BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (297 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P31449 Uncharacterized HTH-type transcriptional regulat...   624   e-177
UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=P...    83   1e-14
UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp....    81   4e-14
UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bactero...    78   4e-13
UniRef50_A6C8L8 Helix-turn-helix, AraC type n=1 Tax=Planctomyces...    77   5e-13
UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococ...    77   9e-13
UniRef50_UPI000174610C response regulator receiver domain protei...    75   2e-12
UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=P...    73   1e-11
UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=C...    73   1e-11
UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family prot...    73   1e-11
UniRef50_Q47XU2 Transcriptional regulator, AraC family n=1 Tax=C...    72   3e-11
UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ...    71   5e-11
UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=D...    70   8e-11
UniRef50_Q0SVI3 DNA-binding response regulator, AraC family n=9 ...    69   1e-10
UniRef50_B9KTR6 Transcriptional regulator, AraC family n=2 Tax=R...    69   2e-10
UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 ...    69   2e-10
UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=La...    69   3e-10
UniRef50_UPI0001C34C27 transcriptional regulator, AraC family pr...    69   3e-10
UniRef50_A6VZ04 Helix-turn-helix-domain containing protein AraC ...    68   3e-10
UniRef50_D1N947 Transcriptional regulator, AraC family n=1 Tax=V...    68   3e-10
UniRef50_C6D7G4 Transcriptional regulator, AraC family n=1 Tax=P...    68   3e-10
UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevi...    68   4e-10
UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=L...    68   4e-10
UniRef50_A3TV05 Putative transcriptional regulator n=1 Tax=Ocean...    68   4e-10
UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C...    68   4e-10
UniRef50_C4DTW1 Transcriptional regulator containing an amidase ...    68   5e-10
UniRef50_B0KFJ0 Transcriptional regulator, AraC family n=2 Tax=P...    68   5e-10
UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P...    67   5e-10
UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabac...    67   5e-10
UniRef50_C7MF03 DNA-binding domain-containing protein, AraC-type...    67   6e-10
UniRef50_A4BIK9 AraC-type DNA-binding domain-containing protein ...    67   6e-10
UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10 Tax=...    67   7e-10
UniRef50_A0L3B8 Transcriptional regulator, AraC family n=2 Tax=G...    67   7e-10
UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bactero...    67   8e-10
UniRef50_B9K0A2 Transcriptional regulator AraC family n=18 Tax=R...    67   8e-10
UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=P...    67   9e-10
UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 T...    67   1e-09
UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides R...    67   1e-09
UniRef50_A0Z695 Transcriptional regulator, AraC family protein n...    66   1e-09
UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n...    66   1e-09
UniRef50_A9WHL1 Helix-turn-helix-domain containing protein AraC ...    66   1e-09
UniRef50_C9D180 Helix-turn-helix-domain containing protein, AraC...    66   2e-09
UniRef50_Q3M1N4 Transcriptional Regulator, AraC family n=1 Tax=A...    66   2e-09
UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Ta...    66   2e-09
UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C...    65   3e-09
UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon tra...    65   3e-09
UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=P...    65   3e-09
UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R...    65   3e-09
UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella ori...    65   3e-09
UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=P...    65   4e-09
UniRef50_D0DCB7 Helix-turn-helix-domain containing protein, AraC...    65   4e-09
UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n...    65   4e-09
UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecali...    65   4e-09
UniRef50_B6R353 Phosphoribosylaminoimidazole carboxylase, ATPase...    64   5e-09
UniRef50_A7NLR2 Transcriptional regulator, AraC family n=2 Tax=C...    64   5e-09
UniRef50_Q1QYW4 Transcriptional regulator, AraC family with amid...    64   6e-09
UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostri...    64   6e-09
UniRef50_B8CZL9 Response regulator receiver protein n=1 Tax=Halo...    64   6e-09
UniRef50_A0B2M7 Transcriptional regulator, AraC family with amid...    64   7e-09
UniRef50_B2S6F3 Transcriptional regulator, ARAC family n=48 Tax=...    64   7e-09
UniRef50_Q2CGL8 Transcriptional regulator, AraC family protein n...    64   7e-09
UniRef50_B1JB07 Transcriptional regulator, AraC family n=1 Tax=P...    64   7e-09
UniRef50_A8TRB7 Probable transcriptional regulator n=1 Tax=alpha...    64   7e-09
UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales ...    64   7e-09
UniRef50_A3W1D7 Transcriptional regulator, AraC family protein n...    64   7e-09
UniRef50_B4WW69 Transcriptional regulator, AraC family protein n...    64   8e-09
UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostri...    64   9e-09
UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=S...    64   9e-09
UniRef50_A3SJ23 Transcriptional regulator, AraC family protein n...    64   9e-09
UniRef50_B4D5Y6 Transcriptional regulator, AraC family n=1 Tax=C...    63   1e-08
UniRef50_B1F7R4 Transcriptional regulator, AraC family n=1 Tax=B...    63   1e-08
UniRef50_Q1QUP9 Transcriptional regulator, AraC family with amid...    63   1e-08
UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=J...    63   1e-08
UniRef50_C6BZV3 Transcriptional regulator, AraC family n=1 Tax=D...    63   1e-08
UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali...    63   1e-08
UniRef50_C6CVX7 Transcriptional regulator, AraC family n=1 Tax=P...    63   2e-08
UniRef50_A6CZ62 Transcriptional Regulator, AraC family protein n...    62   2e-08
UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=P...    62   2e-08
UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=V...    62   2e-08
UniRef50_Q2BYZ8 Transcriptional regulator, AraC family protein n...    62   2e-08
UniRef50_D1N8U7 Transcriptional regulator, AraC family n=1 Tax=V...    62   2e-08
UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales ...    62   2e-08
UniRef50_A7VPJ2 Putative uncharacterized protein n=1 Tax=Clostri...    62   2e-08
UniRef50_A6E5Z6 Probable transcriptional regulator n=1 Tax=Roseo...    62   2e-08
UniRef50_Q0SE50 Transcriptional regulator, AraC family protein n...    62   2e-08
UniRef50_A1B7U6 Transcriptional regulator, AraC family n=5 Tax=A...    62   2e-08
UniRef50_C2AR01 DNA-binding domain-containing protein, AraC-type...    62   2e-08
UniRef50_B5XWK6 Transcriptional regulator, AraC family n=5 Tax=K...    62   2e-08
UniRef50_Q1GGF5 Transcriptional regulator, AraC family with amid...    62   3e-08
UniRef50_C0A9I7 AraC-type DNA-binding domain-containing protein-...    62   3e-08
UniRef50_C6B4M4 Transcriptional regulator, AraC family n=8 Tax=R...    62   3e-08
UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n...    62   3e-08
UniRef50_A8LK68 HTH-type transcriptional regulator n=43 Tax=Rhod...    62   3e-08
UniRef50_A9C0Z2 Transcriptional regulator, AraC family n=1 Tax=D...    62   3e-08
UniRef50_Q7UU29 Probable lactose operon transcription activator ...    62   3e-08
UniRef50_Q3IVG7 Transcriptional regulator, AraC family with amid...    62   3e-08
UniRef50_A7B5D7 Putative uncharacterized protein n=1 Tax=Ruminoc...    62   3e-08
UniRef50_D1N547 Transcriptional regulator, AraC family n=1 Tax=V...    61   4e-08
UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R...    61   4e-08
UniRef50_D2PRH8 Transcriptional regulator, AraC family n=1 Tax=K...    61   4e-08
UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=C...    61   4e-08
UniRef50_Q2S8T9 AraC-type DNA-binding domain-containing protein ...    61   4e-08
UniRef50_P43465 Raffinose operon transcriptional regulatory prot...    61   4e-08
UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopi...    61   4e-08
UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales ...    61   5e-08
UniRef50_B2JCG9 Transcriptional regulator, AraC family n=52 Tax=...    61   5e-08
UniRef50_B9XCC3 Transcriptional regulator, AraC family n=1 Tax=b...    61   5e-08
UniRef50_C9YV93 Putative transcriptional regulator n=2 Tax=Strep...    61   5e-08
UniRef50_C6JDE0 Putative uncharacterized protein n=1 Tax=Ruminoc...    61   6e-08
UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostri...    61   6e-08
UniRef50_C1DME1 Transcriptional regulator AraC family n=1 Tax=Az...    60   6e-08
UniRef50_Q1QTP1 Transcriptional regulator, AraC family with amid...    60   7e-08
UniRef50_Q01W15 Transcriptional regulator, AraC family n=1 Tax=C...    60   7e-08
UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=...    60   7e-08
UniRef50_B4S2K8 Transcriptional regulator, AraC family protein n...    60   7e-08
UniRef50_D1W357 Transcriptional regulator, AraC family n=2 Tax=B...    60   8e-08
UniRef50_UPI0001789679 transcriptional regulator, AraC family n=...    60   8e-08
UniRef50_UPI0001788616 transcriptional regulator, AraC family n=...    60   8e-08
UniRef50_A7LRR5 Sensor protein n=2 Tax=Bacteroides RepID=A7LRR5_...    60   8e-08
UniRef50_C6D094 Transcriptional regulator, AraC family n=1 Tax=P...    60   9e-08
UniRef50_A8TQD3 Transcriptional regulator, AraC family protein n...    60   9e-08
UniRef50_Q1R055 Transcriptional regulator, AraC family with amid...    60   1e-07
UniRef50_B4D0H6 Transcriptional regulator, AraC family n=1 Tax=C...    60   1e-07
UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacilla...    60   1e-07
UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=D...    60   1e-07
UniRef50_B9NXI5 Transcriptional regulator, AraC family n=2 Tax=R...    60   1e-07
UniRef50_UPI0001C43064 probable transcriptional regulator n=1 Ta...    60   1e-07
UniRef50_D0YX71 Transcriptional regulator AraC family protein n=...    60   1e-07
UniRef50_Q2RUD8 Transcriptional regulator, AraC family n=1 Tax=R...    60   1e-07
UniRef50_B8DGU9 Transcriptional regulator, AraC family n=2 Tax=F...    60   1e-07
UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri...    60   1e-07
UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1...    60   1e-07
UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=R...    60   1e-07
UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L...    60   1e-07
UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto...    60   1e-07
UniRef50_C9A3L0 Transcriptional regulator n=1 Tax=Enterococcus g...    59   1e-07
UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero...    59   1e-07
UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS fami...    59   1e-07
UniRef50_B6QZZ9 Transcriptional regulator, AraC family n=1 Tax=P...    59   1e-07
UniRef50_B9Y348 Putative uncharacterized protein n=1 Tax=Holdema...    59   1e-07
UniRef50_Q1MGU4 Putative AraC family transcriptional regulator n...    59   2e-07
UniRef50_A4Z280 Putative transcriptional regulator, AraC family ...    59   2e-07
UniRef50_D1N1T4 Transcriptional regulator, AraC family n=1 Tax=V...    59   2e-07
UniRef50_C6C8M9 Transcriptional regulator, AraC family n=44 Tax=...    59   2e-07
UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostri...    59   2e-07
UniRef50_D1NAQ6 Transcriptional regulator, AraC family n=1 Tax=V...    59   2e-07
UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=...    59   2e-07
UniRef50_A1WQ59 Transcriptional regulator, AraC family with amid...    59   2e-07
UniRef50_Q98JA7 Probable transcriptional regulator n=1 Tax=Mesor...    59   2e-07
UniRef50_D1N4A3 Transcriptional regulator, AraC family n=1 Tax=V...    59   2e-07
UniRef50_B5JKR9 Transcriptional regulator, AraC family protein n...    59   2e-07
UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=D...    59   2e-07
UniRef50_C5RDR5 Transcriptional regulator, AraC family n=2 Tax=C...    59   2e-07
UniRef50_C0DSD5 Putative uncharacterized protein n=1 Tax=Eikenel...    59   2e-07
UniRef50_A8IE82 Transcriptional regulator n=3 Tax=Alphaproteobac...    59   2e-07
UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=C...    59   2e-07
UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 T...    59   2e-07
UniRef50_D2PPT5 Transcriptional regulator, AraC family n=1 Tax=K...    59   2e-07
UniRef50_B9TGZ7 Putative uncharacterized protein n=1 Tax=Ricinus...    59   2e-07
UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=C...    59   2e-07
UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type...    59   2e-07
UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C...    59   2e-07
UniRef50_Q1YY61 Hypothetical transcriptional regulator, AraC/Xyl...    59   2e-07
UniRef50_A3YAS0 Transcriptional regulator, AraC family protein n...    59   3e-07
UniRef50_C9P3F6 Signal transduction histidine kinase n=2 Tax=Vib...    59   3e-07
UniRef50_B1M000 Transcriptional regulator, AraC family n=7 Tax=M...    59   3e-07
UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacteriu...    59   3e-07
UniRef50_B5GM94 Helix-turn-helix domain-containing protein n=1 T...    58   3e-07
UniRef50_A7JVV0 Possible AraC family transcriptional regulator n...    58   3e-07
UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=C...    58   3e-07
UniRef50_B6AWE3 Transcriptional regulator, AraC family n=1 Tax=R...    58   3e-07
UniRef50_Q989Y4 Transcriptional regulator n=2 Tax=Rhizobiales Re...    58   3e-07
UniRef50_C8SL33 Transcriptional regulator, AraC family n=2 Tax=M...    58   3e-07
UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bactero...    58   4e-07
UniRef50_C1D8X9 Putative uncharacterized protein n=1 Tax=Laribac...    58   4e-07
UniRef50_D1XPD5 Transcriptional regulator, AraC family n=1 Tax=S...    58   4e-07
UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=L...    58   4e-07
UniRef50_Q2CGN3 Transcriptional regulator, AraC/XylS family prot...    58   4e-07
UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri...    58   4e-07
UniRef50_Q89ME0 Transcriptional regulatory protein n=1 Tax=Brady...    58   4e-07
UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=B...    58   4e-07
UniRef50_A3YG62 Transcriptional regulator, AraC family protein n...    58   4e-07
UniRef50_Q7MDX7 AraC-type DNA-binding domain-containing protein ...    58   4e-07
UniRef50_D1N130 Transcriptional regulator, AraC family n=1 Tax=V...    58   4e-07
UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n...    58   4e-07
UniRef50_C6CVN2 Transcriptional regulator, AraC family n=1 Tax=P...    58   4e-07
UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumil...    58   5e-07
UniRef50_A9D0S3 Transcription regulator n=3 Tax=Phyllobacteriace...    58   5e-07
UniRef50_Q01Y24 Transcriptional regulator, AraC family n=2 Tax=A...    58   5e-07
UniRef50_B9JE85 Transcriptional regulator protein n=1 Tax=Agroba...    58   5e-07
UniRef50_B7VRW6 Putative AraC-family transcriptional regulatory ...    58   5e-07
UniRef50_Q0FAD1 Transcriptional regulator, AraC family protein n...    58   5e-07
UniRef50_C6XTD1 Cyclic nucleotide-binding n=1 Tax=Pedobacter hep...    58   5e-07
UniRef50_Q2GAB8 Transcriptional regulator, AraC family n=1 Tax=N...    58   5e-07
UniRef50_C6VNH1 Transcription regulator n=3 Tax=Lactobacillus pl...    57   5e-07
UniRef50_A9FWP2 Transcriptional regulator, AraC family n=1 Tax=S...    57   5e-07
UniRef50_D1V7I4 Transcriptional regulator, AraC family n=2 Tax=A...    57   5e-07
UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas Re...    57   6e-07
UniRef50_B5WL81 Transcriptional regulator, AraC family n=1 Tax=B...    57   6e-07
UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac...    57   6e-07
UniRef50_D0LBD5 Helix-turn-helix-domain containing protein AraC ...    57   6e-07
UniRef50_D1N7S2 Transcriptional regulator, AraC family n=2 Tax=V...    57   6e-07
UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n...    57   6e-07
UniRef50_Q1QE65 Transcriptional regulator, AraC family n=1 Tax=P...    57   6e-07
UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C...    57   6e-07
UniRef50_A1AM63 Transcriptional regulator, AraC family n=1 Tax=P...    57   6e-07
UniRef50_Q9K6M6 Transcriptional regulator n=1 Tax=Bacillus halod...    57   7e-07
UniRef50_C7QI96 Transcriptional regulator, AraC family n=1 Tax=C...    57   7e-07
UniRef50_C1D3S3 Putative transcriptional regulator, AraC family ...    57   7e-07
UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=V...    57   7e-07
UniRef50_C2FW53 AraC family transcriptional regulator n=2 Tax=Sp...    57   7e-07
UniRef50_A8HRE8 Transcriptional regulator n=3 Tax=Alphaproteobac...    57   7e-07
UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C...    57   7e-07
UniRef50_C6CXM1 Transcriptional regulator, AraC family n=2 Tax=P...    57   8e-07
UniRef50_C6JDE2 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_3...    57   8e-07
UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostri...    57   8e-07
UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=G...    57   8e-07
UniRef50_C2AR91 DNA-binding domain-containing protein, AraC-type...    57   8e-07
UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E...    57   8e-07
UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-...    57   8e-07
UniRef50_D1N759 Transcriptional regulator, AraC family n=1 Tax=V...    57   9e-07
UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=C...    57   9e-07
UniRef50_UPI000197B404 hypothetical protein BACCOPRO_02224 n=1 T...    57   9e-07
UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=D...    57   9e-07
UniRef50_C0Z8E4 Probable transcriptional regulator n=1 Tax=Brevi...    57   9e-07
UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=C...    57   9e-07
UniRef50_Q4A0B7 Putative transcriptional regulator n=1 Tax=Staph...    57   9e-07
UniRef50_B6W1X0 Sensor protein n=6 Tax=Bacteroides RepID=B6W1X0_...    57   9e-07
UniRef50_B5ZT32 Transcriptional regulator, AraC family n=9 Tax=R...    57   1e-06
UniRef50_C3JN73 Transcriptional regulator, AraC family n=1 Tax=R...    57   1e-06
UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=...    57   1e-06
UniRef50_C5BRT4 Helix-turn-helix-domain containing protein, AraC...    57   1e-06
UniRef50_B9Z8M5 Transcriptional regulator, AraC family n=1 Tax=L...    57   1e-06
UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C...    57   1e-06
UniRef50_Q1QSP4 Transcriptional regulator, AraC family with amid...    57   1e-06
UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostri...    57   1e-06
UniRef50_C5AH65 Transcriptional regulator, AraC family protein n...    57   1e-06
UniRef50_A1R3X3 Transcriptional regulator, AraC family domain n=...    57   1e-06
UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus s...    56   1e-06
UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco...    56   1e-06
UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 T...    56   1e-06
UniRef50_A6LQ44 Helix-turn-helix-domain containing protein, AraC...    56   1e-06
UniRef50_A4WA52 Transcriptional regulator, AraC family n=10 Tax=...    56   1e-06
UniRef50_C0AA65 AraC-type DNA-binding domain-containing protein-...    56   1e-06
UniRef50_D1T3G0 Transcriptional regulator, AraC family n=1 Tax=A...    56   1e-06
UniRef50_C1D5R0 Activator protein MtlR n=1 Tax=Laribacter hongko...    56   1e-06
UniRef50_Q1QY53 Transcriptional regulator, AraC family n=1 Tax=C...    56   1e-06
UniRef50_C7G8V7 Putative raffinose operon transcriptional regula...    56   1e-06
UniRef50_C7PCD4 Transcriptional regulator, AraC family n=1 Tax=C...    56   1e-06
UniRef50_UPI000178A031 transcriptional regulator, AraC family n=...    56   1e-06

>UniRef50_P31449 Uncharacterized HTH-type transcriptional regulator yidL n=55
           Tax=Enterobacteriaceae RepID=YIDL_ECOLI
          Length = 297

 Score =  624 bits (1609), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/297 (100%), Positives = 297/297 (100%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN
Sbjct: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120
           SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM
Sbjct: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120

Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180
           DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD
Sbjct: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
           PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL
Sbjct: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297
           ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN
Sbjct: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297


>UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CSQ7_PAESJ
          Length = 285

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 28/281 (9%)

Query: 17  NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76
           NIP ++ E           +W   AD  Y+V  P     P +  +W      +G G I L
Sbjct: 18  NIPYVLEELPPQPPCRFQLIWKVQADIAYQVANPTGFSSPGLFATW------EGKGVITL 71

Query: 77  KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM---MDIPVGQQSVIYNG 133
              EQ  L     I + P    +Y C    W+ Y++EF    M   +++PVG        
Sbjct: 72  -GSEQHELVAGTYIIVPPDTPTAYRCLNGNWKFYFLEFDSLDMALGLNLPVGI------- 123

Query: 134 EIYNQELTEVAELITSPEAIKNNLAV-----AFLTKIIYQWICLMYADGK---KDPQRRQ 185
            +   ++ E A +    E + NNL +     A+ + +  Q + L++A  +   +  +  +
Sbjct: 124 PVSTAKMAEAARMN---ERLINNLIMKPAGYAYDSHLAMQELLLLFARERHANRSGRHPE 180

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           ++ ++  +H ++ Q + +         S       F   TG +P +Y  + +L  A + L
Sbjct: 181 LDDILYRMHQTIGQAFPIEKWVQQSGLSRNAFFTRFRERTGMSPNQYMQELKLAAAKTSL 240

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           +    SV E+A  L F+D FHFSK FK ++G +P A  ++ 
Sbjct: 241 ETTQASVKEIAAALQFYDEFHFSKLFKKRYGMSPRAYRRDA 281


>UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp. BAL39
           RepID=A6EEZ9_9SPHI
          Length = 306

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 117/272 (43%), Gaps = 24/272 (8%)

Query: 30  GISLISLWHT-------YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82
           G++++++ H        Y D H+  ++  D  K  I   +  +Y  +G G    +    +
Sbjct: 24  GVNILNVGHNIHPGKLKYPDPHHPNLYCFDWSKGRILEEYQLIYIAKGSGTFESEQVGSV 83

Query: 83  TLHGNCIIFLKPMDIHSYHC---EGLVWEQYWMEFTPT-----SMMDIPVGQQSVIYNGE 134
            +H   ++ L P   H Y     EG  WE+YW+ F  +        D       +I+ G 
Sbjct: 84  VVHPGTVLLLFPNIWHRYKPHDDEG--WEEYWVGFNGSYASYLMQQDCFDPHAPLIHMG- 140

Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-----DPQRRQIEKL 189
            +N E   V   +      +        + +  Q + L+YA   +     D + + I  +
Sbjct: 141 -FNSEFINVFIRLIDTLKFEGVAFAQLSSSLTTQLLGLVYASALQKEKVMDRKEQVINNI 199

Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249
              +H +L    ++ ++A+    S AW R+ F    G +P +Y L+ +L+ A  ++++  
Sbjct: 200 RYKIHENLSNCATLEELASQHNVSYAWFRKTFKEVVGVSPGQYQLNLKLEKAARMIRETQ 259

Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
            S+ E+A    F    HFSK FK K G +PSA
Sbjct: 260 MSISEIAFVNGFVSEHHFSKIFKKKMGVSPSA 291


>UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis
           DSM 17393 RepID=B3C7N6_9BACE
          Length = 292

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 25/280 (8%)

Query: 14  TPYNIPLLINENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72
           TPYNI  L  EN I+  + +  + ++ +A+ H+R    R+K      N  V +Y   GCG
Sbjct: 16  TPYNIRNLQRENNITKQLFVSHIGYYPHAENHFR---EREKG----TNENVFIYCESGCG 68

Query: 73  KILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTP--TSMMDIPVGQQSV 129
            +  K GE+  L  N    L   + H+Y  + +  W  YW+ F     +M    +G+   
Sbjct: 69  WVSYK-GEKYILTKNQAFILPANEQHAYGADEVNPWSIYWLHFCGEGVAMFSSIIGKAIS 127

Query: 130 IYNGEIYN--------QELTEVAELITSPEAIK--NNLAVAFLTKIIYQWICLMYADGKK 179
           +   +           +E+ +  E+  SPE ++  +   + FL  + Y      + + KK
Sbjct: 128 LEESDKSRYDDRFQLFEEMYQNLEMGYSPENLEYVSFCLMHFLASLKY---INQFREIKK 184

Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239
             +   I+K I+ +  +++ + ++ D+A  +  S +    LF   T   P EYY   ++ 
Sbjct: 185 VRETDFIQKSISFMKENMENKITLEDIAQHVGYSASHFSALFSERTSYAPMEYYNQLKIQ 244

Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            A S L+     + E+A  L ++D FHFSKAF  +    P
Sbjct: 245 RACSFLQFSDLKIKEIAFRLGYYDQFHFSKAFNKEMEITP 284


>UniRef50_A6C8L8 Helix-turn-helix, AraC type n=1 Tax=Planctomyces maris DSM 8797
           RepID=A6C8L8_9PLAN
          Length = 246

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 3/115 (2%)

Query: 170 ICLMYADGKKDPQRR---QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226
           + LM+ +  +  QRR   ++ K++  + A+  Q   ++++A  +  SE  LRRLF    G
Sbjct: 127 VRLMFPEADRGTQRRLDDRLRKVVRLIEAAPDQNHRISELAEIVGLSEPHLRRLFREQMG 186

Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           ++PK++    R++ A  L++Q+G  VGEVA  L F   F FS  ++   G+ PSA
Sbjct: 187 ESPKQFLRRTRMEFARRLMQQEGLRVGEVAHLLGFASVFQFSAQYRQVLGHPPSA 241


>UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococcus
           RepID=MSMR_STRMU
          Length = 278

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 117/243 (48%), Gaps = 18/243 (7%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV--WEQYWME 113
           P I +++V  + ++G GK+ +         G+  IFL P DI +++   L   W   W+ 
Sbjct: 35  PTIRDNYVIHFILEGKGKLTINQHTLDLAAGD--IFLLPKDISTFYQADLQMPWSYIWIG 92

Query: 114 FTPTSMMDIPVGQQSVIY---------NGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164
           F+ +   +I   +QS ++         + ++++Q +T +    T   ++   L V  L K
Sbjct: 93  FSGSKAENIL--KQSSLFKRFYCHSGRSSKLFSQMMTIIQFANTPLTSVNELLMVGELYK 150

Query: 165 IIYQWI---CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
           ++   I    L + +      +  + ++   +H+       V D+A  +  S ++L ++F
Sbjct: 151 LLAALIEEFPLSHLEESNSSTKAYVNQVKKIIHSQYGSSLRVNDIAKKLNLSRSYLYKIF 210

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
            + T  + KEY L  R+  +  LL+    S+ E+++++ F DS  FSKAFK+ FG +PS 
Sbjct: 211 RKSTNLSIKEYILQVRMKRSQYLLENPKLSIAEISNSVGFSDSLAFSKAFKNYFGKSPSK 270

Query: 282 VLK 284
             K
Sbjct: 271 FRK 273


>UniRef50_UPI000174610C response regulator receiver domain protein (CheY-like) n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI000174610C
          Length = 280

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 14/227 (6%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT 117
           A S++   T  G G++LL +G    +    +    P  ++++H EG  VW   W+ +   
Sbjct: 58  AGSFILACTA-GKGRVLL-DGRWQRVGAGMVCMAPPRVLNAFHAEGAEVWRFAWLRYDEP 115

Query: 118 SMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177
           + +   VG  S +   E   +    +  L T  E  ++        K+++ WI L +   
Sbjct: 116 AFVSPMVGASSPVLAAEGAMEIARAIDGLRTEWEGHRD-------PKLLHHWIELAHGLA 168

Query: 178 KKDPQRRQIEKLIATLHASLQQ----RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233
           ++  Q  ++E  + TL  S+QQ     W++  +A     S   LRR+  R  G++P ++ 
Sbjct: 169 RRAAQPFEMEARLWTLWTSVQQSLAEEWTLESLARAYHSSGEHLRRVCQRELGRSPMQHL 228

Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
              R+  A  LL+   + V  VA  + + D   FS+AFK   G APS
Sbjct: 229 TYMRMQRARQLLETTSDKVEVVAGEVGYRDGLVFSRAFKRWVGCAPS 275


>UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D1A4_PAESJ
          Length = 284

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 18/242 (7%)

Query: 54  KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWME 113
           ++P  +  W+ +YTV G G++   N   +T     I  L P   H Y  +G  WE  W+ 
Sbjct: 33  QRPSGSRDWLLMYTVSGEGQVQKNNQSTVTCGAGDIAVLMPGIPHHYGTKGTSWEFIWVH 92

Query: 114 FTP----TSMMDIPVGQQSVIYN----GEIYNQELTEVAELI-----TSPEAIKNNLA-V 159
           F P    ++ + +P   + + +     G+  +     +A ++          +   LA +
Sbjct: 93  FIPDPEWSTWLRLPGSDERLFFRHVGKGDSRDSIHEALARMVRHETSAGSSRLHRRLAEM 152

Query: 160 AFLTKIIY-QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218
           A    +IY Q  C   +    DP+   I +++  L  S  QR S+ ++A     S + L 
Sbjct: 153 ALEETLIYIQQTCPAESAVTMDPR---IAQILRELQLSPAQRISLPELAKKSCLSTSRLS 209

Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278
            LF    G T        RL+ A  LL      + E+A  + F  + +F++ FK  FG  
Sbjct: 210 HLFKEQVGDTVLNVLCKIRLEKAAQLLTGTNRQITEIASDVGFDCTIYFTRKFKETFGET 269

Query: 279 PS 280
           PS
Sbjct: 270 PS 271


>UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=Clostridium
           RepID=B8I1T1_CLOCE
          Length = 265

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 122/272 (44%), Gaps = 21/272 (7%)

Query: 16  YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75
           +NIPLL           LI  W +    H+    P  ++  LI       Y V G G + 
Sbjct: 2   HNIPLL--NKGFEEVNPLICGWQSCDKGHF--FGPASREYYLIH------YVVSGSG-VF 50

Query: 76  LKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGE 134
            + G++  L  +C+  ++P ++  Y  +    WE  W+ F  + + D+    ++  ++ +
Sbjct: 51  ERAGKRYPLSKDCLFLIRPYELTFYKADKENPWEYIWIGFDGSLVPDL---LKNSGFSDD 107

Query: 135 IYNQELTEVAELITSPEAIKN--NLAVAFLTKIIYQWICLMYADGKKDPQRRQ----IEK 188
           I    +  ++    S + ++N  + +  FL   I++    +  +    P+        ++
Sbjct: 108 ICTMHIPSLSTTFLSMKEVENLQHSSEIFLCGKIFEMFSYLSEEFSPTPKGSTTSVYCKR 167

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
               + ++     SV  +A  +     +L R+F +YTG TP+ + ++ RL+ A  LL + 
Sbjct: 168 AKDYIMSNYANHISVESIANMLGIDRRYLCRIFYKYTGSTPQNFIVNYRLEKAAFLLSKH 227

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           G +V E   +  + D ++FSK FK K+G  PS
Sbjct: 228 GYTVAEAGRSTGYDDIYNFSKMFKKKYGVPPS 259


>UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family protein n=1
           Tax=Lentisphaera araneosa HTCC2155 RepID=A6DM00_9BACT
          Length = 282

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 28/290 (9%)

Query: 2   NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61
           N  L   ++  E PY +     E V+SS               YR  W   K+  L    
Sbjct: 12  NTNLFFKNINFELPYKLLNFGRERVVSSD--------------YR--WHGLKRGKLETAI 55

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL--VWEQYWMEFTPTSM 119
           W   YT+ G GK L  N    T+  +  + +   D H Y  + +   WE  ++ F  T +
Sbjct: 56  WQ--YTLSGSGK-LRSNNTTYTIQPHQAMLVTSPDDHEYFFDSMDSHWEFIYLSFCGTDL 112

Query: 120 MDI---PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
           +      + + S + +  I ++ ++   +L  +P    +   V   +++ YQ+I  ++ +
Sbjct: 113 VQHYKNLIAKTSPVCSLPINSKLISLFLQLTQNPHLSDSQTQVQH-SQLCYQFIMELHQE 171

Query: 177 ---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233
               K+ P  + I+ ++  ++  L Q  S+ +MA+    S     R+F +  G +P EY 
Sbjct: 172 ILADKQKPLPQAIQNVLNHINHHLNQAISIDEMASVAKLSRYHFSRVFSKAIGISPNEYL 231

Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           +  +++ A  LL  Q  SV ++A    + D  +F K FK  FG++P A L
Sbjct: 232 IKTKMEYAQKLLFTQNLSVKQLAHECGYHDPSYFCKVFKKHFGHSPKADL 281


>UniRef50_Q47XU2 Transcriptional regulator, AraC family n=1 Tax=Colwellia
           psychrerythraea 34H RepID=Q47XU2_COLP3
          Length = 305

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 4/219 (1%)

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPV 124
           + T  G GKI L N E +   G+ I+ L       Y   G  WE  W+     S      
Sbjct: 67  ISTHAGEGKIKLGNNEYLVKPGS-IVLLPAGTPFLYELSGEYWEMCWLLLHDCSEYKFVH 125

Query: 125 GQQSVIY---NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP 181
                +Y   N E   Q ++ + E        ++++ +  +  ++YQ    +    +   
Sbjct: 126 QLHPSVYSSINAERLYQTMSLIREFQHGESIYQSDIILRLVEVLVYQIAQTLNMGQQLTK 185

Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241
           Q+++   LI  ++  LQ  W+V  +AA +  SE    RL  +  G TP +     RL+ A
Sbjct: 186 QQQKFHSLIRRVNKQLQLSWTVKQLAAEMHMSEPHFFRLCKKEMGMTPIKLLTHTRLEYA 245

Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
             LL+    ++ ++ADT+ + DS  F+  FK  +G +P 
Sbjct: 246 CYLLRYTQYNLDQIADTVGYGDSASFAHRFKKDYGLSPG 284


>UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786
           str. D14 RepID=C6IWJ9_9BACL
          Length = 284

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 26/257 (10%)

Query: 45  YRVIWPRDKKKPLIA-----NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99
           Y   W +++  PL +          ++ +     I+   GE   L G       P  +  
Sbjct: 20  YLCYWGKERCAPLHSFGPGVRDIYKIHFIHSGRGIVKVEGETFELTGGQAFLAYPERVIF 79

Query: 100 YHCEGL-VWEQYWMEFTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAELIT 148
           Y  + +  W   W+ F    + +I          PV         ++Y + L E  E  T
Sbjct: 80  YQADEVDPWTYSWIGFNGEQVAEILSRTRLTPASPVLPMDTHLMPQLY-ELLNEAEESNT 138

Query: 149 SPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWSV 203
           + +     L   F+T ++     L+ A G  D  R Q     I + +  LH+   +  SV
Sbjct: 139 TRDLRLQTLLYEFMTLLVE----LVPASGDADSTRTQAKDAYIHRCLDFLHSHYSEEMSV 194

Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263
             +AA +     +L  LF R TG  P++Y L  R++ A +LL+    S+ EVA ++ + D
Sbjct: 195 GQLAAIVGLDRKYLSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQD 254

Query: 264 SFHFSKAFKHKFGYAPS 280
           +  FSK FK   G +PS
Sbjct: 255 ALLFSKMFKKTVGTSPS 271


>UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter
           fermentans DSM 18053 RepID=C6VZN4_DYAFD
          Length = 292

 Score = 70.1 bits (170), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 31/279 (11%)

Query: 26  VISSGISLISLWHTYADE----HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQ 81
           + ++G S +     Y +E     +++ W R +    I N +  ++  +G G    +N   
Sbjct: 22  LTTAGYSKVEPNQQYPNEPHPDSHKLTWNRGR----ILNDYYIIFITRGKGIFEAENLPP 77

Query: 82  ITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFT---------------PTSMMDIPVG 125
             +      FL P   H Y  +    WE+YW+ F                    +DI   
Sbjct: 78  TEVSAGQCFFLFPGVWHRYKPDVKSGWEEYWLGFNGYYIRQLMNNLNFHPARPFVDIKSN 137

Query: 126 QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ 185
           ++ ++    I+++   + A L    +     L +  +   I +     + D   DP  R 
Sbjct: 138 KEILVLLHRIFDR--LKAANLGYHQQIAGITLQILGILNTISK-----FKDYDNDPVGRL 190

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           I K    L  S +++  V ++A+ +P   +  R+ F + TG +P +Y+L+ RL  A  LL
Sbjct: 191 IAKAEFILQESYEKQVDVEELASQLPMGYSAFRKAFKKITGVSPNQYHLNLRLSRARDLL 250

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
                ++ E+     F   F+FSK FK K G +P A  +
Sbjct: 251 INTNLNISEITHQTGFESVFYFSKLFKKKNGLSPVAFRR 289


>UniRef50_Q0SVI3 DNA-binding response regulator, AraC family n=9 Tax=Clostridium
           perfringens RepID=Q0SVI3_CLOPS
          Length = 529

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 88/175 (50%), Gaps = 12/175 (6%)

Query: 112 MEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAEL------ITSPEAIKNNLAVAFLTKI 165
           M   P+++++       +I N E    +L ++ EL        + E + NN      + I
Sbjct: 349 MNVKPSNLINYVNFMCELIENHEYVQDDLNDIKELKGKILKSDNIEELINN------STI 402

Query: 166 IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225
           +  +I   Y   K+   +R++ ++I  +  ++ +R ++  +A  +  +E++L R+F   T
Sbjct: 403 LIDYINQRYIKSKELSYKREVNEIIKFIEKNIDKRITLVMVANAVNLNESYLSRIFKSET 462

Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           GK    +  + ++  A  LLKQQ   V EVA+++   D F+F++ FK  +G +PS
Sbjct: 463 GKNLMYFINEVKMKKAKELLKQQDTLVKEVANSIGMTDQFYFNRVFKKFYGVSPS 517


>UniRef50_B9KTR6 Transcriptional regulator, AraC family n=2 Tax=Rhodobacter
           sphaeroides RepID=B9KTR6_RHOSK
          Length = 306

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           QI KL     A   +  SVA+MA  +  SE+W  RLF   TG TP ++ L  R++LA +L
Sbjct: 192 QIRKLERAFRAGGGRGQSVAEMAQVVGLSESWFTRLFRDTTGVTPLQWQLRQRVELAQTL 251

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           L++   SV E+AD L F D  H ++ F+   G  P A
Sbjct: 252 LEEN-LSVAEIADRLGFSDQAHLTRVFRQVTGQPPGA 287


>UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 Tax=Pedobacter
           heparinus DSM 2366 RepID=C6XZD9_PEDHD
          Length = 294

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 24/247 (9%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWME 113
           K  I + +  +Y  +G G     + +Q+ ++   +I L P + H +  +    W++YW+ 
Sbjct: 50  KGRILDEYQLIYISKGTGIFESAHCKQLHINEGAVILLFPGEWHRFKPDPETGWDEYWVG 109

Query: 114 FTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163
           F    + +I          P+ Q  +       + +L ++   I      +       ++
Sbjct: 110 FKGDIISNIAKKNFISPHLPLLQVGL-------SDQLIDLFSAILEKTKTEQPGYQPLIS 162

Query: 164 KIIYQWICLMYADGK------KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
            +I   +  +YA  K      +D     I K    L  S+    ++  +A  +  S +W 
Sbjct: 163 GMILHLLGEVYAKTKLQALEKEDISEILINKARILLRESVHTNIAIEKLAEELHVSYSWF 222

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
           R+ F  +TG  P +Y L  +++ A +LL      + E+A  L F  SF+FS+ FK+K  Y
Sbjct: 223 RKAFKTFTGIAPHQYLLQLKIEKAKTLLSDSTKPIKEIAFELGFESSFYFSRIFKNKTSY 282

Query: 278 APSAVLK 284
           AP    K
Sbjct: 283 APDTYRK 289


>UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=Lactobacillus
           RepID=C2EDY7_9LACO
          Length = 284

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 11/233 (4%)

Query: 58  IANSWVAVYTVQGCGKILLKNGEQITL-HGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTP 116
           I  ++V  Y  +GCG         + L  G+C I  K +       E   WE  W+  + 
Sbjct: 46  IRENYVIHYIRKGCGTFSSAGRPVVELKQGDCFILPKGVPCFYQADEKDPWEYSWIGLSG 105

Query: 117 TSMMDIPVGQQ-------SVIYNGEIYNQELTEVAELITSPEAIKNNLAV-AFLTKIIYQ 168
               +I              I + E  N  L+ + E +     +KN+L   + L K+ + 
Sbjct: 106 IRTGEIFAASSISEKNYLCQIQDTEFKNS-LSRLYESLHLTHNMKNSLLTESLLYKMFHD 164

Query: 169 WICLMYAD-GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
            +    A+  +K   R Q    +  +  +     S+ D+   +  S ++L  LF ++ G 
Sbjct: 165 LLDEFPAEVTRKTNSRTQFRLAVEYMRDNYDTGCSILDVCRGLSVSRSYLYSLFKKFAGS 224

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           +P+++  + R++ A  LLK    S+  +AD++ + DSF FSKAF+   G +P+
Sbjct: 225 SPQKFLTEIRMEEAEHLLKDTDRSIQNIADSIGYGDSFTFSKAFRKSRGCSPT 277


>UniRef50_UPI0001C34C27 transcriptional regulator, AraC family protein n=1 Tax=Clostridium
           sp. M62/1 RepID=UPI0001C34C27
          Length = 262

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 18/249 (7%)

Query: 37  WHTY--ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94
           WH     D  +    P     P     W+  Y +QG G    +  E     G   + ++P
Sbjct: 12  WHDINPVDCGWEACAPGHSFGPAARFYWLLHYVIQGRGAFTAEGKESPVRAGQMFV-IRP 70

Query: 95  MDIHSYHCEGLV-WEQYWMEFTPTSMMDIPVGQQSVI---YNGEIYNQELTEVAELITSP 150
            ++  Y  +    WE  W+ FT    +   + Q++V+     G I++  L   AE  T  
Sbjct: 71  FEVTYYEADRREPWEYIWIGFTCGIPLPECLLQEAVVNASRCGSIFSSMLE--AENQTDG 128

Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210
             +       FL    +Q +  +  + K       +E+    L A+  +  S+ ++A  +
Sbjct: 129 REL-------FLCGKAFQLLAAL--EEKPAGGEDYVEQARTYLEANYMRDVSIGELAGKL 179

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             + ++   LF + TGK+P++Y  D R+  A  L+ + G S G+ A +  + D F FS+ 
Sbjct: 180 NLNRSYFSTLFRKKTGKSPQQYLTDYRMGRACQLMTEHGYSPGKAALSTGYPDIFSFSRM 239

Query: 271 FKHKFGYAP 279
           FK  FG  P
Sbjct: 240 FKKHFGVFP 248


>UniRef50_A6VZ04 Helix-turn-helix-domain containing protein AraC type n=1
           Tax=Marinomonas sp. MWYL1 RepID=A6VZ04_MARMS
          Length = 328

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 8/135 (5%)

Query: 153 IKNNLAVAFLTKIIYQWI-----CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMA 207
           I   LA      I+ +W+        + +  +DP+  Q+   ++ LH    ++WSVADMA
Sbjct: 189 ILTRLADVVAAAILRRWVEIGCNVCGWVEAMRDPKLAQV---LSALHHEPGRQWSVADMA 245

Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267
           + +  S +     F   T  TP++Y  + R+ LA   + Q   S+ E+AD L +  +  F
Sbjct: 246 SEMGVSRSVFAERFTELTHSTPQQYLGNLRMRLASQWISQDNLSLDEIADRLGYGSAASF 305

Query: 268 SKAFKHKFGYAPSAV 282
           S+AFK   G +P AV
Sbjct: 306 SRAFKRMTGISPGAV 320


>UniRef50_D1N947 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N947_9BACT
          Length = 303

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 14/220 (6%)

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFT-PTSMMDIP 123
           + + G G+  ++NG +  L     + + P D + Y   + L + +  + F  P + M   
Sbjct: 65  HLISGGGRGWIENGRETDLTPGQAVVIAPGDRNRYGGSDTLPYVEDAVRFCGPAADM--- 121

Query: 124 VGQQSVIYNGEIYN----QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179
           +    VI +G IYN    + L  + EL   P A     A   L K++      +Y + ++
Sbjct: 122 MRNAGVISSG-IYNLGGVRRLLPLIELAQDPSADAQINANIALQKLLVD----LYNEHRR 176

Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239
                 +E+L+A + +     W+V ++A     S   LRR FLR+TG  PK Y  + +L 
Sbjct: 177 RNTLTPMEELVAEIKSRPDHWWTVEELAEFCNLSTDQLRRNFLRHTGMRPKRYLEELKLR 236

Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            A  LL      +  VA    + D +HFS+ FK+  G +P
Sbjct: 237 QAAELLVSSPLPIAVVAAKFGYADPYHFSRRFKNLTGVSP 276


>UniRef50_C6D7G4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D7G4_PAESJ
          Length = 522

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 22/239 (9%)

Query: 58  IANSWVA----VYTVQGCGKILLKNGEQITL-HGNCIIFLKPMDIHSYHCEGLVWEQYWM 112
           + +SW++    ++ V G    L  NG +  L  G C++F   + +   H    V     +
Sbjct: 21  VHSSWMSAGYTLFAVTGGKGKLWANGREYVLSRGKCLVFGPGITLRLTHLPSSVLTVQEL 80

Query: 113 EFTPTSM----------MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFL 162
            F   S+          +++P G+   +  G     E  E+A ++      K  LA    
Sbjct: 81  VFDCVSLTQAAPENIPALELPEGE---LLPGSFIRIE--ELAGMLFDNRGDKQGLAAYGN 135

Query: 163 TKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQR--WSVADMAATIPCSEAWLRRL 220
                + I L+ ++G+   +R  +  +  T+    Q+   +++ ++A     S     R+
Sbjct: 136 HARFQELIYLVLSEGQAGEERASLAAVERTIELVQQKAAGFTLQELADETGLSARQYSRI 195

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           F + TG++P +Y ++ R++ A SLL   G S+ +VA    F D FHFS++FK   G +P
Sbjct: 196 FRQLTGQSPIDYQIERRMEHAKSLLTDSGQSIHQVAHEAGFRDPFHFSRSFKRHTGVSP 254


>UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0Z4P0_BREBN
          Length = 515

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 12/237 (5%)

Query: 60  NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM 119
           N+ V  Y  +G  ++ +   +Q+   G  ++      I    C+      Y + +     
Sbjct: 20  NTHVLCYVAEGRAEMTVDGQKQVLDAGKLLLLHPTTKIEELRCQSGPLHIYRLHYAEARR 79

Query: 120 MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI----KNNLAVAFLTK--IIYQWICLM 173
                  +S     E+    ++  A  +T  E +    +     +FL    ++Y+ + ++
Sbjct: 80  DQ----HESAPERKEVEALAVSTPASFLTVLEELSQLTRKRDYSSFLRSQALLYELLGVV 135

Query: 174 YADGKKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
           Y + KK  ++    IE+ IA +    ++   +  + +    + +   R F R TG TP E
Sbjct: 136 YDEQKKKEEKGIGTIEETIAYMQKHYRESLELGSLPSLAGLTPSSYCRAFKRVTGMTPGE 195

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           Y    R++ A  LL   G SV +VA  + + D  +FS+ FK + G +P   +K +DQ
Sbjct: 196 YLTGLRMEHAKELLAHSGGSVKDVARNVGYTDELYFSRLFKKREGLSPQIYMKQSDQ 252


>UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=Lactococcus lactis
           subsp. lactis KF147 RepID=A9QSR3_LACLK
          Length = 289

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 15/237 (6%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLV-WEQYWME 113
           P I  ++V  Y   G G+ ++   E     G+C  F+ P D+ + Y  + L  W  YW+ 
Sbjct: 31  PAIRENYVIHYITSGSGRYMIYGFEHQLKAGDC--FIIPADVETFYQSDALTPWAYYWLG 88

Query: 114 FTPTSMMDIPVGQQSVIYNGEI--------YNQELTEVAELITSPEAIKNNLAVAFLTKI 165
            +   + D+   + ++   G I        + +  +++  LI+  +   +      L  +
Sbjct: 89  LSGHVVNDL-FARTALDDKGWILENVSKTEFIEHFSKIQNLISDDDKTVDLDIQVELFAL 147

Query: 166 IYQWICLM--YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
           +   I L        K+      EK    ++ +  Q   + D+ A +  S A+L  +F  
Sbjct: 148 MKSLITLFPKSITEHKNQSDYYAEKAYTFINQNYSQSIKIKDVLAHVMISRAYLFTIFKH 207

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
             G +P++Y +D R+  A  LL    N V ++++ + F DS  FS AFK ++G +P+
Sbjct: 208 KYGLSPQKYLIDLRMAKAAMLLIHSDNLVSQISEAVGFSDSLSFSSAFKKRYGVSPT 264


>UniRef50_A3TV05 Putative transcriptional regulator n=1 Tax=Oceanicola batsensis
           HTCC2597 RepID=A3TV05_9RHOB
          Length = 291

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%)

Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
            DG       Q+ K+     A   +R S A MA  +  SE+W  ++F   TG TP ++ L
Sbjct: 177 GDGNARLTAGQMRKVAMRFDAGGGRRLSTAQMADAVNLSESWFSQVFKNTTGMTPHQWQL 236

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           + R+D A  LL     SV ++AD L F D  H +++F+   G  P++  +N
Sbjct: 237 NKRVDQAQELLSGTDLSVADIADRLGFSDQAHLTRSFRQIVGETPASWRRN 287


>UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales
           RepID=C7H3E2_9FIRM
          Length = 306

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 23/257 (8%)

Query: 51  RDKKKPLIANSWVA-------VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI--HSYH 101
           R KK+P +   W         +Y   G         E++   G+ +++ +P +I  + Y+
Sbjct: 50  RLKKRPKLPTFWAKGRRDYQILYVASGKAHFWFDGVEEVVTSGHMVLY-QPKEIQKYVYY 108

Query: 102 CEGLVWEQYWMEFTPTSMMDI------PVGQQSVIYNGEI--YNQELTEVAELITSPEAI 153
            E    E +W+ FT   + +I      P+ +  V Y+G +  Y     ++   +   E  
Sbjct: 109 VEDHP-EVFWIHFTGYDVKNILNYHGIPLDKH-VFYSGTLPDYKMLFRKIIRELQQCEYG 166

Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIP 211
             +  +A L  II   +     + +K       +IE  +A  + +   + SV D A ++ 
Sbjct: 167 YEDY-IASLFNIILFLVSRQQQESEKTTTSIPEEIEAAVAYFNENYNTKVSVDDYAESLH 225

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
            S  W  R F +Y   +P +Y L  R+  A SLL+    ++GE+A+ + + +  +FS+ F
Sbjct: 226 ISTNWFIRNFKQYMKISPAQYILSLRMVNAQSLLENTEYNIGEIAEIVGYDNPLYFSRVF 285

Query: 272 KHKFGYAPSAVLKNTDQ 288
           K ++G +P+   KN ++
Sbjct: 286 KKEYGVSPAQYRKNLEE 302


>UniRef50_C4DTW1 Transcriptional regulator containing an amidase domain and an
           AraC-type DNA-binding HTH domain n=1 Tax=Stackebrandtia
           nassauensis DSM 44728 RepID=C4DTW1_9ACTO
          Length = 431

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 13/218 (5%)

Query: 70  GCGKILLKNGEQITLHGNCIIFL---KPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQ 126
           G G++ L +       G C +F     P+  H      LV   + M FT T      V +
Sbjct: 18  GAGELRLDDRHVRLRPGFCAVFAPGDAPVATHDPRHPLLV---FGMHFTATGFDGDLVPE 74

Query: 127 QSVIYNGEIYNQELT-EVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK---DPQ 182
           Q       +++QE    +A          ++L        + Q++CL++ +  +    P 
Sbjct: 75  QRWC---RLWDQEFAVRLARHCDYAHRRGDDLGQRQAVLGLEQFLCLLWDNVTRPAPGPG 131

Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242
              +E +   +     + W+VA +A     S A   R F  +TG +P  Y + ARLD A 
Sbjct: 132 DAAVEDIARAVRQEPSRDWTVATLAKRANLSRAQFTRRFTAHTGYSPARYVIRARLDRAR 191

Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            LL +   SVG+VA TL + D  +FS+ +K   G +PS
Sbjct: 192 QLLTETNMSVGQVAATLGYPDVGYFSRQYKVHTGSSPS 229


>UniRef50_B0KFJ0 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria
           RepID=B0KFJ0_PSEPG
          Length = 361

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 14/122 (11%)

Query: 173 MYADGKKDPQRRQIEKLIATLHAS--------------LQQRWSVADMAATIPCSEAWLR 218
           M  +  ++PQ +Q E     LHA               L++  S   +A  +  S   L 
Sbjct: 215 MLIEQVREPQVQQAEGYRRNLHAQAGKMGRAIELMEQHLEEPLSCEAIAERVALSRRQLE 274

Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278
           R F+++TG TP +YYL  RL  A +LL+Q   SV +VA +  F    HFS+A++ KFG A
Sbjct: 275 RQFMQHTGLTPLKYYLSLRLARAHNLLQQTRMSVAQVAASAGFGSLEHFSRAYRAKFGCA 334

Query: 279 PS 280
           PS
Sbjct: 335 PS 336


>UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CVH4_PAESJ
          Length = 287

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 33/277 (11%)

Query: 42  DEHYRVIW-------PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94
           +EH  V++       P  ++ P + + ++    ++G G+     G+   L       ++P
Sbjct: 17  NEHMNVLFAGESQTKPSHQRGPKVYDFYLMHTVLEGKGEFTC-GGKSYPLQAGDTFLIEP 75

Query: 95  MDIHSYHCEG-LVWEQYWMEFTPTSMMDI----------PVGQQSVIYN-GEIYNQELTE 142
             + SY       W   W+ F      ++          PV + + I   G +YN   + 
Sbjct: 76  EALVSYISNADEPWLYRWVAFNGPQAAELAQAAGFSVANPVAETAAIRRVGVLYNHIFSI 135

Query: 143 VAELITSPEAIKNNLAVAFLTKIIYQWICLMY-------ADGKKDPQRRQIEKLIATLHA 195
             +    P A   +L  A   +++    C ++       A    D   + I+++I  L  
Sbjct: 136 FRK--NDPAA---HLKAAGYLQLLLAEFCTVHKLSEDNAAMTNMDDTDKLIQQMIHYLST 190

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ-QGNSVGE 254
              Q  S+  MA +   + A+L R+F RYTG++P  + L  R+D A  ++++ +G ++ +
Sbjct: 191 QYAQPVSIEQMAESFGYNRAYLSRVFKRYTGESPITFLLKLRIDKARQMIREREGLTIEQ 250

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPT 291
           +A ++   DS +FSK F+  +G +PSA  ++  Q  T
Sbjct: 251 IAASVGLQDSLYFSKQFRRFYGLSPSAYRESMRQMKT 287


>UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabacteroides
           RepID=A7AB39_9PORP
          Length = 306

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 126/289 (43%), Gaps = 14/289 (4%)

Query: 18  IPLLINENVISSGISLISLWH-----TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72
           +P   +EN+    IS I         +Y  + + + +  +  +  I + +  VY V+G G
Sbjct: 14  LPTNNDENIWGMSISGIGFQSIDPKGSYPLKGHPIGYTFNPDRGRIIDEFALVYIVKGEG 73

Query: 73  KILLKNGEQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFTPT---SMMDIPVGQQS 128
                N  +  +      F+ P   HSY     + W++Y++ F       +++  + + +
Sbjct: 74  TFASINCFEKKISKGDAFFIFPGQWHSYQPIANIGWDEYYVTFQGDYFEKLLNGIINRAN 133

Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP----QRR 184
            I++  + +Q +    E++    A K+    A L  I    I L+Y+  K         +
Sbjct: 134 PIFHIGMNDQIVKHFGEMLDCARAQKSGFQ-AVLAGITMHTIGLIYSINKNQDYGSVSMQ 192

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           +I++    +  ++  +++  D+A +I  S +  R+ F +YTG  P +Y L  +L     L
Sbjct: 193 KIQEACVLMRENIYDKFTPEDIAESINMSYSNFRKSFKQYTGIAPHQYMLQLKLSKIKDL 252

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDA 293
           L     S+ ++A  LNF  + +FS  F+ K G  P +  K  ++    A
Sbjct: 253 LSSTEMSIQDIAMKLNFESADYFSYFFRSKTGINPLSYRKEIEKQREKA 301


>UniRef50_C7MF03 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Brachybacterium faecium DSM 4810 RepID=C7MF03_BRAFD
          Length = 311

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 7/194 (3%)

Query: 90  IFLKPMDIHSYHCEGLVWEQYWMEF----TPTSMMDIPVGQQSVIYNGEIYNQELTEVAE 145
           I+L+P   HSY  +   W ++W+ F      T      VG   V+  G     E  E+  
Sbjct: 104 IWLEPGTPHSYGPDAHGWTEHWVLFEGVGARTYRSHSGVGDGHVLRRGGPEPAERAEIFA 163

Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVAD 205
            +    ++    A    + ++++ +  +  D ++DPQR  +     T+ A+  +  SVA 
Sbjct: 164 ALHRAGSVPGRRAQLHASSLVHRLLGALLGDAEEDPQRTSVTH---TVLATATEDLSVAQ 220

Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265
            AA         R    R TG TP E+ L  R   A  LL +    + +VA  +   D+ 
Sbjct: 221 RAALSGVGVDEFRAQIRRATGLTPHEFVLTTRFSRAQELLARSDLPIWQVAAEVGIDDAS 280

Query: 266 HFSKAFKHKFGYAP 279
           +F++ F  + G AP
Sbjct: 281 YFTRLFTRRIGVAP 294


>UniRef50_A4BIK9 AraC-type DNA-binding domain-containing protein n=1 Tax=Reinekea
           blandensis MED297 RepID=A4BIK9_9GAMM
          Length = 271

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 22/225 (9%)

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTS-----M 119
           ++T  G G I  ++GEQ    G+  + +       +  EG  W+  W    P       M
Sbjct: 50  LFTSSGTGHITTEHGEQAIEPGSMTV-IPAHTPARFEIEGDRWDMCWFLLLPAMHWNQWM 108

Query: 120 MDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
            D+    P GQ   +++          +  +I     +  +   A   K+       + A
Sbjct: 109 PDVAEVRPTGQAPAVFH----------LCHVIDQERYLDASYPKASFQKLASYIELNLKA 158

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
           +  + P R  +    A +  SL + W+V  +A     SE    RL     GK+PK+    
Sbjct: 159 NQPETPDR--LSAAFAQVEQSLHKPWTVGQVANLCYYSEPHFYRLCQERFGKSPKQIIRQ 216

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            R+D A  LL+Q    + E+A  L F D F+FS  FK + G +PS
Sbjct: 217 LRMDRARQLLEQTDWPLAELAGRLGFSDQFNFSNRFKRETGLSPS 261


>UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10
           Tax=Rhizobium/Agrobacterium group RepID=B5ZUS0_RHILW
          Length = 274

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 11/235 (4%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYW 111
           D+K P    S+  V   +G G +      +++L G  + +L P   HSY  +   W++ W
Sbjct: 34  DRKLP----SFAVVLVERGQGWLETAASGRLSLTGPALFWLFPNRAHSYSPDEDGWDERW 89

Query: 112 MEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEA-------IKNNLAVAFLTK 164
             F  +   D    +     +  +    L +VA L  +  A       +    A   L +
Sbjct: 90  ALFEGSFTRDFVRLRIIAERHPVVALHRLDDVARLFGTLHADLLDDTHLGQASAALMLHR 149

Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           I+           ++  +R  +  ++ TL     Q   +A  AA    S A LRR F   
Sbjct: 150 IVISAARQAIGAAERRQERPDMAVIVETLRRRAMQPLDLAAFAAEHQMSPATLRRRFTLE 209

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           TG  PK + L AR+D A  LL      +  VA  +   D F+FS+ F  + G +P
Sbjct: 210 TGLPPKAFQLRARMDHAKQLLATTDEKIEAVAAMIGLEDPFYFSRVFHEREGCSP 264


>UniRef50_A0L3B8 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria
           RepID=A0L3B8_SHESA
          Length = 311

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 7/141 (4%)

Query: 155 NNLAVAFLTKIIY-QWICL-MYADGK-----KDPQRRQIEKLIATLHASLQQRWSVADMA 207
           +N  V  LT+II+ Q + + MY   K     K  +  Q+ K +  +H SL ++W + D+A
Sbjct: 169 SNTLVRKLTEIIFVQALRIHMYKSNKNAGFFKLIENPQLSKTLEAIHHSLDKKWGLDDLA 228

Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267
                S       F   +G TP +Y    RL+ A  LLK+ G SV EV++ + +    HF
Sbjct: 229 GIAGMSRTNYSVKFKELSGMTPLDYLTYCRLEKAKQLLKESGKSVPEVSEAIGYPAHEHF 288

Query: 268 SKAFKHKFGYAPSAVLKNTDQ 288
            K FK K G  PSA  K   +
Sbjct: 289 QKLFKKKIGKTPSAYRKENSE 309


>UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bacteroides fragilis 3_1_12
           RepID=UPI0001B4A5A3
          Length = 302

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 29/197 (14%)

Query: 107 WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQ--ELTE-----VAELITSPEAIKNNLAV 159
           W  YW+ FT         G++S ++N   YN+  ++ E     + + +   E I  NL +
Sbjct: 112 WSIYWLHFT---------GEKSHLFNS-FYNKLHKIDESPNARIKDRMQLFEEIYQNLEM 161

Query: 160 AF-LTKIIYQWICLMY--ADGKKDPQRRQI---------EKLIATLHASLQQRWSVADMA 207
            + +  + Y  +CL +  A  K   Q R+I         ++ I+ +  +++++ S+ D+A
Sbjct: 162 GYSIENLEYTTLCLWHFIASFKFVSQFREINRAKQGDVTQEAISYMRKNIEKKLSLDDIA 221

Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267
            ++  S +   ++FL+ +G TP  Y+   ++  A  LL      + E+A+ L F+D +HF
Sbjct: 222 GSVNYSSSHFGQVFLKKSGYTPLNYFNQLKIQKACQLLDFSDLKIKEIAEQLGFYDQYHF 281

Query: 268 SKAFKHKFGYAPSAVLK 284
           SK F  + G  PS+  K
Sbjct: 282 SKVFYKQIGETPSSYKK 298


>UniRef50_B9K0A2 Transcriptional regulator AraC family n=18 Tax=Rhizobiales
           RepID=B9K0A2_AGRVS
          Length = 314

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 22/232 (9%)

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121
           V  +T+ G G +  +N       G  ++ L P + H Y  E G  WE +W+       + 
Sbjct: 59  VLQHTISGAGNLRYENSTYRVTPGQTLLVLVPHN-HRYWLEPGGRWEFFWISMNGEEALR 117

Query: 122 I---------PV---GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169
           I         P+    QQ+V +  +   + +   AE      AI    A+A    +    
Sbjct: 118 IHNAILTAMGPIFNLNQQTVEHLADCSQRLIAGGAETPGRASAIAYEAAMALYDDVFGSH 177

Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229
             L         + R ++ +I  + A+L Q  SV  +AA    S A   R+F    G  P
Sbjct: 178 PTL-------SAEYRTMQHVIDHISANLDQSLSVEQLAAVSGLSRAHFSRVFAASEGMPP 230

Query: 230 KEYYLDARLDLALSLLKQQGN-SVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            E+ L  RL  A+ LL +  + SV E++    F +  +FSK F+  FG +P+
Sbjct: 231 AEFVLHKRLKRAVKLLTKGSHLSVKEISTMCGFEEPNYFSKVFRRHFGASPT 282


>UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D1W6_PAESJ
          Length = 264

 Score = 66.6 bits (161), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 116/261 (44%), Gaps = 19/261 (7%)

Query: 38  HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97
           H   +E Y ++ P  ++       W+ VYT++G G      GE+I   G  ++  K +  
Sbjct: 13  HFLENESYCMVRPAGRE------DWLLVYTLEGEGFFRTPAGEKICKAGELVLLRKRVP- 65

Query: 98  HSYH-CEGLVWEQYWMEFTPTSMMDIPVGQQSVIY---NGEIYNQELTEVAELITSPEAI 153
           H+Y   +G  W   W+ F     + +   ++ ++    + E+  + +     L+    A 
Sbjct: 66  HTYGTVKGDTWNFLWVHFNRLPELSLLPDEEVLLCPLPSSELQRRVIRIFRSLLHDSRAQ 125

Query: 154 KN---NLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210
                 L    L+ +I     L+ A    D    ++ +++  L A +Q+  S+ ++AA +
Sbjct: 126 GGFWEELCDNQLSALI-----LLMAGQLADKLDYRVSQVMRILSAQMQEPLSINELAARV 180

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             S + L  LF   TG++  +   + RL+ A+ L+ Q G + GE +  + F    HF+  
Sbjct: 181 GLSASRLSHLFKSETGRSIVDTLNNMRLEQAVLLMLQAGRTAGEASFDVGFQSYNHFAAL 240

Query: 271 FKHKFGYAPSAVLKNTDQHPT 291
           F+ ++G  P+   + T+   T
Sbjct: 241 FRRRYGCGPAEYKRKTESTST 261


>UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 Tax=Faecalibacterium
           prausnitzii RepID=C7H973_9FIRM
          Length = 271

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 3/157 (1%)

Query: 125 GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD--PQ 182
           G Q+ +Y    ++  L  +  ++ S E+   +  + +LT I++ ++       K+D  P+
Sbjct: 107 GAQTALYGPVQWSGRLRTLLGMMQSAESEPESPGMIYLTLILH-YVEQECRSEKQDIRPR 165

Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242
              +E++ A L A+ QQ++S+ D+AA    S  +L RLF R TG++  +Y    R++ A 
Sbjct: 166 NETVEQICAYLAANYQQKFSLTDVAARFYLSPYYLSRLFRRVTGQSIVDYINGRRIEAAQ 225

Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            LL+    ++  VA+   F  + HF + F+   G  P
Sbjct: 226 RLLESTDLNISAVAEQTGFASAAHFRRVFRETMGTGP 262


>UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides RepID=A6KXZ8_BACV8
          Length = 306

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 20/279 (7%)

Query: 20  LLINE-------NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72
           L++NE       +V + G   I     Y   ++   +    +K  + + +  VY  +G G
Sbjct: 13  LIVNERDKRFGLSVTTVGFQAIRAGSVYPPRNHPDAYYFTAQKGRVLHEYQLVYITKGRG 72

Query: 73  KILLKNGEQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFTPTSMMDIP----VGQQ 127
                    + +    I+FL P   H+Y   +   W +Y++ F    + ++     + ++
Sbjct: 73  TFASDTTPSVDISKGQILFLFPGQWHTYAPLQKTGWNEYYIGFEGPIIDNLVKNSFISKE 132

Query: 128 SVIYNGEIYNQELTEV-AELITSPEAIKNNLAVAFLTKIIYQWI--CLMYADGKK---DP 181
           S I +  I N+EL  + A  +   EA K   A  +L+ I+   +   L  +  K+   D 
Sbjct: 133 SQILDIGI-NEELASLFARALEVAEADKT-AAQQYLSGIVLHIMGAVLAISQNKRYEVDN 190

Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241
             ++IE     +H ++ +     ++A  +  S +W R++F  YTG  P +Y+ + +L  A
Sbjct: 191 AAQKIESAKIIMHENVYKDIDPEELAMKLGISYSWFRKVFKEYTGYAPAKYFQELKLRKA 250

Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
             LL +   SV E+   LN+  + HF   FK +  + P+
Sbjct: 251 KQLLIESSMSVKEICYELNYTSTEHFFSVFKKRTNFTPT 289


>UniRef50_A0Z695 Transcriptional regulator, AraC family protein n=1 Tax=marine gamma
           proteobacterium HTCC2080 RepID=A0Z695_9GAMM
          Length = 338

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 54/95 (56%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           ++++++  + A+L++  S+ ++A  +  S   L RLFL+Y   TP  YYL  RLD A  L
Sbjct: 223 KLKEVLQLMEANLEEPISLQELADFVQLSRRQLERLFLKYLHCTPSRYYLKLRLDRARRL 282

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           +KQ   S+ E+     F  + HFS+ ++   G +P
Sbjct: 283 VKQSTRSIVEITSMCGFVSTTHFSRCYRKYIGVSP 317


>UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n=2 Tax=Bacteria
           RepID=B5JKR3_9BACT
          Length = 301

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 20/257 (7%)

Query: 51  RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQ 109
           RD+  P    + + +Y + G G   L   ++I +     I +     H+Y   EG  W  
Sbjct: 51  RDQGCP----NHILIYCIGGQGWYSLNGEKRIPVQAGQAILIPAKSPHAYGSTEGQSWRL 106

Query: 110 YWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPE-AIK-----NNLAVAFLT 163
           YW+ F+ T    +         N  IY   L   A +IT+ E AI+     ++ +V    
Sbjct: 107 YWIHFSGTEADGLFNFLSDERTNALIY---LPHHASIITAFEDAIRWTQREHSKSVLHAF 163

Query: 164 KIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
                 +  + A+GK+    R      ++   I  +  +L+   S+  +A+    S    
Sbjct: 164 AGSCSRLLGIIAEGKRPNSSRARFVEERVRSTITRMRETLRSPLSLEQLASEACLSVPHY 223

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
             LF + T  +P + Y   R+ LA  LL      + EVA+T  + D+++FS+AFK   G 
Sbjct: 224 SALFKKQTSSSPIQMYSQMRIQLACELLHNTDLGIKEVAETAGYEDAYYFSRAFKKVMGC 283

Query: 278 APSAVLKNTDQHPTDAS 294
            PSA   + D+   D S
Sbjct: 284 PPSAYRNSLDKRQRDPS 300


>UniRef50_A9WHL1 Helix-turn-helix-domain containing protein AraC type n=2
           Tax=Chloroflexus RepID=A9WHL1_CHLAA
          Length = 329

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGK------KDPQRRQIEKLIATLHASLQQRWSVA 204
           E +   LA     +I+  W+ +    G        DP    I K +A +HA  QQ W VA
Sbjct: 161 EVVLRRLADILFVQIVQYWVEMHGTQGSGWLGAFHDPL---IGKALALMHAHPQQDWQVA 217

Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN-SVGEVADTLNFFD 263
            +A  + CS +     F    G+ P EY    R+ +A  LL +  +  VGEVA  + +  
Sbjct: 218 SLARALACSRSTFAARFTALVGEPPMEYLTRWRMQIASRLLIEDPSLRVGEVAARVGYRS 277

Query: 264 SFHFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294
              FSKAFK   G AP+A  ++   H  +A+
Sbjct: 278 EAAFSKAFKRLIGIAPTAY-RSAAGHRVEAT 307


>UniRef50_C9D180 Helix-turn-helix-domain containing protein, AraC type n=1
           Tax=Silicibacter sp. TrichCH4B RepID=C9D180_9RHOB
          Length = 299

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           Q+ KL         QR S+A+MA  +  SE+W   +F   TG TP  +  D R+  A  L
Sbjct: 192 QMRKLERGFDQRGGQRMSIAEMAQLVGLSESWFSHVFKSTTGMTPVRWQKDRRIGNAQML 251

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           L++   SV EVA  L F D  HF+K F+   G+ P++
Sbjct: 252 LRESDLSVAEVAARLGFSDQSHFTKVFRDVVGHTPAS 288


>UniRef50_Q3M1N4 Transcriptional Regulator, AraC family n=1 Tax=Anabaena variabilis
           ATCC 29413 RepID=Q3M1N4_ANAVT
          Length = 299

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 58/101 (57%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           Q++K+I  ++ +L+Q  ++A++AA +  S ++   LF   TG  P +Y +  R+D A  L
Sbjct: 198 QLQKVIDFINQNLEQDLALAELAAIVQMSPSYFSTLFKHSTGLAPHQYVIQCRVDRAKQL 257

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           L+Q   ++ E+A +L F    H S+ FK   G +P   +K+
Sbjct: 258 LRQSNLTIAEIAYSLGFTHQSHLSRHFKRLVGVSPKVFIKS 298


>UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Tax=Bacteroides
           cellulosilyticus DSM 14838 RepID=UPI0001969580
          Length = 304

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 17/239 (7%)

Query: 54  KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWM 112
           +K  I N +  +Y + G G  +  N +++ +H   +I L P + HSY  +    W +YW+
Sbjct: 51  EKGRILNEYQLIYILDGKGTFVSMNKKKMQIHSGHMILLFPGEWHSYKPDKETGWYEYWI 110

Query: 113 EFTPTSMMDIPVGQQSVIYNGEIYNQELTE-VAELITSPEAIKNNLAVAF---LTKIIYQ 168
            F    +  + V       +  I+N  L E V +L      +       F   L  I++ 
Sbjct: 111 GFNGQDIEKL-VEVDFFRKDNPIFNIGLNENVIQLYKQAANVAQEQTTGFQQILAGIVHL 169

Query: 169 WICLMYADGKKDP--------QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
            +   Y++ K++         Q    + LIA    + +   +  D+A  I  S +  R++
Sbjct: 170 LLGYTYSEHKQNSFINMNVLDQINTAKHLIA---ENYKTEITPKDIATKINMSYSCFRKV 226

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           F +YTG +P  Y  + RL  +  LL     +  E+A  + F   ++F   FK + GY+P
Sbjct: 227 FKQYTGFSPSRYKEELRLQTSKELLANTTMTSQEIAFEVGFDTPYYFCILFKKRTGYSP 285


>UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales
           RepID=C4ZBY6_EUBR3
          Length = 280

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 20/247 (8%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNC------IIFLKPMDIHSYHCE 103
           P     P   N ++  Y + G G ++  N + IT   N       +IF  P  I++Y  +
Sbjct: 29  PGHSFGPATRNHYLFHYVLSGTGTLMADNAKGITQTYNIKSGQGFLIF--PGQINTYIAD 86

Query: 104 G-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAE-LITSPEAIKNNLAVAF 161
             L WE  W+EF    + +  +    +  N  +Y+    ++ E L+     I  + + + 
Sbjct: 87  DKLPWEYIWIEFDGLRVKE-ALTTTELTKNNPVYHTHSKDIREKLVEEMLYITRHPSESP 145

Query: 162 LTKIIYQWICLMY-----ADGKKDPQRRQ----IEKLIATLHASLQQRWSVADMAATIPC 212
              I + ++ L Y        K  P  +     I++ +  +  + Q   S+ D+A     
Sbjct: 146 YHLIGHMYLFLDYLMQSAKSSKLVPGGKMSDFYIKEAMNYIEQNFQNDISIEDIAGVCGI 205

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           + ++L ++F    G +P+E+ ++ R+  A  LLK    S+ +V   + + +  HFS+AFK
Sbjct: 206 NRSYLGKIFKNSVGHSPQEFLMNYRMIKATELLKLTSLSIADVGSAVGYENQLHFSRAFK 265

Query: 273 HKFGYAP 279
           + +G AP
Sbjct: 266 NIYGVAP 272


>UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon transcriptional
           regulator, putative n=29 Tax=Firmicutes
           RepID=A3CML2_STRSV
          Length = 290

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 18/247 (7%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEF 114
           P I +++V  Y  +G G+   K G+ + L    +  LKP ++  Y  +    W  YW+  
Sbjct: 46  PAIRDTYVLHYITKGKGQFHYK-GKIVDLKAGDLFLLKPNELTFYQADKEEPWSYYWLGM 104

Query: 115 TPTSMMDIPVGQQ-----SVIYNGEIYNQELTEVAE-LITSPEAIKNN-LAVAFLTKIIY 167
           T   + D     Q      ++ N E     + ++ E L+   E  K+N LA   +   +Y
Sbjct: 105 TGGRVYDYFNHSQIAEDCYLLANQERKTDRIGKIVENLVYFAEQTKSNQLAQLHIMGQLY 164

Query: 168 QWICLMYADGKKDPQRRQI---EKLIATLHASLQQRW-----SVADMAATIPCSEAWLRR 219
           + I  + +   K PQ   +   ++L       +  ++     S+ DMA  +    ++L  
Sbjct: 165 ELIFHLGSVAYK-PQANTLSASQQLYLACKQIIDTQYPNPNLSIQDMAIKLSVHRSYLTT 223

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           +F      +PKEY    R+  A  LLK     V  +A ++ F D  +FSKAFK  FG++P
Sbjct: 224 IFKEEHQSSPKEYLEYVRMHRAKQLLKSTREPVQFIAYSVGFSDPLYFSKAFKKYFGFSP 283

Query: 280 SAVLKNT 286
           S+  + +
Sbjct: 284 SSFREQS 290


>UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CS68_PAESJ
          Length = 288

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 7/239 (2%)

Query: 54  KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWM 112
           ++  +   W  VY   G G   + +GE   +    +   +P   + Y  + G  W++Y+ 
Sbjct: 46  RQGAVFQYWAIVYIAGGSGTYRVDHGEAQRVTAGSLFLFQPGFHYDYGPDPGGYWDEYYF 105

Query: 113 EFTPTSMMDI----PVGQQSVIYNGEIYNQE--LTEVAELITSPEAIKNNLAVAFLTKII 166
               T   +     P+   +V++ GE  + +  +  +  L+ S      + A   L  ++
Sbjct: 106 TIEGTRYREWLEHWPILPNTVMHPGEDASSQNRIDRIFALMDSGTPADADRAALTLESLL 165

Query: 167 YQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226
           Y W+    +      +  ++ +L+  L  +L + +  A  A     + + LRR    YTG
Sbjct: 166 YDWVQSCQSSPAAQGKTARLAQLLEALSGTLHEPFDAAAFAERHHWALSTLRRTVSEYTG 225

Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
               EY    ++  A + L     +V E+A  L + D F+FS+ FK   G AP    +N
Sbjct: 226 FALHEYVHRLKMAEAKNRLLNTEQTVKEIAAALGYGDVFYFSRLFKKITGEAPRLFRRN 284


>UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae
           RepID=D1PMJ1_9FIRM
          Length = 285

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 24/249 (9%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEF 114
           P + + ++    V G G +    G   TL    +   KP  + +Y   E   WE YW+ F
Sbjct: 37  PGVRDHYLIHLVVAGKG-VYQVGGVSHTLQEGDLFLAKPNQLITYAADETDPWEYYWVGF 95

Query: 115 -----------TPTSMMDIPVGQ----QSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159
                      TP S +  PV      Q+V     +YN  L+   E     EA+      
Sbjct: 96  NGACANKLVQQTPFSDLH-PVHHCKDPQAV--REALYNIYLSRGPE--PQCEALMTGYLY 150

Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
            F+  ++ +    M   G    Q   +   I  +  +     SV D+A  +  S + L R
Sbjct: 151 IFMAHLMKEARDAMPNVGSSSSQY--VLSAIKYIQFNYSHDISVDDIAKAVGVSRSHLYR 208

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           +F+   G++P +Y  + R+  A SLLK    S+ E+A ++ FFD F+FS+ FK   G  P
Sbjct: 209 VFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPP 268

Query: 280 SAVLKNTDQ 288
           S  L   ++
Sbjct: 269 SKYLATLEK 277


>UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella oris F0302
           RepID=D1QQ68_9BACT
          Length = 291

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 23/263 (8%)

Query: 38  HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97
           H +AD +Y  +     ++  I N +  +Y   G G     + E+  +       L P + 
Sbjct: 37  HGHADGYYFKV-----ERGRILNEYQLLYITAGEGVFKSSSVEERRIKAGDFFLLFPGEW 91

Query: 98  HSYH-CEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN-------QELTEVAELITS 149
           H+YH  + + W+ YW+ F   +M D  V    +     +Y+       ++L   A     
Sbjct: 92  HTYHPSKNIGWQSYWIGFKGENM-DARVKNGFLSPTKPVYHVGYMDRLEDLYHYALDTAQ 150

Query: 150 PEAIKNNLAVAFLTKIIYQWICLMYAD------GKKDPQRRQIEKLIATLHASLQQRWSV 203
            EA+     +A +  ++   I +MY+       GK       + +    +  +L++  ++
Sbjct: 151 EEAVHTQRTLAGVVNLL---IGMMYSLERNIELGKNQEHVNMVNRARKRIREALEENLTI 207

Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263
             +A  +  S +  R+LF  +TG +P  Y  + RL  A  LL     SV ++A  L F  
Sbjct: 208 QQIATDMGVSYSNFRKLFKEFTGVSPALYQQELRLQRAKELLSTTNLSVKQIAYKLCFDS 267

Query: 264 SFHFSKAFKHKFGYAPSAVLKNT 286
             +FS  FK K    PS   + T
Sbjct: 268 PDYFSAKFKAKINLRPSEFREQT 290


>UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D140_PAESJ
          Length = 296

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 29/258 (11%)

Query: 40  YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99
           YA  HYR        +P  + +++ +Y   GCG + L + +++ +    +  +     H 
Sbjct: 45  YARHHYR-------HRPEGSEAYIVMYCTDGCGWVKLDDEKRLEVRKGELTLIPAGTPHE 97

Query: 100 Y-------------HCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAEL 146
           Y             H +G +   ++ E    + + IPV + S I           E  E+
Sbjct: 98  YGSSEEEPWTIYWIHLKGELAFSFFGEQGKAAPVPIPVERSSAIIG------LFDECYEM 151

Query: 147 ITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ-RRQ--IEKLIATLHASLQQRWSV 203
           +     + + + V+ L   +   I L+ A  +  P  RRQ  IEK I  +   L+   S+
Sbjct: 152 LLKGYTLDHVIYVSQLACHLAGIIRLVQAHRQAAPSPRRQLDIEKAIQYMTEHLEDNVSL 211

Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263
           A++AA    S     +LF + TG +P +YYL  ++ LA   L     SV  V   + F D
Sbjct: 212 AELAAEAALSVPHFTQLFKKKTGYSPIDYYLRLKIQLASQYLDLTDQSVKAVGIRVGFQD 271

Query: 264 SFHFSKAFKHKFGYAPSA 281
            ++FS+ FK   G +PSA
Sbjct: 272 PYYFSRLFKKIMGKSPSA 289


>UniRef50_D0DCB7 Helix-turn-helix-domain containing protein, AraC type n=4
           Tax=Alphaproteobacteria RepID=D0DCB7_9RHOB
          Length = 310

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 53/97 (54%)

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
           R + +L A    +L +R   A++A     +E+WL R F +  G+TP+ + +  RLD A +
Sbjct: 188 RILRRLEAHAREALGRRIPTAELAELAGLTESWLTRGFRQSLGQTPQRWLMGLRLDAAQA 247

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           L+   G S+ ++A    F D  H S+AF+ + G +P 
Sbjct: 248 LMPDAGRSLADIAAATGFADQAHLSRAFRARHGQSPG 284


>UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WTP1_9SYNE
          Length = 294

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 57/102 (55%)

Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242
           R Q++++I  + A+L Q  S+ D+A+    S+++  R F +  G +P +Y +  R++ A 
Sbjct: 192 RSQLKRVIDYIEANLAQDLSIFDLASLTNMSKSYFSRSFKQSVGISPYQYVIQQRVERAK 251

Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            LLKQQ  S+ ++A    F +  H +KAF+   G  P A  K
Sbjct: 252 QLLKQQSISISDIALDCGFANQTHLTKAFRQMTGTTPKAYQK 293


>UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecalibacterium
           prausnitzii M21/2 RepID=A8S939_9FIRM
          Length = 291

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 44/262 (16%)

Query: 40  YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE-QITLHGNCIIFLKPMDIH 98
           YA +H+     R  K+     S++  YT++G G  L++ GE  + L     + L      
Sbjct: 37  YAQQHFST--ARTDKE-----SYILFYTLRGAG--LIEQGESHVVLSTGQALLLNCRTPQ 87

Query: 99  SYHCEG---LVWEQYWM------------------EFTPTSMMDIPVGQQSVIYNGEIYN 137
           SY C       W  YW+                  + TP  +  + + +   +  G++  
Sbjct: 88  SY-CTAPGQSCWHHYWVHLDGAGVAAMEPLLLPGKKLTPVQLTGVKMQEYFEMLLGQM-- 144

Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASL 197
            E + V  ++T+  A+   LA+   +         + A  +    R+ I +   TL  + 
Sbjct: 145 -EHSTVDSMVTTGLALHEMLALCARS---------ILAQAEATSARQVILQAAETLSKNY 194

Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257
           Q+   +AD+ A    S+++  RLF RY G TP  Y ++ R+  A  LL    +SV E+A 
Sbjct: 195 QKELYLADLLAEAHMSKSYFLRLFRRYMGTTPYNYLVNFRITQAKELLVLTDHSVSEIAQ 254

Query: 258 TLNFFDSFHFSKAFKHKFGYAP 279
            + F D+ +FS  F    G +P
Sbjct: 255 EVGFGDASNFSTRFAKATGQSP 276


>UniRef50_B6R353 Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1
           Tax=Pseudovibrio sp. JE062 RepID=B6R353_9RHOB
          Length = 314

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 48/102 (47%)

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
           + + + I   H + +Q W V D+A     S A   R F+R+ GK P EY  D RL  A S
Sbjct: 209 KSLSRAITEFHRAPEQNWQVTDLAEIAGMSRASFARHFIRHVGKPPMEYVRDWRLMRARS 268

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           LL     S  E+A    +     FSK FK +FG  P    +N
Sbjct: 269 LLTDTNLSSEEIATRCGYNSLPSFSKLFKKRFGMGPGTFRRN 310


>UniRef50_A7NLR2 Transcriptional regulator, AraC family n=2 Tax=Chloroflexaceae
           RepID=A7NLR2_ROSCS
          Length = 342

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 68/157 (43%), Gaps = 14/157 (8%)

Query: 151 EAIKNNLAVAFLTKIIYQWI-------CLMYADGKKDPQRRQIEKLIATLHASLQQRWSV 203
           E     LA     +II +W+       C  +     DP    I + +  +HA  Q  W+V
Sbjct: 180 EVALRRLADILFIQIIQRWVEIEGIERCGWFG-ALHDPL---IGRALELIHAQPQHSWTV 235

Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN-SVGEVADTLNFF 262
           A +A  + CS ++    F    G+ P EY    RL LA  LL    + S G++A  + + 
Sbjct: 236 AALARAVACSRSFFAARFTALVGEPPMEYLRRWRLQLATHLLMDHAHVSAGDIAARIGYH 295

Query: 263 DSFHFSKAFKHKFGYAPSAVLK--NTDQHPTDASPHN 297
               FSKAFK   G AP A  K  +  +  TDA   N
Sbjct: 296 SEAAFSKAFKRSLGIAPGAYRKRHSAARSSTDARDVN 332


>UniRef50_Q1QYW4 Transcriptional regulator, AraC family with amidase-like domain
           n=20 Tax=Gammaproteobacteria RepID=Q1QYW4_CHRSD
          Length = 375

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 3/112 (2%)

Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
           Q + L +  G   P+   + +++A + A+L++  ++ ++A  +  S   L RLF +Y   
Sbjct: 213 QRVPLRHVLGTSQPK---LLEIVALMEANLEEPIALDELARYVDVSRRQLERLFQKYLSC 269

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           +P  YYL  RL  A  LL+Q   S+ E+A    F  + HFSK ++  FG  P
Sbjct: 270 SPSRYYLKLRLTRARQLLRQTSMSIIEIASVCGFVSTPHFSKCYREYFGTPP 321


>UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum
           DSM 5476 RepID=C0E8K8_9CLOT
          Length = 299

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 22/251 (8%)

Query: 60  NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTS 118
           +S++ +YT+ G G I + +G +I ++ +  +F+       Y  E  V W   W     T 
Sbjct: 50  DSYLILYTISGRGSITV-DGNEIDIYAHNAVFINCNSHQFYKTESDVPWVFLWAHINGTG 108

Query: 119 MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIK-----------NNLAVAF--LTKI 165
           +        S++  G +  +++++ A+ +   E I            +NL+V    L  I
Sbjct: 109 VE----PYYSLVNVGRVSQEKISDYADFVELFEEILITSKFNDVRTLSNLSVNLQRLLSI 164

Query: 166 IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225
           I +       + K +     I   +  +  + +++ S+ D+   I  S+ +  RLF +Y 
Sbjct: 165 ILKSRLSSSNNKKHESHIADIRSSVDYIRKNYKRQISIDDIIHRINISKYYFIRLFKQYM 224

Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           G TP +Y ++ R++ A  LL      +G+++  + F D  +F   FK + G  P+    +
Sbjct: 225 GTTPYDYLINYRINQAKILLNSTSMPIGDISQEVGFLDESNFISHFKRQTGIKPTEYRNS 284

Query: 286 T---DQHPTDA 293
           T    + P DA
Sbjct: 285 TLGFHRPPKDA 295


>UniRef50_B8CZL9 Response regulator receiver protein n=1 Tax=Halothermothrix orenii
           H 168 RepID=B8CZL9_HALOH
          Length = 386

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%)

Query: 174 YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233
           Y   +K   R  + K+   ++ +L    ++  +A     S + L +LF +YTGK   EY 
Sbjct: 270 YIAQQKSEDRELVLKVKEAVNKNLSSGLTLNQLAEEFNLSNSSLSQLFRKYTGKNFSEYL 329

Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            D R++ A  LLK  G  V E+AD + F D ++FS  FK + G +P+   +N
Sbjct: 330 DDIRINKARELLKTTGKKVYEIADEIGFDDPYYFSSWFKKRTGVSPTTYREN 381


>UniRef50_A0B2M7 Transcriptional regulator, AraC family with amidase-like domain
           n=22 Tax=Burkholderia RepID=A0B2M7_BURCH
          Length = 355

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 57/105 (54%)

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
           D +    R ++ +++  + A++++  S+ ++A  +  S+  L+R+F  Y   +P  YYL 
Sbjct: 243 DARVGFSRAELIEVVRLMEANIEEPLSLEELARLVRLSQRHLQRMFKVYLNVSPTHYYLT 302

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            RL  A  LL+    S+  V     F    HFSKA++ +FG+APS
Sbjct: 303 LRLKRARDLLRTTDASIARVTTVCGFHSPCHFSKAYRAQFGHAPS 347


>UniRef50_B2S6F3 Transcriptional regulator, ARAC family n=48 Tax=Rhizobiales
           RepID=B2S6F3_BRUA1
          Length = 374

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)

Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241
           Q  ++  +I  + A+L +  ++ ++A TI  S   + RLF +  G++P  YYL+ RLD A
Sbjct: 264 QNSKVLTIIEMMEANLSEPQALINVAHTIGLSRRQVERLFRQEMGRSPARYYLEIRLDRA 323

Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
             LL Q    V EVA    F  + HFSK ++  +G +P
Sbjct: 324 RHLLLQSSMPVVEVAVACGFVSASHFSKCYRELYGRSP 361


>UniRef50_Q2CGL8 Transcriptional regulator, AraC family protein n=1 Tax=Oceanicola
           granulosus HTCC2516 RepID=Q2CGL8_9RHOB
          Length = 253

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%)

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
           P+  +   +I  + A+L+   +V ++AA    SE+  RR F +  G  P+E+ L  RL  
Sbjct: 147 PRFEKFRDVIRKIEAALETPPTVPELAAMANMSESHFRRSFKQVFGVAPQEFILQQRLRQ 206

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           A +LL +   S+ +VA T  F D  HFS+ F+  FG +P +
Sbjct: 207 AATLLTRTNRSIAQVALTCGFGDQSHFSRQFRRFFGESPRS 247


>UniRef50_B1JB07 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas putida
           W619 RepID=B1JB07_PSEPW
          Length = 345

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 56/111 (50%)

Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229
           I L+++D K      ++ + +  +H  ++   S+A++A      E  L RLF ++ G TP
Sbjct: 225 IPLLHSDSKAFALDGKVRRAVFLMHQHIRAPLSIAEIAEKANIGERQLSRLFTKHLGVTP 284

Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            EYY   RL+    LL+   N V +VA    F D  HF++ F   +G  PS
Sbjct: 285 SEYYRRVRLEQGCWLLESTANPVTQVAYETGFTDLSHFNRQFSQAYGMLPS 335


>UniRef50_A8TRB7 Probable transcriptional regulator n=1 Tax=alpha proteobacterium
           BAL199 RepID=A8TRB7_9PROT
          Length = 344

 Score = 63.5 bits (153), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 47/93 (50%)

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
           +I+ +  +L++  S  D+A     S   L RLF +Y G TP  YYL  RL  A  LL Q 
Sbjct: 223 VISEMELNLEEPLSQTDLAERAGLSTRQLERLFRKYLGATPTRYYLTLRLQRARQLLVQT 282

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
             S+  VA    F  + HFSK ++  FG  P A
Sbjct: 283 SMSILSVALACGFVSASHFSKCYRECFGRTPRA 315


>UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales RepID=D1PEF6_9BACT
          Length = 291

 Score = 63.5 bits (153), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 14/241 (5%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQY 110
           D +K  I + +  +Y  +G G     +  +  +    I  L P + HSYH  G   W+ Y
Sbjct: 46  DLQKGRILDEYQLLYQPEGEGVFCSAHLPETKIKAGDIFLLFPGEWHSYHPSGTKGWKSY 105

Query: 111 WMEFTPTSMMD-IPVG----QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI 165
           W+ F   ++ D +  G    ++ + + G  Y+ E+  + E        +   A   +  I
Sbjct: 106 WIGFKGKNIDDRVKAGFLSPEKPIYHVG--YSNEIIALYEEAYKTAQEEVAFAQQTMAGI 163

Query: 166 IYQWICLMYADGK-----KDPQR-RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
           +   I  MY+  +     KD +    I K    +  SL+   ++ ++A  +  S +  R+
Sbjct: 164 VNHLIGKMYSLERNIVLSKDTKHVDMINKARLRIRESLEDTLTIQEIAQELGISYSSFRK 223

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           LF  +TG  P  Y  + +L  A  LL     S+ E+A  LNF    +FS  FK + G  P
Sbjct: 224 LFKEHTGFAPALYQQNLKLQRAKELLSTTDESIKEIAYRLNFESPDYFSAKFKIQTGMKP 283

Query: 280 S 280
           S
Sbjct: 284 S 284


>UniRef50_A3W1D7 Transcriptional regulator, AraC family protein n=3
           Tax=Rhodobacteraceae RepID=A3W1D7_9RHOB
          Length = 342

 Score = 63.5 bits (153), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%)

Query: 178 KKDPQRRQIE-----------KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226
           ++ PQR  I            + I  +  +++   S+ D+A    CS   + RLF++Y  
Sbjct: 223 ERGPQRASISNALDSRNPLLVRAIKVMQTNIETPISMDDLADAAGCSRRQMERLFVKYLR 282

Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           KTP  ++ D RLD   SLL++   SV E+A    F     F K F+ +FG++P 
Sbjct: 283 KTPYRFFRDLRLDHGRSLLRETDLSVTEIAMASGFASPMVFIKTFRSRFGHSPG 336


>UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE
          Length = 291

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 151 EAIKNNLAVAFLTK-IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209
           E++ N LAV+FL      Q     Y  G  D +   + + IA    +L+Q   +AD+A  
Sbjct: 159 ESLANALAVSFLRNHASTQPQVAQYESGLGDRKLLLVTRYIAD---ALEQDIKLADLAQL 215

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
           +  S++   R F +  G TP +Y L  R++ A  LLKQ   S+ ++A    F    HFS+
Sbjct: 216 VGVSQSHFSRQFKKSMGLTPYQYLLQQRIERAKQLLKQTQQSLVDIALVCGFDSHSHFSR 275

Query: 270 AFKHKFGYAPSA 281
            F+   G  PSA
Sbjct: 276 QFRKATGMTPSA 287


>UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
           35704 RepID=B0NGA4_EUBSP
          Length = 295

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 117/255 (45%), Gaps = 19/255 (7%)

Query: 41  ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100
           A +HYR     ++K+   A  ++ +Y  +G G I ++ GE   +  +    +     H Y
Sbjct: 47  ARDHYR-----ERKEG--AEQYILIYCTEGKGTIEVE-GEVFEMRKSGAFCIPCKKGHRY 98

Query: 101 HCEGL-VWEQYWMEFTPTSMMDIPVGQQSVI-YNGEIYNQELTEVAELITSPEAIKNNLA 158
           + +    W   W+ F   +    P+ +  V+  N    +  +  +  L+     ++ N  
Sbjct: 99  YADAKDPWSILWVHFKGENTAYFPIDEPHVVPMNSRHSDNRMMVLFNLLF--RVLRRNYT 156

Query: 159 VA---FLTKIIYQWICLMYADGKKDP---QRRQIEKLIATLHASLQQRWSVADMAATIPC 212
           +    ++++++   +  +Y   K D    Q R +  +I  ++ +L +  ++ +++  +  
Sbjct: 157 LGNFIYISQVLSLILSEVYYREKVDESSVQDRHVTMVIRFMYENLTRSLTLEEISEEVQL 216

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           S ++L  +F   TG++P E+++  ++  A  LLK     + EV+  L + D ++FS+ FK
Sbjct: 217 SRSYLNTIFKNQTGRSPVEFFIHLKMQEACKLLKNTNLYIYEVSSRLGYEDQYYFSRIFK 276

Query: 273 HKFGYAPSAVLKNTD 287
              G +P    KN D
Sbjct: 277 KVVGVSPKD-YKNGD 290


>UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=Serratia
           RepID=A8GGG4_SERP5
          Length = 282

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 16/251 (6%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114
           P +   ++  Y + G G +  + G    + G   + + P D+ +Y  +    W   W+E 
Sbjct: 33  PAVRQHYLFHYVISGTGVLHSEYGAFPVVAGEGFL-IHPHDVTTYRADKKDPWHYMWLEV 91

Query: 115 TPTSMMDI----PVGQQSVIYNGEIYN---QELTEVAELITSPEAIKNNLAVAFLTKIIY 167
                  I     + +Q  IY     +   Q L+ + +L++  +  ++ L    L+ + +
Sbjct: 92  DGLVAGKIFEECRLSRQFPIYRPRKTDETPQALSYLRQLVSHDD--EHRLKTLGLSYLFF 149

Query: 168 QWI---CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
             +    L  +D     + + + K +  +     +  ++  +AA    + ++L RLF   
Sbjct: 150 SALIDNALQGSDEHPSDKTQHLHKAVKLIENRYHEHLTIERLAAYCNINRSYLCRLFKGA 209

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            G  PKEY L+ R+ LA SLL+    ++  V  ++ + +  HFSKAFK   G +P A  +
Sbjct: 210 YGIGPKEYLLNFRMTLATSLLRNSRTAIKVVGISVGYENQLHFSKAFKQVHGVSP-AQWR 268

Query: 285 NTDQHPTDASP 295
             +Q P +ASP
Sbjct: 269 QENQ-PDNASP 278


>UniRef50_A3SJ23 Transcriptional regulator, AraC family protein n=1 Tax=Roseovarius
           nubinhibens ISM RepID=A3SJ23_9RHOB
          Length = 343

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           + + I  +   L+Q  S+ +++     S+  L RLF  Y G+TP  YY D RLD A  L+
Sbjct: 225 VRRAITEMERHLEQPLSLPEISDRAGLSQRQLERLFRTYVGRTPALYYRDIRLDRARGLV 284

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            Q    + +VA    F    HFS+++K +FG  P
Sbjct: 285 TQTEMPLAQVALASGFSTQVHFSRSYKERFGLPP 318


>UniRef50_B4D5Y6 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter
           flavus Ellin428 RepID=B4D5Y6_9BACT
          Length = 297

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 27/245 (11%)

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMM 120
           +   +  +G G +LL  G++  L    +    P   H+   E G    +Y+++F      
Sbjct: 61  YAVEFVAEGEGSLLLA-GKRCRLRPGVVFAYGPRVPHTIRTEPGRPMLKYYVDF------ 113

Query: 121 DIPVGQQS--VIYNGEIYNQELTEVA---ELITSPEAIKNN----------LAVAFLTKI 165
              VG+++  ++ +G +    L +V+   E+    E+++ N          L  A +  +
Sbjct: 114 ---VGRRAKELLEDGPVRPGRLAQVSTPGEIREIFESLQRNGGGESPFGPALCAALIPVL 170

Query: 166 IYQWICLMYADGKKDPQRRQI-EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           + +        G  DP+     ++  A + A   +  ++ D A     + ++L RLF R+
Sbjct: 171 LLKIAERAVPAGGADPRALATYQRARALIDARFLEFKTLDDAARAAGVNLSYLCRLFQRF 230

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
             +TP  + L  +++ A  LL  +G  V E A  L F D F+FS+AF+  FG AP   L 
Sbjct: 231 DHQTPYRHLLHLKMNRAAQLLLDRGMLVKEAAAELGFSDPFNFSRAFRSVFGLAPEKFLA 290

Query: 285 NTDQH 289
            T + 
Sbjct: 291 RTQRR 295


>UniRef50_B1F7R4 Transcriptional regulator, AraC family n=1 Tax=Burkholderia
           ambifaria IOP40-10 RepID=B1F7R4_9BURK
          Length = 301

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 51/102 (50%)

Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
           + DPQR  I+  I  +  +L        +A+    S A   R F + TG TP +Y L  R
Sbjct: 186 RADPQRLAIDAAIDEIADNLAIHIDSQTLASNAGVSVAQFTRNFQKATGLTPHQYRLHRR 245

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           +++A   LK  G+S+  +AD L F D  HF++ FK   G  P
Sbjct: 246 IEVAKEKLKAGGDSLATIADELGFADQAHFTRTFKQFAGVTP 287


>UniRef50_Q1QUP9 Transcriptional regulator, AraC family with amidase-like domain n=1
           Tax=Chromohalobacter salexigens DSM 3043
           RepID=Q1QUP9_CHRSD
          Length = 337

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 51/96 (53%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           Q+ K+I T+  +L+   S   +AA +  S   L R F    G TP  YYL  R++ A  L
Sbjct: 221 QLRKVIRTMRRTLETPLSAPALAALVGLSPRQLERRFKAELGVTPIRYYLWLRINRAHRL 280

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           L+Q   SV EVA    F    HFS+A++  FG APS
Sbjct: 281 LQQTDLSVAEVASCAGFGSLEHFSRAYRRFFGCAPS 316


>UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28MQ0_JANSC
          Length = 313

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 25/269 (9%)

Query: 28  SSGISLISLWHTY-ADEHYRVIWPRD----KKKPLIANSWVAVYTVQGCGKILLKNGEQI 82
           S+G + ++ +  Y A  H     P+D    K +  +  ++  V+  +G G++ L +G + 
Sbjct: 36  SAGFTQVAPYAVYPAGTH-----PKDHLFSKTRGRVLQAYQIVFISKGRGRVELGSGRKA 90

Query: 83  T-LHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTSM-MDIPVG----QQSVIY--NG 133
             +H   +  L P   H Y  E  V W ++W+E   T+  M +  G     + +I   N 
Sbjct: 91  QEIHAGQVFVLFPNVWHRYAPEPSVGWTEHWVECKGTAFDMSLNAGLLDPGRPIIRHPNF 150

Query: 134 EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIE--KLIA 191
           E  +    E+  L  + +A+ N   ++ L+  +   I     +  +D   R +   ++I 
Sbjct: 151 EAVHDTFAEIHGLAGT-DAVGNQPVLSMLSLKLLA-ILAGPRNANEDSTNRLVNSARMIL 208

Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251
             H + Q+   + D+A  +  S + LRR F   TG + K+Y +  R+  A  LL     S
Sbjct: 209 LEHCTGQR--PMEDIADELNVSYSTLRRTFRVQTGMSMKDYQMAMRIQKAKDLLDNTELS 266

Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           V  VA  L F  +FHFS  F+   G  PS
Sbjct: 267 VKGVAGQLGFSSAFHFSSQFRKTVGCPPS 295


>UniRef50_C6BZV3 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio
           salexigens DSM 2638 RepID=C6BZV3_DESAD
          Length = 285

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 22/241 (9%)

Query: 66  YTVQGCGKILLKNGEQI----TLHGNCIIFLKPMDIHSYH-----CEGLVWEQYWMEFTP 116
           Y + GC  IL      I    T+H N     +   + S++        L ++    E  P
Sbjct: 47  YCLNGCSDILQPGSISIIEPETVHSNSPCCTERRHLRSFYFSEKFVRSLNYKLLGDENVP 106

Query: 117 TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
           +   +I +  + +  N  + + +L    E + + EAI + L+       +Y+       D
Sbjct: 107 SPFRNILLENKQLWQNLSVLHHKLLSPVETLETDEAILSVLSG------LYRHA----GD 156

Query: 177 GKKDP--QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
           G   P  + R++  ++  LHA  ++  S+A++A    C+E  L R+F  + G TP  + +
Sbjct: 157 GTIRPGSEDRRVSMIVDYLHAHAERNLSLAELADLAGCTEFHLIRIFRSHKGMTPHSFLI 216

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294
             RL+ A +++    + + + A    F D  H ++ FK ++G  P    K +   P    
Sbjct: 217 QLRLEKARAMIATN-SPIADTAALCGFSDQSHLTRLFKIRYGLTPRQYQKASGGPPGSKE 275

Query: 295 P 295
           P
Sbjct: 276 P 276


>UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium
           prausnitzii M21/2 RepID=A8SBA6_9FIRM
          Length = 286

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 1/94 (1%)

Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261
           S+ D+A ++  S + L R+F+   GK+P +Y  + R++ A  LL+    S+ EVA ++ F
Sbjct: 191 SIDDVAKSVGVSRSHLYRVFMLNVGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGF 250

Query: 262 FDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASP 295
           FD F+FS+ FK   G  PS       Q    ASP
Sbjct: 251 FDQFYFSRVFKRAKGVPPSKYFA-AQQDADPASP 283


>UniRef50_C6CVX7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CVX7_PAESJ
          Length = 308

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 60/109 (55%)

Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
           K+  + R +  +++ +   L  + S+ +++ T+  +   L+  F R+TGKT  EYY   +
Sbjct: 178 KEKEEARLVSAIVSLMEERLSSQLSLLEISRTLHIANTKLKEQFKRHTGKTVMEYYAHMK 237

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           L+ A  L+++ G++  E+A  L F    +FSKAFK   G +PS   K+ 
Sbjct: 238 LEKAKLLIREDGHNFTEIALQLGFSSVHYFSKAFKRSTGMSPSEYAKSV 286


>UniRef50_A6CZ62 Transcriptional Regulator, AraC family protein n=4
           Tax=Gammaproteobacteria RepID=A6CZ62_9VIBR
          Length = 301

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 54/106 (50%)

Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242
           + Q+ K+   +  ++    +V D+A  + CS+ +  R F +  G TP +Y ++ RL+ A 
Sbjct: 196 QHQVSKIDQYIEENIGNNIAVDDLAELLGCSKFYFLREFKKLIGVTPYQYLMNKRLEQAR 255

Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
             L     ++   A  L F D  HF++AFK+ FG  P   +KN + 
Sbjct: 256 VALSSAPVNIALTAHELGFNDQSHFTRAFKNHFGITPGQYIKNNEN 301


>UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CX81_PAESJ
          Length = 272

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 15/236 (6%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114
           P I + +   +  +G G + + +       G   +   P  + SY  +    W   W+ F
Sbjct: 36  PGIRDHYKVHFVHRGTGTVQIGSSTFKLTSGQAFL-AYPGKVISYQADAFDPWSYSWIGF 94

Query: 115 TPTSMMDIP-----VGQQSVIYNGEIYNQELTEVAELITSPEAIKN------NLAVAFLT 163
               + ++        ++SV    + +   L E+  L+ S +  KN      +L + FLT
Sbjct: 95  RGEQVGEVLERTKLTSEESVFPMDKQFMPNLYEL--LLESADHPKNHDLRLTSLLIEFLT 152

Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
            +I        A  +   Q   I + +  +H+   +  +V  MAA++     +L  LF  
Sbjct: 153 VLIDSLPSSADAGVQPRKQDTYIHRSLDFIHSHFSEPITVQQMAASLGLDRKYLSYLFKE 212

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
             G  P++Y L+ R+D A  LL++   S+GEVA ++ + D+  FSK FK   G  P
Sbjct: 213 AMGLPPQQYLLNYRMDRAGELLRKGEYSIGEVARSVGYQDALLFSKMFKKLKGVPP 268


>UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N3X5_9BACT
          Length = 286

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           ++++ A   A+L +  SV D+A    CS     R F +  GK+P E+  D ++ LA+ LL
Sbjct: 184 LKRVHAYALANLSRPLSVGDLADAAGCSRWHFSRRFQQLEGKSPHEFVTDLKMRLAVRLL 243

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +    SV EVA+   F D+ +F K F++ +G +P+      +
Sbjct: 244 QTTNGSVKEVAENCGFEDASYFCKVFRNHYGVSPAGFRSGAE 285


>UniRef50_Q2BYZ8 Transcriptional regulator, AraC family protein n=6 Tax=Vibrionaceae
           RepID=Q2BYZ8_9GAMM
          Length = 293

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 5/123 (4%)

Query: 173 MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232
           +Y     +P+ R I +LI       Q++WSV DMA  +  +++ LRR  L   G +  + 
Sbjct: 159 VYRFNYDEPKERTIARLIT---QDPQRKWSVDDMAKALFTTQSTLRR-HLAKEGVSFSQL 214

Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292
            LD R+ LAL+ L     S+ ++++   F  + +F  AFK K+G  PS   + T +   D
Sbjct: 215 LLDVRMGLALNYLTFSNYSISQISNRSGFGSAAYFCDAFKRKYGITPSQ-FRTTSRQEND 273

Query: 293 ASP 295
            +P
Sbjct: 274 VNP 276


>UniRef50_D1N8U7 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N8U7_9BACT
          Length = 298

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 48/97 (49%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           +I  L+ TL A     WS+  MA     S A  RR F R  G+ P  + L  RL+ A  +
Sbjct: 187 RIASLVKTLEADFAGEWSLRRMAEHTGFSVACFRRQFRRIIGEPPVAWLLSLRLEKAAMM 246

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           L+    S+ E A+   F DS +F++ F  +FG  P A
Sbjct: 247 LQTGDGSIAETAEACGFPDSNYFTRMFHRRFGATPRA 283


>UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales RepID=A6LBM0_PARD8
          Length = 295

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 27/247 (10%)

Query: 58  IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTP 116
           I N +  VY  +G G    ++ +   ++   +I L P + HSY+ +    W++YW+ F  
Sbjct: 57  ILNEYQLVYITKGSGYFSSQSCKSQKINAGTMILLFPGEWHSYYPDRETGWDEYWVGFRG 116

Query: 117 TSM----------MDIP---VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163
             +           + P   +G  + I    +Y   L   +E  +  + + +++ +  L 
Sbjct: 117 IHIDKRVEKKFFTKEEPLHRIGLSATIVG--LYEDILKFASEEKSGYQQMISSIVLHILG 174

Query: 164 KIIYQW----ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
            + Y+         Y   K +  R         +  +++   S  ++AA +    +W RR
Sbjct: 175 SVYYKEKNNSFTNTYVVDKINEAR-------ILMKENIEDPLSPEEIAARLGLGYSWFRR 227

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           +F  YTG +P +Y L  +L  A  LL     ++ E+A +L+F ++  FS  FK K G  P
Sbjct: 228 MFKEYTGVSPAQYQLQQKLLRAKELLTSTPLTISEIAYSLHFENAGQFSTFFKKKEGVTP 287

Query: 280 SAVLKNT 286
           S     T
Sbjct: 288 SEFRDRT 294


>UniRef50_A7VPJ2 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
           RepID=A7VPJ2_9CLOT
          Length = 250

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%)

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
           +H    +   + ++A     S ++L ++F ++TGKTP +Y  D R+ LA  LL+    S+
Sbjct: 156 IHKHYMELLELGEIAEKFGFSVSYLTKIFTKFTGKTPSKYIRDYRISLAKQLLRNPNLSI 215

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPS 280
             V   + + D FHFSK F+   G +PS
Sbjct: 216 SVVGKKVGYPDQFHFSKIFRQATGMSPS 243


>UniRef50_A6E5Z6 Probable transcriptional regulator n=1 Tax=Roseovarius sp. TM1035
           RepID=A6E5Z6_9RHOB
          Length = 327

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 53/94 (56%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           + K +  +  +++   S A++A +I  S   L RLF R+ GK+P+ Y  D RL  A +L+
Sbjct: 226 LRKALKAMETNIEFPQSTAEIAQSINLSARQLERLFARHLGKSPQAYSRDLRLHRARTLI 285

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           +    S+ E+A +  F  S HFS+ FK ++G  P
Sbjct: 286 EGSSLSLTEIALSCGFEGSAHFSRLFKQRYGMTP 319


>UniRef50_Q0SE50 Transcriptional regulator, AraC family protein n=8 Tax=Nocardiaceae
           RepID=Q0SE50_RHOSR
          Length = 315

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 4/148 (2%)

Query: 139 ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQ 198
           +L E A+L+ +P  +   LA A  +  I          G   P+ R +++++  L+    
Sbjct: 169 QLREPADLLANP-VVGPQLAGAITSAFILAVTPDEEVRGGA-PRPRIVKRVLDGLNDDPA 226

Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLK--QQGNSVGEVA 256
           + W+ ADMA     S   L+  F  Y G++P E  LD RL  A + L+  + G +V EVA
Sbjct: 227 RAWTAADMAELAGTSVRRLQEGFREYVGRSPSECLLDIRLSRADADLRALEPGVTVSEVA 286

Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
               F  +  FS A++ ++G +PS +++
Sbjct: 287 ARWGFTHAGRFSAAYRRRYGKSPSELIR 314


>UniRef50_A1B7U6 Transcriptional regulator, AraC family n=5 Tax=Alphaproteobacteria
           RepID=A1B7U6_PARDP
          Length = 322

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 52/96 (54%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           Q+++L A L     +R +VA+MA ++  SE+W   +F   TG TP ++ L  R+DL   L
Sbjct: 218 QMKRLQARLATRPDRRLTVAEMAESVGLSESWFAHVFKNTTGTTPLQWQLGQRIDLVQRL 277

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           L +    + ++A  L F D  H ++ F+   G  P+
Sbjct: 278 LLESDLRLADIAAQLGFSDQAHLTRVFRKSCGEPPA 313


>UniRef50_C2AR01 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Tsukamurella paurometabola DSM 20162
           RepID=C2AR01_TSUPA
          Length = 289

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
            I   +  +HA  +++W+VA++A     S +     F R  G  P  Y  D RLD A  L
Sbjct: 186 HIGPALTAIHAHPERQWTVAELARIALLSRSAFAARFTRLLGVAPAGYVADRRLDRAAEL 245

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           L+     VG+V  T+ +     FS+AF  +FG  P A  + T+
Sbjct: 246 LRDSALPVGDVGRTVGYGSEAGFSRAFARRFGVPPRAWRRATE 288


>UniRef50_B5XWK6 Transcriptional regulator, AraC family n=5 Tax=Klebsiella
           RepID=B5XWK6_KLEP3
          Length = 306

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 3/119 (2%)

Query: 177 GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDA 236
           G  DP+   + + I  LH +  +RW+V D+AA    S + L   F   TG TP  Y L  
Sbjct: 191 GLSDPR---VAQAIRLLHQAPARRWTVNDLAADCALSRSTLFERFTDLTGMTPMGYLLGW 247

Query: 237 RLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASP 295
           R+ LA+  L + G S+ ++A+ + +  +  FS AF    G +P    +     P    P
Sbjct: 248 RMTLAMQWLSETGISIADIAERIGYGSASAFSVAFTRYTGISPGKYARQRATQPPPGQP 306


>UniRef50_Q1GGF5 Transcriptional regulator, AraC family with amidase-like domain
           n=13 Tax=Rhodobacterales RepID=Q1GGF5_SILST
          Length = 335

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%)

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
           +  S+++  S+  + A +  S   L RLF RY  ++P   Y D RL  A +L+ +   SV
Sbjct: 241 MQESIEEPLSIGTLCARLDISRRQLERLFSRYLDQSPMHVYSDMRLSHAFALMNETSMSV 300

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAP 279
            E+A    F  + HFS+ FK KFG +P
Sbjct: 301 TEIALASGFNSATHFSRQFKRKFGASP 327


>UniRef50_C0A9I7 AraC-type DNA-binding domain-containing protein-like protein n=1
           Tax=Opitutaceae bacterium TAV2 RepID=C0A9I7_9BACT
          Length = 271

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/238 (21%), Positives = 102/238 (42%), Gaps = 13/238 (5%)

Query: 49  WPRDKKKPLIANSWVAVYTVQGCGKIL-LKNGEQITLHGNCIIFLKPMDIHSYHCEGLVW 107
           WPR + K      +  +  V+G  + +  + GE++  H   I+ + P ++H+Y       
Sbjct: 43  WPRRRLK-----EFELILAVRGEFEFINHETGERVEQHAGDILVIHPGELHTYRLLSSAE 97

Query: 108 EQYWMEFTPTSMMDIPVGQ---QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164
             ++          +P+ Q   +   +  E    EL   A+ +     + +   +A + +
Sbjct: 98  HAFFSCIHCMMTPRVPLDQCPPRLTHWETEHAMGELFRRADDLRRTNGLGSGKLLAGVVR 157

Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           +I+ ++     +  + P   ++  ++  L A L +  S  D+A     +   +  +F   
Sbjct: 158 LIWLYL----QEPPRPPADARLTAMLDYLEAHLHKHPSRLDLAQRFRMTPQRINAIFKHE 213

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282
            G +P  Y L A    A +L++    SV E A  L F + FHFS+ FK  +G+ PS +
Sbjct: 214 LGMSPGAYVLRALAGRAYALMRDDQLSVKETAHRLGFANPFHFSRVFKKIYGHPPSEI 271


>UniRef50_C6B4M4 Transcriptional regulator, AraC family n=8 Tax=Rhizobium
           RepID=C6B4M4_RHILS
          Length = 299

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 118/272 (43%), Gaps = 38/272 (13%)

Query: 37  WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP-- 94
           WH  +  H R+      +K L A+    +   +G G++   NGE   LHG  + FL P  
Sbjct: 15  WHAPSLSHRRIRL----QKGLYADFHHFLLLGEGSGELHFDNGEHRPLHGPLLAFLPPQA 70

Query: 95  ---MDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE-----------L 140
              + I +     LV        +P  M+D  +G +   Y+  I+ ++           +
Sbjct: 71  RCDLSISAGTAAHLVGA------SPQIMVDA-IGDKVESYSLRIFTEQRKLVEALDPLTV 123

Query: 141 TEVAELITS-PEAIKNNLAVAFLTKIIYQWICLMY----ADGKKDPQRRQ------IEKL 189
           TE++ LI+     + +    +++    Y  + LM     +DG++  QR Q      +++ 
Sbjct: 124 TEISPLISGFVRELGDPSRSSWMVASAYIRLMLMALWRGSDGERSEQRGQGEVGSILQRY 183

Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249
              + A  +Q   ++D AA +  +   L     R  G++P +   +  +  A   L++  
Sbjct: 184 RQLVEAGFRQHRPISDYAAELGVTADRLHSTCQRALGRSPIQLLHERVVQEAKLRLERSA 243

Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
            ++ E++D+L F D  +FS  FK K G +P+ 
Sbjct: 244 RNIQEISDSLGFRDPTYFSHFFKRKTGLSPAG 275


>UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n=1
           Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDF7_9BACT
          Length = 274

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 19/269 (7%)

Query: 25  NVISSGISLISLWHTYA-----DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNG 79
           +++ +G +LIS   TY       +HY   W R +    + + +  +   +G G I  +  
Sbjct: 2   DILGAGSALISKGDTYPPSIHPSDHY-FDWMRGR----VLDEFQLLLITKGSGTIETEAT 56

Query: 80  EQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFTPT-------SMMDIPVGQQSVIY 131
           +  T+    +  L P   H Y   +   W ++W+ F  T       S +  P        
Sbjct: 57  DSFTITAPIVFLLYPGVWHRYRPSQDTGWHEHWIAFRGTFADELLRSGLISPEKPFHKTG 116

Query: 132 NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-MYADGKKDPQRRQIEKLI 190
           + E    ++  + + + +      ++A A L +I+   I L    + +  P R+ I +  
Sbjct: 117 HSETLLAQVQLIQDEVRAEAHGYRSIAAAALMQILALAITLPQRREEENQPMRKVIRRAC 176

Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250
             +     +     ++AA +     + RR+F ++TG +P  Y+   RL     LL+   N
Sbjct: 177 FLMRERSDRPLMPEELAAELNIGYTYFRRMFRKFTGISPNRYHAQLRLRRVKRLLRDTSN 236

Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           S+ E+AD L F   +H S  FK + G +P
Sbjct: 237 SIVEIADVLGFNSPYHLSNWFKKETGRSP 265


>UniRef50_A8LK68 HTH-type transcriptional regulator n=43 Tax=Rhodobacterales
           RepID=A8LK68_DINSH
          Length = 339

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           ++ K+I  + A++++  S + +A+ I  S   L RLF RY  ++PK YY++ RL  A +L
Sbjct: 232 RLSKVIQMMEANIEEPISPSVLASDIGMSTRQLERLFRRYLNRSPKRYYMELRLQKARNL 291

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           L Q   SV  VA    F    HFSK ++ ++   P
Sbjct: 292 LMQTDMSVINVALACGFTSPSHFSKCYRSQYNTTP 326


>UniRef50_A9C0Z2 Transcriptional regulator, AraC family n=1 Tax=Delftia acidovorans
           SPH-1 RepID=A9C0Z2_DELAS
          Length = 356

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 9/152 (5%)

Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP-----QRRQIEKL 189
           +++    E     T P A+ + L V  L    Y    L + D +        +R     L
Sbjct: 200 LFDLMRAEALRTGTEPSAVMDRL-VGLL--FFYGLRQLAHGDARARGIWSLLRRPGFAPL 256

Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249
           +A L     + WSVADMAA +  S A   R F    G+ P+++ L  R+ LA   L  QG
Sbjct: 257 VAELLREPARNWSVADMAARVCLSRATFFRQFAEACGQPPQQFLLLLRMQLAARRLA-QG 315

Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
            ++G+VA+ + +     FS+AFK   G  P A
Sbjct: 316 EAIGQVAEAVGYESYAAFSRAFKRVMGEQPGA 347


>UniRef50_Q7UU29 Probable lactose operon transcription activator n=1
           Tax=Rhodopirellula baltica RepID=Q7UU29_RHOBA
          Length = 298

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 5/153 (3%)

Query: 138 QELTEVAELITSP---EAIKNNLAVAFLTKIIYQWICLMYA--DGKKDPQRRQIEKLIAT 192
           +ELT++  +I++    +  ++   V+ +T+ +   I    +  DG         E +   
Sbjct: 145 KELTDLFSIISAEGKDDQFRSRDIVSLITRAMIIKIAQRKSTTDGDSPKAFEVYEDIRQY 204

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
           +  + +   S+A +A     +  ++ RLF RY  +   +Y L  R++ A  LL  QG  V
Sbjct: 205 MEDNFRDLTSIAQVAEQCGYTTVYVSRLFKRYASRGAYQYLLRLRMNYAADLLFTQGMKV 264

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            +VA+ L F D+F FS+AFK  +G  PS + ++
Sbjct: 265 RDVAEMLQFADAFQFSRAFKRVYGVPPSQLKRS 297


>UniRef50_Q3IVG7 Transcriptional regulator, AraC family with amidase-like domain n=5
           Tax=Rhodobacteraceae RepID=Q3IVG7_RHOS4
          Length = 316

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 3/114 (2%)

Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
           Q + L    G ++     + + IA + A +++  S   +A  +  S   L RLF R+   
Sbjct: 200 QRVSLQSRHGMRNAH---LSRAIALMEAHVEEPLSPFALADRLGISTRQLERLFGRFLNT 256

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           +PK Y ++ RL  A  L+ Q   S+ E+A    F  + HFSK F+ ++G AP A
Sbjct: 257 SPKRYMMEVRLTRARHLIVQTEQSISEIAMACGFTSTSHFSKVFRSRYGVAPVA 310


>UniRef50_A7B5D7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
           29149 RepID=A7B5D7_RUMGN
          Length = 289

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 10/135 (7%)

Query: 161 FLTKIIYQWICLMY---------ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211
           + ++II  ++C ++         +     P        I  L+ +L  + +V+++A    
Sbjct: 154 YYSQIIVSYLCQLFLSLAEQGTLSSVSSVPDAITFRNAINFLNTNLDCQPTVSEIAEYCN 213

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
            S+A L+R+F +Y G +  +Y L  ++++A  LL Q G  V  VA+ L F    +FSKAF
Sbjct: 214 ISDASLKRIFDKYAGISVHKYLLKLKINVAKKLL-QDGGQVSVVAENLGFASQSYFSKAF 272

Query: 272 KHKFGYAPSAVLKNT 286
           K + G+ PS   KN+
Sbjct: 273 KRETGFTPSDFAKNS 287


>UniRef50_D1N547 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N547_9BACT
          Length = 288

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 51/97 (52%)

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
           L+  L  + ++ W+V +MA     SE+  RR F  YTG  PK Y    +L LA  +L   
Sbjct: 188 LLVELRRTPERWWTVGEMAKECGLSESHFRRAFHAYTGMPPKLYLDRMKLQLAAEMLIST 247

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           G ++ +VA    + D FHFS+ FK   G +P +  ++
Sbjct: 248 GLTLAQVAARFGYVDPFHFSRRFKALNGMSPDSYRRH 284


>UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA
          Length = 278

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 3/105 (2%)

Query: 182 QRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
           QRRQ   +   +  L    ++  ++  +A     S  +L ++F   TG +P  Y ++ RL
Sbjct: 169 QRRQQQIVNYTVYYLENHYKEEITLEKLAQDQFLSPTYLSKIFKEATGVSPINYLIEIRL 228

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
             A  +LK +  ++ EVA  + + D++HFSK+FK  +G +PS VL
Sbjct: 229 KRAKDMLKNENLTIKEVASAVGYQDAYHFSKSFKKLYGVSPSGVL 273


