BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (317 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P30979 Uncharacterized HTH-type transcriptional regulat... 651 0.0 UniRef50_Q32IV1 Putative transcriptional regulator LYSR-type n=1... 511 e-143 UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=E... 461 e-128 UniRef50_D0YJS8 Transcriptional regulator, LysR family n=2 Tax=K... 333 4e-90 UniRef50_UPI000190F23D putative DNA-binding transcriptional regu... 243 5e-63 UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulat... 136 1e-30 UniRef50_UPI0001826721 hypothetical protein EcanA3_12211 n=1 Tax... 134 4e-30 UniRef50_P77746 Uncharacterized HTH-type transcriptional regulat... 133 9e-30 UniRef50_C5BHM7 Transcriptional regulator, LysR family n=2 Tax=E... 127 5e-28 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 119 2e-25 UniRef50_B5XZT9 Transcriptional regulator, LysR family n=5 Tax=K... 117 5e-25 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 115 3e-24 UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=S... 115 3e-24 UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=V... 108 2e-22 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 108 2e-22 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 108 2e-22 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 107 6e-22 UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=... 106 1e-21 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 103 8e-21 UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobact... 103 8e-21 UniRef50_B7MRR6 Putative uncharacterized protein n=5 Tax=Escheri... 103 9e-21 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 102 1e-20 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 101 3e-20 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 101 4e-20 UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=S... 101 4e-20 UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobac... 100 7e-20 UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomona... 100 9e-20 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 99 1e-19 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 99 2e-19 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 99 2e-19 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 99 2e-19 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 99 2e-19 UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=G... 99 2e-19 UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=B... 99 2e-19 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 98 3e-19 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 98 4e-19 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 97 5e-19 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 97 5e-19 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 97 7e-19 UniRef50_P46924 Probable HTH-type transcriptional regulator leuO... 97 7e-19 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 97 9e-19 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 96 1e-18 UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n... 96 1e-18 UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=G... 96 1e-18 UniRef50_Q47ZN8 Transcriptional regulator, LysR family n=1 Tax=C... 96 2e-18 UniRef50_P52679 PCP degradation transcriptional activation prote... 95 3e-18 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 94 6e-18 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 94 6e-18 UniRef50_A6CX36 Transcriptional regulator n=1 Tax=Vibrio shiloni... 94 8e-18 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 94 8e-18 UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=G... 93 1e-17 UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=S... 92 2e-17 UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter ... 92 2e-17 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 92 2e-17 UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=B... 92 3e-17 UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 91 6e-17 UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=... 91 6e-17 UniRef50_C5AL93 Transcriptional regulator, LysR family protein n... 91 7e-17 UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteob... 91 8e-17 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 90 1e-16 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 90 1e-16 UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=M... 90 1e-16 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 90 1e-16 UniRef50_A5KW47 Transcriptional regulator, LysR family protein n... 89 1e-16 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 89 2e-16 UniRef50_B4S2V4 Transcriptional regulator, LysR family protein n... 89 2e-16 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 89 2e-16 UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=V... 89 3e-16 UniRef50_A9BUT0 Transcriptional regulator, LysR family n=5 Tax=C... 89 3e-16 UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=... 89 3e-16 UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae ... 89 3e-16 UniRef50_Q085G5 Transcriptional regulator, LysR family n=1 Tax=S... 88 3e-16 UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=M... 88 4e-16 UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=A... 88 5e-16 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 87 8e-16 UniRef50_B6AU51 Transcriptional regulator, LysR family, putative... 87 8e-16 UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=A... 87 9e-16 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 87 1e-15 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 87 1e-15 UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=D... 87 1e-15 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 86 1e-15 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 86 1e-15 UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=... 86 2e-15 UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=A... 86 2e-15 UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibri... 86 2e-15 UniRef50_A4Z170 Putative transcriptional regulatory protein, Lys... 86 2e-15 UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=M... 86 2e-15 UniRef50_Q7MEL0 Transcriptional regulator n=18 Tax=Gammaproteoba... 86 2e-15 UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=V... 86 2e-15 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 86 3e-15 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 85 3e-15 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 85 3e-15 UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=... 84 5e-15 UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=... 84 5e-15 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 84 5e-15 UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=S... 84 5e-15 UniRef50_A9R140 Substrate-binding transcriptional regulator, Lys... 84 6e-15 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 84 7e-15 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 84 8e-15 UniRef50_Q2CK92 Transcriptional regulator, LysR family protein n... 84 9e-15 UniRef50_C4LDS5 Transcriptional regulator, LysR family n=1 Tax=T... 83 1e-14 UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=M... 83 1e-14 UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=G... 82 2e-14 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 82 2e-14 UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Bu... 82 2e-14 UniRef50_C1M9D8 Predicted protein n=2 Tax=Citrobacter RepID=C1M9... 82 3e-14 UniRef50_B5ET44 Transcriptional regulator n=1 Tax=Vibrio fischer... 82 4e-14 UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=H... 81 4e-14 UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=c... 81 4e-14 UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding... 81 5e-14 UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales Re... 80 7e-14 UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=V... 80 8e-14 UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=P... 80 9e-14 UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=P... 80 9e-14 UniRef50_A1SEI3 Transcriptional regulator, LysR family n=1 Tax=N... 79 1e-13 UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=En... 79 1e-13 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 79 1e-13 UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=B... 79 2e-13 UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=V... 79 2e-13 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 79 2e-13 UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae R... 79 2e-13 UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=S... 79 2e-13 UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=P... 79 2e-13 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 79 3e-13 UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=G... 79 3e-13 UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n... 78 3e-13 UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory ... 78 4e-13 UniRef50_A6FDU8 Transcriptional regulator, LysR family protein n... 78 5e-13 UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=P... 77 6e-13 UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobac... 77 7e-13 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 77 8e-13 UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=B... 77 9e-13 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 77 1e-12 UniRef50_Q7VQS7 LysR-family transcriptional regulator n=2 Tax=Ca... 77 1e-12 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 77 1e-12 UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=S... 77 1e-12 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 76 1e-12 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 76 1e-12 UniRef50_A4BGW0 Probable transcription regulator protein n=1 Tax... 76 1e-12 UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=R... 76 1e-12 UniRef50_B5XW08 Transcriptional regulator, LysR family n=9 Tax=E... 76 1e-12 UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=A... 76 2e-12 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 76 2e-12 UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas na... 76 2e-12 UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gamma... 75 2e-12 UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=C... 75 2e-12 UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=A... 75 2e-12 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 75 3e-12 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 75 3e-12 UniRef50_A1A8Q4 Putative uncharacterized protein n=1 Tax=Escheri... 75 3e-12 UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=S... 75 3e-12 UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=B... 75 4e-12 UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=... 75 4e-12 UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=O... 75 4e-12 UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhiz... 75 4e-12 UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=V... 75 5e-12 UniRef50_B7VJR0 Transcriptional regulator n=7 Tax=Vibrionaceae R... 74 5e-12 UniRef50_P55733 HTH-type transcriptional regulator syrM 2 n=13 T... 74 5e-12 UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=S... 74 5e-12 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 74 6e-12 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 74 6e-12 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 74 8e-12 UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=c... 74 9e-12 UniRef50_A5L763 Transcriptional regulator n=1 Tax=Vibrionales ba... 74 9e-12 UniRef50_C6C4P6 Transcriptional regulator, LysR family n=4 Tax=P... 74 1e-11 UniRef50_Q1GIZ4 Transcriptional regulator, LysR family n=1 Tax=R... 73 1e-11 UniRef50_D0ZGN3 Transcriptional regulator n=2 Tax=Edwardsiella R... 73 1e-11 UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=S... 72 2e-11 UniRef50_Q4KCL9 Transcriptional regulator, LysR family n=15 Tax=... 72 2e-11 UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 72 2e-11 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 72 2e-11 UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=G... 72 2e-11 UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=L... 72 3e-11 UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Ta... 72 3e-11 UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1... 72 4e-11 UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n... 71 4e-11 UniRef50_B9QU66 LysR substrate binding domain protein n=1 Tax=La... 71 4e-11 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 71 5e-11 UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding... 71 5e-11 UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=... 71 5e-11 UniRef50_Q0VH46 Putative LysR type regulator n=3 Tax=Proteobacte... 71 6e-11 UniRef50_Q16B23 Transcriptional regulator, LysR family, putative... 71 6e-11 UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=So... 70 7e-11 UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=B... 70 7e-11 UniRef50_Q1T7B6 Putative LysR-type transcriptional activator n=1... 70 7e-11 UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=H... 70 8e-11 UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=... 70 9e-11 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 70 9e-11 UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=B... 70 9e-11 UniRef50_A1R1P0 Putative transcriptional regulator, LysR family ... 70 1e-10 UniRef50_D0J6E9 Transcriptional regulator, LysR family n=2 Tax=C... 70 1e-10 UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n... 70 1e-10 UniRef50_C9D2D7 Transcriptional regulator, LysR family n=1 Tax=S... 70 1e-10 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 70 1e-10 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 70 1e-10 UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter ... 70 1e-10 UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 ... 69 1e-10 UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=... 69 2e-10 UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=P... 69 2e-10 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 69 2e-10 UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorh... 69 2e-10 UniRef50_C3KNK2 Transcriptional regulator, LysR family n=1 Tax=R... 69 2e-10 UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=S... 69 2e-10 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 69 2e-10 UniRef50_Q5DZ29 Transcriptional regulator, LysR family n=2 Tax=V... 69 2e-10 UniRef50_Q1YUH5 Nodulation protein d1 n=1 Tax=gamma proteobacter... 69 2e-10 UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n... 69 2e-10 UniRef50_Q2NRV1 Putative transcriptional regulator n=1 Tax=Sodal... 69 3e-10 UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=H... 69 3e-10 UniRef50_B7RWY7 LysR substrate binding domain protein n=2 Tax=un... 69 3e-10 UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=V... 69 3e-10 UniRef50_A6CVD4 Transcriptional regulator, LysR family protein n... 68 3e-10 UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=B... 68 5e-10 UniRef50_O67145 Transcriptional regulator (LysR family) n=2 Tax=... 68 5e-10 UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=P... 67 6e-10 UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=R... 67 6e-10 UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogo... 67 6e-10 UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative... 67 6e-10 UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=B... 67 7e-10 UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax... 67 7e-10 UniRef50_C9NTB9 LysR-like transcriptional regulator n=5 Tax=Vibr... 67 8e-10 UniRef50_Q5E1I8 Transcriptional regulator, LysR family n=3 Tax=V... 67 8e-10 UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhod... 67 8e-10 UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=A... 67 9e-10 UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=P... 67 9e-10 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 67 9e-10 UniRef50_Q7D3Y4 Transcriptional regulator, LysR family n=3 Tax=P... 67 9e-10 UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vi... 67 1e-09 UniRef50_Q1Z9L0 Putative transcriptional regulator, LysR family ... 66 2e-09 UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas ma... 66 2e-09 UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n... 66 2e-09 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 66 2e-09 UniRef50_A6EZR5 Transcriptional regulator, LysR family protein n... 66 2e-09 UniRef50_B0SY67 Transcriptional regulator, LysR family n=1 Tax=C... 66 2e-09 UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia r... 65 2e-09 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 65 2e-09 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 65 2e-09 UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=A... 65 3e-09 UniRef50_Q89SA1 Transcriptional regulatory protein n=1 Tax=Brady... 65 3e-09 UniRef50_Q2NZJ9 Transcriptional regulator n=9 Tax=Xanthomonas Re... 65 3e-09 UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Kl... 65 3e-09 UniRef50_Q6LMQ1 Hypothetical LysR-like regular protein n=2 Tax=P... 65 3e-09 UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=... 65 3e-09 UniRef50_Q7MCL9 Putative transcriptional regulator n=1 Tax=Vibri... 65 3e-09 UniRef50_C3JP42 Transcriptional regulator, LysR family n=4 Tax=A... 65 3e-09 UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=A... 65 3e-09 UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=M... 65 3e-09 UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=P... 65 4e-09 UniRef50_Q2T8G4 Transcriptional regulator, LysR family n=14 Tax=... 65 4e-09 UniRef50_A3YI62 Transcriptional regulator, LysR family protein n... 65 4e-09 >UniRef50_P30979 Uncharacterized HTH-type transcriptional regulator ybeF n=45 Tax=Enterobacteriaceae RepID=YBEF_ECOLI Length = 317 Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/317 (100%), Positives = 317/317 (100%) Query: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI 60 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI Sbjct: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI 60 Query: 61 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT 120 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT Sbjct: 61 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT 120 Query: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ 180 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ Sbjct: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ 180 Query: 181 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI 240 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI Sbjct: 181 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI 240 Query: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS Sbjct: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 Query: 301 LRDPILHGVIDVIRNAF 317 LRDPILHGVIDVIRNAF Sbjct: 301 LRDPILHGVIDVIRNAF 317 >UniRef50_Q32IV1 Putative transcriptional regulator LYSR-type n=1 Tax=Shigella dysenteriae Sd197 RepID=Q32IV1_SHIDS Length = 311 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 258/311 (82%), Positives = 262/311 (84%), Gaps = 45/311 (14%) Query: 52 VLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEG 111 +LNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDI G Sbjct: 1 MLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIAG 60 Query: 112 SYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDN 171 SYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDN Sbjct: 61 SYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDN 120 Query: 172 MFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRV 231 MFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPE QNFSGLRQR+ Sbjct: 121 MFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEGQNFSGLRQRI 180 Query: 232 QEMFPDRQINFTSYN--------------------------------------------- 246 QEMFPDRQI+FTS+ Sbjct: 181 QEMFPDRQISFTSFTSYTSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNSYN 240 Query: 247 ILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPIL 306 ILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLR PIL Sbjct: 241 ILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRAPIL 300 Query: 307 HGVIDVIRNAF 317 HGVIDVIRNAF Sbjct: 301 HGVIDVIRNAF 311 >UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=Enterobacteriaceae RepID=B4TAI7_SALHS Length = 317 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 218/317 (68%), Positives = 265/317 (83%) Query: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI 60 M NNQ E + + + KPQIF TLRNIDLNLLTIFEAVYVHKGIVNAAK+LNLTPSAI Sbjct: 1 MSDNNQAERQPADQHLQDKPQIFRTLRNIDLNLLTIFEAVYVHKGIVNAAKILNLTPSAI 60 Query: 61 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT 120 SQSIQKLR IFPDPLFIRKGQGVTPT +A HLHEYISQGLESILGALD+ GSYDKQRTIT Sbjct: 61 SQSIQKLRTIFPDPLFIRKGQGVTPTTYATHLHEYISQGLESILGALDLTGSYDKQRTIT 120 Query: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ 180 I TTPSVGALV+P+IY+AI+ YPQLLLRN P+ DAE+QLSQFQTDLII+ NR++Q Sbjct: 121 IGTTPSVGALVMPIIYQAIRPRYPQLLLRNIPVDDAESQLSQFQTDLIINTHSYNNRSIQ 180 Query: 181 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI 240 HHVLF+D + ++CR+ +P L+ E +++A H L+ E Q+ S LRQR+QE FPD+QI Sbjct: 181 HHVLFSDTLEIVCRQHHPCLANAITEERLNSADHTFLMLEGQHLSLLRQRLQETFPDQQI 240 Query: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 +F+SYNI TIA+L+A+SD+L ++P+RFY+LFSRCWPLE+LP+ +N EQ++FS+HYNK S Sbjct: 241 SFSSYNIFTIASLIASSDLLGLMPTRFYDLFSRCWPLERLPYAPVNSEQVEFSLHYNKLS 300 Query: 301 LRDPILHGVIDVIRNAF 317 LRDP+L VID+IR AF Sbjct: 301 LRDPVLENVIDIIREAF 317 >UniRef50_D0YJS8 Transcriptional regulator, LysR family n=2 Tax=Klebsiella RepID=D0YJS8_KLEVA Length = 319 Score = 333 bits (855), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 162/317 (51%), Positives = 217/317 (68%) Query: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI 60 M N R+ Q+F LRNIDLNLLTIFEAVYVHKGIVNAAK+LN+TPSAI Sbjct: 1 MPENTSPSESPERQDERYDRQMFRILRNIDLNLLTIFEAVYVHKGIVNAAKILNITPSAI 60 Query: 61 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT 120 SQSI KLR +FPDPLFIRKGQGV PTA+A HLH+YIS+G+E+ L ALDI GS +QR IT Sbjct: 61 SQSINKLRALFPDPLFIRKGQGVMPTAYATHLHQYISRGMEAFLSALDIAGSPHQQRVIT 120 Query: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ 180 IATTP +GAL++P++ A+K +PQ+LL N I+DA QL Q Q DL+ID + + + Sbjct: 121 IATTPGMGALLIPIVASALKPAFPQILLHNIAITDAARQLDQRQVDLLIDTHLHSGQAIS 180 Query: 181 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI 240 HHVL+ D + + CR +P L D + LLLPE Q + L +R+QE +R+ Sbjct: 181 HHVLYQDRVRMYCRAEHPALHGPQDEAHLAQYEFALLLPEGQRYPTLHRRLQEEMGERRC 240 Query: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 F+++N+LT AA++A SDML + R + + SR WPL+ L F SL +E+I+ ++HYNK S Sbjct: 241 GFSTFNLLTQAAMIAESDMLGLTTERLFAMVSRLWPLQTLDFHSLQDEKINVALHYNKQS 300 Query: 301 LRDPILHGVIDVIRNAF 317 ++P+L +I+ + AF Sbjct: 301 GKEPLLKEIIETVIQAF 317 >UniRef50_UPI000190F23D putative DNA-binding transcriptional regulator n=5 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190F23D Length = 186 Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 109/186 (58%), Positives = 150/186 (80%) Query: 132 LPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVL 191 +P+IY+AI+ YPQLLLRN P+ DAE+QLSQFQTDLII+ NR++QHHVLF+D + + Sbjct: 1 MPIIYQAIRPRYPQLLLRNIPVDDAESQLSQFQTDLIINTHSYNNRSIQHHVLFSDTLEI 60 Query: 192 ICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 +CR+ +P L+ E +++A H L+ E Q+ S LRQR+QE FPD+QI+F+SYNI TIA Sbjct: 61 VCRQHHPCLANAITEERLNSADHTFLMLEGQHLSLLRQRLQETFPDQQISFSSYNIFTIA 120 Query: 252 ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVID 311 +L+A+SD+L ++P+RFY+LFSRCWPLE+LP+ +N EQ++FS+HYNK SLRDP+L VID Sbjct: 121 SLIASSDLLGLMPTRFYDLFSRCWPLERLPYAPVNSEQVEFSLHYNKLSLRDPVLENVID 180 Query: 312 VIRNAF 317 +IR AF Sbjct: 181 IIREAF 186 >UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulator ybdO n=3 Tax=Cronobacter RepID=C9XYN5_CROTZ Length = 334 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 85/295 (28%), Positives = 150/295 (50%), Gaps = 4/295 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L+ DLNLL IFE +Y+++ + AA+ L LTPSAISQS+Q+LR DPLF+R G+G+TP Sbjct: 21 LKKFDLNLLVIFECIYLYRSVSKAAEALFLTPSAISQSLQRLRNQLNDPLFVRSGKGITP 80 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYP- 144 T +LH Y+ L + +++ ++ + P++ A LP + A + HY Sbjct: 81 TTVGTNLHHYLEDNLNQLEQTINMMQGAPLRKNFVLYCPPALAADHLPGLVSAFREHYDF 140 Query: 145 QLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 +L + ++ AE+ L+ + DLII T+ +V F++ VL+C E +P L Sbjct: 141 ELEHYDTSLASETAEDLLAYRKADLIIGMAPVTSHSVICKHCFSEETVLVCSENHPRLGD 200 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 D + L + + E+ +RQI FTS ++ +I A++ ++D + I Sbjct: 201 HADDAALAQEKFTLFNGTAEGQKHYHVKSGELIGERQIAFTSNSLSSIMAIIGSTDFIGI 260 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +P+ + + + L + + + D+ + YN+ SL + + +I F Sbjct: 261 LPAPALRRYRQVFGLRPVKL-NFSLPHYDYYLIYNRASLTNASFVSFVSLIEQHF 314 >UniRef50_UPI0001826721 hypothetical protein EcanA3_12211 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826721 Length = 299 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 86/294 (29%), Positives = 153/294 (52%), Gaps = 10/294 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L+ DLNLL IFE +Y + I AA+ L +TPSA+SQS+Q+LR DPLFIR G+G+TP Sbjct: 7 LKKFDLNLLVIFECIYQNLSISKAAETLYITPSAVSQSLQRLRNQLNDPLFIRSGKGITP 66 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIAT----TPSVGALVLPVIYRAIKT 141 T ++LH ++ Q L + ++I S ++ I TP++ +L I + Sbjct: 67 TTVGVNLHHHLEQNLNQLEQTINIMHSSGLKKNFVIYCPQILTPNI---LLDPIKLLMDK 123 Query: 142 HYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 H ++ L + +S AEN L+ + DL+ NR++ ++ M L+CR+G+P Sbjct: 124 HNYEIELHDVMVSPDSAENLLAYRKADLVFAIAPVNNRSLACNLFHKLQMNLVCRKGHPR 183 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 LS+ R+ + N L + +++++ P+R ++F S + LTI +++ SD+ Sbjct: 184 LSVSPTRQDLLNEKFAAYLSDGSGVKTFQEKIEHALPERTVSFRSDSYLTILSMLTVSDL 243 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + ++P + + L+ L + +D + YN+ +L + I+ I Sbjct: 244 VGVVPENAFRQYGDALGLKVLE-TDIAIPTVDIFMLYNRSALNSSVFSSFIEEI 296 >UniRef50_P77746 Uncharacterized HTH-type transcriptional regulator ybdO n=94 Tax=Enterobacteriaceae RepID=YBDO_ECOLI Length = 300 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 12/299 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L+ DLNLL IFE +Y H I AA+ L +TPSA+SQS+Q+LR F DPLFIR G+G+ P Sbjct: 7 LKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAP 66 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 T ++LH ++ + L + ++I + ++ I + ++ R ++ Sbjct: 67 TTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSV 126 Query: 146 LLLRNPPISDAENQ---LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + + + AEN L + DL+I M +R+V L T LIC +P ++ Sbjct: 127 EIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITD 186 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 E I L+ + ++ + E F +R+I+F ++LTI +A +D+L I Sbjct: 187 NSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGI 246 Query: 263 IPSRFYNLFSRCWPLEKL----PFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +P YN + L+++ P PS I I YNK SL + + ID + +F Sbjct: 247 VPYELYNSYRDFLNLKEIKLEHPLPS-----IKLYISYNKSSLNNLVFSRFIDRLNESF 300 >UniRef50_C5BHM7 Transcriptional regulator, LysR family n=2 Tax=Edwardsiella RepID=C5BHM7_EDWI9 Length = 314 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 91/303 (30%), Positives = 146/303 (48%), Gaps = 29/303 (9%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L+ DLNLLT+FE V++H + AA + TPSA+SQS+QKLR F DPLFIR G+G++P Sbjct: 12 LKGFDLNLLTVFEMVFLHNSVSRAAAAMGTTPSAVSQSLQKLRQHFDDPLFIRAGKGISP 71 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKT---- 141 TA + LH+ I+QGL I L+ S ++R + V VLP A++ Sbjct: 72 TALGVCLHDQIAQGLSLIENTLNATLSAKQRRKFVVFAPCCVALQVLPAAVSALERLGVG 131 Query: 142 ----HYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 HY + +P + AE L+ + D++ T V + + L+CR+G+ Sbjct: 132 YELLHYSEYADYHPH-TIAEQLLNFRKADVVFSTTPVTAHAVHCLPFANEPLALVCRDGH 190 Query: 198 PLLS-------LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTI 250 P L L +R I AH + F+ L ++ S + ++I Sbjct: 191 PRLGEACSEVQLSGERFVILQRAH----SDGDRFAFLH--------GGRVVLRSDSFISI 238 Query: 251 AALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVI 310 +V++SD+L ++P + + L + + I + YNK SLR+P ++ Sbjct: 239 LGVVSHSDLLTVLPREVALRYGASFKLRVVE-TAFAIPPISLYLTYNKLSLRNPEFRNLL 297 Query: 311 DVI 313 DV+ Sbjct: 298 DVL 300 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 78/284 (27%), Positives = 144/284 (50%), Gaps = 6/284 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LRN+DLNLL +F+AVY I +AA+ L L+ A+S ++ +LR F DPLF+R G+GV P Sbjct: 6 LRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRAGRGVKP 65 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T + + E + + L I D + S D +RT I + A+++P + R I H Sbjct: 66 TLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRIVIVDPLEAMLMPTMLREISAH 125 Query: 143 YPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 PQ+ + R P ++ + + DL + + + + V++ R G+P + Sbjct: 126 APQVTIESRPPWNTNVADAIIAGTLDLACYTFPVSAPGLVFKTICPCDHVIVARRGHPKI 185 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 D ET + A V L+PE + + + + + +R+I + + ++ +V ++D++ Sbjct: 186 GATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWSMPGVVGSTDLV 245 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 ++P RF L + + L+ P Q D+ + +++ + DP Sbjct: 246 TVMPRRFAELMAPKFGLQIFESPIPISPQ-DYHMIWHEKNTDDP 288 >UniRef50_B5XZT9 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XZT9_KLEP3 Length = 310 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 13/297 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L+ DLNLL IFE +Y H I AA +L +TPSA+SQS+Q+LR DPLF+R G+G+TP Sbjct: 7 LKKFDLNLLVIFECIYQHLSISKAAAMLFITPSAVSQSLQRLRQQLNDPLFVRVGKGMTP 66 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 T ++LH ++ Q LE + +++ + ++ I I P ++ + + H Sbjct: 67 TTACVNLHYHLQQNLEQLEKTINLNNRSELRKRIVIYGPPLFCSVNSHFMINEL-CHQAN 125 Query: 146 LLLRNPPIS---DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 L + + ++ AE L+ Q DL+ M TNR T + +CR +P Sbjct: 126 LQIEHHNLTTTESAEELLAYRQADLVFTRMPITNRATICQPYQTVQTLAVCRADHP---R 182 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQE----MFPDRQINFTSYNILTIAALVANSD 258 D +I+ A N + QRVQ+ I F S + +TI ++ +D Sbjct: 183 RDQLTSIEALAQEFFTHYITN-DPVIQRVQQSSTPWLNPGNIAFRSDSFMTILNMINKTD 241 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++ IPS Y+ S PL L +L E I I+Y++ S ++ L +I ++ N Sbjct: 242 LIGFIPSYLYDFISPAMPLHALDIEALFPE-ITIYINYHQSSTQNHFLSELISILMN 297 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 5/262 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR++DLNLL +F+A+ + AA L ++ AIS ++Q+LR DPLF+R QG+ P Sbjct: 5 LRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQGMVP 64 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKTH 142 T A LH +SQ L ++ LD + QR + + +VLP + +++ Sbjct: 65 TPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTRLRSE 124 Query: 143 YPQLLLRNPPISDAENQ-LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P +++ D Q L + DL +D N ++ VL + + ++ R+ +P L Sbjct: 125 APNVVVEVALAGDDMPQRLYTAEADLAVDAFATENDRLRRQVLLAERLAVVARKDHPDLW 184 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + ++ +A HV +LP+ L Q + E R+ ++ A + SDM+A Sbjct: 185 DDCSKQQFLDAEHV-VLPDRNRRLPLDQILNEPGWQRRTGARVTQFASMLATCSRSDMIA 243 Query: 262 IIPSRFYNLFSRCWPLEKLPFP 283 +P R ++R + L+ LPFP Sbjct: 244 TVPERLAQQYARAFGLKTLPFP 265 >UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=Shewanella RepID=A8H6N4_SHEPA Length = 305 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 141/265 (53%), Gaps = 7/265 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 ++ DLNL IF AVY AA+ L+LT S++S +I +L++ + LFIR G+GV PT Sbjct: 5 KSFDLNLFRIFTAVYRTSSFSRAAEELDLTQSSVSNAITRLKLAVGEELFIRVGRGVKPT 64 Query: 87 AFAMHLHEYIS---QGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 A AM+L++ ++ +E + + ++ + +RT + + S L+ ++ + ++ Sbjct: 65 ASAMNLYQQLASPVSEIEQVASSFELFDAKRSERTFYVYASESAILLLQGIVEQFLEELS 124 Query: 144 PQLLLRNPPISDAENQ--LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 L+ R PP+ + E Q L + DL +D + + + + D +V + R+G+P +S Sbjct: 125 INLVFREPPLIEEELQMDLQLEKVDLALDIWLPESSSFKSQKVMQDKLVCVARKGHPRIS 184 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 +E N H++ N S +++ P R+++ +IL++ AL + SD LA Sbjct: 185 GAITQEQYFNEKHIIFKMRRDNLSVADLLTKQVLPARKMHSEQSSILSMMALASKSDALA 244 Query: 262 IIPSRFYNLFSRCWPLE--KLPFPS 284 I+ + + +++ + L+ +LPF + Sbjct: 245 IVSKSYTDEYAQLFGLQVFELPFAA 269 >UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=Vibrio mimicus VM573 RepID=D2YJX0_VIBMI Length = 314 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 7/265 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR+ DLNLLT+F+AV + AA LN+T +A+SQ++ +LR +PLFIR+G+G+ P Sbjct: 15 LRDYDLNLLTVFDAVMTLGSVNKAADKLNMTSAAVSQNLSRLRDQVGEPLFIRQGRGLQP 74 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T +A+++H+++S GL +I L+ +D R I +VLP + R I Sbjct: 75 TQYALNMHKHVSAGLSAIRFGLETNACFDPATSTREFVIGGHGYFDLVVLPQLLRKISEV 134 Query: 143 YPQLLLRNPPISD----AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + P D LS+ + DL + ++ ++ ++ + + +V++ + +P Sbjct: 135 APHITVNLKPYEDDHFTPSQVLSEREADLFLASLPISHPSIITTQIAEEALVVVYAKNHP 194 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L + + H L + + P R++++ S ++L + A + +D Sbjct: 195 RLGETLTFQQFFDEKHTALTSRRFGHYLFSSLLDQALPARKVHYQSDSMLNLMATASVTD 254 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFP 283 +L P R ++++ L P P Sbjct: 255 LLCFTPKRLADMWAEKLGLHIQPLP 279 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 21/270 (7%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR+IDLNLL +F+A+ + AA+ L ++ AIS ++Q+LR F D LF+R G+TP Sbjct: 5 LRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHHGMTP 64 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A LH+ + L ++ L+ E +D QR I + +VL + ++ Sbjct: 65 TPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLATLRQQ 124 Query: 143 YPQLLLR-NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P ++L D ++L + + DL +D + +Q +VL + +V+I R +P + Sbjct: 125 APHVVLEIIAADDDMPDELHKGRADLSVDAFVADDDRLQRNVLLEEKLVVIARRSHPHIK 184 Query: 202 LEDDRETIDNAAHVLL------LPEEQ--NFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 D++ +A HV+L LP +Q N G ++R R F S + A+ Sbjct: 185 GHCDKQQFLDAEHVVLPNRNRQLPLDQILNAPGWQRRTGA----RVTQFAS-----MLAV 235 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 SD++A +P R ++ L+ LPFP Sbjct: 236 CGGSDLIATVPDRLAQQYAETMQLQVLPFP 265 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/296 (27%), Positives = 145/296 (48%), Gaps = 17/296 (5%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL +F+ +Y + AAK L+LT AIS S+ +LR F DPLF R+G + PT A Sbjct: 7 DLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQMVPTPLA 66 Query: 90 MHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 E + GL I A++ ++D +++T + + + LP + + YP + Sbjct: 67 RRFLESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKLAP-YPDM 125 Query: 147 LLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 +++ ++ D E QL+ + D ID + + H +L D +V++ R+G+P+++ Sbjct: 126 EVQSQRVARRDMETQLAAGKLDFAIDVLLPVSNQTSHELLRQDRLVVLARKGHPVIAQGL 185 Query: 205 DRETIDNAAHVLLL-----PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 D + A H+L+ P ++F R Q R I + +V +SD+ Sbjct: 186 DMASYLEARHILVSSRAEGPGIEDFELSRHGAQ-----RTIRLRCQHYYAACRVVESSDL 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 L +P + + ++ +E L P + ID ++++K ++P L D++RN Sbjct: 241 LLTMPETYARIIAQNTDIEVLA-PPVEMPSIDVHLYWHKAYEQEPALVWFRDLLRN 295 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 9/285 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR +DLNLL FEA+Y I +AAK LN++ IS ++ +LR DPLFIR G+GV P Sbjct: 3 LRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGVAP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A + + L+ I + +D +R I + +++P + RA++ Sbjct: 63 TPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAVQD- 121 Query: 143 YPQLLLRNPPISD---AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 Y + L P+ D AE L+ DL + + ++ + +V++ R+G+P Sbjct: 122 YRSVTLEMLPVMDFPIAEG-LNDGSLDLALTTFDPQHGDIECEQVGAAKIVIVARKGHPR 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + E + HV L+P+ + S + + ++ DR I + + ++ANSD+ Sbjct: 181 IKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFWSFPHILANSDL 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 +A++P F + +PL+ P P EQ + I + L DP Sbjct: 241 IAMMPGDFAAHAALFYPLDIFPVPFEFPEQHIYMIWKKRHGL-DP 284 >UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=Vibrio RepID=A5F3E5_VIBC3 Length = 308 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 132/265 (49%), Gaps = 7/265 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR+ DLNLLT+F++V + AA L +T +A+SQ++ +LR DPLFIR+G+G+ P Sbjct: 4 LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T +A+++H+++++GL +I L+ + +D +R I +VLP + + I Sbjct: 64 TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123 Query: 143 YPQLLLRNPPISD----AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + D LS+ + DL + + ++ ++ + + +V++ + +P Sbjct: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAKNHP 183 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L E H L V ++ P R++++ S ++L + A + +D Sbjct: 184 RLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATASVTD 243 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFP 283 +L P R ++++ L+ P P Sbjct: 244 LLCFTPKRLADMWAEKLGLQIQPLP 268 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 6/255 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +L +DLNLL +F+A+ + + A + L L+ AIS S+ +LR +F DPLFIR G+ Sbjct: 14 SLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGMQ 73 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKT 141 PT A+ L +++ L+++ AL +D RT ++ + + LP I A+ Sbjct: 74 PTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEALHQ 133 Query: 142 HYPQLLLR-NP-PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P++ LR P P+ + E+ L + D I N+ +H LF + V + R+ L Sbjct: 134 QAPRVRLRIEPLPVEEIEDALRASRLDFAIGNLPTLTARTRHQALFEETYVCMTRKRRGL 193 Query: 200 -LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E + +A+HV + E + L + R I + + + +++A +D Sbjct: 194 PRAKELSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELPHFVALPSVLAVTD 253 Query: 259 MLAIIPSRFYNLFSR 273 + A +P R +F+R Sbjct: 254 LFATLPRRLAQIFNR 268 >UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobacteraceae RepID=A0NZC9_9RHOB Length = 305 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 5/283 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR+ DLNLL IF A+ I AA + L+PSA+S ++ +LRV+ D LF R +GV+P Sbjct: 4 LRSFDLNLLVIFRAIMQRGSISGAANEIGLSPSAVSHALARLRVMLNDELFFRTAEGVSP 63 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKTH 142 T A L I +GL I A+ ++ + + R T+ V +LP + + +++ Sbjct: 64 TERARELSVDIERGLSFISTAISLQHQFVPAETNRVFTMQVADYVAGFLLPRLAKRLQSE 123 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + + P S E+ + + + V+ L D +V++ R G+P + Sbjct: 124 APGITIDILPFSISPESVWDRVDMQVRLTPGRLQPEMVRSQRLLADEIVVLMRRGHPRVD 183 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 E HV L + + + R + T + I +VA SD++A Sbjct: 184 EPMTAELYAELPHVKLSQSATGTTVIEDALAARGLKRHMAMTVASWFEIPDIVARSDLIA 243 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 I P R +L R L P P L+E F + ++ R+P Sbjct: 244 IAPQRLLSLDPRLGKLHSAPLP-LDEVVFSFDLCWDLRKEREP 285 >UniRef50_B7MRR6 Putative uncharacterized protein n=5 Tax=Escherichia RepID=B7MRR6_ECO81 Length = 109 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 51/61 (83%), Positives = 51/61 (83%), Gaps = 1/61 (1%) Query: 116 QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCT 175 QR I PSVGALVLPVIYRAIKTHYPQLLLRNPPI AENQLSQFQTDLI DNMFCT Sbjct: 49 QRKCLICP-PSVGALVLPVIYRAIKTHYPQLLLRNPPIGGAENQLSQFQTDLITDNMFCT 107 Query: 176 N 176 Sbjct: 108 G 108 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/59 (67%), Positives = 42/59 (71%) Query: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSA 59 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDL LLTI + K + K L PS Sbjct: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLTLLTILKLHMSIKESLMQRKCLICPPSV 59 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 9/270 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNL +F+A+Y I AA+ LNLT A+S ++ +LR +F DPLF R+GQG+ P Sbjct: 6 LSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRGQGMAP 65 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTI---TIATTPSVGALVLPVIYRAIKTH 142 T A L + L+S L +D T+ TI ++ + +LP + + + Sbjct: 66 TPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTIGMRDALESTLLPPLMARVTSV 125 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 PQ+ + + E++L D ID + + + H D M+++ R +PL+ Sbjct: 126 APQVEIAAIRFDRREMESELLAGTIDAAIDILLPVSPAIHHAQFMADPMIVLARRDHPLV 185 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E E A HV + + Q + M R++ + +V+ +D+L Sbjct: 186 KKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHYAAACRVVSCTDLL 245 Query: 261 AIIPSRFYNLFSRCWP--LEKLPF--PSLN 286 A +P R+ + + + + LPF PSL Sbjct: 246 ATLPLRYARIANEPYANRILSLPFKVPSLE 275 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 14/267 (5%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 +++DLNLL IF+A+ + AA+ L ++ SA+S+ + +LR F DPLF+R +GV PT Sbjct: 4 KHLDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGVVPT 63 Query: 87 AFAMHLHEYISQ---GLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 A+ + + + Q L S+ G + + I T V ++LP + R ++ Sbjct: 64 HRALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQETA 123 Query: 144 PQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P L L + E L + DL+I ++ N + LF D+ V +CR G+P L+ Sbjct: 124 PHVSLTLHDMESMMPEEMLLAGKVDLVISSVASVNFPIYRQELFRDHYVCLCRAGHPALA 183 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRV-----QEMFPDRQINFTSYNILTIAALVAN 256 E ++ H L +P + +G R+RV Q + R + ++L I A + Sbjct: 184 DPVPIEQFVSSRH-LAMPRQ---NGARERVLQDTLQRLGVTRDVAVQVPHMLAIPATLTA 239 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFP 283 +D++A + R F+ PL+ L P Sbjct: 240 TDLVATMACRVAREFAARHPLQVLAHP 266 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/268 (27%), Positives = 139/268 (51%), Gaps = 16/268 (5%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +DLNLL IF+A+ + I AA+ L +T ++S ++ ++R + DPLFI++G+G+ P Sbjct: 5 MSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGRGIKP 64 Query: 86 TAFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 + FA+ L + ++ LE I A+ + + +RT IA T L P + R ++ H Sbjct: 65 SPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIAITDGTSGLFWPALRRHLERHA 124 Query: 144 PQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQ--HHVLFTDNMVLICREGNPLL 200 P++ L P D E L + DL++D + NR Q LF + V + + + Sbjct: 125 PKINLHAVPYKLDGEALLVNAEVDLVLD--YYENRHPQILSQHLFDNQFVCVMAKAH--- 179 Query: 201 SLEDDRETIDN--AAHVLLLPEEQNFSG-LRQRVQEMFPDRQINFTSYNILTIAALVANS 257 +L + T+D+ AA LL+ + SG + +++ ++ R+I T + + L+ S Sbjct: 180 ALSEKTLTLDDFAAAEHLLVSLSGDASGTVDRKLAQLGHSRRIAMTVNSFASAKTLIEES 239 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSL 285 +++ +P Y++ + L+KL +L Sbjct: 240 RLISTLP---YSIIASWQSLDKLTVKTL 264 >UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q081Z6_SHEFN Length = 303 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 134/273 (49%), Gaps = 9/273 (3%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 IDLNL +F+A+Y I AA VLNL+ A+S S+ KLR F D LFIR+G + PT Sbjct: 3 IDLNLFVVFDAIYCEGNITKAASVLNLSQPAVSHSLGKLRTHFDDALFIRQGNEMRPTPV 62 Query: 89 AMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A ++ + + + L + L ++ +++ +++ S+ LP++ +++ P Sbjct: 63 AKNVIDDVREALHQLQVCLVQSRQFEPLTSRKSFSLSLHGSLEPYYLPILQQSLSLESPS 122 Query: 146 L-LLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + L N + ++ EN+L+ DL ID + + + H L D +V++ R+ +P ++ Sbjct: 123 INLSSNKRVRRTELENKLASGDIDLAIDTLIPVSNNIMHTQLELDQLVVVARKNHPAMNP 182 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 + D T HVL+ S + + R+I+ + L+ ++ N+DML Sbjct: 183 DLDLATYLKLDHVLVSSRSTGPSLEDFELSRIGLHRKISLRCQHALSACRVILNNDMLLT 242 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIH 295 +P ++S+ ++ P P E D +H Sbjct: 243 LPKTAAAMYSKMLDIDIHPMPV---ELPDIGVH 272 >UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobacteria RepID=Q7MC61_VIBVY Length = 313 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 8/278 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL F+ V + + AA+ L +T A+S ++ +LR + DPLFIR+G+G+TPT F Sbjct: 15 MDLNLLKTFDVVMKTRSVNEAAETLGITAPAVSHALNRLRDQYQDPLFIRQGRGITPTNF 74 Query: 89 AMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ LH I + L +L ++ RT +++ + ++LP + + H P Sbjct: 75 AIELHAEIQEPLSLLLNGAKSRQQFNPDTSHRTFRLSSHKDIDLMLLPPLMDHLAQHAPN 134 Query: 146 LLL----RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 + L + D + L + D+I+ + + +LF +V++CR+ +P + Sbjct: 135 VKLCADVEHLDERDRQADLRTRKVDMILATVPFDEHGYHNELLFELPLVMVCRQDHPRIQ 194 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + H+L + QN + E P R I + + + + A +D + Sbjct: 195 NTITHQQFFAEQHLLWETKRQNQDIVDSLALEPQPQRNIAYKTGSSCNAIMMAAQTDWIC 254 Query: 262 IIPSRFYNLFSRCWPLEKLPFP-SLNEEQIDFSIHYNK 298 + +L ++ L+ +P P LN+ I + H+++ Sbjct: 255 VTGQWHADLMAKAHQLQVMPLPFKLNKLPIYMTWHHSQ 292 >UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomonas sp. A4 RepID=Q1MWN1_9SPHN Length = 302 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 21/271 (7%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +R++DLNLL +FE V+ + +V AA++L ++ A+S +++KLR + D LF+R G+ P Sbjct: 4 IRDVDLNLLRVFECVFQTRKVVEAAEILGISQPAVSNALKKLRELLNDELFVRTRSGMIP 63 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T +AM L E IS L+++ A++ S+D +R IAT+ P + I+ Sbjct: 64 TQYAMQLAEPISYALKTLEIAIEASESFDPRRDKRHFVIATSDLGDMYFGPKLISHIRDI 123 Query: 143 YPQLLLR-----NPPISDA-ENQ----LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLI 192 + + P I ++ EN L F+ DLI NMF LF ++ Sbjct: 124 SQDITIEFVGNSRPHIFESLENGEVDILLGFRPDLIT-NMFVFR-------LFYQGWRIL 175 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 R+ +P+ S + RE + + + E + + + ++ DR I + N T+A Sbjct: 176 ARKDHPIFSSKAPREDLLACRWIGVRSEGSGSASVNAELLKVGMDRNIVVWTSNFGTLAP 235 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 L+A D+ A +P + + + L+ +PFP Sbjct: 236 LLAVGDLAACVPEIYTTVIDEAFGLKSMPFP 266 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/286 (27%), Positives = 143/286 (50%), Gaps = 11/286 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +RNIDLNLL IF+A+ I AA+ L++T A+S ++ ++R ++ DPLF++ G+G+ P Sbjct: 1 MRNIDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQP 60 Query: 86 TAFAMHLHEYISQGLESILGAL---DIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L +S L + A+ D + S ++R + + + LP + R ++T Sbjct: 61 TTHALSLWHQVSGPLIQLKDAVNPQDFDPSTTRRRFRVGMSDITTDLIWLP-MRRMVETE 119 Query: 143 YPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L P +++E+ L+ + DLI+ M + ++ LF + V R+ +PL Sbjct: 120 APNIDLHAVPANGNNSESILTNGEVDLIVGVMQEFRTSFRNDFLFESDYVCAMRKDHPLA 179 Query: 201 SLEDDRETIDNAAHVL--LLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E A H+L L E F + Q + R++ T + ++ AL+ SD Sbjct: 180 AEPLTLEKYLKADHLLVSLTGEATGFVDITLSQQGL--SRRVAMTVNHFASVPALLEGSD 237 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 +++I+P+ ++C L + P L S+ ++ RDP Sbjct: 238 LISIVPNMVIAKGAKCGSLH-VTKPPLEIRPTPVSMIWHARHDRDP 282 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/302 (25%), Positives = 140/302 (46%), Gaps = 14/302 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + ++DLNLL F+A+ + + +AA L ++ A+S ++ +LR+IF DPLF+R QG+ P Sbjct: 3 IASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGMQP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T +A L E +S+ E I AL I +D +T + T L+LP + + I+ Sbjct: 63 TPYAEQLIEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKHIQVA 122 Query: 143 YPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + +R P A+ ++ + DL + L+TD I R+G+P + Sbjct: 123 APNACVRVRRIPEQGAKEAMANGEIDLAVGLFPYLKAGFYQQRLYTDKFACIVRQGHPTV 182 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRV--QEMFPDRQINFTSYNILTIAALVANSD 258 + + HV+++ +++ E R+I TS N L + ++ +D Sbjct: 183 HDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHL-RRKIVMTSQNFLVLPMIIEQTD 241 Query: 259 MLAIIPSRFYNL---FSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A IP R +S + + P P N +D H+++ DP + D++ Sbjct: 242 AIATIPFRMAQKIASYSTGIKILESPIPFPN---VDIKQHWHERFHYDPANKWMRDLMVT 298 Query: 316 AF 317 F Sbjct: 299 LF 300 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 8/283 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNL +F+A+Y GI A++VL+LT A+S ++ +LR D LFIR +G+TPT Sbjct: 5 RIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGMTPTP 64 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 +A L + Q L + L + + + + L+LP + + + P Sbjct: 65 YAHQLIGTVRQALNQLQRGLHQGQEFAPAQLETSFRLCVRDLFDVLLLPALIKNCRAIAP 124 Query: 145 QLL---LRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 +++ LR+P + L+ + DL D + + ++ H LF D + + R +P L+ Sbjct: 125 KVVFNCLRSPR-EQILHDLASGRIDLAADVLISHDDSICHEKLFEDRLTCLLRRDHPALA 183 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 E + HV + E ++ R++ + N A ANSD++ Sbjct: 184 SEWSLAEMLRWPHVQVSSREHGPGYEDIQLSRHGLQRKLGLRTPNFYGAALTAANSDLIL 243 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 P + ++ PL+ +PFP L ++ +++++ + R+P Sbjct: 244 CAPEQVARKLTQTIPLQVMPFP-LTLNPLETYLYWHRSTDREP 285 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 18/287 (6%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 DLNL +F+A+Y + AAKVLNLT A+S ++ +LR DPLF+R+G + PTA Sbjct: 5 RFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRMVPTA 64 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A + + L L EG +D +RT + + A +LP + P Sbjct: 65 RARAMVSPVRHALGGFQRCLSEEGGFDASEAERTFVLGLRDGLEARLLPALMSQFMDEAP 124 Query: 145 QLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + L++ +S + +L+ + DL D M ++H V+ +V++ RE +PL Sbjct: 125 GIKLQSLTVSRRQMATELASGRLDLACDVMLALPEAIEHQVVLEGPLVVLMRESHPLAQG 184 Query: 203 EDDRETIDNAAHVLLL-----PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 D + + A HVL+ P ++F RQ + R I + + V + Sbjct: 185 MDLPDYL-AAQHVLVSSRREGPGLEDFGLARQGYR-----RHIRLRCQHYQAALSTVQQT 238 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 D+L +P+ S + K PFP ++ +++++ DP Sbjct: 239 DLLLTMPASLAGQLSDQGLVWK-PFPG-GLPGLEMHLYWHRDQSADP 283 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 24/283 (8%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 R++DLNLL +F+A+ + AA +L LTPSA+S S+ +LR I D LF+R +G+ P Sbjct: 6 FRSLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGAKGMNP 65 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ--RTITIATTPSVGALVLPVIYRAIKTHY 143 T A+ L I + L I AL+ + ++ R +IA V A+++P + + Sbjct: 66 TPKALALAVPIRRALVDIQQALNGDSFVPEKTDRRFSIACGDYVTAVLMPEVIARFRKAA 125 Query: 144 PQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 P LR P+ +L + DL + + LF D+MV + R +P + + Sbjct: 126 PLAELRIQPVGAVMKELDAGRIDLAMGGFERIPERLASEPLFADDMVWVMRADSPFANRQ 185 Query: 204 DDRETIDNAAHVLLLPEEQNF--------SGLRQRV------------QEMFPDRQINFT 243 E + H+ + + + +GL +RV +E R + T Sbjct: 186 PTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILDQYFEERGLRRTVAMT 245 Query: 244 SYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLE--KLPFPS 284 + N + A+VA D+ A++P F+ + L K P PS Sbjct: 246 APNPIVAMAIVAECDLAAMMPRNLAEAFADRYKLALWKPPHPS 288 >UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=Gammaproteobacteria RepID=A8H3B3_SHEPA Length = 304 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 141/295 (47%), Gaps = 20/295 (6%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + D NLL IF VY + I AA L LT +S ++++L+ LF+R+G+G++PT Sbjct: 7 KRFDFNLLVIFLEVYQLRSITLAADSLGLTQPGVSAALKRLQATLGVELFVREGRGISPT 66 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDKQ--RTITIATTPSVGALVLPVIYRAIKTHYP 144 A+ L +S ++ AL +DKQ R+ + + L+ P+ + Sbjct: 67 NAAIQLASQVSPAYNTVNSALSNVAGFDKQTPRSFLVYVDEPMMNLLQPLAEQDSDMGNC 126 Query: 145 QLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 +++ + PPI + QLS + DL ID + + + + + +++ +ICR+G+P ++ Sbjct: 127 EIMFQLPPIEEERLLQQLSLQKADLAIDVGQLPSLSYSNQLFYRESVTMICRKGHPRING 186 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 + + H+ L + L +E+ +R+++ +++L++ ALV+ SD +AI Sbjct: 187 KIGKIQFYQEKHITLQIRRATLTALDFFTEEVIGERKVSCECHSLLSMMALVSESDCIAI 246 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 + ++ + L+ + P N + P+LH ++ RN F Sbjct: 247 TSRSIADKYADKFGLQSIE-PPFNTK---------------PVLHNMMWHKRNEF 285 >UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39AY8_BURS3 Length = 331 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 9/267 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LRNIDLNLL +F+ +Y + AA L+LT ++S ++++LR +F D LF++ G+ P Sbjct: 23 LRNIDLNLLLVFDVLYRTRSTTRAADALHLTQPSVSNALKRLRTLFDDALFVKTADGMQP 82 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A + + +GL S+ AL ++D RT + T+ A+ +P + ++ Sbjct: 83 TPRADAIAARVDEGLASLRTALQAGRAFDPATSTRTFRLYTSDLGQAIFMPPLVAHLRRV 142 Query: 143 YP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P +++ +PP+ A+ + Q DL + + LF + V + R +P++ Sbjct: 143 APGIRIVTADPPLDAAQQMMKLGQIDLALGMFTGLHADFHQQRLFHETYVALVRNDHPMI 202 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPD----RQINFTSYNILTIAALVAN 256 E A HV P + + + + P R + + + +V++ Sbjct: 203 GATLTAEQFFAADHVSYTPTAGSHAHFEAALYALSPHAGSTRHVVLQLAHSFGLERIVSS 262 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFP 283 SD++A IPSR +R + + P Sbjct: 263 SDLIACIPSRLARELARLQDVRAVSLP 289 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 10/298 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L N+DLNLL +FEA+Y + + A + LN ++S ++ +LR +F DPLF+R G G+ P Sbjct: 3 LSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGMLP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD----KQRTITIATTPSVGALVLPVIYRAIKT 141 TA A L I LE I AL +D QR +A +LP I ++ Sbjct: 63 TARAHQLMLQIQPVLEQIHQALTPPTRFDPATASQRRFRLAAGDYADITLLPTIISRLRQ 122 Query: 142 HYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + +R + QL + + D+ + + LF ++ I +P Sbjct: 123 AAPGIDIRVSRLDRRTVVQQLERGEIDVALGGHLEVPEGMLVQPLFNESFTCIASRHHPQ 182 Query: 200 LSLED-DRETIDNAAHVLLLPEEQNFSG--LRQRVQEMFPDRQINFTSYNILTIAALVAN 256 ++ E + + H L P + + + QR+ EM +R++ T +I+ + A+VA Sbjct: 183 IAAESWNLQQYIGLPHALYAPSDDGSARGIIDQRLTEMGLERRVAATFSHIIALPAVVAG 242 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPS-LNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 SD++A + + F+ ++ LP PS L + RDP L + D + Sbjct: 243 SDLIATLATSVARQFADPSRIQFLPLPSELAMPAFPIECVAGRQVKRDPALAWLCDTL 300 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 12/293 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR++DLNLLTIF+A+ + +AA + ++ AIS ++ +LRV D LF+ G+GV P Sbjct: 3 LRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGVKP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI-KT 141 T A+ L E + + LE + AL G +D + R TI++ G +V+P + R + K Sbjct: 63 TQRALQLQEPVRRILEDVRAALTSTGEFDPESSDRVFTISSIDYGGIVVIPRLLRYLQKQ 122 Query: 142 HYPQLLLRNPP-ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P ++ NP +A + + DL I + + + +L + + R+ +P + Sbjct: 123 QSPIIVNINPSQTGEAHRDVDRSSGDLTITSDPLLSPDHECKLLRRELPYCLARKDHPDI 182 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + E HVLL L + ++ +R+ + + +V N+DM+ Sbjct: 183 TGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFFNMPYIVGNTDMI 242 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS-------LRDPIL 306 +P + F+R + L+ L P N F + + F+ LRD I Sbjct: 243 CTMPRQMAEDFARQFGLQVLAAPFDNWTASYFMVWHRSFNGDSGHCWLRDSIF 295 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 14/267 (5%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + ++DLNL+ F +Y + + A++L +T ++S S+++LR F D LFIR G+ P Sbjct: 28 MADVDLNLIRTFVLLYETRSVTRTAELLFITQPSVSHSLRRLRRQFNDDLFIRSSDGLAP 87 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A ++ + Q LE I + G +D + RT I T +LP + A++T Sbjct: 88 TVLAASMYPQLHQALEVIDETVSGVGHFDAETSDRTFRICATDLGEISLLPGVLAALETR 147 Query: 143 YPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRT----VQHHVLFTDNMVLICREG 196 P ++ P+ + A +L Q + D +I CT R ++ LF + V +C G Sbjct: 148 APGCAVQVTPLDFASAAEELRQGRADAVI----CTPRIDAPDLRRDPLFREGYVGLCALG 203 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +P + +E + H+++ + Q + M R I + + LVA Sbjct: 204 HPRIGVEPGLDDFLAERHIVVDAAAGHVDA-DQALARMGRRRDIAVRVPHFAVLPELVAQ 262 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFP 283 + LA++PSR LF+R P+ P Sbjct: 263 TRHLAVVPSRVAELFTRSSPVRTFALP 289 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 20/276 (7%) Query: 22 IFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 +F + R +DLNLL +FEA+ + AA L +T A+S ++ +LR DPLF+R G Sbjct: 1 MFVSFRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGT 60 Query: 82 GVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT---IATTPSVGALVLPVIYRA 138 G+ PT A+ L E I + LES+ GALD E +D R T ++ + V +LV+P + Sbjct: 61 GIRPTQRAVVLWEPIGEALESVRGALD-EQVFDPARAQTEFSLSMSDYVSSLVMPDLLGH 119 Query: 139 IKTHYPQLLLRNPP--ISDAENQLSQFQTDLIID---NMFCTNRTVQHHVLFTDNMVLIC 193 + P+ + P I + +QL + D ++ N ++ L+T + Sbjct: 120 LGKVAPKARVHTVPNTILEIADQLEDNRVDCVMSVYVNEAQQPAAIRSRSLWTVDYACFM 179 Query: 194 REGNPLLSLED-DRETIDNAAHVLLLPEEQNFSGLRQRVQEMF-----PDRQINFTSYNI 247 R G+PL ++ T NA HV + + +G ++F R + T + Sbjct: 180 RRGHPLAGMKRLSTRTFLNAGHV-----DVSLAGKTMPSYDLFLASRGLSRNLVATVNHY 234 Query: 248 LTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 +V SD++A++PS + L +P P Sbjct: 235 SAAYEVVRQSDLIAVLPSDLRSQSRHAPLLHAMPLP 270 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 134/282 (47%), Gaps = 17/282 (6%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNL T+FEA+Y+ + AA+ LNLT AIS ++ +LR DPLF+R+G + PT Sbjct: 2 KIDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTP 61 Query: 88 FAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A L I L + GAL + + ++T +A + A +LP + + + P Sbjct: 62 LAQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGLDNIAP 121 Query: 145 QLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + L + I D E++L+ + D ++D + T+ + L D +V+I NP LS Sbjct: 122 NIQLASVHIERRDMESKLASGELDFVVDVLLPTSEQIYKKKLLNDELVVIY---NPALSQ 178 Query: 203 EDD---RETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + E A H+L+ S + + +R + + + +++ M Sbjct: 179 LPEGFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYYAACQVASDNGM 238 Query: 260 LAIIPSRFYNLFSRCWPL---EKLPFPSLNEEQIDFSIHYNK 298 L +PSR+ ++ + +P LPF + ID +++++ Sbjct: 239 LLTMPSRYASILLQHFPTLQRSSLPFKT---SSIDVYLYWHE 277 >UniRef50_P46924 Probable HTH-type transcriptional regulator leuO n=122 Tax=Gammaproteobacteria RepID=LEUO_SALTY Length = 314 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 26/291 (8%) Query: 18 GKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFI 77 GKPQ LR +DLNLLT+F+AV + I AA L ++ A+S ++ +L+V+F D LF+ Sbjct: 15 GKPQ----LRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPAVSNAVARLKVMFNDELFV 70 Query: 78 RKGQGVTPTAFAMHLHEYISQGLESILGALDIEG--SYDKQRTITIATTPSVGALVLPVI 135 R G+G+ PTA A L + Q L+ + L G +R + + ++ I Sbjct: 71 RYGRGIQPTARAFQLFGSVRQALQLVQNELPGSGFEPTSSERVFNLCVCSPLDNILTSQI 130 Query: 136 YRAIKTHYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 Y ++ P ++ + + E+QL +T+ +I LF D MVL+ Sbjct: 131 YNRVEKIAPNIHVVFKASLNQNTEHQLRYQETEFVISYEEFRRPEFTSVPLFKDEMVLVA 190 Query: 194 REGNPLLS---LEDDRETIDNAAH-VLLLPEEQNFSGLRQRVQEMF--PDRQ--INFTSY 245 +P +S LE D + N H V+ L +FS Q + PD+Q + + Sbjct: 191 SRKHPRISGPLLEGD---VYNEQHAVVSLDRYASFS------QPWYDTPDKQSSVAYQGM 241 Query: 246 NILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP-SLNEEQIDFSIH 295 ++++ +V+ + ++AI P F+ L+ LP P LN S H Sbjct: 242 ALISVLNVVSQTHLVAIAPRWLAEEFAESLDLQILPLPLKLNSRTCYLSWH 292 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 136/294 (46%), Gaps = 6/294 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +L+++DLNLL F+A++ + + AA+ LN++ +S ++ +LR+ F D LF+R +G+ Sbjct: 5 SLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAPRGIE 64 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKT 141 PT + + + + L I ALD ++D + R I VLP + + Sbjct: 65 PTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLAYMAE 124 Query: 142 HYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 H P L LR+ I + + L + D ++ F + + + V R G+PL Sbjct: 125 HAPMIDLRLRSVDIEEGMDLLDAGELDFMMHMEFPAAKRFGVRPVLHERHVFATRAGHPL 184 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + D T + +HV + S + + + + R++ T+ ++ T+A LV +D+ Sbjct: 185 VREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYRRRVAITTQHMTTVAHLVKTTDL 244 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +A +PSR P P E+ ++++N+ D + + D I Sbjct: 245 VASVPSRMAARMVEEGGFAVYPIP-FQIEKAPVAVYWNRRFELDGAMRWMRDAI 297 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/274 (27%), Positives = 129/274 (47%), Gaps = 10/274 (3%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL +F A+ + + AA+ L +T A+S ++ +LR DPLFIR+ G+ PT A Sbjct: 4 DLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTEMA 63 Query: 90 MHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTHYPQL 146 L I L S+ + + ++D R TIA V +++PVI ++ P + Sbjct: 64 EALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRECAPGI 123 Query: 147 LLRNPPISD--AENQLSQFQTDLIIDNMF--CTNRTVQHHVLFTDNMVLICREGNPLLSL 202 LR P + AE T++++ + N VQH L D + + R+ +P ++ Sbjct: 124 RLRLTPFGNDLAETGAMSGATEMVLGRIVEPPDNMVVQH--LMDDGLACVVRKDHPEIAE 181 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 E HV +LP + GL Q +Q+ R ++ + + L + +VA +D A Sbjct: 182 SISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPEMVAVTDYCAT 241 Query: 263 IPSRFYNLFSRCWPLEKLPFP-SLNEEQIDFSIH 295 +P + +R L+ LP P L ++ + H Sbjct: 242 LPRLICHRLARDPRLKVLPAPVDLGRFPVELAWH 275 >UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n=2 Tax=Vibrionaceae RepID=A6CXP0_9VIBR Length = 310 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 11/279 (3%) Query: 11 LSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVI 70 + K E KP + DLNLL +F + Y + + +A+ L+LT SA+S ++ +L+ Sbjct: 1 MDNKKLESKPN-----KKFDLNLLRVFISTYETESVTKSAERLDLTQSAVSNALTRLKEN 55 Query: 71 FPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGAL 130 LF R G+G+ PT +A L+E + SI + ++D ++T A Sbjct: 56 VGKELFSRTGRGIKPTRYAKELYEQTHDHIMSIEKVIQGLEAFDPKKTQRTFVVYCHEAA 115 Query: 131 VLPVIYR-AIKTHYP--QLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLF 185 +L + R + T YP +++L+ P DA L + DL+ID ++ Q +L Sbjct: 116 MLRLQKRLHVCTTYPNIEIILKELPPKDARIYEDLQMEKVDLVIDVSPSDSKVFQSELLH 175 Query: 186 TDNMVLICREGNPLLSLED-DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTS 244 ++ + + + +P + D+ +HVLL N + + V E+ P R++ Sbjct: 176 SEGLTCVASKNHPRIQQGKFDKSNYMTESHVLLNIRRHNLTFVEWLVSEVLPPRKVFSQH 235 Query: 245 YNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 ++L + V+NS +A+IP +S + L+ PFP Sbjct: 236 SSLLGMLPSVSNSQAIAVIPLSVAEQYSDIFQLQTFPFP 274 >UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=Gammaproteobacteria RepID=A7K354_VIBSE Length = 314 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 15/263 (5%) Query: 14 KSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPD 73 K +E K I RNIDLNLL F +Y ++ + AA+ ++ SA+S S+ +LR++F D Sbjct: 5 KGAEVKEDI--QWRNIDLNLLVTFSYLYRYRSVSVAAEKSYVSQSAMSHSLSRLRLLFDD 62 Query: 74 PLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGAL 130 PLF RKG + PT A H+ + L+SI L + ++ + I T + Sbjct: 63 PLFERKGHKMEPTEHAHHIAPTVHHLLDSIAKDLLTKSAFQPENYAGICRIGLTDYAEFI 122 Query: 131 VLPVIYRAIKTHYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDN 188 P +Y I+ P Q+ N S+ + D+II +M + + L+T+ Sbjct: 123 FAPRLYDEIRQRAPEAQISFINVNRSNYVALTEHEKLDVIIGSMPVLDDNFESLYLYTEK 182 Query: 189 MVLICR----EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTS 244 V +C +G LSL E N L+ P+ + + Q++ E R++ S Sbjct: 183 HVCMCDKQVLKGETQLSL----EAFANIEQALVSPDGSLKTQVDQKLAEHGLSRKVTVAS 238 Query: 245 YNILTIAALVANSDMLAIIPSRF 267 N LTI L+ D++AI+P + Sbjct: 239 RNFLTIRHLLKKRDLIAIVPEKM 261 >UniRef50_Q47ZN8 Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZN8_COLP3 Length = 312 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 27/257 (10%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LRN+DLNLL+IF A+ K I +AA+ L +T A+SQ++++LR ++ DPLF RK + P Sbjct: 5 LRNVDLNLLSIFTALMHEKNISHAAENLGMTQPAVSQALKRLRSLYNDPLFERKSGKMMP 64 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGAL-----VLPVIYRAIK 140 T A ++ I++ L + L G + P L +L V Sbjct: 65 TLKADEIYPIINKILADVSSTLPDTGDF----------LPETANLNFHINILGVGNNDFL 114 Query: 141 THYPQLLLRNPP----------ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMV 190 T Q L P + DAE L + DL +D + H LF D + Sbjct: 115 TKLSQRLAHVAPNISLTVSTEMLVDAEKSLRDKEYDLHLDYLTIDEIGCHHQELFNDQLF 174 Query: 191 LICREGNPLLSLEDDRETIDNAA--HVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNIL 248 +I R+G+P L+ + + + A H +L P + N L +Q+ +R+I +TS +I Sbjct: 175 IIARKGHPNLNNKTNLLLSEYLAEKHAVLAPRKGNVYPLSLALQDFSYNREIKYTSTSIE 234 Query: 249 TIAALVANSDMLAIIPS 265 I +V+ +D++ I+P Sbjct: 235 NILEIVSATDLICIMPG 251 >UniRef50_P52679 PCP degradation transcriptional activation protein n=1 Tax=Sphingobium chlorophenolicum RepID=PCPR_SPHCR Length = 307 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 14/286 (4%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 + L L +F+A+Y H AA L++ +S+ + +LR F DPLF+R G+ PT Sbjct: 6 LPLGHLMVFDALYRHGSAGKAAHALSMPQPTLSRWLAQLRTHFDDPLFVRTRSGMEPTPL 65 Query: 89 AMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A +I++ + + E +D R IA + AL+LP +Y ++ PQ Sbjct: 66 AARAAPHIAEMIAIYRQHVRSELRFDPGTSNRNFRIAASDFGQALMLPRLYATLEETAPQ 125 Query: 146 LL-----LRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 + LR+ P+ + +L D+ + ++ LF + V + R+ +P L Sbjct: 126 VRVTGVNLRHGPLVE---ELESGSIDIAFGGFPTLSAGIKTQTLFREEYVCVMRQSHPAL 182 Query: 201 SLEDDRETIDNAAHVLLLPEEQN--FSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + D E H+++ E N + R+ E+ P I FT+ N L A + +D Sbjct: 183 THGLDLEAFRQCRHIIVTAHEFNHVHEQVEARLLELLPPESIRFTTENFLVSAVIAEETD 242 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 ++ IPSR F+ L P P + I+ ++++ +DP Sbjct: 243 VILTIPSRLARWFANRGGLTIFPVP-IELPSIEVKQYWHERYDKDP 287 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 136/284 (47%), Gaps = 7/284 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L +IDLNLL FE ++ + + AA+ L L A+S ++ +LR++F D LFIR G+ + P Sbjct: 6 LSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIGREMQP 65 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 TA A+ + IS L+ I L+ ++D + T I ++ +VLP + + Sbjct: 66 TAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLEVCRQV 125 Query: 143 YPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + R + L Q + + + R + LF ++ V +CR G+P++ Sbjct: 126 APSIDFRLIGFEKDSVGDLLEQREIHVALGLFQNPPRQTRQMPLFEEHFVGLCRRGHPVV 185 Query: 201 SLED-DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + E ET L + + + + + R++ T+ ++L + ++++SD+ Sbjct: 186 TQESMTPETFARLPQALFTLRRDDIGEIDKVLAQYNLQRRVVLTTPHLLILPTVISSSDL 245 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRD 303 + +IPSR F+ LE P E + S+ ++K + +D Sbjct: 246 VTVIPSRLLTPFAYKDTLEIFELPVKTEPWM-ISMLWSKLTDQD 288 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 11/302 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 F + ++DLNL+ + A+ + + A K L LT SA S ++ +LR +F DPLF+R +G Sbjct: 60 FHDVASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRTSRG 119 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVL-PVIYRA 138 + PTA A L E + + + ++ E + R+ ++AT G+ VL P + Sbjct: 120 LAPTARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATA-DYGSFVLAPKLLDR 178 Query: 139 IKTHYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTN--RTVQHHVLFTDNMVLICR 194 + P L LR S E QL++ D+++ + +L+ + + R Sbjct: 179 LGREAPNVDLWLRALDAS-FEEQLARGDADVVVAPARRDGLPAGIHSRLLYRERFACLVR 237 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 +G+PL+ D + + HV + P + + + ++ R++ + L +V Sbjct: 238 KGHPLVKKGIDLASWTSMRHVFIAPRGTPGGVVDETLAQLGKRRRVALAVPHFLLAPHVV 297 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 A SD++ + +R F+ PL ++ P + + +++++ RDP D +R Sbjct: 298 AGSDLVVTVGARVAEAFAEILPL-RVVDPPVKLPGFEVRMYWHERHHRDPAQQWFRDAVR 356 Query: 315 NA 316 A Sbjct: 357 GA 358 >UniRef50_A6CX36 Transcriptional regulator n=1 Tax=Vibrio shilonii AK1 RepID=A6CX36_9VIBR Length = 308 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 34/276 (12%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNL F VY H I AA+ LN+TP+++SQSI+KL + LF+R+G+G+TPT Sbjct: 11 KIDLNLFRTFATVYKHDSISRAAEELNVTPASVSQSIKKLSIELNTSLFMRRGRGITPTL 70 Query: 88 FAMHLHEYISQGLES--ILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKT---- 141 A HL E I+ L ++ + G + + P P+I+ IK+ Sbjct: 71 QAHHLIERIAPLLHEFDVITNDCLYGVHQSTPRKVVVQAPE------PIIFEHIKSTELA 124 Query: 142 ---------HYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLI 192 + +L N SD+ L D IID + + +LF D +V+I Sbjct: 125 NHTETRFRLEWLDILYSN---SDSYETLKFKHADAIIDIFQLAEPNICNDLLFEDEIVVI 181 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMF-----PDRQINFTSYNI 247 + +P + E +H++L N+ + EM P R+I T ++ Sbjct: 182 ASKNHPRVGSTISPEQFAEESHIIL-----NYQFGESSLFEMLYNSPPPKRRILSTQTSL 236 Query: 248 LTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 ++ +L + S+ L + RF + P++ LPFP Sbjct: 237 TSMLSLTSESEALCLCTRRFAEQHANRLPIKILPFP 272 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 25/279 (8%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNLL + + + + + AA L+L+ SA+S+S+ +LR DPLFIR G+ P Sbjct: 6 LARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTAHGLKP 65 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 TA A L + + L+ L L S++ +R + A S ++P + + Sbjct: 66 TAHAALLGQQLPDMLQG-LYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGPLLNN 124 Query: 143 YPQL-----LLRNPPISDAENQLSQF---------QTDLIIDNMFCTNRTVQHHVLFTDN 188 P L L +S + F Q+DLIID + + H LFTD+ Sbjct: 125 APNLRLDSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRL---PEGIAHQTLFTDH 181 Query: 189 MVLICREGNPLL-SLEDDRETID---NAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTS 244 V + R+G+P+L ++ + + +D +HV + E + L + + R ++ T Sbjct: 182 QVCLVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLSTTV 241 Query: 245 YNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 + A++ A+SD++ +PS F + + LE+LP P Sbjct: 242 PDFYGAASVCAHSDLIFTLPSSFAAHARKLYALEELPLP 280 >UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q486J0_COLP3 Length = 306 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 129/266 (48%), Gaps = 13/266 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +++ D +L+ F A+ K AAK L ++ SA+SQ + +L+ +F D LFIR +GV P Sbjct: 1 MKHSDYSLIPTFVAIVEEKSYTKAAKRLGISQSAVSQGVTRLQAVFKDTLFIRGSRGVEP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T F++ ++ ++ +E+I + + ++ I++ G +LP + + H Sbjct: 61 TQFSLDIYPTLASSVENIAFMMPEYKKFSAVKCEKQFVISSLSVFGFTILPPLSALMSQH 120 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P ++ P++ D N L DL+ID ++ V+ D + ++CR +P L Sbjct: 121 APLASVKIEPLNNHDFTNMLRSQHFDLVIDAHSNQYPQLRSKVIMEDTLCVMCRIDHPRL 180 Query: 201 SLEDDRETID------NAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 S D +ID + H L + SG + E+ R+I + + +I+ + ++ Sbjct: 181 S--GDSISIDEFLAEKHVTHSQLDQKGGYLSGKGLKEDEILNQRKIAWQAASIMEMLPVI 238 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKL 280 D +A++P R + + + L++L Sbjct: 239 ECCDYIALLPQRLVDKYRHIYQLKQL 264 >UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=B0TPA4_SHEHH Length = 301 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 135/286 (47%), Gaps = 6/286 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 T + D+NLL +F AV AA+ L+LT ++S +I + + + + LF+R G+ + Sbjct: 2 TQQKQFDVNLLRVFLAVCRTGSYTLAAEELDLTQPSVSNAINRFKAVVGEELFVRAGRNI 61 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 PTA A +L E ++ +I ++ +D +R + + ++ + +K Sbjct: 62 KPTAMANYLFEQLNDSFCNIEQTINGLEGFDPNTSERQFVVLANDVIAHMLQRRLDELVK 121 Query: 141 THYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 +++ R PP D+E L+ Q DL+ID + + +L + V + + +P Sbjct: 122 DLPIEIIFREPPDFDSEILELLTLEQADLVIDIGLPEDNRFERKLLIQEAAVCVASKEHP 181 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E HV + N + + +E+ P+R++ + ++L++ + V+ SD Sbjct: 182 RIQESISWEQFFAERHVFVKLRRFNRTAVDILSEEVLPNRKVYSSKSSMLSLFSAVSTSD 241 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 + + P + N F + + L+ LP P N + +D + + K R+P Sbjct: 242 AIGVAPRNYSNDFEKVFNLQLLPLP-FNTKPLDIELVWKKKHNRNP 286 >UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter RepID=D0RY94_ACICA Length = 311 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/271 (29%), Positives = 123/271 (45%), Gaps = 15/271 (5%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +L IDLNL +F +Y K + A++ L L+ A+S ++ +LR F DPLFIR G GV Sbjct: 9 ASLARIDLNLFRVFVTIYKEKNLTRASEQLFLSQPAVSHALARLRDHFNDPLFIRDGHGV 68 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD-----KQRTITIATTPSVGALVLPVIYRA 138 P+ A L I Q L+ + A I+ +YD + +TIA + LP I + Sbjct: 69 VPSPLAKRLWPKIEQSLQLMHQA--IQSTYDFVPARDLKHLTIAMNDEYEGIFLPSIIQH 126 Query: 139 IKTHYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 + P L L + I + ++LS + D ID ++ + D V+I R+ Sbjct: 127 LTQFNPNLQLNSVRIDRKNLRHELSTGKIDFAIDVQHSVEDSIGYECCTKDQFVVISRKQ 186 Query: 197 NPLLSLED-DRETIDNAAHVLL--LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 +PLLS D +E +A H+ + P + F Q + R I+F T L Sbjct: 187 HPLLSSTDLTKEIYLDAKHITVSSRPTGRVFEDFFLSKQGI--KRTISFRCQQYETAIRL 244 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKL-PFP 283 + +D L IP F +P K+ P P Sbjct: 245 ITQTDHLLTIPQCQIAYFKDNYPQIKVHPLP 275 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/287 (22%), Positives = 138/287 (48%), Gaps = 14/287 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L +DLNL +F+A+Y + A +++ +T A+S ++ +LR F DPLF+R QG+ P Sbjct: 3 LSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMVP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A ++ + L + ++ ++ +T I+ T A++LP +++ ++ Sbjct: 63 TPMAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQRLRRL 122 Query: 143 YPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P +++ + + +L+ + D +D T+ V+H L D V R+G+PL Sbjct: 123 APTVIIESFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMRKGHPLA 182 Query: 201 SLEDDRETIDN---AAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + E + T+D+ H+ + + + +M R+I S + L + ++ + Sbjct: 183 TKE--KFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKIALRSQHYLMASQVLQQT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 DM+ +P R F+R L P + ++ +++++ + +DP Sbjct: 241 DMVMTVPER----FARRHDLHAFNLPVNDVPPVETHLYWHESTDQDP 283 >UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B1S8_9BURK Length = 319 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 14/261 (5%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 T++ ++DLNLL +F+A+ + + A + L L+ A+S S+ +LR +F DPLF+R G Sbjct: 14 MTSVDHLDLNLLRVFQAIVEERSLTKAGERLALSQPAVSYSLGRLRTLFDDPLFVRTRAG 73 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAI 139 + PT A+ L + + L+ + AL +D RT ++ + + LP I RA+ Sbjct: 74 