19 c3js6A_ Probab=98.11   E-value=0.00033  Score=45.45  Aligned_columns=243  Identities=14%

Q ss_pred             CCCEEEEEEECCCCEEEEE--------------------------EEECCCEEEEEEEEEEECCCCCCC-----------
Q ss_conf             8735999980578248999--------------------------997099068856321211200001-----------
Q batch____         9 RPQEFAAVDLGSNSFHMVI--------------------------ARVVDGAMQIIGRLKQRVHLADGL-----------   51 (513)
Q Consensus         9 ~~~~~AvIDiGSNsirl~I--------------------------~~~~~~~~~~i~~~k~~vrLg~~~-----------   51 (513)
                      +...+.+||+|...+.+..                          .+.+...+..+...-+..-.|++.           
T Consensus         1 ~n~~i~gID~G~~~tK~~~~~~~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~vG~~a~~~~~~~~~~~   80 (321)
T c3js6A_           1 SNVYVXALDFGNGFVKGKINDEKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNTGKDTA   80 (321)
T ss_dssp             CCEEEEEEEECSSEEEEEETTEEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSCCEECC
T ss_pred             CCCEEEEEEECCCEEEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECHHHHHCCCCCCCCC
T ss_conf             98368999708731899988902674355414654433223345455432102333106827898257751154534444


Q ss_pred             -CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHCC-------------CCEEEEC
Q ss_conf             -32389798999999999999999997179956999971686437898999999999749-------------9639957
Q batch____        52 -GPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIP-------------YPIEIIS  117 (513)
Q Consensus        52 -~~~g~ls~e~i~r~~~~L~~f~~~~~~~~v~~i~~vATsA~R~A~N~~~fl~~i~~~tG-------------~~ievIs  117 (513)
                       ..+...++.....++.++.........-.+....+++.-.---.......++++.....             -++.|++
T Consensus        81 ~~~~k~~~~~~~~l~l~al~~~~~~~~~~~~~~~lv~gLP~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~i~I~~v~V~p  160 (321)
T c3js6A_          81 STNDRYDIKSFKDLVECSIGLLAREVPEEVVNVVIATGXPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVA  160 (321)
T ss_dssp             CSTTGGGSHHHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEE
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEEEEEEEE
T ss_conf             45673367547999999999998623787630489972895787688999999850481599987878999999999995


Q ss_pred             HHHHHHHHHH---HHHHHCCCCCCEEEEEECCCCEEEEEECCCEEE--EEEEECCCHHHHHHHHHCC----------CCC
Q ss_conf             6899999999---998508775868999946882488981598078--9886158207788875136----------899
Q batch____       118 GNEEARLIFM---GVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSFAQLYFPG----------GVI  182 (513)
Q Consensus       118 g~eEa~l~y~---gv~~~~~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~f~~~----------~~~  182 (513)
                      ..-=|.+.|.   ..........+.+|+|||||.|.++.++++.+.  .+.++++|...+.+.....          ...
T Consensus       161 Eg~ga~~~~~~~~~~~~~~~~~~~v~viDiG~gTtD~~~~~~~~~~~~~~~~~~~G~~~~~~~I~~~i~~~~~~~~~id~  240 (321)
T c3js6A_         161 QPXGTLLDLNXENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNXKRVEEESFVINKGTIDFYKRIASHVSTPRMIEKGLEF  240 (321)
T ss_dssp             HHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTCCHHHHHSCCCC
T ss_pred             CCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCEECCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf             75156653013444542223458579997589807999972850040000442012899999999997542044432441


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHH-HHCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCC-------HHHHHHHHHHHHC
Q ss_conf             9889999999999998778876-2005987899975108999999832455797017-------9999999999983
Q batch____       183 NKENFQRARMAAAQKLETLTWQ-FRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIIT-------PERLEKLVKEVLR  251 (513)
Q Consensus       183 ~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~vg~gGt~~~la~~~~~~~~~~~~i~-------~~~l~~~~~~l~~  251 (513)
                      +..-.+.+..++...+..+... ........++.+||....+...+.+.-.....+.       ...+.++.+.+..
T Consensus       241 ~~~i~~~~~~~~~~i~~~i~~~~~~~~~~~~vi~~GGGa~~l~~~l~~~~~~~~~~~~n~~~aNa~G~~~~g~~~~~  317 (321)
T c3js6A_         241 KDEFYKEQDSLIEEVXSNFEITVGNINSIDRIIVTGGGANIHFDSLSHYYSDVFEKADDSQFSNVRGYEKLGELLKN  317 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCTTSCSEEEEESTTHHHHHHHHHHHSSSCEECCSSGGGHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf             78999999999999999999863030014559997224899999999754971898498289999999999999776