>UniRef50_D2PRH8 Transcriptional regulator, AraC family n=1 Tax=Kribbella flavida
           DSM 17836 RepID=D2PRH8_9ACTO
          Length = 271

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 18/226 (7%)

Query: 68  VQGCGKILLKNGEQITLHGNCIIFL---KPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPV 124
           + G G+I L    +    G C +F     P   H      LV   + M F P    D P 
Sbjct: 46  LDGIGRIELDGRTRDLAPGTCAVFAPGDAPRAQHDPRRRLLV---FGMHFEPDG--DGPA 100

Query: 125 GQQSVIYNGEIYNQEL-------TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177
                +  G++ ++ L        + A         ++ L +      + Q +C ++   
Sbjct: 101 SVVPEVRWGDVPDRVLLGALAKACDAAYRRQDAAGGQDRLGLRQAELCLEQILCSIWEAA 160

Query: 178 KKDPQRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
            +  Q      I+++   +     + WSVA+MAA    S A   R F+   G++P +Y +
Sbjct: 161 HRSGQSASDAAIDEVAQLIRQDPGRDWSVAEMAAAAALSRAQFTRRFVAQHGRSPAQYLI 220

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            AR+D A  LL + G +V   A  L + D  +FS+ +K + G  PS
Sbjct: 221 QARIDRAHQLLTESGMTVTRTAAALGYTDVPYFSRQYKQRTGRLPS 266


>UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=Clostridiales
           RepID=A9KN44_CLOPH
          Length = 278

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 109/247 (44%), Gaps = 14/247 (5%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104
           Y+   P  +  P + + ++  Y V G G     N +   L    +  + P    +Y+ + 
Sbjct: 28  YQRCEPNYQWGPGVRDHYLIHYIVSGKG-YYETNHKTFPLTSGDVFLIYPDTQVTYYADA 86

Query: 105 L-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159
           L  WE YW+ F+ +     +       +S + +   Y +++ +  +L    EA  N  A 
Sbjct: 87  LDPWEYYWVGFSGSDAGLILEATDFSNESPVISSCSYGEKVKD--QLYQIYEARGNEFAN 144

Query: 160 AF-LTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWSVADMAATIPCS 213
           A  +   +Y  + L  +      ++       ++K I  + +      ++ D+AA +  S
Sbjct: 145 AVAMAGQLYITLSLFLSGASNHNKKHHQNLDYVQKGITYMESHFSYPITIDDVAAYVGIS 204

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            + L R F  + GK+PKEY  + R+  + +LLK    S+G +A ++ + +  ++SK F+ 
Sbjct: 205 RSHLFREFKAHLGKSPKEYLSEYRIKYSCTLLKNTDLSIGAIATSVGYDNGLYYSKVFQS 264

Query: 274 KFGYAPS 280
             G  PS
Sbjct: 265 VKGMPPS 271


>UniRef50_Q2S8T9 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2S8T9_HAHCH
          Length = 278

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 10/142 (7%)

Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWIC----LMYADGKKDPQRRQIEKLIATLHASLQQR 200
           + I  P+A  + +A   + +++ QW+     +  ++ + D QR    K+   + A   ++
Sbjct: 132 QAIKEPQATPDLVAEHRVCELL-QWLANAGYVFRSNERADIQR----KVRLLIGAEPDKK 186

Query: 201 WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLN 260
           WS  D+A ++  SEA LRR   +  G    E  +D R+ LALSLL+    ++  +A  + 
Sbjct: 187 WSSQDIAESLALSEATLRRKLAK-EGNAFSEILVDVRMSLALSLLQSTDAAIASIAYQVG 245

Query: 261 FFDSFHFSKAFKHKFGYAPSAV 282
           +  +  FS  FK +FG++P+A+
Sbjct: 246 YESASRFSVRFKQRFGFSPTAI 267


>UniRef50_P43465 Raffinose operon transcriptional regulatory protein rafR n=9
           Tax=Lactobacillaceae RepID=RAFR_PEDPE
          Length = 277

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 13/235 (5%)

Query: 58  IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTP 116
           + +S+V  Y  +G G     N     L    I  L       Y  +    W+ +W+ F+ 
Sbjct: 36  VRDSYVIHYIQEGKGTFAAANHPATVLKAGDIFILPKGTPCFYQADNDQPWKYFWIGFSA 95

Query: 117 ----TSMMDIPVGQQSV----IYNGEIYNQELTEVAELITSPEAIKNNLAV-AFLTKIIY 167
                +M+   +  Q      + NG IY  +L+E+ +++  P ++ N++ + + + ++ Y
Sbjct: 96  GIRIEAMLSGSLLAQKCYLRQVQNGHIY-ADLSELYKVLHIPNSLINDVLLGSLIYRLFY 154

Query: 168 QWICLMYADGK--KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225
             +    AD    K     Q    ++ L  +     ++ D+   +  S ++L  LF  + 
Sbjct: 155 DLLRWYPADATNIKVKSTEQFNLAVSYLQENYSTGCTIMDLCHYLNLSRSYLYTLFKTHA 214

Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
             +P++     RL+ A   L    NSV  +A+ + + DSF FSKAFK   G +PS
Sbjct: 215 NTSPQKLLTKLRLEDAKQRLSTSNNSVQSIANMVGYKDSFTFSKAFKRYSGASPS 269


>UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype
           B' RepID=UPI00016C01F8
          Length = 265

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 58/100 (58%)

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
           P +  + KL+  +  +L+++ ++ ++A     +  +L  LF    G+TP EY  + +++ 
Sbjct: 157 PNQTVMGKLVKYIDENLERKITLTELAKFAHLNANYLCTLFSSTFGQTPIEYITNKKIEK 216

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           A  LL+   +++ E+++TL F   F+FS  FK + GY+PS
Sbjct: 217 AKILLRTTTDTIEEISNTLGFSSPFYFSAVFKKRIGYSPS 256


>UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales RepID=A6LD39_PARD8
          Length = 297

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 17/233 (7%)

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPT--- 117
           ++ +Y  +G G  +L +G++  +  N    L     H Y   E   W  YW  F      
Sbjct: 58  YLLIYCTKGEGWYVL-DGKRYVVPENHFFILPAEKPHQYGSSEHDPWYIYWAHFKGKKAK 116

Query: 118 -------SMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI 170
                   ++ I +   S I +   +  EL  V E  T  EA  N + ++F   I     
Sbjct: 117 YISDQLQGVIPIDMDDNSRIGDRIAFFDELLNVLESGTD-EATVNYVNLSFNHLIASFLY 175

Query: 171 CLMYADGKKDPQRRQIEKLIAT----LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226
              Y + K    + +    I+     +  +L+ + ++ ++A+    SE+++ RLF + TG
Sbjct: 176 VKTYREAKFSKSKAENTFFISLATHFMTENLENKLTLKELASHFGYSESYMYRLFFKETG 235

Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
             P  Y+L  ++D A  LL      + +VA  L F D ++FS+ FK   G +P
Sbjct: 236 YAPMNYFLHMKIDRACQLLLHTNMKINQVALKLGFDDPYYFSRIFKKIVGTSP 288


>UniRef50_B2JCG9 Transcriptional regulator, AraC family n=52 Tax=Burkholderia
           RepID=B2JCG9_BURP8
          Length = 350

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 4/136 (2%)

Query: 151 EAIKNNLAVAFL-TKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209
           E I + + V  L +    Q I  + A G++ P+   +   +  + A+++   +  ++A  
Sbjct: 189 ERIADTMGVGTLRSGEERQRIPFVTAPGERHPR---LNDALLLMEANIEDPLTSDEIAGL 245

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
           +  S   L RLF +Y G  P +YYL  RL  A + L++   SV +++    F  + HFS 
Sbjct: 246 VGVSRRQLERLFRQYLGSMPSKYYLGLRLAKARTQLQRTSKSVVQISLACGFSSAAHFSN 305

Query: 270 AFKHKFGYAPSAVLKN 285
           A++ +FG  P    +N
Sbjct: 306 AYRERFGVTPREERRN 321


>UniRef50_B9XCC3 Transcriptional regulator, AraC family n=1 Tax=bacterium Ellin514
           RepID=B9XCC3_9BACT
          Length = 339

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 158 AVAFLTKIIYQWICL--MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
           A+     ++YQ +    ++ D +K   + +++K+IA L  +L +   + ++   + CS  
Sbjct: 198 ALEIAAAVLYQPVLREELFCDRQKRLSQERVQKVIAILKENLSEPPPLEEIGRRVGCSHF 257

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           +L R+F +  GKT      D R++ A +LL+    +V EVA  + +    HFS AF  +F
Sbjct: 258 YLSRIFTQAMGKTISAQLRDLRMERAAALLRDGRMNVTEVALEVGYSSLSHFSTAFHQEF 317

Query: 276 GYAPS 280
           G  P 
Sbjct: 318 GCCPG 322


>UniRef50_C9YV93 Putative transcriptional regulator n=2 Tax=Streptomyces
           RepID=C9YV93_STRSW
          Length = 313

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%)

Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249
           +   HA   +RW+V  +A     S A   + F +  G  P  Y    R+D A +LL    
Sbjct: 215 LEAFHARPSKRWTVEALATESGVSRALFAKRFTKVMGSPPLTYVSGCRMDEAEALLSDTD 274

Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           +S+  +A ++ + D+F FS AFK + G +PSA
Sbjct: 275 SSIARIAKSVGYADAFGFSAAFKRRRGVSPSA 306


>UniRef50_C6JDE0 Putative uncharacterized protein n=1 Tax=Ruminococcus sp.
           5_1_39BFAA RepID=C6JDE0_9FIRM
          Length = 484

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 136 YNQELTEVAELITSP---EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIAT 192
           YNQ   E+A++I S    E + + L      K+I +  C+    G K      I++ +  
Sbjct: 333 YNQMEDEIADIIQSSYNREELYDKLE-----KMIIRMFCVEDYSGNKQKLALDIKEYLDH 387

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN-S 251
            + S+     +AD+   +P   A+LR +F     K+P EY  + RL+ A  +L Q+    
Sbjct: 388 NYKSVTGNKELADIFGFVP---AYLRDVFRSKYEKSPMEYLQELRLECARKMLAQELKLP 444

Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           V E+A  + F D+ + SK F+ KFG  PS
Sbjct: 445 VKEIARAVGFNDALYLSKVFRRKFGITPS 473


>UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
           1_7_47FAA RepID=C5EG90_9FIRM
          Length = 298

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           I K +  LH    +  S+ D+A     +  W    F  Y G +P+ Y L+ R+D A   L
Sbjct: 180 INKTVTYLHEHYNEPISIIDLAKENHLTPNWFNHCFQEYYGMSPQAYLLNIRIDKAKEFL 239

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
                S+ +VA    + D+F+FS+ FK K G +P    KN
Sbjct: 240 TNYMLSISDVALLTGYSDAFYFSRIFKRKTGLSPQQYRKN 279


>UniRef50_C1DME1 Transcriptional regulator AraC family n=1 Tax=Azotobacter
           vinelandii DJ RepID=C1DME1_AZOVD
          Length = 310

 Score = 60.5 bits (145), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 20/237 (8%)

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121
           +  +T+ G G +  +        G+ ++ L P D H Y  E G  WE +W+       + 
Sbjct: 60  IVQHTLAGEGDLRFEGRHHRLRAGDTMLVLVPHD-HCYWLETGGSWEFFWIAMYGKEALR 118

Query: 122 IPVG----QQSVIYNGEIYNQELTE-VAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
           +       +  V+   +   + L E VA LI SPE      +      ++     L+  D
Sbjct: 119 LQRALLDERGPVLRLSDKTIECLAENVAALIRSPELTAGRASALAYESLMALHDDLLVQD 178

Query: 177 GKKDPQRRQIEKLIAT-LHASLQ------------QRWSVADMAATIPCSEAWLRRLFLR 223
              D  R  +   I   +HA L+                VA +A     S +   RLF R
Sbjct: 179 VALDAARTGVIASIQNHIHACLRCEPDTLSPQAEDDELDVASLAQLAGLSRSHFSRLFAR 238

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
             G +P +Y L+ R+  A  LL+    SV  +A ++   D  +FSK F+H F  +PS
Sbjct: 239 TVGMSPAQYVLNERMKRAAHLLEATDLSVKAIALSVGIHDPNYFSKLFRHAFSLSPS 295


>UniRef50_Q1QTP1 Transcriptional regulator, AraC family with amidase-like domain n=1
           Tax=Chromohalobacter salexigens DSM 3043
           RepID=Q1QTP1_CHRSD
          Length = 324

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%)

Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249
           +A + A++++  +  ++A  +  S   L RLF +Y    P  YYL+ RL  A  LL+   
Sbjct: 227 VALMEANIEEPLTTHELAEHLGISRRQLERLFKKYLQAVPSRYYLELRLQQARRLLRDSD 286

Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            +VG++A    F    HFS A+++ FG +P
Sbjct: 287 QAVGDIALATGFSSGAHFSTAYRNHFGISP 316


>UniRef50_Q01W15 Transcriptional regulator, AraC family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q01W15_SOLUE
          Length = 327

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 9/147 (6%)

Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM------YADGKKDPQRRQIEKLIATL 193
           + E A      EA+   L+ A     + +++  +      +  G +DP    + K +  L
Sbjct: 169 VEEAASGRVGSEAMLAKLSEALFVDTLRRYVAGLPDQQVGWLAGARDPI---VGKSLGLL 225

Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253
           H+ +   W++AD+A  +  S + L   F RY  + P  Y    RL LA   L++    V 
Sbjct: 226 HSRVSHPWTIADLADEVGISRSALVERFTRYLSEPPMAYLTRWRLTLAARSLEKTSRGVA 285

Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPS 280
           E+A  + +     F++AFK +FG  P 
Sbjct: 286 EIAADVGYESEAAFNRAFKREFGSPPG 312


>UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=Clostridium hathewayi DSM
           13479 RepID=UPI0001C368B4
          Length = 289

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/230 (20%), Positives = 96/230 (41%), Gaps = 11/230 (4%)

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPTSMMDI- 122
           +Y   G  + +L NG  +T+    ++   P +   Y +      E +W+ FT     D+ 
Sbjct: 52  LYIASGKAEFVL-NGAAVTIPAGNMVLYGPGEYQQYTYLLEDRPEVFWVHFTGYEAADLL 110

Query: 123 -----PVGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
                 +    ++  G    Y      +   +  P  +  + +  +  +++      +  
Sbjct: 111 SRTGLSLEDFRILRTGCASRYQDLFLSMIRELQLPRPLSGDFSSLYFKELLLTVERQIAE 170

Query: 176 DGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
            GK  PQ ++++E  +   H +      ++D AA++  S  W  R F +Y G  P +Y  
Sbjct: 171 GGKNKPQIQKEMEHAVHFFHENFSADIDISDYAASLHMSTCWFIRSFKQYVGVPPLQYLT 230

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
             R++ A  LL+     V E+   + + +  +FS+ FK + G +P+A  K
Sbjct: 231 SIRINKAKELLESTDCPVSEIGSIIGYENPLYFSRIFKKQTGLSPAAYRK 280


>UniRef50_B4S2K8 Transcriptional regulator, AraC family protein n=3
           Tax=Alteromonadales RepID=B4S2K8_ALTMD
          Length = 284

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 12/228 (5%)

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM-----M 120
           Y++ G GK    +GE   LH   +I L              W+  W+    T        
Sbjct: 59  YSINGEGKFRTPSGE-FALHEGQLIVLPANQSFEVSIVSAKWDIIWVNLADTERWKAFEK 117

Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180
           D  V   +    G  +  EL  + E  +        +  ++L +II  +I   + + +K 
Sbjct: 118 DCAVVVDNAALEGLHHAMELLYL-EHDSENRRAATTIVSSYLCRIIDVYIGHTHPNDEK- 175

Query: 181 PQRRQIEKLIATLHA---SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
            +RRQI +L +   A    LQ  W +  ++     S   L RL L+  G++PK++ +  R
Sbjct: 176 -ERRQINRLNSLFSAVDKQLQFDWDMKSLSEKAHYSAPHLHRLCLQAFGRSPKQHVIHLR 234

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           +  A SLL      V  +A+ + + + F FSK FK   G +PSA   N
Sbjct: 235 MLRAKSLLLSTQWPVSYIANYVGYANVFTFSKRFKKSTGLSPSAFRCN 282


>UniRef50_D1W357 Transcriptional regulator, AraC family n=2 Tax=Bacteroidales
           RepID=D1W357_9BACT
          Length = 273

 Score = 60.1 bits (144), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 24/184 (13%)

Query: 114 FTPTSM---MDIPVGQQSVIYNGEIY-----NQELTEVAELITSPEAIKNNLAVAFLTKI 165
           F P +M   ++IP    S+ YN E+      N+ L E+A  I   E   N++ ++++ K 
Sbjct: 88  FHPHAMSMFLNIPT---SLFYNQEVSGYSLENKSLNELATRIFDCE--NNSICISYVEK- 141

Query: 166 IYQWICLMYADGKKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
              W+    AD   D   R  +I+  I  ++ + Q   SV ++++    S+    RLF  
Sbjct: 142 ---WLVSQIADNLADTTHRIKRIDAAIQRIYITPQ--ISVNELSSIASLSKKQFERLFHS 196

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGN---SVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           + G  PKEY    R   AL+ ++ Q     +  ++A T  + D  HF + FK   GY P 
Sbjct: 197 FVGINPKEYTRIVRFQKALAQMQHQAGKEINQAQIAYTSGYADQSHFIREFKKFCGYTPM 256

Query: 281 AVLK 284
           ++LK
Sbjct: 257 SLLK 260


>UniRef50_UPI0001789679 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001789679
          Length = 289

 Score = 60.1 bits (144), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%)

Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241
             R IE+ +  +  +L+Q  SV+ +A T   S+ +  RLF    G +  +Y L  RL+ A
Sbjct: 3   HHRIIEQALIHIEENLEQPLSVSSVALTFNMSKYYFHRLFSAMMGCSLNQYILSRRLNAA 62

Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282
           LSL+     S+ ++A  L F     F++AFK  +G APS++
Sbjct: 63  LSLIHNNNLSLTDIAYQLAFGTQASFTRAFKQHYGVAPSSL 103


>UniRef50_UPI0001788616 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788616
          Length = 297

 Score = 60.1 bits (144), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 17/242 (7%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYW 111
           +++P  + +++ +Y  +G G   L  G+  +L     + + P   H Y   E   W  YW
Sbjct: 51  RERPEGSGAYILIYCAEGEGWYRLNGGKTYSLLKGQAVVIPPDTPHEYASSEFHPWSIYW 110

Query: 112 --MEFTPTSMM-----------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158
             M+ T   ++            +PV Q   I   E++ +    + +  T    I  +  
Sbjct: 111 WHMKGTHAGLLFEGFTGAAEPAIVPVDQSRSIV--ELFQESYELLQKGYTLNHIIHVSQL 168

Query: 159 VAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218
              L  II +   L    G+    +  +E+ +  +   L+   S+ ++AA    S     
Sbjct: 169 AGHLAAII-RLARLQPQRGQHQHNKHDMEQTLRFMTEHLEGHVSLKELAAYANLSIPHFT 227

Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278
             F   TG +P +YYL  ++  A   L   G SV E++  L F D ++FS+ FK   G +
Sbjct: 228 FRFKEATGYSPIDYYLRLKIQRACQHLDLTGESVKEISHRLGFQDPYYFSRLFKKIMGKS 287

Query: 279 PS 280
           PS
Sbjct: 288 PS 289


>UniRef50_A7LRR5 Sensor protein n=2 Tax=Bacteroides RepID=A7LRR5_BACOV
          Length = 1333

 Score = 60.1 bits (144), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 179  KDPQRRQIEKLIATLHASLQQ-RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
            + P  + +E++I  ++ +L     SV  +A  I  S   L R     T +T   +  + R
Sbjct: 1219 QSPDEKLMERIIKVVNDNLSNTEISVKQIADEIGISTVHLNRKLKELTNQTSSRFIRNIR 1278

Query: 238  LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292
            L  A  LL ++ +S+ EV+D   F D  +FSK+FK  +G  P+A +K  +   TD
Sbjct: 1279 LQAAARLLAEKKHSIAEVSDLTGFSDPNYFSKSFKELYGMYPTAYMKENNPTETD 1333


>UniRef50_C6D094 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D094_PAESJ
          Length = 289

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%)

Query: 187 EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLK 246
           EK+  TL +S ++   +  +A T   S ++LR++FL++TG  PK+Y    R   A   L 
Sbjct: 177 EKIKQTLESSYKENLRIEQLAKTYSISPSYLRKVFLKHTGMGPKQYLDHIRNRQACDYLV 236

Query: 247 QQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
                + +VA    +++ +HFSK FK   G +PS
Sbjct: 237 FTDYPINQVAKLCGYYEEYHFSKMFKQHNGMSPS 270


>UniRef50_A8TQD3 Transcriptional regulator, AraC family protein n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8TQD3_9PROT
          Length = 325

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%)

Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241
           Q +QI   +  +HA  ++ W+V  +AA++  S +     F    G  P  Y  D RL  A
Sbjct: 201 QDQQIGGALQLIHAEPERSWTVESLAASVGMSRSRFAERFSDLMGAGPMSYLTDWRLQKA 260

Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           LSLL     SV +VA    +     F++AF  KFG AP+   ++ D
Sbjct: 261 LSLLDDARCSVQQVASRTGYQSPAAFTRAFTGKFGLAPTEYRRSPD 306


>UniRef50_Q1R055 Transcriptional regulator, AraC family with amidase-like domain n=2
           Tax=Chromohalobacter salexigens RepID=Q1R055_CHRSD
          Length = 341

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 51/97 (52%)

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
           R + + +A + A L Q   + ++      S+  L RLF+ + G+TPK+ YL  RLD A  
Sbjct: 237 RSVVRALAVMEAHLDQVLPMPEICRLAGQSQRQLTRLFVAHFGETPKQCYLGMRLDYARR 296

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           LL      V E A +  F    HFS+A++ +FG  PS
Sbjct: 297 LLADSRCRVTEAALSSGFVHLAHFSRAYQARFGERPS 333


>UniRef50_B4D0H6 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter
           flavus Ellin428 RepID=B4D0H6_9BACT
          Length = 282

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 13/219 (5%)

Query: 67  TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVG 125
            V+G G+ILL +G    L    +    P  ++++H   G  W   W+       +   VG
Sbjct: 66  AVEGEGRILL-DGRWQRLRAGELSMAPPRGLNAFHAVPGRRWVIAWVRCEEPPWIRPLVG 124

Query: 126 QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK--DPQR 183
             S +           E++ +I     ++N    A   ++++ WI L++   ++   P R
Sbjct: 125 AGSPVR----LRAGKGEMSRVIG---GLRNEWEGARDPRMVHHWIGLLHGLLQRFAQPWR 177

Query: 184 RQ--IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241
            Q  + +L   +     + W+++ +AA +  S   LRRL LR  G+TP +     R+  A
Sbjct: 178 GQERLWRLWEEVGREPAKPWTLSMLAARVHMSSEHLRRLCLRELGRTPVQQLTYLRIQRA 237

Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
             LL+   + +  +A  + +  +  FS+AFK   G  PS
Sbjct: 238 KDLLENSDDKLEAIAPAVGYVSALVFSRAFKRWVGCTPS 276


>UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacillaceae
           RepID=B1HZP2_LYSSC
          Length = 276

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 13/216 (6%)

Query: 78  NGEQITLHGNCIIFLKP-MDIHSYHCEGLVWE----QYWMEFTPTSMMDIPVGQQSVIYN 132
           NG    +    I+   P M I        VWE     Y +    T++  + V Q  +I  
Sbjct: 56  NGTPYVMEPGVIVHAGPQMPIEVNVTSQKVWEYAVVHYNLPMEETALYPL-VEQHFLIKT 114

Query: 133 GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI---CLMYADGKK-DPQRRQIEK 188
           G    Q +T+V +L+ S  +   N+AV F +K ++  +    L+ A  K  D     +E+
Sbjct: 115 GH-NTQIITQVQQLVES-YSFPGNMAV-FKSKTLFMNLLEHILIAAKVKVLDNANELMEQ 171

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
            +  +H    ++ SV+++++           LF ++TG  P +Y  + R+  A  LL+  
Sbjct: 172 ALQYIHEHYAEQISVSNISSEFDIERRRFAYLFEQHTGMNPSKYITEYRIRRAKDLLEYG 231

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           G  V E+A+ + + D F+FS+ FK   G +PSA  K
Sbjct: 232 GIPVAEIAECVGYVDCFYFSRVFKKCTGLSPSAYRK 267


>UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter
           fermentans DSM 18053 RepID=C6VUW2_DYAFD
          Length = 300

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 14/240 (5%)

Query: 51  RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD--IHSYHCEGLVWE 108
           R+++K    N  + +Y +QG G  ++ + ++  +  N  I L   D  I  +      W 
Sbjct: 53  RERRKGCEDN--ILIYCIQGKGHYVIGD-KKFEVSANQFILLPATDQYIRYWADHDDPWT 109

Query: 109 QYWMEFTPTSMMDIPVGQQSVIYNGEI---YNQELTEVAELITSPEAIKNNLAVAFLTKI 165
            YW+ FT   + +     Q     G +   +N++  ++   I     +  +L       +
Sbjct: 110 IYWVHFTGAGIDNFNQSLQIAPQKGPVDILFNEKTLDIWHRIYQSLEMGYSLENLANATM 169

Query: 166 IYQWICLMYADGKKDPQRRQIEKL------IATLHASLQQRWSVADMAATIPCSEAWLRR 219
              +   M+   +K       EK       I  +  +L Q+ SV DMA     S +    
Sbjct: 170 CLHYFTAMFLFPEKHLTTEGTEKTDLITETITHMRLNLDQKLSVEDMARQHQLSCSHFSM 229

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           LF + TG  P +Y++  ++  A  L+      + E+A +L + D F+FS+ FK   G +P
Sbjct: 230 LFRKGTGMAPVDYFIHLKMQKACQLIYANEGKIKEIAMSLGYDDPFYFSRVFKKNMGQSP 289


>UniRef50_B9NXI5 Transcriptional regulator, AraC family n=2 Tax=Rhodobacteraceae
           RepID=B9NXI5_9RHOB
          Length = 325

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 46/78 (58%)

Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263
           + +AA +  S   L RLF +Y   TPK+YY++ RLD A  LL Q  +S+ ++A    +  
Sbjct: 242 SSIAARLGISTRQLERLFGKYLNSTPKKYYVEMRLDRARKLLLQTEDSITDIAMACGYES 301

Query: 264 SFHFSKAFKHKFGYAPSA 281
             HF+K ++ +FG +P A
Sbjct: 302 PGHFAKVYRARFGVSPHA 319


>UniRef50_UPI0001C43064 probable transcriptional regulator n=1 Tax=Bacillus pseudofirmus
           OF4 RepID=UPI0001C43064
          Length = 253

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN-SVGEVADTLN 260
           +V+++A     + A   R F R+TG +PKE+    R+  A  L++++ + ++ EVAD   
Sbjct: 167 TVSELAKKANMTPASFSRAFKRHTGSSPKEFINSCRIKKAKELMREKKDITLKEVADLAG 226

Query: 261 FFDSFHFSKAFKHKFGYAPS 280
           F D F+FSK FK K G APS
Sbjct: 227 FQDEFYFSKLFKKKEGVAPS 246


>UniRef50_D0YX71 Transcriptional regulator AraC family protein n=1
           Tax=Photobacterium damselae subsp. damselae CIP 102761
           RepID=D0YX71_LISDA
          Length = 321

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 25/176 (14%)

Query: 132 NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-----------MYADGKKD 180
           N +++ Q L  VA+           L   FLT+ ++ +I L           +Y     +
Sbjct: 147 NFQLFQQSLPAVAD---------TRLEKTFLTQSLF-FILLALNEAGIDVFNVYRFNYDE 196

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
           P+ R I +LI       Q++WSV DMA  +  +++ LRR  L   G +  +  LD R+ L
Sbjct: 197 PKERTIARLIT---QDPQRKWSVDDMAKALFTTQSTLRR-HLAKEGVSFSQLLLDVRMGL 252

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPH 296
           AL+ L     S+ ++     F  + +F  AFK K+G  PS     + +H   ++ H
Sbjct: 253 ALNYLTFSNYSISQIGHRSGFGSAAYFCDAFKRKYGITPSQFRATSREHNDMSALH 308


>UniRef50_Q2RUD8 Transcriptional regulator, AraC family n=1 Tax=Rhodospirillum
           rubrum ATCC 11170 RepID=Q2RUD8_RHORT
          Length = 320

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 51/97 (52%)

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
           R + +++  L A L    S+ D+A     S A L R F R  GKT   +  D RL+ A  
Sbjct: 215 RPLARVLDRLMADLGNPPSLEDLARDAGMSHARLNRCFHRAYGKTVFAWLRDHRLERACR 274

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            L+Q G+S+ E+A    F  S HF+ AF+ +FG  P+
Sbjct: 275 YLRQDGHSITEIAFLCGFSSSSHFAAAFRQRFGCRPA 311


>UniRef50_B8DGU9 Transcriptional regulator, AraC family n=2 Tax=Firmicutes
           RepID=B8DGU9_LISMH
          Length = 142

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 60/103 (58%), Gaps = 2/103 (1%)

Query: 180 DPQRRQI--EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
           D Q++QI   ++I  +     +  S++ ++ T+  S A++ ++F   TG++P  Y +  R
Sbjct: 33  DEQQKQILVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIR 92

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           L  A  LLK +  +V + A+ + + D+++FSK FK  +G+ PS
Sbjct: 93  LTRAEELLKNKDVTVKQAANMVGYNDAYYFSKLFKKYYGFPPS 135


>UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales
           RepID=C5EK80_9FIRM
          Length = 291

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 18/246 (7%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQIT----LHGNCIIFLKPMDIHSYHCE-G 104
           P     P   N ++  Y + G G ++  + + +T    +       + P  +++Y  +  
Sbjct: 29  PLHSYGPYARNHYLFHYVISGAGTLMSTDSKGMTNTYHIKSGEGFLIHPKQVNTYSADRD 88

Query: 105 LVWEQYWMEFTPTSM----------MDIPVGQQSVI-YNGEIYNQELTEVAELITSPEAI 153
             WE  W+EF    +          MD PV   +    + E+ N+ L        SP  +
Sbjct: 89  HPWEYTWLEFDGLRVKEALELAGLTMDNPVYHSNARDLSLELKNEMLYIANHSDQSPFHL 148

Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
             +L + FL  +           G K  Q   I +  + +  + Q   SV D+AA    +
Sbjct: 149 IGHLYL-FLDYLTRSSSSRRMMRGGK-LQDFYIREATSFIEQNFQNDISVEDIAAFCNLN 206

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            ++  ++F    GK+P+E+ +  R+  A  LLK    ++ ++ + + +    HFS+AFK 
Sbjct: 207 RSYFGKIFRDAVGKSPQEFLISYRMTKAAELLKLTELTIKDIGNAVGYPSQLHFSRAFKK 266

Query: 274 KFGYAP 279
            +G +P
Sbjct: 267 TYGISP 272


>UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus
           halodurans RepID=Q9KAQ8_BACHD
          Length = 287

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 115/267 (43%), Gaps = 23/267 (8%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104
           Y   +P  K  P + + ++    ++G G      G+  +L      F+ P ++ +Y  + 
Sbjct: 25  YSQTFPYHKVGPQVHDYFLLHVVLRGKGSFHCA-GKTYSLSAGDSFFIYPKELVTYESDR 83

Query: 105 L-VWEQYWMEFT--------------PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITS 149
              W   W+ F               P S +    G+ S+I   +++    + + EL  +
Sbjct: 84  TDPWYYTWVAFQGPFFEETLRSAGIQPESPIVSLGGKGSMI--KQLFYDLYSSMTELKVA 141

Query: 150 PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ-IEKLIATLHASLQQRWSVADMAA 208
                N      +++ I Q   L     K+D Q  Q I+ +I  L     +  S+  +AA
Sbjct: 142 SSLKTNAYLRLIISEFIEQTTILDEHSQKEDHQLDQHIQDVIRLLSLRYFEPLSIETIAA 201

Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268
           +   +  +  + F  YTG +P +Y L+ R+  A +LL Q+  ++ EVA ++ + D  +FS
Sbjct: 202 SYGYNRTYFSKKFKEYTGYSPSKYLLNIRMKKAEALL-QKSLTIQEVASSVGYRDPLYFS 260

Query: 269 KAFKHKFGYAPSAVLKNTDQHPTDASP 295
           K FK   G APS   +   QH  ++ P
Sbjct: 261 KQFKQWSGVAPSVFRQ---QHLKESEP 284


>UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae
           RepID=C6BAA0_RHILS
          Length = 288

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%)

Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
           AD   +   R +++    L     Q  SV  +A  +  S  + RRLF   TG + K+Y +
Sbjct: 175 ADLNTNAVNRLVDRARMVLMERCGQPLSVEQLADELGVSYPYFRRLFREQTGMSAKQYQM 234

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
             RL  A+ LL     S+ E+A  L F  +FHFS  F+   G +P+
Sbjct: 235 RVRLQRAIDLLVNTDKSIKEIAGLLGFHSAFHFSTQFRQLIGSSPT 280


>UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6
          Length = 277

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 60/103 (58%), Gaps = 2/103 (1%)

Query: 180 DPQRRQ--IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
           D Q++Q  + ++I  +     +  S++ ++ T+  S A++ ++F   TG++P  Y +  R
Sbjct: 168 DEQQKQLLVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIR 227

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           L  A  LLK +  +V + A+ + + D+++FSK FK  +G+ PS
Sbjct: 228 LSRAEELLKNKNITVKQAANMVGYNDAYYFSKLFKKYYGFPPS 270


>UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius
           subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE
          Length = 288

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 108/245 (44%), Gaps = 30/245 (12%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114
           P + +++V  + V G GK  + +G    L    +  L    +  Y  +G   W   W+ F
Sbjct: 46  PTVRDNYVLHFIVDGKGKFTI-DGITTQLKTGDMFILPKGKVAFYQADGEHPWTYLWVGF 104

Query: 115 TPTSMMDIPVGQQ-----------------SVIYNGEIYNQELTEVAELITSPEAIKNNL 157
           + +   +I    Q                  ++   +  +Q+L +V EL  + E  K   
Sbjct: 105 SGSKAENILSKTQLLDHYFCHSTLESKVLDQIVKLTQFRDQKLDDVTELQLTAELYK--- 161

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
            +AFL K   ++     +D     Q   +Q++K+I   H        ++++A  +  + +
Sbjct: 162 LLAFLMK---EFPSKAMSDSSILIQNYIKQVKKII---HTQYGNPLKISEIAKKLNLNRS 215

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           +L ++F   T  + K+Y +  R++ +  LL +    + E+A+ + F D+  FSKAFK  F
Sbjct: 216 YLYKIFKEETDYSLKDYLIQIRMEKSADLLTRTTFHISEIANAVGFPDALAFSKAFKKHF 275

Query: 276 GYAPS 280
           G +PS
Sbjct: 276 GQSPS 280


>UniRef50_C9A3L0 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2
           RepID=C9A3L0_ENTGA
          Length = 234

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
            + K I  +H +L Q   + D+A  +  +E +   LF +  G  P +Y    ++ +A SL
Sbjct: 131 HVVKAIQYIHTNLYQPLRIKDIADQLGINERYFSTLFSKEVGMPPSKYVQKQKIKIAKSL 190

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           L  Q  S+ ++++ L+F D+ HF K FK+  G +PS   +NT
Sbjct: 191 LASQDLSITDISNLLHFSDTPHFCKVFKYLTGVSPSK-FRNT 231


>UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM
           17135 RepID=B5CXD1_9BACE
          Length = 293

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 43/293 (14%)

Query: 12  NETPYNIP----LLINENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVAVY 66
           NE    IP    L I EN ++  +    + ++  A+ HYR    R +  P      + +Y
Sbjct: 10  NEKAIVIPQENLLRIKENPMTRLLHPTDVGYYPCAEGHYR---ERTEGSP----QHILIY 62

Query: 67  TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVG 125
             +G G   +  G + T+  N    ++    H Y       W  YW+ FT         G
Sbjct: 63  CHEGEGWYNIGKG-KCTVKKNDFFIIEAGTPHVYAASTSHPWSIYWIHFT---------G 112

Query: 126 QQSVIYNGEIYNQEL-------TEVAELITSPEAIKNNLAVAF-LTKIIYQWICLMYADG 177
           +QS +++ E++N+ +           + I     I  NL + + +  + Y  +CL Y  G
Sbjct: 113 EQSHLFS-ELFNRTIYIDDSPTARFNDRIQLFNEILVNLEMGYSIENLEYITLCLWYLLG 171

Query: 178 --KKDPQRRQI---------EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226
             +  PQ R+I         +K+I  + A+L ++ ++ DMA ++  S  +L  LF + +G
Sbjct: 172 SFRYIPQFREINKPKTQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSG 231

Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            +P  Y+   ++  A  LL        E+A  L F D ++FSK F      +P
Sbjct: 232 MSPINYFNQLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSP 284


>UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS family) protein n=1
           Tax=Paenibacillus larvae subsp. larvae BRL-230010
           RepID=UPI0001692C08
          Length = 288

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 109/246 (44%), Gaps = 17/246 (6%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWE 108
           P  +  P + + ++  + + G G I +  G+++ L       ++P ++  Y  + +  W 
Sbjct: 32  PGHQIGPRLCDYYLMHHVISGKG-IFMYRGKELELKAGDTFLIEPEELVRYEADQVNPWM 90

Query: 109 QYWMEF----TPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIK----NNLAVA 160
             W+ F     P ++          I +    NQ ++E+   I S    K    +  A+ 
Sbjct: 91  YRWVAFQGKGVPEALEKTGFSSSRCIVHTRD-NQNVSELFSTILSVLQDKKEGAHQKALG 149

Query: 161 FLTKIIYQWICLMYAD---GKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
           +L  +  +    +Y     G +      R ++K I  L     +  S+  MA  +  + A
Sbjct: 150 YLYVLFGELCEAIYPKTGIGMRTSSESGRTVQKAIHYLSTQYAEDISIETMADNLGYNRA 209

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN-SVGEVADTLNFFDSFHFSKAFKHK 274
           +L R+F + TG TP  + L  R+D A  LL+Q+   ++ ++A ++ F D  +FSK FK  
Sbjct: 210 YLSRIFKQETGLTPVTFLLKLRIDKARFLLRQRMELTIEQIASSVGFHDPLYFSKQFKRF 269

Query: 275 FGYAPS 280
           +  AP+
Sbjct: 270 YKCAPT 275


>UniRef50_B6QZZ9 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp.
           JE062 RepID=B6QZZ9_9RHOB
          Length = 289

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 24/248 (9%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEF 114
           +P   +++V    +QGC +   + GEQI      ++F+ P ++H    EG  +  Y M +
Sbjct: 45  EPHTHDTFVVGGILQGC-QCYWQRGEQIFAGPGDLVFVNPFELHDGIPEGYGY-TYRMTY 102

Query: 115 TPTSMM--------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166
              S++        D P           +++ EL +  E I + ++I+N        + +
Sbjct: 103 PSISLLQKIAEDLTDKPQSGTPYFPEACVHDPELCQ--EFIAAHKSIQNRSIDLEAEEPL 160

Query: 167 YQWICLMYAD---------GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
           Y     M A            KDP    + +    L  S      + D+      S+  L
Sbjct: 161 YMIFAKMLAKYGSFRESDMNSKDPV--AVRRAREYLEESFMGNVHLDDLVNISGRSKYHL 218

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
            R F + TG+TP  Y  D R+  A  LL  +G S  E A    F D  H ++ FK + G 
Sbjct: 219 IRSFKKATGQTPHAYLTDVRVRNARRLLV-RGTSPSETASLCGFADQAHLTRQFKSRVGT 277

Query: 278 APSAVLKN 285
            P+A  ++
Sbjct: 278 TPAAFQRS 285


>UniRef50_B9Y348 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM
           12042 RepID=B9Y348_9FIRM
          Length = 297

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 61/110 (55%)

Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
           ++P  R ++ ++ T+H    Q+ ++A +AA+    ++   +LF+R+  +TP  Y    RL
Sbjct: 184 ENPDLRCLKVMVGTIHLRFAQKLTLAQIAASGAVGQSKCCKLFMRFLNQTPMAYVNQYRL 243

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
             +L LL+    SV E+A  + F  + ++++AF+  F  +P+   K  ++
Sbjct: 244 YQSLELLRNTAMSVTEIALAVGFGSASYYAEAFRKGFDQSPTQYRKEHNR 293


>UniRef50_Q1MGU4 Putative AraC family transcriptional regulator n=1 Tax=Rhizobium
           leguminosarum bv. viciae 3841 RepID=Q1MGU4_RHIL3
          Length = 314

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 50/104 (48%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           +I + +  +H    +RW+V D+A     S +     F     + P  Y+   RL LAL L
Sbjct: 209 RISRALKAIHDEPYRRWTVLDLARVAGLSRSGFAARFTALVKEAPLSYHSRWRLTLALGL 268

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           ++Q    VG VA  + +     FS+AFK +FG+AP      T Q
Sbjct: 269 MRQPDAKVGSVARQVGYDSEAAFSRAFKAQFGFAPMNAKSTTIQ 312


>UniRef50_A4Z280 Putative transcriptional regulator, AraC family n=1
           Tax=Bradyrhizobium sp. ORS278 RepID=A4Z280_BRASO
          Length = 304

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 54/97 (55%)

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
           R++ +L+    + L +  SVAD+AA +  S   L  LF R  G +P  + +  R++ A +
Sbjct: 200 RRLRQLVDYFDSRLGESLSVADLAAFLDLSVPHLTELFRRGLGSSPYRWMMQRRIERARA 259

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           LL ++ +S+ ++A  L F  S HF+ AF+   G  PS
Sbjct: 260 LLAERDHSITDIALALGFASSQHFATAFRKACGLTPS 296


>UniRef50_D1N1T4 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N1T4_9BACT
          Length = 302

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%)

Query: 201 WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLN 260
           WS   MA    CS   L RLF +Y   TP++Y L+ R+  A  LL  +  SV E++  + 
Sbjct: 213 WSQHRMAGRCGCSCTHLVRLFRKYFDTTPRQYLLELRMRRAKQLLADEKLSVKEISARVG 272

Query: 261 FFDSFHFSKAFKHKFGYAPSAVLKN 285
           + ++ +FS  F+ +FG +PS   K 
Sbjct: 273 YDNALNFSTGFRKRFGISPSEYRKQ 297


>UniRef50_C6C8M9 Transcriptional regulator, AraC family n=44 Tax=Gammaproteobacteria
           RepID=C6C8M9_DICDC
          Length = 322

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           + ++ A + A L +  ++ D+AA    SE    R+F +  G  P +Y +  RL  A  LL
Sbjct: 220 LRRVQARIDAGLAEGLTIGDLAAEAGLSEFHFARMFRQSVGMAPHQYVMKRRLAQAKDLL 279

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           +Q   S+ +VA    F  + HFS+ F+ +FG  PS + + 
Sbjct: 280 RQSRLSITDVALACGFSSASHFSQRFRAEFGVTPSTLRRQ 319


>UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
           15053 RepID=C0C0R7_9CLOT
          Length = 322

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 118/263 (44%), Gaps = 27/263 (10%)

Query: 46  RVIWPRD-----------KKKPLIANSWVAVYTVQGCGKILLKNGEQITLH-GNCIIFLK 93
           R I+P D           +++   A  ++ +Y  +G G I +   E  T H G    F  
Sbjct: 61  RTIYPTDVGFFPRARAHYREREDGAQQYILIYCTEGKGCIEV---EDRTYHIGRSDAFCI 117

Query: 94  PMDI-HSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIY-NGEIYNQELTEVAELITSP 150
           P    H Y+ +    W   W  F     +  P+ +  V++ N    +  +  + +L+   
Sbjct: 118 PKGRRHKYYADPEDPWSILWAHFKGEVTLCYPLEECRVVHMNSRQSDNRMMVLFKLLFR- 176

Query: 151 EAIKNNLAVA---FLTKIIYQWICLMYADGKKDP---QRRQIEKLIATLHASLQQRWSVA 204
             ++ N  +    ++++++   +  +Y   K D    Q R +  +I  ++ +L++  ++ 
Sbjct: 177 -VLERNYTLGNFIYISQVLSLILSEIYFREKTDESTVQDRHVTMVIRFMYENLKRSLTLE 235

Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264
           +++  +  S ++L  +F   TG++P E+++  ++  A  LLK     + EV+  L + D 
Sbjct: 236 EISEEVKLSRSYLNTIFKTQTGRSPVEFFIHLKMQEACKLLKATDMYIYEVSSELGYEDQ 295

Query: 265 FHFSKAFKHKFGYAPSAVLKNTD 287
           ++FS+ FK   G +P    KN D
Sbjct: 296 YYFSRIFKKVVGVSPRD-YKNGD 317


>UniRef50_D1NAQ6 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1NAQ6_9BACT
          Length = 246

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 8/227 (3%)

Query: 57  LIANSW-VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFT 115
           L  + W + V+   G G ++  NGE++ L       L P       CE  V  Q ++ F 
Sbjct: 18  LTGHHWRLYVHDAPGAGVVV--NGEKLELSPGFAWLLPPHGDLPAWCENPVLNQLYLHFE 75

Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
              +        S +    +      E+ E + S        A A     + +     + 
Sbjct: 76  VARLTGSRRTPASAVPLDPVLTVLARELKEQLDSQAPALILTATALAAAALARLPGDAWD 135

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS-EAWLRRLFLRYTGKTPKEYYL 234
           +   D   R+IE+L  +L  +L Q  +V D+A  +     A++RR F   TG TP +Y  
Sbjct: 136 ELGPD---REIEELCESLRHTLAQELTVTDLARRLGMPVNAFIRR-FQAGTGSTPYQYLT 191

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           + R   A  LL++   S+ ++ + +   D FHFS+ FK   G +P+A
Sbjct: 192 NLRYTRAARLLEEGELSIDDICEAVGVKDRFHFSRMFKRLHGLSPAA 238


>UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter
           RepID=C9Y4M3_CROTZ
          Length = 289

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 21/244 (8%)

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGL----VWEQYWMEFTP 116
           W  V    G G  +  NG+  TL G  + F++  D H Y H E L    V  +    F+ 
Sbjct: 47  WEIVIVEHGTGTHVF-NGQPYTLSGGSVCFVRDHDRHLYEHTENLCLTNVLYRSPQAFSF 105

Query: 117 TSMMDIPVGQQSVIY---NGEIYNQELTEVAELITSPEAIK---NNLAVAFLTKIIYQWI 170
            S ++  + Q+   +   +  +  Q L + + L+   EA++   +  AVA +  +  Q +
Sbjct: 106 LSGLEKLLPQEQDGHYPSHWRVSQQTLHQASPLVERLEALRECSDVHAVASMEMLFMQLL 165

Query: 171 CL------MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
            L      M   G  D    ++ +LIA L     +      +A     S   L R   + 
Sbjct: 166 ILLRSGSQMQGGGHAD---ERLNQLIAWLEDHYAEEVCWEQLADKHMLSLRTLHRQLKQR 222

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           TG TP+ Y    RL  A  LL+    SV ++A    F DS HFS  F+ +F ++P  + +
Sbjct: 223 TGLTPQRYLNRLRLMKARYLLRHSEESVTDIAYQCGFGDSNHFSTLFRREFSWSPRDIRQ 282

Query: 285 NTDQ 288
             D+
Sbjct: 283 GRDE 286


>UniRef50_A1WQ59 Transcriptional regulator, AraC family with amidase-like domain n=1
           Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQ59_VEREI
          Length = 401

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
           P  + + +  A + A +++   +A++A  +  S   L RLF RY    P +YY++ RL  
Sbjct: 227 PGYQHLTEAAALMAARIEEPLPLAELARAVALSLRQLERLFHRYFSMNPAQYYMNLRLHR 286

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPH 296
           A  LL      + ++     F  S HF KA++  FG++PS   +   +H   A PH
Sbjct: 287 AQELLTHSSLRIMQITVACGFQSSSHFCKAYRSLFGHSPS---EERRRHIGGAKPH 339


>UniRef50_Q98JA7 Probable transcriptional regulator n=1 Tax=Mesorhizobium loti
           RepID=Q98JA7_RHILO
          Length = 326

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 53/97 (54%)

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
           R +++ +  + ++LQ+  SVA++A  + CS   L RLF    G  P   YL  R+  A S
Sbjct: 215 RSVKRALLLMESNLQETLSVAEIATRLNCSRRQLERLFGTELGIGPMAAYLALRVHHAKS 274

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           LL+     +G++A    F ++ HFS+ F+ + G  P+
Sbjct: 275 LLEGSDLQIGDIAYRCGFTNAGHFSRVFRQQTGITPT 311


>UniRef50_D1N4A3 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N4A3_9BACT
          Length = 273

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 22/229 (9%)

Query: 65  VYTVQGCGKILLKNGEQITLH-GNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIP 123
            Y ++G G+ +   G +I    G+ +I +  +  H +H  G   ++Y+    P       
Sbjct: 49  TYILRGTGQYITATGRKIPYGPGSLMIRMPGVLHHQFHDAGEYVDKYFA--IPAPFFQAL 106

Query: 124 VGQQSVIYNGEIYNQEL------------TEVAELITSPEAIKNNLAVAFLTKIIYQWIC 171
           + Q+ +  +  + +  L             E+A       A+       FLT+I+     
Sbjct: 107 LEQKLLSPDRPVIDAGLHSWLVARFDGLADELAARGERELALSMGSCFGFLTEILLSVTV 166

Query: 172 LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
                  ++P   +I +  + L  +L QR S A++AA +  +    RRLF  + G +P E
Sbjct: 167 -------REPHYAEIREGASLLEQNLGQRISPAEVAAKVGMTYPNFRRLFTLHLGISPAE 219

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           Y +  R++   SLLK     + E+A T  + D + FS+ F    G  P 
Sbjct: 220 YRIRRRIEKIQSLLKSSELPLKEIAATFGYADIYTFSRQFSRYAGMPPG 268


>UniRef50_B5JKR9 Transcriptional regulator, AraC family protein n=1
           Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKR9_9BACT
          Length = 273

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%)

Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261
           S+A++A     S A+L RLF R++ +TPK Y    +++ A   L +    V + A  + +
Sbjct: 182 SLAEVATACGVSAAYLSRLFARFSNETPKAYLDRMKMNYAAQKLLRGNLQVKQAAAEVGY 241

Query: 262 FDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
            D FHFS+ FK  FG  PS   K   Q
Sbjct: 242 ADVFHFSRVFKKCFGVPPSTFAKRAGQ 268


>UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter
           fermentans DSM 18053 RepID=C6VXI4_DYAFD
          Length = 298

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 22/251 (8%)

Query: 54  KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWM 112
           ++P   +  + +Y   G G I L  G Q+ +    +I L     H+Y  +    W  YWM
Sbjct: 49  QRPNGISQAILLYCTDGQGWIEL-GGNQLHVRAGEVILLPTELPHAYGADTQNPWSIYWM 107

Query: 113 EFTP-------TSMMDIPVGQQSVIYNG--EIYNQELTEVAELI----TSPEAIKNNLAV 159
                       ++MD        ++ G  +  N   T +A  +    ++   ++ NLA+
Sbjct: 108 HIAGDHSDAAVAAVMDRDGEPARAVHVGFSDERNALFTHIASTLLKGYSASNLLQANLAL 167

Query: 160 A-FLTKIIY--QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216
             +L+  I    +     + G   P     EK I  +  +L    S+ ++A ++  S ++
Sbjct: 168 PHYLSSFIAPEHFGAQKPSAGAGSP----TEKAILYMQENLSNSLSLDNIARSVNLSVSF 223

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
             R F + TG  P EY+   R+  A  LL      + EVA  +   D F+FS+ FK + G
Sbjct: 224 FSRRFKKDTGYAPIEYFNYLRIQKACQLLHFSTWRINEVASAIGIDDPFYFSRLFKQQMG 283

Query: 277 YAPSAVLKNTD 287
            +P+   KN D
Sbjct: 284 LSPAHYRKNKD 294


>UniRef50_C5RDR5 Transcriptional regulator, AraC family n=2 Tax=Clostridium
           RepID=C5RDR5_CLOCL
          Length = 294

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 52/96 (54%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           +IEK+IA +H +  ++ ++A++A     SE+   R F + T   P EY ++ R++ A  L
Sbjct: 190 EIEKVIAYMHQNFGKKLTIANLALVANMSESHFIRTFKQETKLAPIEYLINLRINKAKKL 249

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           L+ +  +V E+A    F  S HFS  F  +    PS
Sbjct: 250 LRSKSKTVTEIALQCGFNSSSHFSSCFTKQLDCTPS 285


>UniRef50_C0DSD5 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC
           23834 RepID=C0DSD5_EIKCO
          Length = 302

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 86/214 (40%), Gaps = 37/214 (17%)

Query: 84  LHGNCIIFLKPMDIHSYHCEG----LVWEQY--------WMEFTPTSMMDIPVGQQSVIY 131
           LHGN ++ +K        C G    L+  QY        W+      ++ +P  +Q+   
Sbjct: 92  LHGNGVLAVK-------DCGGNRLQLLCGQYRYTRHAALWLGMPECLLLPLPEMRQTA-- 142

Query: 132 NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ-RRQIE--K 188
                +  L E   L      + N L+   L  ++ +     Y     DP    Q+E  +
Sbjct: 143 -----SMMLDEAERLRYGSGTVVNALSQVMLVAVLRR-----YRQQSSDPSFLSQLEDPR 192

Query: 189 LIATLHASL---QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           L   L A L   Q+ WS+A MA     S A L RLF    G++P  + L  RL  A   L
Sbjct: 193 LSGLLQAVLLAPQEDWSIARMAEMAKLSRAQLMRLFKSVIGESPHRFVLSIRLQQAAVQL 252

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
               +++  +A    F    HF++AFK  FG  P
Sbjct: 253 AASADTILRIALENGFVSESHFNRAFKQYFGQTP 286


>UniRef50_A8IE82 Transcriptional regulator n=3 Tax=Alphaproteobacteria
           RepID=A8IE82_AZOC5
          Length = 413

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 51/100 (51%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           ++ + +  +  +L +  SVA++A  +  S   L RLF     +TP+E YL  RL     +
Sbjct: 295 RVSRALLLMEQNLAEPLSVAEIARRLAVSPRQLERLFAERLAETPQESYLALRLRHGRWM 354

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           L     S  ++A  L F D  HF +AFK +FG  P+A  K
Sbjct: 355 LANTVFSAAQIAAELGFADGSHFGRAFKGRFGETPAAFRK 394


>UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=Colwellia
           psychrerythraea 34H RepID=Q488V5_COLP3
          Length = 290

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 8/225 (3%)

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMD 121
           + +Y   G G  L   G+   ++   I +L     HSY   + L W  YW+ F  T   D
Sbjct: 60  ILIYCTAGSG-FLTMAGKTTEINSGDIFYLPAGSQHSYQASKELPWTLYWLHFDGTLAND 118

Query: 122 IPVGQQSVIYNGEIYNQ-ELTEVAELITSPEAIKNNLAV----AFLTKIIYQWICLMYAD 176
                  V     I  Q  +  V + I+      +NLA         + +  +I L+   
Sbjct: 119 FCQHINIVERKFTIGVQPRVIRVFDGISHLRHSSHNLAEFIQGGHQVQALLSYIALLVQQ 178

Query: 177 GKKDP-QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
            K         E L A +   +  +  +  +A     S+    + F + TG++P  Y+++
Sbjct: 179 RKPSAINTFDTENLRAMMQEHIHSKLDLDSLAEAAKLSKYHFSKKFKQVTGESPISYFIN 238

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            ++  A  LL     SV  VA  L + D+++FS+ FK   G AP+
Sbjct: 239 MKMQRACYLLDSTPRSVKHVASELGYHDTYYFSRLFKKNIGMAPA 283


>UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 Tax=Lactobacillus
           RepID=A8YXG2_LACH4
          Length = 274

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 4/150 (2%)

Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG---KKDPQRRQIEKLIATLHAS 196
           L E+ E++   +++  NL +A LT   + ++   + +    +K P+  Q +  I  L  +
Sbjct: 125 LLELYEMLNKRKSLLTNLKIASLTSQFFYYLVKEFPNHPPVRKTPKNDQYQIAINYLQKN 184

Query: 197 LQQ-RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
                 ++ ++   +  S ++L  LF   T  +P++Y +  R++ A   L+   +++ E+
Sbjct: 185 YTDPNCNIVELCNRLGVSRSFLYSLFRENTNISPQKYLMQLRMEAAKKELQNTTSNLKEI 244

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           A  + + D F FSKAFK   G +P+   +N
Sbjct: 245 AHKVGYGDEFTFSKAFKRYSGVSPNVFRRN 274


>UniRef50_D2PPT5 Transcriptional regulator, AraC family n=1 Tax=Kribbella flavida
           DSM 17836 RepID=D2PPT5_9ACTO
          Length = 296

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           +  ++  LH +    W++A +A     S   L R F    G+ P  Y  + R+ LA  LL
Sbjct: 194 VGPVLQALHDAPAAPWTLASLAGVAGVSRTTLARRFTDLIGEPPLTYLTELRMTLATQLL 253

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            +   +V  VA  + + D+F FS AFK + G +PS  L +
Sbjct: 254 AEPDATVARVARRVGYADAFSFSAAFKRERGVSPSTYLTS 293


>UniRef50_B9TGZ7 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9TGZ7_RICCO
          Length = 164

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%)

Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257
            +R ++AD A  +  SE  L R F +  G TP  Y  + R+D A  LLK+    +G+VA+
Sbjct: 64  HRRITLADAANHLMVSERTLIRHFNKKLGMTPHTYLQNVRIDAAKILLKETNLILGKVAE 123

Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292
              +FD  +F + F+   G +P+   K   +H TD
Sbjct: 124 RTGYFDVTYFKRVFRETVGVSPTVFRKTPRRHITD 158


>UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=Clostridium
           perfringens RepID=B1BNT9_CLOPE
          Length = 285

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 55/95 (57%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           I + +  +  +  +  SV D++     S+++  R+F ++   TP+E+ +  ++  A +LL
Sbjct: 180 IREALNFIEENYNRNISVEDVSNRCNLSKSYFTRIFKKHMNTTPQEFLIQYKMLQACNLL 239

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           K +  S+ +VA+ L + + F+FS AFK KF  +PS
Sbjct: 240 KDKSLSISQVAELLGYSNQFNFSVAFKKKFNLSPS 274


>UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG84_SANKS
          Length = 297

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 11/236 (4%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT 117
           A   V +    G G      G ++   G+ ++ L   + H Y  +    W  +W      
Sbjct: 64  AEQHVVLVCTDGAGWCRTPAGTEVVGRGDAVLLLA-GEAHEYGADAEDPWTLWWFHVLGG 122

Query: 118 SMMD-IPVGQQSVIYNGEIYN-QELTEVAELITSP-EAIKNNLAVAFL--TKIIYQWICL 172
              + +  G Q+    G + + ++   VA L++   + +        L  T   +  +  
Sbjct: 123 DAAELVSAGHQA--SGGPVAHLRDAAPVASLVSQVIDGLDAGTRAGTLQATGAAFHALTQ 180

Query: 173 MYADGKKDP--QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
           + A G++ P      +E+ +  L A+  +R  VA +AA +  S + L  LF  + G +P 
Sbjct: 181 VVATGRRSPGPSLSPVERALEHLRATSPRRTPVASLAAMVGLSTSRLGALFREHVGVSPN 240

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            Y    R+  A  LL     +V  VA    F D  +FS+ F    G APSA    T
Sbjct: 241 AYQSQLRMARARELLDSTDLAVAAVASACGFDDPLYFSRQFARVHGVAPSAYRGRT 296


>UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium
           RepID=A6LR84_CLOB8
          Length = 285

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 52/96 (54%)

Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247
           K+   +H++  ++ S  +++     S  +  R+F + TGKT  EY  + RL  ++ LLK 
Sbjct: 189 KVFEFVHSNFNKKISTLNLSNIAHVSPYYFCRIFKQITGKTTTEYINEVRLKKSIELLKN 248

Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
              ++ EVA    F D  +FS+ FK K+G +P+  +
Sbjct: 249 SNMNITEVAINCGFNDVNYFSRLFKKKYGVSPTKFI 284


>UniRef50_Q1YY61 Hypothetical transcriptional regulator, AraC/XylS family protein
           n=2 Tax=Photobacterium profundum RepID=Q1YY61_PHOPR
          Length = 264

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
           + + +L     A L Q+ S+ D+A     S + L R F + TG TP  +    RL+ A++
Sbjct: 166 KDLRQLRDYFMAHLDQKISLNDLAILCDLSPSQLLRQFKKTTGITPYAWLARLRLEHAMA 225

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282
           LL+   NS  EVA  + F+D  HF+  FK  FG APS +
Sbjct: 226 LLRAGFNST-EVAYHVGFYDQAHFANTFKQTFGIAPSLI 263


>UniRef50_A3YAS0 Transcriptional regulator, AraC family protein n=1 Tax=Marinomonas
           sp. MED121 RepID=A3YAS0_9GAMM
          Length = 309

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 11/112 (9%)

Query: 180 DPQRRQIE-----------KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
           +PQRR ++           + +  +  ++++   +A++A  I  S+  L RLF R+  +T
Sbjct: 195 EPQRRSLQLRLDSRNPNLLEAVQLMEQNIEEPLLIAELAEHIGISDRELERLFKRHLAQT 254

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           PK +Y   RL+ A  +L+Q  +SV  VA    F    HFS+ ++ +F   PS
Sbjct: 255 PKAFYRQLRLEKARWMLQQTKDSVTSVATACGFVSLSHFSRCYQAQFSKLPS 306


>UniRef50_C9P3F6 Signal transduction histidine kinase n=2 Tax=Vibrio
            RepID=C9P3F6_VIBME
          Length = 1106

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 3/97 (3%)

Query: 184  RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
            R++  ++A  +A  +  ++ +D+A  +  SE  L+R     TGKT KEY  + RL+ A S
Sbjct: 1006 RKLNHIVAERYADAE--FTTSDIAKRMYLSERSLQRRMKYLTGKTFKEYLTEYRLEQACS 1063

Query: 244  LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            LL   G  V +VA    F D  +FS+ FKH++G +PS
Sbjct: 1064 LL-MSGEKVAQVAFLCGFNDPSYFSQRFKHQYGLSPS 1099


>UniRef50_B1M000 Transcriptional regulator, AraC family n=7 Tax=Methylobacterium
           RepID=B1M000_METRJ
          Length = 344

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 47/80 (58%)

Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264
           ++A ++  S+  L RLFL+Y G++P ++YL  RL+ A  L++Q    +  +A    F  +
Sbjct: 243 ELADSVRLSKRQLERLFLKYLGRSPAKHYLRIRLEHARHLIRQTAMPLLSIAIECGFASA 302

Query: 265 FHFSKAFKHKFGYAPSAVLK 284
            HFSKA+   FG  PSA  K
Sbjct: 303 SHFSKAYVDHFGRPPSAERK 322


>UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA
           RepID=C5EHH5_9FIRM
          Length = 302

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 10/164 (6%)

Query: 120 MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI----KNNLAVAFLTKIIYQWICLMYA 175
           MD+PV +   + N  +  + L+ +  + T  ++I    + N+   F  ++  Q       
Sbjct: 137 MDLPVVR--AMSNHTLLRELLSRIYHIRTDTDSINFWAEKNILQQFFCEVALQ----NKK 190

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
            G++D   R++ K+I  +     +  ++  + +T+  S +++ +LF  YT  +P  Y   
Sbjct: 191 AGQEDMNTRRLNKIIHYIKKYYMEPITLDSLCSTVNLSPSYIIKLFNHYTSLSPMAYVNR 250

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            R++ A  +L +   SV ++A    F DSF+FSK FK   G  P
Sbjct: 251 VRIEAAREMLAETPLSVSDIAAQTGFKDSFYFSKKFKAVTGITP 294


>UniRef50_B5GM94 Helix-turn-helix domain-containing protein n=1 Tax=Streptomyces
           clavuligerus ATCC 27064 RepID=B5GM94_STRCL
          Length = 324

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           +   +  +H + ++ W++A +A     S   L + F R  G+ P  Y  D R+ LA  LL
Sbjct: 188 VGPALRAMHDAPERPWTLAALATASGVSRTTLAQRFTRLVGRPPLTYLTDWRMALAADLL 247

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            +   ++  VA  + + D+F FS AFK   G +PSA   N
Sbjct: 248 TESTATLAAVARQVGYADAFGFSAAFKRVHGVSPSAYRDN 287


>UniRef50_A7JVV0 Possible AraC family transcriptional regulator n=2 Tax=Mannheimia
           haemolytica RepID=A7JVV0_PASHA
          Length = 298

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 7/135 (5%)

Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGK-----KDPQRRQIEKLIATLHASLQQRWSVAD 205
           +++ N+LAV  LT I+ +   L+  + +     K  Q   +  LI  +  + +  W V D
Sbjct: 159 KSVVNSLAVVILTMILREH--LVNHNNQLFGILKGWQDLHLRPLIKAILLNPEHEWQVDD 216

Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265
           MAA I  S A L RLF ++   +P  +    RL  A  LLK Q  SV  +A +  F    
Sbjct: 217 MAAFIHLSRAQLVRLFNKHLCISPHAFVHKIRLQKAAMLLKSQAGSVLSIALSCGFQSES 276

Query: 266 HFSKAFKHKFGYAPS 280
           HF  AFK ++   PS
Sbjct: 277 HFITAFKKQYCVTPS 291


>UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=Caldicellulosiruptor
           saccharolyticus DSM 8903 RepID=A4XH00_CALS8
          Length = 275

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 28/233 (12%)

Query: 68  VQGCGKILLKNGEQITLHGNCIIFLKP----------------MDIHSYHCEGLVWEQYW 111
           +QG   + +   E+     N  + L P                ++I SY     V  +  
Sbjct: 43  LQGDKYVEINESEKFKYDSNSFVILPPYSRVKLEIEEKTKALVIEIDSYLINH-VLSKLK 101

Query: 112 MEFTPTSMMDIPVGQQSVIYNGEIYNQELTE----VAELITSPEAIKNNLAVAFLTKIIY 167
           +EF P  + ++     ++ + G+ Y+ +LT+    + +   S +  +  L   +  + +Y
Sbjct: 102 IEFEPYELGNV----NNIFFVGK-YSPDLTQTYKKIVDTFFSRKVNREFLLDLYTQEFVY 156

Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
                  A+   + +  +I  ++  ++ +  +R  ++D+A      E    R F ++TGK
Sbjct: 157 DIFKYRGAEKIINDKNSEIYHILDYINNNYLRRLKISDIAKEFNMKEYEFTRYFKKFTGK 216

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           +PKEY  D +L+ A  LLK +   V +V   + + +  HF K FK+KFG  P+
Sbjct: 217 SPKEYIKDLKLNKAKELLKFEN--VTDVCYDIGYENISHFIKEFKNKFGVTPN 267


>UniRef50_B6AWE3 Transcriptional regulator, AraC family n=1 Tax=Rhodobacterales
           bacterium HTCC2083 RepID=B6AWE3_9RHOB
          Length = 335

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           + + IAT+  +++   S + +A     S   L RLF RY G +PK +Y+  RL  A  LL
Sbjct: 233 VSRAIATMENTIEYPVSPSVLAKDFGISTRQLERLFQRYIGTSPKRHYMRLRLREAYRLL 292

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            Q    + EVA    F    HFSK FK ++  +P
Sbjct: 293 IQSQLGIAEVALACGFTSPSHFSKCFKTEYSISP 326


>UniRef50_Q989Y4 Transcriptional regulator n=2 Tax=Rhizobiales RepID=Q989Y4_RHILO
          Length = 356

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 50/92 (54%)

Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247
           K+I  +  +L +  ++ DMAA+   S   + R+F +  G++P  YYL+ RL+ A  L+  
Sbjct: 225 KIIEQMERNLDEPVALEDMAASNCLSRRQVERIFSKQIGRSPARYYLEMRLERAHLLIVN 284

Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
               V E+A    F  + HFSKA++  +G  P
Sbjct: 285 SQLPVVEIAMACGFISASHFSKAYRENYGMTP 316


>UniRef50_C8SL33 Transcriptional regulator, AraC family n=2 Tax=Mesorhizobium
           RepID=C8SL33_9RHIZ
          Length = 359

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 18/215 (8%)

Query: 77  KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY--WMEFTPTSMMDIPVGQQSVIYNGE 134
           +    I + G  ++  +        C  + WEQ+  ++E  P+ +      Q +   +GE
Sbjct: 103 RRARLIGIGGGTLVLARAGLAEGRRC-AVHWEQFPLFLEKFPSVIAT----QAAFEEDGE 157

Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI-CLMYADGKKD---PQRR------ 184
           +Y       A   T  + +  +   A + +I  + I C + + G +    P  R      
Sbjct: 158 LYTCS-GAGASFDTFLDLVGRDHGAAVVNRICEKAIACRVRSVGDRQRLPPNSRVRCNHK 216

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
            +  +I  + A +    SV  + A    +   + RLF R  G+ P  YYL+ RL+ A  L
Sbjct: 217 AVITVIDQMEAHIGDPKSVNGLVAATGLTRRQIERLFRRELGRGPSRYYLELRLERAHLL 276

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           L+     V E+A    F  + HFSK ++  +G AP
Sbjct: 277 LRSSNLPVIEIAVACGFVSASHFSKVYREMYGCAP 311


>UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bacteroides plebeius DSM
           17135 RepID=B5CYP4_9BACE
          Length = 297

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 8/232 (3%)

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPTSMM 120
           +V +Y  +G G       E + +    +I + P   HSY   +   W++YW+ F    + 
Sbjct: 63  FVQLYIAKGKGIFFSSPNESMEIKEGDLILIPPYTWHSYLPHKSTGWKEYWIGFDCPHIE 122

Query: 121 DIP----VGQQSVIYNGEIYNQ--ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY 174
           +        +   IY   I ++   L E A  I + E       +A +  +I+  I    
Sbjct: 123 NCLKHNLFNKNKKIYRIGIQDKIINLYEEAIRIANEEKSGYQQYLAGIANLIFCMIPYYN 182

Query: 175 ADGKKDPQRRQI-EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233
            +   DP    I  K    +   L    S    AA I  S +W R++F  YTG TP +Y 
Sbjct: 183 NNRSFDPATEDIINKAKIIMKEELLNGISPEKTAAQIKLSYSWFRKIFKDYTGVTPSQYI 242

Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            + ++  A   L      + E+A  L + D  +F K FK   G  PS   K+
Sbjct: 243 QELKMQEAKICLTTSHIQIKEIAYHLGYEDIAYFIKLFKRHTGKRPSEYRKS 294


>UniRef50_C1D8X9 Putative uncharacterized protein n=1 Tax=Laribacter hongkongensis
           HLHK9 RepID=C1D8X9_LARHH
          Length = 338

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
           Q I L    G   P+   + + ++ + A++++  S  D+A  +  S   L RLF +Y   
Sbjct: 214 QRIPLATRIGGSQPK---LTEAVSLMEANIEEPLSTDDIAFYVGVSRRQLERLFKQYLNT 270

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            P  YYL+ RL+ A  LL+Q   S+ ++  +  F    HFS  +++ FG  P
Sbjct: 271 VPSRYYLELRLNRARQLLQQTSKSIVQIGLSCGFSSGPHFSSTYRNHFGITP 322


>UniRef50_D1XPD5 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp.
           ACTE RepID=D1XPD5_9ACTO
          Length = 327

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 4/113 (3%)

Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
           +KDP   +  +L   LHA     W+VA +A     S + L + F    G+ P  Y    R
Sbjct: 218 QKDPVAGETLRL---LHAEPAAPWTVAALARRTGVSRSTLAKRFTELLGEPPLTYLTHWR 274

Query: 238 LDLALSLLKQQGN-SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
           + LA  LL +Q + +V  VA T+ + D F FS AFK   G  P A    T+ H
Sbjct: 275 MTLAADLLTEQPSATVASVARTVGYTDPFAFSVAFKRVRGTTPRAHRHTTEAH 327


>UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=Leptotrichia
           buccalis C-1013-b RepID=C7NB33_LEPBD
          Length = 283

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 10/239 (4%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWE 108
           P  K  P   + ++  Y   G G      G+   L      F++P +I  Y   E   W 
Sbjct: 27  PLHKYGPTTRSGYMLHYIKSGKG-TFYSRGKTFHLKAGEFFFIEPEEIIWYEADEYEPWA 85

Query: 109 QYWMEFTPTSMMD----IPVGQQSVIYN----GEIYNQELTEVAELITSPEAIKNNLAVA 160
            YW+ F    + +      V +   I++    G+I   ++ E+ E+    E     L   
Sbjct: 86  YYWIGFRGNMVSEYLRRTSVNKNKPIFSAQKGGDIIRDKIVEIFEISVISEDNDLLLNAR 145

Query: 161 FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
            L  + Y   C      KKD +   + K +  +  +      ++++A  +     +L R+
Sbjct: 146 LLEILYYLSECFPLTYAKKDSKNTILAKALQIMRNNFDTSVHISEIAKALYIDRTYLHRI 205

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           F       PK+Y  + R+  A  LL Q    V  +A ++   D+ +FSK FK+K   +P
Sbjct: 206 FKEKMKIAPKDYLTNLRIAKAKELLTQTDYPVNIIAQSVGIEDAQNFSKLFKNKENISP 264


>UniRef50_Q2CGN3 Transcriptional regulator, AraC/XylS family protein n=1
           Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGN3_9RHOB
          Length = 292

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           ++K++  +H   +    +  +A T+ C+   L  +F R  G +P +Y    R+  A   L
Sbjct: 186 VQKVLDMIHGETETWPQIGALAETVGCTRGHLHAIFRRDIGMSPSDYVQRHRIRQACECL 245

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           +   ++V +VA TL F  S HF++ F+   G  PS
Sbjct: 246 RSGSDTVTDVAHTLGFASSQHFARTFRKYLGLTPS 280


>UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
           RepID=A7VU88_9CLOT
          Length = 308

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 22/251 (8%)

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWMEFTPTSMMDI- 122
           VY   G   + L  G+ I ++   + +L P++       +   +++ ++  +  S++DI 
Sbjct: 60  VYQTSGL-TVTLHEGDGIFINSGVLHYLHPLEPCREARLQTQFFDKSFLAGSLGSLLDIK 118

Query: 123 ---PVGQQSVIYNGEIYNQE---------LTEVAELITSPEAIKNNLAVAFLTKI---IY 167
              PV  Q  +    +Y  +         L +  EL +  E           +++   IY
Sbjct: 119 YVAPVLDQRQLEAVPLYRSDPESKGFLECLQKGVELCSRKEEFFELRLRNLFSELWESIY 178

Query: 168 QWICLMYADG---KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           +W     +     ++  +  +I++++  + A   ++ SV+ +AA+IP SE    RLF   
Sbjct: 179 RWAAQKESSTPSLRRSIEDDRIKQMMRYVQAHFSEKISVSSIAASIPISERECYRLFQNS 238

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            G TP EY +  RL  A SLL     S+ ++A    F  S +F K F+      P A  +
Sbjct: 239 MGITPIEYLISVRLQNAQSLLMNTNKSILDIALETGFGSSSYFGKIFRSHHRLTP-AQYR 297

Query: 285 NTDQHPTDASP 295
           N  +    A+P
Sbjct: 298 NLSRQKALAAP 308


>UniRef50_Q89ME0 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum
           RepID=Q89ME0_BRAJA
          Length = 300

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 3/98 (3%)

Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241
           Q R++E+L   L ASL  R ++A++A T     A   + F R TG TP+ +    R+D+A
Sbjct: 199 QLRRVEEL---LDASLDGRITIAEIAKTCHMPTASFSKSFARSTGVTPRRWLSMRRVDVA 255

Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
             LL+ +  S+ E A    F D  HF++ F    G  P
Sbjct: 256 RKLLRDKAISLSEAALACGFSDQSHFNRVFLQLVGCTP 293


>UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=Bacillus
           cellulosilyticus DSM 2522 RepID=D2LYQ6_BACS4
          Length = 294

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 44/309 (14%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
            S ++ NET   I    +E VI + + +  +   Y   H    W  D  K    N+++  
Sbjct: 3   HSLNLPNET---IGFRTHEKVIGTLVDIHVVGKQYVHSH-DYYW--DGMKRNDKNTFIFQ 56

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKP------MDIHSYHCEGLV-----------WE 108
           YT+ G G + ++        G   +   P      +  HS+H E +            W 
Sbjct: 57  YTLSGEGAVFIEGKTHKVQQGQGFMLEVPGEHIYYLPSHSHHWEFIFLTLRGQAAADCWR 116

Query: 109 QYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA-FLTKIIY 167
               +  P  +++IP+ + ++I       +++  V EL     A K NL    F +   Y
Sbjct: 117 YVNRKVGP--IINIPI-ESALI-------EQVVNVYEL-----AFKKNLIDHYFASSKAY 161

Query: 168 QWICLMYADGKKDPQRRQ----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
           Q++   Y   K    + Q    I + I  ++ + +  +SV D+A  I  S+ +  +LF  
Sbjct: 162 QFVMECYRYFKSFKAKEQMPDTITQAINFINKNYKASFSVQDVATNINLSKYYFIKLFKE 221

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
               TP +Y    RL+ A++LL     +V E+A  + + D  +F+KAF+   G +P    
Sbjct: 222 SMNMTPGQYITKVRLEQAINLLSHTELTVKEIAMQVGYGDDNYFNKAFRKVVGTSPGE-F 280

Query: 284 KNTDQHPTD 292
           + +   P D
Sbjct: 281 RRSKHLPFD 289


>UniRef50_A3YG62 Transcriptional regulator, AraC family protein n=2 Tax=Marinomonas
           sp. MED121 RepID=A3YG62_9GAMM
          Length = 337

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%)

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
           P   ++ ++++ + A+L++  S+ ++A+ +  S   L R F ++   TP  YYL  RL  
Sbjct: 216 PSHSKLMEVVSLMEANLEEPISLDELASFVSMSRRQLERQFQKHLNCTPSRYYLKLRLVR 275

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           A  LL Q   S+ ++     F  + HFSK ++  FG  P
Sbjct: 276 ARKLLTQTSMSITDIGIACGFVSTPHFSKCYREYFGIPP 314


>UniRef50_Q7MDX7 AraC-type DNA-binding domain-containing protein n=11
           Tax=Vibrionales RepID=Q7MDX7_VIBVY
          Length = 316

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 23/146 (15%)

Query: 163 TKIIYQWICLMYAD-GKKDPQRR----------------------QIEKLIATLHASLQQ 199
           T++I+  +CL+Y + G +   RR                      +++ L   + + L  
Sbjct: 169 TELIWSLMCLLYGEIGGRPSYRRMLVSEAARMLLVIEPTISTSLSRVQTLFNEVESQLHL 228

Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259
            WSVADMA+    SE    RL  +  G +P+   +  R++ A  LL+ +  ++  ++  L
Sbjct: 229 PWSVADMASRCFISEEQFNRLTKQLFGVSPRTRLIQLRMEKAADLLRYKEWTITMISHRL 288

Query: 260 NFFDSFHFSKAFKHKFGYAPSAVLKN 285
            + D ++F+  FK  FG +P+   KN
Sbjct: 289 GYKDPYNFTHRFKKYFGISPTHFRKN 314


>UniRef50_D1N130 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N130_9BACT
          Length = 284

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 13/226 (5%)

Query: 72  GKILLKNGEQIT-LHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFT---PTSMMDIPVGQ- 126
           G+  ++NG Q T L    +  L P +   +   G  W+ YW  F    P    +I  G  
Sbjct: 50  GRCTVRNGRQSTVLLPGSVYLLAPAESRVFERFG-SWDAYWALFPLRLPLLWPEINPGIF 108

Query: 127 --QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR 184
             Q       I  + L E   L T        LA   +  ++ +   L    G     RR
Sbjct: 109 RIQPPRREHRIMLRNLIETVNLTTECRGEWYQLAGNLIDNVVLRGNRLA---GNAPSDRR 165

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
            +  L   L +  +   ++ ++AA    S +     F R  G +P+++   ARL +A  L
Sbjct: 166 ML--LAVKLLSRPENDLAMDEIAAKCGMSHSTFFSEFKRVHGLSPRQFREQARLQMAKIL 223

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHP 290
           LK +  S+GE+A   N  D  + SK F+  FG  P   ++   + P
Sbjct: 224 LKSEKLSIGEIAARTNLIDGSYLSKRFRKVFGVTPREYVRKFRESP 269


>UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1
           Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT
          Length = 316

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 51/97 (52%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           ++ K+I ++     + W V D AA    S A   R+F   TG+TP  Y L  R+  +++L
Sbjct: 208 RVAKVIGSIEDEFTKPWKVEDFAAMAHMSRANFMRVFRTATGETPINYLLQLRIQKSMTL 267

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           L     S+ E+A  + F DS ++++ FK   G +P A
Sbjct: 268 LTSTKLSISEIAFEVGFNDSNYYTRQFKASQGISPLA 304


>UniRef50_C6CVN2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CVN2_PAESJ
          Length = 259

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 24/246 (9%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI------TLHGNCIIFLKPMDIHSYHCE 103
           P      ++A+   A+Y V G  KI+L+ G+ +      + +G C+    P   H     
Sbjct: 22  PEGASTLVLASYGKALYWV-GNEKIILEKGDLLYIPACQSYYGKCV----PTVFH----- 71

Query: 104 GLVWEQYWMEFT----PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159
               E+Y +EFT    P  ++      +S     E+  + +  +    T      + L +
Sbjct: 72  ----EKYVIEFTADTPPLPLLQNNHWVKSRTGAYELILERIKTMHNEWTEKHLYADVLGL 127

Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
           A L + +  W   +          +Q+E++ + +    QQ+ +  ++   I  S  +   
Sbjct: 128 AILYECLALWNRELDEGPATSAAHQQVERMKSYIMNYYQQKVTKEELGEYIRKSPNYAAT 187

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           LF R TG+T  EY   AR+  A+ LL     +VGE+++++ + D  +F + FK + G  P
Sbjct: 188 LFRRVTGQTISEYVHKARVKKAIYLLVDSTLTVGEISESVGYRDLSYFQRIFKRETGKTP 247

Query: 280 SAVLKN 285
           +A +K+
Sbjct: 248 TAYMKD 253


>UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061
           RepID=B4AG99_BACPU
          Length = 302

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 1/142 (0%)

Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ 199
           LT + + + +P  +          +I+YQ + +     +  P  R IE+ +A +      
Sbjct: 158 LTMLHQNVHAPGGMGKLRVKELFLRILYQML-MGCKQKESSPNERIIEEAVAYIRGQYMN 216

Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259
             ++ D+A     +       F +YTG  P +Y +  R++ A  +LK     + +V+ T+
Sbjct: 217 PLTLQDLAELCDMNPKSFSYFFHKYTGLHPIDYVIQYRMERAREILKAGNIPIRDVSMTV 276

Query: 260 NFFDSFHFSKAFKHKFGYAPSA 281
            + +  +FS+ FK KFG  PSA
Sbjct: 277 GYPNPLYFSRLFKKKFGVPPSA 298


>UniRef50_A9D0S3 Transcription regulator n=3 Tax=Phyllobacteriaceae
           RepID=A9D0S3_9RHIZ
          Length = 334

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229
           + ++  D + DP+   + + +  +   +    S+A +A  +  S   L +LF R  G+TP
Sbjct: 213 VNVIVGDSRDDPR---LVRAVRIMETHIDAPLSIAAIARRVSMSARGLEQLFSRQMGETP 269

Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
             Y+L  RL  A  L+     SV ++A    F     FS+AF+ +FG +PS
Sbjct: 270 GAYFLSLRLGAARRLVNDTPLSVTDIASRTGFSSQPAFSRAFRRQFGLSPS 320


>UniRef50_Q01Y24 Transcriptional regulator, AraC family n=2 Tax=Acidobacteria
           RepID=Q01Y24_SOLUE
          Length = 335

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)

Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLH 194
           +E+AE     E + N LA     +I+   I       K       DP+   +   ++ +H
Sbjct: 174 SEMAEQAPGSEIVANRLAEVLFIQILRAHIASGPERNKGWLRAIFDPK---MGTALSAIH 230

Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254
            S++  W+V  +A     S +     F    G+TP EY  + R+  A+ LL+Q+   + +
Sbjct: 231 DSVKTPWTVESLAEAAGMSRSAFAARFKELLGQTPLEYVTEWRMQKAMQLLQQRDKKLID 290

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           VA ++ +     FSKAFK   G  P   LK 
Sbjct: 291 VARSVGYESGAAFSKAFKRVVGINPGEYLKG 321


>UniRef50_B9JE85 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter
           K84 RepID=B9JE85_AGRRK
          Length = 296

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 50/94 (53%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           + +L+  + ASL++  S+AD+A     S+  + R F   TG  P  Y +  RL+ A  LL
Sbjct: 194 LRRLMEMIEASLERPVSIADLAREADLSDHHMSRAFRLSTGLPPHAYMIRRRLERAAELL 253

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           +    S+ EVA    + +  HFS AF+ + G AP
Sbjct: 254 RFSSASITEVAYMCGYSNPSHFSTAFRGEMGIAP 287


>UniRef50_B7VRW6 Putative AraC-family transcriptional regulatory protein n=9
           Tax=Vibrionales RepID=B7VRW6_VIBSL
          Length = 279

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 18/224 (8%)

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPV 124
           +YTV+G G +       I   G+CI     ++ + +  E   W+  W+  +P    +  V
Sbjct: 57  LYTVRGKGWLESGACRYILEPGSCITVPAGIE-NGFGIEEETWQIAWIFLSPDKKWEGVV 115

Query: 125 GQQSVIYNGEIYNQELTEVAELITS-------PEAIKNNLAVAFLTKIIYQWICLMYADG 177
             +         N  L+  AE+++S         A+  +L  A     + Q   ++ A  
Sbjct: 116 SDE--------VNYTLSPAAEVVSSCIHTLLRSIALPIDLGGAIAIHSVAQIEFMINAPV 167

Query: 178 KKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
            +   R   ++ ++   +   L + W+V ++A+  PCSE    RL  RY   +P  + + 
Sbjct: 168 PQQQSRNLIRLRRVFDNVQKQLHKEWNVHELASLFPCSEPHFHRLCQRYYSHSPMTHIMR 227

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            R++ A  LL+    S+  + + + + ++ +FS  FK   G  P
Sbjct: 228 MRMEYAARLLRSSDWSIQHIGEIVGYPNAANFSTRFKAWSGMTP 271


>UniRef50_Q0FAD1 Transcriptional regulator, AraC family protein n=1
           Tax=Rhodobacterales bacterium HTCC2255
           RepID=Q0FAD1_9RHOB
          Length = 317

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 53/97 (54%)

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
           ++++K +  +H +++   ++ ++A  I  S   L R FL+  G++PK+ YL+ RL     
Sbjct: 214 QEVQKALEIMHKNIEDILTIPNIANKIGISSKQLHRFFLKDLGQSPKKVYLNIRLSFGRH 273

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           LL+     + EVA    + +   FS+AFK +F   PS
Sbjct: 274 LLQATQKPINEVALRSGYENVSAFSRAFKMRFDQTPS 310


>UniRef50_C6XTD1 Cyclic nucleotide-binding n=1 Tax=Pedobacter heparinus DSM 2366
           RepID=C6XTD1_PEDHD
          Length = 319

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 44/75 (58%)

Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264
           ++A     S   L RLF++  G T  ++ +  R+  A+ LLKQ G +VG++A T  + + 
Sbjct: 239 EIAKQFNTSTRTLNRLFVKTFGLTVSKFIVKLRMAKAMELLKQPGLTVGQIALTAGYKNI 298

Query: 265 FHFSKAFKHKFGYAP 279
           FHFSK FK  +GY P
Sbjct: 299 FHFSKVFKMYYGYPP 313


>UniRef50_Q2GAB8 Transcriptional regulator, AraC family n=1 Tax=Novosphingobium
           aromaticivorans DSM 12444 RepID=Q2GAB8_NOVAD
          Length = 299

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           ++ K++  + A      S+  MAA    + +   RLF +  G TP +Y + ARLD A  +
Sbjct: 193 RLHKIMNAILADPAAEHSLEAMAAVAGVTPSHFCRLFKKAIGITPHQYVMKARLDRAQQM 252

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           L Q   S+  +++   F    HFS+AF+  FG APS
Sbjct: 253 LVQTEMSLAALSEAAGFASQSHFSRAFRSWFGMAPS 288


>UniRef50_C6VNH1 Transcription regulator n=3 Tax=Lactobacillus plantarum
           RepID=C6VNH1_LACPJ
          Length = 275

 Score = 57.4 bits (137), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%)

Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261
           ++  +AA++  S A+L R F    G+TP  Y    R+  A  LL Q+  +V +VA  + +
Sbjct: 193 TLGTVAASLHVSAAYLSRTFKAIQGETPISYLTRLRMQRAKQLLMQEAITVRQVAHAVGY 252

Query: 262 FDSFHFSKAFKHKFGYAPSAV 282
            D ++FSK FK  FG AP+ +
Sbjct: 253 QDPYYFSKVFKRYFGAAPTLI 273


>UniRef50_A9FWP2 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum
           'So ce 56' RepID=A9FWP2_SORC5
          Length = 304

 Score = 57.4 bits (137), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 49/103 (47%)

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
           R++ +++  +     +RWSV  +A     S A L R FL   G  P  Y  + R+  A  
Sbjct: 186 RRVARVLRLMQEKPAERWSVEALAKAAGLSRAALARRFLAELGVPPLRYLAELRMQRAAE 245

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           LL +   S+  VA  + +   F FS+AFK   G AP A  + +
Sbjct: 246 LLAEGDGSLAAVAAEVGYDSEFAFSRAFKRHTGEAPGAFRRRS 288


>UniRef50_D1V7I4 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales
           RepID=D1V7I4_9ACTO
          Length = 308

 Score = 57.4 bits (137), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 6/148 (4%)

Query: 142 EVAELITSPEAIKNNLAVAFLTKIIYQWI---CLMYADGKKDPQRRQIEKLIATLHASLQ 198
           EV E     EAI ++L  A L  I+  W       ++    DP    +   +  +H    
Sbjct: 156 EVEEQEPGAEAIVSSLVGALLVYILRAWQEDHPSGWSRALADPA---VGPSLHRMHRDPA 212

Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADT 258
           + W+V  + A    S A   R F    G+ P  Y    RL  A  +L+QQ   +  VA +
Sbjct: 213 RPWTVEQLGAAAGVSRATFTRRFTALVGEPPLTYLTRWRLTSAARMLRQQDVPLSVVAHS 272

Query: 259 LNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           + +   F F+KAFK ++G AP    + T
Sbjct: 273 VGYTSEFAFAKAFKREYGLAPGTYRRVT 300


>UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas RepID=A4VLS2_PSEU5
          Length = 377

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 52/96 (54%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           ++ K+I  ++  L + +S+A +A  +  SE    R+F R TG +P +Y++  R+  A  L
Sbjct: 277 KLRKVIGVMNERLAEEFSLAALAQVVELSEYHFSRMFKRATGLSPSQYFIGLRMARARQL 336

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           L +   S+ ++   + +    HFS+ F+ + G  PS
Sbjct: 337 LLETPRSIIDIGLEVGYSSPSHFSQVFRREVGVTPS 372


>UniRef50_B5WL81 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp.
           H160 RepID=B5WL81_9BURK
          Length = 335

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%)

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
           L  +  ++ SV D A TI  SE    RLF R  G TP +Y L ARL+L   LL +    +
Sbjct: 231 LERNCGRQISVGDAARTIAMSERNFLRLFKREMGTTPSQYLLQARLNLGCELLARSDLPI 290

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            ++A      +   FSK FK +F  +P+
Sbjct: 291 DKIARRTGLTNGERFSKVFKKQFAMSPT 318


>UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae
           ATCC 43184 RepID=A7AA81_9PORP
          Length = 287

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           ++K I+ +  + Q   +++D+A+     E +LR+LF +Y   +P +Y    R++ A+ LL
Sbjct: 189 LKKAISYIRLNYQSDITISDVASQTGVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELL 248

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           +    SV EV     F    +FS+ FK + G +P  V K
Sbjct: 249 RNTEMSVKEVCFACGFQSPQYFSRIFKQQMGISPREVTK 287


>UniRef50_D0LBD5 Helix-turn-helix-domain containing protein AraC type n=1
           Tax=Gordonia bronchialis DSM 43247 RepID=D0LBD5_GORB4
          Length = 385

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 22/173 (12%)

Query: 113 EFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITS-PEAIKNNLAVAFLTKIIYQWIC 171
           EF PTS    P G         I    LT++A      P A   + A + +  +    + 
Sbjct: 171 EFAPTSR---PAG---------IVGTLLTQIANADAPIPRAASTSFATSVVDMLTTTIMA 218

Query: 172 LMYADGKKDPQRRQ----IEKLIA-TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226
            + A+ +K+  R Q    I+++IA  LH      +S++D+AA    S   +++L +  TG
Sbjct: 219 ELPAEHRKESFRSQDLARIQQVIADNLH---DADFSLSDLAAQAGMSARNVQKL-VATTG 274

Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            +P  +   AR++ A  LL   G SV EV++ + F D  HFS+ F+ + G +P
Sbjct: 275 NSPMAWLYAARIERAKHLLMSTGQSVAEVSECVGFRDVSHFSRMFRKQVGVSP 327


>UniRef50_D1N7S2 Transcriptional regulator, AraC family n=2 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N7S2_9BACT
          Length = 302

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 57/101 (56%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           +++++  L A L Q  S+ ++A     S+A LRRLF ++ G++P ++ +  R++ A+ LL
Sbjct: 198 LQRILRYLEARLDQPVSIGELAEEFRLSQATLRRLFRKHLGESPVDFLIRRRMETAMRLL 257

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           +     V  +A  + +  + +FS  F+   G +PSA  K +
Sbjct: 258 RLTEQPVKWIAFQVGYAGALYFSAEFRKFTGESPSAFRKRS 298


>UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n=2
           Tax=Oceanospirillaceae RepID=Q2BQ54_9GAMM
          Length = 304

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/233 (20%), Positives = 102/233 (43%), Gaps = 14/233 (6%)

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTSMMDIP 123
           +Y + G G+ ++ +G++  +    I+ +     H+Y       W  YW+ F      D  
Sbjct: 62  IYCLDGEGEAVI-DGQKTRIRSGDILLIPKGVSHTYQARKRKPWTIYWVHFHGHHAEDFA 120

Query: 124 -------VGQQSVIYNGEIYNQELTEVAELITSPEAIKN---NLAVAFLTKIIYQWICLM 173
                    Q+  +    I+++  ++   L+ + E+  N    +  A   + I   I L+
Sbjct: 121 QHLQQRESNQRRYVMPIGIHSRLASDFEALLEARESTYNLNAYICAANQLRQILSHIALL 180

Query: 174 YADGKKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
               K+   R    IE++ + +   + ++  +  +A +I  S+    + +   TG TP  
Sbjct: 181 QPLAKQKQSRGGLDIERVHSLMQTHIHEQLDLDTLAESISLSKYHFVKKYKEVTGTTPIN 240

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           +++  +++ A  LL    N + EVA  + + D+++FS+ FK   G +PS   K
Sbjct: 241 HFIQLKIERACHLLDTTNNGINEVAFAVGYEDAYYFSRIFKKLMGVSPSQYRK 293


>UniRef50_Q1QE65 Transcriptional regulator, AraC family n=1 Tax=Psychrobacter
           cryohalolentis K5 RepID=Q1QE65_PSYCK
          Length = 311

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
           KDP    + K +  +H +  Q WS+ ++A     S +   + F    G  P  Y +D RL
Sbjct: 201 KDPF---LTKALVAMHENPSQNWSIHELAEVAGMSRSSFAQRFKDVVGMPPLTYLIDYRL 257

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
            LA   L+ Q NS+  +++ + +     FS+AFK  +G +P A
Sbjct: 258 RLAARYLRLQQNSISRISELVGYASDSTFSQAFKRVYGISPKA 300


>UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales
           RepID=C4ZBG0_EUBR3
          Length = 279

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 19/237 (8%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114
           P I + ++  Y + G G+  + NG   TL       + P     Y  +    WE  W+ F
Sbjct: 37  PGIRDHYLIHYIISGKGRYTV-NGSVHTLTPGDAFLVYPNTEVIYQADAQDPWEYTWVGF 95

Query: 115 TPTSMMDIPVGQQSV--------IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166
           T +    I               + NG    ++L  + +        +N L    +T  +
Sbjct: 96  TGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYD--ARGTEFENALE---MTGRL 150

Query: 167 YQWICLMYADGKKDPQRRQ----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFL 222
           Y  + L  +     P +      ++K I  + A+     +V D+A+ I  S + L R F 
Sbjct: 151 YTTLALFVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIGLSRSHLFRSFQ 210

Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
              G +PKEY  D R+  A  LLK    S+  +A ++ F +S +FSK F    G +P
Sbjct: 211 SILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKIKGLSP 267


>UniRef50_A1AM63 Transcriptional regulator, AraC family n=1 Tax=Pelobacter
           propionicus DSM 2379 RepID=A1AM63_PELPD
          Length = 311

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 55/107 (51%)

Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239
           D ++  ++     L AS+    S+ ++A  +  S    ++ F R  G  P  Y  + RL+
Sbjct: 184 DREKSAVDAACKLLEASMDNPPSLEELATQVGMSATRFKQAFSRIRGVPPFAYLRNLRLE 243

Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            A+ LL+ +G  V EVA  + + +  HF+K F+ +FG  PS V + T
Sbjct: 244 RAMCLLRYEGLRVTEVALEVGYNNFSHFAKIFEARFGIVPSRVRRET 290


>UniRef50_Q9K6M6 Transcriptional regulator n=1 Tax=Bacillus halodurans
           RepID=Q9K6M6_BACHD
          Length = 279

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 108/232 (46%), Gaps = 21/232 (9%)

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH---CEGLVWEQYWMEFTPTSMMD 121
           + TV G G I+ +N  QI L  N  + L P   HSY     +   W+  ++ F+ T + +
Sbjct: 42  IQTVSGQGSIMFQN-RQINLTTNNGVLLLPHIPHSYQNAQSDSTPWQTLYVTFSGTMVKE 100

Query: 122 IPVGQQSVIYNGEIY--NQEL---TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
           + +  +  +Y    +  NQE    T +A+++   +  +++ +++  +  +Y+++ L+   
Sbjct: 101 VLITLE--LYQSAFFHWNQEAPISTFLAKVLKQSDETRDSFSIS-ASSAVYEFLLLLKKY 157

Query: 177 GKKDPQRRQIEKLIATLHAS---LQQRWSVAD-----MAATIPCSEAWLRRLFLRYTGKT 228
           GK +    +    +  L++    ++ + S  D     MA  I  S+  L  LF +    T
Sbjct: 158 GKTNNSNAKETNHLVRLYSLIDWMKTQLSNPDVGLDEMARFINTSKRHLNSLFQKNFHLT 217

Query: 229 PKEYYLDARLDLALSLLKQQG-NSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           P  Y+++ R+  +  LL +    ++GE+A  + F  + HF   F+   G  P
Sbjct: 218 PYAYFVNLRIQQSKKLLLEDNCATIGEIAKQVGFRSTSHFVATFRKMVGIPP 269


>UniRef50_C7QI96 Transcriptional regulator, AraC family n=1 Tax=Catenulispora
           acidiphila DSM 44928 RepID=C7QI96_CATAD
          Length = 315

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 177 GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDA 236
           G  DPQ   I   ++ +H    + W+V ++A     S +     F+   GK P  Y    
Sbjct: 204 GAFDPQ---IGLALSAIHRDPGREWTVEELARACNLSRSSFAARFVERVGKPPATYLAHV 260

Query: 237 RLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           RLD A +LL+     V +VA+T+ +     FS+AFK+++G  P+
Sbjct: 261 RLDAATTLLRDTFLPVTQVAETVGYASEAAFSRAFKNRYGTPPA 304


>UniRef50_C1D3S3 Putative transcriptional regulator, AraC family n=1 Tax=Deinococcus
           deserti VCD115 RepID=C1D3S3_DEIDV
          Length = 226

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           ++ + +A +HA   +    + +AA +  SE    RL  R    TPK++ L  R D AL L
Sbjct: 118 RVAQALAFMHAHFARPLRTSALAAQVGLSEDSFERLMRRVCHMTPKQFLLRVRFDAALRL 177

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           L++   SV ++A    + D   FS+ F+   G+ P
Sbjct: 178 LRESRRSVADIAHECGYSDHSAFSRKFRAMTGFTP 212


>UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1NB22_9BACT
          Length = 297

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           ++ ++I+ L +   + W + ++A     S   L RLF   TG +P +Y +  RL  A   
Sbjct: 195 RVGRIISLLESEFMREWRLEELAKLAATSPNNLLRLFRTVTGTSPVDYLIRVRLRRAAEA 254

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           LK    +V E+A    F DS +F++ F+  +G +P    K 
Sbjct: 255 LKNTPGAVAEIAADCGFADSNYFARKFRAAYGVSPREFRKR 295


>UniRef50_C2FW53 AraC family transcriptional regulator n=2 Tax=Sphingobacterium
           spiritivorum RepID=C2FW53_9SPHI
          Length = 326

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 3/102 (2%)

Query: 182 QRRQIEKLIATLHASLQ---QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
           ++  IEK+ A     LQ   Q +S+ D+A  +  ++  L++ F    G T   ++ D ++
Sbjct: 221 KKSDIEKIYAVREFMLQHIDQSYSLTDLARRVGTNDFLLKKGFKELFGTTVFGFWNDTKM 280

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           + A  +++ Q  ++ EVAD + + +  HF+ AFK +FG APS
Sbjct: 281 EQAHKMIRDQHMNISEVADAVGYKNPQHFTVAFKRRFGIAPS 322


>UniRef50_A8HRE8 Transcriptional regulator n=3 Tax=Alphaproteobacteria
           RepID=A8HRE8_AZOC5
          Length = 336

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 49/96 (51%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           + K +  +   L++  S  ++AA    S+  L RLF R+   +P  +YLD RL  A  LL
Sbjct: 237 LAKAVEVMARHLERPLSTGEVAAAANLSQRQLERLFQRHLSASPAAFYLDLRLARARELL 296

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           +     V +VA    F  + HFS A+  +FG+ P A
Sbjct: 297 RLSPLPVTDVALACGFQSAAHFSVAYGRRFGHPPRA 332


>UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium
           cellulovorans 743B RepID=C5RL17_CLOCL
          Length = 282

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/237 (19%), Positives = 99/237 (41%), Gaps = 16/237 (6%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114
           P +   ++  Y   G G   + NG    L       + P DI +Y  +    W   W+EF
Sbjct: 37  PNLKERFLIHYIFSGKGSFEI-NGYTYNLESGQGFLISPGDIATYKADDKDPWTYAWVEF 95

Query: 115 ----TPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI 170
               +   +  I +  ++ +++ +   ++L E +         K+      +   +Y ++
Sbjct: 96  NGRLSEKFLHQIGLSSKTPVFSCK--KKDLLEASFQYIFDACKKSRNNNLLILSSLYHFL 153

Query: 171 CLMYADGKKDPQRRQIEKL--------IATLHASLQQRWSVADMAATIPCSEAWLRRLFL 222
            +++     +   +  EKL        +  +  +  +   +++MA  +  +  ++  LF 
Sbjct: 154 AMIHEASAPEQTEKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLSLNRNYMSTLFK 213

Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
              G TP+ Y ++ R+D A  L+K    ++GE++  + + D   FS+ FK  FG  P
Sbjct: 214 ESVGITPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMFKKLFGIPP 270


>UniRef50_C6CXM1 Transcriptional regulator, AraC family n=2 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CXM1_PAESJ
          Length = 279

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 6/129 (4%)

Query: 155 NNLAVAFLTKII----YQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210
           N + +AF T I+    YQ +    A GK D  +  I +++  +HA    + +V ++A+  
Sbjct: 144 NIMRIAFETVIVLFQRYQALFSQTAGGKND--QTVIHEVLKEIHARFYSQLTVHELASKH 201

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             SE+ LR+ F    G +PK+Y ++ R++ A  LL+Q   ++  ++  + F  S  F   
Sbjct: 202 FVSESNLRKKFTEIVGVSPKQYMINLRMEEAKRLLRQTDKAIESISSEVGFTSSSRFYDF 261

Query: 271 FKHKFGYAP 279
           F    G  P
Sbjct: 262 FVKSVGVTP 270


>UniRef50_C6JDE2 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA
           RepID=C6JDE2_9FIRM
          Length = 242

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 51/96 (53%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           I KLI  + +++  +  +AD+A  +  +  +LR+ F +  G + K Y +  R+  A  LL
Sbjct: 144 IYKLIKEIDSTMLFQKRIADIAEELNYNPDYLRQKFKKIAGVSLKAYIMQQRIQNACKLL 203

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           +Q+  S  E+A    F  S  FS+ FK K GY P +
Sbjct: 204 EQENYSCTEIAQLCGFSSSSQFSRIFKEKMGYTPKS 239


>UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum
           DSM 5476 RepID=C0ECP2_9CLOT
          Length = 327

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 69/127 (54%), Gaps = 3/127 (2%)

Query: 166 IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRW---SVADMAATIPCSEAWLRRLFL 222
           ++  +  +Y++ K +   R  +  +A +   +++ +   ++++ A T   S ++L  L  
Sbjct: 201 LFTELARVYSERKTNQPARPAKPGMAEIIGFIRENYATVTLSETAKTFSYSPSYLSYLIK 260

Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282
           + TG+T KE   D R++ A + LK    ++ ++++ L F DSF+ +K FK ++G +PS  
Sbjct: 261 KETGQTFKEIVRDFRIESACNFLKNTQLTLEQISEILGFQDSFYIAKVFKQRYGISPSEY 320

Query: 283 LKNTDQH 289
            K + Q 
Sbjct: 321 RKRSRQQ 327


>UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=Geobacter sp. FRC-32
           RepID=B9M3B3_GEOSF
          Length = 292

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 48/101 (47%)

Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242
           R +I +++  LH    ++ +V  MA     S +   R+F + TG +P  Y +D RL  A 
Sbjct: 186 RIEINRVVEYLHRRYGEKVTVDKMATVAAMSPSHFSRVFRKETGLSPMNYLIDLRLAKAR 245

Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            LL      V  VA    F    HF+  F+ +FG  PS V+
Sbjct: 246 RLLVSGETCVTSVALRCGFASHSHFTDTFRKRFGCPPSDVM 286


>UniRef50_C2AR91 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Tsukamurella paurometabola DSM 20162
           RepID=C2AR91_TSUPA
          Length = 271

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 17/217 (7%)

Query: 75  LLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWM---------EFTPTSMMDIPVG 125
           LL +G    +    +  + P  +  Y   G    +Y           E  P + + +P+G
Sbjct: 44  LLIDGVSYQIRPGAVSLVPPGAVTEYRYRGPSRHRYVHFSAPADADPEHGPGAPLVVPLG 103

Query: 126 QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ 185
            +   Y     N  L  VA  I  PE     + +A L +++ + +    A    +     
Sbjct: 104 PE---YPAIDENFRLA-VANAILRPERSAAEIWIA-LHRVLDRAVS---AGAPANDPVDH 155

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           + + ++ + A LQ R +VA +AA +  S   L RLF   TG+T   Y    R++ A+ LL
Sbjct: 156 VAQALSIIEARLQDRLTVAGIAAEVGISHTHLTRLFRAETGRTVIGYVRHRRIERAVHLL 215

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282
           +     +  VA T+ F D   F+K+ + + G +P  V
Sbjct: 216 RHTTMPIAAVAATVGFDDPQAFNKSCRVESGLSPRGV 252


>UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus
           faecalis RepID=C0X5H9_ENTFA
          Length = 272

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 50/99 (50%)

Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241
           +R  +   I  L     +  ++  +A  +  +  +L + F   TG  P  Y +  RL+ A
Sbjct: 172 KRNLVNHTIYYLETHHDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHA 231

Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
             LLK    SV EVA T+ + D++HFSK FK  +G +PS
Sbjct: 232 KELLKNDSLSVKEVAKTVGYEDAYHFSKLFKKYYGKSPS 270


>UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-like protein n=2
           Tax=Opitutaceae bacterium TAV2 RepID=C0A4H9_9BACT
          Length = 307

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 3/102 (2%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           Q+  +I T +   ++   +  +A     S + L R F    G++P  Y L+ RL  A  L
Sbjct: 203 QVRDIIRTRY---REELHLTTLAKDAGLSPSHLSRRFKARFGRSPISYQLELRLQSACEL 259

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           L+ +G S+ E+A  + F D F+FS+ F+ + G AP +  K +
Sbjct: 260 LRTRGESLAEIAAAVGFEDVFYFSRLFRRRLGEAPGSFRKAS 301


>UniRef50_D1N759 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N759_9BACT
          Length = 261

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 98/254 (38%), Gaps = 29/254 (11%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVY-TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
           HY V  P+    P +    + +Y  V GCG+          L+ N + F  P D H    
Sbjct: 23  HYTV--PKGWSDPPLVKPILELYWCVSGCGR-FGSGASGWLLNENQVCFYFPGDRHEITA 79

Query: 103 EGLVWEQYWM-------EFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155
           E   ++ +W+        F   S       +       E++ +   E+ +L    E    
Sbjct: 80  ESASFDYWWLTIDGPNVPFLIDSFRLERPSRPVAPCPEELFLKLAREIRDLGRDGEYRAG 139

Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRW-----SVADMAATI 210
             A   LT+ +              P   +   LI      +++R+     SV  ++A +
Sbjct: 140 ATAYEILTRAML-------------PPSGEESGLILRFKQLVEERYDDPALSVRSLSAAL 186

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
               + L RL  R+ G  P+EY    RL +A+ +L +   SV E+A+   F D  +F K 
Sbjct: 187 GVHRSTLTRLVTRHCGMPPQEYLTGFRLQIAMQMLHESAVSVKEIAEATGFSDQNYFGKV 246

Query: 271 FKHKFGYAPSAVLK 284
           F  + G  P+ + +
Sbjct: 247 FLKRLGKTPTQMRR 260


>UniRef50_B0C3V1 Transcriptional Regulator, AraC family n=5 Tax=Cyanobacteria
           RepID=B0C3V1_ACAM1
          Length = 283

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 2/129 (1%)

Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210
           +++ N LAV  L     +   L   +G   P  RQ+++++  + A L     +AD+A  +
Sbjct: 151 DSLANILAVNLLRHHATKRPQLPIYEGGLPP--RQLQQVLDYIDAHLDCEIKLADLAQIL 208

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             S     RLF   TGK+P +Y +  R++ A  LLKQ    + ++A    F    H SK 
Sbjct: 209 DMSPFHFSRLFKLSTGKSPHQYLIQQRIEHAKQLLKQTDRRIIDIAYECGFNSHSHLSKQ 268

Query: 271 FKHKFGYAP 279
           F+   G  P
Sbjct: 269 FRQMMGVTP 277


>UniRef50_UPI000197B404 hypothetical protein BACCOPRO_02224 n=1 Tax=Bacteroides coprophilus
           DSM 18228 RepID=UPI000197B404
          Length = 270

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 52/103 (50%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           ++E  +  +HA+ +    + ++A     S  +  ++F +    TP  Y +  R++ AL L
Sbjct: 164 RLEPAMRYMHANYKDTIHLKELACMCNVSPNYFHKIFKQTFKITPTNYIILLRMNSALQL 223

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           LK  G ++ E+A  L F D+ HF K FK  +G  P    +N +
Sbjct: 224 LKDNGVTIKEIAFELGFTDNAHFCKTFKKYYGITPGEYQRNQN 266


>UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=Desulfovibrio
           RepID=B8DKQ8_DESVM
          Length = 292

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 5/129 (3%)

Query: 157 LAVAFLTKIIYQWIC-----LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211
           L    + +++++ +C      ++A   K+    +IEK +  +H +  + ++V  +A  + 
Sbjct: 156 LGPGLVRELLFRVLCGENAAALHALATKNTNMSRIEKALKQIHGNFSEPFNVDQLAGFVN 215

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
            S +   R F   T  +P +Y    RL+ A SLL++ G    E A  + +     FS+ F
Sbjct: 216 MSPSTFHRAFKDVTAFSPIQYLKRVRLNKARSLLREDGVRASEAARMVGYESVSQFSREF 275

Query: 272 KHKFGYAPS 280
           +  FG +PS
Sbjct: 276 RRYFGISPS 284


>UniRef50_C0Z8E4 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0Z8E4_BREBN
          Length = 548

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 55/99 (55%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           +++ I+ +H +  +  ++ D+A     +  +   +F +  GK+P EY    R++ A +LL
Sbjct: 172 VDQTISYMHTNYAEPITLDDLANRAGLTPRYYTEVFKKKVGKSPIEYLTSCRMEHAKTLL 231

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           ++    + EVA  + + D F+FS+ FK + G +P+  ++
Sbjct: 232 RESNKRLREVARLVGYADEFYFSRRFKQQVGVSPTVFVR 270


>UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           phytofermentans ISDg RepID=A9KSF8_CLOPH
          Length = 292

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           ++++I  L  + + + S+  +A  +  S  ++ ++F   TG++P  Y +  RL+ A  +L
Sbjct: 182 VKRIINYLMENYEHKISLDQIAHNMYLSPVYISKIFKEETGESPINYLIKIRLEKAKEIL 241

Query: 246 -KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            +++G S+  +A+ + + D +HFSK FK  FG +P
Sbjct: 242 SEREGGSIKNIANEIGYDDVYHFSKLFKKYFGISP 276


>UniRef50_Q4A0B7 Putative transcriptional regulator n=1 Tax=Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305
           RepID=Q4A0B7_STAS1
          Length = 293

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 1/101 (0%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           +++++++ +H   Q + ++  ++  I  SEA   RLF +Y  +TP EY L  RL+ + S+
Sbjct: 188 RVKQMMSYIHKHFQDKITLGHLSQNIYLSEAEAIRLFKKYVKQTPFEYLLRYRLEQSKSI 247

Query: 245 L-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           L K + +++ E+A    F  + +F K FK ++G  P    K
Sbjct: 248 LDKDRLSTITEIAMACGFSTTSYFIKVFKARYGMTPKQYQK 288


>UniRef50_B6W1X0 Sensor protein n=6 Tax=Bacteroides RepID=B6W1X0_9BACE
          Length = 1447

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 183  RRQIEKLIATLHASLQQ-RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241
            R+  EKL   L   L    +++ D A+ +  S A   R     TG TP EY    R+  A
Sbjct: 1343 RKFGEKLQTILEKQLDNPEFTIEDFASAVGVSRAAFFRKVKGVTGYTPNEYMRILRMKRA 1402

Query: 242  LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            + LL++   +V E+A  +   D  +FSK FK  FG  PSA L
Sbjct: 1403 MELLQEGIYNVSEIAYKVGMNDPLYFSKCFKSHFGAPPSAYL 1444


>UniRef50_B5ZT32 Transcriptional regulator, AraC family n=9 Tax=Rhizobium
           RepID=B5ZT32_RHILW
          Length = 340

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query: 182 QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLA 241
           Q  ++  +I  +  +L +  S+ ++A     S   + RLF +  G++P  YYL+ RLD A
Sbjct: 222 QNAKVLSIIELMEGNLAEPLSLIEIADGAGLSRRQIERLFRQEMGRSPARYYLEIRLDRA 281

Query: 242 LSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
             LL Q    V EVA    F  + HFSK ++  +  +P
Sbjct: 282 RHLLVQSSMPVVEVAVACGFVSASHFSKCYRELYHRSP 319


>UniRef50_C3JN73 Transcriptional regulator, AraC family n=1 Tax=Rhodococcus
           erythropolis SK121 RepID=C3JN73_RHOER
          Length = 379

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           +I + +  +H    + W++ ++A     S +     F R  G+TP  Y  + RLD A  L
Sbjct: 274 RIGQALEAVHNDPSRNWTIDELATLSTLSRSSFAERFSRLVGQTPGAYITERRLDRAAEL 333

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           L Q    VG +A T+ +     FS+AF+ +F  +P
Sbjct: 334 LVQTTEPVGTIAITVGYESDAAFSRAFRRRFDASP 368


>UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=Marinomonas
           RepID=A6VUH3_MARMS
          Length = 316

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242
            ++I+ L+  +H++ ++R S+AD++     SE+   R+F      +P  Y L+ RL  ++
Sbjct: 193 EKRIQSLLNFIHSNYEERISIADISEAANISESECYRIFRNALNCSPNSYLLNYRLRKSV 252

Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN---TDQHP 290
            LL +    + ++A    F  S +F+K FK  F   P    KN   T  HP
Sbjct: 253 QLLTESNKQIADIAFESGFNCSAYFAKKFKLAFNVTPMQFRKNYSVTLDHP 303


>UniRef50_C5BRT4 Helix-turn-helix-domain containing protein, AraC type n=2
           Tax=Gammaproteobacteria RepID=C5BRT4_TERTT
          Length = 320

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           I   +A +H   ++ W+V  +A  +  S +     F    G++ K Y    R+ LA S L
Sbjct: 216 IGSALAAIHREPERNWTVDTLAREVGLSRSGFSARFSELVGESAKRYITHWRMQLARSKL 275

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
              G S+GE+AD L +     F +AFK   G +P ++ K+ 
Sbjct: 276 LDSGISMGELADQLGYHSEAAFCRAFKRVIGVSPGSIKKSA 316


>UniRef50_B9Z8M5 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum
           2002 RepID=B9Z8M5_9NEIS
          Length = 327

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
           Q I L    G   P+   + + ++ + A++++  +  D+A  +  S   L RLF ++   
Sbjct: 204 QRIPLATRIGASQPK---LTEAVSLMEANIEEPLTTDDIAYYVGISRRQLERLFKQHLSA 260

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            P +YYL+ RL  A  LL+Q   S+ ++     F    HFS ++++ FG  P
Sbjct: 261 VPSKYYLELRLKRARQLLQQTSKSIVQIGLACGFSSGPHFSSSYRNHFGITP 312


>UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia
           RepID=A4XJL7_CALS8
          Length = 291

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           IEK+I  +     +  ++ D+A  +  S  +L  LF +  G T KEY ++ RL  +  L+
Sbjct: 179 IEKIIEYIKNHYMEDITLDDLAKMVYLSPTYLSYLFKKQLGITFKEYLINIRLKKSKELI 238

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           +    S+GE++  +   D  +FS+ FK KFG +P
Sbjct: 239 ETTDLSIGEISKMVGIEDQNYFSRLFKKKFGVSP 272


>UniRef50_Q1QSP4 Transcriptional regulator, AraC family with amidase-like domain n=1
           Tax=Chromohalobacter salexigens DSM 3043
           RepID=Q1QSP4_CHRSD
          Length = 327

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 6/141 (4%)

Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATI 210
           LA A   ++I+  +   +   ++D  +R       + + +A +   L+    +A +AA I
Sbjct: 186 LAAAVSEQLIHARMRPRHDQQRQDLTQRLGTHKHSVIEAVALMERHLEAPLPLARLAARI 245

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             S   L+RLF +  G+ P+++YL  RL  A  LL++    +  +     F  +  FS+A
Sbjct: 246 GISLRQLQRLFEQELGERPRDHYLRLRLQRARQLLRETDRDILSIGLACGFTSASSFSRA 305

Query: 271 FKHKFGYAPSAVLKNTDQHPT 291
           +K  FG +P    +  D  PT
Sbjct: 306 YKQHFGASPRHARRGPDTPPT 326


>UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8RPD4_9CLOT
          Length = 532

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 3/111 (2%)

Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229
           +C    DG      R I++ I   ++   +  ++ D+A  +  + A+L  +F + TG+T 
Sbjct: 418 LCQRQKDGMGSRPVRMIKEYIGEHYS---ENITLNDIADIVFLNPAYLSAMFKKETGQTL 474

Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            +Y +D R+D A  +L+    ++GE+A  + + D  HFSK F    G  P+
Sbjct: 475 TQYLIDVRIDKAKEMLRNPERTIGEIACMVGYQDERHFSKLFSKMTGVKPT 525


>UniRef50_C5AH65 Transcriptional regulator, AraC family protein n=9
           Tax=Proteobacteria RepID=C5AH65_BURGB
          Length = 269

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%)

Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254
           A L ++ ++ ++AA          +LF R T  TP  + +  RL+ A  +L +   S+ E
Sbjct: 182 AHLAEKITLDELAALCGVDRFVFLKLFKRTTAMTPHAWLVRLRLERACLMLHRGTQSIAE 241

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPS 280
           VA  + F+D  HF++AF+  FG APS
Sbjct: 242 VAQAVGFYDQSHFNRAFRRAFGCAPS 267


>UniRef50_A1R3X3 Transcriptional regulator, AraC family domain n=1 Tax=Arthrobacter
           aurescens TC1 RepID=A1R3X3_ARTAT
          Length = 175

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 3/117 (2%)

Query: 174 YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233
           +A G +DP    + + +A LH      W+VA++A     S A +   F    G++P  Y 
Sbjct: 51  WAAGTRDPI---VARALAALHQEPAAPWTVAELALRCHVSRATMAARFRAAVGQSPMAYL 107

Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHP 290
              RL LA   L     +   +A+ + + ++F FS AF  ++G +PS   ++    P
Sbjct: 108 TTRRLALAADRLASSTVTTAVIAEEVGYSNAFTFSAAFSREYGVSPSGYRRSASFPP 164


>UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA
           RepID=C6JEQ5_9FIRM
          Length = 301

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           +E  I  +    Q+   ++D+A  I  S A+L   F +  G + + + +D ++  A SLL
Sbjct: 186 VELAIEYIKDMYQKGIGISDIADNIGISRAYLNSSFQKELGMSAQTFLIDYKMHKAASLL 245

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
                SV E+A+ + + D   FSKAFK KFG +P
Sbjct: 246 VSTSLSVKEIANNVGYEDQLVFSKAFKKKFGMSP 279


>UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
           27759 RepID=A8SS64_9FIRM
          Length = 328

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%)

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
           P +  ++  +  +      +  + D+A  I  S + L   F +  G +P+EY ++ RL+ 
Sbjct: 206 PSKIYVKAAVDFITEKYMNKIKIDDIADFIGISRSHLTGSFKKEMGVSPQEYLINFRLEK 265

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           A SLL+     +  +A    + DS  FSKAFK KFG +P +
Sbjct: 266 AASLLRSSKEQINIIAYQCGYEDSLSFSKAFKQKFGMSPKS 306


>UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 Tax=Oxalobacter
           formigenes OXCC13 RepID=C3X9W6_OXAFO
          Length = 293

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 177 GKKD-PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
           GKK+ P  R++++ +A +     +  S+ D+A +   S++   R F      TP +Y ++
Sbjct: 182 GKKEKPVSRRMQRFLAYIEKHYAEAISLDDLAGSGNVSKSECLRCFRVSMQTTPYKYLVE 241

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            RL  A  LL++    VGE+A    F  + +F K F+ K G++P
Sbjct: 242 YRLSKAAILLQETDKPVGEIASCTGFHQASYFGKCFREKTGFSP 285


>UniRef50_A6LQ44 Helix-turn-helix-domain containing protein, AraC type n=3
           Tax=Clostridium RepID=A6LQ44_CLOB8
          Length = 223

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 51/100 (51%)

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           I +++  LH +++ + S+  ++  +  SE ++   F ++ G T  +Y    R+D A  LL
Sbjct: 121 INRILKHLHLNIESQISLKKLSGELNLSEGYISDCFKKHMGMTIMKYAKKIRIDRAKVLL 180

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
               +S+ E+  TL F D  HF K FK   G +PS    N
Sbjct: 181 VTTTSSILEIGLTLGFHDQSHFHKVFKSFTGVSPSEYRNN 220


>UniRef50_A4WA52 Transcriptional regulator, AraC family n=10 Tax=Proteobacteria
           RepID=A4WA52_ENT38
          Length = 308

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 2/152 (1%)

Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLA-VAFLTKIIYQWICLMYADGKKDPQRRQIE 187
           V  + ++Y +     A L ++  A   ++A + F+    Y+              RR ++
Sbjct: 153 VTTDEDLYRRFCELNATLFSTASAEDKSVALIEFIGDCEYESCVAKAFPVMSSEVRRTLK 212

Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247
            +I  +  + +Q W++A++A     S   + R F   TG TP  Y L+AR++ A   L Q
Sbjct: 213 NVIDMMQQTERQPWTLAELAHLSGMSRYQIIRAFRAATGMTPHAYQLNARINQARRWL-Q 271

Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            G+ + ++A  L F D  HF + FK   G  P
Sbjct: 272 SGHDMADIAYRLGFADQSHFQRVFKAHTGVTP 303


>UniRef50_C0AA65 AraC-type DNA-binding domain-containing protein-like protein n=1
           Tax=Opitutaceae bacterium TAV2 RepID=C0AA65_9BACT
          Length = 288

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 38/65 (58%)

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
           L RLF R+TG+T  +Y L+ RL  A  LL+ +G +V EVA    F    +F + F+  +G
Sbjct: 223 LSRLFSRFTGRTFSQYLLEFRLKKAAVLLEGKGRTVAEVAAACGFGSDAYFVRCFRRHYG 282

Query: 277 YAPSA 281
           + P A
Sbjct: 283 HTPGA 287


>UniRef50_D1T3G0 Transcriptional regulator, AraC family n=1 Tax=Acidovorax avenae
           subsp. avenae ATCC 19860 RepID=D1T3G0_9BURK
          Length = 285

