18/01/2012 22:18:16 : INFO  : Run start: Wed Jan 18 22:18:14 GMT 2012
18/01/2012 22:18:25 : INFO  : Initialised job
18/01/2012 22:18:28 : INFO  : Renaming log file 'phyre2_20120118_221813.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/9e7a0531b882568e/phyre_20120118_221813.log'
18/01/2012 22:18:30 : INFO  : Initialised job:
Sequence
>batch____
MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN
SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM
DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD
PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL
ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN

18/01/2012 22:18:32 : INFO  : Checked sequence
18/01/2012 22:18:38 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 22:18:40 : INFO  : PSI-BLAST 3 iterations
18/01/2012 22:20:33 : INFO  : PSI-BLAST 5 iterations
18/01/2012 22:23:33 : INFO  : Finished PSI-BLAST
18/01/2012 22:23:38 : INFO  : Running Buildali to generate a3m file
19/01/2012 00:47:31 : INFO  : Converting to HMM
19/01/2012 00:47:40 : INFO  : Calibrating HMM
19/01/2012 00:48:03 : INFO  : Searching HMM database
19/01/2012 00:54:20 : INFO  : Finished buildali
19/01/2012 00:54:24 : INFO  : Predicting secondary structure
19/01/2012 00:54:40 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 00:54:43 : INFO  : Predicting Disordered regions
19/01/2012 00:54:51 : INFO  : Predicted Disorder (Disopred)
19/01/2012 00:54:55 : INFO  : Running memsat_svm check
19/01/2012 00:59:47 : INFO  : Globular protein
19/01/2012 00:59:49 : INFO  : Predicted Transmembrane (memsat_svm) ID '9e7a0531b882568e'
19/01/2012 00:59:52 : INFO  : Initialising fold library search
19/01/2012 00:59:58 : INFO  : Initialised search input
19/01/2012 01:00:02 : INFO  : Building Ensemble models
19/01/2012 01:00:08 : INFO  : Building hh.c3gbgA_.model.1.pdb
19/01/2012 01:00:36 : INFO  : Building hh.c3ibmB_.model.2.pdb
19/01/2012 01:00:57 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/9e7a0531b882568e/hh.c3ibmB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/9e7a0531b882568e/c3ibmB_.16.pdb
19/01/2012 01:01:06 : INFO  : Building hh.d1yfua1.model.3.pdb
19/01/2012 01:01:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/9e7a0531b882568e/hh.d1yfua1.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/9e7a0531b882568e/d1yfua1.25.pdb
19/01/2012 01:01:35 : INFO  : Building c3gbgA_.1.pdb
19/01/2012 01:02:02 : INFO  : Building c1d5yD_.2.pdb
19/01/2012 01:02:29 : INFO  : Building c1bl0A_.3.pdb
19/01/2012 01:02:55 : INFO  : Building c3oioA_.4.pdb
19/01/2012 01:03:21 : INFO  : Building c3oouA_.5.pdb
19/01/2012 01:03:45 : INFO  : Building c2k9sA_.6.pdb
19/01/2012 01:04:12 : INFO  : Building c3mn2B_.7.pdb
19/01/2012 01:04:38 : INFO  : Building c3mklB_.8.pdb
19/01/2012 01:05:02 : INFO  : Building c3lsgD_.9.pdb
19/01/2012 01:05:30 : INFO  : Building d1d5ya2.10.pdb
19/01/2012 01:05:57 : INFO  : Building d1bl0a2.11.pdb
19/01/2012 01:06:22 : INFO  : Building d2arca_.12.pdb
19/01/2012 01:06:47 : INFO  : Building d1bl0a1.13.pdb
19/01/2012 01:07:12 : INFO  : Building d1d5ya1.14.pdb
19/01/2012 01:07:37 : INFO  : Building c1zgwA_.15.pdb
19/01/2012 01:08:01 : INFO  : Building c3ibmB_.16.pdb
19/01/2012 01:08:27 : INFO  : Building c3kgzA_.17.pdb
19/01/2012 01:08:52 : INFO  : Building c3h7yA_.18.pdb
19/01/2012 01:09:17 : INFO  : Building c3jzvA_.19.pdb
19/01/2012 01:09:42 : INFO  : Building c2d40C_.20.pdb
19/01/2012 01:11:28 : INFO  : Finished HH model building
19/01/2012 01:11:31 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 01:12:42 : INFO  : html domain output complete ID '9e7a0531b882568e'
19/01/2012 01:30:50 : INFO  : Run end  : Thu Jan 19 01:30:48 GMT 2012
