQAINFINKNYKASFSVQDVATNINLSKYYFIKLFKESMNMTPGQYITKVR 235 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 L+ A++LL +V E+A + + D +F+KAF+ G +P ++ Sbjct: 236 LEQAINLLSHTELTVKEIAMQVGYGDDNYFNKAFRKVVGTSPGEFRRSKH 285 >UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D1A4_PAESJ Length = 284 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 100/269 (37%), Gaps = 12/269 (4%) Query: 31 ISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCII 90 I + +Y ++P + W+ +YTV G G++ N +T I Sbjct: 10 IYNERPYGILIAGYYNETADYAIQRPSGSRDWLLMYTVSGEGQVQKNNQSTVTCGAGDIA 69 Query: 91 FLKPMDIHSYHCEGLVWEQYWMEFTPTS----MMDIPVGQQSVIYNG----EIYNQELTE 142 L P H Y +G WE W+ F P + +P + + + + + Sbjct: 70 VLMPGIPHHYGTKGTSWEFIWVHFIPDPEWSTWLRLPGSDERLFFRHVGKGDSRDSIHEA 129 Query: 143 VAELITSPEAIKNNLAVAFLTKIIYQ----WICLMYADGKKDPQRRQIEKLIATLHASLQ 198 +A ++ + ++ L ++ + +I +I +++ L S Sbjct: 130 LARMVRHETSAGSSRLHRRLAEMALEETLIYIQQTCPAESAVTMDPRIAQILRELQLSPA 189 Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADT 258 QR S+ ++A S + L LF G T RL+ A LL + E+A Sbjct: 190 QRISLPELAKKSCLSTSRLSHLFKEQVGDTVLNVLCKIRLEKAAQLLTGTNRQITEIASD 249 Query: 259 LNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 + F + +F++ FK FG PS + Sbjct: 250 VGFDCTIYFTRKFKETFGETPSTYRRREQ 278 >UniRef50_B8H8F4 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H8F4_ARTCA Length = 288 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 111/288 (38%), Gaps = 9/288 (3%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 +++ +N+ +P + + +S I+ + + + +P A + + Sbjct: 3 RATGFQNQRLVVVPRPLVRDALSRPITRHLV--VTDAGVFPAAADHGRHRPDGAAETIVI 60 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLKPM--DIHSYHC-EGLVWEQYWMEFTPTSMMDI 122 V G G + + + L + H+Y EG W +W + D+ Sbjct: 61 LCVAGAGWVETGGMRT-AVGAPAAVVLPGGTGEAHAYGAAEGDPWTIWWCHVRGADVPDL 119 Query: 123 PVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179 G + + + ++ + E+IT+ E ++ + + ++ + + D + Sbjct: 120 LEGAGVRGAQVIPLVAVDRLTAMLDEIITALEKDQSPARLMATAGMAWRLLTALAIDRRL 179 Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239 + +++ + L + +AD+AA + S ++L +LF TG ++ ++ Sbjct: 180 PEKGTPLQQAMNYLEERVDGSVRLADLAALVGVSSSYLSKLFREATGGGVLAHHTALKMA 239 Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 A LL + EV + D F+FS+ F+ G +PSA Sbjct: 240 RARLLLDTTDLPIAEVGREIGLQDQFYFSRQFRRLHGVSPSAYRAERK 287 >UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax=Clostridium perfringens RepID=Q0SUX5_CLOPS Length = 279 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 101/262 (38%), Gaps = 12/262 (4%) Query: 41 ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100 + P + + V Y +G G NG+ TL I L Y Sbjct: 18 DECGIEQGIPGLGYNYEVLKNAVIHYVTKGYGTFKF-NGKVYTLKQGDIFILLKGMQVEY 76 Query: 101 HCE-GLVWEQYWMEFTPTSMMDIPVGQ---QSVIYNGEIYNQELTEVAELI-----TSPE 151 WE YW+ F+ ++ + S + N + ++ + + +P Sbjct: 77 VASIDDPWEYYWIGFSGSNANEYLNRTSITNSCVANCKENSKIPQIILNMCEISKTYNPS 136 Query: 152 AIKNNLAVAFLTKIIYQWICLMYA--DGKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209 + L + L ++Y I + K I+ + ++++ +V ++A Sbjct: 137 KSDDILLLKELYSLLYTLIEEFPKPFEYKDKELHTYIQDALNFINSNYMHSITVQEIADY 196 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 + S ++L ++F++ G +P+ Y ++ R+ A LLK +GEVA ++ + DS FSK Sbjct: 197 VNLSRSYLYKMFIKNLGISPQRYLINLRMYKATLLLKGTKLPIGEVASSVGYSDSLLFSK 256 Query: 270 AFKHKFGYAPSAVLKNTDQHPT 291 F F +P N + Sbjct: 257 TFSKHFSMSPLNYRNNQVNKTS 278 >UniRef50_B0MR70 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR70_9FIRM Length = 290 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 101/287 (35%), Gaps = 21/287 (7%) Query: 21 LINENVISSGISLISLWHTYADEHYRVI------------WPRDKKKPLIANSWVAVYTV 68 L+ N S+G LI ++ Y W N A+Y Sbjct: 3 LLRYNDFSTGGELILKFYDYPIISKEGSLPVFLVSVGLNEWQYHVICGNGDNYAKALYCT 62 Query: 69 QGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPV---- 124 +G G + + NGE+ ++ F+ H Y+ W+ +W++ + S D+ Sbjct: 63 KGSGVL-IMNGEKHIINPYTAFFIPAGCPHEYYSTDESWDTHWIKPSGKSCTDMLKALGF 121 Query: 125 --GQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180 + + EI ++ + E + S + N A +L + L Sbjct: 122 DKPKIFPLPKEEITYLDRCFRCMHEALLSDKVDGNFRASGYLYSFFIELSRLAAKGKGSV 181 Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 + K IA + + ++ + ++ S L RLF + P EY ++ Sbjct: 182 QIAPAVTKAIAYIDENYMKQPGLESISKAAGVSSQHLCRLFRQTLNCRPMEYITKRKIQA 241 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 A LL + +V ++A+ F DS +F K FK PS Sbjct: 242 AKMLLAETRKTVEQIAEETGFCDSSYFCKIFKRFESITPSQFRNAEQ 288 >UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=C7H3E2_9FIRM Length = 306 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 96/242 (39%), Gaps = 12/242 (4%) Query: 58 IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWMEFT 115 + +Y G E++ + ++ +P +I Y + E E +W+ FT Sbjct: 64 GRRDYQILYVASGKAHFWFDGVEEV-VTSGHMVLYQPKEIQKYVYYVEDHP-EVFWIHFT 121 Query: 116 PTSMMDIPVGQQSVIYNG-------EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQ 168 + +I + Y ++ + E + + I++ Sbjct: 122 GYDVKNILNYHGIPLDKHVFYSGTLPDYKMLFRKIIRELQQCEYGYEDYIASLFNIILFL 181 Query: 169 WICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 K +IE +A + + + SV D A ++ S W R F +Y Sbjct: 182 VSRQQQESEKTTTSIPEEIEAAVAYFNENYNTKVSVDDYAESLHISTNWFIRNFKQYMKI 241 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +P +Y L R+ A SLL+ ++GE+A+ + + + +FS+ FK ++G +P+ KN + Sbjct: 242 SPAQYILSLRMVNAQSLLENTEYNIGEIAEIVGYDNPLYFSRVFKKEYGVSPAQYRKNLE 301 Query: 288 QH 289 + Sbjct: 302 ES 303 >UniRef50_Q5WK33 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK33_BACSK Length = 294 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 15/267 (5%) Query: 36 LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLK-P 94 W T D+ YR + ++ I V YT+ G G++ + G + F+ P Sbjct: 29 GWETQTDQAYRWDGTKRMEREKI----VFQYTLSGYGEL-VHEGTLYKVEAGQAFFVSLP 83 Query: 95 MDIHSYHCEGL--VWEQYWMEFTPTSMMDIPVGQQS---VIYNGEIYNQELTEVAELITS 149 Y+ E WE ++ + + ++ +++ + ++ + + +L Sbjct: 84 SAHCYYYPEEETEPWEFLYVTIEGKEALRLQKHMENKYGPVFSLQKDSEPIRRLFKLYAE 143 Query: 150 P---EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADM 206 E + + I + K+ + + + I + A+ + ++ ++ Sbjct: 144 TAAGEIQDSYTGSQKAYEFILSCFRFLEVPPKQV-VKEPLARAIRYIEANYARPLTLEEI 202 Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266 A S+ + + F TP Y R+ A SLL Q +++ EVA + D + Sbjct: 203 AQEAGWSKYYFIKQFKTELNITPMNYVTIIRIKKAASLLAQTDDTIAEVAYQVGMDDPNY 262 Query: 267 FSKAFKHKFGYAPSAVLKNTDQHPTDA 293 F+K FK G + S KN D H D Sbjct: 263 FTKVFKKTVGVSASKFRKNEDNHLIDY 289 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 10/275 (3%) Query: 24 ENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQIT 83 + +S + H Y P + + G G L+++ E Sbjct: 5 RHTFTSPLRHDHTCHLL-YSTYSKYEEDWSSYPHTHYFTELFFVLSGSGSFLVED-ETFP 62 Query: 84 LHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE--- 139 + + +I + P H+ E + + + + + ++ E+ ++ Sbjct: 63 IAKHDLIVINPNITHTEKSSLEDPLEYIVLGVDGLNFVIDDANEYLLFHSDEMKDRLDFY 122 Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP----QRRQIEKLIATLHA 195 + E + + + L ++ + + P + R+ + + + Sbjct: 123 FRTILEETENSQKDYEKVCQNLLNILVVHLSRYASSSVEIFPFHKMESRECSRAKRYIDS 182 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 S ++ ++ +A ++ + F G +P Y R+ + LL S+ ++ Sbjct: 183 SFRENITLDKLAEIAQINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQI 242 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHP 290 A F S +F++ F+ G P+A K ++ Sbjct: 243 AQQCGFSSSSYFTQCFRKSCGMTPTAYRKQFLRNQ 277 >UniRef50_A0QZE6 MmsAB operon regulatory protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QZE6_MYCS2 Length = 295 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 98/290 (33%), Gaps = 12/290 (4%) Query: 7 SSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVY 66 + + +P + ++ + + ++ L + + + A V + Sbjct: 10 ADGFVGQRMLAVPRPVVDHALGAPVTRRLL--VTDAGFFPRATRHGRSRSRGATEHVVMV 67 Query: 67 TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDI--- 122 G G + G + + L H Y E W +WM T + ++ Sbjct: 68 CTAGAGWCRTEEG-AFDVGVGDAVLLPKGRAHMYGAAESDPWTLWWMHVTGSDSAELIAA 126 Query: 123 ----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178 PV + + +++V +++ + A I Sbjct: 127 ARVSPVSPVVHLVDPAPATSLISQVIDMLADASTTAGLIGAAGAAWHALTVIAATGRQRS 186 Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 +++ + L ++ +R VA +AA + S + L LF + TG P E+ R+ Sbjct: 187 TGEADP-VDRALEHLRSTSPRRTDVAALAAIVGLSTSHLNALFRQRTGIGPLEFQQQLRM 245 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 A LL ++ VA F D +FS+ F G +PSA + Sbjct: 246 SRARELLDTTTLTIAAVARAAGFNDPLYFSRQFAKVHGQSPSAYRQRHQN 295 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 90/246 (36%), Gaps = 9/246 (3%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLV 106 WP K+ + + + G G + + + E + ++ + SY G Sbjct: 30 CWPEWKEFDYTVSYNKLYFILDGEGWVKIGDEELYPV-PGQLVLMPARTRQSYSVISGRP 88 Query: 107 WEQYWMEF-----TPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161 + +YW F + V + ++ + S + Sbjct: 89 YLKYWSHFSATVGDSDVFSWLNVPHCYDLSGNAEMPALFQQLVDAHRSDTLAARLREKSV 148 Query: 162 LTKIIYQWICLMYADGKKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 + I+ + D ++ K+ + L + ++ MA T+ + + Sbjct: 149 MLDILSRVFEHQQPQIHADKMEDMGRLHKVQQYIKNHLHEEITLEQMAGTLHLHPNYFIK 208 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 F R+ G TP++Y R++ A +L+ S+ E+AD F + +FSK F+ + GY+P Sbjct: 209 YFKRHFGITPQKYLSLKRMEQAKLMLRTTSLSIKEIADATGFESANYFSKTFRKEVGYSP 268 Query: 280 SAVLKN 285 S N Sbjct: 269 SEYRNN 274 >UniRef50_A9KKI4 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KKI4_CLOPH Length = 261 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 95/252 (37%), Gaps = 11/252 (4%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 + P I + ++ ++G G +G TL + P +I Y Sbjct: 9 SGWEECEAGHFFGPAIRHHYLMHIILKGRG-FYQASGHTYTLGKGQAFLIYPEEITYYQA 67 Query: 103 EG-LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 + W W+ F + + + I ++++ ++ +L+++ +N Sbjct: 68 DKKEPWIYAWVSFDGPDVEKLLDQTCFRMNRYVSPAIIRDRDVKKIQDLLSAFHQHDSNP 127 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 L Y+ + L Y + +K Q RR EK + + + + D+A + Sbjct: 128 ID--LEGCFYRVLALFYGETEKGTQQYERRYYEKAVEYIEQNYGYPLKIGDLAGYVGIDR 185 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 +L ++F+ + PK+Y RL A+ +L + SV E A + F D+ F K K Sbjct: 186 TYLYKIFMEFAKCAPKQYLQQFRLKEAMGMLSEGKFSVTEAAYSCGFHDAAAFCHVMKKK 245 Query: 275 FGYAPSAVLKNT 286 G P + Sbjct: 246 TGMTPLEFQASQ 257 >UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNA5_9CLOT Length = 282 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 94/256 (36%), Gaps = 12/256 (4%) Query: 43 EHYRVIW--PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100 HYR++ + W +Y +G G E+ + ++ P + Y Sbjct: 29 GHYRLLRLEKLHTVRIQGRRDWQLLYVAKGAGHFFRPREER--VKQGSVVVYPPGEPQDY 86 Query: 101 -HCEGLVWEQYWMEFTPTSM------MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI 153 + E YW+ FT + G + + Y + E+ + + Sbjct: 87 FYLLKEAPEIYWIHFTGERAEGLLEEWGLFHGHSCFVGEQDRYLRCFEEIIQELQLQPPG 146 Query: 154 KNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 L +++ + + +++ ++ + + +++ D A Sbjct: 147 FQRLCALRFEELLLSMGRQRLRLKNPQLAGDSLVTQVLNDMYKTYYRNYTIEDYAKRHNV 206 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 S WL R F + TG++P +Y + R+ A LL+ ++GE+A L + +FS+ FK Sbjct: 207 SVCWLIRRFKQVTGESPNQYLIQIRIRRARELLESSRLNMGEIASVLGYESPLYFSRQFK 266 Query: 273 HKFGYAPSAVLKNTDQ 288 G +P + + Sbjct: 267 QLQGVSPKRYREQRQK 282 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 35 SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94 ++ +Y W + + K + ++ + G K+ G L IIFL Sbjct: 11 EPYYPVVKFYYYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEG-SYQLKKGQIIFLDA 69 Query: 95 MDIHSYHCEGLVWEQYWMEFT----PTSMMDIP---------------VGQQSVIYNGEI 135 H + +EF+ T+ Q ++++ + Sbjct: 70 GTRHRLIV-SERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLLHDTDD 128 Query: 136 YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHA 195 Q L + + + + L++ + + L A + Q+ +++ +A +H Sbjct: 129 TYQCLRRLILEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKRALAYIHQ 188 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 + + SVAD+A ++ +L+R+F +TGK+ E+ + R++ A ++LKQ S+ ++ Sbjct: 189 NYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDISITDI 248 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 + +FS FK PS K Sbjct: 249 PHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280 >UniRef50_P43465 Raffinose operon transcriptional regulatory protein rafR n=9 Tax=Lactobacillaceae RepID=RAFR_PEDPE Length = 277 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 101/252 (40%), Gaps = 12/252 (4%) Query: 46 RVIWPRDKKKPL-IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104 P K + +S+V Y +G G N L I L Y + Sbjct: 23 EACLPNYTYKGNNVRDSYVIHYIQEGKGTFAAANHPATVLKAGDIFILPKGTPCFYQADN 82 Query: 105 L-VWEQYWMEFTPTSMMDIPVGQQSVIYNG-------EIYNQELTEVAELITSPEAIKNN 156 W+ +W+ F+ ++ + + +L+E+ +++ P ++ N+ Sbjct: 83 DQPWKYFWIGFSAGIRIEAMLSGSLLAQKCYLRQVQNGHIYADLSELYKVLHIPNSLIND 142 Query: 157 LAV-AFLTKIIYQWICLMYADGK--KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 + + + + ++ Y + AD K Q ++ L + ++ D+ + S Sbjct: 143 VLLGSLIYRLFYDLLRWYPADATNIKVKSTEQFNLAVSYLQENYSTGCTIMDLCHYLNLS 202 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 ++L LF + +P++ RL+ A L NSV +A+ + + DSF FSKAFK Sbjct: 203 RSYLYTLFKTHANTSPQKLLTKLRLEDAKQRLSTSNNSVQSIANMVGYKDSFTFSKAFKR 262 Query: 274 KFGYAPSAVLKN 285 G +PS K+ Sbjct: 263 YSGASPSYYRKS 274 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 104/297 (35%), Gaps = 31/297 (10%) Query: 17 NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76 NI E+ +SS + + T H +P + VY +G + Sbjct: 7 NILPKAWESFLSSSTFIPVIVKTIERFH----DTSWHMEPNKHECFEMVYIKRGKAVFEI 62 Query: 77 KNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWM------EFTP-------TSMMDI 122 G + N II +KP H + + E + F + +D Sbjct: 63 A-GYPAEIGPNDIIIIKPNQPHKFIVKSESGCEFIVLSFKFVNRFDGQYSDVSLENFLDF 121 Query: 123 PVGQQSVIYNGEIYNQ------ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 G+++ + +Q L + + +P+ L + ++ + + Sbjct: 122 VSGKETGPFITLKVSQKNDIIVLLNRILKERENPDIGSEFLNYLLVMELFVLISRALKME 181 Query: 177 GKKDPQR------RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 + + I+ + ++ + ++ S+ D+A + S ++ R F G +P Sbjct: 182 WENSIKNKSPKIKELIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPI 241 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 Y L R++ A LLK N + ++A ++ F + F+ FK P KN Sbjct: 242 NYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 97/287 (33%), Gaps = 28/287 (9%) Query: 19 PLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKN 78 L + S + I+++ + + P + + VY +G + + Sbjct: 5 LRLKEKVQHGSAVFPINVYEKI------FVHENNTLLPHWHDEFEIVYLEKGTASFRV-D 57 Query: 79 GEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSV--------- 129 G++ L +F+ IH E E Y + F+ + + Sbjct: 58 GKEYFLGPKQFLFVNCGSIHGGKAEDNP-EPYAIVFSLSMLFSEGPDICKSKYLQSVSER 116 Query: 130 ------IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR 183 + E + ++ + + L +L I Y Y + Sbjct: 117 KLLVQNSFEDEHTRELISNIITVWKEKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRE 176 Query: 184 -----RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 +I+ + ++++ + +A S+ + RLF T TP +Y R+ Sbjct: 177 LDLKLEKIKSALDFINSNYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRV 236 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + A+ L+K S+ E+A + F + +F K FK G P KN Sbjct: 237 EKAIELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKKN 283 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 88/276 (31%), Gaps = 26/276 (9%) Query: 35 SLWHTYADEHYRVIWP--RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFL 92 + Y P + + +G G + + + E + + Sbjct: 60 HAGRDFPFNIYPCSIPADFRQVPVHWHEDMEIIAVKKGRGVVTV-DMEPYEARAGEAVVV 118 Query: 93 KPMDIHSY-HCEGLVWEQYWMEFTPTSMMDI--------------------PVGQQSVIY 131 P +H C E + F P+ +M P+ + Sbjct: 119 FPGQLHGISQCGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLP 178 Query: 132 NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKL 189 + + + + + +L L + + + P R ++++L Sbjct: 179 DYGAFMECIGILDQLCGKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKSRERMKRL 238 Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249 + + ++ +V D A S + + F +Y G +Y + RL+ A +L Sbjct: 239 LEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTP 298 Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + V VA F + +F++ F+ K+G P KN Sbjct: 299 DPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_Q5WK82 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK82_BACSK Length = 297 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 109/288 (37%), Gaps = 18/288 (6%) Query: 6 QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65 + + T + P N+ + G + + Y D + K+ +S + Sbjct: 7 FTRGSHSFTFHLFPETGLLNLWNVGWEVQTDTSYYWDGN---------KRAKDNDSIIFQ 57 Query: 66 YTVQGCGKILLKNGEQITLHGNCIIFLK-PMDIHSYHCEG--LVWEQYWMEFTPTSMMDI 122 YT+ G G + + E+ T+ + + P D Y+ E WE ++ S+ DI Sbjct: 58 YTIAGSGVLEIG-KERYTVGQHQAFIVSVPSDHRYYYPENAKEPWEFIYISLQGASVQDI 116 Query: 123 ---PVGQQSVIYNGEIYNQELTEVAELITS--PEAIKNNLAVAFLTKIIYQWICLMYADG 177 + + I + + + + + + +++ A A+ Sbjct: 117 WQRLIQKSGPIVSLPPNSPLIRSLYSIYADTKADGLRDPYLAATQGYQFLIECFRAMAEE 176 Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237 + + ++ +A + A ++ + ++A + S L RLF + TP Y D R Sbjct: 177 RPQNEPYHYQRALAYIEAHYHEQICLDNIAEEVGVSRYTLTRLFKKQLHTTPISYVTDLR 236 Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + A SLL ++ ++A + + D +F K F+ G + + +N Sbjct: 237 MRKACSLLLHTNRTIKQIAADVGYPDDNYFHKVFRRYTGSSATQFRRN 284 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 88/249 (35%), Gaps = 21/249 (8%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS--YHC--EGLVWEQY 110 +P + + Y + G K+ + N + L + + P+++H Y E + Y Sbjct: 34 RPHYHSYYEIYYLLSGKCKMFI-NQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGIY 92 Query: 111 W--------MEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFL 162 + + Q E + ++ E+ + E ++ L Sbjct: 93 FSRDTVTSFLSLCGREAFGHIFSQPKRTIPSE-FRPKIEELLAQMQDEEKQGDSYCQIQL 151 Query: 163 TKIIYQWICLMYADGKKDPQRRQIE-------KLIATLHASLQQRWSVADMAATIPCSEA 215 +++Q + ++ + + +E + ++ Q+ ++ +AA S Sbjct: 152 CSLLHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSPT 211 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 + + F TG KEY R+ A +L+ SV VA F D +F F+ Sbjct: 212 YFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLT 271 Query: 276 GYAPSAVLK 284 G +P K Sbjct: 272 GVSPREYRK 280 >UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=Lactococcus lactis subsp. lactis KF147 RepID=A9QSR3_LACLK Length = 289 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 97/252 (38%), Gaps = 11/252 (4%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104 P P I ++V Y G G+ ++ G + L + Y + Sbjct: 21 EATIPNFSFGPAIRENYVIHYITSGSGRYMI-YGFEHQLKAGDCFIIPADVETFYQSDAL 79 Query: 105 LVWEQYWMEFTPTSMMDIP----VGQQSVIYNG---EIYNQELTEVAELITSPEAIKNNL 157 W YW+ + + D+ + + I + + +++ LI+ + + Sbjct: 80 TPWAYYWLGLSGHVVNDLFARTALDDKGWILENVSKTEFIEHFSKIQNLISDDDKTVDLD 139 Query: 158 AVAFLTKIIYQWICLMYAD--GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 L ++ I L K+ EK ++ + Q + D+ A + S A Sbjct: 140 IQVELFALMKSLITLFPKSITEHKNQSDYYAEKAYTFINQNYSQSIKIKDVLAHVMISRA 199 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 +L +F G +P++Y +D R+ A LL N V ++++ + F DS FS AFK ++ Sbjct: 200 YLFTIFKHKYGLSPQKYLIDLRMAKAAMLLIHSDNLVSQISEAVGFSDSLSFSSAFKKRY 259 Query: 276 GYAPSAVLKNTD 287 G +P+ Sbjct: 260 GVSPTKFKTQKH 271 >UniRef50_C6CWX0 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWX0_PAESJ Length = 275 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 99/269 (36%), Gaps = 11/269 (4%) Query: 26 VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85 I + + H+ D+++ + + + G G + + + E+ T+ Sbjct: 7 PILADSDRKLPIYVDIIGHWNNQETIDRQQ--GFPHYQWLQSTGGEGVLWIGD-EKYTVK 63 Query: 86 GNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQS------VIYNGEIYNQE 139 L P H Y+ W+ Y++ F + D+ + + E+ Sbjct: 64 PGQGFCLFPGVPHRYYAVRDPWDVYFISFGGSLAKDLLNQAGIKEPGLYSVTDSEMIVAH 123 Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR-QIEKLIATLHASLQ 198 L ++ + S L + + ++ + Q ++ +I + + Sbjct: 124 LRGISAMAESGLPFLGLECSKLLYLFLLDLMKVVQVSTQSAEQYYMRLNPVIRYIEEHID 183 Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL-KQQGNSVGEVAD 257 ++ D+++ I + +L RLF + G P EY R++ + L+ + + + E+A Sbjct: 184 SVMTIQDLSSRIGVTPQYLCRLFKQLMGMRPMEYVNRERINRSKELMFLGREHKMQEIAA 243 Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 + F + +FS FK G +P K Sbjct: 244 KVGFDSASYFSTVFKRMEGMSPEQFKKMH 272 >UniRef50_C6D174 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D174_PAESJ Length = 281 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 91/280 (32%), Gaps = 12/280 (4%) Query: 16 YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75 +P I I I + + + + V + + + + G G + Sbjct: 5 IFLPKPIFPRHICFPDF-IGGYSEFPE--HAVNREFATTENNLDRYYNLHIVLGGKGYLH 61 Query: 76 LKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQ------S 128 N L P +YH + W W+ F + G+ Sbjct: 62 TDNM-TYELTQGQGFLYGPGLRQTYHSDARDPWSIRWVHFYGARPEEFLDGKGLDEPWLF 120 Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIE 187 + + + + EL S E A + L +++ + + +I Sbjct: 121 HLPDLAPVEALMERLLELGRSYEVDDEYAAASTLYELLTRIQTTASQLNVSVHQTADKIR 180 Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247 + A+ Q +++ AA S + R F + GK+ ++ +AR+ A LL Sbjct: 181 AAANYVRANCNQPFTLEQAAAIAGYSSHYFSRKFNQTFGKSFSDFLTEARILRAKQLLAS 240 Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 SV +A F + +FSK F+ + G P + Sbjct: 241 TRLSVKLIALETGFSQTSYFSKCFRDQEGMTPLQFRERHQ 280 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 89/257 (34%), Gaps = 27/257 (10%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFT 115 + + +G + + + L IF+ ++HS Y G + F Sbjct: 36 HWHDELELLLVTEGTAVFRV-DLQDYELQAGEAIFVNSGELHSGYVVGGKPCSFDAVVFH 94 Query: 116 PTSM--------------------MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155 + ++P + G L ++ E+ + +A Sbjct: 95 SSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAASE 154 Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRR-----QIEKLIATLHASLQQRWSVADMAATI 210 L I+ + + L + P++ +++ +I + + + + +A Sbjct: 155 LTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELA 214 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 SE++ R F R T K+P EY R+ A S L+Q + EVA + F +F+ Sbjct: 215 RMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTV 274 Query: 271 FKHKFGYAPSAVLKNTD 287 F+ +FG P Sbjct: 275 FRQRFGCTPREYRSRLQ 291 >UniRef50_C6D3L8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L8_PAESJ Length = 274 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 91/239 (38%), Gaps = 7/239 (2%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYW 111 + ++P ++ ++G G++ + NG+ + + FL P HSY W+ W Sbjct: 31 ETERPEGFPDYLMQQVLEGFGEV-VVNGKAYKVEAGDVFFLYPDIPHSYKPLNQKWKVSW 89 Query: 112 MEFTPTSMMDIPVGQQSVIY-----NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166 + F + + + L ++ L + + L ++ Sbjct: 90 VSFNGREADQMLLFAGISESGTGRLKTNELIKPLEQMLTLAMDNDQEADLERSKLLYGLL 149 Query: 167 YQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226 + + D + +++ ++ + +LQ+ ++ ++A + +L R+F + Sbjct: 150 IDLKYQLLSPSYSDQEFDRVKPVLHYIENNLQRPLTLIELAGVATVTPQYLCRMFQQTMN 209 Query: 227 KTPKEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 P EY R+ + L+ + + E+A + F S +F F+ G P A K Sbjct: 210 IRPMEYINQQRIKRSKQLMFQHPAMRMYEIAGRVGFESSSYFGVVFRKLNGMNPEAFKK 268 >UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=Lactobacillus salivarius RepID=Q1WTL6_LACS1 Length = 278 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 11/257 (4%) Query: 41 ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100 A+ K P + ++ Y + G G + LH ++P +Y Sbjct: 20 ANVGRSDTLSGHKYGPAVRPYYLIHYILAGSGTFKT-DQSIYKLHAGQGFLIEPGQETTY 78 Query: 101 HCEGL-VWEQYWMEFTPTSMMD----IPVGQQSVIY--NGEIYNQELTEVAELITSPEAI 153 + W W+ F+ IP+ Q+ I+ N EL + L + Sbjct: 79 IADKNTPWSYVWIGFSGNFADQLMQQIPLNQREPIFSLNDPKRLIELVNLLLLKSVNSTT 138 Query: 154 KNNLAVAFLTKIIYQW--ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211 K L +++L + + ++ + +EK I+ ++ + S A +A I Sbjct: 139 KKLLNLSYLLEFLSIISNATIISRESTTSISDIYVEKAISLINKNFP-NISAASLAQMIG 197 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 ++L + F + TG T + Y + ++ A L++ S+ E++ + ++ F Sbjct: 198 LDRSYLGKRFKKVTGMTLQTYLKNYKITQARHLIESTNLSLLEISQRCGYQRVDSLARTF 257 Query: 272 KHKFGYAPSAVLKNTDQ 288 K +G PS + Sbjct: 258 KATYGLTPSDFRLQQKE 274 >UniRef50_A4XK77 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XK77_CALS8 Length = 273 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 101/248 (40%), Gaps = 10/248 (4%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105 + + + ++T++G G + + +G++ + N FL P H Y Sbjct: 24 SNEYQEHIIRKNGHPDYHYLHTLEGSGYL-IVDGQKYLVDENTAFFLYPGIAHEYFAATS 82 Query: 106 VWEQYWMEFTPTSMMDIP--VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163 W W+ F + I +G + + L + E I++ ++ N + + Sbjct: 83 KWSTIWLTFNGPASETILKTMGIRPFEIFKLTNKKYLEGMLEAISNKASVYNYIVSIECS 142 Query: 164 KIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 ++IY +I M+ + + ++ ++ ++ + + ++ S+ ++++ + S L Sbjct: 143 QLIYSFILHMFLNLQNKIEKNFENNYLKLLPVLQYIEENYKKAISLDEISSIVNLSPQHL 202 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 +F + TP EY + R+ A LL +Q + EV + F + +F FK G Sbjct: 203 CTVFKKTFQTTPYEYLIRVRIQKAKELLMRQSSIQIKEVCYEVGFKNPSYFCYMFKKLEG 262 Query: 277 YAPSAVLK 284 P + Sbjct: 263 ITPLQFKR 270 >UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bacteroides plebeius DSM 17135 RepID=B5CYP4_9BACE Length = 297 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 108/292 (36%), Gaps = 10/292 (3%) Query: 4 KLQSSDVKNETPYNIPLLINENVISSGISLISLWH--TYADEHYRVIWPRDKKKPLIANS 61 + + + K V + G ++I + + + + K + Sbjct: 3 NIPTHNFKYIINGRHDHNWGFTVQTVGSAIIHPNYESYPPICGHPTEFTFNPSKGRLLPI 62 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMM 120 +V +Y +G G E + + +I + P HSY + W++YW+ F + Sbjct: 63 FVQLYIAKGKGIFFSSPNESMEIKEGDLILIPPYTWHSYLPHKSTGWKEYWIGFDCPHIE 122 Query: 121 DIP----VGQQSVIYNGEIYNQELTEVAE--LITSPEAIKNNLAVAFLTKIIYQWICLMY 174 + + IY I ++ + E I + E +A + +I+ I Sbjct: 123 NCLKHNLFNKNKKIYRIGIQDKIINLYEEAIRIANEEKSGYQQYLAGIANLIFCMIPYYN 182 Query: 175 ADGKKDPQRR-QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233 + DP I K + L S AA I S +W R++F YTG TP +Y Sbjct: 183 NNRSFDPATEDIINKAKIIMKEELLNGISPEKTAAQIKLSYSWFRKIFKDYTGVTPSQYI 242 Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 + ++ A L + E+A L + D +F K FK G PS K+ Sbjct: 243 QELKMQEAKICLTTSHIQIKEIAYHLGYEDIAYFIKLFKRHTGKRPSEYRKS 294 >UniRef50_C6D787 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D787_PAESJ Length = 267 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 90/258 (34%), Gaps = 16/258 (6%) Query: 35 SLWHTYADEHYRVIWP--RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFL 92 + + Y P R K P + + + + + G G + N +Q L + Sbjct: 6 AFNSSQLICTYSGYKPANRHKWGPGVRDIYALHFIISGKGTLETNN-QQYPLSTGDSFMI 64 Query: 93 KPMDIHSYHCE-GLVWEQYWMEFTPTSMMDI-----PVGQQSVIYNGE-IYNQELTEVAE 145 P Y+ + WE W+EF + + V+ +V Sbjct: 65 FPKTEIYYYPDPEDPWEYVWIEFKGDEAKRLIAMTGLESDKPVVAACPADLKPYFPQVVG 124 Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQR-WSVA 204 + A L ++ ++ + + ++ + + + +V+ Sbjct: 125 --ADTRHFEKMRTEAQLRLLLSYYVEFYPREAQP---IDYVQLAKEYIMINYWRTTLTVS 179 Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264 D+ + ++L RLF +G + Y R++ A LL G S+ VA ++ + D Sbjct: 180 DIVNAVSLERSYLFRLFKEASGMSVSGYMTAYRMERARELLMSSGLSIKSVACSVGYKDQ 239 Query: 265 FHFSKAFKHKFGYAPSAV 282 +FSK FK Y PS Sbjct: 240 LYFSKVFKKATSYTPSEY 257 >UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG90_9FIRM Length = 298 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 96/255 (37%), Gaps = 11/255 (4%) Query: 41 ADEHYRVIW--PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP-MDI 97 + HY+++ + +P + +Y G K + L + P Sbjct: 26 SAGHYKLVHFPRFETTRPTGRPDYQLLYIASGIAHFQ-KGETYVPLPAGSAVLYHPNHTQ 84 Query: 98 HSYHCEGLVWEQYWMEFTPTSMMDIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIK 154 Y+ E YW+ FT + + YN I ++ ++ +I + K Sbjct: 85 FYYYSAEDSSEVYWIHFTGNRVSQYLSDWGVPDNDFYNVGINSRYISFFNHIIHEQQLKK 144 Query: 155 N---NLAVAFLTKIIYQWICLM-YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210 L +L +I+ M A + I K + LH + S+ D+A Sbjct: 145 ENYMELCKYYLIQILILMNRGMKEASAPYNNHVSIINKTVTYLHEHYNEPISIIDLAKEN 204 Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270 + W F Y G +P+ Y L+ R+D A L S+ +VA + D+F+FS+ Sbjct: 205 HLTPNWFNHCFQEYYGMSPQAYLLNIRIDKAKEFLTNYMLSISDVALLTGYSDAFYFSRI 264 Query: 271 FKHKFGYAPSAVLKN 285 FK K G +P KN Sbjct: 265 FKRKTGLSPQQYRKN 279 >UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8K8_9CLOT Length = 299 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 109/280 (38%), Gaps = 21/280 (7%) Query: 27 ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86 S L + YA + Y +S++ +YT+ G G I + +G +I ++ Sbjct: 24 TSLPFYLTEVGKFYAGKGYYTER-------SDKDSYLILYTISGRGSITV-DGNEIDIYA 75 Query: 87 NCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDI--PVGQQSVIYNGEIYNQELTEV 143 + +F+ Y E W W T + V V + E+ Sbjct: 76 HNAVFINCNSHQFYKTESDVPWVFLWAHINGTGVEPYYSLVNVGRVSQEKISDYADFVEL 135 Query: 144 AELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ-------IEKLIATLHAS 196 E I + ++ L+ + + + ++ ++ I + + + Sbjct: 136 FEEILITSKFNDVRTLSNLSVNLQRLLSIILKSRLSSSNNKKHESHIADIRSSVDYIRKN 195 Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256 +++ S+ D+ I S+ + RLF +Y G TP +Y ++ R++ A LL +G+++ Sbjct: 196 YKRQISIDDIIHRINISKYYFIRLFKQYMGTTPYDYLINYRINQAKILLNSTSMPIGDIS 255 Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKNT---DQHPTDA 293 + F D +F FK + G P+ +T + P DA Sbjct: 256 QEVGFLDESNFISHFKRQTGIKPTEYRNSTLGFHRPPKDA 295 >UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDD0_BREBN Length = 298 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 89/232 (38%), Gaps = 10/232 (4%) Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWMEFTPTSM 119 +V YT+ G G++ + + L ++ H Y+ E WE ++ + Sbjct: 55 YVFQYTISGSGRLDIGE-KSYPLRAGKTFLVEVPSCHRYYFSGESDHWEFVYITLVGSQA 113 Query: 120 MDIPV------GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM 173 + G I Q L ++ + + + A + + + M Sbjct: 114 TECWEYIQANGGPVLSIPPEAKLVQLLLKIYQEVCEKRVTDLYCSSAKAYEFVMECYRFM 173 Query: 174 YA-DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232 D +I + + + A ++ S+ D+A S +L LF Y TP +Y Sbjct: 174 KNIDNPSKQVPDRISEAVCFIQAHYKETISLGDIANAAGLSRYYLINLFREYLNTTPLQY 233 Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 R++ A+ LL Q SV ++A + + ++ +F+K FK G +P + Sbjct: 234 ITKLRIEKAMDLLTQTNLSVNDIALAIGYANANYFNKVFKKLIGTSPGQFRE 285 >UniRef50_C6D447 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D447_PAESJ Length = 292 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 93/285 (32%), Gaps = 19/285 (6%) Query: 12 NETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGC 71 ET + I+E I + T + Y P S+ +G Sbjct: 9 FETAEFLFHAISELDKQGSIWPVRGGMTETRQGYSA-------GPKRIESYSLHIVKEGF 61 Query: 72 GKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWMEFTPTSMMDIPVGQQSV 129 ++ +TL + L P ++Y+ W+ ++ Sbjct: 62 VRVEWDADNGVTLSAGDLFCLFPARTYTYYAIEGEKPPRMSWIVMDGPRAAEMLALTGIS 121 Query: 130 IYNG-------EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD-- 180 + + L + + + S E ++ + ++Y+ + + Sbjct: 122 CERPFLENAWTQEAERALLGLLDWMRSRETESAHVRSLDMQSLLYRLLAALCRTAPHAYA 181 Query: 181 -PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239 +++ ++ + + +V A + + F G P E+ R++ Sbjct: 182 LNATDWVKQSMSYIRQHATEGITVQQAAKAAGMNRTYYSVAFSEKVGMPPSEFITQVRME 241 Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 A LL + S+ EVA T + + F++ FK++ G P+A + Sbjct: 242 SAKRLLAETDASITEVAYTTGYSSLYAFTRTFKNRMGETPTAYRE 286 >UniRef50_C7G8V7 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8V7_9FIRM Length = 289 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 96/248 (38%), Gaps = 11/248 (4%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 + P I + ++ Y ++G G + + N + + +P + Y+ E Sbjct: 41 GRQNCKDMHAWGPGIRSCFIIHYVMKGAGYL-IVNHRKYHVKAGESFLTRPYTLIEYYPE 99 Query: 104 GL-VWEQYWMEFTPTSMMDIPVGQQSVIYNG-------EIYNQELTEVAELITSPEAIKN 155 WE W++F + + Q N E ++ E+ + Sbjct: 100 EENPWEYMWVDFLGNQVENWVEHTQFEEKNPVCSLKQEEKILPLFLKLLEMDIYHQQRNE 159 Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ-RWSVADMAATIPCSE 214 V +Y I + G+ D +++E + + + + + + + S Sbjct: 160 ACGVLLSILGVYLDIFPVECVGRSDEDEKRMEMAVLLIKNHYHKSEFHIQRLCEMLNISR 219 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 L RLF TG +PK+Y L+ R++ A LL+ SV A + F DSF+FS+ FK Sbjct: 220 VTLYRLFKSKTGISPKQYLLNYRIEQAKLLLRMGT-SVKNTAASCGFNDSFYFSRVFKEY 