MQPTPVALELAGIVGKALDMVRVALRYAERFDPATSTRTFRLSLSDAGEMAYLPAICRAL 133 Query: 140 KTHYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC--RE 195 + P++ L + P+ E L + D I N+ +H +LF + V + R Sbjct: 134 RERAPRVTLSVQPMPVEAIEEALRASRLDFAIGNLPELMPRTRHQLLFEETYVCMTGRRR 193 Query: 196 GNP---LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 G P L+LE AAHV + E + L ++ R + + + + Sbjct: 194 GLPSGTTLTLEQ----FVRAAHVNVKSVEHSHHALDDALRAQGVGRNVALEVPHFVALPG 249 Query: 253 LVANSDMLAIIPSRFYNLFSR 273 ++ +D+ A +P R + +R Sbjct: 250 VLQVTDLYATLPKRLAQILNR 270 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 9/252 (3%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + DLNLL F+A++ + + AA+ LN+T A+S ++ +LR F D LFIR GV PT Sbjct: 3 KKFDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPT 62 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 + + + L + L S+D +RT I +VLP + ++ Sbjct: 63 ERCSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKA 122 Query: 144 PQLLLRNPPISDAENQLSQFQTDLIIDNMFCTN----RTVQHHVLFTDNMVLICREGNPL 199 P++ LR P+ E + DL D +F + + + + + VLI R +P Sbjct: 123 PRVDLRISPVKLGETYDALDSGDL--DFLFFSGTEPPKRINFSPMLEEKFVLIMRANHPK 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + E + + H++ + + + + E R++ TS + +IA V ++DM Sbjct: 181 MCQEMTLDAYADLTHIVFSTRGDSHTRIDDLLAENGLRRRVALTSSHHTSIAETVRDTDM 240 Query: 260 LAIIPSRFYNLF 271 +A+ PSR + + Sbjct: 241 VALSPSRLAHRY 252 >UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6V8B0_PSEA7 Length = 310 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 9/291 (3%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 +P + L +DLNL +FE VY + + AA +L+L+ SA+S ++ +LR DPLF+R Sbjct: 3 QPHEWPPLSRLDLNLFRVFEVVYRERNLTRAAALLHLSQSAVSHALARLREQLGDPLFVR 62 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVI 135 +G+GV PT A L I L + ++ S+D + RT + + LVLP Sbjct: 63 QGRGVAPTPLAERLAPGIRDALAGLQRSVARCQSFDPRHDARTFLLNMPEQLEPLVLPDF 122 Query: 136 YRAIKTHYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 ++ PQ+ +R + AE +L + D ++ T+ ++ L D + ++ Sbjct: 123 LGHLRQVAPQVEVRCSSLHWAELKTELEAGRIDAAVEVARPTDAALRRQPLLEDRLWVMA 182 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 P + E E AAHV + + + ++ R++ + L+ A L Sbjct: 183 ---GPEFAGELSAERYLAAAHVAVTSRRRGICIEDLALGQLGLTRKVRQRCQHYLSAALL 239 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 VA L + R+ L +R LP P L + ++++++ + +P Sbjct: 240 VAQGGYLLTLTRRYAELLNRGLGNRLLPMP-LALPAVALNLYWSRQADAEP 289 >UniRef50_C5AL93 Transcriptional regulator, LysR family protein n=13 Tax=Burkholderia RepID=C5AL93_BURGB Length = 331 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 14/259 (5%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +L +DLNLL +F A+ + + A L L+ A+S S+ +LR +F DPLF+R G+ Sbjct: 3 SLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHGMQ 62 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKT 141 PT + L +++ L+++ AL +D R ++ + + LP I + Sbjct: 63 PTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEVNR 122 Query: 142 HYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE---- 195 P +++++ P+ + E+ L + D I N+ +H VLF + V + R Sbjct: 123 LAPNIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTARTRHQVLFEEGYVCMMRRRVGG 182 Query: 196 -GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 P L+L + A+HVL+ E + L ++ R I + + + ++ Sbjct: 183 PARPALTLAE----FGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPHFVALPRVL 238 Query: 255 ANSDMLAIIPSRFYNLFSR 273 A +D +A +P R +F++ Sbjct: 239 AVTDFVATLPRRLAQIFAK 257 >UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteobacteria RepID=A8V9B9_9BURK Length = 308 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 5/280 (1%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ID+ LL +F Y + AA+ L L+ IS ++ KLR + DPLF+R +G+ T Sbjct: 3 EIDVKLLNVFAETYRTSSVTQAAENLGLSQPTISFNLSKLRDHYKDPLFVRTSRGMEATP 62 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 FA L+E + L S ++ S+D QR IA T ++LP + ++ P Sbjct: 63 FAQELYEQVVDLLASFSNIARLQTSFDPSEAQRIFRIAMTDISQIVLLPTLLNKLRIVAP 122 Query: 145 QLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + LR I ++ L + +L + M + LF V++ + L Sbjct: 123 RAQLRISHITTETPRMLESGEVELAVGFMPQLDAGFYQQKLFPQRFVVLAASRHVALGDS 182 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAII 263 E +A HV + P S + + ++E R + N L IA +VA +D+LA + Sbjct: 183 MSLEYYLSAGHVTVTPSGTGHSIIDRTLREQQLHRHVVLDVPNYLAIADIVAQTDLLATV 242 Query: 264 PSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRD 303 P + +L S + P P Q D H++ + +D Sbjct: 243 PQKLADLMSSSVDARRYPVP-FEIPQYDVKQHWHARTHQD 281 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 7/283 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNL I AVY I A K L+L+ A+S ++ +LR + DPLF+R G+ + T Sbjct: 7 KIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHGRKMIATQ 66 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 + + + + L G +D QR + + ++ P + + + P Sbjct: 67 LCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGFRDILESIFFPELATDLMANTP 126 Query: 145 QLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + + + +S D E L D++ID + T+ + H ++ ++ LICR+G+P+LS Sbjct: 127 NITVHSRQVSRLDMEAALESQALDIVIDVLTPTSNDIHHTLICDEHFSLICRKGHPILSD 186 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 I A H L+ ++ + + + + R+ + ++++ DML Sbjct: 187 MSLANYI-KAEHALVTFKDSAVNTVDMALAKHAVARKFALKCEHYFAATSVISRCDMLLT 245 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPI 305 +P+ + L + P+E +P P + ++++K + DP+ Sbjct: 246 MPNAYARLLKQQMPVEVVPLP-FEVPILPVHMYWHKQAEHDPL 287 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 4/244 (1%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNLL IFEAV + + AA+ LN+T A+S ++++LR I D LF++ GV+PT Sbjct: 4 QIDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPSGVSPTP 63 Query: 88 FAMHLHEYISQGLESILGALDIEG--SYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ L I +GL I AL + +T T+A AL LP + + P Sbjct: 64 KALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPILAHSAPN 123 Query: 146 LLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + +R P + +A L Q + DL + + + ++ + D + I R+ +PL Sbjct: 124 INIRIVPNTNINAAKLLEQSEIDLAMGRFYRSTVRLRVQEIIGDRYICIMRKDHPLAHKR 183 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAII 263 + A H+L+ + + ++++EM R+I T + L+A SD+++ I Sbjct: 184 LTLKQYIKADHLLVTLTGEATGLVDKQLREMDLSRRIALTVNQFTLVPELIAGSDLISAI 243 Query: 264 PSRF 267 P R Sbjct: 244 PLRM 247 >UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS8_METSB Length = 323 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +R IDLNLL +FEAV H+ ++ A++ L +T SA+S ++ +LR D LFI G+ P Sbjct: 4 IRTIDLNLLRVFEAVMRHRSVIRASRELGVTASAVSHALSRLRQALGDELFISGEAGMEP 63 Query: 86 TAFAMHLHEYISQGLESILGALDIEG--SYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 TA A+ L I GLE I A+ + D RT IA T V +LP + + Sbjct: 64 TARALELEPAIRDGLERIDHAVGAQPFVPTDAFRTFRIAATDYVAVAILPQLVGRLAEVA 123 Query: 144 PQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 PQ+ LR P +D L + + D ++ ++ + + ++ R G+PL Sbjct: 124 PQIDLRIFPFNRTDVVRHLDEGRIDFVMGWFGDLPDRMRRATIVVEKEAMVVRTGHPLTE 183 Query: 202 LEDDRETIDNAAHV---LLLPEEQNFSGL---RQRVQEMFPDR----------QINFTSY 245 +E + + H+ L+ EE G R + ++ +R ++ + Sbjct: 184 GPLTKERLFSFPHIVVELIGTEEAAVDGFFDDRGVWRRVWIERLLIEADADQGEVGRVAV 243 Query: 246 NILTIAA---LVANSDMLAIIPS 265 ++ AA +V SDM+A +PS Sbjct: 244 SVPHYAAVPPMVRVSDMVATLPS 266 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 24/256 (9%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 R +DLNLL EA+ + + + AA L+L+ A+S + +LR +F DPL I +G+TPT Sbjct: 4 RRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGMTPT 63 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 A+ L + Q L+ + + +++ T++IA T V A ++ + A++ Sbjct: 64 VKALELLVPLRQALDQVRATVTTHLNFEPATASLTVSIACTDYVQAALIKHLVVAMRREA 123 Query: 144 P--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P ++ LR + E Q+++ + DL + NM + L+ ++ VLI R G+P L Sbjct: 124 PGVRIALRILDVPQLELQMTRGEVDLAVINMNGAPPALHAQHLYDESYVLIGRRGHPSLH 183 Query: 202 LEDDRETIDNAAHVLLLPEEQNFS----------GLRQRVQEMFPDRQINFTSYNILTIA 251 + HV++ FS GLR R + ++ + L + Sbjct: 184 AGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLR---------RNVVLSASSFLPVP 234 Query: 252 ALVANSDMLAIIPSRF 267 LVA SD +A++P R Sbjct: 235 ELVAQSDCVALVPRRL 250 >UniRef50_A5KW47 Transcriptional regulator, LysR family protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KW47_9GAMM Length = 297 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 5/274 (1%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL IF VY + AA+ L+LT SAIS S+ +L+ LF R G+GV PT FA Sbjct: 6 DLNLLRIFSVVYQQGSVTKAAEHLDLTQSAISNSLNRLKSSLGQELFNRTGRGVKPTRFA 65 Query: 90 MHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLL 147 L+E + L I ++ + D + + ++ + + R + ++L Sbjct: 66 QELYEQLQFSLMEIDTVMEGVTHFNVDHPHRFIVYSHEAIFHTLRQSLDRKLAGKPIEVL 125 Query: 148 LRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED- 204 L P + + L + DL+ID Q VL + + I R +P ++LE Sbjct: 126 LVEIPSDETRIYDDLVNEKIDLVIDISRPQGAMFQSSVLREEQLCCIVRHNHPRMNLESI 185 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 ++E+ H L N + E+ P R+ ++L + V+ SD + ++P Sbjct: 186 NKESYLQERHALFDLTRLNLKFVDWITDEVLPQRKAYSEHKSLLGMIEAVSYSDAVGVVP 245 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNK 298 + + + L+ LPFP N F I NK Sbjct: 246 LSVAKRYQKAFNLDLLPFPFANHTFDSFMISLNK 279 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 21/271 (7%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR++DLNLL +F + V + + A+ L LT A+S ++++LR DPLF+R QG+ P Sbjct: 3 LRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGMEP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T +A HL E ++ + ++ AL S+D +RT T+A T +P + + Sbjct: 63 TPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLAHQ 122 Query: 143 YPQLLLRNPPISDAENQLSQFQTDLIID----------NMFCTNRTVQHHVLFTDNMVLI 192 P ++ + D+ L Q + +D F R +Q+H V + Sbjct: 123 APNCVIST--VRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQRRLLQNH------YVCL 174 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 CR+ +P+ E + HV ++ + + + R I + + Sbjct: 175 CRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGH 234 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 ++ +D+LA +P R + + L LP P Sbjct: 235 ILQRTDLLATVPIRLADCCVEPFGLSALPHP 265 >UniRef50_B4S2V4 Transcriptional regulator, LysR family protein n=2 Tax=Alteromonas macleodii RepID=B4S2V4_ALTMD Length = 311 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 136/302 (45%), Gaps = 34/302 (11%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +DLNLL +FEA++ H+ + A+ L++TPSA+S ++++ R I DPLF+++ Q + PTA Sbjct: 13 KLDLNLLKVFEALWQHRNMTRVAEALHITPSAVSHAMRRFRDILGDPLFVKEKQSMLPTA 72 Query: 88 FAMHLHEYISQGLESILGAL----DIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 L I + L I AL D + + QR + IA S+ VLP + ++ Sbjct: 73 ACERLAPAILKALNDIRKALGEFVDFDPLHSHQRFV-IAMQESLELGVLPALLSTLEKQA 131 Query: 144 PQL------LLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 P + L R+ ++D N+ L+ID + H +L D ++ + N Sbjct: 132 PNIEIVSTRLHRDTILADLTNR----NLHLVIDIGRAVAAPISHSLLRRDTYKVLMNKQN 187 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 PL D + + A H+ + + S +Q++ R + N A +VAN+ Sbjct: 188 PLAQSLDKKRYV-AARHITVSNRAKGASVEEIALQQLGVSRPSLWRCQNYRAAADVVANT 246 Query: 258 DMLAIIPSRFY------NLFSRCWPLEKLPFPSLNEEQIDFSIHYNK------FSLRDPI 305 D L +P NL S KLP+ L E + H + LRD + Sbjct: 247 DALLTLPGSVADAVNDDNLIS-----TKLPY-QLPELETHLYWHSQQEGEPGLMWLRDLM 300 Query: 306 LH 307 LH Sbjct: 301 LH 302 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 21/271 (7%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR++DLNLL +F + V + + A+ L LT A+S ++++LR DPLF+R QG+ P Sbjct: 3 LRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGMEP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T +A HL E ++ + ++ AL S+D +RT T+A T +P + + Sbjct: 63 TPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLAHQ 122 Query: 143 YPQLLLRNPPISDAENQLSQFQTDLIID----------NMFCTNRTVQHHVLFTDNMVLI 192 P ++ + D+ L Q + +D F R +Q+H V + Sbjct: 123 APNCVIST--VRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQRRLLQNHY------VCL 174 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 CR+ +P+ E + HV ++ + + + R I + + Sbjct: 175 CRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGH 234 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 ++ +D+LA +P R + + L LP P Sbjct: 235 ILQRTDLLATVPIRLADCCVEPFGLSALPHP 265 >UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=Vibrio RepID=A6ARN3_VIBHA Length = 305 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 13/250 (5%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 RNIDLNLL F +Y ++ + AA+ ++ SA+S S+ +LRV+F DPLF RKG + PT Sbjct: 8 RNIDLNLLVTFSYLYRYRSVSLAAEKSFVSQSAMSHSLSRLRVLFDDPLFERKGHKMAPT 67 Query: 87 AFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKTHY 143 A ++ + L+SI L + ++ + I T + P++Y I+ Sbjct: 68 EHAHYIAPTVHHLLDSIAKDLLTKSAFLPENYAGVCRIGLTDYAEFIFAPLLYDEIRKRA 127 Query: 144 P--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICR----EGN 197 P Q+ N S+ + D+II +M + + L+T+ V +C +G Sbjct: 128 PEAQISFINVNRSNYVAITEHDKLDVIIGSMPVLDDNFESQYLYTEKHVCLCDKRVLKGE 187 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 LS+ N L+ P+ + + +++ E R++ S N LTI L+ Sbjct: 188 TQLSI----HAFANIEQALVSPDGSLSTQVDKKLAEHGLSRKVTVASRNFLTIRNLLKQR 243 Query: 258 DMLAIIPSRF 267 +++AI+P + Sbjct: 244 ELVAIVPEKM 253 >UniRef50_A9BUT0 Transcriptional regulator, LysR family n=5 Tax=Comamonadaceae RepID=A9BUT0_DELAS Length = 309 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 28/288 (9%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++N+DLNLL +F+AVY H + AA+ L ++ A SQ++ +LR++ +PLF R GV P Sbjct: 3 IKNLDLNLLRVFDAVYRHCSVSRAAEELGMSQPAASQAVTRLRLLLGNPLFERAHAGVRP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD----KQRTITIATTPSVGALVLPVIYRAIKT 141 T A L + Q LE + A+ S++ +QR I + A LP + +A+ Sbjct: 63 TPRAERLALAVRQALEVLEVAMSEAQSFEPLQARQR-FRIHLSDIGEARFLPPLMQALHQ 121 Query: 142 HYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + L P+ + L + D+ I + RT Q VL +D+ ++ R G+P Sbjct: 122 RAPHVQLETLPMPLDGIADALDRGTLDIAIGFLPGGTRTRQ-TVLLSDHYGVLLRSGHPA 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQR------VQEMFPDRQINFTSYNILTIAAL 253 L+ + A L + +F+ +R +Q + D +I ++ + + + ++ Sbjct: 181 LA-----HLPEGAPLALATLRQLDFAAVRSHSETLRILQALRLDERIRLSAAHFMAVPSI 235 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPF----PSLNEEQIDFSIHYN 297 V +D+ I+P+ F +E+ + L + D S+H++ Sbjct: 236 VGKTDLAVIMPAEIAAGF-----VERGGYAVRDADLPDHHFDVSLHWS 278 >UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=cellular organisms RepID=A1UXD8_BURMS Length = 355 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 120/253 (47%), Gaps = 4/253 (1%) Query: 35 TIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHE 94 +F+A+ + + AA L+++ A+S ++ +LR +PLF R +G+TPTA A L+E Sbjct: 58 LVFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYE 117 Query: 95 YISQGLESILGALDIEGSY--DKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLL--RN 150 + Q L + L + + D ++ ++LP + IK+ P ++L ++ Sbjct: 118 PVRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQS 177 Query: 151 PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETID 210 QL+ DL ID + N + + L +++V+I R G+P + + Sbjct: 178 DDAGSIPAQLTTGTLDLAIDYLHFDNPELCYEPLHEEHLVVIGRAGHPAFAGGLALRGYE 237 Query: 211 NAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNL 270 + HV + P ++ S L + R ++ + LTI ALVA SD+L IP R Sbjct: 238 ESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLGTIPRRLAER 297 Query: 271 FSRCWPLEKLPFP 283 F+ + L+ P P Sbjct: 298 FADVYALQIAPLP 310 >UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae RepID=Q7MEK1_VIBVY Length = 307 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/264 (22%), Positives = 126/264 (47%), Gaps = 5/264 (1%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 ++N DLNL+ IF A++ + + AA L+++ A+S+++ +LR I+ +PLF R GV Sbjct: 6 AMKNTDLNLIPIFVAIFEEQNLSKAAARLDISQPAVSKALARLRDIYDEPLFHRSPSGVE 65 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKT 141 PT+FA+ ++ + ++ L ++ + R +IA ++P + + I+ Sbjct: 66 PTSFAVDIYPAMLTAFKNFTSTLSASSEFEAKVSNRIFSIACVSVASYELMPQLLKQIRQ 125 Query: 142 HYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 H P + L P+ D E+ L + DLIID T++ +F++ ++++C +P Sbjct: 126 HAPNISLEVHPLFTEDYESDLRLQRYDLIIDMAPRGWTTLKVEPIFSERLMVVCCADHPR 185 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 ++ HV++ S + R+I + + L + ++ S+ Sbjct: 186 IADACSVAQFLAEEHVVVSRWHARKSLMSAEDIADLAKRKIAYRASGALEMLPVIHGSEY 245 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFP 283 + ++P N F+ + ++ + P Sbjct: 246 IGMLPESTINAFAGTYNIKAVSLP 269 >UniRef50_Q085G5 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q085G5_SHEFN Length = 318 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 17/207 (8%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 Q++ L +DLNLL +F V H I AA+ L LT S++S +I +L+ LFIR G Sbjct: 12 QVYNKLPMLDLNLLRVFCTVCQHSSITRAAEQLGLTQSSVSNAINRLKHALECELFIRIG 71 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYR 137 +G+ PTA H+ + L++I L ++D +R TI +V L+ P + Sbjct: 72 RGIEPTAIGTHIFNTVQPMLDTIEQTLMGIKAFDPSTSKRVFTIYANEAVIDLLQPQLDN 131 Query: 138 AIKTHYPQLLLRNPPISDAE--NQLSQFQTDLIID------NMFCTNRTVQHHVLFTDNM 189 A+ +++LRN P+ +AE L + DL+ID MF + Q + + Sbjct: 132 ALAHLSVRVVLRNSPVFEAEQFQDLQMQKVDLVIDIVPPKLKMFSCQKVAQ------ERI 185 Query: 190 VLICREGNPLLSLEDDRETIDNAAHVL 216 V + R+G+P++ R+ A HV+ Sbjct: 186 VCVVRQGHPVIKNHLSRDDYFAAEHVM 212 >UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8Q8_MARAV Length = 312 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 13/288 (4%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 N DLNLL F A+Y+ + + A + L+L+ ++S ++ +LR +F DPLFIR Q + PT Sbjct: 4 NYDLNLLRTFHALYLEQNVTRAGERLHLSQPSVSAALGRLRELFKDPLFIRDRQRMRPTE 63 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A HL I L + G + E + +QR IA L+LP + ++ P Sbjct: 64 TADHLFPVIEAALTDLDGLITSERDFSPATEQRHFEIAANDYFEVLILPALASVLREQAP 123 Query: 145 QLLLRNPPISD--AENQLSQFQTDLIIDNMF-CTNRTVQHHVLFTDNMVLICREGNPLLS 201 + L+ +S +E + TDL + V V+ L+ E +PLL Sbjct: 124 GITLQVRRLSQDMSEAGIMSGTTDLAFGRQVDPPDNLVVREVILEGIECLVGNE-HPLLE 182 Query: 202 L-----EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 + R+ + AHVL+ P + SG+ ++++ R++ + + AL+ Sbjct: 183 RLKGNGQMTRDDFERYAHVLIQPHTRLKSGIFKQLESQNLKRKVALAVTYFMAVPALLEG 242 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 S ++A +P+ F R + + + P + + F + ++ +DP Sbjct: 243 SSLIASLPTGLCQHFRRQFAVTPVA-PPVAFDAFPFHLSWHHRYQKDP 289 >UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q081K6_SHEFN Length = 326 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 9/256 (3%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 ++ +DLNLL IFEA+Y + + A+K L +TPSA+S +I++LR++ DPLF+R+G + Sbjct: 24 AIQQLDLNLLKIFEALYSEQNMTLASKSLFITPSAVSHAIKRLRLVLNDPLFVRQGLQMQ 83 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKT 141 PTA + + L I L G +D ++T IA ++ + ++P + + + Sbjct: 84 PTAACQRMAPQLISALNRIRQVLQQCGEFDPLTTEQTFKIAIHEALESQIMPTLIKQVVK 143 Query: 142 HYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + + +S + QL+ + DL ID N + H L +D ++ Sbjct: 144 LIPHAKIASMSLSRENIARQLANGEVDLAIDVARAVNAPLAHKTLLSDPFCVLIDRRQHA 203 Query: 200 LSLEDDRETI----DNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 + LE + NA HV + +Q+ +R I + + T A +V Sbjct: 204 MHLEPSTKLTPTDYANAEHVAVSSRPIGRVMEDILLQQQGVNRHIKYRCQSYQTAAKIVI 263 Query: 256 NSDMLAIIPSRFYNLF 271 S ++ +P F Sbjct: 264 GSPLMLTLPRSIAEQF 279 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 16/276 (5%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 T R +DLNLL +F+ V + + AA+ L+LT A+S ++++LR D L R GQG+ Sbjct: 28 TNFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELVQRSGQGM 87 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT--IATTPSVGALVLPVIYRAIKT 141 PT A + + + L+ + +L + Q T T +A + A ++P + ++ Sbjct: 88 APTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETLEQ 147 Query: 142 HYPQLLLRNPPIS--DAENQLSQFQTDL-------IIDNMFCTNRT-----VQHHVLFTD 187 P + +R P++ D L + DL ++ ++ ++ QH L+ Sbjct: 148 EAPGVSMRVIPLTTRDPRRLLDEQACDLAVGYFPSVLADLTAHAQSGEPMPFQHRRLYDG 207 Query: 188 NMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNI 247 V + R+G+PL S + A H+L+ + + + + + + +RQ+ T Sbjct: 208 EYVCVMRKGHPLASGPLTLDRFCAARHMLVSFSGRPYGFIDESLASLGRERQVVLTVNQF 267 Query: 248 LTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 T +VANS++L ++P F + L P P Sbjct: 268 FTAGRVVANSNLLTVLPRHFVRVTGIAEQLVLRPLP 303 >UniRef50_B6AU51 Transcriptional regulator, LysR family, putative n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AU51_9RHOB Length = 299 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 3/260 (1%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 TLR ID L + VY + AA+ LN+ S++S +I +LR F DPLF+R+G ++ Sbjct: 4 TLRGIDFGALETLQLVYRLRSFTAAAETLNVKQSSVSYTIDRLRKSFSDPLFVRQGNQIS 63 Query: 85 PTAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTH 142 PT + L Y + L I A DI + T++I+ T A++LP + R ++ Sbjct: 64 PTDKCISLVGYAERILAEIERASQPDIFDPASLRATVSISATYLSRAVLLPKLVRDLRNE 123 Query: 143 YPQLLLR-NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + + +DA QL + D+ + + + LF D V + N L Sbjct: 124 APNITIELITGFTDANQQLLSGKADMALSPVAINESGINGKFLFDDPYVCVMDPANKLAQ 183 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + E +AAH+ + ++ R++++++ ++ N + ++ +D++ Sbjct: 184 ADMTLEQFASAAHMFIHYGQKWQPPFRKKLKDLGYIMSPMISTANPEDVGLMLPGTDLIV 243 Query: 262 IIPSRFYNLFSRCWPLEKLP 281 +PSR F+ + L P Sbjct: 244 TLPSRIAQQFAPQFQLRPCP 263 >UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A9CLK9_AGRT5 Length = 325 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 6/244 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNLL F+A+ + + A + T A+S ++ +LR + D LF+R G+ P Sbjct: 10 LHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGLQP 69 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIKTH 142 T A+ L E IS L I L +D + + +IA + G+++LP + ++ Sbjct: 70 TPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLEEK 129 Query: 143 YPQLLLRNPPIS---DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + ++ S DA + L DL + + LF + V I R+ +P+ Sbjct: 130 APGIDIKVRDYSSRDDAVSLLDSGGVDLTVGIPPTPTSRILSARLFQERFVCILRKDHPI 189 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 L D ET + H+L+ P+ + + R+ T ++ ALVA+SDM Sbjct: 190 LGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHMHVAPALVASSDM 249 Query: 260 LAII 263 +A + Sbjct: 250 VATV 253 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 7/263 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 R +DLNLL F +Y + + AA L+L A+S ++ +LR +F DPLFIR GQ + PT Sbjct: 6 RGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQVMRPT 65 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 A A +L +S E + L S+D R IT+ T V ++P++ + +K + Sbjct: 66 ARADYLATQLSPAFEQLQSVLGEPESFDPLTDSRAITLGMTDWVEIWLMPLLLKRLKANA 125 Query: 144 PQL---LLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P L L+ P D E +L DL+I ++ L + + L Sbjct: 126 PHLRINLVATDPFLDVE-RLENDSVDLVISVASPQAGWLKQRALLSSGFRALWHPQQLAL 184 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E H+L+ E+ + +++ R I +T+ + + ++ ++ + Sbjct: 185 PSPVPLEVYSQQRHLLVTYRERAHGIVDDMLEKQGMTRTIYYTTPHFSALPGILQHTPSV 244 Query: 261 AIIPSRFYNLFSRCWPLEKLPFP 283 A +P + L+ + + L P P Sbjct: 245 ATVPEKLATLWCQHYGLNDSPVP 267 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 129/266 (48%), Gaps = 10/266 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +R +DLNLL +F+A+ + + A + L+ A+S ++ KLR +F DPLF+R G+G+ P Sbjct: 3 IRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGMEP 62 Query: 86 TAFAMHLHEYISQGLE----SILGALDIEGSYDKQRTITIATTPSVGALV-LPVIYRAIK 140 T A L E +++ L+ IL + + + R + + +G +V LP + + Sbjct: 63 TPRAQALGEPVARLLDLVQTEILPMPEFRPA-ESSRNFVLCMS-DIGEMVFLPRLESFLD 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTN-RTVQHHVLFTDNMVLICREGN 197 P + ++ +S + E L+ DL I N +++ L+ + V I R+ + Sbjct: 121 KAAPHVSIKTVALSMPELEEGLASGDVDLAIGYFPGLNSESLKRKALYRHSYVCIARDDH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P + + AAHV++ PE + L + + + + F++ + + +VA S Sbjct: 181 PEIGDTLSLDQYRAAAHVMVHPEGREQDVLARTHERLGIRVNVRFSTPRFIGVPFVVAGS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFP 283 DM+A +P F+ ++ LP P Sbjct: 241 DMIAAVPQAVGRRFAEFVNVKLLPLP 266 >UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS61_DESAD Length = 310 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 6/296 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 T N+DLNLL I + ++ + + A L +T SA+S ++ KLR F D LF+R+G + Sbjct: 4 TNSSNLDLNLLVILDTIFTERSLTLAGNKLFMTQSAVSHALSKLRHHFDDRLFVRRGNIM 63 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 PT +H+ I+ L++I +L G +D +RT ++ + + L+LP I R I Sbjct: 64 EPTPLCKTIHQNIAPSLKAINQSLADRGEFDPASSKRTFSLGLSDYLCKLLLPEILRLID 123 Query: 141 THYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + + +R E L + D+ + V LF D V + R +P Sbjct: 124 SRALGISIRIMQTTYEKREEMLQSGKLDVFLGCPRNYGAGVLKEKLFEDREVCVVRNDHP 183 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + E + L E L + R+I I +LV NS+ Sbjct: 184 IKGEVMNEEEMAENEFAALSLSESGLGFLEDYLYRKGVQRKIKIVLQQETVIPSLVENSN 243 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 ++ I R +++ L + P N E + S H++ + DP + VI+ Sbjct: 244 LVGSIAQRLAEMYAAKGRLRIVHMPLENTE-FEVSQHWHSLNDNDPAQQWIRSVIK 298 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 5/179 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR++DLNLL + EA+Y + + A++VL++T A+S ++ +LR+ F DPLF+R+G+GV P Sbjct: 3 LRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGVKP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTH 142 TA L I + L+ + L+ ++ R+ I++ + ++ P I R ++ Sbjct: 63 TAMTEALMPAIRESLDKLRNGLEPRSVFEPSRSTRVFNISSRDASAHILAPPIARRLEVQ 122 Query: 143 YP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P ++ P S ++L+ + DL ID ++ +L + V +PL Sbjct: 123 APGVRISWSQPQRSAIASELASGRLDLAIDVQDLRGADLERVLLSSTKYVCALASDHPL 181 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 8/294 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL +F A+ + + A + L LT A+S ++++LR +F DPLF+R G+ PT A Sbjct: 10 DLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTPTGMVPTDAA 69 Query: 90 MHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAI--KTHYP 144 + LH ++Q I A+ +D QR ++ + LP + + Sbjct: 70 LRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFLPPLLSMLDRSARGI 129 Query: 145 QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 +L + N + + + + DL + + + LF D V + R G+PL + Sbjct: 130 RLEIANVSVDSVSSAMRSGEIDLALGYVPGLDTGCVSKTLFVDEHVCVVRAGHPLRKQKP 189 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 +E + N +V + Q ++E+ R I + + +V ++D+ I P Sbjct: 190 TKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLPHFVVAPEIVQHTDLAMIFP 249 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIH-YNKFSLRDPILHGVIDVIRNAF 317 F+R LP P I+ +H +++FS DP + ++D I + F Sbjct: 250 RSIAQRFNRNKAFRILPLP-FALPPIEIQVHSHSQFSA-DPGIAWLLDAIYDMF 301 >UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=Ralstonia solanacearum RepID=A3RSL5_RALSO Length = 304 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 10/247 (4%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + +DLNLL +F+A+Y + + AAK N+T A+S ++ +LR +F DPLF+ G+ PT Sbjct: 4 KRLDLNLLGVFQAIYQTRNVTLAAKRHNITQPAMSNALARLREVFADPLFVPSPYGMRPT 63 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 +A L I + L + AL + +D R + T LP + ++ Sbjct: 64 PYAQQLAVPIDRALREVEQALAMSKGFDPASSDREFRMHLTDFAQVAFLPALLERLRALA 123 Query: 144 PQLLLRNPPISDAE--NQLSQFQTDLIIDNMF-CTNRTVQHHVLFTDNMVLICREGNPLL 200 P++++R +++ L + + D M + V + LF D ++ R G+PL Sbjct: 124 PRVVIRVEALAEETILPALDEGRLDFAFGRMSKAAGQGVGRYTLFKDRYAVLMRAGHPLA 183 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 R+ A L+ + + +M + S+ L ++ +V SD++ Sbjct: 184 GHALSRKDFAAAGQALIC--TSGHRAIEDVLVKMGAHIALRLPSF--LVVSRIVETSDLM 239 Query: 261 AIIPSRF 267 I+P+R Sbjct: 240 VIVPARL 246 >UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K8D7_AZOSB Length = 298 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 23/290 (7%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++++DLNLL IFEAVY+ + + AA L LT ++S + +LR++F DPLF+R GV P Sbjct: 3 IQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGVEP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A + + Q L + LD ++ RT + + + LP + RA+ Sbjct: 63 TVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALLER 122 Query: 143 YPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQ-HHVLFTDNMVLICREGNPL 199 P + + + E L Q DL I + ++ + H+L + V+ R P Sbjct: 123 APGVRIETRQLGGVELAAALDSGQIDLAIGYLPVLDQGFECRHLLADEYAVIAPRHLIPS 182 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFS-----GLRQRVQEMFPDRQINFTSYNILTIAALV 254 D+ + + + Q + GL RV+ P + + + A++ Sbjct: 183 GGKGDN--AFNGLDFIAVTSHPQTLAILRECGLLDRVKLWVP---------HFMVVPAIL 231 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 A + A+ P + FS + P P+L + +D ++++N+ DP Sbjct: 232 AERNFAAVAPREVVHAFSPRSRVRSFPLPAL-QRGMDVNLYWNRRYTGDP 280 >UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibrionales RepID=B7VJC4_VIBSL Length = 308 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 9/245 (3%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + IDLNLL +A+Y + AA+ ++ SA+S S+Q+LR +F DPLF R G + T Sbjct: 7 KGIDLNLLIALQALYKTNSVSKAAERCYVSQSAMSHSLQRLRKLFDDPLFERVGSKMEAT 66 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHY 143 A+ L + L +I + + S+D + T I T + P ++ IK Sbjct: 67 DRAIELSSTVEALLNTIQSEVLLSKSFDAATYKGTWKIGLTDYAEQMFAPALFDLIKQSS 126 Query: 144 P--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P Q++L N S+ + + D+ I + ++ + L+T+ V C ++S Sbjct: 127 PNSQVVLFNVNRSNYQQVFEDAKLDMAIGSFGEVSKQYRTTHLYTEQHV--CLFDKSVVS 184 Query: 202 LED--DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 +E E H L+ P +G+ +R+ E+ R++ S N LT+ L+ ++ Sbjct: 185 IEGPISLEQFVAVEHALVSPAGSLKTGVDKRLAELGFSRKVAICSSNFLTVKRLIRGREL 244 Query: 260 LAIIP 264 L I+P Sbjct: 245 LCIVP 249 >UniRef50_A4Z170 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z170_BRASO Length = 313 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/297 (23%), Positives = 140/297 (47%), Gaps = 8/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +L ++DLNLL +FEA+ + + AA + L + S+++ +LR +F DPLF+R G+ Sbjct: 8 SLAHVDLNLLVLFEALLSERNVTRAAVRVGLAQPSASKALDRLRHLFGDPLFLRAPGGMR 67 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKT 141 PT A+ L I+ LE + + E +D + ++ +A + + ++LP + + Sbjct: 68 PTPRALELAPEIALVLERVRALVAAELPFDPATARGSLRLAMSDAAEFVLLPGLVAQLAG 127 Query: 142 HYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + L+ P+ +L + + D ++ + + LF + V + R +P Sbjct: 128 TAPGVTLQARPLDKDRVFAELDEGRLDAVVGVFRELPKRFRSAPLFEERFVCLARADHPR 187 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 L+ ET H+L+ + + ++ + R++ T L + ++A SD Sbjct: 188 LATGLTLETYVELPHLLVTLRDDRKGAVDDALEAIGLHRRVAATLTRFLALPPVLAFSDA 247 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +A +PSRF + P +L P L + + + + R+P++ + +IR+A Sbjct: 248 IATVPSRFAAASA---PNCRLHEPPLALPRWTEQLVWRAGAEREPMIAWGLQLIRSA 301 >UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W028_MARMS Length = 309 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 22/272 (8%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +DLNLL + + + I A+ LN++PSA+S S+ +LR F D L + G+ + Sbjct: 3 FKKLDLNLLVALDTLLTEQSITKGAEKLNMSPSALSNSLSRLRDYFEDDLLTQIGRRMVI 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLP----VIYRA 138 T +L + L +I + ++ S++ Q R +I + +++P ++ + Sbjct: 63 TPLGENLKVSVRNALNNIESTILVQPSFEPQTTDRIFSIFCSDYTQTVLVPHALEIVGKQ 122 Query: 139 IKTHYPQLLLR---NPPISDAENQLSQFQTDLII--DNMFCTNRTVQHHVLFTDNMVLIC 193 T QLL + NP QL Q + DL+I + T +L+ + V + Sbjct: 123 KSTARFQLLAQVANNP-----HEQLEQGKADLLIIPSDFMSTEHPCD--ILYEEEFVCVV 175 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPE--EQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 + + + S E E A HVL+ PE +++F G Q+ R + T+++ ++ Sbjct: 176 WKHSKIASGELTAEKYAAAGHVLMRPEATKKDFFGTL-FTQKYGIKRHVIATTFSFASLP 234 Query: 252 ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 ALV S+ +A I +R ++ WPL+ LP P Sbjct: 235 ALVIGSENIATIHARLATKMAKVWPLKILPLP 266 >UniRef50_Q7MEL0 Transcriptional regulator n=18 Tax=Gammaproteobacteria RepID=Q7MEL0_VIBVY Length = 289 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/276 (23%), Positives = 123/276 (44%), Gaps = 14/276 (5%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNL+ F V ++ AA L LT A+S SI++L + LF++KG+G+ PTA Sbjct: 5 MDLNLIQTFLLVAEYQSYTKAADHLGLTQPAVSASIKRLEKVVNKQLFVKKGRGIEPTAS 64 Query: 89 AMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLL 148 A L Q + + A+ ++ + + ++ + P+ + P+ L Sbjct: 65 AYQLIPKFHQAISIVDNAISERSAFQ------VCCSETLLHSLTPIEHTVFHESPPEKYL 118 Query: 149 RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRET 208 Q+ Q + DLIID + + + + + V+ICR+G+P + + + Sbjct: 119 LF-------EQIRQQKMDLIIDTVITKDSSFVIENAYQEPAVVICRQGHPRIQGQLSKAQ 171 Query: 209 IDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFY 268 +H L + N +G Q E +R + + ++ ++A VA D L ++ F Sbjct: 172 FYQESHCLFSGKWNNTTGFEQLANEPIEERIVEIVTTSLSSMALYVAQRDCLGVVSRSFA 231 Query: 269 NLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 +S+ L+ L P + I + Y+K L +P Sbjct: 232 LKWSKALKLQILDCP-IAISLIPYKFIYHKRELNNP 266 >UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZA2_VARPS Length = 317 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 22/274 (8%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +IDLNL +F+A+Y + + A L +T SA+S +++++R F D LF+R G+ PT Sbjct: 5 SIDLNLFLVFQAIYATRSVTLAGDRLGMTQSAVSNALKRMRERFNDALFVRSADGMVPTP 64 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVL-PVIYRAIKTHY 143 A L I +G+ ++ A+D +++ + R IA +G LV+ P + + Sbjct: 65 VAERLIAPIEEGIACLVQAVDQGRTFEPETSSRIFRIAVN-DIGQLVMVPELISVARGIA 123 Query: 144 PQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + +S AE ++ Q D+ + + + LF + V++ + +PL + Sbjct: 124 PGVRFETVDVSVAEARQRMLHGQIDVALGSWEAMGPSFYQQRLFDETFVVLMSKASPLGT 183 Query: 202 LEDDRETIDN---AAHVLLLPEEQNFSGLRQRVQE--MFPDRQINFTSYNILTIAALVAN 256 E R +D+ A H+ P+ S L+Q ++ R++ T+ + L + ++VA Sbjct: 184 RE--RIELDDYLAAEHIAYRPQGTTDSQLQQTLERAGALDRRRVVLTAAHSLGLTSIVAT 241 Query: 257 SDMLAIIPSRF--------YNLFSRCWPLEKLPF 282 S +L P+R +L S P E PF Sbjct: 242 SGLLLTAPARLAKAMVASRADLHSVDAPFEVRPF 275 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 74/284 (26%), Positives = 127/284 (44%), Gaps = 23/284 (8%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR DLNLL + + + + A+ L L+ A+S ++ +LR DP+ +R G + P Sbjct: 3 LRGFDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQMVP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVL-PVIYRAIKT 141 T A L E + + +I L +D RT IAT GA VL P + ++ Sbjct: 63 TPRAEQLVEPVQAIVSAIEQTLADPQPFDYSSISRTFRIATN-DYGAFVLVPFLMNRMQK 121 Query: 142 HYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P L I+ D E L + + DL+I + + LF++ + R+ +P + Sbjct: 122 IAPHLTFEIWDIALDVETALREGEIDLVIADAWTLRNCKCRKTLFSETFTCLVRQNHPRV 181 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRV--------QEMFPDRQINFTSYNILTIAA 252 D + T+D+ L E+ R RV + RQ+ T +IL I A Sbjct: 182 ---DTQLTMDD-----YLQEKHALVSARGRVTGNVDIALSQQNKQRQVQITLPHILAIPA 233 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHY 296 ++A +DM+ + +R N F+ + L+ P P + + D ++ + Sbjct: 234 MMAATDMIVTVATRIANRFAVDYHLQTFP-PPITLDGFDIAMAW 276 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 138/302 (45%), Gaps = 24/302 (7%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL +FEAVY + + A+K LNLT A+S ++++LR F DPLFIR G+ PT Sbjct: 1 MDLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTDL 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L + LE +L + + S+D R I+ + G LVLP + + + P Sbjct: 61 AEQLAGRVLDALE-MLRSFESRESFDPAGLSRDFRISISDYNGMLVLPRLLKELAEQAPG 119 Query: 146 LLLRNPPISDAE--NQLSQFQTDLIID-NMFCTNRTVQHHVLFTDNMVLICR-----EGN 197 + + I A LS Q DL++ N + + L++D+ V + EG Sbjct: 120 VSITTSQIQRAHVSEHLSTGQVDLVLAPKQDVAN--LSYEPLYSDDYVGVASAHYGPEGG 177 Query: 198 PLLSLED--DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +SLE+ RE H+L E S + + ++ R++ S ++ TI ++ Sbjct: 178 Q-MSLEEYCQRE------HLLFSLEGYGRSTVDVALSKLGKKRKVVLRSSHVHTIPHVLE 230 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 S +A +P + + + L P + + +H++ DP + +I+ Sbjct: 231 GSAFIATLPRLITLDYLKRFELTSFSLP-FELKGHEVGLHWHARQHHDPAHEWLRGLIKE 289 Query: 316 AF 317 F Sbjct: 290 LF 291 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 19/290 (6%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 R +DLNLL +F+ V + + AA+ L +T A+S ++++LR + D L R+G GV PT Sbjct: 7 RTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRGHGVEPT 66 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 A+ L + L + L G +D Q T +A + GA ++P + ++ Sbjct: 67 PRALALWPAVRHALAQLQETLS-PGRFDPASAQTTFVLAMADATGATLIPPLIEIVEREA 125 Query: 144 PQLLLRNPPIS--DAENQLSQFQTDLIIDNMFC----------TNRTVQHHV--LFTDNM 189 P + LR P++ D L + D+ + ++ V H L+ Sbjct: 126 PGVSLRVVPLTTRDPRRLLDEESADMAVGYFPAVLADLTARAQSDNVVAHESTRLYDSQY 185 Query: 190 VLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 V + R +PL ++ + A H+L+ + F + + + +R+I T T Sbjct: 186 VCVMRADHPLAAVPMTLDLYCAARHLLVSFSGKPFGFIDGALAALGRERRIVLTVNQFFT 245 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP-SLNEEQIDFSIHYNK 298 +VA +D+L ++P F + S L P P +L +D H + Sbjct: 246 AGRVVATTDLLTVLPRHFVGVASVRDELVWRPLPMTLPPVHVDALWHRRR 295 >UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=Burkholderia RepID=A1UYG7_BURMS Length = 439 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 22/268 (8%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNL + +AVYV GI AA+ L+LT A++ ++ +LR F DPLF+R+G V PT Sbjct: 138 LDLNLFRVLDAVYVQGGISAAARALHLTQPAVTHALNRLRAHFGDPLFVRQGNKVVPTER 197 Query: 89 AMHLHEYISQGLESILGALDIE-----GSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 + + + L+ + A + G+ D + + + ++ LP + + Sbjct: 198 TREVIADVQRHLKGLQDAARAQTRFSPGALDM--SFVVGVRDVLESIALPQLVETLAREA 255 Query: 144 P--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTN-RTVQHHVLFTDNMVLICREGNPLL 200 P +L+ R P++D +L DL I+ R V HV D +V+ R + L Sbjct: 256 PGVRLVSRRVPVADIGRELGSGNLDLAIERRVPAGPRIVAEHVA-DDTLVVAMRRDHALA 314 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFS-----GLRQRVQEMFPDRQINFTSYNILTIAALVA 255 R A HV + P + + G R R+I + +VA Sbjct: 315 GAPLRRADYFAAGHVTVSPLGEPHTLDVLLGADGRF------RRIQLVCQHYFAACQIVA 368 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 + D+L +P + +R PL P P Sbjct: 369 SGDLLLTLPRSYALRMTRLLPLAAQPLP 396 >UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=Proteobacteria RepID=C4I668_BURPS Length = 297 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 124/275 (45%), Gaps = 12/275 (4%) Query: 37 FEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYI 96 +A+ + AA LNL+ ++S + KLR IF DPL + +G+ PTA A L E + Sbjct: 15 LDALLSEHNVTRAAARLNLSQPSVSIHLAKLRDIFGDPLLLPGPRGMRPTARADELREPL 74 Query: 97 SQGLESILGALDIEGSYDKQRTI----TIATTPSVGALVLPVI--YRAIKTHYPQLLLRN 150 + LE++ A+ +D + A+ S +VLP + RA ++ Sbjct: 75 RRALETLGRAVSPGAPFDPAASAHTWRVAASDYSESTVVLPALNGLRAAAPGTRLAVVET 134 Query: 151 PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETID 210 P S Q Q DL C ++H LFT+ VL+ R G+P L Sbjct: 135 VP-SRIAKQAEQGDIDLAFHITECAPGNLRHRALFTERYVLVGRAGHPRLKRRPTLAQFC 193 Query: 211 NAAHVLLLPEEQNF-SGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYN 269 HV++ P+ F G Q + ++ R++ + + L + + VANSD++A++PSR Sbjct: 194 KLDHVIVSPDGGGFQGGTDQALAKLGLARRVVLSVPHFLFMMSAVANSDLVAMMPSRLVR 253 Query: 270 LFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 +E P ++ ++ +++ S RDP Sbjct: 254 DSRALQVVE----PPVDVPGFRMAMLWHERSHRDP 284 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 5/262 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L DLNLL F+A+ +G+ A + L +T +A+S ++++LR F DPLFI+ G + P Sbjct: 9 LNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGARMEP 68 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTH 142 T AM L I L+ + ALD + S+D + + LV P + ++ + Sbjct: 69 TPRAMELSGMIEAALKQVHVALDND-SFDPANSHYVFRVGMVDYTVPLVFPALLDHLEKY 127 Query: 143 YPQLLLRNPPISDAENQ-LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P +L D E + L + DL++ + R ++ V+ V I R G+PL+ Sbjct: 128 APNCILEVVNTGDFEGEMLESGEVDLVLSRLDQAPRGLKSRVVGEIPFVCIYRPGHPLIK 187 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 E A HV P + ++ + +R + + + LVA +D++A Sbjct: 188 EPMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDSFGMVPTLVAETDLIA 247 Query: 262 IIPSRFYNLFSRCWPLEKLPFP 283 + ++ + L+ P P Sbjct: 248 AVTHTSAHVIAPAMGLKVQPLP 269 >UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJR3_SORC5 Length = 306 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 4/262 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR +DLNLLT+ +AV + + AA+ L +T A+S ++ +LR++F D L +R+G+ + P Sbjct: 9 LRAVDLNLLTVLDAVLTERNVTRAAERLGMTQPAVSSALNRLRLLFNDDLIVRRGKEMAP 68 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD--KQRTITIATTPSVGALVLPVIYRAIKTHY 143 T A+ L I + L+ I +L G++D RT + T AL+LP + ++ Sbjct: 69 TPRALALAGPIRKALDLIQASLAHTGAFDCTASRTFRLGITDIGEALLLPRFLQWLEQLG 128 Query: 144 PQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 ++ L P + +N++ + +L++D++ + + V + R+ +P + Sbjct: 129 ARVRLDFCREPGTSLQNEMRLGKIELVLDHIAIPGEEFRRTRVLDLEFVTLVRQDHPTVG 188 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + HV++ P E + Q + R + L++ +V+ S+++ Sbjct: 189 PSLTLDEYMALEHVIIEPREGQTNLAEQIQAAVGRARCVRVQVPRYLSMPFIVSQSNLVC 248 Query: 262 IIPSRFYNLFSRCWPLEKLPFP 283 +P LF + +P+ + P Sbjct: 249 TLPLPLARLFEQHFPVRVVSCP 270 >UniRef50_A9R140 Substrate-binding transcriptional regulator, LysR family n=34 Tax=Enterobacteriaceae RepID=A9R140_YERPG Length = 322 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 68/273 (24%), Positives = 132/273 (48%), Gaps = 7/273 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 K I LR++DLNLLT+F+AV + + AA+ L ++ A+S ++ +L+V+F D LF+R Sbjct: 19 KESIDVHLRSVDLNLLTVFDAVMQMQNVTRAAQSLGMSQPAVSNAVARLKVMFNDELFVR 78 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEG--SYDKQRTITIATTPSVGALVLPVIY 136 G+G+ PTA A L + Q L+ + L G + + +R ++ + + I Sbjct: 79 YGRGIQPTARARQLFGPVRQALQLVQNELPGAGFEAKNSERLFNLSICSPLDVRLAAQIV 138 Query: 137 RAIKTHYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICR 194 + +K P QL++++ + E+QL +T+ +I LF D +VL Sbjct: 139 QRVKQSAPNVQLVIKSYLNDNIEHQLRYQETEFVIGYTEFDRPDFHRIPLFKDELVLAVS 198 Query: 195 EGNPLLSLEDDRETIDNAAH-VLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 + +P ++ + + +H V+ L ++ +FS + I + S ++ ++ + Sbjct: 199 KDHPRINDSITENQLLSESHAVVSLDKKGSFS--EPYYDSTTSTQSIAYESTDMNSVLNI 256 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLN 286 V+ + +AI P +S L+ + P N Sbjct: 257 VSQTYFVAIAPRWLVKTYSEALNLKLISLPWEN 289 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 76/300 (25%), Positives = 143/300 (47%), Gaps = 12/300 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L +IDLNLL +F+ + + AA LN++ A+S+S+ +LR +F DPLFIR G++ Sbjct: 21 LSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLSA 80 Query: 86 TAFAMHLHEYIS---QGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTH 142 TA L ++ +GLES++ + K+R I ++TT VLP I + Sbjct: 81 TAKTQDLAPLLADTLKGLESLIQPSEFTPQSSKRRFI-LSTTDFGTLTVLPKILDKFRQK 139 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCT-NRTVQHHVLFTDNMVLICREGNPLL 200 P +L + D +L Q D+ + + ++ L +D MV + R+ +P + Sbjct: 140 APDAILDVKSWNEDMVAELDQTNIDVAVAVLSKEPPAGIRAMRLKSDRMVCLARKNHPRI 199 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + E+ +HV ++ + + + + +++M R ++ N + A +V +SD+L Sbjct: 200 EGKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPAARVVMDSDLL 259 Query: 261 AIIPSRFYNLFSRCWP---LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +P F + + +LPF S + D+S+ +++ D ++R AF Sbjct: 260 LTVPKLFAEDMAATVSEIVVHELPFAS---REFDYSMIWHERFQHDAAHVWFRGLLRQAF 316 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 5/250 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ++DLNLL +FE+++ + + + L L+ A+S+ + +LR + D LF+R +GV PTA Sbjct: 13 HLDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDELFVRHRRGVEPTA 72 Query: 88 FAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 FA L E +S L + ++ + + R +A + LP + + H PQ Sbjct: 73 FAQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRVALSDIGERYFLPRLAAWLADHAPQ 132 Query: 146 LLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + + S E L+ + DL + + + V LF + V I R +P + Sbjct: 133 VSIDTVSASREELLTGLASGEIDLAVGFLPGLGKQVHEKRLFQEKFVYIARRDHPGIDGR 192 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQ-INFTSYNILTIAALVANSDMLAI 262 + HV+ P + ++V R + + L+I +VA+SD++A+ Sbjct: 193 LQASQLRALPHVVGSPHGTQHAAAVEKVLTGPRVRAVVAMRVGSFLSIGPIVADSDLVAV 252 Query: 263 IPSRFYNLFS 272 +PS L S Sbjct: 253 VPSNLAALVS 262 >UniRef50_Q2CK92 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CK92_9RHOB Length = 309 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 22/256 (8%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR ID +L IF ++ H+ A+ + LT A+S ++++LR ++ DPLF+R+ G+ P Sbjct: 9 LRLIDTTVLLIFLSLMRHRKATEVAREMGLTQPAVSHALKRLRTLYEDPLFLRRAHGLEP 68 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGAL------VLPVIYRAI 139 TA A L I + + + L+ +D T AT +GA V+P + + Sbjct: 69 TALAHELEPKIRRIVRLLSQTLENPDQFDPAST---ATDLRIGAFDYELTTVIPKLAAEM 125 Query: 140 KTHYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHV---LFTDNMVLICR 194 +T P + + P+ ++A + L + DL I R+ V L+++ VL R Sbjct: 126 RTLSPSINVHAYPLVYTEALDALVHGRLDLAIGYFDIPLRSEATFVVEDLYSERYVLAGR 185 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFP----DRQINFTSYNILTI 250 G+PLLS E + A H+L+ P +R RV E R I ++ Sbjct: 186 RGHPLLSDNPTLEEMAQADHLLVSPH----GLIRNRVDEALRMQGYQRNIRTVVPSLFAA 241 Query: 251 AALVANSDMLAIIPSR 266 +++ NS+++ +P R Sbjct: 242 LSIIENSELVMTLPER 257 >UniRef50_C4LDS5 Transcriptional regulator, LysR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LDS5_TOLAT Length = 317 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 89/315 (28%), Positives = 144/315 (45%), Gaps = 35/315 (11%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVN-AAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 F R+ DLNLL + EA++ +G V+ AA + L+ SA+S ++ +LR + DPLF+++G Sbjct: 13 FQQFRHWDLNLLVVLEALFCEQGNVSRAALRVGLSQSAMSHALNRLREMLDDPLFVKQGH 72 Query: 82 GVTPTAFAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAI 139 + PT+ A+ L I+ LE+I G L + Q+ I +A + LVLP + + Sbjct: 73 RMHPTSRAIALAPVIAGWLENIRGQLKPPVFDPATVQQEINVAIPEHLERLVLPALLGFL 132 Query: 140 KTHYPQLLL--RNPPISDAENQLSQFQTDL-IIDNMFCTNRTVQHHVLFTDNMVLIC--- 193 + P L L R P+S +Q + D+ II N + + QH +L V + Sbjct: 133 RQQAPGLHLHSRPVPMSQLNEAFAQGRIDMAIIGNDWEPKASYQHCLLTESRFVYVYDAR 192 Query: 194 ----REGNPLLSLEDDRETIDNAAHVLLLPEEQNFS--GLRQRVQEMFPDRQINFTSYNI 247 E L L + N +H + +F+ GL +R+ TS I Sbjct: 193 QLHFAESVSLAELAAVPQLASNYSHKTATIIDNHFTVHGLTRRIMA---------TSGGI 243 Query: 248 LTIAALVANSDMLAIIPSRF---YNLFSRCWPLEKLPFPSLNEEQIDFSIH--YNKFSLR 302 I A++A ML+I+P + LF L K PF + + ++H ++K Sbjct: 244 TAIPAILAECPMLSILPEIMIADHPLFDS---LVKRPF---EPDSVRATLHLVWHKLHEH 297 Query: 303 DPILHGVIDVIRNAF 317 D + H V D I F Sbjct: 298 DLVQHFVRDWIIRHF 312 >UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FW21_SORC5 Length = 333 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 6/246 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +R+I+LNLL EA+ V + AA+ +++ SA+S S+ +LR +F DPL + G+G+TP Sbjct: 22 IRSINLNLLPALEALLVEGSVSGAARRAHVSQSAMSHSLARLRELFGDPLLVPLGRGLTP 81 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L + E + AL +D + RT +AT LP + + H Sbjct: 82 TPRALQLRAALPAAFEHLRRALASPEPFDPRTSARTFRVATIDYFELTTLPDVLDHLGEH 141 Query: 143 YPQLLL---RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + L R P L L + ++ L+ D ++ R+G+P Sbjct: 142 APFVRLEIERFSPDVTPALVLGDIDLALFGASQPVPAAGLRRAPLYQDPFAVMARKGHPA 201 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + D +T HVL+ E + + + + R++ + ++ V +SD+ Sbjct: 202 IKRRLDLDTYVALGHVLVSVEGHRGGAVDRALARLGKTRRVALRLPHFMSAPLAVRSSDL 261 Query: 260 LAIIPS 265 L IPS Sbjct: 262 LCTIPS 267 >UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A0KG94_AERHH Length = 318 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 26/302 (8%) Query: 37 FEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYI 96 F+A+ + AA+ L ++ A+S ++ +LR F DPL +R QG+ PT A LH + Sbjct: 15 FDALMAQGSVTRAAETLFISQPAMSHALNRLRTFFGDPLLVRTPQGMLPTPRAQRLHLGV 74 Query: 97 SQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPI 153 Q L + L E ++ +R + TT V +++P + + +K P + + + Sbjct: 75 QQALRLLEQQLSDEEVFEPSQSKRRFVLCTTDYVECVLIPPLIQRLKRLAPAVTIEIRIL 134 Query: 154 SDA--ENQLSQFQTDLII--DNMFCTNRTVQHHVLFTDNMVLICRE----GNPLLSLEDD 205 D E +L+ + DL++ D + T+ + + R P L+ D Sbjct: 135 RDTLPEAELASGEIDLVLGFDEYMQVPGYLGKETWLTEPLAGLVRADLPMAAPALAESGD 194 Query: 206 RETI----------DNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 I HV P + + L + ++ + R I+ S + ++ AA+V+ Sbjct: 195 EPAILAERISLAQLIEMPHVFHSPLGTSEASLDRYLKTLGFSRTISVNSQSYMSAAAIVS 254 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIH--YNKFSLRDPILHGVIDVI 313 SD L ++PS L + WPL+ LP P E+ D+ ++ ++ + P L + D++ Sbjct: 255 QSDHLLVLPSMVAELLASHWPLKSLPLP---EDVPDYHLNCVWHPVHAQQPALVWLKDLM 311 Query: 314 RN 315 + Sbjct: 312 KE 313 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/297 (24%), Positives = 137/297 (46%), Gaps = 32/297 (10%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L DLNLL F+ + +G+ A + L +T +A+S ++++LR +F DPLF++ G + P Sbjct: 10 LNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGSSMEP 69 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L ++ LE + AL+ EG +D + A+++P + R + Sbjct: 70 TPRAIELSTPVALALEEVRKALNQEG-FDPMMASENFRLGMIDYASAMLMPGLVRHMSQV 128 Query: 143 YPQLLLRNPPISDAEN--QLSQFQTDLIIDNM------FCTNRTVQHHVLFTDNMVLICR 194 P+ ++ + E L + DL+ C NR LF+ V + Sbjct: 129 APRAKMQVVDVGGDEEVANLERGAVDLVFSRFQWVPPKVCINR------LFSMEYVAVFC 182 Query: 195 EGNPLLSLEDDRETID---NAAHVLLLPEEQNFSGLRQRVQEMFPDRQI--NFTSYNILT 249 +P +E ++D + HV P + + + + + EM R I S+ +L Sbjct: 183 PNHP--GVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEKRNIIGKLASFGMLP 240 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPL--EKLPFPSLNEEQIDFSIHYNKFSLRDP 304 A++A+S ++A++P + +R L EKLPF + + ++ ++ + RDP Sbjct: 241 --AMLASSHVMAVMPEGAAKVVARPLGLRVEKLPFKT---PLLRMALAWHPRTDRDP 292 >UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Burkholderiales RepID=Q2KYC5_BORA1 Length = 306 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 30/281 (10%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 K + LR +DLNLL +F+ + + I A+ L+L+ A+S ++++LR+ F D LF+R Sbjct: 3 KGGVVDALRKLDLNLLVVFQHLLEERNISAVARRLDLSQPAVSNALRRLRLAFGDELFVR 62 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVI 135 QG+ PT A + +S+ L + D +D QR + IA + + +P + Sbjct: 63 TAQGMLPTPLAEGMGGQVSEALSLLSHLADAAQPFDPATSQRRLRIAMSDAGEIHFMPTL 122 Query: 136 YRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 H P + + + +D + +L + DL + + +LF + R Sbjct: 123 MELCARHVPGVRIDSLRCTDLQRELDTGRVDLALGAFDGLGSGIVQRMLFRQGYATLFRA 182 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQIN-------------F 242 G+P R +A EQ+ V PD QIN F Sbjct: 183 GHP-------RAYAGMSARA--FRAEQHLV-----VSRAAPDGQINQALERAGVVLQEQF 228 Query: 243 TSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 + + + +V+ +D+LA +P + + + L+ L P Sbjct: 229 SVPHFAAVPYIVSTTDLLATVPEKLAASAAPRFGLQVLTLP 269 >UniRef50_C1M9D8 Predicted protein n=2 Tax=Citrobacter RepID=C1M9D8_9ENTR Length = 308 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 11/267 (4%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 TL IDLNLLTIF +Y I A +LN++PSA+SQS++KLR + D LF+R G + Sbjct: 12 TLSKIDLNLLTIFCLIYSVGSISRVADMLNISPSAVSQSLRKLREMMGDNLFVRSGNALL 71 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLP-VIYRAIKTHY 143 PT ++ L++ ++ + + + K+R +T+ T + +V+P V R I+T Sbjct: 72 PTVYSDELYDNTIPIIDKLSTLMPLSTPATKKR-LTLYTESFISPIVIPDVTARIIETDA 130 Query: 144 PQLLLRNPPISDAENQ-----LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 LL +D Q L+ Q D + + ++ + +VL + N Sbjct: 131 DISLLH--LTADLNEQSIIELLNMRQADAVFSTFAVESASLSCQKICDMRLVLAASQNNS 188 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L NA V + + R V + F + + + I +V+N+ Sbjct: 189 LYGNTISEAQFRNANLVGYNTKNEKIIYHRSIVDKKFRTGERCLLTSSFTAILTIVSNTH 248 Query: 259 MLAIIPSRFYNLFSRCWPLEKL--PFP 283 L +IP + + ++ + L+K+ PFP Sbjct: 249 CLGVIPEKVFETHAQLYGLKKINTPFP 275 >UniRef50_B5ET44 Transcriptional regulator n=1 Tax=Vibrio fischeri MJ11 RepID=B5ET44_VIBFM Length = 301 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 11/265 (4%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 ++ D+NLL +F +V A++ L LT S++S +I++L+ + LF R G+G+ T Sbjct: 5 KDFDMNLLRVFVSVCQTGSFTKASEELELTQSSVSNAIRRLKKALGNELFTRSGRGIEMT 64 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGAL--VLP----VIYRAIK 140 AF H E + + S++ + G D+ +T + V AL VLP + +K Sbjct: 65 AFGKHFFEAVEPSVMSLVNTI---GRDDRFEPLTSSRNFIVYALESVLPRLQIRLRELLK 121 Query: 141 THYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + L+ P ++ E + L + + DL++D M +++ ++ D I R G+P Sbjct: 122 GSNITVTLKELPSNEEETFDALMREKVDLVLDVMKPHQSSLKSVIVSEDAACCIARIGHP 181 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E E N H L + + +E P R + ++L + A VA SD Sbjct: 182 RIFGEMTHEQYFNEDHAFLNMRRVKQTIMEYLAKEELPKRTMGSEHTSMLGMMACVAQSD 241 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFP 283 + + R + + + L+ LP P Sbjct: 242 FVGVNSVRLVSQYKEQFKLQMLPLP 266 >UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR04_HIRBI Length = 302 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 38/282 (13%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 +I + +DLNLL +FEAVY + + AA +L+L+PSA+S ++++LR DPLF+++G Sbjct: 3 KIHSRTDRLDLNLLKVFEAVYREQNLTRAANLLSLSPSAVSHALRRLRAHLNDPLFVKEG 62 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYR 137 + + PT + + ++ + L G +D ++ TI ++ + P Sbjct: 63 RIMRPTPVCARMAPDLLDEIDRLRALLQSWGKFDPAQSKIVFTIGMPDAMEIVFFPEFVE 122 Query: 138 AIKTHYPQLLL------RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVL 191 I+ P + + RN ++ LS D+ +D T++ ++HH L D+ + Sbjct: 123 KIRQLAPNVRIISARYDRNEMVA----SLSGHTLDICVDIALPTSKQLRHHPLTADDWCI 178 Query: 192 ICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPD---------RQINF 242 + + TI AA L +++ + + V + D R + Sbjct: 179 VSKT-----------HTIQTAADYL---AQEHIAVSARTVGTVLEDSALEQRGIFRDVRV 224 Query: 243 TSYNILTIAALVANSDMLAIIPSRFYN--LFSRCWPLEKLPF 282 N L+ A+V SD + +P R + SR ++ +PF Sbjct: 225 RCQNYLSALAIVERSDRILTMPKRLAQSMIQSRPLKIQDVPF 266 >UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C385_DELAS Length = 332 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 3/121 (2%) Query: 16 SEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPL 75 ++G P+ LR+IDLNLL IFEA+ + + AA L +T SA+S ++++LR F DPL Sbjct: 7 ADGAPRAPVNLRSIDLNLLVIFEALVEERSVGKAAARLGITSSAVSHALRRLRTQFNDPL 66 Query: 76 FIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVL 132 +R +G++PT A+ L + I A+++ +D +R + + VG L+L Sbjct: 67 LLRTAEGMSPTPEAVRLARSFRKAFSEIESAIEVSKGFDPATARRNFHLRLSDYVGVLLL 126 Query: 133 P 133 P Sbjct: 127 P 127 >UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Burkholderiaceae RepID=Q46T42_RALEJ Length = 330 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 8/252 (3%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 D NLLT+F+A+ + + AA L LT SA+S ++ +LR F DPLF++ G+TPT Sbjct: 6 FDYNLLTVFDAMLRERSVTRAAAQLGLTQSAMSHALNRLREFFDDPLFVKTAAGMTPTIK 65 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALV-LPVIYRAIKTHYP 144 A L E + + ++ + + S+D QRT T+ T +G LV LP + + ++ P Sbjct: 66 AEALSETVLDVMTAMRTRVLPQASFDPATMQRTFTLCMT-DMGELVFLPPLMKRLRVVAP 124 Query: 145 QLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 LR P+ E L+ DL++ ++ ++ LF V I N + Sbjct: 125 HCKLRTLQVPVPQIEGLLASGDADLLLGSVQTAPESLFRQQLFMHGFVTIVSTKNRQVRD 184 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS-DMLA 261 E ++ HV + + + R I + + L+I L+ +++A Sbjct: 185 ALTIEQFESMPHVTVSLAGRTSPSYDAAFESHGLRRNIYLHTPHFLSIPLLMEQQPELIA 244 Query: 262 IIPSRFYNLFSR 273 +P N+FSR Sbjct: 245 TVPQELANVFSR 256 >UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales RepID=B7VH72_VIBSL Length = 311 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 6/240 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 + NLL +F AV + AA L+ S IS ++ +L+ LF+RKG+GVTPT++A Sbjct: 7 NFNLLAVFSAVMEQGSLSKAADQLSTNQSTISTALARLKKEIGQELFVRKGRGVTPTSYA 66 Query: 90 MHLHEYISQGLESILGALDIEGSYDKQRTIT--IATTPSVGALVLPVIYRAIKTHYPQLL 147 L+E I + + ++D+Q + + ++P +L + A+ L Sbjct: 67 QSLYEQIKTPIHELNDVFQSMANFDEQSSERKFVISSPEHLQWILLNSFAALPNQNLSLE 126 Query: 148 LRNPPISDA---ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + + P SD E+ L+Q + D +ID + + ++ L+ V++CRE +P + E Sbjct: 127 VFDQPDSDERIYEDLLTQ-EFDAMIDIVVPEHPSIVSETLYEGEFVIVCREDHPRIQGEI 185 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 N H +L + L R+I F ++ + L + SD + ++P Sbjct: 186 SEAQFMNEKHAVLDRTRRKVRSLNHYTSLDLSKRKIVFHGRSLFSNILLCSQSDYITVVP 245 >UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=Vibrionaceae RepID=Q5E7C7_VIBF1 Length = 330 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 5/243 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + +DLNLL F + K + AA L + SA+S S+ +LR + DPLF R+G + PT Sbjct: 27 KAVDLNLLVAFSTLMETKSVSLAANKLFVGQSAMSHSLSRLRELLHDPLFERQGHQMIPT 86 Query: 87 AFAMHLHEYISQGLESILG---ALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 A A+ L+ +++ L++I G +D + + T I T L I+ AI Sbjct: 87 AKAIQLYPLVNKVLQTISGDILKVDTFEASEFTGTFKIGMTDYAELLFAADIFDAIHQLA 146 Query: 144 P--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P QL ++ +++ DL+I +M + Q+ L+T+ V + L S Sbjct: 147 PNAQLCFTTVDKANYQDRFDSEPLDLVIGSMKPELKEFQYQTLYTEKHVCMWDGQRHLFS 206 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + + H L+ P+ +G+ + ++ + R ++ S + LTI L+ D++ Sbjct: 207 SPITLDDYISLPHALVSPDGALKTGVDKELKALGVGRSVSVASKHFLTIRHLMKKRDLIC 266 Query: 262 IIP 264 ++P Sbjct: 267 VVP 269 >UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8IVY8_METNO Length = 341 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 73/315 (23%), Positives = 137/315 (43%), Gaps = 28/315 (8%) Query: 16 SEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPL 75 + G + L +DLNL+ +F+AV + + A + L L+ SA+S +++LR + D L Sbjct: 2 TRGAGTRASILNRLDLNLIRLFDAVMRERHVARAGQSLGLSQSAVSHGLRRLRTLIGDDL 61 Query: 76 FIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVL 132 F+R QG+ PT A+ + + L +I GA+ + +D R +A T + A+V Sbjct: 62 FVRTVQGMEPTPRALAMAVQVRDALTAIEGAIGPQ-RFDPASSTRQFRLAATDHITAVVA 120 Query: 133 PVIYRAIKTHYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMV 190 P + R +T P +L+R D Q+ Q D+++ + LF D V Sbjct: 121 PALMRTFETEAPLASILIRPATRIDLTMQVDLGQIDIVVGIFSQIPHRLHARTLFEDRDV 180 Query: 191 LICREGNPLLSLEDDRETIDNAAHVLL--------LPEEQNFSGLRQRVQEMFPDRQIN- 241 L+ +P D T+ +++ LP+ + R EMF +N Sbjct: 181 LVTAPDHPEAGGATDIRTLARDPLMVVTVGGTEDGLPDGRLSERGLTRQTEMFDRDALNR 240 Query: 242 -FTSYNI-----------LTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQ 289 F + + L + +L+A+S +AI+P+ + F + ++ P Sbjct: 241 AFRAAGLVPRLSVLQPHFLAVPSLLADSRRVAIVPASLAHGFEAA-GVARVSMPPWEPRT 299 Query: 290 IDFSIHYNKFSLRDP 304 + + +++ +DP Sbjct: 300 MAVQMVWHERWRQDP 314 >UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WDE8_PSYWF Length = 302 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 5/261 (1%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +ID+ LL +F+A+Y I AA+ L++ A S + KLR F DPLF+R G + PT Sbjct: 3 DIDVRLLLLFQAIYQQNTISKAAQKLDIGQPAASLGLNKLRQHFDDPLFVRVGNQMQPTQ 62 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYP 144 A +L ++ L+ I D ++ + R I+ T +++P + + +K H P Sbjct: 63 TAQNLFPLVNNALQHIRAVNDYTHHFEPKNSSRRFHISMTDISHMIIVPKLIKYLKQHAP 122 Query: 145 QLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 L I SD +++S + DL I + F + ++ R+ +P L+ Sbjct: 123 HTKLDISAINSDTPSRMSSGEIDLAIGYIPHLEAGFFQQTFFEQHYSVVVRQDHPRLTQN 182 Query: 204 D-DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 E H ++ L ++ R I T L + ++ +D++A Sbjct: 183 TLTLEAYQQEQHADVISSGTGHYLLEDHLRRRHIKRHIAITLPTYLGVGLIIQQTDLVAT 242 Query: 263 IPSRFYNLFSRCWPLEKLPFP 283 +P + L + L LP P Sbjct: 243 LPDKLAKLLLQENRLHTLPLP 263 >UniRef50_A1SEI3 Transcriptional regulator, LysR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SEI3_NOCSJ Length = 300 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 10/210 (4%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 N+DLNLL +A+ + + AA+ L++ A+S ++ +LR +F D LF+R G + PTA Sbjct: 5 NVDLNLLVALDALLTERSVTRAAERLSVGQPAMSATLGRLRKLFGDQLFVRTGGDMVPTA 64 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 L +++ + ++ LD+ ++D +RT T+ + VG +++ + R + P Sbjct: 65 MGQALVGPVTEAIRAVQAVLDVVDAFDPTTDRRTFTVMASDYVGLVLIRPLVRRLSVEAP 124 Query: 145 QL-LLRNPPISDAENQLSQFQTDLII--DNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 ++ L+ P +D E + Q + DL I M ++ LF D V + + Sbjct: 125 EVRLIVQPVAADYEAMIRQGRVDLAILPGEMLDPAPELRRESLFQDRYVFAVDADDASIG 184 Query: 202 LEDDRETIDN-AAHVLLLPEEQNFSGLRQR 230 DR TI+ A+H L ++ L R Sbjct: 185 ---DRLTIEQLASHRRLATGDRELPALGDR 211 >UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LG43_PROMI Length = 323 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 116/232 (50%), Gaps = 16/232 (6%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNLL IF+ + + + AAK L+++PSA+S+++ KLR+ F DPLFIR QG+ P Sbjct: 6 LHRIDLNLLVIFQILLQERSVTLAAKWLSISPSAVSKALAKLRIWFDDPLFIRSPQGLIP 65 Query: 86 TAFAMHLHEYISQGL---ESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTH 142 T ++ + + +S + I + E + + + T + ++LP + + I +H Sbjct: 66 TPLSLSIEDSLSDFINISHHIANKRNTEVPVGLKFNLVLET--PLHQVMLPSLPQQILSH 123 Query: 143 YPQ--LLLRNPPISDAENQL-SQFQTDLIIDNMFCTNR--------TVQHHVLFTDNMVL 191 YP+ L ++N + N + + L+ + ++ + + +LF D ++ Sbjct: 124 YPKSTLQIKNWEYNSLSNIIDGEVDIGLVGREYYSRSKELLELLPDVIDYEILFDDIPLV 183 Query: 192 ICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFT 243 + +PL+ ++ D + + V ++Q+ L ++EM RQI T Sbjct: 184 YLHKNHPLMKMKWDLNNFLSFSQVSTEYDKQSHWALDNILKEMNKSRQIAIT 235 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/285 (23%), Positives = 117/285 (41%), Gaps = 9/285 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++ D+ LL +F+ +Y + + AA L L A+S ++ KLR F DPLF+R G+ P Sbjct: 1 MQTADVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A L + Q L+++ +D +RT I+ T ++LP ++ ++ Sbjct: 61 TPMARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKT 120 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + + P+S + L + DL + M LF V + +P + Sbjct: 121 SPGVHIDIVPLSAETPRMLETGEADLALGFMPQLEAGFYQQSLFRQRYVCVASTDHPRIH 180 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 E + H ++ L + + R I N L IA +V +DML Sbjct: 181 DELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIAFVVEQTDMLV 240 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSI--HYNKFSLRDP 304 IP R + P P E D+++ H+++ DP Sbjct: 241 TIPERLAQVLEGRGRFRVFPVPF---ELPDYAVKQHWHERYHHDP 282 >UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD9_BURXL Length = 305 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 12/264 (4%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 + DLNL+ F A+Y + AA+ LNLT +S ++ +LR + DPLF R +G+ PT Sbjct: 10 STDLNLIRAFVAIYETGSVSAAARRLNLTQPTVSYALSRLRTLLHDPLFSRTREGMAPTF 69 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A L+E Q L+ I GA+ +D R IA + LP + ++ P Sbjct: 70 NASQLYETFRQALDRIEGAIAATRYFDAATSTRCFRIALSDLGELYFLPRMVERLQRTAP 129 Query: 145 --QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 +L + + L+ Q D + N+ + LF++ + +P + Sbjct: 130 GVELEVVQLDVERTAEWLNTGQIDAAVGNLHLVGGKARRRYLFSETYSCLVSHRHPWIGT 189 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLR---QRVQEMFPDRQINFTSYNILTIAALVANSDM 259 A HV+ + SG R + M R+I + + +VA SD+ Sbjct: 190 TLSLGDYVRAKHVV----GASSSGHRLVEDVMTGMGLSRKIALRVPHFTNVVDVVAGSDL 245 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFP 283 + +P+R N++ + LP P Sbjct: 246 VLTLPARVANVYQSTGTVRALPLP 269 >UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZY6_VARPS Length = 325 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 75/272 (27%), Positives = 122/272 (44%), Gaps = 26/272 (9%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +D++LL + A+ + + AA +N T AIS ++++LR F DP+ +R+ G+ PTA Sbjct: 8 VDIHLLRVLAALVAERSVSRAAVRMNQTQPAISAALRRLRDAFGDPILVRERGGMVPTAR 67 Query: 89 AMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ L E + L I L ++ T TIAT + A + + + PQ Sbjct: 68 ALQLRESAREVLGEIDRMLAGPERFEPGASTMTFTIATPDYLAASFMAEVVARFRAEAPQ 127 Query: 146 L-LLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 LL +P P D E L+Q + D++I N + +L D +V + GNPL + Sbjct: 128 ARLLIHPLTPGYDYERALAQGELDIVIGNWPLPPERMHLSLLIEDELVCMMSPGNPLAA- 186 Query: 203 EDDRETIDN---AAHVLLLP--------EEQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 T+ AAHV+ P + + +GLRQ D ++ Y + Sbjct: 187 -PGAMTLQRYLAAAHVVPTPFAKSHRAVVDSHLAGLRQTR-----DARVFVPYYAMAPY- 239 Query: 252 ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 LVA SD++ F F+R P+ + P Sbjct: 240 -LVAESDLVFTTARHFAEQFTRSLPVVSVAAP 270 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 5/260 (1%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 D NLL + + + AA+ L L+PSA+S+++ +LR DPL +R G+G+ PT A Sbjct: 5 DFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVPTPRA 64 Query: 90 MHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQL 146 + L E +SQ ++ L D RT T+ P + + P + Sbjct: 65 LELREQVSQLVQDAAAVLRPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIARVGEAAPGV 124 Query: 147 LLRNPPISDAENQ-LSQFQTDLIIDNMF-CTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 LR P S+ + L DL + T V+ LF D + + R+G+PL E Sbjct: 125 RLRFMPKSNKDTAPLRDGSVDLDTGVVGEGTGPEVRVRALFQDRFIGVVRQGHPLCQGEI 184 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 HVL+ + + + ++ + +R+I AL +D++A +P Sbjct: 185 TPARYAAGRHVLVSRRGTDKGPVDETLRAIGLEREIMTIVGGFAPALALARATDLVATVP 244 Query: 265 SRFYNLFSRCWPLEKLPFPS 284 R LPFP+ Sbjct: 245 ERHTGTLRDGMHSFALPFPA 264 >UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae RepID=Q7MCM8_VIBVY Length = 298 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 4/259 (1%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 ID NLL +F VY H+ I AA + LT +S +++L+ LF R G+G+ PT Sbjct: 5 IDFNLLKVFVTVYRHRSITLAADAMGLTQPGVSGILKRLQEQLGVTLFTRDGRGIAPTHH 64 Query: 89 AMHLHEYISQGLESILGALDIEGSY--DKQRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 A L + L I AL+ ++ D R I + +LP I + Sbjct: 65 AHELARQVEPALSQIHNALESLEAFRTDTYRKFVIYAPEPLMLTLLPKIEGDSTLGKIDI 124 Query: 147 LLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 L++ P + + +L+Q Q DL ID + + + L D + LI R G+P + Sbjct: 125 ELQHMPYDVDEQFTRLNQQQADLAIDFVHHSAPSFYSEKLMNDEICLIARRGHPRIQGAI 184 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 R+ H+ L +N +E R++ +++ +LVA SD +A++ Sbjct: 185 SRDEYYQEKHITLKMRRENVYLADYFTEEFLNVRRVAAECDSMVAQMSLVATSDCIAMVT 244 Query: 265 SRFYNLFSRCWPLEKLPFP 283 F+ L+ L P Sbjct: 245 RSLAEQFAETLGLQVLHSP 263 >UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=Shewanella RepID=B8E7T8_SHEB2 Length = 313 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/285 (23%), Positives = 127/285 (44%), Gaps = 6/285 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 T + +DLNLL +F VY + AA+ L+LT S++S +I + RV + LF R G+G+ Sbjct: 3 TQKPLDLNLLRVFMVVYRTRSFTQAAEELDLTQSSVSNAISRFRVWVGESLFNRVGRGIE 62 Query: 85 PTAFAMHLHEYISQ---GLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKT 141 PTA A ++ Q +E++L + QR + SV + + ++ Sbjct: 63 PTAVAREMYRKFEQPMADIETVLLGFEHFDPKCSQRRFYVYANESVIEALQTGVQALLQD 122 Query: 142 HYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 +++ R P +A+ + + + ID + +LFT+ +V I +P Sbjct: 123 ADIEVIFRESPPQEADLYRDILLERVAVAIDIKPAQQSLLSSKLLFTETLVCIVSRQHPR 182 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + HV L N + + + P R++ ++L++ A V S+ Sbjct: 183 IQGAITHGQYFEEKHVFLNMRRFNLTAGDLFTEGVLPRRKMYSEQSSLLSMFATVGKSEA 242 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 + I P R+ + ++ + ++ LP P L ID + ++ ++P Sbjct: 243 IGIAPLRYASQYAELFGIQILPMP-LKTRPIDLYMVWSSKYTQNP 286 >UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida KT2440 RepID=Q88LJ0_PSEPK Length = 320 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 131/283 (46%), Gaps = 14/283 (4%) Query: 41 YVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGL 100 Y + + AA+ L ++ S S+++LR F D LF+ G+G+ PT F + + +S L Sbjct: 18 YREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGMRPTPFTVSIAASVSGVL 77 Query: 101 ESILGALDIEGSYDKQ---RTITIATTPSVGALV-LPVIYRAIKTHYPQLLLR--NPPIS 154 E I + + ++ + R TI+T+ +GAL+ +P I R + P LR + P Sbjct: 78 ERIKHEILAKPAFQPRQSDRLFTISTS-DIGALIFVPPILRRLGEDAPNTDLRCVSLPHQ 136 Query: 155 DAENQLSQFQTDLIIDNM-FCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAA 213 E L Q DL + V+ LF N I R +P + E A Sbjct: 137 QLEQALEQGSVDLAVGYFPDLQGEQVKTQALFEHNFTCIVRRNHPSIGDTLSLEQFLAAD 196 Query: 214 HVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSR 273 H+++ E ++ QR++E+ R+++ + +++ L+A+++M+A +P F+ Sbjct: 197 HLVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIASTNMVATVPLSLGVWFAS 256 Query: 274 CWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 K+ P + E+ + +H+++ DP + RNA Sbjct: 257 --EQIKMLTPPIEVEKFELKLHWHRQMEDDP----AVSWFRNA 293 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/274 (25%), Positives = 116/274 (42%), Gaps = 27/274 (9%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR++DLNLL FEA+ + + A+ L + + S ++++LR + DPLF+R G+ P Sbjct: 9 LRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFVRTPAGMIP 68 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L E I L SI L S+D ++R I V A++ + ++ Sbjct: 69 TPHALALAEPIRAILTSIERTLFARASFDPRAERRVFRIGAMDYVQAVIADPLLAVLQAQ 128 Query: 143 YP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLI-----CRE 195 P +L+L A L++ + DL I +L+ + + CR Sbjct: 129 APGCKLILTTTDCDTAGRSLARGEIDLAIGAFPQIKAGSHQELLYRERYECVFDAKACRL 188 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPE-----EQNFSG-LRQRVQEMFPDRQINFTSYNILT 249 G + A L LP ++SG L ++ R++ ++ N L Sbjct: 189 GKRV-----------TRAQWLALPHVIMSVHGDYSGPLDDVLKSSGEQREVAVSTPNFLA 237 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 I L+ N ++A +PSR F L P P Sbjct: 238 IPFLLRNKRLIAALPSRMARAFCGRLGLSTCPLP 271 >UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=Gammaproteobacteria RepID=Q5E2I6_VIBF1 Length = 323 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 10/264 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR +DLNLLT+F+AV + I AA+ L ++ A+S ++ +L+++F D LFIR G+G+ P Sbjct: 18 LRGVDLNLLTVFDAVMQEQNITRAAQNLGMSQPAVSNAVSRLKLMFNDELFIRHGRGIQP 77 Query: 86 TAFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 T A L + Q L+ + L R ++ P I + I+ Sbjct: 78 TQRARQLFAPMRQALQLVKNELPSSTFSPETSMRQFKLSICSPSDIRFAPRIMKDIQNKA 137 Query: 144 PQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + L+ D +L + D +ID + LFTD +V++ +P L Sbjct: 138 PHISLKLSGEHEPDIAQKLRYQEVDFVIDYVRFDEPGFMSTELFTDELVVVASVNHPRLQ 197 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDR--QINFTSYNILTIAALVANSDM 259 ++E + + H + + + ++ D + + +I I +V+ S++ Sbjct: 198 NGINKEQLASEKHAV----PARIANTKGFADHLYVDSLYEQAYKGASISNILYVVSQSEL 253 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFP 283 + + P N L LP P Sbjct: 254 ITVAPKWLVNSMPNRDQLMVLPLP 277 >UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB78_PHOPR Length = 305 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/253 (22%), Positives = 119/253 (47%), Gaps = 8/253 (3%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 ++ DLNLL +F +VY AA+ L+LT S++S +I +L+ + LFIR G+G+ PT Sbjct: 5 KHFDLNLLRVFLSVYNTCSFTKAAEELDLTQSSVSNAILRLKKTVGEELFIRAGRGIQPT 64 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 A A L+ + + + ++ +D R + SV ++ P + + +K + Sbjct: 65 AVANQLYHQLENSMLKVEQTVNSFEQFDPLHTAREFHVYAIESVIHILQPRLDKYLKDYA 124 Query: 144 PQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P ++ P + + +QL Q D+++D + ++ + ++ M + +P ++ Sbjct: 125 PTIIFHELPAQEQQMYDQLQAEQIDVVLDIVQPDVVSLSSEAILSEKMCCVVSRHHPRIN 184 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 +E +HV N + E P R++ +++++ A A S+ ++ Sbjct: 185 EVLSKEQFLEESHVFFNMRRFNLTIADYFTYERLPYRKMYCEHSSLMSMLATTARSEAIS 244 Query: 262 IIPSRFYNLFSRC 274 + P Y+L +C Sbjct: 245 MAP---YSLAKQC 254 >UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory protein n=3 Tax=Streptomyces RepID=A3KIZ0_STRAM Length = 312 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 32/295 (10%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 DLNL +F +Y + A+ L++T +S S+ KLR F D LF R G+G+TPTA Sbjct: 3 TFDLNLARVFVLLYETGSVTATAETLHVTQPTVSYSLGKLRRHFGDELFRRNGRGLTPTA 62 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 A L+E + + L I G + ++D TIA + A +LP + A + P Sbjct: 63 GARRLYEPLQRALAEIDGTVRQGDAFDAGTMSGRFTIALSDLGEATLLPRLLAAARERAP 122 Query: 145 QLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + P + DAE+QL + D+ + T+ LF + VL+ +P + Sbjct: 123 GVSFTVRPFDVEDAESQLRRGDLDVFVATPVITSHLTVRIPLFRERYVLMVAADHP--RV 180 Query: 203 EDDRETIDNAA---HVLLLPEEQNFS--------GLRQRVQEMFPDRQINFTSYNILTIA 251 D T+ A H + + + GL +RV ++ T +++L Sbjct: 181 RGDEVTLAGLAAEHHATVFGPSGHVAPRAVLAAHGLLERV-------AVDATRFSMLPY- 232 Query: 252 ALVANSDMLAIIPSRFYNLF--SRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 L+ +D++AI+P +F S L +LPF + + I+ +++ S R P Sbjct: 233 -LLEQTDLVAIVPEYVGEVFTASHRVRLVRLPFET---QPIEIALYARHESSRSP 283 >UniRef50_A6FDU8 Transcriptional regulator, LysR family protein n=1 Tax=Moritella sp. PE36 RepID=A6FDU8_9GAMM Length = 280 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 15/290 (5%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + + D+NL+ F VY I AA++LN++ AIS +I++L PLFIR G+ ++P Sbjct: 1 MHDFDMNLIKPFAKVYELNSITKAAELLNVSQPAISGAIKRLETYLGYPLFIRSGRKLSP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 T A + + +S LE + AL +K+ I A P L L I H Q Sbjct: 61 TPNAQNFYSQVSTVLEIVDNALG-----NKEHFIVYA--PESILLKLSGI------HDIQ 107 Query: 146 LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDD 205 L+ + D N L + DL IDN+ + + ++ +++ L+C + +P ++ Sbjct: 108 LIESSDSEEDTFNDLRMRKIDLAIDNVTQQDNSFCFELVRKEHLKLVCCKNHPTVTDSIT 167 Query: 206 RETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPS 265 E HV + N + + R I + + V NSD +A IP Sbjct: 168 MEHYLQLGHVAMKLVRNNMRAVEYFAKTALKARDIRVQVSSPANMMLAVQNSDYIAAIPE 227 Query: 266 RFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++ K+ P + IDF + Y+K L+D + + I+N Sbjct: 228 GLCHIADSLGL--KVIEPPFTMKPIDFHLIYHKRYLKDKGHQQLRETIKN 275 >UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3H6_9ENTR Length = 303 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 19/250 (7%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 IDL L +F+A+ + + AA + LT A+S + KLR F D LF+R QG+ PT Sbjct: 7 IDLKQLRVFKALLKERNVTRAAAQMGLTQQAVSAQLSKLRDTFQDHLFLRSAQGLIPTPL 66 Query: 89 AMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L ++ ESI AL +D T I+ T A++LP + ++T P Sbjct: 67 AEQLEPRVNTVFESI-AALSPPDRFDPAEVYTTFVISATDYAVAVILPRLMAKVRTQAPG 125 Query: 146 LLLRNPPISDAENQ-----LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 L L I D E+ L+ DL + Q LF+++ + + R +P+ Sbjct: 126 LKLI---IRDFESDRLYPLLTSGDLDLALTFPAFVPDGCQTKWLFSEHHICVTRSDSPMQ 182 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFP----DRQINFTSYNILTIAALVAN 256 + + I + +++ P N G + F R I + + A +A+ Sbjct: 183 NQQFTISDIADLPQIIVSPTRANLIG---SADDWFASKGYSRNIVMSVPSFAAAPACIAS 239 Query: 257 SDMLAIIPSR 266 +D +A +PSR Sbjct: 240 TDCIAFLPSR 249 >UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A8FU12_SHESH Length = 