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 181 PQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239
           PQ R Q E+L   +   + Q  SVA+MA T   S     RLF +   K+P +Y ++ R++
Sbjct: 178 PQLRGQWERLRLYIDEHIGQPISVAEMARTTGYSTHHFARLFRQSFQKSPHQYVIERRIE 237

Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            A  LL   G SV +VA    F    H S AF+ + G  P 
Sbjct: 238 RARQLLLDPGRSVADVAAECGFATQAHLSSAFRRRLGLTPG 278


>UniRef50_C1D5R0 Activator protein MtlR n=1 Tax=Laribacter hongkongensis HLHK9
           RepID=C1D5R0_LARHH
          Length = 279

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 20/238 (8%)

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWMEF--TP 116
           S + +   +G G + +   + + L  + ++FL P   H    + +G +W+   +      
Sbjct: 31  SQIVLPFTEGVG-VRIGQSDPVELPVDSVLFLSPFVHHHIDGNVQGAIWDTLAVNLYRMG 89

Query: 117 TSMMDIPV----------GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166
            S ++ P           G   ++Y GE+  Q  T    L  S  +I++ L V  +  ++
Sbjct: 90  PSFINSPYLGEIHSLYRDGFAGILYRGEVAQQVRTHFKRLENS-FSIEHMLGVLSILHLL 148

Query: 167 YQWICLMYADGKKDP-QRRQIEKLIAT---LHASLQQRWSVADMAATIPCSEAWLRRLFL 222
            Q         +  P  RR+IE  ++    ++  +     +A +AA I  S A   R F 
Sbjct: 149 SQSDGWPLTPAEVHPMDRREIELCVSIDDYVNNHIDTPIDIASVAARIHMSTASFCRFFR 208

Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           RY G +   + LD +++ A   L      + ++AD L F  + HFS  FK + G  P 
Sbjct: 209 RYFGMSFHAWLLDKKIETACYQLHVGTAPIQDIADRLGFHSASHFSMTFKRRMGITPG 266


>UniRef50_Q1QY53 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QY53_CHRSD
          Length = 263

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256
           L +R +V D+A     SEA     F R+TG TP +Y L  RL+ A +LL+     + +VA
Sbjct: 162 LAERITVGDLARLACLSEAHFSERFRRHTGLTPYQYLLRRRLEHASALLRGAAIPLSDVA 221

Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297
               F      S AF+  +G  PS + +N    P  A+ HN
Sbjct: 222 ARTGFASQSALSHAFRRHYGQPPSRLRRNGAT-PLAATHHN 261


>UniRef50_C7G8V7 Putative raffinose operon transcriptional regulatory protein RafR
           n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8V7_9FIRM
          Length = 289

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 2/105 (1%)

Query: 177 GKKDPQRRQIEKLIATLHASLQQ-RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
           G+ D   +++E  +  +     +  + +  +   +  S   L RLF   TG +PK+Y L+
Sbjct: 181 GRSDEDEKRMEMAVLLIKNHYHKSEFHIQRLCEMLNISRVTLYRLFKSKTGISPKQYLLN 240

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
            R++ A  LL + G SV   A +  F DSF+FS+ FK   G +PS
Sbjct: 241 YRIEQA-KLLLRMGTSVKNTAASCGFNDSFYFSRVFKEYTGSSPS 284


>UniRef50_C7PCD4 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga
           pinensis DSM 2588 RepID=C7PCD4_CHIPD
          Length = 282

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 5/128 (3%)

Query: 162 LTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWSVADMAATIPCSEAW 216
           L  +  Q + L+ A G      RQ     ++K+I  LH    +  S+ D++         
Sbjct: 154 LLSVHQQLLSLLQAAGDNAKPGRQLFGGRVDKVIELLHDRWNENISLQDLSTVTALHPVT 213

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
           + R F  Y   +  EY    R++ +L L++Q   S+ E+A    FFD  HF +AFK + G
Sbjct: 214 VSRHFTAYFDCSLGEYMRRIRVEKSLLLVRQHAYSLTEIAYQCGFFDQSHFIRAFKAQTG 273

Query: 277 YAPSAVLK 284
           + P A  K
Sbjct: 274 FLPKAFRK 281


>UniRef50_UPI000178A031 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI000178A031
          Length = 260

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%)

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           +I+KL A +     +  ++ D A  +     +L +LF   TG T KEY    R++ A  +
Sbjct: 160 RIKKLTAFIEEHYAEDLTLNDFAEQLNLHPVYLGKLFKLNTGSTYKEYLQRVRVNNAEIM 219

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           L     +V E A+   F+D  +FSK FK   GY PSA+ ++
Sbjct: 220 LATGNCTVTEAAECCGFYDLSYFSKVFKESKGYPPSAIKRH 260


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P31449 Uncharacterized HTH-type transcriptional regulat...   410   e-113
UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp....   218   2e-55
UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R...   217   4e-55
UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabac...   217   5e-55
UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales ...   214   3e-54
UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ...   212   8e-54
UniRef50_C7PPV8 Transcriptional regulator, AraC family n=3 Tax=S...   212   9e-54
UniRef50_C6IJ00 Transcriptional regulator n=2 Tax=Bacteroides Re...   212   1e-53
UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides R...   212   1e-53
UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Ta...   211   3e-53
UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=C...   210   6e-53
UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero...   210   6e-53
UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bactero...   210   6e-53
UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto...   210   6e-53
UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=D...   209   1e-52
UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella ori...   208   2e-52
UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales ...   207   3e-52
UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 ...   207   5e-52
UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostri...   206   8e-52
UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali...   205   2e-51
UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C...   204   2e-51
UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C...   203   6e-51
UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=C...   202   1e-50
UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=D...   201   2e-50
UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco...   200   3e-50
UniRef50_C9KYS9 Transcriptional regulator n=7 Tax=Bacteroides Re...   200   4e-50
UniRef50_UPI0001C34C27 transcriptional regulator, AraC family pr...   200   5e-50
UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri...   200   5e-50
UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostri...   200   6e-50
UniRef50_UPI0001788616 transcriptional regulator, AraC family n=...   200   7e-50
UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=C...   199   1e-49
UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=C...   198   2e-49
UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridiu...   197   3e-49
UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=B...   197   3e-49
UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=C...   197   6e-49
UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=P...   196   8e-49
UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=C...   196   9e-49
UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel...   196   1e-48
UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococ...   195   1e-48
UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bactero...   195   1e-48
UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=J...   195   1e-48
UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS fami...   195   2e-48
UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n...   195   2e-48
UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P...   195   2e-48
UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostri...   195   2e-48
UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=L...   195   2e-48
UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon tra...   194   3e-48
UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C...   194   3e-48
UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=S...   193   7e-48
UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1...   193   8e-48
UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostri...   192   9e-48
UniRef50_B8FW52 Transcriptional regulator, AraC family n=2 Tax=D...   192   9e-48
UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=D...   192   1e-47
UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales ...   192   1e-47
UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n...   192   2e-47
UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P...   191   2e-47
UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=La...   191   3e-47
UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=R...   191   3e-47
UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides Re...   190   4e-47
UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=...   190   5e-47
UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales ...   190   7e-47
UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family prot...   189   8e-47
UniRef50_P43465 Raffinose operon transcriptional regulatory prot...   189   8e-47
UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=B...   189   8e-47
UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=P...   189   1e-46
UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus s...   186   7e-46
UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=P...   185   1e-45
UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bactero...   185   1e-45
UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=P...   185   2e-45
UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Ba...   185   2e-45
UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=P...   183   5e-45
UniRef50_A9KKI4 Transcriptional regulator, AraC family n=1 Tax=C...   183   5e-45
UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Or...   183   5e-45
UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pe...   183   7e-45
UniRef50_C6LM61 Putative raffinose operon transcriptional regula...   183   7e-45
UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostri...   182   2e-44
UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=L...   181   2e-44
UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C...   181   2e-44
UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=P...   180   3e-44
UniRef50_C6IY48 AraC family transcriptional regulator n=1 Tax=Pa...   180   5e-44
UniRef50_B0MR70 Putative uncharacterized protein n=1 Tax=Eubacte...   180   5e-44
UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=b...   180   6e-44
UniRef50_C9AKD6 AraC-type DNA-binding domain-containing protein ...   178   2e-43
UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n...   178   3e-43
UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=...   177   3e-43
UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecali...   177   3e-43
UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 T...   177   4e-43
UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostri...   177   5e-43
UniRef50_UPI000196AF05 hypothetical protein CATMIT_01210 n=1 Tax...   177   6e-43
UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostri...   176   7e-43
UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein,...   175   1e-42
UniRef50_C7G8V7 Putative raffinose operon transcriptional regula...   175   1e-42
UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type...   175   2e-42
UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax...   175   2e-42
UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=...   172   1e-41
UniRef50_Q47XU2 Transcriptional regulator, AraC family n=1 Tax=C...   170   4e-41
UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi...   170   8e-41
UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10 Tax=...   169   9e-41
UniRef50_B0N996 Putative uncharacterized protein n=1 Tax=Clostri...   169   9e-41
UniRef50_B9K0A2 Transcriptional regulator AraC family n=18 Tax=R...   169   9e-41
UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=P...   169   1e-40
UniRef50_D1N947 Transcriptional regulator, AraC family n=1 Tax=V...   168   2e-40
UniRef50_A4BIK9 AraC-type DNA-binding domain-containing protein ...   168   3e-40
UniRef50_C4ZBP1 Two-component response regulator n=2 Tax=Clostri...   167   3e-40
UniRef50_C4Z413 AraC family transcriptional regulator, arabinose...   167   4e-40
UniRef50_UPI000174610C response regulator receiver domain protei...   167   5e-40
UniRef50_C4FY02 Putative uncharacterized protein n=1 Tax=Catonel...   167   7e-40
UniRef50_B0NXL6 Putative uncharacterized protein n=1 Tax=Clostri...   166   8e-40
UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopi...   166   9e-40
UniRef50_C7T9S5 Putative transcriptional regulator n=2 Tax=Lacto...   166   9e-40
UniRef50_C1DME1 Transcriptional regulator AraC family n=1 Tax=Az...   165   1e-39
UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-...   165   1e-39
UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R...   165   2e-39
UniRef50_C4DTW1 Transcriptional regulator containing an amidase ...   164   4e-39
UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C...   163   6e-39
UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri...   163   9e-39
UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevi...   162   1e-38
UniRef50_UPI0001788D3A transcriptional regulator, AraC family n=...   161   3e-38
UniRef50_C7MF03 DNA-binding domain-containing protein, AraC-type...   161   3e-38
UniRef50_C5BNS5 Response regulator receiver domain protein n=1 T...   160   4e-38
UniRef50_A5Z7W7 Putative uncharacterized protein n=1 Tax=Eubacte...   160   5e-38
UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B...   160   6e-38
UniRef50_D1N759 Transcriptional regulator, AraC family n=1 Tax=V...   159   8e-38
UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T...   159   1e-37
UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero...   158   2e-37
UniRef50_D1NAQ6 Transcriptional regulator, AraC family n=1 Tax=V...   158   2e-37
UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=V...   157   6e-37
UniRef50_A3YE82 Transcriptional Regulator, AraC family protein n...   156   8e-37
UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumil...   156   1e-36
UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacilla...   156   1e-36
UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1...   155   2e-36
UniRef50_C0ZJ95 Probable transcriptional regulator n=1 Tax=Brevi...   154   4e-36
UniRef50_B4D0H6 Transcriptional regulator, AraC family n=1 Tax=C...   154   4e-36
UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s...   154   4e-36
UniRef50_D1N1W3 Transcriptional regulator, AraC family n=1 Tax=V...   153   5e-36
UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R...   153   5e-36
UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=...   153   6e-36
UniRef50_B4D5Y6 Transcriptional regulator, AraC family n=1 Tax=C...   153   6e-36
UniRef50_C7NB40 Transcriptional regulator, AraC family n=2 Tax=L...   153   7e-36
UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D...   152   1e-35
UniRef50_C0A9I7 AraC-type DNA-binding domain-containing protein-...   152   1e-35
UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=G...   152   1e-35
UniRef50_UPI0001C35596 transcriptional regulator, AraC family pr...   152   1e-35
UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa...   152   2e-35
UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac...   152   2e-35
UniRef50_C0Z8E4 Probable transcriptional regulator n=1 Tax=Brevi...   152   2e-35
UniRef50_B5JCR2 Transcriptional regulator, AraC family protein n...   152   2e-35

Sequences not found previously or not previously below threshold:

UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptoco...   194   3e-48
UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=C...   192   1e-47
UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac...   192   1e-47
UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID...   192   1e-47
UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco...   190   4e-47
UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=H...   190   6e-47
UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerot...   189   8e-47
UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostri...   188   2e-46
UniRef50_A6M1I8 Transcriptional regulator, AraC family n=1 Tax=C...   187   4e-46
UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ...   187   5e-46
UniRef50_A6VAM9 Transcriptional regulator, AraC family n=3 Tax=P...   186   1e-45
UniRef50_A1U2J4 Transcriptional regulator, AraC family n=3 Tax=M...   185   1e-45
UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=P...   185   2e-45
UniRef50_C5BZM6 Transcriptional regulator, AraC family n=1 Tax=B...   184   4e-45
UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminoc...   183   5e-45
UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales...   183   5e-45
UniRef50_C7PUR1 Transcriptional regulator, AraC family n=1 Tax=C...   183   6e-45
UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=M...   183   7e-45
UniRef50_A4XS27 Transcriptional regulator, AraC family n=1 Tax=P...   182   1e-44
UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulator...   181   2e-44
UniRef50_C6XV52 Helix-turn-helix-domain containing protein AraC ...   181   2e-44
UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=u...   181   2e-44
UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Ba...   181   3e-44
UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1...   181   3e-44
UniRef50_A5ZSJ3 Putative uncharacterized protein n=4 Tax=Clostri...   179   1e-43
UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1...   178   1e-43
UniRef50_B0MEA0 Putative uncharacterized protein n=1 Tax=Anaeros...   178   2e-43
UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=L...   177   4e-43
UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=P...   177   4e-43
UniRef50_B0MNH5 Putative uncharacterized protein n=1 Tax=Eubacte...   175   2e-42
UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=M...   175   2e-42
UniRef50_P28809 MmsAB operon regulatory protein n=6 Tax=Pseudomo...   175   2e-42
UniRef50_Q5WK33 AraC/XylS family transcriptional regulator n=1 T...   174   3e-42
UniRef50_B8KL56 AraC protein, arabinose-binding/dimerisation n=1...   173   9e-42
UniRef50_Q5WK82 AraC/XylS family transcriptional regulator n=1 T...   172   1e-41
UniRef50_A8YTU0 Msm operon regulatory protein n=3 Tax=Lactobacil...   172   2e-41
UniRef50_UPI00017450D3 transcriptional regulator, AraC family pr...   172   2e-41
UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=L...   172   2e-41
UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=S...   171   2e-41
UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=B...   171   2e-41
UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=P...   170   4e-41
UniRef50_O33813 Lactose operon transcription activator n=4 Tax=S...   170   4e-41
UniRef50_A4AC34 Transcriptional regulator, AraC family protein n...   170   5e-41
UniRef50_C6D787 Transcriptional regulator, AraC family n=1 Tax=P...   170   5e-41
UniRef50_A4XK77 Transcriptional regulator, AraC family n=2 Tax=C...   170   6e-41
UniRef50_A0QZE6 MmsAB operon regulatory protein n=1 Tax=Mycobact...   170   6e-41
UniRef50_B8H8F4 Transcriptional regulator, AraC family n=1 Tax=A...   170   7e-41
UniRef50_A0Y944 Transcriptional regulator, AraC family protein n...   168   2e-40
UniRef50_C0X7J7 AraC family transcriptional regulator n=22 Tax=E...   167   3e-40
UniRef50_C7Q5G1 Transcriptional regulator, AraC family n=1 Tax=C...   167   5e-40
UniRef50_A5ZYS8 Putative uncharacterized protein n=1 Tax=Ruminoc...   166   8e-40
UniRef50_C6CWX0 Transcriptional regulator, AraC family n=1 Tax=P...   165   2e-39
UniRef50_C2EN40 AraC family transcriptional regulator n=2 Tax=La...   165   2e-39
UniRef50_C6D3L8 Transcriptional regulator, AraC family n=1 Tax=P...   164   3e-39
UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P...   163   4e-39
UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivor...   163   6e-39
UniRef50_C8Q370 Transcriptional regulator, AraC family n=1 Tax=P...   163   6e-39
UniRef50_C6IZ62 Transcriptional regulator n=1 Tax=Paenibacillus ...   163   8e-39
UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri...   162   1e-38
UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C...   162   1e-38
UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibr...   161   2e-38
UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C...   161   3e-38
UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=P...   161   3e-38
UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri...   161   4e-38
UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc...   160   7e-38
UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=P...   160   7e-38
UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum...   160   7e-38
UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabin...   159   9e-38
UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri...   158   1e-37
UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D...   158   1e-37
UniRef50_C6D174 Transcriptional regulator, AraC family n=1 Tax=P...   158   1e-37
UniRef50_D2Q7T6 AraC-type transcriptional regulator n=2 Tax=Bifi...   158   2e-37
UniRef50_P07642 Arabinose operon regulatory protein n=160 Tax=Pr...   158   2e-37
UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C...   158   2e-37
UniRef50_Q6PU53 BgaR n=2 Tax=Bacillus megaterium RepID=Q6PU53_BACME   158   2e-37
UniRef50_A4BF96 Arabinose operon regulatory protein n=1 Tax=Rein...   158   3e-37
UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr...   157   4e-37
UniRef50_C6CRB9 Transcriptional regulator, AraC family n=3 Tax=B...   157   6e-37
UniRef50_D1WXI3 Transcriptional regulator, AraC family n=5 Tax=S...   157   7e-37
UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=C...   156   7e-37
UniRef50_C5C2R6 Transcriptional regulator, AraC family n=1 Tax=B...   156   1e-36
UniRef50_C6IZN2 Transcriptional regulator n=1 Tax=Paenibacillus ...   156   1e-36
UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri...   155   1e-36
UniRef50_UPI0001788A2C transcriptional regulator, AraC family n=...   155   1e-36
UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa...   155   2e-36
UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P...   155   2e-36
UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri...   155   2e-36
UniRef50_C6J5K7 Transcriptional regulator (Fragment) n=1 Tax=Pae...   154   3e-36
UniRef50_A6DJ96 Arabinose operon regulatory protein n=1 Tax=Lent...   154   3e-36
UniRef50_C6D447 Transcriptional regulator, AraC family n=1 Tax=P...   153   6e-36
UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ...   153   6e-36
UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=C...   153   7e-36
UniRef50_C7MA05 Response regulator containing CheY-like receiver...   153   8e-36
UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte...   153   1e-35
UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia...   152   1e-35
UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=...   152   1e-35
UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=V...   152   1e-35
UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=P...   152   2e-35
UniRef50_UPI0001788DE5 transcriptional regulator, AraC family n=...   152   2e-35
UniRef50_C6J3G2 Transcriptional regulator n=1 Tax=Paenibacillus ...   152   2e-35
UniRef50_D2Q274 Transcriptional regulator, AraC family n=1 Tax=K...   152   2e-35
UniRef50_C2H081 AraC family transcriptional regulator n=31 Tax=B...   152   2e-35
UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=...   151   2e-35

>UniRef50_P31449 Uncharacterized HTH-type transcriptional regulator yidL n=55
           Tax=Enterobacteriaceae RepID=YIDL_ECOLI
          Length = 297

 Score =  410 bits (1055), Expect = e-113,   Method: Composition-based stats.
 Identities = 297/297 (100%), Positives = 297/297 (100%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN
Sbjct: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120
           SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM
Sbjct: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120

Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180
           DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD
Sbjct: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
           PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL
Sbjct: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297
           ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN
Sbjct: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297


>UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp. BAL39
           RepID=A6EEZ9_9SPHI
          Length = 306

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 13/270 (4%)

Query: 25  NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84
           N+++ G ++      Y D H+  ++  D  K  I   +  +Y  +G G    +    + +
Sbjct: 26  NILNVGHNIHPGKLKYPDPHHPNLYCFDWSKGRILEEYQLIYIAKGSGTFESEQVGSVVV 85

Query: 85  HGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM-----MDIPVGQQSVIYNGEIYNQ 138
           H   ++ L P   H Y   +   WE+YW+ F  +        D       +I+ G  +N 
Sbjct: 86  HPGTVLLLFPNIWHRYKPHDDEGWEEYWVGFNGSYASYLMQQDCFDPHAPLIHMG--FNS 143

Query: 139 ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-----DPQRRQIEKLIATL 193
           E   V   +      +        + +  Q + L+YA   +     D + + I  +   +
Sbjct: 144 EFINVFIRLIDTLKFEGVAFAQLSSSLTTQLLGLVYASALQKEKVMDRKEQVINNIRYKI 203

Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253
           H +L    ++ ++A+    S AW R+ F    G +P +Y L+ +L+ A  ++++   S+ 
Sbjct: 204 HENLSNCATLEELASQHNVSYAWFRKTFKEVVGVSPGQYQLNLKLEKAARMIRETQMSIS 263

Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           E+A    F    HFSK FK K G +PSA  
Sbjct: 264 EIAFVNGFVSEHHFSKIFKKKMGVSPSAYK 293


>UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae
           RepID=D1PMJ1_9FIRM
          Length = 285

 Score =  217 bits (553), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 103/261 (39%), Gaps = 14/261 (5%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101
           +  +    P     P + + ++    V G G   +  G   TL    +   KP  + +Y 
Sbjct: 23  NCGHEYCVPGHTWGPGVRDHYLIHLVVAGKGVYQV-GGVSHTLQEGDLFLAKPNQLITYA 81

Query: 102 CEG-LVWEQYWMEFTPTSMMDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156
            +    WE YW+ F       +    P      +++ +        +  +  S       
Sbjct: 82  ADETDPWEYYWVGFNGACANKLVQQTPFSDLHPVHHCKDPQAVREALYNIYLS--RGPEP 139

Query: 157 LAVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLHASLQQRWSVADMAATI 210
              A +T  +Y ++  +  + +           + +   I  +  +     SV D+A  +
Sbjct: 140 QCEALMTGYLYIFMAHLMKEARDAMPNVGSSSSQYVLSAIKYIQFNYSHDISVDDIAKAV 199

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             S + L R+F+   G++P +Y  + R+  A SLLK    S+ E+A ++ FFD F+FS+ 
Sbjct: 200 GVSRSHLYRVFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRV 259

Query: 271 FKHKFGYAPSAVLKNTDQHPT 291
           FK   G  PS  L   ++  +
Sbjct: 260 FKKVKGVPPSKYLATLEKEQS 280


>UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabacteroides
           RepID=A7AB39_9PORP
          Length = 306

 Score =  217 bits (552), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 62/293 (21%), Positives = 127/293 (43%), Gaps = 14/293 (4%)

Query: 18  IPLLINENVISS-----GISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72
           +P   +EN+        G   I    +Y  + + + +  +  +  I + +  VY V+G G
Sbjct: 14  LPTNNDENIWGMSISGIGFQSIDPKGSYPLKGHPIGYTFNPDRGRIIDEFALVYIVKGEG 73

Query: 73  KILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTP---TSMMDIPVGQQS 128
                N  +  +      F+ P   HSY     + W++Y++ F       +++  + + +
Sbjct: 74  TFASINCFEKKISKGDAFFIFPGQWHSYQPIANIGWDEYYVTFQGDYFEKLLNGIINRAN 133

Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP----QRR 184
            I++  + +Q +    E++    A K+    A L  I    I L+Y+  K         +
Sbjct: 134 PIFHIGMNDQIVKHFGEMLDCARAQKSGF-QAVLAGITMHTIGLIYSINKNQDYGSVSMQ 192

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           +I++    +  ++  +++  D+A +I  S +  R+ F +YTG  P +Y L  +L     L
Sbjct: 193 KIQEACVLMRENIYDKFTPEDIAESINMSYSNFRKSFKQYTGIAPHQYMLQLKLSKIKDL 252

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297
           L     S+ ++A  LNF  + +FS  F+ K G  P +  K  ++    A  ++
Sbjct: 253 LSSTEMSIQDIAMKLNFESADYFSYFFRSKTGINPLSYRKEIEKQREKAKKNS 305


>UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales RepID=A6LBM0_PARD8
          Length = 295

 Score =  214 bits (545), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 59/272 (21%), Positives = 114/272 (41%), Gaps = 11/272 (4%)

Query: 26  VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85
           V + G   I     Y    +   +    +   I N +  VY  +G G    ++ +   ++
Sbjct: 25  VTTVGYQFIPPGCAYPLSRHPEKYNFKPQTGRILNEYQLVYITKGSGYFSSQSCKSQKIN 84

Query: 86  GNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTE-- 142
              +I L P + HSY+ +    W++YW+ F    + D  V ++       ++   L+   
Sbjct: 85  AGTMILLFPGEWHSYYPDRETGWDEYWVGFRGIHI-DKRVEKKFFTKEEPLHRIGLSATI 143

Query: 143 --VAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR-----QIEKLIATLHA 195
             + E I    + + +     ++ I+   +  +Y   K +         +I +    +  
Sbjct: 144 VGLYEDILKFASEEKSGYQQMISSIVLHILGSVYYKEKNNSFTNTYVVDKINEARILMKE 203

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
           +++   S  ++AA +    +W RR+F  YTG +P +Y L  +L  A  LL     ++ E+
Sbjct: 204 NIEDPLSPEEIAARLGLGYSWFRRMFKEYTGVSPAQYQLQQKLLRAKELLTSTPLTISEI 263

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           A +L+F ++  FS  FK K G  PS     T 
Sbjct: 264 AYSLHFENAGQFSTFFKKKEGVTPSEFRDRTH 295


>UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786
           str. D14 RepID=C6IWJ9_9BACL
          Length = 284

 Score =  212 bits (541), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 98/249 (39%), Gaps = 12/249 (4%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LV 106
             P     P + + +   +   G G + ++ GE   L G       P  +  Y  +    
Sbjct: 29  CAPLHSFGPGVRDIYKIHFIHSGRGIVKVE-GETFELTGGQAFLAYPERVIFYQADEVDP 87

Query: 107 WEQYWMEFTPTSMMDIP-----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161
           W   W+ F    + +I           V+        +L E+          ++      
Sbjct: 88  WTYSWIGFNGEQVAEILSRTRLTPASPVLPMDTHLMPQLYELLNEAEESNTTRDLRLQTL 147

Query: 162 LTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWSVADMAATIPCSEAW 216
           L + +   + L+ A G  D  R Q     I + +  LH+   +  SV  +AA +     +
Sbjct: 148 LYEFMTLLVELVPASGDADSTRTQAKDAYIHRCLDFLHSHYSEEMSVGQLAAIVGLDRKY 207

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
           L  LF R TG  P++Y L  R++ A +LL+    S+ EVA ++ + D+  FSK FK   G
Sbjct: 208 LSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQDALLFSKMFKKTVG 267

Query: 277 YAPSAVLKN 285
            +PS   + 
Sbjct: 268 TSPSDYREQ 276


>UniRef50_C7PPV8 Transcriptional regulator, AraC family n=3 Tax=Sphingobacteriales
           RepID=C7PPV8_CHIPD
          Length = 306

 Score =  212 bits (541), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 15/293 (5%)

Query: 3   GKLQSSD-VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWP-RDKKKPLIAN 60
           G L+  D  + E   ++P  + +N I     L  L+ T+     R  +  RD++K  I N
Sbjct: 2   GTLKRRDGFEGEQLISLPESVWKNAIKINPVLGQLYITHIGYFPRAAFHYRDREKGCIDN 61

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGL-VWEQYWMEFTPTS 118
             + +Y   G G   + +     +  N  + +   +    Y  +    W  YW+ FT   
Sbjct: 62  --ILIYCTHGKGWYSIDD-RTFKVGMNEYVIIPATELPLRYGSDDENPWSIYWVHFTGKD 118

Query: 119 MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI------KNNLAVA--FLTKIIYQWI 170
           M     G    +Y+G  +     +  +L  +          K+NL  A   L   +  ++
Sbjct: 119 MAAFNQGFNIGLYDGPRHIHRNEKGIQLWNTMFQCLKMGFGKDNLGKANLHLYHFLATFL 178

Query: 171 CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
                  +++  R +I + I  +   L    +V ++A  +  S +    LF + TG +P 
Sbjct: 179 FPDKTPREQEQSRDRINETILYMQQHLTVALTVEELAQLVELSPSHFSTLFKKTTGMSPL 238

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            Y++  +L  A  LL      + +V   + + D +HFS+ FK     +P    
Sbjct: 239 NYFIHLKLQQACLLLYTTDMKIKQVGVAIGYDDPYHFSRLFKKSMHVSPEHYR 291


>UniRef50_C6IJ00 Transcriptional regulator n=2 Tax=Bacteroides RepID=C6IJ00_9BACE
          Length = 293

 Score =  212 bits (540), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 55/275 (20%), Positives = 107/275 (38%), Gaps = 11/275 (4%)

Query: 23  NENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82
           + N+ S G   I    +Y   ++   +  +  K  I   +  +Y  +G G +  ++G   
Sbjct: 18  DRNISSVGFEEIPPNTSYPTLNHSAGYYFNPDKGRILTEYQLIYITEGEGVLETRSGGVF 77

Query: 83  TLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYN 137
           T+    I  L P + H+Y+      W  YW+ F        M +    ++S ++   I N
Sbjct: 78  TIKRGMIFVLFPGEWHTYYPNYQTGWSHYWIGFCGPEVDSWMTNEYCSKESPVFKVGI-N 136

Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-----DPQRRQIEKLIAT 192
            E+  +          +  L    L+ ++   + LM +  K      D    +I+     
Sbjct: 137 DEIVSLFRKAIDVANEEPTLYQRVLSGLVTYLVALMCSIDKNLQVENDDFSSKIDYACVL 196

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
           +   + Q  S+ ++A       +  R+LF       P +Y+ + ++  A+ LL      V
Sbjct: 197 MKELIDQPVSMQEIAKKAGMGYSLFRKLFKEQKNYAPVQYFQNLKIQKAIELLTTTTIPV 256

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
            E+A  L+F    +FS  FK + G +P    +   
Sbjct: 257 KEIAYRLDFESPAYFSARFKKQTGKSPIEYREEFR 291


>UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides RepID=A6KXZ8_BACV8
          Length = 306

 Score =  212 bits (539), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/293 (20%), Positives = 118/293 (40%), Gaps = 11/293 (3%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           M+   Q +D K             +V + G   I     Y   ++   +    +K  + +
Sbjct: 1   MHYNDQGADFKYLIVNERDKRFGLSVTTVGFQAIRAGSVYPPRNHPDAYYFTAQKGRVLH 60

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM 119
            +  VY  +G G         + +    I+FL P   H+Y   +   W +Y++ F    +
Sbjct: 61  EYQLVYITKGRGTFASDTTPSVDISKGQILFLFPGQWHTYAPLQKTGWNEYYIGFEGPII 120

Query: 120 MDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
            ++     + ++S I +  I N+EL  +              A  +L+ I+   +  + A
Sbjct: 121 DNLVKNSFISKESQILDIGI-NEELASLFARALEVAEADKTAAQQYLSGIVLHIMGAVLA 179

Query: 176 DGKK-----DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
             +      D   ++IE     +H ++ +     ++A  +  S +W R++F  YTG  P 
Sbjct: 180 ISQNKRYEVDNAAQKIESAKIIMHENVYKDIDPEELAMKLGISYSWFRKVFKEYTGYAPA 239

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           +Y+ + +L  A  LL +   SV E+   LN+  + HF   FK +  + P+   
Sbjct: 240 KYFQELKLRKAKQLLIESSMSVKEICYELNYTSTEHFFSVFKKRTNFTPTEYR 292


>UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Tax=Bacteroides
           cellulosilyticus DSM 14838 RepID=UPI0001969580
          Length = 304

 Score =  211 bits (537), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 11/266 (4%)

Query: 28  SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGN 87
           + G  LI     Y    +   +    +K  I N +  +Y + G G  +  N +++ +H  
Sbjct: 25  TVGHQLIKPNSVYPSASHPFHYLFSPEKGRILNEYQLIYILDGKGTFVSMNKKKMQIHSG 84

Query: 88  CIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTE-VAE 145
            +I L P + HSY  +    W +YW+ F    +  + V       +  I+N  L E V +
Sbjct: 85  HMILLFPGEWHSYKPDKETGWYEYWIGFNGQDIEKL-VEVDFFRKDNPIFNIGLNENVIQ 143

Query: 146 LITSPEAIKNNLAVAF---LTKIIYQWICLMYADGKKDP-----QRRQIEKLIATLHASL 197
           L      +       F   L  I++  +   Y++ K++         QI      +  + 
Sbjct: 144 LYKQAANVAQEQTTGFQQILAGIVHLLLGYTYSEHKQNSFINMNVLDQINTAKHLIAENY 203

Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257
           +   +  D+A  I  S +  R++F +YTG +P  Y  + RL  +  LL     +  E+A 
Sbjct: 204 KTEITPKDIATKINMSYSCFRKVFKQYTGFSPSRYKEELRLQTSKELLANTTMTSQEIAF 263

Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVL 283
            + F   ++F   FK + GY+P    
Sbjct: 264 EVGFDTPYYFCILFKKRTGYSPLEYR 289


>UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=Clostridiales
           RepID=A9KN44_CLOPH
          Length = 278

 Score =  210 bits (534), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 14/251 (5%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
            Y+   P  +  P + + ++  Y V G G     N +   L    +  + P    +Y+ +
Sbjct: 27  GYQRCEPNYQWGPGVRDHYLIHYIVSGKGYYET-NHKTFPLTSGDVFLIYPDTQVTYYAD 85

Query: 104 G-LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158
               WE YW+ F+ +    I        +S + +   Y +++ +  +L    EA  N  A
Sbjct: 86  ALDPWEYYWVGFSGSDAGLILEATDFSNESPVISSCSYGEKVKD--QLYQIYEARGNEFA 143

Query: 159 VAF-LTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWSVADMAATIPC 212
            A  +   +Y  + L  +      ++       ++K I  + +      ++ D+AA +  
Sbjct: 144 NAVAMAGQLYITLSLFLSGASNHNKKHHQNLDYVQKGITYMESHFSYPITIDDVAAYVGI 203

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           S + L R F  + GK+PKEY  + R+  + +LLK    S+G +A ++ + +  ++SK F+
Sbjct: 204 SRSHLFREFKAHLGKSPKEYLSEYRIKYSCTLLKNTDLSIGAIATSVGYDNGLYYSKVFQ 263

Query: 273 HKFGYAPSAVL 283
              G  PS   
Sbjct: 264 SVKGMPPSKYR 274


>UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM
           17135 RepID=B5CXD1_9BACE
          Length = 293

 Score =  210 bits (534), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 23/289 (7%)

Query: 10  VKNETPYNIP----LLINENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVA 64
             NE    IP    L I EN ++  +    + ++  A+ HYR    R +  P      + 
Sbjct: 8   FPNEKAIVIPQENLLRIKENPMTRLLHPTDVGYYPCAEGHYR---ERTEGSP----QHIL 60

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIP 123
           +Y  +G G   +  G+  T+  N    ++    H Y       W  YW+ FT        
Sbjct: 61  IYCHEGEGWYNIGKGK-CTVKKNDFFIIEAGTPHVYAASTSHPWSIYWIHFTGEQSHLFS 119

Query: 124 VGQQSVIYNGE----IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-----MY 174
                 IY  +     +N  +    E++ + E   +   + ++T  ++  +        +
Sbjct: 120 ELFNRTIYIDDSPTARFNDRIQLFNEILVNLEMGYSIENLEYITLCLWYLLGSFRYIPQF 179

Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
            +  K   +  I+K+I  + A+L ++ ++ DMA ++  S  +L  LF + +G +P  Y+ 
Sbjct: 180 REINKPKTQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSGMSPINYFN 239

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
             ++  A  LL        E+A  L F D ++FSK F      +P    
Sbjct: 240 QLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSPKEYR 288


>UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis
           DSM 17393 RepID=B3C7N6_9BACE
          Length = 292

 Score =  210 bits (534), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 66/283 (23%), Positives = 127/283 (44%), Gaps = 19/283 (6%)

Query: 14  TPYNIPLLINENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72
           TPYNI  L  EN I+  + +  + ++ +A+ H+     R+++K    N  V +Y   GCG
Sbjct: 16  TPYNIRNLQRENNITKQLFVSHIGYYPHAENHF-----REREKGT--NENVFIYCESGCG 68

Query: 73  KILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT--SMMDIPVGQQSV 129
            +  K GE+  L  N    L   + H+Y  + +  W  YW+ F     +M    +G+   
Sbjct: 69  WVSYK-GEKYILTKNQAFILPANEQHAYGADEVNPWSIYWLHFCGEGVAMFSSIIGKAIS 127

Query: 130 IYNGEI--YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM-----YADGKKDPQ 182
           +   +   Y+       E+  + E   +   + +++  +  ++  +     + + KK  +
Sbjct: 128 LEESDKSRYDDRFQLFEEMYQNLEMGYSPENLEYVSFCLMHFLASLKYINQFREIKKVRE 187

Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242
              I+K I+ +  +++ + ++ D+A  +  S +    LF   T   P EYY   ++  A 
Sbjct: 188 TDFIQKSISFMKENMENKITLEDIAQHVGYSASHFSALFSERTSYAPMEYYNQLKIQRAC 247

Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           S L+     + E+A  L ++D FHFSKAF  +    P    + 
Sbjct: 248 SFLQFSDLKIKEIAFRLGYYDQFHFSKAFNKEMEITPKEYRRR 290


>UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius
           subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE
          Length = 288

 Score =  210 bits (534), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 111/259 (42%), Gaps = 14/259 (5%)

Query: 43  EHY--RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100
           +HY   +        P + +++V  + V G GK  + +G    L    +  L    +  Y
Sbjct: 31  DHYGAEICAKNYSFGPTVRDNYVLHFIVDGKGKFTI-DGITTQLKTGDMFILPKGKVAFY 89

Query: 101 HCEGL-VWEQYWMEFTPTSMMDIPVGQQSV---IYNGEIYNQELTEVAELITSPEAIKNN 156
             +G   W   W+ F+ +   +I    Q +     +  + ++ L ++ +L    +   ++
Sbjct: 90  QADGEHPWTYLWVGFSGSKAENILSKTQLLDHYFCHSTLESKVLDQIVKLTQFRDQKLDD 149

Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIATLHASLQQRWSVADMAAT 209
           +    LT  +Y+ +  +  +             +  I+++   +H        ++++A  
Sbjct: 150 VTELQLTAELYKLLAFLMKEFPSKAMSDSSILIQNYIKQVKKIIHTQYGNPLKISEIAKK 209

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
           +  + ++L ++F   T  + K+Y +  R++ +  LL +    + E+A+ + F D+  FSK
Sbjct: 210 LNLNRSYLYKIFKEETDYSLKDYLIQIRMEKSADLLTRTTFHISEIANAVGFPDALAFSK 269

Query: 270 AFKHKFGYAPSAVLKNTDQ 288
           AFK  FG +PS   K   +
Sbjct: 270 AFKKHFGQSPSHYRKALKK 288


>UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter
           fermentans DSM 18053 RepID=C6VZN4_DYAFD
          Length = 292

 Score =  209 bits (531), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 9/270 (3%)

Query: 25  NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84
            + ++G S +     Y +E +         +  I N +  ++  +G G    +N     +
Sbjct: 21  YLTTAGYSKVEPNQQYPNEPHPDSHKLTWNRGRILNDYYIIFITRGKGIFEAENLPPTEV 80

Query: 85  HGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPT---SMMDIPVGQQSVIYNGEIYNQEL 140
                 FL P   H Y  +    WE+YW+ F       +M+      +  +     N+E+
Sbjct: 81  SAGQCFFLFPGVWHRYKPDVKSGWEEYWLGFNGYYIRQLMNNLNFHPARPFVDIKSNKEI 140

Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK-----KDPQRRQIEKLIATLHA 195
             +   I       N      +  I  Q + ++    K      DP  R I K    L  
Sbjct: 141 LVLLHRIFDRLKAANLGYHQQIAGITLQILGILNTISKFKDYDNDPVGRLIAKAEFILQE 200

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
           S +++  V ++A+ +P   +  R+ F + TG +P +Y+L+ RL  A  LL     ++ E+
Sbjct: 201 SYEKQVDVEELASQLPMGYSAFRKAFKKITGVSPNQYHLNLRLSRARDLLINTNLNISEI 260

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
                F   F+FSK FK K G +P A  + 
Sbjct: 261 THQTGFESVFYFSKLFKKKNGLSPVAFRRR 290


>UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella oris F0302
           RepID=D1QQ68_9BACT
          Length = 291

 Score =  208 bits (530), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 57/273 (20%), Positives = 104/273 (38%), Gaps = 12/273 (4%)

Query: 26  VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85
           V + G   I     Y    +   +    ++  I N +  +Y   G G     + E+  + 
Sbjct: 20  VSTVGYEHIIPGEDYPTHGHADGYYFKVERGRILNEYQLLYITAGEGVFKSSSVEERRIK 79

Query: 86  GNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM----MDIPVGQQSVIYNGEIYNQEL 140
                 L P + H+YH  + + W+ YW+ F   +M     +  +     +Y+   Y   L
Sbjct: 80  AGDFFLLFPGEWHTYHPSKNIGWQSYWIGFKGENMDARVKNGFLSPTKPVYHVG-YMDRL 138

Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD------GKKDPQRRQIEKLIATLH 194
            ++          +       L  ++   I +MY+       GK       + +    + 
Sbjct: 139 EDLYHYALDTAQEEAVHTQRTLAGVVNLLIGMMYSLERNIELGKNQEHVNMVNRARKRIR 198

Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254
            +L++  ++  +A  +  S +  R+LF  +TG +P  Y  + RL  A  LL     SV +
Sbjct: 199 EALEENLTIQQIATDMGVSYSNFRKLFKEFTGVSPALYQQELRLQRAKELLSTTNLSVKQ 258

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +A  L F    +FS  FK K    PS   + T 
Sbjct: 259 IAYKLCFDSPDYFSAKFKAKINLRPSEFREQTK 291


>UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales RepID=D1PEF6_9BACT
          Length = 291

 Score =  207 bits (528), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 63/273 (23%), Positives = 109/273 (39%), Gaps = 12/273 (4%)

Query: 26  VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85
           + + G   I+    Y  + +   +  D +K  I + +  +Y  +G G     +  +  + 
Sbjct: 20  ISTVGREEIAPGEAYPTKGHADGYYFDLQKGRILDEYQLLYQPEGEGVFCSAHLPETKIK 79

Query: 86  GNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMD----IPVGQQSVIYNGEIYNQEL 140
              I  L P + HSYH  G   W+ YW+ F   ++ D      +  +  IY+   Y+ E+
Sbjct: 80  AGDIFLLFPGEWHSYHPSGTKGWKSYWIGFKGKNIDDRVKAGFLSPEKPIYHVG-YSNEI 138

Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLH 194
             + E        +   A   +  I+   I  MY+  +             I K    + 
Sbjct: 139 IALYEEAYKTAQEEVAFAQQTMAGIVNHLIGKMYSLERNIVLSKDTKHVDMINKARLRIR 198

Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254
            SL+   ++ ++A  +  S +  R+LF  +TG  P  Y  + +L  A  LL     S+ E
Sbjct: 199 ESLEDTLTIQEIAQELGISYSSFRKLFKEHTGFAPALYQQNLKLQRAKELLSTTDESIKE 258

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +A  LNF    +FS  FK + G  PS     T 
Sbjct: 259 IAYRLNFESPDYFSAKFKIQTGMKPSDFRNMTR 291


>UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 Tax=Pedobacter
           heparinus DSM 2366 RepID=C6XZD9_PEDHD
          Length = 294

 Score =  207 bits (526), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 10/269 (3%)

Query: 26  VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85
           V+++G + IS    Y    +      +  K  I + +  +Y  +G G     + +Q+ ++
Sbjct: 21  VLNAGYNRISKAANYPPAGHPSGHYFNWDKGRILDEYQLIYISKGTGIFESAHCKQLHIN 80

Query: 86  GNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTSMMDIPVGQQSVIYNGEI---YNQELT 141
              +I L P + H +  +    W++YW+ F    + +I        +   +    + +L 
Sbjct: 81  EGAVILLFPGEWHRFKPDPETGWDEYWVGFKGDIISNIAKKNFISPHLPLLQVGLSDQLI 140

Query: 142 EVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ------IEKLIATLHA 195
           ++   I      +       ++ +I   +  +YA  K     ++      I K    L  
Sbjct: 141 DLFSAILEKTKTEQPGYQPLISGMILHLLGEVYAKTKLQALEKEDISEILINKARILLRE 200

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
           S+    ++  +A  +  S +W R+ F  +TG  P +Y L  +++ A +LL      + E+
Sbjct: 201 SVHTNIAIEKLAEELHVSYSWFRKAFKTFTGIAPHQYLLQLKIEKAKTLLSDSTKPIKEI 260

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           A  L F  SF+FS+ FK+K  YAP    K
Sbjct: 261 AFELGFESSFYFSRIFKNKTSYAPDTYRK 289


>UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
           RepID=A7VVL0_9CLOT
          Length = 282

 Score =  206 bits (524), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 9/257 (3%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101
           +  ++   P     P + + ++  Y   G G     +G+  +L       + P  + +Y 
Sbjct: 27  NCGFQRCSPGHTWGPAVRDHFLIHYITSGKGVYDSGSGK-YSLSAGDGFLVVPNRLITYW 85

Query: 102 CE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGE---IYNQELTEVAELITSPEAI 153
            +    WE YW+ F  T    +     +  +  I++ +   +Y ++L  +  L  +  + 
Sbjct: 86  ADQSDPWEYYWVGFNGTDAERLVCEAGLSAEQPIFHYDKDSLYREKLLNIYRLNGNRPSD 145

Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
           +  +    L+ +            +K      ++K +  +  +  +   V D+AA +  S
Sbjct: 146 QARMQAGLLSFMAAMMDRRPLDIQEKKSGYEYVKKSLQFIDYNYSRSIDVDDIAANVGIS 205

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            + L RLF+++    P EY    R+  A  LL+    SVGE A +  F D  +FS+ FK 
Sbjct: 206 RSHLYRLFMKHISVPPNEYLTRYRIQKASLLLESSNLSVGEAAYSTGFSDQLYFSRVFKK 265

Query: 274 KFGYAPSAVLKNTDQHP 290
             G +PS   K + +  
Sbjct: 266 YKGLSPSQYSKRSHEKK 282


>UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium
           prausnitzii M21/2 RepID=A8SBA6_9FIRM
          Length = 286

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 99/257 (38%), Gaps = 11/257 (4%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-V 106
             P     P I + ++    V G G   +  G    +    + F +P  +  Y  +    
Sbjct: 29  CAPGQTWGPGIRDHYLIHLVVSGKGIFEV-GGRTWEVSEGDLFFARPSQLIRYTADEQQP 87

Query: 107 WEQYWMEFTPTSM----MDIPVGQQSVIYNGEIYNQELTEVAELITSP--EAIKNNLAVA 160
           WE  W+ F           +P    + +++    +     +  + +S   +       V 
Sbjct: 88  WEYSWVGFNGACAHKLAAQLPFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQDEAAMVG 147

Query: 161 FLTKIIYQWICLMYAD--GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218
           +L   I   +    A          + +   I  +  +     S+ D+A ++  S + L 
Sbjct: 148 YLYLFIAALMRETSAGKPHTASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGVSRSHLY 207

Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278
           R+F+   GK+P +Y  + R++ A  LL+    S+ EVA ++ FFD F+FS+ FK   G  
Sbjct: 208 RVFMLNVGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGVP 267

Query: 279 PSAVLKNTDQHPTDASP 295
           PS       Q    ASP
Sbjct: 268 PSKYF-AAQQDADPASP 283


>UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales
           RepID=C4ZBY6_EUBR3
          Length = 280

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 102/260 (39%), Gaps = 18/260 (6%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE----QITLHGNCIIFLKPMDIHS 99
            +    P     P   N ++  Y + G G ++  N +       +       + P  I++
Sbjct: 23  GHEQCEPGHSFGPATRNHYLFHYVLSGTGTLMADNAKGITQTYNIKSGQGFLIFPGQINT 82

Query: 100 YHCEG-LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIK 154
           Y  +  L WE  W+EF    + +      + + + +Y+    +     V E++       
Sbjct: 83  YIADDKLPWEYIWIEFDGLRVKEALTTTELTKNNPVYHTHSKDIREKLVEEMLYITRHPS 142

Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDP-------QRRQIEKLIATLHASLQQRWSVADMA 207
            +     L   +Y ++  +    K              I++ +  +  + Q   S+ D+A
Sbjct: 143 ESPY--HLIGHMYLFLDYLMQSAKSSKLVPGGKMSDFYIKEAMNYIEQNFQNDISIEDIA 200

Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267
                + ++L ++F    G +P+E+ ++ R+  A  LLK    S+ +V   + + +  HF
Sbjct: 201 GVCGINRSYLGKIFKNSVGHSPQEFLMNYRMIKATELLKLTSLSIADVGSAVGYENQLHF 260

Query: 268 SKAFKHKFGYAPSAVLKNTD 287
           S+AFK+ +G AP        
Sbjct: 261 SRAFKNIYGVAPREWRNEHK 280


>UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales
           RepID=C4ZBG0_EUBR3
          Length = 279

 Score =  203 bits (517), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 11/249 (4%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
            ++      +  P I + ++  Y + G G+  + NG   TL       + P     Y  +
Sbjct: 25  GFQSCDSLYQWGPGIRDHYLIHYIISGKGRYTV-NGSVHTLTPGDAFLVYPNTEVIYQAD 83

Query: 104 G-LVWEQYWMEFTPTSMMDIPVGQQ--------SVIYNGEIYNQELTEVAELITSPEAIK 154
               WE  W+ FT +    I               + NG    ++L  + +     E   
Sbjct: 84  AQDPWEYTWVGFTGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYDA-RGTEFEN 142

Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
                  L   +  ++    +   ++     ++K I  + A+     +V D+A+ I  S 
Sbjct: 143 ALEMTGRLYTTLALFVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIGLSR 202

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
           + L R F    G +PKEY  D R+  A  LLK    S+  +A ++ F +S +FSK F   
Sbjct: 203 SHLFRSFQSILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKI 262

Query: 275 FGYAPSAVL 283
            G +P    
Sbjct: 263 KGLSPKEYR 271


>UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=Clostridium
           RepID=B8I1T1_CLOCE
          Length = 265

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 60/278 (21%), Positives = 121/278 (43%), Gaps = 21/278 (7%)

Query: 16  YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75
           +NIPLL           LI  W +    H+          P     ++  Y V G G   
Sbjct: 2   HNIPLL--NKGFEEVNPLICGWQSCDKGHFF--------GPASREYYLIHYVVSGSGVFE 51

Query: 76  LKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGE 134
            + G++  L  +C+  ++P ++  Y  +    WE  W+ F  + + D+    ++  ++ +
Sbjct: 52  -RAGKRYPLSKDCLFLIRPYELTFYKADKENPWEYIWIGFDGSLVPDLL---KNSGFSDD 107

Query: 135 IYNQELTEVAELITSPEAIKN--NLAVAFLTKIIYQWICLMYADGKKDPQRRQI----EK 188
           I    +  ++    S + ++N  + +  FL   I++    +  +    P+        ++
Sbjct: 108 ICTMHIPSLSTTFLSMKEVENLQHSSEIFLCGKIFEMFSYLSEEFSPTPKGSTTSVYCKR 167

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
               + ++     SV  +A  +     +L R+F +YTG TP+ + ++ RL+ A  LL + 
Sbjct: 168 AKDYIMSNYANHISVESIANMLGIDRRYLCRIFYKYTGSTPQNFIVNYRLEKAAFLLSKH 227

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           G +V E   +  + D ++FSK FK K+G  PS    ++
Sbjct: 228 GYTVAEAGRSTGYDDIYNFSKMFKKKYGVPPSRYKNDS 265


>UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter
           fermentans DSM 18053 RepID=C6VUW2_DYAFD
          Length = 300

 Score =  201 bits (512), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 120/295 (40%), Gaps = 14/295 (4%)

Query: 1   MNGKLQSSD-VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIA 59
           M+   +  D    E   ++P  I ++V     +L  ++ T+     + ++   +++    
Sbjct: 1   MSNVFRRRDGFDGEKLISLPPGILKDVAQRNPALFQIYITHIGYFPKALFHY-RERRKGC 59

Query: 60  NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH-SYHCE-GLVWEQYWMEFTPT 117
              + +Y +QG G  ++ + ++  +  N  I L   D +  Y  +    W  YW+ FT  
Sbjct: 60  EDNILIYCIQGKGHYVIGD-KKFEVSANQFILLPATDQYIRYWADHDDPWTIYWVHFTGA 118

Query: 118 SMMDIPVGQQSVIYNGEI---YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY 174
            + +     Q     G +   +N++  ++   I     +  +L       +   +   M+
Sbjct: 119 GIDNFNQSLQIAPQKGPVDILFNEKTLDIWHRIYQSLEMGYSLENLANATMCLHYFTAMF 178

Query: 175 ADGKKD------PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
              +K        +   I + I  +  +L Q+ SV DMA     S +    LF + TG  
Sbjct: 179 LFPEKHLTTEGTEKTDLITETITHMRLNLDQKLSVEDMARQHQLSCSHFSMLFRKGTGMA 238

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           P +Y++  ++  A  L+      + E+A +L + D F+FS+ FK   G +P    
Sbjct: 239 PVDYFIHLKMQKACQLIYANEGKIKEIAMSLGYDDPFYFSRVFKKNMGQSPEQYK 293


>UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
           27759 RepID=A8SS64_9FIRM
          Length = 328

 Score =  200 bits (510), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 93/243 (38%), Gaps = 13/243 (5%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYW 111
           K  P +  S+V     +G G   +  G+   L       ++P +   Y   +   W   W
Sbjct: 67  KFGPYVRESYVIHIVKKGKGVFTI-GGKSYELEAGQAFIIRPGEETIYKADDDDPWSYMW 125

Query: 112 MEFTPTSMMDIPVG----QQSVIYNGEIYN------QELTEVAELITSPEAIKNNLAVAF 161
           + F      D        + S I   E  +        + E +++    E  + +  +  
Sbjct: 126 VGFHGYRAEDFIESMGYKKDSPIIKIEQMDTCATCINNMLEYSQITRINEVKRQSALMML 185

Query: 162 LTKIIYQWIC-LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
              I+          D  + P +  ++  +  +      +  + D+A  I  S + L   
Sbjct: 186 FATIMEDNTSGQQENDNVEYPSKIYVKAAVDFITEKYMNKIKIDDIADFIGISRSHLTGS 245

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           F +  G +P+EY ++ RL+ A SLL+     +  +A    + DS  FSKAFK KFG +P 
Sbjct: 246 FKKEMGVSPQEYLINFRLEKAASLLRSSKEQINIIAYQCGYEDSLSFSKAFKQKFGMSPK 305

Query: 281 AVL 283
           +  
Sbjct: 306 SFR 308


>UniRef50_C9KYS9 Transcriptional regulator n=7 Tax=Bacteroides RepID=C9KYS9_9BACE
          Length = 312

 Score =  200 bits (510), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 11/266 (4%)

Query: 28  SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGN 87
           + G   I     Y  + +   +  + +K  +   +  VY  +G G     +  +  +   
Sbjct: 42  TVGYQSIPPDSPYPLKEHPSGYFFNAEKGRVLREYQLVYITKGRGLFSSDSTPEKQVCKG 101

Query: 88  CIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTE 142
            ++ L P   H+Y       W +Y++ F   +    + +  + Q+  I    I N+EL  
Sbjct: 102 RLMVLFPGQWHTYRPLRQTGWTEYYIGFEGPAIDAIVANSFLSQEQQILEVGI-NEELVS 160

Query: 143 VAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-----DPQRRQIEKLIATLHASL 197
           +     +        A  +L+ I+   I ++ +  K          ++IE+    ++ ++
Sbjct: 161 LFSRALAVAEADKISAQQYLSGIVLHIIGMILSISKNKVFEMSDVDQKIEQAKIIMNENV 220

Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257
                  ++A  +  S +W RR+F  YTG  P +Y+ + +L  A  LL     SV E++ 
Sbjct: 221 SGNVDPEELAMRLNISYSWFRRVFKEYTGYAPAKYFQELKLRKAKQLLVGTSQSVKEISF 280

Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVL 283
            L F  + +F   FK + G  P    
Sbjct: 281 FLGFQSTEYFFSFFKKRTGLTPLEYR 306


>UniRef50_UPI0001C34C27 transcriptional regulator, AraC family protein n=1 Tax=Clostridium
           sp. M62/1 RepID=UPI0001C34C27
          Length = 262

 Score =  200 bits (509), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 107/256 (41%), Gaps = 13/256 (5%)

Query: 37  WHTY--ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94
           WH     D  +    P     P     W+  Y +QG G    + G++  +    +  ++P
Sbjct: 12  WHDINPVDCGWEACAPGHSFGPAARFYWLLHYVIQGRGAFTAE-GKESPVRAGQMFVIRP 70

Query: 95  MDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI 153
            ++  Y  +    WE  W+ FT    +   + Q++V+            +   +   E  
Sbjct: 71  FEVTYYEADRREPWEYIWIGFTCGIPLPECLLQEAVVNASRC-----GSIFSSMLEAENQ 125

Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
            +   + FL    +Q +  +  + K       +E+    L A+  +  S+ ++A  +  +
Sbjct: 126 TDGREL-FLCGKAFQLLAAL--EEKPAGGEDYVEQARTYLEANYMRDVSIGELAGKLNLN 182

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            ++   LF + TGK+P++Y  D R+  A  L+ + G S G+ A +  + D F FS+ FK 
Sbjct: 183 RSYFSTLFRKKTGKSPQQYLTDYRMGRACQLMTEHGYSPGKAALSTGYPDIFSFSRMFKK 242

Query: 274 KFGYAPSAV-LKNTDQ 288
            FG  P     + T++
Sbjct: 243 HFGVFPREYSRRQTEK 258


>UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales
           RepID=C5EK80_9FIRM
          Length = 291

 Score =  200 bits (509), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 18/262 (6%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE----QITLHGNCIIFLKPMDI 97
              +    P     P   N ++  Y + G G ++  + +       +       + P  +
Sbjct: 21  QYGWEQCEPLHSYGPYARNHYLFHYVISGAGTLMSTDSKGMTNTYHIKSGEGFLIHPKQV 80

Query: 98  HSYHCE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNG-------EIYNQELTEVAE 145
           ++Y  +    WE  W+EF    + +      +   + +Y+        E+ N+ L     
Sbjct: 81  NTYSADRDHPWEYTWLEFDGLRVKEALELAGLTMDNPVYHSNARDLSLELKNEMLYIANH 140

Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVAD 205
              SP  +  +L + FL  +           G K  Q   I +  + +  + Q   SV D
Sbjct: 141 SDQSPFHLIGHLYL-FLDYLTRSSSSRRMMRGGKL-QDFYIREATSFIEQNFQNDISVED 198

Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265
           +AA    + ++  ++F    GK+P+E+ +  R+  A  LLK    ++ ++ + + +    
Sbjct: 199 IAAFCNLNRSYFGKIFRDAVGKSPQEFLISYRMTKAAELLKLTELTIKDIGNAVGYPSQL 258

Query: 266 HFSKAFKHKFGYAPSAVLKNTD 287
           HFS+AFK  +G +P        
Sbjct: 259 HFSRAFKKTYGISPREWRSENK 280


>UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
           35704 RepID=B0NGA4_EUBSP
          Length = 295

 Score =  200 bits (508), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 115/288 (39%), Gaps = 9/288 (3%)

Query: 2   NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61
           N   ++   K+E    IP     N       L+   +      +       +++   A  
Sbjct: 3   NNIGKADGFKDEKYIIIPTESFANYAE--HPLVRTVYPTDVGFFPKARDHYRERKEGAEQ 60

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMM 120
           ++ +Y  +G G I ++ GE   +  +    +     H Y+ +    W   W+ F   +  
Sbjct: 61  YILIYCTEGKGTIEVE-GEVFEMRKSGAFCIPCKKGHRYYADAKDPWSILWVHFKGENTA 119

Query: 121 DIPVGQQSVIYNGEIYNQ-----ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
             P+ +  V+     ++          +  ++     + N + ++ +  +I   +     
Sbjct: 120 YFPIDEPHVVPMNSRHSDNRMMVLFNLLFRVLRRNYTLGNFIYISQVLSLILSEVYYREK 179

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
             +   Q R +  +I  ++ +L +  ++ +++  +  S ++L  +F   TG++P E+++ 
Sbjct: 180 VDESSVQDRHVTMVIRFMYENLTRSLTLEEISEEVQLSRSYLNTIFKNQTGRSPVEFFIH 239

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            ++  A  LLK     + EV+  L + D ++FS+ FK   G +P    
Sbjct: 240 LKMQEACKLLKNTNLYIYEVSSRLGYEDQYYFSRIFKKVVGVSPKDYK 287


>UniRef50_UPI0001788616 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788616
          Length = 297

 Score =  200 bits (508), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 59/294 (20%), Positives = 112/294 (38%), Gaps = 13/294 (4%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           M+   +    +++    +P  I +    +  SL+   H     ++       +++P  + 
Sbjct: 1   MDTIRKPDGFESQKIIVLPDHIMKEA--ARHSLVEPLHVTDVGYFPRALHHYRERPEGSG 58

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPTSM 119
           +++ +Y  +G G   L  G+  +L     + + P   H Y   E   W  YW     T  
Sbjct: 59  AYILIYCAEGEGWYRLNGGKTYSLLKGQAVVIPPDTPHEYASSEFHPWSIYWWHMKGTHA 118

Query: 120 MDIPVGQQS-------VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK---IIYQW 169
             +  G           +       +   E  EL+     + + + V+ L      I + 
Sbjct: 119 GLLFEGFTGAAEPAIVPVDQSRSIVELFQESYELLQKGYTLNHIIHVSQLAGHLAAIIRL 178

Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229
             L    G+    +  +E+ +  +   L+   S+ ++AA    S       F   TG +P
Sbjct: 179 ARLQPQRGQHQHNKHDMEQTLRFMTEHLEGHVSLKELAAYANLSIPHFTFRFKEATGYSP 238

Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            +YYL  ++  A   L   G SV E++  L F D ++FS+ FK   G +PS   
Sbjct: 239 IDYYLRLKIQRACQHLDLTGESVKEISHRLGFQDPYYFSRLFKKIMGKSPSEYR 292


>UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=Clostridium
           perfringens RepID=B1BNT9_CLOPE
          Length = 285

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 19/253 (7%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKN-----GEQITLHGNCIIFLKPMDIHSYHC 102
             P     P + N+++  Y + G GK    +      +   +       + P +I SY  
Sbjct: 27  CDPLHSVGPTVKNNYLFHYVISGKGKFFSVDPKTFEKKYYEVSPGEGFLICPNEICSYQS 86

Query: 103 E-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
           +    W   W+EF        M +  +   + I+  +     L  + E+ +     K N 
Sbjct: 87  DENDPWHYMWIEFNGIKAKLYMEEAGLTPANPIFKLKESINSLKIIEEMKSIISNNKKNP 146

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRR-------QIEKLIATLHASLQQRWSVADMAATI 210
             +FL   +Y +I  +                   I + +  +  +  +  SV D++   
Sbjct: 147 --SFLIGHLYLFINSLIEFSLNSTLNELDTLNELYIREALNFIEENYNRNISVEDVSNRC 204

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             S+++  R+F ++   TP+E+ +  ++  A +LLK +  S+ +VA+ L + + F+FS A
Sbjct: 205 NLSKSYFTRIFKKHMNTTPQEFLIQYKMLQACNLLKDKSLSISQVAELLGYSNQFNFSVA 264

Query: 271 FKHKFGYAPSAVL 283
           FK KF  +PS   
Sbjct: 265 FKKKFNLSPSKWR 277


>UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           beijerinckii NCIMB 8052 RepID=A6M1S5_CLOB8
          Length = 286

 Score =  198 bits (504), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 102/258 (39%), Gaps = 19/258 (7%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQ------ITLHGNCIIFLKPMDIHSYH 101
             P     P + N ++  Y + G G++   N          T+       L P  I++Y 
Sbjct: 27  CDPLHSFGPTVKNHFLFHYVLSGKGRLYSFNKGTQNDSSIYTIKAGEGFLLTPNIINTYE 86

Query: 102 CE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAE----LITSPEA 152
            +    W   W+EF        + +I +  +++I+  + YN +   + +    L+ +P A
Sbjct: 87  ADKDDPWNYVWVEFEGLKAQRYLEEIGLSSKNLIFTPKEYNNDDNSIKDNLMFLLNNPSA 146

Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ---IEKLIATLHASLQQRWSVADMAAT 209
             ++  +  L    Y  +     +  K     Q   + + I  +  +     SV ++A  
Sbjct: 147 -PDSAILGHLYLFFYALLENSSFNNTKSASNLQEFYVREAINYIEKNYNNNISVENIAKW 205

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
                ++  ++F      TP+E+ +  RL  A  +LK    S+ E+++   + + FHFS+
Sbjct: 206 CNLDRSYFGKIFKNSMKTTPQEFLIKYRLSKACEMLKDNNISIREISELTGYPNQFHFSR 265

Query: 270 AFKHKFGYAPSAVLKNTD 287
           +FK  +  +P        
Sbjct: 266 SFKEVYNMSPRQWRNQNK 283


>UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridium butyricum E4 str.
           BoNT E BL5262 RepID=C4IHE3_CLOBU
          Length = 285

 Score =  197 bits (502), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 112/249 (44%), Gaps = 14/249 (5%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-V 106
             P     P I + ++  Y ++G G  L+ NG+   LH N    + P DI  Y  +    
Sbjct: 30  CTPSHSFGPAIRDHFLIHYIIEGSGTFLV-NGKLYKLHKNQGFIIFPDDITYYEADNHTP 88

Query: 107 WEQYWMEFTPTS----MMDIPVGQQSVI--YNGEIYNQE----LTEVAELITSPEAIKNN 156
           W   W+ F        +    + +++ I  Y+ + + +E    + + ++L  + E     
Sbjct: 89  WIYKWVGFKGIKAEYYLQCAGLTKENPIFEYSNDKFLEECFDNMIKASKLKYASELKLQG 148

Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216
           L   FL+++I   +  + +      +   I+K +  +  +  ++  ++++AA +  +  +
Sbjct: 149 LLSIFLSELI--ELSSIDSSSDYYYKDVYIKKCLNYIEMNYSRKLLISEIAALLGLNTKY 206

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
              +F    G TP++Y +  R++ A  L+K    S+ +++ ++ + DS  FSK FK + G
Sbjct: 207 FSLIFKESIGVTPQQYIISFRVNKACELMKNFKLSICDISRSVGYDDSLAFSKIFKKQKG 266

Query: 277 YAPSAVLKN 285
            +P    + 
Sbjct: 267 MSPKKYREQ 275


>UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=Bacillus
           cellulosilyticus DSM 2522 RepID=D2LQR6_BACS4
          Length = 302

 Score =  197 bits (502), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 106/262 (40%), Gaps = 14/262 (5%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLV 106
             P     P+  N ++  Y ++G G IL  +G+   +  N    + P +I  Y  +    
Sbjct: 34  CDPYHSYGPISRNEYLLHYVIKGKG-ILKADGKTYHIGENDAFLIYPSEITYYEADKDDP 92

Query: 107 WEQYWMEFTP----TSMMDIPVGQQSVIYNGEI------YNQELTEVAELITSPEAIKNN 156
           W   W+ F      + +++    +++ +   E       Y   +   ++L  S +  +  
Sbjct: 93  WTYIWIGFDGMKAESCLINASFSKENRVSKFECGETLVHYLNGMLSASKLTYSNDLKREG 152

Query: 157 LAVAFLTKIIYQWICLMYADGK--KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
               FL+ +I +         +    P    +E  +  +  + +++  V D+A  I  + 
Sbjct: 153 YLYMFLSALIQEKTDNNSDKPEVYDYPFLVYVEHALDFISHNYEKQIKVIDIAEYIGINR 212

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
           ++L  +F +    +P+EY +  RLD A +LLK     V E+A  + + ++  FSK FK+ 
Sbjct: 213 SYLTTIFKKSLKVSPQEYLVKYRLDKACTLLKNTDLLVNEIARNVGYNNALTFSKVFKNY 272

Query: 275 FGYAPSAVLKNTDQHPTDASPH 296
           +  +P        +       H
Sbjct: 273 YKMSPKTYRTQHQELVYSNKKH 294


>UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=Clostridium
           RepID=Q0SVP8_CLOPS
          Length = 284

 Score =  197 bits (500), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 15/255 (5%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
                  P     P + N+++  Y + G G   + NG+   L  N    + P  +  Y  
Sbjct: 30  CGMEKCLPSHSYGPAVRNNYLIHYIIDGEGTYYV-NGQSYRLRKNQGFLICPNTLTYYKA 88

Query: 103 -EGLVWEQYWMEFTPTSMMDIP----VGQQSVIY------NGEIYNQELTEVAELITSPE 151
            +   W   W+ F             + + ++I+      + EIY   + E+  +  S E
Sbjct: 89  SKDNPWTYMWIAFNGIKAKKYLNYANLNEDNLIFEYTEDDSLEIYINRMFELNRMNYSNE 148

Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQR-WSVADMAATI 210
                L   FL+K+         +    +     +EK I  +  +       + D+A  +
Sbjct: 149 LEIQGLLYLFLSKLAMS--KNENSLKSNNISDFYVEKAIEFMQNNYLNPDLKITDVANFV 206

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             + ++L  LF +    +P+E+ L+ R++ A SLLK    SVG ++ ++ + D   FSK 
Sbjct: 207 GLNRSYLTHLFKKSLKLSPQEFLLNYRINEATSLLKNTNLSVGTISKSIGYNDQLTFSKV 266

Query: 271 FKHKFGYAPSAVLKN 285
           FK   G +P     N
Sbjct: 267 FKKVKGISPKTYRDN 281


>UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CX81_PAESJ
          Length = 272

 Score =  196 bits (498), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 11/246 (4%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LV 106
             P     P I + +   +  +G G + + +     L         P  + SY  +    
Sbjct: 28  CSPNHAFGPGIRDHYKVHFVHRGTGTVQIGSST-FKLTSGQAFLAYPGKVISYQADAFDP 86

Query: 107 WEQYWMEFTPTSMMDIP-----VGQQSVIYNGEIYNQELTEV----AELITSPEAIKNNL 157
           W   W+ F    + ++        ++SV    + +   L E+    A+   + +    +L
Sbjct: 87  WSYSWIGFRGEQVGEVLERTKLTSEESVFPMDKQFMPNLYELLLESADHPKNHDLRLTSL 146

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
            + FLT +I        A  +   Q   I + +  +H+   +  +V  MAA++     +L
Sbjct: 147 LIEFLTVLIDSLPSSADAGVQPRKQDTYIHRSLDFIHSHFSEPITVQQMAASLGLDRKYL 206

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
             LF    G  P++Y L+ R+D A  LL++   S+GEVA ++ + D+  FSK FK   G 
Sbjct: 207 SYLFKEAMGLPPQQYLLNYRMDRAGELLRKGEYSIGEVARSVGYQDALLFSKMFKKLKGV 266

Query: 278 APSAVL 283
            P    
Sbjct: 267 PPKLYK 272


>UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=Colwellia
           psychrerythraea 34H RepID=Q488V5_COLP3
          Length = 290

 Score =  196 bits (498), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 54/287 (18%), Positives = 109/287 (37%), Gaps = 15/287 (5%)

Query: 5   LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64
           L +  ++  TP+ +   +  + ++ G+ + ++ +      + +               + 
Sbjct: 9   LTADGIRFITPHVLVKRLQNHALAKGLFVTAMGYYPTASGHAMERKGHP-------DHIL 61

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP 123
           +Y   G G  L   G+   ++   I +L     HSY       W  YW+ F  T   D  
Sbjct: 62  IYCTAGSG-FLTMAGKTTEINSGDIFYLPAGSQHSYQASKELPWTLYWLHFDGTLANDFC 120

Query: 124 -----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178
                V ++  I       +    ++ L  S   +   +      + +  +I L+    K
Sbjct: 121 QHINIVERKFTIGVQPRVIRVFDGISHLRHSSHNLAEFIQGGHQVQALLSYIALLVQQRK 180

Query: 179 KDPQRR-QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
                    E L A +   +  +  +  +A     S+    + F + TG++P  Y+++ +
Sbjct: 181 PSAINTFDTENLRAMMQEHIHSKLDLDSLAEAAKLSKYHFSKKFKQVTGESPISYFINMK 240

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           +  A  LL     SV  VA  L + D+++FS+ FK   G AP+   K
Sbjct: 241 MQRACYLLDSTPRSVKHVASELGYHDTYYFSRLFKKNIGMAPAIYRK 287


>UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271
           RepID=C4FUL3_9FIRM
          Length = 277

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 101/279 (36%), Gaps = 18/279 (6%)

Query: 20  LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL-KN 78
             +  N+ S  +  I       D       P     P + ++++  Y + G G  L  + 
Sbjct: 6   FYVFHNISSVDLYPIQFGKEKCD-------PWHHYGPTLTHNYLFHYILSGRGSFLENER 58

Query: 79  GEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN 137
            E I L       + P  + SY  +    W   W+EF      +          N     
Sbjct: 59  HEAIQLGPGQGFLMPPNTVCSYTADQDDPWTYCWIEFNGLKAANFMRQAGLNANNLIFTP 118

Query: 138 QELTEVAELITSPEAIKNNLAV--AFLTKIIYQWICLMYADGKKDPQRR-------QIEK 188
            +   ++ +  + E I  N +   +FL   +Y  +  +    K  PQ+R        I +
Sbjct: 119 HKPMIISSIKDTLETIIRNHSQHESFLIAQLYLLVDHLIRFSKHSPQQRPNEIHSFYIRE 178

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
            I  +        SV  +A     +  +  RLF +    TP ++ L  R++ +  LL   
Sbjct: 179 AIHYIQDHYMDNPSVDQLADICHLNRNYFTRLFKQELHMTPSQFILTYRINQSCELLAST 238

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
             S+ ++AD + + + F+FS AFK   G  P    +   
Sbjct: 239 NRSIRDIADQIGYSNQFNFSSAFKRVKGMTPMEWRRRYR 277


>UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococcus
           RepID=MSMR_STRMU
          Length = 278

 Score =  195 bits (497), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 113/249 (45%), Gaps = 14/249 (5%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYW 111
              P I +++V  + ++G GK+ + N   + L    I  L       Y  +  + W   W
Sbjct: 32  SFGPTIRDNYVIHFILEGKGKLTI-NQHTLDLAAGDIFLLPKDISTFYQADLQMPWSYIW 90

Query: 112 MEFTPTSMMDIPVGQQSVI--------YNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163
           + F+ +   +I + Q S+          + ++++Q +T +    T   ++   L V  L 
Sbjct: 91  IGFSGSKAENI-LKQSSLFKRFYCHSGRSSKLFSQMMTIIQFANTPLTSVNELLMVGELY 149

Query: 164 KIIYQWI---CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
           K++   I    L + +      +  + ++   +H+       V D+A  +  S ++L ++
Sbjct: 150 KLLAALIEEFPLSHLEESNSSTKAYVNQVKKIIHSQYGSSLRVNDIAKKLNLSRSYLYKI 209

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           F + T  + KEY L  R+  +  LL+    S+ E+++++ F DS  FSKAFK+ FG +PS
Sbjct: 210 FRKSTNLSIKEYILQVRMKRSQYLLENPKLSIAEISNSVGFSDSLAFSKAFKNYFGKSPS 269

Query: 281 AVLKNTDQH 289
              K    +
Sbjct: 270 KFRKEIQNN 278


>UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bacteroides fragilis 3_1_12
           RepID=UPI0001B4A5A3
          Length = 302

 Score =  195 bits (497), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 126/296 (42%), Gaps = 29/296 (9%)

Query: 10  VKNETPYNIPLLINENVISSGISLIS-----LWHTYADEHYRVIWPRDKKKPLIANSWVA 64
             N+    +P  I + ++ + ++ +       ++ +A  HYR      ++        + 
Sbjct: 17  FTNQRAIVLPEAIKKILVGNELTNLLYVTDIGYYPHATGHYRARRYGSQQ-------HIL 69

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP 123
           +Y  +G G   +  G++  +  +    ++    H Y   E   W  YW+ FT      + 
Sbjct: 70  IYCTEGEGWYSIH-GQRQKVCKDQFFIIEAGLPHIYAASENSPWSIYWLHFTGEK-SHLF 127

Query: 124 VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF-LTKIIYQWICLMY--ADGKKD 180
               + ++  +        + + +   E I  NL + + +  + Y  +CL +  A  K  
Sbjct: 128 NSFYNKLHKIDESPN--ARIKDRMQLFEEIYQNLEMGYSIENLEYTTLCLWHFIASFKFV 185

Query: 181 PQRRQIEKL---------IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
            Q R+I +          I+ +  +++++ S+ D+A ++  S +   ++FL+ +G TP  
Sbjct: 186 SQFREINRAKQGDVTQEAISYMRKNIEKKLSLDDIAGSVNYSSSHFGQVFLKKSGYTPLN 245

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           Y+   ++  A  LL      + E+A+ L F+D +HFSK F  + G  PS+  K   
Sbjct: 246 YFNQLKIQKACQLLDFSDLKIKEIAEQLGFYDQYHFSKVFYKQIGETPSSYKKRNK 301


>UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28MQ0_JANSC
          Length = 313

 Score =  195 bits (497), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 9/269 (3%)

Query: 28  SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQ-ITLHG 86
           S+G + ++ +  Y    +       K +  +  ++  V+  +G G++ L +G +   +H 
Sbjct: 36  SAGFTQVAPYAVYPAGTHPKDHLFSKTRGRVLQAYQIVFISKGRGRVELGSGRKAQEIHA 95

Query: 87  NCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPT----SMMDIPVGQQSVIYNGEIYNQELT 141
             +  L P   H Y  E  + W ++W+E   T    S+    +     I     +     
Sbjct: 96  GQVFVLFPNVWHRYAPEPSVGWTEHWVECKGTAFDMSLNAGLLDPGRPIIRHPNFEAVHD 155

Query: 142 EVAEL--ITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ 199
             AE+  +   +A+ N   ++ L+  +   +     +  +D   R +      L      
Sbjct: 156 TFAEIHGLAGTDAVGNQPVLSMLSLKLLAILA-GPRNANEDSTNRLVNSARMILLEHCTG 214

Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259
           +  + D+A  +  S + LRR F   TG + K+Y +  R+  A  LL     SV  VA  L
Sbjct: 215 QRPMEDIADELNVSYSTLRRTFRVQTGMSMKDYQMAMRIQKAKDLLDNTELSVKGVAGQL 274

Query: 260 NFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
            F  +FHFS  F+   G  PS       Q
Sbjct: 275 GFSSAFHFSSQFRKTVGCPPSDWRARLGQ 303


>UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS family) protein n=1
           Tax=Paenibacillus larvae subsp. larvae BRL-230010
           RepID=UPI0001692C08
          Length = 288

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 104/252 (41%), Gaps = 15/252 (5%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105
               P  +  P + + ++  + + G G  +   G+++ L       ++P ++  Y  + +
Sbjct: 28  SQTRPGHQIGPRLCDYYLMHHVISGKGIFMY-RGKELELKAGDTFLIEPEELVRYEADQV 86

Query: 106 -VWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAEL-------ITSPEAIKNNL 157
             W   W+ F    + +             ++ ++   V+EL       +   +   +  
Sbjct: 87  NPWMYRWVAFQGKGVPEALEKTGFSSSRCIVHTRDNQNVSELFSTILSVLQDKKEGAHQK 146

Query: 158 AVAFLTKIIYQWICLMYADG-----KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
           A+ +L  +  +    +Y              R ++K I  L     +  S+  MA  +  
Sbjct: 147 ALGYLYVLFGELCEAIYPKTGIGMRTSSESGRTVQKAIHYLSTQYAEDISIETMADNLGY 206

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ-GNSVGEVADTLNFFDSFHFSKAF 271
           + A+L R+F + TG TP  + L  R+D A  LL+Q+   ++ ++A ++ F D  +FSK F
Sbjct: 207 NRAYLSRIFKQETGLTPVTFLLKLRIDKARFLLRQRMELTIEQIASSVGFHDPLYFSKQF 266

Query: 272 KHKFGYAPSAVL 283
           K  +  AP+   
Sbjct: 267 KRFYKCAPTEYR 278


>UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n=2 Tax=Bacteria
           RepID=B5JKR3_9BACT
          Length = 301

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 16/265 (6%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
            HY        K+     + + +Y + G G   L   ++I +     I +     H+Y  
Sbjct: 39  GHYPEARNHLVKRDQGCPNHILIYCIGGQGWYSLNGEKRIPVQAGQAILIPAKSPHAYGS 98

Query: 103 -EGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161
            EG  W  YW+ F+ T    +         N  IY   L   A +IT+ E          
Sbjct: 99  TEGQSWRLYWIHFSGTEADGLFNFLSDERTNALIY---LPHHASIITAFEDAIRWTQREH 155

Query: 162 LTKIIYQW------ICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAAT 209
              +++ +      +  + A+GK+    R      ++   I  +  +L+   S+  +A+ 
Sbjct: 156 SKSVLHAFAGSCSRLLGIIAEGKRPNSSRARFVEERVRSTITRMRETLRSPLSLEQLASE 215

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
              S      LF + T  +P + Y   R+ LA  LL      + EVA+T  + D+++FS+
Sbjct: 216 ACLSVPHYSALFKKQTSSSPIQMYSQMRIQLACELLHNTDLGIKEVAETAGYEDAYYFSR 275

Query: 270 AFKHKFGYAPSAVLKNTDQHPTDAS 294
           AFK   G  PSA   + D+   D S
Sbjct: 276 AFKKVMGCPPSAYRNSLDKRQRDPS 300


>UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CVH4_PAESJ
          Length = 287

 Score =  195 bits (495), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 111/257 (43%), Gaps = 16/257 (6%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWE 108
           P  ++ P + + ++    ++G G+     G+   L       ++P  + SY       W 
Sbjct: 32  PSHQRGPKVYDFYLMHTVLEGKGEFTC-GGKSYPLQAGDTFLIEPEALVSYISNADEPWL 90

Query: 109 QYWMEFTPTSMMDI----------PVGQQSVIYN-GEIYNQELTEVAELITSPEAIKNNL 157
             W+ F      ++          PV + + I   G +YN   +   +   +        
Sbjct: 91  YRWVAFNGPQAAELAQAAGFSVANPVAETAAIRRVGVLYNHIFSIFRKNDPAAHLKAAGY 150

Query: 158 AVAFLTKI--IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
               L +   +++      A    D   + I+++I  L     Q  S+  MA +   + A
Sbjct: 151 LQLLLAEFCTVHKLSEDNAAMTNMDDTDKLIQQMIHYLSTQYAQPVSIEQMAESFGYNRA 210

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ-QGNSVGEVADTLNFFDSFHFSKAFKHK 274
           +L R+F RYTG++P  + L  R+D A  ++++ +G ++ ++A ++   DS +FSK F+  
Sbjct: 211 YLSRVFKRYTGESPITFLLKLRIDKARQMIREREGLTIEQIAASVGLQDSLYFSKQFRRF 270

Query: 275 FGYAPSAVLKNTDQHPT 291
           +G +PSA  ++  Q  T
Sbjct: 271 YGLSPSAYRESMRQMKT 287


>UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
           15053 RepID=C0C0R7_9CLOT
          Length = 322

 Score =  195 bits (495), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 111/280 (39%), Gaps = 9/280 (3%)

Query: 10  VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69
            K+E    IP     +       L+   +      +       +++   A  ++ +Y  +
Sbjct: 38  FKDEKYIIIPTESFSDYAE--HPLVRTIYPTDVGFFPRARAHYREREDGAQQYILIYCTE 95

Query: 70  GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQS 128
           G G I +++     +  +    +     H Y+ +    W   W  F     +  P+ +  
Sbjct: 96  GKGCIEVED-RTYHIGRSDAFCIPKGRRHKYYADPEDPWSILWAHFKGEVTLCYPLEECR 154

Query: 129 VIYNGEIYNQ-----ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR 183
           V++     +          +  ++     + N + ++ +  +I   I       +   Q 
Sbjct: 155 VVHMNSRQSDNRMMVLFKLLFRVLERNYTLGNFIYISQVLSLILSEIYFREKTDESTVQD 214

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
           R +  +I  ++ +L++  ++ +++  +  S ++L  +F   TG++P E+++  ++  A  
Sbjct: 215 RHVTMVIRFMYENLKRSLTLEEISEEVKLSRSYLNTIFKTQTGRSPVEFFIHLKMQEACK 274

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           LLK     + EV+  L + D ++FS+ FK   G +P    
Sbjct: 275 LLKATDMYIYEVSSELGYEDQYYFSRIFKKVVGVSPRDYK 314


>UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=Leptotrichia
           buccalis C-1013-b RepID=C7NB33_LEPBD
          Length = 283

 Score =  195 bits (495), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 10/255 (3%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
            Y    P  K  P   + ++  Y   G G      G+   L      F++P +I  Y  +
Sbjct: 21  GYEETKPLHKYGPTTRSGYMLHYIKSGKGTFYS-RGKTFHLKAGEFFFIEPEEIIWYEAD 79

Query: 104 G-LVWEQYWMEFTPTSMMDIP----VGQQSVIYN----GEIYNQELTEVAELITSPEAIK 154
               W  YW+ F    + +      V +   I++    G+I   ++ E+ E+    E   
Sbjct: 80  EYEPWAYYWIGFRGNMVSEYLRRTSVNKNKPIFSAQKGGDIIRDKIVEIFEISVISEDND 139

Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
             L    L  + Y   C      KKD +   + K +  +  +      ++++A  +    
Sbjct: 140 LLLNARLLEILYYLSECFPLTYAKKDSKNTILAKALQIMRNNFDTSVHISEIAKALYIDR 199

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
            +L R+F       PK+Y  + R+  A  LL Q    V  +A ++   D+ +FSK FK+K
Sbjct: 200 TYLHRIFKEKMKIAPKDYLTNLRIAKAKELLTQTDYPVNIIAQSVGIEDAQNFSKLFKNK 259

Query: 275 FGYAPSAVLKNTDQH 289
              +P    K+    
Sbjct: 260 ENISPINYRKSYKNS 274


>UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon transcriptional
           regulator, putative n=29 Tax=Firmicutes
           RepID=A3CML2_STRSV
          Length = 290

 Score =  194 bits (494), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 16/258 (6%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
            Y    P     P I +++V  Y  +G G+   K G+ + L    +  LKP ++  Y  +
Sbjct: 34  GYEECTPSYSFGPAIRDTYVLHYITKGKGQFHYK-GKIVDLKAGDLFLLKPNELTFYQAD 92

Query: 104 GL-VWEQYWMEFTPTSMMDIPVGQQS-----VIYNGEIYNQELTEVAELI--TSPEAIKN 155
               W  YW+  T   + D     Q      ++ N E     + ++ E +   + +   N
Sbjct: 93  KEEPWSYYWLGMTGGRVYDYFNHSQIAEDCYLLANQERKTDRIGKIVENLVYFAEQTKSN 152

Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQR-----RQIEKLI-ATLHASLQQR-WSVADMAA 208
            LA   +   +Y+ I  + +   K         +Q+       +         S+ DMA 
Sbjct: 153 QLAQLHIMGQLYELIFHLGSVAYKPQANTLSASQQLYLACKQIIDTQYPNPNLSIQDMAI 212

Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268
            +    ++L  +F      +PKEY    R+  A  LLK     V  +A ++ F D  +FS
Sbjct: 213 KLSVHRSYLTTIFKEEHQSSPKEYLEYVRMHRAKQLLKSTREPVQFIAYSVGFSDPLYFS 272

Query: 269 KAFKHKFGYAPSAVLKNT 286
           KAFK  FG++PS+  + +
Sbjct: 273 KAFKKYFGFSPSSFREQS 290


>UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptococcus
           RepID=C5VY46_STRSE
          Length = 278

 Score =  194 bits (493), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 94/253 (37%), Gaps = 13/253 (5%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL-LKNGEQITLHGNCIIFLKPMDIHSYHC 102
                 P     P +   ++  Y + G G      +  +  L       + P  I SY  
Sbjct: 24  GMEACKPLHSFGPTMKQHYLFHYIISGSGTFYDTSDQREYHLTAGQGFLISPDAICSYEA 83

Query: 103 E-GLVWEQYWMEFTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAELITSPE 151
           +    W   W+EF                  P+  Q  +        E+ ++  L     
Sbjct: 84  DEKDPWTYIWLEFDGLKTEHFLRQAGLSKEQPIFSQREMPTSSPVYHEMKQILALHHQKS 143

Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211
           A+       F++ +I   +    +   ++ +   I + I  +  + ++  SV D+A    
Sbjct: 144 ALVLGHLYLFISCLIDCSLTKTSSKHDENKEF-YIREAINFVERNYEKAISVDDLAQVCN 202

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
            +  +  RLF      +P+++ +  RL  A  LLK    ++ E+A+ + + + F+FS AF
Sbjct: 203 LNRHYFSRLFKEQMNISPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSNQFNFSTAF 262

Query: 272 KHKFGYAPSAVLK 284
           K  +  +P+   K
Sbjct: 263 KRHYQISPNRWRK 275


>UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium
           cellulovorans 743B RepID=C5RL17_CLOCL
          Length = 282

 Score =  194 bits (493), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 100/254 (39%), Gaps = 16/254 (6%)

Query: 47  VIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-L 105
              P     P +   ++  Y   G G   + NG    L       + P DI +Y  +   
Sbjct: 28  TCIPNHTWMPNLKERFLIHYIFSGKGSFEI-NGYTYNLESGQGFLISPGDIATYKADDKD 86

Query: 106 VWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161
            W   W+EF        +  I +  ++ +++ +   ++L E +         K+      
Sbjct: 87  PWTYAWVEFNGRLSEKFLHQIGLSSKTPVFSCK--KKDLLEASFQYIFDACKKSRNNNLL 144

Query: 162 LTKIIYQWICLMYADGKKDPQRR--------QIEKLIATLHASLQQRWSVADMAATIPCS 213
           +   +Y ++ +++     +   +         I + +  +  +  +   +++MA  +  +
Sbjct: 145 ILSSLYHFLAMIHEASAPEQTEKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLSLN 204

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
             ++  LF    G TP+ Y ++ R+D A  L+K    ++GE++  + + D   FS+ FK 
Sbjct: 205 RNYMSTLFKESVGITPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMFKK 264

Query: 274 KFGYAPSAVLKNTD 287
            FG  P     + +
Sbjct: 265 LFGIPPKNYRNSIN 278


>UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=Serratia
           RepID=A8GGG4_SERP5
          Length = 282

 Score =  193 bits (490), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 12/254 (4%)

Query: 51  RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQ 109
                P +   ++  Y + G G +  + G    +       + P D+ +Y  +    W  
Sbjct: 28  GHSFGPAVRQHYLFHYVISGTGVLHSEYG-AFPVVAGEGFLIHPHDVTTYRADKKDPWHY 86

Query: 110 YWMEFTP----TSMMDIPVGQQSVIYNGEIYN---QELTEVAELI-TSPEAIKNNLAVAF 161
            W+E           +  + +Q  IY     +   Q L+ + +L+    E     L +++
Sbjct: 87  MWLEVDGLVAGKIFEECRLSRQFPIYRPRKTDETPQALSYLRQLVSHDDEHRLKTLGLSY 146

Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
           L         L  +D     + + + K +  +     +  ++  +AA    + ++L RLF
Sbjct: 147 LFFSALIDNALQGSDEHPSDKTQHLHKAVKLIENRYHEHLTIERLAAYCNINRSYLCRLF 206

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
               G  PKEY L+ R+ LA SLL+    ++  V  ++ + +  HFSKAFK   G +P+ 
Sbjct: 207 KGAYGIGPKEYLLNFRMTLATSLLRNSRTAIKVVGISVGYENQLHFSKAFKQVHGVSPAQ 266

Query: 282 VLKNTDQHPTDASP 295
                +  P +ASP
Sbjct: 267 WR--QENQPDNASP 278


>UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus
           halodurans RepID=Q9KAQ8_BACHD
          Length = 287

 Score =  193 bits (490), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 108/267 (40%), Gaps = 19/267 (7%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             Y   +P  K  P + + ++    ++G G      G+  +L      F+ P ++ +Y  
Sbjct: 23  SGYSQTFPYHKVGPQVHDYFLLHVVLRGKGSFHCA-GKTYSLSAGDSFFIYPKELVTYES 81

Query: 103 EG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNG------------EIYNQELTEVAELITS 149
           +    W   W+ F      +          +             +++    + + EL  +
Sbjct: 82  DRTDPWYYTWVAFQGPFFEETLRSAGIQPESPIVSLGGKGSMIKQLFYDLYSSMTELKVA 141

Query: 150 PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAA 208
                N      +++ I Q   L     K+D Q  + I+ +I  L     +  S+  +AA
Sbjct: 142 SSLKTNAYLRLIISEFIEQTTILDEHSQKEDHQLDQHIQDVIRLLSLRYFEPLSIETIAA 201

Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268
           +   +  +  + F  YTG +P +Y L+ R+  A +LL++   ++ EVA ++ + D  +FS
Sbjct: 202 SYGYNRTYFSKKFKEYTGYSPSKYLLNIRMKKAEALLQKS-LTIQEVASSVGYRDPLYFS 260

Query: 269 KAFKHKFGYAPSAVLKNTDQHPTDASP 295
           K FK   G APS       QH  ++ P
Sbjct: 261 KQFKQWSGVAPSVFR---QQHLKESEP 284


>UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostridiales
           RepID=C0BFD5_9FIRM
          Length = 305

 Score =  192 bits (489), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 103/258 (39%), Gaps = 16/258 (6%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             +    P     P    +++  Y ++G G   +    +  L       ++P  +  Y  
Sbjct: 22  CGFAECKPLHSYGPAARPNYILHYVMKGKGIYQVGE-TKYPLKEGQAFLIEPESLTFYQA 80

Query: 103 EG-LVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEV-AELITSPEAIKNN 156
           +    W   W+ F  T     + D+ +  + +    E Y +EL E+  E++    +   N
Sbjct: 81  DKTDPWSYLWVGFGGTEAQRFVRDLGLNSRQLTCECE-YGEELKEIVFEMLHHTCSTAEN 139

Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATI 210
           L   +L   +YQ+  ++    +             +++ IA +     Q+ +V D+A  +
Sbjct: 140 LY--YLQGKLYQFFSVLARGIEIQQYSNDTKESIHVQEAIAYIKNYYSQKITVEDIANYL 197

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             + ++L  +F+   G +PKE+  + R+      L     SV E+A +  + +S  F K 
Sbjct: 198 ALNRSYLYTIFMNSLGISPKEFLTEFRISRGKEQLALTDLSVEEIAVSCGYRNSLAFGKV 257

Query: 271 FKHKFGYAPSAVLKNTDQ 288
           FK K G  P+    +  +
Sbjct: 258 FKQKMGMTPTQYRNDNRK 275


>UniRef50_B8FW52 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium
           hafniense RepID=B8FW52_DESHD
          Length = 282

 Score =  192 bits (489), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 59/292 (20%), Positives = 116/292 (39%), Gaps = 31/292 (10%)

Query: 3   GKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW 62
           G L+ S+    TP N+   +   +I +G         + D++Y V   +        +S+
Sbjct: 7   GVLEGSEYYFFTPSNLAKSLFFYLICTG-------KFFCDQNYNVEREK-------YSSY 52

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDI 122
           + ++ V+G G +   N    T   N +I L   + H Y+     W   W+ +      ++
Sbjct: 53  LLMFVVKGQGTVCY-NDRIYTAKENDLIILNCHNPHRYYTNTE-WTTLWLHYDGNISKEL 110

Query: 123 P------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL---- 172
                   G    + N  I  + L  + E   +   +   L   ++ +++ + + L    
Sbjct: 111 FDLIYDRFGCVISLSNLLIIPKYLNRILEDARAGSPLSEPLMSCYIQRMLSELLMLSDDF 170

Query: 173 -MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
            +    K DP    + + IA +  + +++ S+  +A+ +  S     R F + TG +P E
Sbjct: 171 ILPESDKSDP----VLEAIAFIETNFKEKLSLKVIASHVNMSSFHFARTFKKDTGYSPYE 226

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           Y +  RL+ A  LLK+    + E+A    F    +F   F +  G  P    
Sbjct: 227 YVVKTRLNHAKMLLKKTNLQIKEIAAECGFSTESNFVVNFHNNIGVTPGEFR 278


>UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           cellulovorans 743B RepID=C5RH22_CLOCL
          Length = 278

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 102/273 (37%), Gaps = 11/273 (4%)

Query: 20  LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNG 79
           ++    +IS  I+  +              P+    P I + ++  Y + G GK    NG
Sbjct: 2   MINERYIISESINKENRDLLVYHHGIEQCIPKHCYGPAIRDHYLIHYILAGKGKFH-ANG 60

Query: 80  EQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYN-- 132
           +   L       + P  +  Y  +    W   W+ F        +    +   ++I+N  
Sbjct: 61  KIYELVTGDGFLILPDMVTFYEADENEPWTYVWIGFRGIKAAAYLESANLNMNNLIFNCT 120

Query: 133 GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD--GKKDPQRRQIEKLI 190
            EI  +   ++          +  L   +L+ I+ + I +   D           + K +
Sbjct: 121 SEILKEYFFKIMNANLYSSGYELRL-QGYLSIILSELIDISAMDILDTNKHSDIYVRKAL 179

Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250
             +  +     SV  +A  I  +  +   +F ++ G +PKEY +  ++  A   LK    
Sbjct: 180 QYIETNYSGSTSVDAVAKAIGLNRNYFSTIFKKHIGISPKEYIIRYKIGKACEFLKNNSL 239

Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           ++ E++ ++ + D   FSK FKH  G +P    
Sbjct: 240 TISEISKSVGYNDPLSFSKVFKHIKGVSPKYYR 272


>UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter
           fermentans DSM 18053 RepID=C6VXI4_DYAFD
          Length = 298

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 114/300 (38%), Gaps = 26/300 (8%)

Query: 6   QSSDVKNETPYNIPLLI-----NENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           +S     E    IP +         +IS        ++  A  HY        ++P   +
Sbjct: 3   KSRGFDGELIIEIPKVATSHCEQLPLISHLFISRMGYYPKALHHY-------YQRPNGIS 55

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTP--- 116
             + +Y   G G I L  G Q+ +    +I L     H+Y  +    W  YWM       
Sbjct: 56  QAILLYCTDGQGWIEL-GGNQLHVRAGEVILLPTELPHAYGADTQNPWSIYWMHIAGDHS 114

Query: 117 ----TSMMDIPVGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAVAF-LTKIIYQW 169
                ++MD        ++ G  +  N   T +A  +    +  N L     L   +  +
Sbjct: 115 DAAVAAVMDRDGEPARAVHVGFSDERNALFTHIASTLLKGYSASNLLQANLALPHYLSSF 174

Query: 170 ICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
           I   +   +K         EK I  +  +L    S+ ++A ++  S ++  R F + TG 
Sbjct: 175 IAPEHFGAQKPSAGAGSPTEKAILYMQENLSNSLSLDNIARSVNLSVSFFSRRFKKDTGY 234

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
            P EY+   R+  A  LL      + EVA  +   D F+FS+ FK + G +P+   KN D
Sbjct: 235 APIEYFNYLRIQKACQLLHFSTWRINEVASAIGIDDPFYFSRLFKQQMGLSPAHYRKNKD 294


>UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales RepID=A6LD39_PARD8
          Length = 297

 Score =  192 bits (488), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 30/291 (10%)

Query: 13  ETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72
           E   N PL+ +  V S G      +   A+ HY         +      ++ +Y  +G G
Sbjct: 22  EQALNNPLVADLVVHSMG------YFPKAESHYI-------DRASGCGEYLLIYCTKGEG 68

Query: 73  KILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTS----------MMD 121
             +L +G++  +  N    L     H Y   E   W  YW  F              ++ 
Sbjct: 69  WYVL-DGKRYVVPENHFFILPAEKPHQYGSSEHDPWYIYWAHFKGKKAKYISDQLQGVIP 127

Query: 122 IPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP 181
           I +   S I +   +  EL  V E  T  EA  N + ++F   I        Y + K   
Sbjct: 128 IDMDDNSRIGDRIAFFDELLNVLESGTD-EATVNYVNLSFNHLIASFLYVKTYREAKFSK 186

Query: 182 QRRQ----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
            + +    I      +  +L+ + ++ ++A+    SE+++ RLF + TG  P  Y+L  +
Sbjct: 187 SKAENTFFISLATHFMTENLENKLTLKELASHFGYSESYMYRLFFKETGYAPMNYFLHMK 246

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           +D A  LL      + +VA  L F D ++FS+ FK   G +P     +  +
Sbjct: 247 IDRACQLLLHTNMKINQVALKLGFDDPYYFSRIFKKIVGTSPKDYRHSLPK 297


>UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum
           ATCC 9817 RepID=C3WEF1_FUSMR
          Length = 285

 Score =  192 bits (488), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 98/255 (38%), Gaps = 10/255 (3%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             Y          P    +++    ++G G  ++ N ++  L       ++P  +  Y  
Sbjct: 17  CGYSECESLHSFGPASRPTYILHIVLEGKGIFVVDN-KKYFLEKGQGFIIEPNIVTFYQA 75

Query: 103 E-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV-- 159
           +    W+ +W+ F              + +       +L E+  L+      KN      
Sbjct: 76  DAKNPWKYFWIGFDGEGAEKYLRELGIIQHKPIFRTDKLDELFSLLKEMLKRKNLTLAEE 135

Query: 160 AFLTKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
             L  + Y++  L+  +       +K+     ++K+I  +  +     +V ++   +  +
Sbjct: 136 LKLQGLFYEFFSLIVEENSIEEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEYVGLN 195

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            ++L  LF +  G T +EY    RL  A  LL     S+  VA++  + D   F+KA+K 
Sbjct: 196 RSYLSTLFKKNMGITIQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFTKAYKK 255

Query: 274 KFGYAPSAVLKNTDQ 288
           K+G  P+   K   +
Sbjct: 256 KYGVTPTQHRKKDRK 270


>UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU
          Length = 267

 Score =  192 bits (488), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 101/251 (40%), Gaps = 11/251 (4%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE- 103
            +   P     P +  +++  Y + G G+  + N +   +       + P  +  Y  + 
Sbjct: 1   MQECKPNYSYGPAVRPNYLLHYCLSGQGEYHVNN-QVYQIKAGDAFLIMPNVVTYYQADQ 59

Query: 104 GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQ-ELTEVAELITSPEAIKNNLA 158
              W   W+ F  +     +    + + +++ + +  N+   T +A L  +  +  N L 
Sbjct: 60  HEPWTYLWISFDGSKTRQYLKRCNLDEHNLVVHCDYINELRETTIAILAHNKLSYSNELF 119

Query: 159 VAFLTKIIYQWIC----LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
           +       + ++     + Y D         ++K I  +  + Q+  +V ++A  +  + 
Sbjct: 120 IQGQLYTFFSFLAKSANITYNDNVAPNYNPYVDKAIEYIQNNYQEMVTVNEIADYLSLNR 179

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
           ++L  LF ++   +P+E+ L  R+  A  LL     ++ ++A +  + +   FSKAF + 
Sbjct: 180 SYLTTLFKKHLHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKAFSNS 239

Query: 275 FGYAPSAVLKN 285
              AP    K 
Sbjct: 240 HQMAPRDYRKQ 250


>UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n=2
           Tax=Oceanospirillaceae RepID=Q2BQ54_9GAMM
          Length = 304

 Score =  192 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 111/284 (39%), Gaps = 15/284 (5%)

Query: 15  PYNIPLLINENVISSGISLISLWHTYADE-HYRVIWPRDKKKPLIANSWVAVYTVQGCGK 73
           P +I  +I   VIS           Y     Y       + +    +  + +Y + G G+
Sbjct: 11  PESIRFVIPRRVISELALHPLSQGLYPLGMGYYRQASGHQMERQEHDDNLLIYCLDGEGE 70

Query: 74  ILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYN 132
            ++ +G++  +    I+ +     H+Y       W  YW+ F      D     Q    N
Sbjct: 71  AVI-DGQKTRIRSGDILLIPKGVSHTYQARKRKPWTIYWVHFHGHHAEDFAQHLQQRESN 129

Query: 133 GEIYNQELTEVAELITSPEAIKNN----------LAVAFLTKIIYQWICLMYADGKKDPQ 182
              Y   +   + L +  EA+             +  A   + I   I L+    K+   
Sbjct: 130 QRRYVMPIGIHSRLASDFEALLEARESTYNLNAYICAANQLRQILSHIALLQPLAKQKQS 189

Query: 183 R--RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
           R    IE++ + +   + ++  +  +A +I  S+    + +   TG TP  +++  +++ 
Sbjct: 190 RGGLDIERVHSLMQTHIHEQLDLDTLAESISLSKYHFVKKYKEVTGTTPINHFIQLKIER 249

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           A  LL    N + EVA  + + D+++FS+ FK   G +PS   K
Sbjct: 250 ACHLLDTTNNGINEVAFAVGYEDAYYFSRIFKKLMGVSPSQYRK 293


>UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D3B4_PAESJ
          Length = 300

 Score =  191 bits (486), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 10/242 (4%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYW 111
           + +      +  +Y   G G+    N E I +    ++   P     Y +      E YW
Sbjct: 58  RNREHGRVDFQLIYITGGKGRFRFHN-ETIEVPSGSLVVYTPGQPQHYSYQAEDGTEVYW 116

Query: 112 MEFTPTSMMDIP----VGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAVAFLTKI 165
           + FT  S  D      +  Q V   G  +       ++ + + S   + +++  A+L ++
Sbjct: 117 IHFTGYSAYDYLQQFGLLTQPVHTVGIIDDVTALFKKIIQELNSHRPLGSHMVNAYLLEM 176

Query: 166 IYQWICLMYADGKKDPQRRQ--IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
           +      +    +   Q R   I ++IA +H    +  S++D+A     S       F  
Sbjct: 177 LTLLGRRLQTAEEPGAQGRHPDINQMIAFIHEKYSESLSISDLAGECSLSVFRFIHKFKE 236

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            TG TP +Y  + R++ A  LL +    V EVA  + + +  +FS+ F+   G  PS   
Sbjct: 237 VTGMTPMKYITEIRINEAKKLLSESSLHVKEVAAVVGYDNPLYFSRIFRSTVGIPPSEYK 296

Query: 284 KN 285
           K 
Sbjct: 297 KQ 298


>UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=Lactobacillus
           RepID=C2EDY7_9LACO
          Length = 284

 Score =  191 bits (485), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 97/236 (41%), Gaps = 9/236 (3%)

Query: 58  IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTP 116
           I  ++V  Y  +GCG         + L       L       Y  +    WE  W+  + 
Sbjct: 46  IRENYVIHYIRKGCGTFSSAGRPVVELKQGDCFILPKGVPCFYQADEKDPWEYSWIGLSG 105

Query: 117 TSMMDIPVGQQSVIYN------GEIYNQELTEVAELITSPEAIKNNLAV-AFLTKIIYQW 169
               +I         N         +   L+ + E +     +KN+L   + L K+ +  
Sbjct: 106 IRTGEIFAASSISEKNYLCQIQDTEFKNSLSRLYESLHLTHNMKNSLLTESLLYKMFHDL 165

Query: 170 ICLMYAD-GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
           +    A+  +K   R Q    +  +  +     S+ D+   +  S ++L  LF ++ G +
Sbjct: 166 LDEFPAEVTRKTNSRTQFRLAVEYMRDNYDTGCSILDVCRGLSVSRSYLYSLFKKFAGSS 225

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           P+++  + R++ A  LLK    S+  +AD++ + DSF FSKAF+   G +P+   +
Sbjct: 226 PQKFLTEIRMEEAEHLLKDTDRSIQNIADSIGYGDSFTFSKAFRKSRGCSPTDFRR 281


>UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae
           RepID=C6BAA0_RHILS
          Length = 288

 Score =  191 bits (485), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 9/264 (3%)

Query: 27  ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL-KNGEQITLH 85
           IS+G + I     Y    +         +  I +++  V    G G++        +T+ 
Sbjct: 22  ISTGYTEIGPNSDYPPSRHPDDHHFSWSRGRILSAYQIVQISAGSGRLEFGPERRPVTIA 81

Query: 86  GNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMM-----DIPVGQQSVIYNGEIYNQE 139
              I  L P   H +  +    W ++W+E   ++        +   +     +    +  
Sbjct: 82  EGSIFLLFPGVWHRFAPDRRTGWVEHWIECRGSAFDFARDAGLLRPELPAHASSSEISGV 141

Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ 199
              +  L    + ++N   ++ L   +   IC   AD   +   R +++    L     Q
Sbjct: 142 FASIHALAQD-DCLRNQPLLSTLGLQLLALIC-RPADLNTNAVNRLVDRARMVLMERCGQ 199

Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259
             SV  +A  +  S  + RRLF   TG + K+Y +  RL  A+ LL     S+ E+A  L
Sbjct: 200 PLSVEQLADELGVSYPYFRRLFREQTGMSAKQYQMRVRLQRAIDLLVNTDKSIKEIAGLL 259

Query: 260 NFFDSFHFSKAFKHKFGYAPSAVL 283
            F  +FHFS  F+   G +P+   
Sbjct: 260 GFHSAFHFSTQFRQLIGSSPTDFR 283


>UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
           27759 RepID=A8SRM1_9FIRM
          Length = 296

 Score =  190 bits (484), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 95/253 (37%), Gaps = 8/253 (3%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
            + +  P  K  P +   ++  + ++G G   +K G    L       ++P    +Y  +
Sbjct: 23  GHSITEPLHKAGPAVKTFYLIHFVLEGEGDFYVK-GAHYHLKKGQGFLIEPDTPATYISD 81

Query: 104 -GLVWEQYWMEFTPTSMMD----IPVGQQSVIYNGEIYNQELTEVAELI-TSPEAIKNNL 157
               W   W  F+     D    I + Q   I+  E  ++    V +++  +     ++ 
Sbjct: 82  EHHPWRYVWFGFSGRCAHDTLSSIGLTQNQPIFTCEDGDKLKKYVFDMLAHNTSGHADHY 141

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216
            +  +  +    I     D  + P     +   I+ +         V +++  +  + ++
Sbjct: 142 RLMGMLYLALSVIANAQKDKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSY 201

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
              LF +YTG +P +Y  + R+  A  +L     SV  +A +  +  +  F K F+   G
Sbjct: 202 FSDLFKQYTGMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTG 261

Query: 277 YAPSAVLKNTDQH 289
            +P+A      Q 
Sbjct: 262 LSPNAYRLGKRQR 274


>UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides RepID=A6KYC9_BACV8
          Length = 298

 Score =  190 bits (483), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 32/298 (10%)

Query: 10  VKNETPYNIPLLINE----NVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVA 64
            K E    +P  + E    + + S + +  + ++ +A  HYR    RD ++      ++ 
Sbjct: 8   FKGERAIVLPAFLIEELKQDPLGSELYITDIGYYPHAYFHYRK---RDTEE---VTEFIL 61

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP 123
           +Y ++G G   L +  Q  +  N    L     H+Y   E   W  YW+ F  T      
Sbjct: 62  IYCMEGEGWFEL-DKHQYAVTANQFFILPEHQAHAYGSNEENPWTIYWIHFNGTKAAFFS 120

Query: 124 VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA-------VAFLTKIIYQWICLMYAD 176
            G         I  QE + + E +   E I ++++       + + T  ++ ++  M   
Sbjct: 121 AGFDRP---KSITPQEDSRIKERLVLFEEIYSSISFGYSKNYMLYATTSLFHFLGSMKFI 177

Query: 177 GK-------KDPQRRQ--IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
           G+       ++  R +  ++  I  +  +L +   +AD+AA +  S ++   LF   TG 
Sbjct: 178 GEYRDCGSMRNSYRNKDVVQIAIHFMQENLSKTIRLADIAAEVNLSVSYFSNLFEEKTGS 237

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           +P  Y    R+  A   L      + +++  + + DS +FS+ F    G  PSA  + 
Sbjct: 238 SPLRYLTYLRIQEACHYLDFTNLKINQISPLVGYEDSLYFSRLFTKTMGVPPSAYKEK 295


>UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=Clostridium hathewayi DSM
           13479 RepID=UPI0001C368B4
          Length = 289

 Score =  190 bits (483), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 97/240 (40%), Gaps = 11/240 (4%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWME 113
           +      +  +Y   G  + +L NG  +T+    ++   P +   Y +      E +W+ 
Sbjct: 42  RATGRPDYQLLYIASGKAEFVL-NGAAVTIPAGNMVLYGPGEYQQYTYLLEDRPEVFWVH 100

Query: 114 FTPTSMMDIPVGQQSVIYNGEI--------YNQELTEVAELITSPEAIKNNLAVAFLTKI 165
           FT     D+       + +  I        Y      +   +  P  +  + +  +  ++
Sbjct: 101 FTGYEAADLLSRTGLSLEDFRILRTGCASRYQDLFLSMIRELQLPRPLSGDFSSLYFKEL 160

Query: 166 IYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           +      +   GK  PQ ++++E  +   H +      ++D AA++  S  W  R F +Y
Sbjct: 161 LLTVERQIAEGGKNKPQIQKEMEHAVHFFHENFSADIDISDYAASLHMSTCWFIRSFKQY 220

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            G  P +Y    R++ A  LL+     V E+   + + +  +FS+ FK + G +P+A  K
Sbjct: 221 VGVPPLQYLTSIRINKAKELLESTDCPVSEIGSIIGYENPLYFSRIFKKQTGLSPAAYRK 280


>UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=Halothermothrix
           orenii H 168 RepID=B8D1C2_HALOH
          Length = 276

 Score =  190 bits (482), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 100/251 (39%), Gaps = 14/251 (5%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-V 106
             P     P + + ++  +   G G   +       L       + P  +  Y  +    
Sbjct: 28  CKPGHSYGPAVRDHYLIHFIYNGRGIFQVGENT-YHLEAGQGFLICPDIVTYYQADRHNP 86

Query: 107 WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE----LTEVAELITSPEAIKNNL---AV 159
           WE  W+ F      D  + + ++     +++      L  + E +T+   +K +     +
Sbjct: 87  WEYAWIGFHGLKAKDY-LNRANLSLANPVFSDTDGSPLRFIFEEMTAARKLKRSREIKLI 145

Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQ--IEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
             +   +   I L  +    D   ++  I+K I  +  +  +   V D+A  +    ++L
Sbjct: 146 GLIYVFLSHLIELNVSGSTPDNNSKENYIKKAIEYIEKNYSRHIKVIDIANHVGLDRSYL 205

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQ--GNSVGEVADTLNFFDSFHFSKAFKHKF 275
             +F  +   +P++Y ++ R++ A  L+K +    S+G+++ ++ + D   FSK FK   
Sbjct: 206 WSIFNEFLNTSPQQYLINYRINKACELMKNRNLNLSIGDISRSVGYKDPLTFSKTFKKTK 265

Query: 276 GYAPSAVLKNT 286
           G +P    K +
Sbjct: 266 GISPLHYQKQS 276


>UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales RepID=C7X929_9PORP
          Length = 296

 Score =  190 bits (482), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 54/282 (19%), Positives = 108/282 (38%), Gaps = 32/282 (11%)

Query: 19  PLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKN 78
           PL+ N  V   G      +H    EH               +  + +Y  +G G   +  
Sbjct: 28  PLINNLYVRKIGFFPRVKYHFLQKEH-------------GCDYAMLIYCTEGKGWYRIL- 73

Query: 79  GEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN 137
           G+Q T+     I + P   +S+  + G  W  YW+ F               +    I  
Sbjct: 74  GKQYTVEKYQYIIIPPGIPYSFGADEGDPWTIYWLHFQGKLCDQFLPSHPVPVT---ISP 130

Query: 138 QELTEVAELITSPEAIKNNLAVAFLTK-IIYQWICL-------------MYADGKKDPQR 183
            E + + + +   E I ++ ++ ++ + +IY  +CL              +       + 
Sbjct: 131 NEYSRLQDRLRLFEEIYSSFSMGYIKEYMIYSSMCLYNFLASFIYLEQFRHIMIPSQKEY 190

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
               ++I  +  ++QQ  ++ ++A+    S +    LF   TG +P  Y++  ++  A  
Sbjct: 191 PFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGETGVSPMNYFIRLKIQKACE 250

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            ++     + E+A  L F D+ +FS+ F    G +PS   K 
Sbjct: 251 YIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRKK 292


>UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family protein n=1
           Tax=Lentisphaera araneosa HTCC2155 RepID=A6DM00_9BACT
          Length = 282

 Score =  189 bits (481), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 28/288 (9%)

Query: 2   NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61
           N  L   ++  E PY +     E V+SS                   W   K+  L    
Sbjct: 12  NTNLFFKNINFELPYKLLNFGRERVVSSDYR----------------WHGLKRGKLETAI 55

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE--GLVWEQYWMEFTPTSM 119
           W   YT+ G GK+   N    T+  +  + +   D H Y  +     WE  ++ F  T +
Sbjct: 56  WQ--YTLSGSGKLRSNN-TTYTIQPHQAMLVTSPDDHEYFFDSMDSHWEFIYLSFCGTDL 112

Query: 120 MD---IPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
           +      + + S + +  I ++ ++   +L  +P    +   V   +++ YQ+I  ++ +
Sbjct: 113 VQHYKNLIAKTSPVCSLPINSKLISLFLQLTQNPHLSDSQTQVQH-SQLCYQFIMELHQE 171

Query: 177 ---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233
               K+ P  + I+ ++  ++  L Q  S+ +MA+    S     R+F +  G +P EY 
Sbjct: 172 ILADKQKPLPQAIQNVLNHINHHLNQAISIDEMASVAKLSRYHFSRVFSKAIGISPNEYL 231

Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           +  +++ A  LL  Q  SV ++A    + D  +F K FK  FG++P A
Sbjct: 232 IKTKMEYAQKLLFTQNLSVKQLAHECGYHDPSYFCKVFKKHFGHSPKA 279


>UniRef50_P43465 Raffinose operon transcriptional regulatory protein rafR n=9
           Tax=Lactobacillaceae RepID=RAFR_PEDPE
          Length = 277

 Score =  189 bits (481), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 14/252 (5%)

Query: 47  VIWPRDKKKPL-IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105
              P    K   + +S+V  Y  +G G     N     L    I  L       Y  +  
Sbjct: 24  ACLPNYTYKGNNVRDSYVIHYIQEGKGTFAAANHPATVLKAGDIFILPKGTPCFYQADND 83

Query: 106 -VWEQYWMEFTPTSMMDIPVGQQ--------SVIYNGEIYNQELTEVAELITSPEAIKNN 156
             W+ +W+ F+    ++  +             + NG IY  +L+E+ +++  P ++ N+
Sbjct: 84  QPWKYFWIGFSAGIRIEAMLSGSLLAQKCYLRQVQNGHIY-ADLSELYKVLHIPNSLIND 142

Query: 157 -LAVAFLTKIIYQWICLMYADGK--KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
            L  + + ++ Y  +    AD    K     Q    ++ L  +     ++ D+   +  S
Sbjct: 143 VLLGSLIYRLFYDLLRWYPADATNIKVKSTEQFNLAVSYLQENYSTGCTIMDLCHYLNLS 202

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            ++L  LF  +   +P++     RL+ A   L    NSV  +A+ + + DSF FSKAFK 
Sbjct: 203 RSYLYTLFKTHANTSPQKLLTKLRLEDAKQRLSTSNNSVQSIANMVGYKDSFTFSKAFKR 262

Query: 274 KFGYAPSAVLKN 285
             G +PS   K+
Sbjct: 263 YSGASPSYYRKS 274


>UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=Bacillus
           cellulosilyticus DSM 2522 RepID=D2LYQ6_BACS4
          Length = 294

 Score =  189 bits (481), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 60/287 (20%), Positives = 114/287 (39%), Gaps = 13/287 (4%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
            S ++ NET   I    +E VI + + +  +   Y   H    +  D  K    N+++  
Sbjct: 3   HSLNLPNET---IGFRTHEKVIGTLVDIHVVGKQYVHSH---DYYWDGMKRNDKNTFIFQ 56

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDI-- 122
           YT+ G G + ++        G   +   P +   Y       WE  ++     +  D   
Sbjct: 57  YTLSGEGAVFIEGKTHKVQQGQGFMLEVPGEHIYYLPSHSHHWEFIFLTLRGQAAADCWR 116

Query: 123 ----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178
                VG    I       +++  V EL      I +  A +   + + +      +   
Sbjct: 117 YVNRKVGPIINIPIESALIEQVVNVYELAFKKNLIDHYFASSKAYQFVMECYRYFKSFKA 176

Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
           K+     I + I  ++ + +  +SV D+A  I  S+ +  +LF      TP +Y    RL
Sbjct: 177 KEQMPDTITQAINFINKNYKASFSVQDVATNINLSKYYFIKLFKESMNMTPGQYITKVRL 236

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           + A++LL     +V E+A  + + D  +F+KAF+   G +P    ++
Sbjct: 237 EQAINLLSHTELTVKEIAMQVGYGDDNYFNKAFRKVVGTSPGEFRRS 283


>UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0P929_9FIRM
          Length = 279

 Score =  189 bits (481), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 96/249 (38%), Gaps = 13/249 (5%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104
           +   P     P + + ++  + + G G +   +G    +       + P  + +Y  +  
Sbjct: 28  QRCEPLYAWGPGLRDHFLVHHVIVGRG-VYTADGVTHDVKAGDTFIIYPSVVVTYSADAA 86

Query: 105 LVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160
             WE  W+ F            P  +Q  +   E  ++    +A++  +    +++   A
Sbjct: 87  DPWEYCWVGFNGAEARLMIAQTPFTRQRPVVRFEQPDEIREAIADIYRASGTTRSSELRA 146

Query: 161 FLTKIIYQWICLMYADGKKDP-----QRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
               ++Y ++ L+                 +E  I  +  +      +  +AA++  S +
Sbjct: 147 I--GMLYIFLALLIEQAGAPAPAAGLSLEYVESAIRFIAHNYSGHIDIEAVAASVGISRS 204

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
            L R+F+++    P EY    R+  A  LL      V  VA ++ + D  +FS+ FK   
Sbjct: 205 HLYRVFMQHISTPPNEYLAKFRISQACELLGHSSLPVSAVAASVGYDDPLYFSRVFKRIT 264

Query: 276 GYAPSAVLK 284
           G  PSA +K
Sbjct: 265 GMPPSAYIK 273


>UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D140_PAESJ
          Length = 296

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/298 (22%), Positives = 117/298 (39%), Gaps = 22/298 (7%)

Query: 1   MNGKLQSSDVKNETPYNIP-LLINENVISSGISLISLWH----TYADEHYRVIWPRDKKK 55
           M+  L+     ++    +P  ++ E      I  + +       YA  HYR        +
Sbjct: 1   MDRLLKEEGFPSQKLIVLPDHILAEYAAHPLIRPLHITDIGCFPYARHHYR-------HR 53

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEF 114
           P  + +++ +Y   GCG + L + +++ +    +  +     H Y   E   W  YW+  
Sbjct: 54  PEGSEAYIVMYCTDGCGWVKLDDEKRLEVRKGELTLIPAGTPHEYGSSEEEPWTIYWIHL 113

Query: 115 TPTSMMDIPVGQ------QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQ 168
                      Q         +           E  E++     + + + V+ L   +  
Sbjct: 114 KGELAFSFFGEQGKAAPVPIPVERSSAIIGLFDECYEMLLKGYTLDHVIYVSQLACHLAG 173

Query: 169 WICLMYADGKKDPQRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225
            I L+ A  +  P  R+   IEK I  +   L+   S+A++AA    S     +LF + T
Sbjct: 174 IIRLVQAHRQAAPSPRRQLDIEKAIQYMTEHLEDNVSLAELAAEAALSVPHFTQLFKKKT 233

Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           G +P +YYL  ++ LA   L     SV  V   + F D ++FS+ FK   G +PSA  
Sbjct: 234 GYSPIDYYLRLKIQLASQYLDLTDQSVKAVGIRVGFQDPYYFSRLFKKIMGKSPSAYR 291


>UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
           DSM 15981 RepID=C0CW55_9CLOT
          Length = 286

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 99/259 (38%), Gaps = 11/259 (4%)

Query: 38  HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97
             Y   H +      +    + + ++  + ++G G   L NG +  +       + P   
Sbjct: 21  SVYRTGHQQCSGGYHR-GLEVRDFYLIHFVMEGGGVYTL-NGRKHPVRKGQAFLIYPSMP 78

Query: 98  HSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156
             Y  +    WE  W+ F       +         N  I  ++   + EL+ +    + +
Sbjct: 79  IDYQADAADPWEFCWVGFNGNDARLLMNATGFTPQNPVITLKDPERMEELLMNIYRCRGH 138

Query: 157 LAVAFL--TKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAA 208
               F+  T  +Y+ +  +  +       +       +++    + +  Q   ++ D+A 
Sbjct: 139 HPHEFINMTAKLYELLAFLIQEASDPMPAQSRTGVEHVQRACDFIASHYQDPITINDIAG 198

Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268
            +    + L R+F  +   +P +Y  + RL  A +L+ +Q  +V EVA    F D  +FS
Sbjct: 199 HVGICRSRLYRVFKAHLSISPLQYLTEFRLREACNLMNRQKATVKEVAYAAGFSDPLYFS 258

Query: 269 KAFKHKFGYAPSAVLKNTD 287
             FK   G +P   +K++ 
Sbjct: 259 TVFKKSLGQSPKEYMKSSK 277


>UniRef50_A6M1I8 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           beijerinckii NCIMB 8052 RepID=A6M1I8_CLOB8
          Length = 279

 Score =  187 bits (475), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 101/250 (40%), Gaps = 7/250 (2%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             + +  P     P I + ++  Y + G GK  + N +   L       + P +   Y  
Sbjct: 22  GGHEICAPSHSFGPAIRHHYLLHYILNGKGKYYVNN-KCYELQRGEAFLICPGESTYYKA 80

Query: 103 EGL-VWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI-KNN 156
           +    WE  W+ F      T + +  + + ++I+           +  LI + E    N 
Sbjct: 81  DKEEPWEYCWVSFDGNDASTILKNCGLSKNNLIFKDNSNGIFKERLLSLIHNYEEDSHNE 140

Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216
            A+     + +  +       +K+      +K    ++ +      V+D+A  +     +
Sbjct: 141 YALIGQLYMCFSSMYDQVNIKEKNTCESYADKARDYIYNNFGYDIKVSDIAKYVGIDRTY 200

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
           L ++F+     +P++Y + +RL+ A++LL+    ++ E++ +  F D+  F K FK +F 
Sbjct: 201 LYKIFMEEYKISPQKYLISSRLNTAVNLLETTKMNITEISYSCGFKDTPTFYKHFKKQFN 260

Query: 277 YAPSAVLKNT 286
             P    K+ 
Sbjct: 261 ITPVQYRKSN 270


>UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956
           RepID=B2GEN0_LACF3
          Length = 278

 Score =  187 bits (474), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 95/251 (37%), Gaps = 11/251 (4%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWE 108
           P  K  P +   ++  Y + G G   + N     LH      + P    +Y  +    W 
Sbjct: 29  PGHKYGPAVRPYYLIHYILSGSGIFKVDNVT-YHLHAGQGFLIVPNCRTTYIADKETPWS 87

Query: 109 QYWMEFTPTSM----MDIPVGQQSVIYNGEIYNQELTEVAELIT-SPEAIKNNLAVAFLT 163
             W+ FT  S       I + +   ++N     +    V E++     +++NNL      
Sbjct: 88  YVWLGFTGKSAATWIDQINISEIRPVFNSNKSYELANCVNEILALDNLSMENNLRALSCF 147

Query: 164 KIIYQWIC---LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
                +I    ++        +   + + I  +   L  + +V  +A  +  + ++L  L
Sbjct: 148 FRFLSYIATGTVINIQQANSEKNHYVTQAIQYISHHLS-KVTVESLAHAVNLNRSYLTSL 206

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           F      TP EY  + R+  A  LL+    S+ +VA+   +  +  F++ FK  +G +P 
Sbjct: 207 FKHDLDLTPSEYIQNFRITKARHLLESSDISIDQVAEQCGYQRTNSFTRVFKRTYGISPR 266

Query: 281 AVLKNTDQHPT 291
              + T   P 
Sbjct: 267 QYRQETKIAPN 277


>UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA
           RepID=C6JEQ5_9FIRM
          Length = 301

 Score =  186 bits (473), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 107/283 (37%), Gaps = 26/283 (9%)

Query: 16  YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75
           +     + E   S  ISLI     +    +    PRD         ++  + + G G   
Sbjct: 12  FRCLENLKEG--SLDISLIHTGKEHCPPGHICSMPRD--------EFIIHFVLDGTG-FY 60

Query: 76  LKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTP----TSMMDIPVGQQSVI 130
              G+  +L    +  + P +  +Y  +    W   W+ F      + + +    +  ++
Sbjct: 61  SAGGQTWSLTPGQMFVIYPNEPVTYGADETNPWTYAWIGFRGIRAHSMVKECGFSKNQLV 120

Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLA--VAFLTKIIYQWICLMYADGKKDPQRRQ--- 185
                    L  +  ++   +  K N     A+L  ++ +          ++ +  +   
Sbjct: 121 LPAPDQKIILKHIDYMLNHKQLSKANDLRRQAYLILLLAELAGFHEKQSAQNKKNAKYAY 180

Query: 186 -----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
                +E  I  +    Q+   ++D+A  I  S A+L   F +  G + + + +D ++  
Sbjct: 181 STSVYVELAIEYIKDMYQKGIGISDIADNIGISRAYLNSSFQKELGMSAQTFLIDYKMHK 240

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           A SLL     SV E+A+ + + D   FSKAFK KFG +P    
Sbjct: 241 AASLLVSTSLSVKEIANNVGYEDQLVFSKAFKKKFGMSPKNYK 283


>UniRef50_A6VAM9 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas
           aeruginosa RepID=A6VAM9_PSEA7
          Length = 293

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 111/285 (38%), Gaps = 14/285 (4%)

Query: 5   LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64
           L +  V+  TP  +   +  + +      ++L + Y + H        + +    +  + 
Sbjct: 12  LPNQGVRFITPPRLRRALARHPLGQACYPLALGY-YPEAH------GHRMQRRTPDDHLL 64

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP 123
           +Y   G G +    GE++ + G  ++ L     H+Y  +    W  YW+ F      D  
Sbjct: 65  IYCRAGRGWLECA-GERVEVGGGDLLVLPKGLEHAYGADSQRPWSIYWVHFEGVLAEDFL 123

Query: 124 VGQQSVIY----NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK- 178
               SV             E   +  L     ++ + +  A L + +   + +  A    
Sbjct: 124 HPLGSVPRLRLGMQPRLLAEFDALLALRRQGLSLPHFIHAAHLLQGLLTSLAVRPARASL 183

Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
           K  +   I+ + A + A L    ++ ++AA    S     + +   TG+ P + ++  ++
Sbjct: 184 KSGRVLDIDAVQALMRAHLHDSLNLDELAAQFKLSRFHFAKTYRALTGQAPIQDFIQMKM 243

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
             A  LL +    V ++A+ L + D ++FS+ F+   G APS   
Sbjct: 244 AHACRLLDEGALEVRQIAEQLGYADPYYFSRLFRKVVGMAPSHYR 288


>UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D1A4_PAESJ
          Length = 284

 Score =  185 bits (471), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 12/265 (4%)

Query: 35  SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94
             +      +Y        ++P  +  W+ +YTV G G++   N   +T     I  L P
Sbjct: 14  RPYGILIAGYYNETADYAIQRPSGSRDWLLMYTVSGEGQVQKNNQSTVTCGAGDIAVLMP 73

Query: 95  MDIHSYHCEGLVWEQYWMEFTP----TSMMDIPVGQQSVIYN----GEIYNQELTEVAEL 146
              H Y  +G  WE  W+ F P    ++ + +P   + + +     G+  +     +A +
Sbjct: 74  GIPHHYGTKGTSWEFIWVHFIPDPEWSTWLRLPGSDERLFFRHVGKGDSRDSIHEALARM 133

Query: 147 ITSPEAIKNNLAVAFLTKIIYQ----WICLMYADGKKDPQRRQIEKLIATLHASLQQRWS 202
           +    +  ++     L ++  +    +I              +I +++  L  S  QR S
Sbjct: 134 VRHETSAGSSRLHRRLAEMALEETLIYIQQTCPAESAVTMDPRIAQILRELQLSPAQRIS 193

Query: 203 VADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFF 262
           + ++A     S + L  LF    G T        RL+ A  LL      + E+A  + F 
Sbjct: 194 LPELAKKSCLSTSRLSHLFKEQVGDTVLNVLCKIRLEKAAQLLTGTNRQITEIASDVGFD 253

Query: 263 DSFHFSKAFKHKFGYAPSAVLKNTD 287
            + +F++ FK  FG  PS   +   
Sbjct: 254 CTIYFTRKFKETFGETPSTYRRREQ 278


>UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bacteroides plebeius DSM
           17135 RepID=B5CYP4_9BACE
          Length = 297

 Score =  185 bits (471), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 10/268 (3%)

Query: 28  SSGISLISLWHT--YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85
           + G ++I   +        +   +  +  K  +   +V +Y  +G G       E + + 
Sbjct: 27  TVGSAIIHPNYESYPPICGHPTEFTFNPSKGRLLPIFVQLYIAKGKGIFFSSPNESMEIK 86

Query: 86  GNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQE- 139
              +I + P   HSY   +   W++YW+ F    + +        +   IY   I ++  
Sbjct: 87  EGDLILIPPYTWHSYLPHKSTGWKEYWIGFDCPHIENCLKHNLFNKNKKIYRIGIQDKII 146

Query: 140 -LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQI-EKLIATLHASL 197
            L E A  I + E       +A +  +I+  I     +   DP    I  K    +   L
Sbjct: 147 NLYEEAIRIANEEKSGYQQYLAGIANLIFCMIPYYNNNRSFDPATEDIINKAKIIMKEEL 206

Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257
               S    AA I  S +W R++F  YTG TP +Y  + ++  A   L      + E+A 
Sbjct: 207 LNGISPEKTAAQIKLSYSWFRKIFKDYTGVTPSQYIQELKMQEAKICLTTSHIQIKEIAY 266

Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            L + D  +F K FK   G  PS   K+
Sbjct: 267 HLGYEDIAYFIKLFKRHTGKRPSEYRKS 294


>UniRef50_A1U2J4 Transcriptional regulator, AraC family n=3 Tax=Marinobacter
           RepID=A1U2J4_MARAV
          Length = 306

 Score =  185 bits (470), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 100/257 (38%), Gaps = 9/257 (3%)

Query: 38  HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97
           +  A  HYR        +    ++ + +Y   G    L   GE  T+    ++ L     
Sbjct: 51  YPLAFGHYRRAAGHHMHREHHRDN-LLIYCTDGK-AFLNVAGEPYTVTAGDLLLLPAGVS 108

Query: 98  HSYHCE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEA 152
           H Y  +    W  +W+ +T     D          + I +     + L +   L++  + 
Sbjct: 109 HRYTADPDNPWTIHWVHYTGPLAEDFGQYMGFDDSTRIRHLGRQPRLLVDFNGLLSVRQT 168

Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ--IEKLIATLHASLQQRWSVADMAATI 210
                 +   +  + Q +  +  +  +  Q RQ  ++ L + +   L++R ++  +A   
Sbjct: 169 GFRARGLIHASNRLRQLLAAVPINADETSQARQAELDSLHSFMREHLEERLTLNQLAELS 228

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             S A     +   TG +P +++L  +++ A  LL     S  +++  L + D+++FS+ 
Sbjct: 229 GLSPAHFATRYREQTGTSPIQHFLHLKVERACELLDTTSQSFADISRQLGYDDAYYFSRL 288

Query: 271 FKHKFGYAPSAVLKNTD 287
           FK   G +P+       
Sbjct: 289 FKKVMGKSPTDYRHTAR 305


>UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CRK8_PAESJ
          Length = 284

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 94/256 (36%), Gaps = 14/256 (5%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105
           +   P     P + + ++  Y   G G+  L       LH      + P  +  Y  +  
Sbjct: 27  QDCDPGHYWGPGLRDMYIIHYVHSGTGQFRLGEL-SYELHAGQGFLIIPGSLVYYKADED 85

Query: 106 -VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160
             W   W+         +     +   + I++          V E               
Sbjct: 86  NPWTYSWVGLKGLHAKSLLQRAGLSPANPIFDATEQKDFFESVYEQCHQALEDHPGSGDL 145

Query: 161 FLTKIIYQWICLMYADGKK--------DPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
           F   ++YQ++  + A  K+        + +   I K +A +  S     SV D+A  +  
Sbjct: 146 FSQSLLYQYMARLVACNKQPSAPAHAVNTKEAYINKAVAFIENSYSLPISVQDIANFVGL 205

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
              +L  LF    G + + + L  R++ A+ LL  Q  ++G++A ++ + D F FSK FK
Sbjct: 206 DRTYLSGLFKAQLGVSLQAFLLRFRMNRAVELLHHQELTIGDIARSVGYTDPFLFSKMFK 265

Query: 273 HKFGYAPSAVLKNTDQ 288
              G +P     + ++
Sbjct: 266 RVIGSSPRTSRDHINR 281


>UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Bacillales
           RepID=C6IZS2_9BACL
          Length = 287

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 107/255 (41%), Gaps = 14/255 (5%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWE 108
           P  +  P I + ++  +  QG G    ++     L       + P  + SY  +    W 
Sbjct: 32  PDHRLGPKIYDYFLLHFVEQGKGTFRTESA-SYELSEGDGFLILPDQLVSYASDVAEPWR 90

Query: 109 QYWMEFTPTSMMDI-----PVGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAVAF 161
             W+ FT     ++        QQ V   G        L+ V +   + +   + L++  
Sbjct: 91  YRWIAFTGVKAAELVKRVGFTPQQPVFRQGGNSPIPAMLSSVLQAFQTKKNSSHLLSLGL 150

Query: 162 LTKIIYQWICLMYADGK----KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
           L +I+ +    +         +   +R ++++I  + +      S+  M A++  + A+L
Sbjct: 151 LHQIMAEAQETLGMASALPSGESGVQRIVKQMIHYMASQYAHPVSIEQMCASLGYNRAYL 210

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQ-GNSVGEVADTLNFFDSFHFSKAFKHKFG 276
            R+F + TG TP  Y L  R+D +  LL+++   S+ ++A ++   D  +FS+ F+    
Sbjct: 211 SRIFKKETGFTPVTYLLKLRIDKSRQLLRERPELSIEQIAASVGLTDPLYFSRQFRRFHN 270

Query: 277 YAPSAVLKNTDQHPT 291
            +PS   +   ++P 
Sbjct: 271 ESPSEYRRAVTRNPA 285


>UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=Pediococcus
           pentosaceus ATCC 25745 RepID=Q03FA9_PEDPA
          Length = 298

 Score =  185 bits (469), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 52/300 (17%), Positives = 121/300 (40%), Gaps = 29/300 (9%)

Query: 10  VKNETPYNIP-----LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64
            +NE  + +P           VI         ++  A  H+       + +      W+ 
Sbjct: 7   FENEYLFVLPPVILNNFNFSKVIKLLYITDLGFYPKARYHF-----VHRDRGT--EEWIL 59

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP 123
           ++   G G +     E+  +    I+ L P   H+Y+  +   W+ +W  F   S+ +  
Sbjct: 60  IFCTHGKGVVKSAT-EEWLIESGSIVLLPPGKEHTYYAFDDDPWDIFWAHFNGDSVNEY- 117

Query: 124 VGQQSVIYNG---------EIYNQELTEVAELITSPEAIKNNLAVAFLTKII-----YQW 169
           + Q+++  NG         E     +++  ++I +  A  +  +V + ++++     Y  
Sbjct: 118 IPQEALQGNGFLVINKTSTEDMQMLMSQFWQMIQALSAGFSYQSVFYSSQVLGATLAYVS 177

Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229
           +  +            I K +  ++   +++ S++ +   +  S+++L R+F +  G + 
Sbjct: 178 LQSVLPHDSYTMGNEYITKAVKYIYDHFEEKVSLSTLTEVLDVSKSYLSRIFRQTVGTSV 237

Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
            ++ LD ++  A   LK    +V ++A  L + D ++FS+ FK   G +P    K     
Sbjct: 238 NQFILDIKMKQACYYLKDTNLAVHQIASRLGYDDPYYFSRIFKKVVGSSPRVFRKQEKNR 297


>UniRef50_C5BZM6 Transcriptional regulator, AraC family n=1 Tax=Beutenbergia
           cavernae DSM 12333 RepID=C5BZM6_BEUC1
          Length = 291

 Score =  184 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 91/271 (33%), Gaps = 17/271 (6%)

Query: 26  VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85
             S  +   + +  +A  H R      ++        V +    G G+     G    + 
Sbjct: 27  PTSRLLVTDAGYFPHAMNHGRRRTRGTREA-------VVILCTDGVGRCE-AGGRVTEVG 78

Query: 86  GNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIP-----VGQQSVIYNGEIYNQE 139
              ++ + P   H Y  +    W  +W       +              V+   +++   
Sbjct: 79  AGQVLVIPPGLPHLYWADMHQPWTIWWFHAVGEDVTPFLEAMVCTNAARVVGVHDVFRAT 138

Query: 140 --LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASL 197
             + +V   +   E + + +  A     +   +   +  G  D Q   +      L    
Sbjct: 139 GGIEDVVRAMEQDETLPSLVTAAGAAWSVLAQLTADHLSGGAD-QAEPVRAAQEYLRLHF 197

Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257
               SV ++A     S +    LF   TG    EY    R+  A  LL     +V EVA 
Sbjct: 198 HLPVSVPELARIAGLSTSHFAALFRAATGSGVSEYVKRLRMSRARELLLTSDRTVAEVAT 257

Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           T+ + D+F+FS+ F+   G +P+   +   +
Sbjct: 258 TVGYPDAFYFSRQFRRVAGVSPTEYRRAFHR 288


>UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CSQ7_PAESJ
          Length = 285

 Score =  183 bits (466), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 28/281 (9%)

Query: 17  NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76
           NIP ++ E           +W   AD  Y+V  P     P +  +W      +G G I L
Sbjct: 18  NIPYVLEELPPQPPCRFQLIWKVQADIAYQVANPTGFSSPGLFATW------EGKGVITL 71

Query: 77  KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM---MDIPVGQQSVIYNG 133
              EQ  L     I + P    +Y C    W+ Y++EF    M   +++PVG        
Sbjct: 72  -GSEQHELVAGTYIIVPPDTPTAYRCLNGNWKFYFLEFDSLDMALGLNLPVG-------I 123

Query: 134 EIYNQELTEVAELITSPEAIKNNLAV-----AFLTKIIYQWICLMYADGK---KDPQRRQ 185
            +   ++ E A +    E + NNL +     A+ + +  Q + L++A  +   +  +  +
Sbjct: 124 PVSTAKMAEAARM---NERLINNLIMKPAGYAYDSHLAMQELLLLFARERHANRSGRHPE 180

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           ++ ++  +H ++ Q + +         S       F   TG +P +Y  + +L  A + L
Sbjct: 181 LDDILYRMHQTIGQAFPIEKWVQQSGLSRNAFFTRFRERTGMSPNQYMQELKLAAAKTSL 240

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           +    SV E+A  L F+D FHFSK FK ++G +P A  ++ 
Sbjct: 241 ETTQASVKEIAAALQFYDEFHFSKLFKKRYGMSPRAYRRDA 281


>UniRef50_A9KKI4 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           phytofermentans ISDg RepID=A9KKI4_CLOPH
          Length = 261

 Score =  183 bits (466), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 95/252 (37%), Gaps = 11/252 (4%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             +          P I + ++    ++G G     +G   TL       + P +I  Y  
Sbjct: 9   SGWEECEAGHFFGPAIRHHYLMHIILKGRG-FYQASGHTYTLGKGQAFLIYPEEITYYQA 67

Query: 103 EG-LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
           +    W   W+ F    +  +           +    I ++++ ++ +L+++     +N 
Sbjct: 68  DKKEPWIYAWVSFDGPDVEKLLDQTCFRMNRYVSPAIIRDRDVKKIQDLLSAFHQHDSNP 127

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
               L    Y+ + L Y + +K  Q   RR  EK +  +  +      + D+A  +    
Sbjct: 128 ID--LEGCFYRVLALFYGETEKGTQQYERRYYEKAVEYIEQNYGYPLKIGDLAGYVGIDR 185

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
            +L ++F+ +    PK+Y    RL  A+ +L +   SV E A +  F D+  F    K K
Sbjct: 186 TYLYKIFMEFAKCAPKQYLQQFRLKEAMGMLSEGKFSVTEAAYSCGFHDAAAFCHVMKKK 245

Query: 275 FGYAPSAVLKNT 286
            G  P     + 
Sbjct: 246 TGMTPLEFQASQ 257


>UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Oribacterium sinus
           F0268 RepID=C2KWQ1_9FIRM
          Length = 311

 Score =  183 bits (466), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 12/252 (4%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLV 106
             P  +  P   N ++      G G + + NGE   L       L P     Y  +    
Sbjct: 46  CVPGHRYGPNKRNLYLLHVVYSGVGTLFV-NGEYYHLSKGNAFLLYPHVEAWYEADLTEP 104

Query: 107 WEQYWMEFTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156
           W  +W+                    PVG    + N  +Y  ++ +  +     +  ++ 
Sbjct: 105 WSYFWIGVRGVDADSFFTEVGFSKEKPVGIVHQMDNLLLYINKILQKQDYTIEEQLSRSA 164

Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216
               F   ++       +  G          ++ A L     +  S++ +A  +    A 
Sbjct: 165 YMHLFFANLLRGKQEEAHWGGPLKDLGSHSARVRAYLDEHYHEDISISALAKEMGIHRAH 224

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
           L   F + TG +PKEY L  R+  A ++L++ G S+ E+A  + + D   FSK F+ K G
Sbjct: 225 LFNSFKKDTGYSPKEYLLYIRMQNAKAMLRRTGKSIAEIAYMVGYHDPLSFSKIFRQKIG 284

Query: 277 YAPSAVLKNTDQ 288
            +P       ++
Sbjct: 285 VSPLQYRNMKEE 296


>UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
           29149 RepID=A7B7P4_RUMGN
          Length = 253

 Score =  183 bits (465), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 101/254 (39%), Gaps = 14/254 (5%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104
            +   P     P + N ++    ++G G       E+  +       + P  +  Y  + 
Sbjct: 1   MQDCPPSYSFGPAVRNCYLLHLCLEGEGVFYSGE-ERYPIKQGQGFLIHPGKLTFYQADS 59

Query: 105 L-VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159
           +  W   W+               +  ++ I++    +   + + +++        N   
Sbjct: 60  VNPWSYLWVGIGGHDAEKYLRLAGLSARNPIFSCTQIDTAKSYILDMMKHHALSAAN--E 117

Query: 160 AFLTKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
            ++  I+ Q++ L+  D       +++     I + I+ +H + Q   +V ++A  +  +
Sbjct: 118 IYIQGILMQFLALLVEDAGCTVSPQQNTSSVYINQAISYIHKNYQNPLTVQEIADYLSLN 177

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            ++L  LFL+    +P+++    R+  +  LL+    S+  +A +  +  SF FSKAF+ 
Sbjct: 178 RSYLTELFLKTVQLSPQQFLTRYRITKSEELLQSSSLSIQNIAYSCGYSSSFSFSKAFRK 237

Query: 274 KFGYAPSAVLKNTD 287
             G +PS   K   
Sbjct: 238 VNGLSPSEYRKQKR 251


>UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales RepID=Q64XT7_BACFR
          Length = 318

 Score =  183 bits (465), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 16/257 (6%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
            +Y   +   +++    + +V +Y  +G G   L +G++  +  N    L     H+Y  
Sbjct: 59  GYYPKAYNHFRERDTPIDQYVFIYCTEGRGWFSL-DGQKHPVVPNQYFILPAGLPHAYGA 117

Query: 103 E-GLVWEQYWMEFTPT-----------SMMDIPVGQQSVIYNGEIYNQELTEVAELITSP 150
           +    W  YW+ F  T            + DI  G  S I       +E+  V ++  S 
Sbjct: 118 DEKEPWTIYWIHFGGTLAPLYCTHRTCRLTDIKPGMHSRISYRTELFEEIFRVLKMGYSL 177

Query: 151 EAI--KNNLAVAFLTKIIY-QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMA 207
           E +   +++   +L  + Y +     +++ +   +   +   I  +  +L ++ ++A++A
Sbjct: 178 ENLSYASSVFHHYLGSLRYLREYREAFSEHRPAGEEDPVNAAIHYMKENLGKKLTLAELA 237

Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267
                S ++   LFL+ TG  P  Y+   ++  A   L      V +V   +   D+++F
Sbjct: 238 DYTGYSSSYFSNLFLKRTGYAPLSYFNQIKIQKACQFLDFTDMKVNQVCYRVGIEDAYYF 297

Query: 268 SKAFKHKFGYAPSAVLK 284
           S+ F    G +P    K
Sbjct: 298 SRLFSQIMGMSPREYKK 314


>UniRef50_C7PUR1 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga
           pinensis DSM 2588 RepID=C7PUR1_CHIPD
          Length = 301

 Score =  183 bits (465), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 111/295 (37%), Gaps = 18/295 (6%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
           +    + +    +P  I+ + ++       L+ T    +Y        K+P   +  + +
Sbjct: 8   KREGFEGQQLIVVPRKISADFLTQDPITRQLYIT-DIGYYPKARYHYIKRPSGISQHIII 66

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTP---TSMMD 121
           Y ++G G I + + +++ +  +  + +     H Y  E    W  YW+ F       ++ 
Sbjct: 67  YCIEGKGWIEI-DKKRVDVLPSQFVIIPANTPHKYLSEEQEPWTIYWIHFKGEISAYIVG 125

Query: 122 IPVGQQSVIYNGEIYNQELTEVAELI---------TSPEAIKNNLAVAFLTKIIYQWICL 172
           + + +         YN+    + E I                N +   FL+ ++Y+    
Sbjct: 126 LILQRAKNFRLHLTYNENRIRLFEDICINLQKGYGDDNLRYVNMIFNHFLSSLLYEE--- 182

Query: 173 MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232
            +    ++ ++  I + I  +   L Q  ++ + +     S +    +F   TG +P EY
Sbjct: 183 KFNHAGQEERQDIIGQTITMMQEKLDQLITLQEFSQYAGLSVSHFSAVFREKTGYSPIEY 242

Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +   ++  A   L     +V E+A  L   D ++FS+ F    G +PS       
Sbjct: 243 FNHLKIQKACQYLLFSAATVKEIAVRLGVEDPYYFSRMFSKLMGMSPSEYRNRNK 297


>UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella
           multacida DSM 20544 RepID=C9KND9_9FIRM
          Length = 298

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 98/254 (38%), Gaps = 12/254 (4%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
            + V  P  +  P + +  +  + + G G     N     LH      ++P    +Y  +
Sbjct: 23  GHSVTGPGHRYGPAVRSYHLIHFILAGKGTFQ-ANQHTYCLHAGQGFLIEPDYQTTYESD 81

Query: 104 -GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN----LA 158
               W   W+ F  +   +I +    +     IY     + A+L    + +  +    L+
Sbjct: 82  AKEPWTYIWVAFNGSRAAEI-IASLRLSQADPIYTCTKEQGAKLAAYVQDMLAHNSFTLS 140

Query: 159 VAFLTKIIYQWICLMYADGKKD-----PQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
             +    +      + A+ ++D          I  +   +   L++ ++V ++A  +  +
Sbjct: 141 GRYYRLGLLMQFLSVLAEAQRDLLPPADNNAYISHMTNFIRTHLEEPFTVQELADYMNLN 200

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            +++  LF RY   +P EY  + RL  A  LL+    SV  +A +  +  S  F +AF  
Sbjct: 201 RSYVTTLFKRYLHCSPHEYIQNCRLTKARHLLETTTFSVESIAYSCGYAKSDSFQRAFLR 260

Query: 274 KFGYAPSAVLKNTD 287
           K G  P+A  +   
Sbjct: 261 KAGMTPTAYRRQQQ 274


>UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pediococcus
           acidilactici 7_4 RepID=D2EI06_PEDAC
          Length = 280

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 111/281 (39%), Gaps = 12/281 (4%)

Query: 10  VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69
           + N+   ++ +L++ + +S+   +  +        Y    P    + +  + WV  Y + 
Sbjct: 1   MNNQFTEDVSILVDNDPLSAEFHIYEVG-------YEKCQPTKPFEYIPIDYWVLHYVMD 53

Query: 70  GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPT----SMMDIPV 124
           G G     N +   L       L     + Y+ +    W   W+  +       +  I +
Sbjct: 54  GKGYFSAGNSDLQHLSAGDTFLLPANCPNIYYPDKADPWTYVWVGISGELTAKYLAQIGL 113

Query: 125 GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR 184
            +++ + N  I   +      +  + +  +N  +++ +  ++       +A+   +  ++
Sbjct: 114 SRRNFVINASIDKTKEMLFNHVYQAFKDKQNFQSLSAVYSLLDYLQQENHANNPVNQGKQ 173

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
             +K++  +  +     +++ +AA      ++L +LF RY GK P +Y    +L  A SL
Sbjct: 174 IFDKILLYVDENFASGLTISQIAANNNVDRSYLYKLFQRYLGKKPSQYVHQLKLQKACSL 233

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           L++   ++ +++    F  S +F+  F  +    P      
Sbjct: 234 LRKSSLNITQISQECGFSSSAYFTNVFAKEMNSTPLKYRNR 274


>UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR
           n=1 Tax=Bryantella formatexigens DSM 14469
           RepID=C6LM61_9FIRM
          Length = 252

 Score =  183 bits (464), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 91/238 (38%), Gaps = 17/238 (7%)

Query: 67  TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDI--- 122
             +G G + +      TL    +  +       Y  +    W   W+ F   S  +    
Sbjct: 2   VQEGRGYLEMGEA-HYTLEKGDVFLIPEGVEAWYEADKETPWSYRWIGFEGVSARECLES 60

Query: 123 -------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
                  PV +   +     Y  ++ +  +L    E  +N L +    ++I      +  
Sbjct: 61  AGFTPQKPVRKVRCLDKVGGYIDQMLKCHQLYYENELKRNALLMLVFAELITDNRKNLAG 120

Query: 176 DGKKDPQRRQ-----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
            GK   + R      +E  I  ++ +  +R  + ++A  I  + ++L   F    G +P+
Sbjct: 121 MGKYPSEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQENIGCSPR 180

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           EY +  R++ A +LLK     V EVA  + + D   FSK FK + G +P    +   +
Sbjct: 181 EYLMKLRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYKEEKSR 238


>UniRef50_A4XS27 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas
           mendocina ymp RepID=A4XS27_PSEMY
          Length = 293

 Score =  182 bits (462), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 108/278 (38%), Gaps = 14/278 (5%)

Query: 12  NETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGC 71
             TP  +  L+  + +SSG   +++   Y D          + + L  +  + +Y   G 
Sbjct: 19  FITPPRLRRLLVRHPLSSGCYPLAMG-FYPDA------AGHQMRRLQPDDHLLIYCRSGR 71

Query: 72  GKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP-VGQQSV 129
           G +   +G    +    ++ L     H+Y  +G   W  YW+ F  +   D   +     
Sbjct: 72  GWLDATDGR-FEVAAGDLLLLPKDVPHAYGADGHSPWTIYWVHFDGSLSEDFLRLLGAQT 130

Query: 130 IYNGEIYNQELTEVAELITSPEAIKNNL----AVAFLTKIIYQWICLMYADGKKDPQRRQ 185
           +    +  + L +   L+       N L    A   L  ++     L      K  +   
Sbjct: 131 LRRIGVQPRLLGDFEALLGLQRQGLNALPFIHAAHRLQAMLSSLAVLPARVSLKSGRVLD 190

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           IE + A + A L    ++ ++AA    S     + +   TG  P + ++  ++ LA  LL
Sbjct: 191 IEAVQAVMRAHLHGNLNLDELAAQFKLSRFHFAKTYRALTGHAPIQDFIQLKMALACRLL 250

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            +    V +VA+ L + D ++FS+ F+   G APS   
Sbjct: 251 DRGDIEVRQVAEQLGYEDPYYFSRLFRKVVGMAPSHYR 288


>UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum
           DSM 5476 RepID=C0E8K8_9CLOT
          Length = 299

 Score =  182 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 117/284 (41%), Gaps = 29/284 (10%)

Query: 27  ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86
            S    L  +   YA + Y              +S++ +YT+ G G I + +G +I ++ 
Sbjct: 24  TSLPFYLTEVGKFYAGKGYYTER-------SDKDSYLILYTISGRGSITV-DGNEIDIYA 75

Query: 87  NCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAE 145
           +  +F+       Y  E    W   W     T +        S++  G +  +++++ A+
Sbjct: 76  HNAVFINCNSHQFYKTESDVPWVFLWAHINGTGVEPY----YSLVNVGRVSQEKISDYAD 131

Query: 146 LITSPEAIK-----------NNLAVAF--LTKIIYQWICLMYADGKKDPQRRQIEKLIAT 192
            +   E I            +NL+V    L  II +       + K +     I   +  
Sbjct: 132 FVELFEEILITSKFNDVRTLSNLSVNLQRLLSIILKSRLSSSNNKKHESHIADIRSSVDY 191

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
           +  + +++ S+ D+   I  S+ +  RLF +Y G TP +Y ++ R++ A  LL      +
Sbjct: 192 IRKNYKRQISIDDIIHRINISKYYFIRLFKQYMGTTPYDYLINYRINQAKILLNSTSMPI 251

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT---DQHPTDA 293
           G+++  + F D  +F   FK + G  P+    +T    + P DA
Sbjct: 252 GDISQEVGFLDESNFISHFKRQTGIKPTEYRNSTLGFHRPPKDA 295


>UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulatory protein n=15
           Tax=Bacilli RepID=Q4V1B1_BACCZ
          Length = 301

 Score =  181 bits (460), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 14/257 (5%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             +    P     P + NS++    + G GK  +K  ++ +L    +  + P +   Y  
Sbjct: 23  CGFSKTLPFHAFGPAVRNSYIIHVVLDGKGKYYVKE-KKYSLKKGDLFLIPPGESTFYRS 81

Query: 103 E-GLVWEQYWMEFTPTSMMDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
           +    W   W+ F      +I         +         Q L  + E +    +   N 
Sbjct: 82  DAEEPWLYAWLSFGGKVAEEIINFSNFKDDNYAVTSTNIQQYLEIILECMNCSYSTLENE 141

Query: 158 AVAFLTKIIYQWICLMYADGK------KDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211
               L ++ Y+++ L   DG       K    R   + +  +     +  +V+D+A  + 
Sbjct: 142 LK--LNELTYRFLRLFLTDGSSLSPGVKQKFSRLAIEAMIYIGKHYIEEITVSDVANHLA 199

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
            + + L R+F  + G + K++ +  R++ A  LL     SV  ++  + F     FS+ F
Sbjct: 200 VNRSHLSRVFQNHFGISMKDWIIRMRINHAAYLLSMTNESVENISYQVGFHSLAAFSRIF 259

Query: 272 KHKFGYAPSAVLKNTDQ 288
           K      P+   K   +
Sbjct: 260 KKVTKETPTHYRKRMSK 276


>UniRef50_C6XV52 Helix-turn-helix-domain containing protein AraC type n=1
           Tax=Pedobacter heparinus DSM 2366 RepID=C6XV52_PEDHD
          Length = 298

 Score =  181 bits (460), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 114/291 (39%), Gaps = 11/291 (3%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           MN +        +    +P    + V      LI   +  A  +Y      D+++   + 
Sbjct: 5   MNVRKIKEGFLGQQMIVLPPDTKKVVTK--NPLIRGLYLTAIGYYPKAIHHDRERKTGSQ 62

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPTSM 119
            ++ +Y  +G G + +   ++  L  N  I +     H Y   E   W  YW+ FT    
Sbjct: 63  QYIFLYCTEGRGYVEIL-KQRFELVPNTYIIIPKNIAHHYCTSESDPWTIYWIHFTGEHA 121

Query: 120 MDIP---VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI-IYQWICLMYA 175
             +        +       Y+++ TE   L+ S      +     LT I + Q++     
Sbjct: 122 DQLYSRYAKDTAPEVQTIAYDEQRTEQFNLMLSLLENNYSTRNIELTNIKLLQFLSSFIY 181

Query: 176 DGKKDPQRRQIEKL---IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232
             +  P    ++++   I  +  +L + +++ ++AA    S +    LF + TG +P +Y
Sbjct: 182 HEEMYPSHYSVDQVSISIKFMKENLTKCYAIQELAAHSNYSVSHYSDLFKKKTGCSPMQY 241

Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           +   ++  +   L     ++ E+   + F D ++FS+ FK   G +P+   
Sbjct: 242 FNQLKIQKSCQYLYFTDMNIKEICVKIGFDDPYYFSRMFKKLMGSSPANYR 292


>UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=unclassified
           Gammaproteobacteria (miscellaneous) RepID=B7RWJ7_9GAMM
          Length = 293

 Score =  181 bits (460), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 107/290 (36%), Gaps = 21/290 (7%)

Query: 10  VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69
           V+  TP  +   +  + ++      ++ +  A   +R+   R        +  + +Y   
Sbjct: 14  VRFITPTFMLEKLARHPLTKDCYPTAMGYYPAASGHRMQRERH-------DDNLLLYCTS 66

Query: 70  GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSM--------- 119
           G G++ + +     +    I+ L     H+Y  +G   W  YW+ F   S          
Sbjct: 67  GRGQLTVGD-WHSQVTAGHIMLLPQGLAHTYEADGDDPWTLYWVHFQGASTRVFMQYLGY 125

Query: 120 -MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178
             D P+    V          L EV     S  A  N  A   L  +I Q    + A   
Sbjct: 126 REDRPLTNAGVSPLLIGAFTNLLEVRRTGYSTRAFIN--ASNHLRHLITQMSMEISAHAG 183

Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
           +     +++ + A +   + Q  ++  +A     S+      +   TG  P +++L+ ++
Sbjct: 184 RLQSGFELDHVQAYMLEHIDQTITLDALAQVANMSKYHFSNRYKTLTGYPPIKHFLNMKM 243

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           + A  LL      V E+A  + + D  +FS+ F    G +P     +T +
Sbjct: 244 EHACHLLDSTDMGVSEIARGVGYDDPLYFSRLFSRTVGSSPRGYRSSTRK 293


>UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=Lactococcus lactis
           subsp. lactis KF147 RepID=A9QSR3_LACLK
          Length = 289

 Score =  181 bits (460), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 98/244 (40%), Gaps = 11/244 (4%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWE 108
           P     P I  ++V  Y   G G+ ++  G +  L       +       Y  + L  W 
Sbjct: 25  PNFSFGPAIRENYVIHYITSGSGRYMIY-GFEHQLKAGDCFIIPADVETFYQSDALTPWA 83

Query: 109 QYWMEFTPTSMMDIP----VGQQSVIYNG---EIYNQELTEVAELITSPEAIKNNLAVAF 161
            YW+  +   + D+     +  +  I        + +  +++  LI+  +   +      
Sbjct: 84  YYWLGLSGHVVNDLFARTALDDKGWILENVSKTEFIEHFSKIQNLISDDDKTVDLDIQVE 143

Query: 162 LTKIIYQWICLMYAD--GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
           L  ++   I L        K+      EK    ++ +  Q   + D+ A +  S A+L  
Sbjct: 144 LFALMKSLITLFPKSITEHKNQSDYYAEKAYTFINQNYSQSIKIKDVLAHVMISRAYLFT 203

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           +F    G +P++Y +D R+  A  LL    N V ++++ + F DS  FS AFK ++G +P
Sbjct: 204 IFKHKYGLSPQKYLIDLRMAKAAMLLIHSDNLVSQISEAVGFSDSLSFSSAFKKRYGVSP 263

Query: 280 SAVL 283
           +   
Sbjct: 264 TKFK 267


>UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales
           RepID=C7H3E2_9FIRM
          Length = 306

 Score =  181 bits (460), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 100/241 (41%), Gaps = 12/241 (4%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWMEFTP 116
              +  +Y   G         E++ +    ++  +P +I  Y  + E    E +W+ FT 
Sbjct: 65  RRDYQILYVASGKAHFWFDGVEEV-VTSGHMVLYQPKEIQKYVYYVEDHP-EVFWIHFTG 122

Query: 117 TSMMDIPVGQQSVIYNGEIYNQELTE--------VAELITSPEAIKNNLAVAFLTKIIYQ 168
             + +I       +     Y+  L +        + EL       ++ +A  F   +   
Sbjct: 123 YDVKNILNYHGIPLDKHVFYSGTLPDYKMLFRKIIRELQQCEYGYEDYIASLFNIILFLV 182

Query: 169 WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
                 ++        +IE  +A  + +   + SV D A ++  S  W  R F +Y   +
Sbjct: 183 SRQQQESEKTTTSIPEEIEAAVAYFNENYNTKVSVDDYAESLHISTNWFIRNFKQYMKIS 242

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           P +Y L  R+  A SLL+    ++GE+A+ + + +  +FS+ FK ++G +P+   KN ++
Sbjct: 243 PAQYILSLRMVNAQSLLENTEYNIGEIAEIVGYDNPLYFSRVFKKEYGVSPAQYRKNLEE 302

Query: 289 H 289
            
Sbjct: 303 S 303


>UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Bacillales
           RepID=C6IVE8_9BACL
          Length = 289

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 104/257 (40%), Gaps = 22/257 (8%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWE 108
           P  +  P + + ++     +G G      G++ +        + P  + +Y  +    W 
Sbjct: 33  PNHRIGPSVHDYFLLHTVFEGKGTYTW-GGQEYSCRTGDTFVIFPEGLFTYEADSLDPWH 91

Query: 109 QYWMEFTPTSMMDIPV-----GQQSVIYNGEIYNQELTEVAELITSPEA------IKNNL 157
             W+    + ++           + V+ +GE   +EL E+   + S         +++  
Sbjct: 92  YAWVALRGSGVLRQLADVGITPDKPVVSSGE--PEELRELYARLRSSFRQSDHPHLESLE 149

Query: 158 AVAFLTKIIYQW----ICLMYADGKKDPQ--RRQIEKLIATLHASLQQRWSVADMAATIP 211
           A  ++T +++ +       +     K+P    RQ+E+ I        Q+  + ++A  + 
Sbjct: 150 AAGWVTLLLHHFGVANREHLPRSAAKEPAMIDRQVEQAIRWFQLQYPQQIGIEELARNLG 209

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
              A L   F   TG +PK+Y    R++ A  LL     ++ ++A ++ F D+ +FS+ F
Sbjct: 210 YHRAHLFSAFKARTGLSPKQYLTKVRIEKAKELLA-GPLTIDQIASSVGFNDALYFSRQF 268

Query: 272 KHKFGYAPSAVLKNTDQ 288
           K   G +PS       +
Sbjct: 269 KKSTGKSPSEYRHGNGR 285


>UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi
           DSM 13479 RepID=UPI0001C36471
          Length = 287

 Score =  181 bits (459), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 101/274 (36%), Gaps = 13/274 (4%)

Query: 17  NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76
           N+  +  +N+     SL   +                  P     ++  + ++G G    
Sbjct: 4   NMIEIFRKNISGESSSLSFGYA-----GREQCMGSHSFGPARRAHYLIHFIIKGKGVFFA 58

Query: 77  KNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVG---QQSVIYN 132
            + ++  L    +  ++P +   Y+ +    WE  W+ F  +    I        S +  
Sbjct: 59  DD-KKYILKQRDMFLIRPGETTFYYADEVDPWEYAWVAFVGSDAAQITESCGFAYSPVAT 117

Query: 133 GEIYNQELTEVAELITSPEAIKNN--LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLI 190
                + +  + ++I   +    N    ++ L  I Y ++     + +   +   + + +
Sbjct: 118 YPDSPELIESIDDIIHHMQTGDENDYYLLSRLYNIFY-YLSKPVINTQNTYKNEIVRRTV 176

Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250
             + +S  ++ ++  +A  +     +L RLF    G  PKEY    R+ +A  +L     
Sbjct: 177 NLIRSSYFEKLTIQWLADQVRVDRTYLYRLFKEEVGICPKEYLTQYRIRMATVMLSTTNQ 236

Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           S+ E++    F D+  FS  FK   G+ P    K
Sbjct: 237 SIKEISYACGFTDTSLFSICFKKYLGFTPQQFRK 270


>UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D1W6_PAESJ
          Length = 264

 Score =  180 bits (458), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 116/268 (43%), Gaps = 19/268 (7%)

Query: 32  SLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIF 91
           + +   H   +E Y ++      +P     W+ VYT++G G      GE+I      ++ 
Sbjct: 7   NGVVTGHFLENESYCMV------RPAGREDWLLVYTLEGEGFFRTPAGEKIC-KAGELVL 59

Query: 92  LKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQQSVIY---NGEIYNQELTEVAELI 147
           L+    H+Y   +G  W   W+ F     + +   ++ ++    + E+  + +     L+
Sbjct: 60  LRKRVPHTYGTVKGDTWNFLWVHFNRLPELSLLPDEEVLLCPLPSSELQRRVIRIFRSLL 119

Query: 148 TSPEA---IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVA 204
               A       L    L+ +I     L+ A    D    ++ +++  L A +Q+  S+ 
Sbjct: 120 HDSRAQGGFWEELCDNQLSALI-----LLMAGQLADKLDYRVSQVMRILSAQMQEPLSIN 174

Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264
           ++AA +  S + L  LF   TG++  +   + RL+ A+ L+ Q G + GE +  + F   
Sbjct: 175 ELAARVGLSASRLSHLFKSETGRSIVDTLNNMRLEQAVLLMLQAGRTAGEASFDVGFQSY 234

Query: 265 FHFSKAFKHKFGYAPSAVLKNTDQHPTD 292
            HF+  F+ ++G  P+   + T+   T 
Sbjct: 235 NHFAALFRRRYGCGPAEYKRKTESTSTP 262


>UniRef50_C6IY48 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp.
           oral taxon 786 str. D14 RepID=C6IY48_9BACL
          Length = 315

 Score =  180 bits (457), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 108/301 (35%), Gaps = 34/301 (11%)

Query: 12  NETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGC 71
              P  +   +N + ++  + +  +       H+       +++P  A++ + +Y V+G 
Sbjct: 17  FVQPDYMLKELNNSTLTRPLFVSDIGFFPNARHH------YRERPEGADAHIFIYCVEGE 70

Query: 72  GKILLKN-----------------GEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWME 113
           G +                      +   L    +  +     H Y       W  YW  
Sbjct: 71  GWVEWSEEPTDGRPDRSGTTTSKMQQSYPLTERQLAVIPAHKPHRYGASTDKPWSIYWFH 130

Query: 114 FTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITS--PEAIKNNLAVAFLTKIIY 167
                    +    + Q   +      + +L E  E       +   +      + + + 
Sbjct: 131 LQGEDTNALIHTYGLDQGGPVRLPLSVHAQLLEHFEQCYRLLHDKHYSLPVQIHVAQTMR 190

Query: 168 QWICLMYADGKKDPQRRQIEK----LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
             +  +    ++  Q R+ E+     +  +   L +  +++++A  +  S+  L  LF R
Sbjct: 191 HLLSSIGLSAERSAQDRKRERYFDEAVRYMTERLTENLTLSELAKQVGLSKQHLVYLFNR 250

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
             G  P EY+L  ++  A  LL   G SV E+A  +   D ++FS+ FK   GY+P+   
Sbjct: 251 EAGLPPIEYFLRLKMQRAGQLLDLTGLSVKEIAGAVGLSDPYYFSRLFKKIMGYSPTEYR 310

Query: 284 K 284
           +
Sbjct: 311 R 311


>UniRef50_B0MR70 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM
           15702 RepID=B0MR70_9FIRM
          Length = 290

 Score =  180 bits (457), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 91/247 (36%), Gaps = 17/247 (6%)

Query: 49  WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWE 108
           W          N   A+Y  +G G +L+ NGE+  ++     F+     H Y+     W+
Sbjct: 43  WQYHVICGNGDNYAKALYCTKGSG-VLIMNGEKHIINPYTAFFIPAGCPHEYYSTDESWD 101

Query: 109 QYWMEFTPTSMMD------------IPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156
            +W++ +  S  D             P+ ++ + Y    +      + E + S +   N 
Sbjct: 102 THWIKPSGKSCTDMLKALGFDKPKIFPLPKEEITYLDRCFRC----MHEALLSDKVDGNF 157

Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216
            A  +L     +   L             + K IA +  +  ++  +  ++     S   
Sbjct: 158 RASGYLYSFFIELSRLAAKGKGSVQIAPAVTKAIAYIDENYMKQPGLESISKAAGVSSQH 217

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
           L RLF +     P EY    ++  A  LL +   +V ++A+   F DS +F K FK    
Sbjct: 218 LCRLFRQTLNCRPMEYITKRKIQAAKMLLAETRKTVEQIAEETGFCDSSYFCKIFKRFES 277

Query: 277 YAPSAVL 283
             PS   
Sbjct: 278 ITPSQFR 284


>UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=bacterium Ellin514
           RepID=B9XJ41_9BACT
          Length = 295

 Score =  180 bits (457), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 103/277 (37%), Gaps = 24/277 (8%)

Query: 19  PLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKN 78
           PLL +     +G    +  H            R K  P +    + +Y  +G G   +  
Sbjct: 30  PLLQHLLPTDAGYYPTAKGHVCV---------RRKGCPEV----IFIYCAKGNGWCEIA- 75

Query: 79  GEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNG 133
           G +  +  N ++ +     H Y  +    W  +W     ++    +  + V ++  +   
Sbjct: 76  GRKHQISKNQLLVINAFTPHVYGADKNSPWTIHWFHAVGSNVSVYLDKLGVTEEKPVVPL 135

Query: 134 EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-----DPQRRQIEK 188
               Q  +   E++ S E       + +    +   + L+     +        R ++  
Sbjct: 136 GGDVQLFSLFEEVLESLEHGFTPTHLIYAAHSLTHLMGLILRHKDEFGYGETSVRERMAN 195

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
            I  +   L++  ++  +AA +  S +     F R TG  P  Y    R+  A+ LL   
Sbjct: 196 SIEFMKGHLREPLNIVTLAALVNLSRSHYSTSFRRVTGYAPLSYLNHLRMQRAVQLLNAT 255

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
             S+ E+ D L F D F+FS+AF+    ++PS   + 
Sbjct: 256 ELSIKEIGDQLGFSDQFYFSRAFRKVHNHSPSEHRRR 292


>UniRef50_A5ZSJ3 Putative uncharacterized protein n=4 Tax=Clostridiales
           RepID=A5ZSJ3_9FIRM
          Length = 287

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 102/261 (39%), Gaps = 16/261 (6%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL---KNGEQITLHGNCIIFLKPMDIH 98
              Y    P     P + N ++  Y + G G + +    +     +  +    ++P  I+
Sbjct: 25  QYGYEKCEPLHSYGPFVRNHYLFHYIISGKGMLSVTEKDDNAVYHMEAHSGFLIEPGRIN 84

Query: 99  SYHCEGL-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI 153
            Y  +    WE  W+EF        M +  +     +++  I +    ++ + +      
Sbjct: 85  LYSADQKFPWEYVWVEFDGLRAKELMEEAGLSNDHPVFH-PISDTAADKLRDEMLRLTQY 143

Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIATLHASLQQRWSVADM 206
            +N     +   +Y  +  +        +       R   ++ ++ +  +     +V DM
Sbjct: 144 PDNSRPLGIIGQLYLIMDALIQGSSNKKRLQGGKLSRFYAQEALSFIEQNYALPITVEDM 203

Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266
           A       ++  ++F    G++P+++ +  R+  A SLL     S+G+++  + + +  H
Sbjct: 204 ANRCNLDRSYFGKVFKDMIGQSPQDFLIRYRMSKATSLLTSTSLSIGDISVQVGYPNQLH 263

Query: 267 FSKAFKHKFGYAPSAVLKNTD 287
           FS+AF++ +G +P    +   
Sbjct: 264 FSRAFRNIYGMSPRQYRQQNK 284


>UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi
           DSM 13479 RepID=UPI0001C36461
          Length = 276

 Score =  178 bits (453), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 86/242 (35%), Gaps = 7/242 (2%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLV 106
                   P + +  +  + ++G G      G Q  +       ++P ++  Y  +    
Sbjct: 11  CEKGHFFGPAVRSHQLIHFVLKGKGIYRTGYG-QYEIKEGEAFLIRPGEVTYYQADFEEP 69

Query: 107 WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAE-----LITSPEAIKNNLAVAF 161
           W   W+ F       +                E+T V+      L     A +N   V  
Sbjct: 70  WSYAWIAFDGDGAEALLERYYPDHSFPVCAMGEITAVSGWFEGLLGAFGSAEENRERVLG 129

Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
              +I   +      G    +    ++ +A +  +      ++++A  +     +L R+F
Sbjct: 130 YFYLIMACLLRSGKGGVPVDEEGYFKRAVAFIRHNYSYPIQISEIAGYVGIDRTYLYRIF 189

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           +   G +PK+Y    RL+ A  +L Q    + E+A +  + DS  F + F+   G AP+ 
Sbjct: 190 MHQAGVSPKQYLSRYRLEEAKEMLVQTEYRITEIAYSCGYHDSSSFCRHFQKATGNAPAR 249

Query: 282 VL 283
             
Sbjct: 250 YR 251


>UniRef50_C9AKD6 AraC-type DNA-binding domain-containing protein n=3
           Tax=Enterococcus faecium RepID=C9AKD6_ENTFC
          Length = 286

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 94/253 (37%), Gaps = 11/253 (4%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             Y    PR    P I   ++    ++G G   + + +   L       + P     Y  
Sbjct: 25  CGYSKTEPRHSFGPAIREQYLIHILLEGEGYYSINDQK-YFLKKGQGFVIPPGVSTFYQA 83

Query: 103 E-GLVWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPE-----A 152
           +    W   W+  +       + +I VG+  + +  E  N     + E ++  +      
Sbjct: 84  DEKNPWSYVWLGLSGNLVEYYLKEIGVGKNHLTFKVENLNSFKGLIFETLSYDQDNLVSE 143

Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
           +     V    +++      +            + + I  +  +  Q+ SV D+A ++  
Sbjct: 144 LSRQKQVYKFLELLLNSASYLNEGIITKKMNPFVRQTIEIIRENAYQKLSVKDIAVSLSI 203

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
            E +L RLF    G + KEY  + ++ +A  LL     S+ +++D + F     FSKAFK
Sbjct: 204 HENYLSRLFKNDMGISIKEYISEIKISIANDLLSSTEYSIQQISDKIGFSTVQSFSKAFK 263

Query: 273 HKFGYAPSAVLKN 285
              G +P    K 
Sbjct: 264 KANGVSPGVYRKR 276


>UniRef50_B0MEA0 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
           14662 RepID=B0MEA0_9FIRM
          Length = 292

 Score =  178 bits (451), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 93/265 (35%), Gaps = 29/265 (10%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LV 106
             P     P + +  +  Y V G G     + +Q T+       + P ++  Y  +    
Sbjct: 25  CTPLYSFGPAVRSHHLLHYCVSGKGYYYAGD-KQYTIEPGDAFLILPDEVTFYQADEQDP 83

Query: 107 WEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNN--LAVA 160
           W   W+ F+   + D      +  + +I + E     ++ + +++       +N      
Sbjct: 84  WTYLWVGFSGNQVNDYLQRCGLDSEHLICHCEEKELLVSYIEDILRHNTLSYSNEIYIQG 143

Query: 161 FLTKIIYQWICLMYADGKKD--PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218
            L  I   +        K D   +   I K I  +  + Q   +V D+A  +  + ++L 
Sbjct: 144 ILFLIFASFSRSADIKYKSDFTSENIHISKAIEFIQKNYQNVITVRDIADYVSLNRSYLC 203

Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH----- 273
            +F      +P+++ L  R+  A  LL      V  ++ +  + +   FSKAFK      
Sbjct: 204 SMFQENLHMSPQQFLLRFRVTKATELLSDTDLPVKNISYSCGYANQLAFSKAFKKNYRFK 263

Query: 274 --------------KFGYAPSAVLK 284
                           G+ PS   K
Sbjct: 264 SHGLPQRKPECSEYYTGFRPSQSRK 288


>UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n=1
           Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDF7_9BACT
          Length = 274

 Score =  178 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 114/272 (41%), Gaps = 9/272 (3%)

Query: 25  NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84
           +++ +G +LIS   TY    +      D  +  + + +  +   +G G I  +  +  T+
Sbjct: 2   DILGAGSALISKGDTYPPSIHPSDHYFDWMRGRVLDEFQLLLITKGSGTIETEATDSFTI 61

Query: 85  HGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP----VGQQSVIY---NGEIY 136
               +  L P   H Y   +   W ++W+ F  T   ++     +  +   +   + E  
Sbjct: 62  TAPIVFLLYPGVWHRYRPSQDTGWHEHWIAFRGTFADELLRSGLISPEKPFHKTGHSETL 121

Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-MYADGKKDPQRRQIEKLIATLHA 195
             ++  + + + +      ++A A L +I+   I L    + +  P R+ I +    +  
Sbjct: 122 LAQVQLIQDEVRAEAHGYRSIAAAALMQILALAITLPQRREEENQPMRKVIRRACFLMRE 181

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
              +     ++AA +     + RR+F ++TG +P  Y+   RL     LL+   NS+ E+
Sbjct: 182 RSDRPLMPEELAAELNIGYTYFRRMFRKFTGISPNRYHAQLRLRRVKRLLRDTSNSIVEI 241

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           AD L F   +H S  FK + G +P    K+  
Sbjct: 242 ADVLGFNSPYHLSNWFKKETGRSPQHWRKDPQ 273


>UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=Yersinia
           RepID=A4TH83_YERPP
          Length = 292

 Score =  177 bits (450), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 95/258 (36%), Gaps = 9/258 (3%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
            H R       ++  +A     ++ + G G I L+N       GN            +  
Sbjct: 33  GHIRAADNFHVRRQSVAGH-ELIFCLNGSGFIRLENNLHEVKKGNLAWLPVRWPHEHFPN 91

Query: 103 EGLVWEQYWMEFTPTSMMDI----PVGQQSVIY--NGEIYNQELTEVAELITSPEAIKNN 156
           +   WE  W+      + +I     V QQ V    + E        + +L+ S   + + 
Sbjct: 92  KQEPWEILWLRIDGAKLNNIMQILDVAQQPVFEFTSPETITDIYHRLFDLMQSHTLVADA 151

Query: 157 LAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
                 +++IY  +     D  K P    R + +LI  +H+     W +         S+
Sbjct: 152 HCDVLCSQLIYTLLENRSFDATKSPVISHRGLGRLIYQIHSHYNDDWDIDKFMQYCQVSK 211

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
           + L RLF     ++P  +  + RL  A  LL +   ++  +A  + + D  HFS+ F   
Sbjct: 212 SQLFRLFQETFNQSPLRWLKNYRLSQARRLLVETEETISRIAGLVGYNDPLHFSRDFHRS 271

Query: 275 FGYAPSAVLKNTDQHPTD 292
            G +PS   +   Q   D
Sbjct: 272 VGLSPSDFRRQERQLDND 289


>UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecalibacterium
           prausnitzii M21/2 RepID=A8S939_9FIRM
          Length = 291

 Score =  177 bits (450), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 106/286 (37%), Gaps = 22/286 (7%)

Query: 19  PLLINENVISSGISLISLWH------TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72
           P  + +    S   L   ++       YA +H+               S++  YT++G G
Sbjct: 10  PESVWKRTTPSEAELAQPYYCTEAGVFYAQQHFSTAR-------TDKESYILFYTLRGAG 62

Query: 73  KILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWMEFTPTSMMD-----IPVG 125
            I       + L     + L      SY        W  YW+      +       +P  
Sbjct: 63  LIEQGES-HVVLSTGQALLLNCRTPQSYCTAPGQSCWHHYWVHLDGAGVAAMEPLLLPGK 121

Query: 126 QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF-LTKIIYQWICLMYADGKKDPQRR 184
           + + +    +  QE  E+         + + +     L +++      + A  +    R+
Sbjct: 122 KLTPVQLTGVKMQEYFEMLLGQMEHSTVDSMVTTGLALHEMLALCARSILAQAEATSARQ 181

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
            I +   TL  + Q+   +AD+ A    S+++  RLF RY G TP  Y ++ R+  A  L
Sbjct: 182 VILQAAETLSKNYQKELYLADLLAEAHMSKSYFLRLFRRYMGTTPYNYLVNFRITQAKEL 241

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHP 290
           L    +SV E+A  + F D+ +FS  F    G +P    K   +  
Sbjct: 242 LVLTDHSVSEIAQEVGFGDASNFSTRFAKATGQSPLQYRKRALKPQ 287


>UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 Tax=Lactobacillus
           RepID=A8YXG2_LACH4
          Length = 274

 Score =  177 bits (449), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 108/272 (39%), Gaps = 15/272 (5%)

Query: 25  NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84
           N+ +  I    L++     H    +  +     +  ++V  Y + G G         + L
Sbjct: 7   NLSNPHIESYILFYGQQKCHPNEYFESN----NLQKNYVLYYILSGEGTFSSNGHHTVNL 62

Query: 85  HGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT------SMMDIPVGQQSVIYNGEIYN 137
               +  +       +  +    WE  W+    +         ++P            + 
Sbjct: 63  SQGDLFLIPRNTTCFFKADKDNPWEYLWLGLAGSDTKKIIEASNLPNKNFLRQIKRTEFY 122

Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG---KKDPQRRQIEKLIATLH 194
             L E+ E++   +++  NL +A LT   + ++   + +    +K P+  Q +  I  L 
Sbjct: 123 SILLELYEMLNKRKSLLTNLKIASLTSQFFYYLVKEFPNHPPVRKTPKNDQYQIAINYLQ 182

Query: 195 ASLQQR-WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253
            +      ++ ++   +  S ++L  LF   T  +P++Y +  R++ A   L+   +++ 
Sbjct: 183 KNYTDPNCNIVELCNRLGVSRSFLYSLFRENTNISPQKYLMQLRMEAAKKELQNTTSNLK 242

Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           E+A  + + D F FSKAFK   G +P+   +N
Sbjct: 243 EIAHKVGYGDEFTFSKAFKRYSGVSPNVFRRN 274


>UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=Leuconostoc
           mesenteroides RepID=Q03WL4_LEUMM
          Length = 309

 Score =  177 bits (449), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 98/256 (38%), Gaps = 15/256 (5%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-G 104
              +      PL  + ++  + ++G G     N +  TL       ++P +   Y  +  
Sbjct: 26  SKTFSGHASGPLKRSHYLLHFVLEGQGTYFTMNHK-YTLKAGDFFLIRPDETIFYQADLN 84

Query: 105 LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN-----QELTEVAELIT------SPEAI 153
             W   W+    T    +         + + ++       L  + E +T        E  
Sbjct: 85  NPWHYAWISIGGTETAQLIENFSPFRNHHDTFSCATVENYLKLIVESLTLTSHRPQTELR 144

Query: 154 KNNLAVAFLTKIIYQ--WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211
            N +A   L  ++ +  W  + + +    P     +  +A ++ +     S+ D+A  I 
Sbjct: 145 LNQIASEILLLLMKENTWNVVEHQNATIRPMSEYTKLSLAYINNNFTYDTSITDIADAIK 204

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
            + ++L RLF R  G +PK++ L  R++ A  LL+    S+ ++++ + F +   F  +F
Sbjct: 205 INRSYLSRLFRRDVGISPKKFLLRLRINEACQLLQTTQLSINQISEKVGFSNPSVFGHSF 264

Query: 272 KHKFGYAPSAVLKNTD 287
                  PSA  K   
Sbjct: 265 TELIHETPSAYRKRRS 280


>UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D8J8_PAESJ
          Length = 294

 Score =  177 bits (449), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 92/256 (35%), Gaps = 18/256 (7%)

Query: 49  WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVW 107
            P  K  P + N  +      G G    +  ++  L    I  + P  + +Y  +    W
Sbjct: 34  RPLHKVGPAVYNYTLIHSIDHGFGTFEWQR-KKYHLGKGDIFVIFPGVLFNYEADKAEPW 92

Query: 108 EQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167
              W+     ++ ++       I N  +   +   +A +  + E      +   +T +  
Sbjct: 93  SYRWVALQGRNVTEMLENVGVTITNPIVRGADSANLASIFETIEQELELKSGETITSLAT 152

Query: 168 Q-WICLMYADGKK--------------DPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
             W  L+ A+  +                  R +E+ I           S+  +A ++  
Sbjct: 153 DGWFRLLLAEFARLNTNKLHYSSTKVLTDSERLVEQAIRWFQTQYMLPISIEKLATSLGY 212

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
                 ++F + T  +PK+Y    R++ A  LL     S+ +V ++  F D  +FSK FK
Sbjct: 213 HRTHFTKVFKQLTSLSPKQYINQVRMERARELL-NTNISIEQVGNSCGFTDPLYFSKQFK 271

Query: 273 HKFGYAPSAVLKNTDQ 288
              G +P+   +   +
Sbjct: 272 KWTGTSPTQYREELKR 287


>UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
           1_7_47FAA RepID=C5EG90_9FIRM
          Length = 298

 Score =  177 bits (448), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 11/253 (4%)

Query: 43  EHYRVI-WPR-DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP-MDIHS 99
            HY+++ +PR +  +P     +  +Y   G      K    + L     +   P      
Sbjct: 28  GHYKLVHFPRFETTRPTGRPDYQLLYIASGIAHFQ-KGETYVPLPAGSAVLYHPNHTQFY 86

Query: 100 YHCEGLVWEQYWMEFTPTSMMDIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNN 156
           Y+      E YW+ FT   +           +  YN  I ++ ++    +I   +  K N
Sbjct: 87  YYSAEDSSEVYWIHFTGNRVSQYLSDWGVPDNDFYNVGINSRYISFFNHIIHEQQLKKEN 146

Query: 157 ---LAVAFLTKIIYQWICLMY-ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
              L   +L +I+      M  A    +     I K +  LH    +  S+ D+A     
Sbjct: 147 YMELCKYYLIQILILMNRGMKEASAPYNNHVSIINKTVTYLHEHYNEPISIIDLAKENHL 206

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           +  W    F  Y G +P+ Y L+ R+D A   L     S+ +VA    + D+F+FS+ FK
Sbjct: 207 TPNWFNHCFQEYYGMSPQAYLLNIRIDKAKEFLTNYMLSISDVALLTGYSDAFYFSRIFK 266

Query: 273 HKFGYAPSAVLKN 285
            K G +P    KN
Sbjct: 267 RKTGLSPQQYRKN 279


>UniRef50_UPI000196AF05 hypothetical protein CATMIT_01210 n=1 Tax=Catenibacterium mitsuokai
           DSM 15897 RepID=UPI000196AF05
          Length = 288

 Score =  177 bits (448), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 104/250 (41%), Gaps = 15/250 (6%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYW 111
              P++ + +V  +   G G++ + N     +    I  +    + +Y  +    W+  W
Sbjct: 43  TYGPIVRSYYVMHFVFSGKGQLTI-NEHSFDVKAGDIFLIPANKVATYQADKNHPWKYGW 101

Query: 112 MEFTPTSMMDIPVG------QQSVIYNGEI--YNQELTEVAEL--ITSPEAIKNNLAVAF 161
           + F   +              Q +I+N ++  Y +++  + +L   T  E  ++N  +  
Sbjct: 102 VNFLGINAEQYFYSLTKDTHDQYIIHNVDVNKYYKQIERLLDLSFNTDAEYFESNSILLH 161

Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
           +  ++Y+ + + + +  K     +I      L  + Q    ++++A        ++ RLF
Sbjct: 162 IFAMLYEELNIHFNNNVKYSLAEEIR---LYLDLNYQYNLKMSEIADKFGIHANYMTRLF 218

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
            +    +PK+Y L  +L  A  LL+     V  +A ++ F D+  FSK F   +  +P+ 
Sbjct: 219 HQKFDISPKQYLLSIKLKKAAGLLQSTNLPVSTIAASVGFIDALAFSKKFSKTYHCSPTQ 278

Query: 282 VLKNTDQHPT 291
             K TD+   
Sbjct: 279 YRKQTDEKKN 288


>UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
           RepID=A7VNA5_9CLOT
          Length = 282

 Score =  176 bits (447), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 94/256 (36%), Gaps = 12/256 (4%)

Query: 43  EHYRVIW--PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100
            HYR++        +      W  +Y  +G G       E+  +    ++   P +   Y
Sbjct: 29  GHYRLLRLEKLHTVRIQGRRDWQLLYVAKGAGHFFRPREER--VKQGSVVVYPPGEPQDY 86

Query: 101 -HCEGLVWEQYWMEFTPTSMMDIP------VGQQSVIYNGEIYNQELTEVAELITSPEAI 153
            +      E YW+ FT      +        G    +   + Y +   E+ + +      
Sbjct: 87  FYLLKEAPEIYWIHFTGERAEGLLEEWGLFHGHSCFVGEQDRYLRCFEEIIQELQLQPPG 146

Query: 154 KNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
              L      +++             +      + +++  ++ +  + +++ D A     
Sbjct: 147 FQRLCALRFEELLLSMGRQRLRLKNPQLAGDSLVTQVLNDMYKTYYRNYTIEDYAKRHNV 206

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           S  WL R F + TG++P +Y +  R+  A  LL+    ++GE+A  L +    +FS+ FK
Sbjct: 207 SVCWLIRRFKQVTGESPNQYLIQIRIRRARELLESSRLNMGEIASVLGYESPLYFSRQFK 266

Query: 273 HKFGYAPSAVLKNTDQ 288
              G +P    +   +
Sbjct: 267 QLQGVSPKRYREQRQK 282


>UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein, putative n=1
           Tax=Streptococcus sanguinis SK36 RepID=A3CL13_STRSV
          Length = 282

 Score =  175 bits (445), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 95/259 (36%), Gaps = 11/259 (4%)

Query: 39  TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98
            +A   Y          P + + +V    ++G G   + N     L       + P    
Sbjct: 19  FFAFCGYSKTEAHHSFGPAVRDVYVIHIVLEGRGTYSVGNQR-YDLQEGQGFVVPPGQSV 77

Query: 99  SYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN- 156
            Y  +    W   WM      +                    L E   L+    A + + 
Sbjct: 78  FYQADREEPWSYVWMGLGGRLLPRYLQDLGLQSGQWSFELTSLQEFKALVFESLAYEGSG 137

Query: 157 -LAVAFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIATLHASLQQRWSVADMAA 208
             A   L + +Y+++ L+    K+             +++++  L + L +  SV ++A 
Sbjct: 138 ITAELALQRQVYRFLELLSQRLKQTSLITESRRVNPYVQQVLELLSSHLPESLSVQELAQ 197

Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268
            +    ++L RLF    GK  KEY  D RL++A  LL     SV E+A+   F  +  FS
Sbjct: 198 KLALHPSYLSRLFKDEVGKGIKEYSNDLRLNMAADLLTGSQLSVEEIANKTGFAGTQSFS 257

Query: 269 KAFKHKFGYAPSAVLKNTD 287
           KAFK   G +P    K + 
Sbjct: 258 KAFKKARGQSPLNFRKASS 276


>UniRef50_C7G8V7 Putative raffinose operon transcriptional regulatory protein RafR
           n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8V7_9FIRM
          Length = 289

 Score =  175 bits (444), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 11/240 (4%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQY 110
               P I + ++  Y ++G G  L+ N  +  +        +P  +  Y+ E    WE  
Sbjct: 49  HAWGPGIRSCFIIHYVMKGAG-YLIVNHRKYHVKAGESFLTRPYTLIEYYPEEENPWEYM 107

Query: 111 WMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI-----KNNLAVAFLTKI 165
           W++F    + +     Q    N     ++  ++  L      +     + N A   L  I
Sbjct: 108 WVDFLGNQVENWVEHTQFEEKNPVCSLKQEEKILPLFLKLLEMDIYHQQRNEACGVLLSI 167

Query: 166 IYQWICLMYAD--GKKDPQRRQIEKLIATLHASLQQ-RWSVADMAATIPCSEAWLRRLFL 222
           +  ++ +   +  G+ D   +++E  +  +     +  + +  +   +  S   L RLF 
Sbjct: 168 LGVYLDIFPVECVGRSDEDEKRMEMAVLLIKNHYHKSEFHIQRLCEMLNISRVTLYRLFK 227

Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282
             TG +PK+Y L+ R++ A  LL+  G SV   A +  F DSF+FS+ FK   G +PS  
Sbjct: 228 SKTGISPKQYLLNYRIEQAKLLLRM-GTSVKNTAASCGFNDSFYFSRVFKEYTGSSPSRY 286


>UniRef50_B0MNH5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM
           15702 RepID=B0MNH5_9FIRM
          Length = 295

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 88/246 (35%), Gaps = 7/246 (2%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105
           R       K+     S   +YT +GCG + + N  +  L  N  ++L P   H Y+ E  
Sbjct: 46  RTSPEFHVKRDKGLTSHQFLYTAKGCGVLEVGN-RKYKLEKNSFMYLPPELPHEYYPEND 104

Query: 106 VWEQYWMEFTPTSMMDI----PVGQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAV 159
            W   WM F    +  I        + V  N ++  + +    +  L           ++
Sbjct: 105 EWNTCWMVFRGDFLKGIMNTMGFSGEMVATNADLNAFKKIFGRIYSLAADNLHNGEKCSL 164

Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
                ++           + +      +  +  ++       +++++A     S  +  R
Sbjct: 165 LIYNAVLAAKEIFGGKQEENNTGNLIADNAVRYINEHYSDDITLSELACLSGVSPQYFDR 224

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           +F       P EY    ++  A S+L     SV +++ +L +    +F   FK   G +P
Sbjct: 225 IFRERLNMRPMEYIARVKISKAKSMLLDSDISVTQLSKSLGYTGPTYFGIVFKKYEGISP 284

Query: 280 SAVLKN 285
           S   KN
Sbjct: 285 SEFRKN 290


>UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG84_SANKS
          Length = 297

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 96/276 (34%), Gaps = 20/276 (7%)

Query: 18  IPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLK 77
           +P+     V  +G+        +A  H        + +   A   V +    G G     
Sbjct: 36  LPVTSRLLVTDAGVF------PHAARH-------GRSRVSGAEQHVVLVCTDGAGWCRTP 82

Query: 78  NGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGEIY 136
            G ++ +     + L   + H Y  +    W  +W         ++             +
Sbjct: 83  AGTEV-VGRGDAVLLLAGEAHEYGADAEDPWTLWWFHVLGGDAAELVSAGHQASGGPVAH 141

Query: 137 NQELTEVAELIT---SPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKLIA 191
            ++   VA L++                 T   +  +  + A G++ P      +E+ + 
Sbjct: 142 LRDAAPVASLVSQVIDGLDAGTRAGTLQATGAAFHALTQVVATGRRSPGPSLSPVERALE 201

Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251
            L A+  +R  VA +AA +  S + L  LF  + G +P  Y    R+  A  LL     +
Sbjct: 202 HLRATSPRRTPVASLAAMVGLSTSRLGALFREHVGVSPNAYQSQLRMARARELLDSTDLA 261

Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           V  VA    F D  +FS+ F    G APSA    T 
Sbjct: 262 VAAVASACGFDDPLYFSRQFARVHGVAPSAYRGRTR 297


>UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella
           multacida DSM 20544 RepID=C9KN80_9FIRM
          Length = 285

 Score =  175 bits (443), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 105/258 (40%), Gaps = 14/258 (5%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWE 108
           P     P + +  +  Y  +G  K  + NG    L      F+ P     Y  +G   W 
Sbjct: 29  PGQVCGPRVRSYCLLHYITKGKCKFQV-NGMTYHLQAGQGFFIAPDFETRYETDGDEPWN 87

Query: 109 QYWMEFTPTSMMDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164
             W+      M  +     + Q + I++    ++ +  V +++   +    +    F   
Sbjct: 88  YIWVGAAGEEMKHLMHVLGLSQANPIFSCHQGDRLVHCVRDMLQHRQMTMTDHY--FRMS 145

Query: 165 IIYQWICLMYADGKKDPQ----RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
            +Y++I ++  + + +         I  ++  +   L +  S A++AAT+  + ++L  L
Sbjct: 146 TLYRFIAILSEERQVNQPLASVNSYIANVMTYVRHHLHEHMSTAEIAATMNLNRSYLSSL 205

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           F   TG T + Y    R+  A  LL+    S+  +A++  +  S   ++ F+  +G +P+
Sbjct: 206 FRSQTGMTLRSYIQLCRMTRAKYLLESTHLSIASIAESCGYEKSDSLNRTFRKTYGISPA 265

Query: 281 AVLKN--TDQHPTDASPH 296
              K+   DQ  +   PH
Sbjct: 266 DYRKSFLADQTQSSRKPH 283


>UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax=Clostridium
           perfringens RepID=Q0SUX5_CLOPS
          Length = 279

 Score =  175 bits (443), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 25/273 (9%)

Query: 36  LWHTYADEHYRV---------IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86
           LW  Y  E++ +           P       +  + V  Y  +G G     NG+  TL  
Sbjct: 4   LWKKYVKENFEMNVDECGIEQGIPGLGYNYEVLKNAVIHYVTKGYGTFKF-NGKVYTLKQ 62

Query: 87  NCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN-QELTEVA 144
             I  L       Y       WE YW+ F+ ++  +     ++ I N  + N +E +++ 
Sbjct: 63  GDIFILLKGMQVEYVASIDDPWEYYWIGFSGSNANEYL--NRTSITNSCVANCKENSKIP 120

Query: 145 ELI---------TSPEAIKNNLAVAFLTKIIYQWICLMYA--DGKKDPQRRQIEKLIATL 193
           ++I          +P    + L +  L  ++Y  I       + K       I+  +  +
Sbjct: 121 QIILNMCEISKTYNPSKSDDILLLKELYSLLYTLIEEFPKPFEYKDKELHTYIQDALNFI 180

Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253
           +++     +V ++A  +  S ++L ++F++  G +P+ Y ++ R+  A  LLK     +G
Sbjct: 181 NSNYMHSITVQEIADYVNLSRSYLYKMFIKNLGISPQRYLINLRMYKATLLLKGTKLPIG 240

Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           EVA ++ + DS  FSK F   F  +P     N 
Sbjct: 241 EVASSVGYSDSLLFSKTFSKHFSMSPLNYRNNQ 273


>UniRef50_P28809 MmsAB operon regulatory protein n=6 Tax=Pseudomonas aeruginosa
           RepID=MMSR_PSEAE
          Length = 307

 Score =  175 bits (443), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 98/263 (37%), Gaps = 8/263 (3%)

Query: 38  HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE---QITLHGNCIIFLKP 94
           +  +  HYR      +      +  + +Y  +G G + ++ GE   +  +    +++L P
Sbjct: 46  YPTSLGHYRRARD-HRMSRERHDEHLLIYCSEGQGLLRVREGEAWREYRVGSGDLLWLPP 104

Query: 95  MDIHSYHCEG-LVWEQYWMEFTPTS---MMDIPVGQQSVIYNGEIYNQELTEVAELITSP 150
              H Y  +    W  +W      S   +      + + + +  + +  L    +L+   
Sbjct: 105 GMAHDYAADDRQPWTIFWTHLRGDSATWLQHSAGYRDTPLRHWGLQHALLGGFEQLLEVR 164

Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210
            +             +   +C +            ++ L A +   L  R  +  +AA  
Sbjct: 165 HSGYRFQHFLLAASRLRSLLCQLPLLRPLREGSLDLDGLHAYMREHLHARLELERLAAFC 224

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             S+      +   TG+TP +++L  +++ A  LL     SV  V   + + DS++FS+ 
Sbjct: 225 NLSKFHFVSRYKAITGRTPIQHFLHLKIEYACQLLDSSDQSVARVGQAVGYDDSYYFSRL 284

Query: 271 FKHKFGYAPSAVLKNTDQHPTDA 293
           F    G +PSA  +   Q    A
Sbjct: 285 FSKVMGLSPSAYRQRVRQGEGGA 307


>UniRef50_Q5WK33 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii
           KSM-K16 RepID=Q5WK33_BACSK
          Length = 294

 Score =  174 bits (442), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 108/265 (40%), Gaps = 15/265 (5%)

Query: 37  WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLK-PM 95
           W T  D+ YR    +  ++  I    V  YT+ G G++ +  G    +      F+  P 
Sbjct: 30  WETQTDQAYRWDGTKRMEREKI----VFQYTLSGYGEL-VHEGTLYKVEAGQAFFVSLPS 84

Query: 96  DIHSYHCEGL--VWEQYWMEFTPTSMMDIPVGQQS---VIYNGEIYNQELTEVAELITSP 150
               Y+ E     WE  ++       + +    ++    +++ +  ++ +  + +L    
Sbjct: 85  AHCYYYPEEETEPWEFLYVTIEGKEALRLQKHMENKYGPVFSLQKDSEPIRRLFKLYAET 144

Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR---RQIEKLIATLHASLQQRWSVADMA 207
            A +   +    ++  Y++I   +   +  P++     + + I  + A+  +  ++ ++A
Sbjct: 145 AAGEIQDSYTG-SQKAYEFILSCFRFLEVPPKQVVKEPLARAIRYIEANYARPLTLEEIA 203

Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267
                S+ +  + F      TP  Y    R+  A SLL Q  +++ EVA  +   D  +F
Sbjct: 204 QEAGWSKYYFIKQFKTELNITPMNYVTIIRIKKAASLLAQTDDTIAEVAYQVGMDDPNYF 263

Query: 268 SKAFKHKFGYAPSAVLKNTDQHPTD 292
           +K FK   G + S   KN D H  D
Sbjct: 264 TKVFKKTVGVSASKFRKNEDNHLID 288


>UniRef50_B8KL56 AraC protein, arabinose-binding/dimerisation n=1 Tax=gamma
           proteobacterium NOR5-3 RepID=B8KL56_9GAMM
          Length = 299

 Score =  173 bits (438), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 111/284 (39%), Gaps = 20/284 (7%)

Query: 14  TPYNIPLLINENVISSGI-SLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72
           TP  +   ++++ +++G       ++  AD H+       +++    +  + ++  QGCG
Sbjct: 25  TPGFLLDALDKHPLTAGCYPAAMGYYPNADGHF-----MHRER---HDDNLLMFCTQGCG 76

Query: 73  KILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMD----IPVGQQ 127
            +    G  +++     + L     HSY  +    W  YW+ F      D    + +   
Sbjct: 77  WVQTPAGR-VSVDAGDTVVLPQGLTHSYAADERTPWTLYWVHFQGRDAQDFVEHLLIEDG 135

Query: 128 SVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR--- 184
             I++G +    LT   +++T         A       +   +        +   +    
Sbjct: 136 YRIHSG-VEPSLLTGFEQMLTVGSTGYRLDAFIGAANRLRHLLAEFALCRDRQRGQNMGA 194

Query: 185 -QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
            ++ +L + +   +    S+ ++AA    +       +   TG +P  ++L  +++ A  
Sbjct: 195 MRLLELQSFMRERVSSSLSLQELAAFTGLTPQHFATRYKAETGYSPMRHFLHMKMEAACR 254

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           LL    +SV  +A  L + D  +FS+ F+   G +PS   ++  
Sbjct: 255 LLDSTQHSVKFIAANLGYVDPLYFSRMFRQTVGLSPSQYRESQR 298


>UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI000178AA55
          Length = 275

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 103/248 (41%), Gaps = 13/248 (5%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLV 106
            WP  K+     +     + + G G + + + E   +    ++ +      SY    G  
Sbjct: 30  CWPEWKEFDYTVSYNKLYFILDGEGWVKIGDEELYPV-PGQLVLMPARTRQSYSVISGRP 88

Query: 107 WEQYWMEFTPT-------SMMDIPV--GQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
           + +YW  F+ T       S +++P             ++ Q +        +    + ++
Sbjct: 89  YLKYWSHFSATVGDSDVFSWLNVPHCYDLSGNAEMPALFQQLVDAHRSDTLAARLREKSV 148

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
            +  L+++       ++AD  +D    ++ K+   +   L +  ++  MA T+     + 
Sbjct: 149 MLDILSRVFEHQQPQIHADKMED--MGRLHKVQQYIKNHLHEEITLEQMAGTLHLHPNYF 206

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
            + F R+ G TP++Y    R++ A  +L+    S+ E+AD   F  + +FSK F+ + GY
Sbjct: 207 IKYFKRHFGITPQKYLSLKRMEQAKLMLRTTSLSIKEIADATGFESANYFSKTFRKEVGY 266

Query: 278 APSAVLKN 285
           +PS    N
Sbjct: 267 SPSEYRNN 274


>UniRef50_Q5WK82 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii
           KSM-K16 RepID=Q5WK82_BACSK
          Length = 297

 Score =  172 bits (436), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 110/290 (37%), Gaps = 18/290 (6%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
            +    + T +  P     N+ + G      W    D  Y   W  +K+     +S +  
Sbjct: 7   FTRGSHSFTFHLFPETGLLNLWNVG------WEVQTDTSY--YWDGNKRA-KDNDSIIFQ 57

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLK-PMDIHSYHCEG--LVWEQYWMEFTPTSMMDI 122
           YT+ G G + +   E+ T+  +    +  P D   Y+ E     WE  ++     S+ DI
Sbjct: 58  YTIAGSGVLEI-GKERYTVGQHQAFIVSVPSDHRYYYPENAKEPWEFIYISLQGASVQDI 116

Query: 123 ---PVGQQSVIYNGEIYNQELTEVAELITS--PEAIKNNLAVAFLTKIIYQWICLMYADG 177
               + +   I +    +  +  +  +      + +++    A              A+ 
Sbjct: 117 WQRLIQKSGPIVSLPPNSPLIRSLYSIYADTKADGLRDPYLAATQGYQFLIECFRAMAEE 176

Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
           +   +    ++ +A + A   ++  + ++A  +  S   L RLF +    TP  Y  D R
Sbjct: 177 RPQNEPYHYQRALAYIEAHYHEQICLDNIAEEVGVSRYTLTRLFKKQLHTTPISYVTDLR 236

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +  A SLL     ++ ++A  + + D  +F K F+   G + +   +N D
Sbjct: 237 MRKACSLLLHTNRTIKQIAADVGYPDDNYFHKVFRRYTGSSATQFRRNGD 286


>UniRef50_A8YTU0 Msm operon regulatory protein n=3 Tax=Lactobacillales
           RepID=A8YTU0_LACH4
          Length = 283

 Score =  172 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 87/249 (34%), Gaps = 9/249 (3%)

Query: 47  VIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-L 105
              P     P         +  +G G + ++ G    +H N    +   ++  Y  +   
Sbjct: 32  YCNPGWSYGPKRREYHFIHFVKEGKGTLTIE-GHTFHIHKNQCFIVPAGEVSLYAADKKD 90

Query: 106 VWEQYWMEFTP---TSMMDIPVGQQSV---IYNGEIYNQELTEVAELITSPEAIKNNLAV 159
            W+  W+ F     +  +   +   +    I +  +Y Q++ ++  L     +       
Sbjct: 91  PWKYSWIGFLGIESSRYVQQLISNNNFVIDIKDAVLYEQQIRKIISLKHDSLS-SALKMT 149

Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
               +I    I  +    +         +    +  +      + D+A  +  +   L  
Sbjct: 150 GITYEIFGSLIDEVNDTEEVKTTNSLATRAKHYMDLNYYDAIKIKDIANFLNVNVNCLSS 209

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            F      +PK+Y +  ++  A  LL    N++  VA+++ F DS  FSK FK     +P
Sbjct: 210 AFKEEFNLSPKQYLMKLKIRKAKKLLSTTNNTITVVANSVGFNDSLAFSKVFKQYTQSSP 269

Query: 280 SAVLKNTDQ 288
           S+  K   +
Sbjct: 270 SSYRKQATE 278


>UniRef50_UPI00017450D3 transcriptional regulator, AraC family protein n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI00017450D3
          Length = 285

 Score =  172 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 88/266 (33%), Gaps = 10/266 (3%)

Query: 38  HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97
           +T     +         +         VY ++G G + +  G    +    + ++     
Sbjct: 21  YTTVRAGHLTADKTHHIERETLAGHELVYCLRGSGTVRVA-GRVHRVKARGLYWVSCWHP 79

Query: 98  HSYHCEG-LVWEQYWMEFTP------TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSP 150
           H Y  +    WE YW+           S++ I       + +         +   ++ SP
Sbjct: 80  HQYQADPIQPWELYWVRIEGPGLDALASLLRIRETPVFPLLDDAATKACFMDAFNILESP 139

Query: 151 EAIKNNLAVAFLTKIIYQWICLMYADGKKD--PQRRQIEKLIATLHASLQQRWSVADMAA 208
                      + +++       + DG +D  P    +E+ +  +         ++D+A 
Sbjct: 140 SPNAPASMHVAVARLLSLLYENRFKDGGQDTEPVPSTLERPLIRMRQHYADALRLSDLAH 199

Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268
               S +   R F R  G +P ++    R++ A   L      + E+A    + D + FS
Sbjct: 200 LAGMSVSHFIRTFKRTMGTSPIDWLRRERMNQAKHRLIDTDEPIKEIARQCGYRDPYFFS 259

Query: 269 KAFKHKFGYAPSAVLKNTDQHPTDAS 294
           K FK   G  P+           + S
Sbjct: 260 KDFKKLTGLPPTDYRVQERGRAHETS 285


>UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=Lactobacillus
           salivarius RepID=Q1WTL6_LACS1
          Length = 278

 Score =  172 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 95/259 (36%), Gaps = 11/259 (4%)

Query: 39  TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98
             A+          K  P +   ++  Y + G G           LH      ++P    
Sbjct: 18  QLANVGRSDTLSGHKYGPAVRPYYLIHYILAGSGTFKTDQS-IYKLHAGQGFLIEPGQET 76

Query: 99  SYHCE-GLVWEQYWMEFTP----TSMMDIPVGQQSVIY--NGEIYNQELTEVAELITSPE 151
           +Y  +    W   W+ F+       M  IP+ Q+  I+  N      EL  +  L +   
Sbjct: 77  TYIADKNTPWSYVWIGFSGNFADQLMQQIPLNQREPIFSLNDPKRLIELVNLLLLKSVNS 136

Query: 152 AIKNNLAVAFLTKIIYQW--ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209
             K  L +++L + +       ++  +         +EK I+ ++ +     S A +A  
Sbjct: 137 TTKKLLNLSYLLEFLSIISNATIISRESTTSISDIYVEKAISLINKNFP-NISAASLAQM 195

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
           I    ++L + F + TG T + Y  + ++  A  L++    S+ E++    +      ++
Sbjct: 196 IGLDRSYLGKRFKKVTGMTLQTYLKNYKITQARHLIESTNLSLLEISQRCGYQRVDSLAR 255

Query: 270 AFKHKFGYAPSAVLKNTDQ 288
            FK  +G  PS       +
Sbjct: 256 TFKATYGLTPSDFRLQQKE 274


>UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=Subdoligranulum
           variabile DSM 15176 RepID=D1PN84_9FIRM
          Length = 297

 Score =  171 bits (434), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 89/256 (34%), Gaps = 11/256 (4%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
            Y    P     P+     +  + + G G + + +G    L       +    I  Y  +
Sbjct: 44  GYEACAPGHHYGPIYRAYQLIHFILSGKGVLEI-DGHTFQLGAGDAFLIPSGKIAYYAAD 102

Query: 104 GL-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158
               W   W+ F   +       +            +  Q+   + E I S E       
Sbjct: 103 AADPWCYTWINFLGINSQMYTYQLIASSPEPYILRGLDTQKYHALIEQILSLEGTATARY 162

Query: 159 VAFLTKIIYQWICLMYADGKKDP----QRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
                 ++ Q +  ++ D   D     +    ++    L  +  ++  + ++A  +    
Sbjct: 163 FKG-NGLLLQVLGELFQDAGFDERYWGKNSVADETKFYLDVNYSEKLKLKEVAHNLGVHP 221

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
            +L R+F    G TPK+Y L+ +L  A  LL+     V  +A ++ F D   FSK FK  
Sbjct: 222 NYLTRVFHEKYGVTPKQYLLNLKLQKACQLLRTTDLPVAVIAGSMGFDDGMAFSKLFKKT 281

Query: 275 FGYAPSAVLKNTDQHP 290
           +  APS   +     P
Sbjct: 282 YSCAPSDYRRKEKAAP 297


>UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=Bacteria
           RepID=C7G788_9FIRM
          Length = 292

 Score =  171 bits (434), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 97/274 (35%), Gaps = 12/274 (4%)

Query: 24  ENVISSGISLISLWHTYADE-HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL------ 76
            +VI++  +       +  E  Y         +    NS++    + G G++        
Sbjct: 18  RSVINTPSAFTRKNFFHIQEAGYLKSLKSHLSRRSELNSYLFFVVLSGSGEVTYREPLSE 77

Query: 77  KNGEQITLHGNCIIFLKP-MDIHSYHCEGLVWEQYWMEFTPTSMMDI---PVGQQSVIYN 132
                 T H     FL    +      +   WE  W+ F                +  + 
Sbjct: 78  GGMISSTAHAGDCFFLDCSGEYTHISTDEDPWELLWIHFNGPEARAYYTYFRDHHNWHFR 137

Query: 133 GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR-QIEKLIA 191
              + + +  +  +I   E   ++  +    +II+    +     +K+     +++ ++ 
Sbjct: 138 SAHFTELINAIESIIRYNEEPTDDTDLLTAQQIIHILTLICTESNEKNELLSDKLKTILH 197

Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251
            L     +  S+  +A     S+ +L R F +  G T  +Y L  R++ A  LL+   +S
Sbjct: 198 YLDEHYTENISLDQLAEQFFISKYYLSREFKKEFGTTVIQYVLAKRINNAKELLRYSNSS 257

Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           + E+A      D+ +F+K F+   G   S   K 
Sbjct: 258 IEEIAHLCGIDDASYFNKVFRKMEGCTASEYRKR 291


>UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CVZ4_PAESJ
          Length = 288

 Score =  170 bits (432), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 106/262 (40%), Gaps = 16/262 (6%)

Query: 30  GISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCI 89
           G+  +      A  +Y V        P +   +   + + G   +    GE + L    +
Sbjct: 24  GLWPLRTGRNIAKANYSV-------GPRVIECFSFHFVLNGSVTLSSM-GETVILPKGSM 75

Query: 90  IFLKPMDIHSY----HCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVA- 144
             L P   HSY    +      + +W+ FT +    +        +   + ++  TE+A 
Sbjct: 76  FCLFPDVKHSYWITQYDSASPLKMHWLAFTGSQAEMLVRRIGLTEHKPYLRSRLTTELAN 135

Query: 145 ELITSPEAIKN--NLAVAFLTKIIYQWICLMYAD-GKKDPQRRQIEKLIATLHASLQQRW 201
           +L    E +KN        L  ++YQ   ++     +   ++  ++  +  +     +  
Sbjct: 136 QLQACMERMKNWQKDGDLQLQMMLYQLFEMLSRPLPEASEEKDWLKACLQYMQTHYAEGI 195

Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261
           SV D+A       + L   F +  G +P+EY +  R++ A+ +L+ +  S+ +++ +L +
Sbjct: 196 SVTDLAEWSGMHRSHLSSRFKQSFGISPREYLIMLRMERAVEMLQSRTLSITDISLSLGY 255

Query: 262 FDSFHFSKAFKHKFGYAPSAVL 283
            D + FS+AF    G +PS   
Sbjct: 256 TDLYTFSRAFSTYTGMSPSNYR 277


>UniRef50_O33813 Lactose operon transcription activator n=4 Tax=Staphylococcus
           RepID=LACR_STAXY
          Length = 279

 Score =  170 bits (432), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 92/237 (38%), Gaps = 14/237 (5%)

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121
           V     QG G      GE   L    I  L+      Y       W  YW+      +++
Sbjct: 40  VLHIVTQGEGTFSYA-GETYHLTAGDIFLLERGMEVEYKPSFSNPWTYYWVGMNGKQILN 98

Query: 122 IPVGQQSVIYNGEIYNQELTEVAELIT-----SPEAIKNNLAVAFLTKIIYQWICLMYAD 176
             + + S++ +  I  Q+ T++  +I      S     NN     + + +YQ +  +   
Sbjct: 99  Y-LSRCSIVDSHVILGQDTTDIKNIIQLICKLSQSIESNNSNDILIMQYLYQLVYTLQEK 157

Query: 177 GKK------DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
             K      D     I+  +  ++ + Q+  +V D+A ++  + + L +LF +  G +PK
Sbjct: 158 FPKIFSVQVDIVNEDIQHAVDFINTNYQKHITVEDVAKSVNITRSHLYKLFKKNLGCSPK 217

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           EY    R+  A  LL      + +++  + + D   FSK F   F  + S    +  
Sbjct: 218 EYLTYIRMYHASQLLIHTSTLISDISRQVGYKDPLLFSKNFTKHFEISASEYRHHFS 274


>UniRef50_Q47XU2 Transcriptional regulator, AraC family n=1 Tax=Colwellia
           psychrerythraea 34H RepID=Q47XU2_COLP3
          Length = 305

 Score =  170 bits (432), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 4/228 (1%)

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMD 121
              + T  G GKI L N E   +    I+ L       Y   G  WE  W+     S   
Sbjct: 64  HYLISTHAGEGKIKLGNNE-YLVKPGSIVLLPAGTPFLYELSGEYWEMCWLLLHDCSEYK 122

Query: 122 IPVGQQSVIY---NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178
                   +Y   N E   Q ++ + E        ++++ +  +  ++YQ    +    +
Sbjct: 123 FVHQLHPSVYSSINAERLYQTMSLIREFQHGESIYQSDIILRLVEVLVYQIAQTLNMGQQ 182

Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
              Q+++   LI  ++  LQ  W+V  +AA +  SE    RL  +  G TP +     RL
Sbjct: 183 LTKQQQKFHSLIRRVNKQLQLSWTVKQLAAEMHMSEPHFFRLCKKEMGMTPIKLLTHTRL 242

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           + A  LL+    ++ ++ADT+ + DS  F+  FK  +G +P    K  
Sbjct: 243 EYACYLLRYTQYNLDQIADTVGYGDSASFAHRFKKDYGLSPGRWRKEQ 290


>UniRef50_A4AC34 Transcriptional regulator, AraC family protein n=1
           Tax=Congregibacter litoralis KT71 RepID=A4AC34_9GAMM
          Length = 292

 Score =  170 bits (431), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 102/282 (36%), Gaps = 16/282 (5%)

Query: 14  TPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGK 73
           TP  +   + ++ ++ G    ++        + +   +        +  +     +G G 
Sbjct: 18  TPGFLLEALEKHPLTCGCYPTAMGFYPKACGHFMRREQH-------DDNLLFLCTEGRGF 70

Query: 74  ILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDI---PVGQQSV 129
           +  + G    +    ++ L     HSY   E   W  YW+ F  +   D     +     
Sbjct: 71  VQTQRG-GFAVATGDMVLLPRDQEHSYAANEQDPWTLYWVHFKGSKAGDFIDHLLPDDDF 129

Query: 130 IYNGEIYNQELTEVAELIT----SPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ 185
             +  +    LT   +++T             A   L  ++ ++         ++  R  
Sbjct: 130 RVHSGVEPSLLTGFEQMLTVGSTGYSLDAYIGAANRLRHLLAEFALCRDRQRSQNMGRLH 189

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           + +L + +   +    S+ ++AA    +       +   TG +P  ++L  +++ A  LL
Sbjct: 190 LRELQSYMREHVSSSLSLGELAAFTGLTPQHFASRYKAETGYSPMRHFLHMKMEAACRLL 249

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
               +SV  +A  L + D  +FS+ F+   G +PS   ++  
Sbjct: 250 DSTQHSVKTIAVMLGYVDPLYFSRMFRQTVGLSPSQYRESQR 291


>UniRef50_C6D787 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D787_PAESJ
          Length = 267

 Score =  170 bits (431), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 87/237 (36%), Gaps = 6/237 (2%)

Query: 51  RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQ 109
           R K  P + + +   + + G G +   N +Q  L       + P     Y+ +    WE 
Sbjct: 24  RHKWGPGVRDIYALHFIISGKGTLETNN-QQYPLSTGDSFMIFPKTEIYYYPDPEDPWEY 82

Query: 110 YWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169
            W+EF       + +    +  +  +      ++                   T+   + 
Sbjct: 83  VWIEFKGDEAKRL-IAMTGLESDKPVVAACPADLKPYFPQVVGADTRHFEKMRTEAQLRL 141

Query: 170 ICLMYAD--GKKDPQRRQIEKLIATLHASLQQR-WSVADMAATIPCSEAWLRRLFLRYTG 226
           +   Y +   ++      ++     +  +  +   +V+D+   +    ++L RLF   +G
Sbjct: 142 LLSYYVEFYPREAQPIDYVQLAKEYIMINYWRTTLTVSDIVNAVSLERSYLFRLFKEASG 201

Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            +   Y    R++ A  LL   G S+  VA ++ + D  +FSK FK    Y PS  +
Sbjct: 202 MSVSGYMTAYRMERARELLMSSGLSIKSVACSVGYKDQLYFSKVFKKATSYTPSEYM 258


>UniRef50_A4XK77 Transcriptional regulator, AraC family n=2 Tax=Clostridia
           RepID=A4XK77_CALS8
          Length = 273

 Score =  170 bits (430), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 49  WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWE 108
           +     +      +  ++T++G G  L+ +G++  +  N   FL P   H Y      W 
Sbjct: 27  YQEHIIRKNGHPDYHYLHTLEGSG-YLIVDGQKYLVDENTAFFLYPGIAHEYFAATSKWS 85

Query: 109 QYWMEFTPTSMMDIP--VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166
             W+ F   +   I   +G +          + L  + E I++  ++ N +     +++I
Sbjct: 86  TIWLTFNGPASETILKTMGIRPFEIFKLTNKKYLEGMLEAISNKASVYNYIVSIECSQLI 145

Query: 167 YQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
           Y +I  M+ + +   ++       ++  ++  +  + ++  S+ ++++ +  S   L  +
Sbjct: 146 YSFILHMFLNLQNKIEKNFENNYLKLLPVLQYIEENYKKAISLDEISSIVNLSPQHLCTV 205

Query: 221 FLRYTGKTPKEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           F +    TP EY +  R+  A  LL +Q    + EV   + F +  +F   FK   G  P
Sbjct: 206 FKKTFQTTPYEYLIRVRIQKAKELLMRQSSIQIKEVCYEVGFKNPSYFCYMFKKLEGITP 265

Query: 280 SAVLK 284
               +
Sbjct: 266 LQFKR 270


>UniRef50_A0QZE6 MmsAB operon regulatory protein n=1 Tax=Mycobacterium smegmatis
           str. MC2 155 RepID=A0QZE6_MYCS2
          Length = 295

 Score =  170 bits (430), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 94/256 (36%), Gaps = 14/256 (5%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             +       + +   A   V +    G G    + G    +     + L     H Y  
Sbjct: 44  GFFPRATRHGRSRSRGATEHVVMVCTAGAGWCRTEEG-AFDVGVGDAVLLPKGRAHMYGA 102

Query: 103 -EGLVWEQYWMEFTPTSMMDI-------PVGQQSVIYNGEIYNQELTEVAELITSPEAIK 154
            E   W  +WM  T +   ++       PV     + +       +++V +++       
Sbjct: 103 AESDPWTLWWMHVTGSDSAELIAAARVSPVSPVVHLVDPAPATSLISQVIDMLADASTTA 162

Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKLIATLHASLQQRWSVADMAATIPC 212
             +  A      +  + ++ A G++    +   +++ +  L ++  +R  VA +AA +  
Sbjct: 163 GLIGAAGAA---WHALTVIAATGRQRSTGEADPVDRALEHLRSTSPRRTDVAALAAIVGL 219

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           S + L  LF + TG  P E+    R+  A  LL     ++  VA    F D  +FS+ F 
Sbjct: 220 STSHLNALFRQRTGIGPLEFQQQLRMSRARELLDTTTLTIAAVARAAGFNDPLYFSRQFA 279

Query: 273 HKFGYAPSAVLKNTDQ 288
              G +PSA  +    
Sbjct: 280 KVHGQSPSAYRQRHQN 295


>UniRef50_B8H8F4 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter
           chlorophenolicus A6 RepID=B8H8F4_ARTCA
          Length = 288

 Score =  170 bits (430), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 110/280 (39%), Gaps = 9/280 (3%)

Query: 10  VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69
            +N+    +P  +  + +S  I+   +        +       + +P  A   + +  V 
Sbjct: 7   FQNQRLVVVPRPLVRDALSRPITRHLV--VTDAGVFPAAADHGRHRPDGAAETIVILCVA 64

Query: 70  GCGKILLKNGEQITLHGNCIIFLKPM--DIHSYHC-EGLVWEQYWMEFTPTSMMDIPVG- 125
           G G +    G +  +     + L     + H+Y   EG  W  +W       + D+  G 
Sbjct: 65  GAGWVET-GGMRTAVGAPAAVVLPGGTGEAHAYGAAEGDPWTIWWCHVRGADVPDLLEGA 123

Query: 126 --QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR 183
             + + +      ++    + E+IT+ E  ++   +     + ++ +  +  D +   + 
Sbjct: 124 GVRGAQVIPLVAVDRLTAMLDEIITALEKDQSPARLMATAGMAWRLLTALAIDRRLPEKG 183

Query: 184 RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS 243
             +++ +  L   +     +AD+AA +  S ++L +LF   TG     ++   ++  A  
Sbjct: 184 TPLQQAMNYLEERVDGSVRLADLAALVGVSSSYLSKLFREATGGGVLAHHTALKMARARL 243

Query: 244 LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           LL      + EV   +   D F+FS+ F+   G +PSA  
Sbjct: 244 LLDTTDLPIAEVGREIGLQDQFYFSRQFRRLHGVSPSAYR 283


>UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0ZDD0_BREBN
          Length = 298

 Score =  170 bits (430), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 93/240 (38%), Gaps = 10/240 (4%)

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWMEFTPTS 118
           ++V  YT+ G G++ +   +   L       ++    H Y+   E   WE  ++    + 
Sbjct: 54  TYVFQYTISGSGRLDIGE-KSYPLRAGKTFLVEVPSCHRYYFSGESDHWEFVYITLVGSQ 112

Query: 119 MMDI------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL 172
             +         G    I       Q L ++ + +          + A   + + +    
Sbjct: 113 ATECWEYIQANGGPVLSIPPEAKLVQLLLKIYQEVCEKRVTDLYCSSAKAYEFVMECYRF 172

Query: 173 MYA-DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
           M   D        +I + +  + A  ++  S+ D+A     S  +L  LF  Y   TP +
Sbjct: 173 MKNIDNPSKQVPDRISEAVCFIQAHYKETISLGDIANAAGLSRYYLINLFREYLNTTPLQ 232

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPT 291
           Y    R++ A+ LL Q   SV ++A  + + ++ +F+K FK   G +P    +  +  PT
Sbjct: 233 YITKLRIEKAMDLLTQTNLSVNDIALAIGYANANYFNKVFKKLIGTSPGQFRECKNSLPT 292


>UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10
           Tax=Rhizobium/Agrobacterium group RepID=B5ZUS0_RHILW
          Length = 274

 Score =  169 bits (429), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 7/245 (2%)

Query: 51  RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY 110
           R         S+  V   +G G +      +++L G  + +L P   HSY  +   W++ 
Sbjct: 29  RHAVTDRKLPSFAVVLVERGQGWLETAASGRLSLTGPALFWLFPNRAHSYSPDEDGWDER 88

Query: 111 WMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAEL-------ITSPEAIKNNLAVAFLT 163
           W  F  +   D    +     +  +    L +VA L       +     +    A   L 
Sbjct: 89  WALFEGSFTRDFVRLRIIAERHPVVALHRLDDVARLFGTLHADLLDDTHLGQASAALMLH 148

Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
           +I+           ++  +R  +  ++ TL     Q   +A  AA    S A LRR F  
Sbjct: 149 RIVISAARQAIGAAERRQERPDMAVIVETLRRRAMQPLDLAAFAAEHQMSPATLRRRFTL 208

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            TG  PK + L AR+D A  LL      +  VA  +   D F+FS+ F  + G +P    
Sbjct: 209 ETGLPPKAFQLRARMDHAKQLLATTDEKIEAVAAMIGLEDPFYFSRVFHEREGCSPREFR 268

Query: 284 KNTDQ 288
               +
Sbjct: 269 ARYRR 273


>UniRef50_B0N996 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
           35704 RepID=B0N996_EUBSP
          Length = 258

 Score =  169 bits (429), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 85/237 (35%), Gaps = 5/237 (2%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYW 111
           + +      +  +Y  +G G   L   +   L    I+  +P +  +Y +      E YW
Sbjct: 11  QNRAAGRVDYQLIYIHKGAGHYYLH-KKWENLSAGNILLFRPHEPQTYSYYFEEHPEIYW 69

Query: 112 MEFTPTSMMDIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQ 168
           + FT     +I          I    +      E+   +   +     + ++   +I+  
Sbjct: 70  IHFTGNECKEIIQKYNLHNCYIGEHSLLKTLFQEIIIELQIKKPYFEEMVLSNFLQILAT 129

Query: 169 WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
                            I +L+  L+      W++  MA     S  +   LF +  G  
Sbjct: 130 IARSHQQILSPLENDFSINRLVIQLNQKYMDDWNIESMAEYCKLSTGYFSHLFKKRMGSA 189

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           P +Y  + R++ A  L+     ++ ++A  + F DS +FS+ FK   G  P    ++
Sbjct: 190 PMKYLTELRIEKAKELIATNSMNLSDIAQMVGFTDSLYFSRVFKKTTGIPPKEFQQS 246


>UniRef50_B9K0A2 Transcriptional regulator AraC family n=18 Tax=Rhizobiales
           RepID=B9K0A2_AGRVS
          Length = 314

 Score =  169 bits (429), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 22/235 (9%)

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121
           V  +T+ G G +  +N       G  ++ L P + H Y  E G  WE +W+       + 
Sbjct: 59  VLQHTISGAGNLRYENSTYRVTPGQTLLVLVPHN-HRYWLEPGGRWEFFWISMNGEEALR 117

Query: 122 I------------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169
           I             + QQ+V +  +   + +   AE      AI    A+A    +    
Sbjct: 118 IHNAILTAMGPIFNLNQQTVEHLADCSQRLIAGGAETPGRASAIAYEAAMALYDDVFGSH 177

Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229
             L         + R ++ +I  + A+L Q  SV  +AA    S A   R+F    G  P
Sbjct: 178 PTL-------SAEYRTMQHVIDHISANLDQSLSVEQLAAVSGLSRAHFSRVFAASEGMPP 230

Query: 230 KEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            E+ L  RL  A+ LL K    SV E++    F +  +FSK F+  FG +P+   
Sbjct: 231 AEFVLHKRLKRAVKLLTKGSHLSVKEISTMCGFEEPNYFSKVFRRHFGASPTEFR 285


>UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CS68_PAESJ
          Length = 288

 Score =  169 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 97/243 (39%), Gaps = 7/243 (2%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQY 110
             ++  +   W  VY   G G   + +GE   +    +   +P   + Y  + G  W++Y
Sbjct: 44  HFRQGAVFQYWAIVYIAGGSGTYRVDHGEAQRVTAGSLFLFQPGFHYDYGPDPGGYWDEY 103

Query: 111 WMEFTPTS----MMDIPVGQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAVAFLTK 164
           +     T     +   P+   +V++ GE       +  +  L+ S      + A   L  
Sbjct: 104 YFTIEGTRYREWLEHWPILPNTVMHPGEDASSQNRIDRIFALMDSGTPADADRAALTLES 163

Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           ++Y W+    +      +  ++ +L+  L  +L + +  A  A     + + LRR    Y
Sbjct: 164 LLYDWVQSCQSSPAAQGKTARLAQLLEALSGTLHEPFDAAAFAERHHWALSTLRRTVSEY 223

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           TG    EY    ++  A + L     +V E+A  L + D F+FS+ FK   G AP    +
Sbjct: 224 TGFALHEYVHRLKMAEAKNRLLNTEQTVKEIAAALGYGDVFYFSRLFKKITGEAPRLFRR 283

Query: 285 NTD 287
           N  
Sbjct: 284 NMR 286


>UniRef50_A0Y944 Transcriptional regulator, AraC family protein n=1 Tax=marine gamma
           proteobacterium HTCC2143 RepID=A0Y944_9GAMM
          Length = 272

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 99/277 (35%), Gaps = 21/277 (7%)

Query: 22  INENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80
           + +N ++      S  ++ YA  H        +      +  + +Y   G G +     +
Sbjct: 5   LRQNPLTRACYPTSFGYYPYAKGH--------QMLRDDHSDNLLIYCEDGNGHVKTD--K 54

Query: 81  QI-TLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQQ-------SVIY 131
               +    +I L     H Y   +   W  YW+ F       +            + I 
Sbjct: 55  FYGPVTKGDVILLPSGHAHHYWASDDNPWTIYWVHFDGLQANQLIKELDFDAEQVVASIG 114

Query: 132 NGEIYNQELTEVAELITS-PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLI 190
              +   +   +  L  S       N A A   +I+Y     + +          +++L 
Sbjct: 115 QQPLLASDFNRLLSLRQSGYRQTVFNYAAALTRQILYFLALQIRSSNTLRRHNFNLDELR 174

Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250
           + +  +++    +  MAA    S       + + TG +P ++++  +++ A  LL    N
Sbjct: 175 SLMLENIEGDLDLDTMAACAQLSRHHFADKYKKLTGISPVKHFIHLKMERACYLLDTSNN 234

Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           S  +V+  L + D  +FS+ FK   G +PSA  K   
Sbjct: 235 SAKQVSAHLGYTDPLYFSRLFKKVIGISPSAYRKGLR 271


>UniRef50_D1N947 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N947_9BACT
          Length = 303

 Score =  168 bits (426), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 12/234 (5%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFT 115
            +   +   + + G G+  ++NG +  L     + + P D + Y   + L + +  + F 
Sbjct: 56  RLFEFYSLSHLISGGGRGWIENGRETDLTPGQAVVIAPGDRNRYGGSDTLPYVEDAVRFC 115

Query: 116 PTSMMDIPVGQQSVIYNGEIYN----QELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC 171
             +     + + + + +  IYN    + L  + EL   P A     A   L K++     
Sbjct: 116 GPAAD---MMRNAGVISSGIYNLGGVRRLLPLIELAQDPSADAQINANIALQKLLVDL-- 170

Query: 172 LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
             Y + ++      +E+L+A + +     W+V ++A     S   LRR FLR+TG  PK 
Sbjct: 171 --YNEHRRRNTLTPMEELVAEIKSRPDHWWTVEELAEFCNLSTDQLRRNFLRHTGMRPKR 228

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           Y  + +L  A  LL      +  VA    + D +HFS+ FK+  G +P    + 
Sbjct: 229 YLEELKLRQAAELLVSSPLPIAVVAAKFGYADPYHFSRRFKNLTGVSPERYRRE 282


>UniRef50_A4BIK9 AraC-type DNA-binding domain-containing protein n=1 Tax=Reinekea
           blandensis MED297 RepID=A4BIK9_9GAMM
          Length = 271

 Score =  168 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 7/246 (2%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
           H R  +  ++  P I      ++T  G G I  ++GEQ  +    +  +       +  E
Sbjct: 32  HLRPPYEVERMDPSIHT---LLFTSSGTGHITTEHGEQ-AIEPGSMTVIPAHTPARFEIE 87

Query: 104 GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163
           G  W+  W    P    +  +   + +            +  +I     +  +   A   
Sbjct: 88  GDRWDMCWFLLLPAMHWNQWMPDVAEVRPTGQAPAVF-HLCHVIDQERYLDASYPKASFQ 146

Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
           K+       + A+  + P R  +    A +  SL + W+V  +A     SE    RL   
Sbjct: 147 KLASYIELNLKANQPETPDR--LSAAFAQVEQSLHKPWTVGQVANLCYYSEPHFYRLCQE 204

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
             GK+PK+     R+D A  LL+Q    + E+A  L F D F+FS  FK + G +PS   
Sbjct: 205 RFGKSPKQIIRQLRMDRARQLLEQTDWPLAELAGRLGFSDQFNFSNRFKRETGLSPSEYR 264

Query: 284 KNTDQH 289
               +H
Sbjct: 265 IKHAEH 270


>UniRef50_C4ZBP1 Two-component response regulator n=2 Tax=Clostridiales
           RepID=C4ZBP1_EUBR3
          Length = 297

 Score =  167 bits (424), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 97/247 (39%), Gaps = 15/247 (6%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKNGE-QITLHGNCIIFLKPMDIHSYHCEG-LVWEQY 110
             +P     +  +Y   G       N E +  +    I+  +P ++  Y   G    + Y
Sbjct: 52  TYRPRGRLDYQIIYISSGLVHFHFDNPENETIIPAGHIVLFRPKELQKYEFYGKDKTQIY 111

Query: 111 WMEFTPTSMMDIP-----------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159
           W+ FT + + +                 + +   +++ + +TE+     + E +   L  
Sbjct: 112 WLHFTGSDVKNTLRKYGFTDNKRVFNVGTSLEYEQVFKRIITELQRCQDNYEEMLMLLLR 171

Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
                II+          + +    Q++  I   + +  +  +V + A++I  S +W  R
Sbjct: 172 H--LLIIFNRKITTEHVIRNEFLDSQMDTAITYFNTNYNRSINVEEYASSIGMSISWFIR 229

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            F +YTG TP ++    R+  A  LL+    S+ E+A  + + +  +FS+ F  + G +P
Sbjct: 230 SFRKYTGNTPVQFLTALRMTNAQVLLETTSYSINEIAGIVGYNNPLYFSRLFHKQKGCSP 289

Query: 280 SAVLKNT 286
           S      
Sbjct: 290 SEYRARN 296


>UniRef50_C0X7J7 AraC family transcriptional regulator n=22 Tax=Enterococcus
           faecalis RepID=C0X7J7_ENTFA
          Length = 276

 Score =  167 bits (424), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 104/273 (38%), Gaps = 12/273 (4%)

Query: 24  ENVISSGISLISLWHTYADEHYRVIWPRDKKKP------LIANSWVAVYTVQGCGKILLK 77
           +NV ++ +S++      + E +      +K +P         N WV  Y   G G     
Sbjct: 2   QNVFTNNVSILINDQPISQEFHLYEAGYEKCRPTKPTEFAPINYWVLHYCSDGEGYFSTP 61

Query: 78  NGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT----SMMDIPVGQQSVIYN 132
             E+  +    +  +     + Y+      W  +W+ F        +  I +  ++ I  
Sbjct: 62  FMEKQHITAGDLFMIPANCRNIYYPNRQNPWTYHWVGFVGDLSSQYLEKIGLTTENCILK 121

Query: 133 GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIAT 192
           G + +++L  + + I       N+      +  +  ++        ++  ++   ++   
Sbjct: 122 GTV-DKKLESLFKNIYQEAKKHNHFGSLSESFQLLNYLEHHSVTQHENQSQQLFNQIKMA 180

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
           +H +     S++ +A+      ++L +LF RY    P  Y  + +L  A SLL++   ++
Sbjct: 181 IHENFSNNLSISQLASEYNIDRSYLFKLFQRYEQTNPSIYVQNLKLQKACSLLRKSSLTI 240

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            E++    F    +FSK F  K    P    + 
Sbjct: 241 TEISFEAGFSSPSYFSKFFFQKKEMTPRQYRQQ 273


>UniRef50_C4Z413 AraC family transcriptional regulator, arabinose operon regulatory
           protein n=18 Tax=Clostridiales RepID=C4Z413_EUBE2
          Length = 276

 Score =  167 bits (423), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 97/245 (39%), Gaps = 15/245 (6%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKNGEQITL-HGNCIIFLKPMDIHSYHCEGL-VWEQY 110
             +P     +  +Y   GCG       +  T+     I+  +P ++  Y   G    E Y
Sbjct: 28  TYRPRGRVDFQIIYIAAGCGHFHFDTVDNETIVPAGNIVIFRPKELQKYEYYGEDKTEVY 87

Query: 111 WMEFTPTSMMDIP-----------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159
           W+ FT + + +I                + +    ++ + + E+     + E +   L  
Sbjct: 88  WIHFTGSDVKNILRKYGFPDNERIFPVGTSMEYERVFKRIIIELQRCQDNYEEMLTLLLR 147

Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
                II+Q         K +    +++  +   + +  +  ++ + A +   S +W  R
Sbjct: 148 H--LLIIFQRELTREHVLKNEYLNHEMDTAVTYFNENYNRDINIEEYATSKGMSVSWFIR 205

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            F ++TG TP ++ +  R++ A  LL+    S+ E++  + + +  +FS+ F    G +P
Sbjct: 206 NFKKFTGSTPMQFIVALRVNNAQVLLEATNYSINEISKIVGYDNQLYFSRLFHKLKGDSP 265

Query: 280 SAVLK 284
               K
Sbjct: 266 RDYRK 270


>UniRef50_C7Q5G1 Transcriptional regulator, AraC family n=1 Tax=Catenulispora
           acidiphila DSM 44928 RepID=C7Q5G1_CATAD
          Length = 292

 Score =  167 bits (423), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 54/287 (18%), Positives = 105/287 (36%), Gaps = 25/287 (8%)

Query: 19  PLLINENVISSGISLISLWHTYADEH------------YRVIWPRDKKKPLIANSWVAVY 66
           P    E      +S  +++ T A+EH            + +     +    + N +    
Sbjct: 9   PTAAGEEPWHPPVSEYAVYMTPAEEHRRLGLALYGAGWHTIAEHGIRWDARVLNCYALHL 68

Query: 67  TVQGCGKILLKNG--EQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM----- 119
             +G G I   +    ++ +      +L P  +HSY  +   W   W  F   +      
Sbjct: 69  VTRGSGWIEWGDRPRTRLPIKAPAAFWLFPGLVHSYQPDVGGWTITWALFDGPAAAGYES 128

Query: 120 MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179
           +D       V+  G+   + + E+   + +               ++++ I  +  +G  
Sbjct: 129 LDFLSRTSPVVPLGDA--RPVRELFRELLTVVRTSGPHYEVSAGILVHRLITAVRDNG-- 184

Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239
            P  R+  + +  L        ++ D A  +  +   LR      TG TPKEY L  RL 
Sbjct: 185 -PGLRE-SRAVRALTEHATDPVALQDHATRLGLTVTQLREEVRLATGSTPKEYILRVRLS 242

Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            A  LL     SV +VA  + + D  +F++ F  + G +P+   + +
Sbjct: 243 KAKDLLAATDQSVVQVARAVGYDDPAYFTRLFTQRVGLSPTMFRRGS 289


>UniRef50_UPI000174610C response regulator receiver domain protein (CheY-like) n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI000174610C
          Length = 280

 Score =  167 bits (423), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 15/266 (5%)

Query: 26  VISSGISLISLWHTYADEHYRVIW-PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84
           V+ SG       H  A       W P  + +   A S++      G G++LL +G    +
Sbjct: 24  VLESGDCRELAAHRIARLGLDEAWMPYRRVRLRPAGSFILA-CTAGKGRVLL-DGRWQRV 81

Query: 85  HGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEV 143
               +    P  ++++H EG  VW   W+ +   + +   VG  S +   E   +    +
Sbjct: 82  GAGMVCMAPPRVLNAFHAEGAEVWRFAWLRYDEPAFVSPMVGASSPVLAAEGAMEIARAI 141

Query: 144 AELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATL----HASLQQ 199
             L T  E  ++        K+++ WI L +   ++  Q  ++E  + TL      SL +
Sbjct: 142 DGLRTEWEGHRDP-------KLLHHWIELAHGLARRAAQPFEMEARLWTLWTSVQQSLAE 194

Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259
            W++  +A     S   LRR+  R  G++P ++    R+  A  LL+   + V  VA  +
Sbjct: 195 EWTLESLARAYHSSGEHLRRVCQRELGRSPMQHLTYMRMQRARQLLETTSDKVEVVAGEV 254

Query: 260 NFFDSFHFSKAFKHKFGYAPSAVLKN 285
            + D   FS+AFK   G APS   + 
Sbjct: 255 GYRDGLVFSRAFKRWVGCAPSEYRRR 280


>UniRef50_C4FY02 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271
           RepID=C4FY02_9FIRM
          Length = 282

 Score =  167 bits (422), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 97/258 (37%), Gaps = 16/258 (6%)

Query: 39  TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98
            + +   +   P    +  +   ++  +   G G + + N     L  N    L+     
Sbjct: 16  QFDECGIQQFEPYQVYQYTVYQPYIIHWIASGKGSLEVDN-HCYPLTANQGFILRRGQQV 74

Query: 99  SYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE------LTEVAELITSPE 151
            Y+ +G   W  YW+ F+   + +     Q    +   +  E      + ++     S  
Sbjct: 75  KYYADGKEPWRNYWIGFSGQRLEEFLQFTQLADAHCIQFQDEGQCQAIIQDICHFNLSQT 134

Query: 152 AIKNNLAVA------FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVAD 205
              N           FL     + + L     + +    ++        A+  +  +V  
Sbjct: 135 QDANTFYWQMMKIFDFLYHAHLELVSLSAPRQQSNSSPAEVAAAYIY--ANYARPITVES 192

Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265
           +A  I  S + L RLF ++  ++PK++ ++ RL  A  LL +  +S+  +A ++ + D  
Sbjct: 193 IAQYIGMSRSALFRLFRQHYRQSPKQFLMETRLRQARQLLVESQDSIKTIAASVGYSDQL 252

Query: 266 HFSKAFKHKFGYAPSAVL 283
            FSK FK  FG +PS   
Sbjct: 253 VFSKIFKKTFGLSPSDYR 270


>UniRef50_B0NXL6 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
           RepID=B0NXL6_9CLOT
          Length = 282

 Score =  166 bits (421), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 51/291 (17%), Positives = 109/291 (37%), Gaps = 24/291 (8%)

Query: 3   GKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW 62
           G L  S     +P        E  +     +++  H Y    YR     +          
Sbjct: 7   GVLPKSQYFFFSPS-------EQFLKYNYGVVNCGHFYCHFGYRREREGNAYP------- 52