278 Query: 275 FGYAPSAV 282 G +PS Sbjct: 279 TGSSPSRY 286 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 190 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 109/269 (40%), Gaps = 13/269 (4%) Query: 33 LISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFL 92 L L + +Y P+ ++ I + +G G + + +G+ ++ + Sbjct: 14 LQHLQVHLEEAYYTQCSPQWRELDYIPSYNKFYLICEGEGWLNI-DGQDYRPVPGQLVHM 72 Query: 93 KPMDIHSYHCEGL-VWEQYWMEFTPTS-------MMDIPVGQQSVIYNGEIYNQELTEVA 144 + SY + +YW FT T ++IP + + + E+ Sbjct: 73 PAHVLQSYSAVSDRPYSKYWCHFTATMGEMDLFQWLEIPPILDISPDHTDSLTKLFRELV 132 Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR----RQIEKLIATLHASLQQR 200 EL + + A L +II ++ K P R +++++ A + A+L + Sbjct: 133 ELYQNRSYLARIREKAILLEIIALFLSHSDTHLKFVPGRLGEIERLKQIEAFIEANLSEA 192 Query: 201 WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLN 260 ++ +A + +L R F ++ P +Y R+ A SLL ++ E+A+ + Sbjct: 193 LTLEQLAKHVHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAKSLLGTTDLAIKEIAELVG 252 Query: 261 FFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 F D+ HF+KAF+ + +P+ ++ Sbjct: 253 FPDTNHFAKAFRKEASCSPTEYRHRAGRN 281 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 105/270 (38%), Gaps = 31/270 (11%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-- 102 ++ +D+ + + + + G GK + + + II L P H C Sbjct: 21 WKGTRLKDEARYHSHDFIEMAFILSGHGKYKIAD-RLYDVSEGDIIILNPGQKHQALCTD 79 Query: 103 EGLVWEQYWMEFTPTSMMDIPVG---------------QQSVIYNGEIYNQELTEVAELI 147 ++++ D P Q +++ Q+L ++ + Sbjct: 80 PSNPATEFFVGLCDVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAM 139 Query: 148 TSP----EAIKNNLAVAFLTKIIYQWICLMYADGK--------KDPQRRQIEKLIATLHA 195 + + + + ++L +++ + K ++ +++++ Sbjct: 140 SVENDVCRSGRYIMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFED 199 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ-GNSVGE 254 ++ S+ +A + S ++ R+F TG TP + ++ RL+ A LL+ S+ E Sbjct: 200 HYSEKISLDQIAENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQE 259 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 VA + + D +HFSK FK +FG PS + + Sbjct: 260 VAAKVGYDDVYHFSKLFKKRFGMPPSKIRR 289 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 100/276 (36%), Gaps = 27/276 (9%) Query: 34 ISLWHTYADEHYRVIWPRDKKK--PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIF 91 I + Y P D + + + +G G + + + ++ IIF Sbjct: 19 IHTPDDFPYNTYLCSIPLDFQSVNLHWHDEVEIIVIKKGSGIVSV-DLTTYSVSAGDIIF 77 Query: 92 LKPMDIHSY-HCEGLVWEQYWMEFTPTSMM--------------------DIPVGQQSVI 130 + P +H+ + + E + F + + +I + Sbjct: 78 VLPGQLHAISQKDNEIMEYENILFKSSLLKSSGYDLCNDKFIQPLFSGSLNICPVINNQT 137 Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK---DPQRRQIE 187 + E+ L A L +I+Y + + K ++I+ Sbjct: 138 PYYPPVITAINEIDHLCDLRPYAYQLSIKAHLFQILYTLVSNCGQNKIKPINQKSLKKIK 197 Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247 +++ + + Q+ ++ D+A S+++ + F G + +Y D RL++A LL Sbjct: 198 TILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAELLTT 257 Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 +++ ++A F + +F++ FK K+G +P Sbjct: 258 TTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 93/249 (37%), Gaps = 12/249 (4%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWME 113 + + Y QG + ++++ + L + I P HS+ + + + + Sbjct: 29 RSHYHEFFEIYYLEQGRRQHIIEDSQ-YILQPDEFIIFPPFVMHHSFEENDVPFRRLLLY 87 Query: 114 FTPTSMMDIPVGQ---------QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164 F P + + + + + ++ + + L + Sbjct: 88 FNPEVIRSPQILRTLSERARVYKLPRAQSAPIYNLMKDILQEQERDDLYSRELITLMVNA 147 Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 + Q + + + QR ++ +I LH + ++ +A S+ L R F RY Sbjct: 148 LALQLVRN-SDEAARPEQRNRVTDIINYLHEHFTEDITLEQLANHFYVSQYHLCREFKRY 206 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 T T +Y + R+ A LL++ S+ E++ + F + HF++ +K G +PS + Sbjct: 207 TSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMSPSQNKQ 266 Query: 285 NTDQHPTDA 293 + A Sbjct: 267 AYLKRGKPA 275 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 91/268 (33%), Gaps = 25/268 (9%) Query: 51 RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG---LVW 107 ++W Y V G +K+ + + ++ + +H G Sbjct: 25 FSMDGEHFHDAWEIYYLVSGERCYFIKD-QIYRIGAGDLVLIPVNVLHKTSPSGKLSQPH 83 Query: 108 EQYWMEFTPTSMMDIPVGQQSVIY--------------NGEIYNQELTEVAELITSPEAI 153 E+ + F + + G++ + ++ Q L + Sbjct: 84 ERILVNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLAEQKQQAGG 143 Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQR-------RQIEKLIATLHASLQQRWSVADM 206 L +++ + + A D + R+I ++ ++A + S++D+ Sbjct: 144 YEEYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLSDL 203 Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266 A S +L LF R TG T Y R++ A +LL++ V E+A + + H Sbjct: 204 ANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTH 263 Query: 267 FSKAFKHKFGYAPSAVLKNTDQHPTDAS 294 F + FK +P + + A Sbjct: 264 FGRVFKKAKAVSPQSYRREQRMLSGGAG 291 >UniRef50_C2EN40 AraC family transcriptional regulator n=2 Tax=Lactobacillus RepID=C2EN40_9LACO Length = 276 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 99/270 (36%), Gaps = 11/270 (4%) Query: 27 ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86 + + + P+ P+ + ++ G G +G+ L Sbjct: 6 WGFNNQSYNAQFYISSGGFEKPHPKHSYGPMGRSGYMIHCVTSGHGIFKS-DGKVYHLKK 64 Query: 87 NCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELT 141 I +++P + W YW+ F M I + ++ I + + Sbjct: 65 GDIFYIQPHKTTYMEADENDPWTFYWVRFIGNLVPKYMKRINLSYKNPIMSQQDLPTVFQ 124 Query: 142 EVAE--LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD---PQRRQIEKLIATLHAS 196 +V + + ++ + + I+ + ++ + + + Sbjct: 125 DVIDIVEYSQNSGPQDFYYQSKMFAILNALELHFPKENPHKNVTTTSDIYDRALRYIANN 184 Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256 +++ SV D+ + ++L R+F +++ P+E+ + RL+ A +LK + N+V VA Sbjct: 185 YEEQISVHDLVRYLNIDRSYLFRIFKKHSQTNPQEFITNYRLNKASEMLKSKENTVEYVA 244 Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 + F F + FK K+G +PS K Sbjct: 245 LSCGFLSYQSFFRFFKKKYGISPSDYKKKY 274 >UniRef50_A5ZYS8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZYS8_9FIRM Length = 304 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 107/279 (38%), Gaps = 10/279 (3%) Query: 21 LINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80 I ++ + + ++ + P ++ NS++ +YT++G G + G Sbjct: 21 SIRFINTATPRARQTFFYVQEAGDFCTSSPYFTEREN-LNSFLIIYTLRGKGLLKYH-GS 78 Query: 81 QITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM----MDIPVGQQSVIYNGEI 135 Q +LH ++ M+ H Y C + WE W+ F S + ++ + + Sbjct: 79 QYSLHPGTTAYINCMEHHHYECLQKQNWEFLWLHFNGPSALGYYEEFMRSNFHILDSLDP 138 Query: 136 Y--NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP-QRRQIEKLIAT 192 + + + + + L+ + I+ + + + ++ ++ Sbjct: 139 FFMESTMRRILSITQRKDIHSEILSSCLIINILTRILIENDTENLSLGFMPTYLKTVLKA 198 Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 + Q+ S+ +A S+ L R F +Y G P EY + RL+ + +LLK + ++ Sbjct: 199 IDQHFQEPLSLESLAIAAGVSKYHLAREFKKYIGMPPNEYLIVTRLNHSKTLLKYEDLTI 258 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPT 291 E+A + F H+ FK G P + + Sbjct: 259 EEIAYSCGFHQVSHYINLFKKHEGCTPLKFRREWHSNEA 297 >UniRef50_UPI000196AF05 hypothetical protein CATMIT_01210 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AF05 Length = 288 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 90/256 (35%), Gaps = 9/256 (3%) Query: 44 HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103 P++ + +V + G G++ + N + I + + +Y + Sbjct: 34 GIEQCKSEYTYGPIVRSYYVMHFVFSGKGQLTI-NEHSFDVKAGDIFLIPANKVATYQAD 92 Query: 104 -GLVWEQYWMEFTPTSMMDIPVG-----QQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 W+ W+ F + I + N+ ++ L+ Sbjct: 93 KNHPWKYGWVNFLGINAEQYFYSLTKDTHDQYIIHNVDVNKYYKQIERLLDLSFNTDAEY 152 Query: 158 --AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 + + L I + + + E++ L + Q ++++A Sbjct: 153 FESNSILLHIFAMLYEELNIHFNNNVKYSLAEEIRLYLDLNYQYNLKMSEIADKFGIHAN 212 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 ++ RLF + +PK+Y L +L A LL+ V +A ++ F D+ FSK F + Sbjct: 213 YMTRLFHQKFDISPKQYLLSIKLKKAAGLLQSTNLPVSTIAASVGFIDALAFSKKFSKTY 272 Query: 276 GYAPSAVLKNTDQHPT 291 +P+ K TD+ Sbjct: 273 HCSPTQYRKQTDEKKN 288 >UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=3 Tax=Enterococcus faecium RepID=Q3XWE2_ENTFC Length = 288 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 96/244 (39%), Gaps = 12/244 (4%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH-SYHCEGLVWEQY 110 K +S++ G G + NG++ L ++F+ + + E +W Sbjct: 44 HTSKRSGLSSYLCFLVESGSGTLEY-NGQKYMLQAGGMVFIDCLKPYAHESSEDDLWTLR 102 Query: 111 WMEFTPTSMMD----IPVGQQSVIYNG---EIYNQELTEVAELITSPEAIKNNLAVAFLT 163 W F M + ++ ++Y + + E+ + + +++ A L+ Sbjct: 103 WCHFNGIGMTEVYKKYLERGGQPVFRSAKFDLYAKLMMELHRIAEGQDYVRDMKINAALS 162 Query: 164 KIIYQWICLMYADGK---KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 +++ + + K +R +++ + L + ++ ++A ++ +L ++ Sbjct: 163 QLLILLMEDAWNPDKIPNMSTKRMELQNIKQYLDDHYTDKITMDQLSAEFFINKQYLHKI 222 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 F G T Y R+ A LL+ S+ E+A+ + D+ +FS+ F G PS Sbjct: 223 FRETYGITIVNYLNQKRITQAKHLLRFTNLSMEEIAEKIGMTDANYFSRTFFKVEGVRPS 282 Query: 281 AVLK 284 K Sbjct: 283 EFRK 286 >UniRef50_C7Q5G1 Transcriptional regulator, AraC family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q5G1_CATAD Length = 292 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 99/284 (34%), Gaps = 23/284 (8%) Query: 19 PLLINENVISSGISLISLWHTYADEH------------YRVIWPRDKKKPLIANSWVAVY 66 P E +S +++ T A+EH + + + + N + Sbjct: 9 PTAAGEEPWHPPVSEYAVYMTPAEEHRRLGLALYGAGWHTIAEHGIRWDARVLNCYALHL 68 Query: 67 TVQGCGKILLKNG--EQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDI-- 122 +G G I + ++ + +L P +HSY + W W F + Sbjct: 69 VTRGSGWIEWGDRPRTRLPIKAPAAFWLFPGLVHSYQPDVGGWTITWALFDGPAAAGYES 128 Query: 123 --PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180 + + S + + E+ + + ++++ I + +G Sbjct: 129 LDFLSRTSPVVPLGDARP-VRELFRELLTVVRTSGPHYEVSAGILVHRLITAVRDNGPGL 187 Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240 + + + L ++ D A + + LR TG TPKEY L RL Sbjct: 188 RES----RAVRALTEHATDPVALQDHATRLGLTVTQLREEVRLATGSTPKEYILRVRLSK 243 Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 A LL SV +VA + + D +F++ F + G +P+ + Sbjct: 244 AKDLLAATDQSVVQVARAVGYDDPAYFTRLFTQRVGLSPTMFRR 287 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 95/242 (39%), Gaps = 12/242 (4%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPM-DIHSYHCEGLVWEQYWMEFT 115 + + Y ++G ++ + GE L N + P HSY + + +++ + F+ Sbjct: 31 HFHDFFELYYLLEGE-RMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPFKRIVLYFS 89 Query: 116 PTSMMD----IPVGQQSVIYNGE-----IYNQELTEVAELITSPEAIKNNLAVAFLTKII 166 P + + + ++ +++ E L + I P + L ++ Sbjct: 90 PDLIANDTICQLLSEKELLFVNEGYIPNQILSLLLSLTHEIDVPGKYHDAYICNQLNGLL 149 Query: 167 YQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226 + L + K P+ R K + +H + SV +A + S L F TG Sbjct: 150 LNMLRLDFEAVKSIPKTRS-AKAVDYIHNHYMEDISVNQLAEILYVSPYHLCHEFKNATG 208 Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 KT +Y R+ A L+ + ++ +++ + F + HF++ FK G AP K Sbjct: 209 KTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFKKITGVAPREKKKLY 268 Query: 287 DQ 288 + Sbjct: 269 QK 270 >UniRef50_C0X7J7 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X7J7_ENTFA Length = 276 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 99/280 (35%), Gaps = 11/280 (3%) Query: 10 VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69 ++N N+ +LIN+ IS L + Y P + N WV Y Sbjct: 1 MQNVFTNNVSILINDQPISQEFHLY-------EAGYEKCRPTKPTEFAPINYWVLHYCSD 53 Query: 70 GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQS 128 G G E+ + + + + Y+ W +W+ F Sbjct: 54 GEGYFSTPFMEKQHITAGDLFMIPANCRNIYYPNRQNPWTYHWVGFVGDLSSQYLEKIGL 113 Query: 129 VIYNGEI---YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ 185 N + +++L + + I N+ + + ++ ++ ++ Sbjct: 114 TTENCILKGTVDKKLESLFKNIYQEAKKHNHFGSLSESFQLLNYLEHHSVTQHENQSQQL 173 Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245 ++ +H + S++ +A+ ++L +LF RY P Y + +L A SLL Sbjct: 174 FNQIKMAIHENFSNNLSISQLASEYNIDRSYLFKLFQRYEQTNPSIYVQNLKLQKACSLL 233 Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 ++ ++ E++ F +FSK F K P + Sbjct: 234 RKSSLTITEISFEAGFSSPSYFSKFFFQKKEMTPRQYRQQ 273 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 86/269 (31%), Gaps = 22/269 (8%) Query: 38 HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97 YA +PR P N +Y G ++ L +G + C + + Sbjct: 17 FPYACYRVTENFPRYNMIPHWHNECEIIYVRSGYFELFL-DGHTHRIDAGCCSLIIGGSM 75 Query: 98 HSYHCEGLVWEQYWMEFTPTSMM---DIPVGQQSVIYNGEIYNQEL-----------TEV 143 H + F +++ I I N E V Sbjct: 76 HG-GTPKDNCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSADSEPAKDAKAV 134 Query: 144 AELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKL------IATLHASL 197 + + E L ++ + + I+K+ I+ + + Sbjct: 135 IDAMLEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIEQNY 194 Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257 ++ ++ ++A + + R F YTGKTP EY R++ A L+ + ++A Sbjct: 195 RKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAM 254 Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 F D +F K FK G P + + Sbjct: 255 KCGFNDYSYFIKVFKSMKGVTPRDYCRRS 283 >UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG84_SANKS Length = 297 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 94/289 (32%), Gaps = 13/289 (4%) Query: 7 SSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVY 66 + P + ++ ++ L + + + A V + Sbjct: 14 RDGFAGQRMLVTPRSLVREALTLPVTSRLL--VTDAGVFPHAARHGRSRVSGAEQHVVLV 71 Query: 67 TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPV- 124 G G G ++ + + L + H Y + W +W ++ Sbjct: 72 CTDGAGWCRTPAGTEV-VGRGDAVLLLAGEAHEYGADAEDPWTLWWFHVLGGDAAELVSA 130 Query: 125 ------GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178 G + + + +++V + + + A + Q + Sbjct: 131 GHQASGGPVAHLRDAAPVASLVSQVIDGLDAGTRAGTLQATGAAFHALTQVVATGRRSPG 190 Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238 P +E+ + L A+ +R VA +AA + S + L LF + G +P Y R+ Sbjct: 191 --PSLSPVERALEHLRATSPRRTPVASLAAMVGLSTSRLGALFREHVGVSPNAYQSQLRM 248 Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 A LL +V VA F D +FS+ F G APSA T Sbjct: 249 ARARELLDSTDLAVAAVASACGFDDPLYFSRQFARVHGVAPSAYRGRTR 297 >UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQC9_CLOCL Length = 275 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 92/242 (38%), Gaps = 10/242 (4%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYW 111 + + + +G G + + N + IT++ N + L P H Y+ W W Sbjct: 31 HIIRLKGYPHFQWIQCRKGSGMLKINN-QTITINENQAMLLFPHTSHEYYSSSEEWIVDW 89 Query: 112 MEFTPTSMMDIP------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI 165 + ++ +I + + E++ + ++ EL S IK+ + + I Sbjct: 90 VALNGYAVEEILKNGGIQHSEVFSVSEPELFILRMEKLLELAASYNTIKSLESSKIIYSI 149 Query: 166 IYQWICLMYADGKKD--PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 + + D Q ++ ++ + + + ++ D++ + +L +F + Sbjct: 150 LMDILAYTSTDKVDYMINQYSKLRPVLDYIDDNYDKIITLQDLSEVANVTPEYLCTVFKK 209 Query: 224 YTGKTPKEYYLDARLDLALSL-LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282 TG EY + R+ + + L ++ + E+A F D +F FK P+ Sbjct: 210 TTGIRVFEYINNIRIKNSKEMILSKKNMPIKEIAKNSGFEDVSYFCSMFKKIEKLTPNEF 269 Query: 283 LK 284 K Sbjct: 270 RK 271 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 89/241 (36%), Gaps = 10/241 (4%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFT 115 +Y V+G G + ++ + + +I + P +H+ + E + Sbjct: 33 HSHPFAELMYVVRGSGYFRFADNLKLPIQADDLIIINPNVLHTECSDAEGGLEYIVLGID 92 Query: 116 PTSMM-DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI---- 170 + I+N E Y E+ + I + ++ + ++ + Sbjct: 93 GVEFYTEQNAHPGVSIHNYEDYKHEILFYIKAILEAGKTHDEMSELIVENLLRVLVLNTM 152 Query: 171 ----CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226 L+ + + L L+ ++ ++ +A+ ++ +L +F TG Sbjct: 153 RRTTSLLDVETSTGGDNKDCIFLEHYLNLHYRENITLDHLASLTFLNKFYLSHIFKEQTG 212 Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 +P +Y L R+ A LL S+ +++D + F +FS+ FK+ +PS+ Sbjct: 213 LSPIDYLLRKRMIEAKKLLINTDLSITQISDIVGFRSPSYFSQFFKNMECMSPSSFRNKH 272 Query: 287 D 287 Sbjct: 273 K 273 >UniRef50_C8Q370 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q370_9ENTR Length = 293 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 94/253 (37%), Gaps = 15/253 (5%) Query: 51 RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV--WE 108 +P ++ T++G G I GE + ++ P +H Y W+ Sbjct: 41 FFIHRPEGMKGYMLNLTLKGEGVIRHAEGE-FHCVADEMLLFPPGVLHHYGRAKESPAWD 99 Query: 109 QYWMEFTPTSMM-----------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 W+ F P +I + + + +V + E + L Sbjct: 100 HLWIYFIPRPYWIDWLHWDRTEGNIGRMPLGSSADSQQIANQFKDVIRWNAASEPLAEAL 159 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 A+ L +II + A ++ + +I+ + L+ L + + D+A S + L Sbjct: 160 AMNTLERIILELFQRQPASNHRN-RDPRIQTVCHYLNEHLAEDVRIDDLARMTYLSSSRL 218 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 +F + G T + R+ A LL+Q S+ ++A + + D +FS+ F Sbjct: 219 THIFRKEMGNTIFGWRESQRISRACDLLQQTQLSITQIARAVGYEDPLYFSRIFSQHRHL 278 Query: 278 APSAVLKNTDQHP 290 +P K D+ P Sbjct: 279 SPREYRKKFDRIP 291 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 100/255 (39%), Gaps = 25/255 (9%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWME 113 + + G GK + +G+ + I L P H ++ ++ Sbjct: 32 YHAHDFIEFAVIMGGKGKFYI-DGKDYEVEEGDFILLNPGTYHRSKAGYSKEGLKECYIA 90 Query: 114 FTPTSMM-------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166 F+ S G +I + + + ++ ++ + L + Sbjct: 91 FSGVSFKGCKSGYFPSFKGNGKIIKMADRMKKNIFQICTVMNKEARECSAGRYFMLKAYL 150 Query: 167 YQWICLMYADG--------------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 Q +CL+ + + ++ +++++ + + +++ S+ +AA + Sbjct: 151 IQILCLVVREQKEEKQEGEGKGYIFQSTGKKYVVQQIMKYMEENYREKISLEQIAANMYL 210 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLK-QQGNSVGEVADTLNFFDSFHFSKAF 271 S ++ ++F TG TP Y + R++ A +L+ + EVA + + D++HFSK F Sbjct: 211 SSFYIAKIFKSETGDTPINYLIRLRMEKAKEILEISPEEPIKEVAAAVGYSDAYHFSKLF 270 Query: 272 KHKFGYAPSAVLKNT 286 K +G +P K++ Sbjct: 271 KKHYGISPLYYKKDS 285 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 94/247 (38%), Gaps = 8/247 (3%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWMEFT 115 + Y G + + + L+ I P HSY G+ +++ + FT Sbjct: 23 HYHEYFELYYLESGK-RYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKRLVLYFT 81 Query: 116 PTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPE--AIKNNLAVAFLTKIIYQW 169 + + Q + +Y + N+ + L+ E + A+ F+ I Sbjct: 82 KEMIAVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSEEALYFILNQILIL 141 Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229 + + K ++ +I +I LH + ++ ++A S +L R F +YT T Sbjct: 142 LLRNSTETAKPEKQSRITSIIHYLHENYTYPITLNELAEQFYLSPYYLCREFKKYTNSTI 201 Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 +Y R+ A L + SV E++ + F + HF++ ++ G +PS K + Sbjct: 202 VQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKSRKQAKER 261 Query: 290 PTDASPH 296 H Sbjct: 262 SAAMERH 268 >UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DM00_9BACT Length = 282 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 121/288 (42%), Gaps = 28/288 (9%) Query: 2 NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61 N L ++ E PY + E V+SS K + Sbjct: 12 NTNLFFKNINFELPYKLLNFGRERVVSSDYR------------------WHGLKRGKLET 53 Query: 62 WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE--GLVWEQYWMEFTPTSM 119 + YT+ G GK+ N T+ + + + D H Y + WE ++ F T + Sbjct: 54 AIWQYTLSGSGKLRSNN-TTYTIQPHQAMLVTSPDDHEYFFDSMDSHWEFIYLSFCGTDL 112 Query: 120 MDI---PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176 + + + S + + I ++ ++ +L +P + V +++ YQ+I ++ + Sbjct: 113 VQHYKNLIAKTSPVCSLPINSKLISLFLQLTQNPHLSDSQTQVQH-SQLCYQFIMELHQE 171 Query: 177 ---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233 K+ P + I+ ++ ++ L Q S+ +MA+ S R+F + G +P EY Sbjct: 172 ILADKQKPLPQAIQNVLNHINHHLNQAISIDEMASVAKLSRYHFSRVFSKAIGISPNEYL 231 Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 + +++ A LL Q SV ++A + D +F K FK FG++P A Sbjct: 232 IKTKMEYAQKLLFTQNLSVKQLAHECGYHDPSYFCKVFKKHFGHSPKA 279 >UniRef50_O33813 Lactose operon transcription activator n=4 Tax=Staphylococcus RepID=LACR_STAXY Length = 279 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 90/237 (37%), Gaps = 14/237 (5%) Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121 V QG G GE L I L+ Y W YW+ +++ Sbjct: 40 VLHIVTQGEGTFSYA-GETYHLTAGDIFLLERGMEVEYKPSFSNPWTYYWVGMNGKQILN 98 Query: 122 IPVGQQSVIYNGEIYNQELTEVAELIT---------SPEAIKNNLAVAFLTKIIYQWICL 172 + S++ + I Q+ T++ +I + L + +L +++Y Sbjct: 99 YL-SRCSIVDSHVILGQDTTDIKNIIQLICKLSQSIESNNSNDILIMQYLYQLVYTLQEK 157 Query: 173 MYA--DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 + D I+ + ++ + Q+ +V D+A ++ + + L +LF + G +PK Sbjct: 158 FPKIFSVQVDIVNEDIQHAVDFINTNYQKHITVEDVAKSVNITRSHLYKLFKKNLGCSPK 217 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 EY R+ A LL + +++ + + D FSK F F + S + Sbjct: 218 EYLTYIRMYHASQLLIHTSTLISDISRQVGYKDPLLFSKNFTKHFEISASEYRHHFS 274 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 26/273 (9%) Query: 38 HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97 + Y+ Y ++G + + E I + IF+ D+ Sbjct: 20 FPFGAYWYQFAPGAHVVDSHWHKEAEIFYVMEGEVLFQI-DSEYIPVRAGEAIFIDGGDL 78 Query: 98 HSYHCEG-LVWEQYWMEFT------------------PTSMMDIPVGQQSVIYNGEIYNQ 138 H+ H +G M F P ++ E + Sbjct: 79 HTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQERRAAFPRRMTSGTDERLLE 138 Query: 139 ELTEVAELITSPEAIKNNLAVAFLTKIIYQ------WICLMYADGKKDPQRRQIEKLIAT 192 + E+ L A L +++Q ++ + +++K+I Sbjct: 139 HIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSRSEAADMTRTERLKKVILY 198 Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 + + + ++++A IP SE R F TG+TP +Y R+ A LL+ N + Sbjct: 199 IQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQAAELLRSPDNKI 258 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 ++A + F +F + F+ PS K Sbjct: 259 SDIALDVGFGHISYFVRVFRKIMNCTPSEYRKK 291 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 94/246 (38%), Gaps = 12/246 (4%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQY 110 + K + + Y +G + + +H + P HSY E + +++ Sbjct: 19 NMSKSHYHDYFELYYLEEGE-RFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRL 77 Query: 111 WMEFTPTSMMDIPVGQ---------QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161 + F+ + + + + + ++ ++ L ++ + P+A + Sbjct: 78 LVYFSKEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYIHTL 137 Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 L + + K +R +I +I+ +H + Q+ S+ +A S +L R F Sbjct: 138 LNMALLTIARNIQTPVKP-EKRNRITDVISYIHQNYQEDISIDQLAQMSYVSPYYLCREF 196 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 RYT T +Y R+ A + + ++ E++ F + HF++ FK G PS Sbjct: 197 KRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMTPSN 256 Query: 282 VLKNTD 287 K Sbjct: 257 FRKMYK 262 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 104/300 (34%), Gaps = 35/300 (11%) Query: 7 SSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVY 66 + E N P +N S + H+ + + +Y Sbjct: 11 GESMYFELKENKPHGTKDNPFSIYHIENAGRSFQIPVHW-------------HDEFEIIY 57 Query: 67 TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY-------WMEFTPTSM 119 G + + +GE + P ++H + + + ++ F M Sbjct: 58 VKSGLLTVSI-SGESYIGKAGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDM 116 Query: 120 MD----IPVGQQSVIYNGEIYNQELTEVAELIT-----SPEAIKNNLAVAFLTKIIYQWI 170 +D P+ ++ N + + +LI + E A I+ Q+I Sbjct: 117 LDDKLLEPLNSGHLMINPRVKDSAKELCEQLIDIYMAENDETESKITAQIKTKIILLQFI 176 Query: 171 CLMYADG---KKDPQRRQI--EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225 M+ G + D R I +++++ + + + S+ + SE ++ R F + Sbjct: 177 LEMWKKGFVIENDTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHF 236 Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 T +Y RL+ A LL+ SV E A + + +F ++FK +G +P + Sbjct: 237 HITLSQYITYLRLENAKQLLQDTDLSVTETAMQSGYQNVSYFIRSFKKAYGISPLKYRNS 296 >UniRef50_UPI0001788A2C transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A2C Length = 284 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 93/278 (33%), Gaps = 14/278 (5%) Query: 20 LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNG 79 + G + P + P + + +G ++ +G Sbjct: 7 EYAEFIYYTPGYLDKEAQIWPVRAGRSLAKPNYRVGPKRIECYSLHFVHEGTVRLEF-DG 65 Query: 80 EQITLHGNCIIFLKPMDIHSYH--CEGLVWEQYWMEFTPTSMMDI----------PVGQQ 127 +++ L N + L P + YH W+ + + + P G+Q Sbjct: 66 KRVDLQKNDLFCLFPGRTYYYHLLPSDAPLRMSWLALDGSRVRPLLELAGLVPESPFGRQ 125 Query: 128 SVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIE 187 + E + + + + + + + ++ + A + I Sbjct: 126 MISSRVEKSAECVIDALAGVERWKPSVSLELHGLVYGLLAGMVPDA-ASAEPTELAGWIN 184 Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247 + + + + SV +A ++ +F G P +Y R+D A LL + Sbjct: 185 ECLDYMELHATEGISVQQVAEFAGVHRSYFSNMFTSQVGMPPLKYLQRIRMDKAKRLLTE 244 Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 ++ E+A +L + + + F++AFK F P + +N Sbjct: 245 TDATITEIALSLGYPNLYSFTRAFKIYFKVPPITMREN 282 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 92/255 (36%), Gaps = 25/255 (9%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFT 115 N + +G G + + N T++ ++F+ P +HS + + E + F Sbjct: 39 HWHNEVELIVIKKGQGLVNV-NLVTYTVNAGDVVFVFPGQLHSISQKDYSIMEYENILFK 97 Query: 116 PTSMM--------------------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155 + + +I S + + E+ +L Sbjct: 98 SSLLKSSGYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQ 157 Query: 156 NLAVAFLTKIIYQWIC---LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212 ++L +I Y I L +I+ +++ + Q S+ ++A Sbjct: 158 LAVKSYLFQIFYLLISNCGLNQIKPISKKALEKIKTILSYVAEHFQDNISIEEIAGHCFY 217 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 S+++ + F G + +Y D RL++A LL + + +A F + +F++ FK Sbjct: 218 SKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFK 277 Query: 273 HKFGYAPSAVLKNTD 287 K+G P K+ Sbjct: 278 KKYGITPGKYRKDAR 292 >UniRef50_C7T9S5 Putative transcriptional regulator n=2 Tax=Lactobacillus RepID=C7T9S5_LACRG Length = 284 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 104/272 (38%), Gaps = 9/272 (3%) Query: 21 LINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80 + EN ++ + + Y + PR + + ++ + +QG G + N E Sbjct: 1 MFKENKWLRTDRIVCPELSVFEVGYEDVHPRAPYQYEQLDYYLLHFVLQGEGLFFINN-E 59 Query: 81 QITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEI 135 L + P ++Y+ G W W+ D +G+ + IY + Sbjct: 60 IHQLSRGQGFLIPPHTDNNYYPLVGNPWSYRWIGVRGPGAAAVFNDAGLGKTNFIYQHQD 119 Query: 136 YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD--PQRRQIEKLIATL 193 +Q AE A+ +I+ + + + P ++ + + L Sbjct: 120 IHQMDDLFAEAYDYFSRDHLYGALGKFYEIVSALVDDYQQETRLGVLPNQQYALEAVEIL 179 Query: 194 HASLQQR-WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 + D+A + +L R+F+R G +PK Y + R++ A+ LL+ +++ Sbjct: 180 KREYADSTLRIDDVAERVKVERTYLYRIFMRNLGVSPKSYLMQLRINQAIELLRNTNDAI 239 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 G++A + F FSKAF PSA K Sbjct: 240 GDIAIKVGFTSYSQFSKAFVKARRMTPSAFRK 271 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 90/255 (35%), Gaps = 19/255 (7%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104 + P + P Y +G + L+N E I+ N ++ + H++ Sbjct: 31 FVSFRPFETFGPHKHLRIEINYVKKGNCILHLEN-ESISFSENEMMVICSNVEHTFEAGS 89 Query: 105 LVWEQYWMEFTPTSMMDIP------------------VGQQSVIYNGEIYNQELTEVAEL 146 +EF P + I N + + + Sbjct: 90 EDTTLMQLEFLPEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVNE 149 Query: 147 ITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADM 206 + L V + +++ + ++K I+ + + Q +++D+ Sbjct: 150 MNQKSKYYQYLVVMYYAELLILIYRYLDEAYLPICTNDSLKKAISYIRLNYQSDITISDV 209 Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266 A+ E +LR+LF +Y +P +Y R++ A+ LL+ SV EV F + Sbjct: 210 ASQTGVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQSPQY 269 Query: 267 FSKAFKHKFGYAPSA 281 FS+ FK + G +P Sbjct: 270 FSRIFKQQMGISPRE 284 >UniRef50_Q6PU53 BgaR n=2 Tax=Bacillus megaterium RepID=Q6PU53_BACME Length = 275 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 97/260 (37%), Gaps = 12/260 (4%) Query: 36 LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPM 95 ++ + +R +++ + + ++G G++ + N E + N +FL Sbjct: 17 PFYVTSAGSWRHQTHINRQGE--FPDYQWIQCIKGRGELHV-NDEVYIIKENEGMFLTRH 73 Query: 96 DIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQS------VIYNGEIYNQELTEVAELITS 149 H Y+ W+ W+ F + M DI + Q V+ N E + L E+ + Sbjct: 74 VPHEYYPVTSEWQVCWVSFNGSVMDDIMLSLQFINSGKIVLTNAESLYRMLQELMNRLEE 133 Query: 150 PEAIKNNLAVAFLTKIIYQWIC--LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMA 207 L +I + + + Q Q+ ++ + Q ++ +A Sbjct: 134 NHTFSTMQCSELLYSVILKLRQDSVYIESKSRLQQITQLNPVLRYIEEYYHQPLTLEVLA 193 Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS-LLKQQGNSVGEVADTLNFFDSFH 266 + +E + LF + G P EY R+ A LLK SV +VA + + + Sbjct: 194 QQLSVTEQYTCLLFQQSLGIRPFEYVTRVRIQKAKKLLLKNNQISVQDVARQVGYEHPSY 253 Query: 267 FSKAFKHKFGYAPSAVLKNT 286 F K FK + P+ K Sbjct: 254 FIKRFKEQENVTPTIFRKMY 273 >UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-like protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A4H9_9BACT Length = 307 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 113/305 (37%), Gaps = 31/305 (10%) Query: 10 VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69 V TP +P ++ + +A+ ++ + P + N + V Sbjct: 6 VNLNTPARLPGILTVQQPEGPYYGRVI---HAESNHYTPPQSRRSPPFVHNHYHIVLVTA 62 Query: 70 GCGKILLKNGEQITLHGNCIIFLKPMDIHSY---------HCE----------GLVWEQY 110 G G ++ G+ + + F P H + + E G + Sbjct: 63 GRGFFEIE-GKNWSATPGEVFFTSPRQSHQFLNSGRDTTRYAEVTFEFVHPGSGSPIKML 121 Query: 111 WMEFTP--TSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164 ++F ++ ++P + ++ + ++ + + + A L + Sbjct: 122 GLDFAGLLSAWTNLPCEPVLSRRLPKALARVLAGKIEALVNRGRASPQPDDLELGALLAE 181 Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 I+ ++ P +I+++ + ++ + +A S + L R F Sbjct: 182 ILTVVFRNVFRKEAAAP--DKIDQVRDIIRTRYREELHLTTLAKDAGLSPSHLSRRFKAR 239 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 G++P Y L+ RL A LL+ +G S+ E+A + F D F+FS+ F+ + G AP + K Sbjct: 240 FGRSPISYQLELRLQSACELLRTRGESLAEIAAAVGFEDVFYFSRLFRRRLGEAPGSFRK 299 Query: 285 NTDQH 289 + Sbjct: 300 ASQSK 304 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 86/258 (33%), Gaps = 19/258 (7%) Query: 47 VIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV 106 + + + Y G KI + N + IIFLKP +IH Sbjct: 10 RSYEFHMAESHWHTHYEFYYLYSGHCKIFI-NHTLYYVEPGDIIFLKPGEIHRTTYHSSP 68 Query: 107 WEQYW-MEFTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155 + + F + + + + S + + E+ I E ++ Sbjct: 69 VNERVTISFDGEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEYEETGQD 128 Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQR-------RQIEKLIATLHASLQQRWSVADMAA 208 + Y+ + + + + IE ++ Q ++ ++A Sbjct: 129 GFSPLMKKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLEEVAE 188 Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268 S A+ R F TG KEY + R+ A LL SV E+AD F D +F Sbjct: 189 LSHMSPAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFG 248 Query: 269 KAFKHKFGYAPSAVLKNT 286 AF+ G +P A K Sbjct: 249 DAFRKAKGVSPRAFRKMQ 266 >UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDF7_9BACT Length = 274 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 9/272 (3%) Query: 25 NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84 +++ +G +LIS TY + D + + + + + +G G I + + T+ Sbjct: 2 DILGAGSALISKGDTYPPSIHPSDHYFDWMRGRVLDEFQLLLITKGSGTIETEATDSFTI 61 Query: 85 HGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP----VGQQSVIY---NGEIY 136 + L P H Y W ++W+ F T ++ + + + + E Sbjct: 62 TAPIVFLLYPGVWHRYRPSQDTGWHEHWIAFRGTFADELLRSGLISPEKPFHKTGHSETL 121 Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-MYADGKKDPQRRQIEKLIATLHA 195 ++ + + + + ++A A L +I+ I L + + P R+ I + + Sbjct: 122 LAQVQLIQDEVRAEAHGYRSIAAAALMQILALAITLPQRREEENQPMRKVIRRACFLMRE 181 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 + ++AA + + RR+F ++TG +P Y+ RL LL+ NS+ E+ Sbjct: 182 RSDRPLMPEELAAELNIGYTYFRRMFRKFTGISPNRYHAQLRLRRVKRLLRDTSNSIVEI 241 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 AD L F +H S FK + G +P K+ Sbjct: 242 ADVLGFNSPYHLSNWFKKETGRSPQHWRKDPQ 273 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 84/250 (33%), Gaps = 20/250 (8%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQ-YWME 113 + Y G + + ++ + +H G + + Sbjct: 26 GAHVHPFNEIFYLSSGECTSFI-DHNIYKFGKGDLVIVPSGCLHRTTYNGKGMHERIVIS 84 Query: 114 F-----------TPTSMMDIPVGQ---QSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159 F T +M+ + + L ++ SP+ + Sbjct: 85 FRNEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALLDKLIFENDSPDELSPAFIK 144 Query: 160 AFLTKIIYQWICLMYAD----GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 L +++ I + + D R I+++ ++ S+ +A S + Sbjct: 145 VGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNLSRS 204 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 +L + F TG KEY ++ R+ A +LL + S+ ++A F DS +F AF+ Sbjct: 205 YLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFRKAK 264 Query: 276 GYAPSAVLKN 285 G +P KN Sbjct: 265 GISPHKYRKN 274 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 93/269 (34%), Gaps = 25/269 (9%) Query: 35 SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94 + ++ + H + P ++ + G + + N I+ + Sbjct: 19 AGYYHVTESHPQYAMPYHW-----HEELELIHIISGTFHVTI-NETTRNAVPGDILLVNS 72 Query: 95 MDIHSYHCEGLVWEQYWM-------------EFTPTSMMDIPVGQQSVIYNGEIYNQELT 141 +H V+E D+ + + + + L Sbjct: 73 GGLHGGTPYDCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAGDDTAIHSLLE 132 Query: 142 EVAELITSPEAIKNNLAVAFLTK---IIYQWICLMYADGKKDPQRRQI---EKLIATLHA 195 + L+ + + L + ++ Q +D R I + ++ + A Sbjct: 133 RLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNVLNYIEA 192 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 ++ ++ ++A T S + F TG+TP +Y R++ A LL G+S+ ++ Sbjct: 193 HYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIGHSITDI 252 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 A F D +F++AFK G +P LK Sbjct: 253 AMLCGFNDVSYFTRAFKKYKGISPGQYLK 281 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 84/243 (34%), Gaps = 9/243 (3%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQY 110 K P N Y G G+ ++ E + + N +I L P +H+ E Sbjct: 56 WKSLPHSHNFAEFFYITNGSGQFSVE-KEILDVKANDLIILNPTIVHTEISNPSKPMEYI 114 Query: 111 WMEFTPTSM---MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167 + + S + +++ +A + S + +N + L I Sbjct: 115 VLGIEGIKFQAEDQGYILLNSSAHKSDLHL-YFNSLAHEMKSEQPYRNFVCQNLLNIIFT 173 Query: 168 QWICLMYADGKK---DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 + R+ + + Q+ ++ +++ + ++ + F + Sbjct: 174 MILRNDAFKISIVSGPKLTRECNIAKKYIEENYQENITIETLSSLVHLNKYYFVHNFKKQ 233 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 G +P Y + R++ ++ LL +S+ ++ + F +FS+AFK P K Sbjct: 234 FGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYFSQAFKRMTNITPQEYKK 293 Query: 285 NTD 287 Sbjct: 294 MYK 296 >UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 Tax=Lactobacillus RepID=A8YXG2_LACH4 Length = 274 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 108/273 (39%), Gaps = 15/273 (5%) Query: 24 ENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQIT 83 N+ + I L++ H + + + ++V Y + G G + Sbjct: 6 HNLSNPHIESYILFYGQQKCHPNEYFESN----NLQKNYVLYYILSGEGTFSSNGHHTVN 61 Query: 84 LHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT------SMMDIPVGQQSVIYNGEIY 136 L + + + + WE W+ + ++P + Sbjct: 62 LSQGDLFLIPRNTTCFFKADKDNPWEYLWLGLAGSDTKKIIEASNLPNKNFLRQIKRTEF 121 Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG---KKDPQRRQIEKLIATL 193 L E+ E++ +++ NL +A LT + ++ + + +K P+ Q + I L Sbjct: 122 YSILLELYEMLNKRKSLLTNLKIASLTSQFFYYLVKEFPNHPPVRKTPKNDQYQIAINYL 181 Query: 194 HASLQQR-WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252 + ++ ++ + S ++L LF T +P++Y + R++ A L+ +++ Sbjct: 182 QKNYTDPNCNIVELCNRLGVSRSFLYSLFRENTNISPQKYLMQLRMEAAKKELQNTTSNL 241 Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 E+A + + D F FSKAFK G +P+ +N Sbjct: 242 KEIAHKVGYGDEFTFSKAFKRYSGVSPNVFRRN 274 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-E 103 Y W P Y + G G ++N +++ + +I + P H+ Sbjct: 28 YEGDWQSH---PHTHQFSELFYVISGKGVFYIEND-TVSVCADDLIIINPHIEHTEKTMS 83 Query: 104 GLVWEQYWMEFTPTSM----MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159 + + + YN ++++ + Sbjct: 84 NDPMTYIVFGVEGLAFYFNSQNAANPKGYSYYNYGSAKTHFINFSQIMIKEFNARKPGFE 143 Query: 160 AFLTKIIYQWICLMYADGK---KDPQRRQIEK----LIATLHASLQQRWSVADMAATIPC 212 A ++ + + + QI K + A+ + ++ +A Sbjct: 144 AICHGLLQVLLVYITREQHLSVISDTTLQISKECFVAKKYIDANYAKNITLDLLAEITHI 203 Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272 ++ +L F Y G +P Y ++ RL + LL S+ EVA + F +FS+ F+ Sbjct: 204 NKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQSYFSQIFR 263 Query: 273 HKFGYAPSAVLK 284 G +P K Sbjct: 264 KNTGMSPLQYRK 275 >UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I993_CLOCE Length = 276 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 108/279 (38%), Gaps = 18/279 (6%) Query: 15 PYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKI 74 I ++ E IS I + + + EHY+ + ++ + QG GK+ Sbjct: 1 MERIFSVLTERDISLPIFVTGVGY----EHYQD----HVTRKEGFPNYHLAFCEQGVGKL 52 Query: 75 LLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPV------GQQS 128 ++ N + + F P H Y+ W W+ F+ +S+ + + Sbjct: 53 IICN-REYLIEQKTAFFFYPNVPHEYYPVAEPWSLRWIIFSGSSVHTLLNAAGIGRFEVY 111 Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR--RQI 186 ++ + E ++ +++ ++ A L + L+ + + +++ Sbjct: 112 MLNSPEEVTFCCNKLHKILLEKKSTSMLEASGVLYNFLANINKLIEEVNSEGDTQLIKKL 171 Query: 187 EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLK 246 +I + + ++ ++ ++A S ++L R+F + G +P Y L R++ A L Sbjct: 172 NSIIGFIKNNFKKDITLEELATHAGISSSYLCRIFKKEYGISPFTYILRCRVNAAKEELI 231 Query: 247 Q-QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 S+ ++ F +F FK GY+P+ + Sbjct: 232 NFPDKSIKAISLDTGFNSCSYFGSVFKEYEGYSPNRFRE 270 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 86/251 (34%), Gaps = 19/251 (7%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWME 113 +P + + Y + G ++ + + + L + + P+ IH + EGL E+Y M Sbjct: 36 RPHYHSYYEIYYLLSGQCRMFI-DQDIYYLKPGDAVIIPPLQIHRALYEEGLQAERYDMY 94 Query: 114 FTPTSMMDI------------PVGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAV 159 FT + + I L+ ++ +A + Sbjct: 95 FTKEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHENGQEDAYSHVQQQ 154 Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAW 216 + L +I+ +KD I K ++ ++ ++ MAA S + Sbjct: 155 SLLFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREHLTLDAMAAMSNMSPTY 214 Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276 R F TG KEY R+ A LL+ +V +A F D +F FK G Sbjct: 215 FSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDGNYFGDVFKKLTG 274 Query: 277 YAPSAVLKNTD 287 +P Sbjct: 275 LSPREYRNGIR 285 >UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGS5_CLOCL Length = 293 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 92/283 (32%), Gaps = 22/283 (7%) Query: 25 NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL--KNGEQI 82 N + + L + + +Y W K + +Y + G +I + N + Sbjct: 4 NSLYNPKLLNKDYRPIINTYYFRQWINYKMDYHTHDRVEIMYVIDGQCEIDVATDNVNNL 63 Query: 83 TLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYN--------- 132 L I L +H G +EF+ DI + +I Sbjct: 64 KLKKGDFILLDAGTVHRLIVLGEKSCRMLNIEFSFIEDSDILTSIRLLIEKVKSIALLFE 123 Query: 133 ----------GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ 182 L + + +++ + + ++ Sbjct: 124 MRCPFLLLKDNNDIYHSLKNIVIQLGMESEENQFSIQLLFYELLLKISKVAMSNENTSTS 183 Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242 I K + + + ++ D+++ + +E +L R+F ++TG T EY R++ A Sbjct: 184 NIYINKAKHFISMNYDKDITIKDISSYVNINEDYLNRIFKKHTGHTITEYVTLFRIEKAK 243 Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 LL + ++ + +FS+ FK G +P K+ Sbjct: 244 MLLSNTDIPIIDICSYVGINSRQYFSQVFKKCTGISPYKYRKS 286 >UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C01F8 Length = 265 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 103/230 (44%), Gaps = 8/230 (3%) Query: 64 AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM-D 121 ++G G + E I+F+ ++SY +++YW F + D Sbjct: 34 LYLILEGEGSVTCNKTEYYP-EVGDIMFVPKGSLNSYATNKDKPYKKYWCHFDADILSTD 92 Query: 122 IPVGQQSVIY----NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177 I V + N +I + ++ + S I A A L +II+ + Sbjct: 93 IAVYLSFPLLVKNANKKISYKLFAKLVKYHESKNPIDAIYAKALLLRIIHFYFSECEFVK 152 Query: 178 KKD-PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDA 236 D P + + KL+ + +L+++ ++ ++A + +L LF G+TP EY + Sbjct: 153 INDVPNQTVMGKLVKYIDENLERKITLTELAKFAHLNANYLCTLFSSTFGQTPIEYITNK 212 Query: 237 RLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 +++ A LL+ +++ E+++TL F F+FS FK + GY+PS ++ Sbjct: 213 KIEKAKILLRTTTDTIEEISNTLGFSSPFYFSAVFKKRIGYSPSQFRQSR 262 >UniRef50_A4BF96 Arabinose operon regulatory protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BF96_9GAMM Length = 287 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 96/253 (37%), Gaps = 17/253 (6%) Query: 51 RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWE 108 +P ++ TV G G + ++ T+ ++ L +H Y H + W Sbjct: 36 FWIDRPNGLKGYIINMTVSGAGLVFPGTDQERTVAKGDMMILPASAVHDYGRHPDYHNWY 95 Query: 109 QYWMEFTPTSMMD--------------IPVGQQSVIYNGEIYNQELTEVAELITSPEAIK 154 W+ F P + + + +Q + + V + + Sbjct: 96 HRWIYFRPRATWHDWLDWTDKHMNVGFLSLSKQPSDVEANVIDGLFQNVEQNSKRQSILS 155 Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214 L++ L +I+ + + +P +I + +H ++ ++ ++A S+ Sbjct: 156 EELSLNLLEQILIR-CRELDHSKPMEPIDARILRACQFIHDNIASELTIDELAQVACMSQ 214 Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274 + LF + + +++ D R+ LA LL ++ +VA L + D+ +FS+ FK Sbjct: 215 SRFSHLFKQQKNVSVRQWIEDQRIALARQLLITTDLAINQVAQYLGYQDALYFSRVFKKN 274 Query: 275 FGYAPSAVLKNTD 287 G +P ++ Sbjct: 275 LGESPREFRQSQR 287 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 89/246 (36%), Gaps = 13/246 (5%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFT 115 Y + G G+ +++ ++ + N + + P H+ E + Sbjct: 37 HTHPFTELFYVIDGKGEFIIQ-HQRFPVKANDFVIINPQVEHTEVSSPDSPLEYIVVGIQ 95 Query: 116 PTSMMDI--------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167 S ++ P ++ + + L + + T+ + + L ++ Sbjct: 96 GLSFSNLTPVDQGGHPFSFFNLRDEQKDILRYLNAMVQEATNQALSYDLVCHNLLEILLI 155 Query: 168 QWICLMYAD---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 + + + D G + I + L ++ + +A+ S ++ F + Sbjct: 156 KILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRESIQLEALASMTHLSRFYISHSFKKE 215 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 G +P EY + R+ + LL+ S+ +VAD + F +FSK F+ G +P+ + Sbjct: 216 VGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFTTPTYFSKQFRKITGISPTDYRE 275 Query: 285 NTDQHP 290 + Sbjct: 276 KYQKES 281 >UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPF1_9FIRM Length = 260 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 84/252 (33%), Gaps = 11/252 (4%) Query: 43 EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102 Y + P Y + GCG +++ E + +I + P H+ Sbjct: 8 SSYSKYEQDWESYPHTHYFSELFYVLNGCGSFIVEE-ESFPIRKQNLIIINPSIRHTEVS 66 Query: 103 E-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQ----ELTEVAELITSPEAIKNNL 157 + E + + + I ++ + E +++ + + + + Sbjct: 67 DKNSPLEYIVLGVEGLNFL-IYNDKEYLNIQCEDFSENLDFYFHTILREMDEQKESYETI 125 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEK----LIATLHASLQQRWSVADMAATIPCS 213 L +I Q + + P ++I + + ++ ++ ++ +A + Sbjct: 126 CQNLLEALIIQLSRHTGSPVEMLPSSKKITRECSYAKRFIDSNFRENITLDTLAELTHLN 185 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 + + F G P Y R+ + LL + +A F S +FS+ F+ Sbjct: 186 KYYFAHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFSSSSYFSQCFRK 245 Query: 274 KFGYAPSAVLKN 285 G P+A K Sbjct: 246 ICGMTPTAYRKQ 257 >UniRef50_B0N996 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N996_EUBSP Length = 258 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 87/245 (35%), Gaps = 7/245 (2%) Query: 46 RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI--HSYHCE 103 + + + +Y +G G L + L I+ +P + +SY+ E Sbjct: 4 FKTKDYTQNRAAGRVDYQLIYIHKGAGHYYLH-KKWENLSAGNILLFRPHEPQTYSYYFE 62 Query: 104 GLVWEQYWMEFTPTSMMDIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160 E YW+ FT +I I + E+ + + + ++ Sbjct: 63 EHP-EIYWIHFTGNECKEIIQKYNLHNCYIGEHSLLKTLFQEIIIELQIKKPYFEEMVLS 121 Query: 161 FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 +I+ I +L+ L+ W++ MA S + L Sbjct: 122 NFLQILATIARSHQQILSPLENDFSINRLVIQLNQKYMDDWNIESMAEYCKLSTGYFSHL 181 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 F + G P +Y + R++ A L+ ++ ++A + F DS +FS+ FK G P Sbjct: 182 FKKRMGSAPMKYLTELRIEKAKELIATNSMNLSDIAQMVGFTDSLYFSRVFKKTTGIPPK 241 Query: 281 AVLKN 285 ++ Sbjct: 242 EFQQS 246 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 100/268 (37%), Gaps = 25/268 (9%) Query: 40 YADEHYRVIWPRD--KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97 + Y P D S ++ +G G+I Q I + P + Sbjct: 102 FPFNIYPCTIPGDFPSVALHWHKSMEIIFVKKGTGRIQTGRNMQ-EARSGDIFVMPPGTL 160 Query: 98 HS-YHCEGLVWEQYWMEFTPTSM---------MDIPVGQ------QSVIYNG-----EIY 136 H+ Y G E + F + + V Q +++ + Sbjct: 161 HAIYAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASGQLLQPAVFSPVDAGYKQI 220 Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD-PQRRQIEKLIATLHA 195 + L EL ++ E A L +++ + + ++D P ++++++ + Sbjct: 221 SACLRRAEELCSARERGYELGVKAALLELLLYLLRMCPEAPERDTPDMERLKRVLQRIEQ 280 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 + +V DMAA CS + R F R TG +P Y + RL A L++ + + + Sbjct: 281 DYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLAAAAENLRETDDKILVI 340 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 A+ F + +F++ FK ++G P A Sbjct: 341 AENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_B0NXL6 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NXL6_9CLOT Length = 282 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 109/291 (37%), Gaps = 24/291 (8%) Query: 3 GKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW 62 G L S +P E + +++ H Y YR + Sbjct: 7 GVLPKSQYFFFSPS-------EQFLKYNYGVVNCGHFYCHFGYRREREGNAYP------- 52 Query: 63 VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDI 122 + +Y +G + + + I + H+Y+ + E Y+ F + +I Sbjct: 53 LFIYVAEGELHLE-HDSQHEVAKKGEIFLIDCSKPHAYYVDKE-CEFYYFHFAGRAAYEI 110 Query: 123 ---PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG-- 177 + I + + + +L SP + ++ L+ + YQ +C++ A Sbjct: 111 TKDLILDNKGCLFHIINSDRIRKQMDLTISPLFYEQPISDVSLSCMAYQCLCMLQASNDV 170 Query: 178 ---KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234 ++ + + + + L + ++ +++ S + LF TG +P EY Sbjct: 171 FTTEESDENSMLSSTMTYIREHLGHKLTLEELSRQASLSPYYFAHLFKEETGISPIEYVA 230 Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 +++ A ++LK NS+ E+AD L + F AFK + G +P+ + Sbjct: 231 MTKINYAKNILKTTENSITEIADLLGYSSDASFINAFKKRAGLSPARFRRK 281 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 88/249 (35%), Gaps = 10/249 (4%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE- 103 Y WP G G+ ++N L I + P H+ + Sbjct: 28 YENDWPSFM---HTHPFTELFLVTGGVGEFYVENN-IYPLKKGDFILVNPNASHTEKSDE 83 Query: 104 GLVWEQYWMEFT--PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161 E + ++ D + I + + + +A +++ Sbjct: 84 KNPLEYIAVAVDNFSLNLTDTNHLMFNCISKNPNIIKYMDSMLAEQEGNKAYSDHICQNI 143 Query: 162 LTKIIYQWICLMYADGKKDP---QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218 L I+ + + + +D +P ++ KL + ++ + ++ D+A ++ +L Sbjct: 144 LEIILIEILRITKSDIDTEPTVNASKECFKLKKYMDSNYASKITIDDLAKLSNLNKYYLI 203 Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278 F +Y G +P Y R+ A LL+ S+ +++ + F +F++ F G + Sbjct: 204 HSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQSTGFSSQSYFTQCFIKSCGLS 263 Query: 279 PSAVLKNTD 287 P A T Sbjct: 264 PKAYRNRTK 272 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 96/262 (36%), Gaps = 25/262 (9%) Query: 48 IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLV 106 + +Y G G + L N E + + +I + +H + + Sbjct: 21 CEIFHSLYNHWHDEMELIYIESGSGLVRL-NKEILRVKAGDLIIVNRGVLHGIKTDLKNI 79 Query: 107 WEQYWMEFT----------------PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSP 150 + F + +MD +I + + + + I S Sbjct: 80 LYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHIISRSDDNYGNICLLFDRIHSC 139 Query: 151 EAIKNNLAVAFLTKIIYQWICLM-------YADGKKDPQRRQIEKLIATLHASLQQRWSV 203 K L + + + M AD ++ I+K++ ++ + Q + Sbjct: 140 HKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKDENKSLASIKKILDYINLNYSQPLTA 199 Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263 A++ A SE + +LF +YTGKT Y D R++ A +L +SV E+A + F + Sbjct: 200 AELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSDSSVTEIALEVGFNN 259 Query: 264 SFHFSKAFKHKFGYAPSAVLKN 285 + +F K F+ G +P +N Sbjct: 260 TSYFIKKFQQATGMSPHKFRRN 281 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 93/242 (38%), Gaps = 9/242 (3%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFT 115 + Y V G GK L +N E + ++ + P H+ +G E Y + Sbjct: 37 HTHHFTELFYVVSGEGKFLFRN-ETHHIKTGDLVIIPPYLEHTEQSVKGKSLEYYVIGID 95 Query: 116 PTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI- 170 S + + + + ++ + + + + L +I + I Sbjct: 96 KISFLAENGQTGIQAFCNFRDQSSVSDIFAQMLYEMRNDDYGSEIICQNLLEILILRIIR 155 Query: 171 --CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 L+ + ++ ++ L + +R ++ + + ++ ++ F +Y G + Sbjct: 156 SQRLIPISINSERMTKECAQIKEYLDTNYTERITLDTLTSLTHMNKYYMAHSFAKYAGLS 215 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 P +Y RL +A +LL+ +SV ++A + F +F+++F+ +G P + + Sbjct: 216 PIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQSYFTQSFRKYYGMTPLQYRQQNAE 275 Query: 289 HP 290 Sbjct: 276 TS 277 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 22/253 (8%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS--YHCEGL----VWEQY 110 ++W Y V G G + ++ + P IH Y+ + Sbjct: 34 HQHDAWELYYVVHGQGN-RMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEEGHVRYL 92 Query: 111 WMEFTPTSMMDIPV-------------GQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 + F+ + + + G ++ + + I + ++ Sbjct: 93 MVAFSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESSRIIRRILSEINEMDELERLS 152 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 A+ L +I+ A +R R+++++ A + ++ D+A + + + Sbjct: 153 AMFRLLPVIFTSSDYTLAGKPMRIERDVRRMQQICAYVMKHYVHSIALDDIAEEVGMNRS 212 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 F R G T ++ RL+ A LLK V E+ + F D HF + F + Sbjct: 213 AFCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGFNDLPHFVRVFTNTM 272 Query: 276 GYAPSAVLKNTDQ 288 G +P+ K Sbjct: 273 GMSPTKYRKQYKN 285 >UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSQ7_PAESJ Length = 285 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 111/273 (40%), Gaps = 12/273 (4%) Query: 17 NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76 NIP ++ E +W AD Y+V P P + +W G G I L Sbjct: 18 NIPYVLEELPPQPPCRFQLIWKVQADIAYQVANPTGFSSPGLFATWE------GKGVITL 71 Query: 77 KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM---MDIPVGQQSVIYNG 133 EQ L I + P +Y C W+ Y++EF M +++PVG Sbjct: 72 G-SEQHELVAGTYIIVPPDTPTAYRCLNGNWKFYFLEFDSLDMALGLNLPVGIPVSTAKM 130 Query: 134 EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATL 193 + + + A + + +++ + +A+ + + +++ ++ + Sbjct: 131 AEAARMNERLINNLIMKPAGYAYDSHLAMQELLLLFARERHAN--RSGRHPELDDILYRM 188 Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253 H ++ Q + + S F TG +P +Y + +L A + L+ SV Sbjct: 189 HQTIGQAFPIEKWVQQSGLSRNAFFTRFRERTGMSPNQYMQELKLAAAKTSLETTQASVK 248 Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 E+A L F+D FHFSK FK ++G +P A ++ Sbjct: 249 EIAAALQFYDEFHFSKLFKKRYGMSPRAYRRDA 281 >UniRef50_UPI0001788DE5 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788DE5 Length = 285 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 88/262 (33%), Gaps = 15/262 (5%) Query: 36 LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPM 95 + P P I+ ++ + + G + + + +TL L P Sbjct: 23 GGIWILRAGRSLARPNYSVGPKISENYALHFVLNGKISLAFGD-KVVTLSAGDAFCLFPH 81 Query: 96 DIHSYH-CEGLV---WEQYWMEFTPTSMM----DIPVGQQSVIYNGEI---YNQELTEVA 144 +SY G W+ + I + + + + L ++ Sbjct: 82 TRYSYWEPNGDPEPTLRMQWIVLDGEAAESALTRIGLHPSTPFLHNVMKGGLQAVLDQIY 141 Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVA 204 + L ++ A K++ + +E+ + + + + +V Sbjct: 142 GCVDDDTIGHEFGRQKRLYQLFELLAA---APAKRETKPNWLEQSVHYMDSHYMEGITVT 198 Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264 D+ L F+R G +P Y + R++ A LL + SV EVA +L + + Sbjct: 199 DVVHQAGVHRTHLYCEFIRVHGISPSHYLMKLRMERAAVLLTETDVSVTEVAFSLGYSNL 258 Query: 265 FHFSKAFKHKFGYAPSAVLKNT 286 FS+AF + +P++ Sbjct: 259 HTFSRAFAKYYRISPTSYRLQH 280 >UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K3_PAESJ Length = 296 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 98/262 (37%), Gaps = 14/262 (5%) Query: 36 LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIF--LK 93 D+HYR PL+ + YT G G + E + + + Sbjct: 31 GQDVIRDQHYRWDGLTRNDGPLL----LFQYTFDGEGIYE-RGTETLRIQAGQAFMTEIP 85 Query: 94 PMDIHSYHCEGLVWEQYWMEFTPTSMMDIP------VGQQSVIYNGEIYNQELTEVAELI 147 + + +G W ++ P+ ++ +G + G + L + E Sbjct: 86 GDHRYYFPPDGSHWSFIFVLIRPSLILPNWEEVKKQLGDTPFLPAGSRPIRLLQSMYEEA 145 Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADGK-KDPQRRQIEKLIATLHASLQQRWSVADM 206 + + A +++ + I + A + ++++ ++ + A + S+ + Sbjct: 146 HAGRVKEPYTASSYVYQFISELCRFALAPQEDAKEWPLKVKEAVSYIDAHYENMISLDQL 205 Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266 A + S+ L RLF R G +P +Y R+ A+ LLK+ SV +A+ + + + Sbjct: 206 ADQLSLSKYHLLRLFTRTVGMSPNDYLNQVRIKEAIRLLKESDWSVERIAEQVGYSGGSY 265 Query: 267 FSKAFKHKFGYAPSAVLKNTDQ 288 F K F+ G P + Q Sbjct: 266 FIKWFRKITGETPGSFRHGEGQ 287 >UniRef50_C6JAN7 Helix-turn-helix domain-containing protein n=2 Tax=Ruminococcaceae RepID=C6JAN7_9FIRM Length = 291 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 102/273 (37%), Gaps = 13/273 (4%) Query: 27 ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86 S + SL + +V P +S++ G G+++ + G +L Sbjct: 21 TPSNFARTSLLYLQEIGSLQVHKP-HSTGRSNLSSYLFFTVTDGEGELICE-GRTYSLRT 78 Query: 87 NCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM----MDIPVGQQSVIYNG---EIYNQE 139 +F+ +++ +W W+ F +M +++ + + Sbjct: 79 GDCVFIDCRKQYAHSSSEKLWSLSWIHFYGPNMTAIYDKYLERGGRAVFHPVSVSGFLEI 138 Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP----QRRQIEKLIATLHA 195 + EL S + I++ + L ++ + + G+K +++ + + L Sbjct: 139 CHRIYELADSDDYIRDMKINSELNYLLTLLMNESWHPGEKHRDADLKKQNVLPVKQYLDE 198 Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255 Q++ S+ +A S+ +L R+F G + Y ++ R+ A +L+ + + Sbjct: 199 HYQEKISLDFLAEHFFISKYYLTRVFREQFGVSISSYLMNRRVTKAKYMLRFSNEKIKTI 258 Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 + +FS+ F+ G +P + ++ Sbjct: 259 GYKCGLGEPHYFSRVFRQMEGMSPLEYREKWEK 291 >UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=Yersinia RepID=A4TH83_YERPP Length = 292 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 10/271 (3%) Query: 32 SLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIF 91 + + + + ++ + G G I L+N + + + Sbjct: 21 FSTLVNYRILRAGHIRAADNFHVRRQSVAGHELIFCLNGSGFIRLENN-LHEVKKGNLAW 79 Query: 92 LKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPV------GQQSVIYNGEIYNQELTEVA 144 L H + WE W+ + +I + E + Sbjct: 80 LPVRWPHEHFPNKQEPWEILWLRIDGAKLNNIMQILDVAQQPVFEFTSPETITDIYHRLF 139 Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKLIATLHASLQQRWS 202 +L+ S + + +++IY + D K P R + +LI +H+ W Sbjct: 140 DLMQSHTLVADAHCDVLCSQLIYTLLENRSFDATKSPVISHRGLGRLIYQIHSHYNDDWD 199 Query: 203 VADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFF 262 + S++ L RLF ++P + + RL A LL + ++ +A + + Sbjct: 200 IDKFMQYCQVSKSQLFRLFQETFNQSPLRWLKNYRLSQARRLLVETEETISRIAGLVGYN 259 Query: 263 DSFHFSKAFKHKFGYAPSAVLKNTDQHPTDA 293 D HFS+ F G +PS + Q D Sbjct: 260 DPLHFSRDFHRSVGLSPSDFRRQERQLDNDR 290 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 90/269 (33%), Gaps = 24/269 (8%) Query: 40 YADEHYRVIWPRDKKK--PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97 + Y P D ++ S V+ QG G + + + I P + Sbjct: 18 FPFNLYPCTIPGDFQQVALHWHESMELVFVKQGMGLVQVG-VVTYPAYRGDIFIFAPGTL 76 Query: 98 HSY-HCEGLVWEQYWMEFTPTSM---MDIPVGQQSVIYNGEIYN---------------- 137 H+ EG E + F P + D+ + + + Sbjct: 77 HALRQAEGQRMEYENIIFEPELLGGAEDLCAEKYLLPLQSGRLSLPVRLTPNDLCYLQAA 136 Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIEKLIATLHAS 196 L E+ + + L L + + I + ++++ ++ L A Sbjct: 137 ACLRELEDANRAKRPGYELLVKGALLRFLALLIAQGRQCLSTETADTQRLKTVLQWLSAH 196 Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256 + VAD A S + R F + TG++ + + RL+ A L+ +V +A Sbjct: 197 YAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAFLNEYRLNTAAEALRTTDETVLTIA 256 Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 F + +F++AFK FG P K Sbjct: 257 SRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 92/250 (36%), Gaps = 12/250 (4%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQY 110 + K N + Y G + + + + +I P +H Y + +++ Sbjct: 38 NMMKSHYHNYYEIYYLEDGE-RYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKRI 96 Query: 111 WMEFTPTS---------MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161 + F + + + + + ++ L E+ +P + Sbjct: 97 VLYFESSEVASKELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYRRTL 156 Query: 162 LTKIIYQWICL-MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220 L ++ + + ++ + + ++++ +H+ Q+ ++ +A S+ +L R Sbjct: 157 LNMFLFTMLMHTRRREPEQMEETGRTTQIVSYIHSHYQEDITLEQLAQKFYVSQFYLCRE 216 Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280 F RYT T +Y R+ A L + ++ E++ F + HF++ FK G PS Sbjct: 217 FKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVTGTTPS 276 Query: 281 AVLKNTDQHP 290 K+ Sbjct: 277 GYRKHHQNMQ 286 >UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D1W6_PAESJ Length = 264 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 107/259 (41%), Gaps = 13/259 (5%) Query: 41 ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100 H+ +P W+ VYT++G G GE+I ++ L+ H+Y Sbjct: 10 VTGHFLENESYCMVRPAGREDWLLVYTLEGEGFFRTPAGEKI-CKAGELVLLRKRVPHTY 68 Query: 101 HC-EGLVWEQYWMEFTPTSMMDIPVGQQ---SVIYNGEIYNQELTEVAELITSPEAIK-- 154 +G W W+ F + + ++ + + E+ + + L+ A Sbjct: 69 GTVKGDTWNFLWVHFNRLPELSLLPDEEVLLCPLPSSELQRRVIRIFRSLLHDSRAQGGF 128 Query: 155 -NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213 L L+ +I + D ++ +++ L A +Q+ S+ ++AA + S Sbjct: 129 WEELCDNQLSALILLMAGQL-----ADKLDYRVSQVMRILSAQMQEPLSINELAARVGLS 183 Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273 + L LF TG++ + + RL+ A+ L+ Q G + GE + + F HF+ F+ Sbjct: 184 ASRLSHLFKSETGRSIVDTLNNMRLEQAVLLMLQAGRTAGEASFDVGFQSYNHFAALFRR 243 Query: 274 KFGYAPSAVLKNTDQHPTD 292 ++G P+ + T+ T Sbjct: 244 RYGCGPAEYKRKTESTSTP 262 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 87/242 (35%), Gaps = 11/242 (4%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFT 115 + ++ V G G N EQ L ++ + P H+ E Y + Sbjct: 37 HTHHFTELLFVVSGEGSFSF-NQEQSPLRRGDLVIIPPYTEHTERSSQNHPLEYYVLGID 95 Query: 116 PTSMM--------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167 S + + + E++ Q L E+ + I +L + KI Sbjct: 96 GISFLSQKDRECAQVFCNFEHDPSIHELFRQMLYEIRTAQYGSQTICQHLLEILILKI-I 154 Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 + L+ ++ ++ L ++ + ++ + ++ ++ F +Y G Sbjct: 155 RSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHITLDTLTGLTHMNKYYMVHSFTKYAGL 214 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +P +Y RL A LLK S+ ++A + F +F++ F+ F P + Sbjct: 215 SPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSYFTQIFRKNFNMTPVKYRQEHA 274 Query: 288 QH 289 ++ Sbjct: 275 KN 276 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 89/253 (35%), Gaps = 13/253 (5%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-E 103 Y W + + Y +GCG + E + N + + P +H+ + Sbjct: 29 YEGDWH---SQLHSHHFTELFYVTKGCGGFKIGADE-FNVQENDFVIINPNTMHTEVSRD 84 Query: 104 GLVWEQYWMEFTPTSMM-DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFL 162 E + S + + N Y E+ L+ KN L Sbjct: 85 RNPLEYIVIAIDGISFEIPEDSLKDYISCNYANYKNEILFYLNLMVKESQAKNELYDDMC 144 Query: 163 TKI-------IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 ++ I + + + + R++I + + + + ++ +A ++ Sbjct: 145 QQLMQVLLINILRLNRINVSLTQGKTIRKEIFMIKNYIDRNYHKEITLDTLAEKTHMNKF 204 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 +L F G +P Y L R+ + LL+ S+ +++ L F +F++AFK Sbjct: 205 YLAHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGFSSLSYFAQAFKKST 264 Query: 276 GYAPSAVLKNTDQ 288 ++P KN + Sbjct: 265 NFSPLQYRKNHQK 277 >UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FM47_DESAA Length = 277 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 96/246 (39%), Gaps = 14/246 (5%) Query: 54 KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWME 113 + + + ++G +++ + G + + + + P + H+ E + + Sbjct: 32 FSRHVHDGFSIGIVLEGK-RVIDQKGASVVIGPKDVFLINPGEPHACKSEDGKHTYFTIC 90 Query: 114 FTPTSMMDIPVG-----QQSVIYNG-----EIYNQELTEVAELITSPEAI--KNNLAVAF 161 P ++ Q++ ++ E N + E L+ + K ++ Sbjct: 91 VEPEALKSFASQISEKAQETPYFSCLAAKDEELNSLIREFMTLVQKSGSTMEKEASLISI 150 Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 L+ I ++ + P + + + + + ++ ++A S + +RLF Sbjct: 151 LSTAILRYGDNPPEIRRISPHVQAVNRAREYIKTHYAENLTLKELAGVACLSPFYFQRLF 210 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 L G +P ++ + R+ A +L Q S+ + A + F D HF++AFK G +P Sbjct: 211 LENVGISPHDFLIQYRIKKAREMLDQGS-SLADAALDVGFTDQSHFTRAFKRVTGISPGR 269 Query: 282 VLKNTD 287 ++N Sbjct: 270 YIRNLQ 275 >UniRef50_C6D456 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D456_PAESJ Length = 283 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 83/257 (32%), Gaps = 15/257 (5%) Query: 40 YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99 + P K P + + +G ++ + G Q+ L + L P + Sbjct: 27 PVRAGRCLAKPHYKVGPKRIECYSIHFVREGRLRLEYE-GRQVELARGDLFVLFPDRTYY 85 Query: 100 YH--CEGLVWEQYWMEFTPTSMM----------DIPVGQQSVIYNGEIYNQELTEVAELI 147 Y E W+ + P + +V E E E + Sbjct: 86 YDMLPAERPLEMRWLAIDGDRVEALLQLAGLTEQEPFRRGTVSSRIEAAADRAIEALERV 145 Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMA 207 L ++ + + G+ I + + + +V +A Sbjct: 146 QRWRPAVALELQGHLYGLLSALM--LEEAGQGPELASWIHECAEYMELHATEGITVQQVA 203 Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267 ++ ++F G P +Y R++ A LL SV E+ +L + + + F Sbjct: 204 EFAGVHRSYFTQVFTEEMGMPPMKYMQKVRMEKARRLLIDTHASVTEIGLSLGYPNLYTF 263 Query: 268 SKAFKHKFGYAPSAVLK 284 ++AFK F +P A+ K Sbjct: 264 TRAFKMYFKESPLALRK 280 >UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CXJ2_PAESJ Length = 289 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 16/258 (6%) Query: 50 PRDKKKPLIANSW---VAVYTVQGCGKILLKNGEQITLHGNCIIFL--KPMDIHSYHCEG 104 P + + YT+ G G I + + I L + + Y E Sbjct: 30 PDYSFTGDERPDFGHVIFQYTLNGLGYIEYE-QQCIPLPRGTGFLVKVPSKHRYFYKSED 88 Query: 105 LVWEQYWMEFTPTSM---MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161 WE W+ + D+ + Q+ I + + + +L+ S A + Sbjct: 89 EPWEVLWLNLSGDEASRIWDLVIAQEGPIIRRDPNSPIIHAFRKLLRSI-AEEKITDKYQ 147 Query: 162 LTKIIYQWICLMYADGKKDPQR------RQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 L+ +Y+W+ + ++ + I++ + Q ++ +A ++ Sbjct: 148 LSAKVYEWMIALVQTSREVSREISTSSSSLIQRAKDFMKQHYAQPLTLDQLAEHCGVNKY 207 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 L RLF + +P Y D R++ A++LL+ V + + F +S +F K F+ Sbjct: 208 HLCRLFQKSDQTSPLAYLRDRRMEAAVALLRTTELPVQTIGEMCGFENSSYFGKVFREYM 267 Query: 276 GYAPSAVLKNTDQHPTDA 293 P + P DA Sbjct: 268 SMTPKEYRMKKIEFPYDA 285 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 109/298 (36%), Gaps = 35/298 (11%) Query: 10 VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69 + E N P ++ S+ + H+ + + +Y Sbjct: 1 MYFELKENKPHGTKDDPFSTYHIENAGQSFQIPVHW-------------HDEFEIIYVKS 47 Query: 70 GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY-------WMEFTPTSMMD- 121 G + + +GE + P ++H + + + ++ F ++D Sbjct: 48 GFLTVNI-SGENYIGKPGDAFVVSPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDD 106 Query: 122 ---IPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI-----IYQWICLM 173 P+ ++ + + + +LI EA K+ + T+I + Q+I M Sbjct: 107 RLLEPLDSGRLMISPSVKDTIKELCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEM 166 Query: 174 YADG---KKDPQRRQI--EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 + G + + R I +++++ + + + S+ + SE ++ R F + T Sbjct: 167 WEKGFIVENNTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHIT 226 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 +Y RL+ A LL+ SV E A + + +F ++FK +G +P K Sbjct: 227 LSQYVAYLRLEYAKQLLQDTDISVTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKKQ 284 >UniRef50_C6IZ62 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZ62_9BACL Length = 293 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 89/261 (34%), Gaps = 19/261 (7%) Query: 35 SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94 + + + D Y PL+ + YT+ G G L + + Sbjct: 26 AGYDSITDPSYYWDGLERTDGPLL----LFQYTLSGEGVFELGE-RSHRVTAGQAFLAEI 80 Query: 95 MDIHSYHCEGL---VWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAELI 147 H Y+ WE ++ F P +V Y E +A +I Sbjct: 81 PSSHRYYYPQEASAPWEFLFLLFRPNVVLPLWRKFLSEAGAVPYLPEDSAPV--RLARMI 138 Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWS 202 + + +YQ++ + + ++ +++ + ++ Q S Sbjct: 139 ITDAGAGRITDPYIASSCVYQFVTELARMQVTSQKNKENWPESVKRAAELMESNYAQMIS 