304 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 13/267 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L +DLNLL A+ + + AA+ +N++ SA+S ++ +LR +F D LFIR +G+ P Sbjct: 6 LAKVDLNLLKSLRALIEERHVGRAAQKMNVSQSAMSHTLARLRGVFDDSLFIRNAKGLEP 65 Query: 86 TAFAMHLHE---YISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTH 142 TA A+ L + +I + ++S+L +E S+ I T + A L ++ I Sbjct: 66 TARAIELSDKLRFILREIDSLLAPKTLELSH-IHAHFRIQTHDFILASYLSKAFKRINHE 124 Query: 143 YPQLLLRNPPISD-AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P +L+ + + A ++L + ++II L +N+V + +GNP+L Sbjct: 125 APNILIDIKILDETAYDKLDDGELEMIIGAGLQAKPRFMQKRLTDENLVCLLDKGNPVLK 184 Query: 202 LEDDRETIDNAAHV---LLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 ETI H+ LL + S + + P R+I F + + L+++SD Sbjct: 185 -NWTPETIFRYPHIKSSLLDDRDDPVSKYGKAMG--LPKRKIGFLAETLNFQLPLLSDSD 241 Query: 259 MLAIIPSRFYNLFSRCWPL--EKLPFP 283 ++A +P S+ + L ++ PFP Sbjct: 242 LIAFLPDSIAKKGSQVYGLVVKECPFP 268 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 60/265 (22%), Positives = 123/265 (46%), Gaps = 10/265 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++ +L LL IF+A+ + + AA L +T A+S +I ++R I+ DPLF+RKG+ + P Sbjct: 1 MKTQELQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T++A+ L + + + ++ A+ +D +RT IA T + ++ + ++ Sbjct: 61 TSYALSLWDQVGDPMFALTNAVSAT-QFDPASARRTFRIAVTDVIVEMIWRQLIDLLERE 119 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + + P + + + L DL I + + +++ L VL R +PL Sbjct: 120 APGVDVHAVPYTPEGSYDDLRSAHVDLAIGVLNQHDYSLRSTWLLDSGFVLAMRADHPLA 179 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + E A H+L+ + + + R+I T + ++ ++ S+++ Sbjct: 180 GRQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVPQVLRESNLI 239 Query: 261 AIIP---SRFYNLFSRCWPLEKLPF 282 A +P S+ W + +LPF Sbjct: 240 AAVPELISQDCGFVDGLW-MGELPF 263 >UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=Burkholderiaceae RepID=B2JTT0_BURP8 Length = 324 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 33/285 (11%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNLL +F+A++ + + A K L+L+ SAIS ++ ++R + D LF+R G+G+ PT Sbjct: 5 RIDLNLLRVFDAIFEDRNLGLAGKRLHLSQSAISHALARMREVLGDDLFVRTGKGMEPTM 64 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A+ + + L+ I AL ++ +D QR +A + +L+L + + + P Sbjct: 65 RALRMAAQVRGALQQIRAALGVD-EFDPRVAQRKFVVAANDYITSLLLGRLSQRLHAEAP 123 Query: 145 --QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 L++R D Q+ + D+ I ++ L+ V++ +P+ Sbjct: 124 LVDLVVRPSTRLDLAGQIDVGRIDMAIGIFADVPTRLRGTTLWEQTDVVLLHRDHPIAGR 183 Query: 203 EDDRETIDNAAHVLLLPEEQNF-----------SGLRQRVQEMFPDRQIN---------- 241 R+ D AH L+ + GL R EMF +N Sbjct: 184 AVTRD--DMLAHPLIAISQGGEEEGAVGGFIVERGL-ARQSEMFNRDALNRAFDDPAETP 240 Query: 242 ---FTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 + + L + AL+ +SDMLA++PS R L+ P Sbjct: 241 RMRMSVAHSLALPALLRHSDMLALVPSSLGRELQRYGELKMCATP 285 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 21/271 (7%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNL +F+A+Y + AA VL +T A+S S+ +LR + DPLF+R G +TP Sbjct: 3 LNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSMTP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A ++ + L + ++ ++D + + A + A ++P + ++ Sbjct: 63 TPAAQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFAARDLLEASIMPRLTAQLQNV 122 Query: 143 YPQLLLRNPPISD-------AENQLSQF--QTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 P + L N IS A L + + +D C + + D V+I Sbjct: 123 APNITLTNYDISRSNIVSAMASGSLDFYADASSAFVDPHLCKQKIAE------DRFVVIA 176 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 R +P LS + +T H+ + + + ++ R++ + LT+ A+ Sbjct: 177 RRNHPALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFLTVPAV 236 Query: 254 VANSDMLAIIP---SRFYNLFSRCWPLEKLP 281 + +D++A +P ++ Y+ P E P Sbjct: 237 IVKTDLIACVPYHLAKHYDCSIYELPFELAP 267 >UniRef50_Q7VQS7 LysR-family transcriptional regulator n=2 Tax=Candidatus Blochmannia RepID=Q7VQS7_BLOFL Length = 307 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 6/221 (2%) Query: 49 AAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALD 108 AAK LN+T AIS+S+ K+R++F D + +R G +TPT AM L E I + I ++ Sbjct: 24 AAKKLNVTAPAISKSLNKIRILFNDQILVRSGTKLTPTPKAMALKENIKDLVNQIETLIN 83 Query: 109 IEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQT 165 ++ + T TIA+ S+ + +++R I+++ P + + SD ++ + T Sbjct: 84 SNIVFEPKYTNTSFTIASNSSIFFALNTILFRDIQSNTPNIFINLVNDSDYDDDFLRNNT 143 Query: 166 -DLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNF 224 DL + M N + ++ LICR +P+LS + + + + + + + Sbjct: 144 IDLYVGEMRSLNPEITIRTIYMSKSCLICRNHHPILSKHKNMDNL--LKYPFIQTKHEYL 201 Query: 225 SGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPS 265 + + + +R I + + +T V +S++LAIIP+ Sbjct: 202 INTDETNKYFWSERNIVGITPDYITTINAVTHSNILAIIPN 242 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/271 (22%), Positives = 116/271 (42%), Gaps = 12/271 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNLL +F A+ + + AA + L+ A+S ++++LR + D LFIR G+ P Sbjct: 12 LNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRSTDGMQP 71 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T L I L+ + A+ ++ D + T + L++P + + Sbjct: 72 TERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLTARVAKQ 131 Query: 143 YPQLLLR-------NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 P + LR N + DA + L + + DL + F T +L V + R Sbjct: 132 APNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVIQDFDTPSRFDRELLGASEFVCVARA 191 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 G+P+ E + H++ + +S + + + +M R+I + + A Sbjct: 192 GHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRIELRVPHYSAALSATA 251 Query: 256 NSDMLAIIPSRFYNLFSRCWPLE--KLPFPS 284 +D++ +P + + L+ +LPF + Sbjct: 252 LTDLVYTVPRILAQHAEQAFGLQVSELPFEA 282 >UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6I2_SPHWW Length = 301 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 13/266 (4%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + +DLNLL F+ + H+ + AA+ ++L+ SA+S ++ +LR F D L + +G+ + T Sbjct: 4 QGLDLNLLVAFDTLAEHRSVSLAAEAMHLSQSAMSAALARLRAYFDDELLVPRGRTLVLT 63 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 A L + L I + ++D +R TI + V A++L R H Sbjct: 64 PRAEQLAPEVRDTLLRIHATIAHPAAFDPIETKREFTIVASDYVQAVLLEPFMRKAAHHA 123 Query: 144 PQLLLRNPPISDAENQLSQFQ---TDLII--DNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + R PIS + + +F+ DLII D++ Q LF D LIC +P Sbjct: 124 PGMRFRILPIS--QQGIDEFKRGVIDLIIVADSVILPEHPSQK--LFEDEAKLICSADHP 179 Query: 199 LLSLEDDRETIDNAAHVLL-LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + E E HV L + S + E R+I +A V + Sbjct: 180 TIGDEISMEQFGTVGHVTTSLHHHRPGSLFDLMLLERSIARRIEIQVPAFSMMAGAVVGT 239 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFP 283 + +AI+ +R ++R P++ L P Sbjct: 240 ERVAILHARLATSYARILPIKLLSLP 265 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 5/261 (1%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +D L F A+Y + AA LN++ S ++KLR F DPLF+R GQ + PT Sbjct: 4 ELDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPTP 63 Query: 88 FAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A + + L+ L ++ + QR TI T +LP++ A++ Sbjct: 64 RADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQQAA 123 Query: 145 QLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + D + N L + DL I + +V LF + V + E +P + Sbjct: 124 DGITFTIQNLDEQTLNALESGKCDLAIGYLTQLPDSVYQQHLFDQSYVCLAAENHPRIRT 183 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 + E H+ + E + +R+ E R+I T + L LVA SDM+A+ Sbjct: 184 QLRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGELVAESDMIAV 243 Query: 263 IPSRFYNLFSRCWPLEKLPFP 283 +P + +R +P P P Sbjct: 244 VPEQVARHITRRYPCRSWPLP 264 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 78/311 (25%), Positives = 135/311 (43%), Gaps = 58/311 (18%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +DLNL+ +F+AV + ++ A++ L+L+ SA+S ++ +LR +F+R G+G++PT+ Sbjct: 25 KLDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKGMSPTS 84 Query: 88 FAMHLHEYISQGLESILGALDIEGS-YDKQ---RTITIATTPSVGALVLPVIYRAIKTHY 143 +A+ + + L S+ AL + + Q R+ IA V A +LP + + Sbjct: 85 YALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSATLLPQLNHQLSKVA 144 Query: 144 PQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCT-NRTVQHHVLFTDNMVLICR------ 194 P + L+ P + D Q+ + D+ I R VLF D V IC Sbjct: 145 PGIDLQITPATRLDLAEQIDLGRIDVAIGTFRSVPERFRTKPVLFQDE-VFICSGTHPIS 203 Query: 195 ---------------------EGNPLLS-------LEDDRETIDNAAHVLLLPEEQNFSG 226 EG +LS L + D A L + N +G Sbjct: 204 ANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTA----LEQALNEAG 259 Query: 227 LRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRC--WPLEKLPFPS 284 L R Q + P + L + L+ S++LAI+P F+R + ++ LP+P+ Sbjct: 260 LSMRRQIVLP---------HFLALPMLLEGSELLAIVPQPLARTFARTLGFKIKPLPYPA 310 Query: 285 LNEEQIDFSIH 295 +Q+D H Sbjct: 311 -ARQQLDLIWH 320 >UniRef50_A4BGW0 Probable transcription regulator protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BGW0_9GAMM Length = 304 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 57/94 (60%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 TL +DLNLL + EA+Y H+ + AA+ LN+TPSA+S ++++LR DPLF R+GQ Sbjct: 4 LKTLNQLDLNLLKVLEAMYQHRNLTRAAEALNITPSAVSHALKRLRDSLDDPLFERRGQQ 63 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ 116 +TPT L + Q L ++ +L G + + Sbjct: 64 MTPTPVCRRLVPEVLQTLNTLRRSLQSFGEFSPE 97 >UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=Rhizobiaceae RepID=C6B2W9_RHILS Length = 334 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 17/263 (6%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNLL +FE V + + + + LNL+PSAIS + +LR++ DPLF++ +GV P Sbjct: 7 LSRIDLNLLVLFETVMEERHVGRSGQRLNLSPSAISHGLGRLRMLLGDPLFLKTPKGVVP 66 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A L I+ L + + +D QR TI V ++ LP + + Sbjct: 67 TDRAEELAAPIADILARVRSVVATAEPFDPAHSQRRFTIGAPDGVSSVFLPPLLDLLAKF 126 Query: 143 YP-------QLLLR----NPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNM 189 P QLL + +P ++ DA L D+ I +L+ ++ Sbjct: 127 APGIAISVRQLLPKQGEPSPDLAWRDALAALEARDMDIAIIPQAGFPIRFASLLLYEEDF 186 Query: 190 VLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 V+ R+ +P L ++ T A H+++ + + R++ T N + Sbjct: 187 VIAARQCHPFL-IDQTLATYCAAQHLVVSHLGDTHGFVDNLLASHGCSRRVALTVPNFML 245 Query: 250 IAALVANSDMLAIIPSRFYNLFS 272 A++A +D ++ +P RF + + Sbjct: 246 ALAVLAETDFISALPRRFVEMHA 268 >UniRef50_B5XW08 Transcriptional regulator, LysR family n=9 Tax=Enterobacteriaceae RepID=B5XW08_KLEP3 Length = 310 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 16/259 (6%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR IDLNLL +F+AVY + + AA+ L ++ SA+S ++ +LR DPLF R+G + P Sbjct: 8 LRRIDLNLLPVFDAVYRSRSVRLAAEELAMSTSALSHALSRLRSALNDPLFYREGHRMCP 67 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKTH 142 + +A L I+ L+ + L ++ + IA T V P + ++ Sbjct: 68 SVYASQLAPSIASALKFLNQELTPPAAFVPAASTDCMQIAITDFTAFCVFPTLMHHLQRE 127 Query: 143 YPQLL--LRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVL-----FTDNMVLICRE 195 P L LR P S A +L + DL + F T H L D V+I + Sbjct: 128 APGLRFELRYLPHSPALTELLAGEVDLALG--FNTPDEPAHPDLEEINWLRDEYVVISQA 185 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 L+L + A H+++ P + L ++ RQ+ + ++L+ ++ Sbjct: 186 DRTALTL----DAYLAARHLVVTPWNEQQGVLDCELERQGYSRQVAMKTPSMLSAPFIIE 241 Query: 256 NSDMLAIIPSRFYNLFSRC 274 SD+L +P R +R Sbjct: 242 QSDLLMALPRRAAETMARA 260 >UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW61_ARTS2 Length = 295 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/289 (22%), Positives = 129/289 (44%), Gaps = 14/289 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + ++DLNL+ F ++Y + + A + +T ++S ++ +LR DPLF R G+TP Sbjct: 1 MADLDLNLVKTFVSIYETRSLTQTAAEMCITQPSVSHALSRLRRQLGDPLFTRGAGGMTP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L L +I A+D +D RT + + LP + + + Sbjct: 61 TRVAVELFSTFKASLNAIDLAIDGTRDFDPTTSSRTFRLCLSDLGEMAFLPALMKRLLDS 120 Query: 143 YPQLLLRNPPISDAENQLSQFQTDLIIDNMFCT---NRTVQHHVLFTDNMVLICREGNPL 199 PQ++L P+ +++S++ +D + ++ V+ ++ V + +G Sbjct: 121 APQIVLEVVPMQI--DKVSEWLAHGAVDAAIASVPIGGAIRSRVIDQEHYVCVLPDGAGG 178 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 L+ + HV++ P + + + +R I ++ + ++A ++ Sbjct: 179 LAEKMTLSQFTGMRHVVIDPSAGHHLA-EAEIAALGIERNIALRLHHFSVLPLVLAGQNL 237 Query: 260 LAIIPSRFYNLFSRCWPL--EKLPFPSLNEEQIDFSIHYNKFSLRDPIL 306 AI+PSR +F+ PL +LPF N D S+++N + R L Sbjct: 238 AAIVPSRVARMFTEQAPLTIRELPF---NVPSFDVSLYWNGTAPRSRAL 283 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 11/248 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNLL +F+A+Y H+ + AA + ++ SA S I +LR F D LF+R + P Sbjct: 3 LHQIDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQMQP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT---IATTPSVGALVLPVIYRAIKTH 142 T A + +++ Q L I A++ +D T I+ T +LP + + Sbjct: 63 TPRAEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVSHQ 122 Query: 143 YPQLLL-----RNP-PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 P + L + P P++ EN F L + + ++HH +D+ + R+ Sbjct: 123 APNIKLTVIGAKAPQPLTHLENNEVDFA--LGFSHEIEASSLIEHHTWLSDSYCTVARKN 180 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +P L+ D +T HV + P + + Q + + R ++ ++L + + Sbjct: 181 HPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQVLAQHKLKRHVSLQLPSVLVAPHSIIH 240 Query: 257 SDMLAIIP 264 SD++ +P Sbjct: 241 SDLILTMP 248 >UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=Q3S4D5_POLNA Length = 301 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 5/179 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR IDLNLL +F + + + + +A+ L LT A+S ++++LR + D LF+R +G+ P Sbjct: 3 LREIDLNLLVVFNQLLLDRSVSTSAEKLGLTQPAVSNALKRLRAVLKDELFLRTSRGMEP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T +A+HL E + L ++ A S+D RT +A T +P + A+ Sbjct: 63 TPYALHLAEPVIYALNALQTAFTTRNSFDPLASTRTFNLAMTDIGEMYFVPPLMNALSEA 122 Query: 143 YPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + + P + + + DL + + LF V + R+G+PL Sbjct: 123 APHVRISTVRPNAGNLKEDMESGTVDLALGLLPNLQTGFFQRRLFLHKYVCMFRKGHPL 181 >UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=A3YHF6_9GAMM Length = 308 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/238 (22%), Positives = 111/238 (46%), Gaps = 3/238 (1%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNL+ IF+A+ K I +AA L +T ++S ++ ++R + DPLF+++G+G+ PT +A Sbjct: 5 DLNLVVIFDAIMKEKSITSAADSLAMTQPSVSNAVSRMRHAWKDPLFVKEGRGIRPTPYA 64 Query: 90 MHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLL 147 L + +++ L I A+ E + + I T ++V P + I+ P + Sbjct: 65 TKLWKRVAEPLAQINHAIAPEYFDPLTSKASFRIGITDGSASIVWPELRHIIEQEAPNIN 124 Query: 148 LRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDR 206 + P D E L+ DL+ D + + + ++ + V + R + L + E Sbjct: 125 IYAVPYKVDGELLLNNADVDLVFDYYDGNSDEIFYKSMYENQFVTVMRADHELANEELTL 184 Query: 207 ETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 E + H+L+ + ++ E+ R+ T + + L+ + ++ +P Sbjct: 185 ERYIKSEHLLVSLSGDVCGIVDDKLAELNAKRRTAMTVNSFASAINLIKQTRLIITMP 242 >UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CG0_MESSB Length = 304 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 109/259 (42%), Gaps = 30/259 (11%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDL L F + + + AA L L +S+ + KLR F DPL + G + PT Sbjct: 5 KIDLFTLRGFSILMEERNVSRAAFKLGLKQPTMSRMLAKLRAYFDDPLLVWSGGHMVPTP 64 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIKTHYP 144 A+ L I Q L ++ +D + TI +A T + L + + P Sbjct: 65 RAILLESEIHQVLATMERLSSSPQEFDPKTSGLTIRLAATGYTENVFLARVMSEVAVRAP 124 Query: 145 --QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 QL +R P + L + + D ++ ++ VLFTD +V I R G+P +L Sbjct: 125 GVQLEIRPPDRLHDTSALEKGEVDFLVGWNVTPAPVLRSRVLFTDELVCIARAGHP--AL 182 Query: 203 EDDR--------------ETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNIL 248 ED +T LLL E L QR F + F N+L Sbjct: 183 EDGNLSYERYVALPHVQFDTPSKTTTELLLHER-----LAQRGDRPF----VQFRVQNLL 233 Query: 249 TIAALVANSDMLAIIPSRF 267 T+A +VANSD++A + RF Sbjct: 234 TVAEIVANSDLIATVSKRF 252 >UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SW87_9BURK Length = 330 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 122/253 (48%), Gaps = 14/253 (5%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +IDLNL +F+A++ + + A + L +T SA+S +++++R F D LF+R +G+ P Sbjct: 3 IHSIDLNLFLVFQAIFATRSVTLAGERLGMTQSAVSNALKRMRERFNDVLFVRSAEGMVP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALV-LPVIYRAIKT 141 T A L + +GL + A+D +++ R IA +G LV +P + + Sbjct: 63 TPLAERLIGPVEEGLAAFSQAVDQGRTFEAGTSGRLFRIAVN-DIGQLVMMPRLLSLARG 121 Query: 142 HYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + + P ++A ++ Q D+ + + + LF + V++ +PL Sbjct: 122 LAPGIRFETVDVPRAEARQRMLHGQIDVALGSWEPMGPSFYQQRLFDETFVVLVARASPL 181 Query: 200 LSLEDDRETIDN---AAHVLLLPEEQNFSGLRQRVQEM--FPDRQINFTSYNILTIAALV 254 + D +D+ A H+ P L+Q ++ + R++ T+ + L ++++V Sbjct: 182 GT--RDSIALDDYLAAEHIAYRPRGTTDHQLQQALERVGALDRRRVVLTAAHSLGLSSIV 239 Query: 255 ANSDMLAIIPSRF 267 A + ++ P R Sbjct: 240 ATTGLVLTAPQRL 252 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 111/263 (42%), Gaps = 6/263 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L +LNLLT F+A+Y H+ + AA+ L+LT A++ ++ KLRV F +PLF+R G+ P Sbjct: 3 LSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGMHP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTH 142 T +A L I+ L+S+ LD + Q I L LP I + + Sbjct: 63 TPWADALAPKIAHVLDSV-RRLDEPTPFQPQSAKNQFKIYVNDIGMMLALPKIVQLLNQD 121 Query: 143 YP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P QL + + + N L + DL I + L + V R+ +P + Sbjct: 122 APHTQLTVIDLRQDEVVNALDVGEIDLAIGYFVGVPNWARQQHLRDTSYVCAMRKDHPSI 181 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 NA H + + L + + + R I + I L A SD + Sbjct: 182 GDTMTLTQYLNARHAMYWTHGSTYGRLDEALAKRGFSRDIAVRIPRLGAIPFLAAFSDFV 241 Query: 261 AIIPSRFYNLFSRCWPLEKLPFP 283 IP LF P++ +P P Sbjct: 242 VTIPEDLGLLFRDLIPIKLVPVP 264 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 72/307 (23%), Positives = 136/307 (44%), Gaps = 22/307 (7%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNLL + + + AA L L+ SA+S+S+ KLR F DPLF+R G+ Sbjct: 20 LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79 Query: 86 TAFAMHLHEYISQGLESILGALDI---EGSYDKQRT---ITIATTPSVGALVLPVIYRAI 139 T A+ ++ L+ ++ L++ + Q + IA SV L++P I Sbjct: 80 TPKAL----FLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTI 135 Query: 140 KTHYPQLLLRNPPISD--------AENQLSQFQTDLIIDNMFCT---NRTVQHHVLFTDN 188 H P L + ++ E D+ I++ T + ++ DN Sbjct: 136 FRHGPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDN 195 Query: 189 MVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNIL 248 + R G+P+L + + + N HV + + + L R+ ++ +R I T + Sbjct: 196 QRCVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFN 255 Query: 249 TIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHG 308 + A+L +D + PS F + ++ L +LP P + + +++ +++ DP L Sbjct: 256 SAASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLP-MEFPPMAYTLFWHRERENDPALRW 314 Query: 309 VIDVIRN 315 + ++I+ Sbjct: 315 LRELIQT 321 >UniRef50_A1A8Q4 Putative uncharacterized protein n=1 Tax=Escherichia coli APEC O1 RepID=A1A8Q4_ECOK1 Length = 113 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/38 (92%), Positives = 36/38 (94%) Query: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFE 38 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDL LLTI + Sbjct: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLTLLTILK 38 >UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08NF6_STIAU Length = 322 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 4/251 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L +ID NLL + +A+ + A+K + L+PSA S ++ +LR + D L +R G+ + Sbjct: 15 LSSIDTNLLVVLDALLQEGHVGRASKRVALSPSATSHALARLRELLGDELLVRAGRQLVL 74 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIKTH 142 T A+ L + Q +E + L S+ + T + TT + ++L + R + Sbjct: 75 TPRAIALAPQVRQLMEQMERILRPAESFHPAKLEHTFRVLTTDHIEFVLLRPLDRFLTDE 134 Query: 143 YPQLLLRNPP-ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P+++L N P + DA +L + DL + LF D V + REG+P+L+ Sbjct: 135 APRVILHNRPMVPDAVEELRGGRADLAFGVFTDLPDDISSQELFKDRFVTLVREGHPVLA 194 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + HVL+ P S + + E R++ T + L+ VA SD Sbjct: 195 RPLTLKRFAELDHVLVAPRGTATSRMDLLLAERNLKRRVVRTLGSFLSAPFFVAQSDHAV 254 Query: 262 IIPSRFYNLFS 272 + +R + + Sbjct: 255 TLSARIADALA 265 >UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q38ZY8_BURS3 Length = 310 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 9/265 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR+ D+NLL F+A+ + + AA L + A+S S+ LR++ D LFIR G+ + P Sbjct: 9 LRSFDMNLLIAFDALMQERSVTRAAAKLRIQQPAMSHSLSTLRLLLRDELFIRVGRTLQP 68 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L + L + AL E S+D +R +A T + +L+LP + +T Sbjct: 69 TPRALSLQHTVRSSLLQLQEALKTEESFDPSNARRDFRVAMTNGIESLLLPDMVARFRTD 128 Query: 143 YP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 LL R+ D + L + + +L I T+ ++ H LF N L C LL Sbjct: 129 AQGMTLLARSVDPQDMPDMLDRGELNLAIGCYESTHPWIRRHELF--NETLTCCFNPDLL 186 Query: 201 SLED--DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 ++ D +T HV++ L +++ + I N L + + A++ Sbjct: 187 PIKTPIDEQTYVETPHVVVSMRNTILGCLEDALRDARVELNIVSAGPNFLAVLMMAADTP 246 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFP 283 +L +PSR ++ + L P P Sbjct: 247 VLTTLPSRIALRYADRFGLSTCPVP 271 >UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=Vibrionales RepID=B7VQ63_VIBSL Length = 304 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 4/265 (1%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + + +DLNLL++F VY K I A++ L +T +S ++++L+ LFIR+G+G Sbjct: 1 MSDMEKLDLNLLSVFLEVYRLKSITLASESLGMTQPGVSGALKRLQAQLGTDLFIREGRG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYD-KQRTITIATTPSVGALVL-PVIYRAIK 140 +TPT AM L + L+ I A+ +D +Q + +G L P++ + Sbjct: 61 ITPTNAAMQLALRVEPALDGITSAVSTLKQFDNQQHHVFRILVNEIGLTKLQPLVEKDDT 120 Query: 141 THYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + P ++ + LS Q DL ID + + + D +VLI ++G+P Sbjct: 121 LGNISIEFNMVPSNEEDLLQSLSMQQADLAIDIHYPQVNGYMNQQVIEDELVLIAKKGHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + H+ + + R+++ +++T+ LV+ SD Sbjct: 181 RIDGSVTEAQYYHEKHITFRMRRSHLYTADYFTKNPIQQRKVSSECDSLMTMCVLVSGSD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFP 283 + F N F+ + L+ L P Sbjct: 241 CVGSTSRGFANQFAERFQLQVLEQP 265 >UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X639_OCHA4 Length = 324 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 78/322 (24%), Positives = 143/322 (44%), Gaps = 32/322 (9%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +++ NIDLNL+ +F A+ + + A + LNLT SA+S ++ KLR I D LF+R QG Sbjct: 1 MSSIHNIDLNLIRVFNALMEERNVTKAGERLNLTQSAVSHALGKLRYILSDELFVRGPQG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAI 139 + PT A L + + L I AL +D + +AT+ + P + + Sbjct: 61 MHPTPRAEELSQPLRSALADISAALS-PVQFDPATADMSFVVATSDFYIGTLFPAVMERL 119 Query: 140 KTHYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + P + L +D +L + L++ + L + + V I R+ + Sbjct: 120 EKEAPGIRLWLRLFNDLNLVEELDRGTLHLVVGAFGRIPSRFRRETLVSVDNVWIMRKDH 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQ---NFSGLRQR------------------VQEMFP 236 P S ET+ + H+ +L + +G++++ ++E+ Sbjct: 180 PASSGPLTIETLGHYPHIDVLLSGRAAMEAAGMQEQEGLERAFVTSNPPFLEGLLREVGL 239 Query: 237 DRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP--LEKLPFPSLNEEQIDFSI 294 R+I T IL + LVA ++M+A++P + + L + P+P L QI+ + Sbjct: 240 SRRIGATVSLILAVPPLVAATNMIALLPRSVAETYKDTYGLVLHEAPYP-LPATQINM-L 297 Query: 295 HYNKFSLRDPILHGVIDVIRNA 316 +N F P + + V+R A Sbjct: 298 SHNTFGAH-PAVAWLRSVLREA 318 >UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhizobium sp. TAL1145 RepID=Q8KY13_9RHIZ Length = 320 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 6/182 (3%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 TL IDLNLL +F+ + + + AA T SAIS S+ +LR IF D LF+++ + Sbjct: 6 TLNQIDLNLLRVFDLLMQERSVTKAADRAGRTQSAISHSLNRLREIFGDELFVKRAGSMN 65 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKT 141 PTA A L I+Q L I G + ++ + R I T AL LP + + Sbjct: 66 PTAQARELATVITQALSDIEGVVSQRINFKPSESHRQFRIGVTDYTSALYLPTLLEEFNS 125 Query: 142 HYPQLLLRNPPI--SDAENQLSQFQTD-LIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P LR P+ +A LS D ++I N + VL M+ GN Sbjct: 126 KAPNARLRIVPVYLYEAAELLSDPDLDCVLIGNPIIRESHIVETVLARHEMLCAAWSGNA 185 Query: 199 LL 200 ++ Sbjct: 186 VI 187 >UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CV67_VARPS Length = 300 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 32/277 (11%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNLLT+ A+ + + AA+ L+L A+S ++ +LR + DPL +R+G+ + P Sbjct: 6 LSRIDLNLLTVLAALMRERHVSRAAQRLHLGQPAVSHALARLRELTGDPLLVRQGRVMEP 65 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTH 142 T A+ L + + LE I + ++ R I T + +LP + RA+ Sbjct: 66 TERALALMQGLGPALEQIEATFRAQADFEPARAAPVFRIGLTDDLQIAMLPRLLRALSVE 125 Query: 143 YPQLLL-------RNPPISDAENQLSQFQT---DLIIDNMFCTNRTVQHHVLFTDNMVLI 192 P+ L RN E Q+S T DL RT + +L D Sbjct: 126 APRARLVTLTVCYRNAARYLDEGQVSAVMTFLKDLPAGAKIRKVRTARFALLRADT---- 181 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 L+L+D HVL+ + + + E+ R++ F+ ++ A Sbjct: 182 ---AAARLTLDD----YCRRRHVLVTYAGDLCGTVDETLNELGRQREVAFSVPQFGSLPA 234 Query: 253 LVANSDMLAIIPSRFYNLFS-----RCWPLEKLPFPS 284 ++A +++LA +P S RC E LPF S Sbjct: 235 VLAGTELLATVPEHVALALSAQGGLRC---EALPFES 268 >UniRef50_B7VJR0 Transcriptional regulator n=7 Tax=Vibrionaceae RepID=B7VJR0_VIBSL Length = 309 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 27/267 (10%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ++DLNLL F VY K AA+ L ++ A+SQ++QKLR F D LF++ G+ PTA Sbjct: 8 SLDLNLLRTFLIVYQEKNTRKAAERLFVSQPAVSQALQKLRHHFNDDLFVKVHGGLQPTA 67 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIKTHYP 144 F+ L I ++ + A++ ++D + T+ IA +P V + + +++ IK P Sbjct: 68 FSEQLTNQIKPFMDGLSIAVNTSNTFDPKEIDYTLKIALSPVVLSCLSGSLFKDIKAQAP 127 Query: 145 QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMV-----LICREGNPL 199 L+ P S++ +S Q D ++ + V +T ++ + R+ +P Sbjct: 128 NAKLKLVPWSNSS--VSDIQKDEVLMGVSYLGEKTSKEV-YTRQLIELTGRIFVRKDHP- 183 Query: 200 LSLEDDRETIDNAAHV----LLLPE-EQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 L+ D T ++ A L+ P NFS Q + ++ + +I F S ++ I ++ Sbjct: 184 --LKQDTVTPNDMAGYEIASLVTPGWNDNFSLASQILTDLSIEHRIGFRSELVMAIIDVI 241 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLP 281 ++DM Y S +P+E P Sbjct: 242 QHTDM--------YMPHSNLFPVENYP 260 >UniRef50_P55733 HTH-type transcriptional regulator syrM 2 n=13 Tax=Proteobacteria RepID=SYRM2_RHISN Length = 339 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 21/274 (7%) Query: 15 SSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDP 74 S + + L ++DLNLL EA+ ++ I +AA+ + + A+S+++ +LR +F D Sbjct: 18 SDAARQRRIPNLASVDLNLLVELEALLQYRNITHAAQHVGRSQPAMSRALSRLRDMFNDD 77 Query: 75 LFIRKGQGVTPTAFAMHLHEYISQGLESILGALD-----IEGSYDKQRTITIATTPSVGA 129 L +R G+ PT A E+++Q L S+L A+ G D + +T+A Sbjct: 78 LLVRGSSGLVPTPQA----EHLAQMLPSVLNAIRELVSCSSGLRDLRSKVTMAMPDHQSL 133 Query: 130 LVLPVIYRAIKTHYPQLLLRNPPISD-AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDN 188 ++LP + + P + + P+ D A +L Q + D I + L+ D Sbjct: 134 VLLPYLLPRLGERVPHVDIVTEPLLDGALRRLEQGEIDFAIGQIGAAPPGYLRRGLYADR 193 Query: 189 MVLICREGNPLLSLEDDRETIDNAAHVLLLPEE-----QNFSGLRQRVQEMFPDRQINFT 243 + R +P L E T H + + Q + GL V+ P Sbjct: 194 FTCLLRHDHPALEQEWSVGTFAALRHASIASDSNEGLGQVYDGL---VRFGLPG---PIV 247 Query: 244 SYNILTIAALVANSDMLAIIPSRFYNLFSRCWPL 277 N+LT A +VA +D++ +IP+R + PL Sbjct: 248 VSNVLTAAVVVAMTDLVLMIPNRVATRVATMLPL 281 >UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H854_SHEPA Length = 303 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 73/313 (23%), Positives = 145/313 (46%), Gaps = 32/313 (10%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +DLNLL +F + K AA++L+L+ A+S+++++LR F D LF+R G+ P Sbjct: 1 MSQLDLNLLKVFRVLIEVKNTRKAAEILHLSQPAVSRALRRLRDYFGDELFVRSAHGLEP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T+ A+ + + + ++ + AL+++ ++ Q +TIA + ++P + +A+ Sbjct: 61 TSKALVIGSRLPEAMDQLFEALNVKEEFEPQFYSGKVTIAVNGFIAHWLVPPLIKALTEK 120 Query: 143 YPQLLLRNPPISDA-ENQLSQFQTDLIIDNMFCTNRTVQ--HHVLFTDNMVLICREGNPL 199 P + + ++ +++ + L I N F T Q L +D+ V++CR+ +P Sbjct: 121 APNMEIYMANWEESTSDKIINGEIQLAI-NYFPLELTKQLIQEKLGSDDFVVLCRKDHPF 179 Query: 200 LSL---EDDRETIDNAAHVL-LLPEEQNFS-------GLRQRVQEMFPDRQINFTSYNIL 248 +D A+H++ E +NF+ G + RVQ ++N ++ Sbjct: 180 QKEVIGAEDFPKYPLASHIVPGWNETKNFTVEALKKLGYKPRVQ--LSSSKMNIILSSLE 237 Query: 249 TIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP---- 304 L+ S +LA S + + P L + DF++ Y S R+P Sbjct: 238 LTDMLLPCSKLLAKTLSDRFRIIDID--------PELEQPSSDFALIYANKSRRNPLDEW 289 Query: 305 ILHGVIDVIRNAF 317 + VID + + F Sbjct: 290 LQQCVIDCVNSKF 302 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 5/250 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ++DLNLL +F+A+ + AA+ LNL+ A S+++ +LR DP+F+R G+G+ PT Sbjct: 4 DMDLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGRGLVPTP 63 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 FA+ + LE G L +++ +RT I A + P + R P Sbjct: 64 FALRAAPQVRSLLEGAQGLLIDRKNFEPAELERTFVIRINEGTAASLTPALVRRFAAEAP 123 Query: 145 QLLLRNPPISDAE-NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL-SL 202 ++R + + + L DL I + V +L+ + V + + +PL + Sbjct: 124 NAVIRCVGEGNEDVDSLRNGSIDLDIGADPLPSSDVCSEILYREGHVGLVSKSSPLARTA 183 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 + + HV + + + + R++ + + A + A+SD++A+ Sbjct: 184 QPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVASPVAAALMAADSDLVAL 243 Query: 263 IPSRFYNLFS 272 +P R F+ Sbjct: 244 VPERLARYFA 253 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 20/286 (6%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL + + + AA+ L L+PSA+S+++ +LR DPL +R G+G+ PT A Sbjct: 5 DLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVPTPRA 64 Query: 90 MHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALV---LPVIYRAIKTHYPQL 146 + L E + +++ AL D +R + + T + V P + + P + Sbjct: 65 LELREQVGPLVQAAEAALRPVEKLDLERLVRMYTLRTSEGFVENFGPDLIARVAEQAPGV 124 Query: 147 LL--------RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 L + P+ D L +T ++ T ++ LF D + + R G+P Sbjct: 125 RLCFVQKSNKNSAPLRDGSVDL---ETGVVGK---ATAPELRVQALFRDRFIGVVRMGHP 178 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L E H+L+ + + + ++ + +RQI T L SD Sbjct: 179 LSQGEMTPHRYATGKHILVSRRGFDRGMIDEALKPLGLERQIVTIVSGFSTALVLARASD 238 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 ++A +P R + P P + +I S+H++ DP Sbjct: 239 LIASVPERHTAKLRAG--MHSFPLP-IATPEITVSLHWHPRMDADP 281 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 16/305 (5%) Query: 20 PQIF-TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 P IF + N DLNLL +F+ + + + AA+ L LT +S ++ +LR DPL +R Sbjct: 21 PYIFGMNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVR 80 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVI 135 G+ + PT A+ L I L+ I L ++ QR+ + IA T V L +P + Sbjct: 81 VGRRMRPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPL 140 Query: 136 YRAIKTHYPQL---LLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLI 192 ++ P + ++ P AE L + DL++ H + + + Sbjct: 141 LARLELLAPNVRIDVVHLAPNLPAEA-LDRGDLDLVLGRFDEVPARFTRHPWRRETLQIA 199 Query: 193 CREGNPLL--SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTI 250 R+ +P L D + H+ + Q + Q + E RQI +T+ N L Sbjct: 200 LRQQHPHLVPGQALDLDAFLGLRHI-WVHGGQTRGMVDQWLAEQGLTRQIAYTTPNYLQA 258 Query: 251 AALVANSDMLAIIPSRFYNLFSRCWPLE--KLPFPSLNEEQIDFSIHYNKFSLRDPILHG 308 A L A +DM ++P + F+ PL +LPF E + + + DP L Sbjct: 259 AHLAAATDMCVVLPRQLAQQFAHLLPLAVYELPF---ALEPFELEVVHLSHRQHDPALAW 315 Query: 309 VIDVI 313 +++ I Sbjct: 316 LVEQI 320 >UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C5CVL6_VARPS Length = 327 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 7/263 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDL+L+ + V + + AA L + A+S ++++LR + DPL +R G G+ PT Sbjct: 9 KIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGSGMVPTD 68 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDKQRTIT---IATTPSVGALVLPVIYRAIKTHYP 144 + + E + L + ++ Q T IA + + L LP++ +K P Sbjct: 69 AGLRMIEPAASILRAAEMLFSDARGFEPQSAATTFRIAASDYMDPLFLPMLVAHVKREAP 128 Query: 145 --QLLLRN-PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 Q+ + P SD L+ Q DL+I N + LF D +V + + +P + Sbjct: 129 LCQIEIHALTPDSDYHGHLALGQVDLVIGNWLKPPEDLHMARLFGDEVVSLVNQDHPAVR 188 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSG-LRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 D ET A H+ P G + Q + E+ R I + I +VA+S ++ Sbjct: 189 RGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFSLIPDMVASSLLV 248 Query: 261 AIIPSRFYNLFSRCWPLEKLPFP 283 ++ F+ P++ L P Sbjct: 249 LTTGRQYCERFAARLPVKILECP 271 >UniRef50_A5L763 Transcriptional regulator n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L763_9GAMM Length = 301 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 56/250 (22%), Positives = 118/250 (47%), Gaps = 5/250 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++ +LNL+ F A+Y + AA+ LN++ ++S +++LR + D LF+RK + P Sbjct: 1 MKRFNLNLIYYFIAIYEEGNLTYAAERLNISQPSLSAHLKQLRDEYRDLLFVRKSYTLEP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIKTH 142 T A L+ Q + + +L ++ + T IA +++LP I I+ Sbjct: 61 TPVANDLYPIFKQAHKLVSHSLPETHDFEPKECSYTFRIAAMSISSSVILPQILDRIQEE 120 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P+ ++ I D + + + DL++D + + T+ ++ D + ++C + + ++ Sbjct: 121 APECVIEVVNIKEDMATDIREKKIDLVVD-LTNAHPTLLSQEIWGDELCMVCSQNHSQIN 179 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + E +A HV+L + + L + +F DR++ +I + + NSD +A Sbjct: 180 EQVTLEQYLSAKHVMLTHDNYRVNQLTEFHSPIFADRKVARKLNSIADFSDTIYNSDWIA 239 Query: 262 IIPSRFYNLF 271 P N + Sbjct: 240 TFPKGVANAY 249 >UniRef50_C6C4P6 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C6C4P6_DICDC Length = 325 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 28/307 (9%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +DLNL +FEA+Y G AA L +T SAIS ++ ++R I+ D LF R G+G+ P Sbjct: 6 IETMDLNLFKVFEALYEEGGAGRAALRLGVTQSAISAALGRMRNIYGDRLFERTGRGLRP 65 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A LH IS L +L + S + RT+T+ + + + + Sbjct: 66 TRRADELHPIISDALNKCRQSLSMANSVGDEFQGRTVTMGWSDDYEIALARTLTNQVAAE 125 Query: 143 YP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 YP +L+ R A + L + DL I ++ + VL G Sbjct: 126 YPGIRLIFRQTHSRVAADMLMERAVDLAISTEGFSSSILGRQVL----------GGGSYA 175 Query: 201 SLEDDRETIDNA---------AHVLLLPEEQNFSGL-RQRVQEMFPDRQINFTSYNILTI 250 L D+R +A H+L+ F G+ + + + R+I ++ + + Sbjct: 176 CLLDNRPDAPDALTLEEYIRRRHILV--SSGGFIGIVDEALAALGLQRRIEVSTTHFAAV 233 Query: 251 AALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVI 310 L+ S+ L +P+ + L LP P L + + +LRDP + V Sbjct: 234 PYLLKGSESLVTLPAHAAYPIAAIADLRVLPCP-LVLPGYAIELGWRLDALRDPAVVAVR 292 Query: 311 DVIRNAF 317 ++ F Sbjct: 293 QAVQCVF 299 >UniRef50_Q1GIZ4 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GIZ4_SILST Length = 317 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 17/278 (6%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 I +L +F VY K + AA VL + S IS +I+KLR + D LF++ G+G+ P+A Sbjct: 8 QISGRVLRVFLTVYDEKSVSRAADVLESSQSTISHNIEKLRGLLGDALFVQSGRGIVPSA 67 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A L + + L + G D +G YD IA + S+ L IY A++ P Sbjct: 68 RADVLAPKVRRILIEMEGLAD-QGIYDPITDPDPFVIALSSSILDGELETIYDALRLSLP 126 Query: 145 Q--LLLRN-PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN---P 198 Q L+ R+ +S+ E L Q D+++ + H+ T + + + N P Sbjct: 127 QKHLMFRDLGKLSEIEPLLETRQADVVLTLRPRSYPNTLRHMALTQDSFRVFYDPNVRGP 186 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + S+ED A H + + + S L+ ++ + R++ N+ T+ L+ +D Sbjct: 187 VDSVED----FCGAPHATVSFGQGSKSLLQTELEALAIHRRVTLGVPNLWTLIRLMQGTD 242 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFP-SLNEEQIDFSIH 295 M+A +PSR + L PFP L Q D H Sbjct: 243 MIASLPSRSSRHTTGT--LASSPFPVELPPLQFDLVWH 278 >UniRef50_D0ZGN3 Transcriptional regulator n=2 Tax=Edwardsiella RepID=D0ZGN3_EDWTE Length = 310 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 75/314 (23%), Positives = 148/314 (47%), Gaps = 20/314 (6%) Query: 11 LSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVI 70 L R ++GK + ++D++++ F V + + AA++L+ + ++IS++++K+R Sbjct: 4 LLRWPTKGKNML-----DVDVSVIRTFLTVMDTRSVTLAAELLDSSTASISRALKKMRDA 58 Query: 71 FPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGAL 130 F DPLFIR QG+ PTA A ++ ++Q L +I A ++ + S+ L Sbjct: 59 FNDPLFIRTKQGLEPTALAYNITPNLAQALNNIQNAANLTNGIHQGDRRQTRLKLSMSPL 118 Query: 131 VLPVIYRAIK-THYP---QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHV--- 183 + + R ++ HYP L+ D +S+ ++ ID F + + Sbjct: 119 LEFYLTRLLQHYHYPFDSVALMTETHDGDLTRDISRLRSR-KIDISFTPQKYADWMITNV 177 Query: 184 -LFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQIN- 241 +F ++CR G+P + T+D A L + L + + + P R+ Sbjct: 178 PVFDVQPAVLCRVGHPRIG---PGFTLDQLAQEDYLSLTM-WPSLFEDDEVLNPHRKAPI 233 Query: 242 FTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSL 301 ++S ++L + +VA+SD + + RF F+R ++ L P ++ HY+K Sbjct: 234 YSSSSLLNLMMMVASSDYILLCGKRFAQEFARLVEIQVLDHPQGRSMGTIYA-HYHKSRT 292 Query: 302 RDPILHGVIDVIRN 315 DP + +ID++R Sbjct: 293 TDPCIIELIDILRT 306 >UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=A8FYY5_SHESH Length = 331 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 18/277 (6%) Query: 18 GKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFI 77 G + L +DLNLL +F A+YVH+ + AA+ +NL+ SA S ++ +LRV D LFI Sbjct: 26 GMKIMHNRLHRLDLNLLKLFSALYVHRNVSVAAESMNLSQSAFSHALARLRVQLDDELFI 85 Query: 78 RKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPV 134 R + PT +A +HE +++ L ++ + + + + A T L++P Sbjct: 86 RSRAQMIPTRYADSIHEPVAEVLSTLGSCFAPQTHFIPHESRHEFNFAVTDFTALLMMPR 145 Query: 135 IYRAIKTHYPQLLLRNPPISDAEN-QLSQFQT---DLIID-NMFCTNRT--VQHHVLFTD 187 + ++ H P L+R S +E L+ F+ D + + F +T + + + D Sbjct: 146 LMAHLERHAP--LVRINLTSRSEKLPLAAFEAGELDFALGYSHFDEVQTPLINQWIWWED 203 Query: 188 NMVLICREGNPLLSLED-DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYN 246 I + LE D +T + H+L+ P + + +++ + R I N Sbjct: 204 CYCTIASD-----KLERMDLKTFLSRRHILVSPWGEKIGVVDEQLSKQGLQRDIALQLPN 258 Query: 247 ILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 ++ +VA S++L +P P+++ P Sbjct: 259 VMNAPFVVAGSELLLTLPKFAAQALQGALPVKRFDVP 295 >UniRef50_Q4KCL9 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=Q4KCL9_PSEF5 Length = 311 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 18/301 (5%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ++DLNLL FEA++ AA L +T SA+S ++++LR ++ DPLF+R G+G+ PT Sbjct: 8 SVDLNLLKAFEALHDESSASRAALRLGVTQSAMSAALRRLRELYGDPLFVRTGRGLAPTL 67 Query: 88 FAMHLHEYISQGLESILGALDIEG--SYDKQ-RTITIATTPSVGALVLPVIYRAIKTHYP 144 A L +S+ L +L + + D Q R++T+ + + A+ P Sbjct: 68 KANQLKPVVSEALNKCRQSLAMVAPDTADYQGRSVTLGLSDDFEIAYGRQMIEAVARRAP 127 Query: 145 QLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC-----REGN 197 +L L R L Q DL I R + VL + + + G Sbjct: 128 KLRLIFRQSHSQIVAEALLQRSVDLAISAGGFAERLLSRQVLGEGHYLCLADPASLAPGQ 187 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLR-QRVQEMFPDRQINFTSYNILTIAALVAN 256 +SLE + A LL Q F G+ + + + RQ+ ++ + + L+ Sbjct: 188 QQISLE------EFVAREHLLVSSQGFIGITDEGLANLGLSRQVCASTTHFAALPFLLKG 241 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 S +A IP+ + L+ LP P L + + + DP+L V + I + Sbjct: 242 SQAVATIPAHAARRIAELTGLQLLPCP-LALPRYPIELGWRTSPQTDPLLVKVREAIVES 300 Query: 317 F 317 F Sbjct: 301 F 301 >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 5/255 (1%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +IDLNLL +F+A+ AA+ + LT A+S ++ +LR +F DPLF+R +G+ T Sbjct: 8 SIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSPRGMVATP 67 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYP 144 A+ I LE + L +++ + R + + ++LP + ++ P Sbjct: 68 AALDAAPAIRSILEQVEVVLSGGPAFEPEESTRQFVLGLSDYAAFVLLPRLTARLEREAP 127 Query: 145 --QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 L++RN L + +LI N ++ +L+ ++ V R +P L+ Sbjct: 128 NISLVIRNTSHGVGLPMLEEGSVELIAGNFPGPPSHMREELLYEEDFVCAGRGDHPALAY 187 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 D + + H+ + + + E R++ T + L LV +SD++A Sbjct: 188 PLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVTVGHFLMAPFLVDSSDLVAT 247 Query: 263 IPSRFYNLFSRCWPL 277 P R + PL Sbjct: 248 EPRRLFEPMPSRLPL 262 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/277 (23%), Positives = 118/277 (42%), Gaps = 23/277 (8%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL + + + + AA L +T A+S +++LR +F DPL +R +G+T T Sbjct: 6 VDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGMTATER 65 Query: 89 AMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L + L I A+ + + + QR I + + ++P + R I+ P Sbjct: 66 ARELQPLVRGILSDIEQAVQEKTPFAAGESQRVFRIMASDYAESCLMPRVLRRIRQEAPH 125 Query: 146 LLLRNPPISDAEN-QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + L SD + Q + D+ I+ ++ L+T+ + NP+L Sbjct: 126 VTLDVLTPSDVSFLDVEQGRLDMAINRFDKIPQSFHQKTLWTEYFACLMNARNPILKEPF 185 Query: 205 DRETIDNAAHVLLL-----------PEE-QNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 +T +A+H+ + P++ Q + + + M RQI+ + + Sbjct: 186 TLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALGRMGRKRQISVFTRHYQVAML 245 Query: 253 LVANSDMLAIIPSRFY-------NLFSRCWPLEKLPF 282 L D++A +PSR NL + P E PF Sbjct: 246 LAEQHDLIATLPSRAAWLQKDNPNLVVKVPPFEIPPF 282 >UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q1R0T8_CHRSD Length = 308 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 14/267 (5%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +R IDLNL+ F +Y + AA LN+T ++S S+ +LR +F DPLF R G+ P Sbjct: 1 MRPIDLNLVRTFVTLYESGSVTLAAHKLNVTQPSVSYSLSRLRELFDDPLFSRTRDGMAP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T AM L+ Q L I L +D QR +A T +L I R ++ Sbjct: 61 TFCAMRLYTSFRQALTQIEQTLSDAQHFDPEQSQRRFRLALTDLGETTLLAPILRHMRDL 120 Query: 143 YPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ-----HHVLFTDNMVLICREGN 197 P + L P+ + + +S F +D + C +R +Q + + V + + Sbjct: 121 APGVELEVVPL-EIDKVVSWFDNK-SVDAVIC-SRDIQAPSLGRRPIIEERYVGLLGRRH 177 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRV-QEMFPDRQINFTSYNILTIAALVAN 256 P + E HV + P + GL + V +E R+++ + + L+ + Sbjct: 178 PRIGQTLSMEAFSREDHVQVSPTTGH--GLVEDVLKERDITRKVSVVVPHFSALPRLLES 235 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFP 283 + +LAI+P + LF++ L+++ P Sbjct: 236 TSLLAILPEQIAGLFTQQADLKQVELP 262 >UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z947_9NEIS Length = 330 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 137/305 (44%), Gaps = 28/305 (9%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LR +DLNLL F+A+ + + AA L L A+S ++ +LR + DPLF+R G + Sbjct: 10 ALRRLDLNLLVAFDALMQERHVSRAAARLFLGQPAMSHALARLRQLLDDPLFVRSGSRME 69 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKT 141 PT A L + LE L ++D T +A + AL+ P + ++ Sbjct: 70 PTPRACELAPQVRAWLEQAQQFLFRADAFDPAAAHATFRLAAPDGMEALLYPALIATLRR 129 Query: 142 HYPQLLLRNPPISDAENQLSQF---QTDLIIDNMFCTNRTVQHHV-LFTDNMVLI-CREG 196 P + LR+ + + + QL+ + DL+I R + LF + + + R Sbjct: 130 DAPGVRLRS-QLLETDQQLAALDHDEVDLLITAAPLALRDWHSRLRLFKSDFISVHSRRQ 188 Query: 197 NPL---LSLEDDRETIDNAAHVLLLPEEQNFSGLRQR-VQEMFP----DRQINFTSYNIL 248 PL +L D + + HV+ ++ G V +F +R++ S ++L Sbjct: 189 LPLPEPATLAD----LASCDHVV-----SSYRGTAAGVVDHLFAAHGLERRVQVLSASLL 239 Query: 249 TIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHG 308 I +VA + +++I P+ + LFS L P P E +I + +++ + R P+ Sbjct: 240 AIGHIVAQAPLMSIQPAIYRGLFSTTPELACAPLP--GEARITVGLVWHRRNDRHPLHRY 297 Query: 309 VIDVI 313 + D + Sbjct: 298 LRDTV 302 >UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Tax=Gammaproteobacteria RepID=YIDZ_ECO24 Length = 319 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/296 (23%), Positives = 139/296 (46%), Gaps = 25/296 (8%) Query: 44 KGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESI 103 + + AAK +N+TPSA+S+S+ KLR F DPLF+ G++PT + + + +++ ++ Sbjct: 23 RSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMS 82 Query: 104 LGALDIEGSYDKQRTIT--IATTPSVGALVLPVIYRAIKTHYPQ--LLLRNPPISDAENQ 159 LD + + R + +A + ++L + + I YPQ + LRN D+ + Sbjct: 83 NLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKRIYQRYPQATIKLRNWDY-DSLDA 140 Query: 160 LSQFQTDLIIDNMFCTNRT----------VQHHVLFTDNMVLICREGNPLLSLEDDRETI 209 +++ + D+ R+ + + VLF+D + R+ +P L + +T Sbjct: 141 ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWNLDTF 200 Query: 210 DNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD--MLAIIP--S 265 H+ + E+ + L +QE+ +R I + + A D +LA P Sbjct: 201 LRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYC 260 Query: 266 RFYNLFSRCWPLEKLPFPSLNEEQ----IDFSIHYNKFSLRDPILHGVIDVIRNAF 317 ++YN + PL LP P +Q + F++ ++K + +P + + + I+N + Sbjct: 261 QYYNQLHQL-PLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 >UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B54141 Length = 298 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 15/285 (5%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL + +A+ + AA+ L +P+A+S+++ +LR DPL +R GQG+ PT Sbjct: 1 MDLNLLRVLDALLQENSVTRAAERLGTSPAAVSRTLARLRRTVGDPLLVRAGQGLVPTPR 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ L E + + L +D QRT T+ T + + + I PQ Sbjct: 61 AVELREEVGALIRGCDNVLRPGAGFDAVHLQRTFTVQATDLLLVGLAGSLTERIHAEAPQ 120 Query: 146 L-LLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + ++ P + L Q D+ + + + ++ L +V I R G+PL Sbjct: 121 VDVVFLPEAVEGGPGLRQGLVDVELGVLGHLDPEIRTRRLTRMPLVGIARTGHPLFDGRI 180 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI-- 262 D A H+ + + + + E+ R+ + + L ++D++A+ Sbjct: 181 DARRFAAADHIGISRLGKRLGPIDSALAELGLRRRTAVVVPSHTSAMMLARDTDLVALSL 240 Query: 263 ---IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 IP + R +P+ L+ E +D + ++ + DP Sbjct: 241 ADWIPDTIAAMGLRAFPV------PLDLEPLDLGMAWHPRNSADP 279 >UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=C5A8T0_BURGB Length = 313 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 50/74 (67%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ++DLNLL +FE ++ G AA L+LT SA+S ++++LR ++ DPLF+R G+G+ PTA Sbjct: 8 DVDLNLLKVFEVLFDEGGASRAAIRLDLTQSAVSAALRRLRALYGDPLFVRTGRGLAPTA 67 Query: 88 FAMHLHEYISQGLE 101 A L I + L+ Sbjct: 68 RARELKPLIGEALD 81 >UniRef50_B9QU66 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QU66_9RHOB Length = 307 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 116/239 (48%), Gaps = 13/239 (5%) Query: 43 HKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES 102 H+ ++ A L LT SAISQ++++LR +F D LF+R+ G+ PTA A+ L I+ +E+ Sbjct: 28 HRKAMDVAHELGLTQSAISQALKRLREVFGDELFLRRPHGMEPTATALALQAPIANAVET 87 Query: 103 ILGALDIEGSYDKQRTIT----IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPIS--DA 156 + AL + ++D RT T +A + A+++P + ++ P L L P +A Sbjct: 88 LRQALGVARAFDP-RTATGQVRLAAMHAEQAVLIPALAARLRNTAPGLDLSVVPRGRREA 146 Query: 157 ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP-LLSLED--DRETIDNAA 213 L + DL + +T + VL+ D ++ G+P LSLE + ET Sbjct: 147 MQSLQDGEVDLALGFFRNVPKTCRAEVLYEDTYLVA---GSPQTLSLETPLNLETYCAMD 203 Query: 214 HVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFS 272 H+L P Q + ++++ R++ + A A SD L +P+R F+ Sbjct: 204 HILTSPSAQLHGVVDTHLEKLGRQRRVVLGLPAFVPALAAAAASDALITLPARVAEAFA 262 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 10/280 (3%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +D+ LL +F+A+ + + AA + LT SA+SQ + +LR IF DPLFIR G+ PT Sbjct: 9 TLDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRTANGMEPTP 68 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A+ L +++ L + + ++ +R +A + + LP + R I+ P Sbjct: 69 HALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVVRRIREIAP 128 Query: 145 QLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 L + + + ++ DL + + LF + + + NP L Sbjct: 129 NLRITIVHVGPRGGQREIESGSADLALGVFQQPPIGISTCELFRYTLQCVADKNNPRLKQ 188 Query: 203 ED-DRETIDNAAHVLLLPEEQNFSG--LRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 R+ A+H+ + E N G + V+ + R+I + + ++I LV +D+ Sbjct: 189 GTMSRDEYLEASHIAV--GENNVPGTLVEVIVEALGLKRKIALVTPHFVSIPNLVLGTDL 246 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKF 299 + PS + + L P P E I ++ + +F Sbjct: 247 IGTFPSSAQDAYPFSNQLCFFPIPFPISESIAMAMWHPRF 286 >UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q471I4_RALEJ Length = 323 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 10/285 (3%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 + LN L + + + + + AA+VLNLT A+S+++ +LR F DPLF+R G + PT Sbjct: 11 ELSLNQLLVLDVLLSERSLTKAARVLNLTQPALSKTLARLRQYFGDPLFVRVGLRMEPTP 70 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A+ L + + L+S+ +D QR+ + + + +LP + + P Sbjct: 71 KALELADPVRGILQSVRALRSDHVGFDPRTSQRSFSFFLLDAGASQMLPPLLSRLAEEAP 130 Query: 145 QLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 +L++ N + + L DL I + ++++ +L+ + + R+ +P L+ Sbjct: 131 GILVQAVNADATHLDIWLENGLVDLAIGSFPGLTQSIRRQLLWHETYGAVVRKDHPRLAQ 190 Query: 203 EDDRETIDNAAHVLLLP---EEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 D + HVL+ Q+ S + + ++ P I + T + +SD Sbjct: 191 LGDLDAFVAEKHVLVSAVGTGHQHLS-IERAIEAAVPHTNIICRVPSFATAGLIAKHSDA 249 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 +A++P + L + P L +D + H++ R+P Sbjct: 250 VAVLPLTLARALCKDLDLTVV-MPPLTLPGMDIAQHWHDRVHREP 293 >UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=Q7MFJ9_VIBVY Length = 314 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 71/291 (24%), Positives = 137/291 (47%), Gaps = 30/291 (10%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR+IDLNLLTI E + +HK I AA+ LN++ A+S+++ +LR F DPL ++ + Sbjct: 8 LRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVNREYRL 67 Query: 86 TAFAMHLHEYISQGLESILGALD---IEGSYDKQRTITIATTPSVGAL------VLPVIY 136 TA EY+ + LES L + ++ ++D + A ++GAL ++P + Sbjct: 68 TAKG----EYLRRELESSLNTIRQMLVDDAFD---PLQYAGVFTIGALDFEMMMIVPKLL 120 Query: 137 RAIKTHYPQLLLR------NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMV 190 + P+L L+ P+ D +++ DL++ + + V LF DN Sbjct: 121 ARFQQRAPKLKLQIVPYNAYMPLHDYLEKVA----DLLLYSTDDSPTNVFKQRLFNDNYA 176 Query: 191 LICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTI 250 ++ + + L + E + HV++ + + ++ R++ + + + Sbjct: 177 VVMCQNHVLANQPMTLERYCRSRHVIVSGNGLGKTDIDHELKRRNQQREVVASLPHFSMV 236 Query: 251 AALVANSDMLAIIPSRFYNLFSRCWPL--EKLPF--PSLNEEQIDFSIHYN 297 L+ N+D++A +P R + S + + +LPF EQ IH++ Sbjct: 237 PELLINTDLIATLPRRLVSHLSHRYEITVAELPFYTADFQVEQFWHLIHHS 287 >UniRef50_Q0VH46 Putative LysR type regulator n=3 Tax=Proteobacteria RepID=Q0VH46_9PSED Length = 308 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 6/280 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL FEA++ + AA L +T A+S S+++LR + D LF G+ + PT FA Sbjct: 11 DLNLLFAFEALWRDHSVSIAADNLGVTQGAVSSSLKRLRQEYGDRLFTVVGRRMEPTPFA 70 Query: 90 MHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVG-ALVLPVIYRAIKTHYPQL 146 + + + + L+ + A +E S R + T +G A+ LP I + ++T P Sbjct: 71 VQIAPTLLEALDLVREAQSRALEFSPQHCRKVFTVRTRDIGEAVCLPTILKMLQTQAPMS 130 Query: 147 LLRNPPISDAEN--QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + S E LS + DL I + + ++ + + V R G+PL E Sbjct: 131 RINTVASSVEETLIGLSTGRIDLAIGYLPTLKTDIHRTIVSSQHYVCALRRGHPLADAEL 190 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 E H+L+ L + + E I L+ L+ SDML ++P Sbjct: 191 TLERFLAQQHLLVETGGTGHVLLERALIEAGARHNIGVRIPQYLSAPHLLLESDMLWVVP 250 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 + SR +PL P P + E D +++++ RDP Sbjct: 251 NVLGKTLSRFFPLLLKPLPLVLPE-FDIALYWHDRFHRDP 289 >UniRef50_Q16B23 Transcriptional regulator, LysR family, putative n=2 Tax=Roseobacter RepID=Q16B23_ROSDO Length = 304 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 24/270 (8%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +ID LL +F V+ K + AA L + S IS S++KLR DPLF++ G+G+ PT Sbjct: 8 SIDGKLLKVFLTVFQEKSVTKAACALGTSQSTISHSLEKLRHCVGDPLFVKSGRGIAPTN 67 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPV---IYRAIKTHYP 144 A L + + + + G L ++ Y ++ T T + +LPV + +AI+ P Sbjct: 68 VAAALAPKVCRIISELEG-LAMQSEYCPRQDTTTLTITTNVTELLPVLIPVKQAIRQAAP 126 Query: 145 QLLLRNPPISDAENQLSQFQTDL----IIDNMFCTNRTVQHHVLFTDNMVLI--CREGNP 198 + +R + N LS L I ++ + + D+ V C + N Sbjct: 127 DVTIRFTDLGARTNALSVLANGLADVAITASIGPYPLELAIDQYYKDDFVCYFDCEQRNA 186 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRV-----QEMFPDRQINFTSYNILTIAAL 253 D E A H +L +F G + + + R+I+ + N +A L Sbjct: 187 ----PDTVEAYGKARHAVL-----DFGGATKSIVDAALENAGQTREIHLAAANSYALAKL 237 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 + +D++A +P R + + PFP Sbjct: 238 ASGTDLVATLPKRLRATAFKGFAYVTPPFP 267 >UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP1_SORC5 Length = 312 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 133/300 (44%), Gaps = 21/300 (7%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L ID+NL+ +A+ + + AA+ + L+ A+S ++ +LR +F DPL IR G+ + Sbjct: 3 LSAIDVNLVIALDALLQERSVTLAARRVGLSQPAMSHALTRLRELFSDPLLIRVGRQMAL 62 Query: 86 TAFAMHLHEYISQGLESILGAL-DIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKT 141 T+ A + ++ + + G + ++D R IA T V +++P + A+ Sbjct: 63 TSRAEAMTPQVTAIVHDLAGLFGETTPTFDPATSDRAFRIAATEYVELVLMPRLNAALAQ 122 Query: 142 HYPQLLLRNPPISD-AENQLSQFQTDLIIDNMFCTNR---TVQHHVLFTDNMVLICREGN 197 P+L L P+ A + L + DL I +F ++ LF D + R + Sbjct: 123 GGPRLALHLLPLDGRAVDALRSGEIDLAI-GVFPQESLPPDLRRAPLFDDRFAGLARMSH 181 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI----NFTSYNILTIAAL 253 P + D +T HV ++P G+ ++ R I T ++L + Sbjct: 182 PTARGQVDLQTYAALPHV-VVPRRGAHDGV---ADDLIAARGIARHEAMTVPHVLLVPHA 237 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPI---LHGVI 310 + SD++A + +R FS PL P I+ ++ +N + RDP L GV+ Sbjct: 238 ITASDLVATVATRLGRAFSSLVPLRTFDLP-FELPPIEIAMAWNSRTERDPARAWLRGVV 296 >UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0K340_BURCH Length = 303 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 23/290 (7%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +DLNLL +A+ + I AA+ LNL+ SAIS + KLR F D L + G+ + T Sbjct: 5 RLDLNLLVTLDALLDDRRITRAAERLNLSQSAISGMLAKLREYFDDELLVPVGRNLELTP 64 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A L + + L + + I+ +++ +R IAT+ V +++ + I+ P Sbjct: 65 LARELVQPVRDLLLQVQTIVAIDPAFEPANARRHFKIATSDYVINVLMHRLIPVIEPLAP 124 Query: 145 QLLLRNPPISDAENQLSQFQTD-LIIDNMFCTNRTVQHH--VLFTDNMVLICREGNPLLS 201 L L P DA +L + + D LII F + H LF D+ V + GN + Sbjct: 125 YLTLELMPQEDAPERLRRGEYDFLIIPEPFKAD---DHPAIALFDDSYVGVVWNGNRAVG 181 Query: 202 LEDD---RETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 D E +D+ A +L P ++ + V+ R++ T+ + ++A ++ + Sbjct: 182 ASIDVARYEQLDHVATLLGWPRLPSYDS--RYVEAQGIRRRVRVTTSDFTSMAPVLIGTQ 239 Query: 259 MLAIIPSRFYNLFSRCWPLE----KLPFPSLNEEQIDFSIHYNKFSLRDP 304 M+A + R +R PL + P P + E + ++++ +DP Sbjct: 240 MIATMHRRLATELTRRMPLRLVELEFPIPQMRE-----FLQWHEYREKDP 284 >UniRef50_Q1T7B6 Putative LysR-type transcriptional activator n=1 Tax=Pseudomonas sp. HI-70 RepID=Q1T7B6_9PSED Length = 312 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 88/168 (52%), Gaps = 6/168 (3%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 + + LR IDLNLL F+A+Y + I AA+V+ L+ A+S ++ +LR + D LFI+ Sbjct: 5 RSKTMIDLRQIDLNLLLAFDAIYAQRSITRAAEVMCLSQPAMSNALSRLRSLSGDRLFIK 64 Query: 79 KGQGVTPTAFAMHLHEYISQGLESIL-GALDIEGSYDKQRTITIATTPSVGALVLPVIYR 137 +GVTPT A L +++ L+S+ G +I +++ + I+ + +L + Sbjct: 65 SHRGVTPTMVAHRLADHVRNALDSLREGLREIPSAHEHNPVLRISCPDYLQPQLLKALID 124 Query: 138 AIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLF 185 + H+ + DA ++L+ + D+++D ++ +Q H + Sbjct: 125 EQQNHW-HVRYYQTRRRDAFDELASGKLDILVD----IDQPLQRHTML 167 >UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQN8_HALO1 Length = 302 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 5/246 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L +D+NLL +A+ + + AA + L+PSA+S+ + +LR +F D L +R G + P Sbjct: 7 LHAVDMNLLVALDALLTTRSVTRAAGLAGLSPSAMSRVLGRLRDLFEDELLVRVGHELLP 66 Query: 86 TAFAMHLHEYIS---QGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTH 142 TA A + + + E +L S + R +T+ T + LVLP + ++ Sbjct: 67 TARAQQVQPRLRVLLRDTEQLLSPPATSASEFEGR-LTVLLTEHLAKLVLPSLLVCVREE 125 Query: 143 YPQLLLR-NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P+L L P E+ L Q L +D + + ++Q LF + + + R +PL+ Sbjct: 126 APRLALDVRHPGPYPESALQQGDAVLWVDVTYEPDPSLQAVALFAEPYLSVVRCEHPLVG 185 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + HV + S + ++ R + T + +A +V D ++ Sbjct: 186 TPVGLDDWVAYPHVSVSVRGWGRSDVDIMLERAGRTRHVALTVHAFALVADVVVCGDYVS 245 Query: 262 IIPSRF 267 +P+R Sbjct: 246 TMPARL 251 >UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=Betaproteobacteria RepID=C4KB22_THASP Length = 333 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 65/293 (22%), Positives = 127/293 (43%), Gaps = 20/293 (6%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +LR+ DLNLL + AVY + AA+ L L+ +S ++ +LR +PLFI+ GVT Sbjct: 23 SLRDFDLNLLRVLLAVYEAGSVSRAAEHLGLSQPTVSSALGRLRRALGEPLFIKTASGVT 82 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALV-LPVIYRAIK 140 PTA L L + + +D + +T+A + VG LV LP I +++ Sbjct: 83 PTARTHALASSARAMLARLETDFFVADRFDPAKYEGNLTVALS-DVGELVFLPRILDSVR 141 Query: 141 THYPQLLLRNPPISDAE--NQLSQFQTDLIIDNM-------FCTNRTVQHHVLFTDNMVL 191 P +L + ++ E + + DL I F + + H V Sbjct: 142 RLAPLAMLDSVTLAPGELMRAMEDGEVDLAIGYYPDLDAAGFYREKLLDH------RFVC 195 Query: 192 ICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 + R +P+ + E + H + + ++ + ++ + R+I + + +++ Sbjct: 196 LLRADHPVQDRQLSLERFLSLEHAAVRAKGRSQEIFEKYLERLRIQRRIVLRTPHFMSLP 255 Query: 252 ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 ++ SD++ +P + F+R ++ P L I+ H+++ DP Sbjct: 256 GIIGRSDLVVTLPHAIGHYFTRVGEKVRMAEPPLAIPHIELYQHWHRGFHHDP 308 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 15/285 (5%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +D+ LL++F+ +Y + + A + L L +++S ++ +LR F D LF+R +G+ PT Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L + Q LE + A + +D R +A T LP + + P+ Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAPK 120 Query: 146 LLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + + I +D L DL I M + LF D + R +P + D Sbjct: 121 VRVEVLRITADTARLLEAGDADLAIGYMPELDAGFYQQKLFRDGFACVVRRTHPRI---D 177 Query: 205 DRETI---DNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 D T+ HV++ + Q ++ R + + + + L+A++D++A Sbjct: 178 DNLTMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLLAHTDLIA 237 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSI--HYNKFSLRDP 304 +P R + ++ + P E F+I H+++ +DP Sbjct: 238 TVPHRIAQTLVKIAQVKAIASPYRLPE---FAIKQHWHERYQQDP 279 >UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q393U0_BURS3 Length = 310 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 9/279 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR++DLNLL +A+ K + AA + L+ SA+S ++ +LR++ D L IR G+ P Sbjct: 3 LRSVDLNLLVALDALLTEKHVTRAATKVGLSQSAMSSALGRLRILMRDELLIRNATGMEP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTH 142 T A+ L E + Q L L+ +G++D T + + + L++P + ++ Sbjct: 63 TPRALELEEPLRQLLHQAERLLESDGAFDPATTAGHFRLRMSDVLEYLLMPPLLAQLEQE 122 Query: 143 YPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L +S + L D+ + VQ LF D MV + +P Sbjct: 123 APGVTLDVVHLSPGQTVTALEADDIDVAVSMDLEHAGAVQAMPLFDDRMVCVMARDHPCA 182 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + + + H+ + + + ++ M R + + L + L+ +S M+ Sbjct: 183 AEALTLDLFLSLPHLKVSISSTDGRYVDAKLAGMRRARNVVLNVPHWLVVPHLLRHSSMV 242 Query: 261 AIIPSRFYNLFSR-CWPLEKLPFPSLNEEQIDFSIHYNK 298 A++ +R F+ L+ LPF S +S+++++ Sbjct: 243 AVMSARLAERFAADGLVLKALPFESAG---FHWSMYWHR 278 >UniRef50_A1R1P0 Putative transcriptional regulator, LysR family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1P0_ARTAT Length = 314 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 4/124 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 T LR IDLNLL +F + + + AA L++T A+S ++ +LR++F DPLF + G+ Sbjct: 7 TNLRKIDLNLLVVFHVLMQERHVTRAAAKLHITQGAVSAALGRLRLLFDDPLFQKSRTGM 66 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLP-VIYRAI 139 PTA A+ L I Q L+++ + + ++ RT IA + + A+ +P ++ AI Sbjct: 67 VPTAKALALAPRIGQSLKTVSDLVFQDEQFEPTTSNRTFHIAMSDDLEAVFVPKIVTEAI 126 Query: 140 KTHY 143 ++++ Sbjct: 127 RSNW 130 >UniRef50_D0J6E9 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni CNB-2 RepID=D0J6E9_COMTE Length = 317 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 8/238 (3%) Query: 35 TIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHE 94 +F+A++ H+ +V AA L ++PSA S ++ +LR D LF R G + PT A + E Sbjct: 24 LVFDALFRHRSVVAAADELAISPSACSHALARLREGLGDELFFRSGSSMQPTPRATEMAE 83 Query: 95 YISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLR-- 149 I+ L ++ L ++ ++ T A T ++P + I+ P + LR Sbjct: 84 GITLALHTLSDQLGDPAAFAPGSSTQSFTFAATDFTTFALMPALISRIEHEAPHVRLRVV 143 Query: 150 NPPISDAENQLSQFQTDLII---DNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDR 206 + DA + L Q ++ D V+ TD V++ R G+P + Sbjct: 144 HSRHRDAYSDLVQEGAHFVMGFSDEFSPAQEGVEVLQGHTDAYVVVARRGHPRIGKRLSM 203 Query: 207 ETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 HV++ P ++ + + + R+I +++ +VANSD+L +P Sbjct: 204 AQYLAERHVVVKPWQEEKGVIDSALSKGGWTREIAIELPSVMAAPFIVANSDLLITLP 261 >UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM2_9RHOB Length = 313 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 5/189 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L DLNLL + +A+ + AA + L+ A+S ++ +LR D LF+R+GQG+ Sbjct: 3 LAGFDLNLLKVLDALLRERSTTRAAARVGLSQPAVSAALGRLRAALGDELFLRRGQGLVA 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T FA L + + L+ + L +D +RT +A +++P + + Sbjct: 63 TDFARALEAPLRETLDRLEDLLAAPQEFDPATAKRTFRLAGIDFFAEMLMPQLAARLAAA 122 Query: 143 YP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P ++ L N + E L +++ D+ + + + +H +LF VL GNP L Sbjct: 123 APGVRIQLLNLVPREYEATLERYEADVALFPLTGSPEWAEHRLLFRSPFVLAAAAGNPRL 182 Query: 201 SLEDDRETI 209 + + +T+ Sbjct: 183 AHLAEGDTV 191 >UniRef50_C9D2D7 Transcriptional regulator, LysR family n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D2D7_9RHOB Length = 384 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/285 (28%), Positives = 129/285 (45%), Gaps = 18/285 (6%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + I +L +F VY K + AA VLN + S IS +I+KLR + D LF++ G+G+ P Sbjct: 70 ISQISGRVLRVFLTVYDEKSVSRAADVLNSSQSTISHNIEKLRGLLGDALFVQSGRGIVP 129 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 +A A L + + L + G D +G YD IA + SV L IY A++ Sbjct: 130 SARADALAPKVRRILIEMEGLAD-QGIYDPITDPDPFIIALSSSVLDGELQTIYTALRAS 188 Query: 143 YPQ--LLLRN-PPISDAENQLSQFQTDLIID-NMFCTNRTVQHHVLFTDNMVLIC--REG 196 PQ L+ R+ + E L Q D+++ + T+ H L D M + + Sbjct: 189 LPQKHLIFRDLGKQTQIEPLLETRQVDVVLTLRPRSYSNTLCHMTLSQDTMRVFYDPKIR 248 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 P+ S+ D +A+H + + S L+ ++ + R+I N+ + L+ Sbjct: 249 GPVESIAD----YCSASHATVAFGQGRKSVLQTELEALAIHRRIILGVPNLWMLIRLLQG 304 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFP-SLNEEQIDFSIHYNKFS 300 +DMLA +P+R L PFP L Q D H +FS Sbjct: 305 TDMLASLPARAARNTEGI--LASSPFPVELPPNQYDLVWH-RRFS 346 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 8/265 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L+N+DLNLL +F+A++ + + A ++L ++ A+S ++ +LR +F DP+F+R + P Sbjct: 3 LKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEMRP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGA-LVLPVIYRAIKT 141 T A L + + L I + +D +RT+T+ P +G LP + + Sbjct: 63 TDRASELMPSVERVLSMIRDDVLQPVGFDPAANRRTLTLC-MPDIGEQYFLPPLINHLAQ 121 Query: 142 HYPQLLLRNPPISDA--ENQLSQFQTDLIIDNMFCTNRTV-QHHVLFTDNMVLICREGNP 198 P + + + ++ A E L + DL I R V LF R+G+P Sbjct: 122 VAPGMAVVSHELAPAQLEEALESGRVDLAIGYFPDLRRAVFYQQRLFYSGFCCAVRQGHP 181 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + A HV ++ Q ++E R + + + L++ ++A +D Sbjct: 182 QIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIVRNVKLQTSHFLSLTQIIAQTD 241 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFP 283 +LA + L + P P Sbjct: 242 LLATVTYEAAQLLQAAGKVHIYPVP 266 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/271 (22%), Positives = 117/271 (43%), Gaps = 9/271 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +DLNLL +F+A+ + + AA+ + LT A S ++++LR F D + + G+ + P Sbjct: 3 FKGLDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRMHP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD----KQRTITIATTPSVGALVLPVIYRAIKT 141 T FA LH I Q L + A+ + +D +R I + + A+++P+I R +T Sbjct: 63 TPFAEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFART 122 Query: 142 HYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 + P + +L + DL++ VLF + V++ NP+ + Sbjct: 123 APGVRIEIIQPNEHSVAELEAGRADLLVTPEPFLASWHPSEVLFDEEQVVVGWAQNPIFA 182 Query: 202 LEDDRETIDNAAHV-LLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + A HV + + + + M +R++ T + + + + L Sbjct: 183 RGVTADDFYAAGHVTVAFGANRTPAFADSALSRMGRERRVEVTVGSFASAPWFIEGTSRL 242 Query: 261 AIIPSRFYNLFSR----CWPLEKLPFPSLNE 287 A++ R +R W FP++ E Sbjct: 243 AVLHERLVRQIARRFNLAWARMPFDFPTMQE 273 >UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0RZK6_ACICA Length = 303 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/283 (24%), Positives = 136/283 (48%), Gaps = 19/283 (6%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL +F A+Y HK + AA+ L ++PSA S ++ +LR DPLF+R + PT + Sbjct: 12 DLNLLLVFNALYQHKNVAKAAETLFISPSAFSHALNRLRDTLQDPLFVRMNGEMKPTKKS 71 Query: 90 MHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTHYPQL 146 + IS L ++ L +D + IA T V+P++ + ++T P + Sbjct: 72 EEIAPSISNCLSTLSQNLFKNSDFDYATSDYEFVIAATEYTAFSVMPLLVKHLRTIAPNI 131 Query: 147 LLR----NPPISDAENQLSQFQTDLIIDNMFCTNRTVQH---HVLFTDNMVLICREGNPL 199 ++ N S E L + D +I + + H F D V+I + N Sbjct: 132 KIKIISENKQCSIDELMLGKI--DFVIGYSELSEGSPNHLEVFQCFADRYVVIAPK-NIY 188 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 S+ + E+ +A H+ + +++ + Q +++M RQI +++ ++ ++++ Sbjct: 189 QSM--NLESFISAQHIRVSSWNEHYGVIDQSLKKMGIRRQICVEVPHVMLAPYMMQSAEL 246 Query: 260 LAIIPSRFYNLFSRCWPLE--KLPFPSLNEEQID-FSIHYNKF 299 + +P + + + ++ +LPF S+ E Q++ +S+ +K Sbjct: 247 IVTLPLKAVDAIKKNHEIDIFELPF-SVPEYQVNVYSVEKSKL 288 >UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V5Q0_PSEA7 Length = 308 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 114/272 (41%), Gaps = 29/272 (10%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 IDLNLL F + + AA VL++T A+S ++++LR F D LFIR G+ PT Sbjct: 12 IDLNLLLTFHCLMSERSATRAAVVLHVTQGAVSAALRRLREHFGDELFIRSASGMQPTRK 71 Query: 89 AMHLHEYISQGLESILGALDIE---GSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 AM L I++ L SI G L E +D IA + + + + P I A Sbjct: 72 AMELAPRIAEALTSISGVLAAEPEFSPHDSSYVFNIALSDDIESYLAPCIVNAAAA---- 127 Query: 146 LLLRNPPISDAENQ-----LSQFQTDLIIDNMFCT-----NRTVQHHVLFTDNMVLICRE 195 +S A +Q Q D +D + C+ N + VLF+ + + R Sbjct: 128 ---EGLGVSFAFHQSNSSLWKQSLLDPDMDLVICSEPKDFNTSYSSQVLFSSSYSCLFRP 184 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPD----RQINFTSYNILTIA 251 + + A HV + ++ G R + ++F R++ + + Sbjct: 185 RGSMAGAAIGLDDYFAANHVRI-----SYDGRRGFIDDLFESAGYARRVTASFTHFAGAL 239 Query: 252 ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 + + + +++A +P+ +SR L P P Sbjct: 240 STLMSGEVIATLPTFAAETYSRMMDLHCCPVP 271 >UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=Proteobacteria RepID=Q0BCW3_BURCM Length = 342 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 20/263 (7%) Query: 35 TIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHE 94 F+A+Y H+ + AA L ++PSA+S ++ +LR D LF+R G + PT A + Sbjct: 49 LAFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGNEMQPTVRADDIAT 108 Query: 95 YISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNP 151 + L+++ L +D RT A + VLP + I+ P+L +R Sbjct: 109 WAGDALDTMSKGLARARRFDPAQSDRTFVFAASDYTAFAVLPALLARIERVAPRLRIR-- 166 Query: 152 PISDAE-----NQLSQFQTDLII---DNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + +E ++L+ + D + + + ++ F+D+ V+I +P + Sbjct: 167 -VVHSERKISIDELAAGRIDFALGYHEESTADSPGIEDFDWFSDDYVVIASAAHPDIR-- 223 Query: 204 DDRETIDN---AAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 R T+D A HV++ P ++ + + + RQ+ ++L +A S +L Sbjct: 224 -RRLTLDQYLAARHVVVTPWNESRGVVDYVLDRLGLARQVAVRLPSVLAAPFAIAESTLL 282 Query: 261 AIIPSRFYNLFSRCWPLEKLPFP 283 +P+R P+ P P Sbjct: 283 MTVPNRAAQALRHAAPIRIFPAP 305 >UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRT9_PARL1 Length = 315 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +R +DLNLL +F A+Y + I AA L +T A+S ++++LR D LF + G GV P Sbjct: 3 IRELDLNLLLVFNAIYTERSISKAAVKLGITQPAVSNALRRLRNFTGDTLFYKSGSGVAP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A L I L+++ L S+D +RT I + ++P + + Sbjct: 63 TRAAATLAIPIGHALDTVERGLSSVRSFDPATSRRTFRIGVNDIIHDALVPALVGYTRRE 122 Query: 143 YPQLLLR-NPPISD-AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL- 199 P L+L + D A L + D+ + F + ++ ++ D+ +I +P+ Sbjct: 123 APNLILEFVQQVGDRALEMLKGGEIDMALLPNFAIDDSLVSTKVWDDSFAIIVARNHPIA 182 Query: 200 ----LSLEDDRE 207 L+++D RE Sbjct: 183 KSNRLTVDDIRE 194 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 16/204 (7%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR +DLNLL + +A+ + AA+ L ++ A+S+++ +LR+++ DPL IR QG+ P Sbjct: 3 LRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGMEP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---------QRTITIATTPSVGALVLPVIY 136 TA A E + L IL DIE ++ + + I V +++P + Sbjct: 63 TARA----EALLLPLREILH--DIEQTFSPPEQLDPAQFEGVLRIGAHTYVEYVMMPSLL 116 Query: 137 RAIKTHYPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 ++ P L + P+ +D E+QL + ++I + LF D ++ Sbjct: 117 ARLQQQAPNLRIHMVPLNADYESQLDEGVISMVISKQDEVPGRFRRIPLFEDKLICAAHR 176 Query: 196 GNPLLSLEDDRETIDNAAHVLLLP 219 +PL E+ A H+L+ P Sbjct: 177 SHPLQGQVLCIESFAQAQHLLVAP 200 >UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IJ97_AZOC5 Length = 324 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 18/269 (6%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +R D LL +F + AA+ L LT S +S ++++LR + DPLF R+ G+TP Sbjct: 8 IRRFDGALLLVFRELMATGQTTAAARRLGLTQSTVSHALRRLRDLTGDPLFQRRPDGLTP 67 Query: 86 TAFAMHLHEYI------SQGLESILGALDIEGSYDKQRTITIATTPSVGALVL--PVIYR 137 T A L + SQ L+ G D S R IA P + + VL P+ +R Sbjct: 68 TPRAHELLPIVVEMLRLSQALKGEPGEFDPAAS---TRHFRIA-GPDIVSTVLAGPLAHR 123 Query: 138 AIKTHYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 H P L I A L + + D+ I + R L+ + V I R+ Sbjct: 124 -FAQHAPNARLSFGFIVGAAALEALRRGEIDMAIGHFPSVPRGFAASTLWEEEFVAIARK 182 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRV-QEMFPDRQINFTSYNILTIAALV 254 G+P D + AA +L+ F+G+ RV Q + R++ + L++ V Sbjct: 183 GHPRFPPLDLAGYL--AADHVLVSFSGRFTGVVDRVLQPLGLARRVVASFPLFLSVFDAV 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 A SD +A +P + + L +LP P Sbjct: 241 AQSDAVAAVPYSLCERHAETFGLARLPMP 269 >UniRef50_C3KNK2 Transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNK2_RHISN Length = 316 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 13/256 (5%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L NIDL LL +F+A+ + AA L ++ A+S ++ +LR++ D LF+R +G+ P Sbjct: 5 LANIDLKLLVVFDAMMAEGSVSRAAARLGMSQPALSNALNRLRLLLNDRLFLRTAEGMRP 64 Query: 86 TAFAMHLHEYISQGLESILGALDIEG--SYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 T A+ + I + I AL+ +D T ++A + ++LP++ I Sbjct: 65 TPRAIEISGPIQSAMRQIEEALEPTAFEPHDPDWTFSLAVSDHASVVLLPLLIEHIARVA 124 Query: 144 PQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P++ L ++ P + L + DL + + R +H +F D + + R+G+PL Sbjct: 125 PRVTLNIQSRPNEELPALLDNGEIDLAVGVIPNLPRRFKHMAVFEDKYLCMMRQGHPLAG 184 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 E A + + P + S + + + E R++ T + L A+V+ SD++ Sbjct: 185 RPITLEEFLAADQLSVKPGISDISRVDRLLAEAGLKRRVATTVHQFLAAPAIVSRSDLIV 244 Query: 262 II---------PSRFY 268 ++ PSRFY Sbjct: 245 LVFEKMVPIFDPSRFY 260 >UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLW1_SORC5 Length = 315 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 119/251 (47%), Gaps = 4/251 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L +IDLNLL + +A+ + AA + L+ SA+S ++ +LRV+ DP+ +R +G+ P Sbjct: 18 LASIDLNLLVVLDALLAEGSVTRAAARVGLSQSAMSHALGRLRVLIDDPVLVRTPRGMIP 77 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A L I + L I + ++ +R+ T+AT V ++LP + + + + Sbjct: 78 TPRAQELIGPIREALAKIEATVARSPRFEPATARRSFTVATVDYVELILLPRLVQKLVSE 137 Query: 143 YPQL-LLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + L+ P S+ + + + DL I + L + + + R +P + Sbjct: 138 APFIDLVARPYDSEMWSAMETGKVDLAIGLLPALPAGFYRQRLIEERYMCVVRRSHPAVR 197 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + +T + H L+ P + + + + E R++ + L A +VA +D++ Sbjct: 198 GKLTLKTYTSLPHALISPRGEGGGRVDEVLAERGLSRRVALQIPHFLVAAHIVAQTDLVL 257 Query: 262 IIPSRFYNLFS 272 +P+R +F+ Sbjct: 258 TVPARIARVFA 268 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 31/310 (10%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 R DLNLL F A+ + + AA+ L L A+S ++++LR F D LF+R QG+TP Sbjct: 22 FRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLRETFGDELFVRTPQGMTP 81 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L I L+S+ AL +D QR I + S+ L++P I + Sbjct: 82 TPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSDSLELLLMPEIMARLAAA 141 Query: 143 YP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHV-LFTDNMVLICREGNP- 198 P +L+ R+ + A L +L + +F Q + LF+ V + NP Sbjct: 142 APGVKLIARSTDSTRAAAMLDDGAIELAV-GVFRECVPWQRLMPLFSWRFVSVY---NPQ 197 Query: 199 LLSLEDDRETID---NAAHVL--LLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 L+ ++D HVL E + F R +Q + +R++ F+S N T + Sbjct: 198 LVRTRRKHLSMDEFLRHRHVLTSFSAELRGFIDERLELQGL--NREVVFSSSNFATSPFI 255 Query: 254 VANSDMLAIIPSRFYNLFSRCW------PLEKLPFPSLNEEQIDFSIHYNKFSLRDPILH 307 V + +A +P R W L LPF E S+ + +DP L Sbjct: 256 VQRTAAIATVP----EFIGRVWRDTLGLALSPLPFEVPGYE---VSLMWAAAHDQDPALA 308 Query: 308 GVIDVIRNAF 317 + +AF Sbjct: 309 WLKREFADAF 318 >UniRef50_Q5DZ29 Transcriptional regulator, LysR family n=2 Tax=Vibrio fischeri RepID=Q5DZ29_VIBF1 Length = 287 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 18/278 (6%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNL+ F AVY + A+++L LT A+S +I++L LFI+KG+G+ T+ Sbjct: 1 MDLNLVRTFMAVYQCQSYTKASELLMLTQPAVSAAIKRLESEIGKQLFIKKGRGIEATSK 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLL 148 A L L++I A++ DK + +LV Q+ Sbjct: 61 AHALATKFQFALDTINDAVN-----DKNTLSVYCAEIILHSLV----------GLEQINF 105 Query: 149 RNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDR 206 P S + L + + DL++D + + + +V++C + +P + E + Sbjct: 106 AESPRSQSMLFEHLREQKVDLVLDVATMKDSAFVIEDAYVEPLVVVCAKNHPRIQGELTK 165 Query: 207 ETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSR 266 +HV+ Q +G Q QE +R I T ++ ++ V+ D L ++ Sbjct: 166 VDYYRESHVIYSALWQGMNGFEQIAQEPVEERNIALTVSSLSSVLMFVSQGDSLGLVSQS 225 Query: 267 FYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 F + + L P P + + + Y+K + DP Sbjct: 226 FAKRWEKQLNLAIYPCP-VKLDNAKYKFIYHKRYINDP 262 >UniRef50_Q1YUH5 Nodulation protein d1 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUH5_9GAMM Length = 306 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/253 (22%), Positives = 114/253 (45%), Gaps = 9/253 (3%) Query: 44 KGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESI 103 K + +A+ L+L+ A+S ++++LR F DP+ + G+ + T A+ +H+ + L S+ Sbjct: 21 KSVSRSAERLHLSQPAMSAALRRLREYFNDPILKQHGKRMVSTPHALIIHQELKVVLASV 