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDI 122
           + +Y  +G   +   + +        I  +     H+Y+ +    E Y+  F   +  +I
Sbjct: 53  LFIYVAEGELHLE-HDSQHEVAKKGEIFLIDCSKPHAYYVDKEC-EFYYFHFAGRAAYEI 110

Query: 123 ---PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG-- 177
               +          I +  + +  +L  SP   +  ++   L+ + YQ +C++ A    
Sbjct: 111 TKDLILDNKGCLFHIINSDRIRKQMDLTISPLFYEQPISDVSLSCMAYQCLCMLQASNDV 170

Query: 178 ---KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
              ++  +   +   +  +   L  + ++ +++     S  +   LF   TG +P EY  
Sbjct: 171 FTTEESDENSMLSSTMTYIREHLGHKLTLEELSRQASLSPYYFAHLFKEETGISPIEYVA 230

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
             +++ A ++LK   NS+ E+AD L +     F  AFK + G +P+   + 
Sbjct: 231 MTKINYAKNILKTTENSITEIADLLGYSSDASFINAFKKRAGLSPARFRRK 281


>UniRef50_A5ZYS8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
           29174 RepID=A5ZYS8_9FIRM
          Length = 304

 Score =  166 bits (421), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 116/286 (40%), Gaps = 14/286 (4%)

Query: 21  LINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80
            I     ++  +  + ++      +    P   ++  + NS++ +YT++G G +L  +G 
Sbjct: 21  SIRFINTATPRARQTFFYVQEAGDFCTSSPYFTERENL-NSFLIIYTLRGKG-LLKYHGS 78

Query: 81  QITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEI 135
           Q +LH     ++  M+ H Y C +   WE  W+ F   S +    +       ++ + + 
Sbjct: 79  QYSLHPGTTAYINCMEHHHYECLQKQNWEFLWLHFNGPSALGYYEEFMRSNFHILDSLDP 138

Query: 136 YNQE--LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK-DPQRRQIEKLIAT 192
           +  E  +  +  +    +     L+   +  I+ + +     +          ++ ++  
Sbjct: 139 FFMESTMRRILSITQRKDIHSEILSSCLIINILTRILIENDTENLSLGFMPTYLKTVLKA 198

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
           +    Q+  S+  +A     S+  L R F +Y G  P EY +  RL+ + +LLK +  ++
Sbjct: 199 IDQHFQEPLSLESLAIAAGVSKYHLAREFKKYIGMPPNEYLIVTRLNHSKTLLKYEDLTI 258

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH----PTDAS 294
            E+A +  F    H+   FK   G  P    +    +    P+DA 
Sbjct: 259 EEIAYSCGFHQVSHYINLFKKHEGCTPLKFRREWHSNEAVKPSDAQ 304


>UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype
           B' RepID=UPI00016C01F8
          Length = 265

 Score =  166 bits (421), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 8/229 (3%)

Query: 64  AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSM-MD 121
               ++G G +     E        I+F+    ++SY       +++YW  F    +  D
Sbjct: 34  LYLILEGEGSVTCNKTEYYP-EVGDIMFVPKGSLNSYATNKDKPYKKYWCHFDADILSTD 92

Query: 122 IPVGQQSVIY----NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177
           I V     +     N +I  +   ++ +   S   I    A A L +II+ +        
Sbjct: 93  IAVYLSFPLLVKNANKKISYKLFAKLVKYHESKNPIDAIYAKALLLRIIHFYFSECEFVK 152

Query: 178 KKD-PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDA 236
             D P +  + KL+  +  +L+++ ++ ++A     +  +L  LF    G+TP EY  + 
Sbjct: 153 INDVPNQTVMGKLVKYIDENLERKITLTELAKFAHLNANYLCTLFSSTFGQTPIEYITNK 212

Query: 237 RLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           +++ A  LL+   +++ E+++TL F   F+FS  FK + GY+PS   ++
Sbjct: 213 KIEKAKILLRTTTDTIEEISNTLGFSSPFYFSAVFKKRIGYSPSQFRQS 261


>UniRef50_C7T9S5 Putative transcriptional regulator n=2 Tax=Lactobacillus
           RepID=C7T9S5_LACRG
          Length = 284

 Score =  166 bits (420), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 53/270 (19%), Positives = 103/270 (38%), Gaps = 9/270 (3%)

Query: 23  NENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82
            EN       ++    +  +  Y  + PR   +    + ++  + +QG G   + N E  
Sbjct: 3   KENKWLRTDRIVCPELSVFEVGYEDVHPRAPYQYEQLDYYLLHFVLQGEGLFFINN-EIH 61

Query: 83  TLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYN 137
            L       + P   ++Y+   G  W   W+            D  +G+ + IY  +  +
Sbjct: 62  QLSRGQGFLIPPHTDNNYYPLVGNPWSYRWIGVRGPGAAAVFNDAGLGKTNFIYQHQDIH 121

Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD--PQRRQIEKLIATLHA 195
           Q     AE            A+    +I+   +     + +    P ++   + +  L  
Sbjct: 122 QMDDLFAEAYDYFSRDHLYGALGKFYEIVSALVDDYQQETRLGVLPNQQYALEAVEILKR 181

Query: 196 SLQQR-WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254
                   + D+A  +     +L R+F+R  G +PK Y +  R++ A+ LL+   +++G+
Sbjct: 182 EYADSTLRIDDVAERVKVERTYLYRIFMRNLGVSPKSYLMQLRINQAIELLRNTNDAIGD 241

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           +A  + F     FSKAF       PSA  K
Sbjct: 242 IAIKVGFTSYSQFSKAFVKARRMTPSAFRK 271


>UniRef50_C1DME1 Transcriptional regulator AraC family n=1 Tax=Azotobacter
           vinelandii DJ RepID=C1DME1_AZOVD
          Length = 310

 Score =  165 bits (419), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 26/243 (10%)

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121
           +  +T+ G G +  +        G+ ++ L P D H Y  E G  WE +W+       + 
Sbjct: 60  IVQHTLAGEGDLRFEGRHHRLRAGDTMLVLVPHD-HCYWLETGGSWEFFWIAMYGKEALR 118

Query: 122 I----PVGQQSVIYNGEIYNQELTE-VAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
           +       +  V+   +   + L E VA LI SPE      +      ++     L+  D
Sbjct: 119 LQRALLDERGPVLRLSDKTIECLAENVAALIRSPELTAGRASALAYESLMALHDDLLVQD 178

Query: 177 GKKDPQRRQIEKLIATLHASLQ----------------QRWSVADMAATIPCSEAWLRRL 220
              D  R  +   IA++   +                     VA +A     S +   RL
Sbjct: 179 VALDAARTGV---IASIQNHIHACLRCEPDTLSPQAEDDELDVASLAQLAGLSRSHFSRL 235

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           F R  G +P +Y L+ R+  A  LL+    SV  +A ++   D  +FSK F+H F  +PS
Sbjct: 236 FARTVGMSPAQYVLNERMKRAAHLLEATDLSVKAIALSVGIHDPNYFSKLFRHAFSLSPS 295

Query: 281 AVL 283
              
Sbjct: 296 EFR 298


>UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-like protein n=2
           Tax=Opitutaceae bacterium TAV2 RepID=C0A4H9_9BACT
          Length = 307

 Score =  165 bits (419), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 113/303 (37%), Gaps = 31/303 (10%)

Query: 10  VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69
           V   TP  +P ++             +   +A+ ++       +  P + N +  V    
Sbjct: 6   VNLNTPARLPGILTVQQPEGPYYGRVI---HAESNHYTPPQSRRSPPFVHNHYHIVLVTA 62

Query: 70  GCGKILLKNGEQITLHGNCIIFLKPMDIHSY---------HCE----------GLVWEQY 110
           G G   ++ G+  +     + F  P   H +         + E          G   +  
Sbjct: 63  GRGFFEIE-GKNWSATPGEVFFTSPRQSHQFLNSGRDTTRYAEVTFEFVHPGSGSPIKML 121

Query: 111 WMEFTP--TSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164
            ++F    ++  ++P    + ++       +   ++  +     +     +    A L +
Sbjct: 122 GLDFAGLLSAWTNLPCEPVLSRRLPKALARVLAGKIEALVNRGRASPQPDDLELGALLAE 181

Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           I+      ++      P   +I+++   +    ++   +  +A     S + L R F   
Sbjct: 182 ILTVVFRNVFRKEAAAPD--KIDQVRDIIRTRYREELHLTTLAKDAGLSPSHLSRRFKAR 239

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            G++P  Y L+ RL  A  LL+ +G S+ E+A  + F D F+FS+ F+ + G AP +  K
Sbjct: 240 FGRSPISYQLELRLQSACELLRTRGESLAEIAAAVGFEDVFYFSRLFRRRLGEAPGSFRK 299

Query: 285 NTD 287
            + 
Sbjct: 300 ASQ 302


>UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia
           intestinalis L1-82 RepID=C7GHF4_9FIRM
          Length = 291

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 104/270 (38%), Gaps = 31/270 (11%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-- 102
           ++    +D+ +    +     + + G GK  + +     +    II L P   H   C  
Sbjct: 21  WKGTRLKDEARYHSHDFIEMAFILSGHGKYKIAD-RLYDVSEGDIIILNPGQKHQALCTD 79

Query: 103 EGLVWEQYWMEFTPTSMMDIP---------------VGQQSVIYNGEIYNQELTEVAELI 147
                 ++++        D P                 Q  +++      Q+L ++   +
Sbjct: 80  PSNPATEFFVGLCDVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAM 139

Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADG------------KKDPQRRQIEKLIATLHA 195
           +    +  +     L   + Q + L+  +             +   ++  +++++     
Sbjct: 140 SVENDVCRSGRYIMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFED 199

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ-GNSVGE 254
              ++ S+  +A  +  S  ++ R+F   TG TP  + ++ RL+ A  LL+     S+ E
Sbjct: 200 HYSEKISLDQIAENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQE 259

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           VA  + + D +HFSK FK +FG  PS + +
Sbjct: 260 VAAKVGYDDVYHFSKLFKKRFGMPPSKIRR 289


>UniRef50_C6CWX0 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CWX0_PAESJ
          Length = 275

 Score =  165 bits (417), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 97/255 (38%), Gaps = 11/255 (4%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
            H+      D+++      +  + +  G G + + + E+ T+       L P   H Y+ 
Sbjct: 24  GHWNNQETIDRQQG--FPHYQWLQSTGGEGVLWIGD-EKYTVKPGQGFCLFPGVPHRYYA 80

Query: 103 EGLVWEQYWMEFTPTSMMDIPVGQQS------VIYNGEIYNQELTEVAELITSPEAIKNN 156
               W+ Y++ F  +   D+             + + E+    L  ++ +  S       
Sbjct: 81  VRDPWDVYFISFGGSLAKDLLNQAGIKEPGLYSVTDSEMIVAHLRGISAMAESGLPFLGL 140

Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRR-QIEKLIATLHASLQQRWSVADMAATIPCSEA 215
                L   +   + ++    +   Q   ++  +I  +   +    ++ D+++ I  +  
Sbjct: 141 ECSKLLYLFLLDLMKVVQVSTQSAEQYYMRLNPVIRYIEEHIDSVMTIQDLSSRIGVTPQ 200

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
           +L RLF +  G  P EY    R++ +  L+   + + + E+A  + F  + +FS  FK  
Sbjct: 201 YLCRLFKQLMGMRPMEYVNRERINRSKELMFLGREHKMQEIAAKVGFDSASYFSTVFKRM 260

Query: 275 FGYAPSAVLKNTDQH 289
            G +P    K    H
Sbjct: 261 EGMSPEQFKKMHGFH 275


>UniRef50_C2EN40 AraC family transcriptional regulator n=2 Tax=Lactobacillus
           RepID=C2EN40_9LACO
          Length = 276

 Score =  165 bits (417), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 100/269 (37%), Gaps = 11/269 (4%)

Query: 27  ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86
                   +     +   +    P+    P+  + ++      G G     +G+   L  
Sbjct: 6   WGFNNQSYNAQFYISSGGFEKPHPKHSYGPMGRSGYMIHCVTSGHGIFKS-DGKVYHLKK 64

Query: 87  NCIIFLKPMDIHSYHCE-GLVWEQYWMEFT----PTSMMDIPVGQQSVIYNGEIYNQELT 141
             I +++P        +    W  YW+ F     P  M  I +  ++ I + +       
Sbjct: 65  GDIFYIQPHKTTYMEADENDPWTFYWVRFIGNLVPKYMKRINLSYKNPIMSQQDLPTVFQ 124

Query: 142 EVAELI-----TSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHAS 196
           +V +++     + P+       +  +   +                    ++ +  +  +
Sbjct: 125 DVIDIVEYSQNSGPQDFYYQSKMFAILNALELHFPKENPHKNVTTTSDIYDRALRYIANN 184

Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256
            +++ SV D+   +    ++L R+F +++   P+E+  + RL+ A  +LK + N+V  VA
Sbjct: 185 YEEQISVHDLVRYLNIDRSYLFRIFKKHSQTNPQEFITNYRLNKASEMLKSKENTVEYVA 244

Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            +  F     F + FK K+G +PS   K 
Sbjct: 245 LSCGFLSYQSFFRFFKKKYGISPSDYKKK 273


>UniRef50_C6D3L8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D3L8_PAESJ
          Length = 274

 Score =  164 bits (416), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 99/243 (40%), Gaps = 15/243 (6%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYW 111
           + ++P     ++    ++G G++++ NG+   +    + FL P   HSY      W+  W
Sbjct: 31  ETERPEGFPDYLMQQVLEGFGEVVV-NGKAYKVEAGDVFFLYPDIPHSYKPLNQKWKVSW 89

Query: 112 MEFTPTSMMDIPV------GQQSVIYNGEIYN---QELTEVAELITSPEAIKNNLAVAFL 162
           + F       + +           +   E+     Q LT   +     +  ++ L    L
Sbjct: 90  VSFNGREADQMLLFAGISESGTGRLKTNELIKPLEQMLTLAMDNDQEADLERSKLLYGLL 149

Query: 163 TKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFL 222
             + YQ +   Y+D + D    +++ ++  +  +LQ+  ++ ++A     +  +L R+F 
Sbjct: 150 IDLKYQLLSPSYSDQEFD----RVKPVLHYIENNLQRPLTLIELAGVATVTPQYLCRMFQ 205

Query: 223 RYTGKTPKEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           +     P EY    R+  +  L+ +     + E+A  + F  S +F   F+   G  P A
Sbjct: 206 QTMNIRPMEYINQQRIKRSKQLMFQHPAMRMYEIAGRVGFESSSYFGVVFRKLNGMNPEA 265

Query: 282 VLK 284
             K
Sbjct: 266 FKK 268


>UniRef50_C4DTW1 Transcriptional regulator containing an amidase domain and an
           AraC-type DNA-binding HTH domain n=1 Tax=Stackebrandtia
           nassauensis DSM 44728 RepID=C4DTW1_9ACTO
          Length = 431

 Score =  164 bits (415), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 7/229 (3%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTS 118
               +  +   G G++ L +       G C +F       + H        + M FT T 
Sbjct: 7   LTDHLLWHVHDGAGELRLDDRHVRLRPGFCAVFAPGDAPVATHDPRHPLLVFGMHFTATG 66

Query: 119 MMDIPVGQQSVIYNGEIYNQELT-EVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177
                V +Q       +++QE    +A          ++L        + Q++CL++ + 
Sbjct: 67  FDGDLVPEQRW---CRLWDQEFAVRLARHCDYAHRRGDDLGQRQAVLGLEQFLCLLWDNV 123

Query: 178 KKD---PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
            +    P    +E +   +     + W+VA +A     S A   R F  +TG +P  Y +
Sbjct: 124 TRPAPGPGDAAVEDIARAVRQEPSRDWTVATLAKRANLSRAQFTRRFTAHTGYSPARYVI 183

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            ARLD A  LL +   SVG+VA TL + D  +FS+ +K   G +PS   
Sbjct: 184 RARLDRARQLLTETNMSVGQVAATLGYPDVGYFSRQYKVHTGSSPSRDR 232


>UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D7E7_PAESJ
          Length = 281

 Score =  163 bits (414), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 106/260 (40%), Gaps = 13/260 (5%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101
           + +Y    P+ ++   I +        +G G + +   +   +    ++ +    + SY 
Sbjct: 23  EAYYTQCSPQWRELDYIPSYNKFYLICEGEGWLNIDGQDYRPV-PGQLVHMPAHVLQSYS 81

Query: 102 C-EGLVWEQYWMEFTPTS-------MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI 153
                 + +YW  FT T         ++IP        + +   +   E+ EL  +   +
Sbjct: 82  AVSDRPYSKYWCHFTATMGEMDLFQWLEIPPILDISPDHTDSLTKLFRELVELYQNRSYL 141

Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQR----RQIEKLIATLHASLQQRWSVADMAAT 209
                 A L +II  ++       K  P R     +++++ A + A+L +  ++  +A  
Sbjct: 142 ARIREKAILLEIIALFLSHSDTHLKFVPGRLGEIERLKQIEAFIEANLSEALTLEQLAKH 201

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
           +     +L R F ++    P +Y    R+  A SLL     ++ E+A+ + F D+ HF+K
Sbjct: 202 VHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAKSLLGTTDLAIKEIAELVGFPDTNHFAK 261

Query: 270 AFKHKFGYAPSAVLKNTDQH 289
           AF+ +   +P+       ++
Sbjct: 262 AFRKEASCSPTEYRHRAGRN 281


>UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivorax
           RepID=Q0VT12_ALCBS
          Length = 305

 Score =  163 bits (413), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 108/285 (37%), Gaps = 18/285 (6%)

Query: 15  PYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKI 74
           P ++   + ++ + SG     +        +R+    ++++P      + +Y V G G++
Sbjct: 29  PPSVLSSVRDHPLCSGCMPHGVGFYPQASGHRM----ERQRPA---DNLLIYCVSGAGEL 81

Query: 75  LLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSV 129
               G+   +    ++ L     H YH      W  YW+            +I       
Sbjct: 82  AY-GGQSQPVEAGDLLLLPAGFSHRYHANPQQPWSIYWVHLGGHEVQRYFDEIAGQPDGG 140

Query: 130 IYNGEI-YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC---LMYADGKKDPQRRQ 185
           I    +  +  L E  + + +         + +   ++   +    LM    +       
Sbjct: 141 IRRVRVGVHSRLAEDFQALMAAATNAQPEHLVYAANLLRSLLAYASLMRRQHQVRHATLD 200

Query: 186 IEKLIATLHASLQQRWSVADM-AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           + ++ + L  ++ +R S+ D+  AT   S     R + R TG+TP + +   ++  A  L
Sbjct: 201 VTRVNSYLQTAIDRRLSLDDLITATSDLSRYHFIREYKRQTGQTPMQAFQRIKVSHACYL 260

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
           L    +SV  +A  L   D ++FS+ FK   G +P    K   ++
Sbjct: 261 LDISDDSVATIALQLGHDDPYYFSRLFKKMMGISPQKYRKERGKN 305


>UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales
           RepID=C6LDG4_9FIRM
          Length = 369

 Score =  163 bits (413), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 101/265 (38%), Gaps = 29/265 (10%)

Query: 45  YRVIWPRDKKKPLIANSWV----AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS- 99
           Y    P D   P +A  W      ++  +G G+I      Q       I  + P  +H+ 
Sbjct: 107 YPCTIPGDF--PSVALHWHKSMEIIFVKKGTGRIQTGRNMQ-EARSGDIFVMPPGTLHAI 163

Query: 100 YHCEGLVWEQ----YWMEFTPTSMMDI----------------PVGQQSVIYNGEIYNQE 139
           Y   G   E     + +EF      D+                P     V    +  +  
Sbjct: 164 YAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASGQLLQPAVFSPVDAGYKQISAC 223

Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD-PQRRQIEKLIATLHASLQ 198
           L    EL ++ E        A L +++   + +     ++D P   ++++++  +     
Sbjct: 224 LRRAEELCSARERGYELGVKAALLELLLYLLRMCPEAPERDTPDMERLKRVLQRIEQDYA 283

Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADT 258
           +  +V DMAA   CS +   R F R TG +P  Y  + RL  A   L++  + +  +A+ 
Sbjct: 284 KPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLAAAAENLRETDDKILVIAEN 343

Query: 259 LNFFDSFHFSKAFKHKFGYAPSAVL 283
             F +  +F++ FK ++G  P A  
Sbjct: 344 AGFENLSNFNRQFKKRYGVTPRAYR 368


>UniRef50_C8Q370 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8Q370_9ENTR
          Length = 293

 Score =  163 bits (413), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 95/250 (38%), Gaps = 15/250 (6%)

Query: 54  KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV--WEQYW 111
            +P     ++   T++G G I    GE   +  + ++   P  +H Y        W+  W
Sbjct: 44  HRPEGMKGYMLNLTLKGEGVIRHAEGEFHCV-ADEMLLFPPGVLHHYGRAKESPAWDHLW 102

Query: 112 MEFTPTSMM-----------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160
           + F P               +I         + +    +  +V     + E +   LA+ 
Sbjct: 103 IYFIPRPYWIDWLHWDRTEGNIGRMPLGSSADSQQIANQFKDVIRWNAASEPLAEALAMN 162

Query: 161 FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
            L +II +      A   ++ +  +I+ +   L+  L +   + D+A     S + L  +
Sbjct: 163 TLERIILELFQRQPASNHRN-RDPRIQTVCHYLNEHLAEDVRIDDLARMTYLSSSRLTHI 221

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           F +  G T   +    R+  A  LL+Q   S+ ++A  + + D  +FS+ F      +P 
Sbjct: 222 FRKEMGNTIFGWRESQRISRACDLLQQTQLSITQIARAVGYEDPLYFSRIFSQHRHLSPR 281

Query: 281 AVLKNTDQHP 290
              K  D+ P
Sbjct: 282 EYRKKFDRIP 291


>UniRef50_C6IZ62 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786
           str. D14 RepID=C6IZ62_9BACL
          Length = 293

 Score =  163 bits (412), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 96/261 (36%), Gaps = 19/261 (7%)

Query: 35  SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLK- 93
           + + +  D  Y          PL+    +  YT+ G G   L       +        + 
Sbjct: 26  AGYDSITDPSYYWDGLERTDGPLL----LFQYTLSGEGVFELGE-RSHRVTAGQAFLAEI 80

Query: 94  PMDIHSYHCE--GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEI----YNQELTEVAELI 147
           P     Y+ +     WE  ++ F P  +  +P+ ++ +   G +     +     +A +I
Sbjct: 81  PSSHRYYYPQEASAPWEFLFLLFRPNVV--LPLWRKFLSEAGAVPYLPEDSAPVRLARMI 138

Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMY-----ADGKKDPQRRQIEKLIATLHASLQQRWS 202
            +             +  +YQ++  +      +   K+     +++    + ++  Q  S
Sbjct: 139 ITDAGAGRITDPYIASSCVYQFVTELARMQVTSQKNKENWPESVKRAAELMESNYAQMIS 198

Query: 203 VADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFF 262
           +  ++  +  S+  L R F   TG TP  Y    R + A+ LL+    S+  +A+ + + 
Sbjct: 199 IDQLSEHVGLSKYHLIRRFSDSTGLTPGAYLTRVRTEKAMDLLRGTSLSIETIAERVGYS 258

Query: 263 DSFHFSKAFKHKFGYAPSAVL 283
              +F KAF+   G  P    
Sbjct: 259 SGSYFIKAFRRLTGLTPGEFR 279


>UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
           1_7_47FAA RepID=C5ET70_9FIRM
          Length = 273

 Score =  163 bits (412), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 8/245 (3%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWMEFTPT 117
              +   Y   G  +  + +     L+    I   P    HSY   G+ +++  + FT  
Sbjct: 25  HEYFELYYLESGK-RYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKRLVLYFTKE 83

Query: 118 SMMDIPV----GQQSVIYNGEIYNQELTEVAELITSPEAIKN--NLAVAFLTKIIYQWIC 171
            +    V     Q + +Y  +  N+    +  L+   E   N    A+ F+   I   + 
Sbjct: 84  MIAVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSEEALYFILNQILILLL 143

Query: 172 LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
               +  K  ++ +I  +I  LH +     ++ ++A     S  +L R F +YT  T  +
Sbjct: 144 RNSTETAKPEKQSRITSIIHYLHENYTYPITLNELAEQFYLSPYYLCREFKKYTNSTIVQ 203

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPT 291
           Y    R+  A  L  +   SV E++  + F +  HF++ ++   G +PS   K   +   
Sbjct: 204 YINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKSRKQAKERSA 263

Query: 292 DASPH 296
               H
Sbjct: 264 AMERH 268


>UniRef50_C0Z4P0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0Z4P0_BREBN
          Length = 515

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 97/234 (41%), Gaps = 4/234 (1%)

Query: 60  NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM 119
           N+ V  Y  +G  ++ +   +Q+   G  ++      I    C+      Y + +     
Sbjct: 20  NTHVLCYVAEGRAEMTVDGQKQVLDAGKLLLLHPTTKIEELRCQSGPLHIYRLHYAEARR 79

Query: 120 M--DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177
              +    ++ V             V E ++     ++  +      ++Y+ + ++Y + 
Sbjct: 80  DQHESAPERKEVEALAVSTPASFLTVLEELSQLTRKRDYSSFLRSQALLYELLGVVYDEQ 139

Query: 178 KKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
           KK  ++    IE+ IA +    ++   +  + +    + +   R F R TG TP EY   
Sbjct: 140 KKKEEKGIGTIEETIAYMQKHYRESLELGSLPSLAGLTPSSYCRAFKRVTGMTPGEYLTG 199

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
            R++ A  LL   G SV +VA  + + D  +FS+ FK + G +P   +K +DQ 
Sbjct: 200 LRMEHAKELLAHSGGSVKDVARNVGYTDELYFSRLFKKREGLSPQIYMKQSDQR 253


>UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
           RepID=A7VRD3_9CLOT
          Length = 277

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 99/235 (42%), Gaps = 11/235 (4%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPT 117
            +    +Y   G G+ +L+ G++  L    ++ + P  +H    +        ++     
Sbjct: 40  HDFCEILYVAGGAGEAILE-GKKFRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAIRDF 98

Query: 118 SMMDIPVG-----QQSVIYNGEIYNQE---LTEVAELITSPEAIKNNLAVAFLTKIIYQW 169
           ++  +P G     +  V+  GE   +    L E+ +  +S       ++   ++ ++   
Sbjct: 99  AVPGLPAGCLSQEKYRVLSCGEYRYKMDIYLRELLQETSSQIEFYQEISQGLVSALLVLV 158

Query: 170 ICLMYADGKKDPQRRQ-IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
           + L+  + + +    Q  +K+   L  +     ++  ++ T+  S+ +L  LF   TG +
Sbjct: 159 MRLIRINPEDEAALSQECQKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFKEQTGVS 218

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           P +Y    R++ A  LL +    V EV+  + + +  +FS+ FK  +G +P    
Sbjct: 219 PIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273


>UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium
           RepID=A3DHI5_CLOTH
          Length = 302

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/297 (19%), Positives = 115/297 (38%), Gaps = 31/297 (10%)

Query: 17  NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76
           NI     E+ +SS   +  +  T    H    W     +P     +  VY  +G     +
Sbjct: 7   NILPKAWESFLSSSTFIPVIVKTIERFH-DTSWH---MEPNKHECFEMVYIKRGKAVFEI 62

Query: 77  KNGEQITLHGNCIIFLKPMDIHSY------HCEGLVWEQYWM-EFTP-------TSMMDI 122
             G    +  N II +KP   H +       CE +V    ++  F          + +D 
Sbjct: 63  A-GYPAEIGPNDIIIIKPNQPHKFIVKSESGCEFIVLSFKFVNRFDGQYSDVSLENFLDF 121

Query: 123 PVGQQSVIYNGEIYNQE------LTEVAELITSPE---AIKNNLAVAFLTKIIYQWICLM 173
             G+++  +     +Q+      L  + +   +P+      N L V  L  +I + + + 
Sbjct: 122 VSGKETGPFITLKVSQKNDIIVLLNRILKERENPDIGSEFLNYLLVMELFVLISRALKME 181

Query: 174 YADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
           + +  K+     +  I+  +  ++ + ++  S+ D+A  +  S ++  R F    G +P 
Sbjct: 182 WENSIKNKSPKIKELIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPI 241

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
            Y L  R++ A  LLK   N + ++A ++ F +   F+  FK      P    KN  
Sbjct: 242 NYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298


>UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibrionaceae
           RepID=A6B487_VIBPA
          Length = 279

 Score =  161 bits (408), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 98/246 (39%), Gaps = 15/246 (6%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWM 112
           +P     ++   T QG G I   N +   +    ++   P   H YH   +   W   W+
Sbjct: 36  RPNGMKGFIINITSQGEGTIFHGN-DAFDVKTGDLLLFPPSATHFYHRKKDNASWFHRWV 94

Query: 113 EFTPTSMMDIPV----GQQSVIYNGEIYNQELTEVAELITSPEAI-------KNNLAVAF 161
            F P +  +  +     +  V     + N  ++++  L    E I       +++LA+  
Sbjct: 95  YFRPRAFWNDWLCWHEQRNGVYLTQGLDNSTISQIERLFIDIEYISKSDMPYRDDLAINL 154

Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
           L +++ +    +  D    P   ++ + +  +  +L Q +++ D+A     S + L  LF
Sbjct: 155 LEQLLIR-CKTIQPDVVSKPLDPRVIEAMNYMTQNLNQNFTLEDIADFTCLSASRLGHLF 213

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
               G T  ++  D R+  A  LL     SV  +   + + D  +FS+ FK K G +P  
Sbjct: 214 RDEVGMTITQWRDDQRISRAKQLLVTTNYSVNHIGRIVGYTDPLYFSRVFKRKAGASPKL 273

Query: 282 VLKNTD 287
             +   
Sbjct: 274 YREQIS 279


>UniRef50_UPI0001788D3A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788D3A
          Length = 291

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 94/273 (34%), Gaps = 14/273 (5%)

Query: 32  SLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIF 91
           + + LW   +  H       +K  P     +   +   G  +    +G  ++L    +  
Sbjct: 23  TQLGLWIFKSGSHPFFT---EKVGPRSVEFYSIHFVASGKVRFGW-DGSSVSLSEGDLFC 78

Query: 92  LKPMDIHSY--HCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNG-------EIYNQELTE 142
           L P  +++Y   C+       W  F    M  I                  +     + +
Sbjct: 79  LFPGSVYTYVKDCDEPSTMITWTAFMGELMPSILNHVDLCPERPYRRNAFRDDALAVIKD 138

Query: 143 VAELITSPEAIKNNLAVAFLTKIIYQWICLM-YADGKKDPQRRQIEKLIATLHASLQQRW 201
           +  L+  P+   +   ++   ++I+                   +E +   +     +  
Sbjct: 139 IQRLLRQPQQDHSLQLMSLGFQLIHSIDPNRDQHLPAASAASDWLESVPGYMGLHCTENL 198

Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261
           SV ++AA      +   R F R  G +P  Y     ++ A  LL  +G S+ + A +L +
Sbjct: 199 SVEELAAWAGVHRSHFTRAFTRRYGISPSRYMQQLIMEKATRLLSAEGTSITQTALSLGY 258

Query: 262 FDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294
            D F FS+AF   FG  PSA +K        + 
Sbjct: 259 SDLFTFSRAFTRYFGMTPSAFVKANRPSSRTSE 291


>UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia
           RepID=A4XJ70_CALS8
          Length = 286

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 95/250 (38%), Gaps = 22/250 (8%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFT 115
           P   + +  VY  +G     + +G++  L     +F+    IH    E    E Y + F+
Sbjct: 36  PHWHDEFEIVYLEKGTASFRV-DGKEYFLGPKQFLFVNCGSIHGGKAEDNP-EPYAIVFS 93

Query: 116 PTSMMDIP-----------VGQQSVI----YNGEIYNQELTEVAELITSPEAIKNNLAVA 160
            + +               V ++ ++    +  E   + ++ +  +          L   
Sbjct: 94  LSMLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHTRELISNIITVWKEKPKGYELLVKG 153

Query: 161 FLTKIIYQWICLMY-----ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
           +L  I Y      Y      D + D +  +I+  +  ++++      +  +A     S+ 
Sbjct: 154 YLFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDIDIDLLAKLANLSKF 213

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           +  RLF   T  TP +Y    R++ A+ L+K    S+ E+A  + F +  +F K FK   
Sbjct: 214 YFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYV 273

Query: 276 GYAPSAVLKN 285
           G  P    KN
Sbjct: 274 GVTPFKYKKN 283


>UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D3K3_PAESJ
          Length = 296

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 99/256 (38%), Gaps = 14/256 (5%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLK-PMDIHSY 100
           D+HYR         PL+    +  YT  G G    +  E + +        + P D   Y
Sbjct: 37  DQHYRWDGLTRNDGPLL----LFQYTFDGEGIYE-RGTETLRIQAGQAFMTEIPGDHRYY 91

Query: 101 -HCEGLVWEQYWMEFTPTSMMDI------PVGQQSVIYNGEIYNQELTEVAELITSPEAI 153
              +G  W   ++   P+ ++         +G    +  G    + L  + E   +    
Sbjct: 92  FPPDGSHWSFIFVLIRPSLILPNWEEVKKQLGDTPFLPAGSRPIRLLQSMYEEAHAGRVK 151

Query: 154 KNNLAVAFLTKIIYQWICLMYADGK-KDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
           +   A +++ + I +      A  +       ++++ ++ + A  +   S+  +A  +  
Sbjct: 152 EPYTASSYVYQFISELCRFALAPQEDAKEWPLKVKEAVSYIDAHYENMISLDQLADQLSL 211

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           S+  L RLF R  G +P +Y    R+  A+ LLK+   SV  +A+ + +    +F K F+
Sbjct: 212 SKYHLLRLFTRTVGMSPNDYLNQVRIKEAIRLLKESDWSVERIAEQVGYSGGSYFIKWFR 271

Query: 273 HKFGYAPSAVLKNTDQ 288
              G  P +      Q
Sbjct: 272 KITGETPGSFRHGEGQ 287


>UniRef50_C7MF03 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Brachybacterium faecium DSM 4810 RepID=C7MF03_BRAFD
          Length = 311

 Score =  161 bits (407), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 89/236 (37%), Gaps = 8/236 (3%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTP 116
            + +    V    G G      G    +     I+L+P   HSY  +   W ++W+ F  
Sbjct: 72  RVLSRHALVLVSSGAGTFTDPAGTH-PVTAPAWIWLEPGTPHSYGPDAHGWTEHWVLFEG 130

Query: 117 TSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL 172
                      VG   V+  G     E  E+   +    ++    A    + ++++ +  
Sbjct: 131 VGARTYRSHSGVGDGHVLRRGGPEPAERAEIFAALHRAGSVPGRRAQLHASSLVHRLLGA 190

Query: 173 MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232
           +  D ++DPQR  +   +    A+  +  SVA  AA         R    R TG TP E+
Sbjct: 191 LLGDAEEDPQRTSVTHTVL---ATATEDLSVAQRAALSGVGVDEFRAQIRRATGLTPHEF 247

Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
            L  R   A  LL +    + +VA  +   D+ +F++ F  + G AP        +
Sbjct: 248 VLTTRFSRAQELLARSDLPIWQVAAEVGIDDASYFTRLFTRRIGVAPRTFRHEQRR 303


>UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria
           RepID=A8SGH8_9FIRM
          Length = 288

 Score =  161 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 87/244 (35%), Gaps = 12/244 (4%)

Query: 64  AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFTPTSMMDI 122
             Y + G G+  L  G+   +  + ++ + P   H+         E   +       +  
Sbjct: 44  LFYCLSGEGQFYLA-GQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVASMEFLFS 102

Query: 123 PVGQQSVIYNGEIYNQE--------LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY 174
                  I+N     +         L E    +   E +  +L    L  ++      + 
Sbjct: 103 KADTNYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVRCTTISLQ 162

Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
            +     + R+  ++   L  + ++  S+  +A     ++ +L   F R  G +P  Y  
Sbjct: 163 LEEAAPTENRECAEIKRYLDTNYREDISLDLLAELAHLNKYYLAHTFQREYGISPITYLN 222

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ--HPTD 292
             R++ +  +L   G S+ ++++ + F    +FS+ F+   G  P+   + T Q   P  
Sbjct: 223 RRRIEESKHMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGMTPNEYRRQTRQGKRPAP 282

Query: 293 ASPH 296
              H
Sbjct: 283 TKRH 286


>UniRef50_C5BNS5 Response regulator receiver domain protein n=1 Tax=Teredinibacter
           turnerae T7901 RepID=C5BNS5_TERTT
          Length = 290

 Score =  160 bits (406), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 101/276 (36%), Gaps = 15/276 (5%)

Query: 17  NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76
            +P L + NV  +GIS +           R  +   +KKP   +    ++T++G G++  
Sbjct: 24  RVPTLKSLNVAIAGISQL-----------RGDYCVARKKP---DYHTILFTLEGEGELHT 69

Query: 77  KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIY 136
             G  + +  N +  L              W   W     T+         + +      
Sbjct: 70  HKGRTL-IPANTLTLLPARQPFLITLSREHWATTWFCLEDTAHWSHLRQPDASVRYSSEA 128

Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHAS 196
                 +  L    +       ++ L+  ++  +             R++E+L   +   
Sbjct: 129 AALYYLLGHLYYENDPDMQTTPLSHLSHYLHNALGNNRQREHLSEPERRLEQLFGDIQQQ 188

Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256
           L   W++  MA  +  S +   RL  ++  ++P +  +  R++ A  LL     S+ ++A
Sbjct: 189 LHVNWTIERMAERVHYSPSHFHRLCQQHVNRSPIQQLIHLRMERAKQLLSDTHWSLNQIA 248

Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292
             + + D F+FS  FK   G +PS    +     ++
Sbjct: 249 SAVGYSDVFNFSNRFKKSTGVSPSQFRTSPGHRSSE 284


>UniRef50_A5Z7W7 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
           ATCC 27560 RepID=A5Z7W7_9FIRM
          Length = 334

 Score =  160 bits (405), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 16/239 (6%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPT 117
              +  +Y   G       + +Q ++    I+  KP ++  Y        + YW+ FT  
Sbjct: 81  RQDYQLLYVKHGT-IYYYIDKKQYSISAGGILIYKPSELLHYEFFLKDAPDIYWVHFTGD 139

Query: 118 SMMDIPVGQQSVIYNG----------EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167
           ++ +I         +            I+++ ++E+         I + L +  L  I  
Sbjct: 140 NVDNILGELNLSTKHAFMGTICPEYDTIFDKIISELLNRKLHFMDISSILMLELLYTISR 199

Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
               + Y   K D     +EK++   + +   + S+  +A  +  S +WL + F ++ G 
Sbjct: 200 DICTITYISSKND---LILEKVLEIFNTNYPNKISITSIAKELNYSSSWLSKTFTKHFGL 256

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           +PK Y  + R++ A S+L     S+ +VA+   F D  +FS+ F +  G  PS   +  
Sbjct: 257 SPKAYLTNLRIEKAKSMLLST-MSIRQVAEQTGFPDQMYFSRVFTNAEGITPSQYRQKH 314


>UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM
           20583 RepID=C9LCE8_RUMHA
          Length = 287

 Score =  160 bits (405), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 100/252 (39%), Gaps = 25/252 (9%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWMEFTP 116
            +       + G GK  + +G+   +     I L P   H           ++ ++ F+ 
Sbjct: 35  HDFIEFAVIMGGKGKFYI-DGKDYEVEEGDFILLNPGTYHRSKAGYSKEGLKECYIAFSG 93

Query: 117 TSMM-------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169
            S             G   +I   +   + + ++  ++       +      L   + Q 
Sbjct: 94  VSFKGCKSGYFPSFKGNGKIIKMADRMKKNIFQICTVMNKEARECSAGRYFMLKAYLIQI 153

Query: 170 ICLMYADG--------------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
           +CL+  +               +   ++  +++++  +  + +++ S+  +AA +  S  
Sbjct: 154 LCLVVREQKEEKQEGEGKGYIFQSTGKKYVVQQIMKYMEENYREKISLEQIAANMYLSSF 213

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLK-QQGNSVGEVADTLNFFDSFHFSKAFKHK 274
           ++ ++F   TG TP  Y +  R++ A  +L+      + EVA  + + D++HFSK FK  
Sbjct: 214 YIAKIFKSETGDTPINYLIRLRMEKAKEILEISPEEPIKEVAAAVGYSDAYHFSKLFKKH 273

Query: 275 FGYAPSAVLKNT 286
           +G +P    K++
Sbjct: 274 YGISPLYYKKDS 285


>UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
           29149 RepID=A7B0D2_RUMGN
          Length = 270

 Score =  160 bits (404), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 98/236 (41%), Gaps = 12/236 (5%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWMEFTPT 117
            + +   Y ++G  ++ +  GE   L  N  +   P    HSY  + + +++  + F+P 
Sbjct: 33  HDFFELYYLLEGE-RMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPFKRIVLYFSPD 91

Query: 118 SMMD----IPVGQQSVIYNGEIY--NQELTEVAELITS---PEAIKNNLAVAFLTKIIYQ 168
            + +      + ++ +++  E Y  NQ L+ +  L      P    +      L  ++  
Sbjct: 92  LIANDTICQLLSEKELLFVNEGYIPNQILSLLLSLTHEIDVPGKYHDAYICNQLNGLLLN 151

Query: 169 WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
            + L +   K  P+ R   K +  +H    +  SV  +A  +  S   L   F   TGKT
Sbjct: 152 MLRLDFEAVKSIPKTRS-AKAVDYIHNHYMEDISVNQLAEILYVSPYHLCHEFKNATGKT 210

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
             +Y    R+  A  L+ +   ++ +++  + F +  HF++ FK   G AP    K
Sbjct: 211 IIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFKKITGVAPREKKK 266


>UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CXJ2_PAESJ
          Length = 289

 Score =  160 bits (404), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 17/268 (6%)

Query: 37  WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFL--KP 94
           W +  +  Y        ++P      +  YT+ G G I  +  + I L       +    
Sbjct: 24  WQSIQNPDYSFT---GDERPD-FGHVIFQYTLNGLGYIEYEQ-QCIPLPRGTGFLVKVPS 78

Query: 95  MDIHSYHCEGLVWEQYWMEFTP---TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPE 151
              + Y  E   WE  W+  +    + + D+ + Q+  I   +  +  +    +L+ S  
Sbjct: 79  KHRYFYKSEDEPWEVLWLNLSGDEASRIWDLVIAQEGPIIRRDPNSPIIHAFRKLLRSIA 138

Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQR------RQIEKLIATLHASLQQRWSVAD 205
             K       L+  +Y+W+  +    ++  +         I++    +     Q  ++  
Sbjct: 139 EEKITDKYQ-LSAKVYEWMIALVQTSREVSREISTSSSSLIQRAKDFMKQHYAQPLTLDQ 197

Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265
           +A     ++  L RLF +    +P  Y  D R++ A++LL+     V  + +   F +S 
Sbjct: 198 LAEHCGVNKYHLCRLFQKSDQTSPLAYLRDRRMEAAVALLRTTELPVQTIGEMCGFENSS 257

Query: 266 HFSKAFKHKFGYAPSAVLKNTDQHPTDA 293
           +F K F+      P        + P DA
Sbjct: 258 YFGKVFREYMSMTPKEYRMKKIEFPYDA 285


>UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae
           RepID=C7H5Z6_9FIRM
          Length = 319

 Score =  160 bits (404), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 90/244 (36%), Gaps = 12/244 (4%)

Query: 64  AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFTPTSMMDI 122
             Y + G G+ LL +G+   +  + ++ + P   H+         E   +  +   ++  
Sbjct: 75  LFYCLSGEGQFLL-SGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVSGIEILFG 133

Query: 123 PVGQQSVIYNGEIYNQE--------LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY 174
                  I+N     +         L E    +   E +  +L    L  ++      + 
Sbjct: 134 KADSTYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVRCTTLSLQ 193

Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
            +       R+  ++   L  + ++  S+  +A     ++ +L   F +  G +P  Y  
Sbjct: 194 VEESPRSDNRECVEIKRYLDNNYREEISLDTLAEVAHINKYYLAHTFQKAYGISPITYLN 253

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD--QHPTD 292
             R++ +  +L   G S+ ++++ + F    +FS+ F+   G  P+   +     Q P  
Sbjct: 254 RRRIEESKYMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGLTPNEYRRQVRQGQRPAP 313

Query: 293 ASPH 296
           A  H
Sbjct: 314 AKRH 317


>UniRef50_D1N759 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N759_9BACT
          Length = 261

 Score =  159 bits (403), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 13/258 (5%)

Query: 32  SLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVY-TVQGCGKILLKNGEQITLHGNCII 90
           ++ +     +  HY V  P+    P +    + +Y  V GCG+          L+ N + 
Sbjct: 11  TIHAPVRVRSTGHYTV--PKGWSDPPLVKPILELYWCVSGCGRFGSGAS-GWLLNENQVC 67

Query: 91  FLKPMDIHSYHCEGLVWEQYWMEFTPTS---MMDIPVGQQSVIYNGEIYNQELTEVAELI 147
           F  P D H    E   ++ +W+     +   ++D    ++          +   ++A  I
Sbjct: 68  FYFPGDRHEITAESASFDYWWLTIDGPNVPFLIDSFRLERPSRPVAPCPEELFLKLAREI 127

Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQR-WSVADM 206
                     A A   +I+ + +           +   I +    +         SV  +
Sbjct: 128 RDLGRDGEYRAGATAYEILTRAML-----PPSGEESGLILRFKQLVEERYDDPALSVRSL 182

Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266
           +A +    + L RL  R+ G  P+EY    RL +A+ +L +   SV E+A+   F D  +
Sbjct: 183 SAALGVHRSTLTRLVTRHCGMPPQEYLTGFRLQIAMQMLHESAVSVKEIAEATGFSDQNY 242

Query: 267 FSKAFKHKFGYAPSAVLK 284
           F K F  + G  P+ + +
Sbjct: 243 FGKVFLKRLGKTPTQMRR 260


>UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein,
           arabinose-binding/dimerisation n=3 Tax=Enterococcus
           faecium RepID=Q3XWE2_ENTFC
          Length = 288

 Score =  159 bits (403), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 101/244 (41%), Gaps = 12/244 (4%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQY 110
              K    +S++      G G +   NG++  L    ++F+  +  +++   E  +W   
Sbjct: 44  HTSKRSGLSSYLCFLVESGSGTLEY-NGQKYMLQAGGMVFIDCLKPYAHESSEDDLWTLR 102

Query: 111 WMEFTPTSMMDIP-----VGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAVAFLT 163
           W  F    M ++       G Q V  +   ++Y + + E+  +    + +++    A L+
Sbjct: 103 WCHFNGIGMTEVYKKYLERGGQPVFRSAKFDLYAKLMMELHRIAEGQDYVRDMKINAALS 162

Query: 164 KIIYQWICLMYADGK---KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
           +++   +   +   K      +R +++ +   L      + ++  ++A    ++ +L ++
Sbjct: 163 QLLILLMEDAWNPDKIPNMSTKRMELQNIKQYLDDHYTDKITMDQLSAEFFINKQYLHKI 222

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           F    G T   Y    R+  A  LL+    S+ E+A+ +   D+ +FS+ F    G  PS
Sbjct: 223 FRETYGITIVNYLNQKRITQAKHLLRFTNLSMEEIAEKIGMTDANYFSRTFFKVEGVRPS 282

Query: 281 AVLK 284
              K
Sbjct: 283 EFRK 286


>UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii
           KSM-K16 RepID=Q5WL10_BACSK
          Length = 298

 Score =  159 bits (402), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%)

Query: 35  SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94
             ++     +Y   W + + K     +   ++ + G  K+    G    L    IIFL  
Sbjct: 11  EPYYPVVKFYYYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEG-SYQLKKGQIIFLDA 69

Query: 95  MDIHSYHCEGLVWEQYWMEFT----PTSMMDIP---------------VGQQSVIYNGEI 135
              H           + +EF+     T+                       Q ++++ + 
Sbjct: 70  GTRHRLIV-SERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLLHDTDD 128

Query: 136 YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHA 195
             Q L  +   +       + +    L++ + +   L  A   +  Q+  +++ +A +H 
Sbjct: 129 TYQCLRRLILEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKRALAYIHQ 188

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
           +  +  SVAD+A ++     +L+R+F  +TGK+  E+ +  R++ A ++LKQ   S+ ++
Sbjct: 189 NYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDISITDI 248

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
              +      +FS  FK      PS   K   
Sbjct: 249 PHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280


>UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8RR78_9CLOT
          Length = 281

 Score =  158 bits (401), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 89/250 (35%), Gaps = 21/250 (8%)

Query: 54  KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS--YHC--EGLVWEQ 109
           K+P   + +   Y + G  K+ + N +   L    +  + P+++H   Y    E   +  
Sbjct: 33  KRPHYHSYYEIYYLLSGKCKMFI-NQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGI 91

Query: 110 YW--------MEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161
           Y+        +             Q       E +  ++ E+   +   E   ++     
Sbjct: 92  YFSRDTVTSFLSLCGREAFGHIFSQPKRTIPSE-FRPKIEELLAQMQDEEKQGDSYCQIQ 150

Query: 162 LTKIIYQWICLMYADGKKDPQRRQIE-------KLIATLHASLQQRWSVADMAATIPCSE 214
           L  +++Q + ++    +   +   +E       +    ++   Q+  ++  +AA    S 
Sbjct: 151 LCSLLHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSP 210

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
            +  + F   TG   KEY    R+  A  +L+    SV  VA    F D  +F   F+  
Sbjct: 211 TYFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRL 270

Query: 275 FGYAPSAVLK 284
            G +P    K
Sbjct: 271 TGVSPREYRK 280


>UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum
           alkenivorans AK-01 RepID=B8FM47_DESAA
          Length = 277

 Score =  158 bits (401), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 98/242 (40%), Gaps = 14/242 (5%)

Query: 58  IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPT 117
           + + +     ++G  +++ + G  + +    +  + P + H+   E      + +   P 
Sbjct: 36  VHDGFSIGIVLEGK-RVIDQKGASVVIGPKDVFLINPGEPHACKSEDGKHTYFTICVEPE 94

Query: 118 SMMDIPV-----GQQSVIYN-----GEIYNQELTEVAELITSPEAI--KNNLAVAFLTKI 165
           ++           Q++  ++      E  N  + E   L+    +   K    ++ L+  
Sbjct: 95  ALKSFASQISEKAQETPYFSCLAAKDEELNSLIREFMTLVQKSGSTMEKEASLISILSTA 154

Query: 166 IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225
           I ++        +  P  + + +    +     +  ++ ++A     S  + +RLFL   
Sbjct: 155 ILRYGDNPPEIRRISPHVQAVNRAREYIKTHYAENLTLKELAGVACLSPFYFQRLFLENV 214

Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           G +P ++ +  R+  A  +L Q G+S+ + A  + F D  HF++AFK   G +P   ++N
Sbjct: 215 GISPHDFLIQYRIKKAREMLDQ-GSSLADAALDVGFTDQSHFTRAFKRVTGISPGRYIRN 273

Query: 286 TD 287
             
Sbjct: 274 LQ 275


>UniRef50_C6D174 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D174_PAESJ
          Length = 281

 Score =  158 bits (401), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 89/265 (33%), Gaps = 11/265 (4%)

Query: 31  ISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCII 90
              I  +  + +  + V       +  +   +     + G G +   N     L      
Sbjct: 19  PDFIGGYSEFPE--HAVNREFATTENNLDRYYNLHIVLGGKGYLHTDN-MTYELTQGQGF 75

Query: 91  FLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQ---QSVIYNGEIY---NQELTEV 143
              P    +YH +    W   W+ F      +   G+   +  +++          +  +
Sbjct: 76  LYGPGLRQTYHSDARDPWSIRWVHFYGARPEEFLDGKGLDEPWLFHLPDLAPVEALMERL 135

Query: 144 AELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWS 202
            EL  S E      A + L +++ +             Q   +I      + A+  Q ++
Sbjct: 136 LELGRSYEVDDEYAAASTLYELLTRIQTTASQLNVSVHQTADKIRAAANYVRANCNQPFT 195

Query: 203 VADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFF 262
           +   AA    S  +  R F +  GK+  ++  +AR+  A  LL     SV  +A    F 
Sbjct: 196 LEQAAAIAGYSSHYFSRKFNQTFGKSFSDFLTEARILRAKQLLASTRLSVKLIALETGFS 255

Query: 263 DSFHFSKAFKHKFGYAPSAVLKNTD 287
            + +FSK F+ + G  P    +   
Sbjct: 256 QTSYFSKCFRDQEGMTPLQFRERHQ 280


>UniRef50_D2Q7T6 AraC-type transcriptional regulator n=2 Tax=Bifidobacterium dentium
           RepID=D2Q7T6_9BIFI
          Length = 292

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 90/293 (30%), Gaps = 17/293 (5%)

Query: 10  VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69
           +++   Y +P         +     +   ++A        P     P + +  +    + 
Sbjct: 1   MEHAQVYTLPSFCPFTSGHTDPPSSANGVSFAFCGISRTEPGHDVGPALRDHTIIHLVLS 60

Query: 70  GCGKILLKNGEQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFTPTSMMDIPVGQQS 128
           G G++  + G    L  +    ++P    +Y  C    W   W+            G   
Sbjct: 61  GSGELHSQ-GAVFRLKAHDGFIIRPDSPVTYQACATDPWTYLWLGLGGNGAQRCLAGIGL 119

Query: 129 VIYNGEIYNQELTEVAELITSP----------EAIKNNLAVAFLTKIIYQWICLMYADGK 178
                  +  + +    LI S           E   N + + FL ++         A  +
Sbjct: 120 AHDRNAFHVGDTSAFLALIQSCFDYTSGSFADEIKLNAITLEFLHRLALAMATAGGATTQ 179

Query: 179 KDPQRRQIEKLI-----ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233
             P        +       +     +  +V  +A  +    + L R F   TG T K+Y 
Sbjct: 180 SRPDDAGAGGALATAAAQYVAEHYAESINVGRVAEALHTDRSHLSRRFKSATGLTLKDYI 239

Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            + R+  A  LL      V +VA    F     FS+ FK     +P+     T
Sbjct: 240 DNIRIAKACDLLSMTDMEVAQVARACGFSSLEVFSRKFKMARSVSPARFRSGT 292


>UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
           ATCC 43243 RepID=B7AP83_9BACE
          Length = 278

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 103/250 (41%), Gaps = 22/250 (8%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH--SYHCEGLVWEQ---YWME 113
            + +  VY   G   IL+ +     +    ++ + P +IH  SY     V +Q       
Sbjct: 28  HDCYELVYLFSGECNILVSH-TIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQRTALRFS 86

Query: 114 FTPTSMMDIPVGQQSV--------IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI 165
              T  +   +G+  V        I   +   + +  +   +     + + L++  +  +
Sbjct: 87  IKDTDWLCSALGKDFVKDNLTAGIIEVPDKRKEYIENLITRMIYENQMPDELSMGMVKTL 146

Query: 166 IYQWI-----CLMYAD---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
             +++     C +Y D    + D Q   I+ +   ++ +  ++  + D+A     S ++L
Sbjct: 147 FQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATYVYNNYDKQIYLDDVAKQFSISRSYL 206

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
            + F + TG   KEY L+ R+  A  LL +  +S+ ++A    F DS +F  AF+   G 
Sbjct: 207 SKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGFNDSNYFGDAFRRIKGI 266

Query: 278 APSAVLKNTD 287
           +P+    N D
Sbjct: 267 SPNKYRHNRD 276


>UniRef50_P07642 Arabinose operon regulatory protein n=160 Tax=Proteobacteria
           RepID=ARAC_ERWCH
          Length = 310

 Score =  158 bits (400), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 90/246 (36%), Gaps = 13/246 (5%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH--CEGLVWEQYWM 112
           +P     ++   T++G G+I     E    +   ++   P   H Y        W   W+
Sbjct: 43  RPDGMKGYIINLTMKGQGQI-FDGDETFFCNPGDLLLFPPKSTHFYGRSPSSDCWYHRWV 101

Query: 113 EFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN---LAVAFLTKI 165
            F P       ++       +       NQ L E   L  + E  + +    +      +
Sbjct: 102 YFRPRAYWADWLEWHTKSSGIGRMSLPNNQLLLEFDRLFANIEQTQRSGRRFSEELGMNL 161

Query: 166 IYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFL 222
           + + +     +  + PQ     ++ +    + ++L     + ++A  +  S + L  LF 
Sbjct: 162 LERLLLRAMEEDPQSPQKIMDPRVIEACQFITSNLAGELRIDEVARHVCLSPSRLAHLFR 221

Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282
              G     +  D R+  A  LL+    S+  +   + + D  +FS+ F+ + G +PS  
Sbjct: 222 EQVGINILRWREDQRVIRAKLLLQTTQESIANIGRVVGYDDQLYFSRVFRKRVGVSPSDF 281

Query: 283 LKNTDQ 288
            + + +
Sbjct: 282 RRRSSE 287


>UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales
           RepID=C9LA22_RUMHA
          Length = 277

 Score =  158 bits (400), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 92/259 (35%), Gaps = 26/259 (10%)

Query: 37  WHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD 96
           WH+    HY                    +  +G G   ++ G+QI +  N +I + P  
Sbjct: 32  WHSMEHSHYFS---------------ELFFVTKGTGYFQIE-GKQIPVQKNDLILINPNI 75

Query: 97  IHS-YHCEGLVWEQYWMEFTPTSM------MDIPVGQQSVIYNGEIYNQELTEVAELITS 149
            H+ +  +   WE   +                     S+          L+ + + I +
Sbjct: 76  PHTEFGNKEQPWEYIALGIEGVQFQYSEKEAPYSYSVFSLSREHREIPWYLSTLVKEIQT 135

Query: 150 PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEK---LIATLHASLQQRWSVADM 206
            +     +    L  I+         +    P+++   +   +   ++    +  ++  +
Sbjct: 136 QQEGYQTICQNLLELILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTL 195

Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266
           +A +  ++ +L   F  Y G +P  Y +  R++ A  LL+    SV ++ +   F    +
Sbjct: 196 SALVHINKYYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSY 255

Query: 267 FSKAFKHKFGYAPSAVLKN 285
           FS+ F+   G  P+A  K 
Sbjct: 256 FSQTFRRLTGTTPNAYRKK 274


>UniRef50_Q6PU53 BgaR n=2 Tax=Bacillus megaterium RepID=Q6PU53_BACME
          Length = 275

 Score =  158 bits (399), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 89/233 (38%), Gaps = 10/233 (4%)

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120
            +  +  ++G G++ + N E   +  N  +FL     H Y+     W+  W+ F  + M 
Sbjct: 40  DYQWIQCIKGRGELHV-NDEVYIIKENEGMFLTRHVPHEYYPVTSEWQVCWVSFNGSVMD 98

Query: 121 DIPVGQQS------VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI--CL 172
           DI +  Q       V+ N E   + L E+   +              L  +I +     +
Sbjct: 99  DIMLSLQFINSGKIVLTNAESLYRMLQELMNRLEENHTFSTMQCSELLYSVILKLRQDSV 158

Query: 173 MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232
                 +  Q  Q+  ++  +     Q  ++  +A  +  +E +   LF +  G  P EY
Sbjct: 159 YIESKSRLQQITQLNPVLRYIEEYYHQPLTLEVLAQQLSVTEQYTCLLFQQSLGIRPFEY 218

Query: 233 YLDARLDLALS-LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
               R+  A   LLK    SV +VA  + +    +F K FK +    P+   K
Sbjct: 219 VTRVRIQKAKKLLLKNNQISVQDVARQVGYEHPSYFIKRFKEQENVTPTIFRK 271


>UniRef50_D1NAQ6 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1NAQ6_9BACT
          Length = 246

 Score =  158 bits (399), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 89/233 (38%), Gaps = 3/233 (1%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTP 116
            +      +Y     G  ++ NGE++ L       L P       CE  V  Q ++ F  
Sbjct: 17  RLTGHHWRLYVHDAPGAGVVVNGEKLELSPGFAWLLPPHGDLPAWCENPVLNQLYLHFEV 76

Query: 117 TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
             +        S +    +      E+ E + S        A A     + +     + +
Sbjct: 77  ARLTGSRRTPASAVPLDPVLTVLARELKEQLDSQAPALILTATALAAAALARLPGDAWDE 136

Query: 177 GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDA 236
              D   R+IE+L  +L  +L Q  +V D+A  +        R F   TG TP +Y  + 
Sbjct: 137 LGPD---REIEELCESLRHTLAQELTVTDLARRLGMPVNAFIRRFQAGTGSTPYQYLTNL 193

Query: 237 RLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
           R   A  LL++   S+ ++ + +   D FHFS+ FK   G +P+A  +     
Sbjct: 194 RYTRAARLLEEGELSIDDICEAVGVKDRFHFSRMFKRLHGLSPAAYRRGYRPR 246


>UniRef50_A4BF96 Arabinose operon regulatory protein n=1 Tax=Reinekea blandensis
           MED297 RepID=A4BF96_9GAMM
          Length = 287

 Score =  158 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 95/249 (38%), Gaps = 17/249 (6%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWM 112
           +P     ++   TV G G +     ++ T+    ++ L    +H Y  H +   W   W+
Sbjct: 40  RPNGLKGYIINMTVSGAGLVFPGTDQERTVAKGDMMILPASAVHDYGRHPDYHNWYHRWI 99

Query: 113 EFTPTSMMD--------------IPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158
            F P +                 + + +Q       + +     V E  +  ++I +   
Sbjct: 100 YFRPRATWHDWLDWTDKHMNVGFLSLSKQPSDVEANVIDGLFQNV-EQNSKRQSILSEEL 158

Query: 159 VAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218
              L + I      +      +P   +I +    +H ++    ++ ++A     S++   
Sbjct: 159 SLNLLEQILIRCRELDHSKPMEPIDARILRACQFIHDNIASELTIDELAQVACMSQSRFS 218

Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278
            LF +    + +++  D R+ LA  LL     ++ +VA  L + D+ +FS+ FK   G +
Sbjct: 219 HLFKQQKNVSVRQWIEDQRIALARQLLITTDLAINQVAQYLGYQDALYFSRVFKKNLGES 278

Query: 279 PSAVLKNTD 287
           P    ++  
Sbjct: 279 PREFRQSQR 287


>UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile
           DSM 15176 RepID=D1PIK0_9FIRM
          Length = 615

 Score =  157 bits (398), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 95/242 (39%), Gaps = 18/242 (7%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWMEFTPT 117
              +   Y  QG  + ++++  Q  L  +  I   P    HS+    + + +  + F P 
Sbjct: 33  HEFFEIYYLEQGRRQHIIEDS-QYILQPDEFIIFPPFVMHHSFEENDVPFRRLLLYFNPE 91

Query: 118 SM----------MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167
            +              V +     +  IYN  + ++ +     +     L    +  +  
Sbjct: 92  VIRSPQILRTLSERARVYKLPRAQSAPIYN-LMKDILQEQERDDLYSRELITLMVNALAL 150

Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
           Q +     +  +  QR ++  +I  LH    +  ++  +A     S+  L R F RYT  
Sbjct: 151 QLVR-NSDEAARPEQRNRVTDIINYLHEHFTEDITLEQLANHFYVSQYHLCREFKRYTSS 209

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS----AVL 283
           T  +Y  + R+  A  LL++   S+ E++  + F +  HF++ +K   G +PS    A L
Sbjct: 210 TIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMSPSQNKQAYL 269

Query: 284 KN 285
           K 
Sbjct: 270 KR 271


>UniRef50_C6CRB9 Transcriptional regulator, AraC family n=3 Tax=Bacillales
           RepID=C6CRB9_PAESJ
          Length = 279

 Score =  157 bits (396), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 95/254 (37%), Gaps = 13/254 (5%)

Query: 43  EHYRVIW-PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSY 100
            +YR        ++    N++   Y V G G   + +G    L     I   P+     Y
Sbjct: 23  GNYRFDPEHSTTREAGALNNFNIHYCVSGKGYAEI-DGVVHELRAGEAILYFPLQKQRYY 81

Query: 101 HCEGLVWEQYWMEF-TPTSMMDIPVGQQSV------IYNGEIYNQELTEVAELITSPEAI 153
             +   W+  W  F   T + D  + Q         +   +I+ Q   E+     +   +
Sbjct: 82  SSQDEPWDVRWFHFYGGTGLRDYLIEQGFHKSPLWKLRQPQIWEQAHEELLREAETHRIL 141

Query: 154 KNNLAVAFLTKIIYQWICLMYA--DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211
           +          ++  ++    A    K      +I +L+  +     + + + + A  + 
Sbjct: 142 RPAQLSMLTYMLLTVFVEHASALQGNKTGTSSERIMELLPLMQQEAVKPFILEEWAERVG 201

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALS-LLKQQGNSVGEVADTLNFFDSFHFSKA 270
            S  +  +LF   T  TP ++    RL  A   LL+++ +++G++A+   +    +F+K 
Sbjct: 202 VSPYYFCKLFRNATRMTPMDFITRCRLQAAKQWLLERKDDNIGQIAEEAGYPSVSYFNKR 261

Query: 271 FKHKFGYAPSAVLK 284
           F    G  P+A  +
Sbjct: 262 FMEHEGMTPTAYRR 275


>UniRef50_D1N3X5 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N3X5_9BACT
          Length = 286

 Score =  157 bits (396), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 10/251 (3%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
               +W   K+       W   YT+ G G++     E     G+ ++ + P +   Y  E
Sbjct: 38  SRSYVWDGLKRGQAELVIWQ--YTLSGMGRLRFGENEYPIPPGSAVLLVVPENHCYYLPE 95

Query: 104 GLV-WEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEA--IKNN 156
               W   ++    + ++    D       ++ +G   +  +    EL+       + N 
Sbjct: 96  DSPYWRFLFVSVYGSELVRLVTDFRRSHGFLLQHGTD-SPVVASAWELLKKCREKKLDNR 154

Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216
              +         +    A      Q   ++++ A   A+L +  SV D+A    CS   
Sbjct: 155 YRASAAAYDFVMSLFSEPAGRGTHAQDDFLKRVHAYALANLSRPLSVGDLADAAGCSRWH 214

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
             R F +  GK+P E+  D ++ LA+ LL+    SV EVA+   F D+ +F K F++ +G
Sbjct: 215 FSRRFQQLEGKSPHEFVTDLKMRLAVRLLQTTNGSVKEVAENCGFEDASYFCKVFRNHYG 274

Query: 277 YAPSAVLKNTD 287
            +P+      +
Sbjct: 275 VSPAGFRSGAE 285


>UniRef50_D1WXI3 Transcriptional regulator, AraC family n=5 Tax=Streptomyces
           RepID=D1WXI3_9ACTO
          Length = 292

 Score =  157 bits (396), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 88/240 (36%), Gaps = 8/240 (3%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWME 113
            P   +  VAV    G G     +G +  + G  +I+L P   H Y  + G  W++ +++
Sbjct: 36  GPRTLDHHVAVIVNSGTGWFKGPDGRRTPVTGPSLIWLTPGTPHHYGADPGTGWDESFVD 95

Query: 114 FTPTSMMDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169
           FT  +         +     +            V  ++ +       L V     +    
Sbjct: 96  FTGPATTTYTELGYIEPDRPLVPLSDTAAPRAAVGRIVRAARRGNPLLEVETGAAVHELL 155

Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229
           + L  A     P    + + +A       Q  +VA+ AA    + A LR    R  G +P
Sbjct: 156 VSLRRARADIGPDGDPVLQALA---RDAYQPLTVAEHAARHGMTPAELRTAVRRGAGCSP 212

Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
           K+Y L  RL  A  LL      V  VA  + + D  +FS+ F  + G AP    +   + 
Sbjct: 213 KDYLLGIRLGRAKELLAATDLPVAAVARRVGYDDPAYFSRLFARRVGTAPVRFREQQGRS 272


>UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           cellulovorans 743B RepID=C5RQC9_CLOCL
          Length = 275

 Score =  156 bits (395), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 91/233 (39%), Gaps = 10/233 (4%)

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120
            +  +   +G G + + N + IT++ N  + L P   H Y+     W   W+     ++ 
Sbjct: 40  HFQWIQCRKGSGMLKINN-QTITINENQAMLLFPHTSHEYYSSSEEWIVDWVALNGYAVE 98

Query: 121 DIP------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY 174
           +I         +   +   E++   + ++ EL  S   IK+  +   +  I+   +    
Sbjct: 99  EILKNGGIQHSEVFSVSEPELFILRMEKLLELAASYNTIKSLESSKIIYSILMDILAYTS 158

Query: 175 ADGKKD--PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232
            D       Q  ++  ++  +  +  +  ++ D++     +  +L  +F + TG    EY
Sbjct: 159 TDKVDYMINQYSKLRPVLDYIDDNYDKIITLQDLSEVANVTPEYLCTVFKKTTGIRVFEY 218

Query: 233 YLDARLDLALSL-LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
             + R+  +  + L ++   + E+A    F D  +F   FK      P+   K
Sbjct: 219 INNIRIKNSKEMILSKKNMPIKEIAKNSGFEDVSYFCSMFKKIEKLTPNEFRK 271


>UniRef50_A3YE82 Transcriptional Regulator, AraC family protein n=2
           Tax=Gammaproteobacteria RepID=A3YE82_9GAMM
          Length = 277

 Score =  156 bits (395), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 18/236 (7%)

Query: 71  CGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM---------- 120
            G++ +K   Q+ L  N +  + P   H+    G   + +WM F P+ +           
Sbjct: 35  KGRLSMKYQNQVELSENMLTLIPPGVAHTLVA-GEDLDIWWMGFCPSCLTLDFDASLLQT 93

Query: 121 --DIPVGQQSVIYNGE----IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI-CLM 173
              I +G   V    +      N+   E+ +L  S E     +  + +T I+++      
Sbjct: 94  FRQIRLGALPVFKVSQDRALFINRMFEELDQLHASNETDIEVIQKSIITLILHEVNKASQ 153

Query: 174 YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233
             +   +    ++ K +  +        S+ D+A  I CS + L  L  ++TG T  ++ 
Sbjct: 154 PFEIGANQADIKVSKALDFIQQHYLTPISLKDVANAIHCSPSHLAYLVKQHTGYTVGQWI 213

Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
           L++RL  A S L      +  + + L + D  HF + FK  +G  P+A  K    H
Sbjct: 214 LNSRLTQACSRLIHSDQDINHLVEELGWHDVTHFIRQFKKAYGITPAAWRKQQKNH 269


>UniRef50_C5C2R6 Transcriptional regulator, AraC family n=1 Tax=Beutenbergia
           cavernae DSM 12333 RepID=C5C2R6_BEUC1
          Length = 275

 Score =  156 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 80/232 (34%), Gaps = 9/232 (3%)

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMD 121
              V    G G+        + +      +L P   H+Y      W ++W+ F   +   
Sbjct: 42  HALVVVTSGRGRYR-DVERDVDVVAPAWFWLFPGRWHAYGPGPDGWSEHWVLFDGVAARG 100

Query: 122 IPVGQ--QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179
                     ++ G +  +EL    E + +  A            ++++ +    +    
Sbjct: 101 YAAHTAWDPPVHAGGLPAEELAACFEGLRAATAGAGLRDQLVAASLVHRLVGATVSARAA 160

Query: 180 --DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
             +P    ++ +I        +  SVA  AA    S   LR      TG TP E  L  R
Sbjct: 161 AGEPTTSAVQAVIDA----AAEPLSVAQRAARAGVSPDRLRAEVRAETGLTPHELVLRTR 216

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
           L  A  LL      VG VA  + + D  +FS+ F  + G  PS   +   + 
Sbjct: 217 LATAQQLLAGSDLDVGAVAARVGYDDPAYFSRLFARRVGAPPSEFRRQQHRS 268


>UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061
           RepID=B4AG99_BACPU
          Length = 302

 Score =  156 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 89/222 (40%), Gaps = 5/222 (2%)

Query: 64  AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY---WMEFTPTSMM 120
            + +++G  ++ + NG+   L    ++ + P    +         +Y   +         
Sbjct: 80  FLLSIRGEARLNI-NGKSYDLQPGSVMHVTPGCQLALQVISQSEYEYHSLFYHLNCDKES 138

Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180
           D     +          + LT + + + +P  +          +I+YQ + +     +  
Sbjct: 139 DCDTAFKLETGANPRIIELLTMLHQNVHAPGGMGKLRVKELFLRILYQML-MGCKQKESS 197

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
           P  R IE+ +A +        ++ D+A     +       F +YTG  P +Y +  R++ 
Sbjct: 198 PNERIIEEAVAYIRGQYMNPLTLQDLAELCDMNPKSFSYFFHKYTGLHPIDYVIQYRMER 257

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282
           A  +LK     + +V+ T+ + +  +FS+ FK KFG  PSA 
Sbjct: 258 AREILKAGNIPIRDVSMTVGYPNPLYFSRLFKKKFGVPPSAY 299


>UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacillaceae
           RepID=B1HZP2_LYSSC
          Length = 276

 Score =  156 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 5/216 (2%)

Query: 74  ILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFT--PTSMMDIPVGQQSVI 130
           I   NG    +    I+   P      +     VWE   + +          P+ +Q  +
Sbjct: 52  IFSLNGTPYVMEPGVIVHAGPQMPIEVNVTSQKVWEYAVVHYNLPMEETALYPLVEQHFL 111

Query: 131 YNGEIYNQELTEVAELITSPEAIKNN--LAVAFLTKIIYQWICLMYADGKKDPQRRQIEK 188
                  Q +T+V +L+ S     N        L   + + I +       D     +E+
Sbjct: 112 IKTGHNTQIITQVQQLVESYSFPGNMAVFKSKTLFMNLLEHILIAAKVKVLDNANELMEQ 171

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
            +  +H    ++ SV+++++           LF ++TG  P +Y  + R+  A  LL+  
Sbjct: 172 ALQYIHEHYAEQISVSNISSEFDIERRRFAYLFEQHTGMNPSKYITEYRIRRAKDLLEYG 231

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           G  V E+A+ + + D F+FS+ FK   G +PSA  K
Sbjct: 232 GIPVAEIAECVGYVDCFYFSRVFKKCTGLSPSAYRK 267


>UniRef50_C6IZN2 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786
           str. D14 RepID=C6IZN2_9BACL
          Length = 277

 Score =  156 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 95/241 (39%), Gaps = 13/241 (5%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWME 113
           +P     +  ++T +G G++ L +G  + L     + L P   H Y  +    WE Y++ 
Sbjct: 37  RPDGYPYYHWLHTAEGEGELTLGSGT-VLLPPGSGMLLPPGMPHEYQAKRSSTWETYYLT 95

Query: 114 FTPTSMMDIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI 170
           F   +   I      +++V++  E        +  L+   ++I++   +   T+ +Y+++
Sbjct: 96  FGGAAAGSILAAFGIREAVLFRWEAEAPISPLLGHLLNRLDSIQDPFGLETSTE-VYRFL 154

Query: 171 CLMYADGKKDPQR-----RQIEKLIATLHASLQQR-WSVADMAATIPCSEAWLRRLFLRY 224
            ++   G+           ++  L+A +          +  +A     S   L +LF + 
Sbjct: 155 AVLSQFGQVSGSAVPRIMEKLGPLLAWMEREYGNPDVGLDTLAEVAGMSGRHLSKLFQQS 214

Query: 225 TGKTPKEYYLDARLDLALSLLK-QQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            G  P  Y    R+  A   L  + G +V  +A    F D+ HF   F+   G  P    
Sbjct: 215 FGIAPYSYLTQMRIHKAKEHLASEPGVTVAAIAGKTGFRDASHFVATFRKHTGMTPQQFR 274

Query: 284 K 284
           +
Sbjct: 275 R 275


>UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8RL67_9CLOT
          Length = 272

 Score =  155 bits (393), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 94/241 (39%), Gaps = 12/241 (4%)

Query: 54  KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWM 112
            K    + +   Y  +G  +  +       +H    +   P    HSY  E + +++  +
Sbjct: 21  SKSHYHDYFELYYLEEGE-RFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRLLV 79

Query: 113 EFTPTSMMDIPVGQ---------QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163
            F+   +  + + +         +      ++ ++ L ++ +    P+A   +  +  L 
Sbjct: 80  YFSKEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHED-YIHTLL 138

Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
            +    I        K  +R +I  +I+ +H + Q+  S+  +A     S  +L R F R
Sbjct: 139 NMALLTIARNIQTPVKPEKRNRITDVISYIHQNYQEDISIDQLAQMSYVSPYYLCREFKR 198

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           YT  T  +Y    R+  A  +  +   ++ E++    F +  HF++ FK   G  PS   
Sbjct: 199 YTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMTPSNFR 258

Query: 284 K 284
           K
Sbjct: 259 K 259


>UniRef50_UPI0001788A2C transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788A2C
          Length = 284

 Score =  155 bits (393), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 95/272 (34%), Gaps = 18/272 (6%)

Query: 28  SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGN 87
           + G                +  P  +  P     +   +  +G  ++   +G+++ L  N
Sbjct: 15  TPGYLDKEAQIWPVRAGRSLAKPNYRVGPKRIECYSLHFVHEGTVRLEF-DGKRVDLQKN 73

Query: 88  CIIFLKPMDIHSYH--CEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAE 145
            +  L P   + YH           W+    + +  + +    ++       Q ++   E
Sbjct: 74  DLFCLFPGRTYYYHLLPSDAPLRMSWLALDGSRVRPL-LELAGLVPESPFGRQMISSRVE 132

Query: 146 LITSPEAIKNNLA---------VAFLTKIIYQWICLMYADGKKDPQRR---QIEKLIATL 193
              S E + + LA            L  ++Y  +  M  D            I + +  +
Sbjct: 133 --KSAECVIDALAGVERWKPSVSLELHGLVYGLLAGMVPDAASAEPTELAGWINECLDYM 190

Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253
                +  SV  +A       ++   +F    G  P +Y    R+D A  LL +   ++ 
Sbjct: 191 ELHATEGISVQQVAEFAGVHRSYFSNMFTSQVGMPPLKYLQRIRMDKAKRLLTETDATIT 250

Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           E+A +L + + + F++AFK  F   P  + +N
Sbjct: 251 EIALSLGYPNLYSFTRAFKIYFKVPPITMREN 282


>UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4
           Tax=Geobacillus RepID=C9RVZ3_GEOSY
          Length = 513

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 63/174 (36%), Gaps = 7/174 (4%)

Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
                +  V    ++    I  + L   A   ++ E  +  L            I     
Sbjct: 347 GRKAEETFVWLGRLLSELGIRYERLASFASCRSAAELKRAALDE-------LDRIAADLE 399

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
             ++     ++ K    +     +  ++ ++A     S  +  +LF  + G T  +Y  +
Sbjct: 400 VWRQQQAYGKLGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTN 459

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
            R++ A   L +   S+ E+  ++ + D  +FS+ FK + G +PS   K     
Sbjct: 460 VRIERAKEALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQAR 513


>UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CTF5_PAESJ
          Length = 294

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 96/278 (34%), Gaps = 33/278 (11%)

Query: 40  YADEHYRVIWPRDKKKPLIANSWV----AVYTVQGCGKILLKNGEQITLHGNCIIFLKPM 95
           Y    Y +  P D   PL+   W      +   +G     +   +   L     IF+   
Sbjct: 17  YPVSLYEITCPSDA--PLLDLHWHDELELLLVTEGTAVFRVDLQD-YELQAGEAIFVNSG 73

Query: 96  DIHS-YHCEGLVWEQYWMEFTPTSM--------------------MDIPVGQQSVIYNGE 134
           ++HS Y   G       + F  +                       ++P   +     G 
Sbjct: 74  ELHSGYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGM 133

Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR-----QIEKL 189
                L ++ E+  + +A         L  I+ + + L     +  P++      +++ +
Sbjct: 134 ELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTV 193

Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249
           I  +  +  +   +  +A     SE++  R F R T K+P EY    R+  A S L+Q  
Sbjct: 194 IEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTD 253

Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
             + EVA  + F    +F+  F+ +FG  P        
Sbjct: 254 AKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291


>UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus
           halodurans RepID=Q9KE68_BACHD
          Length = 278

 Score =  155 bits (391), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 89/233 (38%), Gaps = 6/233 (2%)

Query: 64  AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIP 123
            ++ ++G    +  NG    L    ++                +E   + +T  +  + P
Sbjct: 46  FLFALKGEASFVF-NGTAYHLSPGKVVHGGKNMELIVKVGPAAFEYCLIHYTLHTRSNHP 104

Query: 124 VGQQSVIYNGE----IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179
               S             ++L  +  + ++P       A A    I +  +        +
Sbjct: 105 NDTDSHFLLEPGENLAITEKLDLLHRIKSTPGNFPEIQAKALFYTIFHDMLICARNRLNR 164

Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239
           + Q   IE+++  +H    +  +V  +A            LF +Y G  P +Y +  RL 
Sbjct: 165 ESQL-VIEQVVEYIHHHYMEPMTVKKLADMSGMGVKPFSYLFKKYIGMFPIDYLIQYRLK 223

Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292
            A +LL    +S+ ++A+++ + D+ +FS+ FK   G +P+A        P+D
Sbjct: 224 RAKNLLVSSNSSIADIAESIGYLDALYFSRLFKKHIGCSPTAFRAQMGNCPSD 276


>UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales
           RepID=A8RPA3_9CLOT
          Length = 339

 Score =  155 bits (391), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 97/278 (34%), Gaps = 26/278 (9%)

Query: 35  SLWHTYADEHYRVIWPRD-KKKPLI-ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFL 92
                +    Y    P D ++ P+        +   +G G + +   E         + +
Sbjct: 60  HAGRDFPFNIYPCSIPADFRQVPVHWHEDMEIIAVKKGRGVVTVDM-EPYEARAGEAVVV 118

Query: 93  KPMDIHSY-HCEGLVWEQYWMEFTPT----------------SMMDIPVGQQSVIYNGEI 135
            P  +H    C     E   + F P+                 M +  +G+   I  G  
Sbjct: 119 FPGQLHGISQCGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLP 178

Query: 136 YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY------ADGKKDPQRRQIEKL 189
                 E   ++      KN      +   ++ ++ L+       A G+    R ++++L
Sbjct: 179 DYGAFMECIGILDQLCGKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKSRERMKRL 238

Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249
           +  +     ++ +V D A     S +   + F +Y G    +Y  + RL+ A  +L    
Sbjct: 239 LEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTP 298

Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           + V  VA    F +  +F++ F+ K+G  P    KN +
Sbjct: 299 DPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKNGE 336


>UniRef50_C6J5K7 Transcriptional regulator (Fragment) n=1 Tax=Paenibacillus sp. oral
           taxon 786 str. D14 RepID=C6J5K7_9BACL
          Length = 219

 Score =  154 bits (390), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 80/216 (37%), Gaps = 9/216 (4%)

Query: 80  EQITLHGNCIIFLKPMDIHSYH-CEGLVWEQYWMEFTPTS--MMDIPVGQQS------VI 130
           E+ +     I+   P   H Y+  EG +WE  W  F P    +  +P+GQ +       +
Sbjct: 4   EKFSCTEGEIVLFPPGIPHHYYTSEGSLWEFVWAHFIPEVRWLDLLPIGQDNNGPITLQL 63

Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLI 190
                + + +     L+           +  L  +    I L            +I   +
Sbjct: 64  GKSAAFERMVLAFERLVREKRHTDRYAELLSLNALEEALIHLAQFAAVSVSLDPRIADTL 123

Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250
             +   L    ++A++A  +  S +    LF   TG +  E  L  RL  A  LLK    
Sbjct: 124 IYITDHLDAPHTIAELARRVSLSPSRFSHLFKGQTGDSVMETLLKLRLKHAARLLKHTTL 183

Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            V E+A    F   F+F+K F   +G +P+   + T
Sbjct: 184 LVSEIAGLAGFQSPFYFTKQFTAFYGMSPTDYRRKT 219


>UniRef50_A6DJ96 Arabinose operon regulatory protein n=1 Tax=Lentisphaera araneosa
           HTCC2155 RepID=A6DJ96_9BACT
          Length = 280

 Score =  154 bits (390), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/280 (20%), Positives = 97/280 (34%), Gaps = 24/280 (8%)

Query: 22  INENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQ 81
           +  NV    +  I++ H    + Y        +       W  +   +G G      G+ 
Sbjct: 1   MRHNVAPPPLRDITVGHFSLHKAYTCYREEGTQ------DWQLLIHHKGKGVFHHLQGDL 54

Query: 82  ITLHGNCIIFLKPMDIHSYHC---EGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQ 138
                 C+  L P   H Y     +   W  YW  F P     +   Q S + +G  Y +
Sbjct: 55  FMDDLECV-LLPPRVAHDYGIPEGDDGFWAAYWAHFIPRPHW-LSFLQWSEVRDGLFYFK 112

Query: 139 ------------ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQI 186
                        + E  EL     A    LA+  L +I+   I  +  D +     ++I
Sbjct: 113 IPDQKLYKKIIVLIQEAIELAKEEVAFSEQLAMNRLEEILIH-IARVQQDLEHSGLDQRI 171

Query: 187 EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLK 246
              +  +  +  +  +++ ++A    SEA   RLF +  GK+P  Y    R+  A   L 
Sbjct: 172 VSAVRYIQGNYSRSINLSILSARASLSEAAFCRLFKKEMGKSPISYLEHIRITHACHFLS 231

Query: 247 QQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
              +S+ ++   L F    HF   FK      P    +N 
Sbjct: 232 MTTHSIKDITFMLGFSSKSHFCARFKKFNHMTPLEYRRNA 271


>UniRef50_C0ZJ95 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0ZJ95_BREBN
          Length = 530

 Score =  154 bits (389), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 82/233 (35%), Gaps = 10/233 (4%)

Query: 60  NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEF----- 114
             +  +    G G + +++         C     P       C G V + Y + F     
Sbjct: 36  EDYTMIVATDGEGLLEIESSTYRFTRERC-WIAAPRQNVRISCTGHVLDYYSLTFRVVHT 94

Query: 115 ----TPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI 170
                  +       ++          + + E+ +   + EA++         +++    
Sbjct: 95  EAPTKEQACEAFFCLEELTCTPFSRVVELIAEIYKHREATEALQRFYNHVRFEELLCVLA 154

Query: 171 CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
                   +   RR +E+ IA +    Q+  +V  +A           +LF   TG+ P 
Sbjct: 155 QQNVPGKTRLDPRRAVERSIAYVEKHYQEPLTVDQLAHEANVPRWRYTQLFKEMTGEIPL 214

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           +Y    R++ A  LL   G+ + E+A  + F   ++FS+ FK + G AP    
Sbjct: 215 DYMNQLRINRAKQLLLMTGDRINEIAQNVGFNSEYYFSRRFKQRVGLAPGKYR 267


>UniRef50_B4D0H6 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter
           flavus Ellin428 RepID=B4D0H6_9BACT
          Length = 282

 Score =  154 bits (389), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 13/221 (5%)

Query: 68  VQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQ 126
           V+G G+ILL +G    L    +    P  ++++H   G  W   W+       +   VG 
Sbjct: 67  VEGEGRILL-DGRWQRLRAGELSMAPPRGLNAFHAVPGRRWVIAWVRCEEPPWIRPLVGA 125

Query: 127 QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ---- 182
            S +       +    +  L    E  ++        ++++ WI L++   ++  Q    
Sbjct: 126 GSPVRLRAGKGEMSRVIGGLRNEWEGARDP-------RMVHHWIGLLHGLLQRFAQPWRG 178

Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242
           + ++ +L   +     + W+++ +AA +  S   LRRL LR  G+TP +     R+  A 
Sbjct: 179 QERLWRLWEEVGREPAKPWTLSMLAARVHMSSEHLRRLCLRELGRTPVQQLTYLRIQRAK 238

Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            LL+   + +  +A  + +  +  FS+AFK   G  PS   
Sbjct: 239 DLLENSDDKLEAIAPAVGYVSALVFSRAFKRWVGCTPSEYR 279


>UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA
           RepID=C6JFK6_9FIRM
          Length = 283

 Score =  154 bits (389), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 25/253 (9%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYW-----ME 113
            +    +Y   G G + L N E + +    +I +    +H    +      +      + 
Sbjct: 32  HDEMELIYIESGSGLVRL-NKEILRVKAGDLIIVNRGVLHGIKTDLKNILYFRSIVFDLN 90

Query: 114 FTPTSMMDIPVGQ------------QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161
           F      D+   +              +I   +     +  + + I S    K       
Sbjct: 91  FLSGPAGDLCQERVISLLMDNQAEFTHIISRSDDNYGNICLLFDRIHSCHKEKKPYYFVK 150

Query: 162 LTKIIYQWICLM-------YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
           L  + + +   M        AD  ++     I+K++  ++ +  Q  + A++ A    SE
Sbjct: 151 LKALFFSFFYEMLMGNYITPADKDENKSLASIKKILDYINLNYSQPLTAAELTALSNYSE 210

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
            +  +LF +YTGKT   Y  D R++ A  +L    +SV E+A  + F ++ +F K F+  
Sbjct: 211 YYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSDSSVTEIALEVGFNNTSYFIKKFQQA 270

Query: 275 FGYAPSAVLKNTD 287
            G +P    +N  
Sbjct: 271 TGMSPHKFRRNLS 283


>UniRef50_D1N1W3 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N1W3_9BACT
          Length = 254

 Score =  153 bits (388), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 86/236 (36%), Gaps = 6/236 (2%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFT 115
           P        +Y + G  ++    G         ++ + P  IH+   +    +  +  F 
Sbjct: 25  PHQHGGCELIYVLDGHCRVESPAG-IFEGTPGKLLVIPPEVIHN-QIDDPGEDNIFCVFQ 82

Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
               +     +   +       +   E+ ++    +      A A L   + +       
Sbjct: 83  ANPALFAQHWRSLDLGGETRTIRMFLELCDMTEKNDLTG---ASALLLSFLQRLSAFEQK 139

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
                 Q  ++ K +  LH +L +  +V   A     S + LR+LF  Y G  P  Y  +
Sbjct: 140 QSLSTRQHPKLRKALEFLHENLTRPITVRATAEHAGISVSLLRKLFTDYCGTPPLGYLQN 199

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPT 291
            RL  A  LLK    S+ E+A    F  + +F + ++ K G +P    + +D HP+
Sbjct: 200 LRLARAEELLKNPYLSIAEIAAECGFDSAGYFIRLYRRKHGTSPGKARRRSD-HPS 254


>UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA
          Length = 278

 Score =  153 bits (388), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 103/251 (41%), Gaps = 18/251 (7%)

Query: 51  RDKKKPLIANSWVAVYTV-QGCGKILLKNGEQITLHGNCIIFLKPMDIH-SYHCEGLVWE 108
            +    +  + ++ +  + +G      +      +    ++   P   H     +G    
Sbjct: 23  SESHGEMHHHDFLEISVLLEGESTYYFEKEPAKKIRAGSVMLFNPGVDHCELQPKGTRSH 82

Query: 109 QYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV---AF 161
           Q  +     S+     +    +  ++  G+ ++Q L +  +L+      ++   +   A 
Sbjct: 83  QLHIGLKNISLEGFKRNFFPNKHPLLELGKYHHQVLEKAWQLVRESSEERDEFQLMQKAV 142

Query: 162 LTKIIYQWIC---------LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
           L +++   +          L Y    +  Q++ +   +  L    ++  ++  +A     
Sbjct: 143 LMEMLVYILRGLNEDHINVLPYLSKSQRRQQQIVNYTVYYLENHYKEEITLEKLAQDQFL 202

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           S  +L ++F   TG +P  Y ++ RL  A  +LK +  ++ EVA  + + D++HFSK+FK
Sbjct: 203 SPTYLSKIFKEATGVSPINYLIEIRLKRAKDMLKNENLTIKEVASAVGYQDAYHFSKSFK 262

Query: 273 HKFGYAPSAVL 283
             +G +PS VL
Sbjct: 263 KLYGVSPSGVL 273


>UniRef50_C6D447 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D447_PAESJ
          Length = 292

 Score =  153 bits (387), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 87/270 (32%), Gaps = 14/270 (5%)

Query: 27  ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86
           IS      S+W                  P    S+      +G  ++       +TL  
Sbjct: 19  ISELDKQGSIW--PVRGGMTETRQGYSAGPKRIESYSLHIVKEGFVRVEWDADNGVTLSA 76

Query: 87  NCIIFLKPMDIHSYHC-EGL-VWEQYWMEFTPTSMMDI----------PVGQQSVIYNGE 134
             +  L P   ++Y+  EG       W+        ++          P  + +     E
Sbjct: 77  GDLFCLFPARTYTYYAIEGEKPPRMSWIVMDGPRAAEMLALTGISCERPFLENAWTQEAE 136

Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLH 194
                L +      +  A   +L +  L   +   +C              +++ ++ + 
Sbjct: 137 RALLGLLDWMRSRETESAHVRSLDMQSLLYRLLAALCRTAPHAYALNATDWVKQSMSYIR 196

Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254
               +  +V   A     +  +    F    G  P E+    R++ A  LL +   S+ E
Sbjct: 197 QHATEGITVQQAAKAAGMNRTYYSVAFSEKVGMPPSEFITQVRMESAKRLLAETDASITE 256

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           VA T  +   + F++ FK++ G  P+A  +
Sbjct: 257 VAYTTGYSSLYAFTRTFKNRMGETPTAYRE 286


>UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula
           baltica RepID=Q7UYE3_RHOBA
          Length = 290

 Score =  153 bits (387), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 88/278 (31%), Gaps = 30/278 (10%)

Query: 39  TYADEHYRVIWPRDKKKP--LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD 96
            + D    V+  RD ++P  L  + +  +  + G   + +   +   L       +    
Sbjct: 14  FHPDGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELVTGDTFVIGGDR 73

Query: 97  IHSYHCEGLVWEQYWMEFTPTSMM------------DIPVGQQSVIYNGEIYNQEL---- 140
            H Y           + F P  +                   +        +   L    
Sbjct: 74  PHDY-LNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKRHQFTSRLQLNP 132

Query: 141 TEVAELITSPEAIKNNLAVA-----------FLTKIIYQWICLMYADGKKDPQRRQIEKL 189
            E+ E +   E++   L               L  + +   C +     +  +  +I + 
Sbjct: 133 AELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCYIRTRNPESKKLLRIAEA 192

Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249
           I+ +     +  S+ D+      S     R F      +P +Y +  R+  A  LL+   
Sbjct: 193 ISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQEASRLLRSTD 252

Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
            S+ ++A  + F DS +FS+ F+   G +P    K   
Sbjct: 253 RSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290


>UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter
           RepID=C9Y4M3_CROTZ
          Length = 289

 Score =  153 bits (387), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 15/246 (6%)

Query: 58  IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH-----CEGLVWEQYWM 112
             + W  V    G G   + NG+  TL G  + F++  D H Y      C   V  +   
Sbjct: 43  HHDFWEIVIVEHGTGT-HVFNGQPYTLSGGSVCFVRDHDRHLYEHTENLCLTNVLYRSPQ 101

Query: 113 EFTPTSMMDIPVGQQSVIY---NGEIYNQELTEVAELITSPEAIK---NNLAVAFLTKII 166
            F+  S ++  + Q+   +   +  +  Q L + + L+   EA++   +  AVA +  + 
Sbjct: 102 AFSFLSGLEKLLPQEQDGHYPSHWRVSQQTLHQASPLVERLEALRECSDVHAVASMEMLF 161

Query: 167 YQWICLMYADGKKD---PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
            Q + L+ +  +         ++ +LIA L     +      +A     S   L R   +
Sbjct: 162 MQLLILLRSGSQMQGGGHADERLNQLIAWLEDHYAEEVCWEQLADKHMLSLRTLHRQLKQ 221

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            TG TP+ Y    RL  A  LL+    SV ++A    F DS HFS  F+ +F ++P  + 
Sbjct: 222 RTGLTPQRYLNRLRLMKARYLLRHSEESVTDIAYQCGFGDSNHFSTLFRREFSWSPRDIR 281

Query: 284 KNTDQH 289
           +  D+ 
Sbjct: 282 QGRDEQ 287


>UniRef50_B4D5Y6 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter
           flavus Ellin428 RepID=B4D5Y6_9BACT
          Length = 297

 Score =  153 bits (387), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 9/237 (3%)

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSM 119
            +   +  +G G +LL  G++  L    +    P   H+   E G    +Y+++F     
Sbjct: 60  YYAVEFVAEGEGSLLLA-GKRCRLRPGVVFAYGPRVPHTIRTEPGRPMLKYYVDFVGRRA 118

Query: 120 MDIP------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM 173
            ++        G+ + +       +    +             L  A +  ++ +     
Sbjct: 119 KELLEDGPVRPGRLAQVSTPGEIREIFESLQRNGGGESPFGPALCAALIPVLLLKIAERA 178

Query: 174 YADGKKDPQR-RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232
              G  DP+     ++  A + A   +  ++ D A     + ++L RLF R+  +TP  +
Sbjct: 179 VPAGGADPRALATYQRARALIDARFLEFKTLDDAARAAGVNLSYLCRLFQRFDHQTPYRH 238

Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
            L  +++ A  LL  +G  V E A  L F D F+FS+AF+  FG AP   L  T + 
Sbjct: 239 LLHLKMNRAAQLLLDRGMLVKEAAAELGFSDPFNFSRAFRSVFGLAPEKFLARTQRR 295


>UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           cellulolyticum H10 RepID=B8I993_CLOCE
          Length = 276

 Score =  153 bits (387), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 110/277 (39%), Gaps = 18/277 (6%)

Query: 17  NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76
            I  ++ E  IS  I +  + +    EHY+    R +  P    ++   +  QG GK+++
Sbjct: 3   RIFSVLTERDISLPIFVTGVGY----EHYQDHVTRKEGFP----NYHLAFCEQGVGKLII 54

Query: 77  KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVG------QQSVI 130
            N E   +      F  P   H Y+     W   W+ F+ +S+  +         +  ++
Sbjct: 55  CNRE-YLIEQKTAFFFYPNVPHEYYPVAEPWSLRWIIFSGSSVHTLLNAAGIGRFEVYML 113

Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR--RQIEK 188
            + E       ++ +++   ++     A   L   +     L+     +   +  +++  
Sbjct: 114 NSPEEVTFCCNKLHKILLEKKSTSMLEASGVLYNFLANINKLIEEVNSEGDTQLIKKLNS 173

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ- 247
           +I  +  + ++  ++ ++A     S ++L R+F +  G +P  Y L  R++ A   L   
Sbjct: 174 IIGFIKNNFKKDITLEELATHAGISSSYLCRIFKKEYGISPFTYILRCRVNAAKEELINF 233

Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
              S+  ++    F    +F   FK   GY+P+   +
Sbjct: 234 PDKSIKAISLDTGFNSCSYFGSVFKEYEGYSPNRFRE 270


>UniRef50_C7NB40 Transcriptional regulator, AraC family n=2 Tax=Leptotrichia
           RepID=C7NB40_LEPBD
          Length = 291

 Score =  153 bits (387), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 108/266 (40%), Gaps = 13/266 (4%)

Query: 23  NENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82
            E             H+ +D+ Y   W    +K    N  +  YT+ G G+I + N    
Sbjct: 15  FEKPFPMVFIRAIGRHSISDKSY--YWDSSTRK--DKNFCLFQYTLNGQGEIKIGNKTYS 70

Query: 83  TLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFTPTS---MMDIPVGQQSVIYNGEIYNQ 138
                      P +   Y  +    WE  ++EF+  +   + ++     + IY  +  ++
Sbjct: 71  QRKDEAFFITIPGNHAYYLPQNSNFWEVLYIEFSIEADEFVKNLTNLNNNSIYKLQKNSK 130

Query: 139 ELTEVAELITSP---EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHA 195
            L  + E   +    E         +   I++++  L     +K+ +  +  K       
Sbjct: 131 LLNLIWEFYYASINNEITDIYKCSQYAYNILFEFSSLFVTKKEKNSELIKEIKKYIK--K 188

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
           + Q+  S  D++  +  S++ L R F   T  +P +Y +  RL  A  LL    +S+ ++
Sbjct: 189 NYQKPISSEDISRYVNVSKSHLTRKFKAETNISPGQYLIQTRLTKARELLLDTDSSIEKI 248

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSA 281
           +D + F  + +FSKAF+HKF  +P+ 
Sbjct: 249 SDYVGFSCANYFSKAFRHKFKISPTE 274


>UniRef50_C7MA05 Response regulator containing CheY-like receiver domain and
           AraC-type DNA-binding domain n=1 Tax=Brachybacterium
           faecium DSM 4810 RepID=C7MA05_BRAFD
          Length = 279

 Score =  153 bits (386), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 88/243 (36%), Gaps = 9/243 (3%)

Query: 54  KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE--GLVWEQYW 111
           ++   A  W+ ++TV G G +   +G  + +       L P  +H Y  +     W   +
Sbjct: 37  RRSQGAADWLLLHTVAGAGILRGADGASLPVRPGQAALLAPGALHDYGTDPAAGRWRLLY 96

Query: 112 MEFTPTS-------MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164
             F P +         ++  G  ++    E+  +    +     +         +  L  
Sbjct: 97  SHFHPPATWLALLGWPEVTPGIGTIRLGTEVEVRVRQALRGAARAARLAVGRPELFALNG 156

Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           I    +     + ++     ++  ++  + A L      A++A     S + L  LF   
Sbjct: 157 IEAALLWYDTQNPRRHQLDERVLAVLEHVDAHLATDLDAAELARVAHLSPSRLSHLFTAQ 216

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            G +   Y    RL+LA  LL+     V ++A  + F D  +FS+ F+   G +PS    
Sbjct: 217 VGTSLARYVEAQRLELAARLLEMTPEPVADIAGRVGFRDPLYFSRRFRTLRGVSPSEHRA 276

Query: 285 NTD 287
              
Sbjct: 277 RHR 279


>UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM
           3353 RepID=C0ERJ9_9FIRM
          Length = 294

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 103/278 (37%), Gaps = 27/278 (9%)

Query: 32  SLISLWHTYADEHYRVIWPRDKKKPLIA--NSWVAVYTVQGCGKILLKNGEQITLHGNCI 89
           + I     +    Y    P D +   +   +    +   +G G I+  +    ++    I
Sbjct: 17  NKIHTPDDFPYNTYLCSIPLDFQSVNLHWHDEVEIIVIKKGSG-IVSVDLTTYSVSAGDI 75

Query: 90  IFLKPMDIHSY-HCEGLVWEQYWMEFTPTSM--------------------MDIPVGQQS 128
           IF+ P  +H+    +  + E   + F  + +                    ++I     +
Sbjct: 76  IFVLPGQLHAISQKDNEIMEYENILFKSSLLKSSGYDLCNDKFIQPLFSGSLNICPVINN 135

Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK---DPQRRQ 185
                      + E+  L             A L +I+Y  +     +  K       ++
Sbjct: 136 QTPYYPPVITAINEIDHLCDLRPYAYQLSIKAHLFQILYTLVSNCGQNKIKPINQKSLKK 195

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           I+ +++ +  + Q+  ++ D+A     S+++  + F    G +  +Y  D RL++A  LL
Sbjct: 196 IKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAELL 255

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
               +++ ++A    F +  +F++ FK K+G +P    
Sbjct: 256 TTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293


>UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium
           hafniense RepID=B8FQG3_DESHD
          Length = 273

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 76/226 (33%), Gaps = 16/226 (7%)

Query: 69  QGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFT---------PTS 118
            G       +G+   +    ++   P    S    G   WE   + +          P  
Sbjct: 50  SGSACFTF-DGKPYVIEPGMVVHAGPGMRLSKEVIGDREWEYAVIHYHIPQHERDEYPLF 108

Query: 119 MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178
             D  +          +  Q L      I S            L   + Q I        
Sbjct: 109 HKDFSLAHGRSAKVPHLVRQILD-----IQSIPGAAAKFQTKVLFLSLLQEIFTAACGQP 163

Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
                + IE+ +  +  +     +V  +A            LF R+TG +P  Y ++ R+
Sbjct: 164 GQENSKLIEEAMGYIRLNYADELTVQKVADEFSVERRQFSYLFKRHTGMSPIHYLIECRI 223

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
             A  LL   G SV +VA+ + + DS +FSKAFK   G +PS   +
Sbjct: 224 SKAKELLGSPGCSVKQVAEWVGYTDSLYFSKAFKKYTGVSPSEYRE 269


>UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
           DSM 10507 RepID=C0CH60_9FIRM
          Length = 278

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 98/250 (39%), Gaps = 12/250 (4%)

Query: 51  RDKKKPLIANSW-VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWE 108
           +D       + +    Y V G GK L +N E   +    ++ + P   H+    +G   E
Sbjct: 30  KDWNSVFHTHHFTELFYVVSGEGKFLFRN-ETHHIKTGDLVIIPPYLEHTEQSVKGKSLE 88

Query: 109 QYWMEFTPTSMM--------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160
            Y +     S +              +      +I+ Q L E+       E I  NL   
Sbjct: 89  YYVIGIDKISFLAENGQTGIQAFCNFRDQSSVSDIFAQMLYEMRNDDYGSEIICQNLLEI 148

Query: 161 FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
            + +II     L+      +   ++  ++   L  +  +R ++  + +    ++ ++   
Sbjct: 149 LILRIIRSQ-RLIPISINSERMTKECAQIKEYLDTNYTERITLDTLTSLTHMNKYYMAHS 207

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           F +Y G +P +Y    RL +A +LL+   +SV ++A +  F    +F+++F+  +G  P 
Sbjct: 208 FAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQSYFTQSFRKYYGMTPL 267

Query: 281 AVLKNTDQHP 290
              +   +  
Sbjct: 268 QYRQQNAETS 277


>UniRef50_C0A9I7 AraC-type DNA-binding domain-containing protein-like protein n=1
           Tax=Opitutaceae bacterium TAV2 RepID=C0A9I7_9BACT
          Length = 271

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 7/236 (2%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKIL-LKNGEQITLHGNCIIFLKPMDIHSYHCEGLV 106
            WPR + K      +  +  V+G  + +  + GE++  H   I+ + P ++H+Y      
Sbjct: 42  CWPRRRLK-----EFELILAVRGEFEFINHETGERVEQHAGDILVIHPGELHTYRLLSSA 96

Query: 107 WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166
              ++          +P+ Q             + E+           N L    L   +
Sbjct: 97  EHAFFSCIHCMMTPRVPLDQCPPRLTHWETEHAMGELFRRADDLRRT-NGLGSGKLLAGV 155

Query: 167 YQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226
            + I L   +  + P   ++  ++  L A L +  S  D+A     +   +  +F    G
Sbjct: 156 VRLIWLYLQEPPRPPADARLTAMLDYLEAHLHKHPSRLDLAQRFRMTPQRINAIFKHELG 215

Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282
            +P  Y L A    A +L++    SV E A  L F + FHFS+ FK  +G+ PS +
Sbjct: 216 MSPGAYVLRALAGRAYALMRDDQLSVKETAHRLGFANPFHFSRVFKKIYGHPPSEI 271


>UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788F57
          Length = 292

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 97/246 (39%), Gaps = 25/246 (10%)

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH-SYHCEGLV---------WEQYWMEFT 115
           Y   G G  ++ NG++       ++ +   D+H +Y  + LV         W  + + F 
Sbjct: 48  YIKSGMGYYII-NGQKFEFQQGDVLLINSNDLHCAYETKDLVMTVISFDSTWFIHNLRFD 106

Query: 116 P---TSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI-- 170
           P   +   ++     ++I        +L  +   +      +       +  ++ Q++  
Sbjct: 107 PELFSPFREMGKHYMNLIPRDHPAMGKLRSLLFELQEEHVGEQRSYATVVYSLLLQFLAT 166

Query: 171 ----CLMYADGKKDP-----QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
               C +  +G  +P     Q  ++ ++I  +  +    W++ ++A+ +  S +    +F
Sbjct: 167 VNRQCRIEGEGGSEPSISERQLEKMRQVIMVMEQNFAHPWTLEELASLVYLSPSRFSEIF 226

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
            R  G  P  Y +  RL+ A+++L+     V +VA    F    +F++ FK   G  P A
Sbjct: 227 KRAVGMPPLLYLIHIRLEQAVTMLEGGHMKVMDVALECGFRTLTNFNRLFKKHIGMTPKA 286

Query: 282 VLKNTD 287
             K   
Sbjct: 287 SQKQHS 292


>UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis
           ATCC BAA-548 RepID=D1N277_9BACT
          Length = 315

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 95/264 (35%), Gaps = 21/264 (7%)

Query: 44  HYRVIWPRDKK--KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101
           H+   W ++    +    N +     ++G G   L + +++ L    +  L P + H+Y 
Sbjct: 35  HFMNDWEKELSHTQYHKHNFYELAVVLRGAGT-HLTDSQKLPLRPGSVFLLHPGESHAYE 93

Query: 102 CEG--------------LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELI 147
                              + +         ++  P  ++  +        EL  +   +
Sbjct: 94  YSEPLTLMNFMFDSQILRPYRKSLSGLAGYPLLFCPAEERRELCVDSATLAELDILLHAM 153

Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADG----KKDPQRRQIEKLIATLHASLQQRWSV 203
                 ++  A   L   +   + L+        +++     I   +A +  + Q+  S+
Sbjct: 154 AMESRQRSAGAELLLISHLLNLLVLVLRKSCSYVERERFNSDIGIAVAFMRRNYQEEISL 213

Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263
             +A     SE+   R F      +P ++ L+ R+  A+  L +   ++GE+A    F D
Sbjct: 214 PKLARLANLSESSFFRKFREEMKTSPMQWLLNLRIRKAMEFLIRSDMNIGEIAAATGFSD 273

Query: 264 SFHFSKAFKHKFGYAPSAVLKNTD 287
           S +FS+ F+ + G +P        
Sbjct: 274 SLYFSRQFRRQVGVSPKNYRSQAH 297


>UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=Geobacter
           uraniireducens Rf4 RepID=A5GD53_GEOUR
          Length = 291

 Score =  152 bits (384), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 14/221 (6%)

Query: 78  NGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIY- 136
            G+ +      I+ + P  +H             + F    + +  +G+   I       
Sbjct: 70  GGKTVLSQPGQIMAIDPDAVHHEMTADETPRYIAI-FIDRDLFEKELGRYPSIRPRPFRF 128

Query: 137 ------NQELTEVAELITSPEA---IKNNLAVAFLTKIIYQWICLMYADGKKDPQ---RR 184
                  + +  + E +   EA    +  L  A  T+I++  I   +     D     R 
Sbjct: 129 RTFTPGREMMGLLKEFMNEAEARLPAREPLLAAIGTRIVHALIRAAHGIITPDASIGNRV 188

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           +I ++I  +     ++ S+  +AA    S +   R+F R TG  P  Y    RL+ A  L
Sbjct: 189 EIHRVIEYIQTHAGKKLSIGQLAAVAAMSTSHFSRIFKRETGHPPLAYLNRVRLEQARKL 248

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           L+    SV  VA +  F    HF+ +F+  +G +P+  LK+
Sbjct: 249 LRTGECSVTSVALSCGFASPSHFTDSFRRFYGQSPTDFLKS 289


>UniRef50_UPI0001C35596 transcriptional regulator, AraC family protein n=1 Tax=Clostridium
           hathewayi DSM 13479 RepID=UPI0001C35596
          Length = 279

 Score =  152 bits (384), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 90/255 (35%), Gaps = 9/255 (3%)

Query: 34  ISLWHTYADEHY---RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCII 90
           +   +   + HY   R   P  K +P +       Y + G  +  +  G    +    +I
Sbjct: 3   LDFNNMIPELHYYIHRKCTPNWKIEPHVIPFIDITYVIDGKAEYNI-GGRTYIVKKGDLI 61

Query: 91  FLKPMDIHSYHCEGLVWEQYWME--FTPTSMMDIPVGQQSVIYNGEIYNQELT---EVAE 145
            +      S         + +    F              +I +  I  + ++   E+ E
Sbjct: 62  CIPQNTFRSAVNIPEDLMECYSTNIFLRNQFGQEAYLPVPIISHIGIIPRLISRFHEIHE 121

Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVAD 205
                +          L  I+YQ   L+  +     +  +I+  I  +     +  ++  
Sbjct: 122 EWVQKDFGYMLKIRGILCLILYQISNLILNENHLSQEDPRIKSSIRYMSLHYAEPLTIDR 181

Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265
           MA        +   LF    G T K+Y +  RL+ A ++LK    SV EVA    F D F
Sbjct: 182 MAEQFHLHPVYYGSLFREAMGMTFKQYLISLRLNYAENMLKSGEYSVSEVALQCGFSDIF 241

Query: 266 HFSKAFKHKFGYAPS 280
           +FSK FK K G  PS
Sbjct: 242 YFSKLFKEKKGIPPS 256


>UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D3K6_PAESJ
          Length = 277

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 79/239 (33%), Gaps = 14/239 (5%)

Query: 64  AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIP 123
            +   +G G  ++ +G+   +    ++       H        +   +  F    +   P
Sbjct: 40  LLLVEEGRGTFVV-DGKPYEVGPGTVLLYHRGIWHEEWSTHYPFRATYFAFKDLQVKGCP 98

Query: 124 VG------QQSVIYNGE-------IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI 170
                   Q  VI  GE       +  + L E+   +    A  N+L    L ++     
Sbjct: 99  QNYFLGPDQAPVIELGEKTDETASLVRECLAELHSGLAESRAAANHLFGLLLARLARLVP 158

Query: 171 CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
                     P    + K    +  + QQ  ++  +A     S+ +L  LF +  G +  
Sbjct: 159 GESTERRIVKPAEAAVIKARGYIEENYQQPITLEQLAKVTFVSKYYLSHLFQQEVGISVI 218

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
           ++ +  R++ A   L   G  V E+ + + +     F   FK   G  P    ++  + 
Sbjct: 219 QFLIQCRMEAAKRYLIMTGRPVKEIGELVGYQSEPTFHNLFKKVTGLTPGQFRESAREK 277


>UniRef50_UPI0001788DE5 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788DE5
          Length = 285

 Score =  152 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 100/276 (36%), Gaps = 19/276 (6%)

Query: 16  YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75
           Y IP  +       GI ++    + A  +Y V        P I+ ++   + + G   + 
Sbjct: 13  YGIPSDMERKG---GIWILRAGRSLARPNYSV-------GPKISENYALHFVLNGKISLA 62

Query: 76  LKNGEQITLHGNCIIFLKPMDIHSY-HCEGLV---WEQYWMEFTPTSMMDIPVG---QQS 128
             + + +TL       L P   +SY    G         W+     +            S
Sbjct: 63  FGD-KVVTLSAGDAFCLFPHTRYSYWEPNGDPEPTLRMQWIVLDGEAAESALTRIGLHPS 121

Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIE 187
             +   +    L  V + I                K +YQ   L+ A   K++ +   +E
Sbjct: 122 TPFLHNVMKGGLQAVLDQIYGCVDDDTIGHEFGRQKRLYQLFELLAAAPAKRETKPNWLE 181

Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247
           + +  + +   +  +V D+          L   F+R  G +P  Y +  R++ A  LL +
Sbjct: 182 QSVHYMDSHYMEGITVTDVVHQAGVHRTHLYCEFIRVHGISPSHYLMKLRMERAAVLLTE 241

Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
              SV EVA +L + +   FS+AF   +  +P++  
Sbjct: 242 TDVSVTEVAFSLGYSNLHTFSRAFAKYYRISPTSYR 277


>UniRef50_C6J3G2 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786
           str. D14 RepID=C6J3G2_9BACL
          Length = 289

 Score =  152 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 92/246 (37%), Gaps = 10/246 (4%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVW 107
            W R  ++P     +  ++T++G G+  L  GE ++L     + LKP   HSY+     W
Sbjct: 33  AWERVFQRPEGYPYYHWLHTLEGEGRFELL-GEAVSLTKGKGVLLKPFTPHSYYPVSDRW 91

Query: 108 EQYWMEFTPTS----MMDIPVGQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAVAF 161
              ++ F   S    M  + +   +    GE   +     ++   I   E+         
Sbjct: 92  STIYITFGGDSAASIMESLNMNTSTFYEEGEEQSFGALFNDLFRRIDQAESHSEIEVSTD 151

Query: 162 LTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
           L   + Q       + +    +   +++ ++  +   L     + ++A         L  
Sbjct: 152 LYYFLMQLRKFGMLNNRPSLSQYYNKLQPIVHWMEQHLADNIGLQEIAEHAHIGMNALHE 211

Query: 220 LFLRYTGKTPKEYYLDARLDLALS-LLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278
           LF +    +P  Y +  RL  A   +L+    ++ EVA+   F D  HF   F+ K G  
Sbjct: 212 LFQQAFDMSPYSYLIQLRLREAKKIMLQHPNRALREVAEQTGFNDVSHFVATFRKKEGIT 271

Query: 279 PSAVLK 284
           P    +
Sbjct: 272 PGKYRE 277


>UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1
           Tax=Anaerocellum thermophilum DSM 6725
           RepID=B9MLQ2_ANATD
          Length = 519

 Score =  152 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 68/158 (43%)

Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEK 188
           ++  G   + E  +V +LI+          V    K +           ++      I K
Sbjct: 356 LLETGIATSDESIDVEKLISQILNSSYEQIVEIFKKAVLSLFSKAKTKHEQIINNDSINK 415

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
            I  ++ +  +  +++ +++T   +  +  +LF +YTG + K Y    R+  A  LLK  
Sbjct: 416 AIEFINQNYSEEITLSQISSTFNFNPYYFSKLFKKYTGVSFKTYLTKLRIQKACQLLKNT 475

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
             S+ E++  + F D  +F KAFK   G  PSA   ++
Sbjct: 476 SKSIKEISFAVGFSDPNYFIKAFKKFTGMTPSAFRSSS 513


>UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae
           ATCC 43184 RepID=A7AA81_9PORP
          Length = 287

 Score =  152 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 92/258 (35%), Gaps = 19/258 (7%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104
           +    P +   P         Y  +G   + L+N E I+   N ++ +     H++    
Sbjct: 31  FVSFRPFETFGPHKHLRIEINYVKKGNCILHLEN-ESISFSENEMMVICSNVEHTFEAGS 89

Query: 105 LVWEQYWMEFTPTSMMDIPV------------------GQQSVIYNGEIYNQELTEVAEL 146
                  +EF P                           +   I N     + +  +   
Sbjct: 90  EDTTLMQLEFLPEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVNE 149

Query: 147 ITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADM 206
           +         L V +  +++      +            ++K I+ +  + Q   +++D+
Sbjct: 150 MNQKSKYYQYLVVMYYAELLILIYRYLDEAYLPICTNDSLKKAISYIRLNYQSDITISDV 209

Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266
           A+     E +LR+LF +Y   +P +Y    R++ A+ LL+    SV EV     F    +
Sbjct: 210 ASQTGVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQSPQY 269

Query: 267 FSKAFKHKFGYAPSAVLK 284
           FS+ FK + G +P  V K
Sbjct: 270 FSRIFKQQMGISPREVTK 287


>UniRef50_D2Q274 Transcriptional regulator, AraC family n=1 Tax=Kribbella flavida
           DSM 17836 RepID=D2Q274_9ACTO
          Length = 261

 Score =  152 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 88/249 (35%), Gaps = 10/249 (4%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL--VWEQY 110
             +      W+   T+ G G+     G+      +    ++P  +  Y  E     W   
Sbjct: 14  TYRARGTTDWLLFLTLGGRGRFGTFAGDVYA-GPSTATLVRPGTLQDYGVEAELLRWHFR 72

Query: 111 WMEFTPT-------SMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163
           +  F P           +   G   +  + +   +    +A  +    ++ +   +  L 
Sbjct: 73  YAHFHPKPDWLPLLDWPEAAPGILQLHLSEDAAQRIADNLAAAVRHQSSVLSQGELLSLN 132

Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
            +    +     + K  P   ++ ++I  +   L+    VA +A     S +    LF  
Sbjct: 133 ALEAALLWADTQNPKATPIDDRLLRVIELIDRDLKADLDVARLARAANLSPSRFAHLFRE 192

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
             G TP+++    R++ A  LL+     +  VA    F D  +FS  F+   G +P+A  
Sbjct: 193 QLGVTPQQFVERRRIEAARRLLELTTRPISSVAAEAGFPDPLYFSTRFRRHTGISPTAYR 252

Query: 284 KNTDQHPTD 292
           ++    P D
Sbjct: 253 RDEKARPGD 261


>UniRef50_C2H081 AraC family transcriptional regulator n=31 Tax=Bacilli
           RepID=C2H081_ENTFA
          Length = 290

 Score =  152 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 102/261 (39%), Gaps = 13/261 (4%)

Query: 36  LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPM 95
            ++      ++   P   ++     S++  +T+ G G++  +     +L    + F+   
Sbjct: 30  FYYIQEIGQFKASRPYYTER-AHLPSYLIKFTLNGTGELRYRY-HTYSLQRGDLFFIDCR 87

Query: 96  DIHSYHC-EGLVWEQYWMEFTPTSMMDI---------PVGQQSVIYNGEIYNQELTEVAE 145
           D   Y       WE  W+ F   +             PV   + +      +  + ++ +
Sbjct: 88  DYQYYQATSEEPWEMDWIHFEGGNSGAFFQEFMKNGSPVFSTNQLPEDNPIHLIIQQLLQ 147

Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIEKLIATLHASLQQRWSVA 204
           L     A  +  +   + +++ + +   Y  D   +     + ++ A +    ++  S+ 
Sbjct: 148 LQDLQHAQTDYQSSVLIHQLLNELLLQKYRQDFTYETIPSLVLEMKAYIDQHFKETISLE 207

Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264
           D+A     ++  L + F +Y G  P +Y +  ++  +  LL+    +V E+A  +   + 
Sbjct: 208 DLAQLFHLNKYQLNKEFSKYIGLPPIKYQISKKISYSKDLLRYSNQTVKEIAVDVGLENY 267

Query: 265 FHFSKAFKHKFGYAPSAVLKN 285
            +FS+ FK + G  PS   K+
Sbjct: 268 AYFSRLFKKRTGLTPSQYRKS 288


>UniRef50_C0Z8E4 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0Z8E4_BREBN
          Length = 548

 Score =  152 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 101/259 (38%), Gaps = 13/259 (5%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWE 108
           P +       ++   +   +G G++L +  +Q  L     + L          +      
Sbjct: 25  PTEAWTFSGESTHAVLIVTKGSGRMLSE-SDQAALLDGSALVLSRESARQISADTDDPLR 83

Query: 109 QYWMEFTPTSMMDIPVGQQSVI------YNGEIYNQ--ELTEVAELITSPEAIKNNLAVA 160
                F      D      S        ++  +++Q    TE+A  + +     + L   
Sbjct: 84  FLVFYFDALQQQDQVSNDYSPSLSWHLDHSSCVFHQVDNSTELALTLYAHRQANDPLEAF 143

Query: 161 FLTKIIYQWICLMYADGKKDPQRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
                  Q + L+++  ++         +++ I+ +H +  +  ++ D+A     +  + 
Sbjct: 144 QNQIRFQQLLHLIWSHAERQATVETSSVVDQTISYMHTNYAEPITLDDLANRAGLTPRYY 203

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
             +F +  GK+P EY    R++ A +LL++    + EVA  + + D F+FS+ FK + G 
Sbjct: 204 TEVFKKKVGKSPIEYLTSCRMEHAKTLLRESNKRLREVARLVGYADEFYFSRRFKQQVGV 263

Query: 278 APSAVLKNTDQHPTDASPH 296
           +P+  ++   +     + H
Sbjct: 264 SPTVFVRMNQKQMAPVTFH 282


>UniRef50_B5JCR2 Transcriptional regulator, AraC family protein n=1
           Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCR2_9BACT
          Length = 282

 Score =  152 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 10/242 (4%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFT 115
               ++  ++   G G     +G +       +I + P   H+Y  +    WEQ ++ F 
Sbjct: 42  RTLGNYALIFIRSGQGTYSDAHGLKHPFAAGDVIQVFPDLAHAYGPDHSGRWEQAYVVFN 101

Query: 116 PTSM-----MDIPVGQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQ 168
                      I   +  +   G +  + + L EV           +   +   T +I  
Sbjct: 102 GPQFNLLRQAGILTPENPIWQLGPVEYWQRRLEEVFPEAAPQGDSASTRTMGRFTSLITD 161

Query: 169 WICLMYADGKKDPQRRQIEKLIATLHASLQQRW-SVADMAATIPCSEAWLRRLFLRYTGK 227
            +    A+ K+ PQ+  + + +  L     + W +  + A ++  S    R+LF ++ G+
Sbjct: 162 -MAATQAESKQSPQQAWLGESMRLLAEPSSKTWLTPQEAAQSVGLSYENFRKLFAKHVGE 220

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +P  +    R++ A +++ Q   S  E+AD   F D FHFSK F    G +PS   K   
Sbjct: 221 SPAAFQKRRRIEHACAMIYQSSRSFKELADEHGFCDVFHFSKVFSQVMGESPSDYRKRVK 280

Query: 288 QH 289
             
Sbjct: 281 GQ 282


>UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI00017894C2
          Length = 310

 Score =  151 bits (382), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 34/261 (13%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-----------YHCEGLV- 106
            + +   Y  +G   +     +   +    I  + P  +HS           Y CE +  
Sbjct: 49  HDYFQIWYVAKGA-FLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFMPS 107

