5 c1nmlA_ Probab=100.00  E-value=0  Score=579.22  Aligned_columns=277  Identities=44%

Q ss_pred             CCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
Q ss_conf             68776778989999734411663330368755412379555587765366567887388466520130004665257871
Q batch____       175 PIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRA  254 (465)
Q Consensus       175 p~p~~~~~~~~kv~LG~~LF~D~~LS~~g~~SCaSCH~p~~g~~D~~~~~~g~~g~~g~rntPtl~n~~~~~~~fWdGr~  254 (465)
                      |.|..+|+++++|+|||+||||++||+||++||+|||.|..|++|++.+++|.+++.++||||||+|++++..+|||||+
T Consensus        19 ~~~~~~~~~~~~v~LG~~LF~D~~LS~~g~~SCasCH~~~~g~~dg~~~~~g~~~~~~~RntPsL~n~~~~~~~~wdG~~   98 (316)
T c1nmlA_          19 PVIDGNELTQAKVELGKMEFFEPRLSSSHLISCNTCHNVGLGGDDELPTSIGHGWQKGPRNSPTVFNAVFNAAQFWDGRA   98 (316)
T ss_dssp             CCCTTCCCCHHHHHHHHHHHTCGGGSTTSCCCHHHHSCTTTTTSCSSCBSCSTTCCSSCBCCCCCTTGGGCSSCCCEEEG
T ss_pred             CCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
T ss_conf             99988888999999988862231126799740203489355688876356589987478668631170002453247661


Q ss_pred             CCHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCC---CCHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
Q ss_conf             6888886202468032168899999999743666899999871877---8988999999999975188887345775597
Q batch____       255 ATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKTQFLEVYPQG---FSGENITDAIAEFEKTLITPDSPFDKWLRGD  331 (465)
Q Consensus       255 ~~L~~qa~~p~~~~~em~~~~~~~v~~~l~~~~~y~~~F~~a~~~~---~~~~~i~~Aiaay~~sl~~~~S~fD~~l~g~  331 (465)
                      .+|++|+..|+.++.||++ +...+..+|.++++|..+|..+|+..   ++.+++.+||++|+++|.+++||||+|++|+
T Consensus        99 ~~Le~qa~~p~~~~~Em~~-~~~~~~~~l~~~~~y~~~F~~a~~~~~~~~~~~~i~~ALaay~~sl~~~~s~fD~~~~g~  177 (316)
T c1nmlA_          99 ADLAEQAKGPVQAGVEMSS-TPDRVVATLKSMPEYIERFEDAFPGQENPVTFDNMAVAIEAYEATLITPEAPFDKYLRGD  177 (316)
T ss_dssp             GGHHHHCCCHHHHTTCCSS-CHHHHHHHHHTCHHHHHHHHHHSTTCSSCCCHHHHHHHHHHHHHHCCCCCCHHHHHHTTC
T ss_pred             CCHHHHHHCCCCCHHHHCC-CHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
T ss_conf             6799985212578333189-999999998529778999997328865578999999999999998287887036786797


Q ss_pred             CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
Q ss_conf             55799899989999974487546888877998311247547778877553366721258886565573898544711468
Q batch____       332 ENALTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTA  411 (465)
Q Consensus       332 ~~aLt~~e~rG~~LF~~~~Ca~CH~g~~~t~~~f~~~G~~~~~~~~~~~~~D~G~~~~t~~~~d~~~FktPsLRnV~~Ta  411 (465)
                      ..+||++|+||++||...+|++||+|++|||..||++|++          .+.||+.++++..|.++|||||||||+.|+
T Consensus       178 ~~alt~~e~rG~~lF~~~gC~~CH~g~~~t~~~~~~~g~~----------~~~Gr~~~t~~~~~~~~frtPsLRnv~~ta  247 (316)
T c1nmlA_         178 TSALNESEKEGLALFMDRGCTACHSGVNLGGQNYYPFGLV----------AKKGRFSVTETASDEYVFRASPLRNIELTA  247 (316)
T ss_dssp             GGGSCHHHHHHHHHHHHTTGGGTSCBTTTSCSCEESEEEE----------ECCTTEEEEECGGGCEEEECCCCTTGGGCC
T ss_pred             CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             4358999998999983167888788774788765667742----------224731135661127430688544600167


Q ss_pred             CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             832377727999999985315878898889999999999860788757655
Q batch____       412 PYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQ  462 (465)
Q Consensus       412 PY~HdG~~~tL~evv~~~~~~~~~~~Lt~~E~~dLvaFL~tLt~~~~p~~~  462 (465)
                      ||||||+++||+|||++|++.+.+.+||++|++||||||+||||+..+++.
T Consensus       248 PY~HdG~~~tL~evi~~~~~~~~~~~Ls~~e~~~LvaFL~tLt~~~~~~~~  298 (316)
T c1nmlA_         248 PYFHSGAVWSLEEAVAVMGTAQLGTELNNDEVKSIVAFLKTLTGNVPEVTY  298 (316)
T ss_dssp             SBTTTCCBCCHHHHHHHTCCTTTTCCCCHHHHHHHHHHHGGGCCCCCCCCC
T ss_pred             CCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             730167717999999985546878788899999999999850888775758