80 Query: 104 LGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQ- 159 + +D R TI + + ++ + R ++ P + L P +D+ ++ Sbjct: 81 EALISKTAFFDPATTSRKFTITASDYLAQVIFVPLIRHLRNVAPNIQLEIVPPADSTHEL 140 Query: 160 LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLL-L 218 LSQ DL+I + +LF D V++ + NP E + HV++ L Sbjct: 141 LSQGSIDLVILPEQMISDEFPSELLFEDRFVIVGCQSNPAFQQAMTEEAFYTSGHVVVKL 200 Query: 219 PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLE 278 + S Q+++ R + + L +V +D L ++ R N+F+ P+ Sbjct: 201 GSRRPISVSDQQLESRKKSRDTDILVGSFLLAPEMVVGTDRLTVMHERLANIFATRVPIV 260 Query: 279 KLP----FPSLNE 287 P FPS+ E Sbjct: 261 TAPLPFSFPSIKE 273 >UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ61_9GAMM Length = 302 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 9/266 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR++DLNLL + +A+ + + AA+ LN++ A+S+++Q+LR DP+ +R G G Sbjct: 3 LRSVDLNLLVVLQALIDEQHVSKAAERLNMSQPAVSRALQRLRTTLQDPILVRTGSGYDL 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVG---ALVLPVIYRAIKTH 142 +A A+ L E +S L + + E +D + + + L++P + R ++ Sbjct: 63 SARAVVLREQLSHVLHEVQAIMQPE-QFDPMQAEGVLKLTGLDLELILLMPDVIRMLREK 121 Query: 143 YPQLLLR-NPPISDAENQLSQFQTDLIIDNMFCTNRTVQH---HVLFTDNMVLICREGNP 198 P L + P + + L + I +F Q+ + T ++ ++ R+ NP Sbjct: 122 APNLRVEVVPQLPEHFELLERGDVHFTITGLFPQTHHDQYRRIEIARTGHVCVMDRD-NP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L E + NA+H L+ + + + E R++ N +++A SD Sbjct: 181 LAKGELSLQDYANASHGLVSITGKGPGMMDDALGEFGYKRKVMLRLANFMSVAQFCQQSD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPS 284 ++ +P ++ L P P Sbjct: 241 LIFTLPKIMATHLAQGTSLVLRPLPK 266 >UniRef50_Q2NRV1 Putative transcriptional regulator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NRV1_SODGM Length = 199 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 6/177 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 F L +DLNLL +FEA+Y + A K LN ++S ++ +LR++F D LF+R G Sbjct: 12 FMNLSAVDLNLLVVFEALYETGNVTLAGKRLNRAQPSVSNALGRLRLLFQDELFVRTAGG 71 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT----ITIATTPSVGALVLPVIYRA 138 + PT A L I+ L+ + L+ + ++D R T+A + +++P I R Sbjct: 72 MVPTEKAQTLIPAIAAILDQLRNTLNRDSAFDPDRAHGRRFTLAASDYADIVLIPHIVRR 131 Query: 139 IKTHYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 ++ P + L + QL Q D+ I + ++ L+ ++ V I Sbjct: 132 LRRLAPGIDLHLCTLDRERIYTQLDNAQVDIAIGGHLTPPKRMRVVPLYREDFVCIA 188 >UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKM3_HALO1 Length = 307 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 104/253 (41%), Gaps = 6/253 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L I+LNLL +A+ + + AA+ ++ A+SQS+++LR IF D L R + Sbjct: 6 LSEINLNLLVSLDALLTERSVSRAARRTGVSQPAMSQSLRQLRAIFDDALLARDRGVLVL 65 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A L + L ++ LD E +D +R TIA +LP + Sbjct: 66 TPAAERLMVPLRHALVAVQRVLDGEKPFDPGRAERRFTIAVGDFAAVTLLPPLLERASRE 125 Query: 143 YPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + P +L+ + DL+I + +L+ D V + R +P L Sbjct: 126 APGIGFDVRPAEPTRLFERLATGEFDLVIGAKLDASGDFMRQLLYRDGFVCMARRDHPEL 185 Query: 201 SLED-DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 S + D E HVL+ P + S + + + E R+I L +V SD+ Sbjct: 186 SGDALDLERYAALPHVLISPTGEGPSVVDRLLAERGKQRRIALRIPYFLAAPLMVVRSDL 245 Query: 260 LAIIPSRFYNLFS 272 + P F+ Sbjct: 246 VLTAPRSVAGAFA 258 >UniRef50_B7RWY7 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWY7_9GAMM Length = 327 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 16/184 (8%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNLL + + + + AA+ L +T A+S+++ +LR +F D LF R G+ P Sbjct: 6 LAKIDLNLLISLQVLLEERNVSRAAERLFITQPAMSKTLSRLRAVFDDALFTRSSHGMQP 65 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L + +++ L I G L + +++ IT+A + +G +LP + + ++ Sbjct: 66 TPRALELTDRLTEILSGI-GQLVSKQAFNPALIDTEITLALSEYIGVALLPTLAKRLQMQ 124 Query: 143 YPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHV-------LFTDNMVLICRE 195 P L LR ++ ENQL Q + F + QH+ L + VL+ RE Sbjct: 125 APNLHLR--IVTRVENQLEQLALGKLD---FAVHIRHQHYSPDFRTIDLGSSPPVLLIRE 179 Query: 196 GNPL 199 +PL Sbjct: 180 NHPL 183 >UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMY5_VEREI Length = 304 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/299 (24%), Positives = 131/299 (43%), Gaps = 14/299 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR IDLNLL F+A+ + + AA+ L L+ SA+S ++++LR F D L +R +G+ P Sbjct: 3 LRQIDLNLLVTFQALVEERNVSRAAERLALSQSAVSHALKRLRNTFQDELLVRGPRGMEP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L + GL +I A+D + S+D T ++ T V ++ + ++ Sbjct: 63 TPRAVTLAIAVKSGLATIETAVDEKRSFDPATCHSTYYLSVTEYVRPFIMAHMCAYVREA 122 Query: 143 YP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P +L+ +P + ++ + + ++ N ++ LF D + R +P Sbjct: 123 APHVRLVFESPDEHQVGSAVAYEGLQIRLADL-PVNGPMESMRLFDDTFAVAMRREHPFA 181 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E E AH+ + S + + + R + N L +V +D++ Sbjct: 182 EQELTLEKYLQLAHIKV--TGVGSSAIDRALTARSLVRDVVVKMPNWLEALEVVECTDLV 239 Query: 261 AIIPSRFYNL--FSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +P+ + L RC P P + ID + H S DP + + +R AF Sbjct: 240 VAMPNHWTRLGRLPRC--CITRPLPLALQMPIDAAWHPRNSS--DPAHVWLRETVRQAF 294 >UniRef50_A6CVD4 Transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CVD4_9VIBR Length = 325 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 3/122 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 N+DLNLL +F+ +Y K + AA+ L ++ A+SQS+QKLR F DPLF++ G+ PT Sbjct: 8 NLDLNLLRVFKVLYEEKNMRKAAERLYVSQPAVSQSLQKLRHQFDDPLFVKVKSGLAPTP 67 Query: 88 FAMHLHEYISQ---GLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYP 144 F+ L + +E+++ D+ + ITIA + S + +YR + H P Sbjct: 68 FSEQLSSSLLPLLYDIENVVNDSDVFDPAQLDQDITIALSSSFVFSISGELYRYFREHAP 127 Query: 145 QL 146 L Sbjct: 128 GL 129 >UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=B2JSH4_BURP8 Length = 309 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 77/301 (25%), Positives = 142/301 (47%), Gaps = 17/301 (5%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 N DLNLL IF+A++ H + AA+ L L+ A S ++++LR D LF++ G G+ PT Sbjct: 10 NFDLNLLRIFDALWRHGHLGKAAEELTLSQPAASYALKRLREELGDVLFVKTGSGMQPTP 69 Query: 88 FAMHLHEYISQGLESILGALDIEGSY--DK-QRTITIATTPSVGALV-LPVIYRAIKTHY 143 A+ L + L I + ++ DK QRT TIA + VG +V LP + + + + Sbjct: 70 RAILLAPVVQSVLADIRERVLKAPNFVPDKAQRTFTIALS-DVGEMVSLPRLLQRVTSLA 128 Query: 144 PQLLLRNPPISDAENQ----LSQFQTDLIID---NMFCTNRTVQHHVLFTDNMVLICREG 196 P + + +S A Q L + + DL I ++ + QH L + V + R+ Sbjct: 129 PSVNVTT--VSFAPKQLLSSLQRSEVDLAIGYFPDLDGVDVFQQH--LVRHSFVCLVRQN 184 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +P + ++ H ++ E + + Q ++E R+ + + L+I +A Sbjct: 185 HPAVQGRLTKKLFCELPHAVVQVEGRRQEIVEQFLKENGIRRREVLHTPHFLSIPMTIAM 244 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +D++ + S +F+R LE L P + D + ++++ DP + ++R Sbjct: 245 TDLVVTVSSDVGEIFARIAELEILD-PPYKMPRFDVNQYWHRSQHDDPGNRWMRGLVREL 303 Query: 317 F 317 F Sbjct: 304 F 304 >UniRef50_O67145 Transcriptional regulator (LysR family) n=2 Tax=Aquificaceae RepID=O67145_AQUAE Length = 306 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 45/307 (14%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 F +++IDL L+ IF VY +K + A+ LN++ S IS ++ L LF RKG+ Sbjct: 7 FHFMKDIDLKLIEIFCYVYEYKSVTKASSELNMSQSTISFHMKNLETQLGQKLFYRKGKT 66 Query: 83 VTPTAFAMHLHEYISQ-------GLESILGALDIEGSYDKQRTITIATTPSVGALVLPVI 135 + PTAFA L+EY ++ LE I G I I + G +LP + Sbjct: 67 LIPTAFADKLYEYATELTNFKRRMLEDITKFSGKNGG-----VIRIGASSIPGNYLLPQL 121 Query: 136 YRAIKTHYPQLLLRNPPISDAEN---QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLI 192 ++ + +SD+++ ++ DL I V +TD ++++ Sbjct: 122 LGEFIENFKGYVNVELRVSDSQDIYEKVINGDVDLGIIGYLPRTNKVDAIKFYTDRILIV 181 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTI-- 250 GNP LED T++ ++ L+ E SG R V++ ++ ++ NI+ + Sbjct: 182 ---GNP--ELEDKVYTLEELINLPLVIREVG-SGTRSIVEDKLREKGLSLKEMNIVAVCN 235 Query: 251 -------------------AALVANSDMLAIIPSRFYNLFSRCWPL---EKLPFPSLNEE 288 + +V + L + + ++ +R + L +K P P L +E Sbjct: 236 SNEAVKNTLKYVKGFSFLSSYVVKDDKFLIKLKVKNFDDITRQFYLIRDKKRPLPFLTQE 295 Query: 289 QIDFSIH 295 I F I Sbjct: 296 LIKFLIK 302 >UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q122D0_POLSJ Length = 310 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 114/257 (44%), Gaps = 23/257 (8%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 R +DLNLL + A++ + +A K L+L+ A S ++ +LR F D LF+R G+ PT Sbjct: 4 RQLDLNLLRVLAAIHRTGSVTHAGKALSLSQPATSNALARLRDFFGDELFVRAPSGLKPT 63 Query: 87 AFAMHLHEYISQ---GLESIL-GALDIEGSY-DKQRTITIATTPSVGALVLPVIYRAIKT 141 L + LE+++ G + E ++ D ++++ + L LP + A+++ Sbjct: 64 RLCEQLAPAVLAQLLALETVVTGHEEFEAAHSDMHWRLSLSDLGEM--LFLPALAGALRS 121 Query: 142 HYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC------ 193 P L N ++ D L + DL I + R ++ +LF +N V + Sbjct: 122 QAPGARLSNISVAANDVAAALEAREIDLAIGILQPRQRGIRTELLFRENYVAVASPQWRP 181 Query: 194 ---REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTI 250 R G L + + + AA V+ P + Q + M +I + + + Sbjct: 182 ASGRSGRTLTT-----QQLAEAAFVVASPTATFHGSVEQMLVRMKLQDRIVLRARHFGAL 236 Query: 251 AALVANSDMLAIIPSRF 267 L +D+L+I+P + Sbjct: 237 PDLALATDLLSIVPEMY 253 >UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GFT2_SILST Length = 299 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 64/282 (22%), Positives = 112/282 (39%), Gaps = 6/282 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +D++LL +F AV + + AA+ L + S +S ++ +LR D LF+R GV PT Sbjct: 2 TVDISLLRVFHAVMEERNVTAAARRLGQSQSTVSAALARLRDALGDELFLRARYGVEPTE 61 Query: 88 FAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A+ + I+ GL+ + A +D R + P ++ P + A H P Sbjct: 62 KALQIAPDIAAGLDRLEQAFRAAEPFDPIRSTRRFRLLLGPYAEVVLAPDLAEAFAQHAP 121 Query: 145 QLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + L PI +L+ DL I + LF+D I Sbjct: 122 KAQLELAPIGPDLDPRKLAAQSFDLAIGRFAPPPDDLVVSDLFSDGFRCIVAPAALPEGA 181 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 D + + HV++ P + +G+ + R + LT A VA + +A Sbjct: 182 SLDLDLYETLPHVIVAPPGRWRTGVHKLTAASGLQRNTAVAVSHFLTAAPTVARINGIAT 241 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 +P+R + + + L + P + I ++ RDP Sbjct: 242 VPARIAAMVAAPYGLRNVAVPR-DLGTFPTQIAWHPHQRRDP 282 >UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogoltabida RepID=Q687Z9_9SPHN Length = 318 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 10/260 (3%) Query: 34 LTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLH 93 L IF + V + + AA+ L +T +S ++++LR I D LF R G+ PTAFA+ + Sbjct: 25 LRIFHRMMVDRKVSAAAEALGITQPGVSNALKRLRDITDDELFTRAPGGMEPTAFAIQIA 84 Query: 94 EYISQGLESILGAL----DIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLR 149 E IS L + A D + + D+ R + T A +LP I P + Sbjct: 85 EPISYALAMVDAAFTQPTDFKPASDR-RLFRLGLTDIGEAYLLPKILARTAEIAPHVSFT 143 Query: 150 N--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRE 207 PP S+ ++ DL ID H L + V+ R+ +PL + + + Sbjct: 144 TIRPPKSEIREEMEVGSLDLAIDVFPNMKGNFVHRRLLKEKHVICMRKDHPLAN-KAEWT 202 Query: 208 TIDNAA--HVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPS 265 D A HV+++ + + + R I + L++ ++ ++++A +P Sbjct: 203 MADYIAQEHVVVIAQGTGHGDIDALLARKGISRNIRLMLPHFLSLGPVMHATNLVATLPE 262 Query: 266 RFYNLFSRCWPLEKLPFPSL 285 L + L LPFP + Sbjct: 263 DAALLLEEPYELISLPFPGI 282 >UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUQ0_9GAMM Length = 300 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 62/293 (21%), Positives = 126/293 (43%), Gaps = 22/293 (7%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR++DLNL +FEA+ + AA L ++ A S ++++LR+ D LF+R +G+ P Sbjct: 5 LRSVDLNLFPVFEAIMEQGSLNMAACHLGMSQPAASAALKRLRLTIKDELFVRTRRGLEP 64 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 TA A+ L+ + LES+ G ++ +D +R +A + + + ++ Sbjct: 65 TARALELYPVVHHLLESLRGEMERANQFDPLFCERIFKVAGGDYFDMVFMGRLMNMLRES 124 Query: 143 YPQLLLRNPPISDAENQLSQFQTDL------IIDNMFCTNRTVQHHV----LFTDNMVLI 192 P++ E+ + FQ L +D ++ + H + LF ++M ++ Sbjct: 125 APKV--------QVESVIHGFQESLNLIQRGKLDLCLHYDKEIAHELPTLKLFEESMSVL 176 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 +P + HV+L N + L + +R + ++ ++ Sbjct: 177 MAADHPYADKQLSLSDYIALEHVVLPKLSGNANQLDVILGGFNENRCVRARVSSVSSMVM 236 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPI 305 + S ++ IP+R ++ + L PFP I + + FS +D + Sbjct: 237 AIKQSYLIGTIPTRMASILCEGYDLVFKPFPK-EAPPIPIYLSWAPFSDKDSV 288 >UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A2SDX3_METPP Length = 326 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 12/189 (6%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 +P +F I+L+L+ + V + + AA L T A+S +++LR + DPL +R Sbjct: 3 QPTLFD---KIELHLVRVLHTVITERSVSRAALRLRTTQPAVSAQLKRLRALVGDPLLVR 59 Query: 79 KGQGVTPTAFAMHLHEYISQGL---ESILGALDIEGSYD---KQRTITIATTPSVGALVL 132 G G+ PTA A+ L E ++ L E + G+ ++D + T +A + + L Sbjct: 60 SGTGMAPTAVALQLLEPAAELLRNAERLFGSRAEALAFDPAHSETTFRVAASDYLDPQFL 119 Query: 133 PVIYRAIKTHYPQLLLRNPPIS---DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNM 189 P + ++ P + + P+S D L++ + DL+I N + L +D + Sbjct: 120 PALVTRLRAEAPGIRVEVLPLSAEFDYRKGLARGEVDLVIGNWLRPPAELHLGRLLSDEI 179 Query: 190 VLICREGNP 198 V + E +P Sbjct: 180 VCLVAEDHP 188 >UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax=Burkholderiaceae RepID=PHCA_RALSO Length = 347 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 23/297 (7%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 N+D LL IF + + A+ +++T A+S S+ +LR IF DPLFIR G+TPT Sbjct: 3 NVDTKLLVIFVELLSKRNATYVAEKMHMTAPAVSHSLGRLREIFDDPLFIRVPHGLTPTP 62 Query: 88 FAMHLHEYISQGLESILGALDIEGS------YDKQRTITIATTPSVGALVLPVIYRAIKT 141 A+ L + + L+ L A EG + T I+ ++G + +K Sbjct: 63 KALELGPKVREMLD--LWAAINEGDIATFDPLEAAGTFNISFAGTLGDALFDRFLLRVKR 120 Query: 142 HYPQLLLRNPPISDAENQLSQFQT---DLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P L +R S E ++ ++ DL + + V+ + NM + R+ +P Sbjct: 121 LAPGLQVRLTESSSWEADVAAMRSNELDLAFSPFPTRHPEIVEEVVTSFNMWVCARKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQ---------RVQEMFPDRQINFTSYNILT 249 +L + H+ + Q G R +Q+ R T + T Sbjct: 181 VLKDHCSLDQYLECEHIFI---AQGNPGTRAAPSLIPLDYALQQRGLKRHSTMTVHAWRT 237 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPIL 306 A + A +DM+ + S +L + L P PS E + ++ +++ P+L Sbjct: 238 QAEVAAQTDMIFTVNSLMKDLVCETYNLNAFPLPSELETVLGLNMLWHRSRNTHPML 294 >UniRef50_C9NTB9 LysR-like transcriptional regulator n=5 Tax=Vibrionales RepID=C9NTB9_9VIBR Length = 314 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 25/252 (9%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 R +DLNLL F+A+Y H+ + AAK L+L A S ++++LR + DPLF R G +TPT Sbjct: 8 RRVDLNLLLTFDALYKHRSVSAAAKHLHLGQPATSYNLKRLRELLDDPLFERGGSSMTPT 67 Query: 87 AFAMHLHEYISQGL----ESILGALDIEG-SYDKQRTITIATTPSVGALVLPVIYRAIKT 141 AM + + Q L + I+ E S+D T I + + P ++ ++ Sbjct: 68 TRAMEIEPKVRQILSIFSQDIMPKAAFEADSFDG--TFKIGLSDYAEQVYGPELFDKLQQ 125 Query: 142 HYP--QLLLRNPPISDAENQLSQFQTDLIID-------NMFCTNRTVQHHVLFTDNMVLI 192 P ++L + +S+ L + + DL I + T + H+ DN VL Sbjct: 126 LAPNAKVLFKPVDVSNCVEALEKQEVDLCIGVFSDLPPKVTSTFLYREKHLCIFDNRVL- 184 Query: 193 CREGNPL-LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 G+ L LSL ET +++ ++ + + + M R + S LTI Sbjct: 185 ---GSELPLSL----ETYLATPQMIITASQELTTKVDATLSSMGVKRNVVLGSTRFLTIR 237 Query: 252 ALVANSDMLAII 263 ++ +LA++ Sbjct: 238 RMLTGRRLLAVM 249 >UniRef50_Q5E1I8 Transcriptional regulator, LysR family n=3 Tax=Vibrionaceae RepID=Q5E1I8_VIBF1 Length = 279 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 30/264 (11%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 ++LN + F AVY + AA LN+T ++S +I+K + PLF++ G+ + PT Sbjct: 1 MNLNFIKHFLAVYDFGSVTKAADYLNITQPSMSSAIKKFEESYGQPLFLKVGRSLEPTDA 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYP---- 144 A L + +E ++ AL + R + I + P + LP + A+ T P Sbjct: 61 AHSLAYQVRPIMEQLVMAL------ESPRRL-IVSAPEIVLQSLPDMDDALLTESPAVEY 113 Query: 145 QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP-LLSLE 203 Q+L +++ + D++ID++ T+ T L ++ CR +P +L Sbjct: 114 QML----------DKIRSGEVDILIDDITVTDYTFVTESLGKMDIAFACRNDHPTILGYS 163 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPD---RQINFTSYNILTIAALVANSDML 260 E + A HV+L + +N R E+F R+++ S +L+ V N+D + Sbjct: 164 LSLEQFNQAEHVMLKLKNENVGAFETRPDEIFERNIVREVSGPSNLLLS----VRNTDAI 219 Query: 261 AIIPSRFYNLFSRC-WPLEKLPFP 283 I+ + L + + PFP Sbjct: 220 CIVAESMFGLAQELGLKVLESPFP 243 >UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhodococcus RepID=D0FZR1_9NOCA Length = 311 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 24/234 (10%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR++DLNLL +A+ + + AA+ LNL+ SA+S S+ +LR +F DPL +R G+ + Sbjct: 4 LRSVDLNLLVDLDALLSMRSVTEAARRLNLSQSAMSGSLSRLRRLFDDPLMVRNGRVLVL 63 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A L + + L I G +D + R+ +I+ + A+VL + R + Sbjct: 64 TPRAEALIPPVKEILHQIDGVFAESDDFDPRTTTRSFSISASDYATAVVLAPLLRGLADD 123 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIID-NMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + + P S D L DL+I+ + + LF+D V + Sbjct: 124 APNVTVNVLPRSPDVPAVLRLDSADLVIEPREMMGDSPLPGVSLFSDRWVCM-------- 175 Query: 201 SLEDDRETIDNAAH---VLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 +D + H VL E ++ L V + DRQ+N+ ++ ++ Sbjct: 176 --------LDGSMHEPAVLARLERDHYLQLPHLVYSIGQDRQLNYADRHLASLG 221 >UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SSQ1_AERS4 Length = 322 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 26/282 (9%) Query: 22 IFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 + L IDLNLL I + + + AA+ L+L+ SA+S+++ +LR F DPLF+R Sbjct: 2 LLEQLGRIDLNLLIILQVLLEERNGSRAARRLHLSQSAVSKALGRLRETFDDPLFVRSAY 61 Query: 82 GVTPTAFA---MHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRA 138 G+ PTA A + I L++++ D + + +R IA+ S L P+ Sbjct: 62 GLEPTARALVLQQQLQPILLSLDNLIQPPDFDPA-STEREFVIASMDSAFTLFAPLYLSE 120 Query: 139 IKTHYPQLLLRNPPISD-AENQLSQFQTDL---IIDNMFCTN-------RTVQHHVLFTD 187 +K P + LR ++ + ++SQ Q D+ + +N ++ + +L D Sbjct: 121 LKRQAPGIRLRYEEWTENSLTEMSQGQVDIAFTVRENCISSDFRLDTLPNAICQRLLAID 180 Query: 188 NMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQR------VQEMFPDRQIN 241 ++ + + +P L E + A L P Q + R R + M R+I Sbjct: 181 DLTCLVQHDHPAL-----HEPEWDLARYLAYPHVQTYCEGRDRWMLDHKLAGMDLYRRIE 235 Query: 242 FTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFP 283 T + + +SDM+ + + ++ +PL LP P Sbjct: 236 ATVPSFEAALRMGMHSDMIVTLSRLYARHATQVYPLVPLPLP 277 >UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHX1_PSEF5 Length = 308 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 17/174 (9%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LRNIDLNLL + +A+ K + A L+L+ AIS S+ KLR + DP+ IR+G + Sbjct: 6 LRNIDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGLLDDPILIRRGSELVL 65 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---------QRTITIATTPSVGALVLPVIY 136 ++ A + I Q L ILG IE + K QR T+A + ALVLP + Sbjct: 66 SSLA----QNIQQPLREILG--QIETLFGKSIDFDPASSQRIFTLAMSDYGAALVLPNLM 119 Query: 137 RAIKTHYPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDN 188 ++ P L++ Q+SQ + DL + + + VLF + Sbjct: 120 VRLRRDAPNTTLVVTQDTRHGMFEQVSQGKIDLALGVFPNLSGDISTEVLFEET 173 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 28/257 (10%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR IDLNLL + +A+ + + AA+ L ++ A+S ++ +LR +F DPL +R + Sbjct: 7 LRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRVKSRMQL 66 Query: 86 TAFAMHLHEYISQGLESILGALDIEG----SYDKQRTITIATTPSVGALVLPVIYRAIKT 141 T+ A+ L + L+ + G I G +R + + +VLP + R + Sbjct: 67 TSLALELAPKLQASLDQVRGV--IGGPTFEPVRSRRHFRLGMSDYGAWVVLPALLRQQQA 124 Query: 142 HYPQL---LLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + +++ P + A Q+++ Q D + V+ LF + V +CR Sbjct: 125 LAPGVSFGIVQEPRLETA-RQVAEGQLDCALGVFPLLPEGVRARRLFEERFVCVCRR--- 180 Query: 199 LLSLED--DRETIDN---AAHVLLL----PEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 SL D D ++D A HV + P E+ S L +R RQ+ T + Sbjct: 181 --SLFDRPDGLSLDRYLAARHVRVSLQDNPAEEVDSALEKRGLR----RQVALTLPHFTV 234 Query: 250 IAALVANSDMLAIIPSR 266 AL+A +D++ I R Sbjct: 235 APALLAGTDLVLTIAER 251 >UniRef50_Q7D3Y4 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q7D3Y4_AGRT5 Length = 317 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 11/266 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR+ DLNLL F+A+ + AA+ L + A+S +I LR +F D LFIR GQ + P Sbjct: 9 LRSFDLNLLVAFDAMMEEMSVTRAARRLKIQQPAMSHNISTLRTLFQDELFIRVGQIMKP 68 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 TA A++L + Q L A+ + +++ +QRT + + V L+LP + ++ Sbjct: 69 TARALNLSGPVRQALRQAQAAVLMADAFEPATEQRTFRLGLSSEVELLLLPDLTARLRDI 128 Query: 143 YP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P ++L R ++ L D+ + + + L+ + VL C NP L Sbjct: 129 APGIRILARGGDATEVNAMLDAGVIDMSVGCSYLPDSRHHSEPLYQSS-VLCC--FNPQL 185 Query: 201 SLEDDRETID---NAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + ++D A H ++ + ++ ++ + ++ + + +++ A +S Sbjct: 186 LKVSNPVSLDAYMAAQHAVISQTDSLHGCVKDALEHAGAELEVVAAAPDFMSVLATARSS 245 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFP 283 ++A + SR + LE P P Sbjct: 246 AVIATVSSRIARRYGPLLGLEVSPVP 271 >UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXV6_9VIBR Length = 303 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 112/254 (44%), Gaps = 5/254 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + + +I+L+ L + + ++ K + A + LT SA+S +++KLR F D L IR+G + Sbjct: 2 SNISDIELSQLRLLQIIFETKNLTQAGERAGLTQSAVSHTLKKLRHSFNDSLVIRQGNKM 61 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 T A L + + L + + +D RT IAT+ V ++ P + R Sbjct: 62 VLTPRAESLQTSLGRWLNDFERNILFQEVFDPLTSDRTFYIATSDLVEHILAPHLSRHFG 121 Query: 141 THYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P +++ R +Q+ + D I + T+ + L+ D+ V + R G+P Sbjct: 122 RIAPNIRIVFRKIEKRALASQIESGEVDFAISVIDSTHPNLMVRTLYRDDFVSVVRAGHP 181 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 LL+ + + HVL N + ++ + R + + N + +V +SD Sbjct: 182 LLNSKIKAKDFCQYPHVLASTGNDNRGMVDDALEGLGLSRVMQYKVANFSSAPYIVESSD 241 Query: 259 MLAIIPSRFYNLFS 272 + P F +L + Sbjct: 242 AILTAPRTFVDLIA 255 >UniRef50_Q1Z9L0 Putative transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z9L0_PHOPR Length = 320 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 22/259 (8%) Query: 45 GIVNAAKVLNLTPSAISQSIQKLRVIFP----DPLFIRKGQGVTPTAFAMHLHEYISQGL 100 + + A LNLT SA+S+ + +LR DPLF+R G+G+ PTA A+ L + + L Sbjct: 22 SVSSVATRLNLTQSAVSKQLTRLREQLGGELNDPLFVRTGRGLEPTAQAVKLEQPLRHWL 81 Query: 101 ESILGAL--DIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPIS-DAE 157 +S D + +R I+ + ++V+P++ + P + + S D+ Sbjct: 82 QSSQKMFVPDTFIPAEDKREFQISICETSFSVVVPLLLPKLHRLAPGMKINIVSKSADSL 141 Query: 158 NQLSQFQTDLI-----------IDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDR 206 +L + Q DL+ I + + +H L+ D+ V + R +P+L + Sbjct: 142 QRLREGQLDLLVIAKDTDQRAQISSQVTELKRQSNHELYQDHHVCLLRSEHPILEKKWGN 201 Query: 207 ETIDNAAHVLLLPEEQNFSGLRQRVQEMFP--DRQINFTSYNILTIAALVANSDMLAIIP 264 + +L EE F L Q V E D + +N + A LV ++DM+ + Sbjct: 202 AAFLQVPQIRVLVEENKFWLLDQVVAESGHCLDSKTIVPDFN--SAALLVQHTDMMLVCT 259 Query: 265 SRFYNLFSRCWPLEKLPFP 283 S F ++ + L++LP P Sbjct: 260 SIFARKLAKSYSLQQLPLP 278 >UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RWU1_ALTMD Length = 347 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 17/211 (8%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY 95 IF+A+ I AA L++T A+S ++ ++R + D LF++ G+G+ PT+FA +L Sbjct: 2 IFDAIMTEGAITRAADRLSMTQPAVSNALSRMRTAWNDELFVKDGRGIQPTSFAKNLWSQ 61 Query: 96 ISQG----LESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNP 151 I QG LE + D + K RT IA T ++ ++V + + I+ P + + Sbjct: 62 I-QGPLGELEVAVNPTDFNPASAK-RTFRIAATDNIVSMVWGPLRKVIENEAPGINIHAI 119 Query: 152 PISDAENQ--LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETI 209 P D E L + +L ++ + + V++ R +PL + E Sbjct: 120 PNYDMETDKILKDAEAELTFSKYQEPGSVIRAEHVLDPSWVVVMRPDHPLAKSQLSLEDF 179 Query: 210 DNAAHVLLL-------PEEQNFS--GLRQRV 231 A H+L+ P +Q + GLR+RV Sbjct: 180 VAADHLLVSVTGDVSGPTDQVLANLGLRRRV 210 >UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9F6_RHIL3 Length = 317 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 52/94 (55%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +L IDLNLL F+ + + + AA L T SAIS S+ +LR +F D LF R+ + Sbjct: 5 SLNQIDLNLLRTFDVLMRERSVTRAADRLGRTQSAISHSLGRLRDVFKDDLFTREAGIME 64 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQRT 118 PTA A L E ISQ L I A+D ++D T Sbjct: 65 PTARAKELAEVISQALHEIRVAVDRHLNFDPTTT 98 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +L DLNLL + +A+ K + AA+ L +T A+S S+ +LR IF DPL +R G+ + Sbjct: 4 SLTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGREME 63 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKT 141 T A L + + L + AL E S+D T IA T +LP I R + Sbjct: 64 LTVRARALAGPVREALLMVKAALGSEESFDPAETKCEFRIAMTDYCSMTILPRIVRELSA 123 Query: 142 HYPQLLL 148 P + L Sbjct: 124 RAPGIEL 130 >UniRef50_A6EZR5 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EZR5_9ALTE Length = 306 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 13/254 (5%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 L +DL L + + + A L +T A+S ++KLR F D LFIR G G Sbjct: 1 MNALNRVDLKQLRTLQCLLREGNLSRVADQLGVTQQAVSDQLKKLRATFNDRLFIRSGNG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVG---ALVLPVIYRAI 139 VTPTA+A L + L ++ G L + ++ T T S +LP + + + Sbjct: 61 VTPTAYARTLGPKLDLILNAV-GELLEQDEFNPATTTRTITISSTDLEQKTILPFLMQRL 119 Query: 140 KTHYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + P L L + + + N L DL++ N + L+++ V + + N Sbjct: 120 RREAPGLRLAVKKLELDEMANDLLDGSVDLVLTNPKFAPPSYPSLTLYSERYVCVAGKAN 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPD----RQINFTSYNILTIAAL 253 + I + V++ P +F+G V F D RQ + A Sbjct: 180 EAVRSTMSVAEIASMPQVVVSPSRGDFTGA---VHRWFEDQGHPRQAMLSVPTFTAAKAT 236 Query: 254 VANSDMLAIIPSRF 267 ++ +D++ IPSR Sbjct: 237 ISETDLVGFIPSRL 250 >UniRef50_B0SY67 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0SY67_CAUSK Length = 322 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 5/176 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 +N+DLNLL +F+A+ + A L LT SA+S ++ +LR+ D LF+R G+ T Sbjct: 7 KNLDLNLLRVFDALLEEESATRAGSKLGLTQSAVSHALGRLRLSLGDELFVRGPAGLQAT 66 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 A+ + I L+ + A+ + +D +R + + + ++++P + R I+T Sbjct: 67 PRAVEMGRPIRAALKLMETAVTVP-HFDPAADERVFHVGASAYLCSVLMPGVVRRIQTEA 125 Query: 144 PQLLLRNPPISDA-ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + LR + A L + DL+I + LF + V + R +P Sbjct: 126 PGVKLRIRGVEGALAEDLDHGRLDLVIGGFEHVAPRFAYTPLFKETGVWVIRADHP 181 >UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UEX0_YERRU Length = 299 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 11/267 (4%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +LR IDLNLL I + + + + AAK L ++ A+S ++ +LR + D L +R G Sbjct: 3 SLRAIDLNLLVILDVLLSERHVSRAAKRLYMSQPAVSHALNRLRYLLDDELLVRVAGGFQ 62 Query: 85 PTAFAMHLHEYISQGLES---ILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKT 141 T A L E + + LE I+G + E + QR IA + A+VLP + + ++ Sbjct: 63 LTRRAAALIEPLKEVLEKVRYIIGTGNFEPALATQR-FRIALSDYGAAMVLPGLLQRLRQ 121 Query: 142 HYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P L++ Q+ Q DL + + LF ++ V + + NPL Sbjct: 122 QAPGIDLVVEQASREQMIEQVMAGQLDLALGVFPDLPADMTASRLFEEHFVCVIDQANPL 181 Query: 200 LSLEDDRETIDN---AAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 T+D+ H+L+ ++ + + E+ R++ + L +A Sbjct: 182 --ARKKYFTLDDYLVQPHLLVSMRGESVGEVETALAELGVRRRVAAIMPHFLLAPQALAG 239 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFP 283 +D+L + SR + L++L P Sbjct: 240 TDLLLTVASRVVTIQQESMNLQRLTLP 266 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 8/191 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L IDLNL +F+A+Y + + AA++LNLT A+S ++ ++R DPLF+ G+ P Sbjct: 20 LSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAGMMP 79 Query: 86 TAFAMHLHEYISQGLE---SILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTH 142 T FA ++ + + L+ S + D+ +R ++ + AL+LP + ++ Sbjct: 80 TPFAENIVGRVREALQLLDSSVHEGDVFDPASSERVFRLSMSDLTEALLLPALGELLQRQ 139 Query: 143 YPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + +R+ + E L+ D+ ID + + L D + R+G+P Sbjct: 140 APGMHVRSYTMDRREIATALANGTVDIAIDAPLLGDPHLHQAPLVRDRYACMIRDGHP-- 197 Query: 201 SLEDDRETIDN 211 + D T+D+ Sbjct: 198 -FKGDTLTMDD 207 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 126/264 (47%), Gaps = 13/264 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +R +DLNLL F+A+ + + AA+ L++T A+S + +LR F DPLF+R G+ P Sbjct: 4 IRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHGIEP 63 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTP-SVGALVLPVIYRAIKT 141 TA A+ L + L + L +D Q TI IA+T + A+ P + +K Sbjct: 64 TARALALMPSVKTVLAEVNRMLR-PVEFDPQTAEMTIKIASTDYGLEAIGTPFLSH-LKQ 121 Query: 142 HYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P++ + P D + Q Q + D+ + + + L T++ V + R +P+ Sbjct: 122 LAPKIRVAFLPAQDVDLLAQFEQARIDIALVSTQHIPADLHSKPLLTEHYVCVMRADHPM 181 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGL-RQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + + ++ + F G+ + + ++ R+++ + + + ++ +D Sbjct: 182 ANQLLNLDNFCELDFAMMSYDGGQFYGVCDEALAKLGKTRRVSVSVNHFSLLPNILRTTD 241 Query: 259 MLAIIPSRFYN----LFSRCWPLE 278 ++A+IPSR + L + PLE Sbjct: 242 VVALIPSRLSHHLTGLICKTLPLE 265 >UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SH82_AERS4 Length = 324 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 12/261 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L +DLNLLT+F+ + + + AA+ L+L+ S +S ++ +LR DPLF+ + + P Sbjct: 5 LSRLDLNLLTVFDMLMQERNVTRAAERLHLSQSTVSHALGRLRQALDDPLFVMSRREMMP 64 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A L + Q L + L +D +R IAT SV ++P + + Sbjct: 65 TERAKTLAGPVRQALAMLEQGLRQAEGFDPASARRIFRIATPGSVEHGLVPALVEQLHRQ 124 Query: 143 YPQLLLRNPPISDA--ENQLSQFQTDLIID----NMFCTNRTVQHHVLFTDNMVLICREG 196 P L ++D+ E +L + + DL+I N F + F + +V + G Sbjct: 125 APHCRLEVCELADSDYERELEKGELDLVIGFADANHFSPR--LWREPWFNNPLVCLSPLG 182 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 + L + E + H+ + + + + +R++ + + + L+A Sbjct: 183 SELPEVLGPAELVSR-PHIHTSSWGHSQAMVDLWLARFGVERELGVRLPSFMAVPPLMAT 241 Query: 257 SDMLAIIPSRFYNLFSRCWPL 277 L ++P F R +PL Sbjct: 242 GRYLVVVPEMIGRHFCRYYPL 262 >UniRef50_Q89SA1 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89SA1_BRAJA Length = 305 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 17/259 (6%) Query: 35 TIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHE 94 T +A+ + AA + L+ A S ++Q+LR IF DPL +R G + T A L Sbjct: 12 TALDALLREANVSRAAMRIGLSQPATSHALQRLRDIFGDPLLVRTGARMELTPRAQALRA 71 Query: 95 YISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQLLL--- 148 ++Q L+ + G L + +D +R + L++P + + P + + Sbjct: 72 PLAQALDQVRG-LFVPDEFDAARSERQFRLMMPDLAVELLMPPLMEKVTRAAPNVRVDVV 130 Query: 149 --RNPPISDAENQLSQFQTDLIID--NMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 R P I AE + DL+I N F + +L+TD+ L R G+P+ + Sbjct: 131 PWRGPAIFHAEFART---IDLVISIGNAF---KGFHRQLLYTDSDALAVRRGHPMGAKLK 184 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 RET A HV ++ + + ++ +R I L + A +D++A +P Sbjct: 185 RRETFLAARHVGVIIRGNSEDLIDTWLRAKGIERHIALVVSGYLEALHVAARTDLVAFVP 244 Query: 265 SRFYNLFSRCWPLEKLPFP 283 R SR L+ + P Sbjct: 245 RRLIAALSRQLGLDTVTPP 263 >UniRef50_Q2NZJ9 Transcriptional regulator n=9 Tax=Xanthomonas RepID=Q2NZJ9_XANOM Length = 333 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 14/184 (7%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 I + L + EA+ K ++ A++VLN+T A+++++Q++ I PLF R +GV P A Sbjct: 11 RIKVRHLRVIEALDRQKSLLRASRVLNVTQPALTRALQEIEEIVGAPLFERHSRGVRPNA 70 Query: 88 FAMHLHEYISQGLESILGAL-----DIEGSY-DKQRTITIATTPSVGALVLPVIYRAIKT 141 E + Q +LG L + EG D TIT+ P + +LP + A+ Sbjct: 71 MG----EVLVQTAHVVLGQLRRAQDNFEGLLQDDALTITVGALPVAASGLLPAVLAALYR 126 Query: 142 HYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNR--TVQHHVLFTDNMVLICREGN 197 P L +R + + +L+ + DL++ ++ R + VL+ D + L+ R + Sbjct: 127 TEPTLRVRLLHGRTDELLPKLAGNEIDLVVGRLYPLARYDALIRKVLYQDPIALVARSDH 186 Query: 198 PLLS 201 PL + Sbjct: 187 PLFA 190 >UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T378_KLEPR Length = 321 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 12/180 (6%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 N D N L F A+ + AA+ + L+ SA+S+ I+KL + LF R + VT T Sbjct: 26 NFDFNDLYAFRALMEYGSFRLAAESICLSQSALSRRIEKLETALGNRLFDRTTRRVTLTL 85 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDKQRT--ITIATTPSVGALVLPVIYRAIKTHYPQ 145 + + E Q L + L K RT +T+AT PS +P I R+ + YPQ Sbjct: 86 YGQNFAERSEQLLAHVETVLADISQVSKARTGLVTVATVPSAAYYFMPEIIRSFQARYPQ 145 Query: 146 LLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFT----DNMVLICREGNPL 199 + +R + + + +S Q D + C + + + FT D V CR +PL Sbjct: 146 VRIRLIDSSVGNVIEAVSSGQADFGL----CFAKNLPASIEFTPLADDRYVAACRHDHPL 201 >UniRef50_Q6LMQ1 Hypothetical LysR-like regular protein n=2 Tax=Photobacterium profundum RepID=Q6LMQ1_PHOPR Length = 319 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 7/243 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 R +DLNLL F A+ + + AA L++ SA+S ++ +LR++ DPLF R+G + T Sbjct: 11 RGVDLNLLVAFSALMETRSVTKAAAKLSIGQSAMSHNLSRLRLLLNDPLFERQGHQMIAT 70 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIKTHY 143 A+ L I L ++ + +D Q T I T L P ++ AI Sbjct: 71 QRAIELSSTIENILNLVMTQVLRPDDFDSQHYQGTFRIGLTDYAELLFAPALFDAISRLA 130 Query: 144 PQLLLRNPPISDAENQLSQFQT---DLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P+ L + D N ++ F D++I +M + ++ L+T++ V + + L Sbjct: 131 PKCQLSFCNV-DRHNYINSFNDKNLDVVIGSMTDLPKELESQYLYTEDHVCLFDQSATGL 189 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 ++ L+ P+ + S + ++QE R I S N LTI L+ + ++L Sbjct: 190 TVPVSLARYIITPQALVSPDGKLASPIDNQLQEQGFKRHIALGSSNFLTIRHLLKDRNLL 249 Query: 261 AII 263 ++ Sbjct: 250 CVV 252 >UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=A6VSJ2_MARMS Length = 328 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 13/268 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR IDLNLL A+ V K + AA+ L+ + AIS ++ LR IF DPL +R+ + Sbjct: 23 LRRIDLNLLVTLHALLVEKHVSRAAQRLHKSQPAISHALANLRAIFNDPLLVRRTGKLEL 82 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T+ A L +++ L LGAL + +++ +R +A + +VLP + + +++ Sbjct: 83 TSRANELLPTLTEALHQ-LGALIEQPTFESTQAKRVFRLAMSDYGSRVVLPGLIQILRSR 141 Query: 143 YPQLLLRNPPISDAENQLSQFQTDLIIDNMFCT-----NRTVQHHVLFTDNMVLICREGN 197 P + L+ I + + D ID F + + H LF ++ + + Sbjct: 142 APGIDLQ--VIQGSRTSMLTGVYDGEIDMAFGVFNSPLSDELHTHTLFIEHFICAADKNT 199 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + ++ + H+L+ + + + + R+I T + + +VAN+ Sbjct: 200 LPKTGSLEKTQWLSRPHILVAMQTNESNEIENALHREGVSRRIAMTLPHWGVASHMVANT 259 Query: 258 DMLAIIPSRFYNLFSRCWPLEKL--PFP 283 D++ R ++LF PL+ P+P Sbjct: 260 DLILTAARRSFDLFLEDSPLQLFTPPYP 287 >UniRef50_Q7MCL9 Putative transcriptional regulator n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MCL9_VIBVY Length = 313 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 7/178 (3%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNLL I + + AA+ L + SA+S+S+ KLR +F D LF R+ G++ T Sbjct: 8 KIDLNLLKILRVLAEEQNTRLAAERLFVGQSAVSKSLGKLRELFGDELFTRERHGLSQTP 67 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 F + + ++Q LES L + +++ R I IA P V+P++Y ++ P Sbjct: 68 FCIAIMPKVNQLLESFEQLLSNQETFEPATIDREICIAINPLFYRSVIPILYPRLRKEAP 127 Query: 145 QLLLRNPPIS-DAENQLSQFQTDLII--DNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 + R S DAE +L Q D+ + + +++ V ++ D L CR +P Sbjct: 128 NAVFRFINWSWDAETKLLNGQIDVGVHFSPLDTSSQIVASNICPAD-FKLCCRRDSPF 184 >UniRef50_C3JP42 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=C3JP42_RHOER Length = 308 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 21/252 (8%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT- 86 + L L + +A+ +V AA L++T ++S+ + I LF R +G+TPT Sbjct: 10 RLKLRHLLLVDALSRQGSVVGAAAALHITQPVATRSLHDIESILGVSLFDRGPRGITPTI 69 Query: 87 ---AFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 AF H I+Q E+ G +E + + T+ + T + ++LP +K H+ Sbjct: 70 FGEAFTTHARAVIAQLTEA--GRHVVELADANRGTVIVGTHLAGSNVLLPGAIARLKVHH 127 Query: 144 PQL--LLRNPPISDAENQLSQFQTDLIIDNMFC-TNRTVQHHVLFTDNMVLICREGNPLL 200 P L ++R L + DLI+ + T+ T L+ +++ L+ R +PL Sbjct: 128 PLLTVVVREGTPEQLLTDLEAGRIDLIVGRLTSPTDDTATRRNLYAESVELVTRVDHPLA 187 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMF-------PDRQINFTSYNILTIAAL 253 E D + + +LP + LR+ ++E F P+ ++ TS+ LT+ L Sbjct: 188 HRE-DVQLEELRGFPWILPGVETV--LRRELEEFFARNGLPLPENRVEATSF--LTVRQL 242 Query: 254 VANSDMLAIIPS 265 + +DM+A++PS Sbjct: 243 LVETDMIAVLPS 254 >UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KZI9_FRASN Length = 310 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 30/257 (11%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ++DLNLL +A+ + + AA+ L LT SA+S+++ +LR DP+ +R G + PT Sbjct: 9 SLDLNLLVALDALLEERSVNAAARRLRLTESAVSRALGRLRRAMDDPVLVRAGHRMVPTP 68 Query: 88 FAMHLHEYISQGLE---SILGALDIEGSYDKQRTITI----ATTPSVGALVLPVIYRAIK 140 A+ + + +E ++ + RT TI A T ++G +L + R Sbjct: 69 RALAVQAEVHALVERAHAVFTPIREPDLATLARTFTILASDALTTAIGVDLLDRLTR--- 125 Query: 141 THYPQLLLR-NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + +R P S ++ L DL I ++ T+ + VL + + + R G+PL Sbjct: 126 -DAPGVRVRFLPEPSATDDPLRDGTADLEIGDIDSTSPEIHIEVLGEEQALAVVRAGHPL 184 Query: 200 LSLEDDRETIDNAAHVLL---------LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTI 250 E + A HV L E GLR+ V P Sbjct: 185 TRGRLTPERLAAARHVTASRRGRFAGPLDEVLAARGLRRTVAVSVPSHSAALL------- 237 Query: 251 AALVANSDMLAIIPSRF 267 LVA SD++ ++P+R Sbjct: 238 --LVAGSDLVGLVPARL 252 >UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U796_MARAV Length = 303 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ++DL L F AV + AA L +T SA+S ++++LR F DPLF++ G+G+ PT Sbjct: 8 SLDLRSLATFVAVLDEGSVSRAAVRLGVTQSAVSHTLERLRQAFGDPLFVKSGRGIVPTD 67 Query: 88 FAMHLHEYISQGLESI--LGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 +A+ +I Q L+ + L + + T TIA L+LP + R ++ P Sbjct: 68 YALRTGPHIRQLLDDLRTLPSGPPFEPASAEFTFTIAANDYQRDLLLPGLLRILRQQAPG 127 Query: 146 LLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + L+ P I +A+ L + DLII + L D MV+ + N + Sbjct: 128 IRLQVIPSGIPNAD-MLRKEACDLIISPHAPETTDIMQRGLMADRMVVFY-DPNQRNAPT 185 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAII 263 D E + A H+ L+ G + DR+ T N + + +DMLA Sbjct: 186 DLAEYL-KADHIALMFATGERPGFENTLHAKGLDRRNVVTVANFSGLPEFLRGTDMLATA 244 Query: 264 PSRFYNLFSRCWPLEKLPF 282 P R R + LPF Sbjct: 245 PERMSAQLMRDFAWVPLPF 263 >UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas RepID=A4XRF8_PSEMY Length = 320 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 3/126 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR D+NLL +FE + + + + L L A+S ++ +LR +F DPLFIR G+ + P Sbjct: 7 LRRADINLLVVFETMMHEQNVSRVGEKLFLGQPAVSAALGRLRHLFDDPLFIRTGRVMEP 66 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T+ A + ++ L+SI AL ++D + T I + V +LP + R ++ Sbjct: 67 TSRAQEIFSNLTPALDSIAAALGKCQTFDPTTSEATFHIGLSDDVEYALLPTLLRHLRVD 126 Query: 143 YPQLLL 148 P + L Sbjct: 127 APNIRL 132 >UniRef50_Q2T8G4 Transcriptional regulator, LysR family n=14 Tax=Burkholderia RepID=Q2T8G4_BURTA Length = 351 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 5/123 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++++DLNLL F AVYV + + AA L +T ++S + +LR++F D LF+R G GV P Sbjct: 28 VQDLDLNLLKTFRAVYVERHVGRAALRLGVTQPSVSHGLGRLRLMFRDALFVRTGTGVEP 87 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSY----DKQRTITIATTPSVGALVLPVIYRAIKT 141 T A L + + L + LD EG+ QR + + + LP + + + Sbjct: 88 TPRARRLAASVDKALAILQDVLD-EGARFLPDTTQRVFRLHMSDFATSAFLPTLLQVLDA 146 Query: 142 HYP 144 P Sbjct: 147 RAP 149 >UniRef50_A3YI62 Transcriptional regulator, LysR family protein n=2 Tax=Oceanospirillaceae RepID=A3YI62_9GAMM Length = 305 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 22/270 (8%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + LR DLNLL IFEA+ + AA+ + L+ SA+S ++ +LR DPL ++ G Sbjct: 1 MSVLRQFDLNLLIIFEALISECHVSRAAEKVFLSQSAMSHALNRLRTQLDDPLLVKTENG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAI 139 +TPT A+ + + Q L + + S+ RT IA+T +V P + + Sbjct: 61 LTPTPRALAMLPDVRQALNLVERTISPAESFQASLSDRTFRIASTDYFETVVFPEWFSQL 120 Query: 140 KTHYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVL---FTDNMVLICR 194 + P + + IS+ A +L + + DLI+ M + H ++ T+ V + Sbjct: 121 QLSAPNVRVEIDLISEESALLRLEKGEIDLIV-GMDKEQKLPSHLIVQDWLTEKQVCLAS 179 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLP-------EEQNFSGLRQRVQEMFPDRQINFTSYNI 247 N ++ R ++ A+ L LP E + S + + + R ++ N Sbjct: 180 IQN-----QNARGSLSLEAY-LALPHIRFFDLEGKTDSNVDRWLASQTLARNHIASTTNY 233 Query: 248 LTIAALVANSDMLAIIPSRFYNLFSRCWPL 277 + A +VAN++ + +P LF++ P+ Sbjct: 234 MAAARIVANTEAIITLPYHMAKLFTQMMPV 263 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P30979 Uncharacterized HTH-type transcriptional regulat... 404 e-111 UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=E... 329 8e-89 UniRef50_Q32IV1 Putative transcriptional regulator LYSR-type n=1... 302 1e-80 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 285 2e-75 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 280 5e-74 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 280 5e-74 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 279 1e-73 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 276 8e-73 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 275 1e-72 UniRef50_D0YJS8 Transcriptional regulator, LysR family n=2 Tax=K... 273 5e-72 UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 272 1e-71 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 272 1e-71 UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 272 2e-71 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 271 3e-71 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 270 4e-71 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 269 8e-71 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 267 5e-70 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 266 8e-70 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 265 1e-69 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 265 2e-69 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 265 2e-69 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 265 2e-69 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 264 2e-69 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 264 3e-69 UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=S... 264 5e-69 UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=B... 263 7e-69 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 262 1e-68 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 261 2e-68 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 261 2e-68 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 261 3e-68 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 260 4e-68 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 259 7e-68 UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteob... 259 9e-68 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 259 9e-68 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 257 3e-67 UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=M... 257 4e-67 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 257 5e-67 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 257 5e-67 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 256 6e-67 UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vi... 256 7e-67 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 256 7e-67 UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=B... 256 9e-67 UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=B... 256 1e-66 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 255 1e-66 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 255 2e-66 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 255 2e-66 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 254 2e-66 UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=... 254 3e-66 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 254 3e-66 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 254 3e-66 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 254 3e-66 UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=A... 254 3e-66 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 253 6e-66 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 253 6e-66 UniRef50_A4Z170 Putative transcriptional regulatory protein, Lys... 253 7e-66 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 252 9e-66 UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=c... 252 9e-66 UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Bu... 252 9e-66 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 252 1e-65 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 252 1e-65 UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=B... 251 2e-65 UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=V... 251 3e-65 UniRef50_P52679 PCP degradation transcriptional activation prote... 251 3e-65 UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=... 250 3e-65 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 250 4e-65 UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=H... 250 4e-65 UniRef50_C5AL93 Transcriptional regulator, LysR family protein n... 250 4e-65 UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=P... 250 5e-65 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 249 8e-65 UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogo... 249 9e-65 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 249 9e-65 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 249 1e-64 UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=... 249 1e-64 UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=... 248 1e-64 UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=... 247 3e-64 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 247 4e-64 UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gamma... 247 4e-64 UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria Rep... 247 4e-64 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 247 4e-64 UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=S... 247 6e-64 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 246 7e-64 UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=S... 246 8e-64 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 246 8e-64 UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=S... 246 8e-64 UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=S... 245 1e-63 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 245 1e-63 UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=... 245 2e-63 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 245 2e-63 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 245 2e-63 UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobac... 244 2e-63 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 244 3e-63 UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=S... 244 3e-63 UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=G... 244 4e-63 UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=S... 243 4e-63 UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=B... 243 5e-63 UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=M... 243 7e-63 UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomona... 242 9e-63 UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative... 242 1e-62 UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=So... 242 2e-62 UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=c... 241 2e-62 UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=P... 241 2e-62 UniRef50_A7JRS0 Possible LysR family transcriptional regulator n... 241 2e-62 UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding... 241 2e-62 UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=B... 241 3e-62 UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=G... 241 3e-62 UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=O... 241 3e-62 UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=A... 241 3e-62 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 241 3e-62 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 241 3e-62 UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding... 240 4e-62 UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=M... 240 4e-62 UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter ... 240 4e-62 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 240 4e-62 UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=... 240 5e-62 UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales ba... 240 6e-62 UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia r... 240 6e-62 UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=V... 239 9e-62 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 239 9e-62 UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=D... 238 1e-61 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 238 2e-61 UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=P... 238 2e-61 UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=... 238 2e-61 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 238 2e-61 UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vi... 238 2e-61 UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=P... 238 2e-61 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 238 3e-61 UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=G... 238 3e-61 UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=... 238 3e-61 UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=... 237 3e-61 UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n... 237 3e-61 UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=V... 237 3e-61 UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=P... 237 3e-61 UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=M... 237 3e-61 UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=A... 237 5e-61 UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=H... 236 7e-61 UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=A... 236 8e-61 UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=H... 236 9e-61 UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium ... 236 1e-60 UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=G... 235 2e-60 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 235 2e-60 UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=D... 235 2e-60 UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae R... 235 2e-60 UniRef50_A9R140 Substrate-binding transcriptional regulator, Lys... 235 2e-60 UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=V... 235 2e-60 UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=S... 234 2e-60 UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator... 234 3e-60 UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=N... 234 3e-60 UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=... 234 4e-60 UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=... 234 4e-60 UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=A... 234 4e-60 UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=B... 234 4e-60 UniRef50_A6FY23 Transcriptional regulator, LysR family protein n... 233 4e-60 UniRef50_B7RV99 Transcriptional regulator, LysR family protein n... 233 5e-60 UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=R... 233 6e-60 UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteri... 232 9e-60 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 232 1e-59 UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobact... 232 1e-59 UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Ta... 232 1e-59 UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n... 232 2e-59 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 232 2e-59 UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae ... 231 2e-59 UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n... 231 2e-59 UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas ma... 231 3e-59 UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholde... 231 3e-59 UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=P... 231 3e-59 UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=c... 230 4e-59 UniRef50_A3YI62 Transcriptional regulator, LysR family protein n... 230 4e-59 UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=A... 230 5e-59 UniRef50_B3YF82 Transcriptional regulator, LysR family n=2 Tax=S... 230 5e-59 UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=... 230 5e-59 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 230 6e-59 UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=A... 230 6e-59 UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=B... 229 9e-59 UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=V... 229 1e-58 UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorh... 229 1e-58 UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1... 229 1e-58 UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=A... 229 1e-58 UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=G... 229 1e-58 UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=B... 228 1e-58 UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n... 228 1e-58 UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=... 228 2e-58 UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteoba... 228 2e-58 UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=... 228 2e-58 UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans... 228 3e-58 UniRef50_P46924 Probable HTH-type transcriptional regulator leuO... 227 3e-58 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 227 4e-58 UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter ... 227 4e-58 UniRef50_A3VA58 Transcriptional regulatory protein n=2 Tax=cellu... 227 4e-58 UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n... 227 5e-58 UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=R... 227 5e-58 UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=P... 226 8e-58 UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=B... 226 8e-58 UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=P... 226 8e-58 UniRef50_A6GE91 Probable transcription regulator protein n=1 Tax... 226 9e-58 UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=A... 226 9e-58 UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=R... 226 1e-57 UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibri... 226 1e-57 UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=S... 226 1e-57 UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax... 225 1e-57 UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=M... 225 2e-57 UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseo... 225 2e-57 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 225 2e-57 UniRef50_Q7MEL0 Transcriptional regulator n=18 Tax=Gammaproteoba... 225 2e-57 UniRef50_Q4KCL9 Transcriptional regulator, LysR family n=15 Tax=... 225 2e-57 UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria ... 224 2e-57 UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=I... 224 3e-57 UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax... 224 3e-57 UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=V... 224 3e-57 UniRef50_A0AZD8 Transcriptional regulator, LysR family n=17 Tax=... 224 3e-57 UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1... 224 4e-57 UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=P... 223 4e-57 UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=D... 223 5e-57 UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=R... 223 6e-57 UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=C... 223 8e-57 UniRef50_C6C4P6 Transcriptional regulator, LysR family n=4 Tax=P... 222 1e-56 UniRef50_Q15Y73 Transcriptional regulator, LysR family n=1 Tax=P... 222 1e-56 UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=A... 222 1e-56 UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulat... 222 1e-56 UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=P... 222 1e-56 UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n... 222 1e-56 UniRef50_A9AMZ1 Transcriptional regulator, LysR family n=6 Tax=P... 222 2e-56 UniRef50_Q0VH46 Putative LysR type regulator n=3 Tax=Proteobacte... 222 2e-56 UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Ag... 222 2e-56 UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales Re... 222 2e-56 UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=B... 221 2e-56 UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n... 221 3e-56 UniRef50_B2I0F3 Transcriptional regulator n=11 Tax=Acinetobacter... 221 3e-56 UniRef50_A6FDU8 Transcriptional regulator, LysR family protein n... 221 3e-56 UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=P... 221 3e-56 UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n... 220 4e-56 UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=G... 220 4e-56 UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholde... 220 4e-56 UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=... 220 4e-56 UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejue... 220 4e-56 UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=P... 220 4e-56 UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory ... 220 6e-56 UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding... 220 6e-56 UniRef50_A5KW47 Transcriptional regulator, LysR family protein n... 220 6e-56 UniRef50_Q0B1J5 Transcriptional regulator, LysR family n=1 Tax=B... 220 7e-56 UniRef50_P77746 Uncharacterized HTH-type transcriptional regulat... 219 8e-56 UniRef50_C5B758 Transcriptional regulator, LysR family, putative... 219 8e-56 UniRef50_Q1YUH5 Nodulation protein d1 n=1 Tax=gamma proteobacter... 219 8e-56 Sequences not found previously or not previously below threshold: UniRef50_B7CP85 Transcriptional regulator, LysR family protein n... 236 7e-61 UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=C... 226 9e-58 UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding... 223 7e-57 UniRef50_C3K6Q2 Nodulation protein D n=1 Tax=Pseudomonas fluores... 221 2e-56 UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=P... 220 6e-56 UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serra... 219 8e-56 UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Ac... 219 8e-56 UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=P... 219 8e-56 >UniRef50_P30979 Uncharacterized HTH-type transcriptional regulator ybeF n=45 Tax=Enterobacteriaceae RepID=YBEF_ECOLI Length = 317 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 317/317 (100%), Positives = 317/317 (100%) Query: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI 60 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI Sbjct: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI 60 Query: 61 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT 120 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT Sbjct: 61 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT 120 Query: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ 180 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ Sbjct: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ 180 Query: 181 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI 240 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI Sbjct: 181 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI 240 Query: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS Sbjct: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 Query: 301 LRDPILHGVIDVIRNAF 317 LRDPILHGVIDVIRNAF Sbjct: 301 LRDPILHGVIDVIRNAF 317 >UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=Enterobacteriaceae RepID=B4TAI7_SALHS Length = 317 Score = 329 bits (844), Expect = 8e-89, Method: Composition-based stats. Identities = 218/317 (68%), Positives = 265/317 (83%) Query: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI 60 M NNQ E + + + KPQIF TLRNIDLNLLTIFEAVYVHKGIVNAAK+LNLTPSAI Sbjct: 1 MSDNNQAERQPADQHLQDKPQIFRTLRNIDLNLLTIFEAVYVHKGIVNAAKILNLTPSAI 60 Query: 61 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT 120 SQSIQKLR IFPDPLFIRKGQGVTPT +A HLHEYISQGLESILGALD+ GSYDKQRTIT Sbjct: 61 SQSIQKLRTIFPDPLFIRKGQGVTPTTYATHLHEYISQGLESILGALDLTGSYDKQRTIT 120 Query: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ 180 I TTPSVGALV+P+IY+AI+ YPQLLLRN P+ DAE+QLSQFQTDLII+ NR++Q Sbjct: 121 IGTTPSVGALVMPIIYQAIRPRYPQLLLRNIPVDDAESQLSQFQTDLIINTHSYNNRSIQ 180 Query: 181 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI 240 HHVLF+D + ++CR+ +P L+ E +++A H L+ E Q+ S LRQR+QE FPD+QI Sbjct: 181 HHVLFSDTLEIVCRQHHPCLANAITEERLNSADHTFLMLEGQHLSLLRQRLQETFPDQQI 240 Query: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 +F+SYNI TIA+L+A+SD+L ++P+RFY+LFSRCWPLE+LP+ +N EQ++FS+HYNK S Sbjct: 241 SFSSYNIFTIASLIASSDLLGLMPTRFYDLFSRCWPLERLPYAPVNSEQVEFSLHYNKLS 300 Query: 301 LRDPILHGVIDVIRNAF 317 LRDP+L VID+IR AF Sbjct: 301 LRDPVLENVIDIIREAF 317 >UniRef50_Q32IV1 Putative transcriptional regulator LYSR-type n=1 Tax=Shigella dysenteriae Sd197 RepID=Q32IV1_SHIDS Length = 311 Score = 302 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 259/310 (83%), Positives = 262/310 (84%), Gaps = 45/310 (14%) Query: 53 LNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGS 112 LNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDI GS Sbjct: 2 LNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIAGS 61 Query: 113 YDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNM 172 YDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNM Sbjct: 62 YDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNM 121 Query: 173 FCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQ 232 FCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPE QNFSGLRQR+Q Sbjct: 122 FCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEGQNFSGLRQRIQ 181 Query: 233 EMFPDRQINFTSY---------------------------------------------NI 247 EMFPDRQI+FTS+ NI Sbjct: 182 EMFPDRQISFTSFTSYTSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNI 241 Query: 248 LTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILH 307 LTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLR PILH Sbjct: 242 LTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRAPILH 301 Query: 308 GVIDVIRNAF 317 GVIDVIRNAF Sbjct: 302 GVIDVIRNAF 311 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 135/300 (45%), Gaps = 7/300 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 F + ++DLNL+ + A+ + + A K L LT SA S ++ +LR +F DPLF+R +G Sbjct: 60 FHDVASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRTSRG 119 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAI 139 + PTA A L E + + + ++ E + R+ ++AT ++ P + + Sbjct: 120 LAPTARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATADYGSFVLAPKLLDRL 179 Query: 140 KTHYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMF--CTNRTVQHHVLFTDNMVLICREG 196 P + L + E QL++ D+++ + +L+ + + R+G Sbjct: 180 GREAPNVDLWLRALDASFEEQLARGDADVVVAPARRDGLPAGIHSRLLYRERFACLVRKG 239 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +PL+ D + + HV + P + + + ++ R++ + L +VA Sbjct: 240 HPLVKKGIDLASWTSMRHVFIAPRGTPGGVVDETLAQLGKRRRVALAVPHFLLAPHVVAG 299 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 SD++ + +R F+ PL + P + + +++++ RDP D +R A Sbjct: 300 SDLVVTVGARVAEAFAEILPLRVVD-PPVKLPGFEVRMYWHERHHRDPAQQWFRDAVRGA 358 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 115/292 (39%), Gaps = 5/292 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++ D+ LL +F+ +Y + + AA L L A+S ++ KLR F DPLF+R G+ P Sbjct: 1 MQTADVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A L + Q L+++ +D +RT I+ T ++LP ++ ++ Sbjct: 61 TPMARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKT 120 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + + P+S + L + DL + M LF V + +P + Sbjct: 121 SPGVHIDIVPLSAETPRMLETGEADLALGFMPQLEAGFYQQSLFRQRYVCVASTDHPRIH 180 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 E + H ++ L + + R I N L IA +V +DML Sbjct: 181 DELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIAFVVEQTDMLV 240 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 IP R + P P H+++ DP + VI Sbjct: 241 TIPERLAQVLEGRGRFRVFPVP-FELPDYAVKQHWHERYHHDPGNRWLRRVI 291 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 280 bits (716), Expect = 5e-74, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 146/294 (49%), Gaps = 7/294 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +RNIDLNLL IF+A+ I AA+ L++T A+S ++ ++R ++ DPLF++ G+G+ P Sbjct: 1 MRNIDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L +S L + A++ + +D +R + + L+ + R ++T Sbjct: 61 TTHALSLWHQVSGPLIQLKDAVNPQD-FDPSTTRRRFRVGMSDITTDLIWLPMRRMVETE 119 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L P + ++E+ L+ + DLI+ M + ++ LF + V R+ +PL Sbjct: 120 APNIDLHAVPANGNNSESILTNGEVDLIVGVMQEFRTSFRNDFLFESDYVCAMRKDHPLA 179 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + E A H+L+ + + + + R++ T + ++ AL+ SD++ Sbjct: 180 AEPLTLEKYLKADHLLVSLTGEATGFVDITLSQQGLSRRVAMTVNHFASVPALLEGSDLI 239 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +I+P+ ++C L + P L S+ ++ RDP + + + I+ Sbjct: 240 SIVPNMVIAKGAKCGSLH-VTKPPLEIRPTPVSMIWHARHDRDPGVLWLREKIK 292 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 8/301 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + ++DLNLL F+A+ + + +AA L ++ A+S ++ +LR+IF DPLF+R QG+ Sbjct: 1 MNIASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT +A L E +S+ E I AL I +D +T + T L+LP + + I+ Sbjct: 61 QPTPYAEQLIEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKHIQ 120 Query: 141 THYPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + +R P A+ ++ + DL + L+TD I R+G+P Sbjct: 121 VAAPNACVRVRRIPEQGAKEAMANGEIDLAVGLFPYLKAGFYQQRLYTDKFACIVRQGHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNF-SGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + + + HV+++ + + + + R+I TS N L + ++ + Sbjct: 181 TVHDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHLRRKIVMTSQNFLVLPMIIEQT 240 Query: 258 DMLAIIPSRFYNLFSR-CWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 D +A IP R + ++ L P + +D H+++ DP + D++ Sbjct: 241 DAIATIPFRMAQKIASYSTGIKILESP-IPFPNVDIKQHWHERFHYDPANKWMRDLMVTL 299 Query: 317 F 317 F Sbjct: 300 F 300 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 276 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 135/299 (45%), Gaps = 7/299 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +R +DLNLL +F+A+ + + A + L+ A+S ++ KLR +F DPLF+R G+G+ Sbjct: 1 MDIRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIK 140 PT A L E +++ L+ + + + + R + + + LP + + Sbjct: 61 EPTPRAQALGEPVARLLDLVQTEILPMPEFRPAESSRNFVLCMSDIGEMVFLPRLESFLD 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNR-TVQHHVLFTDNMVLICREGN 197 P + ++ +S + E L+ DL I N +++ L+ + V I R+ + Sbjct: 121 KAAPHVSIKTVALSMPELEEGLASGDVDLAIGYFPGLNSESLKRKALYRHSYVCIARDDH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P + + AAHV++ PE + L + + + + F++ + + +VA S Sbjct: 181 PEIGDTLSLDQYRAAAHVMVHPEGREQDVLARTHERLGIRVNVRFSTPRFIGVPFVVAGS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 DM+A +P F+ ++ LP P + +H++ +P + D + Sbjct: 241 DMIAAVPQAVGRRFAEFVNVKLLPLP-FPAPTYELYLHWHPRFHHEPANRWIRDAMSEL 298 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 138/299 (46%), Gaps = 10/299 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L +DLNL +F+A+Y + A +++ +T A+S ++ +LR F DPLF+R QG+ Sbjct: 1 MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 PT A ++ + L + ++ ++ + T I+ T A++LP +++ ++ Sbjct: 61 VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQRLR 120 Query: 141 THYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P +++ + + +L+ + D +D T+ V+H L D V R+G+P Sbjct: 121 RLAPTVIIESFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMRKGHP 180 Query: 199 LLSLED-DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 L + E + + H+ + + + +M R+I S + L + ++ + Sbjct: 181 LATKEKFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKIALRSQHYLMASQVLQQT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 DM+ +P R F+R L P + ++ +++++ + +DP + + + Sbjct: 241 DMVMTVPER----FARRHDLHAFNLPVNDVPPVETHLYWHESTDQDPANRWMREQMIEL 295 >UniRef50_D0YJS8 Transcriptional regulator, LysR family n=2 Tax=Klebsiella RepID=D0YJS8_KLEVA Length = 319 Score = 273 bits (699), Expect = 5e-72, Method: Composition-based stats. Identities = 162/317 (51%), Positives = 217/317 (68%) Query: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI 60 M N R+ Q+F LRNIDLNLLTIFEAVYVHKGIVNAAK+LN+TPSAI Sbjct: 1 MPENTSPSESPERQDERYDRQMFRILRNIDLNLLTIFEAVYVHKGIVNAAKILNITPSAI 60 Query: 61 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT 120 SQSI KLR +FPDPLFIRKGQGV PTA+A HLH+YIS+G+E+ L ALDI GS +QR IT Sbjct: 61 SQSINKLRALFPDPLFIRKGQGVMPTAYATHLHQYISRGMEAFLSALDIAGSPHQQRVIT 120 Query: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ 180 IATTP +GAL++P++ A+K +PQ+LL N I+DA QL Q Q DL+ID + + + Sbjct: 121 IATTPGMGALLIPIVASALKPAFPQILLHNIAITDAARQLDQRQVDLLIDTHLHSGQAIS 180 Query: 181 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI 240 HHVL+ D + + CR +P L D + LLLPE Q + L +R+QE +R+ Sbjct: 181 HHVLYQDRVRMYCRAEHPALHGPQDEAHLAQYEFALLLPEGQRYPTLHRRLQEEMGERRC 240 Query: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 F+++N+LT AA++A SDML + R + + SR WPL+ L F SL +E+I+ ++HYNK S Sbjct: 241 GFSTFNLLTQAAMIAESDMLGLTTERLFAMVSRLWPLQTLDFHSLQDEKINVALHYNKQS 300 Query: 301 LRDPILHGVIDVIRNAF 317 ++P+L +I+ + AF Sbjct: 301 GKEPLLKEIIETVIQAF 317 >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 122/296 (41%), Gaps = 6/296 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 + +IDLNLL +F+A+ AA+ + LT A+S ++ +LR +F DPLF+R +G+ Sbjct: 5 NIASIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSPRGMV 64 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKT 141 T A+ I LE + L +++ + R + + ++LP + ++ Sbjct: 65 ATPAALDAAPAIRSILEQVEVVLSGGPAFEPEESTRQFVLGLSDYAAFVLLPRLTARLER 124 Query: 142 HYPQLLLRNPPISDA--ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + L S L + +LI N ++ +L+ ++ V R +P Sbjct: 125 EAPNISLVIRNTSHGVGLPMLEEGSVELIAGNFPGPPSHMREELLYEEDFVCAGRGDHPA 184 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 L+ D + + H+ + + + E R++ T + L LV +SD+ Sbjct: 185 LAYPLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVTVGHFLMAPFLVDSSDL 244 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A P R + PL P ++ ++ DP + V+R Sbjct: 245 VATEPRRLFEPMPSRLPLRFFA-PPIDLPPFRVVQAWHARHEADPGHQWLRRVLRE 299 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 5/294 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR DLNLL + + + + A+ L L+ A+S ++ +LR DP+ +R G + Sbjct: 1 MDLRGFDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 PT A L E + + +I L +D RT IAT +++P + ++ Sbjct: 61 VPTPRAEQLVEPVQAIVSAIEQTLADPQPFDYSSISRTFRIATNDYGAFVLVPFLMNRMQ 120 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P L I+ D E L + + DL+I + + LF++ + R+ +P Sbjct: 121 KIAPHLTFEIWDIALDVETALREGEIDLVIADAWTLRNCKCRKTLFSETFTCLVRQNHPR 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + + + H L+ + + + + RQ+ T +IL I A++A +DM Sbjct: 181 VDTQLTMDDYLQEKHALVSARGRVTGNVDIALSQQNKQRQVQITLPHILAIPAMMAATDM 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + + +R N F+ + L+ P P + + D ++ + D + + + + Sbjct: 241 IVTVATRIANRFAVDYHLQTFP-PPITLDGFDIAMAWPHRMDNDTAIRWLRNEL 293 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 130/292 (44%), Gaps = 6/292 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + DLNLL F+A++ + + AA+ LN+T A+S ++ +LR F D LFIR GV PT Sbjct: 3 KKFDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPT 62 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHY 143 + + + L + L S+D +RT I +VLP + ++ Sbjct: 63 ERCSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKA 122 Query: 144 PQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P++ LR P+ + + L D + + + + + + VLI R +P + Sbjct: 123 PRVDLRISPVKLGETYDALDSGDLDFLFFSGTEPPKRINFSPMLEEKFVLIMRANHPKMC 182 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 E + + H++ + + + + E R++ TS + +IA V ++DM+A Sbjct: 183 QEMTLDAYADLTHIVFSTRGDSHTRIDDLLAENGLRRRVALTSSHHTSIAETVRDTDMVA 242 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + PSR + + L + P + +++++ DP + +++ Sbjct: 243 LSPSRLAHRYVHRGGLIAVQ-PPVEFPHFHLRLYWSRRLNSDPGAMWLRNIL 293 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 129/299 (43%), Gaps = 6/299 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLL +F + V + + A+ L LT A+S ++++LR DPLF+R QG+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT +A HL E ++ + ++ AL S+D +RT T+A T +P + + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 141 THYPQLLLRNPPISDA--ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P ++ S L DL + + L ++ V +CR+ +P Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQRRLLQNHYVCLCRKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E + HV ++ + + + R I + + ++ +D Sbjct: 181 VTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGHILQRTD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +LA +P R + + L LP P + +I ++ ++ +D + ++ + F Sbjct: 241 LLATVPIRLADCCVEPFGLSALPHPVV-LPEIAINMFWHAKYHKDLANIWLRQLMFDLF 298 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 6/293 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LR+IDLNLL +F+A+ + AA+ L ++ AIS ++Q+LR F D LF+R G+T Sbjct: 4 NLRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHHGMT 63 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PT A LH+ + L ++ L+ E +D QR I + +VL + ++ Sbjct: 64 PTPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLATLRQ 123 Query: 142 HYPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P ++L D ++L + + DL +D + +Q +VL + +V+I R +P + Sbjct: 124 QAPHVVLEIIAADDDMPDELHKGRADLSVDAFVADDDRLQRNVLLEEKLVVIARRSHPHI 183 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 D++ +A HV +LP L Q + R+ ++ A+ SD++ Sbjct: 184 KGHCDKQQFLDAEHV-VLPNRNRQLPLDQILNAPGWQRRTGARVTQFASMLAVCGGSDLI 242 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 A +P R ++ L+ LPFP + + + ++ RDP + + Sbjct: 243 ATVPDRLAQQYAETMQLQVLPFP-VALPPVPIYMIWSPTQQRDPAHRWLRQQL 294 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 134/296 (45%), Gaps = 6/296 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + IDLNL +F+A+Y GI A++VL+LT A+S ++ +LR D LFIR +G+TP Sbjct: 3 ISRIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGMTP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIKTH 142 T +A L + Q L + L + + + + L+LP + + + Sbjct: 63 TPYAHQLIGTVRQALNQLQRGLHQGQEFAPAQLETSFRLCVRDLFDVLLLPALIKNCRAI 122 Query: 143 YPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P+++ P + L+ + DL D + + ++ H LF D + + R +P L Sbjct: 123 APKVVFNCLRSPREQILHDLASGRIDLAADVLISHDDSICHEKLFEDRLTCLLRRDHPAL 182 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + E + HV + E ++ R++ + N A ANSD++ Sbjct: 183 ASEWSLAEMLRWPHVQVSSREHGPGYEDIQLSRHGLQRKLGLRTPNFYGAALTAANSDLI 242 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 