Query: 107 -------------------WEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELI 147
                              + +Y++     +   I +   + +    +    L E     
Sbjct: 108 FVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYERRT 167

Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADG--KKDPQRRQIEKLIATLHASLQQRWSVAD 205
              +       +  L+ +  Q    +  +G  K +  R  + +++  +H   Q+  ++ D
Sbjct: 168 PFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMNLND 227

Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265
           + +    S +    LF  +TGKT   Y  D R+  A+ +LKQ   SV +V  +  F +  
Sbjct: 228 LCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFNELS 287

Query: 266 HFSKAFKHKFGYAPSAVLKNT 286
           +F + FK   G +P+   K  
Sbjct: 288 YFCRIFKKYTGISPTDFRKQA 308


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P31449 Uncharacterized HTH-type transcriptional regulat...   297   4e-79
UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R...   244   3e-63
UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali...   231   2e-59
UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero...   230   3e-59
UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C...   230   5e-59
UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ...   230   5e-59
UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostri...   227   3e-58
UniRef50_UPI0001788616 transcriptional regulator, AraC family n=...   227   4e-58
UniRef50_C7PPV8 Transcriptional regulator, AraC family n=3 Tax=S...   227   4e-58
UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=C...   225   1e-57
UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco...   225   2e-57
UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostri...   222   1e-56
UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac...   221   2e-56
UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostri...   221   2e-56
UniRef50_A6VAM9 Transcriptional regulator, AraC family n=3 Tax=P...   221   3e-56
UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C...   220   6e-56
UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto...   219   1e-55
UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco...   218   2e-55
UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides R...   218   3e-55
UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=C...   217   3e-55
UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=P...   217   4e-55
UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=C...   217   5e-55
UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID...   217   5e-55
UniRef50_A1U2J4 Transcriptional regulator, AraC family n=3 Tax=M...   216   5e-55
UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=D...   216   6e-55
UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri...   216   6e-55
UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Ta...   216   7e-55
UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=B...   216   7e-55
UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=u...   216   8e-55
UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n...   216   9e-55
UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel...   215   1e-54
UniRef50_A4XS27 Transcriptional regulator, AraC family n=1 Tax=P...   215   1e-54
UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n...   215   1e-54
UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=H...   215   2e-54
UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostri...   215   2e-54
UniRef50_C6XV52 Helix-turn-helix-domain containing protein AraC ...   215   2e-54
UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 ...   215   2e-54
UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=C...   215   2e-54
UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P...   214   3e-54
UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bactero...   214   3e-54
UniRef50_C6IJ00 Transcriptional regulator n=2 Tax=Bacteroides Re...   214   4e-54
UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=P...   213   5e-54
UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridiu...   213   6e-54
UniRef50_C7PUR1 Transcriptional regulator, AraC family n=1 Tax=C...   213   7e-54
UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp....   213   7e-54
UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=D...   213   8e-54
UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales ...   213   8e-54
UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=C...   212   9e-54
UniRef50_UPI0001C34C27 transcriptional regulator, AraC family pr...   212   1e-53
UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella ori...   212   1e-53
UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ...   211   2e-53
UniRef50_P28809 MmsAB operon regulatory protein n=6 Tax=Pseudomo...   211   2e-53
UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerot...   211   2e-53
UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptoco...   211   2e-53
UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminoc...   210   4e-53
UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=C...   210   4e-53
UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bactero...   210   4e-53
UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1...   210   4e-53
UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales...   210   5e-53
UniRef50_A4AC34 Transcriptional regulator, AraC family protein n...   210   6e-53
UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabac...   210   7e-53
UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS fami...   210   7e-53
UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C...   210   7e-53
UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales ...   209   1e-52
UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=M...   208   1e-52
UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales ...   208   1e-52
UniRef50_C6IY48 AraC family transcriptional regulator n=1 Tax=Pa...   208   2e-52
UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=C...   208   2e-52
UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pe...   208   2e-52
UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1...   208   2e-52
UniRef50_A6M1I8 Transcriptional regulator, AraC family n=1 Tax=C...   208   2e-52
UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P...   208   2e-52
UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides Re...   207   3e-52
UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=P...   207   3e-52
UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococ...   207   4e-52
UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostri...   207   4e-52
UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=L...   206   5e-52
UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Or...   206   5e-52
UniRef50_B8KL56 AraC protein, arabinose-binding/dimerisation n=1...   206   8e-52
UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus s...   206   9e-52
UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Ba...   205   1e-51
UniRef50_C9KYS9 Transcriptional regulator n=7 Tax=Bacteroides Re...   205   2e-51
UniRef50_C5BZM6 Transcriptional regulator, AraC family n=1 Tax=B...   205   2e-51
UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulator...   205   2e-51
UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=P...   205   2e-51
UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=D...   205   2e-51
UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=J...   205   2e-51
UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=B...   204   2e-51
UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales ...   204   4e-51
UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Ba...   204   4e-51
UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon tra...   203   6e-51
UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1...   203   6e-51
UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=S...   203   7e-51
UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=b...   202   1e-50
UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=P...   202   1e-50
UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=R...   202   1e-50
UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri...   201   2e-50
UniRef50_UPI00017450D3 transcriptional regulator, AraC family pr...   201   3e-50
UniRef50_C6LM61 Putative raffinose operon transcriptional regula...   201   3e-50
UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=La...   200   4e-50
UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein,...   200   4e-50
UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=M...   200   7e-50
UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum...   200   7e-50
UniRef50_C9AKD6 AraC-type DNA-binding domain-containing protein ...   199   8e-50
UniRef50_A8YTU0 Msm operon regulatory protein n=3 Tax=Lactobacil...   199   9e-50
UniRef50_B0MEA0 Putative uncharacterized protein n=1 Tax=Anaeros...   199   1e-49
UniRef50_B8FW52 Transcriptional regulator, AraC family n=2 Tax=D...   199   1e-49
UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=...   198   1e-49
UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=P...   198   1e-49
UniRef50_A5ZSJ3 Putative uncharacterized protein n=4 Tax=Clostri...   198   2e-49
UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri...   197   3e-49
UniRef50_A0Y944 Transcriptional regulator, AraC family protein n...   197   5e-49
UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecali...   196   7e-49
UniRef50_D2Q7T6 AraC-type transcriptional regulator n=2 Tax=Bifi...   196   8e-49
UniRef50_B0MNH5 Putative uncharacterized protein n=1 Tax=Eubacte...   196   8e-49
UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=S...   196   9e-49
UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=L...   196   9e-49
UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C...   196   1e-48
UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivor...   196   1e-48
UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=B...   196   1e-48
UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=P...   195   1e-48
UniRef50_B8H8F4 Transcriptional regulator, AraC family n=1 Tax=A...   195   2e-48
UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax...   195   2e-48
UniRef50_B0MR70 Putative uncharacterized protein n=1 Tax=Eubacte...   195   2e-48
UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C...   194   3e-48
UniRef50_Q5WK33 AraC/XylS family transcriptional regulator n=1 T...   194   4e-48
UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc...   193   4e-48
UniRef50_A0QZE6 MmsAB operon regulatory protein n=1 Tax=Mycobact...   193   5e-48
UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=...   193   5e-48
UniRef50_A9KKI4 Transcriptional regulator, AraC family n=1 Tax=C...   193   5e-48
UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostri...   193   5e-48
UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T...   193   6e-48
UniRef50_P43465 Raffinose operon transcriptional regulatory prot...   193   7e-48
UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C...   193   7e-48
UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C...   193   8e-48
UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri...   192   1e-47
UniRef50_Q5WK82 AraC/XylS family transcriptional regulator n=1 T...   192   1e-47
UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri...   192   1e-47
UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=L...   192   1e-47
UniRef50_C6CWX0 Transcriptional regulator, AraC family n=1 Tax=P...   192   1e-47
UniRef50_C6D174 Transcriptional regulator, AraC family n=1 Tax=P...   192   1e-47
UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P...   191   2e-47
UniRef50_C6D3L8 Transcriptional regulator, AraC family n=1 Tax=P...   191   2e-47
UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=L...   191   2e-47
UniRef50_A4XK77 Transcriptional regulator, AraC family n=2 Tax=C...   191   2e-47
UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bactero...   191   3e-47
UniRef50_C6D787 Transcriptional regulator, AraC family n=1 Tax=P...   190   4e-47
UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostri...   190   5e-47
UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostri...   190   5e-47
UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi...   190   6e-47
UniRef50_C6D447 Transcriptional regulator, AraC family n=1 Tax=P...   190   7e-47
UniRef50_C7G8V7 Putative raffinose operon transcriptional regula...   190   7e-47
UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P...   190   8e-47
UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R...   189   9e-47
UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte...   189   1e-46
UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr...   189   1e-46
UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T...   189   1e-46
UniRef50_C2EN40 AraC family transcriptional regulator n=2 Tax=La...   188   2e-46
UniRef50_A5ZYS8 Putative uncharacterized protein n=1 Tax=Ruminoc...   188   2e-46
UniRef50_UPI000196AF05 hypothetical protein CATMIT_01210 n=1 Tax...   188   2e-46
UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabin...   188   2e-46
UniRef50_C7Q5G1 Transcriptional regulator, AraC family n=1 Tax=C...   188   2e-46
UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc...   188   2e-46
UniRef50_C0X7J7 AraC family transcriptional regulator n=22 Tax=E...   188   3e-46
UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte...   187   3e-46
UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type...   187   5e-46
UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=C...   186   6e-46
UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe...   186   6e-46
UniRef50_C8Q370 Transcriptional regulator, AraC family n=1 Tax=P...   186   7e-46
UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B...   186   7e-46
UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri...   186   8e-46
UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family prot...   186   8e-46
UniRef50_O33813 Lactose operon transcription activator n=4 Tax=S...   186   9e-46
UniRef50_UPI0001788255 transcriptional regulator, AraC family n=...   185   1e-45
UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri...   185   1e-45
UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R...   185   2e-45
UniRef50_UPI0001788A2C transcriptional regulator, AraC family n=...   185   2e-45
UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri...   185   2e-45
UniRef50_C7T9S5 Putative transcriptional regulator n=2 Tax=Lacto...   184   3e-45
UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac...   184   3e-45
UniRef50_Q6PU53 BgaR n=2 Tax=Bacillus megaterium RepID=Q6PU53_BACME   184   3e-45
UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-...   184   3e-45
UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1...   184   4e-45
UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n...   184   4e-45
UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos...   183   4e-45
UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1...   183   5e-45
UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C...   183   5e-45
UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 T...   183   5e-45
UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C...   183   5e-45
UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=C...   183   7e-45
UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ...   183   9e-45
UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=C...   183   9e-45
UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopi...   182   1e-44
UniRef50_A4BF96 Arabinose operon regulatory protein n=1 Tax=Rein...   182   1e-44
UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr...   182   1e-44
UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc...   182   1e-44
UniRef50_B0N996 Putative uncharacterized protein n=1 Tax=Clostri...   182   1e-44
UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C...   182   1e-44
UniRef50_B0NXL6 Putative uncharacterized protein n=1 Tax=Clostri...   182   2e-44
UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro...   181   2e-44
UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s...   181   2e-44
UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia...   181   2e-44
UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ...   181   2e-44
UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=P...   181   3e-44
UniRef50_UPI0001788DE5 transcriptional regulator, AraC family n=...   181   3e-44
UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=P...   181   3e-44
UniRef50_C6JAN7 Helix-turn-helix domain-containing protein n=2 T...   181   3e-44
UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=...   181   3e-44
UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=...   181   4e-44
UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=P...   180   4e-44
UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc...   180   4e-44
UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID...   180   4e-44
UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D...   180   5e-44
UniRef50_C6D456 Transcriptional regulator, AraC family n=1 Tax=P...   180   5e-44
UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=P...   180   5e-44
UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri...   180   5e-44
UniRef50_C6IZ62 Transcriptional regulator n=1 Tax=Paenibacillus ...   180   6e-44
UniRef50_UPI0001C35596 transcriptional regulator, AraC family pr...   179   7e-44
UniRef50_C4FY02 Putative uncharacterized protein n=1 Tax=Catonel...   179   7e-44
UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero...   179   7e-44
UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibr...   179   9e-44
UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus c...   179   9e-44
UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero...   179   1e-43
UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=P...   179   1e-43
UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10 Tax=...   179   1e-43
UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa...   179   1e-43
UniRef50_UPI0001788D3A transcriptional regulator, AraC family n=...   178   1e-43
UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=...   178   1e-43
UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P...   178   1e-43
UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=P...   178   2e-43
UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonel...   178   2e-43
UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C...   178   2e-43
UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ...   178   2e-43
UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan...   178   2e-43
UniRef50_C4Z413 AraC family transcriptional regulator, arabinose...   178   2e-43
UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc...   178   2e-43
UniRef50_C4ZBP1 Two-component response regulator n=2 Tax=Clostri...   178   2e-43
UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ...   178   2e-43
UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict...   178   2e-43
UniRef50_C6J3G2 Transcriptional regulator n=1 Tax=Paenibacillus ...   178   3e-43
UniRef50_A5Z7W7 Putative uncharacterized protein n=1 Tax=Eubacte...   177   3e-43
UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero...   177   4e-43
UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C...   177   4e-43
UniRef50_C2H081 AraC family transcriptional regulator n=31 Tax=B...   177   4e-43
UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ...   177   5e-43
UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA met...   177   5e-43
UniRef50_P07642 Arabinose operon regulatory protein n=160 Tax=Pr...   176   6e-43
UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa...   176   7e-43
UniRef50_UPI0001C37EF8 AraC family transcriptional regulator n=1...   176   7e-43

Sequences not found previously or not previously below threshold:

UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali...   181   3e-44

>UniRef50_P31449 Uncharacterized HTH-type transcriptional regulator yidL n=55
           Tax=Enterobacteriaceae RepID=YIDL_ECOLI
          Length = 297

 Score =  297 bits (760), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 297/297 (100%), Positives = 297/297 (100%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN
Sbjct: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120
           SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM
Sbjct: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM 120

Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180
           DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD
Sbjct: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
           PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL
Sbjct: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297
           ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN
Sbjct: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297


>UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae
           RepID=D1PMJ1_9FIRM
          Length = 285

 Score =  244 bits (624), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 99/252 (39%), Gaps = 14/252 (5%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101
           +  +    P     P + + ++    V G G   +  G   TL    +   KP  + +Y 
Sbjct: 23  NCGHEYCVPGHTWGPGVRDHYLIHLVVAGKGVYQVG-GVSHTLQEGDLFLAKPNQLITYA 81

Query: 102 CEG-LVWEQYWMEFTPT----SMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156
            +    WE YW+ F        +   P      +++ +        +  +  S       
Sbjct: 82  ADETDPWEYYWVGFNGACANKLVQQTPFSDLHPVHHCKDPQAVREALYNIYLS--RGPEP 139

Query: 157 LAVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLHASLQQRWSVADMAATI 210
              A +T  +Y ++  +  + +           + +   I  +  +     SV D+A  +
Sbjct: 140 QCEALMTGYLYIFMAHLMKEARDAMPNVGSSSSQYVLSAIKYIQFNYSHDISVDDIAKAV 199

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             S + L R+F+   G++P +Y  + R+  A SLLK    S+ E+A ++ FFD F+FS+ 
Sbjct: 200 GVSRSHLYRVFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRV 259

Query: 271 FKHKFGYAPSAV 282
           FK   G  PS  
Sbjct: 260 FKKVKGVPPSKY 271


>UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium
           prausnitzii M21/2 RepID=A8SBA6_9FIRM
          Length = 286

 Score =  231 bits (590), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 96/250 (38%), Gaps = 10/250 (4%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101
           +       P     P I + ++    V G G   +  G    +    + F +P  +  Y 
Sbjct: 23  NCGLERCAPGQTWGPGIRDHYLIHLVVSGKGIFEVG-GRTWEVSEGDLFFARPSQLIRYT 81

Query: 102 CEGL-VWEQYWMEFTPT----SMMDIPVGQQSVIYNGEIYNQELTEVAELITSP--EAIK 154
            +    WE  W+ F           +P    + +++    +     +  + +S   +   
Sbjct: 82  ADEQQPWEYSWVGFNGACAHKLAAQLPFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQD 141

Query: 155 NNLAVAFLTKIIYQWICLMYA--DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
               V +L   I   +    A          + +   I  +  +     S+ D+A ++  
Sbjct: 142 EAAMVGYLYLFIAALMRETSAGKPHTASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGV 201

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           S + L R+F+   GK+P +Y  + R++ A  LL+    S+ EVA ++ FFD F+FS+ FK
Sbjct: 202 SRSHLYRVFMLNVGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFK 261

Query: 273 HKFGYAPSAV 282
              G  PS  
Sbjct: 262 RAKGVPPSKY 271


>UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM
           17135 RepID=B5CXD1_9BACE
          Length = 293

 Score =  230 bits (588), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 57/296 (19%), Positives = 114/296 (38%), Gaps = 21/296 (7%)

Query: 6   QSSDVKNETPYNIP----LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61
           +     NE    IP    L I EN ++  +    + +    E +       +++   +  
Sbjct: 4   KKDGFPNEKAIVIPQENLLRIKENPMTRLLHPTDVGYYPCAEGH------YRERTEGSPQ 57

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMM 120
            + +Y  +G G   +  G+  T+  N    ++    H Y       W  YW+ FT     
Sbjct: 58  HILIYCHEGEGWYNIGKGK-CTVKKNDFFIIEAGTPHVYAASTSHPWSIYWIHFTGEQSH 116

Query: 121 DIPVGQQSVIYNGE----IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL---- 172
                    IY  +     +N  +    E++ + E   +   + ++T  ++  +      
Sbjct: 117 LFSELFNRTIYIDDSPTARFNDRIQLFNEILVNLEMGYSIENLEYITLCLWYLLGSFRYI 176

Query: 173 -MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
             + +  K   +  I+K+I  + A+L ++ ++ DMA ++  S  +L  LF + +G +P  
Sbjct: 177 PQFREINKPKTQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSGMSPIN 236

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           Y+   ++  A  LL        E+A  L F D ++FSK F      +P        
Sbjct: 237 YFNQLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSPKEYRMKKK 292


>UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales
           RepID=C4ZBG0_EUBR3
          Length = 279

 Score =  230 bits (587), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 96/256 (37%), Gaps = 11/256 (4%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
            ++      +  P I + ++  Y + G G+  + NG   TL       + P     Y  +
Sbjct: 25  GFQSCDSLYQWGPGIRDHYLIHYIISGKGRYTV-NGSVHTLTPGDAFLVYPNTEVIYQAD 83

Query: 104 -GLVWEQYWMEFTPTSMMDIPVGQQ--------SVIYNGEIYNQELTEVAELITSPEAIK 154
               WE  W+ FT +    I               + NG    ++L  + +     E   
Sbjct: 84  AQDPWEYTWVGFTGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYD-ARGTEFEN 142

Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
                  L   +  ++    +   ++     ++K I  + A+     +V D+A+ I  S 
Sbjct: 143 ALEMTGRLYTTLALFVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIGLSR 202

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
           + L R F    G +PKEY  D R+  A  LLK    S+  +A ++ F +S +FSK F   
Sbjct: 203 SHLFRSFQSILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKI 262

Query: 275 FGYAPSAVLKNTDQHP 290
            G +P        +  
Sbjct: 263 KGLSPKEYRSKYKKAQ 278


>UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786
           str. D14 RepID=C6IWJ9_9BACL
          Length = 284

 Score =  230 bits (587), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 12/255 (4%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104
               P     P + + +   +   G G + ++ GE   L G       P  +  Y  +  
Sbjct: 27  ERCAPLHSFGPGVRDIYKIHFIHSGRGIVKVE-GETFELTGGQAFLAYPERVIFYQADEV 85

Query: 105 LVWEQYWMEFTPTSMMDIP-----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159
             W   W+ F    + +I           V+        +L E+          ++    
Sbjct: 86  DPWTYSWIGFNGEQVAEILSRTRLTPASPVLPMDTHLMPQLYELLNEAEESNTTRDLRLQ 145

Query: 160 AFLTKIIYQWICLMYADG-----KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
             L + +   + L+ A G     +   +   I + +  LH+   +  SV  +AA +    
Sbjct: 146 TLLYEFMTLLVELVPASGDADSTRTQAKDAYIHRCLDFLHSHYSEEMSVGQLAAIVGLDR 205

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
            +L  LF R TG  P++Y L  R++ A +LL+    S+ EVA ++ + D+  FSK FK  
Sbjct: 206 KYLSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQDALLFSKMFKKT 265

Query: 275 FGYAPSAVLKNTDQH 289
            G +PS   +   + 
Sbjct: 266 VGTSPSDYREQWQKS 280


>UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
           35704 RepID=B0NGA4_EUBSP
          Length = 295

 Score =  227 bits (580), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 115/289 (39%), Gaps = 9/289 (3%)

Query: 2   NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61
           N   ++   K+E    IP     N       L+   +      +       +++   A  
Sbjct: 3   NNIGKADGFKDEKYIIIPTESFANYAEHP--LVRTVYPTDVGFFPKARDHYRERKEGAEQ 60

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMM 120
           ++ +Y  +G G I ++ GE   +  +    +     H Y+ +    W   W+ F   +  
Sbjct: 61  YILIYCTEGKGTIEVE-GEVFEMRKSGAFCIPCKKGHRYYADAKDPWSILWVHFKGENTA 119

Query: 121 DIPVGQQSVIYNGEIYNQ-----ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
             P+ +  V+     ++          +  ++     + N + ++ +  +I   +     
Sbjct: 120 YFPIDEPHVVPMNSRHSDNRMMVLFNLLFRVLRRNYTLGNFIYISQVLSLILSEVYYREK 179

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
             +   Q R +  +I  ++ +L +  ++ +++  +  S ++L  +F   TG++P E+++ 
Sbjct: 180 VDESSVQDRHVTMVIRFMYENLTRSLTLEEISEEVQLSRSYLNTIFKNQTGRSPVEFFIH 239

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            ++  A  LLK     + EV+  L + D ++FS+ FK   G +P     
Sbjct: 240 LKMQEACKLLKNTNLYIYEVSSRLGYEDQYYFSRIFKKVVGVSPKDYKN 288


>UniRef50_UPI0001788616 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788616
          Length = 297

 Score =  227 bits (579), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 111/294 (37%), Gaps = 13/294 (4%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           M+   +    +++    +P  I +    +  SL+   H     ++       +++P  + 
Sbjct: 1   MDTIRKPDGFESQKIIVLPDHIMKEA--ARHSLVEPLHVTDVGYFPRALHHYRERPEGSG 58

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSM 119
           +++ +Y  +G G   L  G+  +L     + + P   H Y       W  YW     T  
Sbjct: 59  AYILIYCAEGEGWYRLNGGKTYSLLKGQAVVIPPDTPHEYASSEFHPWSIYWWHMKGTHA 118

Query: 120 MDIPVGQQS-------VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII---YQW 169
             +  G           +       +   E  EL+     + + + V+ L   +    + 
Sbjct: 119 GLLFEGFTGAAEPAIVPVDQSRSIVELFQESYELLQKGYTLNHIIHVSQLAGHLAAIIRL 178

Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229
             L    G+    +  +E+ +  +   L+   S+ ++AA    S       F   TG +P
Sbjct: 179 ARLQPQRGQHQHNKHDMEQTLRFMTEHLEGHVSLKELAAYANLSIPHFTFRFKEATGYSP 238

Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            +YYL  ++  A   L   G SV E++  L F D ++FS+ FK   G +PS   
Sbjct: 239 IDYYLRLKIQRACQHLDLTGESVKEISHRLGFQDPYYFSRLFKKIMGKSPSEYR 292


>UniRef50_C7PPV8 Transcriptional regulator, AraC family n=3 Tax=Sphingobacteriales
           RepID=C7PPV8_CHIPD
          Length = 306

 Score =  227 bits (579), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 105/298 (35%), Gaps = 12/298 (4%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           M    +    + E   ++P  + +N I     L  L+ T+     R  +   + +     
Sbjct: 1   MGTLKRRDGFEGEQLISLPESVWKNAIKINPVLGQLYITHIGYFPRAAFH-YRDREKGCI 59

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGL-VWEQYWMEFTPTS 118
             + +Y   G G   + +     +  N  + +   +    Y  +    W  YW+ FT   
Sbjct: 60  DNILIYCTHGKGWYSIDD-RTFKVGMNEYVIIPATELPLRYGSDDENPWSIYWVHFTGKD 118

Query: 119 MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN--------LAVAFLTKIIYQWI 170
           M     G    +Y+G  +     +  +L  +                A   L   +  ++
Sbjct: 119 MAAFNQGFNIGLYDGPRHIHRNEKGIQLWNTMFQCLKMGFGKDNLGKANLHLYHFLATFL 178

Query: 171 CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
                  +++  R +I + I  +   L    +V ++A  +  S +    LF + TG +P 
Sbjct: 179 FPDKTPREQEQSRDRINETILYMQQHLTVALTVEELAQLVELSPSHFSTLFKKTTGMSPL 238

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
            Y++  +L  A  LL      + +V   + + D +HFS+ FK     +P        +
Sbjct: 239 NYFIHLKLQQACLLLYTTDMKIKQVGVAIGYDDPYHFSRLFKKSMHVSPEHYRGMRRK 296


>UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=Clostridiales
           RepID=A9KN44_CLOPH
          Length = 278

 Score =  225 bits (575), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 10/253 (3%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
            Y+   P  +  P + + ++  Y V G G     N +   L    +  + P    +Y+ +
Sbjct: 27  GYQRCEPNYQWGPGVRDHYLIHYIVSGKGYYET-NHKTFPLTSGDVFLIYPDTQVTYYAD 85

Query: 104 G-LVWEQYWMEFTPTSMMDIP----VGQQSVIYN----GEIYNQELTEVAELITSPEAIK 154
               WE YW+ F+ +    I        +S + +    GE    +L ++ E   +  A  
Sbjct: 86  ALDPWEYYWVGFSGSDAGLILEATDFSNESPVISSCSYGEKVKDQLYQIYEARGNEFANA 145

Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
             +A      +          + K       ++K I  + +      ++ D+AA +  S 
Sbjct: 146 VAMAGQLYITLSLFLSGASNHNKKHHQNLDYVQKGITYMESHFSYPITIDDVAAYVGISR 205

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
           + L R F  + GK+PKEY  + R+  + +LLK    S+G +A ++ + +  ++SK F+  
Sbjct: 206 SHLFREFKAHLGKSPKEYLSEYRIKYSCTLLKNTDLSIGAIATSVGYDNGLYYSKVFQSV 265

Query: 275 FGYAPSAVLKNTD 287
            G  PS       
Sbjct: 266 KGMPPSKYRNLHS 278


>UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
           27759 RepID=A8SS64_9FIRM
          Length = 328

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 92/254 (36%), Gaps = 13/254 (5%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
                     K  P +  S+V     +G G   +  G+   L       ++P +   Y  
Sbjct: 57  CGREDCIKGWKFGPYVRESYVIHIVKKGKGVFTIG-GKSYELEAGQAFIIRPGEETIYKA 115

Query: 103 EGL-VWEQYWMEFTPTSMMDIPVG----QQSVIYNGEIYNQELTEVAELITSPE--AIKN 155
           +    W   W+ F      D        + S I   E  +   T +  ++   +   I  
Sbjct: 116 DDDDPWSYMWVGFHGYRAEDFIESMGYKKDSPIIKIEQMDTCATCINNMLEYSQITRINE 175

Query: 156 NLAVAFLTKIIYQWIC-----LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210
               + L  +    +          D  + P +  ++  +  +      +  + D+A  I
Sbjct: 176 VKRQSALMMLFATIMEDNTSGQQENDNVEYPSKIYVKAAVDFITEKYMNKIKIDDIADFI 235

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             S + L   F +  G +P+EY ++ RL+ A SLL+     +  +A    + DS  FSKA
Sbjct: 236 GISRSHLTGSFKKEMGVSPQEYLINFRLEKAASLLRSSKEQINIIAYQCGYEDSLSFSKA 295

Query: 271 FKHKFGYAPSAVLK 284
           FK KFG +P +   
Sbjct: 296 FKQKFGMSPKSFRN 309


>UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
           RepID=A7VVL0_9CLOT
          Length = 282

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 9/257 (3%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101
           +  ++   P     P + + ++  Y   G G     +G+  +L       + P  + +Y 
Sbjct: 27  NCGFQRCSPGHTWGPAVRDHFLIHYITSGKGVYDSGSGK-YSLSAGDGFLVVPNRLITYW 85

Query: 102 CE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGE---IYNQELTEVAELITSPEAI 153
            +    WE YW+ F  T    +     +  +  I++ +   +Y ++L  +  L  +  + 
Sbjct: 86  ADQSDPWEYYWVGFNGTDAERLVCEAGLSAEQPIFHYDKDSLYREKLLNIYRLNGNRPSD 145

Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
           +  +    L+ +            +K      ++K +  +  +  +   V D+AA +  S
Sbjct: 146 QARMQAGLLSFMAAMMDRRPLDIQEKKSGYEYVKKSLQFIDYNYSRSIDVDDIAANVGIS 205

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            + L RLF+++    P EY    R+  A  LL+    SVGE A +  F D  +FS+ FK 
Sbjct: 206 RSHLYRLFMKHISVPPNEYLTRYRIQKASLLLESSNLSVGEAAYSTGFSDQLYFSRVFKK 265

Query: 274 KFGYAPSAVLKNTDQHP 290
             G +PS   K + +  
Sbjct: 266 YKGLSPSQYSKRSHEKK 282


>UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum
           ATCC 9817 RepID=C3WEF1_FUSMR
          Length = 285

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 98/255 (38%), Gaps = 10/255 (3%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             Y          P    +++    ++G G  ++ N ++  L       ++P  +  Y  
Sbjct: 17  CGYSECESLHSFGPASRPTYILHIVLEGKGIFVVDN-KKYFLEKGQGFIIEPNIVTFYQA 75

Query: 103 E-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV-- 159
           +    W+ +W+ F              + +       +L E+  L+      KN      
Sbjct: 76  DAKNPWKYFWIGFDGEGAEKYLRELGIIQHKPIFRTDKLDELFSLLKEMLKRKNLTLAEE 135

Query: 160 AFLTKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
             L  + Y++  L+  +       +K+     ++K+I  +  +     +V ++   +  +
Sbjct: 136 LKLQGLFYEFFSLIVEENSIEEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEYVGLN 195

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            ++L  LF +  G T +EY    RL  A  LL     S+  VA++  + D   F+KA+K 
Sbjct: 196 RSYLSTLFKKNMGITIQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFTKAYKK 255

Query: 274 KFGYAPSAVLKNTDQ 288
           K+G  P+   K   +
Sbjct: 256 KYGVTPTQHRKKDRK 270


>UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
           15053 RepID=C0C0R7_9CLOT
          Length = 322

 Score =  221 bits (564), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 112/285 (39%), Gaps = 9/285 (3%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
           ++   K+E    IP     +     +      +      +       +++   A  ++ +
Sbjct: 34  KADGFKDEKYIIIPTESFSDYAEHPLVRTI--YPTDVGFFPRARAHYREREDGAQQYILI 91

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPV 124
           Y  +G G I +++     +  +    +     H Y+ +    W   W  F     +  P+
Sbjct: 92  YCTEGKGCIEVED-RTYHIGRSDAFCIPKGRRHKYYADPEDPWSILWAHFKGEVTLCYPL 150

Query: 125 GQQSVIYNGEIYNQ-----ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179
            +  V++     +          +  ++     + N + ++ +  +I   I       + 
Sbjct: 151 EECRVVHMNSRQSDNRMMVLFKLLFRVLERNYTLGNFIYISQVLSLILSEIYFREKTDES 210

Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239
             Q R +  +I  ++ +L++  ++ +++  +  S ++L  +F   TG++P E+++  ++ 
Sbjct: 211 TVQDRHVTMVIRFMYENLKRSLTLEEISEEVKLSRSYLNTIFKTQTGRSPVEFFIHLKMQ 270

Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            A  LLK     + EV+  L + D ++FS+ FK   G +P     
Sbjct: 271 EACKLLKATDMYIYEVSSELGYEDQYYFSRIFKKVVGVSPRDYKN 315


>UniRef50_A6VAM9 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas
           aeruginosa RepID=A6VAM9_PSEA7
          Length = 293

 Score =  221 bits (563), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 108/289 (37%), Gaps = 14/289 (4%)

Query: 5   LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64
           L +  V+  TP  +   +  + +      ++L + Y + H        + +    +  + 
Sbjct: 12  LPNQGVRFITPPRLRRALARHPLGQACYPLALGY-YPEAH------GHRMQRRTPDDHLL 64

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP 123
           +Y   G G +    GE++ + G  ++ L     H+Y  +    W  YW+ F      D  
Sbjct: 65  IYCRAGRGWLECA-GERVEVGGGDLLVLPKGLEHAYGADSQRPWSIYWVHFEGVLAEDFL 123

Query: 124 VGQQSVIY-NGEIYNQELTEVAELITSPEAIKNN----LAVAFLTKIIYQWICLMYADGK 178
               SV      +  + L E   L+       +      A   L  ++            
Sbjct: 124 HPLGSVPRLRLGMQPRLLAEFDALLALRRQGLSLPHFIHAAHLLQGLLTSLAVRPARASL 183

Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
           K  +   I+ + A + A L    ++ ++AA    S     + +   TG+ P + ++  ++
Sbjct: 184 KSGRVLDIDAVQALMRAHLHDSLNLDELAAQFKLSRFHFAKTYRALTGQAPIQDFIQMKM 243

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
             A  LL +    V ++A+ L + D ++FS+ F+   G APS       
Sbjct: 244 AHACRLLDEGALEVRQIAEQLGYADPYYFSRLFRKVVGMAPSHYRALHQ 292


>UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales
           RepID=C4ZBY6_EUBR3
          Length = 280

 Score =  220 bits (560), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 101/262 (38%), Gaps = 18/262 (6%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE----QITLHGNCIIFLKPMDI 97
              +    P     P   N ++  Y + G G ++  N +       +       + P  I
Sbjct: 21  QFGHEQCEPGHSFGPATRNHYLFHYVLSGTGTLMADNAKGITQTYNIKSGQGFLIFPGQI 80

Query: 98  HSYHCEGL-VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEA 152
           ++Y  +    WE  W+EF    + +      + + + +Y+    +     V E++     
Sbjct: 81  NTYIADDKLPWEYIWIEFDGLRVKEALTTTELTKNNPVYHTHSKDIREKLVEEMLYITRH 140

Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDP-------QRRQIEKLIATLHASLQQRWSVAD 205
              +     L   +Y ++  +    K              I++ +  +  + Q   S+ D
Sbjct: 141 PSESPY--HLIGHMYLFLDYLMQSAKSSKLVPGGKMSDFYIKEAMNYIEQNFQNDISIED 198

Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265
           +A     + ++L ++F    G +P+E+ ++ R+  A  LLK    S+ +V   + + +  
Sbjct: 199 IAGVCGINRSYLGKIFKNSVGHSPQEFLMNYRMIKATELLKLTSLSIADVGSAVGYENQL 258

Query: 266 HFSKAFKHKFGYAPSAVLKNTD 287
           HFS+AFK+ +G AP        
Sbjct: 259 HFSRAFKNIYGVAPREWRNEHK 280


>UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius
           subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE
          Length = 288

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 117/277 (42%), Gaps = 14/277 (5%)

Query: 25  NVISSGISLISLWHTYADEHY--RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82
           N++++     +       +HY   +        P + +++V  + V G GK  + +G   
Sbjct: 13  NILNTYNEFNTNNFDLNVDHYGAEICAKNYSFGPTVRDNYVLHFIVDGKGKFTI-DGITT 71

Query: 83  TLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSV---IYNGEIYNQ 138
            L    +  L    +  Y  +G   W   W+ F+ +   +I    Q +     +  + ++
Sbjct: 72  QLKTGDMFILPKGKVAFYQADGEHPWTYLWVGFSGSKAENILSKTQLLDHYFCHSTLESK 131

Query: 139 ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIA 191
            L ++ +L    +   +++    LT  +Y+ +  +  +             +  I+++  
Sbjct: 132 VLDQIVKLTQFRDQKLDDVTELQLTAELYKLLAFLMKEFPSKAMSDSSILIQNYIKQVKK 191

Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251
            +H        ++++A  +  + ++L ++F   T  + K+Y +  R++ +  LL +    
Sbjct: 192 IIHTQYGNPLKISEIAKKLNLNRSYLYKIFKEETDYSLKDYLIQIRMEKSADLLTRTTFH 251

Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           + E+A+ + F D+  FSKAFK  FG +PS   K   +
Sbjct: 252 ISEIANAVGFPDALAFSKAFKKHFGQSPSHYRKALKK 288


>UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
           27759 RepID=A8SRM1_9FIRM
          Length = 296

 Score =  218 bits (555), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 91/254 (35%), Gaps = 8/254 (3%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             + +  P  K  P +   ++  + ++G G   +K G    L       ++P    +Y  
Sbjct: 22  FGHSITEPLHKAGPAVKTFYLIHFVLEGEGDFYVK-GAHYHLKKGQGFLIEPDTPATYIS 80

Query: 103 EGL-VWEQYWMEFTPTSMMD----IPVGQQSVIYNGEIYNQELTEVAELITSPEAI--KN 155
           +    W   W  F+     D    I + Q   I+  E  ++    V +++    +    +
Sbjct: 81  DEHHPWRYVWFGFSGRCAHDTLSSIGLTQNQPIFTCEDGDKLKKYVFDMLAHNTSGHADH 140

Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
              +  L   +           +       +   I+ +         V +++  +  + +
Sbjct: 141 YRLMGMLYLALSVIANAQKDKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRS 200

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           +   LF +YTG +P +Y  + R+  A  +L     SV  +A +  +  +  F K F+   
Sbjct: 201 YFSDLFKQYTGMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTT 260

Query: 276 GYAPSAVLKNTDQH 289
           G +P+A      Q 
Sbjct: 261 GLSPNAYRLGKRQR 274


>UniRef50_A6KXZ8 Transcriptional regulator n=15 Tax=Bacteroides RepID=A6KXZ8_BACV8
          Length = 306

 Score =  218 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 60/294 (20%), Positives = 118/294 (40%), Gaps = 11/294 (3%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           M+   Q +D K             +V + G   I     Y   ++   +    +K  + +
Sbjct: 1   MHYNDQGADFKYLIVNERDKRFGLSVTTVGFQAIRAGSVYPPRNHPDAYYFTAQKGRVLH 60

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM 119
            +  VY  +G G         + +    I+FL P   H+Y   +   W +Y++ F    +
Sbjct: 61  EYQLVYITKGRGTFASDTTPSVDISKGQILFLFPGQWHTYAPLQKTGWNEYYIGFEGPII 120

Query: 120 MDI----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
            ++     + ++S I +  I N+EL  +              A  +L+ I+   +  + A
Sbjct: 121 DNLVKNSFISKESQILDIGI-NEELASLFARALEVAEADKTAAQQYLSGIVLHIMGAVLA 179

Query: 176 DGKK-----DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
             +      D   ++IE     +H ++ +     ++A  +  S +W R++F  YTG  P 
Sbjct: 180 ISQNKRYEVDNAAQKIESAKIIMHENVYKDIDPEELAMKLGISYSWFRKVFKEYTGYAPA 239

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           +Y+ + +L  A  LL +   SV E+   LN+  + HF   FK +  + P+    
Sbjct: 240 KYFQELKLRKAKQLLIESSMSVKEICYELNYTSTEHFFSVFKKRTNFTPTEYRN 293


>UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           cellulovorans 743B RepID=C5RH22_CLOCL
          Length = 278

 Score =  217 bits (554), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 99/272 (36%), Gaps = 11/272 (4%)

Query: 21  LINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80
           +    +IS  I+  +              P+    P I + ++  Y + G GK    NG+
Sbjct: 3   INERYIISESINKENRDLLVYHHGIEQCIPKHCYGPAIRDHYLIHYILAGKGKFH-ANGK 61

Query: 81  QITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNG-- 133
              L       + P  +  Y  +    W   W+ F             +   ++I+N   
Sbjct: 62  IYELVTGDGFLILPDMVTFYEADENEPWTYVWIGFRGIKAAAYLESANLNMNNLIFNCTS 121

Query: 134 EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD--GKKDPQRRQIEKLIA 191
           EI  +   ++        +        +L+ I+ + I +   D           + K + 
Sbjct: 122 EILKEYFFKIMN-ANLYSSGYELRLQGYLSIILSELIDISAMDILDTNKHSDIYVRKALQ 180

Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251
            +  +     SV  +A  I  +  +   +F ++ G +PKEY +  ++  A   LK    +
Sbjct: 181 YIETNYSGSTSVDAVAKAIGLNRNYFSTIFKKHIGISPKEYIIRYKIGKACEFLKNNSLT 240

Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           + E++ ++ + D   FSK FKH  G +P    
Sbjct: 241 ISEISKSVGYNDPLSFSKVFKHIKGVSPKYYR 272


>UniRef50_C6D140 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D140_PAESJ
          Length = 296

 Score =  217 bits (553), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 63/297 (21%), Positives = 113/297 (38%), Gaps = 12/297 (4%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           M+  L+     ++    +P  I      +   LI   H      +       + +P  + 
Sbjct: 1   MDRLLKEEGFPSQKLIVLPDHILAEY--AAHPLIRPLHITDIGCFPYARHHYRHRPEGSE 58

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM 119
           +++ +Y   GCG + L + +++ +    +  +     H Y   E   W  YW+       
Sbjct: 59  AYIVMYCTDGCGWVKLDDEKRLEVRKGELTLIPAGTPHEYGSSEEEPWTIYWIHLKGELA 118

Query: 120 MDIPVGQQ------SVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM 173
                 Q         +           E  E++     + + + V+ L   +   I L+
Sbjct: 119 FSFFGEQGKAAPVPIPVERSSAIIGLFDECYEMLLKGYTLDHVIYVSQLACHLAGIIRLV 178

Query: 174 YADGKKDPQRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
            A  +  P  R+   IEK I  +   L+   S+A++AA    S     +LF + TG +P 
Sbjct: 179 QAHRQAAPSPRRQLDIEKAIQYMTEHLEDNVSLAELAAEAALSVPHFTQLFKKKTGYSPI 238

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +YYL  ++ LA   L     SV  V   + F D ++FS+ FK   G +PSA      
Sbjct: 239 DYYLRLKIQLASQYLDLTDQSVKAVGIRVGFQDPYYFSRLFKKIMGKSPSAYRSTHK 295


>UniRef50_Q488V5 Transcriptional regulator, AraC family n=1 Tax=Colwellia
           psychrerythraea 34H RepID=Q488V5_COLP3
          Length = 290

 Score =  217 bits (553), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 54/287 (18%), Positives = 108/287 (37%), Gaps = 15/287 (5%)

Query: 5   LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64
           L +  ++  TP+ +   +  + ++ G+ + ++ +                +       + 
Sbjct: 9   LTADGIRFITPHVLVKRLQNHALAKGLFVTAMGYYPTASG-------HAMERKGHPDHIL 61

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDI- 122
           +Y   G G  L   G+   ++   I +L     HSY       W  YW+ F  T   D  
Sbjct: 62  IYCTAGSG-FLTMAGKTTEINSGDIFYLPAGSQHSYQASKELPWTLYWLHFDGTLANDFC 120

Query: 123 ----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178
                V ++  I       +    ++ L  S   +   +      + +  +I L+    K
Sbjct: 121 QHINIVERKFTIGVQPRVIRVFDGISHLRHSSHNLAEFIQGGHQVQALLSYIALLVQQRK 180

Query: 179 KDPQRR-QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
                    E L A +   +  +  +  +A     S+    + F + TG++P  Y+++ +
Sbjct: 181 PSAINTFDTENLRAMMQEHIHSKLDLDSLAEAAKLSKYHFSKKFKQVTGESPISYFINMK 240

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           +  A  LL     SV  VA  L + D+++FS+ FK   G AP+   K
Sbjct: 241 MQRACYLLDSTPRSVKHVASELGYHDTYYFSRLFKKNIGMAPAIYRK 287


>UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU
          Length = 267

 Score =  217 bits (553), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 97/263 (36%), Gaps = 13/263 (4%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE- 103
            +   P     P +  +++  Y + G G+  + N +   +       + P  +  Y  + 
Sbjct: 1   MQECKPNYSYGPAVRPNYLLHYCLSGQGEYHVNN-QVYQIKAGDAFLIMPNVVTYYQADQ 59

Query: 104 GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV--AF 161
              W   W+ F  +             +N  ++   + E+ E   +  A          F
Sbjct: 60  HEPWTYLWISFDGSKTRQYLKRCNLDEHNLVVHCDYINELRETTIAILAHNKLSYSNELF 119

Query: 162 LTKIIYQWICLM-------YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
           +   +Y +   +       Y D         ++K I  +  + Q+  +V ++A  +  + 
Sbjct: 120 IQGQLYTFFSFLAKSANITYNDNVAPNYNPYVDKAIEYIQNNYQEMVTVNEIADYLSLNR 179

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
           ++L  LF ++   +P+E+ L  R+  A  LL     ++ ++A +  + +   FSKAF + 
Sbjct: 180 SYLTTLFKKHLHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKAFSNS 239

Query: 275 FGYAPSAVLKNTDQHPTDASPHN 297
              AP    K       D S  N
Sbjct: 240 HQMAPRDYRKQFK--LVDNSRMN 260


>UniRef50_A1U2J4 Transcriptional regulator, AraC family n=3 Tax=Marinobacter
           RepID=A1U2J4_MARAV
          Length = 306

 Score =  216 bits (552), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 108/279 (38%), Gaps = 11/279 (3%)

Query: 16  YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75
           Y IP  I   +    ++     +  A  HYR        +    ++ + +Y   G   + 
Sbjct: 31  YVIPEPIVRQLAHHPLTREL--YPLAFGHYRRAAGHHMHREHHRDN-LLIYCTDGKAFLN 87

Query: 76  LKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP----VGQQSVI 130
           +  GE  T+    ++ L     H Y  +    W  +W+ +T     D          + I
Sbjct: 88  VA-GEPYTVTAGDLLLLPAGVSHRYTADPDNPWTIHWVHYTGPLAEDFGQYMGFDDSTRI 146

Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ--IEK 188
            +     + L +   L++  +       +   +  + Q +  +  +  +  Q RQ  ++ 
Sbjct: 147 RHLGRQPRLLVDFNGLLSVRQTGFRARGLIHASNRLRQLLAAVPINADETSQARQAELDS 206

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
           L + +   L++R ++  +A     S A     +   TG +P +++L  +++ A  LL   
Sbjct: 207 LHSFMREHLEERLTLNQLAELSGLSPAHFATRYREQTGTSPIQHFLHLKVERACELLDTT 266

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
             S  +++  L + D+++FS+ FK   G +P+       
Sbjct: 267 SQSFADISRQLGYDDAYYFSRLFKKVMGKSPTDYRHTAR 305


>UniRef50_C6VUW2 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter
           fermentans DSM 18053 RepID=C6VUW2_DYAFD
          Length = 300

 Score =  216 bits (552), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 56/293 (19%), Positives = 115/293 (39%), Gaps = 13/293 (4%)

Query: 2   NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61
           N   +      E   ++P  I ++V     +L  ++ T+   ++       +++      
Sbjct: 3   NVFRRRDGFDGEKLISLPPGILKDVAQRNPALFQIYITHI-GYFPKALFHYRERRKGCED 61

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP-MDIHSYHCE-GLVWEQYWMEFTPTSM 119
            + +Y +QG G  ++ + ++  +  N  I L        Y  +    W  YW+ FT   +
Sbjct: 62  NILIYCIQGKGHYVIGD-KKFEVSANQFILLPATDQYIRYWADHDDPWTIYWVHFTGAGI 120

Query: 120 MDIPVGQQSVIYNGEI---YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
            +     Q     G +   +N++  ++   I     +  +L       +   +   M+  
Sbjct: 121 DNFNQSLQIAPQKGPVDILFNEKTLDIWHRIYQSLEMGYSLENLANATMCLHYFTAMFLF 180

Query: 177 GKKD------PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
            +K        +   I + I  +  +L Q+ SV DMA     S +    LF + TG  P 
Sbjct: 181 PEKHLTTEGTEKTDLITETITHMRLNLDQKLSVEDMARQHQLSCSHFSMLFRKGTGMAPV 240

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           +Y++  ++  A  L+      + E+A +L + D F+FS+ FK   G +P    
Sbjct: 241 DYFIHLKMQKACQLIYANEGKIKEIAMSLGYDDPFYFSRVFKKNMGQSPEQYK 293


>UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales
           RepID=C5EK80_9FIRM
          Length = 291

 Score =  216 bits (552), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 97/260 (37%), Gaps = 14/260 (5%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE----QITLHGNCIIFLKPMDI 97
              +    P     P   N ++  Y + G G ++  + +       +       + P  +
Sbjct: 21  QYGWEQCEPLHSYGPYARNHYLFHYVISGAGTLMSTDSKGMTNTYHIKSGEGFLIHPKQV 80

Query: 98  HSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN 156
           ++Y  +    WE  W+EF    + +        + N   ++       EL      I N+
Sbjct: 81  NTYSADRDHPWEYTWLEFDGLRVKEALELAGLTMDNPVYHSNARDLSLELKNEMLYIANH 140

Query: 157 LAVA--FLTKIIYQWICLMYADGKKDP-------QRRQIEKLIATLHASLQQRWSVADMA 207
              +   L   +Y ++  +               Q   I +  + +  + Q   SV D+A
Sbjct: 141 SDQSPFHLIGHLYLFLDYLTRSSSSRRMMRGGKLQDFYIREATSFIEQNFQNDISVEDIA 200

Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267
           A    + ++  ++F    GK+P+E+ +  R+  A  LLK    ++ ++ + + +    HF
Sbjct: 201 AFCNLNRSYFGKIFRDAVGKSPQEFLISYRMTKAAELLKLTELTIKDIGNAVGYPSQLHF 260

Query: 268 SKAFKHKFGYAPSAVLKNTD 287
           S+AFK  +G +P        
Sbjct: 261 SRAFKKTYGISPREWRSENK 280


>UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Tax=Bacteroides
           cellulosilyticus DSM 14838 RepID=UPI0001969580
          Length = 304

 Score =  216 bits (551), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 109/267 (40%), Gaps = 11/267 (4%)

Query: 28  SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGN 87
           + G  LI     Y    +   +    +K  I N +  +Y + G G  +  N +++ +H  
Sbjct: 25  TVGHQLIKPNSVYPSASHPFHYLFSPEKGRILNEYQLIYILDGKGTFVSMNKKKMQIHSG 84

Query: 88  CIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDI----PVGQQSVIYNGEIYNQELTE 142
            +I L P + HSY  +    W +YW+ F    +  +       + + I+N  +    + +
Sbjct: 85  HMILLFPGEWHSYKPDKETGWYEYWIGFNGQDIEKLVEVDFFRKDNPIFNIGLNENVI-Q 143

Query: 143 VAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP-----QRRQIEKLIATLHASL 197
           + +   +    +       L  I++  +   Y++ K++         QI      +  + 
Sbjct: 144 LYKQAANVAQEQTTGFQQILAGIVHLLLGYTYSEHKQNSFINMNVLDQINTAKHLIAENY 203

Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257
           +   +  D+A  I  S +  R++F +YTG +P  Y  + RL  +  LL     +  E+A 
Sbjct: 204 KTEITPKDIATKINMSYSCFRKVFKQYTGFSPSRYKEELRLQTSKELLANTTMTSQEIAF 263

Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            + F   ++F   FK + GY+P     
Sbjct: 264 EVGFDTPYYFCILFKKRTGYSPLEYRN 290


>UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=Bacillus
           cellulosilyticus DSM 2522 RepID=D2LQR6_BACS4
          Length = 302

 Score =  216 bits (551), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 101/267 (37%), Gaps = 14/267 (5%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
                  P     P+  N ++  Y ++G G +   +G+   +  N    + P +I  Y  
Sbjct: 29  CGLEECDPYHSYGPISRNEYLLHYVIKGKGILK-ADGKTYHIGENDAFLIYPSEITYYEA 87

Query: 103 E-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
           +    W   W+ F               +++ +   E     +  +  ++++ +   +N 
Sbjct: 88  DKDDPWTYIWIGFDGMKAESCLINASFSKENRVSKFECGETLVHYLNGMLSASKLTYSND 147

Query: 158 AV--AFLTKIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAAT 209
                +L   +   I     +    P+         +E  +  +  + +++  V D+A  
Sbjct: 148 LKREGYLYMFLSALIQEKTDNNSDKPEVYDYPFLVYVEHALDFISHNYEKQIKVIDIAEY 207

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
           I  + ++L  +F +    +P+EY +  RLD A +LLK     V E+A  + + ++  FSK
Sbjct: 208 IGINRSYLTTIFKKSLKVSPQEYLVKYRLDKACTLLKNTDLLVNEIARNVGYNNALTFSK 267

Query: 270 AFKHKFGYAPSAVLKNTDQHPTDASPH 296
            FK+ +  +P        +       H
Sbjct: 268 VFKNYYKMSPKTYRTQHQELVYSNKKH 294


>UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=unclassified
           Gammaproteobacteria (miscellaneous) RepID=B7RWJ7_9GAMM
          Length = 293

 Score =  216 bits (550), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 108/293 (36%), Gaps = 17/293 (5%)

Query: 5   LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64
           L  + V+  TP  +   +  + ++      ++ +  A   +R+   R        +  + 
Sbjct: 9   LPHAGVRFITPTFMLEKLARHPLTKDCYPTAMGYYPAASGHRMQRERH-------DDNLL 61

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----M 119
           +Y   G G++ + +     +    I+ L     H+Y  +    W  YW+ F   S    M
Sbjct: 62  LYCTSGRGQLTVGDWHS-QVTAGHIMLLPQGLAHTYEADGDDPWTLYWVHFQGASTRVFM 120

Query: 120 MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA----VAFLTKIIYQWICLMYA 175
             +   +   + N  +    +     L+       +  A       L  +I Q    + A
Sbjct: 121 QYLGYREDRPLTNAGVSPLLIGAFTNLLEVRRTGYSTRAFINASNHLRHLITQMSMEISA 180

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
              +     +++ + A +   + Q  ++  +A     S+      +   TG  P +++L+
Sbjct: 181 HAGRLQSGFELDHVQAYMLEHIDQTITLDALAQVANMSKYHFSNRYKTLTGYPPIKHFLN 240

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
            +++ A  LL      V E+A  + + D  +FS+ F    G +P     +T +
Sbjct: 241 MKMEHACHLLDSTDMGVSEIARGVGYDDPLYFSRLFSRTVGSSPRGYRSSTRK 293


>UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n=2
           Tax=Oceanospirillaceae RepID=Q2BQ54_9GAMM
          Length = 304

 Score =  216 bits (550), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 119/296 (40%), Gaps = 21/296 (7%)

Query: 2   NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61
           N  L    ++   P  +   +  + +S G+  + +        Y       + +    + 
Sbjct: 6   NWPLPPESIRFVIPRRVISELALHPLSQGLYPLGM-------GYYRQASGHQMERQEHDD 58

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMM 120
            + +Y + G G+ ++ +G++  +    I+ +     H+Y       W  YW+ F      
Sbjct: 59  NLLIYCLDGEGEAVI-DGQKTRIRSGDILLIPKGVSHTYQARKRKPWTIYWVHFHGHHAE 117

Query: 121 DIPVG-------QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM 173
           D           Q+  +    I+++  ++   L+ + E+  N  A       + Q +  +
Sbjct: 118 DFAQHLQQRESNQRRYVMPIGIHSRLASDFEALLEARESTYNLNAYICAANQLRQILSHI 177

Query: 174 -----YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
                 A  K+      IE++ + +   + ++  +  +A +I  S+    + +   TG T
Sbjct: 178 ALLQPLAKQKQSRGGLDIERVHSLMQTHIHEQLDLDTLAESISLSKYHFVKKYKEVTGTT 237

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           P  +++  +++ A  LL    N + EVA  + + D+++FS+ FK   G +PS   K
Sbjct: 238 PINHFIQLKIERACHLLDTTNNGINEVAFAVGYEDAYYFSRIFKKLMGVSPSQYRK 293


>UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271
           RepID=C4FUL3_9FIRM
          Length = 277

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 99/279 (35%), Gaps = 18/279 (6%)

Query: 20  LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKI-LLKN 78
             +  N+ S  +  I               P     P + ++++  Y + G G     + 
Sbjct: 6   FYVFHNISSVDLYPIQFGK-------EKCDPWHHYGPTLTHNYLFHYILSGRGSFLENER 58

Query: 79  GEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIY-- 131
            E I L       + P  + SY  +    W   W+EF      +      +   ++I+  
Sbjct: 59  HEAIQLGPGQGFLMPPNTVCSYTADQDDPWTYCWIEFNGLKAANFMRQAGLNANNLIFTP 118

Query: 132 NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP---QRRQIEK 188
           +  +    + +  E I    +   +  +A L  ++   I       ++ P       I +
Sbjct: 119 HKPMIISSIKDTLETIIRNHSQHESFLIAQLYLLVDHLIRFSKHSPQQRPNEIHSFYIRE 178

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
            I  +        SV  +A     +  +  RLF +    TP ++ L  R++ +  LL   
Sbjct: 179 AIHYIQDHYMDNPSVDQLADICHLNRNYFTRLFKQELHMTPSQFILTYRINQSCELLAST 238

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
             S+ ++AD + + + F+FS AFK   G  P    +   
Sbjct: 239 NRSIRDIADQIGYSNQFNFSSAFKRVKGMTPMEWRRRYR 277


>UniRef50_A4XS27 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas
           mendocina ymp RepID=A4XS27_PSEMY
          Length = 293

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 57/292 (19%), Positives = 109/292 (37%), Gaps = 14/292 (4%)

Query: 2   NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61
           N  L     +  TP  +  L+  + +SSG   +++                + + L  + 
Sbjct: 9   NWPLPLGGQRFITPPRLRRLLVRHPLSSGCYPLAMGFYPDAAG-------HQMRRLQPDD 61

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM 120
            + +Y   G G +   +G    +    ++ L     H+Y  +G   W  YW+ F  +   
Sbjct: 62  HLLIYCRSGRGWLDATDGR-FEVAAGDLLLLPKDVPHAYGADGHSPWTIYWVHFDGSLSE 120

Query: 121 DIP-VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL----AVAFLTKIIYQWICLMYA 175
           D   +     +    +  + L +   L+       N L    A   L  ++     L   
Sbjct: 121 DFLRLLGAQTLRRIGVQPRLLGDFEALLGLQRQGLNALPFIHAAHRLQAMLSSLAVLPAR 180

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
              K  +   IE + A + A L    ++ ++AA    S     + +   TG  P + ++ 
Sbjct: 181 VSLKSGRVLDIEAVQAVMRAHLHGNLNLDELAAQFKLSRFHFAKTYRALTGHAPIQDFIQ 240

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
            ++ LA  LL +    V +VA+ L + D ++FS+ F+   G APS       
Sbjct: 241 LKMALACRLLDRGDIEVRQVAEQLGYEDPYYFSRLFRKVVGMAPSHYRALHQ 292


>UniRef50_B5JKR3 Transcriptional regulator, AraC family protein n=2 Tax=Bacteria
           RepID=B5JKR3_9BACT
          Length = 301

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 110/297 (37%), Gaps = 12/297 (4%)

Query: 8   SDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYT 67
               ++T   +P+     +           +     HY        K+     + + +Y 
Sbjct: 6   EGFPSQTLVRMPVETVSCLQQLPFCRSL--YAADIGHYPEARNHLVKRDQGCPNHILIYC 63

Query: 68  VQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPV-- 124
           + G G   L   ++I +     I +     H+Y   EG  W  YW+ F+ T    +    
Sbjct: 64  IGGQGWYSLNGEKRIPVQAGQAILIPAKSPHAYGSTEGQSWRLYWIHFSGTEADGLFNFL 123

Query: 125 --GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ 182
              + + +     +   +T   + I   +   +   +        + + ++    + +  
Sbjct: 124 SDERTNALIYLPHHASIITAFEDAIRWTQREHSKSVLHAFAGSCSRLLGIIAEGKRPNSS 183

Query: 183 R-----RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
           R      ++   I  +  +L+   S+  +A+    S      LF + T  +P + Y   R
Sbjct: 184 RARFVEERVRSTITRMRETLRSPLSLEQLASEACLSVPHYSALFKKQTSSSPIQMYSQMR 243

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294
           + LA  LL      + EVA+T  + D+++FS+AFK   G  PSA   + D+   D S
Sbjct: 244 IQLACELLHNTDLGIKEVAETAGYEDAYYFSRAFKKVMGCPPSAYRNSLDKRQRDPS 300


>UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=Halothermothrix
           orenii H 168 RepID=B8D1C2_HALOH
          Length = 276

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 96/258 (37%), Gaps = 12/258 (4%)

Query: 40  YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99
                     P     P + + ++  +   G G   +       L       + P  +  
Sbjct: 20  IYQCGQEKCKPGHSYGPAVRDHYLIHFIYNGRGIFQVGEN-TYHLEAGQGFLICPDIVTY 78

Query: 100 YHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE---LTEVAELITSPEAIKN 155
           Y  +    WE  W+ F      D        + N    + +   L  + E +T+   +K 
Sbjct: 79  YQADRHNPWEYAWIGFHGLKAKDYLNRANLSLANPVFSDTDGSPLRFIFEEMTAARKLKR 138

Query: 156 NL---AVAFLTKIIYQWICLMYADGK--KDPQRRQIEKLIATLHASLQQRWSVADMAATI 210
           +     +  +   +   I L  +      + +   I+K I  +  +  +   V D+A  +
Sbjct: 139 SREIKLIGLIYVFLSHLIELNVSGSTPDNNSKENYIKKAIEYIEKNYSRHIKVIDIANHV 198

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ--GNSVGEVADTLNFFDSFHFS 268
               ++L  +F  +   +P++Y ++ R++ A  L+K +    S+G+++ ++ + D   FS
Sbjct: 199 GLDRSYLWSIFNEFLNTSPQQYLINYRINKACELMKNRNLNLSIGDISRSVGYKDPLTFS 258

Query: 269 KAFKHKFGYAPSAVLKNT 286
           K FK   G +P    K +
Sbjct: 259 KTFKKTKGISPLHYQKQS 276


>UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostridiales
           RepID=C0BFD5_9FIRM
          Length = 305

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 98/257 (38%), Gaps = 14/257 (5%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             +    P     P    +++  Y ++G G   +    +  L       ++P  +  Y  
Sbjct: 22  CGFAECKPLHSYGPAARPNYILHYVMKGKGIYQVGE-TKYPLKEGQAFLIEPESLTFYQA 80

Query: 103 EG-LVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
           +    W   W+ F  T       D+ +  + +    E   +    V E++    +   NL
Sbjct: 81  DKTDPWSYLWVGFGGTEAQRFVRDLGLNSRQLTCECEYGEELKEIVFEMLHHTCSTAENL 140

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATIP 211
              +L   +YQ+  ++    +             +++ IA +     Q+ +V D+A  + 
Sbjct: 141 Y--YLQGKLYQFFSVLARGIEIQQYSNDTKESIHVQEAIAYIKNYYSQKITVEDIANYLA 198

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
            + ++L  +F+   G +PKE+  + R+      L     SV E+A +  + +S  F K F
Sbjct: 199 LNRSYLYTIFMNSLGISPKEFLTEFRISRGKEQLALTDLSVEEIAVSCGYRNSLAFGKVF 258

Query: 272 KHKFGYAPSAVLKNTDQ 288
           K K G  P+    +  +
Sbjct: 259 KQKMGMTPTQYRNDNRK 275


>UniRef50_C6XV52 Helix-turn-helix-domain containing protein AraC type n=1
           Tax=Pedobacter heparinus DSM 2366 RepID=C6XV52_PEDHD
          Length = 298

 Score =  215 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 114/300 (38%), Gaps = 17/300 (5%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           MN +        +    +P    + V  +   LI   +  A  +Y      D+++   + 
Sbjct: 5   MNVRKIKEGFLGQQMIVLPPDTKKVVTKNP--LIRGLYLTAIGYYPKAIHHDRERKTGSQ 62

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFTPTSM 119
            ++ +Y  +G G + +   ++  L  N  I +     H Y   E   W  YW+ FT    
Sbjct: 63  QYIFLYCTEGRGYVEIL-KQRFELVPNTYIIIPKNIAHHYCTSESDPWTIYWIHFTGEHA 121

Query: 120 MDIP-------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL 172
             +          +   I   E   ++   +  L+ +  + +N          + Q++  
Sbjct: 122 DQLYSRYAKDTAPEVQTIAYDEQRTEQFNLMLSLLENNYSTRNIELTNI---KLLQFLSS 178

Query: 173 MYADGKKDPQRRQIEKL---IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229
                +  P    ++++   I  +  +L + +++ ++AA    S +    LF + TG +P
Sbjct: 179 FIYHEEMYPSHYSVDQVSISIKFMKENLTKCYAIQELAAHSNYSVSHYSDLFKKKTGCSP 238

Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
            +Y+   ++  +   L     ++ E+   + F D ++FS+ FK   G +P+       + 
Sbjct: 239 MQYFNQLKIQKSCQYLYFTDMNIKEICVKIGFDDPYYFSRMFKKLMGSSPANYRNIYKKK 298


>UniRef50_C6XZD9 AraC protein arabinose-binding/dimerisation n=1 Tax=Pedobacter
           heparinus DSM 2366 RepID=C6XZD9_PEDHD
          Length = 294

 Score =  215 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 59/274 (21%), Positives = 116/274 (42%), Gaps = 10/274 (3%)

Query: 25  NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84
           +V+++G + IS    Y    +      +  K  I + +  +Y  +G G     + +Q+ +
Sbjct: 20  HVLNAGYNRISKAANYPPAGHPSGHYFNWDKGRILDEYQLIYISKGTGIFESAHCKQLHI 79

Query: 85  HGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYNGEI---YNQEL 140
           +   +I L P + H +  +    W++YW+ F    + +I        +   +    + +L
Sbjct: 80  NEGAVILLFPGEWHRFKPDPETGWDEYWVGFKGDIISNIAKKNFISPHLPLLQVGLSDQL 139

Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD------GKKDPQRRQIEKLIATLH 194
            ++   I      +       ++ +I   +  +YA        K+D     I K    L 
Sbjct: 140 IDLFSAILEKTKTEQPGYQPLISGMILHLLGEVYAKTKLQALEKEDISEILINKARILLR 199

Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254
            S+    ++  +A  +  S +W R+ F  +TG  P +Y L  +++ A +LL      + E
Sbjct: 200 ESVHTNIAIEKLAEELHVSYSWFRKAFKTFTGIAPHQYLLQLKIEKAKTLLSDSTKPIKE 259

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           +A  L F  SF+FS+ FK+K  YAP    K   +
Sbjct: 260 IAFELGFESSFYFSRIFKNKTSYAPDTYRKLVRK 293


>UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=Clostridium
           RepID=Q0SVP8_CLOPS
          Length = 284

 Score =  215 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 99/255 (38%), Gaps = 15/255 (5%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
                  P     P + N+++  Y + G G   + NG+   L  N    + P  +  Y  
Sbjct: 30  CGMEKCLPSHSYGPAVRNNYLIHYIIDGEGTYYV-NGQSYRLRKNQGFLICPNTLTYYKA 88

Query: 103 EGL-VWEQYWMEFTPTSMMDIP----VGQQSVIYNG------EIYNQELTEVAELITSPE 151
                W   W+ F             + + ++I+        EIY   + E+  +  S E
Sbjct: 89  SKDNPWTYMWIAFNGIKAKKYLNYANLNEDNLIFEYTEDDSLEIYINRMFELNRMNYSNE 148

Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQR-WSVADMAATI 210
                L   FL+K+         +    +     +EK I  +  +       + D+A  +
Sbjct: 149 LEIQGLLYLFLSKLAMS--KNENSLKSNNISDFYVEKAIEFMQNNYLNPDLKITDVANFV 206

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             + ++L  LF +    +P+E+ L+ R++ A SLLK    SVG ++ ++ + D   FSK 
Sbjct: 207 GLNRSYLTHLFKKSLKLSPQEFLLNYRINEATSLLKNTNLSVGTISKSIGYNDQLTFSKV 266

Query: 271 FKHKFGYAPSAVLKN 285
           FK   G +P     N
Sbjct: 267 FKKVKGISPKTYRDN 281


>UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CVH4_PAESJ
          Length = 287

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 107/261 (40%), Gaps = 16/261 (6%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-G 104
               P  ++ P + + ++    ++G G+     G+   L       ++P  + SY     
Sbjct: 28  SQTKPSHQRGPKVYDFYLMHTVLEGKGEFTCG-GKSYPLQAGDTFLIEPEALVSYISNAD 86

Query: 105 LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTE-------VAELITSPEAIKNNL 157
             W   W+ F      ++       + N       +         +  +    +   +  
Sbjct: 87  EPWLYRWVAFNGPQAAELAQAAGFSVANPVAETAAIRRVGVLYNHIFSIFRKNDPAAHLK 146

Query: 158 AVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLHASLQQRWSVADMAATIP 211
           A  +L  ++ ++  +             D   + I+++I  L     Q  S+  MA +  
Sbjct: 147 AAGYLQLLLAEFCTVHKLSEDNAAMTNMDDTDKLIQQMIHYLSTQYAQPVSIEQMAESFG 206

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG-NSVGEVADTLNFFDSFHFSKA 270
            + A+L R+F RYTG++P  + L  R+D A  +++++   ++ ++A ++   DS +FSK 
Sbjct: 207 YNRAYLSRVFKRYTGESPITFLLKLRIDKARQMIREREGLTIEQIAASVGLQDSLYFSKQ 266

Query: 271 FKHKFGYAPSAVLKNTDQHPT 291
           F+  +G +PSA  ++  Q  T
Sbjct: 267 FRRFYGLSPSAYRESMRQMKT 287


>UniRef50_B3C7N6 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis
           DSM 17393 RepID=B3C7N6_9BACE
          Length = 292

 Score =  214 bits (545), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 65/295 (22%), Positives = 122/295 (41%), Gaps = 21/295 (7%)

Query: 7   SSDVKNE----TPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW 62
           +   K E    TPYNI  L  EN I+  + +  + +      Y       +++    N  
Sbjct: 5   AEGFKGEKAIVTPYNIRNLQRENNITKQLFVSHIGY------YPHAENHFREREKGTNEN 58

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPT--SM 119
           V +Y   GCG +  K GE+  L  N    L   + H+Y  +    W  YW+ F     +M
Sbjct: 59  VFIYCESGCGWVSYK-GEKYILTKNQAFILPANEQHAYGADEVNPWSIYWLHFCGEGVAM 117

Query: 120 MDIPVGQQSVIYNGE--IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM---- 173
               +G+   +   +   Y+       E+  + E   +   + +++  +  ++  +    
Sbjct: 118 FSSIIGKAISLEESDKSRYDDRFQLFEEMYQNLEMGYSPENLEYVSFCLMHFLASLKYIN 177

Query: 174 -YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232
            + + KK  +   I+K I+ +  +++ + ++ D+A  +  S +    LF   T   P EY
Sbjct: 178 QFREIKKVRETDFIQKSISFMKENMENKITLEDIAQHVGYSASHFSALFSERTSYAPMEY 237

Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           Y   ++  A S L+     + E+A  L ++D FHFSKAF  +    P    +   
Sbjct: 238 YNQLKIQRACSFLQFSDLKIKEIAFRLGYYDQFHFSKAFNKEMEITPKEYRRRYK 292


>UniRef50_C6IJ00 Transcriptional regulator n=2 Tax=Bacteroides RepID=C6IJ00_9BACE
          Length = 293

 Score =  214 bits (545), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 109/274 (39%), Gaps = 9/274 (3%)

Query: 23  NENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82
           + N+ S G   I    +Y   ++   +  +  K  I   +  +Y  +G G +  ++G   
Sbjct: 18  DRNISSVGFEEIPPNTSYPTLNHSAGYYFNPDKGRILTEYQLIYITEGEGVLETRSGGVF 77

Query: 83  TLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYN 137
           T+    I  L P + H+Y+      W  YW+ F    +     +    ++S ++   I +
Sbjct: 78  TIKRGMIFVLFPGEWHTYYPNYQTGWSHYWIGFCGPEVDSWMTNEYCSKESPVFKVGIND 137

Query: 138 QELTEVAELIT--SPEAIKNNLAVAFLTKIIYQWICLMYAD--GKKDPQRRQIEKLIATL 193
           + ++   + I   + E       ++ L   +   +C +  +   + D    +I+     +
Sbjct: 138 EIVSLFRKAIDVANEEPTLYQRVLSGLVTYLVALMCSIDKNLQVENDDFSSKIDYACVLM 197

Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253
              + Q  S+ ++A       +  R+LF       P +Y+ + ++  A+ LL      V 
Sbjct: 198 KELIDQPVSMQEIAKKAGMGYSLFRKLFKEQKNYAPVQYFQNLKIQKAIELLTTTTIPVK 257

Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           E+A  L+F    +FS  FK + G +P    +   
Sbjct: 258 EIAYRLDFESPAYFSARFKKQTGKSPIEYREEFR 291


>UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=Pediococcus
           pentosaceus ATCC 25745 RepID=Q03FA9_PEDPA
          Length = 298

 Score =  213 bits (544), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 119/295 (40%), Gaps = 17/295 (5%)

Query: 9   DVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTV 68
             +NE  + +P +I  N   +   +I L +      Y         +      W+ ++  
Sbjct: 6   GFENEYLFVLPPVILNNF--NFSKVIKLLYITDLGFYPKARYHFVHRDRGTEEWILIFCT 63

Query: 69  QGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDI----- 122
            G G +     E+  +    I+ L P   H+Y+  +   W+ +W  F   S+ +      
Sbjct: 64  HGKGVVKSAT-EEWLIESGSIVLLPPGKEHTYYAFDDDPWDIFWAHFNGDSVNEYIPQEA 122

Query: 123 PVGQQSVIYN---GEIYNQELTEVAELITSPEAIKNNLAVAFLTKII-----YQWICLMY 174
             G   ++ N    E     +++  ++I +  A  +  +V + ++++     Y  +  + 
Sbjct: 123 LQGNGFLVINKTSTEDMQMLMSQFWQMIQALSAGFSYQSVFYSSQVLGATLAYVSLQSVL 182

Query: 175 ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
                      I K +  ++   +++ S++ +   +  S+++L R+F +  G +  ++ L
Sbjct: 183 PHDSYTMGNEYITKAVKYIYDHFEEKVSLSTLTEVLDVSKSYLSRIFRQTVGTSVNQFIL 242

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
           D ++  A   LK    +V ++A  L + D ++FS+ FK   G +P    K     
Sbjct: 243 DIKMKQACYYLKDTNLAVHQIASRLGYDDPYYFSRIFKKVVGSSPRVFRKQEKNR 297


>UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridium butyricum E4 str.
           BoNT E BL5262 RepID=C4IHE3_CLOBU
          Length = 285

 Score =  213 bits (543), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 105/254 (41%), Gaps = 12/254 (4%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101
                   P     P I + ++  Y ++G G  L+ NG+   LH N    + P DI  Y 
Sbjct: 24  QCGREECTPSHSFGPAIRDHFLIHYIIEGSGTFLV-NGKLYKLHKNQGFIIFPDDITYYE 82

Query: 102 CEGL-VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIK-- 154
            +    W   W+ F             + +++ I+     ++ L E  + +     +K  
Sbjct: 83  ADNHTPWIYKWVGFKGIKAEYYLQCAGLTKENPIFEYS-NDKFLEECFDNMIKASKLKYA 141

Query: 155 -NNLAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKLIATLHASLQQRWSVADMAATIP 211
                   L+  + + I L   D   D   +   I+K +  +  +  ++  ++++AA + 
Sbjct: 142 SELKLQGLLSIFLSELIELSSIDSSSDYYYKDVYIKKCLNYIEMNYSRKLLISEIAALLG 201

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
            +  +   +F    G TP++Y +  R++ A  L+K    S+ +++ ++ + DS  FSK F
Sbjct: 202 LNTKYFSLIFKESIGVTPQQYIISFRVNKACELMKNFKLSICDISRSVGYDDSLAFSKIF 261

Query: 272 KHKFGYAPSAVLKN 285
           K + G +P    + 
Sbjct: 262 KKQKGMSPKKYREQ 275


>UniRef50_C7PUR1 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga
           pinensis DSM 2588 RepID=C7PUR1_CHIPD
          Length = 301

 Score =  213 bits (543), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 110/292 (37%), Gaps = 12/292 (4%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
           +    + +    +P  I+ + ++       L+ T    +Y        K+P   +  + +
Sbjct: 8   KREGFEGQQLIVVPRKISADFLTQDPITRQLYIT-DIGYYPKARYHYIKRPSGISQHIII 66

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTS----MM 120
           Y ++G G I + + +++ +  +  + +     H Y  E    W  YW+ F        + 
Sbjct: 67  YCIEGKGWIEI-DKKRVDVLPSQFVIIPANTPHKYLSEEQEPWTIYWIHFKGEISAYIVG 125

Query: 121 DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK-- 178
            I    ++   +       +    ++  + +    +  + ++  I   ++  +  + K  
Sbjct: 126 LILQRAKNFRLHLTYNENRIRLFEDICINLQKGYGDDNLRYVNMIFNHFLSSLLYEEKFN 185

Query: 179 ---KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
              ++ ++  I + I  +   L Q  ++ + +     S +    +F   TG +P EY+  
Sbjct: 186 HAGQEERQDIIGQTITMMQEKLDQLITLQEFSQYAGLSVSHFSAVFREKTGYSPIEYFNH 245

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
            ++  A   L     +V E+A  L   D ++FS+ F    G +PS       
Sbjct: 246 LKIQKACQYLLFSAATVKEIAVRLGVEDPYYFSRMFSKLMGMSPSEYRNRNK 297


>UniRef50_A6EEZ9 Transcriptional regulator n=1 Tax=Pedobacter sp. BAL39
           RepID=A6EEZ9_9SPHI
          Length = 306

 Score =  213 bits (542), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 114/269 (42%), Gaps = 9/269 (3%)

Query: 25  NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84
           N+++ G ++      Y D H+  ++  D  K  I   +  +Y  +G G    +    + +
Sbjct: 26  NILNVGHNIHPGKLKYPDPHHPNLYCFDWSKGRILEEYQLIYIAKGSGTFESEQVGSVVV 85

Query: 85  HGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM-----MDIPVGQQSVIYNG--EIY 136
           H   ++ L P   H Y   +   WE+YW+ F  +        D       +I+ G    +
Sbjct: 86  HPGTVLLLFPNIWHRYKPHDDEGWEEYWVGFNGSYASYLMQQDCFDPHAPLIHMGFNSEF 145

Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKII-YQWICLMYADGKKDPQRRQIEKLIATLHA 195
                 + + +         L+ +  T+++   +   +  +   D + + I  +   +H 
Sbjct: 146 INVFIRLIDTLKFEGVAFAQLSSSLTTQLLGLVYASALQKEKVMDRKEQVINNIRYKIHE 205

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
           +L    ++ ++A+    S AW R+ F    G +P +Y L+ +L+ A  ++++   S+ E+
Sbjct: 206 NLSNCATLEELASQHNVSYAWFRKTFKEVVGVSPGQYQLNLKLEKAARMIRETQMSISEI 265

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           A    F    HFSK FK K G +PSA   
Sbjct: 266 AFVNGFVSEHHFSKIFKKKMGVSPSAYKH 294


>UniRef50_C6VZN4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter
           fermentans DSM 18053 RepID=C6VZN4_DYAFD
          Length = 292

 Score =  213 bits (542), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 9/270 (3%)

Query: 25  NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84
            + ++G S +     Y +E +         +  I N +  ++  +G G    +N     +
Sbjct: 21  YLTTAGYSKVEPNQQYPNEPHPDSHKLTWNRGRILNDYYIIFITRGKGIFEAENLPPTEV 80

Query: 85  HGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSV-------IYNGEIY 136
                 FL P   H Y  +    WE+YW+ F    +  +              I + +  
Sbjct: 81  SAGQCFFLFPGVWHRYKPDVKSGWEEYWLGFNGYYIRQLMNNLNFHPARPFVDIKSNKEI 140

Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC-LMYADGKKDPQRRQIEKLIATLHA 195
              L  + + + +     +        +I+        + D   DP  R I K    L  
Sbjct: 141 LVLLHRIFDRLKAANLGYHQQIAGITLQILGILNTISKFKDYDNDPVGRLIAKAEFILQE 200

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
           S +++  V ++A+ +P   +  R+ F + TG +P +Y+L+ RL  A  LL     ++ E+
Sbjct: 201 SYEKQVDVEELASQLPMGYSAFRKAFKKITGVSPNQYHLNLRLSRARDLLINTNLNISEI 260

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
                F   F+FSK FK K G +P A  + 
Sbjct: 261 THQTGFESVFYFSKLFKKKNGLSPVAFRRR 290


>UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales RepID=A6LBM0_PARD8
          Length = 295

 Score =  213 bits (542), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 11/272 (4%)

Query: 26  VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85
           V + G   I     Y    +   +    +   I N +  VY  +G G    ++ +   ++
Sbjct: 25  VTTVGYQFIPPGCAYPLSRHPEKYNFKPQTGRILNEYQLVYITKGSGYFSSQSCKSQKIN 84

Query: 86  GNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQEL 140
              +I L P + HSY+ +    W++YW+ F        +      ++  ++   + +  +
Sbjct: 85  AGTMILLFPGEWHSYYPDRETGWDEYWVGFRGIHIDKRVEKKFFTKEEPLHRIGL-SATI 143

Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR-----RQIEKLIATLHA 195
             + E I    + + +     ++ I+   +  +Y   K +         +I +    +  
Sbjct: 144 VGLYEDILKFASEEKSGYQQMISSIVLHILGSVYYKEKNNSFTNTYVVDKINEARILMKE 203

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
           +++   S  ++AA +    +W RR+F  YTG +P +Y L  +L  A  LL     ++ E+
Sbjct: 204 NIEDPLSPEEIAARLGLGYSWFRRMFKEYTGVSPAQYQLQQKLLRAKELLTSTPLTISEI 263

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           A +L+F ++  FS  FK K G  PS     T 
Sbjct: 264 AYSLHFENAGQFSTFFKKKEGVTPSEFRDRTH 295


>UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           beijerinckii NCIMB 8052 RepID=A6M1S5_CLOB8
          Length = 286

 Score =  212 bits (541), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 99/259 (38%), Gaps = 17/259 (6%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILL------KNGEQITLHGNCIIFLKPMDIHS 99
               P     P + N ++  Y + G G++         +    T+       L P  I++
Sbjct: 25  ERCDPLHSFGPTVKNHFLFHYVLSGKGRLYSFNKGTQNDSSIYTIKAGEGFLLTPNIINT 84

Query: 100 YHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAE---LITSPE 151
           Y  +    W   W+EF        + +I +  +++I+  + YN +   + +    + +  
Sbjct: 85  YEADKDDPWNYVWVEFEGLKAQRYLEEIGLSSKNLIFTPKEYNNDDNSIKDNLMFLLNNP 144

Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR---QIEKLIATLHASLQQRWSVADMAA 208
           +  ++  +  L    Y  +     +  K         + + I  +  +     SV ++A 
Sbjct: 145 SAPDSAILGHLYLFFYALLENSSFNNTKSASNLQEFYVREAINYIEKNYNNNISVENIAK 204

Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268
                 ++  ++F      TP+E+ +  RL  A  +LK    S+ E+++   + + FHFS
Sbjct: 205 WCNLDRSYFGKIFKNSMKTTPQEFLIKYRLSKACEMLKDNNISIREISELTGYPNQFHFS 264

Query: 269 KAFKHKFGYAPSAVLKNTD 287
           ++FK  +  +P        
Sbjct: 265 RSFKEVYNMSPRQWRNQNK 283


>UniRef50_UPI0001C34C27 transcriptional regulator, AraC family protein n=1 Tax=Clostridium
           sp. M62/1 RepID=UPI0001C34C27
          Length = 262

 Score =  212 bits (540), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 102/252 (40%), Gaps = 13/252 (5%)

Query: 40  YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99
             D  +    P     P     W+  Y +QG G      G++  +    +  ++P ++  
Sbjct: 17  PVDCGWEACAPGHSFGPAARFYWLLHYVIQGRGAF-TAEGKESPVRAGQMFVIRPFEVTY 75

Query: 100 YHCEG-LVWEQYWMEFT-PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
           Y  +    WE  W+ FT    + +  + +   + N        + + E     +      
Sbjct: 76  YEADRREPWEYIWIGFTCGIPLPECLLQE--AVVNASRCGSIFSSMLEAENQTDG----- 128

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
              FL    +Q +  +  + K       +E+    L A+  +  S+ ++A  +  + ++ 
Sbjct: 129 RELFLCGKAFQLLAAL--EEKPAGGEDYVEQARTYLEANYMRDVSIGELAGKLNLNRSYF 186

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
             LF + TGK+P++Y  D R+  A  L+ + G S G+ A +  + D F FS+ FK  FG 
Sbjct: 187 STLFRKKTGKSPQQYLTDYRMGRACQLMTEHGYSPGKAALSTGYPDIFSFSRMFKKHFGV 246

Query: 278 APSAV-LKNTDQ 288
            P     + T++
Sbjct: 247 FPREYSRRQTEK 258


>UniRef50_D1QQ68 Transcriptional regulator n=1 Tax=Prevotella oris F0302
           RepID=D1QQ68_9BACT
          Length = 291

 Score =  212 bits (540), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 57/273 (20%), Positives = 101/273 (36%), Gaps = 12/273 (4%)

Query: 26  VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85
           V + G   I     Y    +   +    ++  I N +  +Y   G G     + E+  + 
Sbjct: 20  VSTVGYEHIIPGEDYPTHGHADGYYFKVERGRILNEYQLLYITAGEGVFKSSSVEERRIK 79

Query: 86  GNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQEL 140
                 L P + H+YH      W+ YW+ F   +M     +  +     +Y+   Y   L
Sbjct: 80  AGDFFLLFPGEWHTYHPSKNIGWQSYWIGFKGENMDARVKNGFLSPTKPVYHVG-YMDRL 138

Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMY------ADGKKDPQRRQIEKLIATLH 194
            ++          +       L  ++   I +MY        GK       + +    + 
Sbjct: 139 EDLYHYALDTAQEEAVHTQRTLAGVVNLLIGMMYSLERNIELGKNQEHVNMVNRARKRIR 198

Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254
            +L++  ++  +A  +  S +  R+LF  +TG +P  Y  + RL  A  LL     SV +
Sbjct: 199 EALEENLTIQQIATDMGVSYSNFRKLFKEFTGVSPALYQQELRLQRAKELLSTTNLSVKQ 258

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +A  L F    +FS  FK K    PS   + T 
Sbjct: 259 IAYKLCFDSPDYFSAKFKAKINLRPSEFREQTK 291


>UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956
           RepID=B2GEN0_LACF3
          Length = 278

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 15/255 (5%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
                 P  K  P +   ++  Y + G G   + N     LH      + P    +Y  +
Sbjct: 23  GRSETMPGHKYGPAVRPYYLIHYILSGSGIFKVDNV-TYHLHAGQGFLIVPNCRTTYIAD 81

Query: 104 GL-VWEQYWMEFTPTSM----MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158
               W   W+ FT  S       I + +   ++N     +    V E++        N  
Sbjct: 82  KETPWSYVWLGFTGKSAATWIDQINISEIRPVFNSNKSYELANCVNEILALDNLSMENNL 141

Query: 159 VAFLTKIIYQWICLMYA------DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
            A      ++++  +              +   + + I  +   L +  +V  +A  +  
Sbjct: 142 RAL--SCFFRFLSYIATGTVINIQQANSEKNHYVTQAIQYISHHLSK-VTVESLAHAVNL 198

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           + ++L  LF      TP EY  + R+  A  LL+    S+ +VA+   +  +  F++ FK
Sbjct: 199 NRSYLTSLFKHDLDLTPSEYIQNFRITKARHLLESSDISIDQVAEQCGYQRTNSFTRVFK 258

Query: 273 HKFGYAPSAVLKNTD 287
             +G +P    + T 
Sbjct: 259 RTYGISPRQYRQETK 273


>UniRef50_P28809 MmsAB operon regulatory protein n=6 Tax=Pseudomonas aeruginosa
           RepID=MMSR_PSEAE
          Length = 307

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 109/296 (36%), Gaps = 14/296 (4%)

Query: 5   LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64
           L +  ++   P  +   +  + +S  +      +  +  HYR      +      +  + 
Sbjct: 19  LPADSLRLPIPAALLEKLAVHPLSRDL------YPTSLGHYRRARD-HRMSRERHDEHLL 71

Query: 65  VYTVQGCGKILLKNGE---QITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMM 120
           +Y  +G G + ++ GE   +  +    +++L P   H Y  +    W  +W      S  
Sbjct: 72  IYCSEGQGLLRVREGEAWREYRVGSGDLLWLPPGMAHDYAADDRQPWTIFWTHLRGDSAT 131

Query: 121 DIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177
            +      + + + +  + +  L    +L+    +             +   +C +    
Sbjct: 132 WLQHSAGYRDTPLRHWGLQHALLGGFEQLLEVRHSGYRFQHFLLAASRLRSLLCQLPLLR 191

Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
                   ++ L A +   L  R  +  +AA    S+      +   TG+TP +++L  +
Sbjct: 192 PLREGSLDLDGLHAYMREHLHARLELERLAAFCNLSKFHFVSRYKAITGRTPIQHFLHLK 251

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDA 293
           ++ A  LL     SV  V   + + DS++FS+ F    G +PSA  +   Q    A
Sbjct: 252 IEYACQLLDSSDQSVARVGQAVGYDDSYYFSRLFSKVMGLSPSAYRQRVRQGEGGA 307


>UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0P929_9FIRM
          Length = 279

 Score =  211 bits (538), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 90/250 (36%), Gaps = 9/250 (3%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104
           +   P     P + + ++  + + G G     +G    +       + P  + +Y  +  
Sbjct: 28  QRCEPLYAWGPGLRDHFLVHHVIVGRGVYT-ADGVTHDVKAGDTFIIYPSVVVTYSADAA 86

Query: 105 LVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSP--EAIKNNLA 158
             WE  W+ F            P  +Q  +   E  ++    +A++  +          A
Sbjct: 87  DPWEYCWVGFNGAEARLMIAQTPFTRQRPVVRFEQPDEIREAIADIYRASGTTRSSELRA 146

Query: 159 VAFLTKIIYQWICLMYADGKKDP-QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
           +  L   +   I    A           +E  I  +  +      +  +AA++  S + L
Sbjct: 147 IGMLYIFLALLIEQAGAPAPAAGLSLEYVESAIRFIAHNYSGHIDIEAVAASVGISRSHL 206

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
            R+F+++    P EY    R+  A  LL      V  VA ++ + D  +FS+ FK   G 
Sbjct: 207 YRVFMQHISTPPNEYLAKFRISQACELLGHSSLPVSAVAASVGYDDPLYFSRVFKRITGM 266

Query: 278 APSAVLKNTD 287
            PSA +K   
Sbjct: 267 PPSAYIKAHQ 276


>UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptococcus
           RepID=C5VY46_STRSE
          Length = 278

 Score =  211 bits (538), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 94/262 (35%), Gaps = 13/262 (4%)

Query: 38  HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL-LKNGEQITLHGNCIIFLKPMD 96
                       P     P +   ++  Y + G G      +  +  L       + P  
Sbjct: 18  FYPIQFGMEACKPLHSFGPTMKQHYLFHYIISGSGTFYDTSDQREYHLTAGQGFLISPDA 77

Query: 97  IHSYHCE-GLVWEQYWMEFTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAE 145
           I SY  +    W   W+EF                  P+  Q  +        E+ ++  
Sbjct: 78  ICSYEADEKDPWTYIWLEFDGLKTEHFLRQAGLSKEQPIFSQREMPTSSPVYHEMKQILA 137

Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVAD 205
           L     A+       F++ +I   +    +   ++ +   I + I  +  + ++  SV D
Sbjct: 138 LHHQKSALVLGHLYLFISCLIDCSLTKTSSKHDENKE-FYIREAINFVERNYEKAISVDD 196

Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265
           +A     +  +  RLF      +P+++ +  RL  A  LLK    ++ E+A+ + + + F
Sbjct: 197 LAQVCNLNRHYFSRLFKEQMNISPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSNQF 256

Query: 266 HFSKAFKHKFGYAPSAVLKNTD 287
           +FS AFK  +  +P+   K   
Sbjct: 257 NFSTAFKRHYQISPNRWRKIHK 278


>UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
           29149 RepID=A7B7P4_RUMGN
          Length = 253

 Score =  210 bits (536), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 100/254 (39%), Gaps = 14/254 (5%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104
            +   P     P + N ++    ++G G       E+  +       + P  +  Y  + 
Sbjct: 1   MQDCPPSYSFGPAVRNCYLLHLCLEGEGVFYSGE-ERYPIKQGQGFLIHPGKLTFYQADS 59

Query: 105 -LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159
              W   W+               +  ++ I++    +   + + +++        N   
Sbjct: 60  VNPWSYLWVGIGGHDAEKYLRLAGLSARNPIFSCTQIDTAKSYILDMMKHHALSAAN--E 117

Query: 160 AFLTKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
            ++  I+ Q++ L+  D       +++     I + I+ +H + Q   +V ++A  +  +
Sbjct: 118 IYIQGILMQFLALLVEDAGCTVSPQQNTSSVYINQAISYIHKNYQNPLTVQEIADYLSLN 177

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            ++L  LFL+    +P+++    R+  +  LL+    S+  +A +  +  SF FSKAF+ 
Sbjct: 178 RSYLTELFLKTVQLSPQQFLTRYRITKSEELLQSSSLSIQNIAYSCGYSSSFSFSKAFRK 237

Query: 274 KFGYAPSAVLKNTD 287
             G +PS   K   
Sbjct: 238 VNGLSPSEYRKQKR 251


>UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=Clostridium
           perfringens RepID=B1BNT9_CLOPE
          Length = 285

 Score =  210 bits (536), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 19/255 (7%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKN-----GEQITLHGNCIIFLKPMDIHSY 100
               P     P + N+++  Y + G GK    +      +   +       + P +I SY
Sbjct: 25  EKCDPLHSVGPTVKNNYLFHYVISGKGKFFSVDPKTFEKKYYEVSPGEGFLICPNEICSY 84

Query: 101 HCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155
             +    W   W+EF        M +  +   + I+  +     L  + E+ +     K 
Sbjct: 85  QSDENDPWHYMWIEFNGIKAKLYMEEAGLTPANPIFKLKESINSLKIIEEMKSIISNNKK 144

Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRR-------QIEKLIATLHASLQQRWSVADMAA 208
           N   +FL   +Y +I  +                   I + +  +  +  +  SV D++ 
Sbjct: 145 NP--SFLIGHLYLFINSLIEFSLNSTLNELDTLNELYIREALNFIEENYNRNISVEDVSN 202

Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268
               S+++  R+F ++   TP+E+ +  ++  A +LLK +  S+ +VA+ L + + F+FS
Sbjct: 203 RCNLSKSYFTRIFKKHMNTTPQEFLIQYKMLQACNLLKDKSLSISQVAELLGYSNQFNFS 262

Query: 269 KAFKHKFGYAPSAVL 283
            AFK KF  +PS   
Sbjct: 263 VAFKKKFNLSPSKWR 277


>UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bacteroides fragilis 3_1_12
           RepID=UPI0001B4A5A3
          Length = 302

 Score =  210 bits (536), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 118/292 (40%), Gaps = 13/292 (4%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
           +     N+    +P  I +  I  G  L +L +     +Y       + +   +   + +
Sbjct: 13  KKEGFTNQRAIVLPEAIKK--ILVGNELTNLLYVTDIGYYPHATGHYRARRYGSQQHILI 70

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTS--MMDI 122
           Y  +G G   +  G++  +  +    ++    H Y   E   W  YW+ FT     + + 
Sbjct: 71  YCTEGEGWYSIH-GQRQKVCKDQFFIIEAGLPHIYAASENSPWSIYWLHFTGEKSHLFNS 129

Query: 123 PVGQQSVIYNGE--IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-----MYA 175
              +   I           +    E+  + E   +   + + T  ++ +I        + 
Sbjct: 130 FYNKLHKIDESPNARIKDRMQLFEEIYQNLEMGYSIENLEYTTLCLWHFIASFKFVSQFR 189

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
           +  +  Q    ++ I+ +  +++++ S+ D+A ++  S +   ++FL+ +G TP  Y+  
Sbjct: 190 EINRAKQGDVTQEAISYMRKNIEKKLSLDDIAGSVNYSSSHFGQVFLKKSGYTPLNYFNQ 249

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
            ++  A  LL      + E+A+ L F+D +HFSK F  + G  PS+  K   
Sbjct: 250 LKIQKACQLLDFSDLKIKEIAEQLGFYDQYHFSKVFYKQIGETPSSYKKRNK 301


>UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi
           DSM 13479 RepID=UPI0001C36471
          Length = 287

 Score =  210 bits (536), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 101/274 (36%), Gaps = 13/274 (4%)

Query: 17  NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76
           N+  +  +N+     SL   +                  P     ++  + ++G G    
Sbjct: 4   NMIEIFRKNISGESSSLSFGY-----AGREQCMGSHSFGPARRAHYLIHFIIKGKGVF-F 57

Query: 77  KNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVG---QQSVIYN 132
            + ++  L    +  ++P +   Y+ +    WE  W+ F  +    I        S +  
Sbjct: 58  ADDKKYILKQRDMFLIRPGETTFYYADEVDPWEYAWVAFVGSDAAQITESCGFAYSPVAT 117

Query: 133 GEIYNQELTEVAELITSPEAIK--NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLI 190
                + +  + ++I   +     +   ++ L  I Y ++     + +   +   + + +
Sbjct: 118 YPDSPELIESIDDIIHHMQTGDENDYYLLSRLYNIFY-YLSKPVINTQNTYKNEIVRRTV 176

Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250
             + +S  ++ ++  +A  +     +L RLF    G  PKEY    R+ +A  +L     
Sbjct: 177 NLIRSSYFEKLTIQWLADQVRVDRTYLYRLFKEEVGICPKEYLTQYRIRMATVMLSTTNQ 236

Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           S+ E++    F D+  FS  FK   G+ P    K
Sbjct: 237 SIKEISYACGFTDTSLFSICFKKYLGFTPQQFRK 270


>UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales RepID=Q64XT7_BACFR
          Length = 318

 Score =  210 bits (535), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 110/294 (37%), Gaps = 18/294 (6%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
           Q      E    +P  I + + +   + I   +     +Y   +   +++    + +V +
Sbjct: 24  QKDGFLGEQALVLPPAIVQRMKTDPATSIL--YITDIGYYPKAYNHFRERDTPIDQYVFI 81

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPV 124
           Y  +G G   L +G++  +  N    L     H+Y  +    W  YW+ F  T       
Sbjct: 82  YCTEGRGWFSL-DGQKHPVVPNQYFILPAGLPHAYGADEKEPWTIYWIHFGGTLAPLYCT 140

Query: 125 GQQSVIYN-----GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM------ 173
            +   + +         +       E+    +   +   +++ + + + ++  +      
Sbjct: 141 HRTCRLTDIKPGMHSRISYRTELFEEIFRVLKMGYSLENLSYASSVFHHYLGSLRYLREY 200

Query: 174 ---YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
              +++ +   +   +   I  +  +L ++ ++A++A     S ++   LFL+ TG  P 
Sbjct: 201 REAFSEHRPAGEEDPVNAAIHYMKENLGKKLTLAELADYTGYSSSYFSNLFLKRTGYAPL 260

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            Y+   ++  A   L      V +V   +   D+++FS+ F    G +P    K
Sbjct: 261 SYFNQIKIQKACQFLDFTDMKVNQVCYRVGIEDAYYFSRLFSQIMGMSPREYKK 314


>UniRef50_A4AC34 Transcriptional regulator, AraC family protein n=1
           Tax=Congregibacter litoralis KT71 RepID=A4AC34_9GAMM
          Length = 292

 Score =  210 bits (534), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 101/282 (35%), Gaps = 16/282 (5%)

Query: 14  TPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGK 73
           TP  +   + ++ ++ G    ++                  +    +  +     +G G 
Sbjct: 18  TPGFLLEALEKHPLTCGCYPTAMGFYPKACG-------HFMRREQHDDNLLFLCTEGRGF 70

Query: 74  ILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDI---PVGQQSV 129
           +  + G    +    ++ L     HSY   E   W  YW+ F  +   D     +     
Sbjct: 71  VQTQRG-GFAVATGDMVLLPRDQEHSYAANEQDPWTLYWVHFKGSKAGDFIDHLLPDDDF 129

Query: 130 IYNGEIYNQELTEVAELITSPEAIKNN----LAVAFLTKIIYQWICLMYADGKKDPQRRQ 185
             +  +    LT   +++T      +      A   L  ++ ++         ++  R  
Sbjct: 130 RVHSGVEPSLLTGFEQMLTVGSTGYSLDAYIGAANRLRHLLAEFALCRDRQRSQNMGRLH 189

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           + +L + +   +    S+ ++AA    +       +   TG +P  ++L  +++ A  LL
Sbjct: 190 LRELQSYMREHVSSSLSLGELAAFTGLTPQHFASRYKAETGYSPMRHFLHMKMEAACRLL 249

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
               +SV  +A  L + D  +FS+ F+   G +PS   ++  
Sbjct: 250 DSTQHSVKTIAVMLGYVDPLYFSRMFRQTVGLSPSQYRESQR 291


>UniRef50_A7AB39 Putative uncharacterized protein n=3 Tax=Parabacteroides
           RepID=A7AB39_9PORP
          Length = 306

 Score =  210 bits (534), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 62/293 (21%), Positives = 125/293 (42%), Gaps = 14/293 (4%)

Query: 18  IPLLINENVISS-----GISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCG 72
           +P   +EN+        G   I    +Y  + + + +  +  +  I + +  VY V+G G
Sbjct: 14  LPTNNDENIWGMSISGIGFQSIDPKGSYPLKGHPIGYTFNPDRGRIIDEFALVYIVKGEG 73

Query: 73  KILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIP---VGQQS 128
                N  +  +      F+ P   HSY     + W++Y++ F       +    + + +
Sbjct: 74  TFASINCFEKKISKGDAFFIFPGQWHSYQPIANIGWDEYYVTFQGDYFEKLLNGIINRAN 133

Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP----QRR 184
            I++  + +Q +    E++    A K+    A L  I    I L+Y+  K         +
Sbjct: 134 PIFHIGMNDQIVKHFGEMLDCARAQKSGF-QAVLAGITMHTIGLIYSINKNQDYGSVSMQ 192

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
           +I++    +  ++  +++  D+A +I  S +  R+ F +YTG  P +Y L  +L     L
Sbjct: 193 KIQEACVLMRENIYDKFTPEDIAESINMSYSNFRKSFKQYTGIAPHQYMLQLKLSKIKDL 252

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN 297
           L     S+ ++A  LNF  + +FS  F+ K G  P +  K  ++    A  ++
Sbjct: 253 LSSTEMSIQDIAMKLNFESADYFSYFFRSKTGINPLSYRKEIEKQREKAKKNS 305


>UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS family) protein n=1
           Tax=Paenibacillus larvae subsp. larvae BRL-230010
           RepID=UPI0001692C08
          Length = 288

 Score =  210 bits (534), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 109/276 (39%), Gaps = 15/276 (5%)

Query: 26  VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85
           V S+     + + T          P  +  P + + ++  + + G G  +   G+++ L 
Sbjct: 8   VASNSDPDSASYITVLFSGESQTRPGHQIGPRLCDYYLMHHVISGKGIFMY-RGKELELK 66

Query: 86  GNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSV-------IYNGEIYN 137
                 ++P ++  Y  +    W   W+ F    + +                 + +  +
Sbjct: 67  AGDTFLIEPEELVRYEADQVNPWMYRWVAFQGKGVPEALEKTGFSSSRCIVHTRDNQNVS 126

Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD-----GKKDPQRRQIEKLIAT 192
           +  + +  ++   +   +  A+ +L  +  +    +Y              R ++K I  
Sbjct: 127 ELFSTILSVLQDKKEGAHQKALGYLYVLFGELCEAIYPKTGIGMRTSSESGRTVQKAIHY 186

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ-GNS 251
           L     +  S+  MA  +  + A+L R+F + TG TP  + L  R+D A  LL+Q+   +
Sbjct: 187 LSTQYAEDISIETMADNLGYNRAYLSRIFKQETGLTPVTFLLKLRIDKARFLLRQRMELT 246

Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           + ++A ++ F D  +FSK FK  +  AP+    +  
Sbjct: 247 IEQIASSVGFHDPLYFSKQFKRFYKCAPTEYRDSIK 282


>UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium
           cellulovorans 743B RepID=C5RL17_CLOCL
          Length = 282

 Score =  210 bits (534), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 92/254 (36%), Gaps = 12/254 (4%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
                  P     P +   ++  Y   G G   + NG    L       + P DI +Y  
Sbjct: 24  CGKETCIPNHTWMPNLKERFLIHYIFSGKGSFEI-NGYTYNLESGQGFLISPGDIATYKA 82

Query: 103 EG-LVWEQYWMEFTP----TSMMDIPVGQQSVIYNG---EIYNQELTEVAELITSPEAIK 154
           +    W   W+EF        +  I +  ++ +++    ++       + +         
Sbjct: 83  DDKDPWTYAWVEFNGRLSEKFLHQIGLSSKTPVFSCKKKDLLEASFQYIFDACKKSRNNN 142

Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIP 211
             +  +    +            +K+ +      I + +  +  +  +   +++MA  + 
Sbjct: 143 LLILSSLYHFLAMIHEASAPEQTEKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLS 202

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
            +  ++  LF    G TP+ Y ++ R+D A  L+K    ++GE++  + + D   FS+ F
Sbjct: 203 LNRNYMSTLFKESVGITPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMF 262

Query: 272 KHKFGYAPSAVLKN 285
           K  FG  P     +
Sbjct: 263 KKLFGIPPKNYRNS 276


>UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales RepID=C7X929_9PORP
          Length = 296

 Score =  209 bits (532), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 104/294 (35%), Gaps = 15/294 (5%)

Query: 4   KLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWV 63
                  K E   ++P  +  +       LI+  +      +  +     +K    +  +
Sbjct: 2   VKIKEGFKGERFVSLPEELLASYRREP--LINNLYVRKIGFFPRVKYHFLQKEHGCDYAM 59

Query: 64  AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDI 122
            +Y  +G G   +  G+Q T+     I + P   +S+  + G  W  YW+ F        
Sbjct: 60  LIYCTEGKGWYRIL-GKQYTVEKYQYIIIPPGIPYSFGADEGDPWTIYWLHFQGKLCDQF 118

Query: 123 PVGQQSVIYNGE----IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178
                  +             L    E+ +S         + + +  +Y ++       +
Sbjct: 119 LPSHPVPVTISPNEYSRLQDRLRLFEEIYSSFSMGYIKEYMIYSSMCLYNFLASFIYLEQ 178

Query: 179 -------KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
                     +     ++I  +  ++QQ  ++ ++A+    S +    LF   TG +P  
Sbjct: 179 FRHIMIPSQKEYPFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGETGVSPMN 238

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           Y++  ++  A   ++     + E+A  L F D+ +FS+ F    G +PS   K 
Sbjct: 239 YFIRLKIQKACEYIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRKK 292


>UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella
           multacida DSM 20544 RepID=C9KND9_9FIRM
          Length = 298

 Score =  208 bits (531), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 91/258 (35%), Gaps = 10/258 (3%)

Query: 39  TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98
                 + V  P  +  P + +  +  + + G G     N     LH      ++P    
Sbjct: 18  FLTTFGHSVTGPGHRYGPAVRSYHLIHFILAGKGTFQ-ANQHTYCLHAGQGFLIEPDYQT 76

Query: 99  SYHCE-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNG--EIYNQELTEVAELITSPE 151
           +Y  +    W   W+ F  +   +I     + Q   IY    E   +    V +++    
Sbjct: 77  TYESDAKEPWTYIWVAFNGSRAAEIIASLRLSQADPIYTCTKEQGAKLAAYVQDMLAHNS 136

Query: 152 --AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209
                    +  L + +                   I  +   +   L++ ++V ++A  
Sbjct: 137 FTLSGRYYRLGLLMQFLSVLAEAQRDLLPPADNNAYISHMTNFIRTHLEEPFTVQELADY 196

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
           +  + +++  LF RY   +P EY  + RL  A  LL+    SV  +A +  +  S  F +
Sbjct: 197 MNLNRSYVTTLFKRYLHCSPHEYIQNCRLTKARHLLETTTFSVESIAYSCGYAKSDSFQR 256

Query: 270 AFKHKFGYAPSAVLKNTD 287
           AF  K G  P+A  +   
Sbjct: 257 AFLRKAGMTPTAYRRQQQ 274


>UniRef50_D1PEF6 Transcriptional regulator n=3 Tax=Bacteroidales RepID=D1PEF6_9BACT
          Length = 291

 Score =  208 bits (531), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 12/273 (4%)

Query: 26  VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85
           + + G   I+    Y  + +   +  D +K  I + +  +Y  +G G     +  +  + 
Sbjct: 20  ISTVGREEIAPGEAYPTKGHADGYYFDLQKGRILDEYQLLYQPEGEGVFCSAHLPETKIK 79

Query: 86  GNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMD----IPVGQQSVIYNGEIYNQEL 140
              I  L P + HSYH  G   W+ YW+ F   ++ D      +  +  IY+    N+ +
Sbjct: 80  AGDIFLLFPGEWHSYHPSGTKGWKSYWIGFKGKNIDDRVKAGFLSPEKPIYHVGYSNEII 139

Query: 141 TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK------DPQRRQIEKLIATLH 194
             + E        +   A   +  I+   I  MY+  +             I K    + 
Sbjct: 140 A-LYEEAYKTAQEEVAFAQQTMAGIVNHLIGKMYSLERNIVLSKDTKHVDMINKARLRIR 198

Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254
            SL+   ++ ++A  +  S +  R+LF  +TG  P  Y  + +L  A  LL     S+ E
Sbjct: 199 ESLEDTLTIQEIAQELGISYSSFRKLFKEHTGFAPALYQQNLKLQRAKELLSTTDESIKE 258

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +A  LNF    +FS  FK + G  PS     T 
Sbjct: 259 IAYRLNFESPDYFSAKFKIQTGMKPSDFRNMTR 291


>UniRef50_C6IY48 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp.
           oral taxon 786 str. D14 RepID=C6IY48_9BACL
          Length = 315

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 49/315 (15%), Positives = 110/315 (34%), Gaps = 38/315 (12%)

Query: 2   NGKLQSSDVK----NETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPL 57
           +   +    +       P  +   +N + ++  + +  +       H+       +++P 
Sbjct: 3   HQIRKPDGFEAQMLFVQPDYMLKELNNSTLTRPLFVSDIGFFPNARHH------YRERPE 56

Query: 58  IANSWVAVYTVQGCGKILLKN-----------------GEQITLHGNCIIFLKPMDIHSY 100
            A++ + +Y V+G G +                      +   L    +  +     H Y
Sbjct: 57  GADAHIFIYCVEGEGWVEWSEEPTDGRPDRSGTTTSKMQQSYPLTERQLAVIPAHKPHRY 116

Query: 101 HCEGL-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITS--PEAI 153
                  W  YW           +    + Q   +      + +L E  E       +  
Sbjct: 117 GASTDKPWSIYWFHLQGEDTNALIHTYGLDQGGPVRLPLSVHAQLLEHFEQCYRLLHDKH 176

Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQRR----QIEKLIATLHASLQQRWSVADMAAT 209
            +      + + +   +  +    ++  Q R      ++ +  +   L +  +++++A  
Sbjct: 177 YSLPVQIHVAQTMRHLLSSIGLSAERSAQDRKRERYFDEAVRYMTERLTENLTLSELAKQ 236

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
           +  S+  L  LF R  G  P EY+L  ++  A  LL   G SV E+A  +   D ++FS+
Sbjct: 237 VGLSKQHLVYLFNREAGLPPIEYFLRLKMQRAGQLLDLTGLSVKEIAGAVGLSDPYYFSR 296

Query: 270 AFKHKFGYAPSAVLK 284
            FK   GY+P+   +
Sbjct: 297 LFKKIMGYSPTEYRR 311


>UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=Clostridium
           RepID=B8I1T1_CLOCE
          Length = 265

 Score =  208 bits (530), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 97/249 (38%), Gaps = 7/249 (2%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             ++         P     ++  Y V G G    + G++  L  +C+  ++P ++  Y  
Sbjct: 19  CGWQSCDKGHFFGPASREYYLIHYVVSGSGVFE-RAGKRYPLSKDCLFLIRPYELTFYKA 77

Query: 103 EGL-VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
           +    WE  W+ F  + + D+             +    +     + E + + +      
Sbjct: 78  DKENPWEYIWIGFDGSLVPDLLKNSGFSDDICTMHIPSLSTTFLSMKE-VENLQHSSEIF 136

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
               + ++            K        ++    + ++     SV  +A  +     +L
Sbjct: 137 LCGKIFEMFSYLSEEFSPTPKGSTTSVYCKRAKDYIMSNYANHISVESIANMLGIDRRYL 196

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
            R+F +YTG TP+ + ++ RL+ A  LL + G +V E   +  + D ++FSK FK K+G 
Sbjct: 197 CRIFYKYTGSTPQNFIVNYRLEKAAFLLSKHGYTVAEAGRSTGYDDIYNFSKMFKKKYGV 256

Query: 278 APSAVLKNT 286
            PS    ++
Sbjct: 257 PPSRYKNDS 265


>UniRef50_D2EI06 AraC family transcriptional regulator n=1 Tax=Pediococcus
           acidilactici 7_4 RepID=D2EI06_PEDAC
          Length = 280

 Score =  208 bits (530), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 111/281 (39%), Gaps = 12/281 (4%)

Query: 10  VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69
           + N+   ++ +L++ + +S+   +  +        Y    P    + +  + WV  Y + 
Sbjct: 1   MNNQFTEDVSILVDNDPLSAEFHIYEV-------GYEKCQPTKPFEYIPIDYWVLHYVMD 53

Query: 70  GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTS----MMDIPV 124
           G G     N +   L       L     + Y+ +    W   W+  +       +  I +
Sbjct: 54  GKGYFSAGNSDLQHLSAGDTFLLPANCPNIYYPDKADPWTYVWVGISGELTAKYLAQIGL 113

Query: 125 GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR 184
            +++ + N  I   +      +  + +  +N  +++ +  ++       +A+   +  ++
Sbjct: 114 SRRNFVINASIDKTKEMLFNHVYQAFKDKQNFQSLSAVYSLLDYLQQENHANNPVNQGKQ 173

Query: 185 QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSL 244
             +K++  +  +     +++ +AA      ++L +LF RY GK P +Y    +L  A SL
Sbjct: 174 IFDKILLYVDENFASGLTISQIAANNNVDRSYLYKLFQRYLGKKPSQYVHQLKLQKACSL 233

Query: 245 LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           L++   ++ +++    F  S +F+  F  +    P      
Sbjct: 234 LRKSSLNITQISQECGFSSSAYFTNVFAKEMNSTPLKYRNR 274


>UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus
           halodurans RepID=Q9KAQ8_BACHD
          Length = 287

 Score =  208 bits (530), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 16/258 (6%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             Y   +P  K  P + + ++    ++G G      G+  +L      F+ P ++ +Y  
Sbjct: 23  SGYSQTFPYHKVGPQVHDYFLLHVVLRGKGSFHCA-GKTYSLSAGDSFFIYPKELVTYES 81

Query: 103 EG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNG--------EIYNQELTEVAELITSPEAI 153
           +    W   W+ F      +          +          +  Q   ++   +T  +  
Sbjct: 82  DRTDPWYYTWVAFQGPFFEETLRSAGIQPESPIVSLGGKGSMIKQLFYDLYSSMTELKVA 141

Query: 154 KNNLAVAFLTKIIYQWICLM-----YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAA 208
            +    A+L  II ++I        ++  +     + I+ +I  L     +  S+  +AA
Sbjct: 142 SSLKTNAYLRLIISEFIEQTTILDEHSQKEDHQLDQHIQDVIRLLSLRYFEPLSIETIAA 201

Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268
           +   +  +  + F  YTG +P +Y L+ R+  A +LL++   ++ EVA ++ + D  +FS
Sbjct: 202 SYGYNRTYFSKKFKEYTGYSPSKYLLNIRMKKAEALLQKS-LTIQEVASSVGYRDPLYFS 260

Query: 269 KAFKHKFGYAPSAVLKNT 286
           K FK   G APS   +  
Sbjct: 261 KQFKQWSGVAPSVFRQQH 278


>UniRef50_A6M1I8 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           beijerinckii NCIMB 8052 RepID=A6M1I8_CLOB8
          Length = 279

 Score =  208 bits (529), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 101/254 (39%), Gaps = 7/254 (2%)

Query: 39  TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98
           T     + +  P     P I + ++  Y + G GK  + N +   L       + P +  
Sbjct: 18  TIYYGGHEICAPSHSFGPAIRHHYLLHYILNGKGKYYVNN-KCYELQRGEAFLICPGEST 76

Query: 99  SYHCEGL-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI 153
            Y  +    WE  W+ F        + +  + + ++I+           +  LI + E  
Sbjct: 77  YYKADKEEPWEYCWVSFDGNDASTILKNCGLSKNNLIFKDNSNGIFKERLLSLIHNYEED 136

Query: 154 -KNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
             N  A+     + +  +       +K+      +K    ++ +      V+D+A  +  
Sbjct: 137 SHNEYALIGQLYMCFSSMYDQVNIKEKNTCESYADKARDYIYNNFGYDIKVSDIAKYVGI 196

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
              +L ++F+     +P++Y + +RL+ A++LL+    ++ E++ +  F D+  F K FK
Sbjct: 197 DRTYLYKIFMEEYKISPQKYLISSRLNTAVNLLETTKMNITEISYSCGFKDTPTFYKHFK 256

Query: 273 HKFGYAPSAVLKNT 286
            +F   P    K+ 
Sbjct: 257 KQFNITPVQYRKSN 270


>UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D3B4_PAESJ
          Length = 300

 Score =  208 bits (529), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 94/256 (36%), Gaps = 12/256 (4%)

Query: 43  EHYRV--IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100
             Y+        + +      +  +Y   G G+    N E I +    ++   P     Y
Sbjct: 46  CGYQRLQTRSLSRNREHGRVDFQLIYITGGKGRFRFHN-ETIEVPSGSLVVYTPGQPQHY 104

Query: 101 -HCEGLVWEQYWMEFTPTSMMDIPVGQQ------SVIYNGEIYNQELTEVAELITSPEAI 153
            +      E YW+ FT  S  D              +   +       ++ + + S   +
Sbjct: 105 SYQAEDGTEVYWIHFTGYSAYDYLQQFGLLTQPVHTVGIIDDVTALFKKIIQELNSHRPL 164

Query: 154 KNNLAVAFLTKIIYQWICLMY--ADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211
            +++  A+L +++      +    +     +   I ++IA +H    +  S++D+A    
Sbjct: 165 GSHMVNAYLLEMLTLLGRRLQTAEEPGAQGRHPDINQMIAFIHEKYSESLSISDLAGECS 224

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
            S       F   TG TP +Y  + R++ A  LL +    V EVA  + + +  +FS+ F
Sbjct: 225 LSVFRFIHKFKEVTGMTPMKYITEIRINEAKKLLSESSLHVKEVAAVVGYDNPLYFSRIF 284

Query: 272 KHKFGYAPSAVLKNTD 287
           +   G  PS   K   
Sbjct: 285 RSTVGIPPSEYKKQFQ 300


>UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides RepID=A6KYC9_BACV8
          Length = 298

 Score =  207 bits (528), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 108/300 (36%), Gaps = 26/300 (8%)

Query: 7   SSDVKNETPYNIP----LLINENVISSGISLISL-WHTYADEHYRVIWPRDKKKPLIANS 61
               K E    +P      + ++ + S + +  + ++ +A  HYR     +         
Sbjct: 5   KDGFKGERAIVLPAFLIEELKQDPLGSELYITDIGYYPHAYFHYRKRDTEEV------TE 58

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM 120
           ++ +Y ++G G   L +  Q  +  N    L     H+Y       W  YW+ F  T   
Sbjct: 59  FILIYCMEGEGWFEL-DKHQYAVTANQFFILPEHQAHAYGSNEENPWTIYWIHFNGTKAA 117

Query: 121 DIPVGQQSV----IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
               G                + L    E+ +S     +   + + T  ++ ++  M   
Sbjct: 118 FFSAGFDRPKSITPQEDSRIKERLVLFEEIYSSISFGYSKNYMLYATTSLFHFLGSMKFI 177

Query: 177 GKKDP---------QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
           G+             +  ++  I  +  +L +   +AD+AA +  S ++   LF   TG 
Sbjct: 178 GEYRDCGSMRNSYRNKDVVQIAIHFMQENLSKTIRLADIAAEVNLSVSYFSNLFEEKTGS 237

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +P  Y    R+  A   L      + +++  + + DS +FS+ F    G  PSA  +   
Sbjct: 238 SPLRYLTYLRIQEACHYLDFTNLKINQISPLVGYEDSLYFSRLFTKTMGVPPSAYKEKKK 297


>UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CX81_PAESJ
          Length = 272

 Score =  207 bits (528), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 11/248 (4%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104
               P     P I + +   +  +G G + + +     L         P  + SY  +  
Sbjct: 26  EDCSPNHAFGPGIRDHYKVHFVHRGTGTVQIGSS-TFKLTSGQAFLAYPGKVISYQADAF 84

Query: 105 LVWEQYWMEFTPTSMMDIPV-----GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159
             W   W+ F    + ++        ++SV    + +   L E+           +    
Sbjct: 85  DPWSYSWIGFRGEQVGEVLERTKLTSEESVFPMDKQFMPNLYELLLESADHPKNHDLRLT 144

Query: 160 AFLTKIIYQWICLMYADG----KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
           + L + +   I  + +      +   Q   I + +  +H+   +  +V  MAA++     
Sbjct: 145 SLLIEFLTVLIDSLPSSADAGVQPRKQDTYIHRSLDFIHSHFSEPITVQQMAASLGLDRK 204

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           +L  LF    G  P++Y L+ R+D A  LL++   S+GEVA ++ + D+  FSK FK   
Sbjct: 205 YLSYLFKEAMGLPPQQYLLNYRMDRAGELLRKGEYSIGEVARSVGYQDALLFSKMFKKLK 264

Query: 276 GYAPSAVL 283
           G  P    
Sbjct: 265 GVPPKLYK 272


>UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococcus
           RepID=MSMR_STRMU
          Length = 278

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 55/278 (19%), Positives = 115/278 (41%), Gaps = 14/278 (5%)

Query: 25  NVISSGISLISLWHTYADEHY--RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQI 82
           N+++            + +HY            P I +++V  + ++G GK+ + N   +
Sbjct: 2   NILNIYNEFDINNFDLSVDHYGSEKCDRGYSFGPTIRDNYVIHFILEGKGKLTI-NQHTL 60

Query: 83  TLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIP---VGQQSVIYNGEIYNQ 138
            L    I  L       Y  +  + W   W+ F+ +   +I       +    +    ++
Sbjct: 61  DLAAGDIFLLPKDISTFYQADLQMPWSYIWIGFSGSKAENILKQSSLFKRFYCHSGRSSK 120

Query: 139 ELTEVAELITSP----EAIKNNLAVAFLTKIIYQWICLM---YADGKKDPQRRQIEKLIA 191
             +++  +I        ++   L V  L K++   I      + +      +  + ++  
Sbjct: 121 LFSQMMTIIQFANTPLTSVNELLMVGELYKLLAALIEEFPLSHLEESNSSTKAYVNQVKK 180

Query: 192 TLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNS 251
            +H+       V D+A  +  S ++L ++F + T  + KEY L  R+  +  LL+    S
Sbjct: 181 IIHSQYGSSLRVNDIAKKLNLSRSYLYKIFRKSTNLSIKEYILQVRMKRSQYLLENPKLS 240

Query: 252 VGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
           + E+++++ F DS  FSKAFK+ FG +PS   K    +
Sbjct: 241 IAEISNSVGFSDSLAFSKAFKNYFGKSPSKFRKEIQNN 278


>UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
           DSM 15981 RepID=C0CW55_9CLOT
          Length = 286

 Score =  207 bits (527), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 98/255 (38%), Gaps = 10/255 (3%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101
              ++       +   + + ++  + ++G G   L NG +  +       + P     Y 
Sbjct: 24  RTGHQQCSGGYHRGLEVRDFYLIHFVMEGGGVYTL-NGRKHPVRKGQAFLIYPSMPIDYQ 82

Query: 102 CEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160
            +    WE  W+ F       +         N  I  ++   + EL+ +    + +    
Sbjct: 83  ADAADPWEFCWVGFNGNDARLLMNATGFTPQNPVITLKDPERMEELLMNIYRCRGHHPHE 142

Query: 161 FL--TKIIYQWICLMYADG------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
           F+  T  +Y+ +  +  +       +       +++    + +  Q   ++ D+A  +  
Sbjct: 143 FINMTAKLYELLAFLIQEASDPMPAQSRTGVEHVQRACDFIASHYQDPITINDIAGHVGI 202

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
             + L R+F  +   +P +Y  + RL  A +L+ +Q  +V EVA    F D  +FS  FK
Sbjct: 203 CRSRLYRVFKAHLSISPLQYLTEFRLREACNLMNRQKATVKEVAYAAGFSDPLYFSTVFK 262

