465 c3fluD_ Probab=25.88   E-value=39  Score=13.24  Aligned_columns=164  Identities=14%

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             98999999999996699899997388542100110000000000112345555445665369899999999999971899
Q batch____       127 SIDEALDDYARHQELGFKAIRVQCGIPGMKTTYGMSKGKGLAYEPATKGQWPEEQLWSTEKYLDFMPKLFDAVRNKFGFN  206 (404)
Q Consensus       127 ~~~~~~~~~~~~~~~G~~~~Kik~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~ir~~~G~~  206 (404)
                      +.+...+.++.+++.|.+.+-+ .|..+.-...                            ..++-.+.++.+++.++.+
T Consensus        22 D~~~~~~~~~~l~~~Gv~gi~~-~G~tGE~~~L----------------------------s~~Er~~i~~~~~~~~~~~   72 (293)
T c3fluD_          22 HYEQLRDLIDWHIENGTDGIVA-VGTTGESATL----------------------------SVEEHTAVIEAVVKHVAKR   72 (293)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEE-SSTTTTGGGS----------------------------CHHHHHHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHHCCCCEEEE-CCCCCCHHHC----------------------------CHHHHHHHHHHHHHHCCCC
T ss_conf             8899999999999779989998-7723570217----------------------------9999999999999960899


Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHCCEEEEE-------CCCCCCCHHHHHHHHHHCCCEEE------ECCCCCCHHHHH
Q ss_conf             77999469998899999999984436404384-------34881568999999986399099------458758999999
Q batch____       207 EHLLHDMHHRLTPIEAARFGKSIEDYRMFWME-------DPTPAENQECFRLIRQHTVTPIA------VGEVFNSIWDCK  273 (404)
Q Consensus       207 ~~l~vDan~~w~~~~A~~~~~~l~~~~l~~iE-------eP~~~~d~~~~~~l~~~~~ipIa------~gE~~~~~~~~~  273 (404)
                      +.+++-.. +.+.+++++.++..++.|..-+-       -|-..+-.+-++++.+.+++||.      ..-...+...+.
T Consensus        73 ~~vi~gv~-~~~~~~~i~~a~~a~~~Gad~v~~~pP~~~~~s~~~i~~~~~~ia~~~~~pi~~Yn~P~~tg~~~s~~~~~  151 (293)
T c3fluD_          73 VPVIAGTG-ANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTIL  151 (293)
T ss_dssp             SCEEEECC-CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCCSCEEEEECHHHHSSCCCHHHHH
T ss_pred             CEEEEECC-CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHH
T ss_conf             73999658-89999999999999854998999938878899988999999999975499899996753336775989999


Q ss_pred             HHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
Q ss_conf             99966997499833231384799999999999709939971788762899999
Q batch____       274 QLIEEQLIDYIRTTLTHAGGITGMRRIADFASLYQVRTGSHGPSDLSPVCMAA  326 (404)
Q Consensus       274 ~~i~~~~~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~H~~~~~s~i~~aa  326 (404)
                      ++  ...-.++-+|-+-.-    ..++.++.+..+-++.+.++....-+...+
T Consensus       152 ~L--~~~~~v~giK~s~~d----~~~~~~l~~~~~~~~~v~~G~d~~~~~~l~  198 (293)
T c3fluD_         152 RL--AEIPNIVGVKEASGN----IGSNIELINRAPEGFVVLSGDDHTALPFML  198 (293)
T ss_dssp             HH--TTSTTEEEEEECSCC----HHHHHHHHHHSCTTCEEEECCGGGHHHHHH
T ss_pred             HH--HCCCCEEEEECCCCC----HHHHHHHHHHCCCCEEEEECCHHHHHHHHH
T ss_conf             98--347988899638899----899999998639987999487799999998