P + ++ PL+ +PFP L ++ +++++ + R+P + + + A Sbjct: 243 LCAPEQVARKLTQTIPLQVMPFP-LTLNPLETYLYWHRSTDREPAHIWLREQTQRA 297 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 267 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 148/297 (49%), Gaps = 6/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LRN+DLNLL +F+AVY I +AA+ L L+ A+S ++ +LR F DPLF+R G+GV Sbjct: 5 NLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRAGRGVK 64 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PT + + E + + L I D + S D +RT I + A+++P + R I Sbjct: 65 PTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRIVIVDPLEAMLMPTMLREISA 124 Query: 142 HYPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 H PQ+ + + P ++ + + DL + + + + V++ R G+P Sbjct: 125 HAPQVTIESRPPWNTNVADAIIAGTLDLACYTFPVSAPGLVFKTICPCDHVIVARRGHPK 184 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + D ET + A V L+PE + + + + + +R+I + + ++ +V ++D+ Sbjct: 185 IGATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWSMPGVVGSTDL 244 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + ++P RF L + + L+ P + D+ + +++ + DP + D + A Sbjct: 245 VTVMPRRFAELMAPKFGLQIFESP-IPISPQDYHMIWHEKNTDDPGHKWLRDTMVKA 300 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 7/298 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L DLNLL +F+ +Y + AAK L+LT AIS S+ +LR F DPLF R+G + Sbjct: 1 MALNRPDLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A E + GL I A++ ++D ++T + + + LP + + Sbjct: 61 VPTPLARRFLESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKLA 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 YP + +++ ++ D E QL+ + D ID + + H +L D +V++ R+G+P Sbjct: 121 P-YPDMEVQSQRVARRDMETQLAAGKLDFAIDVLLPVSNQTSHELLRQDRLVVLARKGHP 179 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 +++ D + A H+L+ + + R I + +V +SD Sbjct: 180 VIAQGLDMASYLEARHILVSSRAEGPGIEDFELSRHGAQRTIRLRCQHYYAACRVVESSD 239 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +L +P + + ++ +E L P + ID ++++K ++P L D++RN Sbjct: 240 LLLTMPETYARIIAQNTDIEVLA-PPVEMPSIDVHLYWHKAYEQEPALVWFRDLLRNL 296 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 6/296 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L IDLNL +F+A+Y I AA+ LNLT A+S ++ +LR +F DPLF R+GQG+ Sbjct: 4 MQLSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRGQGM 63 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 PT A L + L+S L +D R TI ++ + +LP + + Sbjct: 64 APTPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTIGMRDALESTLLPPLMARVT 123 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + PQ+ + + E++L D ID + + + H D M+++ R +P Sbjct: 124 SVAPQVEIAAIRFDRREMESELLAGTIDAAIDILLPVSPAIHHAQFMADPMIVLARRDHP 183 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L+ E E A HV + + Q + M R++ + +V+ +D Sbjct: 184 LVKKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHYAAACRVVSCTD 243 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +LA +P R+ + + + L P ++ ++++ D + + + Sbjct: 244 LLATLPLRYARIANEPYANRILSLP-FKVPSLELHLYWHAGGENDGANRWLREQLM 298 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 119/295 (40%), Gaps = 6/295 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLL FEA+ + + A+ L + + S ++++LR + DPLF+R G+ Sbjct: 7 ADLRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFVRTPAGM 66 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A+ L E I L SI L S+D +R I V A++ + ++ Sbjct: 67 IPTPHALALAEPIRAILTSIERTLFARASFDPRAERRVFRIGAMDYVQAVIADPLLAVLQ 126 Query: 141 THYPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P L+L A L++ + DL I +L+ + + Sbjct: 127 AQAPGCKLILTTTDCDTAGRSLARGEIDLAIGAFPQIKAGSHQELLYRERYECVFDAKAC 186 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L R HV++ L ++ R++ ++ N L I L+ N Sbjct: 187 RLGKRVTRAQWLALPHVIMSVHGDYSGPLDDVLKSSGEQREVAVSTPNFLAIPFLLRNKR 246 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 ++A +PSR F L P P D ++ ++ + +P + D I Sbjct: 247 LIAALPSRMARAFCGRLGLSTCPLP-FTAPTFDVTMIWHARTGDEPGAAWLRDQI 300 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 4/291 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L DLNLL F+A+ +G+ A + L +T +A+S ++++LR F DPLFI+ G + P Sbjct: 9 LNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGARMEP 68 Query: 86 TAFAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 T AM L I L+ + ALD + + LV P + ++ + Sbjct: 69 TPRAMELSGMIEAALKQVHVALDNDSFDPANSHYVFRVGMVDYTVPLVFPALLDHLEKYA 128 Query: 144 PQLLLRNPPISDAE-NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 P +L D E L + DL++ + R ++ V+ V I R G+PL+ Sbjct: 129 PNCILEVVNTGDFEGEMLESGEVDLVLSRLDQAPRGLKSRVVGEIPFVCIYRPGHPLIKE 188 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 E A HV P + ++ + +R + + + LVA +D++A Sbjct: 189 PMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDSFGMVPTLVAETDLIAA 248 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + ++ + L+ P P + F + ++ S + + Sbjct: 249 VTHTSAHVIAPAMGLKVQPLP-FEAPPLQFVMVWHDRSEESAPHQWFREQV 298 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 6/296 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LR++DLNLL +F+A+ + AA L ++ AIS ++Q+LR DPLF+R QG+ Sbjct: 4 NLRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQGMV 63 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKT 141 PT A LH +SQ L ++ LD + QR + + +VLP + +++ Sbjct: 64 PTPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTRLRS 123 Query: 142 HYPQLLLRN-PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P +++ D +L + DL +D N ++ VL + + ++ R+ +P L Sbjct: 124 EAPNVVVEVALAGDDMPQRLYTAEADLAVDAFATENDRLRRQVLLAERLAVVARKDHPDL 183 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + ++ +A HV +LP+ L Q + E R+ ++ A + SDM+ Sbjct: 184 WDDCSKQQFLDAEHV-VLPDRNRRLPLDQILNEPGWQRRTGARVTQFASMLATCSRSDMI 242 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 A +P R ++R + L+ LPFP + + + + DP + + Sbjct: 243 ATVPERLAQQYARAFGLKTLPFP-VEVPPLPVYLLWAPVMDNDPAHIWFRQRLMES 297 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 6/293 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 DLNLL +F A+ + + AA+ L +T A+S ++ +LR DPLFIR+ G+ PT Sbjct: 2 KYDLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTE 61 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 A L I L S+ + + ++D R TIA V +++PVI ++ P Sbjct: 62 MAEALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRECAP 121 Query: 145 QLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + LR P + AE T++++ + + L D + + R+ +P ++ Sbjct: 122 GIRLRLTPFGNDLAETGAMSGATEMVLGRIVEPPDNMVVQHLMDDGLACVVRKDHPEIAE 181 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 E HV +LP + GL Q +Q+ R ++ + + L + +VA +D A Sbjct: 182 SISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPEMVAVTDYCAT 241 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +P + +R L+ LP P ++ + + ++ DP + +I Sbjct: 242 LPRLICHRLARDPRLKVLPAP-VDLGRFPVELAWHVRYRNDPAHRWLRSLISE 293 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 66/288 (22%), Positives = 124/288 (43%), Gaps = 6/288 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLL +F + V + + A+ L LT A+S ++++LR DPLF+R QG+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT +A HL E ++ + ++ AL S+D +RT T+A T +P + + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 141 THYPQLLLRNPPISDA--ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P ++ S L DL + + L ++ V +CR+ +P Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQRRLLQNHYVCLCRKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E + HV ++ + + + R I + + ++ +D Sbjct: 181 VTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGHILQRTD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPIL 306 +LA +P R + + L LP P + +I ++ ++ + P Sbjct: 241 LLATVPIRLADCCVEPFGLSALPHPVV-LPEIAINMFWHAKVPQGPSQ 287 >UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLW1_SORC5 Length = 315 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 131/300 (43%), Gaps = 5/300 (1%) Query: 20 PQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRK 79 P L +IDLNLL + +A+ + AA + L+ SA+S ++ +LRV+ DP+ +R Sbjct: 12 PMHPVHLASIDLNLLVVLDALLAEGSVTRAAARVGLSQSAMSHALGRLRVLIDDPVLVRT 71 Query: 80 GQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIY 136 +G+ PT A L I + L I + ++ +R+ T+AT V ++LP + Sbjct: 72 PRGMIPTPRAQELIGPIREALAKIEATVARSPRFEPATARRSFTVATVDYVELILLPRLV 131 Query: 137 RAIKTHYPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 + + + P + L P S+ + + + DL I + L + + + R Sbjct: 132 QKLVSEAPFIDLVARPYDSEMWSAMETGKVDLAIGLLPALPAGFYRQRLIEERYMCVVRR 191 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +P + + +T + H L+ P + + + + E R++ + L A +VA Sbjct: 192 SHPAVRGKLTLKTYTSLPHALISPRGEGGGRVDEVLAERGLSRRVALQIPHFLVAAHIVA 251 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +D++ +P+R +F+ L + P + +++ +DP + V Sbjct: 252 QTDLVLTVPARIARVFAEMEELHVMK-PPVELGGFSVDQVWHERHAKDPAHTWLRGVFAE 310 >UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q5P743_AZOSE Length = 301 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 118/295 (40%), Gaps = 5/295 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +++ L++F+ +Y + + AA+ L L A+S ++ KLR F DPLF+R G+ P Sbjct: 1 METLEIRQLSVFDEIYKTRSVSRAAENLGLGQPAVSIALGKLREHFGDPLFVRTSAGMEP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T L E I + ++ A +D +RT IA T ++LP ++ ++T Sbjct: 61 TPLGEELAEPIRVAVAAVSAASGHRAEFDPTRARRTFRIAMTDISQLVLLPRLWERLRTV 120 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + + +S + L + D+ + M LF + V + +P + Sbjct: 121 APGIHIDIANLSANTAGMLESGEVDVALGFMPQLEAGFYQQALFRQHYVCMASATHPRIR 180 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + H ++ + + + R++ + + IA +V + +L Sbjct: 181 RGLTLAQFEAEEHAVVSTSGTGHLIIDREIARQDIKRRVVLRIPSFVGIAYVVERTALLV 240 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 IP R L + L P P + H++ DP + +I+ Sbjct: 241 TIPQRLGELLADEERLRVYPVP-FPLPEYAVKQHWHGRYNNDPGNRWLRALIQEL 294 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 71/300 (23%), Positives = 136/300 (45%), Gaps = 6/300 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 +L+++DLNLL F+A++ + + AA+ LN++ +S ++ +LR+ F D LF+R Sbjct: 1 MSLMSLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAP 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 +G+ PT + + + + L I ALD ++D +R I VLP + Sbjct: 61 RGIEPTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLA 120 Query: 138 AIKTHYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 + H P L LR+ I + + L + D ++ F + + + V R Sbjct: 121 YMAEHAPMIDLRLRSVDIEEGMDLLDAGELDFMMHMEFPAAKRFGVRPVLHERHVFATRA 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 G+PL+ D T + +HV + S + + + + R++ T+ ++ T+A LV Sbjct: 181 GHPLVREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYRRRVAITTQHMTTVAHLVK 240 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +D++A +PSR P P E+ ++++N+ D + + D I Sbjct: 241 TTDLVASVPSRMAARMVEEGGFAVYPIP-FQIEKAPVAVYWNRRFELDGAMRWMRDAIIE 299 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 7/300 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L+N+DLNLL +F+A++ + + A ++L ++ A+S ++ +LR +F DP+F+R + Sbjct: 1 MNLKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A L + + L I + +D +RT+T+ LP + + Sbjct: 61 RPTDRASELMPSVERVLSMIRDDVLQPVGFDPAANRRTLTLCMPDIGEQYFLPPLINHLA 120 Query: 141 THYPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRT-VQHHVLFTDNMVLICREGN 197 P ++ + E L + DL I R LF R+G+ Sbjct: 121 QVAPGMAVVSHELAPAQLEEALESGRVDLAIGYFPDLRRAVFYQQRLFYSGFCCAVRQGH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P + A HV ++ Q ++E R + + + L++ ++A + Sbjct: 181 PQIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIVRNVKLQTSHFLSLTQIIAQT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 D+LA + L + P P Q ++++ + D + IR F Sbjct: 241 DLLATVTYEAAQLLQAAGKVHIYPVP-FPIPQFPVMQYWHERAHHDRGNQWLRGEIRGLF 299 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 118/293 (40%), Gaps = 5/293 (1%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +D+ LL++F+ +Y + + A + L L +++S ++ +LR F D LF+R +G+ PT Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L + Q LE + A + +D R +A T LP + + P+ Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAPK 120 Query: 146 LLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + + I+ D L DL I M + LF D + R +P + Sbjct: 121 VRVEVLRITADTARLLEAGDADLAIGYMPELDAGFYQQKLFRDGFACVVRRTHPRIDDNL 180 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 HV++ + Q ++ R + + + + L+A++D++A +P Sbjct: 181 TMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLLAHTDLIATVP 240 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 R + ++ + P + H+++ +DP + + F Sbjct: 241 HRIAQTLVKIAQVKAIASPY-RLPEFAIKQHWHERYQQDPANRWLRSTLAELF 292 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 6/295 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLLTIF+A+ + +AA + ++ AIS ++ +LRV D LF+ G+GV Sbjct: 1 MNLRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGV 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A+ L E + + LE + AL G +D R TI++ G +V+P + R ++ Sbjct: 61 KPTQRALQLQEPVRRILEDVRAALTSTGEFDPESSDRVFTISSIDYGGIVVIPRLLRYLQ 120 Query: 141 THYPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 +++ P +A + + DL I + + + +L + + R+ +P Sbjct: 121 KQQSPIIVNINPSQTGEAHRDVDRSSGDLTITSDPLLSPDHECKLLRRELPYCLARKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 ++ E HVLL L + ++ +R+ + + +V N+D Sbjct: 181 DITGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFFNMPYIVGNTD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 M+ +P + F+R + L+ L P N F + +++ D + D I Sbjct: 241 MICTMPRQMAEDFARQFGLQVLAAPFDNWTASYF-MVWHRSFNGDSGHCWLRDSI 294 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 17/308 (5%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 R +DLNLL +F+ V + + AA+ L +T A+S ++++LR + D L R+G GV Sbjct: 5 NFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRGHGVE 64 Query: 85 PTAFAMHLHEYISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRAIKTH 142 PT A+ L + L + L Q T +A + GA ++P + ++ Sbjct: 65 PTPRALALWPAVRHALAQLQETLSPGRFDPASAQTTFVLAMADATGATLIPPLIEIVERE 124 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTV------------QHHVLFTDN 188 P + LR P++ D L + D+ + + + L+ Sbjct: 125 APGVSLRVVPLTTRDPRRLLDEESADMAVGYFPAVLADLTARAQSDNVVAHESTRLYDSQ 184 Query: 189 MVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNIL 248 V + R +PL ++ + A H+L+ + F + + + +R+I T Sbjct: 185 YVCVMRADHPLAAVPMTLDLYCAARHLLVSFSGKPFGFIDGALAALGRERRIVLTVNQFF 244 Query: 249 TIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHG 308 T +VA +D+L ++P F + S L P P + + +++ DP Sbjct: 245 TAGRVVATTDLLTVLPRHFVGVASVRDELVWRPLP-MTLPPVHVDALWHRRRNHDPAHRW 303 Query: 309 VIDVIRNA 316 + + I A Sbjct: 304 LREAIARA 311 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 125/293 (42%), Gaps = 6/293 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL +F A+ + + A + L LT A+S ++++LR +F DPLF+R G+ PT A Sbjct: 10 DLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTPTGMVPTDAA 69 Query: 90 MHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 + LH ++Q I A+ +D QR ++ + LP + + + Sbjct: 70 LRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFLPPLLSMLDRSARGI 129 Query: 147 LLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 L N + + + + DL + + + LF D V + R G+PL + Sbjct: 130 RLEIANVSVDSVSSAMRSGEIDLALGYVPGLDTGCVSKTLFVDEHVCVVRAGHPLRKQKP 189 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 +E + N +V + Q ++E+ R I + + +V ++D+ I P Sbjct: 190 TKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLPHFVVAPEIVQHTDLAMIFP 249 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 F+R LP P I+ +H + DP + ++D I + F Sbjct: 250 RSIAQRFNRNKAFRILPLP-FALPPIEIQVHSHSQFSADPGIAWLLDAIYDMF 301 >UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteobacteria RepID=A8V9B9_9BURK Length = 308 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 5/296 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + ID+ LL +F Y + AA+ L L+ IS ++ KLR + DPLF+R +G+ Sbjct: 1 MIEIDVKLLNVFAETYRTSSVTQAAENLGLSQPTISFNLSKLRDHYKDPLFVRTSRGMEA 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T FA L+E + L S ++ S+D QR IA T ++LP + ++ Sbjct: 61 TPFAQELYEQVVDLLASFSNIARLQTSFDPSEAQRIFRIAMTDISQIVLLPTLLNKLRIV 120 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P+ LR I+ + L + +L + M + LF V++ + L Sbjct: 121 APRAQLRISHITTETPRMLESGEVELAVGFMPQLDAGFYQQKLFPQRFVVLAASRHVALG 180 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 E +A HV + P S + + ++E R + N L IA +VA +D+LA Sbjct: 181 DSMSLEYYLSAGHVTVTPSGTGHSIIDRTLREQQLHRHVVLDVPNYLAIADIVAQTDLLA 240 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +P + +L S + P P Q D H++ + +D + ++ F Sbjct: 241 TVPQKLADLMSSSVDARRYPVP-FEIPQYDVKQHWHARTHQDAGHRWLRALLAELF 295 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 7/299 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR +DLNLL FEA+Y I +AAK LN++ IS ++ +LR DPLFIR G+GV Sbjct: 1 MDLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGV 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A + + L+ I + +D +R I + +++P + RA+ Sbjct: 61 APTPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAV- 119 Query: 141 THYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 Y + L P+ D L+ DL + + ++ + +V++ R+G+P Sbjct: 120 QDYRSVTLEMLPVMDFPIAEGLNDGSLDLALTTFDPQHGDIECEQVGAAKIVIVARKGHP 179 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E + HV L+P+ + S + + ++ DR I + + ++ANSD Sbjct: 180 RIKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFWSFPHILANSD 239 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 ++A++P F + +PL+ P P EQ + + K DP + + I A+ Sbjct: 240 LIAMMPGDFAAHAALFYPLDIFPVPFEFPEQ-HIYMIWKKRHGLDPGHTWLREKIVEAY 297 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 73/306 (23%), Positives = 140/306 (45%), Gaps = 9/306 (2%) Query: 17 EGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLF 76 +L +DLNLL +F+A+ + + A + L L+ AIS S+ +LR +F DPLF Sbjct: 6 NRMDIWMNSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLF 65 Query: 77 IRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLP 133 IR G+ PT A+ L +++ L+++ AL +D RT ++ + + LP Sbjct: 66 IRTRAGMQPTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLP 125 Query: 134 VIYRAIKTHYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVL 191 I A+ P++ LR P+ + E+ L + D I N+ +H LF + V Sbjct: 126 PICEALHQQAPRVRLRIEPLPVEEIEDALRASRLDFAIGNLPTLTARTRHQALFEETYVC 185 Query: 192 ICRE--GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 + R+ G P E + +A+HV + E + L + R I + + Sbjct: 186 MTRKRRGLPRAK-ELSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELPHFVA 244 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 + +++A +D+ A +P R +F+R + P + ++H+++ +D + Sbjct: 245 LPSVLAVTDLFATLPRRLAQIFNRGGNFQIYELP-VTLPIAAVTMHWHEHFDQDEGNVWL 303 Query: 310 IDVIRN 315 +++ + Sbjct: 304 RNLMAD 309 >UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FW21_SORC5 Length = 333 Score = 257 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 7/295 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +R+I+LNLL EA+ V + AA+ +++ SA+S S+ +LR +F DPL + G+G+T Sbjct: 21 DIRSINLNLLPALEALLVEGSVSGAARRAHVSQSAMSHSLARLRELFGDPLLVPLGRGLT 80 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKT 141 PT A+ L + E + AL +D + RT +AT LP + + Sbjct: 81 PTPRALQLRAALPAAFEHLRRALASPEPFDPRTSARTFRVATIDYFELTTLPDVLDHLGE 140 Query: 142 HYPQLLLRNPPIS-DAENQLSQFQTDLII--DNMFCTNRTVQHHVLFTDNMVLICREGNP 198 H P + L S D L DL + + ++ L+ D ++ R+G+P Sbjct: 141 HAPFVRLEIERFSPDVTPALVLGDIDLALFGASQPVPAAGLRRAPLYQDPFAVMARKGHP 200 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + D +T HVL+ E + + + + R++ + ++ V +SD Sbjct: 201 AIKRRLDLDTYVALGHVLVSVEGHRGGAVDRALARLGKTRRVALRLPHFMSAPLAVRSSD 260 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +L IPS + L P +++ DP D+ Sbjct: 261 LLCTIPSSVAQRARELFGLRVFA-PPFELPAAQVVAVWSQRHDDDPAQRWFRDLF 314 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 80/303 (26%), Positives = 134/303 (44%), Gaps = 10/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L N+DLNLL +FEA+Y + + A + LN ++S ++ +LR +F DPLF+R G G+ Sbjct: 1 MNLSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK----QRTITIATTPSVGALVLPVIYRAI 139 PTA A L I LE I AL +D QR +A +LP I + Sbjct: 61 LPTARAHQLMLQIQPVLEQIHQALTPPTRFDPATASQRRFRLAAGDYADITLLPTIISRL 120 Query: 140 KTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + P + +R + QL + + D+ + + LF ++ I + Sbjct: 121 RQAAPGIDIRVSRLDRRTVVQQLERGEIDVALGGHLEVPEGMLVQPLFNESFTCIASRHH 180 Query: 198 PLLSLE-DDRETIDNAAHVLLLPEEQN--FSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 P ++ E + + H L P + + QR+ EM +R++ T +I+ + A+V Sbjct: 181 PQIAAESWNLQQYIGLPHALYAPSDDGSARGIIDQRLTEMGLERRVAATFSHIIALPAVV 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPS-LNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 A SD++A + + F+ ++ LP PS L + RDP L + D + Sbjct: 241 AGSDLIATLATSVARQFADPSRIQFLPLPSELAMPAFPIECVAGRQVKRDPALAWLCDTL 300 Query: 314 RNA 316 Sbjct: 301 SQL 303 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 135/296 (45%), Gaps = 7/296 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 +++DLNLL IF+A+ + AA+ L ++ SA+S+ + +LR F DPLF+R +GV PT Sbjct: 4 KHLDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGVVPT 63 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 A+ + + + Q + ++ +D I T V ++LP + R ++ Sbjct: 64 HRALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQETA 123 Query: 144 PQLLLRNPPISDA--ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + L + E L + DL+I ++ N + LF D+ V +CR G+P L+ Sbjct: 124 PHVSLTLHDMESMMPEEMLLAGKVDLVISSVASVNFPIYRQELFRDHYVCLCRAGHPALA 183 Query: 202 LEDDRETIDNAAHVLL-LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E ++ H+ + L+ +Q + R + ++L I A + +D++ Sbjct: 184 DPVPIEQFVSSRHLAMPRQNGARERVLQDTLQRLGVTRDVAVQVPHMLAIPATLTATDLV 243 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 A + R F+ PL+ L P L S ++ + R P + D + + Sbjct: 244 ATMACRVAREFAARHPLQVLAHP-LPLPDFPVSQLWHDRTRRSPSHQWLRDTVYDL 298 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 70/324 (21%), Positives = 136/324 (41%), Gaps = 17/324 (5%) Query: 6 QIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQ 65 I+ ++ +P T R +DLNLL +F+ V + + AA+ L+LT A+S +++ Sbjct: 10 SIQTMPPGPLTKERPLNPTNFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALR 69 Query: 66 KLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIAT 123 +LR D L R GQG+ PT A + + + L+ + +L D T +A Sbjct: 70 RLRETLGDELVQRSGQGMAPTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAM 129 Query: 124 TPSVGALVLPVIYRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCT------ 175 + A ++P + ++ P + +R P++ D L + DL + Sbjct: 130 ADATAAELIPGLIETLEQEAPGVSMRVIPLTTRDPRRLLDEQACDLAVGYFPSVLADLTA 189 Query: 176 ------NRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQ 229 QH L+ V + R+G+PL S + A H+L+ + + + + Sbjct: 190 HAQSGEPMPFQHRRLYDGEYVCVMRKGHPLASGPLTLDRFCAARHMLVSFSGRPYGFIDE 249 Query: 230 RVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQ 289 + + +RQ+ T T +VANS++L ++P F + L P P + Sbjct: 250 SLASLGRERQVVLTVNQFFTAGRVVANSNLLTVLPRHFVRVTGIAEQLVLRPLP-FDVSA 308 Query: 290 IDFSIHYNKFSLRDPILHGVIDVI 313 + +++ S + + + + Sbjct: 309 VHVDAVWHRRSQQRGAHVWLREAV 332 >UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXV6_9VIBR Length = 303 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 123/298 (41%), Gaps = 6/298 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + + +I+L+ L + + ++ K + A + LT SA+S +++KLR F D L IR+G Sbjct: 1 MSNISDIELSQLRLLQIIFETKNLTQAGERAGLTQSAVSHTLKKLRHSFNDSLVIRQGNK 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + T A L + + L + + +D RT IAT+ V ++ P + R Sbjct: 61 MVLTPRAESLQTSLGRWLNDFERNILFQEVFDPLTSDRTFYIATSDLVEHILAPHLSRHF 120 Query: 140 KTHYPQLL--LRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 P + R +Q+ + D I + T+ + L+ D+ V + R G+ Sbjct: 121 GRIAPNIRIVFRKIEKRALASQIESGEVDFAISVIDSTHPNLMVRTLYRDDFVSVVRAGH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 PLL+ + + HVL N + ++ + R + + N + +V +S Sbjct: 181 PLLNSKIKAKDFCQYPHVLASTGNDNRGMVDDALEGLGLSRVMQYKVANFSSAPYIVESS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 D + P F +L + + + P + E ++++ + D + I Sbjct: 241 DAILTAPRTFVDLIAGKFNVSSF-TPPVELESYAMKMYWHIKNKDDQANRWFREQIAE 297 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 133/297 (44%), Gaps = 4/297 (1%) Query: 22 IFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 + + +DLNLL IF+A+ + I AA+ L +T ++S ++ ++R + DPLFI++G+ Sbjct: 1 MSAGMSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGR 60 Query: 82 GVTPTAFAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAI 139 G+ P+ FA+ L + ++ LE I A+ + +RT IA T L P + R + Sbjct: 61 GIKPSPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIAITDGTSGLFWPALRRHL 120 Query: 140 KTHYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + H P++ L P D E L + DL++D + + LF + V + + + Sbjct: 121 ERHAPKINLHAVPYKLDGEALLVNAEVDLVLDYYENRHPQILSQHLFDNQFVCVMAKAHA 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L + A H+L+ + +++ ++ R+I T + + L+ S Sbjct: 181 LSEKTLTLDDFAAAEHLLVSLSGDASGTVDRKLAQLGHSRRIAMTVNSFASAKTLIEESR 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +++ +P + L P + S+ ++ + L + + I + Sbjct: 241 LISTLPYSIIASWQSLDKLTVKTLP-FTVPSVPISMAWHSRNDASISLRWLREAIVD 296 >UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=B2JSH4_BURP8 Length = 309 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 133/298 (44%), Gaps = 7/298 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + N DLNLL IF+A++ H + AA+ L L+ A S ++++LR D LF++ G G+ P Sbjct: 8 MDNFDLNLLRIFDALWRHGHLGKAAEELTLSQPAASYALKRLREELGDVLFVKTGSGMQP 67 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L + L I + ++ QRT TIA + + LP + + + + Sbjct: 68 TPRAILLAPVVQSVLADIRERVLKAPNFVPDKAQRTFTIALSDVGEMVSLPRLLQRVTSL 127 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNR-TVQHHVLFTDNMVLICREGNPL 199 P + + + + L + + DL I + V L + V + R+ +P Sbjct: 128 APSVNVTTVSFAPKQLLSSLQRSEVDLAIGYFPDLDGVDVFQQHLVRHSFVCLVRQNHPA 187 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + ++ H ++ E + + Q ++E R+ + + L+I +A +D+ Sbjct: 188 VQGRLTKKLFCELPHAVVQVEGRRQEIVEQFLKENGIRRREVLHTPHFLSIPMTIAMTDL 247 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 + + S +F+R LE L P + D + ++++ DP + ++R F Sbjct: 248 VVTVSSDVGEIFARIAELEILD-PPYKMPRFDVNQYWHRSQHDDPGNRWMRGLVRELF 304 >UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39AY8_BURS3 Length = 331 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 10/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LRNIDLNLL +F+ +Y + AA L+LT ++S ++++LR +F D LF++ G+ Sbjct: 21 PDLRNIDLNLLLVFDVLYRTRSTTRAADALHLTQPSVSNALKRLRTLFDDALFVKTADGM 80 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A + + +GL S+ AL ++D RT + T+ A+ +P + ++ Sbjct: 81 QPTPRADAIAARVDEGLASLRTALQAGRAFDPATSTRTFRLYTSDLGQAIFMPPLVAHLR 140 Query: 141 THYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + +PP+ A+ + Q DL + + LF + V + R +P Sbjct: 141 RVAPGIRIVTADPPLDAAQQMMKLGQIDLALGMFTGLHADFHQQRLFHETYVALVRNDHP 200 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEM----FPDRQINFTSYNILTIAALV 254 ++ E A HV P + + + + R + + + +V Sbjct: 201 MIGATLTAEQFFAADHVSYTPTAGSHAHFEAALYALSPHAGSTRHVVLQLAHSFGLERIV 260 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 ++SD++A IPSR +R + + P D + +++ RD + ++ Sbjct: 261 SSSDLIACIPSRLARELARLQDVRAVSLPFDTAPA-DIAQFWHERYQRDEGHQWLRTLVY 319 Query: 315 NAF 317 + F Sbjct: 320 DLF 322 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 141/297 (47%), Gaps = 7/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 L +IDLNLL FE ++ + + AA+ L L A+S ++ +LR++F D LFIR G+ + Sbjct: 5 DLSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIGREMQ 64 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PTA A+ + IS L+ I L+ ++D + T I ++ +VLP + + Sbjct: 65 PTAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLEVCRQ 124 Query: 142 HYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + R + L Q + + + R + LF ++ V +CR G+P+ Sbjct: 125 VAPSIDFRLIGFEKDSVGDLLEQREIHVALGLFQNPPRQTRQMPLFEEHFVGLCRRGHPV 184 Query: 200 LSLE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 ++ E ET L + + + + + R++ T+ ++L + ++++SD Sbjct: 185 VTQESMTPETFARLPQALFTLRRDDIGEIDKVLAQYNLQRRVVLTTPHLLILPTVISSSD 244 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++ +IPSR F+ LE P E + S+ ++K + +D + ++++ Sbjct: 245 LVTVIPSRLLTPFAYKDTLEIFELPVKTEPWM-ISMLWSKLTDQDQASIWLRQMLKS 300 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 7/295 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L +LNLLT F+A+Y H+ + AA+ L+LT A++ ++ KLRV F +PLF+R G+ Sbjct: 1 MDLSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 PT +A L I+ L+S+ LD + Q I L LP I + + Sbjct: 61 HPTPWADALAPKIAHVLDSVRR-LDEPTPFQPQSAKNQFKIYVNDIGMMLALPKIVQLLN 119 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P L + + N L + DL I + L + V R+ +P Sbjct: 120 QDAPHTQLTVIDLRQDEVVNALDVGEIDLAIGYFVGVPNWARQQHLRDTSYVCAMRKDHP 179 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + NA H + + L + + + R I + I L A SD Sbjct: 180 SIGDTMTLTQYLNARHAMYWTHGSTYGRLDEALAKRGFSRDIAVRIPRLGAIPFLAAFSD 239 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + IP LF P++ +P P ++ ++++ D + +I Sbjct: 240 FVVTIPEDLGLLFRDLIPIKLVPVP-ISLPSFQVKQYWHERLHADSAHKWLRTLI 293 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 133/299 (44%), Gaps = 9/299 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +R +DLNLL F+A+ + + AA+ L++T A+S + +LR F DPLF+R G Sbjct: 1 MRDIRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRAIK 140 + PTA A+ L + L + L + TI IA+T + +K Sbjct: 61 IEPTARALALMPSVKTVLAEVNRMLRPVEFDPQTAEMTIKIASTDYGLEAIGTPFLSHLK 120 Query: 141 THYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P++ + P D + Q Q + D+ + + + L T++ V + R +P Sbjct: 121 QLAPKIRVAFLPAQDVDLLAQFEQARIDIALVSTQHIPADLHSKPLLTEHYVCVMRADHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGL-RQRVQEMFPDRQINFTSYNILTIAALVANS 257 + + + + ++ + F G+ + + ++ R+++ + + + ++ + Sbjct: 181 MANQLLNLDNFCELDFAMMSYDGGQFYGVCDEALAKLGKTRRVSVSVNHFSLLPNILRTT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 D++A+IPSR + + + LP + + +++ + +DP + +++ + Sbjct: 241 DVVALIPSRLSHHLTGLI-CKTLPL---EVQGFSLQMAWHERTHQDPAYQWIRNLLVES 295 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 8/292 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 DLNL +F+A+Y + AAKVLNLT A+S ++ +LR DPLF+R+G + PT Sbjct: 4 SRFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRMVPT 63 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 A A + + L L EG +D +RT + + A +LP + Sbjct: 64 ARARAMVSPVRHALGGFQRCLSEEGGFDASEAERTFVLGLRDGLEARLLPALMSQFMDEA 123 Query: 144 PQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + L++ +S +L+ + DL D M ++H V+ +V++ RE +PL Sbjct: 124 PGIKLQSLTVSRRQMATELASGRLDLACDVMLALPEAIEHQVVLEGPLVVLMRESHPLAQ 183 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 D A HVL+ + + R I + + V +D+L Sbjct: 184 G-MDLPDYLAAQHVLVSSRREGPGLEDFGLARQGYRRHIRLRCQHYQAALSTVQQTDLLL 242 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +P+ S L PFP ++ +++++ DP + + Sbjct: 243 TMPASLAGQLSDQ-GLVWKPFPG-GLPGLEMHLYWHRDQSADPAHSWLRQRV 292 >UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=Burkholderiaceae RepID=A9AQZ4_BURM1 Length = 327 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 125/304 (41%), Gaps = 7/304 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + + + +DLNL+ A+ + + A ++L ++ +S ++ +LR F DPLF+R Sbjct: 15 RYWPAMDALDLNLIPYLVALDDTRNVSRAGELLGVSQPRVSTALGRLRAYFGDPLFVRTS 74 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 +G+ PT A+ L L I L +D T +IA + + LP + + Sbjct: 75 RGMEPTPRALALLPAARDALAQIERGLVAPHDFDPAASTHTFSIALSDVGEIVFLPKLLQ 134 Query: 138 AIKTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTN-RTVQHHVLFTDNMVLICR 194 A P LR+ P + L DL + + LFT V + R Sbjct: 135 AFAQCAPHANLRSVSLPHDEVGRGLEAGSIDLAVGYFPDLDGNNFFQQRLFTHRFVCLMR 194 Query: 195 EGNPL-LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 G+PL + E + H ++ E ++ L + + + R+ + + +++ + Sbjct: 195 RGHPLEQARPFTVEQFLESGHAVVRAEGRSQEVLEKYLAKQRMQRRAVLETPHFMSLPFI 254 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 ++ +D++A +P ++ P L + D H+++ DP + V+ Sbjct: 255 LSRTDLIATVPHAIGYAYAAEHAFIVPVEPPLPLPRFDLKQHWHRKFHNDPRTAWLRGVV 314 Query: 314 RNAF 317 + F Sbjct: 315 ASLF 318 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 125/298 (41%), Gaps = 11/298 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L IDLNL +F+A+Y + AA VL +T A+S S+ +LR + DPLF+R G + Sbjct: 1 MNLNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 TPT A ++ + L + ++ ++D + A + A ++P + ++ Sbjct: 61 TPTPAAQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFAARDLLEASIMPRLTAQLQ 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDL-IIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 P + L N I S+ + ++ D + + + + D V+I R + Sbjct: 121 NVAPNITLTNYDISRSNIVSAMASGSLDFYADASSAFVDPHLCKQKIAEDRFVVIARRNH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P LS + +T H+ + + + ++ R++ + LT+ A++ + Sbjct: 181 PALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFLTVPAVIVKT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 D++A +P + P +++ ++++ + D + + I Sbjct: 241 DLIACVPYHLAKHY----DCSIYELP-FELAPVEYFLYWHVSADHDHAHMWLREQIAE 293 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 128/297 (43%), Gaps = 8/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L DLNLL F+ + +G+ A + L +T +A+S ++++LR +F DPLF++ G + Sbjct: 8 HNLNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGSSM 67 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 PT A+ L ++ LE + AL+ EG +D + A+++P + R + Sbjct: 68 EPTPRAIELSTPVALALEEVRKALNQEG-FDPMMASENFRLGMIDYASAMLMPGLVRHMS 126 Query: 141 THYPQLLLRNPPISDAENQ--LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P+ ++ + E L + DL+ V + LF+ V + +P Sbjct: 127 QVAPRAKMQVVDVGGDEEVANLERGAVDLVFSRFQWVPPKVCINRLFSMEYVAVFCPNHP 186 Query: 199 -LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + + + HV P + + + + + EM R I + + A++A+S Sbjct: 187 GVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEKRNIIGKLASFGMLPAMLASS 246 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 ++A++P + +R L P + ++ ++ + RDP ++ Sbjct: 247 HVMAVMPEGAAKVVARPLGLRVEKLP-FKTPLLRMALAWHPRTDRDPSHVWFRQQVK 302 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 17/306 (5%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL + + + + AA L +T A+S +++LR +F DPL +R +G+ Sbjct: 1 MDISRVDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIK 140 T T A L + L I A+ + + + QR I + + ++P + R I+ Sbjct: 61 TATERARELQPLVRGILSDIEQAVQEKTPFAAGESQRVFRIMASDYAESCLMPRVLRRIR 120 Query: 141 THYPQLLLRNPPISDA-ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + L SD + Q + D+ I+ ++ L+T+ + NP+ Sbjct: 121 QEAPHVTLDVLTPSDVSFLDVEQGRLDMAINRFDKIPQSFHQKTLWTEYFACLMNARNPI 180 Query: 200 LSLEDDRETIDNAAHVLLLPEE------------QNFSGLRQRVQEMFPDRQINFTSYNI 247 L +T +A+H+ + Q + + + M RQI+ + + Sbjct: 181 LKEPFTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALGRMGRKRQISVFTRHY 240 Query: 248 LTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILH 307 L D++A +PSR + P + P + + ++ + Sbjct: 241 QVAMLLAEQHDLIATLPSR-AAWLQKDNPNLVVKVPPFEIPPFELKMAWSPLLQHNSDHQ 299 Query: 308 GVIDVI 313 + +I Sbjct: 300 WLRKLI 305 >UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A9CLK9_AGRT5 Length = 325 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 11/302 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L IDLNLL F+A+ + + A + T A+S ++ +LR + D LF+R G+ Sbjct: 8 MNLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGL 67 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 PT A+ L E IS L I L +D + + +IA + G+++LP + ++ Sbjct: 68 QPTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLE 127 Query: 141 THYPQLLLRNPPIS---DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 P + ++ S DA + L DL + + LF + V I R+ + Sbjct: 128 EKAPGIDIKVRDYSSRDDAVSLLDSGGVDLTVGIPPTPTSRILSARLFQERFVCILRKDH 187 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P+L D ET + H+L+ P+ + + R+ T ++ ALVA+S Sbjct: 188 PILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHMHVAPALVASS 247 Query: 258 DMLAIIPSRFYNL--FSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 DM+A + F+ + P P + F + +++ + P + + + Sbjct: 248 DMVATVIESVVAHSGFAERLAVFDFPLP---LNPVPFVLSWHRRNDGHPAQQWLRNGLLA 304 Query: 316 AF 317 AF Sbjct: 305 AF 306 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 119/304 (39%), Gaps = 11/304 (3%) Query: 20 PQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRK 79 L IDLNLL +F A+ + + AA + L+ A+S ++++LR + D LFIR Sbjct: 6 NMHQKNLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRS 65 Query: 80 GQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIY 136 G+ PT L I L+ + A+ ++ D T + L++P + Sbjct: 66 TDGMQPTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLT 125 Query: 137 RAIKTHYPQLLLRNPP-------ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNM 189 + P + LR + DA + L + + DL + F T +L Sbjct: 126 ARVAKQAPNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVIQDFDTPSRFDRELLGASEF 185 Query: 190 VLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 V + R G+P+ E + H++ + +S + + + +M R+I + Sbjct: 186 VCVARAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRIELRVPHYSA 245 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 + A +D++ +P + + L+ P ++K +D + Sbjct: 246 ALSATALTDLVYTVPRILAQHAEQAFGLQVSELP-FEAPVRKIFQVWHKTRTKDFGHQWL 304 Query: 310 IDVI 313 +V+ Sbjct: 305 RNVV 308 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 128/294 (43%), Gaps = 8/294 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL +FEAVY + + A+K LNLT A+S ++++LR F DPLFIR G+ PT Sbjct: 1 MDLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTDL 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L + LE + + S+D R I+ + G LVLP + + + P Sbjct: 61 AEQLAGRVLDALEMLRS-FESRESFDPAGLSRDFRISISDYNGMLVLPRLLKELAEQAPG 119 Query: 146 LLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + + I A LS Q DL++ + + L++D+ V + + Sbjct: 120 VSITTSQIQRAHVSEHLSTGQVDLVLAPKQDV-ANLSYEPLYSDDYVGVASAHYGPEGGQ 178 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAII 263 E H+L E S + + ++ R++ S ++ TI ++ S +A + Sbjct: 179 MSLEEYCQREHLLFSLEGYGRSTVDVALSKLGKKRKVVLRSSHVHTIPHVLEGSAFIATL 238 Query: 264 PSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 P + + + L P + + +H++ DP + +I+ F Sbjct: 239 PRLITLDYLKRFELTSFSLP-FELKGHEVGLHWHARQHHDPAHEWLRGLIKELF 291 >UniRef50_A4Z170 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z170_BRASO Length = 313 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 140/303 (46%), Gaps = 8/303 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 K +L ++DLNLL +FEA+ + + AA + L + S+++ +LR +F DPLF+R Sbjct: 2 KNDQMPSLAHVDLNLLVLFEALLSERNVTRAAVRVGLAQPSASKALDRLRHLFGDPLFLR 61 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVI 135 G+ PT A+ L I+ LE + + E +D + ++ +A + + ++LP + Sbjct: 62 APGGMRPTPRALELAPEIALVLERVRALVAAELPFDPATARGSLRLAMSDAAEFVLLPGL 121 Query: 136 YRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 + P + L+ P+ +L + + D ++ + + LF + V + Sbjct: 122 VAQLAGTAPGVTLQARPLDKDRVFAELDEGRLDAVVGVFRELPKRFRSAPLFEERFVCLA 181 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 R +P L+ ET H+L+ + + ++ + R++ T L + + Sbjct: 182 RADHPRLATGLTLETYVELPHLLVTLRDDRKGAVDDALEAIGLHRRVAATLTRFLALPPV 241 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +A SD +A +PSRF + L + P L + + + + R+P++ + +I Sbjct: 242 LAFSDAIATVPSRFAAASAPNCRLHE---PPLALPRWTEQLVWRAGAEREPMIAWGLQLI 298 Query: 314 RNA 316 R+A Sbjct: 299 RSA 301 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 124/300 (41%), Gaps = 8/300 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L IDLNLL +F+A+Y H+ + AA + ++ SA S I +LR F D LF+R + Sbjct: 1 MDLHQIDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIK 140 PT A + +++ Q L I A++ +D I+ T +LP + + Sbjct: 61 QPTPRAEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVS 120 Query: 141 THYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRT--VQHHVLFTDNMVLICREG 196 P + L L + D + + ++HH +D+ + R+ Sbjct: 121 HQAPNIKLTVIGAKAPQPLTHLENNEVDFALGFSHEIEASSLIEHHTWLSDSYCTVARKN 180 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +P L+ D +T HV + P + + Q + + R ++ ++L + + Sbjct: 181 HPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQVLAQHKLKRHVSLQLPSVLVAPHSIIH 240 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 SD++ +P ++ +E P ++ +I+++K + + + ++ Sbjct: 241 SDLILTMPRIVAEQVAKQVEIEIF-TPPISIPDYHLNIYWHKINADKASFKWMKQLFQSL 299 >UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q46YJ7_RALEJ Length = 394 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 117/312 (37%), Gaps = 8/312 (2%) Query: 11 LSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVI 70 SR + P ++D LL + + + + A L + AIS ++++LR I Sbjct: 68 ASRPHAGRAPIAMHGRDHLDTYLLRVLHTLLTEQSVTRTAVRLGQSQPAISNTLKRLREI 127 Query: 71 FPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSV 127 D + +R G+ PT L E Q L ++ +D RT + + Sbjct: 128 TGDAILVRGKSGMVPTERGRELLELAEQSLAAMDRIARPPQQFDPATTTRTFHLGAPDYL 187 Query: 128 GALVLPVIYRAIKTHYPQLLLRNPPI---SDAENQLSQFQTDLIIDNMFCTNRTVQHHVL 184 A LP I ++ P L P+ SD L Q Q D++I N + L Sbjct: 188 DAFFLPNIVERVRRLAPGAKLFVHPMTSSSDFLEDLEQGQLDIVIGNWLSPPEHLHISPL 247 Query: 185 FTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQ-NFSGLRQRVQEMFPDRQINFT 243 F D +V + +PL + H+ P S + Q + E R I T Sbjct: 248 FDDEVVCMLGAQHPLARKGLTLKHYLEMPHLAPAPYASMQRSMIDQALAEQGYKRNIQVT 307 Query: 244 SYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRD 303 + ++ +DM+ +F +++ P+ +P P + ++ F +++ Sbjct: 308 LPYFGLVPYVLMKTDMVFTTGRQFAAHYAQYLPIRMVPSP-VTFPRMRFYQLWHERCHAA 366 Query: 304 PILHGVIDVIRN 315 P + + +I Sbjct: 367 PDVMWMRRMIAE 378 >UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Burkholderiales RepID=Q2KYC5_BORA1 Length = 306 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 131/303 (43%), Gaps = 5/303 (1%) Query: 18 GKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFI 77 K + LR +DLNLL +F+ + + I A+ L+L+ A+S ++++LR+ F D LF+ Sbjct: 2 NKGGVVDALRKLDLNLLVVFQHLLEERNISAVARRLDLSQPAVSNALRRLRLAFGDELFV 61 Query: 78 RKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPV 134 R QG+ PT A + +S+ L + D +D QR + IA + + +P Sbjct: 62 RTAQGMLPTPLAEGMGGQVSEALSLLSHLADAAQPFDPATSQRRLRIAMSDAGEIHFMPT 121 Query: 135 IYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICR 194 + H P + + + +D + +L + DL + + +LF + R Sbjct: 122 LMELCARHVPGVRIDSLRCTDLQRELDTGRVDLALGAFDGLGSGIVQRMLFRQGYATLFR 181 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 G+P H+++ + Q ++ Q F+ + + +V Sbjct: 182 AGHPRAYAGMSARAFRAEQHLVVS-RAAPDGQINQALERAGVVLQEQFSVPHFAAVPYIV 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + +D+LA +P + + + L+ L P + + ++++++ RD + +I Sbjct: 241 STTDLLATVPEKLAASAAPRFGLQVLTLP-IKVPLLQTNLYWHRRFQRDGANQWLRGLII 299 Query: 315 NAF 317 + F Sbjct: 300 DTF 302 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 11/305 (3%) Query: 22 IFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 +F + R +DLNLL +FEA+ + AA L +T A+S ++ +LR DPLF+R G Sbjct: 1 MFVSFRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGT 60 Query: 82 GVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRA 138 G+ PT A+ L E I + LES+ GALD E +D R +++ + V +LV+P + Sbjct: 61 GIRPTQRAVVLWEPIGEALESVRGALD-EQVFDPARAQTEFSLSMSDYVSSLVMPDLLGH 119 Query: 139 IKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMF---CTNRTVQHHVLFTDNMVLIC 193 + P+ + P + + +QL + D ++ ++ L+T + Sbjct: 120 LGKVAPKARVHTVPNTILEIADQLEDNRVDCVMSVYVNEAQQPAAIRSRSLWTVDYACFM 179 Query: 194 REGNPLLS-LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 R G+PL T NA HV + + + R + T + Sbjct: 180 RRGHPLAGMKRLSTRTFLNAGHVDVSLAGKTMPSYDLFLASRGLSRNLVATVNHYSAAYE 239 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 +V SD++A++PS + L +P P +I S+ +++ + P + + Sbjct: 240 VVRQSDLIAVLPSDLRSQSRHAPLLHAMPLPLQAPPRI-VSLFWHQRNDTVPAQRWLRET 298 Query: 313 IRNAF 317 + F Sbjct: 299 LVEMF 303 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 135/299 (45%), Gaps = 10/299 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L +IDLNLL +F+ + + AA LN++ A+S+S+ +LR +F DPLFIR G++ Sbjct: 21 LSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLSA 80 Query: 86 TAFAMHLHEYISQGLESILGALDIEG--SYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 TA L ++ L+ + + +R ++TT VLP I + Sbjct: 81 TAKTQDLAPLLADTLKGLESLIQPSEFTPQSSKRRFILSTTDFGTLTVLPKILDKFRQKA 140 Query: 144 PQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNR-TVQHHVLFTDNMVLICREGNPLLS 201 P +L D +L Q D+ + + ++ L +D MV + R+ +P + Sbjct: 141 PDAILDVKSWNEDMVAELDQTNIDVAVAVLSKEPPAGIRAMRLKSDRMVCLARKNHPRIE 200 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + E+ +HV ++ + + + + +++M R ++ N + A +V +SD+L Sbjct: 201 GKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPAARVVMDSDLLL 260 Query: 262 IIPSRFYNLFSRCWP---LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +P F + + +LPF + D+S+ +++ D ++R AF Sbjct: 261 TVPKLFAEDMAATVSEIVVHELPF---ASREFDYSMIWHERFQHDAAHVWFRGLLRQAF 316 >UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD9_BURXL Length = 305 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 119/291 (40%), Gaps = 7/291 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNL+ F A+Y + AA+ LNLT +S ++ +LR + DPLF R +G+ PT A Sbjct: 12 DLNLIRAFVAIYETGSVSAAARRLNLTQPTVSYALSRLRTLLHDPLFSRTREGMAPTFNA 71 Query: 90 MHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 L+E Q L+ I GA+ +D R IA + LP + ++ P + Sbjct: 72 SQLYETFRQALDRIEGAIAATRYFDAATSTRCFRIALSDLGELYFLPRMVERLQRTAPGV 131 Query: 147 LLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 L + L+ Q D + N+ + LF++ + +P + Sbjct: 132 ELEVVQLDVERTAEWLNTGQIDAAVGNLHLVGGKARRRYLFSETYSCLVSHRHPWIGTTL 191 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 A HV + + + M R+I + + +VA SD++ +P Sbjct: 192 SLGDYVRAKHV-VGASSSGHRLVEDVMTGMGLSRKIALRVPHFTNVVDVVAGSDLVLTLP 250 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +R N++ + LP P + + D ++++ + + ++I Sbjct: 251 ARVANVYQSTGTVRALPLP-VPVDPFDVNLYWQDRATDLSAQKWLCEIIAE 300 >UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=Vibrio mimicus VM573 RepID=D2YJX0_VIBMI Length = 314 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 74/300 (24%), Positives = 143/300 (47%), Gaps = 8/300 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LR+ DLNLLT+F+AV + AA LN+T +A+SQ++ +LR +PLFIR+G+G+ Sbjct: 14 MLRDYDLNLLTVFDAVMTLGSVNKAADKLNMTSAAVSQNLSRLRDQVGEPLFIRQGRGLQ 73 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PT +A+++H+++S GL +I L+ +D R I +VLP + R I Sbjct: 74 PTQYALNMHKHVSAGLSAIRFGLETNACFDPATSTREFVIGGHGYFDLVVLPQLLRKISE 133 Query: 142 HYPQLLLRNPPISD----AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 P + + P D LS+ + DL + ++ ++ ++ + + +V++ + + Sbjct: 134 VAPHITVNLKPYEDDHFTPSQVLSEREADLFLASLPISHPSIITTQIAEEALVVVYAKNH 193 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P L + + H L + + P R++++ S ++L + A + + Sbjct: 194 PRLGETLTFQQFFDEKHTALTSRRFGHYLFSSLLDQALPARKVHYQSDSMLNLMATASVT 253 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 D+L P R ++++ L P P + + ++K +D L + + I F Sbjct: 254 DLLCFTPKRLADMWAEKLGLHIQPLP-FEMRPVPTFMCWHKAKQQDKGLIWLREQIEEVF 312 >UniRef50_P52679 PCP degradation transcriptional activation protein n=1 Tax=Sphingobium chlorophenolicum RepID=PCPR_SPHCR Length = 307 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 8/292 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 + L L +F+A+Y H AA L++ +S+ + +LR F DPLF+R G+ PT Sbjct: 6 LPLGHLMVFDALYRHGSAGKAAHALSMPQPTLSRWLAQLRTHFDDPLFVRTRSGMEPTPL 65 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A +I++ + + E +D R IA + AL+LP +Y ++ PQ Sbjct: 66 AARAAPHIAEMIAIYRQHVRSELRFDPGTSNRNFRIAASDFGQALMLPRLYATLEETAPQ 125 Query: 146 LLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + + + +L D+ + ++ LF + V + R+ +P L+ Sbjct: 126 VRVTGVNLRHGPLVEELESGSIDIAFGGFPTLSAGIKTQTLFREEYVCVMRQSHPALTHG 185 Query: 204 DDRETIDNAAHVLLLPEEQN--FSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 D E H+++ E N + R+ E+ P I FT+ N L A + +D++ Sbjct: 186 LDLEAFRQCRHIIVTAHEFNHVHEQVEARLLELLPPESIRFTTENFLVSAVIAEETDVIL 245 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 IPSR F+ L P P + I+ ++++ +DP + VI Sbjct: 246 TIPSRLARWFANRGGLTIFPVP-IELPSIEVKQYWHERYDKDPGNIWLRRVI 296 >UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=cellular organisms RepID=A1UXD8_BURMS Length = 355 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 133/282 (47%), Gaps = 5/282 (1%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY 95 +F+A+ + + AA L+++ A+S ++ +LR +PLF R +G+TPTA A L+E Sbjct: 59 VFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEP 118 Query: 96 ISQGLESILGALDIEGSY--DKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLL--RNP 151 + Q L + L + + D ++ ++LP + IK+ P ++L ++ Sbjct: 119 VRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQSD 178 Query: 152 PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDN 211 QL+ DL ID + N + + L +++V+I R G+P + + Sbjct: 179 DAGSIPAQLTTGTLDLAIDYLHFDNPELCYEPLHEEHLVVIGRAGHPAFAGGLALRGYEE 238 Query: 212 AAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLF 271 + HV + P ++ S L + R ++ + LTI ALVA SD+L IP R F Sbjct: 239 SGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLGTIPRRLAERF 298 Query: 272 SRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + + L+ P P ++ I S+ +++ P L + + + Sbjct: 299 ADVYALQIAPLP-IDIAPIQVSLIWHRQQDAQPGLRWLREQV 339 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 5/290 (1%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNLL IFEAV + + AA+ LN+T A+S ++++LR I D LF++ GV+PT Sbjct: 4 QIDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPSGVSPTP 63 Query: 88 FAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ L I +GL I AL + +T T+A AL LP + + P Sbjct: 64 KALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPILAHSAPN 123 Query: 146 LLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + +R P ++ A L Q + DL + + + ++ + D + I R+ +PL Sbjct: 124 INIRIVPNTNINAAKLLEQSEIDLAMGRFYRSTVRLRVQEIIGDRYICIMRKDHPLAHKR 183 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAII 263 + A H+L+ + + ++++EM R+I T + L+A SD+++ I Sbjct: 184 LTLKQYIKADHLLVTLTGEATGLVDKQLREMDLSRRIALTVNQFTLVPELIAGSDLISAI 243 Query: 264 PSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 P R L P + +++ S DP + + Sbjct: 244 PLRMVERNPFRTDLHITELPLKIAPAF-LQMMWHERSQVDPAHEWLRSQL 292 >UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKM3_HALO1 Length = 307 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 113/296 (38%), Gaps = 7/296 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L I+LNLL +A+ + + AA+ ++ A+SQS+++LR IF D L R + Sbjct: 4 PRLSEINLNLLVSLDALLTERSVSRAARRTGVSQPAMSQSLRQLRAIFDDALLARDRGVL 63 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L + L ++ LD E +D +R TIA +LP + Sbjct: 64 VLTPAAERLMVPLRHALVAVQRVLDGEKPFDPGRAERRFTIAVGDFAAVTLLPPLLERAS 123 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + P +L+ + DL+I + +L+ D V + R +P Sbjct: 124 REAPGIGFDVRPAEPTRLFERLATGEFDLVIGAKLDASGDFMRQLLYRDGFVCMARRDHP 183 Query: 199 -LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 L D E HVL+ P + S + + + E R+I L +V S Sbjct: 184 ELSGDALDLERYAALPHVLISPTGEGPSVVDRLLAERGKQRRIALRIPYFLAAPLMVVRS 243 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 D++ P F+ L P L +++ D + +++ Sbjct: 244 DLVLTAPRSVAGAFASTHALALFE-PPLELPSFGVYQLWHQRYQSDDAHRWLRELV 298 >UniRef50_C5AL93 Transcriptional regulator, LysR family protein n=13 Tax=Burkholderia RepID=C5AL93_BURGB Length = 331 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 132/298 (44%), Gaps = 9/298 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +L +DLNLL +F A+ + + A L L+ A+S S+ +LR +F DPLF+R G Sbjct: 1 MRSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + PT + L +++ L+++ AL +D R ++ + + LP I + Sbjct: 61 MQPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEV 120 Query: 140 KTHYPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE-- 195 P ++++ P+ + E+ L + D I N+ +H VLF + V + R Sbjct: 121 NRLAPNIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTARTRHQVLFEEGYVCMMRRRV 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 G P A+HVL+ E + L ++ R I + + + ++A Sbjct: 181 GGP-ARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPHFVALPRVLA 239 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +D +A +P R +F++ + P + + ++H+++ D + + ++ Sbjct: 240 VTDFVATLPRRLAQIFAKDGAFDIFELP-VAIAPVGVTMHWHEHFHEDEGIAWMRQLL 296 >UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WDE8_PSYWF Length = 302 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 6/297 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +ID+ LL +F+A+Y I AA+ L++ A S + KLR F DPLF+R G + P Sbjct: 1 MFDIDVRLLLLFQAIYQQNTISKAAQKLDIGQPAASLGLNKLRQHFDDPLFVRVGNQMQP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A +L ++ L+ I D ++ + R I+ T +++P + + +K H Sbjct: 61 TQTAQNLFPLVNNALQHIRAVNDYTHHFEPKNSSRRFHISMTDISHMIIVPKLIKYLKQH 120 Query: 143 YPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P L I SD +++S + DL I + F + ++ R+ +P L+ Sbjct: 121 APHTKLDISAINSDTPSRMSSGEIDLAIGYIPHLEAGFFQQTFFEQHYSVVVRQDHPRLT 180 Query: 202 L-EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E H ++ L ++ R I T L + ++ +D++ Sbjct: 181 QNTLTLEAYQQEQHADVISSGTGHYLLEDHLRRRHIKRHIAITLPTYLGVGLIIQQTDLV 240 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 A +P + L + L LP P L+ + H+++ +P + V F Sbjct: 241 ATLPDKLAKLLLQENRLHTLPLP-LDIPKYQVKQHWHERMHANPDNQWLRQVCYALF 296 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 7/295 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + ++DLNL+ F +Y + + A++L +T ++S S+++LR F D LFIR G+ P Sbjct: 28 MADVDLNLIRTFVLLYETRSVTRTAELLFITQPSVSHSLRRLRRQFNDDLFIRSSDGLAP 87 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T A ++ + Q LE I + G +D RT I T +LP + A++T Sbjct: 88 TVLAASMYPQLHQALEVIDETVSGVGHFDAETSDRTFRICATDLGEISLLPGVLAALETR 147 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P ++ P+ A +L Q + D +I ++ LF + V +C G+P + Sbjct: 148 APGCAVQVTPLDFASAAEELRQGRADAVICTPRIDAPDLRRDPLFREGYVGLCALGHPRI 207 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 +E + H+++ Q + M R I + + LVA + L Sbjct: 208 GVEPGLDDFLAERHIVVDAA-AGHVDADQALARMGRRRDIAVRVPHFAVLPELVAQTRHL 266 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 A++PSR LF+R P+ P + ++ S+ + +L P + + ++I + Sbjct: 267 AVVPSRVAELFTRSSPVRTFALP-VEIPNVEVSLFTVRRALPSPGVDWLRELIAD 320 >UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogoltabida RepID=Q687Z9_9SPHN Length = 318 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 117/289 (40%), Gaps = 7/289 (2%) Query: 35 TIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHE 94 IF + V + + AA+ L +T +S ++++LR I D LF R G+ PTAFA+ + E Sbjct: 26 RIFHRMMVDRKVSAAAEALGITQPGVSNALKRLRDITDDELFTRAPGGMEPTAFAIQIAE 85 Query: 95 YISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRN- 150 IS L + A + +R + T A +LP I P + Sbjct: 86 PISYALAMVDAAFTQPTDFKPASDRRLFRLGLTDIGEAYLLPKILARTAEIAPHVSFTTI 145 Query: 151 -PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL-SLEDDRET 208 PP S+ ++ DL ID H L + V+ R+ +PL E Sbjct: 146 RPPKSEIREEMEVGSLDLAIDVFPNMKGNFVHRRLLKEKHVICMRKDHPLANKAEWTMAD 205 Query: 209 IDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFY 268 HV+++ + + + R I + L++ ++ ++++A +P Sbjct: 206 YIAQEHVVVIAQGTGHGDIDALLARKGISRNIRLMLPHFLSLGPVMHATNLVATLPEDAA 265 Query: 269 NLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 L + L LPFP + + + +++ RDP + +++ F Sbjct: 266 LLLEEPYELISLPFPGI-LPIVHVDVFWHRRLHRDPANVWLRNLVYELF 313 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 131/293 (44%), Gaps = 9/293 (3%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 R +DLNLL EA+ + + + AA L+L+ A+S + +LR +F DPL I +G+TPT Sbjct: 4 RRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGMTPT 63 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIKTHY 143 A+ L + Q L+ + + +++ T++IA T V A ++ + A++ Sbjct: 64 VKALELLVPLRQALDQVRATVTTHLNFEPATASLTVSIACTDYVQAALIKHLVVAMRREA 123 Query: 144 PQLL--LRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + LR + E Q+++ + DL + NM + L+ ++ VLI R G+P L Sbjct: 124 PGVRIALRILDVPQLELQMTRGEVDLAVINMNGAPPALHAQHLYDESYVLIGRRGHPSLH 183 Query: 202 LEDDRETIDNAAHVLLLPEEQNFS-GLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + HV++ FS + + R + ++ + L + LVA SD + Sbjct: 184 AGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLRRNVVLSASSFLPVPELVAQSDCV 243 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 A++P R P P E + +++ S V + I Sbjct: 244 ALVPRRLVEGRDEQLLCVAPPLP---VEGFAIGMFWHERSDGHAGFRWVREFI 293 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 10/304 (3%) Query: 18 GKPQIF-TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLF 76 P IF + N DLNLL +F+ + + + AA+ L LT +S ++ +LR DPL Sbjct: 19 RMPYIFGMNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLL 78 Query: 77 IRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLP 133 +R G+ + PT A+ L I L+ I L ++ QR+ + IA T V L +P Sbjct: 79 VRVGRRMRPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMP 138 Query: 134 VIYRAIKTHYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVL 191 + ++ P + + ++ L + DL++ H + + + Sbjct: 139 PLLARLELLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGRFDEVPARFTRHPWRRETLQI 198 Query: 192 ICREGNPLL--SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 R+ +P L D + H+ + Q + Q + E RQI +T+ N L Sbjct: 199 ALRQQHPHLVPGQALDLDAFLGLRHIWV-HGGQTRGMVDQWLAEQGLTRQIAYTTPNYLQ 257 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 A L A +DM ++P + F+ PL P E + + + DP L + Sbjct: 258 AAHLAAATDMCVVLPRQLAQQFAHLLPLAVYELP-FALEPFELEVVHLSHRQHDPALAWL 316 Query: 310 IDVI 313 ++ I Sbjct: 317 VEQI 320 >UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=Vibrio RepID=A5F3E5_VIBC3 Length = 308 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 143/298 (47%), Gaps = 8/298 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR+ DLNLLT+F++V + AA L +T +A+SQ++ +LR DPLFIR+G+G Sbjct: 1 MIMLRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + PT +A+++H+++++GL +I L+ + +D +R I +VLP + + I Sbjct: 61 LQPTQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKI 120 Query: 140 KTHYPQLLLRNPPISD----AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 P + + D LS+ + DL + + ++ ++ + + +V++ + Sbjct: 121 SDIAPHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAK 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +P L E H L V ++ P R++++ S ++L + A + Sbjct: 181 NHPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATAS 240 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +D+L P R ++++ L+ P P + + ++K +D L + + I Sbjct: 241 VTDLLCFTPKRLADMWAEKLGLQIQPLP-FEIRSVPTFMCWHKAKQQDKGLIWLREQI 297 >UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=Proteobacteria RepID=C4I668_BURPS Length = 297 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 10/284 (3%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY 95 +A+ + AA LNL+ ++S + KLR IF DPL + +G+ PTA A L E Sbjct: 14 TLDALLSEHNVTRAAARLNLSQPSVSIHLAKLRDIFGDPLLLPGPRGMRPTARADELREP 73 Query: 96 ISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPP 152 + + LE++ A+ +D T +A + + V+ ++ P L Sbjct: 74 LRRALETLGRAVSPGAPFDPAASAHTWRVAASDYSESTVVLPALNGLRAAAPGTRLAVVE 133 Query: 153 I--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETID 210 S Q Q DL C ++H LFT+ VL+ R G+P L Sbjct: 134 TVPSRIAKQAEQGDIDLAFHITECAPGNLRHRALFTERYVLVGRAGHPRLKRRPTLAQFC 193 Query: 211 NAAHVLLLPEEQNF-SGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYN 269 HV++ P+ F G Q + ++ R++ + + L + + VANSD++A++PSR Sbjct: 194 KLDHVIVSPDGGGFQGGTDQALAKLGLARRVVLSVPHFLFMMSAVANSDLVAMMPSRLVR 253 Query: 270 LFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 SR + + P ++ ++ +++ S RDP + + I Sbjct: 254 D-SRALQVVE---PPVDVPGFRMAMLWHERSHRDPAHQWLREHI 293 >UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=Betaproteobacteria RepID=C4KB22_THASP Length = 333 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 127/306 (41%), Gaps = 6/306 (1%) Query: 18 GKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFI 77 + +LR+ DLNLL + AVY + AA+ L L+ +S ++ +LR +PLFI Sbjct: 16 NNTRARMSLRDFDLNLLRVLLAVYEAGSVSRAAEHLGLSQPTVSSALGRLRRALGEPLFI 75 Query: 78 RKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPV 134 + GVTPTA L L + + +D + +T+A + + LP Sbjct: 76 KTASGVTPTARTHALASSARAMLARLETDFFVADRFDPAKYEGNLTVALSDVGELVFLPR 135 Query: 135 IYRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNR-TVQHHVLFTDNMVL 191 I +++ P +L + ++ + + + DL I + L V Sbjct: 136 ILDSVRRLAPLAMLDSVTLAPGELMRAMEDGEVDLAIGYYPDLDAAGFYREKLLDHRFVC 195 Query: 192 ICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 + R +P+ + E + H + + ++ + ++ + R+I + + +++ Sbjct: 196 LLRADHPVQDRQLSLERFLSLEHAAVRAKGRSQEIFEKYLERLRIQRRIVLRTPHFMSLP 255 Query: 252 ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVID 311 ++ SD++ +P + F+R ++ P L I+ H+++ DP + Sbjct: 256 GIIGRSDLVVTLPHAIGHYFTRVGEKVRMAEPPLAIPHIELYQHWHRGFHHDPRNRWLRT 315 Query: 312 VIRNAF 317 ++ F Sbjct: 316 LVAGLF 321 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 72/310 (23%), Positives = 138/310 (44%), Gaps = 18/310 (5%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L IDLNLL + + + + + AA L+L+ SA+S+S+ +LR DPLFIR Sbjct: 1 MNLDNLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTA 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRA 138 G+ PTA A L + + L+ + +R + A S ++P Sbjct: 61 HGLKPTAHAALLGQQLPDMLQGLYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGP 120 Query: 139 IKTHYPQLLLRNPPISD-AENQLSQFQTDLIID----------NMFCTNRTVQHHVLFTD 187 + + P L L + ++ + + L + Q D I + + H LFTD Sbjct: 121 LLNNAPNLRLDSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTLFTD 180 Query: 188 NMVLICREGNPLL----SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFT 243 + V + R+G+P+L + + D + +HV + E + L + + R ++ T Sbjct: 181 HQVCLVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLSTT 240 Query: 244 SYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRD 303 + A++ A+SD++ +PS F + + LE+LP P + + + + +++ + + Sbjct: 241 VPDFYGAASVCAHSDLIFTLPSSFAAHARKLYALEELPLP-FDFHSLAYVLLWHERNDDE 299 Query: 304 PILHGVIDVI 313 P + + I Sbjct: 300 PGHKWIRETI 309 >UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=A3YHF6_9GAMM Length = 308 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 127/291 (43%), Gaps = 4/291 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + DLNL+ IF+A+ K I +AA L +T ++S ++ ++R + DPLF+++G+G+ P Sbjct: 1 MAKTDLNLVVIFDAIMKEKSITSAADSLAMTQPSVSNAVSRMRHAWKDPLFVKEGRGIRP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 T +A L + +++ L I A+ E + + I T ++V P + I+ Sbjct: 61 TPYATKLWKRVAEPLAQINHAIAPEYFDPLTSKASFRIGITDGSASIVWPELRHIIEQEA 120 Query: 144 PQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 P + + P D E L+ DL+ D + + + ++ + V + R + L + Sbjct: 121 PNINIYAVPYKVDGELLLNNADVDLVFDYYDGNSDEIFYKSMYENQFVTVMRADHELANE 180 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 E E + H+L+ + ++ E+ R+ T + + L+ + ++ Sbjct: 181 ELTLERYIKSEHLLVSLSGDVCGIVDDKLAELNAKRRTAMTVNSFASAINLIKQTRLIIT 240 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +P L P P L I S+ ++ + L +I V+ Sbjct: 241 MPYPIIAEHLAAGDLVLKPVP-LELPSIKISLAWHSRNNHSQALKWLIKVL 290 >UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria RepID=Q3JR86_BURP1 Length = 508 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 62/322 (19%), Positives = 119/322 (36%), Gaps = 10/322 (3%) Query: 4 NNQIEPCLSRKSSEGKPQIFTTLRN-IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQ 62 N I P + + + R ID LL + + + + + AA LN + AIS Sbjct: 181 KNHIPPPAIDQPGHINGESMSQQREAIDTYLLRVLHTLLMERSVTRAAVKLNQSQPAISA 240 Query: 63 SIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTI 119 ++++LR I DPL +R G+ PT + + L E + L I + ++D R Sbjct: 241 ALRRLRDITGDPLLVRGKSGMVPTEYGLRLLEPVQNALREIERIKFQQHNFDPATSIRCY 300 Query: 120 TIATTPSVGALVLPVIYRAIKTHYPQLLLRNP---PISDAENQLSQFQTDLIIDNMFCTN 176 I + L +P + + P L P D E L + D+++ N Sbjct: 301 RIGCPDYLNVLFVPTVVERFRQAAPNATLEFHSLGPAFDYELALEDGKLDIVVGNWPEPP 360 Query: 177 RTVQHHVLFTDNMVLICREGNPLLS-LEDDRETIDNAAHVLLLPEEQN-FSGLRQRVQEM 234 + LF D +V + +P + NA H+ P + + Sbjct: 361 EQLHLSNLFVDEIVCLMSNSHPFAKRGGLTLDQYLNAPHLAPTPYSVGQRGAIDVHLARE 420 Query: 235 FPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSI 294 R + T ++ SD++ F + +++ PL +P P L+ + + Sbjct: 421 RLKRHVVVTLPYFNLAPYVLVKSDLIFTTTRLFADHYAKFLPLSVVPAP-LDFPPMQYYQ 479 Query: 295 HYNKFSLRDPILHGVIDVIRNA 316 +++ + + ++ A Sbjct: 480 LWHERCHYSDEVRWLRGLVAEA 501 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 126/292 (43%), Gaps = 5/292 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++ +L LL IF+A+ + + AA L +T A+S +I ++R I+ DPLF+RKG+ + P Sbjct: 1 MKTQELQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEP 60 Query: 86 TAFAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 T++A+ L + + + ++ A+ +RT IA T + ++ + ++ Sbjct: 61 TSYALSLWDQVGDPMFALTNAVSATQFDPASARRTFRIAVTDVIVEMIWRQLIDLLEREA 120 Query: 144 PQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + + P + + L DL I + + +++ L VL R +PL Sbjct: 121 PGVDVHAVPYTPEGSYDDLRSAHVDLAIGVLNQHDYSLRSTWLLDSGFVLAMRADHPLAG 180 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + E A H+L+ + + + R+I T + ++ ++ S+++A Sbjct: 181 RQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVPQVLRESNLIA 240 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +P L P + + + ++ R+P + + + I Sbjct: 241 AVPELISQDCGFVDGLWMGELP-FDVDPTSLYLIWHARHDREPGIIWIRNHI 291 >UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08NF6_STIAU Length = 322 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 70/292 (23%), Positives = 126/292 (43%), Gaps = 6/292 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 L +ID NLL + +A+ + A+K + L+PSA S ++ +LR + D L +R G+ + Sbjct: 14 QLSSIDTNLLVVLDALLQEGHVGRASKRVALSPSATSHALARLRELLGDELLVRAGRQLV 73 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 T A+ L + Q +E + L S+ + T + TT + ++L + R + Sbjct: 74 LTPRAIALAPQVRQLMEQMERILRPAESFHPAKLEHTFRVLTTDHIEFVLLRPLDRFLTD 133 Query: 142 HYPQLLLRNPP-ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P+++L N P + DA +L + DL + LF D V + REG+P+L Sbjct: 134 EAPRVILHNRPMVPDAVEELRGGRADLAFGVFTDLPDDISSQELFKDRFVTLVREGHPVL 193 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + + HVL+ P S + + E R++ T + L+ VA SD Sbjct: 194 ARPLTLKRFAELDHVLVAPRGTATSRMDLLLAERNLKRRVVRTLGSFLSAPFFVAQSDHA 253 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 + +R + + L L P E + +++ DP + + Sbjct: 254 VTLSARIADALAPLLGLRVLEPPIAYE--YTLTQIWHRRWDADPAHAWLRQL 303 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 6/290 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +D L F A+Y + AA LN++ S ++KLR F DPLF+R GQ + PT Sbjct: 5 LDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPTPR 64 Query: 89 AMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKTHYP- 144 A + + L+ L ++ + QR TI T +LP++ A++ Sbjct: 65 ADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQQAAD 124 Query: 145 QLLLRNPPISD-AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + + + N L + DL I + +V LF + V + E +P + + Sbjct: 125 GITFTIQNLDEQTLNALESGKCDLAIGYLTQLPDSVYQQHLFDQSYVCLAAENHPRIRTQ 184 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAII 263 E H+ + E + +R+ E R+I T + L LVA SDM+A++ Sbjct: 185 LRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGELVAESDMIAVV 244 Query: 264 PSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 P + +R +P P P +I +++ RDP + +I Sbjct: 245 PEQVARHITRRYPCRSWPLP-FPLARIAIRQVWHQRLHRDPGHIWLRSLI 293 >UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q081Z6_SHEFN Length = 303 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 139/289 (48%), Gaps = 7/289 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNL +F+A+Y I AA VLNL+ A+S S+ KLR F D LFIR+G + PT Sbjct: 2 KIDLNLFVVFDAIYCEGNITKAASVLNLSQPAVSHSLGKLRTHFDDALFIRQGNEMRPTP 61 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 A ++ + + + L + L ++ +++ +++ S+ LP++ +++ P Sbjct: 62 VAKNVIDDVREALHQLQVCLVQSRQFEPLTSRKSFSLSLHGSLEPYYLPILQQSLSLESP 121 Query: 145 QLLLRN---PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 + L + ++ EN+L+ DL ID + + + H L D +V++ R+ +P ++ Sbjct: 122 SINLSSNKRVRRTELENKLASGDIDLAIDTLIPVSNNIMHTQLELDQLVVVARKNHPAMN 181 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + D T HVL+ S + + R+I+ + L+ ++ N+DML Sbjct: 182 PDLDLATYLKLDHVLVSSRSTGPSLEDFELSRIGLHRKISLRCQHALSACRVILNNDMLL 241 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVI 310 +P ++S+ ++ P P + I ++++ ++P + Sbjct: 242 TLPKTAAAMYSKMLDIDIHPMP-VELPDIGVHLYWHVNVDKEPANKWLR 289 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 79/318 (24%), Positives = 129/318 (40%), Gaps = 14/318 (4%) Query: 10 CLSRKSSEGKPQIF-TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLR 68 C S KS I R DLNLL F A+ + + AA+ L L A+S ++++LR Sbjct: 5 CPSIKSFNVMANIIENDFRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLR 64 Query: 69 VIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTP 125 F D LF+R QG+TPT A+ L I L+S+ AL +D QR I + Sbjct: 65 ETFGDELFVRTPQGMTPTPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSD 124 Query: 126 SVGALVLPVIYRAIKTHYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHV 183 S+ L++P I + P + L R+ + A L +L + + Sbjct: 125 SLELLLMPEIMARLAAAAPGVKLIARSTDSTRAAAMLDDGAIELAVGVFRECVPWQRLMP 184 Query: 184 LFTDNMVLICREGNPLL----SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQ 239 LF+ V + NP L + HVL + + +R++ +R+ Sbjct: 185 LFSWRFVSVY---NPQLVRTRRKHLSMDEFLRHRHVLTSFSAELRGFIDERLELQGLNRE 241 Query: 240 INFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKF 299 + F+S N T +V + +A +P ++ L P P + S+ + Sbjct: 242 VVFSSSNFATSPFIVQRTAAIATVPEFIGRVWRDTLGLALSPLP-FEVPGYEVSLMWAAA 300 Query: 300 SLRDPILHGVIDVIRNAF 317 +DP L + +AF Sbjct: 301 HDQDPALAWLKREFADAF 318 >UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=Sorangium cellulosum RepID=A9FB16_SORC5 Length = 349 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 122/297 (41%), Gaps = 5/297 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L ++D +L+ A+ + + AA+ + +T ++S ++ +LR F DPL ++ G+ + Sbjct: 41 MRLPSVDTHLVVALHALLQERSVTRAARRVGVTQPSMSHALSRLRAHFGDPLLVQVGRQM 100 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 T + A L ++ +E + +D +R T + T ++ LVLP + R + Sbjct: 101 TLSERARDLLPRAAEAVERLEQVFGQAERFDPRRSTRTFRLVATDNLELLVLPPLTRILA 160 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + LR I D L + + D + + L + +V + R G+P Sbjct: 161 AEAPHVNLRCRNIPPDFAELLRRGELDAKLGRGGPVPDGCRSTQLAAEQLVCLMRRGHPA 220 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 H+++ P ++ + + Q + R++ T + L +++ SD+ Sbjct: 221 SRKALTAARYAACEHLMISPHGEDHNVIDQELAARGLRRRVTLTVSHFLVAPFILSGSDL 280 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 L + +R +R L P P L ++ + + S D + I A Sbjct: 281 LLTVSARVAVALARKLDLVVRPCP-LEARGYTLTLVWPERSEGDEGHSWLRAAIERA 336 >UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=Shewanella RepID=A8H6N4_SHEPA Length = 305 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 73/299 (24%), Positives = 148/299 (49%), Gaps = 6/299 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + ++ DLNL IF AVY AA+ L+LT S++S +I +L++ + LFIR G+G Sbjct: 1 MSQQKSFDLNLFRIFTAVYRTSSFSRAAEELDLTQSSVSNAITRLKLAVGEELFIRVGRG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAI 139 V PTA AM+L++ ++ + I +D +RT + + S L+ ++ + + Sbjct: 61 VKPTASAMNLYQQLASPVSEIEQVASSFELFDAKRSERTFYVYASESAILLLQGIVEQFL 120 Query: 140 KTHYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + L+ R PP+ + + L + DL +D + + + + D +V + R+G+ Sbjct: 121 EELSINLVFREPPLIEEELQMDLQLEKVDLALDIWLPESSSFKSQKVMQDKLVCVARKGH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P +S +E N H++ N S +++ P R+++ +IL++ AL + S Sbjct: 181 PRISGAITQEQYFNEKHIIFKMRRDNLSVADLLTKQVLPARKMHSEQSSILSMMALASKS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 D LAI+ + + +++ + L+ P E I++ + ++ ++ + D++ A Sbjct: 241 DALAIVSKSYTDEYAQLFGLQVFELP-FAAEPIEYYMVWSHKLQQNRANIWLRDLLNQA 298 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 16/309 (5%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L IDLNLL + + + AA L L+ SA+S+S+ KLR F DPLF+R Sbjct: 15 MQIEKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTS 74 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYR 137 G+ T A+ L + + + L + Q + IA SV L++P Sbjct: 75 YGLNATPKALFLKPKLDVLVNQLE-LLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLP 133 Query: 138 AIKTHYPQLLLRNPPISD-AENQLSQFQTDLIIDN----------MFCTNRTVQHHVLFT 186 I H P L + ++ +L + D + + ++ Sbjct: 134 TIFRHGPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYR 193 Query: 187 DNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYN 246 DN + R G+P+L + + + N HV + + + L R+ ++ +R I T + Sbjct: 194 DNQRCVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPD 253 Query: 247 ILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPIL 306 + A+L +D + PS F + ++ L +LP P + + +++ +++ DP L Sbjct: 254 FNSAASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLP-MEFPPMAYTLFWHRERENDPAL 312 Query: 307 HGVIDVIRN 315 + ++I+ Sbjct: 313 RWLRELIQT 321 >UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=Bacteria RepID=A1VMI6_POLNA Length = 333 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 106/281 (37%), Gaps = 6/281 (2%) Query: 41 YVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGL 100 Y + + AA+ L + +S + +LR DPLF+R +G+ PT L + + L Sbjct: 53 YNTRSVTRAAEQLGQSQPTVSIWLARLRRQLGDPLFVRTPEGMLPTPRTDALIATVREVL 112 Query: 101 ESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPIS-DA 156 E + + E +D QR I T + +LP ++ ++ PQ+ L I Sbjct: 113 EGLRRLSESESRFDPATAQRGFRIFMTDASHITLLPRLFSHVRALAPQVRLEAATIDARM 172 Query: 157 ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVL 216 L + DL + + LF + + +C +P + + AH+ Sbjct: 173 APALQSGEGDLALGLVPGLEAGFYQQTLFGQDWICLCNARHPRIGEMFTLQDYAAEAHIG 232 Query: 217 LLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP 276 ++ + L ++ R++ L +AA+++ SD++A +P + Sbjct: 233 IVS-GTGYQLLDGALKSQGIARRVLLELPGFLGLAAILSTSDLVATLPRHIGETLANAAG 291 Query: 277 LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 L LP P +++ D + V F Sbjct: 292 LRVLPCP-FEIPGFTVKQYWHARYHHDAGNRWLRGVCAELF 331 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 6/295 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ++DLNLL +FE+++ + + + L L+ A+S+ + +LR + D LF+R +GV PTA Sbjct: 13 HLDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDELFVRHRRGVEPTA 72 Query: 88 FAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 FA L E +S L + ++ + + R +A + LP + + H PQ Sbjct: 73 FAQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRVALSDIGERYFLPRLAAWLADHAPQ 132 Query: 146 LLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + + S + L+ + DL + + + V LF + V I R +P + Sbjct: 133 VSIDTVSASREELLTGLASGEIDLAVGFLPGLGKQVHEKRLFQEKFVYIARRDHPGIDGR 192 Query: 204 DDRETIDNAAHVLLLPEEQNF-SGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 + HV+ P + + + + + + L+I +VA+SD++A+ Sbjct: 193 LQASQLRALPHVVGSPHGTQHAAAVEKVLTGPRVRAVVAMRVGSFLSIGPIVADSDLVAV 252 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +PS L S L+ + P + + S+ +++ DP + V F Sbjct: 253 VPSNLAALVSEHVGLQLIA-PPVRFPSFEVSMVWHRRFHGDPGGAWLRGVFSQLF 306 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 8/295 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + D NLL + + + AA+ L L+PSA+S+++ +LR DPL +R G+G+ P Sbjct: 1 MSTPDFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L E +SQ ++ L D RT T+ P + + Sbjct: 61 TPRALELREQVSQLVQDAAAVLRPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIARVGEA 120 Query: 143 YPQLLLRNPPISDAENQ-LSQFQTDLIIDNM-FCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + LR P S+ + L DL + T V+ LF D + + R+G+PL Sbjct: 121 APGVRLRFMPKSNKDTAPLRDGSVDLDTGVVGEGTGPEVRVRALFQDRFIGVVRQGHPLC 180 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E HVL+ + + + ++ + +R+I AL +D++ Sbjct: 181 QGEITPARYAAGRHVLVSRRGTDKGPVDETLRAIGLEREIMTIVGGFAPALALARATDLV 240 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 A +P R LPFP+ +I S+ ++ D + +R Sbjct: 241 ATVPERHTGTLRDGMHSFALPFPA---PEITVSLLWHPRMDADLAHRWLRGCVRE 292 >UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobacteria RepID=Q7MC61_VIBVY Length = 313 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 132/296 (44%), Gaps = 8/296 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +DLNLL F+ V + + AA+ L +T A+S ++ +LR + DPLFIR+G+G+TPT Sbjct: 14 TMDLNLLKTFDVVMKTRSVNEAAETLGITAPAVSHALNRLRDQYQDPLFIRQGRGITPTN 73 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 FA+ LH I + L +L ++ RT +++ + ++LP + + H P Sbjct: 74 FAIELHAEIQEPLSLLLNGAKSRQQFNPDTSHRTFRLSSHKDIDLMLLPPLMDHLAQHAP 133 Query: 145 QLLL----RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 + L + D + L + D+I+ + + +LF +V++CR+ +P + Sbjct: 134 NVKLCADVEHLDERDRQADLRTRKVDMILATVPFDEHGYHNELLFELPLVMVCRQDHPRI 193 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + H+L + QN + E P R I + + + + A +D + Sbjct: 194 QNTITHQQFFAEQHLLWETKRQNQDIVDSLALEPQPQRNIAYKTGSSCNAIMMAAQTDWI 253 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + +L ++ L+ +P P ++ + ++ +D + + A Sbjct: 254 CVTGQWHADLMAKAHQLQVMPLP-FKLNKLPIYMTWHHSQQQDSGHQWLKSALMQA 308 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 7/294 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNL T+FEA+Y+ + AA+ LNLT AIS ++ +LR DPLF+R+G + PT Sbjct: 2 KIDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTP 61 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 A L I L + GAL ++ ++T +A + A +LP + + + P Sbjct: 62 LAQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGLDNIAP 121 Query: 145 QLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + L + I D E++L+ + D ++D + T+ + L D +V+I L Sbjct: 122 NIQLASVHIERRDMESKLASGELDFVVDVLLPTSEQIYKKKLLNDELVVIYNPALSQLPE 181 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 E A H+L+ S + + +R + + + +++ ML Sbjct: 182 GFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYYAACQVASDNGMLLT 241 Query: 263 IPSRFYNLFSRCWP-LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +PSR+ ++ + +P L++ P ID +++++ D D+++ Sbjct: 242 MPSRYASILLQHFPTLQRSSLP-FKTSSIDVYLYWHESLNEDGANAWFRDMLQQ 294 >UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJR3_SORC5 Length = 306 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 136/298 (45%), Gaps = 5/298 (1%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR +DLNLLT+ +AV + + AA+ L +T A+S ++ +LR++F D L +R+G+ Sbjct: 6 LPRLRAVDLNLLTVLDAVLTERNVTRAAERLGMTQPAVSSALNRLRLLFNDDLIVRRGKE 65 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYD--KQRTITIATTPSVGALVLPVIYRAIK 140 + PT A+ L I + L+ I +L G++D RT + T AL+LP + ++ Sbjct: 66 MAPTPRALALAGPIRKALDLIQASLAHTGAFDCTASRTFRLGITDIGEALLLPRFLQWLE 125 Query: 141 THYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 ++ L P + +N++ + +L++D++ + + V + R+ +P Sbjct: 126 QLGARVRLDFCREPGTSLQNEMRLGKIELVLDHIAIPGEEFRRTRVLDLEFVTLVRQDHP 185 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + HV++ P E + Q + R + L++ +V+ S+ Sbjct: 186 TVGPSLTLDEYMALEHVIIEPREGQTNLAEQIQAAVGRARCVRVQVPRYLSMPFIVSQSN 245 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 ++ +P LF + +P+ + P L + I + ++ DP + + Sbjct: 246 LVCTLPLPLARLFEQHFPVRVVSCP-LPIQPIPLFMMWHACQDGDPAHEWLRRSLIEL 302 >UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=Gammaproteobacteria RepID=A8H3B3_SHEPA Length = 304 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 142/294 (48%), Gaps = 5/294 (1%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + D NLL IF VY + I AA L LT +S ++++L+ LF+R+G+G++PT Sbjct: 7 KRFDFNLLVIFLEVYQLRSITLAADSLGLTQPGVSAALKRLQATLGVELFVREGRGISPT 66 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD--KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A+ L +S ++ AL +D R+ + + L+ P+ + Sbjct: 67 NAAIQLASQVSPAYNTVNSALSNVAGFDKQTPRSFLVYVDEPMMNLLQPLAEQDSDMGNC 126 Query: 145 QLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 +++ + PPI + QLS + DL ID + + + + + +++ +ICR+G+P ++ Sbjct: 127 EIMFQLPPIEEERLLQQLSLQKADLAIDVGQLPSLSYSNQLFYRESVTMICRKGHPRING 186 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 + + H+ L + L +E+ +R+++ +++L++ ALV+ SD +AI Sbjct: 187 KIGKIQFYQEKHITLQIRRATLTALDFFTEEVIGERKVSCECHSLLSMMALVSESDCIAI 246 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + ++ + L+ + P N + + ++ ++K + +P + + + Sbjct: 247 TSRSIADKYADKFGLQSIE-PPFNTKPVLHNMMWHKRNEFNPAHTWLREKLNQL 299 >UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=B0TPA4_SHEHH Length = 301 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 137/296 (46%), Gaps = 6/296 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 T + D+NLL +F AV AA+ L+LT ++S +I + + + + LF+R G+ Sbjct: 1 MTQQKQFDVNLLRVFLAVCRTGSYTLAAEELDLTQPSVSNAINRFKAVVGEELFVRAGRN 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI 139 + PTA A +L E ++ +I ++ +D R + + ++ + + Sbjct: 61 IKPTAMANYLFEQLNDSFCNIEQTINGLEGFDPNTSERQFVVLANDVIAHMLQRRLDELV 120 Query: 140 KTHYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 K +++ R PP D+E L+ Q DL+ID + + +L + V + + + Sbjct: 121 KDLPIEIIFREPPDFDSEILELLTLEQADLVIDIGLPEDNRFERKLLIQEAAVCVASKEH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P + E HV + N + + +E+ P+R++ + ++L++ + V+ S Sbjct: 181 PRIQESISWEQFFAERHVFVKLRRFNRTAVDILSEEVLPNRKVYSSKSSMLSLFSAVSTS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 D + + P + N F + + L+ LP P N + +D + + K R+P + + I Sbjct: 241 DAIGVAPRNYSNDFEKVFNLQLLPLP-FNTKPLDIELVWKKKHNRNPAHIWLREQI 295 >UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q393U0_BURS3 Length = 310 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 129/299 (43%), Gaps = 9/299 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLL +A+ K + AA + L+ SA+S ++ +LR++ D L IR G+ Sbjct: 1 MNLRSVDLNLLVALDALLTEKHVTRAATKVGLSQSAMSSALGRLRILMRDELLIRNATGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIK 140 PT A+ L E + Q L L+ +G++D T + + + L++P + ++ Sbjct: 61 EPTPRALELEEPLRQLLHQAERLLESDGAFDPATTAGHFRLRMSDVLEYLLMPPLLAQLE 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + L +S L D+ + VQ LF D MV + +P Sbjct: 121 QEAPGVTLDVVHLSPGQTVTALEADDIDVAVSMDLEHAGAVQAMPLFDDRMVCVMARDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + + H+ + + + ++ M R + + L + L+ +S Sbjct: 181 CAAEALTLDLFLSLPHLKVSISSTDGRYVDAKLAGMRRARNVVLNVPHWLVVPHLLRHSS 240 Query: 259 MLAIIPSRFYNLF-SRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 M+A++ +R F + L+ LPF +S+++++ P + + IR A Sbjct: 241 MVAVMSARLAERFAADGLVLKALPF---ESAGFHWSMYWHRRHDSVPAQAWLREKIREA 296 >UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W028_MARMS Length = 309 Score = 243 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 131/299 (43%), Gaps = 7/299 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL + + + I A+ LN++PSA+S S+ +LR F D L + G+ + Sbjct: 1 MRFKKLDLNLLVALDTLLTEQSITKGAEKLNMSPSALSNSLSRLRDYFEDDLLTQIGRRM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 T +L + L +I + ++ S++ Q R +I + +++P + Sbjct: 61 VITPLGENLKVSVRNALNNIESTILVQPSFEPQTTDRIFSIFCSDYTQTVLVPHALEIVG 120 Query: 141 THYPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + ++ QL Q + DL+I + +L+ + V + + + Sbjct: 121 KQKSTARFQLLAQVANNPHEQLEQGKADLLIIPSDFMSTEHPCDILYEEEFVCVVWKHSK 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGL-RQRVQEMFPDRQINFTSYNILTIAALVANS 257 + S E E A HVL+ PE Q+ R + T+++ ++ ALV S Sbjct: 181 IASGELTAEKYAAAGHVLMRPEATKKDFFGTLFTQKYGIKRHVIATTFSFASLPALVIGS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + +A I +R ++ WPL+ LP P + + + ++++ D L + + ++ A Sbjct: 241 ENIATIHARLATKMAKVWPLKILPLP-FDIPPMKQCVQWHQYRNNDEGLIWLRNTLKEA 298 >UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomonas sp. A4 RepID=Q1MWN1_9SPHN Length = 302 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 71/300 (23%), Positives = 139/300 (46%), Gaps = 6/300 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +R++DLNLL +FE V+ + +V AA++L ++ A+S +++KLR + D LF+R G Sbjct: 1 MVKIRDVDLNLLRVFECVFQTRKVVEAAEILGISQPAVSNALKKLRELLNDELFVRTRSG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI 139 + PT +AM L E IS L+++ A++ S+D + R IAT+ P + I Sbjct: 61 MIPTQYAMQLAEPISYALKTLEIAIEASESFDPRRDKRHFVIATSDLGDMYFGPKLISHI 120 Query: 140 KTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + + + S L + D+++ + LF ++ R+ + Sbjct: 121 RDISQDITIEFVGNSRPHIFESLENGEVDILLGFRPDLITNMFVFRLFYQGWRILARKDH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P+ S + RE + + + E + + + ++ DR I + N T+A L+A Sbjct: 181 PIFSSKAPREDLLACRWIGVRSEGSGSASVNAELLKVGMDRNIVVWTSNFGTLAPLLAVG 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 D+ A +P + + + L+ +PFP ++ + S ++ + DP + + F Sbjct: 241 DLAACVPEIYTTVIDEAFGLKSMPFP-VDLPKHSISSVWHSKAHNDPANQWLRQQVSILF 299 >UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUQ0_9GAMM Length = 300 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 128/294 (43%), Gaps = 6/294 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LR++DLNL +FEA+ + AA L ++ A S ++++LR+ D LF+R +G+ Sbjct: 4 NLRSVDLNLFPVFEAIMEQGSLNMAACHLGMSQPAASAALKRLRLTIKDELFVRTRRGLE 63 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PTA A+ L+ + LES+ G ++ +D +R +A + + + ++ Sbjct: 64 PTARALELYPVVHHLLESLRGEMERANQFDPLFCERIFKVAGGDYFDMVFMGRLMNMLRE 123 Query: 142 HYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P++ + + ++ N + + + DL + + LF ++M ++ +P Sbjct: 124 SAPKVQVESVIHGFQESLNLIQRGKLDLCLHYDKEIAHELPTLKLFEESMSVLMAADHPY 183 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + HV+L N + L + +R + ++ ++ + S + Sbjct: 184 ADKQLSLSDYIALEHVVLPKLSGNANQLDVILGGFNENRCVRARVSSVSSMVMAIKQSYL 243 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + IP+R ++ + L PFP I + + FS +D + ++I Sbjct: 244 IGTIPTRMASILCEGYDLVFKPFPK-EAPPIPIYLSWAPFSDKDSVHRWFRNMI 296 >UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP1_SORC5 Length = 312 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 126/297 (42%), Gaps = 8/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L ID+NL+ +A+ + + AA+ + L+ A+S ++ +LR +F DPL IR G+ + Sbjct: 1 MNLSAIDVNLVIALDALLQERSVTLAARRVGLSQPAMSHALTRLRELFSDPLLIRVGRQM 60 Query: 84 TPTAFAMHLHEYISQGLESILGAL-DIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 T+ A + ++ + + G + ++D R IA T V +++P + A+ Sbjct: 61 ALTSRAEAMTPQVTAIVHDLAGLFGETTPTFDPATSDRAFRIAATEYVELVLMPRLNAAL 120 Query: 140 KTHYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMF--CTNRTVQHHVLFTDNMVLICREG 196 P+L L P+ A + L + DL I ++ LF D + R Sbjct: 121 AQGGPRLALHLLPLDGRAVDALRSGEIDLAIGVFPQESLPPDLRRAPLFDDRFAGLARMS 180 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +P + D +T HV++ + + R T ++L + + Sbjct: 181 HPTARGQVDLQTYAALPHVVVPRRGAHDGVADDLIAARGIARHEAMTVPHVLLVPHAITA 240 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 SD++A + +R FS PL P I+ ++ +N + RDP + V+ Sbjct: 241 SDLVATVATRLGRAFSSLVPLRTFDLP-FELPPIEIAMAWNSRTERDPARAWLRGVV 296 >UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C5CVL6_VARPS Length = 327 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 124/297 (41%), Gaps = 8/297 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 IDL+L+ + V + + AA L + A+S ++++LR + DPL +R G G+ P Sbjct: 7 FDKIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGSGMVP 66 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T + + E + L + ++ Q T IA + + L LP++ +K Sbjct: 67 TDAGLRMIEPAASILRAAEMLFSDARGFEPQSAATTFRIAASDYMDPLFLPMLVAHVKRE 126 Query: 143 YPQLLLRN---PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + P SD L+ Q DL+I N + LF D +V + + +P Sbjct: 127 APLCQIEIHALTPDSDYHGHLALGQVDLVIGNWLKPPEDLHMARLFGDEVVSLVNQDHPA 186 Query: 200 LSLEDDRETIDNAAHVLLLP-EEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + D ET A H+ P + Q + E+ R I + I +VA+S Sbjct: 187 VRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFSLIPDMVASSL 246 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++ ++ F+ P++ L P + ++ + +++ + + + I++ Sbjct: 247 LVLTTGRQYCERFAARLPVKILECP-VALPRLMYYQLWHERTHSSSSARWLRECIKD 302 >UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q1LD16_RALME Length = 315 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 123/300 (41%), Gaps = 12/300 (4%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR--KGQG 82 + +DLNLL +A+ + + + A+ L LT A+S + +LR IF DPL I G+G Sbjct: 11 DFKGVDLNLLVTLDALLDERNVTHTAERLGLTQPAVSAQLARLRRIFDDPLLIPADTGRG 70 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI 139 + +A A+ L E + L+ + + +D R IA + + + + + + Sbjct: 71 MIASARALALLEPLHVALKDLESVVHRRPEFDPFVDTRQFVIAASDNATSTLGMSLLERL 130 Query: 140 KTHY---PQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 ++ + ++ QL + DL+I + T++ L + V+ R+ Sbjct: 131 SIVAGTGVRVAFVHGRQAEIAAQLESGEVDLLIGSERMVPPTMRARKLLDETFVMAQRKS 190 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQN-FSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +P + + HVL+ + F + +++Q + R + + + L+ Sbjct: 191 HPRGARRLTLDMYCKLRHVLVSTSGGSFFGFVDEQLQLLGRSRDVAVSVQAFTVVPDLLR 250 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 SD + +P+R ++ LPF + S ++ + DP + + + Sbjct: 251 RSDYVCTMPARLAARYADWLDAFALPF---DVPGFSLSAAWHPRNHADPAIAWLRSTLAE 307 >UniRef50_A7JRS0 Possible LysR family transcriptional regulator n=3 Tax=Mannheimia haemolytica RepID=A7JRS0_PASHA Length = 302 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 123/297 (41%), Gaps = 9/297 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + +R +D NLL F + + AA+ L++T A+S + +LR F DPLF+R G Sbjct: 1 MSDIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNRLRESFNDPLFVRVQHG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIK 140 + PT A+ L + L+ I L T+ IA V ++ + ++ Sbjct: 61 MQPTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIAAMDYVQQIIALPLILRLR 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + P+ + + Q + DL + + + VL+ + V + +P Sbjct: 121 RLAPNVKVALLPVQGQNIKTLFEQKKIDLALVSRQHLSTDTLKTVLYEERYVCAMSKTHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGL-RQRVQEMFPDRQINFTSYNILTIAALVANS 257 + + N +L FSG +Q++ R++ + +I + L+ S Sbjct: 181 MAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIGLQRKVMVSVNHISLLPQLLQGS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 D++A++P R + L P + E + +++ + +D + +V++ Sbjct: 241 DLVAVLPERLAKTLPNVY----LQPPPIEVEGFTMMMAWHERTEQDTAHRWLREVLQ 293 >UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Burkholderiaceae RepID=Q46T42_RALEJ Length = 330 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 7/295 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 D NLLT+F+A+ + + AA L LT SA+S ++ +LR F DPLF++ G+TPT Sbjct: 6 FDYNLLTVFDAMLRERSVTRAAAQLGLTQSAMSHALNRLREFFDDPLFVKTAAGMTPTIK 65 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L E + + ++ + + S+D QRT T+ T + LP + + ++ P Sbjct: 66 AEALSETVLDVMTAMRTRVLPQASFDPATMQRTFTLCMTDMGELVFLPPLMKRLRVVAPH 125 Query: 146 LLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 LR P+ E L+ DL++ ++ ++ LF V I N + Sbjct: 126 CKLRTLQVPVPQIEGLLASGDADLLLGSVQTAPESLFRQQLFMHGFVTIVSTKNRQVRDA 185 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS-DMLAI 262 E ++ HV + + + R I + + L+I L+ +++A Sbjct: 186 LTIEQFESMPHVTVSLAGRTSPSYDAAFESHGLRRNIYLHTPHFLSIPLLMEQQPELIAT 245 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +P N+FSR + + ++ P + S +++ DP + + +++ F Sbjct: 246 VPQELANVFSR-YGIVRVVKPPVVLPPYALSQYWHPRFHHDPAIVWLRQLVKQTF 299 >UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B1S8_9BURK Length = 319 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 134/311 (43%), Gaps = 9/311 (2%) Query: 12 SRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIF 71 SR + T++ ++DLNLL +F+A+ + + A + L L+ A+S S+ +LR +F Sbjct: 3 SRINLTNSGGCMTSVDHLDLNLLRVFQAIVEERSLTKAGERLALSQPAVSYSLGRLRTLF 62 Query: 72 PDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVG 128 DPLF+R G+ PT A+ L + + L+ + AL +D RT ++ + + Sbjct: 63 DDPLFVRTRAGMQPTPVALELAGIVGKALDMVRVALRYAERFDPATSTRTFRLSLSDAGE 122 Query: 129 ALVLPVIYRAIKTHYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFT 186 LP I RA++ P++ L P+ E L + D I N+ +H +LF Sbjct: 123 MAYLPAICRALRERAPRVTLSVQPMPVEAIEEALRASRLDFAIGNLPELMPRTRHQLLFE 182 Query: 187 DNMVLIC--REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTS 244 + V + R G P E AAHV + E + L ++ R + Sbjct: 183 ETYVCMTGRRRGLP-SGTTLTLEQFVRAAHVNVKSVEHSHHALDDALRAQGVGRNVALEV 241 Query: 245 YNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 + + + ++ +D+ A +P R + +R + ++H+++ D Sbjct: 242 PHFVALPGVLQVTDLYATLPKRLAQILNRDNAFRLYAL-PVPLPPAPVTMHWHEHFHEDE 300 Query: 305 ILHGVIDVIRN 315 + + ++ Sbjct: 301 GITWMRALLAE 311 >UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q1R0T8_CHRSD Length = 308 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 123/296 (41%), Gaps = 7/296 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +R IDLNL+ F +Y + AA LN+T ++S S+ +LR +F DPLF R G+ P Sbjct: 1 MRPIDLNLVRTFVTLYESGSVTLAAHKLNVTQPSVSYSLSRLRELFDDPLFSRTRDGMAP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T AM L+ Q L I L +D QR +A T +L I R ++ Sbjct: 61 TFCAMRLYTSFRQALTQIEQTLSDAQHFDPEQSQRRFRLALTDLGETTLLAPILRHMRDL 120 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L P+ + D +I + ++ + + V + +P + Sbjct: 121 APGVELEVVPLEIDKVVSWFDNKSVDAVICSRDIQAPSLGRRPIIEERYVGLLGRRHPRI 180 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E HV + P + ++E R+++ + + L+ ++ +L Sbjct: 181 GQTLSMEAFSREDHVQVSPT-TGHGLVEDVLKERDITRKVSVVVPHFSALPRLLESTSLL 239 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 AI+P + LF++ L+++ P + ++ ++++++ + A Sbjct: 240 AILPEQIAGLFTQQADLKQVELP-FDIPPVEVALYWSRQVDDSAAQEWFRRTLIEA 294 >UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X639_OCHA4 Length = 324 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 129/319 (40%), Gaps = 26/319 (8%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +++ NIDLNL+ +F A+ + + A + LNLT SA+S ++ KLR I D LF+R QG Sbjct: 1 MSSIHNIDLNLIRVFNALMEERNVTKAGERLNLTQSAVSHALGKLRYILSDELFVRGPQG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRAIK 140 + PT A L + + L I AL + +AT+ + P + ++ Sbjct: 61 MHPTPRAEELSQPLRSALADISAALSPVQFDPATADMSFVVATSDFYIGTLFPAVMERLE 120 Query: 141 THYPQLL--LRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + LR + +L + L++ + L + + V I R+ +P Sbjct: 121 KEAPGIRLWLRLFNDLNLVEELDRGTLHLVVGAFGRIPSRFRRETLVSVDNVWIMRKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQ---------------------NFSGLRQRVQEMFPD 237 S ET+ + H+ +L + N L ++E+ Sbjct: 181 ASSGPLTIETLGHYPHIDVLLSGRAAMEAAGMQEQEGLERAFVTSNPPFLEGLLREVGLS 240 Query: 238 RQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYN 297 R+I T IL + LVA ++M+A++P + + L P ++ + Sbjct: 241 RRIGATVSLILAVPPLVAATNMIALLPRSVAETYKDTYGLVLHEAPY-PLPATQINMLSH 299 Query: 298 KFSLRDPILHGVIDVIRNA 316 P + + V+R A Sbjct: 300 NTFGAHPAVAWLRSVLREA 318 >UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q210Z5_RHOPB Length = 301 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 116/291 (39%), Gaps = 6/291 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL +A+ + AA +NL+P A+S+ + ++R + DP+ +R G+G+ T Sbjct: 10 LDLNLLVTLDALLSEGSVAGAANRMNLSPPAMSRQLARIRHLMNDPVLVRAGRGLVATPR 69 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A + + Q ++ G + D +RT TI ++ I + P Sbjct: 70 AEAVRAQVRQLVQDAEGLVRGNADLDPATIERTFTIRSSDGFVGTFGAAIVELVVQQAPN 129 Query: 146 LLLRNP-PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 LR ++ + L + DL I + ++ LF D + + R +PL Sbjct: 130 ARLRFVGEGNEDVDSLRDGRVDLDIGVIDGMGPEIRLQTLFRDRYIGVVRADHPLAQETV 189 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 E HV + + + + R ++ N+ ++V+ SD + ++P Sbjct: 190 TIENFVAYPHVSVSRRGRFEGPVDTALALQGMRRTVSVAVANVADGLSIVSRSDHIVLLP 249 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 R + R + P + +E SI ++ +D + +R Sbjct: 250 GRIAAWYRRDF--HGFELPVVTDELPPISIAWHPRFEKDAAHRWLRTCVRE 298 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 8/295 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + DLNLL + + + AA+ L L+PSA+S+++ +LR DPL +R G+G+ P Sbjct: 1 MSTADLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT---IATTPSVGALVLPVIYRAIKTH 142 T A+ L E + +++ AL D +R + + T+ P + + Sbjct: 61 TPRALELREQVGPLVQAAEAALRPVEKLDLERLVRMYTLRTSEGFVENFGPDLIARVAEQ 120 Query: 143 YPQLLLRNPPISDAENQ-LSQFQTDLIIDNMF-CTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L S+ + L DL + T ++ LF D + + R G+PL Sbjct: 121 APGVRLCFVQKSNKNSAPLRDGSVDLETGVVGKATAPELRVQALFRDRFIGVVRMGHPLS 180 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E H+L+ + + + ++ + +RQI T L SD++ Sbjct: 181 QGEMTPHRYATGKHILVSRRGFDRGMIDEALKPLGLERQIVTIVSGFSTALVLARASDLI 240 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 A +P R + P P + +I S+H++ DP + +R Sbjct: 241 ASVPERHTAKL--RAGMHSFPLP-IATPEITVSLHWHPRMDADPAHRWLRGCVRE 292 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 128/299 (42%), Gaps = 8/299 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 R +DLNLL F +Y + + AA L+L A+S ++ +LR +F DPLFIR GQ + Sbjct: 3 NDFRGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQVM 62 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PTA A +L +S E + L S+D R IT+ T V ++P++ + +K Sbjct: 63 RPTARADYLATQLSPAFEQLQSVLGEPESFDPLTDSRAITLGMTDWVEIWLMPLLLKRLK 122 Query: 141 THYPQLLLRNP---PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + P L + P D E L DL+I ++ L + + Sbjct: 123 ANAPHLRINLVATDPFLDVER-LENDSVDLVISVASPQAGWLKQRALLSSGFRALWHPQQ 181 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 L E H+L+ E+ + +++ R I +T+ + + ++ ++ Sbjct: 182 LALPSPVPLEVYSQQRHLLVTYRERAHGIVDDMLEKQGMTRTIYYTTPHFSALPGILQHT 241 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +A +P + L+ + + L P P L+ S ++ +P + + + I A Sbjct: 242 PSVATVPEKLATLWCQHYGLNDSPVP-LDLPTYTLSALWHARQDSNPAIAWLYEQIAEA 299 >UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q471I4_RALEJ Length = 323 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 128/298 (42%), Gaps = 8/298 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + LN L + + + + + AA+VLNLT A+S+++ +LR F DPLF+R G + PT Sbjct: 10 DELSLNQLLVLDVLLSERSLTKAARVLNLTQPALSKTLARLRQYFGDPLFVRVGLRMEPT 69 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHY 143 A+ L + + L+S+ +D QR+ + + + +LP + + Sbjct: 70 PKALELADPVRGILQSVRALRSDHVGFDPRTSQRSFSFFLLDAGASQMLPPLLSRLAEEA 129 Query: 144 PQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P +L++ N + + L DL I + ++++ +L+ + + R+ +P L+ Sbjct: 130 PGILVQAVNADATHLDIWLENGLVDLAIGSFPGLTQSIRRQLLWHETYGAVVRKDHPRLA 189 Query: 202 LEDDRETIDNAAHVLLLP--EEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 D + HVL+ + + ++ P I + T + +SD Sbjct: 190 QLGDLDAFVAEKHVLVSAVGTGHQHLSIERAIEAAVPHTNIICRVPSFATAGLIAKHSDA 249 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +A++P + L + P L +D + H++ R+P + ++ F Sbjct: 250 VAVLPLTLARALCKDLDLTVV-MPPLTLPGMDIAQHWHDRVHREPGNQWIRALVHRLF 306 >UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8Q8_MARAV Length = 312 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 11/296 (3%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 N DLNLL F A+Y+ + + A + L+L+ ++S ++ +LR +F DPLFIR Q + PT Sbjct: 4 NYDLNLLRTFHALYLEQNVTRAGERLHLSQPSVSAALGRLRELFKDPLFIRDRQRMRPTE 63 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 A HL I L + G + E + QR IA L+LP + ++ P Sbjct: 64 TADHLFPVIEAALTDLDGLITSERDFSPATEQRHFEIAANDYFEVLILPALASVLREQAP 123 Query: 145 QLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL-- 200 + L+ +S +E + TDL + + + + + +PLL Sbjct: 124 GITLQVRRLSQDMSEAGIMSGTTDLAFGRQVDPPDNLVVREVILEGIECLVGNEHPLLER 183 Query: 201 ---SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + + R+ + AHVL+ P + SG+ ++++ R++ + + AL+ S Sbjct: 184 LKGNGQMTRDDFERYAHVLIQPHTRLKSGIFKQLESQNLKRKVALAVTYFMAVPALLEGS 243 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 ++A +P+ F R + + + P + + F + ++ +DP + + I Sbjct: 244 SLIASLPTGLCQHFRRQFAVTPVA-PPVAFDAFPFHLSWHHRYQKDPAHRWLREQI 298 >UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter RepID=D0RY94_ACICA Length = 311 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 127/299 (42%), Gaps = 8/299 (2%) Query: 17 EGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLF 76 +L IDLNL +F +Y K + A++ L L+ A+S ++ +LR F DPLF Sbjct: 2 NEMNNNVASLARIDLNLFRVFVTIYKEKNLTRASEQLFLSQPAVSHALARLRDHFNDPLF 61 Query: 77 IRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLP 133 IR G GV P+ A L I Q L+ + A+ + R +TIA + LP Sbjct: 62 IRDGHGVVPSPLAKRLWPKIEQSLQLMHQAIQSTYDFVPARDLKHLTIAMNDEYEGIFLP 121 Query: 134 VIYRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVL 191 I + + P L L + I + ++LS + D ID ++ + D V+ Sbjct: 122 SIIQHLTQFNPNLQLNSVRIDRKNLRHELSTGKIDFAIDVQHSVEDSIGYECCTKDQFVV 181 Query: 192 ICREGNPLLSLED-DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTI 250 I R+ +PLLS D +E +A H+ + + + R I+F T Sbjct: 182 ISRKQHPLLSSTDLTKEIYLDAKHITVSSRPTGRVFEDFFLSKQGIKRTISFRCQQYETA 241 Query: 251 AALVANSDMLAIIPSRFYNLFSRCWP-LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHG 308 L+ +D L IP F +P ++ P P ++ ++++++ + + Sbjct: 242 IRLITQTDHLLTIPQCQIAYFKDNYPQIKVHPLP-IDIAGYQMNLYWDQQKSHEHQIVW 299 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 132/292 (45%), Gaps = 7/292 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 IDLNL I AVY I A K L+L+ A+S ++ +LR + DPLF+R G+ + T Sbjct: 6 SKIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHGRKMIAT 65 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 + + + + L G +D QR + + ++ P + + + Sbjct: 66 QLCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGFRDILESIFFPELATDLMANT 125 Query: 144 PQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + + + +S D E L D++ID + T+ + H ++ ++ LICR+G+P+LS Sbjct: 126 PNITVHSRQVSRLDMEAALESQALDIVIDVLTPTSNDIHHTLICDEHFSLICRKGHPILS 185 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + A H L+ ++ + + + + R+ + ++++ DML Sbjct: 186 -DMSLANYIKAEHALVTFKDSAVNTVDMALAKHAVARKFALKCEHYFAATSVISRCDMLL 244 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +P+ + L + P+E +P P + ++++K + DP+ + + Sbjct: 245 TMPNAYARLLKQQMPVEVVPLP-FEVPILPVHMYWHKQAEHDPLNSWMRQKL 295 >UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6V8B0_PSEA7 Length = 310 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 9/304 (2%) Query: 18 GKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFI 77 +P + L +DLNL +FE VY + + AA +L+L+ SA+S ++ +LR DPLF+ Sbjct: 2 NQPHEWPPLSRLDLNLFRVFEVVYRERNLTRAAALLHLSQSAVSHALARLREQLGDPLFV 61 Query: 78 RKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPV 134 R+G+GV PT A L I L + ++ S+D + RT + + LVLP Sbjct: 62 RQGRGVAPTPLAERLAPGIRDALAGLQRSVARCQSFDPRHDARTFLLNMPEQLEPLVLPD 121 Query: 135 IYRAIKTHYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLI 192 ++ PQ+ +R + ++ + +L + D ++ T+ ++ L D + ++ Sbjct: 122 FLGHLRQVAPQVEVRCSSLHWAELKTELEAGRIDAAVEVARPTDAALRRQPLLEDRLWVM 181 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 P + E E AAHV + + + ++ R++ + L+ A Sbjct: 182 A---GPEFAGELSAERYLAAAHVAVTSRRRGICIEDLALGQLGLTRKVRQRCQHYLSAAL 238 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 LVA L + R+ L +R LP P L + ++++++ + +P + Sbjct: 239 LVAQGGYLLTLTRRYAELLNRGLGNRLLPMP-LALPAVALNLYWSRQADAEPGGRWLRGE 297 Query: 313 IRNA 316 + Sbjct: 298 LMEL 301 >UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAM0_9RHOB Length = 312 Score = 240 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 121/297 (40%), Gaps = 6/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL + + K + AA+ L L+ SA S ++ +LR F D L ++ G+ + Sbjct: 3 MRFKGLDLNLLVALDVLLREKNVSRAAEKLFLSQSATSGALARLREYFNDDLLVQVGRQM 62 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 T A L + L I G + +D R + I ++ + VL R I Sbjct: 63 VLTPRATALSGKVRSALVQIDGTIIQSPEFDPSTAVRILRIISSDFITISVLREAVREIG 122 Query: 141 THYPQLLLRN-PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P L + P + ++ + + DL++ + FTD+ V+I GN Sbjct: 123 KSAPGLTIDIQQPANKPHEKIERGEVDLLLMPELYISPDHPSEQFFTDDYVVIAWSGNTQ 182 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEM-FPDRQINFTSYNILTIAALVANSD 258 + A H ++ E S +Q +R I + + ++ +D Sbjct: 183 FGDTITEDQFFAARHATVMFESHTPSYEAWFIQNKDGRERDIAIVVGSFSALPFMIEGTD 242 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 LA++ ++F+R PL L P ++ + SI ++ +S D L V + I Sbjct: 243 YLALMHRSMADIFARQMPLRLLRCP-IDIPPLVESIQWHTYSDGDECLAWVREKIHE 298 >UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UEX0_YERRU Length = 299 Score = 240 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 121/300 (40%), Gaps = 8/300 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +LR IDLNLL I + + + + AAK L ++ A+S ++ +LR + D L +R G Sbjct: 1 MNSLRAIDLNLLVILDVLLSERHVSRAAKRLYMSQPAVSHALNRLRYLLDDELLVRVAGG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 T A L E + + LE + + G+++ + IA + A+VLP + + + Sbjct: 61 FQLTRRAAALIEPLKEVLEKVRYII-GTGNFEPALATQRFRIALSDYGAAMVLPGLLQRL 119 Query: 140 KTHYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + P + L Q+ Q DL + + LF ++ V + + N Sbjct: 120 RQQAPGIDLVVEQASREQMIEQVMAGQLDLALGVFPDLPADMTASRLFEEHFVCVIDQAN 179 Query: 198 PLLSLE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 PL + + H+L+ ++ + + E+ R++ + L +A Sbjct: 180 PLARKKYFTLDDYLVQPHLLVSMRGESVGEVETALAELGVRRRVAAIMPHFLLAPQALAG 239 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +D+L + SR + L++L P DF ++ + + + + Sbjct: 240 TDLLLTVASRVVTIQQESMNLQRLTLP-FTVPNFDFVQIWHNRNHGKEDHRWLRQQVAES 298 >UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZY6_VARPS Length = 325 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 9/293 (3%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +D++LL + A+ + + AA +N T AIS ++++LR F DP+ +R+ G+ PTA Sbjct: 8 VDIHLLRVLAALVAERSVSRAAVRMNQTQPAISAALRRLRDAFGDPILVRERGGMVPTAR 67 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ L E + L I L ++ T TIAT + A + + + PQ Sbjct: 68 ALQLRESAREVLGEIDRMLAGPERFEPGASTMTFTIATPDYLAASFMAEVVARFRAEAPQ 127 Query: 146 LLLRNPPIS---DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS- 201 L P++ D E L+Q + D++I N + +L D +V + GNPL + Sbjct: 128 ARLLIHPLTPGYDYERALAQGELDIVIGNWPLPPERMHLSLLIEDELVCMMSPGNPLAAP 187 Query: 202 LEDDRETIDNAAHVLLLP-EEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + AAHV+ P + + + + + + R LVA SD++ Sbjct: 188 GAMTLQRYLAAAHVVPTPFAKSHRAVVDSHLAGLRQTRDARVFVPYYAMAPYLVAESDLV 247 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 F F+R P+ + P ++ F +++ S + ++ Sbjct: 248 FTTARHFAEQFTRSLPVVSVAAPE-GFPRMRFYQLWHERSQHQGAHRWLRSLL 299 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 119/297 (40%), Gaps = 6/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL +F+A+ + + AA+ + LT A S ++++LR F D + + G+ + Sbjct: 1 MRFKGLDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT FA LH I Q L + A+ + +D R I + + VL + Sbjct: 61 HPTPFAEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFA 120 Query: 141 THYPQLLLRNP-PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + + P + +L + DL++ VLF + V++ NP+ Sbjct: 121 RTAPGVRIEIIQPNEHSVAELEAGRADLLVTPEPFLASWHPSEVLFDEEQVVVGWAQNPI 180 Query: 200 LSLEDDRETIDNAAHVLLLPE-EQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + A HV + + + + M +R++ T + + + + Sbjct: 181 FARGVTADDFYAAGHVTVAFGANRTPAFADSALSRMGRERRVEVTVGSFASAPWFIEGTS 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 LA++ R +R + L P + + + +++ D L + +R Sbjct: 241 RLAVLHERLVRQIARRFNLAWARMP-FDFPTMQEMMQFHEARAEDAGLAWLRQQMRE 296 >UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS61_DESAD Length = 310 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 6/294 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 N+DLNLL I + ++ + + A L +T SA+S ++ KLR F D LF+R+G + PT Sbjct: 7 SNLDLNLLVILDTIFTERSLTLAGNKLFMTQSAVSHALSKLRHHFDDRLFVRRGNIMEPT 66 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHY 143 +H+ I+ L++I +L G +D +RT ++ + + L+LP I R I + Sbjct: 67 PLCKTIHQNIAPSLKAINQSLADRGEFDPASSKRTFSLGLSDYLCKLLLPEILRLIDSRA 126 Query: 144 PQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 + +R E L + D+ + V LF D V + R +P+ Sbjct: 127 LGISIRIMQTTYEKREEMLQSGKLDVFLGCPRNYGAGVLKEKLFEDREVCVVRNDHPIKG 186 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + E + L E L + R+I I +LV NS+++ Sbjct: 187 EVMNEEEMAENEFAALSLSESGLGFLEDYLYRKGVQRKIKIVLQQETVIPSLVENSNLVG 246 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 I R +++ L + P N E + S H++ + DP + VI+ Sbjct: 247 SIAQRLAEMYAAKGRLRIVHMPLENTE-FEVSQHWHSLNDNDPAQQWIRSVIKE 299 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 126/298 (42%), Gaps = 7/298 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +D+ LL +F+A+ + + AA + LT SA+SQ + +LR IF DPLFIR G+ Sbjct: 5 PRVDTLDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRTANGM 64 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A+ L +++ L + + ++ +R +A + + LP + R I+ Sbjct: 65 EPTPHALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVVRRIR 124 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P L + + + ++ DL + + LF + + + NP Sbjct: 125 EIAPNLRITIVHVGPRGGQREIESGSADLALGVFQQPPIGISTCELFRYTLQCVADKNNP 184 Query: 199 LL-SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 L R+ A+H+ + + + V+ + R+I + + ++I LV + Sbjct: 185 RLKQGTMSRDEYLEASHIAVGENNVPGTLVEVIVEALGLKRKIALVTPHFVSIPNLVLGT 244 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 D++ PS + + L P P E I ++ ++ DP + ++ + Sbjct: 245 DLIGTFPSSAQDAYPFSNQLCFFPIPFPISESIAMAM-WHPRFDGDPGHMWLRNLFAD 301 >UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida KT2440 RepID=Q88LJ0_PSEPK Length = 320 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 127/279 (45%), Gaps = 8/279 (2%) Query: 41 YVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGL 100 Y + + AA+ L ++ S S+++LR F D LF+ G+G+ PT F + + +S L Sbjct: 18 YREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGMRPTPFTVSIAASVSGVL 77 Query: 101 ESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQLLLR--NPPISD 155 E I + + ++ + R TI+T+ + +P I R + P LR + P Sbjct: 78 ERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLGEDAPNTDLRCVSLPHQQ 137 Query: 156 AENQLSQFQTDLIIDNMFCT-NRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAH 214 E L Q DL + V+ LF N I R +P + E A H Sbjct: 138 LEQALEQGSVDLAVGYFPDLQGEQVKTQALFEHNFTCIVRRNHPSIGDTLSLEQFLAADH 197 Query: 215 VLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRC 274 +++ E ++ QR++E+ R+++ + +++ L+A+++M+A +P F+ Sbjct: 198 LVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIASTNMVATVPLSLGVWFA-S 256 Query: 275 WPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 ++ L P + E+ + +H+++ DP + + + Sbjct: 257 EQIKML-TPPIEVEKFELKLHWHRQMEDDPAVSWFRNAV 294 >UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPL7_GRABC Length = 308 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 113/300 (37%), Gaps = 6/300 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 + L +DLNLLT F+A+Y + + AA+ + + SA+S ++ +LR D LF+R Sbjct: 1 MSIVHRNLSRLDLNLLTAFDAIYTERSVTKAAECIGVGQSAMSHNLARLREALQDELFVR 60 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVI 135 G+ PT A + + + L ++ L S+ +R I ++ +L++P + Sbjct: 61 TPSGMEPTPRARAIADTVRNLLWTVQDKLLTTRSFTPATAERIWRIGLADNIESLLMPPL 120 Query: 136 YRAIKTHYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 + P + ++ L + + D+ I + D+ + + Sbjct: 121 LDMMLKEAPGMRIQAIFTDGLRVLEALDRDELDMGIGVFRHGGNVHKRRNFAPDSYLCLY 180 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 L + + HVL+ + + R I T+ + L++ + Sbjct: 181 DPKQITLEGPITLDQYASLPHVLVSLRGIFHGVADDALSLLGRTRTIVMTTPHFLSVPYV 240 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + + ++ +P + L P P S+ ++ DP + + + Sbjct: 241 LRGAPVITTLPGTLARSAASAHGLCVSPLP-FELAPFRLSMLWHSSYDNDPAHRWLRNTV 299 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 125/294 (42%), Gaps = 6/294 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ++DLNLL +F+A+ + AA+ LNL+ A S+++ +LR DP+F+R G+G+ PT Sbjct: 4 DMDLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGRGLVPTP 63 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 FA+ + LE G L +++ +RT I A + P + R P Sbjct: 64 FALRAAPQVRSLLEGAQGLLIDRKNFEPAELERTFVIRINEGTAASLTPALVRRFAAEAP 123 Query: 145 QLLLRNP-PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL-SL 202 ++R ++ + L DL I + V +L+ + V + + +PL + Sbjct: 124 NAVIRCVGEGNEDVDSLRNGSIDLDIGADPLPSSDVCSEILYREGHVGLVSKSSPLARTA 183 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 + + HV + + + + R++ + + A + A+SD++A+ Sbjct: 184 QPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVASPVAAALMAADSDLVAL 243 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +P R F+ + P+ + ++ DP + + +R A Sbjct: 244 VPERLARYFAARLDVAWFAVPT-ELPAVTIHQQWHGRLDHDPAHKWLREQVREA 296 >UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC13_VIBFU Length = 310 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 118/297 (39%), Gaps = 10/297 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 NIDLNL+ +F VY + + A LN++ SA S S+ +LR D LFIR Sbjct: 1 MKKFDNIDLNLMKVFYYVYETQSVQMTADRLNISQSACSHSLARLRSRLNDELFIRINGK 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + PT A L + I LE + L+ +D Q I+ V+P + + Sbjct: 61 MIPTNQAEQLAQSIQPALELLYSGLNTATPFDPAVGQHHFVISGYDFSAWCVMPTLTAYL 120 Query: 140 KTHYPQLLLRNPPISD--AENQLSQFQTD--LIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 H+P + +R L + D L D+ + + + + + + Sbjct: 121 AEHFPNITVRLVQSDKQIPTEHLESGEIDLSLGFDHEAEQSNHIGNAIWQSGQYCIAMDN 180 Query: 196 GNPLL--SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 + L D +T HVL+ P + + + ++ RQ+ T ++L+ L Sbjct: 181 QHDALMAGRPLDLDTFLAYPHVLVTPWNEPRGIVDATLGKLNKKRQVAVTLPSVLSAPFL 240 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVI 310 + ++ P + + L + P + Q ++++K +DP ++ +I Sbjct: 241 LKGTNYFLAAPESYLETLADTLQLAFVA-PPIPIPQYHIKLYWHKVREKDPKVNWLI 296 >UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XJ4_PSEA6 Length = 299 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 126/296 (42%), Gaps = 6/296 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL +A+ + + A + ++L+ S +S ++ +LR F D LF++ G+ + Sbjct: 1 MRFKGLDLNLLVALDALIAERNVTRAGERIHLSQSGMSSAVSRLRQYFDDELFVQVGREL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT+ L + + + L + + +D +R IA + +++P + + Sbjct: 61 IPTSLTETLAKPVRRILVEMENTIISRPKFDPASDERCYRIAASELTTMVLMPTVISRLA 120 Query: 141 THYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L I + + L + DL+I T ++ + IC + N + Sbjct: 121 QDAPNIRLNLSTIGET-DLLDKGDIDLMIIPKQFTQDGHPFDEIYQEGYKCICWQENTSI 179 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQR-VQEMFPDRQINFTSYNILTIAALVANSDM 259 + E +A HV++ + N + R++ + N+L +L+ + Sbjct: 180 GEKITFEDYQSAGHVVVSYGKNNAPAFDSWFMSHYGISRRVEIMTSNLLAPPSLIIGTQR 239 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A + SR + S+ P+ L P + + S+ Y++ D L + +I + Sbjct: 240 IATVHSRLAQIVSQSLPIRVLQ-PPIEIPPLTQSMQYHRNRENDVGLSWLRQLIID 294 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 120/298 (40%), Gaps = 10/298 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L IDLNL +F+A+Y + + AA++LNLT A+S ++ ++R DPLF+ G+ Sbjct: 18 MRLSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAGM 77 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT FA ++ + + L+ + ++ +D +R ++ + AL+LP + ++ Sbjct: 78 MPTPFAENIVGRVREALQLLDSSVHEGDVFDPASSERVFRLSMSDLTEALLLPALGELLQ 137 Query: 141 THYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + +R + L+ D+ ID + + L D + R+G+P Sbjct: 138 RQAPGMHVRSYTMDRREIATALANGTVDIAIDAPLLGDPHLHQAPLVRDRYACMIRDGHP 197 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + H+ + + + + + R I + + + D Sbjct: 198 FKGDTLTMDDYLAMGHIHVSSRRKGSGHVDAELTRLGLRRNIQMRVQHYMVAPLIAMRGD 257 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + P R + P L P +++ ++++ + +D + + + Sbjct: 258 LALTAPLRLLQRY----PARILELP-FEMPGLEYFCYWHRSADQDQANRWLRERLAEL 310 >UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=Gammaproteobacteria RepID=A7K354_VIBSE Length = 314 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 75/306 (24%), Positives = 135/306 (44%), Gaps = 8/306 (2%) Query: 13 RKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFP 72 K +E K I RNIDLNLL F +Y ++ + AA+ ++ SA+S S+ +LR++F Sbjct: 4 DKGAEVKEDI--QWRNIDLNLLVTFSYLYRYRSVSVAAEKSYVSQSAMSHSLSRLRLLFD 61 Query: 73 DPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGA 129 DPLF RKG + PT A H+ + L+SI L + ++ + I T Sbjct: 62 DPLFERKGHKMEPTEHAHHIAPTVHHLLDSIAKDLLTKSAFQPENYAGICRIGLTDYAEF 121 Query: 130 LVLPVIYRAIKTHYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTD 187 + P +Y I+ P Q+ N S+ + D+II +M + + L+T+ Sbjct: 122 IFAPRLYDEIRQRAPEAQISFINVNRSNYVALTEHEKLDVIIGSMPVLDDNFESLYLYTE 181 Query: 188 NMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNI 247 V +C + + E N L+ P+ + + Q++ E R++ S N Sbjct: 182 KHVCMCDKQVLKGETQLSLEAFANIEQALVSPDGSLKTQVDQKLAEHGLSRKVTVASRNF 241 Query: 248 LTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILH 307 LTI L+ D++AI+P + L + P + D ++ ++ + Sbjct: 242 LTIRHLLKKRDLIAIVPEKMALAEGFSDDLITV-NPPIAVADFDIAMLWHSSRNNEDKGI 300 Query: 308 GVIDVI 313 + +++ Sbjct: 301 WLRELV 306 >UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=Burkholderia RepID=A1UYG7_BURMS Length = 439 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 119/294 (40%), Gaps = 7/294 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 +DLNL + +AVYV GI AA+ L+LT A++ ++ +LR F DPLF+R+G V PT Sbjct: 136 HRLDLNLFRVLDAVYVQGGISAAARALHLTQPAVTHALNRLRAHFGDPLFVRQGNKVVPT 195 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHY 143 + + + L+ + A + + + + + ++ LP + + Sbjct: 196 ERTREVIADVQRHLKGLQDAARAQTRFSPGALDMSFVVGVRDVLESIALPQLVETLAREA 255 Query: 144 PQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + L R P++D +L DL I+ + + D +V+ R + L Sbjct: 256 PGVRLVSRRVPVADIGRELGSGNLDLAIERRVPAGPRIVAEHVADDTLVVAMRRDHALAG 315 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 R A HV + P + + L + R+I + +VA+ D+L Sbjct: 316 APLRRADYFAAGHVTVSPLGEPHT-LDVLLGADGRFRRIQLVCQHYFAACQIVASGDLLL 374 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +P + +R PL P P L + ++++ D + Sbjct: 375 TLPRSYALRMTRLLPLAAQPLP-LRLKPYPILAYWHESRELDRAHQWFRQRVIE 427 >UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=Q7MFJ9_VIBVY Length = 314 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 124/296 (41%), Gaps = 5/296 (1%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LR+IDLNLLTI E + +HK I AA+ LN++ A+S+++ +LR F DPL ++ + Sbjct: 7 NLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVNREYR 66 Query: 85 PTAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTH 142 TA +L + L +I L D TI +++P + + Sbjct: 67 LTAKGEYLRRELESSLNTIRQMLVDDAFDPLQYAGVFTIGALDFEMMMIVPKLLARFQQR 126 Query: 143 YPQLLLRNPPISDAENQLSQFQ--TDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P+L L+ P + + DL++ + + V LF DN ++ + + L Sbjct: 127 APKLKLQIVPYNAYMPLHDYLEKVADLLLYSTDDSPTNVFKQRLFNDNYAVVMCQNHVLA 186 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + E + HV++ + + ++ R++ + + + L+ N+D++ Sbjct: 187 NQPMTLERYCRSRHVIVSGNGLGKTDIDHELKRRNQQREVVASLPHFSMVPELLINTDLI 246 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 A +P R + S + + P + ++ +P V I+N Sbjct: 247 ATLPRRLVSHLSHRYEITVAELPFYTAD-FQVEQFWHLIHHSNPAHQWVRQEIKNM 301 >UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ61_9GAMM Length = 302 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 62/301 (20%), Positives = 126/301 (41%), Gaps = 8/301 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLL + +A+ + + AA+ LN++ A+S+++Q+LR DP+ +R G G Sbjct: 1 MNLRSVDLNLLVVLQALIDEQHVSKAAERLNMSQPAVSRALQRLRTTLQDPILVRTGSGY 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 +A A+ L E +S L + + E +D + + + L++P + R ++ Sbjct: 61 DLSARAVVLREQLSHVLHEVQAIMQPEQ-FDPMQAEGVLKLTGLDLELILLMPDVIRMLR 119 Query: 141 THYPQLLLRNPP-ISDAENQLSQFQTDLIIDNMFCT--NRTVQHHVLFTDNMVLICREGN 197 P L + P + + L + I +F + + + V + N Sbjct: 120 EKAPNLRVEVVPQLPEHFELLERGDVHFTITGLFPQTHHDQYRRIEIARTGHVCVMDRDN 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 PL E + NA+H L+ + + + E R++ N +++A S Sbjct: 180 PLAKGELSLQDYANASHGLVSITGKGPGMMDDALGEFGYKRKVMLRLANFMSVAQFCQQS 239 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFP-SLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 D++ +P ++ L P P ++ ++++ DP+ V + Sbjct: 240 DLIFTLPKIMATHLAQGTSLVLRPLPKEFALPEVVLYMYWHDRYHHDPMCSWVRAELAEI 299 Query: 317 F 317 F Sbjct: 300 F 300 >UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZA2_VARPS Length = 317 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 64/303 (21%), Positives = 136/303 (44%), Gaps = 10/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +IDLNL +F+A+Y + + A L +T SA+S +++++R F D LF+R G+ Sbjct: 1 MNINSIDLNLFLVFQAIYATRSVTLAGDRLGMTQSAVSNALKRMRERFNDALFVRSADGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 PT A L I +G+ ++ A+D +++ + R IA +++P + + Sbjct: 61 VPTPVAERLIAPIEEGIACLVQAVDQGRTFEPETSSRIFRIAVNDIGQLVMVPELISVAR 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + +S +A ++ Q D+ + + + LF + V++ + +P Sbjct: 121 GIAPGVRFETVDVSVAEARQRMLHGQIDVALGSWEAMGPSFYQQRLFDETFVVLMSKASP 180 Query: 199 LLSLE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFP--DRQINFTSYNILTIAALVA 255 L + E + + A H+ P+ S L+Q ++ R++ T+ + L + ++VA Sbjct: 181 LGTRERIELDDYLAAEHIAYRPQGTTDSQLQQTLERAGALDRRRVVLTAAHSLGLTSIVA 240 Query: 256 NSDMLAIIPSRFYN-LFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 S +L P+R + + L + P + +++ +D + ++I Sbjct: 241 TSGLLLTAPARLAKAMVASRADLHSVDAP-FEVRPFEIRQQWHERFHQDSGNRWLRELIF 299 Query: 315 NAF 317 F Sbjct: 300 GLF 302 >UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A4JED2_BURVG Length = 308 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 126/297 (42%), Gaps = 5/297 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +DLNLL +A+ + I AA+ ++L+ SA S ++ +LR F D L ++ G+ + Sbjct: 1 MRFNKLDLNLLVALDALLSEQNISRAAEKIHLSQSATSNALARLREYFDDELLVQVGRKM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIK 140 PT A L + + L + + + + R + + ++P ++R Sbjct: 61 EPTPRAEALKDAVRDILVRVDATVTAQPEFVPAQACRLFRLFVSDYTMTTLIPHLFRLAY 120 Query: 141 THYPQLLLRNPP-ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + P ++ L + + DL+I + VL + + E +PL Sbjct: 121 AQAPGIGFDLRPQVAYPHRVLERGEADLLIIPKEYCSTEHPAEVLLEETFCCVLWEHSPL 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 E +E A H+++ E + +Q + R++ ++Y+ L+ A L+ ++ Sbjct: 181 AKGELTKERYMGAGHIVVQVGEGQTALEAWFMQRLGVVRRVEASTYSFLSPAHLLVGTNR 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +A + R +R PL P L ++ S+ ++K D L + +++ A Sbjct: 241 IATMHRRLAEAAARDLPLVLRDVP-LTVPTMEQSVQWHKHRTSDQGLMWLRALLKEA 296 >UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS8_METSB Length = 323 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 132/317 (41%), Gaps = 24/317 (7%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +R IDLNLL +FEAV H+ ++ A++ L +T SA+S ++ +LR D LFI G Sbjct: 1 MVRIRTIDLNLLRVFEAVMRHRSVIRASRELGVTASAVSHALSRLRQALGDELFISGEAG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEG--SYDKQRTITIATTPSVGALVLPVIYRAIK 140 + PTA A+ L I GLE I A+ + D RT IA T V +LP + + Sbjct: 61 MEPTARALELEPAIRDGLERIDHAVGAQPFVPTDAFRTFRIAATDYVAVAILPQLVGRLA 120 Query: 141 THYPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 PQ+ LR P +D L + + D ++ ++ + + ++ R G+P Sbjct: 121 EVAPQIDLRIFPFNRTDVVRHLDEGRIDFVMGWFGDLPDRMRRATIVVEKEAMVVRTGHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDR-------------------Q 239 L +E + + H+++ + + + R + Sbjct: 181 LTEGPLTKERLFSFPHIVVELIGTEEAAVDGFFDDRGVWRRVWIERLLIEADADQGEVGR 240 Query: 240 INFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKF 299 + + + + +V SDM+A +PS L L P + + +++ Sbjct: 241 VAVSVPHYAAVPPMVRVSDMVATLPSALARAAVEQGSLVMLDLPYEPL-AVPVEMVWHQR 299 Query: 300 SLRDPILHGVIDVIRNA 316 + RD ++ + +A Sbjct: 300 TERDEGSQWLLGELISA 316 >UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D3I0_AGRT5 Length = 316 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 121/308 (39%), Gaps = 16/308 (5%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 L ++DLNLL + A+ V + A + + L+ A+S +++++R I D LF + +G Sbjct: 5 QLGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTSRGFV 64 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 T F + + + +E + ++D R I +++P + +++ Sbjct: 65 MTRFCTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVERVRS 124 Query: 142 HYPQLLLRNPPISD------------AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNM 189 +L + + L++ D+ + + LFT+ Sbjct: 125 EAEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAENFPARYRCASLFTERR 184 Query: 190 VLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 V I NP + + + HV + + +R+ M +R++ + Sbjct: 185 VCIMSANNPAAKEPLTLDALLSLGHVKVTSSPSRRGWIDERLDAMGLERRVVAVVPHFSA 244 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 A+V+ SD++A++P LF R L L P E+Q S+ + RDP + Sbjct: 245 AVAIVSRSDLVAMMPESVAKLFERSHELLLLESPFEEEKQST-SMIWLAEKERDPASLWL 303 Query: 310 IDVIRNAF 317 + I F Sbjct: 304 REQISACF 311 >UniRef50_B7CP85 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CP85_BURPS Length = 305 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 113/299 (37%), Gaps = 5/299 (1%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 +R DLNLL + + + AA +L+ A+S+ +Q+LR F D L +R Sbjct: 1 MHMKHIRGADLNLLLAAFVLLEERQVSKAADRYHLSQPAMSRMLQRLRDTFGDELLVRTR 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRA 138 G PT ++ + + L + L + + + T +A T ++ P ++ Sbjct: 61 GGFEPTVRGRYILHELGELLPRLDALLRGGLFDPTEAEDTFRVACTDYATTILGPRLFER 120 Query: 139 IKTHYPQLLLRNPPISD-AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + P + + D A + + DL++ T+ LF D+ V + + Sbjct: 121 VFREAPNVSMDVVAWHDHAFEAIEHGRLDLVL-WPNEVPDTLYSETLFEDDFVCMMSSDH 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P H ++ + + QR+ +M R +A + Sbjct: 180 PSGDGPLVLRDYLRFPHAVVSVLGGKQTIVEQRLHDMGVRRAAGLRVSYFSGAITAIART 239 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 ++A +P R L+ + + P++ ++ + + ++ + D L + IR A Sbjct: 240 ALIATVPRRLAMLYRDRANIRIVEAPAMF-GKLSYKMVWHPRADGDLALQWLRQTIRAA 297 >UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUZ7_HALO1 Length = 306 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 120/292 (41%), Gaps = 7/292 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + ID NLL +A+ + AA + +T SA+S ++ +LR DPL +R G+ + Sbjct: 3 IYGIDANLLVSLDALLREASVTRAAHRVGITQSAMSHALGRLRDHLGDPLLVRAGRNMVL 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 TA A L +S +E + + ++ +R + T +++P + R ++ Sbjct: 63 TAKAESLAPRVSVLVEEMSRVFAPDEEFEPAALRRGFALRATDHAQFVLMPEVDRLLRAE 122 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + L +S A L Q Q+DL + + L TD V + R +P ++ Sbjct: 123 APGVDLVVTALSGGAVAPLRQAQSDLTLGTFSDHPSDIHSQALLTDRFVCLVRGDHPAIA 182 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 H+ + P + + + + E+ R+I+ ++L L+A+SD + Sbjct: 183 RGLGVAQYAAMTHIHVGPAQ--LGVVDRVLGELGIARRISRVVPHVLVAPLLIADSDAVV 240 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + R + L P + S+ +++ DP + D + Sbjct: 241 TMSERLAQRALPGAEVAMLE-PPVPLPPCTLSMAWHERHDADPAHRWLRDAV 291 >UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4T0_ACAM1 Length = 307 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 118/281 (41%), Gaps = 9/281 (3%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG-QGVTPTAFAMHLHE 94 F+ + + AA+ LN++ SA+S ++++LR + DP+ IR + + T +A+ + Sbjct: 18 AFDILVQEASVTQAAEKLNMSQSAMSHALKRLRAVLKDPILIRTSQRQMEVTPYALEISP 77 Query: 95 YISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRN- 150 + Q L I L + ++ Q IAT V A + + + + P + +R Sbjct: 78 QVRQILAEIQETLLAKDVFNPATAQEDFRIATNDYVEATLSANLLQQLTQQAPGIQIRVK 137 Query: 151 -PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETI 209 L DL I R L+ + V + + PL E E Sbjct: 138 GLNKDAVLAALDDNSIDLFIGAGLDLKRWHVQESLYQEEFVCVLQSDCPL--TELSLEQY 195 Query: 210 DNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYN 269 H+L+ ++ +++ RQ+ +++ + + + L+ANSD +A++P R Sbjct: 196 VERTHILVSFQDDFRGIGDLILEQQQQSRQVVWSTPHFMVVPFLLANSDCVALLPKRMAE 255 Query: 270 LFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVI 310 ++ L+ LP P ++ + S+ +++ P + Sbjct: 256 RCAKEMGLKLLP-PPIDVTRFTVSMIWHQRHNNRPQHQWLR 295 >UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR04_HIRBI Length = 302 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 131/302 (43%), Gaps = 11/302 (3%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 +I + +DLNLL +FEAVY + + AA +L+L+PSA+S ++++LR DPLF++ Sbjct: 1 MNKIHSRTDRLDLNLLKVFEAVYREQNLTRAANLLSLSPSAVSHALRRLRAHLNDPLFVK 60 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVI 135 +G+ + PT + + ++ + L G +D ++ TI ++ + P Sbjct: 61 EGRIMRPTPVCARMAPDLLDEIDRLRALLQSWGKFDPAQSKIVFTIGMPDAMEIVFFPEF 120 Query: 136 YRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 I+ P + + + + LS D+ +D T++ ++HH L D+ I Sbjct: 121 VEKIRQLAPNVRIISARYDRNEMVASLSGHTLDICVDIALPTSKQLRHHPLTADDW-CIV 179 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 + + + H+ + +++ R + N L+ A+ Sbjct: 180 SKTHTI----QTAADYLAQEHIAVSARTVGTVLEDSALEQRGIFRDVRVRCQNYLSALAI 235 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 V SD + +P R + PL+ P + I+ +++++ + D + +++ Sbjct: 236 VERSDRILTMPKRLAQSMIQSRPLKIQDVP-FSMPPIELNLYWHSDNEADSANKWLREIV 294 Query: 314 RN 315 + Sbjct: 295 ID 296 >UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ31_AGRRK Length = 296 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 123/291 (42%), Gaps = 7/291 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNL+ F A+Y + + AA LNLT ++S ++ +LR + D LF R G+ PT A Sbjct: 3 DLNLIRAFIAIYETESVSGAAVKLNLTQPSVSHALSRLRDMLDDTLFTRTRDGMKPTFVA 62 Query: 90 MHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 ++ L I A+ S+D + +A + LP I + P++ Sbjct: 63 ERMYGIFRSALSEIETAIASRWSFDPKSSNQVFKLAFSDLGEMTFLPHILPRLSQEAPKV 122 Query: 147 LLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + + ++ + + D I N + +F + V + +P + + Sbjct: 123 GIEVVELEVEKLDDWFATGKIDAAIFNSTSAKVQSRSEPIFQERYVCLVSARHPRIRDQV 182 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 E + H+++ + +++ + RQ++ + + +VA +++LA +P Sbjct: 183 SLEQYLSEGHIVVSSH-SGHRQVEDQIRAIGAARQVSLRLPHFTGLHDIVAKTELLATLP 241 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 SR ++F+ ++ P L + + +H+ + + +++++ Sbjct: 242 SRTAHMFASSGMVKYCTIP-LPIPEFEVRLHWRETDGEIEAQAWLREILKS 291 >UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=Gammaproteobacteria RepID=Q5E2I6_VIBF1 Length = 323 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 123/293 (41%), Gaps = 7/293 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR +DLNLLT+F+AV + I AA+ L ++ A+S ++ +L+++F D LFIR G+G+ P Sbjct: 18 LRGVDLNLLTVFDAVMQEQNITRAAQNLGMSQPAVSNAVSRLKLMFNDELFIRHGRGIQP 77 Query: 86 TAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 T A L + Q L+ + L R ++ P I + I+ Sbjct: 78 TQRARQLFAPMRQALQLVKNELPSSTFSPETSMRQFKLSICSPSDIRFAPRIMKDIQNKA 137 Query: 144 PQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + L+ D +L + D +ID + LFTD +V++ +P L Sbjct: 138 PHISLKLSGEHEPDIAQKLRYQEVDFVIDYVRFDEPGFMSTELFTDELVVVASVNHPRLQ 197 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 ++E + + H + + ++ + +I I +V+ S+++ Sbjct: 198 NGINKEQLASEKHAVPARIANTKGFADHLYVDSLYEQ--AYKGASISNILYVVSQSELIT 255 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + P N L LP P + + I + ++ +D + D + Sbjct: 256 VAPKWLVNSMPNRDQLMVLPLP-IESKGISGYLSWHDSYQKDKGHIWMRDQLM 307 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 121/303 (39%), Gaps = 11/303 (3%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 Q LR IDLNLL + +A+ + + AA+ L ++ A+S ++ +LR +F DPL +R Sbjct: 2 QQIHDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRVK 61 Query: 81 QGVTPTAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIATTPSVGALVLPVIYRA 138 + T+ A+ L + L+ + G + +R + + +VLP + R Sbjct: 62 SRMQLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRRHFRLGMSDYGAWVVLPALLRQ 121 Query: 139 IKTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE- 195 + P + P + Q+++ Q D + V+ LF + V +CR Sbjct: 122 QQALAPGVSFGIVQEPRLETARQVAEGQLDCALGVFPLLPEGVRARRLFEERFVCVCRRS 181 Query: 196 --GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 P + A HV + ++ + +++ RQ+ T + AL Sbjct: 182 LFDRP---DGLSLDRYLAARHVRVSLQDNPAEEVDSALEKRGLRRQVALTLPHFTVAPAL 238 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +A +D++ I R L P L + D+ + + R+ + + I Sbjct: 239 LAGTDLVLTIAERTLERLRLPEELALCE-PPLAIPRFDYVQIWRGDAEREAAGAWLREQI 297 Query: 314 RNA 316 + A Sbjct: 298 QAA 300 >UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C014_DICD5 Length = 303 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 10/280 (3%) Query: 44 KGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRK--GQGVTPTAFAMHLHEYISQGLE 101 + I +AA L ++ A+S + +LR F D LFI G+GV PT A L I+ L Sbjct: 22 QNITHAAARLGISQPAMSARLSRLRATFGDQLFIPSPHGRGVLPTPRAESLRPQIASVLH 81 Query: 102 SILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRN--PPISDAE 157 I L+ + RT IA + ++ + P + LR P + Sbjct: 82 DISAMLEPIHFDAASSSRTFVIALHENPALMLGADLVNQFSEAAPGIRLRFALPESARLP 141 Query: 158 NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLL 217 QL D+ I + LF D R+G+P S D ++ H+++ Sbjct: 142 EQLETGDIDIYIGVNAGAHDAWIRRKLFDDEFATAQRKGHPRGSAPLDLKSYCALPHLVV 201 Query: 218 LPEEQNFSG-LRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP 276 E F+G + Q + + R + ++ + +VA +D+L +P R F++ Sbjct: 202 SSEGDPFTGFVDQTLAGLGYQRSVVMSTQSYAMAPPIVAGTDLLCTLPRRMLQRFTQTLD 261 Query: 277 LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + P P + I S++++ + DP + + A Sbjct: 262 IFDPPLP---LQPIVISMYWHPKNSHDPANVWLRAQLLCA 298 >UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae RepID=Q7MCM8_VIBVY Length = 298 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 5/293 (1%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 ID NLL +F VY H+ I AA + LT +S +++L+ LF R G+G+ PT Sbjct: 5 IDFNLLKVFVTVYRHRSITLAADAMGLTQPGVSGILKRLQEQLGVTLFTRDGRGIAPTHH 64 Query: 89 AMHLHEYISQGLESILGALDIEGSY--DKQRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 A L + L I AL+ ++ D R I + +LP I + Sbjct: 65 AHELARQVEPALSQIHNALESLEAFRTDTYRKFVIYAPEPLMLTLLPKIEGDSTLGKIDI 124 Query: 147 LLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 L++ P + + +L+Q Q DL ID + + + L D + LI R G+P + Sbjct: 125 ELQHMPYDVDEQFTRLNQQQADLAIDFVHHSAPSFYSEKLMNDEICLIARRGHPRIQGAI 184 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 R+ H+ L +N +E R++ +++ +LVA SD +A++ Sbjct: 185 SRDEYYQEKHITLKMRRENVYLADYFTEEFLNVRRVAAECDSMVAQMSLVATSDCIAMVT 244 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 F+ L+ L P I + + + + P + + + F Sbjct: 245 RSLAEQFAETLGLQVLHSPMTAIP-ITYRLLIHNREINSPANQWLRERLSRYF 296 >UniRef50_A9R140 Substrate-binding transcriptional regulator, LysR family n=34 Tax=Enterobacteriaceae RepID=A9R140_YERPG Length = 322 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 137/299 (45%), Gaps = 6/299 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 K I LR++DLNLLT+F+AV + + AA+ L ++ A+S ++ +L+V+F D LF+R Sbjct: 19 KESIDVHLRSVDLNLLTVFDAVMQMQNVTRAAQSLGMSQPAVSNAVARLKVMFNDELFVR 78 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIATTPSVGALVLPVIY 136 G+G+ PTA A L + Q L+ + L + + +R ++ + + I Sbjct: 79 YGRGIQPTARARQLFGPVRQALQLVQNELPGAGFEAKNSERLFNLSICSPLDVRLAAQIV 138 Query: 137 RAIKTHYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICR 194 + +K P + L + E+QL +T+ +I LF D +VL Sbjct: 139 QRVKQSAPNVQLVIKSYLNDNIEHQLRYQETEFVIGYTEFDRPDFHRIPLFKDELVLAVS 198 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 + +P ++ + + +H ++ +++ S + I + S ++ ++ +V Sbjct: 199 KDHPRINDSITENQLLSESHAVVSLDKKG-SFSEPYYDSTTSTQSIAYESTDMNSVLNIV 257 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + + +AI P +S L+ + P N + + + +++ + RD + ++ Sbjct: 258 SQTYFVAIAPRWLVKTYSEALNLKLISLPWENTSRACY-LTWHESTDRDKGHQWMKALL 315 >UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=Vibrionaceae RepID=Q5E7C7_VIBF1 Length = 330 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 129/296 (43%), Gaps = 6/296 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 + +DLNLL F + K + AA L + SA+S S+ +LR + DPLF R+G + Sbjct: 25 NWKAVDLNLLVAFSTLMETKSVSLAANKLFVGQSAMSHSLSRLRELLHDPLFERQGHQMI 84 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PTA A+ L+ +++ L++I G + +++ T I T L I+ AI Sbjct: 85 PTAKAIQLYPLVNKVLQTISGDILKVDTFEASEFTGTFKIGMTDYAELLFAADIFDAIHQ 144 Query: 142 HYPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P L ++ +++ DL+I +M + Q+ L+T+ V + L Sbjct: 145 LAPNAQLCFTTVDKANYQDRFDSEPLDLVIGSMKPELKEFQYQTLYTEKHVCMWDGQRHL 204 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 S + + H L+ P+ +G+ + ++ + R ++ S + LTI L+ D+ Sbjct: 205 FSSPITLDDYISLPHALVSPDGALKTGVDKELKALGVGRSVSVASKHFLTIRHLMKKRDL 264 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + ++P L L P +N + D + + + + + +++ Sbjct: 265 ICVVPELMAQLDLFSEKLVHSE-PPINVGEFDIQLIWQTRNKENKRYQWLKELLIQ 319 >UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=Shewanella RepID=B8E7T8_SHEB2 Length = 313 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 131/299 (43%), Gaps = 6/299 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 T + +DLNLL +F VY + AA+ L+LT S++S +I + RV + LF R G+G Sbjct: 1 MPTQKPLDLNLLRVFMVVYRTRSFTQAAEELDLTQSSVSNAISRFRVWVGESLFNRVGRG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + PTA A ++ Q + I L +D QR + SV + + + Sbjct: 61 IEPTAVAREMYRKFEQPMADIETVLLGFEHFDPKCSQRRFYVYANESVIEALQTGVQALL 120 Query: 140 KTHYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + +++ R P +A+ + + + ID + +LFT+ +V I + Sbjct: 121 QDADIEVIFRESPPQEADLYRDILLERVAVAIDIKPAQQSLLSSKLLFTETLVCIVSRQH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P + HV L N + + + P R++ ++L++ A V S Sbjct: 181 PRIQGAITHGQYFEEKHVFLNMRRFNLTAGDLFTEGVLPRRKMYSEQSSLLSMFATVGKS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + + I P R+ + ++ + ++ LP P L ID + ++ ++P + ++ +A Sbjct: 241 EAIGIAPLRYASQYAELFGIQILPMP-LKTRPIDLYMVWSSKYTQNPSHQWLRSLLLDA 298 >UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XG7_DESDG Length = 309 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 124/300 (41%), Gaps = 12/300 (4%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +++LNLL +A+ + AA+ L++T S +S+++ +LR +F DPL +R G + Sbjct: 1 MDISSVNLNLLVALKALLDEGNVTRAAERLHITQSGMSKNLAQLRELFDDPLLVRSGNAL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L + L ++ AL +D +R+ T+A T V +LP AI Sbjct: 61 VLTERARELEGPLEMVLGNV-HALFEAQRFDPATCRRSFTLAVTDYVAQYILPDALGAIL 119 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + ++ D+ L++ + D+ +V+ + D + R G+PL Sbjct: 120 AAAPGIDIQAIGWEPDSMRALAEGKIDMATCLTEGVPASVEQLRVGEDRFACLMRAGHPL 179 Query: 200 -LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + A H + + + + ++ R I + +V+ +D Sbjct: 180 AAAGAMRLDRYVQADHAAITIGGDKVRIIDRVLGKLGHSRNIRLRVPFYASAVEIVSRTD 239 Query: 259 MLAIIPSRFYNLFSRCWP-----LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +L +P+ + L P P + ++SI ++ DP V +++ Sbjct: 240 LLLTLPAHVARNVIQARNPSEPALAWAPLP-FAVDSFEYSIIWHARFHGDPGHRWVREML 298 >UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=A4XED3_NOVAD Length = 333 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 120/291 (41%), Gaps = 6/291 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +DLNLL +A+ + + AA L L+ SA S ++ +LR F D L + KG+ + TA Sbjct: 5 RLDLNLLVALDALLTERSVSLAADRLCLSQSATSSALGRLREYFGDELLVVKGRNMILTA 64 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 A L E + LE I + + +D R I I + ++L ++ P Sbjct: 65 RAEELIEPVRAVLEQIRTTVAVAPPFDPATTDRVIRIMASDYSTEVLLTDALATMERCAP 124 Query: 145 QLLLRNPPISDAE-NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + P+ DA + + DL++ + + +LF D+ V++ NP ++ Sbjct: 125 SMRFEIQPMHDAPIEAIERGYIDLLLTIDYAISSDHPSQILFEDDYVVVGAADNPAMAEP 184 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQR-VQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 R+ HV + V+ R++ + + L++ LV + +A Sbjct: 185 MTRQLYFELGHVSARFGKARVPAFEDWFVRRQKQQRRVEVVAPSFLSLPGLVVGTRRIAT 244 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + R + R PL P + I ++ +N + D L V++ + Sbjct: 245 MHRRMAEIVVRNMPLVIREIP-FDIPPIREALQWNIANNNDRALRWVVEQL 294 >UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=Ralstonia solanacearum RepID=A3RSL5_RALSO Length = 304 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 127/297 (42%), Gaps = 11/297 (3%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + +DLNLL +F+A+Y + + AAK N+T A+S ++ +LR +F DPLF+ G+ PT Sbjct: 4 KRLDLNLLGVFQAIYQTRNVTLAAKRHNITQPAMSNALARLREVFADPLFVPSPYGMRPT 63 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHY 143 +A L I + L + AL + +D R + T LP + ++ Sbjct: 64 PYAQQLAVPIDRALREVEQALAMSKGFDPASSDREFRMHLTDFAQVAFLPALLERLRALA 123 Query: 144 PQLLLRNPPISD--AENQLSQFQTDLIIDNMF-CTNRTVQHHVLFTDNMVLICREGNPLL 200 P++++R +++ L + + D M + V + LF D ++ R G+PL Sbjct: 124 PRVVIRVEALAEETILPALDEGRLDFAFGRMSKAAGQGVGRYTLFKDRYAVLMRAGHPLA 183 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 R+ A L+ + + +M I + L ++ +V SD++ Sbjct: 184 GHALSRKDFAAAGQALICTSG--HRAIEDVLVKMGA--HIALRLPSFLVVSRIVETSDLM 239 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 I+P+R + P + D S+ +++ DP + ++ F Sbjct: 240 VIVPARLAEQCAATGLFHTAALP-VAMPAFDVSLFWSESRSADPAHAWMRGQLQQLF 295 >UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=Burkholderia RepID=B2JFW9_BURP8 Length = 342 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 112/299 (37%), Gaps = 8/299 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 T ++D+ L+ + + V + + A LN T AIS +++KLR DP+ +R G+ Sbjct: 4 DTAASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGM 63 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT + L + L + G +D +RT IA + +P + + Sbjct: 64 VPTEYGESLLAAAQKVLRDVDFVATPHGDFDPARSRRTFRIAAPDYLNDFFMPTVIAQFR 123 Query: 141 THYPQLLLRNP---PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 P L P+ D L + DL+I N + + LF+D +V + R + Sbjct: 124 ETAPHARLEIESLGPLFDHTCALDAGELDLVIGNWPKPDLRFERSDLFSDTVVCMMRADH 183 Query: 198 PLLSLEDDRETIDNAAHVL-LLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 PL R+ A H+ + R+I T + ++ Sbjct: 184 PLAKAPLTRDAYLAAPHLAPAHYSGARGGAIDTGFARARASRRIVATLPYFGLVPQVLLQ 243 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 SD++ RF ++ PL + P + +I ++ R + + ++ Sbjct: 244 SDLIFTTTRRFALHYAAMLPLAVVDVP-IPFPRIKCYQMWHPQPDRPSDIAWLRGLMAQ 301 >UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SW87_9BURK Length = 330 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 135/303 (44%), Gaps = 10/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +IDLNL +F+A++ + + A + L +T SA+S +++++R F D LF+R +G+ Sbjct: 1 MNIHSIDLNLFLVFQAIFATRSVTLAGERLGMTQSAVSNALKRMRERFNDVLFVRSAEGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 PT A L + +GL + A+D +++ R IA +++P + + Sbjct: 61 VPTPLAERLIGPVEEGLAAFSQAVDQGRTFEAGTSGRLFRIAVNDIGQLVMMPRLLSLAR 120 Query: 141 THYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + P ++A ++ Q D+ + + + LF + V++ +P Sbjct: 121 GLAPGIRFETVDVPRAEARQRMLHGQIDVALGSWEPMGPSFYQQRLFDETFVVLVARASP 180 Query: 199 LLSLE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFP--DRQINFTSYNILTIAALVA 255 L + + + A H+ P L+Q ++ + R++ T+ + L ++++VA Sbjct: 181 LGTRDSIALDDYLAAEHIAYRPRGTTDHQLQQALERVGALDRRRVVLTAAHSLGLSSIVA 240 Query: 256 NSDMLAIIPSRFYN-LFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + ++ P R + + L L P + S +++ +D + +++ Sbjct: 241 TTGLVLTAPQRLAQAMVASRSDLHILNAP-FEVAPFEISQQWHERFHQDSGNRWLRELMF 299 Query: 315 NAF 317 F Sbjct: 300 GLF 302 >UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0K340_BURCH Length = 303 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 5/296 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +DLNLL +A+ + I AA+ LNL+ SAIS + KLR F D L + G+ + Sbjct: 1 MRFNRLDLNLLVTLDALLDDRRITRAAERLNLSQSAISGMLAKLREYFDDELLVPVGRNL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L + + L + + I+ +++ +R IAT+ V +++ + I+ Sbjct: 61 ELTPLARELVQPVRDLLLQVQTIVAIDPAFEPANARRHFKIATSDYVINVLMHRLIPVIE 120 Query: 141 THYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P L L P DA +L + + D +I LF D+ V + GN + Sbjct: 121 PLAPYLTLELMPQEDAPERLRRGEYDFLIIPEPFKADDHPAIALFDDSYVGVVWNGNRAV 180 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQR-VQEMFPDRQINFTSYNILTIAALVANSDM 259 D + HV L R V+ R++ T+ + ++A ++ + M Sbjct: 181 GASIDVARYEQLDHVATLLGWPRLPSYDSRYVEAQGIRRRVRVTTSDFTSMAPVLIGTQM 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A + R +R PL + Q+ + ++++ +DP + + I + Sbjct: 241 IATMHRRLATELTRRMPLRLVEL-EFPIPQMREFLQWHEYREKDPCHRWLREQIIS 295 >UniRef50_A6FY23 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY23_9DELT Length = 339 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 109/283 (38%), Gaps = 8/283 (2%) Query: 42 VHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLE 101 + AA+ L L+ A+S ++ +LR F DPL +R G+G+ T A L + L Sbjct: 21 QTSSVTGAARRLGLSTPAVSHALARLRERFGDPLLVRAGRGMVLTPRAEQLRPRVRDALS 80 Query: 102 SILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLR-NPPISDAE 157 + G+++ +R+ T++ T V + ++ P + LR D Sbjct: 81 LATLVFEDPGAFEPASMERSFTLSMTDYVLRVFGGPFEARVRAAAPGVDLRVIVNAVDDA 140 Query: 158 NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS---LEDDRETIDNAAH 214 +L TDL++ ++ + ++ +V + RE +P+L+ H Sbjct: 141 ERLRAGDTDLVVGIYGALPPELRTRAIISERLVCVVREAHPVLAPTKRRLTLRQFVTLEH 200 Query: 215 VLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRC 274 V + P Q + R+ E+ R++ + A+SD L + R Sbjct: 201 VQIAPRGQPGGYVDDRLAELGHARRVARAVPFFQLALEMTASSDYLLTVSERIARQLGPE 260 Query: 275 WPLEKLPFPS-LNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 L L PS L E S+ ++ D + + + + Sbjct: 261 LGLRVLEPPSELGLEPYALSMVWHPRFDADAGHRWLREQLVES 303 >UniRef50_B7RV99 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV99_9GAMM Length = 303 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 123/299 (41%), Gaps = 10/299 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L +DLNL +F+A+Y + + A+ L+LT A+S ++ +LR F D LF+R +G+ Sbjct: 1 MRLDKVDLNLFVVFDALYRERSVTRVAQALHLTQPAVSNALSRLRQSFDDQLFVRSPRGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A + + + L + +D + T + + +VLP ++ A+ Sbjct: 61 QPTPVAEAISVDVQKALGLLQKTTLSGQRFDPGSAEMTFRLGMSDVAQNMVLPGLHNALA 120 Query: 141 THYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + + A QL DL++D R + L + + + +P Sbjct: 121 QLAPGVTIEAYYLDRASAVAQLKSGDLDLLLDAPQVNARELGQLHLGSLLYRVAMAKAHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L ++ D + A HV + + + + + R++ AA+ A SD Sbjct: 181 LAQVDLDIDQYLAAKHVHVSARPRGRGQVDLALHAIGHRRKVVVRVQQYAVAAAITAQSD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +L P + L + P E + ++++++ + DP + ++ F Sbjct: 241 LLWTAPGSVIDH----PELHVVETP-FQVESLVLNLYWHRSAAEDPANAWMRKMLAQQF 294 >UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=Rhodobacterales RepID=Q5LN55_SILPO Length = 331 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 123/302 (40%), Gaps = 13/302 (4%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 R DLNLL + +A+ + A + L ++ A+S ++ +LR DPLFIR+G+ + Sbjct: 1 MNFRTFDLNLLRVLDALLSTRSTTRAGQQLGMSQPAVSAALSRLRHALGDPLFIRQGRQL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT +A LH + L L + +D ++T++ + L++P + R + Sbjct: 61 VPTDYAGGLHAPLRDLLGQTEALLAGQPDFDPGAATDSLTLSGSDFYAELLMPRLARHLS 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + ++ + + + Q D+ I T V+ L + + + + R +P Sbjct: 121 HVAPGMRVQLVDLVPDNYVQSVGQSAVDMAILPATPTPDWVEERRLHSSHFLAVARADHP 180 Query: 199 LLSLE-------DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 ++ + + H L PE + + + RQ+ T + Sbjct: 181 EIASAAIAPGAVLPLDLFCSLQHALFSPEGKLHGLGDAALARIGRARQVTMTLPVFSGVL 240 Query: 252 ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVID 311 V+ SD++A+IP + + L P + ++ + ++K + P + D Sbjct: 241 NAVSQSDLIALIPHQLAESVAPRLGLSLY-HPPIPVGPVEIMMVWHKRASTAPAHRWLRD 299 Query: 312 VI 313 I Sbjct: 300 QI 301 >UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteria RepID=Q88I06_PSEPK Length = 312 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 126/295 (42%), Gaps = 6/295 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 ++DLNLL + + + I AA+ L++T SA S + +LR F D L ++ G+ + Sbjct: 1 MRFHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT +A+ L + + + L +I ++ + +D +R + + + ++V + + I Sbjct: 61 QPTPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIH 120 Query: 141 THYPQLLLR-NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 PQ+ P + L + + D++I +LF ++ V + NP Sbjct: 121 QEAPQITFEMIGPGDSSAELLMRGEVDMMIVPERYLIEGHPAQLLFEEDHVCVVWRDNPE 180 Query: 200 LSLEDDRETIDNAAHVLLLP-EEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E H+ + ++ S + + +R++ + + T+ L+ + Sbjct: 181 VGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQLLVGTV 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +A + R L++ + +L P + + + +++ DP+ + + I Sbjct: 241 RVATMHRRLAELYAG-YLPLRLLPPPVKIPVMREFMLWHRSMDGDPMHRWLRERI 294 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 66/322 (20%), Positives = 130/322 (40%), Gaps = 30/322 (9%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +DLNL+ +F+AV + ++ A++ L+L+ SA+S ++ +LR +F+R G+G Sbjct: 20 MIAFDKLDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKG 79 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEG-SYDK---QRTITIATTPSVGALVLPVIYRA 138 ++PT++A+ + + L S+ AL + R+ IA V A +LP + Sbjct: 80 MSPTSYALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSATLLPQLNHQ 139 Query: 139 IKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHV-LFTDNMVLICRE 195 + P + L+ P + D Q+ + D+ I + LF D V IC Sbjct: 140 LSKVAPGIDLQITPATRLDLAEQIDLGRIDVAIGTFRSVPERFRTKPVLFQDE-VFICSG 198 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQN---------------------FSGLRQRVQEM 234 +P+ + + + + ++ + + L Q + E Sbjct: 199 THPISANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTALEQALNEA 258 Query: 235 FPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSI 294 + + L + L+ S++LAI+P F+R + P P Q + Sbjct: 259 GLSMRRQIVLPHFLALPMLLEGSELLAIVPQPLARTFARTLGFKIKPLPYPAARQ-QLDL 317 Query: 295 HYNKFSLRDPILHGVIDVIRNA 316 ++ + DP + + I A Sbjct: 318 IWHSSNDNDPAQLWLHEQISEA 339 >UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobacteraceae RepID=A0NZC9_9RHOB Length = 305 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 5/299 (1%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR+ DLNLL IF A+ I AA + L+PSA+S ++ +LRV+ D LF R +G Sbjct: 1 MVNLRSFDLNLLVIFRAIMQRGSISGAANEIGLSPSAVSHALARLRVMLNDELFFRTAEG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAI 139 V+PT A L I +GL I A+ ++ + + R T+ V +LP + + + Sbjct: 61 VSPTERARELSVDIERGLSFISTAISLQHQFVPAETNRVFTMQVADYVAGFLLPRLAKRL 120 Query: 140 KTHYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 ++ P + + P S E+ + + + V+ L D +V++ R G+P Sbjct: 121 QSEAPGITIDILPFSISPESVWDRVDMQVRLTPGRLQPEMVRSQRLLADEIVVLMRRGHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E HV L + + + R + T + I +VA SD Sbjct: 181 RVDEPMTAELYAELPHVKLSQSATGTTVIEDALAARGLKRHMAMTVASWFEIPDIVARSD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 ++AI P R +L R L P P L+E F + ++ R+P + +I F Sbjct: 241 LIAIAPQRLLSLDPRLGKLHSAPLP-LDEVVFSFDLCWDLRKEREPGQKWLRQLIVEMF 298 >UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383CFA Length = 329 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 