Query: 273 HKFGYAPSAVLKNTD 287
              G +P   +K++ 
Sbjct: 263 KSLGQSPKEYMKSSK 277


>UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=Leptotrichia
           buccalis C-1013-b RepID=C7NB33_LEPBD
          Length = 283

 Score =  206 bits (526), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 10/255 (3%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
            Y    P  K  P   + ++  Y   G G      G+   L      F++P +I  Y  +
Sbjct: 21  GYEETKPLHKYGPTTRSGYMLHYIKSGKGTFYS-RGKTFHLKAGEFFFIEPEEIIWYEAD 79

Query: 104 G-LVWEQYWMEFTPTSMMDIP----VGQQSVIYN----GEIYNQELTEVAELITSPEAIK 154
               W  YW+ F    + +      V +   I++    G+I   ++ E+ E+    E   
Sbjct: 80  EYEPWAYYWIGFRGNMVSEYLRRTSVNKNKPIFSAQKGGDIIRDKIVEIFEISVISEDND 139

Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
             L    L  + Y   C      KKD +   + K +  +  +      ++++A  +    
Sbjct: 140 LLLNARLLEILYYLSECFPLTYAKKDSKNTILAKALQIMRNNFDTSVHISEIAKALYIDR 199

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
            +L R+F       PK+Y  + R+  A  LL Q    V  +A ++   D+ +FSK FK+K
Sbjct: 200 TYLHRIFKEKMKIAPKDYLTNLRIAKAKELLTQTDYPVNIIAQSVGIEDAQNFSKLFKNK 259

Query: 275 FGYAPSAVLKNTDQH 289
              +P    K+    
Sbjct: 260 ENISPINYRKSYKNS 274


>UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Oribacterium sinus
           F0268 RepID=C2KWQ1_9FIRM
          Length = 311

 Score =  206 bits (526), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 91/263 (34%), Gaps = 12/263 (4%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
                  P  +  P   N ++      G G + + NGE   L       L P     Y  
Sbjct: 41  CGKERCVPGHRYGPNKRNLYLLHVVYSGVGTLFV-NGEYYHLSKGNAFLLYPHVEAWYEA 99

Query: 103 E-GLVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELIT------SPE 151
           +    W  +W+                 ++  +      +  L  + +++         +
Sbjct: 100 DLTEPWSYFWIGVRGVDADSFFTEVGFSKEKPVGIVHQMDNLLLYINKILQKQDYTIEEQ 159

Query: 152 AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211
             ++     F   ++       +  G          ++ A L     +  S++ +A  + 
Sbjct: 160 LSRSAYMHLFFANLLRGKQEEAHWGGPLKDLGSHSARVRAYLDEHYHEDISISALAKEMG 219

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
              A L   F + TG +PKEY L  R+  A ++L++ G S+ E+A  + + D   FSK F
Sbjct: 220 IHRAHLFNSFKKDTGYSPKEYLLYIRMQNAKAMLRRTGKSIAEIAYMVGYHDPLSFSKIF 279

Query: 272 KHKFGYAPSAVLKNTDQHPTDAS 294
           + K G +P       ++   +  
Sbjct: 280 RQKIGVSPLQYRNMKEEMLYNRE 302


>UniRef50_B8KL56 AraC protein, arabinose-binding/dimerisation n=1 Tax=gamma
           proteobacterium NOR5-3 RepID=B8KL56_9GAMM
          Length = 299

 Score =  206 bits (525), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 110/282 (39%), Gaps = 16/282 (5%)

Query: 14  TPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGK 73
           TP  +   ++++ +++G    ++ +    + + +     +++    +  + ++  QGCG 
Sbjct: 25  TPGFLLDALDKHPLTAGCYPAAMGYYPNADGHFM----HRER---HDDNLLMFCTQGCGW 77

Query: 74  ILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVG---QQSV 129
           +    G  +++     + L     HSY  +    W  YW+ F      D       +   
Sbjct: 78  VQTPAGR-VSVDAGDTVVLPQGLTHSYAADERTPWTLYWVHFQGRDAQDFVEHLLIEDGY 136

Query: 130 IYNGEIYNQELTEVAELITSPEAIKNN----LAVAFLTKIIYQWICLMYADGKKDPQRRQ 185
             +  +    LT   +++T             A   L  ++ ++         ++    +
Sbjct: 137 RIHSGVEPSLLTGFEQMLTVGSTGYRLDAFIGAANRLRHLLAEFALCRDRQRGQNMGAMR 196

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
           + +L + +   +    S+ ++AA    +       +   TG +P  ++L  +++ A  LL
Sbjct: 197 LLELQSFMRERVSSSLSLQELAAFTGLTPQHFATRYKAETGYSPMRHFLHMKMEAACRLL 256

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
               +SV  +A  L + D  +FS+ F+   G +PS   ++  
Sbjct: 257 DSTQHSVKFIAANLGYVDPLYFSRMFRQTVGLSPSQYRESQR 298


>UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA
           RepID=C6JEQ5_9FIRM
          Length = 301

 Score =  206 bits (524), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 102/271 (37%), Gaps = 24/271 (8%)

Query: 28  SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGN 87
           S  ISLI     +    +    P         + ++  + + G G      G+  +L   
Sbjct: 22  SLDISLIHTGKEHCPPGHICSMP--------RDEFIIHFVLDGTG-FYSAGGQTWSLTPG 72

Query: 88  CIIFLKPMDIHSYHCEG-LVWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTE 142
            +  + P +  +Y  +    W   W+ F      + + +    +  ++         L  
Sbjct: 73  QMFVIYPNEPVTYGADETNPWTYAWIGFRGIRAHSMVKECGFSKNQLVLPAPDQKIILKH 132

Query: 143 VAELITSPEAIK--NNLAVAFLTKIIYQWICLMYADGKKDPQRR--------QIEKLIAT 192
           +  ++   +  K  +    A+L  ++ +          ++ +           +E  I  
Sbjct: 133 IDYMLNHKQLSKANDLRRQAYLILLLAELAGFHEKQSAQNKKNAKYAYSTSVYVELAIEY 192

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
           +    Q+   ++D+A  I  S A+L   F +  G + + + +D ++  A SLL     SV
Sbjct: 193 IKDMYQKGIGISDIADNIGISRAYLNSSFQKELGMSAQTFLIDYKMHKAASLLVSTSLSV 252

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            E+A+ + + D   FSKAFK KFG +P    
Sbjct: 253 KEIANNVGYEDQLVFSKAFKKKFGMSPKNYK 283


>UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Bacillales
           RepID=C6IZS2_9BACL
          Length = 287

 Score =  205 bits (522), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 103/259 (39%), Gaps = 14/259 (5%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-G 104
               P  +  P I + ++  +  QG G    +      L       + P  + SY  +  
Sbjct: 28  SQTLPDHRLGPKIYDYFLLHFVEQGKGTFRTE-SASYELSEGDGFLILPDQLVSYASDVA 86

Query: 105 LVWEQYWMEFTPTSMMDIP----VGQQSVIYN---GEIYNQELTEVAELITSPEAIKNNL 157
             W   W+ FT     ++        Q  ++           L+ V +   + +   + L
Sbjct: 87  EPWRYRWIAFTGVKAAELVKRVGFTPQQPVFRQGGNSPIPAMLSSVLQAFQTKKNSSHLL 146

Query: 158 AVAFLTKIIYQ----WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
           ++  L +I+ +              +   +R ++++I  + +      S+  M A++  +
Sbjct: 147 SLGLLHQIMAEAQETLGMASALPSGESGVQRIVKQMIHYMASQYAHPVSIEQMCASLGYN 206

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ-QGNSVGEVADTLNFFDSFHFSKAFK 272
            A+L R+F + TG TP  Y L  R+D +  LL++    S+ ++A ++   D  +FS+ F+
Sbjct: 207 RAYLSRIFKKETGFTPVTYLLKLRIDKSRQLLRERPELSIEQIAASVGLTDPLYFSRQFR 266

Query: 273 HKFGYAPSAVLKNTDQHPT 291
                +PS   +   ++P 
Sbjct: 267 RFHNESPSEYRRAVTRNPA 285


>UniRef50_C9KYS9 Transcriptional regulator n=7 Tax=Bacteroides RepID=C9KYS9_9BACE
          Length = 312

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 113/292 (38%), Gaps = 11/292 (3%)

Query: 2   NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61
           +G     + K     ++       V + G   I     Y  + +   +  + +K  +   
Sbjct: 16  DGTSLGLEFKYLIVNDMDRKFGLWVNTVGYQSIPPDSPYPLKEHPSGYFFNAEKGRVLRE 75

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM 120
           +  VY  +G G     +  +  +    ++ L P   H+Y       W +Y++ F   ++ 
Sbjct: 76  YQLVYITKGRGLFSSDSTPEKQVCKGRLMVLFPGQWHTYRPLRQTGWTEYYIGFEGPAID 135

Query: 121 ----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
               +  + Q+  I    I N+EL  +     +        A  +L+ I+   I ++ + 
Sbjct: 136 AIVANSFLSQEQQILEVGI-NEELVSLFSRALAVAEADKISAQQYLSGIVLHIIGMILSI 194

Query: 177 GKK-----DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
            K          ++IE+    ++ ++       ++A  +  S +W RR+F  YTG  P +
Sbjct: 195 SKNKVFEMSDVDQKIEQAKIIMNENVSGNVDPEELAMRLNISYSWFRRVFKEYTGYAPAK 254

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           Y+ + +L  A  LL     SV E++  L F  + +F   FK + G  P    
Sbjct: 255 YFQELKLRKAKQLLVGTSQSVKEISFFLGFQSTEYFFSFFKKRTGLTPLEYR 306


>UniRef50_C5BZM6 Transcriptional regulator, AraC family n=1 Tax=Beutenbergia
           cavernae DSM 12333 RepID=C5BZM6_BEUC1
          Length = 291

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 92/289 (31%), Gaps = 12/289 (4%)

Query: 8   SDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYT 67
                +    +P  +    +    +   L       ++       +++       V +  
Sbjct: 4   DGFPGQRLRVLPRPLVHTALGRPPTSRLL--VTDAGYFPHAMNHGRRRTRGTREAVVILC 61

Query: 68  VQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPV-- 124
             G G+     G    +    ++ + P   H Y  +    W  +W       +       
Sbjct: 62  TDGVGRCE-AGGRVTEVGAGQVLVIPPGLPHLYWADMHQPWTIWWFHAVGEDVTPFLEAM 120

Query: 125 ---GQQSVIYNGEIYNQE--LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179
                  V+   +++     + +V   +   E + + +  A     +   +   +  G  
Sbjct: 121 VCTNAARVVGVHDVFRATGGIEDVVRAMEQDETLPSLVTAAGAAWSVLAQLTADHLSGGA 180

Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239
           D     +      L        SV ++A     S +    LF   TG    EY    R+ 
Sbjct: 181 DQAEP-VRAAQEYLRLHFHLPVSVPELARIAGLSTSHFAALFRAATGSGVSEYVKRLRMS 239

Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
            A  LL     +V EVA T+ + D+F+FS+ F+   G +P+   +   +
Sbjct: 240 RARELLLTSDRTVAEVATTVGYPDAFYFSRQFRRVAGVSPTEYRRAFHR 288


>UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulatory protein n=15
           Tax=Bacilli RepID=Q4V1B1_BACCZ
          Length = 301

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 97/259 (37%), Gaps = 10/259 (3%)

Query: 39  TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98
            +    +    P     P + NS++    + G GK  +K  ++ +L    +  + P +  
Sbjct: 19  YFDFCGFSKTLPFHAFGPAVRNSYIIHVVLDGKGKYYVKE-KKYSLKKGDLFLIPPGEST 77

Query: 99  SYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPE--AIKN 155
            Y  +    W   W+ F      +I         N  + +  + +  E+I      +   
Sbjct: 78  FYRSDAEEPWLYAWLSFGGKVAEEIINFSNFKDDNYAVTSTNIQQYLEIILECMNCSYST 137

Query: 156 NLAVAFLTKIIYQWICLMYADGK------KDPQRRQIEKLIATLHASLQQRWSVADMAAT 209
                 L ++ Y+++ L   DG       K    R   + +  +     +  +V+D+A  
Sbjct: 138 LENELKLNELTYRFLRLFLTDGSSLSPGVKQKFSRLAIEAMIYIGKHYIEEITVSDVANH 197

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
           +  + + L R+F  + G + K++ +  R++ A  LL     SV  ++  + F     FS+
Sbjct: 198 LAVNRSHLSRVFQNHFGISMKDWIIRMRINHAAYLLSMTNESVENISYQVGFHSLAAFSR 257

Query: 270 AFKHKFGYAPSAVLKNTDQ 288
            FK      P+   K   +
Sbjct: 258 IFKKVTKETPTHYRKRMSK 276


>UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CRK8_PAESJ
          Length = 284

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 94/256 (36%), Gaps = 14/256 (5%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105
           +   P     P + + ++  Y   G G+  L       LH      + P  +  Y  +  
Sbjct: 27  QDCDPGHYWGPGLRDMYIIHYVHSGTGQFRLGEL-SYELHAGQGFLIIPGSLVYYKADED 85

Query: 106 -VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160
             W   W+         +     +   + I++          V E               
Sbjct: 86  NPWTYSWVGLKGLHAKSLLQRAGLSPANPIFDATEQKDFFESVYEQCHQALEDHPGSGDL 145

Query: 161 FLTKIIYQWICLMYADGKK--------DPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
           F   ++YQ++  + A  K+        + +   I K +A +  S     SV D+A  +  
Sbjct: 146 FSQSLLYQYMARLVACNKQPSAPAHAVNTKEAYINKAVAFIENSYSLPISVQDIANFVGL 205

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
              +L  LF    G + + + L  R++ A+ LL  Q  ++G++A ++ + D F FSK FK
Sbjct: 206 DRTYLSGLFKAQLGVSLQAFLLRFRMNRAVELLHHQELTIGDIARSVGYTDPFLFSKMFK 265

Query: 273 HKFGYAPSAVLKNTDQ 288
              G +P     + ++
Sbjct: 266 RVIGSSPRTSRDHINR 281


>UniRef50_C6VXI4 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter
           fermentans DSM 18053 RepID=C6VXI4_DYAFD
          Length = 298

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/295 (22%), Positives = 109/295 (36%), Gaps = 16/295 (5%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
           +S     E    IP +   +     + LIS        +Y        ++P   +  + +
Sbjct: 3   KSRGFDGELIIEIPKVATSH--CEQLPLISHLFISRMGYYPKALHHYYQRPNGISQAILL 60

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM---- 120
           Y   G G I L  G Q+ +    +I L     H+Y  +    W  YWM            
Sbjct: 61  YCTDGQGWIELG-GNQLHVRAGEVILLPTELPHAYGADTQNPWSIYWMHIAGDHSDAAVA 119

Query: 121 -----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF-LTKIIYQWICLMY 174
                D    +   +   +  N   T +A  +    +  N L     L   +  +I   +
Sbjct: 120 AVMDRDGEPARAVHVGFSDERNALFTHIASTLLKGYSASNLLQANLALPHYLSSFIAPEH 179

Query: 175 ADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232
              +K         EK I  +  +L    S+ ++A ++  S ++  R F + TG  P EY
Sbjct: 180 FGAQKPSAGAGSPTEKAILYMQENLSNSLSLDNIARSVNLSVSFFSRRFKKDTGYAPIEY 239

Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +   R+  A  LL      + EVA  +   D F+FS+ FK + G +P+   KN D
Sbjct: 240 FNYLRIQKACQLLHFSTWRINEVASAIGIDDPFYFSRLFKQQMGLSPAHYRKNKD 294


>UniRef50_Q28MQ0 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28MQ0_JANSC
          Length = 313

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 105/269 (39%), Gaps = 9/269 (3%)

Query: 28  SSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQ-ITLHG 86
           S+G + ++ +  Y    +       K +  +  ++  V+  +G G++ L +G +   +H 
Sbjct: 36  SAGFTQVAPYAVYPAGTHPKDHLFSKTRGRVLQAYQIVFISKGRGRVELGSGRKAQEIHA 95

Query: 87  NCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQELT 141
             +  L P   H Y  E    W ++W+E   T+         +     I     +     
Sbjct: 96  GQVFVLFPNVWHRYAPEPSVGWTEHWVECKGTAFDMSLNAGLLDPGRPIIRHPNFEAVHD 155

Query: 142 EVAEL--ITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ 199
             AE+  +   +A+ N   ++ L+  +   +     +  +D   R +      L      
Sbjct: 156 TFAEIHGLAGTDAVGNQPVLSMLSLKLLAILA-GPRNANEDSTNRLVNSARMILLEHCTG 214

Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259
           +  + D+A  +  S + LRR F   TG + K+Y +  R+  A  LL     SV  VA  L
Sbjct: 215 QRPMEDIADELNVSYSTLRRTFRVQTGMSMKDYQMAMRIQKAKDLLDNTELSVKGVAGQL 274

Query: 260 NFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
            F  +FHFS  F+   G  PS       Q
Sbjct: 275 GFSSAFHFSSQFRKTVGCPPSDWRARLGQ 303


>UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=Bacteria
           RepID=C7G788_9FIRM
          Length = 292

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 100/291 (34%), Gaps = 12/291 (4%)

Query: 8   SDVKNETPYNIPLLINENVISSGISLISLWHTYA-DEHYRVIWPRDKKKPLIANSWVAVY 66
             +  E      +    +VI++  +       +  +  Y         +    NS++   
Sbjct: 2   QKLFFEKYKTSEVTNTRSVINTPSAFTRKNFFHIQEAGYLKSLKSHLSRRSELNSYLFFV 61

Query: 67  TVQGCGKILL------KNGEQITLHGNCIIFLKP-MDIHSYHCEGLVWEQYWMEFTPTSM 119
            + G G++              T H     FL    +      +   WE  W+ F     
Sbjct: 62  VLSGSGEVTYREPLSEGGMISSTAHAGDCFFLDCSGEYTHISTDEDPWELLWIHFNGPEA 121

Query: 120 MDI---PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
                      +  +    + + +  +  +I   E   ++  +    +II+    +    
Sbjct: 122 RAYYTYFRDHHNWHFRSAHFTELINAIESIIRYNEEPTDDTDLLTAQQIIHILTLICTES 181

Query: 177 GKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
            +K+     +++ ++  L     +  S+  +A     S+ +L R F +  G T  +Y L 
Sbjct: 182 NEKNELLSDKLKTILHYLDEHYTENISLDQLAEQFFISKYYLSREFKKEFGTTVIQYVLA 241

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            R++ A  LL+   +S+ E+A      D+ +F+K F+   G   S   K  
Sbjct: 242 KRINNAKELLRYSNSSIEEIAHLCGIDDASYFNKVFRKMEGCTASEYRKRW 292


>UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales RepID=A6LD39_PARD8
          Length = 297

 Score =  204 bits (519), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 108/291 (37%), Gaps = 17/291 (5%)

Query: 9   DVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTV 68
               +     P  + E  +++ +    +   ++  ++         +      ++ +Y  
Sbjct: 7   GFSGQRLIVYPFYVIEQALNNPLVADLV--VHSMGYFPKAESHYIDRASGCGEYLLIYCT 64

Query: 69  QGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQQ 127
           +G G   + +G++  +  N    L     H Y   E   W  YW  F       I    Q
Sbjct: 65  KGEGWY-VLDGKRYVVPENHFFILPAEKPHQYGSSEHDPWYIYWAHFKGKKAKYISDQLQ 123

Query: 128 SVIY----NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM-----YADGK 178
            VI     +       +    EL+   E+  +   V ++       I        Y + K
Sbjct: 124 GVIPIDMDDNSRIGDRIAFFDELLNVLESGTDEATVNYVNLSFNHLIASFLYVKTYREAK 183

Query: 179 KDPQRRQ----IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
               + +    I      +  +L+ + ++ ++A+    SE+++ RLF + TG  P  Y+L
Sbjct: 184 FSKSKAENTFFISLATHFMTENLENKLTLKELASHFGYSESYMYRLFFKETGYAPMNYFL 243

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
             ++D A  LL      + +VA  L F D ++FS+ FK   G +P     +
Sbjct: 244 HMKIDRACQLLLHTNMKINQVALKLGFDDPYYFSRIFKKIVGTSPKDYRHS 294


>UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Bacillales
           RepID=C6IVE8_9BACL
          Length = 289

 Score =  204 bits (519), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 91/256 (35%), Gaps = 18/256 (7%)

Query: 49  WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVW 107
            P  +  P + + ++     +G G      G++ +        + P  + +Y  +    W
Sbjct: 32  HPNHRIGPSVHDYFLLHTVFEGKGTYTWG-GQEYSCRTGDTFVIFPEGLFTYEADSLDPW 90

Query: 108 EQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELI--------TSPEAIKNNLAV 159
              W+    + ++              + + E  E+ EL          S      +L  
Sbjct: 91  HYAWVALRGSGVLRQLADVGITPDKPVVSSGEPEELRELYARLRSSFRQSDHPHLESLEA 150

Query: 160 AFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIATLHASLQQRWSVADMAATIPC 212
           A    ++     +   +              RQ+E+ I        Q+  + ++A  +  
Sbjct: 151 AGWVTLLLHHFGVANREHLPRSAAKEPAMIDRQVEQAIRWFQLQYPQQIGIEELARNLGY 210

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
             A L   F   TG +PK+Y    R++ A  LL     ++ ++A ++ F D+ +FS+ FK
Sbjct: 211 HRAHLFSAFKARTGLSPKQYLTKVRIEKAKELLAGP-LTIDQIASSVGFNDALYFSRQFK 269

Query: 273 HKFGYAPSAVLKNTDQ 288
              G +PS       +
Sbjct: 270 KSTGKSPSEYRHGNGR 285


>UniRef50_A3CML2 Arabinose (Multiple sugar metabolism) operon transcriptional
           regulator, putative n=29 Tax=Firmicutes
           RepID=A3CML2_STRSV
          Length = 290

 Score =  203 bits (517), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 102/259 (39%), Gaps = 16/259 (6%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             Y    P     P I +++V  Y  +G G+   K G+ + L    +  LKP ++  Y  
Sbjct: 33  YGYEECTPSYSFGPAIRDTYVLHYITKGKGQFHYK-GKIVDLKAGDLFLLKPNELTFYQA 91

Query: 103 EGL-VWEQYWMEFTPTSMMDIPVGQQS-----VIYNGEIYNQELTEVAELI--TSPEAIK 154
           +    W  YW+  T   + D     Q      ++ N E     + ++ E +   + +   
Sbjct: 92  DKEEPWSYYWLGMTGGRVYDYFNHSQIAEDCYLLANQERKTDRIGKIVENLVYFAEQTKS 151

Query: 155 NNLAVAFLTKIIYQWICLM------YADGKKDPQRRQIEKLIATLHASLQQR-WSVADMA 207
           N LA   +   +Y+ I  +               ++        +         S+ DMA
Sbjct: 152 NQLAQLHIMGQLYELIFHLGSVAYKPQANTLSASQQLYLACKQIIDTQYPNPNLSIQDMA 211

Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267
             +    ++L  +F      +PKEY    R+  A  LLK     V  +A ++ F D  +F
Sbjct: 212 IKLSVHRSYLTTIFKEEHQSSPKEYLEYVRMHRAKQLLKSTREPVQFIAYSVGFSDPLYF 271

Query: 268 SKAFKHKFGYAPSAVLKNT 286
           SKAFK  FG++PS+  + +
Sbjct: 272 SKAFKKYFGFSPSSFREQS 290


>UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi
           DSM 13479 RepID=UPI0001C36461
          Length = 276

 Score =  203 bits (517), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 86/255 (33%), Gaps = 7/255 (2%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
                        P + +  +  + ++G G      G+   +       ++P ++  Y  
Sbjct: 6   CGREDCEKGHFFGPAVRSHQLIHFVLKGKGIYRTGYGQ-YEIKEGEAFLIRPGEVTYYQA 64

Query: 103 E-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSP-----EAIKNN 156
           +    W   W+ F       +                E+T V+            A +N 
Sbjct: 65  DFEEPWSYAWIAFDGDGAEALLERYYPDHSFPVCAMGEITAVSGWFEGLLGAFGSAEENR 124

Query: 157 LAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216
             V     +I   +      G    +    ++ +A +  +      ++++A  +     +
Sbjct: 125 ERVLGYFYLIMACLLRSGKGGVPVDEEGYFKRAVAFIRHNYSYPIQISEIAGYVGIDRTY 184

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
           L R+F+   G +PK+Y    RL+ A  +L Q    + E+A +  + DS  F + F+   G
Sbjct: 185 LYRIFMHQAGVSPKQYLSRYRLEEAKEMLVQTEYRITEIAYSCGYHDSSSFCRHFQKATG 244

Query: 277 YAPSAVLKNTDQHPT 291
            AP+         P 
Sbjct: 245 NAPARYRSMKKIKPG 259


>UniRef50_A8GGG4 Transcriptional regulator, AraC family n=2 Tax=Serratia
           RepID=A8GGG4_SERP5
          Length = 282

 Score =  203 bits (516), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 96/259 (37%), Gaps = 12/259 (4%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104
                     P +   ++  Y + G G +  + G    +       + P D+ +Y  +  
Sbjct: 23  ENCDKGHSFGPAVRQHYLFHYVISGTGVLHSEYG-AFPVVAGEGFLIHPHDVTTYRADKK 81

Query: 105 LVWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEV--AELITSPEAIKNNLA 158
             W   W+E           +  + +Q  IY     ++    +     + S +       
Sbjct: 82  DPWHYMWLEVDGLVAGKIFEECRLSRQFPIYRPRKTDETPQALSYLRQLVSHDDEHRLKT 141

Query: 159 VAFLTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEAW 216
           +          I        + P    + + K +  +     +  ++  +AA    + ++
Sbjct: 142 LGLSYLFFSALIDNALQGSDEHPSDKTQHLHKAVKLIENRYHEHLTIERLAAYCNINRSY 201

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
           L RLF    G  PKEY L+ R+ LA SLL+    ++  V  ++ + +  HFSKAFK   G
Sbjct: 202 LCRLFKGAYGIGPKEYLLNFRMTLATSLLRNSRTAIKVVGISVGYENQLHFSKAFKQVHG 261

Query: 277 YAPSAVLKNTDQHPTDASP 295
            +P+   +     P +ASP
Sbjct: 262 VSPAQWRQE--NQPDNASP 278


>UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=bacterium Ellin514
           RepID=B9XJ41_9BACT
          Length = 295

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 105/296 (35%), Gaps = 13/296 (4%)

Query: 1   MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN 60
           M  + +      +    +P  I    I + +    L       +Y         +     
Sbjct: 1   MKTREKPEGFVGQRLVVVPRPILAASIKNPLLQHLL--PTDAGYYPTAKGHVCVRRKGCP 58

Query: 61  SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS- 118
             + +Y  +G G   +  G +  +  N ++ +     H Y  +    W  +W     ++ 
Sbjct: 59  EVIFIYCAKGNGWCEIA-GRKHQISKNQLLVINAFTPHVYGADKNSPWTIHWFHAVGSNV 117

Query: 119 ---MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
              +  + V ++  +       Q  +   E++ S E       + +    +   + L+  
Sbjct: 118 SVYLDKLGVTEEKPVVPLGGDVQLFSLFEEVLESLEHGFTPTHLIYAAHSLTHLMGLILR 177

Query: 176 DG-----KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
                   +   R ++   I  +   L++  ++  +AA +  S +     F R TG  P 
Sbjct: 178 HKDEFGYGETSVRERMANSIEFMKGHLREPLNIVTLAALVNLSRSHYSTSFRRVTGYAPL 237

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            Y    R+  A+ LL     S+ E+ D L F D F+FS+AF+    ++PS   +  
Sbjct: 238 SYLNHLRMQRAVQLLNATELSIKEIGDQLGFSDQFYFSRAFRKVHNHSPSEHRRRY 293


>UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D8J8_PAESJ
          Length = 294

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 87/256 (33%), Gaps = 18/256 (7%)

Query: 49  WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVW 107
            P  K  P + N  +      G G    +  ++  L    I  + P  + +Y  +    W
Sbjct: 34  RPLHKVGPAVYNYTLIHSIDHGFGTFEWQ-RKKYHLGKGDIFVIFPGVLFNYEADKAEPW 92

Query: 108 EQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI-- 165
              W+     ++ ++       I N  +   +   +A +  + E      +   +T +  
Sbjct: 93  SYRWVALQGRNVTEMLENVGVTITNPIVRGADSANLASIFETIEQELELKSGETITSLAT 152

Query: 166 ---IYQWICLMYADGKKD----------PQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
                  +                       R +E+ I           S+  +A ++  
Sbjct: 153 DGWFRLLLAEFARLNTNKLHYSSTKVLTDSERLVEQAIRWFQTQYMLPISIEKLATSLGY 212

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
                 ++F + T  +PK+Y    R++ A  LL     S+ +V ++  F D  +FSK FK
Sbjct: 213 HRTHFTKVFKQLTSLSPKQYINQVRMERARELL-NTNISIEQVGNSCGFTDPLYFSKQFK 271

Query: 273 HKFGYAPSAVLKNTDQ 288
              G +P+   +   +
Sbjct: 272 KWTGTSPTQYREELKR 287


>UniRef50_C6BAA0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae
           RepID=C6BAA0_RHILS
          Length = 288

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 96/268 (35%), Gaps = 9/268 (3%)

Query: 27  ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLK-NGEQITLH 85
           IS+G + I     Y    +         +  I +++  V    G G++        +T+ 
Sbjct: 22  ISTGYTEIGPNSDYPPSRHPDDHHFSWSRGRILSAYQIVQISAGSGRLEFGPERRPVTIA 81

Query: 86  GNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMM-----DIPVGQQSVIYNGEIYNQE 139
              I  L P   H +  +    W ++W+E   ++        +   +     +    +  
Sbjct: 82  EGSIFLLFPGVWHRFAPDRRTGWVEHWIECRGSAFDFARDAGLLRPELPAHASSSEISGV 141

Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ 199
              +  L          L      +++        AD   +   R +++    L     Q
Sbjct: 142 FASIHALAQDDCLRNQPLLSTLGLQLLALICR--PADLNTNAVNRLVDRARMVLMERCGQ 199

Query: 200 RWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTL 259
             SV  +A  +  S  + RRLF   TG + K+Y +  RL  A+ LL     S+ E+A  L
Sbjct: 200 PLSVEQLADELGVSYPYFRRLFREQTGMSAKQYQMRVRLQRAIDLLVNTDKSIKEIAGLL 259

Query: 260 NFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
            F  +FHFS  F+   G +P+       
Sbjct: 260 GFHSAFHFSTQFRQLIGSSPTDFRAAKR 287


>UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria
           RepID=A8SGH8_9FIRM
          Length = 288

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 89/251 (35%), Gaps = 12/251 (4%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFT 115
              +     Y + G G+  L  G+   +  + ++ + P   H+         E   +   
Sbjct: 37  HTHSCTELFYCLSGEGQFYLA-GQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVA 95

Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELI--------TSPEAIKNNLAVAFLTKIIY 167
               +         I+N     + +  +  ++           E +  +L    L  ++ 
Sbjct: 96  SMEFLFSKADTNYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVR 155

Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
                +  +     + R+  ++   L  + ++  S+  +A     ++ +L   F R  G 
Sbjct: 156 CTTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDLLAELAHLNKYYLAHTFQREYGI 215

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +P  Y    R++ +  +L   G S+ ++++ + F    +FS+ F+   G  P+   + T 
Sbjct: 216 SPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGMTPNEYRRQTR 275

Query: 288 Q--HPTDASPH 296
           Q   P     H
Sbjct: 276 QGKRPAPTKRH 286


>UniRef50_UPI00017450D3 transcriptional regulator, AraC family protein n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI00017450D3
          Length = 285

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 93/284 (32%), Gaps = 10/284 (3%)

Query: 20  LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNG 79
             +     +   ++ +  +T     +         +         VY ++G G + +  G
Sbjct: 3   RFVRSYFHTERDAVRASLYTTVRAGHLTADKTHHIERETLAGHELVYCLRGSGTVRVA-G 61

Query: 80  EQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPT------SMMDIPVGQQSVIYN 132
               +    + ++     H Y  +    WE YW+           S++ I       + +
Sbjct: 62  RVHRVKARGLYWVSCWHPHQYQADPIQPWELYWVRIEGPGLDALASLLRIRETPVFPLLD 121

Query: 133 GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD--PQRRQIEKLI 190
                    +   ++ SP           + +++       + DG +D  P    +E+ +
Sbjct: 122 DAATKACFMDAFNILESPSPNAPASMHVAVARLLSLLYENRFKDGGQDTEPVPSTLERPL 181

Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250
             +         ++D+A     S +   R F R  G +P ++    R++ A   L     
Sbjct: 182 IRMRQHYADALRLSDLAHLAGMSVSHFIRTFKRTMGTSPIDWLRRERMNQAKHRLIDTDE 241

Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294
            + E+A    + D + FSK FK   G  P+           + S
Sbjct: 242 PIKEIARQCGYRDPYFFSKDFKKLTGLPPTDYRVQERGRAHETS 285


>UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR
           n=1 Tax=Bryantella formatexigens DSM 14469
           RepID=C6LM61_9FIRM
          Length = 252

 Score =  201 bits (511), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 17/238 (7%)

Query: 67  TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVG 125
             +G G + +      TL    +  +       Y  +    W   W+ F   S  +    
Sbjct: 2   VQEGRGYLEMGEA-HYTLEKGDVFLIPEGVEAWYEADKETPWSYRWIGFEGVSARECLES 60

Query: 126 QQSVIYNGEI----------YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM-- 173
                               Y  ++ +  +L    E  +N L +    ++I      +  
Sbjct: 61  AGFTPQKPVRKVRCLDKVGGYIDQMLKCHQLYYENELKRNALLMLVFAELITDNRKNLAG 120

Query: 174 ---YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
              Y    + P    +E  I  ++ +  +R  + ++A  I  + ++L   F    G +P+
Sbjct: 121 MGKYPSEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQENIGCSPR 180

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           EY +  R++ A +LLK     V EVA  + + D   FSK FK + G +P    +   +
Sbjct: 181 EYLMKLRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYKEEKSR 238


>UniRef50_C2EDY7 AraC family transcriptional regulator n=2 Tax=Lactobacillus
           RepID=C2EDY7_9LACO
          Length = 284

 Score =  200 bits (510), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 99/255 (38%), Gaps = 10/255 (3%)

Query: 40  YADEHYRVIWPRDKKKPL-IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98
                     P    K   I  ++V  Y  +GCG         + L       L      
Sbjct: 27  IIFYGLECCEPNYIFKGNNIRENYVIHYIRKGCGTFSSAGRPVVELKQGDCFILPKGVPC 86

Query: 99  SYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYN------GEIYNQELTEVAELITSPE 151
            Y  +    WE  W+  +     +I         N         +   L+ + E +    
Sbjct: 87  FYQADEKDPWEYSWIGLSGIRTGEIFAASSISEKNYLCQIQDTEFKNSLSRLYESLHLTH 146

Query: 152 AIKNNLA-VAFLTKIIYQWICLMYAD-GKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209
            +KN+L   + L K+ +  +    A+  +K   R Q    +  +  +     S+ D+   
Sbjct: 147 NMKNSLLTESLLYKMFHDLLDEFPAEVTRKTNSRTQFRLAVEYMRDNYDTGCSILDVCRG 206

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
           +  S ++L  LF ++ G +P+++  + R++ A  LLK    S+  +AD++ + DSF FSK
Sbjct: 207 LSVSRSYLYSLFKKFAGSSPQKFLTEIRMEEAEHLLKDTDRSIQNIADSIGYGDSFTFSK 266

Query: 270 AFKHKFGYAPSAVLK 284
           AF+   G +P+   +
Sbjct: 267 AFRKSRGCSPTDFRR 281


>UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein, putative n=1
           Tax=Streptococcus sanguinis SK36 RepID=A3CL13_STRSV
          Length = 282

 Score =  200 bits (510), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 96/256 (37%), Gaps = 11/256 (4%)

Query: 39  TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98
            +A   Y          P + + +V    ++G G   + N ++  L       + P    
Sbjct: 19  FFAFCGYSKTEAHHSFGPAVRDVYVIHIVLEGRGTYSVGN-QRYDLQEGQGFVVPPGQSV 77

Query: 99  SYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNN- 156
            Y  +    W   WM      +                    L E   L+    A + + 
Sbjct: 78  FYQADREEPWSYVWMGLGGRLLPRYLQDLGLQSGQWSFELTSLQEFKALVFESLAYEGSG 137

Query: 157 -LAVAFLTKIIYQWICLMYADGKKDPQ-------RRQIEKLIATLHASLQQRWSVADMAA 208
             A   L + +Y+++ L+    K+             +++++  L + L +  SV ++A 
Sbjct: 138 ITAELALQRQVYRFLELLSQRLKQTSLITESRRVNPYVQQVLELLSSHLPESLSVQELAQ 197

Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268
            +    ++L RLF    GK  KEY  D RL++A  LL     SV E+A+   F  +  FS
Sbjct: 198 KLALHPSYLSRLFKDEVGKGIKEYSNDLRLNMAADLLTGSQLSVEEIANKTGFAGTQSFS 257

Query: 269 KAFKHKFGYAPSAVLK 284
           KAFK   G +P    K
Sbjct: 258 KAFKKARGQSPLNFRK 273


>UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella
           multacida DSM 20544 RepID=C9KN80_9FIRM
          Length = 285

 Score =  200 bits (508), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 100/257 (38%), Gaps = 10/257 (3%)

Query: 49  WPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VW 107
            P     P + +  +  Y  +G  K  + NG    L      F+ P     Y  +G   W
Sbjct: 28  MPGQVCGPRVRSYCLLHYITKGKCKFQV-NGMTYHLQAGQGFFIAPDFETRYETDGDEPW 86

Query: 108 EQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAI--KNNLAVAF 161
              W+      M  +     + Q + I++    ++ +  V +++   +     +   ++ 
Sbjct: 87  NYIWVGAAGEEMKHLMHVLGLSQANPIFSCHQGDRLVHCVRDMLQHRQMTMTDHYFRMST 146

Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
           L + I         +         I  ++  +   L +  S A++AAT+  + ++L  LF
Sbjct: 147 LYRFIAILSEERQVNQPLASVNSYIANVMTYVRHHLHEHMSTAEIAATMNLNRSYLSSLF 206

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
              TG T + Y    R+  A  LL+    S+  +A++  +  S   ++ F+  +G +P+ 
Sbjct: 207 RSQTGMTLRSYIQLCRMTRAKYLLESTHLSIASIAESCGYEKSDSLNRTFRKTYGISPAD 266

Query: 282 VLKN--TDQHPTDASPH 296
             K+   DQ  +   PH
Sbjct: 267 YRKSFLADQTQSSRKPH 283


>UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae
           RepID=C7H5Z6_9FIRM
          Length = 319

 Score =  200 bits (508), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 92/251 (36%), Gaps = 12/251 (4%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFT 115
              +     Y + G G+ LL +G+   +  + ++ + P   H+         E   +  +
Sbjct: 68  HTHSCTELFYCLSGEGQFLL-SGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVS 126

Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELI--------TSPEAIKNNLAVAFLTKIIY 167
              ++         I+N     + +  +  ++           E +  +L    L  ++ 
Sbjct: 127 GIEILFGKADSTYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVR 186

Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
                +  +       R+  ++   L  + ++  S+  +A     ++ +L   F +  G 
Sbjct: 187 CTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDTLAEVAHINKYYLAHTFQKAYGI 246

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +P  Y    R++ +  +L   G S+ ++++ + F    +FS+ F+   G  P+   +   
Sbjct: 247 SPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGLTPNEYRRQVR 306

Query: 288 --QHPTDASPH 296
             Q P  A  H
Sbjct: 307 QGQRPAPAKRH 317


>UniRef50_C9AKD6 AraC-type DNA-binding domain-containing protein n=3
           Tax=Enterococcus faecium RepID=C9AKD6_ENTFC
          Length = 286

 Score =  199 bits (507), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 95/254 (37%), Gaps = 11/254 (4%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             Y    PR    P I   ++    ++G G   + N ++  L       + P     Y  
Sbjct: 25  CGYSKTEPRHSFGPAIREQYLIHILLEGEGYYSI-NDQKYFLKKGQGFVIPPGVSTFYQA 83

Query: 103 E-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPE-----A 152
           +    W   W+  +       + +I VG+  + +  E  N     + E ++  +      
Sbjct: 84  DEKNPWSYVWLGLSGNLVEYYLKEIGVGKNHLTFKVENLNSFKGLIFETLSYDQDNLVSE 143

Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
           +     V    +++      +            + + I  +  +  Q+ SV D+A ++  
Sbjct: 144 LSRQKQVYKFLELLLNSASYLNEGIITKKMNPFVRQTIEIIRENAYQKLSVKDIAVSLSI 203

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
            E +L RLF    G + KEY  + ++ +A  LL     S+ +++D + F     FSKAFK
Sbjct: 204 HENYLSRLFKNDMGISIKEYISEIKISIANDLLSSTEYSIQQISDKIGFSTVQSFSKAFK 263

Query: 273 HKFGYAPSAVLKNT 286
              G +P    K  
Sbjct: 264 KANGVSPGVYRKRR 277


>UniRef50_A8YTU0 Msm operon regulatory protein n=3 Tax=Lactobacillales
           RepID=A8YTU0_LACH4
          Length = 283

 Score =  199 bits (507), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 84/254 (33%), Gaps = 9/254 (3%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH 101
           +       P     P         +  +G G + ++ G    +H N    +   ++  Y 
Sbjct: 27  NCGVEYCNPGWSYGPKRREYHFIHFVKEGKGTLTIE-GHTFHIHKNQCFIVPAGEVSLYA 85

Query: 102 CEG-LVWEQYWMEFTPTSMMDI------PVGQQSVIYNGEIYNQELTEVAELITSPEAIK 154
            +    W+  W+ F                     I +  +Y Q++ ++  L     +  
Sbjct: 86  ADKKDPWKYSWIGFLGIESSRYVQQLISNNNFVIDIKDAVLYEQQIRKIISLKHDSLSSA 145

Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
                    +I    I  +    +         +    +  +      + D+A  +  + 
Sbjct: 146 -LKMTGITYEIFGSLIDEVNDTEEVKTTNSLATRAKHYMDLNYYDAIKIKDIANFLNVNV 204

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
             L   F      +PK+Y +  ++  A  LL    N++  VA+++ F DS  FSK FK  
Sbjct: 205 NCLSSAFKEEFNLSPKQYLMKLKIRKAKKLLSTTNNTITVVANSVGFNDSLAFSKVFKQY 264

Query: 275 FGYAPSAVLKNTDQ 288
              +PS+  K   +
Sbjct: 265 TQSSPSSYRKQATE 278


>UniRef50_B0MEA0 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
           14662 RepID=B0MEA0_9FIRM
          Length = 292

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 94/270 (34%), Gaps = 29/270 (10%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
              +   P     P + +  +  Y V G G     + +Q T+       + P ++  Y  
Sbjct: 20  CGIQECTPLYSFGPAVRSHHLLHYCVSGKGYYYAGD-KQYTIEPGDAFLILPDEVTFYQA 78

Query: 103 EG-LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNN- 156
           +    W   W+ F+   + D      +  + +I + E     ++ + +++       +N 
Sbjct: 79  DEQDPWTYLWVGFSGNQVNDYLQRCGLDSEHLICHCEEKELLVSYIEDILRHNTLSYSNE 138

Query: 157 -LAVAFLTKIIYQWICLMYADGKKD--PQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
                 L  I   +        K D   +   I K I  +  + Q   +V D+A  +  +
Sbjct: 139 IYIQGILFLIFASFSRSADIKYKSDFTSENIHISKAIEFIQKNYQNVITVRDIADYVSLN 198

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            ++L  +F      +P+++ L  R+  A  LL      V  ++ +  + +   FSKAFK 
Sbjct: 199 RSYLCSMFQENLHMSPQQFLLRFRVTKATELLSDTDLPVKNISYSCGYANQLAFSKAFKK 258

Query: 274 -------------------KFGYAPSAVLK 284
                                G+ PS   K
Sbjct: 259 NYRFKSHGLPQRKPECSEYYTGFRPSQSRK 288


>UniRef50_B8FW52 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium
           hafniense RepID=B8FW52_DESHD
          Length = 282

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/289 (19%), Positives = 113/289 (39%), Gaps = 23/289 (7%)

Query: 3   GKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW 62
           G L+ S+    TP N+   +   +I +G         + D++Y V   +         S+
Sbjct: 7   GVLEGSEYYFFTPSNLAKSLFFYLICTG-------KFFCDQNYNVEREKYS-------SY 52

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDI 122
           + ++ V+G G +   N    T   N +I L   + H Y+     W   W+ +      ++
Sbjct: 53  LLMFVVKGQGTV-CYNDRIYTAKENDLIILNCHNPHRYYTNTE-WTTLWLHYDGNISKEL 110

Query: 123 P------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA- 175
                   G    + N  I  + L  + E   +   +   L   ++ +++ + + L    
Sbjct: 111 FDLIYDRFGCVISLSNLLIIPKYLNRILEDARAGSPLSEPLMSCYIQRMLSELLMLSDDF 170

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
              +  +   + + IA +  + +++ S+  +A+ +  S     R F + TG +P EY + 
Sbjct: 171 ILPESDKSDPVLEAIAFIETNFKEKLSLKVIASHVNMSSFHFARTFKKDTGYSPYEYVVK 230

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            RL+ A  LLK+    + E+A    F    +F   F +  G  P     
Sbjct: 231 TRLNHAKMLLKKTNLQIKEIAAECGFSTESNFVVNFHNNIGVTPGEFRN 279


>UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=Clostridium hathewayi DSM
           13479 RepID=UPI0001C368B4
          Length = 289

 Score =  198 bits (505), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 11/242 (4%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYW 111
             +      +  +Y   G  +  + NG  +T+    ++   P +   Y +      E +W
Sbjct: 40  TIRATGRPDYQLLYIASGKAEF-VLNGAAVTIPAGNMVLYGPGEYQQYTYLLEDRPEVFW 98

Query: 112 MEFTPTSMMDIPVGQQSVIYNGEI--------YNQELTEVAELITSPEAIKNNLAVAFLT 163
           + FT     D+       + +  I        Y      +   +  P  +  + +  +  
Sbjct: 99  VHFTGYEAADLLSRTGLSLEDFRILRTGCASRYQDLFLSMIRELQLPRPLSGDFSSLYFK 158

Query: 164 KIIYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFL 222
           +++      +   GK  PQ ++++E  +   H +      ++D AA++  S  W  R F 
Sbjct: 159 ELLLTVERQIAEGGKNKPQIQKEMEHAVHFFHENFSADIDISDYAASLHMSTCWFIRSFK 218

Query: 223 RYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282
           +Y G  P +Y    R++ A  LL+     V E+   + + +  +FS+ FK + G +P+A 
Sbjct: 219 QYVGVPPLQYLTSIRINKAKELLESTDCPVSEIGSIIGYENPLYFSRIFKKQTGLSPAAY 278

Query: 283 LK 284
            K
Sbjct: 279 RK 280


>UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CVZ4_PAESJ
          Length = 288

 Score =  198 bits (505), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 99/265 (37%), Gaps = 22/265 (8%)

Query: 30  GISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCI 89
           G+  +      A  +Y V        P +   +   + + G   +    GE + L    +
Sbjct: 24  GLWPLRTGRNIAKANYSV-------GPRVIECFSFHFVLNGSVTLSSM-GETVILPKGSM 75

Query: 90  IFLKPMDIHSY----HCEGLVWEQYWMEFTPTSMM----DIPVGQQSVIYNGEIYNQE-- 139
             L P   HSY    +      + +W+ FT +        I + +        +  +   
Sbjct: 76  FCLFPDVKHSYWITQYDSASPLKMHWLAFTGSQAEMLVRRIGLTEHKPYLRSRLTTELAN 135

Query: 140 -LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQ 198
            L    E + + +   +      L ++       +    +   ++  ++  +  +     
Sbjct: 136 QLQACMERMKNWQKDGDLQLQMMLYQLFEMLSRPLP---EASEEKDWLKACLQYMQTHYA 192

Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADT 258
           +  SV D+A       + L   F +  G +P+EY +  R++ A+ +L+ +  S+ +++ +
Sbjct: 193 EGISVTDLAEWSGMHRSHLSSRFKQSFGISPREYLIMLRMERAVEMLQSRTLSITDISLS 252

Query: 259 LNFFDSFHFSKAFKHKFGYAPSAVL 283
           L + D + FS+AF    G +PS   
Sbjct: 253 LGYTDLYTFSRAFSTYTGMSPSNYR 277


>UniRef50_A5ZSJ3 Putative uncharacterized protein n=4 Tax=Clostridiales
           RepID=A5ZSJ3_9FIRM
          Length = 287

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 101/261 (38%), Gaps = 16/261 (6%)

Query: 42  DEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL---KNGEQITLHGNCIIFLKPMDIH 98
              Y    P     P + N ++  Y + G G + +    +     +  +    ++P  I+
Sbjct: 25  QYGYEKCEPLHSYGPFVRNHYLFHYIISGKGMLSVTEKDDNAVYHMEAHSGFLIEPGRIN 84

Query: 99  SYHCEGL-VWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAI 153
            Y  +    WE  W+EF      ++     +     +++  I +    ++ + +      
Sbjct: 85  LYSADQKFPWEYVWVEFDGLRAKELMEEAGLSNDHPVFH-PISDTAADKLRDEMLRLTQY 143

Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDP-------QRRQIEKLIATLHASLQQRWSVADM 206
            +N     +   +Y  +  +                R   ++ ++ +  +     +V DM
Sbjct: 144 PDNSRPLGIIGQLYLIMDALIQGSSNKKRLQGGKLSRFYAQEALSFIEQNYALPITVEDM 203

Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266
           A       ++  ++F    G++P+++ +  R+  A SLL     S+G+++  + + +  H
Sbjct: 204 ANRCNLDRSYFGKVFKDMIGQSPQDFLIRYRMSKATSLLTSTSLSIGDISVQVGYPNQLH 263

Query: 267 FSKAFKHKFGYAPSAVLKNTD 287
           FS+AF++ +G +P    +   
Sbjct: 264 FSRAFRNIYGMSPRQYRQQNK 284


>UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
           RepID=A7VRD3_9CLOT
          Length = 277

 Score =  197 bits (502), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 95/244 (38%), Gaps = 11/244 (4%)

Query: 50  PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWE 108
           P         +    +Y   G G+  +  G++  L    ++ + P  +H    +      
Sbjct: 31  PNWFNIQHSHDFCEILYVAGGAGE-AILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPLR 89

Query: 109 QYWMEFT-----PTSMMDIPVGQQSVIYNGEIYNQE---LTEVAELITSPEAIKNNLAVA 160
             ++              +   +  V+  GE   +    L E+ +  +S       ++  
Sbjct: 90  LIFLAIRDFAVPGLPAGCLSQEKYRVLSCGEYRYKMDIYLRELLQETSSQIEFYQEISQG 149

Query: 161 FLTKIIYQWICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
            ++ ++   + L+  + + +    ++ +K+   L  +     ++  ++ T+  S+ +L  
Sbjct: 150 LVSALLVLVMRLIRINPEDEAALSQECQKIKEYLDQNFTSPITLDSLSETVYISKHYLSH 209

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           LF   TG +P +Y    R++ A  LL +    V EV+  + + +  +FS+ FK  +G +P
Sbjct: 210 LFKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISP 269

Query: 280 SAVL 283
               
Sbjct: 270 VKYR 273


>UniRef50_A0Y944 Transcriptional regulator, AraC family protein n=1 Tax=marine gamma
           proteobacterium HTCC2143 RepID=A0Y944_9GAMM
          Length = 272

 Score =  197 bits (501), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 19/280 (6%)

Query: 18  IPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLK 77
           +   + +N ++      S  +    + ++++              + +Y   G G +   
Sbjct: 1   MLDHLRQNPLTRACYPTSFGYYPYAKGHQMLRDDHS-------DNLLIYCEDGNGHVKTD 53

Query: 78  NGEQI-TLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQQS------- 128
             +    +    +I L     H Y   +   W  YW+ F       +             
Sbjct: 54  --KFYGPVTKGDVILLPSGHAHHYWASDDNPWTIYWVHFDGLQANQLIKELDFDAEQVVA 111

Query: 129 VIYNGEIYNQELTEVAELITS-PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIE 187
            I    +   +   +  L  S       N A A   +I+Y     + +          ++
Sbjct: 112 SIGQQPLLASDFNRLLSLRQSGYRQTVFNYAAALTRQILYFLALQIRSSNTLRRHNFNLD 171

Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247
           +L + +  +++    +  MAA    S       + + TG +P ++++  +++ A  LL  
Sbjct: 172 ELRSLMLENIEGDLDLDTMAACAQLSRHHFADKYKKLTGISPVKHFIHLKMERACYLLDT 231

Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
             NS  +V+  L + D  +FS+ FK   G +PSA  K   
Sbjct: 232 SNNSAKQVSAHLGYTDPLYFSRLFKKVIGISPSAYRKGLR 271


>UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecalibacterium
           prausnitzii M21/2 RepID=A8S939_9FIRM
          Length = 291

 Score =  196 bits (499), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 104/282 (36%), Gaps = 10/282 (3%)

Query: 19  PLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKN 78
           P  + +    S   L   ++      +         +     S++  YT++G G I    
Sbjct: 10  PESVWKRTTPSEAELAQPYYCTEAGVFYAQQHFSTAR-TDKESYILFYTLRGAGLIEQGE 68

Query: 79  GEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWMEFTPT--SMMDIPVGQQSVIYNGE 134
              + L     + L      SY        W  YW+       + M+  +     +   +
Sbjct: 69  S-HVVLSTGQALLLNCRTPQSYCTAPGQSCWHHYWVHLDGAGVAAMEPLLLPGKKLTPVQ 127

Query: 135 IYNQELTEVAELITSPEAIKNNLAV----AFLTKIIYQWICLMYADGKKDPQRRQIEKLI 190
           +   ++ E  E++          ++      L +++      + A  +    R+ I +  
Sbjct: 128 LTGVKMQEYFEMLLGQMEHSTVDSMVTTGLALHEMLALCARSILAQAEATSARQVILQAA 187

Query: 191 ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGN 250
            TL  + Q+   +AD+ A    S+++  RLF RY G TP  Y ++ R+  A  LL    +
Sbjct: 188 ETLSKNYQKELYLADLLAEAHMSKSYFLRLFRRYMGTTPYNYLVNFRITQAKELLVLTDH 247

Query: 251 SVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTD 292
           SV E+A  + F D+ +FS  F    G +P    K   +    
Sbjct: 248 SVSEIAQEVGFGDASNFSTRFAKATGQSPLQYRKRALKPQEG 289


>UniRef50_D2Q7T6 AraC-type transcriptional regulator n=2 Tax=Bifidobacterium dentium
           RepID=D2Q7T6_9BIFI
          Length = 292

 Score =  196 bits (499), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 88/290 (30%), Gaps = 17/290 (5%)

Query: 10  VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69
           +++   Y +P         +     +   ++A        P     P + +  +    + 
Sbjct: 1   MEHAQVYTLPSFCPFTSGHTDPPSSANGVSFAFCGISRTEPGHDVGPALRDHTIIHLVLS 60

Query: 70  GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDIPVGQQS 128
           G G++  + G    L  +    ++P    +Y       W   W+            G   
Sbjct: 61  GSGELHSQ-GAVFRLKAHDGFIIRPDSPVTYQACATDPWTYLWLGLGGNGAQRCLAGIGL 119

Query: 129 VIYNGEIYNQELTEVAELITSP----------EAIKNNLAVAFLTKIIYQWICLMYADGK 178
                  +  + +    LI S           E   N + + FL ++         A  +
Sbjct: 120 AHDRNAFHVGDTSAFLALIQSCFDYTSGSFADEIKLNAITLEFLHRLALAMATAGGATTQ 179

Query: 179 KDPQRRQIEKLI-----ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233
             P        +       +     +  +V  +A  +    + L R F   TG T K+Y 
Sbjct: 180 SRPDDAGAGGALATAAAQYVAEHYAESINVGRVAEALHTDRSHLSRRFKSATGLTLKDYI 239

Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            + R+  A  LL      V +VA    F     FS+ FK     +P+   
Sbjct: 240 DNIRIAKACDLLSMTDMEVAQVARACGFSSLEVFSRKFKMARSVSPARFR 289


>UniRef50_B0MNH5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM
           15702 RepID=B0MNH5_9FIRM
          Length = 295

 Score =  196 bits (499), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 85/253 (33%), Gaps = 7/253 (2%)

Query: 39  TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98
            Y     R       K+     S   +YT +GCG + + N  +  L  N  ++L P   H
Sbjct: 39  FYLLGIGRTSPEFHVKRDKGLTSHQFLYTAKGCGVLEVGN-RKYKLEKNSFMYLPPELPH 97

Query: 99  SYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIY------NGEIYNQELTEVAELITSPEA 152
            Y+ E   W   WM F    +  I               +   + +    +  L      
Sbjct: 98  EYYPENDEWNTCWMVFRGDFLKGIMNTMGFSGEMVATNADLNAFKKIFGRIYSLAADNLH 157

Query: 153 IKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
                ++     ++           + +      +  +  ++       +++++A     
Sbjct: 158 NGEKCSLLIYNAVLAAKEIFGGKQEENNTGNLIADNAVRYINEHYSDDITLSELACLSGV 217

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           S  +  R+F       P EY    ++  A S+L     SV +++ +L +    +F   FK
Sbjct: 218 SPQYFDRIFRERLNMRPMEYIARVKISKAKSMLLDSDISVTQLSKSLGYTGPTYFGIVFK 277

Query: 273 HKFGYAPSAVLKN 285
              G +PS   KN
Sbjct: 278 KYEGISPSEFRKN 290


>UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=Subdoligranulum
           variabile DSM 15176 RepID=D1PN84_9FIRM
          Length = 297

 Score =  196 bits (498), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 88/255 (34%), Gaps = 9/255 (3%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
            Y    P     P+     +  + + G G + + +G    L       +    I  Y  +
Sbjct: 44  GYEACAPGHHYGPIYRAYQLIHFILSGKGVLEI-DGHTFQLGAGDAFLIPSGKIAYYAAD 102

Query: 104 GL-VWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLA 158
               W   W+ F   +       +            +  Q+   + E I S E       
Sbjct: 103 AADPWCYTWINFLGINSQMYTYQLIASSPEPYILRGLDTQKYHALIEQILSLEGTATARY 162

Query: 159 ---VAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
                 L +++ +       D +   +    ++    L  +  ++  + ++A  +     
Sbjct: 163 FKGNGLLLQVLGELFQDAGFDERYWGKNSVADETKFYLDVNYSEKLKLKEVAHNLGVHPN 222

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           +L R+F    G TPK+Y L+ +L  A  LL+     V  +A ++ F D   FSK FK  +
Sbjct: 223 YLTRVFHEKYGVTPKQYLLNLKLQKACQLLRTTDLPVAVIAGSMGFDDGMAFSKLFKKTY 282

Query: 276 GYAPSAVLKNTDQHP 290
             APS   +     P
Sbjct: 283 SCAPSDYRRKEKAAP 297


>UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=Leuconostoc
           mesenteroides RepID=Q03WL4_LEUMM
          Length = 309

 Score =  196 bits (498), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 95/263 (36%), Gaps = 15/263 (5%)

Query: 39  TYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH 98
            +        +      PL  + ++  + ++G G     N +  TL       ++P +  
Sbjct: 19  FFDFSGVSKTFSGHASGPLKRSHYLLHFVLEGQGTYFTMNHK-YTLKAGDFFLIRPDETI 77

Query: 99  SYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYN-----QELTEVAE--LITSP 150
            Y  +    W   W+    T    +         + + ++       L  + E   +TS 
Sbjct: 78  FYQADLNNPWHYAWISIGGTETAQLIENFSPFRNHHDTFSCATVENYLKLIVESLTLTSH 137

Query: 151 EAIKNNLAVAFLTKIIYQWICL------MYADGKKDPQRRQIEKLIATLHASLQQRWSVA 204
                       ++I+   +         + +    P     +  +A ++ +     S+ 
Sbjct: 138 RPQTELRLNQIASEILLLLMKENTWNVVEHQNATIRPMSEYTKLSLAYINNNFTYDTSIT 197

Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264
           D+A  I  + ++L RLF R  G +PK++ L  R++ A  LL+    S+ ++++ + F + 
Sbjct: 198 DIADAIKINRSYLSRLFRRDVGISPKKFLLRLRINEACQLLQTTQLSINQISEKVGFSNP 257

Query: 265 FHFSKAFKHKFGYAPSAVLKNTD 287
             F  +F       PSA  K   
Sbjct: 258 SVFGHSFTELIHETPSAYRKRRS 280


>UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales
           RepID=C9LA22_RUMHA
          Length = 277

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 87/241 (36%), Gaps = 13/241 (5%)

Query: 59  ANSW--VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFT 115
            + +     +  +G G   ++ G+QI +  N +I + P   H+ +  +   WE   +   
Sbjct: 37  HSHYFSELFFVTKGTGYFQIE-GKQIPVQKNDLILINPNIPHTEFGNKEQPWEYIALGIE 95

Query: 116 PTSMM------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW 169
                             S+          L+ + + I + +     +    L  I+   
Sbjct: 96  GVQFQYSEKEAPYSYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQTICQNLLELILLSV 155

Query: 170 ICLMYAD---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226
                 +     +    R+   +   ++    +  ++  ++A +  ++ +L   F  Y G
Sbjct: 156 ARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTLSALVHINKYYLVHAFKNYKG 215

Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            +P  Y +  R++ A  LL+    SV ++ +   F    +FS+ F+   G  P+A  K  
Sbjct: 216 VSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRLTGTTPNAYRKKK 275

Query: 287 D 287
            
Sbjct: 276 K 276


>UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivorax
           RepID=Q0VT12_ALCBS
          Length = 305

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 109/295 (36%), Gaps = 18/295 (6%)

Query: 5   LQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVA 64
           L +   +   P ++   + ++ + SG     +        +R+    ++++P      + 
Sbjct: 19  LPARGQRTVIPPSVLSSVRDHPLCSGCMPHGVGFYPQASGHRM----ERQRPA---DNLL 71

Query: 65  VYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP 123
           +Y V G G++    G+   +    ++ L     H YH      W  YW+      +    
Sbjct: 72  IYCVSGAGELAYG-GQSQPVEAGDLLLLPAGFSHRYHANPQQPWSIYWVHLGGHEVQRYF 130

Query: 124 -----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC---LMYA 175
                     +       +  L E  + + +         + +   ++   +    LM  
Sbjct: 131 DEIAGQPDGGIRRVRVGVHSRLAEDFQALMAAATNAQPEHLVYAANLLRSLLAYASLMRR 190

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADM-AATIPCSEAWLRRLFLRYTGKTPKEYYL 234
             +       + ++ + L  ++ +R S+ D+  AT   S     R + R TG+TP + + 
Sbjct: 191 QHQVRHATLDVTRVNSYLQTAIDRRLSLDDLITATSDLSRYHFIREYKRQTGQTPMQAFQ 250

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
             ++  A  LL    +SV  +A  L   D ++FS+ FK   G +P    K   ++
Sbjct: 251 RIKVSHACYLLDISDDSVATIALQLGHDDPYYFSRLFKKMMGISPQKYRKERGKN 305


>UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=Bacillus
           cellulosilyticus DSM 2522 RepID=D2LYQ6_BACS4
          Length = 294

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 61/290 (21%), Positives = 118/290 (40%), Gaps = 15/290 (5%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
            S ++ NET   I    +E VI + + +  +   Y   H    +  D  K    N+++  
Sbjct: 3   HSLNLPNET---IGFRTHEKVIGTLVDIHVVGKQYVHSH---DYYWDGMKRNDKNTFIFQ 56

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLK-PMDIHSYHCE-GLVWEQYWMEFTPTSMMD-- 121
           YT+ G G + ++ G+   +       L+ P +   Y       WE  ++     +  D  
Sbjct: 57  YTLSGEGAVFIE-GKTHKVQQGQGFMLEVPGEHIYYLPSHSHHWEFIFLTLRGQAAADCW 115

Query: 122 -IPVGQQSVIYNGEIYNQELTEV---AELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177
                +   I N  I +  + +V    EL      I +  A +   + + +      +  
Sbjct: 116 RYVNRKVGPIINIPIESALIEQVVNVYELAFKKNLIDHYFASSKAYQFVMECYRYFKSFK 175

Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
            K+     I + I  ++ + +  +SV D+A  I  S+ +  +LF      TP +Y    R
Sbjct: 176 AKEQMPDTITQAINFINKNYKASFSVQDVATNINLSKYYFIKLFKESMNMTPGQYITKVR 235

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           L+ A++LL     +V E+A  + + D  +F+KAF+   G +P    ++  
Sbjct: 236 LEQAINLLSHTELTVKEIAMQVGYGDDNYFNKAFRKVVGTSPGEFRRSKH 285


>UniRef50_C6D1A4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D1A4_PAESJ
          Length = 284

 Score =  195 bits (497), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 54/269 (20%), Positives = 100/269 (37%), Gaps = 12/269 (4%)

Query: 31  ISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCII 90
           I     +      +Y        ++P  +  W+ +YTV G G++   N   +T     I 
Sbjct: 10  IYNERPYGILIAGYYNETADYAIQRPSGSRDWLLMYTVSGEGQVQKNNQSTVTCGAGDIA 69

Query: 91  FLKPMDIHSYHCEGLVWEQYWMEFTPTS----MMDIPVGQQSVIYNG----EIYNQELTE 142
            L P   H Y  +G  WE  W+ F P       + +P   + + +      +  +     
Sbjct: 70  VLMPGIPHHYGTKGTSWEFIWVHFIPDPEWSTWLRLPGSDERLFFRHVGKGDSRDSIHEA 129

Query: 143 VAELITSPEAIKNNLAVAFLTKIIYQ----WICLMYADGKKDPQRRQIEKLIATLHASLQ 198
           +A ++    +  ++     L ++  +    +I              +I +++  L  S  
Sbjct: 130 LARMVRHETSAGSSRLHRRLAEMALEETLIYIQQTCPAESAVTMDPRIAQILRELQLSPA 189

Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADT 258
           QR S+ ++A     S + L  LF    G T        RL+ A  LL      + E+A  
Sbjct: 190 QRISLPELAKKSCLSTSRLSHLFKEQVGDTVLNVLCKIRLEKAAQLLTGTNRQITEIASD 249

Query: 259 LNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           + F  + +F++ FK  FG  PS   +   
Sbjct: 250 VGFDCTIYFTRKFKETFGETPSTYRRREQ 278


>UniRef50_B8H8F4 Transcriptional regulator, AraC family n=1 Tax=Arthrobacter
           chlorophenolicus A6 RepID=B8H8F4_ARTCA
          Length = 288

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 111/288 (38%), Gaps = 9/288 (3%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
           +++  +N+    +P  +  + +S  I+   +        +       + +P  A   + +
Sbjct: 3   RATGFQNQRLVVVPRPLVRDALSRPITRHLV--VTDAGVFPAAADHGRHRPDGAAETIVI 60

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLKPM--DIHSYHC-EGLVWEQYWMEFTPTSMMDI 122
             V G G +         +     + L     + H+Y   EG  W  +W       + D+
Sbjct: 61  LCVAGAGWVETGGMRT-AVGAPAAVVLPGGTGEAHAYGAAEGDPWTIWWCHVRGADVPDL 119

Query: 123 PVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK 179
             G   + + +      ++    + E+IT+ E  ++   +     + ++ +  +  D + 
Sbjct: 120 LEGAGVRGAQVIPLVAVDRLTAMLDEIITALEKDQSPARLMATAGMAWRLLTALAIDRRL 179

Query: 180 DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239
             +   +++ +  L   +     +AD+AA +  S ++L +LF   TG     ++   ++ 
Sbjct: 180 PEKGTPLQQAMNYLEERVDGSVRLADLAALVGVSSSYLSKLFREATGGGVLAHHTALKMA 239

Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
            A  LL      + EV   +   D F+FS+ F+   G +PSA      
Sbjct: 240 RARLLLDTTDLPIAEVGREIGLQDQFYFSRQFRRLHGVSPSAYRAERK 287


>UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax=Clostridium
           perfringens RepID=Q0SUX5_CLOPS
          Length = 279

 Score =  195 bits (495), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 101/262 (38%), Gaps = 12/262 (4%)

Query: 41  ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100
            +       P       +  + V  Y  +G G     NG+  TL    I  L       Y
Sbjct: 18  DECGIEQGIPGLGYNYEVLKNAVIHYVTKGYGTFKF-NGKVYTLKQGDIFILLKGMQVEY 76

Query: 101 HCE-GLVWEQYWMEFTPTSMMDIPVGQ---QSVIYNGEIYNQELTEVAELI-----TSPE 151
                  WE YW+ F+ ++  +         S + N +  ++    +  +       +P 
Sbjct: 77  VASIDDPWEYYWIGFSGSNANEYLNRTSITNSCVANCKENSKIPQIILNMCEISKTYNPS 136

Query: 152 AIKNNLAVAFLTKIIYQWICLMYA--DGKKDPQRRQIEKLIATLHASLQQRWSVADMAAT 209
              + L +  L  ++Y  I       + K       I+  +  ++++     +V ++A  
Sbjct: 137 KSDDILLLKELYSLLYTLIEEFPKPFEYKDKELHTYIQDALNFINSNYMHSITVQEIADY 196

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
           +  S ++L ++F++  G +P+ Y ++ R+  A  LLK     +GEVA ++ + DS  FSK
Sbjct: 197 VNLSRSYLYKMFIKNLGISPQRYLINLRMYKATLLLKGTKLPIGEVASSVGYSDSLLFSK 256

Query: 270 AFKHKFGYAPSAVLKNTDQHPT 291
            F   F  +P     N     +
Sbjct: 257 TFSKHFSMSPLNYRNNQVNKTS 278


>UniRef50_B0MR70 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM
           15702 RepID=B0MR70_9FIRM
          Length = 290

 Score =  195 bits (495), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 56/287 (19%), Positives = 101/287 (35%), Gaps = 21/287 (7%)

Query: 21  LINENVISSGISLISLWHTYADEHYRVI------------WPRDKKKPLIANSWVAVYTV 68
           L+  N  S+G  LI  ++ Y                    W          N   A+Y  
Sbjct: 3   LLRYNDFSTGGELILKFYDYPIISKEGSLPVFLVSVGLNEWQYHVICGNGDNYAKALYCT 62

Query: 69  QGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPV---- 124
           +G G + + NGE+  ++     F+     H Y+     W+ +W++ +  S  D+      
Sbjct: 63  KGSGVL-IMNGEKHIINPYTAFFIPAGCPHEYYSTDESWDTHWIKPSGKSCTDMLKALGF 121

Query: 125 --GQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180
              +   +   EI   ++    + E + S +   N  A  +L     +   L        
Sbjct: 122 DKPKIFPLPKEEITYLDRCFRCMHEALLSDKVDGNFRASGYLYSFFIELSRLAAKGKGSV 181

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
                + K IA +  +  ++  +  ++     S   L RLF +     P EY    ++  
Sbjct: 182 QIAPAVTKAIAYIDENYMKQPGLESISKAAGVSSQHLCRLFRQTLNCRPMEYITKRKIQA 241

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           A  LL +   +V ++A+   F DS +F K FK      PS       
Sbjct: 242 AKMLLAETRKTVEQIAEETGFCDSSYFCKIFKRFESITPSQFRNAEQ 288


>UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales
           RepID=C7H3E2_9FIRM
          Length = 306

 Score =  194 bits (494), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 96/242 (39%), Gaps = 12/242 (4%)

Query: 58  IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWEQYWMEFT 115
               +  +Y   G         E++ +    ++  +P +I  Y  + E    E +W+ FT
Sbjct: 64  GRRDYQILYVASGKAHFWFDGVEEV-VTSGHMVLYQPKEIQKYVYYVEDHP-EVFWIHFT 121

Query: 116 PTSMMDIPVGQQSVIYNG-------EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQ 168
              + +I       +            Y     ++   +   E    +   +    I++ 
Sbjct: 122 GYDVKNILNYHGIPLDKHVFYSGTLPDYKMLFRKIIRELQQCEYGYEDYIASLFNIILFL 181

Query: 169 WICLMYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
                    K       +IE  +A  + +   + SV D A ++  S  W  R F +Y   
Sbjct: 182 VSRQQQESEKTTTSIPEEIEAAVAYFNENYNTKVSVDDYAESLHISTNWFIRNFKQYMKI 241

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +P +Y L  R+  A SLL+    ++GE+A+ + + +  +FS+ FK ++G +P+   KN +
Sbjct: 242 SPAQYILSLRMVNAQSLLENTEYNIGEIAEIVGYDNPLYFSRVFKKEYGVSPAQYRKNLE 301

Query: 288 QH 289
           + 
Sbjct: 302 ES 303


>UniRef50_Q5WK33 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii
           KSM-K16 RepID=Q5WK33_BACSK
          Length = 294

 Score =  194 bits (493), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 15/267 (5%)

Query: 36  LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLK-P 94
            W T  D+ YR    +  ++  I    V  YT+ G G++ +  G    +      F+  P
Sbjct: 29  GWETQTDQAYRWDGTKRMEREKI----VFQYTLSGYGEL-VHEGTLYKVEAGQAFFVSLP 83

Query: 95  MDIHSYHCEGL--VWEQYWMEFTPTSMMDIPVGQQS---VIYNGEIYNQELTEVAELITS 149
                Y+ E     WE  ++       + +    ++    +++ +  ++ +  + +L   
Sbjct: 84  SAHCYYYPEEETEPWEFLYVTIEGKEALRLQKHMENKYGPVFSLQKDSEPIRRLFKLYAE 143

Query: 150 P---EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADM 206
               E   +        + I      +    K+   +  + + I  + A+  +  ++ ++
Sbjct: 144 TAAGEIQDSYTGSQKAYEFILSCFRFLEVPPKQV-VKEPLARAIRYIEANYARPLTLEEI 202

Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266
           A     S+ +  + F      TP  Y    R+  A SLL Q  +++ EVA  +   D  +
Sbjct: 203 AQEAGWSKYYFIKQFKTELNITPMNYVTIIRIKKAASLLAQTDDTIAEVAYQVGMDDPNY 262

Query: 267 FSKAFKHKFGYAPSAVLKNTDQHPTDA 293
           F+K FK   G + S   KN D H  D 
Sbjct: 263 FTKVFKKTVGVSASKFRKNEDNHLIDY 289


>UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
           29176 RepID=B5CQG2_9FIRM
          Length = 277

 Score =  193 bits (492), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 10/275 (3%)

Query: 24  ENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQIT 83
            +  +S +      H      Y          P         + + G G  L+++ E   
Sbjct: 5   RHTFTSPLRHDHTCHLL-YSTYSKYEEDWSSYPHTHYFTELFFVLSGSGSFLVED-ETFP 62

Query: 84  LHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE--- 139
           +  + +I + P   H+         E   +     + +     +  + ++ E+ ++    
Sbjct: 63  IAKHDLIVINPNITHTEKSSLEDPLEYIVLGVDGLNFVIDDANEYLLFHSDEMKDRLDFY 122

Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP----QRRQIEKLIATLHA 195
              + E   + +     +    L  ++        +  +  P    + R+  +    + +
Sbjct: 123 FRTILEETENSQKDYEKVCQNLLNILVVHLSRYASSSVEIFPFHKMESRECSRAKRYIDS 182

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
           S ++  ++  +A     ++ +    F    G +P  Y    R+  +  LL     S+ ++
Sbjct: 183 SFRENITLDKLAEIAQINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQI 242

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHP 290
           A    F  S +F++ F+   G  P+A  K   ++ 
Sbjct: 243 AQQCGFSSSSYFTQCFRKSCGMTPTAYRKQFLRNQ 277


>UniRef50_A0QZE6 MmsAB operon regulatory protein n=1 Tax=Mycobacterium smegmatis
           str. MC2 155 RepID=A0QZE6_MYCS2
          Length = 295

 Score =  193 bits (492), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 98/290 (33%), Gaps = 12/290 (4%)

Query: 7   SSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVY 66
           +     +    +P  + ++ + + ++   L        +       + +   A   V + 
Sbjct: 10  ADGFVGQRMLAVPRPVVDHALGAPVTRRLL--VTDAGFFPRATRHGRSRSRGATEHVVMV 67

Query: 67  TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMMDI--- 122
              G G    + G    +     + L     H Y   E   W  +WM  T +   ++   
Sbjct: 68  CTAGAGWCRTEEG-AFDVGVGDAVLLPKGRAHMYGAAESDPWTLWWMHVTGSDSAELIAA 126

Query: 123 ----PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178
               PV     + +       +++V +++         +  A         I        
Sbjct: 127 ARVSPVSPVVHLVDPAPATSLISQVIDMLADASTTAGLIGAAGAAWHALTVIAATGRQRS 186

Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
                  +++ +  L ++  +R  VA +AA +  S + L  LF + TG  P E+    R+
Sbjct: 187 TGEADP-VDRALEHLRSTSPRRTDVAALAAIVGLSTSHLNALFRQRTGIGPLEFQQQLRM 245

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
             A  LL     ++  VA    F D  +FS+ F    G +PSA  +    
Sbjct: 246 SRARELLDTTTLTIAAVARAAGFNDPLYFSRQFAKVHGQSPSAYRQRHQN 295


>UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI000178AA55
          Length = 275

 Score =  193 bits (492), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 90/246 (36%), Gaps = 9/246 (3%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLV 106
            WP  K+     +     + + G G + + + E   +    ++ +      SY    G  
Sbjct: 30  CWPEWKEFDYTVSYNKLYFILDGEGWVKIGDEELYPV-PGQLVLMPARTRQSYSVISGRP 88

Query: 107 WEQYWMEF-----TPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161
           + +YW  F            + V     +           ++ +   S          + 
Sbjct: 89  YLKYWSHFSATVGDSDVFSWLNVPHCYDLSGNAEMPALFQQLVDAHRSDTLAARLREKSV 148

Query: 162 LTKIIYQWICLMYADGKKDPQRR--QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
           +  I+ +           D      ++ K+   +   L +  ++  MA T+     +  +
Sbjct: 149 MLDILSRVFEHQQPQIHADKMEDMGRLHKVQQYIKNHLHEEITLEQMAGTLHLHPNYFIK 208

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
            F R+ G TP++Y    R++ A  +L+    S+ E+AD   F  + +FSK F+ + GY+P
Sbjct: 209 YFKRHFGITPQKYLSLKRMEQAKLMLRTTSLSIKEIADATGFESANYFSKTFRKEVGYSP 268

Query: 280 SAVLKN 285
           S    N
Sbjct: 269 SEYRNN 274


>UniRef50_A9KKI4 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           phytofermentans ISDg RepID=A9KKI4_CLOPH
          Length = 261

 Score =  193 bits (492), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 95/252 (37%), Gaps = 11/252 (4%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             +          P I + ++    ++G G     +G   TL       + P +I  Y  
Sbjct: 9   SGWEECEAGHFFGPAIRHHYLMHIILKGRG-FYQASGHTYTLGKGQAFLIYPEEITYYQA 67

Query: 103 EG-LVWEQYWMEFTPTSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
           +    W   W+ F    +  +           +    I ++++ ++ +L+++     +N 
Sbjct: 68  DKKEPWIYAWVSFDGPDVEKLLDQTCFRMNRYVSPAIIRDRDVKKIQDLLSAFHQHDSNP 127

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
               L    Y+ + L Y + +K  Q   RR  EK +  +  +      + D+A  +    
Sbjct: 128 ID--LEGCFYRVLALFYGETEKGTQQYERRYYEKAVEYIEQNYGYPLKIGDLAGYVGIDR 185

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
            +L ++F+ +    PK+Y    RL  A+ +L +   SV E A +  F D+  F    K K
Sbjct: 186 TYLYKIFMEFAKCAPKQYLQQFRLKEAMGMLSEGKFSVTEAAYSCGFHDAAAFCHVMKKK 245

Query: 275 FGYAPSAVLKNT 286
            G  P     + 
Sbjct: 246 TGMTPLEFQASQ 257


>UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
           RepID=A7VNA5_9CLOT
          Length = 282

 Score =  193 bits (492), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 94/256 (36%), Gaps = 12/256 (4%)

Query: 43  EHYRVIW--PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100
            HYR++        +      W  +Y  +G G       E+  +    ++   P +   Y
Sbjct: 29  GHYRLLRLEKLHTVRIQGRRDWQLLYVAKGAGHFFRPREER--VKQGSVVVYPPGEPQDY 86

Query: 101 -HCEGLVWEQYWMEFTPTSM------MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAI 153
            +      E YW+ FT            +  G    +   + Y +   E+ + +      
Sbjct: 87  FYLLKEAPEIYWIHFTGERAEGLLEEWGLFHGHSCFVGEQDRYLRCFEEIIQELQLQPPG 146

Query: 154 KNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
              L      +++             +      + +++  ++ +  + +++ D A     
Sbjct: 147 FQRLCALRFEELLLSMGRQRLRLKNPQLAGDSLVTQVLNDMYKTYYRNYTIEDYAKRHNV 206

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           S  WL R F + TG++P +Y +  R+  A  LL+    ++GE+A  L +    +FS+ FK
Sbjct: 207 SVCWLIRRFKQVTGESPNQYLIQIRIRRARELLESSRLNMGEIASVLGYESPLYFSRQFK 266

Query: 273 HKFGYAPSAVLKNTDQ 288
              G +P    +   +
Sbjct: 267 QLQGVSPKRYREQRQK 282


>UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii
           KSM-K16 RepID=Q5WL10_BACSK
          Length = 298

 Score =  193 bits (491), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 104/272 (38%), Gaps = 21/272 (7%)

Query: 35  SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94
             ++     +Y   W + + K     +   ++ + G  K+    G    L    IIFL  
Sbjct: 11  EPYYPVVKFYYYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEG-SYQLKKGQIIFLDA 69

Query: 95  MDIHSYHCEGLVWEQYWMEFT----PTSMMDIP---------------VGQQSVIYNGEI 135
              H           + +EF+     T+                       Q ++++ + 
Sbjct: 70  GTRHRLIV-SERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLLHDTDD 128

Query: 136 YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHA 195
             Q L  +   +       + +    L++ + +   L  A   +  Q+  +++ +A +H 
Sbjct: 129 TYQCLRRLILEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKRALAYIHQ 188

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
           +  +  SVAD+A ++     +L+R+F  +TGK+  E+ +  R++ A ++LKQ   S+ ++
Sbjct: 189 NYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDISITDI 248

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
              +      +FS  FK      PS   K   
Sbjct: 249 PHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280


>UniRef50_P43465 Raffinose operon transcriptional regulatory protein rafR n=9
           Tax=Lactobacillaceae RepID=RAFR_PEDPE
          Length = 277

 Score =  193 bits (491), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 101/252 (40%), Gaps = 12/252 (4%)

Query: 46  RVIWPRDKKKPL-IANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104
               P    K   + +S+V  Y  +G G     N     L    I  L       Y  + 
Sbjct: 23  EACLPNYTYKGNNVRDSYVIHYIQEGKGTFAAANHPATVLKAGDIFILPKGTPCFYQADN 82

Query: 105 L-VWEQYWMEFTPTSMMDIPVGQQSVIYNG-------EIYNQELTEVAELITSPEAIKNN 156
              W+ +W+ F+    ++  +    +                +L+E+ +++  P ++ N+
Sbjct: 83  DQPWKYFWIGFSAGIRIEAMLSGSLLAQKCYLRQVQNGHIYADLSELYKVLHIPNSLIND 142

Query: 157 LAV-AFLTKIIYQWICLMYADGK--KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
           + + + + ++ Y  +    AD    K     Q    ++ L  +     ++ D+   +  S
Sbjct: 143 VLLGSLIYRLFYDLLRWYPADATNIKVKSTEQFNLAVSYLQENYSTGCTIMDLCHYLNLS 202

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            ++L  LF  +   +P++     RL+ A   L    NSV  +A+ + + DSF FSKAFK 
Sbjct: 203 RSYLYTLFKTHANTSPQKLLTKLRLEDAKQRLSTSNNSVQSIANMVGYKDSFTFSKAFKR 262

Query: 274 KFGYAPSAVLKN 285
             G +PS   K+
Sbjct: 263 YSGASPSYYRKS 274


>UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium
           RepID=A3DHI5_CLOTH
          Length = 302

 Score =  193 bits (491), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 51/297 (17%), Positives = 104/297 (35%), Gaps = 31/297 (10%)

Query: 17  NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76
           NI     E+ +SS   +  +  T    H          +P     +  VY  +G     +
Sbjct: 7   NILPKAWESFLSSSTFIPVIVKTIERFH----DTSWHMEPNKHECFEMVYIKRGKAVFEI 62

Query: 77  KNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWM------EFTP-------TSMMDI 122
             G    +  N II +KP   H +  +     E   +       F          + +D 
Sbjct: 63  A-GYPAEIGPNDIIIIKPNQPHKFIVKSESGCEFIVLSFKFVNRFDGQYSDVSLENFLDF 121

Query: 123 PVGQQSVIYNGEIYNQ------ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
             G+++  +     +Q       L  + +   +P+     L    + ++       +  +
Sbjct: 122 VSGKETGPFITLKVSQKNDIIVLLNRILKERENPDIGSEFLNYLLVMELFVLISRALKME 181

Query: 177 GKKDPQR------RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
            +   +         I+  +  ++ + ++  S+ D+A  +  S ++  R F    G +P 
Sbjct: 182 WENSIKNKSPKIKELIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPI 241

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
            Y L  R++ A  LLK   N + ++A ++ F +   F+  FK      P    KN  
Sbjct: 242 NYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298


>UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia
           RepID=A4XJ70_CALS8
          Length = 286

 Score =  193 bits (490), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 97/287 (33%), Gaps = 28/287 (9%)

Query: 19  PLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKN 78
             L  +    S +  I+++          +   +   P   + +  VY  +G     + +
Sbjct: 5   LRLKEKVQHGSAVFPINVYEKI------FVHENNTLLPHWHDEFEIVYLEKGTASFRV-D 57

Query: 79  GEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSV--------- 129
           G++  L     +F+    IH    E    E Y + F+ + +                   
Sbjct: 58  GKEYFLGPKQFLFVNCGSIHGGKAEDNP-EPYAIVFSLSMLFSEGPDICKSKYLQSVSER 116

Query: 130 ------IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR 183
                  +  E   + ++ +  +          L   +L  I Y      Y       + 
Sbjct: 117 KLLVQNSFEDEHTRELISNIITVWKEKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRE 176

Query: 184 -----RQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
                 +I+  +  ++++      +  +A     S+ +  RLF   T  TP +Y    R+
Sbjct: 177 LDLKLEKIKSALDFINSNYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRV 236

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           + A+ L+K    S+ E+A  + F +  +F K FK   G  P    KN
Sbjct: 237 EKAIELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKKN 283


>UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales
           RepID=A8RPA3_9CLOT
          Length = 339

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 88/276 (31%), Gaps = 26/276 (9%)

Query: 35  SLWHTYADEHYRVIWP--RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFL 92
                +    Y    P    +           +   +G G + + + E         + +
Sbjct: 60  HAGRDFPFNIYPCSIPADFRQVPVHWHEDMEIIAVKKGRGVVTV-DMEPYEARAGEAVVV 118

Query: 93  KPMDIHSY-HCEGLVWEQYWMEFTPTSMMDI--------------------PVGQQSVIY 131
            P  +H    C     E   + F P+ +M                      P+     + 
Sbjct: 119 FPGQLHGISQCGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLP 178

Query: 132 NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKL 189
           +   + + +  + +L               L   +     +   +    P   R ++++L
Sbjct: 179 DYGAFMECIGILDQLCGKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKSRERMKRL 238

Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249
           +  +     ++ +V D A     S +   + F +Y G    +Y  + RL+ A  +L    
Sbjct: 239 LEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTP 298

Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           + V  VA    F +  +F++ F+ K+G  P    KN
Sbjct: 299 DPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKN 334


>UniRef50_Q5WK82 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii
           KSM-K16 RepID=Q5WK82_BACSK
          Length = 297

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 109/288 (37%), Gaps = 18/288 (6%)

Query: 6   QSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAV 65
            +    + T +  P     N+ + G  + +    Y D +         K+    +S +  
Sbjct: 7   FTRGSHSFTFHLFPETGLLNLWNVGWEVQTDTSYYWDGN---------KRAKDNDSIIFQ 57

Query: 66  YTVQGCGKILLKNGEQITLHGNCIIFLK-PMDIHSYHCEG--LVWEQYWMEFTPTSMMDI 122
           YT+ G G + +   E+ T+  +    +  P D   Y+ E     WE  ++     S+ DI
Sbjct: 58  YTIAGSGVLEIG-KERYTVGQHQAFIVSVPSDHRYYYPENAKEPWEFIYISLQGASVQDI 116

Query: 123 ---PVGQQSVIYNGEIYNQELTEVAELITS--PEAIKNNLAVAFLTKIIYQWICLMYADG 177
               + +   I +    +  +  +  +      + +++    A              A+ 
Sbjct: 117 WQRLIQKSGPIVSLPPNSPLIRSLYSIYADTKADGLRDPYLAATQGYQFLIECFRAMAEE 176

Query: 178 KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDAR 237
           +   +    ++ +A + A   ++  + ++A  +  S   L RLF +    TP  Y  D R
Sbjct: 177 RPQNEPYHYQRALAYIEAHYHEQICLDNIAEEVGVSRYTLTRLFKKQLHTTPISYVTDLR 236

Query: 238 LDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           +  A SLL     ++ ++A  + + D  +F K F+   G + +   +N
Sbjct: 237 MRKACSLLLHTNRTIKQIAADVGYPDDNYFHKVFRRYTGSSATQFRRN 284


>UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8RR78_9CLOT
          Length = 281

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 88/249 (35%), Gaps = 21/249 (8%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS--YHC--EGLVWEQY 110
           +P   + +   Y + G  K+ + N +   L    +  + P+++H   Y    E   +  Y
Sbjct: 34  RPHYHSYYEIYYLLSGKCKMFI-NQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGIY 92

Query: 111 W--------MEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFL 162
           +        +             Q       E +  ++ E+   +   E   ++     L
Sbjct: 93  FSRDTVTSFLSLCGREAFGHIFSQPKRTIPSE-FRPKIEELLAQMQDEEKQGDSYCQIQL 151

Query: 163 TKIIYQWICLMYADGKKDPQRRQIE-------KLIATLHASLQQRWSVADMAATIPCSEA 215
             +++Q + ++    +   +   +E       +    ++   Q+  ++  +AA    S  
Sbjct: 152 CSLLHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSPT 211

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           +  + F   TG   KEY    R+  A  +L+    SV  VA    F D  +F   F+   
Sbjct: 212 YFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLT 271

Query: 276 GYAPSAVLK 284
           G +P    K
Sbjct: 272 GVSPREYRK 280


>UniRef50_A9QSR3 Transcriptional regulator, AraC family n=1 Tax=Lactococcus lactis
           subsp. lactis KF147 RepID=A9QSR3_LACLK
          Length = 289

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 97/252 (38%), Gaps = 11/252 (4%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG- 104
               P     P I  ++V  Y   G G+ ++  G +  L       +       Y  +  
Sbjct: 21  EATIPNFSFGPAIRENYVIHYITSGSGRYMI-YGFEHQLKAGDCFIIPADVETFYQSDAL 79

Query: 105 LVWEQYWMEFTPTSMMDIP----VGQQSVIYNG---EIYNQELTEVAELITSPEAIKNNL 157
             W  YW+  +   + D+     +  +  I        + +  +++  LI+  +   +  
Sbjct: 80  TPWAYYWLGLSGHVVNDLFARTALDDKGWILENVSKTEFIEHFSKIQNLISDDDKTVDLD 139

Query: 158 AVAFLTKIIYQWICLMYAD--GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
               L  ++   I L        K+      EK    ++ +  Q   + D+ A +  S A
Sbjct: 140 IQVELFALMKSLITLFPKSITEHKNQSDYYAEKAYTFINQNYSQSIKIKDVLAHVMISRA 199

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           +L  +F    G +P++Y +D R+  A  LL    N V ++++ + F DS  FS AFK ++
Sbjct: 200 YLFTIFKHKYGLSPQKYLIDLRMAKAAMLLIHSDNLVSQISEAVGFSDSLSFSSAFKKRY 259

Query: 276 GYAPSAVLKNTD 287
           G +P+       
Sbjct: 260 GVSPTKFKTQKH 271


>UniRef50_C6CWX0 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CWX0_PAESJ
          Length = 275

 Score =  192 bits (488), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 99/269 (36%), Gaps = 11/269 (4%)

Query: 26  VISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLH 85
            I +        +     H+      D+++      +  + +  G G + + + E+ T+ 
Sbjct: 7   PILADSDRKLPIYVDIIGHWNNQETIDRQQ--GFPHYQWLQSTGGEGVLWIGD-EKYTVK 63

Query: 86  GNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQS------VIYNGEIYNQE 139
                 L P   H Y+     W+ Y++ F  +   D+             + + E+    
Sbjct: 64  PGQGFCLFPGVPHRYYAVRDPWDVYFISFGGSLAKDLLNQAGIKEPGLYSVTDSEMIVAH 123

Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRR-QIEKLIATLHASLQ 198
           L  ++ +  S            L   +   + ++    +   Q   ++  +I  +   + 
Sbjct: 124 LRGISAMAESGLPFLGLECSKLLYLFLLDLMKVVQVSTQSAEQYYMRLNPVIRYIEEHID 183

Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL-KQQGNSVGEVAD 257
              ++ D+++ I  +  +L RLF +  G  P EY    R++ +  L+   + + + E+A 
Sbjct: 184 SVMTIQDLSSRIGVTPQYLCRLFKQLMGMRPMEYVNRERINRSKELMFLGREHKMQEIAA 243

Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            + F  + +FS  FK   G +P    K  
Sbjct: 244 KVGFDSASYFSTVFKRMEGMSPEQFKKMH 272


>UniRef50_C6D174 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D174_PAESJ
          Length = 281

 Score =  192 bits (488), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 91/280 (32%), Gaps = 12/280 (4%)

Query: 16  YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75
             +P  I    I      I  +  + +  + V       +  +   +     + G G + 
Sbjct: 5   IFLPKPIFPRHICFPDF-IGGYSEFPE--HAVNREFATTENNLDRYYNLHIVLGGKGYLH 61

Query: 76  LKNGEQITLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQ------S 128
             N     L         P    +YH +    W   W+ F      +   G+        
Sbjct: 62  TDNM-TYELTQGQGFLYGPGLRQTYHSDARDPWSIRWVHFYGARPEEFLDGKGLDEPWLF 120

Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIE 187
            + +       +  + EL  S E      A + L +++ +        +        +I 
Sbjct: 121 HLPDLAPVEALMERLLELGRSYEVDDEYAAASTLYELLTRIQTTASQLNVSVHQTADKIR 180

Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247
                + A+  Q +++   AA    S  +  R F +  GK+  ++  +AR+  A  LL  
Sbjct: 181 AAANYVRANCNQPFTLEQAAAIAGYSSHYFSRKFNQTFGKSFSDFLTEARILRAKQLLAS 240

Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
              SV  +A    F  + +FSK F+ + G  P    +   
Sbjct: 241 TRLSVKLIALETGFSQTSYFSKCFRDQEGMTPLQFRERHQ 280


>UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CTF5_PAESJ
          Length = 294

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 89/257 (34%), Gaps = 27/257 (10%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFT 115
              +    +   +G     + + +   L     IF+   ++HS Y   G       + F 
Sbjct: 36  HWHDELELLLVTEGTAVFRV-DLQDYELQAGEAIFVNSGELHSGYVVGGKPCSFDAVVFH 94

Query: 116 PTSM--------------------MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155
            +                       ++P   +     G      L ++ E+  + +A   
Sbjct: 95  SSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAASE 154

Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRR-----QIEKLIATLHASLQQRWSVADMAATI 210
                 L  I+ + + L     +  P++      +++ +I  +  +  +   +  +A   
Sbjct: 155 LTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELA 214

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             SE++  R F R T K+P EY    R+  A S L+Q    + EVA  + F    +F+  
Sbjct: 215 RMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTV 274

Query: 271 FKHKFGYAPSAVLKNTD 287
           F+ +FG  P        
Sbjct: 275 FRQRFGCTPREYRSRLQ 291


>UniRef50_C6D3L8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D3L8_PAESJ
          Length = 274

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 91/239 (38%), Gaps = 7/239 (2%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYW 111
           + ++P     ++    ++G G++ + NG+   +    + FL P   HSY      W+  W
Sbjct: 31  ETERPEGFPDYLMQQVLEGFGEV-VVNGKAYKVEAGDVFFLYPDIPHSYKPLNQKWKVSW 89

Query: 112 MEFTPTSMMDIPVGQQSVIY-----NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166
           + F       + +                  + L ++  L    +   +      L  ++
Sbjct: 90  VSFNGREADQMLLFAGISESGTGRLKTNELIKPLEQMLTLAMDNDQEADLERSKLLYGLL 149

Query: 167 YQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226
                 + +    D +  +++ ++  +  +LQ+  ++ ++A     +  +L R+F +   
Sbjct: 150 IDLKYQLLSPSYSDQEFDRVKPVLHYIENNLQRPLTLIELAGVATVTPQYLCRMFQQTMN 209

Query: 227 KTPKEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
             P EY    R+  +  L+ +     + E+A  + F  S +F   F+   G  P A  K
Sbjct: 210 IRPMEYINQQRIKRSKQLMFQHPAMRMYEIAGRVGFESSSYFGVVFRKLNGMNPEAFKK 268


>UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=Lactobacillus
           salivarius RepID=Q1WTL6_LACS1
          Length = 278

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 95/257 (36%), Gaps = 11/257 (4%)

Query: 41  ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100
           A+          K  P +   ++  Y + G G     +     LH      ++P    +Y
Sbjct: 20  ANVGRSDTLSGHKYGPAVRPYYLIHYILAGSGTFKT-DQSIYKLHAGQGFLIEPGQETTY 78

Query: 101 HCEGL-VWEQYWMEFTPTSMMD----IPVGQQSVIY--NGEIYNQELTEVAELITSPEAI 153
             +    W   W+ F+          IP+ Q+  I+  N      EL  +  L +     
Sbjct: 79  IADKNTPWSYVWIGFSGNFADQLMQQIPLNQREPIFSLNDPKRLIELVNLLLLKSVNSTT 138

Query: 154 KNNLAVAFLTKIIYQW--ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211
           K  L +++L + +       ++  +         +EK I+ ++ +     S A +A  I 
Sbjct: 139 KKLLNLSYLLEFLSIISNATIISRESTTSISDIYVEKAISLINKNFP-NISAASLAQMIG 197

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
              ++L + F + TG T + Y  + ++  A  L++    S+ E++    +      ++ F
Sbjct: 198 LDRSYLGKRFKKVTGMTLQTYLKNYKITQARHLIESTNLSLLEISQRCGYQRVDSLARTF 257

Query: 272 KHKFGYAPSAVLKNTDQ 288
           K  +G  PS       +
Sbjct: 258 KATYGLTPSDFRLQQKE 274


>UniRef50_A4XK77 Transcriptional regulator, AraC family n=2 Tax=Clostridia
           RepID=A4XK77_CALS8
          Length = 273

 Score =  191 bits (486), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 101/248 (40%), Gaps = 10/248 (4%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL 105
              +     +      +  ++T++G G + + +G++  +  N   FL P   H Y     
Sbjct: 24  SNEYQEHIIRKNGHPDYHYLHTLEGSGYL-IVDGQKYLVDENTAFFLYPGIAHEYFAATS 82

Query: 106 VWEQYWMEFTPTSMMDIP--VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163
            W   W+ F   +   I   +G +          + L  + E I++  ++ N +     +
Sbjct: 83  KWSTIWLTFNGPASETILKTMGIRPFEIFKLTNKKYLEGMLEAISNKASVYNYIVSIECS 142

Query: 164 KIIYQWICLMYADGKKDPQRR------QIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
           ++IY +I  M+ + +   ++       ++  ++  +  + ++  S+ ++++ +  S   L
Sbjct: 143 QLIYSFILHMFLNLQNKIEKNFENNYLKLLPVLQYIEENYKKAISLDEISSIVNLSPQHL 202

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLL-KQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
             +F +    TP EY +  R+  A  LL +Q    + EV   + F +  +F   FK   G
Sbjct: 203 CTVFKKTFQTTPYEYLIRVRIQKAKELLMRQSSIQIKEVCYEVGFKNPSYFCYMFKKLEG 262

Query: 277 YAPSAVLK 284
             P    +
Sbjct: 263 ITPLQFKR 270


>UniRef50_B5CYP4 Putative uncharacterized protein n=2 Tax=Bacteroides plebeius DSM
           17135 RepID=B5CYP4_9BACE
          Length = 297

 Score =  191 bits (485), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/292 (20%), Positives = 108/292 (36%), Gaps = 10/292 (3%)

Query: 4   KLQSSDVKNETPYNIPLLINENVISSGISLISLWH--TYADEHYRVIWPRDKKKPLIANS 61
            + + + K              V + G ++I   +        +   +  +  K  +   
Sbjct: 3   NIPTHNFKYIINGRHDHNWGFTVQTVGSAIIHPNYESYPPICGHPTEFTFNPSKGRLLPI 62

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSMM 120
           +V +Y  +G G       E + +    +I + P   HSY   +   W++YW+ F    + 
Sbjct: 63  FVQLYIAKGKGIFFSSPNESMEIKEGDLILIPPYTWHSYLPHKSTGWKEYWIGFDCPHIE 122

Query: 121 DIP----VGQQSVIYNGEIYNQELTEVAE--LITSPEAIKNNLAVAFLTKIIYQWICLMY 174
           +        +   IY   I ++ +    E   I + E       +A +  +I+  I    
Sbjct: 123 NCLKHNLFNKNKKIYRIGIQDKIINLYEEAIRIANEEKSGYQQYLAGIANLIFCMIPYYN 182

Query: 175 ADGKKDPQRR-QIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233
            +   DP     I K    +   L    S    AA I  S +W R++F  YTG TP +Y 
Sbjct: 183 NNRSFDPATEDIINKAKIIMKEELLNGISPEKTAAQIKLSYSWFRKIFKDYTGVTPSQYI 242

Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            + ++  A   L      + E+A  L + D  +F K FK   G  PS   K+
Sbjct: 243 QELKMQEAKICLTTSHIQIKEIAYHLGYEDIAYFIKLFKRHTGKRPSEYRKS 294


>UniRef50_C6D787 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D787_PAESJ
          Length = 267

 Score =  190 bits (484), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 90/258 (34%), Gaps = 16/258 (6%)

Query: 35  SLWHTYADEHYRVIWP--RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFL 92
           +   +     Y    P  R K  P + + +   + + G G +   N +Q  L       +
Sbjct: 6   AFNSSQLICTYSGYKPANRHKWGPGVRDIYALHFIISGKGTLETNN-QQYPLSTGDSFMI 64

Query: 93  KPMDIHSYHCE-GLVWEQYWMEFTPTSMMDI-----PVGQQSVIYNGE-IYNQELTEVAE 145
            P     Y+ +    WE  W+EF       +         + V+            +V  
Sbjct: 65  FPKTEIYYYPDPEDPWEYVWIEFKGDEAKRLIAMTGLESDKPVVAACPADLKPYFPQVVG 124

Query: 146 LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQR-WSVA 204
                   +     A L  ++  ++     + +       ++     +  +  +   +V+
Sbjct: 125 --ADTRHFEKMRTEAQLRLLLSYYVEFYPREAQP---IDYVQLAKEYIMINYWRTTLTVS 179

Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264
           D+   +    ++L RLF   +G +   Y    R++ A  LL   G S+  VA ++ + D 
Sbjct: 180 DIVNAVSLERSYLFRLFKEASGMSVSGYMTAYRMERARELLMSSGLSIKSVACSVGYKDQ 239

Query: 265 FHFSKAFKHKFGYAPSAV 282
            +FSK FK    Y PS  
Sbjct: 240 LYFSKVFKKATSYTPSEY 257


>UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
           1_7_47FAA RepID=C5EG90_9FIRM
          Length = 298

 Score =  190 bits (483), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 96/255 (37%), Gaps = 11/255 (4%)

Query: 41  ADEHYRVIW--PRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP-MDI 97
           +  HY+++     +  +P     +  +Y   G      K    + L     +   P    
Sbjct: 26  SAGHYKLVHFPRFETTRPTGRPDYQLLYIASGIAHFQ-KGETYVPLPAGSAVLYHPNHTQ 84

Query: 98  HSYHCEGLVWEQYWMEFTPTSMMDIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIK 154
             Y+      E YW+ FT   +           +  YN  I ++ ++    +I   +  K
Sbjct: 85  FYYYSAEDSSEVYWIHFTGNRVSQYLSDWGVPDNDFYNVGINSRYISFFNHIIHEQQLKK 144

Query: 155 N---NLAVAFLTKIIYQWICLM-YADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATI 210
                L   +L +I+      M  A    +     I K +  LH    +  S+ D+A   
Sbjct: 145 ENYMELCKYYLIQILILMNRGMKEASAPYNNHVSIINKTVTYLHEHYNEPISIIDLAKEN 204

Query: 211 PCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKA 270
             +  W    F  Y G +P+ Y L+ R+D A   L     S+ +VA    + D+F+FS+ 
Sbjct: 205 HLTPNWFNHCFQEYYGMSPQAYLLNIRIDKAKEFLTNYMLSISDVALLTGYSDAFYFSRI 264

Query: 271 FKHKFGYAPSAVLKN 285
           FK K G +P    KN
Sbjct: 265 FKRKTGLSPQQYRKN 279


>UniRef50_C0E8K8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum
           DSM 5476 RepID=C0E8K8_9CLOT
          Length = 299

 Score =  190 bits (483), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 109/280 (38%), Gaps = 21/280 (7%)

Query: 27  ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86
            S    L  +   YA + Y              +S++ +YT+ G G I + +G +I ++ 
Sbjct: 24  TSLPFYLTEVGKFYAGKGYYTER-------SDKDSYLILYTISGRGSITV-DGNEIDIYA 75

Query: 87  NCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDI--PVGQQSVIYNGEIYNQELTEV 143
           +  +F+       Y  E    W   W     T +      V    V         +  E+
Sbjct: 76  HNAVFINCNSHQFYKTESDVPWVFLWAHINGTGVEPYYSLVNVGRVSQEKISDYADFVEL 135

Query: 144 AELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ-------IEKLIATLHAS 196
            E I       +   ++ L+  + + + ++          ++       I   +  +  +
Sbjct: 136 FEEILITSKFNDVRTLSNLSVNLQRLLSIILKSRLSSSNNKKHESHIADIRSSVDYIRKN 195

Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256
            +++ S+ D+   I  S+ +  RLF +Y G TP +Y ++ R++ A  LL      +G+++
Sbjct: 196 YKRQISIDDIIHRINISKYYFIRLFKQYMGTTPYDYLINYRINQAKILLNSTSMPIGDIS 255

Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKNT---DQHPTDA 293
             + F D  +F   FK + G  P+    +T    + P DA
Sbjct: 256 QEVGFLDESNFISHFKRQTGIKPTEYRNSTLGFHRPPKDA 295


>UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0ZDD0_BREBN
          Length = 298

 Score =  190 bits (482), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 89/232 (38%), Gaps = 10/232 (4%)

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWMEFTPTSM 119
           +V  YT+ G G++ +   +   L       ++    H Y+   E   WE  ++    +  
Sbjct: 55  YVFQYTISGSGRLDIGE-KSYPLRAGKTFLVEVPSCHRYYFSGESDHWEFVYITLVGSQA 113

Query: 120 MDIPV------GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLM 173
            +         G    I       Q L ++ + +          + A   + + +    M
Sbjct: 114 TECWEYIQANGGPVLSIPPEAKLVQLLLKIYQEVCEKRVTDLYCSSAKAYEFVMECYRFM 173

Query: 174 YA-DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEY 232
              D        +I + +  + A  ++  S+ D+A     S  +L  LF  Y   TP +Y
Sbjct: 174 KNIDNPSKQVPDRISEAVCFIQAHYKETISLGDIANAAGLSRYYLINLFREYLNTTPLQY 233

Query: 233 YLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
               R++ A+ LL Q   SV ++A  + + ++ +F+K FK   G +P    +
Sbjct: 234 ITKLRIEKAMDLLTQTNLSVNDIALAIGYANANYFNKVFKKLIGTSPGQFRE 285


>UniRef50_C6D447 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D447_PAESJ
          Length = 292

 Score =  190 bits (482), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 93/285 (32%), Gaps = 19/285 (6%)

Query: 12  NETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGC 71
            ET   +   I+E      I  +    T   + Y          P    S+      +G 
Sbjct: 9   FETAEFLFHAISELDKQGSIWPVRGGMTETRQGYSA-------GPKRIESYSLHIVKEGF 61

Query: 72  GKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWMEFTPTSMMDIPVGQQSV 129
            ++       +TL    +  L P   ++Y+           W+        ++       
Sbjct: 62  VRVEWDADNGVTLSAGDLFCLFPARTYTYYAIEGEKPPRMSWIVMDGPRAAEMLALTGIS 121

Query: 130 IYNG-------EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD-- 180
                      +   + L  + + + S E    ++    +  ++Y+ +  +         
Sbjct: 122 CERPFLENAWTQEAERALLGLLDWMRSRETESAHVRSLDMQSLLYRLLAALCRTAPHAYA 181

Query: 181 -PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLD 239
                 +++ ++ +     +  +V   A     +  +    F    G  P E+    R++
Sbjct: 182 LNATDWVKQSMSYIRQHATEGITVQQAAKAAGMNRTYYSVAFSEKVGMPPSEFITQVRME 241

Query: 240 LALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            A  LL +   S+ EVA T  +   + F++ FK++ G  P+A  +
Sbjct: 242 SAKRLLAETDASITEVAYTTGYSSLYAFTRTFKNRMGETPTAYRE 286


>UniRef50_C7G8V7 Putative raffinose operon transcriptional regulatory protein RafR
           n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8V7_9FIRM
          Length = 289

 Score =  190 bits (482), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 96/248 (38%), Gaps = 11/248 (4%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
             +         P I + ++  Y ++G G + + N  +  +        +P  +  Y+ E
Sbjct: 41  GRQNCKDMHAWGPGIRSCFIIHYVMKGAGYL-IVNHRKYHVKAGESFLTRPYTLIEYYPE 99

Query: 104 GL-VWEQYWMEFTPTSMMDIPVGQQSVIYNG-------EIYNQELTEVAELITSPEAIKN 155
               WE  W++F    + +     Q    N        E       ++ E+    +    
Sbjct: 100 EENPWEYMWVDFLGNQVENWVEHTQFEEKNPVCSLKQEEKILPLFLKLLEMDIYHQQRNE 159

Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQ-RWSVADMAATIPCSE 214
              V      +Y  I  +   G+ D   +++E  +  +     +  + +  +   +  S 
Sbjct: 160 ACGVLLSILGVYLDIFPVECVGRSDEDEKRMEMAVLLIKNHYHKSEFHIQRLCEMLNISR 219

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
             L RLF   TG +PK+Y L+ R++ A  LL+    SV   A +  F DSF+FS+ FK  
Sbjct: 220 VTLYRLFKSKTGISPKQYLLNYRIEQAKLLLRMGT-SVKNTAASCGFNDSFYFSRVFKEY 278

Query: 275 FGYAPSAV 282
            G +PS  
Sbjct: 279 TGSSPSRY 286


>UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D7E7_PAESJ
          Length = 281

 Score =  190 bits (482), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 109/269 (40%), Gaps = 13/269 (4%)

Query: 33  LISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFL 92
           L  L     + +Y    P+ ++   I +        +G G + + +G+        ++ +
Sbjct: 14  LQHLQVHLEEAYYTQCSPQWRELDYIPSYNKFYLICEGEGWLNI-DGQDYRPVPGQLVHM 72

Query: 93  KPMDIHSYHCEGL-VWEQYWMEFTPTS-------MMDIPVGQQSVIYNGEIYNQELTEVA 144
               + SY       + +YW  FT T         ++IP        + +   +   E+ 
Sbjct: 73  PAHVLQSYSAVSDRPYSKYWCHFTATMGEMDLFQWLEIPPILDISPDHTDSLTKLFRELV 132

Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR----RQIEKLIATLHASLQQR 200
           EL  +   +      A L +II  ++       K  P R     +++++ A + A+L + 
Sbjct: 133 ELYQNRSYLARIREKAILLEIIALFLSHSDTHLKFVPGRLGEIERLKQIEAFIEANLSEA 192

Query: 201 WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLN 260
            ++  +A  +     +L R F ++    P +Y    R+  A SLL     ++ E+A+ + 
Sbjct: 193 LTLEQLAKHVHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAKSLLGTTDLAIKEIAELVG 252

Query: 261 FFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
           F D+ HF+KAF+ +   +P+       ++
Sbjct: 253 FPDTNHFAKAFRKEASCSPTEYRHRAGRN 281


>UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia
           intestinalis L1-82 RepID=C7GHF4_9FIRM
          Length = 291

 Score =  189 bits (481), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 105/270 (38%), Gaps = 31/270 (11%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-- 102
           ++    +D+ +    +     + + G GK  + +     +    II L P   H   C  
Sbjct: 21  WKGTRLKDEARYHSHDFIEMAFILSGHGKYKIAD-RLYDVSEGDIIILNPGQKHQALCTD 79

Query: 103 EGLVWEQYWMEFTPTSMMDIPVG---------------QQSVIYNGEIYNQELTEVAELI 147
                 ++++        D P                 Q  +++      Q+L ++   +
Sbjct: 80  PSNPATEFFVGLCDVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAM 139

Query: 148 TSP----EAIKNNLAVAFLTKIIYQWICLMYADGK--------KDPQRRQIEKLIATLHA 195
           +       + +  +  ++L +++   +       K           ++  +++++     
Sbjct: 140 SVENDVCRSGRYIMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFED 199

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ-GNSVGE 254
              ++ S+  +A  +  S  ++ R+F   TG TP  + ++ RL+ A  LL+     S+ E
Sbjct: 200 HYSEKISLDQIAENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQE 259

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           VA  + + D +HFSK FK +FG  PS + +
Sbjct: 260 VAAKVGYDDVYHFSKLFKKRFGMPPSKIRR 289


>UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM
           3353 RepID=C0ERJ9_9FIRM
          Length = 294

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 100/276 (36%), Gaps = 27/276 (9%)

Query: 34  ISLWHTYADEHYRVIWPRDKKK--PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIF 91
           I     +    Y    P D +       +    +   +G G + + +    ++    IIF
Sbjct: 19  IHTPDDFPYNTYLCSIPLDFQSVNLHWHDEVEIIVIKKGSGIVSV-DLTTYSVSAGDIIF 77

Query: 92  LKPMDIHSY-HCEGLVWEQYWMEFTPTSMM--------------------DIPVGQQSVI 130
           + P  +H+    +  + E   + F  + +                     +I     +  
Sbjct: 78  VLPGQLHAISQKDNEIMEYENILFKSSLLKSSGYDLCNDKFIQPLFSGSLNICPVINNQT 137

Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKK---DPQRRQIE 187
                    + E+  L             A L +I+Y  +     +  K       ++I+
Sbjct: 138 PYYPPVITAINEIDHLCDLRPYAYQLSIKAHLFQILYTLVSNCGQNKIKPINQKSLKKIK 197

Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247
            +++ +  + Q+  ++ D+A     S+++  + F    G +  +Y  D RL++A  LL  
Sbjct: 198 TILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAELLTT 257

Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
             +++ ++A    F +  +F++ FK K+G +P    
Sbjct: 258 TTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293


>UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile
           DSM 15176 RepID=D1PIK0_9FIRM
          Length = 615

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 93/249 (37%), Gaps = 12/249 (4%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWME 113
           +      +   Y  QG  + ++++ +   L  +  I   P    HS+    + + +  + 
Sbjct: 29  RSHYHEFFEIYYLEQGRRQHIIEDSQ-YILQPDEFIIFPPFVMHHSFEENDVPFRRLLLY 87

Query: 114 FTPTSMMDIPVGQ---------QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164
           F P  +    + +         +            + ++ +     +     L    +  
Sbjct: 88  FNPEVIRSPQILRTLSERARVYKLPRAQSAPIYNLMKDILQEQERDDLYSRELITLMVNA 147

Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           +  Q +     +  +  QR ++  +I  LH    +  ++  +A     S+  L R F RY
Sbjct: 148 LALQLVRN-SDEAARPEQRNRVTDIINYLHEHFTEDITLEQLANHFYVSQYHLCREFKRY 206

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           T  T  +Y  + R+  A  LL++   S+ E++  + F +  HF++ +K   G +PS   +
Sbjct: 207 TSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMSPSQNKQ 266

Query: 285 NTDQHPTDA 293
              +    A
Sbjct: 267 AYLKRGKPA 275


>UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus
           sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL
          Length = 293

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 91/268 (33%), Gaps = 25/268 (9%)

Query: 51  RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG---LVW 107
                    ++W   Y V G     +K+ +   +    ++ +    +H     G      
Sbjct: 25  FSMDGEHFHDAWEIYYLVSGERCYFIKD-QIYRIGAGDLVLIPVNVLHKTSPSGKLSQPH 83

Query: 108 EQYWMEFTPTSMMDIPVGQQSVIY--------------NGEIYNQELTEVAELITSPEAI 153
           E+  + F    +  +  G++  +                 ++  Q L  +          
Sbjct: 84  ERILVNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLAEQKQQAGG 143

Query: 154 KNNLAVAFLTKIIYQWICLMYADGKKDPQR-------RQIEKLIATLHASLQQRWSVADM 206
                   L +++   + +  A    D +        R+I ++   ++A   +  S++D+
Sbjct: 144 YEEYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLSDL 203

Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266
           A     S  +L  LF R TG T   Y    R++ A +LL++    V E+A  + +    H
Sbjct: 204 ANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTH 263

Query: 267 FSKAFKHKFGYAPSAVLKNTDQHPTDAS 294
           F + FK     +P +  +        A 
Sbjct: 264 FGRVFKKAKAVSPQSYRREQRMLSGGAG 291


>UniRef50_C2EN40 AraC family transcriptional regulator n=2 Tax=Lactobacillus
           RepID=C2EN40_9LACO
          Length = 276

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 99/270 (36%), Gaps = 11/270 (4%)

Query: 27  ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86
                   +     +   +    P+    P+  + ++      G G     +G+   L  
Sbjct: 6   WGFNNQSYNAQFYISSGGFEKPHPKHSYGPMGRSGYMIHCVTSGHGIFKS-DGKVYHLKK 64

Query: 87  NCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEIYNQELT 141
             I +++P        +    W  YW+ F        M  I +  ++ I + +       
Sbjct: 65  GDIFYIQPHKTTYMEADENDPWTFYWVRFIGNLVPKYMKRINLSYKNPIMSQQDLPTVFQ 124

Query: 142 EVAE--LITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD---PQRRQIEKLIATLHAS 196
           +V +    +     ++    + +  I+         +             ++ +  +  +
Sbjct: 125 DVIDIVEYSQNSGPQDFYYQSKMFAILNALELHFPKENPHKNVTTTSDIYDRALRYIANN 184

Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256
            +++ SV D+   +    ++L R+F +++   P+E+  + RL+ A  +LK + N+V  VA
Sbjct: 185 YEEQISVHDLVRYLNIDRSYLFRIFKKHSQTNPQEFITNYRLNKASEMLKSKENTVEYVA 244

Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            +  F     F + FK K+G +PS   K  
Sbjct: 245 LSCGFLSYQSFFRFFKKKYGISPSDYKKKY 274


>UniRef50_A5ZYS8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
           29174 RepID=A5ZYS8_9FIRM
          Length = 304

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 107/279 (38%), Gaps = 10/279 (3%)

Query: 21  LINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80
            I     ++  +  + ++      +    P   ++    NS++ +YT++G G +    G 
Sbjct: 21  SIRFINTATPRARQTFFYVQEAGDFCTSSPYFTEREN-LNSFLIIYTLRGKGLLKYH-GS 78

Query: 81  QITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPTSM----MDIPVGQQSVIYNGEI 135
           Q +LH     ++  M+ H Y C +   WE  W+ F   S      +       ++ + + 
Sbjct: 79  QYSLHPGTTAYINCMEHHHYECLQKQNWEFLWLHFNGPSALGYYEEFMRSNFHILDSLDP 138

Query: 136 Y--NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP-QRRQIEKLIAT 192
           +     +  +  +    +     L+   +  I+ + +     +          ++ ++  
Sbjct: 139 FFMESTMRRILSITQRKDIHSEILSSCLIINILTRILIENDTENLSLGFMPTYLKTVLKA 198

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
           +    Q+  S+  +A     S+  L R F +Y G  P EY +  RL+ + +LLK +  ++
Sbjct: 199 IDQHFQEPLSLESLAIAAGVSKYHLAREFKKYIGMPPNEYLIVTRLNHSKTLLKYEDLTI 258

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPT 291
            E+A +  F    H+   FK   G  P    +    +  
Sbjct: 259 EEIAYSCGFHQVSHYINLFKKHEGCTPLKFRREWHSNEA 297


>UniRef50_UPI000196AF05 hypothetical protein CATMIT_01210 n=1 Tax=Catenibacterium mitsuokai
           DSM 15897 RepID=UPI000196AF05
          Length = 288

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 90/256 (35%), Gaps = 9/256 (3%)

Query: 44  HYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE 103
                       P++ + +V  +   G G++ + N     +    I  +    + +Y  +
Sbjct: 34  GIEQCKSEYTYGPIVRSYYVMHFVFSGKGQLTI-NEHSFDVKAGDIFLIPANKVATYQAD 92

Query: 104 -GLVWEQYWMEFTPTSMMDIPVG-----QQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
               W+  W+ F   +                I +    N+   ++  L+          
Sbjct: 93  KNHPWKYGWVNFLGINAEQYFYSLTKDTHDQYIIHNVDVNKYYKQIERLLDLSFNTDAEY 152

Query: 158 --AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
             + + L  I       +      + +    E++   L  + Q    ++++A        
Sbjct: 153 FESNSILLHIFAMLYEELNIHFNNNVKYSLAEEIRLYLDLNYQYNLKMSEIADKFGIHAN 212

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           ++ RLF +    +PK+Y L  +L  A  LL+     V  +A ++ F D+  FSK F   +
Sbjct: 213 YMTRLFHQKFDISPKQYLLSIKLKKAAGLLQSTNLPVSTIAASVGFIDALAFSKKFSKTY 272

Query: 276 GYAPSAVLKNTDQHPT 291
             +P+   K TD+   
Sbjct: 273 HCSPTQYRKQTDEKKN 288


>UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein,
           arabinose-binding/dimerisation n=3 Tax=Enterococcus
           faecium RepID=Q3XWE2_ENTFC
          Length = 288

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 96/244 (39%), Gaps = 12/244 (4%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH-SYHCEGLVWEQY 110
              K    +S++      G G +   NG++  L    ++F+  +  +     E  +W   
Sbjct: 44  HTSKRSGLSSYLCFLVESGSGTLEY-NGQKYMLQAGGMVFIDCLKPYAHESSEDDLWTLR 102

Query: 111 WMEFTPTSMMD----IPVGQQSVIYNG---EIYNQELTEVAELITSPEAIKNNLAVAFLT 163
           W  F    M +            ++     ++Y + + E+  +    + +++    A L+
Sbjct: 103 WCHFNGIGMTEVYKKYLERGGQPVFRSAKFDLYAKLMMELHRIAEGQDYVRDMKINAALS 162

Query: 164 KIIYQWICLMYADGK---KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
           +++   +   +   K      +R +++ +   L      + ++  ++A    ++ +L ++
Sbjct: 163 QLLILLMEDAWNPDKIPNMSTKRMELQNIKQYLDDHYTDKITMDQLSAEFFINKQYLHKI 222

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           F    G T   Y    R+  A  LL+    S+ E+A+ +   D+ +FS+ F    G  PS
Sbjct: 223 FRETYGITIVNYLNQKRITQAKHLLRFTNLSMEEIAEKIGMTDANYFSRTFFKVEGVRPS 282

Query: 281 AVLK 284
              K
Sbjct: 283 EFRK 286


>UniRef50_C7Q5G1 Transcriptional regulator, AraC family n=1 Tax=Catenulispora
           acidiphila DSM 44928 RepID=C7Q5G1_CATAD
          Length = 292

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 99/284 (34%), Gaps = 23/284 (8%)

Query: 19  PLLINENVISSGISLISLWHTYADEH------------YRVIWPRDKKKPLIANSWVAVY 66
           P    E      +S  +++ T A+EH            + +     +    + N +    
Sbjct: 9   PTAAGEEPWHPPVSEYAVYMTPAEEHRRLGLALYGAGWHTIAEHGIRWDARVLNCYALHL 68

Query: 67  TVQGCGKILLKNG--EQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDI-- 122
             +G G I   +    ++ +      +L P  +HSY  +   W   W  F   +      
Sbjct: 69  VTRGSGWIEWGDRPRTRLPIKAPAAFWLFPGLVHSYQPDVGGWTITWALFDGPAAAGYES 128

Query: 123 --PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD 180
              + + S +         + E+   + +               ++++ I  +  +G   
Sbjct: 129 LDFLSRTSPVVPLGDARP-VRELFRELLTVVRTSGPHYEVSAGILVHRLITAVRDNGPGL 187