198 Query: 203 VADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFF 262 + ++ + S+ L R F TG TP Y R + A+ LL+ S+ +A+ + + Sbjct: 199 IDQLSEHVGLSKYHLIRRFSDSTGLTPGAYLTRVRTEKAMDLLRGTSLSIETIAERVGYS 258 Query: 263 DSFHFSKAFKHKFGYAPSAVL 283 +F KAF+ G P Sbjct: 259 SGSYFIKAFRRLTGLTPGEFR 279 >UniRef50_UPI0001C35596 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35596 Length = 279 Score = 179 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 86/241 (35%), Gaps = 6/241 (2%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104 +R P K +P + Y + G + + G + +I + S Sbjct: 17 HRKCTPNWKIEPHVIPFIDITYVIDGKAEYNIG-GRTYIVKKGDLICIPQNTFRSAVNIP 75 Query: 105 LVWEQYWME--FTPTSMMDIPVGQQSVIYNGEIYNQELT---EVAELITSPEAIKNNLAV 159 + + F +I + I + ++ E+ E + Sbjct: 76 EDLMECYSTNIFLRNQFGQEAYLPVPIISHIGIIPRLISRFHEIHEEWVQKDFGYMLKIR 135 Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219 L I+YQ L+ + + +I+ I + + ++ MA + Sbjct: 136 GILCLILYQISNLILNENHLSQEDPRIKSSIRYMSLHYAEPLTIDRMAEQFHLHPVYYGS 195 Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279 LF G T K+Y + RL+ A ++LK SV EVA F D F+FSK FK K G P Sbjct: 196 LFREAMGMTFKQYLISLRLNYAENMLKSGEYSVSEVALQCGFSDIFYFSKLFKEKKGIPP 255 Query: 280 S 280 S Sbjct: 256 S 256 >UniRef50_C4FY02 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY02_9FIRM Length = 282 Score = 179 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 98/257 (38%), Gaps = 16/257 (6%) Query: 40 YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99 + + + P + + ++ + G G + + N L N L+ Sbjct: 17 FDECGIQQFEPYQVYQYTVYQPYIIHWIASGKGSLEVDN-HCYPLTANQGFILRRGQQVK 75 Query: 100 YHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE------LTEVAELITSPEA 152 Y+ +G W YW+ F+ + + Q + + E + ++ S Sbjct: 76 YYADGKEPWRNYWIGFSGQRLEEFLQFTQLADAHCIQFQDEGQCQAIIQDICHFNLSQTQ 135 Query: 153 IKNNLAVA------FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADM 206 N FL + + L + + ++ +A+ + +V + Sbjct: 136 DANTFYWQMMKIFDFLYHAHLELVSLSAPRQQSNSSPAEVAAAYI--YANYARPITVESI 193 Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266 A I S + L RLF ++ ++PK++ ++ RL A LL + +S+ +A ++ + D Sbjct: 194 AQYIGMSRSALFRLFRQHYRQSPKQFLMETRLRQARQLLVESQDSIKTIAASVGYSDQLV 253 Query: 267 FSKAFKHKFGYAPSAVL 283 FSK FK FG +PS Sbjct: 254 FSKIFKKTFGLSPSDYR 270 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 179 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 98/252 (38%), Gaps = 22/252 (8%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH--SYHCEGLVW---EQYW 111 + + VY G IL+ + + ++ + P +IH SY V Sbjct: 26 HSHDCYELVYLFSGECNILV-SHTIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQRTALR 84 Query: 112 MEFTPTSMMDIPVGQQSV--------IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163 T + +G+ V I + + + + + + + L++ + Sbjct: 85 FSIKDTDWLCSALGKDFVKDNLTAGIIEVPDKRKEYIENLITRMIYENQMPDELSMGMVK 144 Query: 164 KIIYQWICLMYA--------DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 + +++ + + D Q I+ + ++ + ++ + D+A S + Sbjct: 145 TLFQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATYVYNNYDKQIYLDDVAKQFSISRS 204 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 +L + F + TG KEY L+ R+ A LL + +S+ ++A F DS +F AF+ Sbjct: 205 YLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGFNDSNYFGDAFRRIK 264 Query: 276 GYAPSAVLKNTD 287 G +P+ N D Sbjct: 265 GISPNKYRHNRD 276 >UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibrionaceae RepID=A6B487_VIBPA Length = 279 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 96/244 (39%), Gaps = 15/244 (6%) Query: 55 KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWM 112 +P ++ T QG G I N + + ++ P H YH + W W+ Sbjct: 36 RPNGMKGFIINITSQGEGTIFHGN-DAFDVKTGDLLLFPPSATHFYHRKKDNASWFHRWV 94 Query: 113 EFTPTSMMD----IPVGQQSVIYNGEIYNQELTEVAELITSPE-------AIKNNLAVAF 161 F P + + + V + N ++++ L E +++LA+ Sbjct: 95 YFRPRAFWNDWLCWHEQRNGVYLTQGLDNSTISQIERLFIDIEYISKSDMPYRDDLAINL 154 Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 L +++ + + D P ++ + + + +L Q +++ D+A S + L LF Sbjct: 155 LEQLLIR-CKTIQPDVVSKPLDPRVIEAMNYMTQNLNQNFTLEDIADFTCLSASRLGHLF 213 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 G T ++ D R+ A LL SV + + + D +FS+ FK K G +P Sbjct: 214 RDEVGMTITQWRDDQRISRAKQLLVTTNYSVNHIGRIVGYTDPLYFSRVFKRKAGASPKL 273 Query: 282 VLKN 285 + Sbjct: 274 YREQ 277 >UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AXU1_ENTCA Length = 299 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 97/288 (33%), Gaps = 24/288 (8%) Query: 31 ISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCII 90 + + +Y V R P + ++ +G KI +++ + I L N + Sbjct: 2 VFPQETNYAKITAYYSVALERFSMDPHQHPACEIMFVTKGKCKIKVQD-QVIVLERNDFV 60 Query: 91 FLKPMDIHSYHCEGLVWEQYWMEF------TPTSMMDIPVGQQSVIYNGEIYNQ------ 138 F+ H+ EG +EF + + D+ + + E Y + Sbjct: 61 FINAFVEHALLVEGDSCTILNIEFLLSETPSGLCVRDVFAYIKGNVQLNEPYAKSRDVRQ 120 Query: 139 ---------ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKL 189 +L + + P A + +++ + + + + Sbjct: 121 FGQAIKSLLQLLMIDDTQEQPSAERQFTIELLFKRMLMELAFSL-RTKETKRGNCYVNAA 179 Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249 I + + V+ +AA + ++ +L +LF G T + RL A LL Sbjct: 180 INYIQQHFDEDIQVSQIAAAVGITKTYLHKLFHEQLGVTVNHFLTSERLKQAAFLLSNSQ 239 Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH-PTDASPH 296 + E+A F HF+ FK K G +P A Q +A H Sbjct: 240 LPIVEIAAQAGFNSRQHFTNTFKQKKGMSPKAYQLLYKQTIKEEAGQH 287 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 88/252 (34%), Gaps = 22/252 (8%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH-----CEGLVW-EQY 110 ++W Y V G GK + + + P +H + + + Sbjct: 34 HRHDAWELYYVVHGYGK-RMAGDTLQPFAAGDVALIPPSMLHHWEYSPDSADDDGYVRYL 92 Query: 111 WMEFTPTSMMDIPV-------------GQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157 + F+ + + + + G +Q + + + + + Sbjct: 93 MVAFSHSLVERCMAVFPELRNRLTGITFPTNALKFGTGSSQTIRRILSQMNDMDELGRLC 152 Query: 158 AVAFLTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 + L I+ +A + +R R+++++ + S+ D+AA + + + Sbjct: 153 EMFRLLPAIFTSSDHTFAGKPMNIERDVRRMQQICVYVMTHYIHTISLDDIAAEVGMNRS 212 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 F R G T +Y RL+ A LLK V E+ T+ F D HF + FK+ Sbjct: 213 AFCSYFKRCKGMTFSQYVTQYRLNTACELLKHSQKQVSEICFTVGFNDLPHFVRVFKNTL 272 Query: 276 GYAPSAVLKNTD 287 G +PS + Sbjct: 273 GMSPSKYRRRFQ 284 >UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CS68_PAESJ Length = 288 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 7/245 (2%) Query: 52 DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQY 110 ++ + W VY G G + +GE + + +P + Y + G W++Y Sbjct: 44 HFRQGAVFQYWAIVYIAGGSGTYRVDHGEAQRVTAGSLFLFQPGFHYDYGPDPGGYWDEY 103 Query: 111 WMEFTPTS----MMDIPVGQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAVAFLTK 164 + T + P+ +V++ GE + + L+ S + A L Sbjct: 104 YFTIEGTRYREWLEHWPILPNTVMHPGEDASSQNRIDRIFALMDSGTPADADRAALTLES 163 Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224 ++Y W+ + + ++ +L+ L +L + + A A + + LRR Y Sbjct: 164 LLYDWVQSCQSSPAAQGKTARLAQLLEALSGTLHEPFDAAAFAERHHWALSTLRRTVSEY 223 Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 TG EY ++ A + L +V E+A L + D F+FS+ FK G AP + Sbjct: 224 TGFALHEYVHRLKMAEAKNRLLNTEQTVKEIAAALGYGDVFYFSRLFKKITGEAPRLFRR 283 Query: 285 NTDQH 289 N Sbjct: 284 NMRSK 288 >UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10 Tax=Rhizobium/Agrobacterium group RepID=B5ZUS0_RHILW Length = 274 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 7/245 (2%) Query: 51 RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY 110 R S+ V +G G + +++L G + +L P HSY + W++ Sbjct: 29 RHAVTDRKLPSFAVVLVERGQGWLETAASGRLSLTGPALFWLFPNRAHSYSPDEDGWDER 88 Query: 111 WMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAEL-------ITSPEAIKNNLAVAFLT 163 W F + D + + + L +VA L + + A L Sbjct: 89 WALFEGSFTRDFVRLRIIAERHPVVALHRLDDVARLFGTLHADLLDDTHLGQASAALMLH 148 Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223 +I+ ++ +R + ++ TL Q +A AA S A LRR F Sbjct: 149 RIVISAARQAIGAAERRQERPDMAVIVETLRRRAMQPLDLAAFAAEHQMSPATLRRRFTL 208 Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 TG PK + L AR+D A LL + VA + D F+FS+ F + G +P Sbjct: 209 ETGLPPKAFQLRARMDHAKQLLATTDEKIEAVAAMIGLEDPFYFSRVFHEREGCSPREFR 268 Query: 284 KNTDQ 288 + Sbjct: 269 ARYRR 273 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 63/174 (36%), Gaps = 7/174 (4%) Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175 + V ++ I + L A ++ E + L I Sbjct: 347 GRKAEETFVWLGRLLSELGIRYERLASFASCRSAAELKRAALDE-------LDRIAADLE 399 Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235 ++ ++ K + + ++ ++A S + +LF + G T +Y + Sbjct: 400 VWRQQQAYGKLGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTN 459 Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 R++ A L + S+ E+ ++ + D +FS+ FK + G +PS K Sbjct: 460 VRIERAKEALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQAR 513 >UniRef50_UPI0001788D3A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D3A Length = 291 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 91/269 (33%), Gaps = 14/269 (5%) Query: 36 LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPM 95 LW + H K P + + G + +G ++L + L P Sbjct: 27 LWIFKSGSHPFFTE---KVGPRSVEFYSIHFVASGKVRFGW-DGSSVSLSEGDLFCLFPG 82 Query: 96 DIHSY--HCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNG-------EIYNQELTEVAEL 146 +++Y C+ W F M I + + ++ L Sbjct: 83 SVYTYVKDCDEPSTMITWTAFMGELMPSILNHVDLCPERPYRRNAFRDDALAVIKDIQRL 142 Query: 147 ITSPEAIKNNLAVAFLTKIIYQWICLMYAD-GKKDPQRRQIEKLIATLHASLQQRWSVAD 205 + P+ + ++ ++I+ +E + + + SV + Sbjct: 143 LRQPQQDHSLQLMSLGFQLIHSIDPNRDQHLPAASAASDWLESVPGYMGLHCTENLSVEE 202 Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265 +AA + R F R G +P Y ++ A LL +G S+ + A +L + D F Sbjct: 203 LAAWAGVHRSHFTRAFTRRYGISPSRYMQQLIMEKATRLLSAEGTSITQTALSLGYSDLF 262 Query: 266 HFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294 FS+AF FG PSA +K + Sbjct: 263 TFSRAFTRYFGMTPSAFVKANRPSSRTSE 291 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 75/251 (29%), Gaps = 22/251 (8%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV--WEQYWMEF 114 + Y +G G +++ + I + + + H + Y F Sbjct: 34 HTHDFIEISYVEEGSGYHYVED-QLIPIKRGDLFVIPIGTSHVFRPSSQDNQLVIYNCIF 92 Query: 115 -------------TPTSMMDIPVGQQSVIY------NGEIYNQELTEVAELITSPEAIKN 155 T + + G + + + + Sbjct: 93 RTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKFDKFLSIMHGMFREYLKKGPRYE 152 Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215 L + L +++ ++ I ++ +V +A S + Sbjct: 153 FLMMGQLIQVLAMLQRYECDGSMVSTPTNNMDDAIQYINDHFATNLTVQQVAERSFMSPS 212 Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275 +RLF + TG T ++ + R+ LLK S+ E A+ + + D F F+ K Sbjct: 213 HFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSLFRKKT 272 Query: 276 GYAPSAVLKNT 286 G P ++T Sbjct: 273 GVTPREYRRST 283 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 107/299 (35%), Gaps = 40/299 (13%) Query: 18 IPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLK 77 + + EN + + +L + + P + +Y G + Sbjct: 1 MRSDLWENTVMTDPAL-PINVFHPTFGIGCSLPLHW-----HEHFELIYVESGEVLYTIG 54 Query: 78 NGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEI 135 G+ ++F+ ++HS + Y + F P+ + + + ++ Sbjct: 55 -GQPFPTKPGDMLFVNSGELHSAASLNPNEPFTVYALVFNPSIL---GLKEPHIVDLVAP 110 Query: 136 YNQELTEVAELITSPEAIKNNLAVAFL--------------------TKIIYQWICLMYA 175 Y ++ +A I +++ L L ++++ W+ + Sbjct: 111 YTNGMSMIASRIEQTDSLYPLLKQTTLRLAGEFEQKPRGYELAVRSYCQLLFTWLSREFT 170 Query: 176 DGKKDP--------QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 ++ + + ++L+ L + + +R +V A+ + S R+F + TG+ Sbjct: 171 VMQRSDTEMNAFRARTNRFKELLTRLESDVAERVTVEQAASFVHMSPYHFCRMFKKITGQ 230 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 T +Y R++ A LLK SV ++A + FSK F+ G +P + K Sbjct: 231 TFVQYMNLNRINRAEYLLKNTAMSVTDIAAEIGCSSINSFSKLFRQLRGVSPRDLRKGQ 289 >UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K6_PAESJ Length = 277 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 87/275 (31%), Gaps = 20/275 (7%) Query: 29 SGISLISLWHTYADEHYRVIWPRDKKKPLIANSW-VAVYTVQGCGKILLKNGEQITLHGN 87 S SLI E P + ++ + +G G + +G+ + Sbjct: 9 SPASLIGGSEFNCHEASPFQHPLHR-----HETFSELLLVEEGRGTF-VVDGKPYEVGPG 62 Query: 88 CIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVG------QQSVIYNGE------- 134 ++ H + + F + P Q VI GE Sbjct: 63 TVLLYHRGIWHEEWSTHYPFRATYFAFKDLQVKGCPQNYFLGPDQAPVIELGEKTDETAS 122 Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLH 194 + + L E+ + A N+L L ++ P + K + Sbjct: 123 LVRECLAELHSGLAESRAAANHLFGLLLARLARLVPGESTERRIVKPAEAAVIKARGYIE 182 Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254 + QQ ++ +A S+ +L LF + G + ++ + R++ A L G V E Sbjct: 183 ENYQQPITLEQLAKVTFVSKYYLSHLFQQEVGISVIQFLIQCRMEAAKRYLIMTGRPVKE 242 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 + + + + F FK G P ++ + Sbjct: 243 IGELVGYQSEPTFHNLFKKVTGLTPGQFRESAREK 277 >UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FXH3_9FIRM Length = 298 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 10/270 (3%) Query: 24 ENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW-VAVYTVQGCGKILLKNGEQI 82 I+ +S H V + + + +++ Y + G G +L + G Sbjct: 4 RYTITHKPEEVSQNHFQVLSVNIVSYDANWHSTMHHHNFAEIFYCLDGSGYLLTEFGRT- 62 Query: 83 TLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELT 141 +H + ++ + P H+ H + + ++ + +++ E N + Sbjct: 63 PIHKHSLLLVNPFIEHTEHTSLISPLKYLVIGIKGPEIILPSHATDNGLFSFEDSNHQFY 122 Query: 142 EVAELITSPEAIKNNLAVAFLTKIIYQWICLM-------YADGKKDPQRRQIEKLIATLH 194 + + + + + + +I I + A ++ P + + Sbjct: 123 RLIREVMTECELNQPYSSQIIDHLINSLILRLNNLANSQLAMARETPLSASVSLAKHYID 182 Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254 + ++ + S L F G +P Y RL A LL +V + Sbjct: 183 NHFSKNINLEQLEERAHVSRFHLAHQFKEELGLSPINYLNQVRLTQAQELLLTTNYTVLQ 242 Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 + + + F +FS F G P A Sbjct: 243 ITEMVGFNSVSYFSNKFHEAVGMTPRAYRN 272 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 90/254 (35%), Gaps = 20/254 (7%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE--GLVWEQYWMEF 114 I + +G G L++ + + +I + P +H+ E + Sbjct: 37 HIHPFMEIFFITEGNGSFQLEDS-TVNVKEYDLIIINPNCLHTEKSNLNTSPLEYIVLGI 95 Query: 115 TPTSMMDIPVGQQ-------------SVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161 S+ + + ++ N I +L + + I + Sbjct: 96 DNFSINFFNLNNEKFSQSDSKNYHVINLKKNSSIILNQLNLIIDEIKLKNYKYEVACKSM 155 Query: 162 LTKIIYQWICLMYA----DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217 L+ I + + + +K + K+ L + + ++ ++ ++ L Sbjct: 156 LSLFILNILRTIPSMSILQNEKKNLNLECAKIKNYLDSHYSENITLETLSNLSYMNKFSL 215 Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277 F + G +P Y ++ R+ A SLL+ S+ ++ + F +S +FS+ FK + Sbjct: 216 VHAFTKQIGMSPISYLIEKRITEAKSLLETTNYSIKDIGSIVGFSNSSYFSQMFKKQTNL 275 Query: 278 APSAVLKNTDQHPT 291 +P N ++P Sbjct: 276 SPKQYKVNMIKNPK 289 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 88/258 (34%), Gaps = 29/258 (11%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTP 116 + G G + + GE + + L+ +H + E + + P Sbjct: 42 HWHDFCELAMVTGGRG-VHVLEGESFHVSTGDVFVLQGRQVHCFR-ERQGLALINVMYDP 99 Query: 117 TSMM------------DIPVGQQSVIYNGEIYNQEL----------TEVAELITSPEAIK 154 + + + ++ L + E I + Sbjct: 100 ERLPLPLGLLRRLPGYSALFMLEPTFRSTHRFSSRLRLARRELGSAEAIVERIENESKAA 159 Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRR-----QIEKLIATLHASLQQRWSVADMAAT 209 A L ++ + + L+ + R Q+ +L++ L + W++ +A Sbjct: 160 QEGHEAVLLSLLVELMVLLSRHYAQSDTRESHALLQVGQLVSMLEQRFGEPWTLEQLAEQ 219 Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269 S + L R+F + TG++P ++ + R++ A LL++ + E+A F D F + Sbjct: 220 ARVSRSNLLRMFRQATGQSPIDFLIGLRIEAARRLLRRSDLGMTEIALECGFSDGNFFPR 279 Query: 270 AFKHKFGYAPSAVLKNTD 287 F+ G PS + Sbjct: 280 QFRKTCGVTPSIYRRQMR 297 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 94/292 (32%), Gaps = 34/292 (11%) Query: 18 IPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLK 77 IP+ N + + + ++ + + + + G + + Sbjct: 2 IPIYHENNTHGTAVFPLQVYSHHDKDGFF------SVSQHWHEELEWICAEHGVLNLTV- 54 Query: 78 NGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM----------------- 120 G TLH F+ ++H G + F P + Sbjct: 55 RGRSFTLHPGEFCFINSGELHEIKSGGPSLHHA-IVFNPDILDFTLYDICQHSFIRPVTS 113 Query: 121 -DIPVGQQSVIYNGEIYNQEL---TEVAELITSPEAIKNNLAVAFLTKIIYQWIC----- 171 ++ +++ E L E+ L + + + + +I+ + Sbjct: 114 GNLIFPTLPSVFSPEESQMILFHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFL 173 Query: 172 LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 K+ + +++K+I +H + S+ D+A S + F + GK P Sbjct: 174 ENTISSKEKDSQNKLKKVIEYIHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIA 233 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283 + + R+ A +L V +VA ++ F + +F + F+ P+ Sbjct: 234 FINEYRIQKACQILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYR 285 >UniRef50_C4Z413 AraC family transcriptional regulator, arabinose operon regulatory protein n=18 Tax=Clostridiales RepID=C4Z413_EUBE2 Length = 276 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 94/246 (38%), Gaps = 11/246 (4%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKN-GEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQY 110 +P + +Y GCG + + I+ +P ++ Y + E Y Sbjct: 28 TYRPRGRVDFQIIYIAAGCGHFHFDTVDNETIVPAGNIVIFRPKELQKYEYYGEDKTEVY 87 Query: 111 WMEFTPTSMMDIP-------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163 W+ FT + + +I + + Y + + + + + L Sbjct: 88 WIHFTGSDVKNILRKYGFPDNERIFPVGTSMEYERVFKRIIIELQRCQDNYEEMLTLLLR 147 Query: 164 KIIYQWICLMYADG--KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 ++ + + + K + +++ + + + + ++ + A + S +W R F Sbjct: 148 HLLIIFQRELTREHVLKNEYLNHEMDTAVTYFNENYNRDINIEEYATSKGMSVSWFIRNF 207 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 ++TG TP ++ + R++ A LL+ S+ E++ + + + +FS+ F G +P Sbjct: 208 KKFTGSTPMQFIVALRVNNAQVLLEATNYSINEISKIVGYDNQLYFSRLFHKLKGDSPRD 267 Query: 282 VLKNTD 287 K Sbjct: 268 YRKTRK 273 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 94/268 (35%), Gaps = 11/268 (4%) Query: 29 SGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNC 88 + S ++ + HY WP P Y +G G+ L++N + ++ + Sbjct: 12 TPFSTEAVLVNASSSHYEEDWP---SIPHTHAFTELFYVSEGSGEFLIEN-QHFSIKKDD 67 Query: 89 IIFLKPMDIHS-YHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQEL---TEVA 144 +I + P H+ Y + S + + + + + L + Sbjct: 68 LIIVNPHIQHTEISLSASPLSYYTVGVDGISFSFHDQKEFQIFHYHQKHADLLFYFHSLF 127 Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRW 201 + + + L +I Q +D + P ++ + L + Sbjct: 128 QELDEKNDGYEEICKHTLAILISQLRRFAVSDFQLFPSFHPSKECALVKRYLDSHYSDDI 187 Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261 ++ +A+ ++ +L F RY G +P Y R+++ +LL+ + + ++A F Sbjct: 188 NLEQLASLSHLNKYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAHLAGF 247 Query: 262 FDSFHFSKAFKHKFGYAPSAVLKNTDQH 289 + +++F+ G ++ Sbjct: 248 SSQSYLAQSFRKYCGMTAGEYRRSKKNQ 275 >UniRef50_C4ZBP1 Two-component response regulator n=2 Tax=Clostridiales RepID=C4ZBP1_EUBR3 Length = 297 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 93/245 (37%), Gaps = 11/245 (4%) Query: 53 KKKPLIANSWVAVYTVQGCGKILLKNGE-QITLHGNCIIFLKPMDIHSYHC-EGLVWEQY 110 +P + +Y G N E + + I+ +P ++ Y + Y Sbjct: 52 TYRPRGRLDYQIIYISSGLVHFHFDNPENETIIPAGHIVLFRPKELQKYEFYGKDKTQIY 111 Query: 111 WMEFTPTSMMDIPVGQQSV-------IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163 W+ FT + + + + Y Q + + + + + L Sbjct: 112 WLHFTGSDVKNTLRKYGFTDNKRVFNVGTSLEYEQVFKRIITELQRCQDNYEEMLMLLLR 171 Query: 164 KIIYQWICLMYADG--KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221 ++ + + + + + Q++ I + + + +V + A++I S +W R F Sbjct: 172 HLLIIFNRKITTEHVIRNEFLDSQMDTAITYFNTNYNRSINVEEYASSIGMSISWFIRSF 231 Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281 +YTG TP ++ R+ A LL+ S+ E+A + + + +FS+ F + G +PS Sbjct: 232 RKYTGNTPVQFLTALRMTNAQVLLETTSYSINEIAGIVGYNNPLYFSRLFHKQKGCSPSE 291 Query: 282 VLKNT 286 Sbjct: 292 YRARN 296 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 87/300 (29%), Gaps = 38/300 (12%) Query: 15 PYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKI 74 P IP L E+ I + P++ V G G + Sbjct: 2 PEMIPTLKKEDWFHPDGFPIVV---------ERRDPQEPFGLHCHEFAEIVIITGGKG-V 51 Query: 75 LLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM------------DI 122 + + L + H Y + F P + Sbjct: 52 HITGEDSYELVTGDTFVIGGDRPHDYLNMDQ-LSLINILFDPLELPLSIGDLQSLSGYHA 110 Query: 123 PVGQQSVIYNGEIYNQELT----EVAELITSPEAIKNNLAVA-----------FLTKIIY 167 + + L E+ E + E++ L L + + Sbjct: 111 LFTLEPAWRKRHQFTSRLQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTF 170 Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227 C + + + +I + I+ + + S+ D+ S R F Sbjct: 171 LSRCYIRTRNPESKKLLRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMET 230 Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 +P +Y + R+ A LL+ S+ ++A + F DS +FS+ F+ G +P K Sbjct: 231 SPIKYLIQVRIQEASRLLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 30/255 (11%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS---------------- 99 P N + +Y +G GK + +G + L+ +F+ IHS Sbjct: 38 PHWHNEFEILYMERGIGKFYV-DGYEYKLNEGEYLFVNSGSIHSGLEMIKRSIGYAIVFD 96 Query: 100 ----YHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155 Y E + + F P + N E ++ + E+ Sbjct: 97 LRLLYSEEPDYCKHEY--FLPLINKRYHIPSN---LNDEHIRNDICRIIEVFKEKSYGYE 151 Query: 156 NLAVAFLTKIIYQ----WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211 + L I ++ + DG+ + +I+ ++ ++ + + S+ +++ + Sbjct: 152 LYIKSLLFDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVD 211 Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271 S+ +L RLF +P EY R+D A+ LL SV E+A F + +F K F Sbjct: 212 MSKFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVF 271 Query: 272 KHKFGYAPSAVLKNT 286 K P K Sbjct: 272 KKYMHTTPLKFRKQN 286 >UniRef50_C6J3G2 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3G2_9BACL Length = 289 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 98/278 (35%), Gaps = 18/278 (6%) Query: 16 YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75 NI + + S + L S+ ++ W R ++P + ++T++G G+ Sbjct: 9 ENIRYVFSSIERSLPLFLESIGYS--------AWERVFQRPEGYPYYHWLHTLEGEGRFE 60 Query: 76 LKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIY---- 131 L GE ++L + LKP HSY+ W ++ F S I Sbjct: 61 LL-GEAVSLTKGKGVLLKPFTPHSYYPVSDRWSTIYITFGGDSAASIMESLNMNTSTFYE 119 Query: 132 --NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW--ICLMYADGKKDPQRRQIE 187 + + ++ I E+ L + Q ++ +++ Sbjct: 120 EGEEQSFGALFNDLFRRIDQAESHSEIEVSTDLYYFLMQLRKFGMLNNRPSLSQYYNKLQ 179 Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS-LLK 246 ++ + L + ++A L LF + +P Y + RL A +L+ Sbjct: 180 PIVHWMEQHLADNIGLQEIAEHAHIGMNALHELFQQAFDMSPYSYLIQLRLREAKKIMLQ 239 Query: 247 QQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284 ++ EVA+ F D HF F+ K G P + Sbjct: 240 HPNRALREVAEQTGFNDVSHFVATFRKKEGITPGKYRE 277 >UniRef50_A5Z7W7 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z7W7_9FIRM Length = 334 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 97/236 (41%), Gaps = 10/236 (4%) Query: 59 ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPT 117 + +Y G + + +Q ++ I+ KP ++ Y + YW+ FT Sbjct: 81 RQDYQLLYVKHGTIYYYI-DKKQYSISAGGILIYKPSELLHYEFFLKDAPDIYWVHFTGD 139 Query: 118 SMMDIPVGQQSVIYN------GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC 171 ++ +I + Y+ ++ + + + +++ + +++Y Sbjct: 140 NVDNILGELNLSTKHAFMGTICPEYDTIFDKIISELLNRKLHFMDISSILMLELLYTISR 199 Query: 172 LMYADGKKDPQRRQI-EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230 + + I EK++ + + + S+ +A + S +WL + F ++ G +PK Sbjct: 200 DICTITYISSKNDLILEKVLEIFNTNYPNKISITSIAKELNYSSSWLSKTFTKHFGLSPK 259 Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286 Y + R++ A S+L S+ +VA+ F D +FS+ F + G PS + Sbjct: 260 AYLTNLRIEKAKSMLLST-MSIRQVAEQTGFPDQMYFSRVFTNAEGITPSQYRQKH 314 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 91/279 (32%), Gaps = 28/279 (10%) Query: 36 LWHTYADEHYRVIWPRDKKKP------LIANSWVAVYTVQGCGKILLKNGEQITLHGNCI 89 + E++ + + +P ++W Y V G G + + Sbjct: 7 PYELPEAENHSFFFIDQRTEPSLEAKLHRHDAWELYYVVHGQGN-RMAGDTLQHFEAGDV 65 Query: 90 IFLKPMDIHSYH-----CEGLVW-EQYWMEFTPTSMMDIP-------------VGQQSVI 130 + P +H + + + F + + + + Sbjct: 66 ALIPPSMLHRWEYAADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDAL 125 Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR--RQIEK 188 G + + + + + + A+ L +I+ ++A ++ R++++ Sbjct: 126 KFGPESVRVIRKTLSEMNGMDELGRLSAMFRLLPVIFTSSDHIFAGKPMRIEKNVRRMQQ 185 Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248 + A + ++ D+AA + + + F R G T ++ RL+ A LLK Sbjct: 186 ICAYVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHS 245 Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 V E+ + F D HF + F G PS K Sbjct: 246 QKGVSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRKQFK 284 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 91/269 (33%), Gaps = 20/269 (7%) Query: 38 HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97 A H PR + + + G + L NG ++ L + F+ + Sbjct: 17 FPIAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTL-NGNELKLKTGDLAFIHAGIL 75 Query: 98 HSYHCEGLVWEQYWMEFTPTSMMDIPVGQQS--VIYNGEIYNQEL-----------TEVA 144 H V+E + ++ +Q +I+N ++ N L + Sbjct: 76 HGGTPIDCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNLELQTVCNYLF 135 Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWICLMY------ADGKKDPQRRQIEKLIATLHASLQ 198 E + + + L ++ + A K + Q + +++ + Sbjct: 136 ESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQQYP 195 Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADT 258 ++ D++ + + R F T ++P +Y R++ + L S+ E+A Sbjct: 196 DPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEIALN 255 Query: 259 LNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 F D +F K FK G P LK+ Sbjct: 256 CGFNDISYFIKTFKKYKGVTPKQYLKDYH 284 >UniRef50_C2H081 AraC family transcriptional regulator n=31 Tax=Bacilli RepID=C2H081_ENTFA Length = 290 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 105/276 (38%), Gaps = 13/276 (4%) Query: 21 LINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80 + S S ++ ++ P ++ S++ +T+ G G++ + Sbjct: 15 SKRHILTPSSKSRTLFYYIQEIGQFKASRPYYTER-AHLPSYLIKFTLNGTGELRYRY-H 72 Query: 81 QITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEF----TPTSMMDI-----PVGQQSVI 130 +L + F+ D Y WE W+ F + + PV + + Sbjct: 73 TYSLQRGDLFFIDCRDYQYYQATSEEPWEMDWIHFEGGNSGAFFQEFMKNGSPVFSTNQL 132 Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG-KKDPQRRQIEKL 189 + + ++ +L A + + + +++ + + Y + + ++ Sbjct: 133 PEDNPIHLIIQQLLQLQDLQHAQTDYQSSVLIHQLLNELLLQKYRQDFTYETIPSLVLEM 192 Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249 A + ++ S+ D+A ++ L + F +Y G P +Y + ++ + LL+ Sbjct: 193 KAYIDQHFKETISLEDLAQLFHLNKYQLNKEFSKYIGLPPIKYQISKKISYSKDLLRYSN 252 Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285 +V E+A + + +FS+ FK + G PS K+ Sbjct: 253 QTVKEIAVDVGLENYAYFSRLFKKRTGLTPSQYRKS 288 >UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus RepID=B9IXY7_BACCQ Length = 286 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 97/248 (39%), Gaps = 11/248 (4%) Query: 57 LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFT 115 + +Y +G G + E+I + + +I + P H+ + E + Sbjct: 37 HAHHFTELLYITKGKGTF-IFYKEEIPVQEHNLIIVNPNIEHTEKSDTNHPLEYIALGIQ 95 Query: 116 PTSMMDIPVGQQSVIYNGEIYNQ----ELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC 171 S I I+N + + L ++ E + + + + + L ++ + + Sbjct: 96 GLSFSSIENPSPVTIHNYKQDQKNFLFYLQQLVEEVENHQEDYDLIIQNILEILLLKMMR 155 Query: 172 LMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 + +K + IE + + + S+ +A+ ++ +L F ++ G + Sbjct: 156 KKSFNVEKTSTQKINKDIEFIKNYIKQHFHENISLDTLASISHINKYYLSHSFRKFVGVS 215 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK--NT 286 P EY + R+ + LL+ S+ ++ F F+++FK + +PS N+ Sbjct: 216 PIEYLIQTRIRESKILLETTNYSISNISTITGFSSQSFFAQSFKRETNLSPSQYRNAINS 275 Query: 287 DQHPTDAS 294 ++ D+S Sbjct: 276 SKNKLDSS 283 >UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T9_EUBR3 Length = 276 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 89/239 (37%), Gaps = 8/239 (3%) Query: 56 PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114 P + + G G++L++N E + + N ++ + H+ + + Y + Sbjct: 36 PHSHHFTEIFFIKDGTGRMLIEN-ESLPVSSNSLVVIGAQVTHTEFSDPENPLDYYVLGV 94 Query: 115 TPTSMMDIPVGQQSVIY---NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC 171 + + + N Q + + + + + +L +I + Sbjct: 95 EGLKLNTDKEPEYIHVPASANSPFIRQCFENILREMHNKQDRYAEICQHYLDILILYFCR 154 Query: 172 LMYADGK---KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228 + + R+ K+ + + Q S+ +A S+ +L F GK+ Sbjct: 155 KDHVSYEVVDAQNSSRECHKVKRFIEHNYQSMISLDSLAENCSLSKYYLSHRFAELYGKS 214 Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 P Y + RL A LL +S+ E+A + F + +FS++F+ F +P K+ Sbjct: 215 PIAYLNEVRLASARDLLLTTNHSIEEIAGCIGFSSTSYFSQSFQKNFHESPQQFRKSHR 273 >UniRef50_P07642 Arabinose operon regulatory protein n=160 Tax=Proteobacteria RepID=ARAC_ERWCH Length = 310 Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 90/257 (35%), Gaps = 13/257 (5%) Query: 51 RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH--CEGLVWE 108 +P ++ T++G G+I E + ++ P H Y W Sbjct: 39 FFIDRPDGMKGYIINLTMKGQGQI-FDGDETFFCNPGDLLLFPPKSTHFYGRSPSSDCWY 97 Query: 109 QYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAEL---ITSPEAIKNNLAVAF 161 W+ F P ++ + NQ L E L I + + Sbjct: 98 HRWVYFRPRAYWADWLEWHTKSSGIGRMSLPNNQLLLEFDRLFANIEQTQRSGRRFSEEL 157 Query: 162 LTKIIYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218 ++ + + + + PQ ++ + + ++L + ++A + S + L Sbjct: 158 GMNLLERLLLRAMEEDPQSPQKIMDPRVIEACQFITSNLAGELRIDEVARHVCLSPSRLA 217 Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278 LF G + D R+ A LL+ S+ + + + D +FS+ F+ + G + Sbjct: 218 HLFREQVGINILRWREDQRVIRAKLLLQTTQESIANIGRVVGYDDQLYFSRVFRKRVGVS 277 Query: 279 PSAVLKNTDQHPTDASP 295 PS + + + A+ Sbjct: 278 PSDFRRRSSEINYPAAK 294 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 91/271 (33%), Gaps = 29/271 (10%) Query: 45 YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104 YR + Y ++G + + + + +F+ DIH+ H G Sbjct: 27 YRYGPGEHVIDCHWHDEAEFFYCLEGE-TLFQVDTDYFPVGAGEAVFIDGGDIHAAHAHG 85 Query: 105 L-VWEQYWMEFTPTSMMD-----------IPVGQQSVIYNGEIYNQ------ELTEVAEL 146 + + F + +P+ ++ + I + L + L Sbjct: 86 DQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRETAADLSLLEHIVAL 145 Query: 147 ITS---PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR-------RQIEKLIATLHAS 196 + S L ++ + A + +++ +I + + Sbjct: 146 MRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKIDRLKTVIQHIQHN 205 Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256 +A++AA IP SE R F T +TP +Y R+ A LL++ + ++A Sbjct: 206 YSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAELLREPERKISDIA 265 Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287 + F + +F + F+ +PS K Sbjct: 266 LEVGFDNISYFIRVFRKAMNCSPSEFRKRLQ 296 >UniRef50_UPI0001C37EF8 AraC family transcriptional regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37EF8 Length = 287 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 94/237 (39%), Gaps = 9/237 (3%) Query: 60 NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTP-- 116 +S++ V+G G++ + + L +F+ E WE W+ F Sbjct: 52 DSFLIAAVVRGRGELAVGDERS-PLVQGDCLFIDCQQSFICKSSESEPWEIIWVYFNGCT 110 Query: 117 -TSMMDIPVGQQSVIYNGEIYNQE---LTEVAELITSPEAIKNNLAVAFLTKIIYQWICL 172 ++ ++ +++ +TE+A L + L + I+ + Sbjct: 111 SKQYHELFSANTGSVFRPVSFDKVVTAITEIASLCGEETRNSDILCSKQIMDILTIALTS 170 Query: 173 MYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231 A+ + D RR++ + + + + S+ +++ S+ +L R + + G+T + Sbjct: 171 DAAEEQYDSGLRRKLAMVNSYIDDHFSEDLSLERLSSEFYISKFYLTREYKKIYGRTIFQ 230 Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288 + ++ R++ LL+ S+ E+A F D +F++ FK + K + Sbjct: 231 HIINVRINYGKKLLRFSDRSIDEIAHMCGFNDQSYFARQFKKAENLTCFSYRKKWRE 287 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.161 0.487 Lambda K H 0.267 0.0492 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,111,231,023 Number of Sequences: 3077464 Number of extensions: 121391793 Number of successful extensions: 377430 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 18388 Number of HSP's successfully gapped in prelim test: 1830 Number of HSP's that attempted gapping in prelim test: 320025 Number of HSP's gapped (non-prelim): 26932 length of query: 297 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 169 effective length of database: 646,480,964 effective search space: 109255282916 effective search space used: 109255282916 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 93 (40.2 bits)