118/297 (39%), Gaps = 10/297 (3%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +D+ + + + AA+ L +S ++++LR + DPL +R G + PT Sbjct: 8 TLDVRAMRTLLVLLTECNVSRAAERLGQAQPTVSLALKRLREMLGDPLLVRYGGSLVPTE 67 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 + L + L I L ++D RT +A +G++ LP + R I+ P Sbjct: 68 RGLDLKVSLEAILSEIDARLTPHPTFDPAHSDRTFRLAANNCLGSVFLPPLVRTIRRAAP 127 Query: 145 QLLL---RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 + + + PP+ D Q+++ D +I N ++ L + ++V + R + L Sbjct: 128 GVTVEVGQTPPMEDLLRQMAEGAIDAVIGNWPQPPSHLRISTLLSTDIVCVMRPNHRLAR 187 Query: 202 LE--DDRETIDNAAHVLLLPEEQ-NFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 E D H+ + S + R+ E+ R+I T + ++A SD Sbjct: 188 REGRIDLADFLAEGHLSPTSDRNAQLSPIDGRLIELGLKRRIAVTVPEYAMVPYMLAQSD 247 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +L F ++ + + P ++ F + ++ P + IR+ Sbjct: 248 LLFTTGRHFAEQIAQSFAFSLVDAPE-ELGRMSFYMLWHDCKHHSPAHAWLRRTIRS 303 >UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n=2 Tax=Vibrionaceae RepID=A6CXP0_9VIBR Length = 310 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 16/311 (5%) Query: 11 LSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVI 70 + K E KP + DLNLL +F + Y + + +A+ L+LT SA+S ++ +L+ Sbjct: 1 MDNKKLESKPN-----KKFDLNLLRVFISTYETESVTKSAERLDLTQSAVSNALTRLKEN 55 Query: 71 FPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSV 127 LF R G+G+ PT +A L+E + SI + ++D QRT + + Sbjct: 56 VGKELFSRTGRGIKPTRYAKELYEQTHDHIMSIEKVIQGLEAFDPKKTQRTFVVYCHEAA 115 Query: 128 GALVLPVIYRAIKTHYPQ--LLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHV 183 + + + T YP ++L+ P DA L + DL+ID ++ Q + Sbjct: 116 MLRLQKRL--HVCTTYPNIEIILKELPPKDARIYEDLQMEKVDLVIDVSPSDSKVFQSEL 173 Query: 184 LFTDNMVLICREGNPLL-SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINF 242 L ++ + + + +P + + D+ +HVLL N + + V E+ P R++ Sbjct: 174 LHSEGLTCVASKNHPRIQQGKFDKSNYMTESHVLLNIRRHNLTFVEWLVSEVLPPRKVFS 233 Query: 243 TSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLR 302 ++L + V+NS +A+IP +S + L+ PFP + D + + Sbjct: 234 QHSSLLGMLPSVSNSQAIAVIPLSVAEQYSDIFQLQTFPFP-FETKTFDSYMVWPSKMSH 292 Query: 303 DPILHGVIDVI 313 + + + + Sbjct: 293 NSAITWLRQQM 303 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 23/312 (7%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 R++DLNLL +F+A+ + AA +L LTPSA+S S+ +LR I D LF+R +G+ P Sbjct: 6 FRSLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGAKGMNP 65 Query: 86 TAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 T A+ L I + L I AL D R +IA V A+++P + + Sbjct: 66 TPKALALAVPIRRALVDIQQALNGDSFVPEKTDRRFSIACGDYVTAVLMPEVIARFRKAA 125 Query: 144 PQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 P LR P+ +L + DL + + LF D+MV + R +P + + Sbjct: 126 PLAELRIQPVGAVMKELDAGRIDLAMGGFERIPERLASEPLFADDMVWVMRADSPFANRQ 185 Query: 204 DDRETIDNAAHVLLLPEEQNFSG--------------------LRQRVQEMFPDRQINFT 243 E + H+ + + + + L Q +E R + T Sbjct: 186 PTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILDQYFEERGLRRTVAMT 245 Query: 244 SYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRD 303 + N + A+VA D+ A++P F+ + L P S ++++ Sbjct: 246 APNPIVAMAIVAECDLAAMMPRNLAEAFADRYKLALWK-PPHPSALFQISTVWHRWHGDQ 304 Query: 304 PILHGVIDVIRN 315 P + + +IR+ Sbjct: 305 PAVDWLRAMIRS 316 >UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae RepID=Q7MEK1_VIBVY Length = 307 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 136/297 (45%), Gaps = 6/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 ++N DLNL+ IF A++ + + AA L+++ A+S+++ +LR I+ +PLF R GV Sbjct: 6 AMKNTDLNLIPIFVAIFEEQNLSKAAARLDISQPAVSKALARLRDIYDEPLFHRSPSGVE 65 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKT 141 PT+FA+ ++ + ++ L ++ R +IA ++P + + I+ Sbjct: 66 PTSFAVDIYPAMLTAFKNFTSTLSASSEFEAKVSNRIFSIACVSVASYELMPQLLKQIRQ 125 Query: 142 HYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 H P + L P+ D E+ L + DLIID T++ +F++ ++++C +P Sbjct: 126 HAPNISLEVHPLFTEDYESDLRLQRYDLIIDMAPRGWTTLKVEPIFSERLMVVCCADHPR 185 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 ++ HV++ S + R+I + + L + ++ S+ Sbjct: 186 IADACSVAQFLAEEHVVVSRWHARKSLMSAEDIADLAKRKIAYRASGALEMLPVIHGSEY 245 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + ++P N F+ + ++ + P + + D ++ + + + ++ A Sbjct: 246 IGMLPESTINAFAGTYNIKAVSLP-FDHDVYDLCAIWHPSRSSESAHQWLRNQLKAA 301 >UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYN1_9GAMM Length = 303 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 130/300 (43%), Gaps = 8/300 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLLT+F+AV + AA+ + ++ A+S ++ + R I D LF R G+G+ Sbjct: 1 MNLRSVDLNLLTVFDAVITEGSVTRAAEKIGMSQPAMSIALTRFRHIAKDELFERTGRGL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 PT A+ L I + L+ + AL+ +D R+ ++ + ++LP + R ++ Sbjct: 61 RPTPRALELAAPIRRALDIVTDALEHGTDFDMSRSDRSFSVVLSGIGEIVMLPTLMRRLE 120 Query: 141 THYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + ++ + R+ D ++ DL + + + + + + V + R +P Sbjct: 121 STGSRININTRHVAHGDMLKEMHFGNVDLYMWIVPIESSEIICTQIGNTSEVCLVRADHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQ-NFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + HV S + + + + R+ + + ++ +++ + Sbjct: 181 YVGDSLSVNEFAALRHVTFHMPGTYGPSIIDRELWRLGLKREHSMSVHSYFDAPRVLSQT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 DM+ +P F+R L+ + P E + + K + +D + + + + F Sbjct: 241 DMVCTMPRVLGRHFARVHGLKMVRSPLQLE--FPVFMLWPKAAEKDKGHQWLRETLIDIF 298 >UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RWU1_ALTMD Length = 347 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 116/282 (41%), Gaps = 5/282 (1%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY 95 IF+A+ I AA L++T A+S ++ ++R + D LF++ G+G+ PT+FA +L Sbjct: 2 IFDAIMTEGAITRAADRLSMTQPAVSNALSRMRTAWNDELFVKDGRGIQPTSFAKNLWSQ 61 Query: 96 ISQGLESILGALDIEG--SYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPI 153 I L + A++ +RT IA T ++ ++V + + I+ P + + P Sbjct: 62 IQGPLGELEVAVNPTDFNPASAKRTFRIAATDNIVSMVWGPLRKVIENEAPGINIHAIPN 121 Query: 154 SDAENQ--LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDN 211 D E L + +L ++ + + V++ R +PL + E Sbjct: 122 YDMETDKILKDAEAELTFSKYQEPGSVIRAEHVLDPSWVVVMRPDHPLAKSQLSLEDFVA 181 Query: 212 AAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLF 271 A H+L+ Q + + R++ + L+ S+++ + PS Sbjct: 182 ADHLLVSVTGDVSGPTDQVLANLGLRRRVAMSVNQFHNATPLLKESNLICVAPSLVMEKE 241 Query: 272 SRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 L P + S+ ++K +D L + ++ Sbjct: 242 IFSGELAVFETP-IEIVSSPLSVMWHKRQDQDAGLQWLRGLV 282 >UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7M9_BURCJ Length = 299 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 116/296 (39%), Gaps = 11/296 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR--KGQGV 83 ++ D+ LL + + + AA+ L ++ A+S + +LR + DPL + +G+G+ Sbjct: 1 MKKHDMGLLVSLDVLLEEANVTRAARRLAISQPALSAQLARLRQVLDDPLLVPAERGRGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L + + L + ++ ++D +R TIA + + + I+ Sbjct: 61 RLTPRAAQLKSPLHELLTRLEDLVEAPYAFDPSTAKRDFTIALNDNAAMTIGLDLIECIR 120 Query: 141 THY---PQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 +L + P + + ++ + DL+I ++ H L D + R+G+ Sbjct: 121 KQSYAGIRLAMLQIPRDEVLDLAARGRIDLVIGTRAFMPPGLRTHDLVYDRFQVAQRKGH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P + E HVL+ SG+ + E+ R + + ++ + Sbjct: 181 PRGTAAMTLEQYCAYEHVLVSTNGSYHSGIDDFLAELGHYRHTTVSVQYYTAVPPILERT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + LA +P RF + F LPF + + ++ D + + + Sbjct: 241 NCLATLPERFLHRFDHMIDRFDLPFAF---DPFQLQVGWHPRFDEDLGHQWLREQL 293 >UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3H6_9ENTR Length = 303 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 72/302 (23%), Positives = 125/302 (41%), Gaps = 14/302 (4%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + IDL L +F+A+ + + AA + LT A+S + KLR F D LF+R QG Sbjct: 1 MNGITRIDLKQLRVFKALLKERNVTRAAAQMGLTQQAVSAQLSKLRDTFQDHLFLRSAQG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + PT A L ++ ESI AL +D T I+ T A++LP + + Sbjct: 61 LIPTPLAEQLEPRVNTVFESI-AALSPPDRFDPAEVYTTFVISATDYAVAVILPRLMAKV 119 Query: 140 KTHYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 +T P L L R+ L+ DL + Q LF+++ + + R + Sbjct: 120 RTQAPGLKLIIRDFESDRLYPLLTSGDLDLALTFPAFVPDGCQTKWLFSEHHICVTRSDS 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNF-SGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 P+ + + I + +++ P N R I + + A +A+ Sbjct: 180 PMQNQQFTISDIADLPQIIVSPTRANLIGSADDWFASKGYSRNIVMSVPSFAAAPACIAS 239 Query: 257 SDMLAIIPSRFY-NLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +D +A +PSR N R L+ P D ++ S +DP+ ++ +++ Sbjct: 240 TDCIAFLPSRILPNPLVRPIQLDDSP------PSFDVIAAWHLRSNQDPLHKWILSLLQQ 293 Query: 316 AF 317 F Sbjct: 294 EF 295 >UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C385_DELAS Length = 332 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 65/309 (21%), Positives = 134/309 (43%), Gaps = 8/309 (2%) Query: 14 KSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPD 73 + ++G P+ LR+IDLNLL IFEA+ + + AA L +T SA+S ++++LR F D Sbjct: 5 QHADGAPRAPVNLRSIDLNLLVIFEALVEERSVGKAAARLGITSSAVSHALRRLRTQFND 64 Query: 74 PLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGAL 130 PL +R +G++PT A+ L + I A+++ +D +R + + VG L Sbjct: 65 PLLLRTAEGMSPTPEAVRLARSFRKAFSEIESAIEVSKGFDPATARRNFHLRLSDYVGVL 124 Query: 131 VLPVIYRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDN 188 +LP + ++ P + L +++ ++ + + L D Sbjct: 125 LLPQLCIHLRAVAPGISLSVQSFDGRQPSDRVEYEGVEIRLSVSRGRSVLSASRRLLDDQ 184 Query: 189 MVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNIL 248 +++ R+ +P + E H+ + S + + + E R++ F L Sbjct: 185 WMVLMRKDHPAAASPLTLEKYLEQGHLKVT--GVGSSIVDELLAERGLARRVMFQVPTWL 242 Query: 249 TIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHG 308 + ++ ++D++A +P+ + + P P L E + ++ + D Sbjct: 243 GMVPVIESTDLVAAMPAHWMHSVLSGSNCVARPMP-LPELALSIDAVWHPRNDHDAGHKW 301 Query: 309 VIDVIRNAF 317 ++I F Sbjct: 302 FRELIHQIF 310 >UniRef50_A3YI62 Transcriptional regulator, LysR family protein n=2 Tax=Oceanospirillaceae RepID=A3YI62_9GAMM Length = 305 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 125/302 (41%), Gaps = 9/302 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + LR DLNLL IFEA+ + AA+ + L+ SA+S ++ +LR DPL ++ G Sbjct: 1 MSVLRQFDLNLLIIFEALISECHVSRAAEKVFLSQSAMSHALNRLRTQLDDPLLVKTENG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAI 139 +TPT A+ + + Q L + + S+ RT IA+T +V P + + Sbjct: 61 LTPTPRALAMLPDVRQALNLVERTISPAESFQASLSDRTFRIASTDYFETVVFPEWFSQL 120 Query: 140 KTHYPQLLLRNPPISD--AENQLSQFQTDLIIDN--MFCTNRTVQHHVLFTDNMVLICRE 195 + P + + IS+ A +L + + DLI+ + T+ V + Sbjct: 121 QLSAPNVRVEIDLISEESALLRLEKGEIDLIVGMDKEQKLPSHLIVQDWLTEKQVCLASI 180 Query: 196 GNPLLSLEDDRETIDNAAHV-LLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 N E H+ E + S + + + R ++ N + A +V Sbjct: 181 QNQNARGSLSLEAYLALPHIRFFDLEGKTDSNVDRWLASQTLARNHIASTTNYMAAARIV 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 AN++ + +P LF++ P+ + P ID ++ + +D + + V+ Sbjct: 241 ANTEAIITLPYHMAKLFTQMMPVSIV-TPPDGLPAIDMTLVQHPLYAKDSGIIWLKQVLC 299 Query: 315 NA 316 Sbjct: 300 EH 301 >UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q081K6_SHEFN Length = 326 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 73/299 (24%), Positives = 132/299 (44%), Gaps = 11/299 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 ++ +DLNLL IFEA+Y + + A+K L +TPSA+S +I++LR++ DPLF+R+G + Sbjct: 23 KAIQQLDLNLLKIFEALYSEQNMTLASKSLFITPSAVSHAIKRLRLVLNDPLFVRQGLQM 82 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PTA + + L I L G +D ++T IA ++ + ++P + + + Sbjct: 83 QPTAACQRMAPQLISALNRIRQVLQQCGEFDPLTTEQTFKIAIHEALESQIMPTLIKQVV 142 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC-REGN 197 P + + +S + QL+ + DL ID N + H L +D ++ R + Sbjct: 143 KLIPHAKIASMSLSRENIARQLANGEVDLAIDVARAVNAPLAHKTLLSDPFCVLIDRRQH 202 Query: 198 PLL---SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 + S + NA HV + +Q+ +R I + + T A +V Sbjct: 203 AMHLEPSTKLTPTDYANAEHVAVSSRPIGRVMEDILLQQQGVNRHIKYRCQSYQTAAKIV 262 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 S ++ +P F L P ID ++++ + DP + I Sbjct: 263 IGSPLMLTLPRSIAEQFIHP-DLHVCTMP-FELPDIDTHLYWHMNTETDPAFVWLRAQI 319 >UniRef50_B3YF82 Transcriptional regulator, LysR family n=2 Tax=Salmonella enterica subsp. enterica serovar Kentucky RepID=B3YF82_SALET Length = 306 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 115/281 (40%), Gaps = 7/281 (2%) Query: 39 AVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQ 98 + + + + ++L+ SA S ++ +LR F D L ++ GQ + T FA L E + Sbjct: 16 VLLAERNVTRTGERVHLSQSATSGALSRLREFFDDQLLVQVGQRMELTPFAEMLVEEVHD 75 Query: 99 GLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISD 155 + +D +D + RT + + + +V+ I+ P + L I D Sbjct: 76 IISKCEAIVDKNQKFDPETSTRTFRLNISDASATVVMNNAITLIQKQAPHVRLDISSIID 135 Query: 156 --AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAA 213 L+ DLI+ + LF D V + GNPL + + ++ Sbjct: 136 GPISEYLNIGVIDLIVTPTNLVSSQHPAEYLFDDQYVCVVWSGNPLCQSGINLDNYLSSG 195 Query: 214 HVLLLPEEQNFSGLRQ-RVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFS 272 H++ + L + + + R+I+ + + + ++++A + RF +S Sbjct: 196 HIVARFSKMIGWALDEVFISQSGYQRRIDIIVPSFSMLMTQLIGTNLIATVHERFARYYS 255 Query: 273 RCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + P+E P P ++E D + +++ D + + ++ Sbjct: 256 KYLPVEIFPCPIISEP-FDMKLQWHRHHDGDLGIQWLRQIL 295 >UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=Vibrionales RepID=B7VQ63_VIBSL Length = 304 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 123/298 (41%), Gaps = 5/298 (1%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + + +DLNLL++F VY K I A++ L +T +S ++++L+ LFIR+G+G Sbjct: 1 MSDMEKLDLNLLSVFLEVYRLKSITLASESLGMTQPGVSGALKRLQAQLGTDLFIREGRG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT--ITIATTPSVGALVLPVIYRAIK 140 +TPT AM L + L+ I A+ +D Q+ I + P++ + Sbjct: 61 ITPTNAAMQLALRVEPALDGITSAVSTLKQFDNQQHHVFRILVNEIGLTKLQPLVEKDDT 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + P D LS Q DL ID + + + D +VLI ++G+P Sbjct: 121 LGNISIEFNMVPSNEEDLLQSLSMQQADLAIDIHYPQVNGYMNQQVIEDELVLIAKKGHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + H+ + + R+++ +++T+ LV+ SD Sbjct: 181 RIDGSVTEAQYYHEKHITFRMRRSHLYTADYFTKNPIQQRKVSSECDSLMTMCVLVSGSD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + F N F+ + L+ L P + + ++K + + + I+ Sbjct: 241 CVGSTSRGFANQFAERFQLQVLEQP-FEVLPMKQYMIWHKRTDLNTAHQWLRTKIQQH 297 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 13/300 (4%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +L DLNLL + +A+ K + AA+ L +T A+S S+ +LR IF DPL +R G+ + Sbjct: 4 SLTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGREME 63 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKT 141 T A L + + L + AL E S+D T IA T +LP I R + Sbjct: 64 LTVRARALAGPVREALLMVKAALGSEESFDPAETKCEFRIAMTDYCSMTILPRIVRELSA 123 Query: 142 HYPQLLLRNPPISD-AENQLSQFQTDLIIDNMFCT-------NRTVQHHVLFTDNMVLIC 193 P + L + + + ++L + D ++ + T ++ F D + Sbjct: 124 RAPGIELAVEGLVNKSFDRLETGEIDFLLTVVERTLLMHSRHPDMLRGADAFEDCYTCVV 183 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 +P E + + E F+ R + D+ + + ++ Sbjct: 184 AADHP-FDGALTPEDFRAYPNATVSFGENTFTTDRAAYEHGGLDQSPALIAPSFSSLLFQ 242 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + + ++ +P+R +F+ + L P + + ++++ S DP + ++I Sbjct: 243 LQGTTLIGTVPNRLAEMFAPMLGVRLLE-PPIRLPTLTERLNWHVRSDADPGHSWMRNLI 301 >UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K8D7_AZOSB Length = 298 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 131/299 (43%), Gaps = 11/299 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 ++++DLNLL IFEAVY+ + + AA L LT ++S + +LR++F DPLF+R GV Sbjct: 1 MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGV 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 PT A + + Q L + LD ++ RT + + + LP + RA+ Sbjct: 61 EPTVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALL 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + + + L Q DL I + ++ + L D +I + Sbjct: 121 ERAPGVRIETRQLGGVELAAALDSGQIDLAIGYLPVLDQGFECRHLLADEYAVIAPR-HL 179 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + S + + + Q + ++E ++ + + + A++A + Sbjct: 180 IPSGGKGDNAFNGLDFIAVTSHPQTLAI----LRECGLLDRVKLWVPHFMVVPAILAERN 235 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 A+ P + FS + P P+L + +D ++++N+ DP + +++ + F Sbjct: 236 FAAVAPREVVHAFSPRSRVRSFPLPAL-QRGMDVNLYWNRRYTGDPGHAWMRELVADLF 293 >UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q399F7_BURS3 Length = 313 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 110/293 (37%), Gaps = 9/293 (3%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 ID +LL I + + A++L + IS ++++LR I DPL +R G + PT+ Sbjct: 6 IDAHLLKILHTLITESSVSRTAELLGQSQPTISVALRRLRAITGDPLLVRSGSRMVPTSH 65 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 AM L E + Q L I L+ ++D RT I + + LP I A K P Sbjct: 66 AMTLVEPLDQALAGIAAVLNPASTFDPATTHRTFRIGSPDYLDVFFLPAIVDAFKHEAPG 125 Query: 146 LLLRNPPISDA----ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 + + E+ L DL + N + + L D++V + R+ + + Sbjct: 126 ARIEFQHLMTVDGGYEHALESGSLDLAVGNWSTPPQQLHLQPLCRDDLVCVMRDDHRIRR 185 Query: 202 LEDDRETIDNAAHVLL-LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + + A H+ + + + + R + T ++ S++L Sbjct: 186 GQLTADVYREADHLGVTTHHATGLGTIDRELARGGLSRNVTTTMPYFGMAPYVLMRSNLL 245 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 F PL P P + + + ++ + R + ++ Sbjct: 246 FTTTRTLATHFCSLLPLRIEPIPC-EPQALTYYQLWHDRTHRSAAAVWLRRLV 297 >UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=Vibrio RepID=A6ARN3_VIBHA Length = 305 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 6/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 RNIDLNLL F +Y ++ + AA+ ++ SA+S S+ +LRV+F DPLF RKG + Sbjct: 6 QWRNIDLNLLVTFSYLYRYRSVSLAAEKSFVSQSAMSHSLSRLRVLFDDPLFERKGHKMA 65 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKT 141 PT A ++ + L+SI L + ++ + I T + P++Y I+ Sbjct: 66 PTEHAHYIAPTVHHLLDSIAKDLLTKSAFLPENYAGVCRIGLTDYAEFIFAPLLYDEIRK 125 Query: 142 HYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P Q+ N S+ + D+II +M + + L+T+ V +C + Sbjct: 126 RAPEAQISFINVNRSNYVAITEHDKLDVIIGSMPVLDDNFESQYLYTEKHVCLCDKRVLK 185 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + N L+ P+ + + +++ E R++ S N LTI L+ ++ Sbjct: 186 GETQLSIHAFANIEQALVSPDGSLSTQVDKKLAEHGLSRKVTVASRNFLTIRNLLKQREL 245 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +AI+P + L + P + D ++ ++ + + ++ Sbjct: 246 VAIVPEKMAQAEGFSDDLVSVQ-PPIAVADFDIAMLWHTSRNNEDKGIWLRQLVAEL 301 >UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IJ97_AZOC5 Length = 324 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 116/299 (38%), Gaps = 8/299 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +R D LL +F + AA+ L LT S +S ++++LR + DPLF R+ G Sbjct: 5 LNHIRRFDGALLLVFRELMATGQTTAAARRLGLTQSTVSHALRRLRDLTGDPLFQRRPDG 64 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 +TPT A L + + L G +D R IA V ++ + Sbjct: 65 LTPTPRAHELLPIVVEMLRLSQALKGEPGEFDPAASTRHFRIAGPDIVSTVLAGPLAHRF 124 Query: 140 KTHYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 H P L I + A L + + D+ I + R L+ + V I R+G+ Sbjct: 125 AQHAPNARLSFGFIVGAAALEALRRGEIDMAIGHFPSVPRGFAASTLWEEEFVAIARKGH 184 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P D A HVL+ + + + +Q + R++ + L++ VA S Sbjct: 185 PRF-PPLDLAGYLAADHVLVSFSGRFTGVVDRVLQPLGLARRVVASFPLFLSVFDAVAQS 243 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 D +A +P + + L +LP P + + + D + +IR Sbjct: 244 DAVAAVPYSLCERHAETFGLARLPMP-IAVPGFPIVSV-RRAGVPDGGYEWLEALIRRM 300 >UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B54141 Length = 298 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 11/295 (3%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL + +A+ + AA+ L +P+A+S+++ +LR DPL +R GQG+ PT Sbjct: 1 MDLNLLRVLDALLQENSVTRAAERLGTSPAAVSRTLARLRRTVGDPLLVRAGQGLVPTPR 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ L E + + L +D QRT T+ T + + + I PQ Sbjct: 61 AVELREEVGALIRGCDNVLRPGAGFDAVHLQRTFTVQATDLLLVGLAGSLTERIHAEAPQ 120 Query: 146 LLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + + P + + L Q D+ + + + ++ L +V I R G+PL Sbjct: 121 VDVVFLPEAVEGGPGLRQGLVDVELGVLGHLDPEIRTRRLTRMPLVGIARTGHPLFDGRI 180 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 D A H+ + + + + E+ R+ + + L ++D++A+ Sbjct: 181 DARRFAAADHIGISRLGKRLGPIDSALAELGLRRRTAVVVPSHTSAMMLARDTDLVAL-- 238 Query: 265 SRFYNLFSR---CWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + L P P L+ E +D + ++ + DP + + A Sbjct: 239 -SLADWIPDTIAAMGLRAFPVP-LDLEPLDLGMAWHPRNSADPGHRWFREHLAAA 291 >UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SSQ1_AERS4 Length = 322 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 70/307 (22%), Positives = 131/307 (42%), Gaps = 15/307 (4%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + L IDLNLL I + + + AA+ L+L+ SA+S+++ +LR F DPLF+R Sbjct: 1 MLLEQLGRIDLNLLIILQVLLEERNGSRAARRLHLSQSAVSKALGRLRETFDDPLFVRSA 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRA 138 G+ PTA A+ L + + L S+ + +R IA+ S L P+ Sbjct: 61 YGLEPTARALVLQQQLQPILLSLDNLIQPPDFDPASTEREFVIASMDSAFTLFAPLYLSE 120 Query: 139 IKTHYPQLLLRNPPISD-AENQLSQFQTDLIIDN----------MFCTNRTVQHHVLFTD 187 +K P + LR ++ + ++SQ Q D+ + + +L D Sbjct: 121 LKRQAPGIRLRYEEWTENSLTEMSQGQVDIAFTVRENCISSDFRLDTLPNAICQRLLAID 180 Query: 188 NMVLICREGNPLLSL-EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYN 246 ++ + + +P L E D HV E ++ L ++ M R+I T + Sbjct: 181 DLTCLVQHDHPALHEPEWDLARYLAYPHVQTYCEGRDRWMLDHKLAGMDLYRRIEATVPS 240 Query: 247 ILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPIL 306 + +SDM+ + + ++ +PL LP P + + I + +++ DP Sbjct: 241 FEAALRMGMHSDMIVTLSRLYARHATQVYPLVPLPLP-IALDSISHLLIWHQRHEEDPGH 299 Query: 307 HGVIDVI 313 + + + Sbjct: 300 RWLRETL 306 >UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A0KG94_AERHH Length = 318 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 130/302 (43%), Gaps = 22/302 (7%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY 95 F+A+ + AA+ L ++ A+S ++ +LR F DPL +R QG+ PT A LH Sbjct: 14 AFDALMAQGSVTRAAETLFISQPAMSHALNRLRTFFGDPLLVRTPQGMLPTPRAQRLHLG 73 Query: 96 ISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPP 152 + Q L + L E ++ +R + TT V +++P + + +K P + + Sbjct: 74 VQQALRLLEQQLSDEEVFEPSQSKRRFVLCTTDYVECVLIPPLIQRLKRLAPAVTIEIRI 133 Query: 153 ISDA--ENQLSQFQTDLIIDN--MFCTNRTVQHHVLFTDNMVLICREGNPL--------- 199 + D E +L+ + DL++ + T+ + + R P+ Sbjct: 134 LRDTLPEAELASGEIDLVLGFDEYMQVPGYLGKETWLTEPLAGLVRADLPMAAPALAESG 193 Query: 200 -----LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 L+ + HV P + + L + ++ + R I+ S + ++ AA+V Sbjct: 194 DEPAILAERISLAQLIEMPHVFHSPLGTSEASLDRYLKTLGFSRTISVNSQSYMSAAAIV 253 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + SD L ++PS L + WPL+ LP P + + ++ + P L + D+++ Sbjct: 254 SQSDHLLVLPSMVAELLASHWPLKSLPLPE-DVPDYHLNCVWHPVHAQQPALVWLKDLMK 312 Query: 315 NA 316 Sbjct: 313 EL 314 >UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391Q9_BURS3 Length = 322 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 116/300 (38%), Gaps = 10/300 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 R +DLNLL +F A+ + AA+ L L+ SA+S ++++LR D LF + GV P Sbjct: 5 FRQLDLNLLRVFAALMAEGNVTRAAERLALSQSAVSNALRRLRESLGDVLFEKTVSGVRP 64 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 TA A L + +++ A+ +D Q T TIA + ++P + + H Sbjct: 65 TARARELWSAVQPHFDALKQAIS-PDQFDPQEHRGTFTIAMSDYSVERIMPRLAHFMGEH 123 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMF---CTNRTVQHHVLFTDNMVLICREGN 197 P + + P S D + DL I + V+ H ++ + + R+ + Sbjct: 124 APSMRIELTPFSVADLPAMFDRGGVDLAIGGYLNDSSPSSGVRTHEMWPIHWSCLMRKDH 183 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 PL + A H+ + + R + T A++ S Sbjct: 184 PLAKGPLTLKRFLAARHLDVGFSGMRVPVYDSLLSAHGLQRNLVLTLNAYSPALAIIRES 243 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 D + ++P+ +L L P + + + +++ P + I + F Sbjct: 244 DFIGVLPTTLLDLSIHEKELVSRQ-PPVRMPARPYCVIWHQRWDSHPAHRWLRQTIVSLF 302 >UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYP7_9DELT Length = 312 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 114/306 (37%), Gaps = 15/306 (4%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L +DLNLL F+ + + + AA L +T SA+S ++++LR + D L +R G+ Sbjct: 7 DELAQLDLNLLVAFDVLAEERSVTRAAARLGVTQSAMSHTLRRLRGVLEDELLVRTRGGM 66 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L + GL ++ AL +D +R + L LP + Sbjct: 67 ALTPRAAALVAPVRTGLTTLQRALADPEGFDPATSERHFRLTGPDLFELLYLPRLIAGFG 126 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLII------DNMFCTNRTVQHHVLFTDNMVLI 192 +L + ++ +QL + DL I + VL D Sbjct: 127 ASAGRLSVTLAHVAPRQLADQLETGELDLAITARMLDGREQPAQPGLMRRVLLRDGWRCF 186 Query: 193 CREGNPLLS--LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTI 250 R G+P L+ A+HV++ P + + + E R + + T Sbjct: 187 VRAGHPALTKRGRLSLPRFLAASHVMVSPTGRGQGIVDVVLAEQDEQRTVAVRVSSFATA 246 Query: 251 AALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVI 310 + A+SD++ P+ L + P L + + +++ DP + Sbjct: 247 PVVAASSDLILTAPASL-EAVVGHLGLVCVA-PPLPLPEHSVDMTWHQRLSEDPGHQWLR 304 Query: 311 DVIRNA 316 + + A Sbjct: 305 EQLVAA 310 >UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJC2_9BACT Length = 303 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 126/300 (42%), Gaps = 11/300 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + + DLNL I ++Y + AA+V+ +T A+S ++ +LR F D LF+R G G+ Sbjct: 1 MKISSFDLNLFVIMNSIYTEGSLTKAAEVVGITQPAVSNALSRLREKFDDELFVRTGSGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT ++ + I L+ + +++ ++ +RT I+ +L ++ I Sbjct: 61 VPTQKTENIIQDIQNALQLMQKSVNEPDEFNPKTSERTFRISLGDINEGRILAILMSKIG 120 Query: 141 THYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + + + L+ + +D ++ +F+D V+ R + Sbjct: 121 KSAPHVKIESYYSARDQVPHALATNELSFAVDPFIPNSKDTNSMKVFSDKFVVAHRANHD 180 Query: 199 LLSLE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + +E + E + ++ + ++ S + +Q+M ++ + + L +V +S Sbjct: 181 VSKIENLNLEEMLKLKYINISNRKRGASVVEMEMQKMQLQPEMALRAQHYLVTPEIVRSS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 D+ + F++ L + P ++ + ++ D + ++I +F Sbjct: 241 DLCLLC----AETFAKKHGLSYVELP-FKVPALEQYLIWHNSDDNDGSHIWMRNLIAESF 295 >UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteobacteria RepID=Q7MQI2_VIBVY Length = 321 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 8/291 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL + + AA LNL+ SA+S+ + +LR + DPLF R+GQ + PT A Sbjct: 18 DLNLLVALRVLIEESSVSKAAVRLNLSQSAMSRVLGRLRDLLGDPLFTREGQHLLPTEKA 77 Query: 90 MHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQL 146 + + + + LES+ L +D +T TIATT +LP I P + Sbjct: 78 LEIDRALGEPLESLRQLLS-PSEFDPHLCTQTFTIATTDYAMQTILPFALPRIYQEAPNV 136 Query: 147 LLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 P+ +QL+ DL I ++ VL ++ + + +PL E Sbjct: 137 SFHFLPLQHDRLADQLTYEGADLAICRPTGPVEPLRSEVLGRVGVLCLLSKQHPLAGKEM 196 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 H ++ + + + Q + + P R++ +Y++ A+V ++ +P Sbjct: 197 SLADYLYYPHAMIAISDGVKALIEQALVDQ-PQRKMVLRAYHLEAALAIVDTMPLIITVP 255 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + L + + L P D+S+ ++ P + V+R Sbjct: 256 ADLAYLVAERYDLVVKALP-FQFTPFDYSMIWHPRCEHSPAQEWLRSVVRE 305 >UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=A6VSJ2_MARMS Length = 328 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 128/300 (42%), Gaps = 8/300 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR IDLNLL A+ V K + AA+ L+ + AIS ++ LR IF DPL +R+ Sbjct: 20 MNNLRRIDLNLLVTLHALLVEKHVSRAAQRLHKSQPAISHALANLRAIFNDPLLVRRTGK 79 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + T+ A L +++ L + GAL + +++ +R +A + +VLP + + + Sbjct: 80 LELTSRANELLPTLTEALHQL-GALIEQPTFESTQAKRVFRLAMSDYGSRVVLPGLIQIL 138 Query: 140 KTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNM-FCTNRTVQHHVLFTDNMVLICREG 196 ++ P + L+ + + + D+ + + H LF ++ + + Sbjct: 139 RSRAPGIDLQVIQGSRTSMLTGVYDGEIDMAFGVFNSPLSDELHTHTLFIEHFICAADKN 198 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 + ++ + H+L+ + + + + R+I T + + +VAN Sbjct: 199 TLPKTGSLEKTQWLSRPHILVAMQTNESNEIENALHREGVSRRIAMTLPHWGVASHMVAN 258 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +D++ R ++LF PL+ P + FS+ ++ D + + I Sbjct: 259 TDLILTAARRSFDLFLEDSPLQLF-TPPYPIDPFKFSMVWHSRRESDAGHNWLRHTIIEM 317 >UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAE3_OLICO Length = 311 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 119/303 (39%), Gaps = 11/303 (3%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L +DLNLL +F+A+ + AA L+L+ A+S ++ +LR + DPLF+R Sbjct: 9 MHQKNLARLDLNLLVVFDAIASARSTTLAATQLSLSQPAVSHALSRLRRLIGDPLFVRGR 68 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 T A + + L ++ G + +D +RT IA + ++P + R Sbjct: 69 GRFVLTPRAEGMVLQVRDILNAV-GVVLANAPFDPAENERTFRIAASDYTMLTIMPTLVR 127 Query: 138 AIKTHYPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 + P+ L + S QL D + LF ++ Sbjct: 128 TLHRASPRAKLEVFSVGSQTIAQLESNDLDCTFWALKPPGAPYVTMPLFRESSKGFLDRR 187 Query: 197 NPLLS----LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 +PL + HV+ + N S + + + R I S + + Sbjct: 188 HPLAKPANRGRLTLDDYVGYPHVIAKFRDSNPSPVDVALAAVGRKRTIGLASSSFIGNIT 247 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 ++ ++++A +PSR + + + L+ P + E +S+ +++ + DP + V Sbjct: 248 ALSGTNLIATLPSRLSS-IAESYGLKSFDLP-IRIEDYTYSLVWHQRTDADPACIWLRKV 305 Query: 313 IRN 315 I Sbjct: 306 IAQ 308 >UniRef50_P46924 Probable HTH-type transcriptional regulator leuO n=122 Tax=Gammaproteobacteria RepID=LEUO_SALTY Length = 314 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 130/294 (44%), Gaps = 6/294 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR +DLNLLT+F+AV + I AA L ++ A+S ++ +L+V+F D LF+R G+G+ Sbjct: 17 PQLRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPAVSNAVARLKVMFNDELFVRYGRGI 76 Query: 84 TPTAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIATTPSVGALVLPVIYRAIKT 141 PTA A L + Q L+ + L +R + + ++ IY ++ Sbjct: 77 QPTARAFQLFGSVRQALQLVQNELPGSGFEPTSSERVFNLCVCSPLDNILTSQIYNRVEK 136 Query: 142 HYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P ++ + + E+QL +T+ +I LF D MVL+ +P Sbjct: 137 IAPNIHVVFKASLNQNTEHQLRYQETEFVISYEEFRRPEFTSVPLFKDEMVLVASRKHPR 196 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 +S + N H ++ ++ S + + + ++++ +V+ + + Sbjct: 197 ISGPLLEGDVYNEQHAVVSL-DRYASFSQPWYDTPDKQSSVAYQGMALISVLNVVSQTHL 255 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +AI P F+ L+ LP P L + +++ + RD + D++ Sbjct: 256 VAIAPRWLAEEFAESLDLQILPLP-LKLNSRTCYLSWHEAAGRDKGHQWMEDLL 308 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 116/290 (40%), Gaps = 5/290 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR +DLNLL + +A+ + AA+ L ++ A+S+++ +LR+++ DPL IR QG+ Sbjct: 1 MNLRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 PTA A L + + L I D + + I V +++P + ++ Sbjct: 61 EPTARAEALLLPLREILHDIEQTFSPPEQLDPAQFEGVLRIGAHTYVEYVMMPSLLARLQ 120 Query: 141 THYPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P L + P+ +D E+QL + ++I + LF D ++ +PL Sbjct: 121 QQAPNLRIHMVPLNADYESQLDEGVISMVISKQDEVPGRFRRIPLFEDKLICAAHRSHPL 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 E+ A H+L+ P + + R + L ++ + + Sbjct: 181 QGQVLCIESFAQAQHLLVAPRGSEGGIVDDLLAAHGMTRHTPLIVQSFLAAPFILPCAPL 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 L P+R L + + S+ ++ + +L+ Sbjct: 241 LLTSPARVLRPLMPLLDLVEYET-RFALPTFEVSLIRHRRDDNNAMLNWF 289 >UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0RZK6_ACICA Length = 303 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 133/299 (44%), Gaps = 12/299 (4%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 DLNLL +F A+Y HK + AA+ L ++PSA S ++ +LR DPLF+R + PT Sbjct: 9 HGFDLNLLLVFNALYQHKNVAKAAETLFISPSAFSHALNRLRDTLQDPLFVRMNGEMKPT 68 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHY 143 + + IS L ++ L +D IA T V+P++ + ++T Sbjct: 69 KKSEEIAPSISNCLSTLSQNLFKNSDFDYATSDYEFVIAATEYTAFSVMPLLVKHLRTIA 128 Query: 144 PQLLLRNPPISD--AENQLSQFQTDLIIDN---MFCTNRTVQHHVLFTDNMVLICREGNP 198 P + ++ + + ++L + D +I + ++ F D V+I + Sbjct: 129 PNIKIKIISENKQCSIDELMLGKIDFVIGYSELSEGSPNHLEVFQCFADRYVVIAPKN-- 186 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + E+ +A H+ + +++ + Q +++M RQI +++ ++ +++ Sbjct: 187 -IYQSMNLESFISAQHIRVSSWNEHYGVIDQSLKKMGIRRQICVEVPHVMLAPYMMQSAE 245 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 ++ +P + + + ++ P + + +++ + S ++D I + F Sbjct: 246 LIVTLPLKAVDAIKKNHEIDIFELP-FSVPEYQVNVYSVEKSKLKACQIWLVDEILSLF 303 >UniRef50_A3VA58 Transcriptional regulatory protein n=2 Tax=cellular organisms RepID=A3VA58_9RHOB Length = 310 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 122/293 (41%), Gaps = 5/293 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL + + H+ + AA + ++ SA+S ++ +LR F DPL ++ G+ + Sbjct: 1 MRFKKLDLNLLVALDHMLEHRSVTEAAGRMFMSQSAMSNALTRLRTYFDDPLLVQVGRRM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L I L + A+D ++ RT + + +++P ++R Sbjct: 61 ELTPRAEALRPAIRDVLVRVEAAIDRGPQFEPDQSDRTFNLLLSDYSLRVLMPTMFRLAD 120 Query: 141 THYPQLLLRNPPISDAE-NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 + A NQ+ + + DL+I + +L+ D V++ Sbjct: 121 DQNATVRFNLRAQEIAPYNQIERGEVDLLIAPEPFVSPDHPSTLLYEDRYVVVAWAKGKY 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + D + A HV+++P +Q + + + R++ T+++ ++ L+ ++ Sbjct: 181 GTGPMDSRAYEAAGHVVMVPPQQAQTVDGRLIAGGGLTRRVEATTFSFASLPYLITGTNR 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 +A + R L L P + + I ++ DP L + D+ Sbjct: 241 IATVHGRLAALMMNEADLVSYSLP-VEAPPLRQMIQWHMLRDGDPGLSWLRDL 292 >UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM2_9RHOB Length = 313 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 122/303 (40%), Gaps = 11/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L DLNLL + +A+ + AA + L+ A+S ++ +LR D LF+R+GQG+ Sbjct: 1 MNLAGFDLNLLKVLDALLRERSTTRAAARVGLSQPAVSAALGRLRAALGDELFLRRGQGL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T FA L + + L+ + L +D +RT +A +++P + + Sbjct: 61 VATDFARALEAPLRETLDRLEDLLAAPQEFDPATAKRTFRLAGIDFFAEMLMPQLAARLA 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + ++ + + E L +++ D+ + + + +H +LF VL GNP Sbjct: 121 AAAPGVRIQLLNLVPREYEATLERYEADVALFPLTGSPEWAEHRLLFRSPFVLAAAAGNP 180 Query: 199 LL-----SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 L + + H+L + + + + R++ + + I Sbjct: 181 RLAHLAEGDTVPLDLFCDLGHILFSLDGNLRAMGDDALAAVGRQRRVVMSMASFPGILRA 240 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 VA S+ ++++P + L P E + + +++ S P + + I Sbjct: 241 VAGSEAVSLVPVQLARKLQGEMGLRCFALPMPLEPPV-IGMMWHRRSSATPAHAWLREQI 299 Query: 314 RNA 316 Sbjct: 300 VEL 302 >UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GFT2_SILST Length = 299 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 6/291 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 +D++LL +F AV + + AA+ L + S +S ++ +LR D LF+R GV PT Sbjct: 2 TVDISLLRVFHAVMEERNVTAAARRLGQSQSTVSAALARLRDALGDELFLRARYGVEPTE 61 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTHYP 144 A+ + I+ GL+ + A +D R+ + P ++ P + A H P Sbjct: 62 KALQIAPDIAAGLDRLEQAFRAAEPFDPIRSTRRFRLLLGPYAEVVLAPDLAEAFAQHAP 121 Query: 145 QLLLRNPPISDAEN--QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + L PI + +L+ DL I + LF+D I Sbjct: 122 KAQLELAPIGPDLDPRKLAAQSFDLAIGRFAPPPDDLVVSDLFSDGFRCIVAPAALPEGA 181 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 D + + HV++ P + +G+ + R + LT A VA + +A Sbjct: 182 SLDLDLYETLPHVIVAPPGRWRTGVHKLTAASGLQRNTAVAVSHFLTAAPTVARINGIAT 241 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +P+R + + + L + P + I ++ RDP + D++ Sbjct: 242 VPARIAAMVAAPYGLRNVAVPR-DLGTFPTQIAWHPHQRRDPRHVWLRDLL 291 >UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J7P4_PSEPW Length = 314 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 119/295 (40%), Gaps = 7/295 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 T ++ L L + + K + +AA+ L ++ SA+S+ + LR F DPL +R+G+G Sbjct: 3 PTFASLSLAHLRTLDCLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGRGY 62 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 + + L E + Q LE + AL ++D +R +A + V +LP++ A++ Sbjct: 63 VLSEYGQALVEPLRQVLEEL-QALRQPAAFDPARCERRFCLAASDYVAEHMLPLLVAALE 121 Query: 141 THYPQLLLRNPPISDAE-NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + + + L+ + DL + + +L D V + R +PL Sbjct: 122 QEAPGVSIDYRTWQAGQYALLASGEIDLATTLFDESPANLHGRLLGEDRAVCLMRRDHPL 181 Query: 200 LSLE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E ++ HV + S + + ++ R+I+ +V NS Sbjct: 182 TACEVLSQDDYLAFKHVRISGGGDKDSFIDRHLRTQGLQRRISLEVPFFSATVQVVGNSQ 241 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 LA +P R L P + Q + + +++ + + + Sbjct: 242 ALATVPEHIARQLCRLHGLAWRPLGFVEHTQ-RYWVVWHQRLQASAEHRWLRNRV 295 >UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=Betaproteobacteria RepID=Q0K3U9_RALEH Length = 311 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 60/290 (20%), Positives = 108/290 (37%), Gaps = 8/290 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 R +DLNL+ + + + AA L+L A+S ++ +LR +F DPL +R G+ P Sbjct: 8 FRGVDLNLMVTLTVLLRERSVSRAAARLHLGQPAVSGALARLREMFDDPLLVRTAHGMEP 67 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L + L I AL +D RT + V + P I ++ T Sbjct: 68 TERALELERRLLPALGEIEAALLQRRDFDPLTSDRTFVVGMPDWVELWLAPRILPSLSTC 127 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L P L + + DL I + T + PL Sbjct: 128 APGVRLAIVPTDPFRGTEMLERNEMDLGIGPFAKGAAWRRERAWQTMGFRCVYGAA-PLD 186 Query: 201 SLE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + + + HVL+ S + R + ++S ++ A++ + Sbjct: 187 ACQILSLQDYLRFPHVLVSYRGAFDSTADTWLATQGQARDVRYSSARFASVPAILKGTAA 246 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 LA +P+ + + L +LP P + + ++ D L + Sbjct: 247 LATVPAVLADQWCATEGLRQLPCP-VPMPDFTVTAVWSAARDNDAGLMWL 295 >UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8IVY8_METNO Length = 341 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 132/323 (40%), Gaps = 26/323 (8%) Query: 16 SEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPL 75 + G + L +DLNL+ +F+AV + + A + L L+ SA+S +++LR + D L Sbjct: 2 TRGAGTRASILNRLDLNLIRLFDAVMRERHVARAGQSLGLSQSAVSHGLRRLRTLIGDDL 61 Query: 76 FIRKGQGVTPTAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIATTPSVGALVLP 133 F+R QG+ PT A+ + + L +I GA+ R +A T + A+V P Sbjct: 62 FVRTVQGMEPTPRALAMAVQVRDALTAIEGAIGPQRFDPASSTRQFRLAATDHITAVVAP 121 Query: 134 VIYRAIKTHYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVL 191 + R +T P +L+R D Q+ Q D+++ + LF D VL Sbjct: 122 ALMRTFETEAPLASILIRPATRIDLTMQVDLGQIDIVVGIFSQIPHRLHARTLFEDRDVL 181 Query: 192 ICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDR------------- 238 + +P D T+ +++ R+ E R Sbjct: 182 VTAPDHPEAGGATDIRTLARDPLMVVTVGGTEDGLPDGRLSERGLTRQTEMFDRDALNRA 241 Query: 239 --------QINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQI 290 +++ + L + +L+A+S +AI+P+ + F + ++ P + Sbjct: 242 FRAAGLVPRLSVLQPHFLAVPSLLADSRRVAIVPASLAHGF-EAAGVARVSMPPWEPRTM 300 Query: 291 DFSIHYNKFSLRDPILHGVIDVI 313 + +++ +DP + + + Sbjct: 301 AVQMVWHERWRQDPAHAWLREAL 323 >UniRef50_A6GE91 Probable transcription regulator protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GE91_9DELT Length = 305 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 119/298 (39%), Gaps = 6/298 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + +DLNLL A+ + + AA+ + ++ A+S ++++LR D L +R+G Sbjct: 1 MADIDALDLNLLKSLRALLDTRSVSRAAEAIGVSQPAMSAALRRLRAALGDELLLRQGHQ 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI 139 + PTA+A L E ++ L + AL +D T+ I TT V ++ ++ A+ Sbjct: 61 MIPTAYAESLVEPLTDALGQLEVALFQRAGFDASSWATTLFILTTDDVIEVLGGPLHDAL 120 Query: 140 KTHYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 P + L R + QL + L I + ++ L+ D V + R + Sbjct: 121 AELAPGVTLAFRTLTSDYGKGQLQRGDAHLAITVDWTAPPELKRVRLYDDRFVSLVRADH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 R A H+L+ P + + + + R I + + S Sbjct: 181 RFARRRPSRAAFARAEHLLVAPLGGTWGPVDDALADDGLGRAIRAVVPTFSSAPGYLVRS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +++ +P F + L+ P + + + + ++ RDP + ++R Sbjct: 241 ELVCTLPRHFARAVAGVHGLKLFETP-VALAPLRYDLFWHPRFDRDPGHVWLRGLLRE 297 >UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW61_ARTS2 Length = 295 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 8/296 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + ++DLNL+ F ++Y + + A + +T ++S ++ +LR DPLF R G+TP Sbjct: 1 MADLDLNLVKTFVSIYETRSLTQTAAEMCITQPSVSHALSRLRRQLGDPLFTRGAGGMTP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L L +I A+D +D RT + + LP + + + Sbjct: 61 TRVAVELFSTFKASLNAIDLAIDGTRDFDPTTSSRTFRLCLSDLGEMAFLPALMKRLLDS 120 Query: 143 YPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 PQ++L P I L+ D I ++ ++ V+ ++ V + +G L Sbjct: 121 APQIVLEVVPMQIDKVSEWLAHGAVDAAIASVP-IGGAIRSRVIDQEHYVCVLPDGAGGL 179 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + + HV++ P + + + +R I ++ + ++A ++ Sbjct: 180 AEKMTLSQFTGMRHVVIDPSAGHH-LAEAEIAALGIERNIALRLHHFSVLPLVLAGQNLA 238 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 AI+PSR +F+ PL P N D S+++N + R L + + ++ Sbjct: 239 AIVPSRVARMFTEQAPLTIRELP-FNVPSFDVSLYWNGTAPRSRALRWFHETVADS 293 >UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X2W7_COMTE Length = 302 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 108/276 (39%), Gaps = 7/276 (2%) Query: 43 HKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES 102 + I A + L+L+ A+S ++ +LR F D L +G+ + T A+ L E + + L Sbjct: 20 ERNISRAGERLHLSQPAMSNALARLRNFFGDELLASQGRQMVLTPRALGLIEPVREVLMR 79 Query: 103 ILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISD-AEN 158 I + +D RT + + A+ +P + A+ + L ++D Sbjct: 80 IDSTITTPPLFDPTESTRTFVLLLSDFTTAVFIPPLLEALYQQARGIGLELRSLNDKPAE 139 Query: 159 QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLL- 217 QL Q DL+I LF + + + + + E HV+ Sbjct: 140 QLEQGDADLLIIPEQFAAVDHPRAPLFEEQYLCVTWANHSRIREELTFNDYLECGHVVAN 199 Query: 218 LPEEQNFSGLRQR-VQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP 276 Q + + +R++ ++ ++ + +V +D +A + R + P Sbjct: 200 YATGQQRAAFDGWFLDRFGINRKVEVSAPSMAALPQMVVGTDRIATVHRRLALQAEKVLP 259 Query: 277 LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 ++ P P L + ++ +++ DP L + ++ Sbjct: 260 IKLWP-PPLEVPMLVQTLQWHRHRDADPALQWMREL 294 >UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=Rhizobiaceae RepID=C6B2W9_RHILS Length = 334 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 131/306 (42%), Gaps = 18/306 (5%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 L IDLNLL +FE V + + + + LNL+PSAIS + +LR++ DPLF++ +GV Sbjct: 6 DLSRIDLNLLVLFETVMEERHVGRSGQRLNLSPSAISHGLGRLRMLLGDPLFLKTPKGVV 65 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PT A L I+ L + + +D QR TI V ++ LP + + Sbjct: 66 PTDRAEELAAPIADILARVRSVVATAEPFDPAHSQRRFTIGAPDGVSSVFLPPLLDLLAK 125 Query: 142 HYPQLLLR-------------NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDN 188 P + + + DA L D+ I +L+ ++ Sbjct: 126 FAPGIAISVRQLLPKQGEPSPDLAWRDALAALEARDMDIAIIPQAGFPIRFASLLLYEED 185 Query: 189 MVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNIL 248 V+ R+ +P L ++ T A H+++ + + R++ T N + Sbjct: 186 FVIAARQCHPFL-IDQTLATYCAAQHLVVSHLGDTHGFVDNLLASHGCSRRVALTVPNFM 244 Query: 249 TIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHG 308 A++A +D ++ +P RF + + + + + P L + + K ++RD + Sbjct: 245 LALAVLAETDFISALPRRFVEMHAARFGVVSV-NPPLPLGRFAINATAPKAAIRDEGVAW 303 Query: 309 VIDVIR 314 ++ +++ Sbjct: 304 LVRLLQ 309 >UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibrionales RepID=B7VJC4_VIBSL Length = 308 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 124/297 (41%), Gaps = 5/297 (1%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 + IDLNLL +A+Y + AA+ ++ SA+S S+Q+LR +F DPLF R G + Sbjct: 5 NWKGIDLNLLIALQALYKTNSVSKAAERCYVSQSAMSHSLQRLRKLFDDPLFERVGSKME 64 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 T A+ L + L +I + + S+D + T I T + P ++ IK Sbjct: 65 ATDRAIELSSTVEALLNTIQSEVLLSKSFDAATYKGTWKIGLTDYAEQMFAPALFDLIKQ 124 Query: 142 HYPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P ++L N S+ + + D+ I + ++ + L+T+ V + + Sbjct: 125 SSPNSQVVLFNVNRSNYQQVFEDAKLDMAIGSFGEVSKQYRTTHLYTEQHVCLFDKSVVS 184 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + E H L+ P +G+ +R+ E+ R++ S N LT+ L+ ++ Sbjct: 185 IEGPISLEQFVAVEHALVSPAGSLKTGVDKRLAELGFSRKVAICSSNFLTVKRLIRGREL 244 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 L I+P + P ++ D + Y K D + + A Sbjct: 245 LCIVPKLVARNDIQDQDTVVAVEPPIDVPDFDIQLIYRKTKHLDDKNKLLRKLFTQA 301 >UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6I2_SPHWW Length = 301 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 71/295 (24%), Positives = 121/295 (41%), Gaps = 6/295 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL F+ + H+ + AA+ ++L+ SA+S ++ +LR F D L + +G+ + Sbjct: 1 MRFQGLDLNLLVAFDTLAEHRSVSLAAEAMHLSQSAMSAALARLRAYFDDELLVPRGRTL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L + L I + ++D +R TI + V A++L R Sbjct: 61 VLTPRAEQLAPEVRDTLLRIHATIAHPAAFDPIETKREFTIVASDYVQAVLLEPFMRKAA 120 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 H P + R PIS ++ + DLII LF D LIC +P Sbjct: 121 HHAPGMRFRILPISQQGIDEFKRGVIDLIIVADSVILPEHPSQKLFEDEAKLICSADHPT 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGL-RQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E E HV L + E R+I +A V ++ Sbjct: 181 IGDEISMEQFGTVGHVTTSLHHHRPGSLFDLMLLERSIARRIEIQVPAFSMMAGAVVGTE 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +AI+ +R ++R P++ L P I I ++ RD L +++ + Sbjct: 241 RVAILHARLATSYARILPIKLLSLP-FALPPIREVIQWHALRQRDRGLQWLLEAL 294 >UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT25_CHRVO Length = 310 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 116/290 (40%), Gaps = 7/290 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 ++LNLL EA+ + + +A L LT SA+S+ + +LR F DPL +R+GQ T Sbjct: 5 LNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTER 64 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L + LE + L +D +R + A + + +LP I + P Sbjct: 65 AEELRLGLKAVLEQVEQ-LYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPG 123 Query: 146 LLLRNPPISDAE-NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE- 203 + L+ P + LS DLI + L D + + + +PL Sbjct: 124 MRLKFIPWQAGRFDLLSDGAADLISTIADEVPDNIYGKSLGQDQPMCVMADNHPLHDKPA 183 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAII 263 +R+ H + + ++ RQI + ++ ++V+ S +L + Sbjct: 184 LERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIVSRSQLLLTL 243 Query: 264 PSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 P F R +P+ P P ++ + + ++ + +DP + Sbjct: 244 PEHLAVRFQRQFPVRAKPLPFID-YTYRYWLLWHGRADKDPAHRWFRGHV 292 >UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U796_MARAV Length = 303 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 8/294 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 + ++DL L F AV + AA L +T SA+S ++++LR F DPLF++ G+G+ Sbjct: 5 DMLSLDLRSLATFVAVLDEGSVSRAAVRLGVTQSAVSHTLERLRQAFGDPLFVKSGRGIV 64 Query: 85 PTAFAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAIKTH 142 PT +A+ +I Q L+ + + T TIA L+LP + R ++ Sbjct: 65 PTDYALRTGPHIRQLLDDLRTLPSGPPFEPASAEFTFTIAANDYQRDLLLPGLLRILRQQ 124 Query: 143 YPQLLLRNPPISDA-ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + L+ P + L + DLII + L D MV+ + Sbjct: 125 APGIRLQVIPSGIPNADMLRKEACDLIISPHAPETTDIMQRGLMADRMVVFYDPN--QRN 182 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 D A H+ L+ G + DR+ T N + + +DMLA Sbjct: 183 APTDLAEYLKADHIALMFATGERPGFENTLHAKGLDRRNVVTVANFSGLPEFLRGTDMLA 242 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 P R R + LPF + + + +++ DP V + + + Sbjct: 243 TAPERMSAQLMRDFAWVPLPF---DYKPFTLLMLWHRRHQNDPAHRWVRNQVNS 293 >UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3VWI6_9RHOB Length = 314 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 126/297 (42%), Gaps = 6/297 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 R DLNLL IF V + + + AA LN+T ++S +IQ+LR + D LFI+ G Sbjct: 1 MINRRYTDLNLLRIFHVVMLERNMTRAAARLNMTQPSVSNAIQRLREVLADDLFIKVSGG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIK 140 V PTA A + I ++S++ +D E + IA + V ++ + + Sbjct: 61 VVPTAKAEAIWPTIRNSIQSLIQTIDPERFEPSVATDSFRIAMSDFVATQLILPVAGPLF 120 Query: 141 THYPQL--LLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + +L + + L Q D+ + ++ +L T V R+ +P Sbjct: 121 NAAPHVSLVLCQNSVDNIVPGLIDGQFDMAAGVIPYKEARIRSILLKTLTYVCAMRKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L A H+ + ++ + + + + R I T + +++++D Sbjct: 181 LAKEPLTFADFMAARHLQVSLSGRS-GFIDRYLTDRGMFRDIALTIRHYTLAPEILSSTD 239 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++AI+PS + S + L K P + + S+ +++ + P + + + + Sbjct: 240 LIAILPSEVISH-SHQYDLLKTTAPPIPVYEDSISLLWHERNDAMPAHRWMRERLID 295 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 131/297 (44%), Gaps = 10/297 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLL + EA+Y + + A++VL++T A+S ++ +LR+ F DPLF+R+G+GV Sbjct: 1 MNLRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGV 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIK 140 PTA L I + L+ + L+ ++ R+ I++ + ++ P I R ++ Sbjct: 61 KPTAMTEALMPAIRESLDKLRNGLEPRSVFEPSRSTRVFNISSRDASAHILAPPIARRLE 120 Query: 141 THYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + P S ++L+ + DL ID ++ +L + V +P Sbjct: 121 VQAPGVRISWSQPQRSAIASELASGRLDLAIDVQDLRGADLERVLLSSTKYVCALASDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L + + + H+ + + S + + + + + +V + Sbjct: 181 LANEPLTLDKFFSMRHIAVSSRREGRSLIEEMARSLGHRITPVHRLPHYQPALEVVRCTH 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + P + L + P + +++++ +DP L + +IR+ Sbjct: 241 LALAAP----QPVTEGSGLAVMKLP-FDFPSPGSMLYWHREYAQDPALMWLRGLIRD 292 >UniRef50_Q7MEL0 Transcriptional regulator n=18 Tax=Gammaproteobacteria RepID=Q7MEL0_VIBVY Length = 289 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 67/286 (23%), Positives = 127/286 (44%), Gaps = 14/286 (4%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNL+ F V ++ AA L LT A+S SI++L + LF++KG+G+ PTA Sbjct: 5 MDLNLIQTFLLVAEYQSYTKAADHLGLTQPAVSASIKRLEKVVNKQLFVKKGRGIEPTAS 64 Query: 89 AMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLL 148 A L Q + + A+ ++ + + ++ + P+ + P+ L Sbjct: 65 AYQLIPKFHQAISIVDNAISERSAFQ------VCCSETLLHSLTPIEHTVFHESPPEKYL 118 Query: 149 RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRET 208 Q+ Q + DLIID + + + + + V+ICR+G+P + + + Sbjct: 119 -------LFEQIRQQKMDLIIDTVITKDSSFVIENAYQEPAVVICRQGHPRIQGQLSKAQ 171 Query: 209 IDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFY 268 +H L + N +G Q E +R + + ++ ++A VA D L ++ F Sbjct: 172 FYQESHCLFSGKWNNTTGFEQLANEPIEERIVEIVTTSLSSMALYVAQRDCLGVVSRSFA 231 Query: 269 NLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +S+ L+ L P + I + Y+K L +P + + I+ Sbjct: 232 LKWSKALKLQILDCP-IAISLIPYKFIYHKRELNNPAHQRLREKIK 276 >UniRef50_Q4KCL9 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=Q4KCL9_PSEF5 Length = 311 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 122/303 (40%), Gaps = 8/303 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + ++DLNLL FEA++ AA L +T SA+S ++++LR ++ DPLF+R G Sbjct: 1 MNQMNIASVDLNLLKAFEALHDESSASRAALRLGVTQSAMSAALRRLRELYGDPLFVRTG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYR 137 +G+ PT A L +S+ L +L + R++T+ + + Sbjct: 61 RGLAPTLKANQLKPVVSEALNKCRQSLAMVAPDTADYQGRSVTLGLSDDFEIAYGRQMIE 120 Query: 138 AIKTHYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 A+ P+L L R L Q DL I R + VL + + + Sbjct: 121 AVARRAPKLRLIFRQSHSQIVAEALLQRSVDLAISAGGFAERLLSRQVLGEGHYLCLADP 180 Query: 196 GNPL-LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 + + E H+L+ + + + + RQ+ ++ + + L+ Sbjct: 181 ASLAPGQQQISLEEFVAREHLLVSSQGF-IGITDEGLANLGLSRQVCASTTHFAALPFLL 239 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 S +A IP+ + L+ LP P L + + + DP+L V + I Sbjct: 240 KGSQAVATIPAHAARRIAELTGLQLLPCP-LALPRYPIELGWRTSPQTDPLLVKVREAIV 298 Query: 315 NAF 317 +F Sbjct: 299 ESF 301 >UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria RepID=NODD1_RHISN Length = 322 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 113/294 (38%), Gaps = 4/294 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL +A+ + + AA+ +NL+ A+S +I +LR F D LF G+ + Sbjct: 1 MRFKGLDLNLLVALDALMTERKLTAAARSINLSQPAMSAAITRLRTYFRDELFTMNGREL 60 Query: 84 TPTAFAMHLHEYISQGLESILGAL---DIEGSYDKQRTITIATTPSVGALVLPVIYRAIK 140 PT A L + + L I ++ D R+ I + + + L + + Sbjct: 61 VPTPRAEALAPAVREALLHIHLSIISWDPFNPAQSDRSFRIILSDFMTLMFLERVVVRVA 120 Query: 141 THYPQLLLRNPPISD-AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + P SD + L + D +I + T LF + V + N Sbjct: 121 REAPAVSFELLPFSDEPDELLRRGDVDFLILPEMFMSHTHPRAKLFDERFVCVSCPTNQK 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 L + + + HV +Q S ++E R++ I + ++ +D Sbjct: 181 LPPQLSIDNYVSMGHVAAQFGKQRPSVEEWLLREHGLRRRVEVAVPGFTMIPSFLSGTDR 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +A +P R F++ PL P ++ + DP + ++ Sbjct: 241 IATLPLRLAMHFAKAIPLRITELPQPIFPAFTEAVQWPAPHSSDPASLWMREIF 294 >UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=Idiomarina loihiensis RepID=Q5QVJ9_IDILO Length = 331 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 123/300 (41%), Gaps = 10/300 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR++DLNLL I A+ + + AA+ L L+ A S ++ + R IF DPL R Sbjct: 27 MVNLRSLDLNLLVILHALLEEQHVTRAARRLALSQPATSNALDRCRHIFDDPLLERVAGE 86 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIK 140 + TA A L E +SQ L +I ++I ++T+ + G +V+ + + Sbjct: 87 MRLTAKAQSLKEPLSQALLAITAIVEIPKVELTQVRQTVRLIMADQPGLIVMTHLLTKLS 146 Query: 141 THYPQLLLRNPPIS---DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 T P++ L P DA ++L + D+ I + ++ V+ R + Sbjct: 147 TSAPKVNLSLLPWRSSKDALHRLENGEADIAISTFPALPPKFYRQQIAYESYVVAMRASH 206 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P + + + H+++ E + + + + R + N I L+ + Sbjct: 207 PAAQ-KFNADEWLAWPHIVVSGEGNARGSVEEVLAQQGKVRHVGAVVPNFTMIDPLIKAT 265 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 DM+A P N S L P + + ++ D ++ VI+ +++ F Sbjct: 266 DMIATTPM---NCLSDPQGLAIFE-PPIAVPGFSLHLAWHARRDSDLVVKHVIETLQHLF 321 >UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax=Burkholderiaceae RepID=PHCA_RALSO Length = 347 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 121/303 (39%), Gaps = 13/303 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + N+D LL IF + + A+ +++T A+S S+ +LR IF DPLFIR G+TP Sbjct: 1 MVNVDTKLLVIFVELLSKRNATYVAEKMHMTAPAVSHSLGRLREIFDDPLFIRVPHGLTP 60 Query: 86 TAFAMHLHEYISQGLESI----LGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKT 141 T A+ L + + L+ G + + T I+ ++G + +K Sbjct: 61 TPKALELGPKVREMLDLWAAINEGDIATFDPLEAAGTFNISFAGTLGDALFDRFLLRVKR 120 Query: 142 HYPQLLLRNPPISDAENQ---LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P L +R S E + + DL + + V+ + NM + R+ +P Sbjct: 121 LAPGLQVRLTESSSWEADVAAMRSNELDLAFSPFPTRHPEIVEEVVTSFNMWVCARKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFS------GLRQRVQEMFPDRQINFTSYNILTIAA 252 +L + H+ + L +Q+ R T + T A Sbjct: 181 VLKDHCSLDQYLECEHIFIAQGNPGTRAAPSLIPLDYALQQRGLKRHSTMTVHAWRTQAE 240 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 + A +DM+ + S +L + L P PS E + ++ +++ P+L ++ Sbjct: 241 VAAQTDMIFTVNSLMKDLVCETYNLNAFPLPSELETVLGLNMLWHRSRNTHPMLVWARNL 300 Query: 313 IRN 315 + Sbjct: 301 FKQ 303 >UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMY5_VEREI Length = 304 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 20/302 (6%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR IDLNLL F+A+ + + AA+ L L+ SA+S ++++LR F D L +R +G+ P Sbjct: 3 LRQIDLNLLVTFQALVEERNVSRAAERLALSQSAVSHALKRLRNTFQDELLVRGPRGMEP 62 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L + GL +I A+D + S+D T ++ T V ++ + ++ Sbjct: 63 TPRAVTLAIAVKSGLATIETAVDEKRSFDPATCHSTYYLSVTEYVRPFIMAHMCAYVREA 122 Query: 143 YPQLLLRNPPISD-------AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 P + L + A L DL N ++ LF D + R Sbjct: 123 APHVRLVFESPDEHQVGSAVAYEGLQIRLADL------PVNGPMESMRLFDDTFAVAMRR 176 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +P E E AH+ + S + + + R + N L +V Sbjct: 177 EHPFAEQELTLEKYLQLAHIKVT--GVGSSAIDRALTARSLVRDVVVKMPNWLEALEVVE 234 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +D++ +P+ + L P P + ID + ++ + DP + + +R Sbjct: 235 CTDLVVAMPNHWTRLGRLPRCCITRPLPLALQMPIDAA--WHPRNSSDPAHVWLRETVRQ 292 Query: 316 AF 317 AF Sbjct: 293 AF 294 >UniRef50_A0AZD8 Transcriptional regulator, LysR family n=17 Tax=Proteobacteria RepID=A0AZD8_BURCH Length = 394 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 120/308 (38%), Gaps = 9/308 (2%) Query: 17 EGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLF 76 G L +D L+ I + + + AA LN++ A S ++++LR + DPL Sbjct: 12 RGTFDAAGALDVLDARLMRILLVLLTERTVSRAAVRLNMSQPATSAALKRLRTLLGDPLL 71 Query: 77 IRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLP 133 +R G+ PT F L E + L I + ++D RT I + L +P Sbjct: 72 VRSRYGMVPTEFGARLIEPLRNALRVIDFIRIQQPTFDARTSVRTYRIGCPDYLNVLFVP 131 Query: 134 VIYRAIKTHYPQLLLRNPPISDA---ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMV 190 + + P L P+ D E L+ + D++IDN + LF D +V Sbjct: 132 KLVALFRERAPHAQLVFHPLGDGFDDERALADGELDVVIDNRPVRRSRFRQDDLFDDRVV 191 Query: 191 LICREGNPLLSLE-DDRETIDNAAHVLLLPEE-QNFSGLRQRVQEMFPDRQINFTSYNIL 248 + R +PL + A + P + + ++++ + R+I T + Sbjct: 192 CLMRATHPLARRDAMTAARFAAAPQLCPTPSWLEASGAIDRQLERVGLQRRIVVTLPHFE 251 Query: 249 TIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHG 308 A + +D++ R +++ PL + P + I + I +N+ Sbjct: 252 LAAHALVRTDLILTTTYRLARHYAKLLPLAAVALP-VEPPDIAYRITWNESGSCAEGGRW 310 Query: 309 VIDVIRNA 316 + +I A Sbjct: 311 LRGLIAEA 318 >UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WJY9_BORBR Length = 329 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 127/300 (42%), Gaps = 8/300 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + NID+ LL + + + A L+++ A+S ++ +LR++F DPL +R G+ Sbjct: 20 PAMDNIDIKLLRTLLVLMSERSVSRTADRLDVSQPAVSHALARLRILFDDPLLLRSRAGM 79 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A + + + L +D +R ++ L++P I+R ++ Sbjct: 80 VPTDRASEIEARVRRLLAEYDALAHRPQPFDPSVSERHFVLSAPEYAEHLLMPPIFRHLR 139 Query: 141 THYPQLL--LRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 H P + +R P A L + DL I + ++++ LF D +V I +P Sbjct: 140 AHAPNIRVEVRAPDPERAYELLESGEVDLRIAWLRKPAQSLRSMQLFQDRIVCIADRDHP 199 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSG--LRQRVQEMFPDRQINFTSYNILTIAALVAN 256 L H +N SG + + V+ + F N LTI + Sbjct: 200 ALDGTLSLADFLRYPHARPWGMGRNMSGRVIDEAVELLGKKLAPPFLVQNFLTIPYTITG 259 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 SD+LA++P F+ P++ L P L ++ + ++++ S +D + V+ A Sbjct: 260 SDLLAVLPLVLARAFAAQQPIQILEVP-LRLPRMRYGAYWHERSHKDVGHKWLRSVVLQA 318 >UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHX1_PSEF5 Length = 308 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 126/295 (42%), Gaps = 6/295 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LRNIDLNLL + +A+ K + A L+L+ AIS S+ KLR + DP+ IR+G + Sbjct: 6 LRNIDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGLLDDPILIRRGSELVL 65 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 ++ A ++ + + + L I +D QR T+A + ALVLP + ++ Sbjct: 66 SSLAQNIQQPLREILGQIETLFGKSIDFDPASSQRIFTLAMSDYGAALVLPNLMVRLRRD 125 Query: 143 YPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P L++ Q+SQ + DL + + + VLF + + Sbjct: 126 APNTTLVVTQDTRHGMFEQVSQGKIDLALGVFPNLSGDISTEVLFEETFSCLLDRRTLPA 185 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 D ++ H+L+ + + +++ R+I + + T +++ N+D++ Sbjct: 186 DGTLDLDSYLARPHILVSMDGSANGEVDSLLRDEGLQRRIAVSVPHWRTAPSMIHNTDLI 245 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + +R + L +L P I +++ +P + + ++ Sbjct: 246 LTVATRTLDEALLNQDLIQLRPPLPIPPFPFVQI-WHQRFDNEPAHVWLREQVKQ 299 >UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZQ9_DELAS Length = 323 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 121/294 (41%), Gaps = 10/294 (3%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL +A+ + AA ++L+ A+S ++ ++R F DP+ +R G+ + PT A Sbjct: 6 DLNLLIALDALLSTGSVTQAAGRMHLSTPAMSHTLARIREAFGDPILVRAGRSLVPTPRA 65 Query: 90 MHLHEYISQGLES---ILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 + L E + L + +D G +R + + + + RA++ P Sbjct: 66 LALAEPVRALLAQARALQDPVDAGGLAGLRRRFVVRAPEGIAVVFGASLSRALEAEMPLA 125 Query: 147 LLRNPPISDAE-NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL----- 200 L+ P + A+ L + + DL + + + + V+ +V + R G+PLL Sbjct: 126 SLQFLPETHADPGALREGRIDLDVGSFRSMDPETESLVISEQTLVGVVRAGHPLLKSARK 185 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 S A HV + S + ++ + RQ+ + + + +D++ Sbjct: 186 SQRPSAAQFAAARHVGITQRPGESSPVDAALEALGLQRQLALLVPSSFSALIAASRTDLV 245 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 A +P+R + + L P + + + ++ DP + D I+ Sbjct: 246 ACVPTRTAHGMAASLGLVVFALP-IEVQVQPMRMAWHPRHQADPAHQWLRDCIQ 298 >UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. R11 RepID=B7QWJ8_9RHOB Length = 320 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 115/300 (38%), Gaps = 11/300 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +DLNLL + +AV+ V A + L L+ SA+S ++ +LR DPLF+R+G + Sbjct: 1 MNFATLDLNLLRVLDAVFAEGSTVKAGRRLGLSQSAVSGALSRLRHALNDPLFVRQGNQL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T FA L + L+ + L +D I+ +++P + + Sbjct: 61 VATEFAESLRHDLRAELDRLETLLSPPSHFDPATASGLFRISAADFFCDMLMPRLGDLLS 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + + L + Q DL + + LF ++ R GNP Sbjct: 121 RKAPGIRAQLLDLVPRHHVESLERQQADLALLPDTDLPDWMMREPLFRSEYAVLARRGNP 180 Query: 199 -----LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 + + HVL P + + + ++ R++ T + + Sbjct: 181 ATKDLRHGERMPFDLFCSLPHVLFAPHGDLTAQSDEALAKVGRRRRVVMTVPVFSGVCRV 240 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 V+ SD++ ++P + + L+ P + + I +++ + P+ + I Sbjct: 241 VSESDLIGLLPLQLARKVQPVYGLDLF-VPPIAIDPIQLIGVWHRKADTAPMAAWMRQQI 299 >UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MT9_RALEJ Length = 334 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 117/297 (39%), Gaps = 6/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +DLN L + +A+ + + AA+ L L+ A S S+ +LR F D L + G+ Sbjct: 1 MRFNKLDLNQLVVLDALLSTRSVGKAAERLFLSQPATSCSLARLREYFEDDLLVAVGKTQ 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A+ L + + L I S+D R I ++ V ++ L + R Sbjct: 61 VLTPLALGLRKPVRDVLLQIQTITRARPSFDPATSTRRFIIESSDYVISVFLSQVIRRAA 120 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + IS L + +L+I F LF D + + + Sbjct: 121 EAAPLMQFDLRAISPQTPEHLESGEAELLIAPEFAMVPGHPSEPLFEDTFSCLVSADSTV 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPD-RQINFTSYNILTIAALVANSD 258 ET +AAH+ + R+ R+ + + + + AL++ +D Sbjct: 181 GQDGLTVETYFDAAHIGVEWGGGRRVTFDSRLIATGKRTRRQDVIAPSFTLVPALLSGTD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A +P+R ++ + L ++ P ++ + + K+ DP + + +++R Sbjct: 241 RIATLPTRLAEQMAQRFGLRRVTCP-IDLPAFSEHLQWQKYQESDPAIVWLRELLRE 296 >UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CG0_MESSB Length = 304 Score = 223 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 120/296 (40%), Gaps = 9/296 (3%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDL L F + + + AA L L +S+ + KLR F DPL + G + PT Sbjct: 5 KIDLFTLRGFSILMEERNVSRAAFKLGLKQPTMSRMLAKLRAYFDDPLLVWSGGHMVPTP 64 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIKTHYP 144 A+ L I Q L ++ +D + TI +A T + L + + P Sbjct: 65 RAILLESEIHQVLATMERLSSSPQEFDPKTSGLTIRLAATGYTENVFLARVMSEVAVRAP 124 Query: 145 QLLLRNPPISDAEN--QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS- 201 + L P + L + + D ++ ++ VLFTD +V I R G+P L Sbjct: 125 GVQLEIRPPDRLHDTSALEKGEVDFLVGWNVTPAPVLRSRVLFTDELVCIARAGHPALED 184 Query: 202 LEDDRETIDNAAHVLLLPEEQNFS--GLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 E HV + + L +R+ + + F N+LT+A +VANSD+ Sbjct: 185 GNLSYERYVALPHVQFDTPSKTTTELLLHERLAQRGDRPFVQFRVQNLLTVAEIVANSDL 244 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A + RF + + + L P + + +++ R+P H ++ Sbjct: 245 IATVSKRFVISYLQQYQLSIAELP-VRLPVMQNRAWWHERMHREPYSHWFRSLLAE 299 >UniRef50_C6C4P6 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C6C4P6_DICDC Length = 325 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 121/298 (40%), Gaps = 8/298 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 + +DLNL +FEA+Y G AA L +T SAIS ++ ++R I+ D LF R G+G+ Sbjct: 5 NIETMDLNLFKVFEALYEEGGAGRAALRLGVTQSAISAALGRMRNIYGDRLFERTGRGLR 64 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKT 141 PT A LH IS L +L + S + RT+T+ + + + + Sbjct: 65 PTRRADELHPIISDALNKCRQSLSMANSVGDEFQGRTVTMGWSDDYEIALARTLTNQVAA 124 Query: 142 HYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 YP + L R A + L + DL I ++ + VL + + P Sbjct: 125 EYPGIRLIFRQTHSRVAADMLMERAVDLAISTEGFSSSILGRQVLGGGSYACLLD-NRPD 183 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 E H+L+ + + + + R+I ++ + + L+ S+ Sbjct: 184 APDALTLEEYIRRRHILVSS-GGFIGIVDEALAALGLQRRIEVSTTHFAAVPYLLKGSES 242 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 L +P+ + L LP P L + + +LRDP + V ++ F Sbjct: 243 LVTLPAHAAYPIAAIADLRVLPCP-LVLPGYAIELGWRLDALRDPAVVAVRQAVQCVF 299 >UniRef50_Q15Y73 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Y73_PSEA6 Length = 302 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 114/287 (39%), Gaps = 8/287 (2%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY 95 +FE++YV + + A L++TPSA+S SI++LR DPLF R + PT + Sbjct: 17 VFESLYVEQNMTRTADALHITPSAVSHSIKRLRECLGDPLFQRSNNRMLPTPACQRMAPL 76 Query: 96 ISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPP 152 I L + + G + + I ++ +LP + + P++ + Sbjct: 77 IIDNLTRLRQIMQHWGEFQPLTSEHHFRIGMHYALEPSILPALTERLALLAPKVTFSSVR 136 Query: 153 ISDA--ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETID 210 + L DL +D V H L D ++ R+ +PL ++ Sbjct: 137 VDRITLTRDLGAGHIDLALDVALPIKSPVLHQKLIDDEFCVLVRKDHPL-RDRLTKDAYF 195 Query: 211 NAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNL 270 NA H+ + S Q+ R++ N + +VA S+ L +P R Sbjct: 196 NAEHIGVSNRSSGASVEDLLFQQQGLSRKVVIRCQNYFSAKGMVACSNHLLTVPRRIAEH 255 Query: 271 FSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 + ++ + P +N I ++++K + +D L + + F Sbjct: 256 LKQD-DVQLVSLP-VNIADISTHLYWHKNTEQDSALSWLRALFDGIF 300 >UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KZI9_FRASN Length = 310 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 5/299 (1%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + ++DLNLL +A+ + + AA+ L LT SA+S+++ +LR DP+ +R G Sbjct: 2 HAMQSTSSLDLNLLVALDALLEERSVNAAARRLRLTESAVSRALGRLRRAMDDPVLVRAG 61 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYR 137 + PT A+ + + +E D RT TI + ++ + + Sbjct: 62 HRMVPTPRALAVQAEVHALVERAHAVFTPIREPDLATLARTFTILASDALTTAIGVDLLD 121 Query: 138 AIKTHYPQLLLRNPPISDAENQ-LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 + P + +R P A + L DL I ++ T+ + VL + + + R G Sbjct: 122 RLTRDAPGVRVRFLPEPSATDDPLRDGTADLEIGDIDSTSPEIHIEVLGEEQALAVVRAG 181 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +PL E + A HV + L + + R + + + LVA Sbjct: 182 HPLTRGRLTPERLAAARHVTASRRGRFAGPLDEVLAARGLRRTVAVSVPSHSAALLLVAG 241 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 SD++ ++P+R L L L+ + + ++ D + +R+ Sbjct: 242 SDLVGLVPARLGRGLLDSLGLVALDL-GLDLPTLTIAQAWHPRYEADAPHRWLRGHVRD 299 >UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulator ybdO n=3 Tax=Cronobacter RepID=C9XYN5_CROTZ Length = 334 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 86/299 (28%), Positives = 148/299 (49%), Gaps = 6/299 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 L+ DLNLL IFE +Y+++ + AA+ L LTPSAISQS+Q+LR DPLF+R G+G Sbjct: 18 LQDLKKFDLNLLVIFECIYLYRSVSKAAEALFLTPSAISQSLQRLRNQLNDPLFVRSGKG 77 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTH 142 +TPT +LH Y+ L + +++ ++ + P++ A LP + A + H Sbjct: 78 ITPTTVGTNLHHYLEDNLNQLEQTINMMQGAPLRKNFVLYCPPALAADHLPGLVSAFREH 137 Query: 143 YPQLLLRNPPIS----DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 Y L + S AE+ L+ + DLII T+ +V F++ VL+C E +P Sbjct: 138 Y-DFELEHYDTSLASETAEDLLAYRKADLIIGMAPVTSHSVICKHCFSEETVLVCSENHP 196 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L D + L + + E+ +RQI FTS ++ +I A++ ++D Sbjct: 197 RLGDHADDAALAQEKFTLFNGTAEGQKHYHVKSGELIGERQIAFTSNSLSSIMAIIGSTD 256 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 + I+P+ + + + L + + + D+ + YN+ SL + + +I F Sbjct: 257 FIGILPAPALRRYRQVFGLRPVKL-NFSLPHYDYYLIYNRASLTNASFVSFVSLIEQHF 314 >UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=Pseudomonas RepID=B0KG68_PSEPG Length = 324 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 130/308 (42%), Gaps = 9/308 (2%) Query: 11 LSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVI 70 + G P LR D+NL+ +FEA+ + + AA+ L + +S ++ +LR + Sbjct: 6 PHNTNGPGAPMNRNELRKADINLMVVFEALMQERNLTRAAEKLFVAQPTVSAALARLRAM 65 Query: 71 FPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSV 127 F DPL +R G + P+A A + +Y++ L+++ AL + +D + T I + V Sbjct: 66 FNDPLLVRVGNRMEPSARAEEVIKYLTPALDAMSVALSLTHDFDPLTSKMTFRIGLSDDV 125 Query: 128 GALVLPVIYRAIKTHYPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLF 185 + +LP + RA++ P +++++ + L+ + I + VL Sbjct: 126 ESGLLPPLLRALRVEAPNVVVVVQHVDYWRIPDLLAAGDVTVGISQTKGLPANAKRKVLR 185 Query: 186 TDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSY 245 T ++ R + + HV + P + ++E+ +R++ + Sbjct: 186 TMQGRVV-RAD--KSATPLTLDEFCARPHVQVSPTANTQGVVDDWLKEIGRERKVVLSVP 242 Query: 246 NILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPI 305 ++ A++A +D+LA P R L+ P ++ ++ + + DP Sbjct: 243 QFSSLPAILAGTDLLACCPDYAAQGMERWGNLQAEQLP-FETTALELAMVWLSTTDSDPA 301 Query: 306 LHGVIDVI 313 + + Sbjct: 302 ERWLRSRL 309 >UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9F6_RHIL3 Length = 317 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 8/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +L IDLNLL F+ + + + AA L T SAIS S+ +LR +F D LF R+ + Sbjct: 5 SLNQIDLNLLRTFDVLMRERSVTRAADRLGRTQSAISHSLGRLRDVFKDDLFTREAGIME 64 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKT 141 PTA A L E ISQ L I A+D ++D R I + LP + Sbjct: 65 PTARAKELAEVISQALHEIRVAVDRHLNFDPTTTSRNFRIGLSDYTAVTYLPELIENFSM 124 Query: 142 HYPQLLLRNPPIS--DAENQLSQFQTDLII-DNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P L DA L + + + N + L D MV GNP Sbjct: 125 LAPNASLNVVHAREPDALGSLKNREVECAVLGNPKLDAEHFEVVELSRDRMVCAGWTGNP 184 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 ++ + + + H+ + + +Q++ R++ T + L ++ ++ Sbjct: 185 AMA-DMSLDRYLASPHLQISADGIAAGVADITLQKLGLHRKVVATIPHYLVAPWVIKGTE 243 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +++ S +P P L + S+ +++ + DP ++I++ Sbjct: 244 LISAFGDGVLLALSEESETAIVP-PPLELPDVTISLIFDRSNELDPGHVWFRNLIKD 299 >UniRef50_A9AMZ1 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=A9AMZ1_BURM1 Length = 353 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 79/324 (24%), Positives = 135/324 (41%), Gaps = 13/324 (4%) Query: 2 DSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAIS 61 D+ + I C+ R G + +DLNLLT +A+ + + AA+ LNL+ SA S Sbjct: 12 DAPHAIVDCIGRHPY-GVFDYARRMSRVDLNLLTALDALLTERSVTGAARRLNLSVSATS 70 Query: 62 QSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEG-SYDK---QR 117 +++ +LR + D L ++ G+ + T +A L I L +D + Sbjct: 71 RTLARLRALTGDRLLLQAGRTLVLTPYAEQLSRRIPALAREAESVLSRAAYRFDSATLAQ 130 Query: 118 TITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQ-LSQFQTDLIIDNMFCTN 176 T+ L+ + ++ P + LR P D Q L + DL I + Sbjct: 131 RFTLCAGEGFVDLLGAALTNRVRRAAPGVQLRFVPKPDWNAQALREGLVDLEIGVVKTAA 190 Query: 177 RTVQHHVLFTDNMVLICREGNPLL-SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMF 235 ++ VLFTD V +CR G+PLL + E D + HV + + + + R++ Sbjct: 191 PEIRTRVLFTDRYVGLCRIGHPLLAAGEIDMQRWLAYDHVTISRTGEADNPIDARLESTG 250 Query: 236 PDRQINFTSYNILTIAALVANSDMLAIIP-SRFYNLFSRCW----PLEKLPFPSLNEEQI 290 R + + LV +SD+LAI+P S N F + ++ P L Sbjct: 251 VPRNVPIVVPSYTGAMQLVRHSDLLAIVPHSCLGNAFMPDYAAENGVQSFALP-LPLPAF 309 Query: 291 DFSIHYNKFSLRDPILHGVIDVIR 314 + S ++ DP + D +R Sbjct: 310 NISAIWHPRLDHDPAHRWLRDEVR 333 >UniRef50_Q0VH46 Putative LysR type regulator n=3 Tax=Proteobacteria RepID=Q0VH46_9PSED Length = 308 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 125/292 (42%), Gaps = 6/292 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL FEA++ + AA L +T A+S S+++LR + D LF G+ + PT FA Sbjct: 11 DLNLLFAFEALWRDHSVSIAADNLGVTQGAVSSSLKRLRQEYGDRLFTVVGRRMEPTPFA 70 Query: 90 MHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTHYPQL 146 + + + + L+ + A + Q T+ T A+ LP I + ++T P Sbjct: 71 VQIAPTLLEALDLVREAQSRALEFSPQHCRKVFTVRTRDIGEAVCLPTILKMLQTQAPMS 130 Query: 147 LLRNPPISDAENQ--LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + S E LS + DL I + + ++ + + V R G+PL E Sbjct: 131 RINTVASSVEETLIGLSTGRIDLAIGYLPTLKTDIHRTIVSSQHYVCALRRGHPLADAEL 190 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 E H+L+ L + + E I L+ L+ SDML ++P Sbjct: 191 TLERFLAQQHLLVETGGTGHVLLERALIEAGARHNIGVRIPQYLSAPHLLLESDMLWVVP 250 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + SR +PL P P + E D +++++ RDP +++ A Sbjct: 251 NVLGKTLSRFFPLLLKPLPLVLPE-FDIALYWHDRFHRDPQNKWFREMLAAA 301 >UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J825_AGRRK Length = 333 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 102/300 (34%), Gaps = 6/300 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 LR IDLNLL F + + + AA+ L L +S ++++LR D LF+R G Sbjct: 4 MNDAALRKIDLNLLLAFSVLMQERNVSRAAERLLLGQPGLSAALRRLRETLDDELFVRVG 63 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 +G+ PTA A+ + I L I A+ ++D Q + ++ + + Sbjct: 64 RGLQPTARALSIAPAIEDALSGIERAIRPPAAFDPSSWQGEFRVGMCDNLESDFFGPLAA 123 Query: 138 AIKTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 ++ P L +A L + D I LF I Sbjct: 124 RLRGLAPNARLTGVAFDKREAGRLLDEGAYDFSISVHDEPASWHIRAPLFNQASACIYDP 183 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 + L E A H+ + E + + + + RQ+ T + + Sbjct: 184 RHIRLDAPLGLEDFAKADHITVSLEGNTLTNVDLALARVGYHRQVVATVPRYSALPMALR 243 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A IP ++ L + P L+ ++ Y + D + Sbjct: 244 AMPAIATIPESIARCMAQLHNL-TVSQPPLDLPADPVTMLYRRVDQADSRAVWFRRLFVE 302 >UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales RepID=B7VH72_VIBSL Length = 311 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 120/291 (41%), Gaps = 7/291 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 + NLL +F AV + AA L+ S IS ++ +L+ LF+RKG+GVTPT++A Sbjct: 7 NFNLLAVFSAVMEQGSLSKAADQLSTNQSTISTALARLKKEIGQELFVRKGRGVTPTSYA 66 Query: 90 MHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 L+E I + + ++D +R I++ + ++L + A+ L Sbjct: 67 QSLYEQIKTPIHELNDVFQSMANFDEQSSERKFVISSPEHLQWILLNS-FAALPNQNLSL 125 Query: 147 LLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + + P SD L + D +ID + + ++ L+ V++CRE +P + E Sbjct: 126 EVFDQPDSDERIYEDLLTQEFDAMIDIVVPEHPSIVSETLYEGEFVIVCREDHPRIQGEI 185 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 N H +L + L R+I F ++ + L + SD + ++P Sbjct: 186 SEAQFMNEKHAVLDRTRRKVRSLNHYTSLDLSKRKIVFHGRSLFSNILLCSQSDYITVVP 245 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 F L+ P + I + + K DP + + + Sbjct: 246 LSMAVQFQERLGLQLFK-PPFEYQPISHYLIWLKKQNNDPAHKWFREQVIS 295 >UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q38ZY8_BURS3 Length = 310 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 6/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LR+ D+NLL F+A+ + + AA L + A+S S+ LR++ D LFIR G+ + Sbjct: 8 DLRSFDMNLLIAFDALMQERSVTRAAAKLRIQQPAMSHSLSTLRLLLRDELFIRVGRTLQ 