Query: 181 PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL 240
            +     + +  L        ++ D A  +  +   LR      TG TPKEY L  RL  
Sbjct: 188 RES----RAVRALTEHATDPVALQDHATRLGLTVTQLREEVRLATGSTPKEYILRVRLSK 243

Query: 241 ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           A  LL     SV +VA  + + D  +F++ F  + G +P+   +
Sbjct: 244 AKDLLAATDQSVVQVARAVGYDDPAYFTRLFTQRVGLSPTMFRR 287


>UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
           29149 RepID=A7B0D2_RUMGN
          Length = 270

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 95/242 (39%), Gaps = 12/242 (4%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPM-DIHSYHCEGLVWEQYWMEFT 115
              + +   Y ++G  ++ +  GE   L  N  +   P    HSY  + + +++  + F+
Sbjct: 31  HFHDFFELYYLLEGE-RMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPFKRIVLYFS 89

Query: 116 PTSMMD----IPVGQQSVIYNGE-----IYNQELTEVAELITSPEAIKNNLAVAFLTKII 166
           P  + +      + ++ +++  E          L  +   I  P    +      L  ++
Sbjct: 90  PDLIANDTICQLLSEKELLFVNEGYIPNQILSLLLSLTHEIDVPGKYHDAYICNQLNGLL 149

Query: 167 YQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226
              + L +   K  P+ R   K +  +H    +  SV  +A  +  S   L   F   TG
Sbjct: 150 LNMLRLDFEAVKSIPKTRS-AKAVDYIHNHYMEDISVNQLAEILYVSPYHLCHEFKNATG 208

Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           KT  +Y    R+  A  L+ +   ++ +++  + F +  HF++ FK   G AP    K  
Sbjct: 209 KTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFKKITGVAPREKKKLY 268

Query: 287 DQ 288
            +
Sbjct: 269 QK 270


>UniRef50_C0X7J7 AraC family transcriptional regulator n=22 Tax=Enterococcus
           faecalis RepID=C0X7J7_ENTFA
          Length = 276

 Score =  188 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 99/280 (35%), Gaps = 11/280 (3%)

Query: 10  VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69
           ++N    N+ +LIN+  IS    L        +  Y    P    +    N WV  Y   
Sbjct: 1   MQNVFTNNVSILINDQPISQEFHLY-------EAGYEKCRPTKPTEFAPINYWVLHYCSD 53

Query: 70  GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQS 128
           G G       E+  +    +  +     + Y+      W  +W+ F              
Sbjct: 54  GEGYFSTPFMEKQHITAGDLFMIPANCRNIYYPNRQNPWTYHWVGFVGDLSSQYLEKIGL 113

Query: 129 VIYNGEI---YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ 185
              N  +    +++L  + + I       N+      +  +  ++        ++  ++ 
Sbjct: 114 TTENCILKGTVDKKLESLFKNIYQEAKKHNHFGSLSESFQLLNYLEHHSVTQHENQSQQL 173

Query: 186 IEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLL 245
             ++   +H +     S++ +A+      ++L +LF RY    P  Y  + +L  A SLL
Sbjct: 174 FNQIKMAIHENFSNNLSISQLASEYNIDRSYLFKLFQRYEQTNPSIYVQNLKLQKACSLL 233

Query: 246 KQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
           ++   ++ E++    F    +FSK F  K    P    + 
Sbjct: 234 RKSSLTITEISFEAGFSSPSYFSKFFFQKKEMTPRQYRQQ 273


>UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM
           15702 RepID=B0MKI2_9FIRM
          Length = 284

 Score =  187 bits (476), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 86/269 (31%), Gaps = 22/269 (8%)

Query: 38  HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97
             YA       +PR    P   N    +Y   G  ++ L +G    +   C   +    +
Sbjct: 17  FPYACYRVTENFPRYNMIPHWHNECEIIYVRSGYFELFL-DGHTHRIDAGCCSLIIGGSM 75

Query: 98  HSYHCEGLVWEQYWMEFTPTSMM---DIPVGQQSVIYNGEIYNQEL-----------TEV 143
           H             + F   +++    I       I N E                   V
Sbjct: 76  HG-GTPKDNCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSADSEPAKDAKAV 134

Query: 144 AELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKL------IATLHASL 197
            + +   E          L  ++   +         +     I+K+      I+ +  + 
Sbjct: 135 IDAMLEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIEQNY 194

Query: 198 QQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVAD 257
           ++  ++ ++A     +  +  R F  YTGKTP EY    R++ A  L+      + ++A 
Sbjct: 195 RKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAM 254

Query: 258 TLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
              F D  +F K FK   G  P    + +
Sbjct: 255 KCGFNDYSYFIKVFKSMKGVTPRDYCRRS 283


>UniRef50_D1BG84 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG84_SANKS
          Length = 297

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 94/289 (32%), Gaps = 13/289 (4%)

Query: 7   SSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVY 66
                 +     P  +    ++  ++   L        +       + +   A   V + 
Sbjct: 14  RDGFAGQRMLVTPRSLVREALTLPVTSRLL--VTDAGVFPHAARHGRSRVSGAEQHVVLV 71

Query: 67  TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMDIPV- 124
              G G      G ++ +     + L   + H Y  +    W  +W         ++   
Sbjct: 72  CTDGAGWCRTPAGTEV-VGRGDAVLLLAGEAHEYGADAEDPWTLWWFHVLGGDAAELVSA 130

Query: 125 ------GQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGK 178
                 G  + + +       +++V + + +        A       + Q +        
Sbjct: 131 GHQASGGPVAHLRDAAPVASLVSQVIDGLDAGTRAGTLQATGAAFHALTQVVATGRRSPG 190

Query: 179 KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARL 238
             P    +E+ +  L A+  +R  VA +AA +  S + L  LF  + G +P  Y    R+
Sbjct: 191 --PSLSPVERALEHLRATSPRRTPVASLAAMVGLSTSRLGALFREHVGVSPNAYQSQLRM 248

Query: 239 DLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
             A  LL     +V  VA    F D  +FS+ F    G APSA    T 
Sbjct: 249 ARARELLDSTDLAVAAVASACGFDDPLYFSRQFARVHGVAPSAYRGRTR 297


>UniRef50_C5RQC9 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           cellulovorans 743B RepID=C5RQC9_CLOCL
          Length = 275

 Score =  186 bits (474), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 92/242 (38%), Gaps = 10/242 (4%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYW 111
              +      +  +   +G G + + N + IT++ N  + L P   H Y+     W   W
Sbjct: 31  HIIRLKGYPHFQWIQCRKGSGMLKINN-QTITINENQAMLLFPHTSHEYYSSSEEWIVDW 89

Query: 112 MEFTPTSMMDIP------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI 165
           +     ++ +I         +   +   E++   + ++ EL  S   IK+  +   +  I
Sbjct: 90  VALNGYAVEEILKNGGIQHSEVFSVSEPELFILRMEKLLELAASYNTIKSLESSKIIYSI 149

Query: 166 IYQWICLMYADGKKD--PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
           +   +     D       Q  ++  ++  +  +  +  ++ D++     +  +L  +F +
Sbjct: 150 LMDILAYTSTDKVDYMINQYSKLRPVLDYIDDNYDKIITLQDLSEVANVTPEYLCTVFKK 209

Query: 224 YTGKTPKEYYLDARLDLALSL-LKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAV 282
            TG    EY  + R+  +  + L ++   + E+A    F D  +F   FK      P+  
Sbjct: 210 TTGIRVFEYINNIRIKNSKEMILSKKNMPIKEIAKNSGFEDVSYFCSMFKKIEKLTPNEF 269

Query: 283 LK 284
            K
Sbjct: 270 RK 271


>UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix
           rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH
          Length = 273

 Score =  186 bits (474), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 89/241 (36%), Gaps = 10/241 (4%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV-WEQYWMEFT 115
                   +Y V+G G     +  ++ +  + +I + P  +H+   +     E   +   
Sbjct: 33  HSHPFAELMYVVRGSGYFRFADNLKLPIQADDLIIINPNVLHTECSDAEGGLEYIVLGID 92

Query: 116 PTSMM-DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI---- 170
                 +        I+N E Y  E+    + I       + ++   +  ++   +    
Sbjct: 93  GVEFYTEQNAHPGVSIHNYEDYKHEILFYIKAILEAGKTHDEMSELIVENLLRVLVLNTM 152

Query: 171 ----CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTG 226
                L+  +       +    L   L+   ++  ++  +A+    ++ +L  +F   TG
Sbjct: 153 RRTTSLLDVETSTGGDNKDCIFLEHYLNLHYRENITLDHLASLTFLNKFYLSHIFKEQTG 212

Query: 227 KTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            +P +Y L  R+  A  LL     S+ +++D + F    +FS+ FK+    +PS+     
Sbjct: 213 LSPIDYLLRKRMIEAKKLLINTDLSITQISDIVGFRSPSYFSQFFKNMECMSPSSFRNKH 272

Query: 287 D 287
            
Sbjct: 273 K 273


>UniRef50_C8Q370 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8Q370_9ENTR
          Length = 293

 Score =  186 bits (473), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 94/253 (37%), Gaps = 15/253 (5%)

Query: 51  RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV--WE 108
               +P     ++   T++G G I    GE      + ++   P  +H Y        W+
Sbjct: 41  FFIHRPEGMKGYMLNLTLKGEGVIRHAEGE-FHCVADEMLLFPPGVLHHYGRAKESPAWD 99

Query: 109 QYWMEFTPTSMM-----------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
             W+ F P               +I         + +    +  +V     + E +   L
Sbjct: 100 HLWIYFIPRPYWIDWLHWDRTEGNIGRMPLGSSADSQQIANQFKDVIRWNAASEPLAEAL 159

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
           A+  L +II +      A   ++ +  +I+ +   L+  L +   + D+A     S + L
Sbjct: 160 AMNTLERIILELFQRQPASNHRN-RDPRIQTVCHYLNEHLAEDVRIDDLARMTYLSSSRL 218

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
             +F +  G T   +    R+  A  LL+Q   S+ ++A  + + D  +FS+ F      
Sbjct: 219 THIFRKEMGNTIFGWRESQRISRACDLLQQTQLSITQIARAVGYEDPLYFSRIFSQHRHL 278

Query: 278 APSAVLKNTDQHP 290
           +P    K  D+ P
Sbjct: 279 SPREYRKKFDRIP 291


>UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM
           20583 RepID=C9LCE8_RUMHA
          Length = 287

 Score =  186 bits (473), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 100/255 (39%), Gaps = 25/255 (9%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWME 113
               +       + G GK  + +G+   +     I L P   H           ++ ++ 
Sbjct: 32  YHAHDFIEFAVIMGGKGKFYI-DGKDYEVEEGDFILLNPGTYHRSKAGYSKEGLKECYIA 90

Query: 114 FTPTSMM-------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKII 166
           F+  S             G   +I   +   + + ++  ++       +      L   +
Sbjct: 91  FSGVSFKGCKSGYFPSFKGNGKIIKMADRMKKNIFQICTVMNKEARECSAGRYFMLKAYL 150

Query: 167 YQWICLMYADG--------------KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
            Q +CL+  +               +   ++  +++++  +  + +++ S+  +AA +  
Sbjct: 151 IQILCLVVREQKEEKQEGEGKGYIFQSTGKKYVVQQIMKYMEENYREKISLEQIAANMYL 210

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLK-QQGNSVGEVADTLNFFDSFHFSKAF 271
           S  ++ ++F   TG TP  Y +  R++ A  +L+      + EVA  + + D++HFSK F
Sbjct: 211 SSFYIAKIFKSETGDTPINYLIRLRMEKAKEILEISPEEPIKEVAAAVGYSDAYHFSKLF 270

Query: 272 KHKFGYAPSAVLKNT 286
           K  +G +P    K++
Sbjct: 271 KKHYGISPLYYKKDS 285


>UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
           1_7_47FAA RepID=C5ET70_9FIRM
          Length = 273

 Score =  186 bits (473), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 94/247 (38%), Gaps = 8/247 (3%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQYWMEFT 115
                +   Y   G  +  + +     L+    I   P    HSY   G+ +++  + FT
Sbjct: 23  HYHEYFELYYLESGK-RYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKRLVLYFT 81

Query: 116 PTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPE--AIKNNLAVAFLTKIIYQW 169
              +        + Q + +Y  +  N+    +  L+   E     +  A+ F+   I   
Sbjct: 82  KEMIAVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSEEALYFILNQILIL 141

Query: 170 ICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTP 229
           +     +  K  ++ +I  +I  LH +     ++ ++A     S  +L R F +YT  T 
Sbjct: 142 LLRNSTETAKPEKQSRITSIIHYLHENYTYPITLNELAEQFYLSPYYLCREFKKYTNSTI 201

Query: 230 KEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
            +Y    R+  A  L  +   SV E++  + F +  HF++ ++   G +PS   K   + 
Sbjct: 202 VQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKSRKQAKER 261

Query: 290 PTDASPH 296
                 H
Sbjct: 262 SAAMERH 268


>UniRef50_A6DM00 Transcriptional regulator, AraC/XylS family protein n=1
           Tax=Lentisphaera araneosa HTCC2155 RepID=A6DM00_9BACT
          Length = 282

 Score =  186 bits (473), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 63/288 (21%), Positives = 121/288 (42%), Gaps = 28/288 (9%)

Query: 2   NGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANS 61
           N  L   ++  E PY +     E V+SS                         K     +
Sbjct: 12  NTNLFFKNINFELPYKLLNFGRERVVSSDYR------------------WHGLKRGKLET 53

Query: 62  WVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE--GLVWEQYWMEFTPTSM 119
            +  YT+ G GK+   N    T+  +  + +   D H Y  +     WE  ++ F  T +
Sbjct: 54  AIWQYTLSGSGKLRSNN-TTYTIQPHQAMLVTSPDDHEYFFDSMDSHWEFIYLSFCGTDL 112

Query: 120 MDI---PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYAD 176
           +      + + S + +  I ++ ++   +L  +P    +   V   +++ YQ+I  ++ +
Sbjct: 113 VQHYKNLIAKTSPVCSLPINSKLISLFLQLTQNPHLSDSQTQVQH-SQLCYQFIMELHQE 171

Query: 177 ---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYY 233
               K+ P  + I+ ++  ++  L Q  S+ +MA+    S     R+F +  G +P EY 
Sbjct: 172 ILADKQKPLPQAIQNVLNHINHHLNQAISIDEMASVAKLSRYHFSRVFSKAIGISPNEYL 231

Query: 234 LDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           +  +++ A  LL  Q  SV ++A    + D  +F K FK  FG++P A
Sbjct: 232 IKTKMEYAQKLLFTQNLSVKQLAHECGYHDPSYFCKVFKKHFGHSPKA 279


>UniRef50_O33813 Lactose operon transcription activator n=4 Tax=Staphylococcus
           RepID=LACR_STAXY
          Length = 279

 Score =  186 bits (472), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 90/237 (37%), Gaps = 14/237 (5%)

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTSMMD 121
           V     QG G      GE   L    I  L+      Y       W  YW+      +++
Sbjct: 40  VLHIVTQGEGTFSYA-GETYHLTAGDIFLLERGMEVEYKPSFSNPWTYYWVGMNGKQILN 98

Query: 122 IPVGQQSVIYNGEIYNQELTEVAELIT---------SPEAIKNNLAVAFLTKIIYQWICL 172
               + S++ +  I  Q+ T++  +I                + L + +L +++Y     
Sbjct: 99  YL-SRCSIVDSHVILGQDTTDIKNIIQLICKLSQSIESNNSNDILIMQYLYQLVYTLQEK 157

Query: 173 MYA--DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
                  + D     I+  +  ++ + Q+  +V D+A ++  + + L +LF +  G +PK
Sbjct: 158 FPKIFSVQVDIVNEDIQHAVDFINTNYQKHITVEDVAKSVNITRSHLYKLFKKNLGCSPK 217

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           EY    R+  A  LL      + +++  + + D   FSK F   F  + S    +  
Sbjct: 218 EYLTYIRMYHASQLLIHTSTLISDISRQVGYKDPLLFSKNFTKHFEISASEYRHHFS 274


>UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788255
          Length = 292

 Score =  185 bits (471), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 26/273 (9%)

Query: 38  HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97
             +    Y+                   Y ++G     + + E I +     IF+   D+
Sbjct: 20  FPFGAYWYQFAPGAHVVDSHWHKEAEIFYVMEGEVLFQI-DSEYIPVRAGEAIFIDGGDL 78

Query: 98  HSYHCEG-LVWEQYWMEFT------------------PTSMMDIPVGQQSVIYNGEIYNQ 138
           H+ H +G        M F                   P         ++      E   +
Sbjct: 79  HTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQERRAAFPRRMTSGTDERLLE 138

Query: 139 ELTEVAELITSPEAIKNNLAVAFLTKIIYQ------WICLMYADGKKDPQRRQIEKLIAT 192
            + E+  L     A         L  +++Q            ++     +  +++K+I  
Sbjct: 139 HIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSRSEAADMTRTERLKKVILY 198

Query: 193 LHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
           + +   +   ++++A  IP SE    R F   TG+TP +Y    R+  A  LL+   N +
Sbjct: 199 IQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQAAELLRSPDNKI 258

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            ++A  + F    +F + F+      PS   K 
Sbjct: 259 SDIALDVGFGHISYFVRVFRKIMNCTPSEYRKK 291


>UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8RL67_9CLOT
          Length = 272

 Score =  185 bits (471), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 94/246 (38%), Gaps = 12/246 (4%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMD-IHSYHCEGLVWEQY 110
           +  K    + +   Y  +G  +  +       +H    +   P    HSY  E + +++ 
Sbjct: 19  NMSKSHYHDYFELYYLEEGE-RFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRL 77

Query: 111 WMEFTPTSMMDIPVGQ---------QSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161
            + F+   +  + + +         +      ++ ++ L ++ +    P+A   +     
Sbjct: 78  LVYFSKEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYIHTL 137

Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
           L   +      +    K   +R +I  +I+ +H + Q+  S+  +A     S  +L R F
Sbjct: 138 LNMALLTIARNIQTPVKP-EKRNRITDVISYIHQNYQEDISIDQLAQMSYVSPYYLCREF 196

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
            RYT  T  +Y    R+  A  +  +   ++ E++    F +  HF++ FK   G  PS 
Sbjct: 197 KRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMTPSN 256

Query: 282 VLKNTD 287
             K   
Sbjct: 257 FRKMYK 262


>UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia
           intestinalis L1-82 RepID=C7G755_9FIRM
          Length = 302

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 104/300 (34%), Gaps = 35/300 (11%)

Query: 7   SSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVY 66
              +  E   N P    +N  S      +        H+              + +  +Y
Sbjct: 11  GESMYFELKENKPHGTKDNPFSIYHIENAGRSFQIPVHW-------------HDEFEIIY 57

Query: 67  TVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY-------WMEFTPTSM 119
              G   + + +GE           + P ++H    +    + +       ++ F    M
Sbjct: 58  VKSGLLTVSI-SGESYIGKAGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDM 116

Query: 120 MD----IPVGQQSVIYNGEIYNQELTEVAELIT-----SPEAIKNNLAVAFLTKIIYQWI 170
           +D     P+    ++ N  + +       +LI      + E      A      I+ Q+I
Sbjct: 117 LDDKLLEPLNSGHLMINPRVKDSAKELCEQLIDIYMAENDETESKITAQIKTKIILLQFI 176

Query: 171 CLMYADG---KKDPQRRQI--EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYT 225
             M+  G   + D   R I  +++++ +  +   + S+ +       SE ++ R F  + 
Sbjct: 177 LEMWKKGFVIENDTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHF 236

Query: 226 GKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
             T  +Y    RL+ A  LL+    SV E A    + +  +F ++FK  +G +P     +
Sbjct: 237 HITLSQYITYLRLENAKQLLQDTDLSVTETAMQSGYQNVSYFIRSFKKAYGISPLKYRNS 296


>UniRef50_UPI0001788A2C transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788A2C
          Length = 284

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 93/278 (33%), Gaps = 14/278 (5%)

Query: 20  LLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNG 79
                   + G                +  P  +  P     +   +  +G  ++   +G
Sbjct: 7   EYAEFIYYTPGYLDKEAQIWPVRAGRSLAKPNYRVGPKRIECYSLHFVHEGTVRLEF-DG 65

Query: 80  EQITLHGNCIIFLKPMDIHSYH--CEGLVWEQYWMEFTPTSMMDI----------PVGQQ 127
           +++ L  N +  L P   + YH           W+    + +  +          P G+Q
Sbjct: 66  KRVDLQKNDLFCLFPGRTYYYHLLPSDAPLRMSWLALDGSRVRPLLELAGLVPESPFGRQ 125

Query: 128 SVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIE 187
            +    E   + + +    +   +   +      +  ++   +    A  +       I 
Sbjct: 126 MISSRVEKSAECVIDALAGVERWKPSVSLELHGLVYGLLAGMVPDA-ASAEPTELAGWIN 184

Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQ 247
           + +  +     +  SV  +A       ++   +F    G  P +Y    R+D A  LL +
Sbjct: 185 ECLDYMELHATEGISVQQVAEFAGVHRSYFSNMFTSQVGMPPLKYLQRIRMDKAKRLLTE 244

Query: 248 QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
              ++ E+A +L + + + F++AFK  F   P  + +N
Sbjct: 245 TDATITEIALSLGYPNLYSFTRAFKIYFKVPPITMREN 282


>UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales
           RepID=A5Z9N2_9FIRM
          Length = 293

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 92/255 (36%), Gaps = 25/255 (9%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQYWMEFT 115
              N    +   +G G + + N    T++   ++F+ P  +HS    +  + E   + F 
Sbjct: 39  HWHNEVELIVIKKGQGLVNV-NLVTYTVNAGDVVFVFPGQLHSISQKDYSIMEYENILFK 97

Query: 116 PTSMM--------------------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155
            + +                     +I     S     +     + E+ +L         
Sbjct: 98  SSLLKSSGYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQ 157

Query: 156 NLAVAFLTKIIYQWIC---LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPC 212
               ++L +I Y  I    L            +I+ +++ +    Q   S+ ++A     
Sbjct: 158 LAVKSYLFQIFYLLISNCGLNQIKPISKKALEKIKTILSYVAEHFQDNISIEEIAGHCFY 217

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           S+++  + F    G +  +Y  D RL++A  LL    + +  +A    F +  +F++ FK
Sbjct: 218 SKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFK 277

Query: 273 HKFGYAPSAVLKNTD 287
            K+G  P    K+  
Sbjct: 278 KKYGITPGKYRKDAR 292


>UniRef50_C7T9S5 Putative transcriptional regulator n=2 Tax=Lactobacillus
           RepID=C7T9S5_LACRG
          Length = 284

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 53/272 (19%), Positives = 104/272 (38%), Gaps = 9/272 (3%)

Query: 21  LINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80
           +  EN       ++    +  +  Y  + PR   +    + ++  + +QG G   + N E
Sbjct: 1   MFKENKWLRTDRIVCPELSVFEVGYEDVHPRAPYQYEQLDYYLLHFVLQGEGLFFINN-E 59

Query: 81  QITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFTPTS----MMDIPVGQQSVIYNGEI 135
              L       + P   ++Y+   G  W   W+            D  +G+ + IY  + 
Sbjct: 60  IHQLSRGQGFLIPPHTDNNYYPLVGNPWSYRWIGVRGPGAAAVFNDAGLGKTNFIYQHQD 119

Query: 136 YNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD--PQRRQIEKLIATL 193
            +Q     AE            A+    +I+   +     + +    P ++   + +  L
Sbjct: 120 IHQMDDLFAEAYDYFSRDHLYGALGKFYEIVSALVDDYQQETRLGVLPNQQYALEAVEIL 179

Query: 194 HASLQQR-WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
                     + D+A  +     +L R+F+R  G +PK Y +  R++ A+ LL+   +++
Sbjct: 180 KREYADSTLRIDDVAERVKVERTYLYRIFMRNLGVSPKSYLMQLRINQAIELLRNTNDAI 239

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           G++A  + F     FSKAF       PSA  K
Sbjct: 240 GDIAIKVGFTSYSQFSKAFVKARRMTPSAFRK 271


>UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae
           ATCC 43184 RepID=A7AA81_9PORP
          Length = 287

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 90/255 (35%), Gaps = 19/255 (7%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104
           +    P +   P         Y  +G   + L+N E I+   N ++ +     H++    
Sbjct: 31  FVSFRPFETFGPHKHLRIEINYVKKGNCILHLEN-ESISFSENEMMVICSNVEHTFEAGS 89

Query: 105 LVWEQYWMEFTPTSMMDIP------------------VGQQSVIYNGEIYNQELTEVAEL 146
                  +EF P                           +   I N     + +  +   
Sbjct: 90  EDTTLMQLEFLPEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVNE 149

Query: 147 ITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADM 206
           +         L V +  +++      +            ++K I+ +  + Q   +++D+
Sbjct: 150 MNQKSKYYQYLVVMYYAELLILIYRYLDEAYLPICTNDSLKKAISYIRLNYQSDITISDV 209

Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266
           A+     E +LR+LF +Y   +P +Y    R++ A+ LL+    SV EV     F    +
Sbjct: 210 ASQTGVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQSPQY 269

Query: 267 FSKAFKHKFGYAPSA 281
           FS+ FK + G +P  
Sbjct: 270 FSRIFKQQMGISPRE 284


>UniRef50_Q6PU53 BgaR n=2 Tax=Bacillus megaterium RepID=Q6PU53_BACME
          Length = 275

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 97/260 (37%), Gaps = 12/260 (4%)

Query: 36  LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPM 95
            ++  +   +R     +++       +  +  ++G G++ + N E   +  N  +FL   
Sbjct: 17  PFYVTSAGSWRHQTHINRQGE--FPDYQWIQCIKGRGELHV-NDEVYIIKENEGMFLTRH 73

Query: 96  DIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQS------VIYNGEIYNQELTEVAELITS 149
             H Y+     W+  W+ F  + M DI +  Q       V+ N E   + L E+   +  
Sbjct: 74  VPHEYYPVTSEWQVCWVSFNGSVMDDIMLSLQFINSGKIVLTNAESLYRMLQELMNRLEE 133

Query: 150 PEAIKNNLAVAFLTKIIYQWIC--LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMA 207
                       L  +I +     +      +  Q  Q+  ++  +     Q  ++  +A
Sbjct: 134 NHTFSTMQCSELLYSVILKLRQDSVYIESKSRLQQITQLNPVLRYIEEYYHQPLTLEVLA 193

Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS-LLKQQGNSVGEVADTLNFFDSFH 266
             +  +E +   LF +  G  P EY    R+  A   LLK    SV +VA  + +    +
Sbjct: 194 QQLSVTEQYTCLLFQQSLGIRPFEYVTRVRIQKAKKLLLKNNQISVQDVARQVGYEHPSY 253

Query: 267 FSKAFKHKFGYAPSAVLKNT 286
           F K FK +    P+   K  
Sbjct: 254 FIKRFKEQENVTPTIFRKMY 273


>UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-like protein n=2
           Tax=Opitutaceae bacterium TAV2 RepID=C0A4H9_9BACT
          Length = 307

 Score =  184 bits (467), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 113/305 (37%), Gaps = 31/305 (10%)

Query: 10  VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69
           V   TP  +P ++             +   +A+ ++       +  P + N +  V    
Sbjct: 6   VNLNTPARLPGILTVQQPEGPYYGRVI---HAESNHYTPPQSRRSPPFVHNHYHIVLVTA 62

Query: 70  GCGKILLKNGEQITLHGNCIIFLKPMDIHSY---------HCE----------GLVWEQY 110
           G G   ++ G+  +     + F  P   H +         + E          G   +  
Sbjct: 63  GRGFFEIE-GKNWSATPGEVFFTSPRQSHQFLNSGRDTTRYAEVTFEFVHPGSGSPIKML 121

Query: 111 WMEFTP--TSMMDIP----VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTK 164
            ++F    ++  ++P    + ++       +   ++  +     +     +    A L +
Sbjct: 122 GLDFAGLLSAWTNLPCEPVLSRRLPKALARVLAGKIEALVNRGRASPQPDDLELGALLAE 181

Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           I+      ++      P   +I+++   +    ++   +  +A     S + L R F   
Sbjct: 182 ILTVVFRNVFRKEAAAP--DKIDQVRDIIRTRYREELHLTTLAKDAGLSPSHLSRRFKAR 239

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            G++P  Y L+ RL  A  LL+ +G S+ E+A  + F D F+FS+ F+ + G AP +  K
Sbjct: 240 FGRSPISYQLELRLQSACELLRTRGESLAEIAAAVGFEDVFYFSRLFRRRLGEAPGSFRK 299

Query: 285 NTDQH 289
            +   
Sbjct: 300 ASQSK 304


>UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi
           DSM 13479 RepID=UPI0001C356F7
          Length = 268

 Score =  184 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 86/258 (33%), Gaps = 19/258 (7%)

Query: 47  VIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV 106
             +     +      +   Y   G  KI + N     +    IIFLKP +IH        
Sbjct: 10  RSYEFHMAESHWHTHYEFYYLYSGHCKIFI-NHTLYYVEPGDIIFLKPGEIHRTTYHSSP 68

Query: 107 WEQYW-MEFTPTSMMDI----------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155
             +   + F    +  +           + + S +         + E+   I   E  ++
Sbjct: 69  VNERVTISFDGEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEYEETGQD 128

Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQR-------RQIEKLIATLHASLQQRWSVADMAA 208
             +        Y+ +  +    + +            IE     ++   Q   ++ ++A 
Sbjct: 129 GFSPLMKKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLEEVAE 188

Query: 209 TIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFS 268
               S A+  R F   TG   KEY  + R+  A  LL     SV E+AD   F D  +F 
Sbjct: 189 LSHMSPAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFG 248

Query: 269 KAFKHKFGYAPSAVLKNT 286
            AF+   G +P A  K  
Sbjct: 249 DAFRKAKGVSPRAFRKMQ 266


>UniRef50_B5JDF7 Transcriptional regulator, AraC family protein n=1
           Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDF7_9BACT
          Length = 274

 Score =  184 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 9/272 (3%)

Query: 25  NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITL 84
           +++ +G +LIS   TY    +      D  +  + + +  +   +G G I  +  +  T+
Sbjct: 2   DILGAGSALISKGDTYPPSIHPSDHYFDWMRGRVLDEFQLLLITKGSGTIETEATDSFTI 61

Query: 85  HGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIP----VGQQSVIY---NGEIY 136
               +  L P   H Y       W ++W+ F  T   ++     +  +   +   + E  
Sbjct: 62  TAPIVFLLYPGVWHRYRPSQDTGWHEHWIAFRGTFADELLRSGLISPEKPFHKTGHSETL 121

Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICL-MYADGKKDPQRRQIEKLIATLHA 195
             ++  + + + +      ++A A L +I+   I L    + +  P R+ I +    +  
Sbjct: 122 LAQVQLIQDEVRAEAHGYRSIAAAALMQILALAITLPQRREEENQPMRKVIRRACFLMRE 181

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
              +     ++AA +     + RR+F ++TG +P  Y+   RL     LL+   NS+ E+
Sbjct: 182 RSDRPLMPEELAAELNIGYTYFRRMFRKFTGISPNRYHAQLRLRRVKRLLRDTSNSIVEI 241

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           AD L F   +H S  FK + G +P    K+  
Sbjct: 242 ADVLGFNSPYHLSNWFKKETGRSPQHWRKDPQ 273


>UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon
           transcriptional activator RhaR n=2 Tax=Clostridiales
           RepID=C4Z204_EUBE2
          Length = 277

 Score =  183 bits (466), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 84/250 (33%), Gaps = 20/250 (8%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQ-YWME 113
              +       Y   G     + +          ++ +    +H     G    +   + 
Sbjct: 26  GAHVHPFNEIFYLSSGECTSFI-DHNIYKFGKGDLVIVPSGCLHRTTYNGKGMHERIVIS 84

Query: 114 F-----------TPTSMMDIPVGQ---QSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159
           F           T   +M+  +            +     L ++     SP+ +      
Sbjct: 85  FRNEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALLDKLIFENDSPDELSPAFIK 144

Query: 160 AFLTKIIYQWICLMYAD----GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
             L +++   I     +     + D   R I+++   ++       S+  +A     S +
Sbjct: 145 VGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNLSRS 204

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           +L + F   TG   KEY ++ R+  A +LL +   S+ ++A    F DS +F  AF+   
Sbjct: 205 YLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFRKAK 264

Query: 276 GYAPSAVLKN 285
           G +P    KN
Sbjct: 265 GISPHKYRKN 274


>UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi
           DSM 13479 RepID=UPI0001C353D2
          Length = 286

 Score =  183 bits (466), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 93/269 (34%), Gaps = 25/269 (9%)

Query: 35  SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94
           + ++   + H +   P              ++ + G   + + N          I+ +  
Sbjct: 19  AGYYHVTESHPQYAMPYHW-----HEELELIHIISGTFHVTI-NETTRNAVPGDILLVNS 72

Query: 95  MDIHSYHCEGLVWEQYWM-------------EFTPTSMMDIPVGQQSVIYNGEIYNQELT 141
             +H       V+E                         D+ + +     +    +  L 
Sbjct: 73  GGLHGGTPYDCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAGDDTAIHSLLE 132

Query: 142 EVAELITSPEAIKNNLAVAFLTK---IIYQWICLMYADGKKDPQRRQI---EKLIATLHA 195
            +  L+   +       +  L +   ++ Q      +D       R I   + ++  + A
Sbjct: 133 RLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNVLNYIEA 192

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
              ++ ++ ++A T   S  +    F   TG+TP +Y    R++ A  LL   G+S+ ++
Sbjct: 193 HYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIGHSITDI 252

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           A    F D  +F++AFK   G +P   LK
Sbjct: 253 AMLCGFNDVSYFTRAFKKYKGISPGQYLK 281


>UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           phytofermentans ISDg RepID=A9KIW0_CLOPH
          Length = 300

 Score =  183 bits (466), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 84/243 (34%), Gaps = 9/243 (3%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQY 110
            K  P   N     Y   G G+  ++  E + +  N +I L P  +H+         E  
Sbjct: 56  WKSLPHSHNFAEFFYITNGSGQFSVE-KEILDVKANDLIILNPTIVHTEISNPSKPMEYI 114

Query: 111 WMEFTPTSM---MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167
            +              +   S  +  +++      +A  + S +  +N +    L  I  
Sbjct: 115 VLGIEGIKFQAEDQGYILLNSSAHKSDLHL-YFNSLAHEMKSEQPYRNFVCQNLLNIIFT 173

Query: 168 QWICLMYADGKK---DPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
             +                R+       +  + Q+  ++  +++ +  ++ +    F + 
Sbjct: 174 MILRNDAFKISIVSGPKLTRECNIAKKYIEENYQENITIETLSSLVHLNKYYFVHNFKKQ 233

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            G +P  Y +  R++ ++ LL    +S+  ++  + F    +FS+AFK      P    K
Sbjct: 234 FGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYFSQAFKRMTNITPQEYKK 293

Query: 285 NTD 287
              
Sbjct: 294 MYK 296


>UniRef50_A8YXG2 Raffinose operon transcriptional regulator n=9 Tax=Lactobacillus
           RepID=A8YXG2_LACH4
          Length = 274

 Score =  183 bits (466), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 108/273 (39%), Gaps = 15/273 (5%)

Query: 24  ENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQIT 83
            N+ +  I    L++     H    +  +     +  ++V  Y + G G         + 
Sbjct: 6   HNLSNPHIESYILFYGQQKCHPNEYFESN----NLQKNYVLYYILSGEGTFSSNGHHTVN 61

Query: 84  LHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPT------SMMDIPVGQQSVIYNGEIY 136
           L    +  +       +  +    WE  W+    +         ++P            +
Sbjct: 62  LSQGDLFLIPRNTTCFFKADKDNPWEYLWLGLAGSDTKKIIEASNLPNKNFLRQIKRTEF 121

Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG---KKDPQRRQIEKLIATL 193
              L E+ E++   +++  NL +A LT   + ++   + +    +K P+  Q +  I  L
Sbjct: 122 YSILLELYEMLNKRKSLLTNLKIASLTSQFFYYLVKEFPNHPPVRKTPKNDQYQIAINYL 181

Query: 194 HASLQQR-WSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSV 252
             +      ++ ++   +  S ++L  LF   T  +P++Y +  R++ A   L+   +++
Sbjct: 182 QKNYTDPNCNIVELCNRLGVSRSFLYSLFRENTNISPQKYLMQLRMEAAKKELQNTTSNL 241

Query: 253 GEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            E+A  + + D F FSKAFK   G +P+   +N
Sbjct: 242 KEIAHKVGYGDEFTFSKAFKRYSGVSPNVFRRN 274


>UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales
           RepID=C7GFI0_9FIRM
          Length = 291

 Score =  183 bits (466), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-E 103
           Y   W      P         Y + G G   ++N   +++  + +I + P   H+     
Sbjct: 28  YEGDWQSH---PHTHQFSELFYVISGKGVFYIEND-TVSVCADDLIIINPHIEHTEKTMS 83

Query: 104 GLVWEQYWMEFTPTSM----MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAV 159
                         +      +    +    YN           ++++      +     
Sbjct: 84  NDPMTYIVFGVEGLAFYFNSQNAANPKGYSYYNYGSAKTHFINFSQIMIKEFNARKPGFE 143

Query: 160 AFLTKIIYQWICLMYADGK---KDPQRRQIEK----LIATLHASLQQRWSVADMAATIPC 212
           A    ++   +  +  +           QI K        + A+  +  ++  +A     
Sbjct: 144 AICHGLLQVLLVYITREQHLSVISDTTLQISKECFVAKKYIDANYAKNITLDLLAEITHI 203

Query: 213 SEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFK 272
           ++ +L   F  Y G +P  Y ++ RL  +  LL     S+ EVA +  F    +FS+ F+
Sbjct: 204 NKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQSYFSQIFR 263

Query: 273 HKFGYAPSAVLK 284
              G +P    K
Sbjct: 264 KNTGMSPLQYRK 275


>UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           cellulolyticum H10 RepID=B8I993_CLOCE
          Length = 276

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 108/279 (38%), Gaps = 18/279 (6%)

Query: 15  PYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKI 74
              I  ++ E  IS  I +  + +    EHY+        +     ++   +  QG GK+
Sbjct: 1   MERIFSVLTERDISLPIFVTGVGY----EHYQD----HVTRKEGFPNYHLAFCEQGVGKL 52

Query: 75  LLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPV------GQQS 128
           ++ N  +  +      F  P   H Y+     W   W+ F+ +S+  +         +  
Sbjct: 53  IICN-REYLIEQKTAFFFYPNVPHEYYPVAEPWSLRWIIFSGSSVHTLLNAAGIGRFEVY 111

Query: 129 VIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR--RQI 186
           ++ + E       ++ +++   ++     A   L   +     L+     +   +  +++
Sbjct: 112 MLNSPEEVTFCCNKLHKILLEKKSTSMLEASGVLYNFLANINKLIEEVNSEGDTQLIKKL 171

Query: 187 EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLK 246
             +I  +  + ++  ++ ++A     S ++L R+F +  G +P  Y L  R++ A   L 
Sbjct: 172 NSIIGFIKNNFKKDITLEELATHAGISSSYLCRIFKKEYGISPFTYILRCRVNAAKEELI 231

Query: 247 Q-QGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
                S+  ++    F    +F   FK   GY+P+   +
Sbjct: 232 NFPDKSIKAISLDTGFNSCSYFGSVFKEYEGYSPNRFRE 270


>UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA
           RepID=C5EQL5_9FIRM
          Length = 290

 Score =  183 bits (464), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 86/251 (34%), Gaps = 19/251 (7%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWME 113
           +P   + +   Y + G  ++ + + +   L     + + P+ IH   + EGL  E+Y M 
Sbjct: 36  RPHYHSYYEIYYLLSGQCRMFI-DQDIYYLKPGDAVIIPPLQIHRALYEEGLQAERYDMY 94

Query: 114 FTPTSMMDI------------PVGQQSVIYNG--EIYNQELTEVAELITSPEAIKNNLAV 159
           FT                    +  +  I           L+ ++      +A  +    
Sbjct: 95  FTKEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHENGQEDAYSHVQQQ 154

Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQ---IEKLIATLHASLQQRWSVADMAATIPCSEAW 216
           + L +I+           +KD        I K    ++   ++  ++  MAA    S  +
Sbjct: 155 SLLFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREHLTLDAMAAMSNMSPTY 214

Query: 217 LRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFG 276
             R F   TG   KEY    R+  A  LL+    +V  +A    F D  +F   FK   G
Sbjct: 215 FSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDGNYFGDVFKKLTG 274

Query: 277 YAPSAVLKNTD 287
            +P        
Sbjct: 275 LSPREYRNGIR 285


>UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=Clostridium
           cellulovorans 743B RepID=C5RGS5_CLOCL
          Length = 293

 Score =  183 bits (464), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 92/283 (32%), Gaps = 22/283 (7%)

Query: 25  NVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL--KNGEQI 82
           N + +   L   +    + +Y   W   K      +    +Y + G  +I +   N   +
Sbjct: 4   NSLYNPKLLNKDYRPIINTYYFRQWINYKMDYHTHDRVEIMYVIDGQCEIDVATDNVNNL 63

Query: 83  TLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMMDIPVGQQSVIYN--------- 132
            L     I L    +H     G        +EF+     DI    + +I           
Sbjct: 64  KLKKGDFILLDAGTVHRLIVLGEKSCRMLNIEFSFIEDSDILTSIRLLIEKVKSIALLFE 123

Query: 133 ----------GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ 182
                            L  +   +                +++ +   +  ++      
Sbjct: 124 MRCPFLLLKDNNDIYHSLKNIVIQLGMESEENQFSIQLLFYELLLKISKVAMSNENTSTS 183

Query: 183 RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLAL 242
              I K    +  +  +  ++ D+++ +  +E +L R+F ++TG T  EY    R++ A 
Sbjct: 184 NIYINKAKHFISMNYDKDITIKDISSYVNINEDYLNRIFKKHTGHTITEYVTLFRIEKAK 243

Query: 243 SLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            LL      + ++   +      +FS+ FK   G +P    K+
Sbjct: 244 MLLSNTDIPIIDICSYVGINSRQYFSQVFKKCTGISPYKYRKS 286


>UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype
           B' RepID=UPI00016C01F8
          Length = 265

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 103/230 (44%), Gaps = 8/230 (3%)

Query: 64  AVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEFTPTSMM-D 121
               ++G G +     E        I+F+    ++SY       +++YW  F    +  D
Sbjct: 34  LYLILEGEGSVTCNKTEYYP-EVGDIMFVPKGSLNSYATNKDKPYKKYWCHFDADILSTD 92

Query: 122 IPVGQQSVIY----NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG 177
           I V     +     N +I  +   ++ +   S   I    A A L +II+ +        
Sbjct: 93  IAVYLSFPLLVKNANKKISYKLFAKLVKYHESKNPIDAIYAKALLLRIIHFYFSECEFVK 152

Query: 178 KKD-PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDA 236
             D P +  + KL+  +  +L+++ ++ ++A     +  +L  LF    G+TP EY  + 
Sbjct: 153 INDVPNQTVMGKLVKYIDENLERKITLTELAKFAHLNANYLCTLFSSTFGQTPIEYITNK 212

Query: 237 RLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           +++ A  LL+   +++ E+++TL F   F+FS  FK + GY+PS   ++ 
Sbjct: 213 KIEKAKILLRTTTDTIEEISNTLGFSSPFYFSAVFKKRIGYSPSQFRQSR 262


>UniRef50_A4BF96 Arabinose operon regulatory protein n=1 Tax=Reinekea blandensis
           MED297 RepID=A4BF96_9GAMM
          Length = 287

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 96/253 (37%), Gaps = 17/253 (6%)

Query: 51  RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY--HCEGLVWE 108
               +P     ++   TV G G +     ++ T+    ++ L    +H Y  H +   W 
Sbjct: 36  FWIDRPNGLKGYIINMTVSGAGLVFPGTDQERTVAKGDMMILPASAVHDYGRHPDYHNWY 95

Query: 109 QYWMEFTPTSMMD--------------IPVGQQSVIYNGEIYNQELTEVAELITSPEAIK 154
             W+ F P +                 + + +Q       + +     V +       + 
Sbjct: 96  HRWIYFRPRATWHDWLDWTDKHMNVGFLSLSKQPSDVEANVIDGLFQNVEQNSKRQSILS 155

Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE 214
             L++  L +I+ +    +      +P   +I +    +H ++    ++ ++A     S+
Sbjct: 156 EELSLNLLEQILIR-CRELDHSKPMEPIDARILRACQFIHDNIASELTIDELAQVACMSQ 214

Query: 215 AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK 274
           +    LF +    + +++  D R+ LA  LL     ++ +VA  L + D+ +FS+ FK  
Sbjct: 215 SRFSHLFKQQKNVSVRQWIEDQRIALARQLLITTDLAINQVAQYLGYQDALYFSRVFKKN 274

Query: 275 FGYAPSAVLKNTD 287
            G +P    ++  
Sbjct: 275 LGESPREFRQSQR 287


>UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella
           RepID=C8NIW5_9LACT
          Length = 282

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 89/246 (36%), Gaps = 13/246 (5%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQYWMEFT 115
                    Y + G G+ +++  ++  +  N  + + P   H+         E   +   
Sbjct: 37  HTHPFTELFYVIDGKGEFIIQ-HQRFPVKANDFVIINPQVEHTEVSSPDSPLEYIVVGIQ 95

Query: 116 PTSMMDI--------PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167
             S  ++        P    ++    +   + L  + +  T+     + +    L  ++ 
Sbjct: 96  GLSFSNLTPVDQGGHPFSFFNLRDEQKDILRYLNAMVQEATNQALSYDLVCHNLLEILLI 155

Query: 168 QWICLMYAD---GKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           + +   + D   G      + I  +   L    ++   +  +A+    S  ++   F + 
Sbjct: 156 KILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRESIQLEALASMTHLSRFYISHSFKKE 215

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
            G +P EY +  R+  +  LL+    S+ +VAD + F    +FSK F+   G +P+   +
Sbjct: 216 VGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFTTPTYFSKQFRKITGISPTDYRE 275

Query: 285 NTDQHP 290
              +  
Sbjct: 276 KYQKES 281


>UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
           27756 RepID=A5KPF1_9FIRM
          Length = 260

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 84/252 (33%), Gaps = 11/252 (4%)

Query: 43  EHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC 102
             Y       +  P         Y + GCG  +++  E   +    +I + P   H+   
Sbjct: 8   SSYSKYEQDWESYPHTHYFSELFYVLNGCGSFIVEE-ESFPIRKQNLIIINPSIRHTEVS 66

Query: 103 E-GLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQ----ELTEVAELITSPEAIKNNL 157
           +     E   +     + + I   ++ +    E +++        +   +   +     +
Sbjct: 67  DKNSPLEYIVLGVEGLNFL-IYNDKEYLNIQCEDFSENLDFYFHTILREMDEQKESYETI 125

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQRRQIEK----LIATLHASLQQRWSVADMAATIPCS 213
               L  +I Q      +  +  P  ++I +        + ++ ++  ++  +A     +
Sbjct: 126 CQNLLEALIIQLSRHTGSPVEMLPSSKKITRECSYAKRFIDSNFRENITLDTLAELTHLN 185

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
           + +    F    G  P  Y    R+  +  LL     +   +A    F  S +FS+ F+ 
Sbjct: 186 KYYFAHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFSSSSYFSQCFRK 245

Query: 274 KFGYAPSAVLKN 285
             G  P+A  K 
Sbjct: 246 ICGMTPTAYRKQ 257


>UniRef50_B0N996 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
           35704 RepID=B0N996_EUBSP
          Length = 258

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 87/245 (35%), Gaps = 7/245 (2%)

Query: 46  RVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI--HSYHCE 103
                  + +      +  +Y  +G G   L   +   L    I+  +P +   +SY+ E
Sbjct: 4   FKTKDYTQNRAAGRVDYQLIYIHKGAGHYYLH-KKWENLSAGNILLFRPHEPQTYSYYFE 62

Query: 104 GLVWEQYWMEFTPTSMMDIPVG---QQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVA 160
               E YW+ FT     +I          I    +      E+   +   +     + ++
Sbjct: 63  EHP-EIYWIHFTGNECKEIIQKYNLHNCYIGEHSLLKTLFQEIIIELQIKKPYFEEMVLS 121

Query: 161 FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
              +I+                   I +L+  L+      W++  MA     S  +   L
Sbjct: 122 NFLQILATIARSHQQILSPLENDFSINRLVIQLNQKYMDDWNIESMAEYCKLSTGYFSHL 181

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           F +  G  P +Y  + R++ A  L+     ++ ++A  + F DS +FS+ FK   G  P 
Sbjct: 182 FKKRMGSAPMKYLTELRIEKAKELIATNSMNLSDIAQMVGFTDSLYFSRVFKKTTGIPPK 241

Query: 281 AVLKN 285
              ++
Sbjct: 242 EFQQS 246


>UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales
           RepID=C6LDG4_9FIRM
          Length = 369

 Score =  182 bits (462), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 100/268 (37%), Gaps = 25/268 (9%)

Query: 40  YADEHYRVIWPRD--KKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97
           +    Y    P D          S   ++  +G G+I      Q       I  + P  +
Sbjct: 102 FPFNIYPCTIPGDFPSVALHWHKSMEIIFVKKGTGRIQTGRNMQ-EARSGDIFVMPPGTL 160

Query: 98  HS-YHCEGLVWEQYWMEFTPTSM---------MDIPVGQ------QSVIYNG-----EIY 136
           H+ Y   G   E   + F    +          +  V        Q  +++      +  
Sbjct: 161 HAIYAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASGQLLQPAVFSPVDAGYKQI 220

Query: 137 NQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD-PQRRQIEKLIATLHA 195
           +  L    EL ++ E        A L +++   + +     ++D P   ++++++  +  
Sbjct: 221 SACLRRAEELCSARERGYELGVKAALLELLLYLLRMCPEAPERDTPDMERLKRVLQRIEQ 280

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
              +  +V DMAA   CS +   R F R TG +P  Y  + RL  A   L++  + +  +
Sbjct: 281 DYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLAAAAENLRETDDKILVI 340

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           A+   F +  +F++ FK ++G  P A  
Sbjct: 341 AENAGFENLSNFNRQFKKRYGVTPRAYR 368


>UniRef50_B0NXL6 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
           RepID=B0NXL6_9CLOT
          Length = 282

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 51/291 (17%), Positives = 109/291 (37%), Gaps = 24/291 (8%)

Query: 3   GKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW 62
           G L  S     +P        E  +     +++  H Y    YR     +          
Sbjct: 7   GVLPKSQYFFFSPS-------EQFLKYNYGVVNCGHFYCHFGYRREREGNAYP------- 52

Query: 63  VAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDI 122
           + +Y  +G   +   + +        I  +     H+Y+ +    E Y+  F   +  +I
Sbjct: 53  LFIYVAEGELHLE-HDSQHEVAKKGEIFLIDCSKPHAYYVDKE-CEFYYFHFAGRAAYEI 110

Query: 123 ---PVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG-- 177
               +          I +  + +  +L  SP   +  ++   L+ + YQ +C++ A    
Sbjct: 111 TKDLILDNKGCLFHIINSDRIRKQMDLTISPLFYEQPISDVSLSCMAYQCLCMLQASNDV 170

Query: 178 ---KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYL 234
              ++  +   +   +  +   L  + ++ +++     S  +   LF   TG +P EY  
Sbjct: 171 FTTEESDENSMLSSTMTYIREHLGHKLTLEELSRQASLSPYYFAHLFKEETGISPIEYVA 230

Query: 235 DARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
             +++ A ++LK   NS+ E+AD L +     F  AFK + G +P+   + 
Sbjct: 231 MTKINYAKNILKTTENSITEIADLLGYSSDASFINAFKKRAGLSPARFRRK 281


>UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
           49176 RepID=C4G7L2_ABIDE
          Length = 272

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 88/249 (35%), Gaps = 10/249 (4%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE- 103
           Y   WP                   G G+  ++N     L     I + P   H+   + 
Sbjct: 28  YENDWPSFM---HTHPFTELFLVTGGVGEFYVENN-IYPLKKGDFILVNPNASHTEKSDE 83

Query: 104 GLVWEQYWMEFT--PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161
               E   +       ++ D      + I       + +  +       +A  +++    
Sbjct: 84  KNPLEYIAVAVDNFSLNLTDTNHLMFNCISKNPNIIKYMDSMLAEQEGNKAYSDHICQNI 143

Query: 162 LTKIIYQWICLMYADGKKDP---QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218
           L  I+ + + +  +D   +P     ++  KL   + ++   + ++ D+A     ++ +L 
Sbjct: 144 LEIILIEILRITKSDIDTEPTVNASKECFKLKKYMDSNYASKITIDDLAKLSNLNKYYLI 203

Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278
             F +Y G +P  Y    R+  A  LL+    S+ +++ +  F    +F++ F    G +
Sbjct: 204 HSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQSTGFSSQSYFTQCFIKSCGLS 263

Query: 279 PSAVLKNTD 287
           P A    T 
Sbjct: 264 PKAYRNRTK 272


>UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA
           RepID=C6JFK6_9FIRM
          Length = 283

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 96/262 (36%), Gaps = 25/262 (9%)

Query: 48  IWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLV 106
                       +    +Y   G G + L N E + +    +I +    +H    +   +
Sbjct: 21  CEIFHSLYNHWHDEMELIYIESGSGLVRL-NKEILRVKAGDLIIVNRGVLHGIKTDLKNI 79

Query: 107 WEQYWMEFT----------------PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSP 150
                + F                  + +MD       +I   +     +  + + I S 
Sbjct: 80  LYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHIISRSDDNYGNICLLFDRIHSC 139

Query: 151 EAIKNNLAVAFLTKIIYQWICLM-------YADGKKDPQRRQIEKLIATLHASLQQRWSV 203
              K       L  + + +   M        AD  ++     I+K++  ++ +  Q  + 
Sbjct: 140 HKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKDENKSLASIKKILDYINLNYSQPLTA 199

Query: 204 ADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFD 263
           A++ A    SE +  +LF +YTGKT   Y  D R++ A  +L    +SV E+A  + F +
Sbjct: 200 AELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSDSSVTEIALEVGFNN 259

Query: 264 SFHFSKAFKHKFGYAPSAVLKN 285
           + +F K F+   G +P    +N
Sbjct: 260 TSYFIKKFQQATGMSPHKFRRN 281


>UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
           DSM 10507 RepID=C0CH60_9FIRM
          Length = 278

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 93/242 (38%), Gaps = 9/242 (3%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFT 115
              +     Y V G GK L +N E   +    ++ + P   H+    +G   E Y +   
Sbjct: 37  HTHHFTELFYVVSGEGKFLFRN-ETHHIKTGDLVIIPPYLEHTEQSVKGKSLEYYVIGID 95

Query: 116 PTSMM----DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI- 170
             S +       +       +    +    ++   + + +     +    L  +I + I 
Sbjct: 96  KISFLAENGQTGIQAFCNFRDQSSVSDIFAQMLYEMRNDDYGSEIICQNLLEILILRIIR 155

Query: 171 --CLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
              L+      +   ++  ++   L  +  +R ++  + +    ++ ++   F +Y G +
Sbjct: 156 SQRLIPISINSERMTKECAQIKEYLDTNYTERITLDTLTSLTHMNKYYMAHSFAKYAGLS 215

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           P +Y    RL +A +LL+   +SV ++A +  F    +F+++F+  +G  P    +   +
Sbjct: 216 PIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQSYFTQSFRKYYGMTPLQYRQQNAE 275

Query: 289 HP 290
             
Sbjct: 276 TS 277


>UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE
          Length = 286

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 22/253 (8%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS--YHCEGL----VWEQY 110
              ++W   Y V G G   +            ++ + P  IH   Y+ +           
Sbjct: 34  HQHDAWELYYVVHGQGN-RMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEEGHVRYL 92

Query: 111 WMEFTPTSMMDIPV-------------GQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
            + F+ + +                       +  G   ++ +  +   I   + ++   
Sbjct: 93  MVAFSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESSRIIRRILSEINEMDELERLS 152

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
           A+  L  +I+       A      +R  R+++++ A +        ++ D+A  +  + +
Sbjct: 153 AMFRLLPVIFTSSDYTLAGKPMRIERDVRRMQQICAYVMKHYVHSIALDDIAEEVGMNRS 212

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
                F R  G T  ++    RL+ A  LLK     V E+   + F D  HF + F +  
Sbjct: 213 AFCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGFNDLPHFVRVFTNTM 272

Query: 276 GYAPSAVLKNTDQ 288
           G +P+   K    
Sbjct: 273 GMSPTKYRKQYKN 285


>UniRef50_C6CSQ7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CSQ7_PAESJ
          Length = 285

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 61/273 (22%), Positives = 111/273 (40%), Gaps = 12/273 (4%)

Query: 17  NIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILL 76
           NIP ++ E           +W   AD  Y+V  P     P +  +W       G G I L
Sbjct: 18  NIPYVLEELPPQPPCRFQLIWKVQADIAYQVANPTGFSSPGLFATWE------GKGVITL 71

Query: 77  KNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM---MDIPVGQQSVIYNG 133
              EQ  L     I + P    +Y C    W+ Y++EF    M   +++PVG        
Sbjct: 72  G-SEQHELVAGTYIIVPPDTPTAYRCLNGNWKFYFLEFDSLDMALGLNLPVGIPVSTAKM 130

Query: 134 EIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATL 193
               +    +   +    A     +   + +++  +    +A+  +  +  +++ ++  +
Sbjct: 131 AEAARMNERLINNLIMKPAGYAYDSHLAMQELLLLFARERHAN--RSGRHPELDDILYRM 188

Query: 194 HASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVG 253
           H ++ Q + +         S       F   TG +P +Y  + +L  A + L+    SV 
Sbjct: 189 HQTIGQAFPIEKWVQQSGLSRNAFFTRFRERTGMSPNQYMQELKLAAAKTSLETTQASVK 248

Query: 254 EVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           E+A  L F+D FHFSK FK ++G +P A  ++ 
Sbjct: 249 EIAAALQFYDEFHFSKLFKKRYGMSPRAYRRDA 281


>UniRef50_UPI0001788DE5 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788DE5
          Length = 285

 Score =  181 bits (459), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 88/262 (33%), Gaps = 15/262 (5%)

Query: 36  LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPM 95
                      +  P     P I+ ++   + + G   +   + + +TL       L P 
Sbjct: 23  GGIWILRAGRSLARPNYSVGPKISENYALHFVLNGKISLAFGD-KVVTLSAGDAFCLFPH 81

Query: 96  DIHSYH-CEGLV---WEQYWMEFTPTSMM----DIPVGQQSVIYNGEI---YNQELTEVA 144
             +SY    G         W+     +       I +   +   +  +       L ++ 
Sbjct: 82  TRYSYWEPNGDPEPTLRMQWIVLDGEAAESALTRIGLHPSTPFLHNVMKGGLQAVLDQIY 141

Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVA 204
             +              L ++         A  K++ +   +E+ +  + +   +  +V 
Sbjct: 142 GCVDDDTIGHEFGRQKRLYQLFELLAA---APAKRETKPNWLEQSVHYMDSHYMEGITVT 198

Query: 205 DMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDS 264
           D+          L   F+R  G +P  Y +  R++ A  LL +   SV EVA +L + + 
Sbjct: 199 DVVHQAGVHRTHLYCEFIRVHGISPSHYLMKLRMERAAVLLTETDVSVTEVAFSLGYSNL 258

Query: 265 FHFSKAFKHKFGYAPSAVLKNT 286
             FS+AF   +  +P++     
Sbjct: 259 HTFSRAFAKYYRISPTSYRLQH 280


>UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D3K3_PAESJ
          Length = 296

 Score =  181 bits (459), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 98/262 (37%), Gaps = 14/262 (5%)

Query: 36  LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIF--LK 93
                 D+HYR         PL+    +  YT  G G    +  E + +         + 
Sbjct: 31  GQDVIRDQHYRWDGLTRNDGPLL----LFQYTFDGEGIYE-RGTETLRIQAGQAFMTEIP 85

Query: 94  PMDIHSYHCEGLVWEQYWMEFTPTSMMDIP------VGQQSVIYNGEIYNQELTEVAELI 147
               + +  +G  W   ++   P+ ++         +G    +  G    + L  + E  
Sbjct: 86  GDHRYYFPPDGSHWSFIFVLIRPSLILPNWEEVKKQLGDTPFLPAGSRPIRLLQSMYEEA 145

Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADGK-KDPQRRQIEKLIATLHASLQQRWSVADM 206
            +    +   A +++ + I +      A  +       ++++ ++ + A  +   S+  +
Sbjct: 146 HAGRVKEPYTASSYVYQFISELCRFALAPQEDAKEWPLKVKEAVSYIDAHYENMISLDQL 205

Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266
           A  +  S+  L RLF R  G +P +Y    R+  A+ LLK+   SV  +A+ + +    +
Sbjct: 206 ADQLSLSKYHLLRLFTRTVGMSPNDYLNQVRIKEAIRLLKESDWSVERIAEQVGYSGGSY 265

Query: 267 FSKAFKHKFGYAPSAVLKNTDQ 288
           F K F+   G  P +      Q
Sbjct: 266 FIKWFRKITGETPGSFRHGEGQ 287


>UniRef50_C6JAN7 Helix-turn-helix domain-containing protein n=2 Tax=Ruminococcaceae
           RepID=C6JAN7_9FIRM
          Length = 291

 Score =  181 bits (459), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 102/273 (37%), Gaps = 13/273 (4%)

Query: 27  ISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHG 86
             S  +  SL +       +V  P         +S++      G G+++ + G   +L  
Sbjct: 21  TPSNFARTSLLYLQEIGSLQVHKP-HSTGRSNLSSYLFFTVTDGEGELICE-GRTYSLRT 78

Query: 87  NCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSM----MDIPVGQQSVIYNG---EIYNQE 139
              +F+     +++     +W   W+ F   +M              +++      + + 
Sbjct: 79  GDCVFIDCRKQYAHSSSEKLWSLSWIHFYGPNMTAIYDKYLERGGRAVFHPVSVSGFLEI 138

Query: 140 LTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP----QRRQIEKLIATLHA 195
              + EL  S + I++    + L  ++   +   +  G+K      +++ +  +   L  
Sbjct: 139 CHRIYELADSDDYIRDMKINSELNYLLTLLMNESWHPGEKHRDADLKKQNVLPVKQYLDE 198

Query: 196 SLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEV 255
             Q++ S+  +A     S+ +L R+F    G +   Y ++ R+  A  +L+     +  +
Sbjct: 199 HYQEKISLDFLAEHFFISKYYLTRVFREQFGVSISSYLMNRRVTKAKYMLRFSNEKIKTI 258

Query: 256 ADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
                  +  +FS+ F+   G +P    +  ++
Sbjct: 259 GYKCGLGEPHYFSRVFRQMEGMSPLEYREKWEK 291


>UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=Yersinia
           RepID=A4TH83_YERPP
          Length = 292

 Score =  181 bits (459), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 10/271 (3%)

Query: 32  SLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIF 91
               + +      +         +         ++ + G G I L+N     +    + +
Sbjct: 21  FSTLVNYRILRAGHIRAADNFHVRRQSVAGHELIFCLNGSGFIRLENN-LHEVKKGNLAW 79

Query: 92  LKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPV------GQQSVIYNGEIYNQELTEVA 144
           L     H +       WE  W+      + +I               + E        + 
Sbjct: 80  LPVRWPHEHFPNKQEPWEILWLRIDGAKLNNIMQILDVAQQPVFEFTSPETITDIYHRLF 139

Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDP--QRRQIEKLIATLHASLQQRWS 202
           +L+ S   + +       +++IY  +     D  K P    R + +LI  +H+     W 
Sbjct: 140 DLMQSHTLVADAHCDVLCSQLIYTLLENRSFDATKSPVISHRGLGRLIYQIHSHYNDDWD 199

Query: 203 VADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFF 262
           +         S++ L RLF     ++P  +  + RL  A  LL +   ++  +A  + + 
Sbjct: 200 IDKFMQYCQVSKSQLFRLFQETFNQSPLRWLKNYRLSQARRLLVETEETISRIAGLVGYN 259

Query: 263 DSFHFSKAFKHKFGYAPSAVLKNTDQHPTDA 293
           D  HFS+ F    G +PS   +   Q   D 
Sbjct: 260 DPLHFSRDFHRSVGLSPSDFRRQERQLDNDR 290


>UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium
           prausnitzii M21/2 RepID=A8S9Z6_9FIRM
          Length = 285

 Score =  181 bits (459), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 90/269 (33%), Gaps = 24/269 (8%)

Query: 40  YADEHYRVIWPRDKKK--PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97
           +    Y    P D ++       S   V+  QG G + +        +   I    P  +
Sbjct: 18  FPFNLYPCTIPGDFQQVALHWHESMELVFVKQGMGLVQVG-VVTYPAYRGDIFIFAPGTL 76

Query: 98  HSY-HCEGLVWEQYWMEFTPTSM---MDIPVGQQSVIYNGEIYN---------------- 137
           H+    EG   E   + F P  +    D+   +  +       +                
Sbjct: 77  HALRQAEGQRMEYENIIFEPELLGGAEDLCAEKYLLPLQSGRLSLPVRLTPNDLCYLQAA 136

Query: 138 QELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA-DGKKDPQRRQIEKLIATLHAS 196
             L E+ +   +       L    L + +   I         +    ++++ ++  L A 
Sbjct: 137 ACLRELEDANRAKRPGYELLVKGALLRFLALLIAQGRQCLSTETADTQRLKTVLQWLSAH 196

Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256
             +   VAD A     S +   R F + TG++   +  + RL+ A   L+    +V  +A
Sbjct: 197 YAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAFLNEYRLNTAAEALRTTDETVLTIA 256

Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
               F +  +F++AFK  FG  P    K 
Sbjct: 257 SRCGFENLSYFNRAFKAHFGMTPRDYRKK 285


>UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella
           formatexigens DSM 14469 RepID=C6LHD5_9FIRM
          Length = 288

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 92/250 (36%), Gaps = 12/250 (4%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS-YHCEGLVWEQY 110
           +  K    N +   Y   G  +  +   +   +    +I   P  +H  Y    + +++ 
Sbjct: 38  NMMKSHYHNYYEIYYLEDGE-RYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKRI 96

Query: 111 WMEFTPTS---------MMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161
            + F  +          + +     +      +  ++ L E+     +P     +     
Sbjct: 97  VLYFESSEVASKELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYRRTL 156

Query: 162 LTKIIYQWICL-MYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRL 220
           L   ++  +      + ++  +  +  ++++ +H+  Q+  ++  +A     S+ +L R 
Sbjct: 157 LNMFLFTMLMHTRRREPEQMEETGRTTQIVSYIHSHYQEDITLEQLAQKFYVSQFYLCRE 216

Query: 221 FLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPS 280
           F RYT  T  +Y    R+  A   L +   ++ E++    F +  HF++ FK   G  PS
Sbjct: 217 FKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVTGTTPS 276

Query: 281 AVLKNTDQHP 290
              K+     
Sbjct: 277 GYRKHHQNMQ 286


>UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D1W6_PAESJ
          Length = 264

 Score =  180 bits (458), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 107/259 (41%), Gaps = 13/259 (5%)

Query: 41  ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSY 100
              H+         +P     W+ VYT++G G      GE+I      ++ L+    H+Y
Sbjct: 10  VTGHFLENESYCMVRPAGREDWLLVYTLEGEGFFRTPAGEKI-CKAGELVLLRKRVPHTY 68

Query: 101 HC-EGLVWEQYWMEFTPTSMMDIPVGQQ---SVIYNGEIYNQELTEVAELITSPEAIK-- 154
              +G  W   W+ F     + +   ++     + + E+  + +     L+    A    
Sbjct: 69  GTVKGDTWNFLWVHFNRLPELSLLPDEEVLLCPLPSSELQRRVIRIFRSLLHDSRAQGGF 128

Query: 155 -NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCS 213
              L    L+ +I      +      D    ++ +++  L A +Q+  S+ ++AA +  S
Sbjct: 129 WEELCDNQLSALILLMAGQL-----ADKLDYRVSQVMRILSAQMQEPLSINELAARVGLS 183

Query: 214 EAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKH 273
            + L  LF   TG++  +   + RL+ A+ L+ Q G + GE +  + F    HF+  F+ 
Sbjct: 184 ASRLSHLFKSETGRSIVDTLNNMRLEQAVLLMLQAGRTAGEASFDVGFQSYNHFAALFRR 243

Query: 274 KFGYAPSAVLKNTDQHPTD 292
           ++G  P+   + T+   T 
Sbjct: 244 RYGCGPAEYKRKTESTSTP 262


>UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
           29149 RepID=A7B0Y7_RUMGN
          Length = 276

 Score =  180 bits (458), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 87/242 (35%), Gaps = 11/242 (4%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFT 115
              +    ++ V G G     N EQ  L    ++ + P   H+         E Y +   
Sbjct: 37  HTHHFTELLFVVSGEGSFSF-NQEQSPLRRGDLVIIPPYTEHTERSSQNHPLEYYVLGID 95

Query: 116 PTSMM--------DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIY 167
             S +         +    +      E++ Q L E+       + I  +L    + KI  
Sbjct: 96  GISFLSQKDRECAQVFCNFEHDPSIHELFRQMLYEIRTAQYGSQTICQHLLEILILKI-I 154

Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
           +   L+          ++  ++   L ++  +  ++  +      ++ ++   F +Y G 
Sbjct: 155 RSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHITLDTLTGLTHMNKYYMVHSFTKYAGL 214

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +P +Y    RL  A  LLK    S+ ++A +  F    +F++ F+  F   P    +   
Sbjct: 215 SPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSYFTQIFRKNFNMTPVKYRQEHA 274

Query: 288 QH 289
           ++
Sbjct: 275 KN 276


>UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU
          Length = 280

 Score =  180 bits (458), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 89/253 (35%), Gaps = 13/253 (5%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-E 103
           Y   W     +    +     Y  +GCG   +   E   +  N  + + P  +H+    +
Sbjct: 29  YEGDWH---SQLHSHHFTELFYVTKGCGGFKIGADE-FNVQENDFVIINPNTMHTEVSRD 84

Query: 104 GLVWEQYWMEFTPTSMM-DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFL 162
               E   +     S        +  +  N   Y  E+     L+      KN L     
Sbjct: 85  RNPLEYIVIAIDGISFEIPEDSLKDYISCNYANYKNEILFYLNLMVKESQAKNELYDDMC 144

Query: 163 TKI-------IYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
            ++       I +   +  +  +    R++I  +   +  +  +  ++  +A     ++ 
Sbjct: 145 QQLMQVLLINILRLNRINVSLTQGKTIRKEIFMIKNYIDRNYHKEITLDTLAEKTHMNKF 204

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           +L   F    G +P  Y L  R+  +  LL+    S+ +++  L F    +F++AFK   
Sbjct: 205 YLAHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGFSSLSYFAQAFKKST 264

Query: 276 GYAPSAVLKNTDQ 288
            ++P    KN  +
Sbjct: 265 NFSPLQYRKNHQK 277


>UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum
           alkenivorans AK-01 RepID=B8FM47_DESAA
          Length = 277

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 96/246 (39%), Gaps = 14/246 (5%)

Query: 54  KKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWME 113
               + + +     ++G  +++ + G  + +    +  + P + H+   E      + + 
Sbjct: 32  FSRHVHDGFSIGIVLEGK-RVIDQKGASVVIGPKDVFLINPGEPHACKSEDGKHTYFTIC 90

Query: 114 FTPTSMMDIPVG-----QQSVIYNG-----EIYNQELTEVAELITSPEAI--KNNLAVAF 161
             P ++           Q++  ++      E  N  + E   L+    +   K    ++ 
Sbjct: 91  VEPEALKSFASQISEKAQETPYFSCLAAKDEELNSLIREFMTLVQKSGSTMEKEASLISI 150

Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
           L+  I ++        +  P  + + +    +     +  ++ ++A     S  + +RLF
Sbjct: 151 LSTAILRYGDNPPEIRRISPHVQAVNRAREYIKTHYAENLTLKELAGVACLSPFYFQRLF 210

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
           L   G +P ++ +  R+  A  +L Q   S+ + A  + F D  HF++AFK   G +P  
Sbjct: 211 LENVGISPHDFLIQYRIKKAREMLDQGS-SLADAALDVGFTDQSHFTRAFKRVTGISPGR 269

Query: 282 VLKNTD 287
            ++N  
Sbjct: 270 YIRNLQ 275


>UniRef50_C6D456 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D456_PAESJ
          Length = 283

 Score =  180 bits (457), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 83/257 (32%), Gaps = 15/257 (5%)

Query: 40  YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99
                  +  P  K  P     +   +  +G  ++  + G Q+ L    +  L P   + 
Sbjct: 27  PVRAGRCLAKPHYKVGPKRIECYSIHFVREGRLRLEYE-GRQVELARGDLFVLFPDRTYY 85

Query: 100 YH--CEGLVWEQYWMEFTPTSMM----------DIPVGQQSVIYNGEIYNQELTEVAELI 147
           Y         E  W+      +             P  + +V    E       E  E +
Sbjct: 86  YDMLPAERPLEMRWLAIDGDRVEALLQLAGLTEQEPFRRGTVSSRIEAAADRAIEALERV 145

Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMA 207
                         L  ++   +  +   G+       I +    +     +  +V  +A
Sbjct: 146 QRWRPAVALELQGHLYGLLSALM--LEEAGQGPELASWIHECAEYMELHATEGITVQQVA 203

Query: 208 ATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHF 267
                  ++  ++F    G  P +Y    R++ A  LL     SV E+  +L + + + F
Sbjct: 204 EFAGVHRSYFTQVFTEEMGMPPMKYMQKVRMEKARRLLIDTHASVTEIGLSLGYPNLYTF 263

Query: 268 SKAFKHKFGYAPSAVLK 284
           ++AFK  F  +P A+ K
Sbjct: 264 TRAFKMYFKESPLALRK 280


>UniRef50_C6CXJ2 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CXJ2_PAESJ
          Length = 289

 Score =  180 bits (457), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 93/258 (36%), Gaps = 16/258 (6%)

Query: 50  PRDKKKPLIANSW---VAVYTVQGCGKILLKNGEQITLHGNCIIFL--KPMDIHSYHCEG 104
           P           +   +  YT+ G G I  +  + I L       +       + Y  E 
Sbjct: 30  PDYSFTGDERPDFGHVIFQYTLNGLGYIEYE-QQCIPLPRGTGFLVKVPSKHRYFYKSED 88

Query: 105 LVWEQYWMEFTPTSM---MDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161
             WE  W+  +        D+ + Q+  I   +  +  +    +L+ S  A +       
Sbjct: 89  EPWEVLWLNLSGDEASRIWDLVIAQEGPIIRRDPNSPIIHAFRKLLRSI-AEEKITDKYQ 147

Query: 162 LTKIIYQWICLMYADGKKDPQR------RQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
           L+  +Y+W+  +    ++  +         I++    +     Q  ++  +A     ++ 
Sbjct: 148 LSAKVYEWMIALVQTSREVSREISTSSSSLIQRAKDFMKQHYAQPLTLDQLAEHCGVNKY 207

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
            L RLF +    +P  Y  D R++ A++LL+     V  + +   F +S +F K F+   
Sbjct: 208 HLCRLFQKSDQTSPLAYLRDRRMEAAVALLRTTELPVQTIGEMCGFENSSYFGKVFREYM 267

Query: 276 GYAPSAVLKNTDQHPTDA 293
              P        + P DA
Sbjct: 268 SMTPKEYRMKKIEFPYDA 285


>UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales
           RepID=A7VID9_9CLOT
          Length = 289

 Score =  180 bits (457), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 109/298 (36%), Gaps = 35/298 (11%)

Query: 10  VKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQ 69
           +  E   N P    ++  S+     +        H+              + +  +Y   
Sbjct: 1   MYFELKENKPHGTKDDPFSTYHIENAGQSFQIPVHW-------------HDEFEIIYVKS 47

Query: 70  GCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY-------WMEFTPTSMMD- 121
           G   + + +GE           + P ++H    +    + +       ++ F    ++D 
Sbjct: 48  GFLTVNI-SGENYIGKPGDAFVVSPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDD 106

Query: 122 ---IPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKI-----IYQWICLM 173
               P+    ++ +  + +       +LI   EA K+   +   T+I     + Q+I  M
Sbjct: 107 RLLEPLDSGRLMISPSVKDTIKELCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEM 166

Query: 174 YADG---KKDPQRRQI--EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
           +  G   + +   R I  +++++ +  +   + S+ +       SE ++ R F  +   T
Sbjct: 167 WEKGFIVENNTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHIT 226

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
             +Y    RL+ A  LL+    SV E A    + +  +F ++FK  +G +P    K  
Sbjct: 227 LSQYVAYLRLEYAKQLLQDTDISVTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKKQ 284


>UniRef50_C6IZ62 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786
           str. D14 RepID=C6IZ62_9BACL
          Length = 293

 Score =  180 bits (457), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 89/261 (34%), Gaps = 19/261 (7%)

Query: 35  SLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKP 94
           + + +  D  Y          PL+    +  YT+ G G   L       +        + 
Sbjct: 26  AGYDSITDPSYYWDGLERTDGPLL----LFQYTLSGEGVFELGE-RSHRVTAGQAFLAEI 80

Query: 95  MDIHSYHCEGL---VWEQYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAELI 147
              H Y+        WE  ++ F P               +V Y  E        +A +I
Sbjct: 81  PSSHRYYYPQEASAPWEFLFLLFRPNVVLPLWRKFLSEAGAVPYLPEDSAPV--RLARMI 138

Query: 148 TSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQ-----IEKLIATLHASLQQRWS 202
            +             +  +YQ++  +        + ++     +++    + ++  Q  S
Sbjct: 139 ITDAGAGRITDPYIASSCVYQFVTELARMQVTSQKNKENWPESVKRAAELMESNYAQMIS 198

Query: 203 VADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFF 262
           +  ++  +  S+  L R F   TG TP  Y    R + A+ LL+    S+  +A+ + + 
Sbjct: 199 IDQLSEHVGLSKYHLIRRFSDSTGLTPGAYLTRVRTEKAMDLLRGTSLSIETIAERVGYS 258

Query: 263 DSFHFSKAFKHKFGYAPSAVL 283
              +F KAF+   G  P    
Sbjct: 259 SGSYFIKAFRRLTGLTPGEFR 279


>UniRef50_UPI0001C35596 transcriptional regulator, AraC family protein n=1 Tax=Clostridium
           hathewayi DSM 13479 RepID=UPI0001C35596
          Length = 279

 Score =  179 bits (456), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 86/241 (35%), Gaps = 6/241 (2%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104
           +R   P  K +P +       Y + G  +  +  G    +    +I +      S     
Sbjct: 17  HRKCTPNWKIEPHVIPFIDITYVIDGKAEYNIG-GRTYIVKKGDLICIPQNTFRSAVNIP 75

Query: 105 LVWEQYWME--FTPTSMMDIPVGQQSVIYNGEIYNQELT---EVAELITSPEAIKNNLAV 159
               + +    F              +I +  I  + ++   E+ E     +        
Sbjct: 76  EDLMECYSTNIFLRNQFGQEAYLPVPIISHIGIIPRLISRFHEIHEEWVQKDFGYMLKIR 135

Query: 160 AFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRR 219
             L  I+YQ   L+  +     +  +I+  I  +     +  ++  MA        +   
Sbjct: 136 GILCLILYQISNLILNENHLSQEDPRIKSSIRYMSLHYAEPLTIDRMAEQFHLHPVYYGS 195

Query: 220 LFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAP 279
           LF    G T K+Y +  RL+ A ++LK    SV EVA    F D F+FSK FK K G  P
Sbjct: 196 LFREAMGMTFKQYLISLRLNYAENMLKSGEYSVSEVALQCGFSDIFYFSKLFKEKKGIPP 255

Query: 280 S 280
           S
Sbjct: 256 S 256


>UniRef50_C4FY02 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271
           RepID=C4FY02_9FIRM
          Length = 282

 Score =  179 bits (456), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 98/257 (38%), Gaps = 16/257 (6%)

Query: 40  YADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS 99
           + +   +   P    +  +   ++  +   G G + + N     L  N    L+      
Sbjct: 17  FDECGIQQFEPYQVYQYTVYQPYIIHWIASGKGSLEVDN-HCYPLTANQGFILRRGQQVK 75

Query: 100 YHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQE------LTEVAELITSPEA 152
           Y+ +G   W  YW+ F+   + +     Q    +   +  E      + ++     S   
Sbjct: 76  YYADGKEPWRNYWIGFSGQRLEEFLQFTQLADAHCIQFQDEGQCQAIIQDICHFNLSQTQ 135

Query: 153 IKNNLAVA------FLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADM 206
             N           FL     + + L     + +    ++       +A+  +  +V  +
Sbjct: 136 DANTFYWQMMKIFDFLYHAHLELVSLSAPRQQSNSSPAEVAAAYI--YANYARPITVESI 193

Query: 207 AATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFH 266
           A  I  S + L RLF ++  ++PK++ ++ RL  A  LL +  +S+  +A ++ + D   
Sbjct: 194 AQYIGMSRSALFRLFRQHYRQSPKQFLMETRLRQARQLLVESQDSIKTIAASVGYSDQLV 253

Query: 267 FSKAFKHKFGYAPSAVL 283
           FSK FK  FG +PS   
Sbjct: 254 FSKIFKKTFGLSPSDYR 270


>UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
           ATCC 43243 RepID=B7AP83_9BACE
          Length = 278

 Score =  179 bits (456), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 98/252 (38%), Gaps = 22/252 (8%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIH--SYHCEGLVW---EQYW 111
              + +  VY   G   IL+ +     +    ++ + P +IH  SY     V        
Sbjct: 26  HSHDCYELVYLFSGECNILV-SHTIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQRTALR 84

Query: 112 MEFTPTSMMDIPVGQQSV--------IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163
                T  +   +G+  V        I   +   + +  +   +     + + L++  + 
Sbjct: 85  FSIKDTDWLCSALGKDFVKDNLTAGIIEVPDKRKEYIENLITRMIYENQMPDELSMGMVK 144

Query: 164 KIIYQWICLMYA--------DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
            +  +++  +            + D Q   I+ +   ++ +  ++  + D+A     S +
Sbjct: 145 TLFQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATYVYNNYDKQIYLDDVAKQFSISRS 204

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
           +L + F + TG   KEY L+ R+  A  LL +  +S+ ++A    F DS +F  AF+   
Sbjct: 205 YLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGFNDSNYFGDAFRRIK 264

Query: 276 GYAPSAVLKNTD 287
           G +P+    N D
Sbjct: 265 GISPNKYRHNRD 276


>UniRef50_A6B487 Arabinose operon regulatory protein n=3 Tax=Vibrionaceae
           RepID=A6B487_VIBPA
          Length = 279

 Score =  179 bits (455), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 96/244 (39%), Gaps = 15/244 (6%)

Query: 55  KPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWM 112
           +P     ++   T QG G I   N +   +    ++   P   H YH   +   W   W+
Sbjct: 36  RPNGMKGFIINITSQGEGTIFHGN-DAFDVKTGDLLLFPPSATHFYHRKKDNASWFHRWV 94

Query: 113 EFTPTSMMD----IPVGQQSVIYNGEIYNQELTEVAELITSPE-------AIKNNLAVAF 161
            F P +  +        +  V     + N  ++++  L    E         +++LA+  
Sbjct: 95  YFRPRAFWNDWLCWHEQRNGVYLTQGLDNSTISQIERLFIDIEYISKSDMPYRDDLAINL 154

Query: 162 LTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
           L +++ +    +  D    P   ++ + +  +  +L Q +++ D+A     S + L  LF
Sbjct: 155 LEQLLIR-CKTIQPDVVSKPLDPRVIEAMNYMTQNLNQNFTLEDIADFTCLSASRLGHLF 213

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
               G T  ++  D R+  A  LL     SV  +   + + D  +FS+ FK K G +P  
Sbjct: 214 RDEVGMTITQWRDDQRISRAKQLLVTTNYSVNHIGRIVGYTDPLYFSRVFKRKAGASPKL 273

Query: 282 VLKN 285
             + 
Sbjct: 274 YREQ 277


>UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus casseliflavus
           RepID=C9AXU1_ENTCA
          Length = 299

 Score =  179 bits (455), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 97/288 (33%), Gaps = 24/288 (8%)

Query: 31  ISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCII 90
           +      +     +Y V   R    P    +   ++  +G  KI +++ + I L  N  +
Sbjct: 2   VFPQETNYAKITAYYSVALERFSMDPHQHPACEIMFVTKGKCKIKVQD-QVIVLERNDFV 60

Query: 91  FLKPMDIHSYHCEGLVWEQYWMEF------TPTSMMDIPVGQQSVIYNGEIYNQ------ 138
           F+     H+   EG       +EF      +   + D+    +  +   E Y +      
Sbjct: 61  FINAFVEHALLVEGDSCTILNIEFLLSETPSGLCVRDVFAYIKGNVQLNEPYAKSRDVRQ 120

Query: 139 ---------ELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKL 189
                    +L  + +    P A +         +++ +    +    +       +   
Sbjct: 121 FGQAIKSLLQLLMIDDTQEQPSAERQFTIELLFKRMLMELAFSL-RTKETKRGNCYVNAA 179

Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249
           I  +     +   V+ +AA +  ++ +L +LF    G T   +    RL  A  LL    
Sbjct: 180 INYIQQHFDEDIQVSQIAAAVGITKTYLHKLFHEQLGVTVNHFLTSERLKQAAFLLSNSQ 239

Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH-PTDASPH 296
             + E+A    F    HF+  FK K G +P A      Q    +A  H
Sbjct: 240 LPIVEIAAQAGFNSRQHFTNTFKQKKGMSPKAYQLLYKQTIKEEAGQH 287


>UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC
           43185 RepID=A5ZHU6_9BACE
          Length = 284

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 88/252 (34%), Gaps = 22/252 (8%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH-----CEGLVW-EQY 110
              ++W   Y V G GK  +            +  + P  +H +       +   +    
Sbjct: 34  HRHDAWELYYVVHGYGK-RMAGDTLQPFAAGDVALIPPSMLHHWEYSPDSADDDGYVRYL 92

Query: 111 WMEFTPTSMMDIPV-------------GQQSVIYNGEIYNQELTEVAELITSPEAIKNNL 157
            + F+ + +                     + +  G   +Q +  +   +   + +    
Sbjct: 93  MVAFSHSLVERCMAVFPELRNRLTGITFPTNALKFGTGSSQTIRRILSQMNDMDELGRLC 152

Query: 158 AVAFLTKIIYQWICLMYADGKKDPQR--RQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
            +  L   I+      +A    + +R  R+++++   +        S+ D+AA +  + +
Sbjct: 153 EMFRLLPAIFTSSDHTFAGKPMNIERDVRRMQQICVYVMTHYIHTISLDDIAAEVGMNRS 212

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
                F R  G T  +Y    RL+ A  LLK     V E+  T+ F D  HF + FK+  
Sbjct: 213 AFCSYFKRCKGMTFSQYVTQYRLNTACELLKHSQKQVSEICFTVGFNDLPHFVRVFKNTL 272

Query: 276 GYAPSAVLKNTD 287
           G +PS   +   
Sbjct: 273 GMSPSKYRRRFQ 284


>UniRef50_C6CS68 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CS68_PAESJ
          Length = 288

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 7/245 (2%)

Query: 52  DKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQY 110
             ++  +   W  VY   G G   + +GE   +    +   +P   + Y  + G  W++Y
Sbjct: 44  HFRQGAVFQYWAIVYIAGGSGTYRVDHGEAQRVTAGSLFLFQPGFHYDYGPDPGGYWDEY 103

Query: 111 WMEFTPTS----MMDIPVGQQSVIYNGEI--YNQELTEVAELITSPEAIKNNLAVAFLTK 164
           +     T     +   P+   +V++ GE       +  +  L+ S      + A   L  
Sbjct: 104 YFTIEGTRYREWLEHWPILPNTVMHPGEDASSQNRIDRIFALMDSGTPADADRAALTLES 163

Query: 165 IIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRY 224
           ++Y W+    +      +  ++ +L+  L  +L + +  A  A     + + LRR    Y
Sbjct: 164 LLYDWVQSCQSSPAAQGKTARLAQLLEALSGTLHEPFDAAAFAERHHWALSTLRRTVSEY 223

Query: 225 TGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           TG    EY    ++  A + L     +V E+A  L + D F+FS+ FK   G AP    +
Sbjct: 224 TGFALHEYVHRLKMAEAKNRLLNTEQTVKEIAAALGYGDVFYFSRLFKKITGEAPRLFRR 283

Query: 285 NTDQH 289
           N    
Sbjct: 284 NMRSK 288


>UniRef50_B5ZUS0 Transcriptional regulator, AraC family n=10
           Tax=Rhizobium/Agrobacterium group RepID=B5ZUS0_RHILW
          Length = 274

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 7/245 (2%)

Query: 51  RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY 110
           R         S+  V   +G G +      +++L G  + +L P   HSY  +   W++ 
Sbjct: 29  RHAVTDRKLPSFAVVLVERGQGWLETAASGRLSLTGPALFWLFPNRAHSYSPDEDGWDER 88

Query: 111 WMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAEL-------ITSPEAIKNNLAVAFLT 163
           W  F  +   D    +     +  +    L +VA L       +     +    A   L 
Sbjct: 89  WALFEGSFTRDFVRLRIIAERHPVVALHRLDDVARLFGTLHADLLDDTHLGQASAALMLH 148

Query: 164 KIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLR 223
           +I+           ++  +R  +  ++ TL     Q   +A  AA    S A LRR F  
Sbjct: 149 RIVISAARQAIGAAERRQERPDMAVIVETLRRRAMQPLDLAAFAAEHQMSPATLRRRFTL 208

Query: 224 YTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
            TG  PK + L AR+D A  LL      +  VA  +   D F+FS+ F  + G +P    
Sbjct: 209 ETGLPPKAFQLRARMDHAKQLLATTDEKIEAVAAMIGLEDPFYFSRVFHEREGCSPREFR 268

Query: 284 KNTDQ 288
               +
Sbjct: 269 ARYRR 273


>UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4
           Tax=Geobacillus RepID=C9RVZ3_GEOSY
          Length = 513

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 63/174 (36%), Gaps = 7/174 (4%)

Query: 116 PTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYA 175
                +  V    ++    I  + L   A   ++ E  +  L            I     
Sbjct: 347 GRKAEETFVWLGRLLSELGIRYERLASFASCRSAAELKRAALDE-------LDRIAADLE 399

Query: 176 DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLD 235
             ++     ++ K    +     +  ++ ++A     S  +  +LF  + G T  +Y  +
Sbjct: 400 VWRQQQAYGKLGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTN 459

Query: 236 ARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
            R++ A   L +   S+ E+  ++ + D  +FS+ FK + G +PS   K     
Sbjct: 460 VRIERAKEALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQAR 513


>UniRef50_UPI0001788D3A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001788D3A
          Length = 291

 Score =  178 bits (453), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 91/269 (33%), Gaps = 14/269 (5%)

Query: 36  LWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPM 95
           LW   +  H        K  P     +   +   G  +    +G  ++L    +  L P 
Sbjct: 27  LWIFKSGSHPFFTE---KVGPRSVEFYSIHFVASGKVRFGW-DGSSVSLSEGDLFCLFPG 82

Query: 96  DIHSY--HCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNG-------EIYNQELTEVAEL 146
            +++Y   C+       W  F    M  I                  +     + ++  L
Sbjct: 83  SVYTYVKDCDEPSTMITWTAFMGELMPSILNHVDLCPERPYRRNAFRDDALAVIKDIQRL 142

Query: 147 ITSPEAIKNNLAVAFLTKIIYQWICLMYAD-GKKDPQRRQIEKLIATLHASLQQRWSVAD 205
           +  P+   +   ++   ++I+                   +E +   +     +  SV +
Sbjct: 143 LRQPQQDHSLQLMSLGFQLIHSIDPNRDQHLPAASAASDWLESVPGYMGLHCTENLSVEE 202

Query: 206 MAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSF 265
           +AA      +   R F R  G +P  Y     ++ A  LL  +G S+ + A +L + D F
Sbjct: 203 LAAWAGVHRSHFTRAFTRRYGISPSRYMQQLIMEKATRLLSAEGTSITQTALSLGYSDLF 262

Query: 266 HFSKAFKHKFGYAPSAVLKNTDQHPTDAS 294
            FS+AF   FG  PSA +K        + 
Sbjct: 263 TFSRAFTRYFGMTPSAFVKANRPSSRTSE 291


>UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp.
           Y412MC10 RepID=UPI0001789C33
          Length = 293

 Score =  178 bits (453), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 75/251 (29%), Gaps = 22/251 (8%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLV--WEQYWMEF 114
              +     Y  +G G   +++ + I +    +  +     H +           Y   F
Sbjct: 34  HTHDFIEISYVEEGSGYHYVED-QLIPIKRGDLFVIPIGTSHVFRPSSQDNQLVIYNCIF 92

Query: 115 -------------TPTSMMDIPVGQQSVIY------NGEIYNQELTEVAELITSPEAIKN 155
                          T +  +  G              + +   +  +            
Sbjct: 93  RTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKFDKFLSIMHGMFREYLKKGPRYE 152

Query: 156 NLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEA 215
            L +  L +++                   ++  I  ++       +V  +A     S +
Sbjct: 153 FLMMGQLIQVLAMLQRYECDGSMVSTPTNNMDDAIQYINDHFATNLTVQQVAERSFMSPS 212

Query: 216 WLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKF 275
             +RLF + TG T  ++  + R+     LLK    S+ E A+ + + D   F   F+ K 
Sbjct: 213 HFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSLFRKKT 272

Query: 276 GYAPSAVLKNT 286
           G  P    ++T
Sbjct: 273 GVTPREYRRST 283


>UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D3A6_PAESJ
          Length = 291

 Score =  178 bits (453), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 107/299 (35%), Gaps = 40/299 (13%)

Query: 18  IPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLK 77
           +   + EN + +  +L  +   +         P           +  +Y   G     + 
Sbjct: 1   MRSDLWENTVMTDPAL-PINVFHPTFGIGCSLPLHW-----HEHFELIYVESGEVLYTIG 54

Query: 78  NGEQITLHGNCIIFLKPMDIHSYHC--EGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEI 135
            G+        ++F+   ++HS         +  Y + F P+ +    + +  ++     
Sbjct: 55  -GQPFPTKPGDMLFVNSGELHSAASLNPNEPFTVYALVFNPSIL---GLKEPHIVDLVAP 110

Query: 136 YNQELTEVAELITSPEAIKNNLAVAFL--------------------TKIIYQWICLMYA 175
           Y   ++ +A  I   +++   L    L                     ++++ W+   + 
Sbjct: 111 YTNGMSMIASRIEQTDSLYPLLKQTTLRLAGEFEQKPRGYELAVRSYCQLLFTWLSREFT 170

Query: 176 DGKKDP--------QRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
             ++          +  + ++L+  L + + +R +V   A+ +  S     R+F + TG+
Sbjct: 171 VMQRSDTEMNAFRARTNRFKELLTRLESDVAERVTVEQAASFVHMSPYHFCRMFKKITGQ 230

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
           T  +Y    R++ A  LLK    SV ++A  +       FSK F+   G +P  + K  
Sbjct: 231 TFVQYMNLNRINRAEYLLKNTAMSVTDIAAEIGCSSINSFSKLFRQLRGVSPRDLRKGQ 289


>UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D3K6_PAESJ
          Length = 277

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 87/275 (31%), Gaps = 20/275 (7%)

Query: 29  SGISLISLWHTYADEHYRVIWPRDKKKPLIANSW-VAVYTVQGCGKILLKNGEQITLHGN 87
           S  SLI        E      P  +       ++   +   +G G   + +G+   +   
Sbjct: 9   SPASLIGGSEFNCHEASPFQHPLHR-----HETFSELLLVEEGRGTF-VVDGKPYEVGPG 62

Query: 88  CIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVG------QQSVIYNGE------- 134
            ++       H        +   +  F    +   P        Q  VI  GE       
Sbjct: 63  TVLLYHRGIWHEEWSTHYPFRATYFAFKDLQVKGCPQNYFLGPDQAPVIELGEKTDETAS 122

Query: 135 IYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLH 194
           +  + L E+   +    A  N+L    L ++               P    + K    + 
Sbjct: 123 LVRECLAELHSGLAESRAAANHLFGLLLARLARLVPGESTERRIVKPAEAAVIKARGYIE 182

Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254
            + QQ  ++  +A     S+ +L  LF +  G +  ++ +  R++ A   L   G  V E
Sbjct: 183 ENYQQPITLEQLAKVTFVSKYYLSHLFQQEVGISVIQFLIQCRMEAAKRYLIMTGRPVKE 242

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
           + + + +     F   FK   G  P    ++  + 
Sbjct: 243 IGELVGYQSEPTFHNLFKKVTGLTPGQFRESAREK 277


>UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271
           RepID=C4FXH3_9FIRM
          Length = 298

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 10/270 (3%)

Query: 24  ENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSW-VAVYTVQGCGKILLKNGEQI 82
              I+     +S  H        V +  +    +  +++    Y + G G +L + G   
Sbjct: 4   RYTITHKPEEVSQNHFQVLSVNIVSYDANWHSTMHHHNFAEIFYCLDGSGYLLTEFGRT- 62

Query: 83  TLHGNCIIFLKPMDIHSYHCEG-LVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELT 141
            +H + ++ + P   H+ H       +   +      ++       + +++ E  N +  
Sbjct: 63  PIHKHSLLLVNPFIEHTEHTSLISPLKYLVIGIKGPEIILPSHATDNGLFSFEDSNHQFY 122

Query: 142 EVAELITSPEAIKNNLAVAFLTKIIYQWICLM-------YADGKKDPQRRQIEKLIATLH 194
            +   + +   +    +   +  +I   I  +        A  ++ P    +      + 
Sbjct: 123 RLIREVMTECELNQPYSSQIIDHLINSLILRLNNLANSQLAMARETPLSASVSLAKHYID 182

Query: 195 ASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGE 254
               +  ++  +      S   L   F    G +P  Y    RL  A  LL     +V +
Sbjct: 183 NHFSKNINLEQLEERAHVSRFHLAHQFKEELGLSPINYLNQVRLTQAQELLLTTNYTVLQ 242

Query: 255 VADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
           + + + F    +FS  F    G  P A   
Sbjct: 243 ITEMVGFNSVSYFSNKFHEAVGMTPRAYRN 272


>UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium
           RepID=B1QXT7_CLOBU
          Length = 289

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 90/254 (35%), Gaps = 20/254 (7%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE--GLVWEQYWMEF 114
            I       +  +G G   L++   + +    +I + P  +H+          E   +  
Sbjct: 37  HIHPFMEIFFITEGNGSFQLEDS-TVNVKEYDLIIINPNCLHTEKSNLNTSPLEYIVLGI 95

Query: 115 TPTSMMDIPVGQQ-------------SVIYNGEIYNQELTEVAELITSPEAIKNNLAVAF 161
              S+    +  +             ++  N  I   +L  + + I            + 
Sbjct: 96  DNFSINFFNLNNEKFSQSDSKNYHVINLKKNSSIILNQLNLIIDEIKLKNYKYEVACKSM 155

Query: 162 LTKIIYQWICLMYA----DGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWL 217
           L+  I   +  + +      +K     +  K+   L +   +  ++  ++     ++  L
Sbjct: 156 LSLFILNILRTIPSMSILQNEKKNLNLECAKIKNYLDSHYSENITLETLSNLSYMNKFSL 215

Query: 218 RRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGY 277
              F +  G +P  Y ++ R+  A SLL+    S+ ++   + F +S +FS+ FK +   
Sbjct: 216 VHAFTKQIGMSPISYLIEKRITEAKSLLETTNYSIKDIGSIVGFSNSSYFSQMFKKQTNL 275

Query: 278 APSAVLKNTDQHPT 291
           +P     N  ++P 
Sbjct: 276 SPKQYKVNMIKNPK 289


>UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae
           bacterium TAV2 RepID=C0ABA0_9BACT
          Length = 297

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 88/258 (34%), Gaps = 29/258 (11%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTP 116
              +         G G + +  GE   +    +  L+   +H +  E        + + P
Sbjct: 42  HWHDFCELAMVTGGRG-VHVLEGESFHVSTGDVFVLQGRQVHCFR-ERQGLALINVMYDP 99

Query: 117 TSMM------------DIPVGQQSVIYNGEIYNQEL----------TEVAELITSPEAIK 154
             +                   +    +   ++  L            + E I +     
Sbjct: 100 ERLPLPLGLLRRLPGYSALFMLEPTFRSTHRFSSRLRLARRELGSAEAIVERIENESKAA 159

Query: 155 NNLAVAFLTKIIYQWICLMYADGKKDPQRR-----QIEKLIATLHASLQQRWSVADMAAT 209
                A L  ++ + + L+     +   R      Q+ +L++ L     + W++  +A  
Sbjct: 160 QEGHEAVLLSLLVELMVLLSRHYAQSDTRESHALLQVGQLVSMLEQRFGEPWTLEQLAEQ 219

Query: 210 IPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSK 269
              S + L R+F + TG++P ++ +  R++ A  LL++    + E+A    F D   F +
Sbjct: 220 ARVSRSNLLRMFRQATGQSPIDFLIGLRIEAARRLLRRSDLGMTEIALECGFSDGNFFPR 279

Query: 270 AFKHKFGYAPSAVLKNTD 287
            F+   G  PS   +   
Sbjct: 280 QFRKTCGVTPSIYRRQMR 297


>UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens
           DSM 14469 RepID=C6LA91_9FIRM
          Length = 288

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 94/292 (32%), Gaps = 34/292 (11%)

Query: 18  IPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLK 77
           IP+    N   + +  + ++  +  + +                   +    G   + + 
Sbjct: 2   IPIYHENNTHGTAVFPLQVYSHHDKDGFF------SVSQHWHEELEWICAEHGVLNLTV- 54

Query: 78  NGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM----------------- 120
            G   TLH     F+   ++H     G       + F P  +                  
Sbjct: 55  RGRSFTLHPGEFCFINSGELHEIKSGGPSLHHA-IVFNPDILDFTLYDICQHSFIRPVTS 113

Query: 121 -DIPVGQQSVIYNGEIYNQEL---TEVAELITSPEAIKNNLAVAFLTKIIYQWIC----- 171
            ++       +++ E     L    E+  L  +  +  +      + +I+  +       
Sbjct: 114 GNLIFPTLPSVFSPEESQMILFHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFL 173

Query: 172 LMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
                 K+   + +++K+I  +H +     S+ D+A     S  +    F +  GK P  
Sbjct: 174 ENTISSKEKDSQNKLKKVIEYIHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIA 233

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVL 283
           +  + R+  A  +L      V +VA ++ F +  +F + F+      P+   
Sbjct: 234 FINEYRIQKACQILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYR 285


>UniRef50_C4Z413 AraC family transcriptional regulator, arabinose operon regulatory
           protein n=18 Tax=Clostridiales RepID=C4Z413_EUBE2
          Length = 276

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 94/246 (38%), Gaps = 11/246 (4%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKN-GEQITLHGNCIIFLKPMDIHSY-HCEGLVWEQY 110
             +P     +  +Y   GCG         +  +    I+  +P ++  Y +      E Y
Sbjct: 28  TYRPRGRVDFQIIYIAAGCGHFHFDTVDNETIVPAGNIVIFRPKELQKYEYYGEDKTEVY 87

Query: 111 WMEFTPTSMMDIP-------VGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163
           W+ FT + + +I          +   +     Y +    +   +   +     +    L 
Sbjct: 88  WIHFTGSDVKNILRKYGFPDNERIFPVGTSMEYERVFKRIIIELQRCQDNYEEMLTLLLR 147

Query: 164 KIIYQWICLMYADG--KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
            ++  +   +  +   K +    +++  +   + +  +  ++ + A +   S +W  R F
Sbjct: 148 HLLIIFQRELTREHVLKNEYLNHEMDTAVTYFNENYNRDINIEEYATSKGMSVSWFIRNF 207

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
            ++TG TP ++ +  R++ A  LL+    S+ E++  + + +  +FS+ F    G +P  
Sbjct: 208 KKFTGSTPMQFIVALRVNNAQVLLEATNYSINEISKIVGYDNQLYFSRLFHKLKGDSPRD 267

Query: 282 VLKNTD 287
             K   
Sbjct: 268 YRKTRK 273


>UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
           29174 RepID=A5ZUG1_9FIRM
          Length = 277

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 94/268 (35%), Gaps = 11/268 (4%)

Query: 29  SGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNC 88
           +  S  ++    +  HY   WP     P         Y  +G G+ L++N +  ++  + 
Sbjct: 12  TPFSTEAVLVNASSSHYEEDWP---SIPHTHAFTELFYVSEGSGEFLIEN-QHFSIKKDD 67

Query: 89  IIFLKPMDIHS-YHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQEL---TEVA 144
           +I + P   H+           Y +     S       +  + +  + +   L     + 
Sbjct: 68  LIIVNPHIQHTEISLSASPLSYYTVGVDGISFSFHDQKEFQIFHYHQKHADLLFYFHSLF 127

Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRW 201
           + +         +    L  +I Q      +D +  P     ++   +   L +      
Sbjct: 128 QELDEKNDGYEEICKHTLAILISQLRRFAVSDFQLFPSFHPSKECALVKRYLDSHYSDDI 187

Query: 202 SVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNF 261
           ++  +A+    ++ +L   F RY G +P  Y    R+++  +LL+   + + ++A    F
Sbjct: 188 NLEQLASLSHLNKYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAHLAGF 247

Query: 262 FDSFHFSKAFKHKFGYAPSAVLKNTDQH 289
               + +++F+   G       ++    
Sbjct: 248 SSQSYLAQSFRKYCGMTAGEYRRSKKNQ 275


>UniRef50_C4ZBP1 Two-component response regulator n=2 Tax=Clostridiales
           RepID=C4ZBP1_EUBR3
          Length = 297

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 93/245 (37%), Gaps = 11/245 (4%)

Query: 53  KKKPLIANSWVAVYTVQGCGKILLKNGE-QITLHGNCIIFLKPMDIHSYHC-EGLVWEQY 110
             +P     +  +Y   G       N E +  +    I+  +P ++  Y        + Y
Sbjct: 52  TYRPRGRLDYQIIYISSGLVHFHFDNPENETIIPAGHIVLFRPKELQKYEFYGKDKTQIY 111

Query: 111 WMEFTPTSMMDIPVGQQSV-------IYNGEIYNQELTEVAELITSPEAIKNNLAVAFLT 163
           W+ FT + + +               +     Y Q    +   +   +     + +  L 
Sbjct: 112 WLHFTGSDVKNTLRKYGFTDNKRVFNVGTSLEYEQVFKRIITELQRCQDNYEEMLMLLLR 171

Query: 164 KIIYQWICLMYADG--KKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLF 221
            ++  +   +  +   + +    Q++  I   + +  +  +V + A++I  S +W  R F
Sbjct: 172 HLLIIFNRKITTEHVIRNEFLDSQMDTAITYFNTNYNRSINVEEYASSIGMSISWFIRSF 231

Query: 222 LRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSA 281
            +YTG TP ++    R+  A  LL+    S+ E+A  + + +  +FS+ F  + G +PS 
Sbjct: 232 RKYTGNTPVQFLTALRMTNAQVLLETTSYSINEIAGIVGYNNPLYFSRLFHKQKGCSPSE 291

Query: 282 VLKNT 286
                
Sbjct: 292 YRARN 296


>UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula
           baltica RepID=Q7UYE3_RHOBA
          Length = 290

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 87/300 (29%), Gaps = 38/300 (12%)

Query: 15  PYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKI 74
           P  IP L  E+        I +             P++            V    G G +
Sbjct: 2   PEMIPTLKKEDWFHPDGFPIVV---------ERRDPQEPFGLHCHEFAEIVIITGGKG-V 51

Query: 75  LLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM------------DI 122
            +   +   L       +     H Y           + F P  +               
Sbjct: 52  HITGEDSYELVTGDTFVIGGDRPHDYLNMDQ-LSLINILFDPLELPLSIGDLQSLSGYHA 110

Query: 123 PVGQQSVIYNGEIYNQELT----EVAELITSPEAIKNNLAVA-----------FLTKIIY 167
               +        +   L     E+ E +   E++   L               L  + +
Sbjct: 111 LFTLEPAWRKRHQFTSRLQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTF 170

Query: 168 QWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGK 227
              C +     +  +  +I + I+ +     +  S+ D+      S     R F      
Sbjct: 171 LSRCYIRTRNPESKKLLRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMET 230

Query: 228 TPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           +P +Y +  R+  A  LL+    S+ ++A  + F DS +FS+ F+   G +P    K   
Sbjct: 231 SPIKYLIQVRIQEASRLLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290


>UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus
           RepID=B5YFJ6_DICT6
          Length = 287

 Score =  178 bits (451), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 30/255 (11%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHS---------------- 99
           P   N +  +Y  +G GK  + +G +  L+    +F+    IHS                
Sbjct: 38  PHWHNEFEILYMERGIGKFYV-DGYEYKLNEGEYLFVNSGSIHSGLEMIKRSIGYAIVFD 96

Query: 100 ----YHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKN 155
               Y  E    +  +  F P       +       N E    ++  + E+         
Sbjct: 97  LRLLYSEEPDYCKHEY--FLPLINKRYHIPSN---LNDEHIRNDICRIIEVFKEKSYGYE 151

Query: 156 NLAVAFLTKIIYQ----WICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIP 211
               + L  I ++    +      DG+   +  +I+ ++  ++ +  +  S+ +++  + 
Sbjct: 152 LYIKSLLFDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVD 211

Query: 212 CSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAF 271
            S+ +L RLF      +P EY    R+D A+ LL     SV E+A    F +  +F K F
Sbjct: 212 MSKFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVF 271

Query: 272 KHKFGYAPSAVLKNT 286
           K      P    K  
Sbjct: 272 KKYMHTTPLKFRKQN 286


>UniRef50_C6J3G2 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786
           str. D14 RepID=C6J3G2_9BACL
          Length = 289

 Score =  178 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 98/278 (35%), Gaps = 18/278 (6%)

Query: 16  YNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKIL 75
            NI  + +    S  + L S+ ++         W R  ++P     +  ++T++G G+  
Sbjct: 9   ENIRYVFSSIERSLPLFLESIGYS--------AWERVFQRPEGYPYYHWLHTLEGEGRFE 60

Query: 76  LKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIY---- 131
           L  GE ++L     + LKP   HSY+     W   ++ F   S   I             
Sbjct: 61  LL-GEAVSLTKGKGVLLKPFTPHSYYPVSDRWSTIYITFGGDSAASIMESLNMNTSTFYE 119

Query: 132 --NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQW--ICLMYADGKKDPQRRQIE 187
               + +     ++   I   E+         L   + Q     ++           +++
Sbjct: 120 EGEEQSFGALFNDLFRRIDQAESHSEIEVSTDLYYFLMQLRKFGMLNNRPSLSQYYNKLQ 179

Query: 188 KLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALS-LLK 246
            ++  +   L     + ++A         L  LF +    +P  Y +  RL  A   +L+
Sbjct: 180 PIVHWMEQHLADNIGLQEIAEHAHIGMNALHELFQQAFDMSPYSYLIQLRLREAKKIMLQ 239

Query: 247 QQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK 284
               ++ EVA+   F D  HF   F+ K G  P    +
Sbjct: 240 HPNRALREVAEQTGFNDVSHFVATFRKKEGITPGKYRE 277


>UniRef50_A5Z7W7 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
           ATCC 27560 RepID=A5Z7W7_9FIRM
          Length = 334

 Score =  177 bits (450), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 97/236 (41%), Gaps = 10/236 (4%)

Query: 59  ANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTPT 117
              +  +Y   G     + + +Q ++    I+  KP ++  Y        + YW+ FT  
Sbjct: 81  RQDYQLLYVKHGTIYYYI-DKKQYSISAGGILIYKPSELLHYEFFLKDAPDIYWVHFTGD 139

Query: 118 SMMDIPVGQQSVIYN------GEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC 171
           ++ +I         +         Y+    ++   + + +    +++   + +++Y    
Sbjct: 140 NVDNILGELNLSTKHAFMGTICPEYDTIFDKIISELLNRKLHFMDISSILMLELLYTISR 199

Query: 172 LMYADGKKDPQRRQI-EKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK 230
            +        +   I EK++   + +   + S+  +A  +  S +WL + F ++ G +PK
Sbjct: 200 DICTITYISSKNDLILEKVLEIFNTNYPNKISITSIAKELNYSSSWLSKTFTKHFGLSPK 259

Query: 231 EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNT 286
            Y  + R++ A S+L     S+ +VA+   F D  +FS+ F +  G  PS   +  
Sbjct: 260 AYLTNLRIEKAKSMLLST-MSIRQVAEQTGFPDQMYFSRVFTNAEGITPSQYRQKH 314


>UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales
           RepID=B6VVW1_9BACE
          Length = 288

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 91/279 (32%), Gaps = 28/279 (10%)

Query: 36  LWHTYADEHYRVIWPRDKKKP------LIANSWVAVYTVQGCGKILLKNGEQITLHGNCI 89
            +     E++   +   + +P         ++W   Y V G G   +            +
Sbjct: 7   PYELPEAENHSFFFIDQRTEPSLEAKLHRHDAWELYYVVHGQGN-RMAGDTLQHFEAGDV 65

Query: 90  IFLKPMDIHSYH-----CEGLVW-EQYWMEFTPTSMMDIP-------------VGQQSVI 130
             + P  +H +       +         + F  + +                 +     +
Sbjct: 66  ALIPPSMLHRWEYAADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDAL 125

Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR--RQIEK 188
             G    + + +    +   + +    A+  L  +I+     ++A      ++  R++++
Sbjct: 126 KFGPESVRVIRKTLSEMNGMDELGRLSAMFRLLPVIFTSSDHIFAGKPMRIEKNVRRMQQ 185

Query: 189 LIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQ 248
           + A +        ++ D+AA +  + +     F R  G T  ++    RL+ A  LLK  
Sbjct: 186 ICAYVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHS 245

Query: 249 GNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
              V E+   + F D  HF + F    G  PS   K   
Sbjct: 246 QKGVSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRKQFK 284


>UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales
           RepID=C5RE92_CLOCL
          Length = 286

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 91/269 (33%), Gaps = 20/269 (7%)

Query: 38  HTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDI 97
              A  H     PR          +  +  + G   + L NG ++ L    + F+    +
Sbjct: 17  FPIAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTL-NGNELKLKTGDLAFIHAGIL 75

Query: 98  HSYHCEGLVWEQYWMEFTPTSMMDIPVGQQS--VIYNGEIYNQEL-----------TEVA 144
           H       V+E    +      ++    +Q   +I+N ++ N  L             + 
Sbjct: 76  HGGTPIDCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNLELQTVCNYLF 135

Query: 145 ELITSPEAIKNNLAVAFLTKIIYQWICLMY------ADGKKDPQRRQIEKLIATLHASLQ 198
           E +   +     +    L  ++   +          A  K   +  Q + +++ +     
Sbjct: 136 ESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQQYP 195

Query: 199 QRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADT 258
              ++ D++     +  +  R F   T ++P +Y    R++ +   L     S+ E+A  
Sbjct: 196 DPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEIALN 255

Query: 259 LNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
             F D  +F K FK   G  P   LK+  
Sbjct: 256 CGFNDISYFIKTFKKYKGVTPKQYLKDYH 284


>UniRef50_C2H081 AraC family transcriptional regulator n=31 Tax=Bacilli
           RepID=C2H081_ENTFA
          Length = 290

 Score =  177 bits (449), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 105/276 (38%), Gaps = 13/276 (4%)

Query: 21  LINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGE 80
                +  S  S    ++      ++   P   ++     S++  +T+ G G++  +   
Sbjct: 15  SKRHILTPSSKSRTLFYYIQEIGQFKASRPYYTER-AHLPSYLIKFTLNGTGELRYRY-H 72

Query: 81  QITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEF----TPTSMMDI-----PVGQQSVI 130
             +L    + F+   D   Y       WE  W+ F    +     +      PV   + +
Sbjct: 73  TYSLQRGDLFFIDCRDYQYYQATSEEPWEMDWIHFEGGNSGAFFQEFMKNGSPVFSTNQL 132

Query: 131 YNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADG-KKDPQRRQIEKL 189
                 +  + ++ +L     A  +  +   + +++ + +   Y      +     + ++
Sbjct: 133 PEDNPIHLIIQQLLQLQDLQHAQTDYQSSVLIHQLLNELLLQKYRQDFTYETIPSLVLEM 192

Query: 190 IATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQG 249
            A +    ++  S+ D+A     ++  L + F +Y G  P +Y +  ++  +  LL+   
Sbjct: 193 KAYIDQHFKETISLEDLAQLFHLNKYQLNKEFSKYIGLPPIKYQISKKISYSKDLLRYSN 252

Query: 250 NSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKN 285
            +V E+A  +   +  +FS+ FK + G  PS   K+
Sbjct: 253 QTVKEIAVDVGLENYAYFSRLFKKRTGLTPSQYRKS 288


>UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus
           RepID=B9IXY7_BACCQ
          Length = 286

 Score =  177 bits (449), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 97/248 (39%), Gaps = 11/248 (4%)

Query: 57  LIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCE-GLVWEQYWMEFT 115
              +    +Y  +G G   +   E+I +  + +I + P   H+   +     E   +   
Sbjct: 37  HAHHFTELLYITKGKGTF-IFYKEEIPVQEHNLIIVNPNIEHTEKSDTNHPLEYIALGIQ 95

Query: 116 PTSMMDIPVGQQSVIYNGEIYNQ----ELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC 171
             S   I       I+N +   +     L ++ E + + +   + +    L  ++ + + 
Sbjct: 96  GLSFSSIENPSPVTIHNYKQDQKNFLFYLQQLVEEVENHQEDYDLIIQNILEILLLKMMR 155

Query: 172 LMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
               + +K       + IE +   +     +  S+  +A+    ++ +L   F ++ G +
Sbjct: 156 KKSFNVEKTSTQKINKDIEFIKNYIKQHFHENISLDTLASISHINKYYLSHSFRKFVGVS 215

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLK--NT 286
           P EY +  R+  +  LL+    S+  ++    F     F+++FK +   +PS      N+
Sbjct: 216 PIEYLIQTRIRESKILLETTNYSISNISTITGFSSQSFFAQSFKRETNLSPSQYRNAINS 275

Query: 287 DQHPTDAS 294
            ++  D+S
Sbjct: 276 SKNKLDSS 283


>UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase n=1
           Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T9_EUBR3
          Length = 276

 Score =  177 bits (449), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 89/239 (37%), Gaps = 8/239 (3%)

Query: 56  PLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGL-VWEQYWMEF 114
           P   +     +   G G++L++N E + +  N ++ +     H+   +     + Y +  
Sbjct: 36  PHSHHFTEIFFIKDGTGRMLIEN-ESLPVSSNSLVVIGAQVTHTEFSDPENPLDYYVLGV 94

Query: 115 TPTSMMDIPVGQQSVIY---NGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWIC 171
               +      +   +    N     Q    +   + + +     +   +L  +I  +  
Sbjct: 95  EGLKLNTDKEPEYIHVPASANSPFIRQCFENILREMHNKQDRYAEICQHYLDILILYFCR 154

Query: 172 LMYADGK---KDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKT 228
             +   +        R+  K+   +  + Q   S+  +A     S+ +L   F    GK+
Sbjct: 155 KDHVSYEVVDAQNSSRECHKVKRFIEHNYQSMISLDSLAENCSLSKYYLSHRFAELYGKS 214

Query: 229 PKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
           P  Y  + RL  A  LL    +S+ E+A  + F  + +FS++F+  F  +P    K+  
Sbjct: 215 PIAYLNEVRLASARDLLLTTNHSIEEIAGCIGFSSTSYFSQSFQKNFHESPQQFRKSHR 273


>UniRef50_P07642 Arabinose operon regulatory protein n=160 Tax=Proteobacteria
           RepID=ARAC_ERWCH
          Length = 310

 Score =  176 bits (448), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 90/257 (35%), Gaps = 13/257 (5%)

Query: 51  RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYH--CEGLVWE 108
               +P     ++   T++G G+I     E    +   ++   P   H Y        W 
Sbjct: 39  FFIDRPDGMKGYIINLTMKGQGQI-FDGDETFFCNPGDLLLFPPKSTHFYGRSPSSDCWY 97

Query: 109 QYWMEFTP----TSMMDIPVGQQSVIYNGEIYNQELTEVAEL---ITSPEAIKNNLAVAF 161
             W+ F P       ++       +       NQ L E   L   I   +      +   
Sbjct: 98  HRWVYFRPRAYWADWLEWHTKSSGIGRMSLPNNQLLLEFDRLFANIEQTQRSGRRFSEEL 157

Query: 162 LTKIIYQWICLMYADGKKDPQ---RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLR 218
              ++ + +     +  + PQ     ++ +    + ++L     + ++A  +  S + L 
Sbjct: 158 GMNLLERLLLRAMEEDPQSPQKIMDPRVIEACQFITSNLAGELRIDEVARHVCLSPSRLA 217

Query: 219 RLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYA 278
            LF    G     +  D R+  A  LL+    S+  +   + + D  +FS+ F+ + G +
Sbjct: 218 HLFREQVGINILRWREDQRVIRAKLLLQTTQESIANIGRVVGYDDQLYFSRVFRKRVGVS 277

Query: 279 PSAVLKNTDQHPTDASP 295
           PS   + + +    A+ 
Sbjct: 278 PSDFRRRSSEINYPAAK 294


>UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp.
           oral taxon 786 str. D14 RepID=C6IZN9_9BACL
          Length = 301

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 91/271 (33%), Gaps = 29/271 (10%)

Query: 45  YRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEG 104
           YR             +     Y ++G   +   + +   +     +F+   DIH+ H  G
Sbjct: 27  YRYGPGEHVIDCHWHDEAEFFYCLEGE-TLFQVDTDYFPVGAGEAVFIDGGDIHAAHAHG 85

Query: 105 L-VWEQYWMEFTPTSMMD-----------IPVGQQSVIYNGEIYNQ------ELTEVAEL 146
                 + + F    +             +P+ ++   +   I  +       L  +  L
Sbjct: 86  DQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRETAADLSLLEHIVAL 145

Query: 147 ITS---PEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQR-------RQIEKLIATLHAS 196
           + S               L  ++ +      A  +             +++ +I  +  +
Sbjct: 146 MRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKIDRLKTVIQHIQHN 205

Query: 197 LQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVA 256
                 +A++AA IP SE    R F   T +TP +Y    R+  A  LL++    + ++A
Sbjct: 206 YSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAELLREPERKISDIA 265

Query: 257 DTLNFFDSFHFSKAFKHKFGYAPSAVLKNTD 287
             + F +  +F + F+     +PS   K   
Sbjct: 266 LEVGFDNISYFIRVFRKAMNCSPSEFRKRLQ 296


>UniRef50_UPI0001C37EF8 AraC family transcriptional regulator n=1 Tax=Ruminococcus
           flavefaciens FD-1 RepID=UPI0001C37EF8
          Length = 287

 Score =  176 bits (447), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 94/237 (39%), Gaps = 9/237 (3%)

Query: 60  NSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHC-EGLVWEQYWMEFTP-- 116
           +S++    V+G G++ + +     L     +F+           E   WE  W+ F    
Sbjct: 52  DSFLIAAVVRGRGELAVGDERS-PLVQGDCLFIDCQQSFICKSSESEPWEIIWVYFNGCT 110

Query: 117 -TSMMDIPVGQQSVIYNGEIYNQE---LTEVAELITSPEAIKNNLAVAFLTKIIYQWICL 172
                ++       ++    +++    +TE+A L        + L    +  I+   +  
Sbjct: 111 SKQYHELFSANTGSVFRPVSFDKVVTAITEIASLCGEETRNSDILCSKQIMDILTIALTS 170

Query: 173 MYADGKKDPQ-RRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE 231
             A+ + D   RR++  + + +     +  S+  +++    S+ +L R + +  G+T  +
Sbjct: 171 DAAEEQYDSGLRRKLAMVNSYIDDHFSEDLSLERLSSEFYISKFYLTREYKKIYGRTIFQ 230

Query: 232 YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQ 288
           + ++ R++    LL+    S+ E+A    F D  +F++ FK        +  K   +
Sbjct: 231 HIINVRINYGKKLLRFSDRSIDEIAHMCGFNDQSYFARQFKKAENLTCFSYRKKWRE 287


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.315    0.161    0.487 

Lambda     K      H
   0.267   0.0492    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,111,231,023
Number of Sequences: 3077464
Number of extensions: 121391793
Number of successful extensions: 377430
Number of sequences better than 1.0e-01: 250
Number of HSP's better than  0.1 without gapping: 18388
Number of HSP's successfully gapped in prelim test: 1830
Number of HSP's that attempted gapping in prelim test: 320025
Number of HSP's gapped (non-prelim): 26932
length of query: 297
length of database: 1,040,396,356
effective HSP length: 128
effective length of query: 169
effective length of database: 646,480,964
effective search space: 109255282916
effective search space used: 109255282916
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 93 (40.2 bits)