67 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PT A+ L + L + AL E S+D +R +A T + +L+LP + +T Sbjct: 68 PTPRALSLQHTVRSSLLQLQEALKTEESFDPSNARRDFRVAMTNGIESLLLPDMVARFRT 127 Query: 142 HYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 + L R+ D + L + + +L I T+ ++ H LF + + Sbjct: 128 DAQGMTLLARSVDPQDMPDMLDRGELNLAIGCYESTHPWIRRHELFNETLTCCFNPDLLP 187 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + D +T HV++ L +++ + I N L + + A++ + Sbjct: 188 IKTPIDEQTYVETPHVVVSMRNTILGCLEDALRDARVELNIVSAGPNFLAVLMMAADTPV 247 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 L +PSR ++ + L P P ++ ++ ++ R+P + ++R Sbjct: 248 LTTLPSRIALRYADRFGLSTCPVP-ISFSANPIAMVWHAREDREPGSEWLRRLVREL 303 >UniRef50_C3K6Q2 Nodulation protein D n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K6Q2_PSEFS Length = 304 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 108/279 (38%), Gaps = 6/279 (2%) Query: 43 HKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES 102 + I A + L L+ A S ++ +LR F D L + G+ + T L + + L Sbjct: 20 EQNITRAGERLFLSQPATSAALARLREYFQDQLLVPNGRKMVRTPKGEALIQPVRDLLIQ 79 Query: 103 ILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQ 159 + L+ ++ QR + + V ++LP + R + P L P +D + Sbjct: 80 MRSTLENRAEFEPAQSQRKFVLMASDYVCTVLLPQVSRRLNELAPMASLEMIPPNDTPRE 139 Query: 160 -LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLL 218 L + DL++ +F D V + + NPL+ E HVL+ Sbjct: 140 TLERGNVDLLVLPATHLGDDHPSLTIFEDRFVCMTCQDNPLVGDSLSFEQYKQMGHVLVR 199 Query: 219 PEEQNFSGLRQR-VQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPL 277 Q + + + +R++ + + + + +A + R +R PL Sbjct: 200 WGMQRVPSMDEWFLNRYNFERRVEVITNAFSNVPTFLPGTLRIATMHLRLAQQCARELPL 259 Query: 278 EKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + LP P + + +I +N+ DP L + +I + Sbjct: 260 KILPVPW-DAPTLVMAIQWNRHQQHDPGLSWLRSLIVES 297 >UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB78_PHOPR Length = 305 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 127/296 (42%), Gaps = 6/296 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + ++ DLNLL +F +VY AA+ L+LT S++S +I +L+ + LFIR G+G Sbjct: 1 MSQNKHFDLNLLRVFLSVYNTCSFTKAAEELDLTQSSVSNAILRLKKTVGEELFIRAGRG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + PTA A L+ + + + ++ +D R + SV ++ P + + + Sbjct: 61 IQPTAVANQLYHQLENSMLKVEQTVNSFEQFDPLHTAREFHVYAIESVIHILQPRLDKYL 120 Query: 140 KTHYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 K + P ++ P + +QL Q D+++D + ++ + ++ M + + Sbjct: 121 KDYAPTIIFHELPAQEQQMYDQLQAEQIDVVLDIVQPDVVSLSSEAILSEKMCCVVSRHH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P ++ +E +HV N + E P R++ +++++ A A S Sbjct: 181 PRINEVLSKEQFLEESHVFFNMRRFNLTIADYFTYERLPYRKMYCEHSSLMSMLATTARS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + +++ P + L + P + I+ + + + + + I Sbjct: 241 EAISMAPYSLAKQCEGMFELRLIDSPY-KTKPINIFMVWPSRLKNNTSHTWLREAI 295 >UniRef50_B2I0F3 Transcriptional regulator n=11 Tax=Acinetobacter RepID=B2I0F3_ACIBC Length = 276 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 108/275 (39%), Gaps = 7/275 (2%) Query: 48 NAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGAL 107 AA + LT ++S + K+R F DPLFIR G + PT A + IS+ ++ + Sbjct: 1 MAADAIGLTQPSVSNGLNKIRQHFNDPLFIRVGNEMIPTELAKQIFPLISEVIDKVESIN 60 Query: 108 DIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPIS-DAENQLSQF 163 + ++D + TIA T ++LP + +K P + L PI+ + Q++ Sbjct: 61 NFNVNFDPLTSDQLFTIAMTDVSHLVLLPQLTNYLKEKAPLIRLNIRPITPETSYQMANG 120 Query: 164 QTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED-DRETIDNAAHVLLLPEEQ 222 + DL I + F + V+I + +P L + E +H+ + Sbjct: 121 EIDLAIGFLPQLEEGFYQQKFFRQHYVVISSKSHPRLDPNNFTLEDYMRESHIDID-AGI 179 Query: 223 NFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPF 282 ++ +Q DR I + L + +V +D +A +P + L+ LP Sbjct: 180 GHYHIKNELQNKGLDRNILIRLPSYLGVGLVVQETDAIATVPYYLSQVLLVRENLQILPA 239 Query: 283 PSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 P L+ D H++ F Sbjct: 240 P-LDFPTYDVKQHWHMSCHHKSSHKWFRQTCYELF 273 >UniRef50_A6FDU8 Transcriptional regulator, LysR family protein n=1 Tax=Moritella sp. PE36 RepID=A6FDU8_9GAMM Length = 280 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 15/290 (5%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + + D+NL+ F VY I AA++LN++ AIS +I++L PLFIR G+ ++P Sbjct: 1 MHDFDMNLIKPFAKVYELNSITKAAELLNVSQPAISGAIKRLETYLGYPLFIRSGRKLSP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 T A + + +S LE + AL + + + S+ + + H Q Sbjct: 61 TPNAQNFYSQVSTVLEIVDNALGNKEHF------IVYAPESILLKLSGI-------HDIQ 107 Query: 146 LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDD 205 L+ + D N L + DL IDN+ + + ++ +++ L+C + +P ++ Sbjct: 108 LIESSDSEEDTFNDLRMRKIDLAIDNVTQQDNSFCFELVRKEHLKLVCCKNHPTVTDSIT 167 Query: 206 RETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPS 265 E HV + N + + R I + + V NSD +A IP Sbjct: 168 MEHYLQLGHVAMKLVRNNMRAVEYFAKTALKARDIRVQVSSPANMMLAVQNSDYIAAIPE 227 Query: 266 RFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + L+ + P + IDF + Y+K L+D + + I+N Sbjct: 228 GLC-HIADSLGLKVIE-PPFTMKPIDFHLIYHKRYLKDKGHQQLRETIKN 275 >UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q122D0_POLSJ Length = 310 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 120/303 (39%), Gaps = 11/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 R +DLNLL + A++ + +A K L+L+ A S ++ +LR F D LF+R G+ Sbjct: 1 MNFRQLDLNLLRVLAAIHRTGSVTHAGKALSLSQPATSNALARLRDFFGDELFVRAPSGL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 PT L + L ++ + ++ ++ + L LP + A++ Sbjct: 61 KPTRLCEQLAPAVLAQLLALETVVTGHEEFEAAHSDMHWRLSLSDLGEMLFLPALAGALR 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC----R 194 + P L N ++ D L + DL I + R ++ +LF +N V + R Sbjct: 121 SQAPGARLSNISVAANDVAAALEAREIDLAIGILQPRQRGIRTELLFRENYVAVASPQWR 180 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 + + + AA V+ P + Q + M +I + + + L Sbjct: 181 PASGRSGRTLTTQQLAEAAFVVASPTATFHGSVEQMLVRMKLQDRIVLRARHFGALPDLA 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +D+L+I+P + + + P + + ++ + DP + +++ Sbjct: 241 LATDLLSIVPEMYARNLRQRYDFRVWGIP--GAPSYEVRLVWHSSTDNDPAHQWMRALVQ 298 Query: 315 NAF 317 F Sbjct: 299 QLF 301 >UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=C5A8T0_BURGB Length = 313 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 63/302 (20%), Positives = 119/302 (39%), Gaps = 7/302 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + ++DLNLL +FE ++ G AA L+LT SA+S ++++LR ++ DPLF+R G Sbjct: 1 MNAMNIADVDLNLLKVFEVLFDEGGASRAAIRLDLTQSAVSAALRRLRALYGDPLFVRTG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYR 137 +G+ PTA A L I + L+ +L R +++A + + Sbjct: 61 RGLAPTARARELKPLIGEALDRCRQSLAFGAPAPASFEGRAVSVAMSDDFEIAFGGRLIE 120 Query: 138 AIKTHYPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 P ++ R + L+ + DL I R + H L + Sbjct: 121 CAARLAPGLRVIFRQTHSQIVGDALANREVDLAIAAGGFATRGLGHMALGHGRYACLVDP 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 L + HVL+ + + + E+ R + ++ + + L+ Sbjct: 181 AAAPGRLVLTLDDFLAREHVLVSSGGV-VGIVDEALAEIGRRRTVRASTTHFAALPFLLR 239 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + +A IP +R L + P L ++ + +LRD + + I + Sbjct: 240 GTPAVATIPHHAAEALARMTGLGLVACP-LAMPAYPVALGWRVSTLRDAAVAKLRQAIVD 298 Query: 316 AF 317 +F Sbjct: 299 SF 300 >UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q486J0_COLP3 Length = 306 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 138/297 (46%), Gaps = 10/297 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +++ D +L+ F A+ K AAK L ++ SA+SQ + +L+ +F D LFIR +GV P Sbjct: 1 MKHSDYSLIPTFVAIVEEKSYTKAAKRLGISQSAVSQGVTRLQAVFKDTLFIRGSRGVEP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKTH 142 T F++ ++ ++ +E+I + + + I++ G +LP + + H Sbjct: 61 TQFSLDIYPTLASSVENIAFMMPEYKKFSAVKCEKQFVISSLSVFGFTILPPLSALMSQH 120 Query: 143 YPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P ++ P+ D N L DL+ID ++ V+ D + ++CR +P L Sbjct: 121 APLASVKIEPLNNHDFTNMLRSQHFDLVIDAHSNQYPQLRSKVIMEDTLCVMCRIDHPRL 180 Query: 201 SLE-DDRETIDNAAHVL---LLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 S + + HV L + SG + E+ R+I + + +I+ + ++ Sbjct: 181 SGDSISIDEFLAEKHVTHSQLDQKGGYLSGKGLKEDEILNQRKIAWQAASIMEMLPVIEC 240 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 D +A++P R + + + L++L + + I +++++ DP + + I Sbjct: 241 CDYIALLPQRLVDKYRHIYQLKQLHS-NFLLDPIKVAMYWHSSRTNDPSHKWLREQI 296 >UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4ELV6_BURCJ Length = 306 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 109/278 (39%), Gaps = 6/278 (2%) Query: 43 HKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES 102 + + A L LT A S+++ +LR + D + +R +G+ T A L + +S+ L Sbjct: 23 ERSVTRAGMRLGLTQPAASRALGRLRTLLHDRVVVRTPKGLEFTPRAASLAQRVSRVLTE 82 Query: 103 ILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPP-ISDAENQ 159 G + + +IA+ + ++P + ++ P L L PP S+ Sbjct: 83 AAGIVAPAVFDPATARGLFSIASLDHMALTLIPDVNARLERSAPGLDLDVPPSRSNNVEL 142 Query: 160 LSQFQTDLIIDNMF--CTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLL 217 ++ + + + L+ DN+V I R G+P LS + +HVL+ Sbjct: 143 VTDGTAGIALGVFDDDTLPAGIYRRKLYDDNLVCIVRNGHPALSARLTPKRFAALSHVLV 202 Query: 218 LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPL 277 + + + R+I + L +VA SDM ++P R + P+ Sbjct: 203 TIGGRGGELVDAALARQGLHRRIAMRLPHFLVAPMVVAKSDMTLVLPQRLARHVALSMPV 262 Query: 278 EKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + P + S+ +++ + DP + I Sbjct: 263 TLVKLP-VEVPSFSPSMIWHERTHDDPAHGWLRQQIVE 299 >UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9F0I7_SORC5 Length = 319 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 107/278 (38%), Gaps = 8/278 (2%) Query: 43 HKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES 102 + AA+ L L+PSA+S+++ +LR DPL +R G+G+ PT A+ L E +S ++ Sbjct: 18 EGSVTGAARRLRLSPSAMSRALARLRETLGDPLLVRAGRGLVPTPRALELRERVSHLVQG 77 Query: 103 ILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQ 159 L D + RT T+ T+ P + P + LR D ++ Sbjct: 78 AEAVLRPAEELDLKRLVRTFTLRTSEGFVESFGPALIERTGAQAPGVRLRFVAKPDKDSA 137 Query: 160 -LSQFQTDLIIDNMFC-TNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLL 217 L DL + T+ ++ LF D + + R +PL + HV+ Sbjct: 138 PLRTGAVDLETGVVDEDTSPELRTQALFRDRFIGVVRSDHPLGRAKITPARYAAGRHVVF 197 Query: 218 LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPL 277 + + + + R++ T AL +D++A +P L Sbjct: 198 SRRGVAKGRIDESLAALGLAREVVTIVGGFATAIALARATDLIATVPDHHTRSLRD--GL 255 Query: 278 EKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 P +I S+ ++ DP + D +R Sbjct: 256 FSFALP-FAAPEITVSLLWHPRLDADPAHRWLRDSVRE 292 >UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHJ0_HAHCH Length = 291 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 121/297 (40%), Gaps = 15/297 (5%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR +DLNLL I +A+ + + AAK L+L+ A S ++++ R +F DPL IR + Sbjct: 1 MNLRGVDLNLLVILDALLDERHVTRAAKRLHLSQPATSSALERCRHLFGDPLLIRGRGEM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGS--YDKQRTITIATTPSVGALVLPVIYRAIKT 141 +A A L E I L ++ + + ++TI I + +L +++ + T Sbjct: 61 RLSAKAESLREPIKALLTQAERVINQADTPLAELRQTIRILMADFPVSALLGPLHQRLIT 120 Query: 142 HYPQLLLRNPPIS---DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P L L P A QL++ + DL + + + L ++ ++ R+ +P Sbjct: 121 SAPNLDLIVQPWHGAKSALEQLAKGEADLAVSVFPNVGASFRCVELLYEDYCVLMRKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + HVL+ S + Q +Q R++ D Sbjct: 181 AAQN-FNLQQWLAYPHVLVSGRGDADSPVDQTLQARGLRRRVGLVVPYFQMAP------D 233 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++A++P+ P P + E + ++ D + V++VIR Sbjct: 234 LIALLPTHCVPQ--DTTKFTVFP-PPIPVEGFPLHLAWHVRKHGDQAVSHVVEVIRE 287 >UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=Proteobacteria RepID=Q0JY95_RALEH Length = 318 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 117/298 (39%), Gaps = 8/298 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + + DLNLL +F +Y AA + L+ A+S + +LR DPLF+R +G+ Sbjct: 1 MNIGSKDLNLLYVFHVLYQEGNASRAAARMALSQPALSHKLNRLRDELGDPLFVRAPRGL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 TPT A L + + + + D +D + + I TT + L+LP + ++ Sbjct: 61 TPTPRAHALAPQVQRLVGDLDAFYDACAGHDYLARSEHLHIYTTDYMEQLLLPALLPRLR 120 Query: 141 THYPQLLL--RNPPISDAENQLSQFQTDLII-DNMFCTNRTVQHHVLFTDNMVLICREGN 197 + P ++L N +L + DL I T L +++ V++ N Sbjct: 121 SQAPGVVLVTHNTRGELPREELEKGTCDLAIAGFYENLPDTFHQQRLCSEDFVVLASRAN 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P ++ D + H+L + + + R++ + L + LV + Sbjct: 181 PRIADGLDLDAFLACEHLLTTLTGDLNGVVDRALARQGHKRRVVAGLSSFLAPSRLVRGT 240 Query: 258 DMLAIIPSRFY-NLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 ++L +R L LP P +D ++ + D + + I+ Sbjct: 241 ELLLTCLRSVAEEAVARDPDLVLLPVP-FALPHVDMMQIWHARTDADRLRRWLRQQIQ 297 >UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory protein n=3 Tax=Streptomyces RepID=A3KIZ0_STRAM Length = 312 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 124/295 (42%), Gaps = 6/295 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + DLNL +F +Y + A+ L++T +S S+ KLR F D LF R G+G+TP Sbjct: 1 MGTFDLNLARVFVLLYETGSVTATAETLHVTQPTVSYSLGKLRRHFGDELFRRNGRGLTP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 TA A L+E + + L I G + ++D TIA + A +LP + A + Sbjct: 61 TAGARRLYEPLQRALAEIDGTVRQGDAFDAGTMSGRFTIALSDLGEATLLPRLLAAARER 120 Query: 143 YPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + P + DAE+QL + D+ + T+ LF + VL+ +P + Sbjct: 121 APGVSFTVRPFDVEDAESQLRRGDLDVFVATPVITSHLTVRIPLFRERYVLMVAADHPRV 180 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 ++ A H + R + ++ + + L+ +D++ Sbjct: 181 RGDEVTLAGLAAEHHATVFGPSGHVAPRAVLAAHGLLERVAVDATRFSMLPYLLEQTDLV 240 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 AI+P +F+ + + P + I+ +++ S R P ++ + Sbjct: 241 AIVPEYVGEVFTASHRVRLVRLP-FETQPIEIALYARHESSRSPAQRWLVQFMAE 294 >UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAE8_9RHOB Length = 307 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 112/301 (37%), Gaps = 6/301 (1%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 LR +DLNLL I E + + + AA L+++ A+S+++Q+LR + DPL +R Sbjct: 1 MRQVNLRGVDLNLLVILEKLLETRHVSLAATQLHMSQPAVSRALQRLRDLLNDPLLVRIA 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRA 138 T A + + L +I + Q TI + L P + + Sbjct: 61 GDYELTERAAEIQRLLPSVLATIQDVIAKPEFDPATAQETIRFSGPELEVNLYGPPLLKR 120 Query: 139 IKTHYPQLLLRN-PPISDAENQLSQFQTDLIIDNMFCTN--RTVQHHVLFTDNMVLICRE 195 +K P + L I + L + ++ + + L + V + + Sbjct: 121 MKQEAPGMKLELKSNIRNQFEPLENGEAHFVLSGQEPSAATSQLHRISLGRFSYVCLMSK 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +PL H+ ++ S + +++ M R + + Sbjct: 181 DHPLAGKPISLNDYLAQDHISVMITGSGQSIIDEKLAAMGRKRNVAVKIGSFFAAMHFCG 240 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFP-SLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +D+L ++PS F P P L + +F +++++ DP++ +++ Sbjct: 241 QTDLLFLVPSIFDKKIYEGHNTIASPVPDFLKDHHQEFFLYWHECYHHDPMIQWTRTLMK 300 Query: 315 N 315 Sbjct: 301 E 301 >UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJJ5_9DELT Length = 304 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 108/283 (38%), Gaps = 8/283 (2%) Query: 40 VYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQG 99 + + AA+ L ++ A+S + +LR F DPL + G G+ PTA A+ L E +++G Sbjct: 2 LVREGNVTRAARALGISQPAMSHRLARLRERFDDPLLLPSGAGMQPTARALQLVEPVARG 61 Query: 100 LESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQLLLRN-PPISD 155 L AL E +D + R TIA +VLP + P++ +R P + Sbjct: 62 LLEFDAALRSEARFDPRTSTRRFTIACADFGDFVVLPRALSRLHAEAPEIEVRMCRPGPE 121 Query: 156 AENQLSQFQTDLIIDNMFCTN-RTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAH 214 E L + D+ + C + + R +P + D +T H Sbjct: 122 LERGLERGLIDVAVLGNPCLPAANFRQRRVLDGRFATTVRADHPAVGPRMDLDTFVALPH 181 Query: 215 VLLLPEEQN--FSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFS 272 + + P ++ + + + R++ + T L + SD++ P + Sbjct: 182 LAIAPSSESDFGGVIDDALARVGEARRVAVRVPSYSTAPLLASRSDLVLTAPVGVILEAA 241 Query: 273 RCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 L P L D + +++ R+P + + Sbjct: 242 SFVSLRVFD-PPLPIPPSDVRMVWHERWQREPGHAWLRTTLAE 283 >UniRef50_A5KW47 Transcriptional regulator, LysR family protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KW47_9GAMM Length = 297 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 6/295 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 DLNLL IF VY + AA+ L+LT SAIS S+ +L+ LF R G+GV PT Sbjct: 3 HKFDLNLLRIFSVVYQQGSVTKAAEHLDLTQSAISNSLNRLKSSLGQELFNRTGRGVKPT 62 Query: 87 AFAMHLHEYISQGLESILGALDIEGSY--DKQRTITIATTPSVGALVLPVIYRAIKTHYP 144 FA L+E + L I ++ + D + + ++ + + R + Sbjct: 63 RFAQELYEQLQFSLMEIDTVMEGVTHFNVDHPHRFIVYSHEAIFHTLRQSLDRKLAGKPI 122 Query: 145 QLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 ++LL P + + L + DL+ID Q VL + + I R +P ++L Sbjct: 123 EVLLVEIPSDETRIYDDLVNEKIDLVIDISRPQGAMFQSSVLREEQLCCIVRHNHPRMNL 182 Query: 203 E-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 E ++E+ H L N + E+ P R+ ++L + V+ SD + Sbjct: 183 ESINKESYLQERHALFDLTRLNLKFVDWITDEVLPQRKAYSEHKSLLGMIEAVSYSDAVG 242 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 ++P + + + L+ LPFP N F I NK + + ++I +A Sbjct: 243 VVPLSVAKRYQKAFNLDLLPFPFANHTFDSFMISLNKMRS-NAANTWLRELIYSA 296 >UniRef50_Q0B1J5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B1J5_BURCM Length = 321 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 118/296 (39%), Gaps = 6/296 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 N L L F V + + A L ++ SA+S +Q+ R+ LF+R GVTPT Sbjct: 24 HNWTLAELRAFCLVCECRNLTQVALRLEMSQSAVSLMVQRWRLALGTTLFVRTRYGVTPT 83 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHY 143 AM L + + LE + AL +D + R + + + LP + + H Sbjct: 84 DAAMALRDKLHPLLEGMSLALANSRGFDPKTSERVFRLHMSDIGQLVFLPGLNSFLAQHA 143 Query: 144 PQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + L RN E LS + D+ I ++ V VL + V R +PL Sbjct: 144 PGIRLQIRNLAWEALEAGLSAGEVDVAIGSLPMIKGRVSSRVLRKERYVTAMRRRHPLAK 203 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 D A H+ + S + ++ R+I+ T + L ++ +SD L Sbjct: 204 RALDLAAFAAAEHMAIDATSSGHSLVESVMRSKGMQRRISLTMPHFLAAERILGSSDYLL 263 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +P F L +P P L D +H+++ S +D + + I + F Sbjct: 264 TVPEVAVMSFRDPSALHIVPTP-LELPTFDIRLHWHERSRQDQEIKWLRASITSLF 318 >UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RUJ7_SEROD Length = 313 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 119/298 (39%), Gaps = 6/298 (2%) Query: 22 IFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 + T + +N+L + AV + + +AA+ LN + +S+ + +LR F DPL +R G+ Sbjct: 1 MRTQFAALSINMLQVLHAVLTTRNLSHAAEKLNSSQPQLSRQLAQLREAFGDPLLVRHGR 60 Query: 82 GVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRA 138 + + + + + + L + ++ R A++ V +LP + Sbjct: 61 EYVLSPRGQEIILPLEKLINELKE-LSQKPEFEPLLCSRCFRFASSDYVAEHMLPQLVDY 119 Query: 139 IKTHYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 ++T P++ + + L+ + DL + ++ +L D V + + Sbjct: 120 LQTVAPKVSVEYFTWKPNDYPLLANAELDLATTMIKEAPSGLRGRILGEDVPVCVMSARH 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 L + + + HV + S + + ++E RQ+ T +V++S Sbjct: 180 VLAGKALEAKDYASWRHVRVSGGGDKDSFIDRELKEYGIYRQVALTVPFFSAAMEVVSSS 239 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++L IP + + + + +E + + +++ + P +V+R Sbjct: 240 NLLVTIPKHIAIMMAGKYNVTWCSI-DFVKESHRYWMIWHERTHMAPEHKWFRNVVRE 296 >UniRef50_P77746 Uncharacterized HTH-type transcriptional regulator ybdO n=94 Tax=Enterobacteriaceae RepID=YBDO_ECOLI Length = 300 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 6/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 L+ DLNLL IFE +Y H I AA+ L +TPSA+SQS+Q+LR F DPLFIR G+G+ Sbjct: 6 DLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIA 65 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYP 144 PT ++LH ++ + L + ++I + ++ I + ++ R ++ Sbjct: 66 PTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQD-S 124 Query: 145 QLLLRNPPI----SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 + + I +AE L + DL+I M +R+V L T LIC +P + Sbjct: 125 SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRI 184 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + E I L+ + ++ + E F +R+I+F ++LTI +A +D+L Sbjct: 185 TDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLL 244 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 I+P YN + L+++ I I YNK SL + + ID + +F Sbjct: 245 GIVPYELYNSYRDFLNLKEIKL-EHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF 300 >UniRef50_C5B758 Transcriptional regulator, LysR family, putative n=2 Tax=Edwardsiella RepID=C5B758_EDWI9 Length = 333 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 119/295 (40%), Gaps = 12/295 (4%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +D LL +F A+ + AA + L+ +A S+++ KLR +F D LF++ G G+ T Sbjct: 9 VDSELLALFRALAETGSLTQAAGRVGLSQAAASRALSKLRTVFQDLLFVKGGYGMQATPR 68 Query: 89 AMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L ++ L+++ L + +D Q RT+ + + ++ + +++ P Sbjct: 69 ARELMPRVTAALQALDH-LTMPYEFDPQTLRRTLYLGAVDNGVWMIFSRVVKSLFQQAPN 127 Query: 146 LLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL---- 200 + PI D + L + DL I + LF + R+G+PL Sbjct: 128 ARIEILPIGDDLFSSLKFGRMDLAIYPLIDIPADFHEANLFKTTFSCLVRQGHPLARQMQ 187 Query: 201 -SLEDDRETIDNAAHVLLL-PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 I+ + + + Q + + V D I + L ++A +D Sbjct: 188 CGEAPTLAQINAYRRLQVSLHDGQPGAVVGNAVHRQGKDYDIAMSVPYFLAAPMILAQTD 247 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + +P + FS+ L LP+P E + ++ DP++ + + Sbjct: 248 FVLTLPIQTARHFSQMANLAILPYPD-GETTFYTRLIWHHRVHHDPVIQWLRALF 301 >UniRef50_Q1YUH5 Nodulation protein d1 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUH5_9GAMM Length = 306 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 6/278 (2%) Query: 43 HKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES 102 K + +A+ L+L+ A+S ++++LR F DP+ + G+ + T A+ +H+ + L S Sbjct: 20 EKSVSRSAERLHLSQPAMSAALRRLREYFNDPILKQHGKRMVSTPHALIIHQELKVVLAS 79 Query: 103 ILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDA-EN 158 + + +D R TI + + ++ + R ++ P + L P +D+ Sbjct: 80 VEALISKTAFFDPATTSRKFTITASDYLAQVIFVPLIRHLRNVAPNIQLEIVPPADSTHE 139 Query: 159 QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLL- 217 LSQ DL+I + +LF D V++ + NP E + HV++ Sbjct: 140 LLSQGSIDLVILPEQMISDEFPSELLFEDRFVIVGCQSNPAFQQAMTEEAFYTSGHVVVK 199 Query: 218 LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPL 277 L + S Q+++ R + + L +V +D L ++ R N+F+ P+ Sbjct: 200 LGSRRPISVSDQQLESRKKSRDTDILVGSFLLAPEMVVGTDRLTVMHERLANIFATRVPI 259 Query: 278 EKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 P P + I + + DP + ++ I+ Sbjct: 260 VTAPLP-FSFPSIKEHVQVHSARSNDPGIQYILQKIKE 296 >UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B6V0_STRRD Length = 313 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 115/291 (39%), Gaps = 5/291 (1%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL +A+ + AA LN + A+S+++ ++R DP+ +R G+ + PT Sbjct: 2 LDLNLLVALDALLEEGSVAGAAARLNTSAPAMSRTLGRIRRQLNDPVLVRAGRHLVPTPR 61 Query: 89 AMHLHEYISQGLESILGALDI---EGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ LH + + L RT + + + + + + A+ P Sbjct: 62 ALELHAAVRDLVRQASALLVPAGDPAPATLARTFNLQASDMLLSALAAPLVLAVGQRAPG 121 Query: 146 LLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 ++LR P + + + L + + DL I + L T +V + RE +PL+ Sbjct: 122 VVLRFLPDTLEGTSALREGRVDLEIGVIDHAAPETCVEPLGTGRIVGMAREDHPLVIKGV 181 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 +A HV + + + + R+ T + L SD++ + P Sbjct: 182 TLRRFADAKHVGVSRHGRLHGPIDDLLAARGLRRRTAVTVSSHSMALLLARQSDLVCLAP 241 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + + L P L +++ ++ ++ + D + D +R Sbjct: 242 APADDDLPAALGLRAFEIP-LELPEVEVAMAWHPRNDADGGQRWLRDQVRE 291 >UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P5Q9_9ENTR Length = 305 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 125/301 (41%), Gaps = 13/301 (4%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR +DLN L + + + AA+ L + A+S ++ +LR +F DPL +R+ Sbjct: 1 MNNLRKLDLNQLVTLSVLLRERHVSRAAEALYKSQPAVSHALNQLRELFQDPLLVRRDGQ 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAIK 140 T+ A L +++ L + + QR IA + AL+ + ++ Sbjct: 61 YQLTSKAESLCIPLNEALNQLDDLIAQKQFNPLSCQRHFNIAMSDYGAALIAVKLVPYLR 120 Query: 141 THYPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + P + L+ + +N+L + DL + ++++ ++FTD V I P Sbjct: 121 KYAPDIDLKIWHCSREEMQNKLHEGSLDLAFGVFNTLDYSLRNQIVFTDKFVSIVD---P 177 Query: 199 LL--SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 + + D + H+L+ + + + + ++Q + R+I T L+ Sbjct: 178 QVCSQGKMDLIDWVSYPHILVSMKPFDANEIDHQLQLINQQRRIAVTVPYWQIAPQLLMG 237 Query: 257 SDMLAIIPSRFYNL-FSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++++ + + L S + L P P + F + +++ S D ++ + + I Sbjct: 238 TNLILTLAQKAIPLSMSDKFTLFTPPLP---LPDLVFQMIWHQRSDTDKAVYWLRETIVE 294 Query: 316 A 316 Sbjct: 295 L 295 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 333 4e-90 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 330 3e-89 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 329 8e-89 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 324 2e-87 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 324 2e-87 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 323 6e-87 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 322 1e-86 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 321 2e-86 UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 320 3e-86 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 319 1e-85 UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=B... 315 1e-84 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 315 2e-84 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 314 3e-84 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 311 1e-83 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 311 2e-83 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 311 3e-83 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 310 3e-83 UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=S... 310 4e-83 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 309 7e-83 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 308 2e-82 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 308 2e-82 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 308 2e-82 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 308 2e-82 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 308 3e-82 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 306 5e-82 UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=H... 306 5e-82 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 306 6e-82 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 306 7e-82 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 306 8e-82 UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=... 305 1e-81 UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=B... 305 1e-81 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 304 2e-81 UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=... 304 3e-81 UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=M... 304 3e-81 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 304 3e-81 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 303 4e-81 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 303 4e-81 UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteob... 303 5e-81 UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=B... 302 9e-81 UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vi... 302 1e-80 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 302 1e-80 UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia r... 302 1e-80 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 302 1e-80 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 302 1e-80 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 301 2e-80 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 301 2e-80 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 301 2e-80 UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=c... 301 2e-80 UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria Rep... 300 3e-80 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 300 5e-80 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 299 7e-80 UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=S... 299 8e-80 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 299 8e-80 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 299 9e-80 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 299 1e-79 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 298 1e-79 UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=A... 298 1e-79 UniRef50_P30979 Uncharacterized HTH-type transcriptional regulat... 298 2e-79 UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=... 298 2e-79 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 297 3e-79 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 297 3e-79 UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Bu... 297 3e-79 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 296 5e-79 UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=B... 296 5e-79 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 296 6e-79 UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=S... 295 1e-78 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 294 2e-78 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 294 2e-78 UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=P... 294 2e-78 UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator... 294 2e-78 UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=B... 294 3e-78 UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomona... 294 3e-78 UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteri... 294 3e-78 UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=... 294 3e-78 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 292 7e-78 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 292 8e-78 UniRef50_A4Z170 Putative transcriptional regulatory protein, Lys... 292 8e-78 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 292 1e-77 UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n... 292 1e-77 UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=P... 291 2e-77 UniRef50_C5AL93 Transcriptional regulator, LysR family protein n... 291 2e-77 UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=G... 291 2e-77 UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogo... 291 3e-77 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 290 4e-77 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 290 4e-77 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 290 4e-77 UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding... 290 4e-77 UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=S... 290 5e-77 UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=P... 288 2e-76 UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=O... 288 2e-76 UniRef50_B7CP85 Transcriptional regulator, LysR family protein n... 288 2e-76 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 287 2e-76 UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=P... 287 3e-76 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 287 3e-76 UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=So... 287 3e-76 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 287 4e-76 UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n... 287 4e-76 UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=V... 287 4e-76 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 287 5e-76 UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=A... 286 6e-76 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 286 6e-76 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 286 7e-76 UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=... 286 7e-76 UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=B... 286 7e-76 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 286 1e-75 UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=... 286 1e-75 UniRef50_B7RV99 Transcriptional regulator, LysR family protein n... 285 1e-75 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 285 1e-75 UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=c... 285 1e-75 UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=c... 285 1e-75 UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans... 285 1e-75 UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n... 285 2e-75 UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=R... 285 2e-75 UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=P... 284 2e-75 UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=A... 284 2e-75 UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales ba... 284 3e-75 UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=M... 284 4e-75 UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=V... 284 4e-75 UniRef50_A6FY23 Transcriptional regulator, LysR family protein n... 284 4e-75 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 283 4e-75 UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=M... 283 5e-75 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 283 5e-75 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 283 5e-75 UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Ag... 283 6e-75 UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serra... 283 6e-75 UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gamma... 283 7e-75 UniRef50_A7JRS0 Possible LysR family transcriptional regulator n... 282 8e-75 UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=A... 282 9e-75 UniRef50_P52679 PCP degradation transcriptional activation prote... 282 1e-74 UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=B... 282 1e-74 UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=B... 282 1e-74 UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=... 282 1e-74 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 282 2e-74 UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=H... 281 2e-74 UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=S... 281 2e-74 UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=P... 281 2e-74 UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=G... 281 2e-74 UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=H... 281 2e-74 UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=M... 281 2e-74 UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=V... 281 3e-74 UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=... 281 3e-74 UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax... 280 4e-74 UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=B... 280 4e-74 UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=... 279 6e-74 UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter ... 279 9e-74 UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=V... 279 1e-73 UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=N... 278 1e-73 UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium ... 278 2e-73 UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=A... 277 3e-73 UniRef50_A3YI62 Transcriptional regulator, LysR family protein n... 277 3e-73 UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=A... 277 4e-73 UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=... 277 4e-73 UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=E... 277 5e-73 UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding... 276 5e-73 UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=... 276 6e-73 UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative... 276 7e-73 UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=... 276 8e-73 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 276 8e-73 UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=... 276 9e-73 UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibri... 276 1e-72 UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n... 276 1e-72 UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=... 276 1e-72 UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vi... 275 1e-72 UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=V... 275 1e-72 UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=P... 275 2e-72 UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=A... 275 2e-72 UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas ma... 275 2e-72 UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejue... 274 2e-72 UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n... 274 3e-72 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 274 3e-72 UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria ... 274 3e-72 UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseo... 274 3e-72 UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=... 274 3e-72 UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=V... 274 4e-72 UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=P... 274 4e-72 UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Ta... 273 4e-72 UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=P... 273 4e-72 UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobac... 273 5e-72 UniRef50_A1R1P0 Putative transcriptional regulator, LysR family ... 273 5e-72 UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholde... 273 5e-72 UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1... 272 8e-72 UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=R... 272 9e-72 UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=A... 272 9e-72 UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=I... 272 1e-71 UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=V... 272 1e-71 UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=P... 272 1e-71 UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding... 272 1e-71 UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Ac... 272 1e-71 UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=R... 272 2e-71 UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobact... 272 2e-71 UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=R... 271 2e-71 UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteoba... 271 2e-71 UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=B... 271 2e-71 UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=D... 271 2e-71 UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=A... 271 3e-71 UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=D... 271 3e-71 UniRef50_A9R140 Substrate-binding transcriptional regulator, Lys... 271 3e-71 UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1... 270 4e-71 UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=P... 270 4e-71 UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=P... 270 5e-71 UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=S... 270 5e-71 UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales R... 270 6e-71 UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR fam... 269 6e-71 UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family ... 269 7e-71 UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=A... 269 1e-70 UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=S... 269 1e-70 UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=G... 269 1e-70 UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=R... 268 2e-70 UniRef50_B9K150 Transcriptional regulator LysR family n=1 Tax=Ag... 268 2e-70 UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=E... 268 2e-70 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 268 2e-70 UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobac... 267 3e-70 UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=B... 267 3e-70 UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=K... 267 3e-70 UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=P... 267 4e-70 UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhod... 267 4e-70 UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae ... 267 5e-70 UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=... 266 5e-70 UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=D... 266 6e-70 UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha pro... 266 6e-70 UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding... 266 8e-70 UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=... 266 9e-70 UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=S... 266 9e-70 UniRef50_B3YF82 Transcriptional regulator, LysR family n=2 Tax=S... 266 1e-69 UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=C... 266 1e-69 UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorh... 266 1e-69 UniRef50_A6GE91 Probable transcription regulator protein n=1 Tax... 266 1e-69 UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=G... 265 1e-69 UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=B... 265 2e-69 UniRef50_B1MJW3 Putative transcriptional regulator, LysR family ... 264 2e-69 UniRef50_Q15XK7 Transcriptional regulator, LysR family n=1 Tax=P... 264 3e-69 UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=A... 264 3e-69 UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=B... 264 3e-69 UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=M... 264 3e-69 UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae ... 264 4e-69 UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=L... 264 4e-69 UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=H... 264 4e-69 UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales Re... 263 5e-69 UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhiz... 263 5e-69 UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=S... 262 1e-68 UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=... 262 1e-68 UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=P... 262 1e-68 UniRef50_C4V039 Transcriptional regulator, LysR family n=4 Tax=E... 262 1e-68 UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=K... 262 1e-68 UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 ... 262 1e-68 UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=S... 262 1e-68 UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n... 262 2e-68 UniRef50_A3VA58 Transcriptional regulatory protein n=2 Tax=cellu... 262 2e-68 UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=A... 261 2e-68 UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=P... 261 2e-68 Sequences not found previously or not previously below threshold: >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 333 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 122/300 (40%), Gaps = 6/300 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + +IDLNLL +F+A+ AA+ + LT A+S ++ +LR +F DPLF+R Sbjct: 1 MKPVNIASIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSP 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYR 137 +G+ T A+ I LE + L +++ + R + + ++LP + Sbjct: 61 RGMVATPAALDAAPAIRSILEQVEVVLSGGPAFEPEESTRQFVLGLSDYAAFVLLPRLTA 120 Query: 138 AIKTHYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 ++ P + L S L + +LI N ++ +L+ ++ V R Sbjct: 121 RLEREAPNISLVIRNTSHGVGLPMLEEGSVELIAGNFPGPPSHMREELLYEEDFVCAGRG 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +P L+ D + + H+ + + + E R++ T + L LV Sbjct: 181 DHPALAYPLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVTVGHFLMAPFLVD 240 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +SD++A P R + PL P ++ ++ DP + V+R Sbjct: 241 SSDLVATEPRRLFEPMPSRLPLRFFA-PPIDLPPFRVVQAWHARHEADPGHQWLRRVLRE 299 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 330 bits (848), Expect = 3e-89, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 8/301 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + ++DLNLL F+A+ + + +AA L ++ A+S ++ +LR+IF DPLF+R QG+ Sbjct: 1 MNIASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT +A L E +S+ E I AL I +D +T + T L+LP + + I+ Sbjct: 61 QPTPYAEQLIEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKHIQ 120 Query: 141 THYPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + +R P A+ ++ + DL + L+TD I R+G+P Sbjct: 121 VAAPNACVRVRRIPEQGAKEAMANGEIDLAVGLFPYLKAGFYQQRLYTDKFACIVRQGHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNF-SGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + + + HV+++ + + + + R+I TS N L + ++ + Sbjct: 181 TVHDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHLRRKIVMTSQNFLVLPMIIEQT 240 Query: 258 DMLAIIPSRFYNLFSRCW-PLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 D +A IP R + ++ L P + +D H+++ DP + D++ Sbjct: 241 DAIATIPFRMAQKIASYSTGIKILESP-IPFPNVDIKQHWHERFHYDPANKWMRDLMVTL 299 Query: 317 F 317 F Sbjct: 300 F 300 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 329 bits (845), Expect = 8e-89, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 116/295 (39%), Gaps = 5/295 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++ D+ LL +F+ +Y + + AA L L A+S ++ KLR F DPLF+R G+ P Sbjct: 1 MQTADVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A L + Q L+++ +D +RT I+ T ++LP ++ ++ Sbjct: 61 TPMARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKT 120 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + + P+S + L + DL + M LF V + +P + Sbjct: 121 SPGVHIDIVPLSAETPRMLETGEADLALGFMPQLEAGFYQQSLFRQRYVCVASTDHPRIH 180 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 E + H ++ L + + R I N L IA +V +DML Sbjct: 181 DELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIAFVVEQTDMLV 240 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 IP R + P P H+++ DP + VI + Sbjct: 241 TIPERLAQVLEGRGRFRVFPVP-FELPDYAVKQHWHERYHHDPGNRWLRRVISDL 294 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 324 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 134/299 (44%), Gaps = 10/299 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L +DLNL +F+A+Y + A +++ +T A+S ++ +LR F DPLF+R QG+ Sbjct: 1 MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 PT A ++ + L + ++ ++ + T I+ T A++LP +++ ++ Sbjct: 61 VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQRLR 120 Query: 141 THYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P +++ + +L+ + D +D T+ V+H L D V R+G+P Sbjct: 121 RLAPTVIIESFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCAMRKGHP 180 Query: 199 LL-SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 L + + + H+ + + + +M R+I S + L + ++ + Sbjct: 181 LATKEKFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKIALRSQHYLMASQVLQQT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 DM+ +P RF L P + ++ +++++ + +DP + + + Sbjct: 241 DMVMTVPERFAR----RHDLHAFNLPVNDVPPVETHLYWHESTDQDPANRWMREQMIEL 295 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 324 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 135/300 (45%), Gaps = 7/300 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 F + ++DLNL+ + A+ + + A K L LT SA S ++ +LR +F DPLF+R +G Sbjct: 60 FHDVASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRTSRG 119 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAI 139 + PTA A L E + + + ++ E + R+ ++AT ++ P + + Sbjct: 120 LAPTARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATADYGSFVLAPKLLDRL 179 Query: 140 KTHYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMF--CTNRTVQHHVLFTDNMVLICREG 196 P + L + E QL++ D+++ + +L+ + + R+G Sbjct: 180 GREAPNVDLWLRALDASFEEQLARGDADVVVAPARRDGLPAGIHSRLLYRERFACLVRKG 239 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +PL+ D + + HV + P + + + ++ R++ + L +VA Sbjct: 240 HPLVKKGIDLASWTSMRHVFIAPRGTPGGVVDETLAQLGKRRRVALAVPHFLLAPHVVAG 299 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 SD++ + +R F+ PL + P + + +++++ RDP D +R A Sbjct: 300 SDLVVTVGARVAEAFAEILPLRVVD-PPVKLPGFEVRMYWHERHHRDPAQQWFRDAVRGA 358 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 323 bits (828), Expect = 6e-87, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 145/294 (49%), Gaps = 7/294 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +RNIDLNLL IF+A+ I AA+ L++T A+S ++ ++R ++ DPLF++ G+G+ P Sbjct: 1 MRNIDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L +S L + A++ + +D +R + + L+ + R ++T Sbjct: 61 TTHALSLWHQVSGPLIQLKDAVNPQD-FDPSTTRRRFRVGMSDITTDLIWLPMRRMVETE 119 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L P + ++E+ L+ + DLI+ M + ++ LF + V R+ +PL Sbjct: 120 APNIDLHAVPANGNNSESILTNGEVDLIVGVMQEFRTSFRNDFLFESDYVCAMRKDHPLA 179 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + E A H+L+ + + + + R++ T + ++ AL+ SD++ Sbjct: 180 AEPLTLEKYLKADHLLVSLTGEATGFVDITLSQQGLSRRVAMTVNHFASVPALLEGSDLI 239 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +I+P+ ++C L P L S+ ++ RDP + + + I+ Sbjct: 240 SIVPNMVIAKGAKCGSLHVTK-PPLEIRPTPVSMIWHARHDRDPGVLWLREKIK 292 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 129/299 (43%), Gaps = 6/299 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLL +F + V + + A+ L LT A+S ++++LR DPLF+R QG+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT +A HL E ++ + ++ AL S+D +RT T+A T +P + + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 141 THYPQLLLRNPPISDA--ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P ++ S L DL + + L ++ V +CR+ +P Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQRRLLQNHYVCLCRKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E + HV ++ + + + R I + + ++ +D Sbjct: 181 VTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGHILQRTD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +LA +P R + + L LP P + +I ++ ++ +D + ++ + F Sbjct: 241 LLATVPIRLADCCVEPFGLSALPHPVV-LPEIAINMFWHAKYHKDLANIWLRQLMFDLF 298 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 321 bits (823), Expect = 2e-86, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 127/295 (43%), Gaps = 5/295 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR DLNLL + + + + A+ L L+ A+S ++ +LR DP+ +R G + Sbjct: 1 MDLRGFDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A L E + + +I L +D RT IAT +++P + ++ Sbjct: 61 VPTPRAEQLVEPVQAIVSAIEQTLADPQPFDYSSISRTFRIATNDYGAFVLVPFLMNRMQ 120 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P L I+ D E L + + DL+I + + LF++ + R+ +P Sbjct: 121 KIAPHLTFEIWDIALDVETALREGEIDLVIADAWTLRNCKCRKTLFSETFTCLVRQNHPR 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + + + H L+ + + + + RQ+ T +IL I A++A +DM Sbjct: 181 VDTQLTMDDYLQEKHALVSARGRVTGNVDIALSQQNKQRQVQITLPHILAIPAMMAATDM 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + + +R N F+ + L+ P P + + D ++ + D + + + + Sbjct: 241 IVTVATRIANRFAVDYHLQTFP-PPITLDGFDIAMAWPHRMDNDTAIRWLRNELV 294 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 320 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 130/292 (44%), Gaps = 6/292 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + DLNLL F+A++ + + AA+ LN+T A+S ++ +LR F D LFIR GV PT Sbjct: 3 KKFDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPT 62 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHY 143 + + + L + L S+D +RT I +VLP + ++ Sbjct: 63 ERCSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKA 122 Query: 144 PQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P++ LR P + + + L D + + + + + + VLI R +P + Sbjct: 123 PRVDLRISPVKLGETYDALDSGDLDFLFFSGTEPPKRINFSPMLEEKFVLIMRANHPKMC 182 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 E + + H++ + + + + E R++ TS + +IA V ++DM+A Sbjct: 183 QEMTLDAYADLTHIVFSTRGDSHTRIDDLLAENGLRRRVALTSSHHTSIAETVRDTDMVA 242 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + PSR + + L + P + +++++ DP + +++ Sbjct: 243 LSPSRLAHRYVHRGGLIAVQ-PPVEFPHFHLRLYWSRRLNSDPGAMWLRNIL 293 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 134/299 (44%), Gaps = 7/299 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +R +DLNLL +F+A+ + + A + L+ A+S ++ KLR +F DPLF+R G+G+ Sbjct: 1 MDIRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A L E +++ L+ + + + R + + + LP + + Sbjct: 61 EPTPRAQALGEPVARLLDLVQTEILPMPEFRPAESSRNFVLCMSDIGEMVFLPRLESFLD 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCT-NRTVQHHVLFTDNMVLICREGN 197 P + ++ +S + E L+ DL I + +++ L+ + V I R+ + Sbjct: 121 KAAPHVSIKTVALSMPELEEGLASGDVDLAIGYFPGLNSESLKRKALYRHSYVCIARDDH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P + + AAHV++ PE + L + + + + F++ + + +VA S Sbjct: 181 PEIGDTLSLDQYRAAAHVMVHPEGREQDVLARTHERLGIRVNVRFSTPRFIGVPFVVAGS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 DM+A +P F+ ++ LP P + +H++ +P + D + Sbjct: 241 DMIAAVPQAVGRRFAEFVNVKLLPLP-FPAPTYELYLHWHPRFHHEPANRWIRDAMSEL 298 >UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q5P743_AZOSE Length = 301 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 118/295 (40%), Gaps = 5/295 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +++ L++F+ +Y + + AA+ L L A+S ++ KLR F DPLF+R G+ P Sbjct: 1 METLEIRQLSVFDEIYKTRSVSRAAENLGLGQPAVSIALGKLREHFGDPLFVRTSAGMEP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T L E I + ++ A +D +RT IA T ++LP ++ ++T Sbjct: 61 TPLGEELAEPIRVAVAAVSAASGHRAEFDPTRARRTFRIAMTDISQLVLLPRLWERLRTV 120 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + + +S + L + D+ + M LF + V + +P + Sbjct: 121 APGIHIDIANLSANTAGMLESGEVDVALGFMPQLEAGFYQQALFRQHYVCMASATHPRIR 180 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + H ++ + + + R++ + + IA +V + +L Sbjct: 181 RGLTLAQFEAEEHAVVSTSGTGHLIIDREIARQDIKRRVVLRIPSFVGIAYVVERTALLV 240 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 IP R L + L P P + H++ DP + +I+ Sbjct: 241 TIPQRLGELLADEERLRVYPVP-FPLPEYAVKQHWHGRYNNDPGNRWLRALIQEL 294 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 130/299 (43%), Gaps = 6/299 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L IDLNL +F+A+Y I AA+ LNLT A+S ++ +LR +F DPLF R+G Sbjct: 1 MGAMQLSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYR 137 QG+ PT A L + L+S L +D R TI ++ + +LP + Sbjct: 61 QGMAPTPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTIGMRDALESTLLPPLMA 120 Query: 138 AIKTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 + + PQ+ + + E++L D ID + + + H D M+++ R Sbjct: 121 RVTSVAPQVEIAAIRFDRREMESELLAGTIDAAIDILLPVSPAIHHAQFMADPMIVLARR 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +PL+ E E A HV + + Q + M R++ + +V+ Sbjct: 181 DHPLVKKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHYAAACRVVS 240 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +D+LA +P R+ + + + L P ++ ++++ D + + + Sbjct: 241 CTDLLATLPLRYARIANEPYANRILSLP-FKVPSLELHLYWHAGGENDGANRWLREQLM 298 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 4/291 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L DLNLL F+A+ +G+ A + L +T +A+S ++++LR F DPLFI+ G + P Sbjct: 9 LNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGARMEP 68 Query: 86 TAFAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 T AM L I L+ + ALD + + LV P + ++ + Sbjct: 69 TPRAMELSGMIEAALKQVHVALDNDSFDPANSHYVFRVGMVDYTVPLVFPALLDHLEKYA 128 Query: 144 PQLLLRNPPISDAE-NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 P +L D E L + DL++ + R ++ V+ V I R G+PL+ Sbjct: 129 PNCILEVVNTGDFEGEMLESGEVDLVLSRLDQAPRGLKSRVVGEIPFVCIYRPGHPLIKE 188 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 E A HV P + ++ + +R + + + LVA +D++A Sbjct: 189 PMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDSFGMVPTLVAETDLIAA 248 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + ++ + L+ P P + F + ++ S + + Sbjct: 249 VTHTSAHVIAPAMGLKVQPLP-FEAPPLQFVMVWHDRSEESAPHQWFREQV 298 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 311 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 6/298 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + IDLNL +F+A+Y GI A++VL+LT A+S ++ +LR D LFIR +G+ Sbjct: 1 MHISRIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 TPT +A L + Q L + L + + + + L+LP + + + Sbjct: 61 TPTPYAHQLIGTVRQALNQLQRGLHQGQEFAPAQLETSFRLCVRDLFDVLLLPALIKNCR 120 Query: 141 THYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P+++ P + L+ + DL D + + ++ H LF D + + R +P Sbjct: 121 AIAPKVVFNCLRSPREQILHDLASGRIDLAADVLISHDDSICHEKLFEDRLTCLLRRDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L+ E + HV + E ++ R++ + N A ANSD Sbjct: 181 ALASEWSLAEMLRWPHVQVSSREHGPGYEDIQLSRHGLQRKLGLRTPNFYGAALTAANSD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 ++ P + ++ PL+ +PFP L ++ +++++ + R+P + + + A Sbjct: 241 LILCAPEQVARKLTQTIPLQVMPFP-LTLNPLETYLYWHRSTDREPAHIWLREQTQRA 297 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 7/300 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L+N+DLNLL +F+A++ + + A ++L ++ A+S ++ +LR +F DP+F+R + Sbjct: 1 MNLKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A L + + L I + +D +RT+T+ LP + + Sbjct: 61 RPTDRASELMPSVERVLSMIRDDVLQPVGFDPAANRRTLTLCMPDIGEQYFLPPLINHLA 120 Query: 141 THYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRT-VQHHVLFTDNMVLICREGN 197 P + + + E L + DL I R LF R+G+ Sbjct: 121 QVAPGMAVVSHELAPAQLEEALESGRVDLAIGYFPDLRRAVFYQQRLFYSGFCCAVRQGH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P + A HV ++ Q ++E R + + + L++ ++A + Sbjct: 181 PQIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIVRNVKLQTSHFLSLTQIIAQT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 D+LA + L + P P Q ++++ + D + IR F Sbjct: 241 DLLATVTYEAAQLLQAAGKVHIYPVP-FPIPQFPVMQYWHERAHHDRGNQWLRGEIRGLF 299 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 127/312 (40%), Gaps = 17/312 (5%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 R +DLNLL +F+ V + + AA+ L +T A+S ++++LR + D L R+G Sbjct: 1 MQPLNFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRA 138 GV PT A+ L + L + L Q T +A + GA ++P + Sbjct: 61 HGVEPTPRALALWPAVRHALAQLQETLSPGRFDPASAQTTFVLAMADATGATLIPPLIEI 120 Query: 139 IKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTV------------QHHVL 184 ++ P + LR P++ D L + D+ + + + L Sbjct: 121 VEREAPGVSLRVVPLTTRDPRRLLDEESADMAVGYFPAVLADLTARAQSDNVVAHESTRL 180 Query: 185 FTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTS 244 + V + R +PL ++ + A H+L+ + F + + + +R+I T Sbjct: 181 YDSQYVCVMRADHPLAAVPMTLDLYCAARHLLVSFSGKPFGFIDGALAALGRERRIVLTV 240 Query: 245 YNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 T +VA +D+L ++P F + S L P P + + +++ DP Sbjct: 241 NQFFTAGRVVATTDLLTVLPRHFVGVASVRDELVWRPLP-MTLPPVHVDALWHRRRNHDP 299 Query: 305 ILHGVIDVIRNA 316 + + I A Sbjct: 300 AHRWLREAIARA 311 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 310 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 6/293 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 DLNLL +F A+ + + AA+ L +T A+S ++ +LR DPLFIR+ G+ PT Sbjct: 2 KYDLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTE 61 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 A L I L S+ + + ++D R TIA V +++PVI ++ P Sbjct: 62 MAEALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRECAP 121 Query: 145 QLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + LR P + AE T++++ + + L D + + R+ +P ++ Sbjct: 122 GIRLRLTPFGNDLAETGAMSGATEMVLGRIVEPPDNMVVQHLMDDGLACVVRKDHPEIAE 181 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 E HV +LP + GL Q +Q+ R ++ + + L + +VA +D A Sbjct: 182 SISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPEMVAVTDYCAT 241 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +P + +R L+ LP P ++ + + ++ DP + +I Sbjct: 242 LPRLICHRLARDPRLKVLPAP-VDLGRFPVELAWHVRYRNDPAHRWLRSLISE 293 >UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLW1_SORC5 Length = 315 Score = 310 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 117/277 (42%), Gaps = 5/277 (1%) Query: 43 HKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES 102 + AA + L+ SA+S ++ +LRV+ DP+ +R +G+ PT A L I + L Sbjct: 35 EGSVTRAAARVGLSQSAMSHALGRLRVLIDDPVLVRTPRGMIPTPRAQELIGPIREALAK 94 Query: 103 ILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPIS-DAEN 158 I + ++ +R+ T+AT V ++LP + + + + P + L P + + Sbjct: 95 IEATVARSPRFEPATARRSFTVATVDYVELILLPRLVQKLVSEAPFIDLVARPYDSEMWS 154 Query: 159 QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLL 218 + + DL I + L + + + R +P + + +T + H L+ Sbjct: 155 AMETGKVDLAIGLLPALPAGFYRQRLIEERYMCVVRRSHPAVRGKLTLKTYTSLPHALIS 214 Query: 219 PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLE 278 P + + + + E R++ + L A +VA +D++ +P+R +F+ L Sbjct: 215 PRGEGGGRVDEVLAERGLSRRVALQIPHFLVAAHIVAQTDLVLTVPARIARVFAEMEELH 274 Query: 279 KLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + P + +++ +DP + V Sbjct: 275 VMK-PPVELGGFSVDQVWHERHAKDPAHTWLRGVFAE 310 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 309 bits (794), Expect = 7e-83, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 121/306 (39%), Gaps = 17/306 (5%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL + + + + AA L +T A+S +++LR +F DPL +R +G+ Sbjct: 1 MDISRVDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIK 140 T T A L + L I A+ + + + QR I + + ++P + R I+ Sbjct: 61 TATERARELQPLVRGILSDIEQAVQEKTPFAAGESQRVFRIMASDYAESCLMPRVLRRIR 120 Query: 141 THYPQLLLRNPPISDA-ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + L SD + Q + D+ I+ ++ L+T+ + NP+ Sbjct: 121 QEAPHVTLDVLTPSDVSFLDVEQGRLDMAINRFDKIPQSFHQKTLWTEYFACLMNARNPI 180 Query: 200 LSLEDDRETIDNAAHVLLLPEE------------QNFSGLRQRVQEMFPDRQINFTSYNI 247 L +T +A+H+ + Q + + + M RQI+ + + Sbjct: 181 LKEPFTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALGRMGRKRQISVFTRHY 240 Query: 248 LTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILH 307 L D++A +PSR L L + P + + ++ + Sbjct: 241 QVAMLLAEQHDLIATLPSRAAWLQKDNPNL-VVKVPPFEIPPFELKMAWSPLLQHNSDHQ 299 Query: 308 GVIDVI 313 + +I Sbjct: 300 WLRKLI 305 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 117/300 (39%), Gaps = 6/300 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 LR++DLNLL FEA+ + + A+ L + + S ++++LR + DPLF+R Sbjct: 2 ANIDRADLRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFVR 61 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVI 135 G+ PT A+ L E I L SI L S+D +R I V A++ + Sbjct: 62 TPAGMIPTPHALALAEPIRAILTSIERTLFARASFDPRAERRVFRIGAMDYVQAVIADPL 121 Query: 136 YRAIKTHYPQLL--LRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 ++ P L A L++ + DL I +L+ + + Sbjct: 122 LAVLQAQAPGCKLILTTTDCDTAGRSLARGEIDLAIGAFPQIKAGSHQELLYRERYECVF 181 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 L R HV++ L ++ R++ ++ N L I L Sbjct: 182 DAKACRLGKRVTRAQWLALPHVIMSVHGDYSGPLDDVLKSSGEQREVAVSTPNFLAIPFL 241 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + N ++A +PSR F L P P D ++ ++ + +P + D I Sbjct: 242 LRNKRLIAALPSRMARAFCGRLGLSTCPLP-FTAPTFDVTMIWHARTGDEPGAAWLRDQI 300 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 6/293 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LR+IDLNLL +F+A+ + AA+ L ++ AIS ++Q+LR F D LF+R G+T Sbjct: 4 NLRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHHGMT 63 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PT A LH+ + L ++ L+ E +D QR I + +VL + ++ Sbjct: 64 PTPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLATLRQ 123 Query: 142 HYPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P ++L D ++L + + DL +D + +Q +VL + +V+I R +P + Sbjct: 124 QAPHVVLEIIAADDDMPDELHKGRADLSVDAFVADDDRLQRNVLLEEKLVVIARRSHPHI 183 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 D++ +A HV+L P L Q + R+ ++ A+ SD++ Sbjct: 184 KGHCDKQQFLDAEHVVL-PNRNRQLPLDQILNAPGWQRRTGARVTQFASMLAVCGGSDLI 242 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 A +P R ++ L+ LPFP + + + ++ RDP + + Sbjct: 243 ATVPDRLAQQYAETMQLQVLPFP-VALPPVPIYMIWSPTQQRDPAHRWLRQQL 294 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 6/281 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLL +F + V + + A+ L LT A+S ++++LR DPLF+R QG+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT +A HL E ++ + ++ AL S+D +RT T+A T +P + + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 141 THYPQLLLRNPPISDA--ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P ++ S L DL + + L ++ V +CR+ +P Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQRRLLQNHYVCLCRKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E + HV ++ + + + R I + + ++ +D Sbjct: 181 VTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGHILQRTD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKF 299 +LA +P R + + L LP P + +I ++ ++ Sbjct: 241 LLATVPIRLADCCVEPFGLSALPHPVV-LPEIAINMFWHAK 280 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 137/327 (41%), Gaps = 17/327 (5%) Query: 6 QIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQ 65 I+ ++ +P T R +DLNLL +F+ V + + AA+ L+LT A+S +++ Sbjct: 10 SIQTMPPGPLTKERPLNPTNFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALR 69 Query: 66 KLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIAT 123 +LR D L R GQG+ PT A + + + L+ + +L D T +A Sbjct: 70 RLRETLGDELVQRSGQGMAPTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAM 129 Query: 124 TPSVGALVLPVIYRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRT--- 178 + A ++P + ++ P + +R P++ D L + DL + Sbjct: 130 ADATAAELIPGLIETLEQEAPGVSMRVIPLTTRDPRRLLDEQACDLAVGYFPSVLADLTA 189 Query: 179 ---------VQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQ 229 QH L+ V + R+G+PL S + A H+L+ + + + + Sbjct: 190 HAQSGEPMPFQHRRLYDGEYVCVMRKGHPLASGPLTLDRFCAARHMLVSFSGRPYGFIDE 249 Query: 230 RVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQ 289 + + +RQ+ T T +VANS++L ++P F + L P P + Sbjct: 250 SLASLGRERQVVLTVNQFFTAGRVVANSNLLTVLPRHFVRVTGIAEQLVLRPLP-FDVSA 308 Query: 290 IDFSIHYNKFSLRDPILHGVIDVIRNA 316 + +++ S + + + + A Sbjct: 309 VHVDAVWHRRSQQRGAHVWLREAVLRA 335 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 127/315 (40%), Gaps = 8/315 (2%) Query: 10 CLSRKSSEGK-PQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLR 68 C S KS I R DLNLL F A+ + + AA+ L L A+S ++++LR Sbjct: 5 CPSIKSFNVMANIIENDFRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLR 64 Query: 69 VIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTP 125 F D LF+R QG+TPT A+ L I L+S+ AL +D QR I + Sbjct: 65 ETFGDELFVRTPQGMTPTPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSD 124 Query: 126 SVGALVLPVIYRAIKTHYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHV 183 S+ L++P I + P + L R+ + A L +L + + Sbjct: 125 SLELLLMPEIMARLAAAAPGVKLIARSTDSTRAAAMLDDGAIELAVGVFRECVPWQRLMP 184 Query: 184 LFTDNMVLICREGNPLLSLE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINF 242 LF+ V + + + HVL + + +R++ +R++ F Sbjct: 185 LFSWRFVSVYNPQLVRTRRKHLSMDEFLRHRHVLTSFSAELRGFIDERLELQGLNREVVF 244 Query: 243 TSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLR 302 +S N T +V + +A +P ++ L P P + S+ + + Sbjct: 245 SSSNFATSPFIVQRTAAIATVPEFIGRVWRDTLGLALSPLP-FEVPGYEVSLMWAAAHDQ 303 Query: 303 DPILHGVIDVIRNAF 317 DP L + +AF Sbjct: 304 DPALAWLKREFADAF 318 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 306 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 124/298 (41%), Gaps = 11/298 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L IDLNL +F+A+Y + AA VL +T A+S S+ +LR + DPLF+R G + Sbjct: 1 MNLNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 TPT A ++ + L + ++ ++D + A + A ++P + ++ Sbjct: 61 TPTPAAQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFAARDLLEASIMPRLTAQLQ 120 Query: 141 THYPQLLLRN--PPISDAENQLSQFQTDL-IIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 P + L N S+ + ++ D + + + + D V+I R + Sbjct: 121 NVAPNITLTNYDISRSNIVSAMASGSLDFYADASSAFVDPHLCKQKIAEDRFVVIARRNH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P LS + +T H+ + + + ++ R++ + LT+ A++ + Sbjct: 181 PALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFLTVPAVIVKT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 D++A +P + P +++ ++++ + D + + I Sbjct: 241 DLIACVPYHLAKHY----DCSIYELP-FELAPVEYFLYWHVSADHDHAHMWLREQIAE 293 >UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKM3_HALO1 Length = 307 Score = 306 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 113/300 (37%), Gaps = 7/300 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L I+LNLL +A+ + + AA+ ++ A+SQS+++LR IF D L R Sbjct: 1 MSGPRLSEINLNLLVSLDALLTERSVSRAARRTGVSQPAMSQSLRQLRAIFDDALLARDR 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 + T A L + L ++ LD E +D +R TIA +LP + Sbjct: 61 GVLVLTPAAERLMVPLRHALVAVQRVLDGEKPFDPGRAERRFTIAVGDFAAVTLLPPLLE 120 Query: 138 AIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 P + P +L+ + DL+I + +L+ D V + R Sbjct: 121 RASREAPGIGFDVRPAEPTRLFERLATGEFDLVIGAKLDASGDFMRQLLYRDGFVCMARR 180 Query: 196 GNP-LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 +P L D E HVL+ P + S + + + E R+I L +V Sbjct: 181 DHPELSGDALDLERYAALPHVLISPTGEGPSVVDRLLAERGKQRRIALRIPYFLAAPLMV 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 SD++ P F+ L P L +++ D + +++ Sbjct: 241 VRSDLVLTAPRSVAGAFASTHALALFE-PPLELPSFGVYQLWHQRYQSDDAHRWLRELVA 299 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 306 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 128/294 (43%), Gaps = 8/294 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL +FEAVY + + A+K LNLT A+S ++++LR F DPLFIR G+ PT Sbjct: 1 MDLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTDL 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L + LE + + S+D R I+ + G LVLP + + + P Sbjct: 61 AEQLAGRVLDALEMLRS-FESRESFDPAGLSRDFRISISDYNGMLVLPRLLKELAEQAPG 119 Query: 146 LLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + + I A LS Q DL++ + + L++D+ V + + Sbjct: 120 VSITTSQIQRAHVSEHLSTGQVDLVLAPKQDV-ANLSYEPLYSDDYVGVASAHYGPEGGQ 178 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAII 263 E H+L E S + + ++ R++ S ++ TI ++ S +A + Sbjct: 179 MSLEEYCQREHLLFSLEGYGRSTVDVALSKLGKKRKVVLRSSHVHTIPHVLEGSAFIATL 238 Query: 264 PSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 P + + + L P + + +H++ DP + +I+ F Sbjct: 239 PRLITLDYLKRFELTSFSLP-FELKGHEVGLHWHARQHHDPAHEWLRGLIKELF 291 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 306 bits (785), Expect = 7e-82, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 118/293 (40%), Gaps = 5/293 (1%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +D+ LL++F+ +Y + + A + L L +++S ++ +LR F D LF+R +G+ PT Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L + Q LE + A + +D R +A T LP + + P+ Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAPK 120 Query: 146 LLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + + I+ D L DL I M + LF D + R +P + Sbjct: 121 VRVEVLRITADTARLLEAGDADLAIGYMPELDAGFYQQKLFRDGFACVVRRTHPRIDDNL 180 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 HV++ + Q ++ R + + + + L+A++D++A +P Sbjct: 181 TMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLLAHTDLIATVP 240 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 R + ++ + P + H+++ +DP + + F Sbjct: 241 HRIAQTLVKIAQVKAIASPY-RLPEFAIKQHWHERYQQDPANRWLRSTLAELF 292 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 306 bits (784), Expect = 8e-82, Method: Composition-based stats. Identities = 73/306 (23%), Positives = 140/306 (45%), Gaps = 9/306 (2%) Query: 17 EGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLF 76 +L +DLNLL +F+A+ + + A + L L+ AIS S+ +LR +F DPLF Sbjct: 6 NRMDIWMNSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLF 65 Query: 77 IRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLP 133 IR G+ PT A+ L +++ L+++ AL +D RT ++ + + LP Sbjct: 66 IRTRAGMQPTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLP 125 Query: 134 VIYRAIKTHYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVL 191 I A+ P++ LR P+ + E+ L + D I N+ +H LF + V Sbjct: 126 PICEALHQQAPRVRLRIEPLPVEEIEDALRASRLDFAIGNLPTLTARTRHQALFEETYVC 185 Query: 192 ICRE--GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 + R+ G P E + +A+HV + E + L + R I + + Sbjct: 186 MTRKRRGLPRAK-ELSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELPHFVA 244 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 + +++A +D+ A +P R +F+R + P + ++H+++ +D + Sbjct: 245 LPSVLAVTDLFATLPRRLAQIFNRGGNFQIYELP-VTLPIAAVTMHWHEHFDQDEGNVWL 303 Query: 310 IDVIRN 315 +++ + Sbjct: 304 RNLMAD 309 >UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=Burkholderiaceae RepID=A9AQZ4_BURM1 Length = 327 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 123/302 (40%), Gaps = 7/302 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + + +DLNL+ A+ + + A ++L ++ +S ++ +LR F DPLF+R +G Sbjct: 17 WPAMDALDLNLIPYLVALDDTRNVSRAGELLGVSQPRVSTALGRLRAYFGDPLFVRTSRG 76 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + PT A+ L L I L +D T +IA + + LP + +A Sbjct: 77 MEPTPRALALLPAARDALAQIERGLVAPHDFDPAASTHTFSIALSDVGEIVFLPKLLQAF 136 Query: 140 KTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTN-RTVQHHVLFTDNMVLICREG 196 P LR+ P + L DL + + LFT V + R G Sbjct: 137 AQCAPHANLRSVSLPHDEVGRGLEAGSIDLAVGYFPDLDGNNFFQQRLFTHRFVCLMRRG 196 Query: 197 NPLLS-LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +PL E + H ++ E ++ L + + + R+ + + +++ +++ Sbjct: 197 HPLEQARPFTVEQFLESGHAVVRAEGRSQEVLEKYLAKQRMQRRAVLETPHFMSLPFILS 256 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +D++A +P ++ P L + D H+++ DP + V+ + Sbjct: 257 RTDLIATVPHAIGYAYAAEHAFIVPVEPPLPLPRFDLKQHWHRKFHNDPRTAWLRGVVAS 316 Query: 316 AF 317 F Sbjct: 317 LF 318 >UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39AY8_BURS3 Length = 331 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 72/323 (22%), Positives = 140/323 (43%), Gaps = 11/323 (3%) Query: 4 NNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQS 63 N I +R ++ + LRNIDLNLL +F+ +Y + AA L+LT ++S + Sbjct: 2 NTVIHGIYARLPTDAM-EHDPDLRNIDLNLLLVFDVLYRTRSTTRAADALHLTQPSVSNA 60 Query: 64 IQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTIT 120 +++LR +F D LF++ G+ PT A + + +GL S+ AL ++D RT Sbjct: 61 LKRLRTLFDDALFVKTADGMQPTPRADAIAARVDEGLASLRTALQAGRAFDPATSTRTFR 120 Query: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRT 178 + T+ A+ +P + ++ P + + P+ A+ + Q DL + + Sbjct: 121 LYTSDLGQAIFMPPLVAHLRRVAPGIRIVTADPPLDAAQQMMKLGQIDLALGMFTGLHAD 180 Query: 179 VQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEM---- 234 LF + V + R +P++ E A HV P + + + + Sbjct: 181 FHQQRLFHETYVALVRNDHPMIGATLTAEQFFAADHVSYTPTAGSHAHFEAALYALSPHA 240 Query: 235 FPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSI 294 R + + + +V++SD++A IPSR +R + + P + D + Sbjct: 241 GSTRHVVLQLAHSFGLERIVSSSDLIACIPSRLARELARLQDVRAVSLP-FDTAPADIAQ 299 Query: 295 HYNKFSLRDPILHGVIDVIRNAF 317 +++ RD + ++ + F Sbjct: 300 FWHERYQRDEGHQWLRTLVYDLF 322 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 304 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 6/296 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LR++DLNLL +F+A+ + AA L ++ AIS ++Q+LR DPLF+R QG+ Sbjct: 4 NLRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQGMV 63 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PT A LH +SQ L ++ LD + QR + + +VLP + +++ Sbjct: 64 PTPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTRLRS 123 Query: 142 HYPQLLLRN-PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P +++ D +L + DL +D N ++ VL + + ++ R+ +P L Sbjct: 124 EAPNVVVEVALAGDDMPQRLYTAEADLAVDAFATENDRLRRQVLLAERLAVVARKDHPDL 183 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + ++ +A HV+L P+ L Q + E R+ ++ A + SDM+ Sbjct: 184 WDDCSKQQFLDAEHVVL-PDRNRRLPLDQILNEPGWQRRTGARVTQFASMLATCSRSDMI 242 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 A +P R ++R + L+ LPFP + + + + DP + + Sbjct: 243 ATVPERLAQQYARAFGLKTLPFP-VEVPPLPVYLLWAPVMDNDPAHIWFRQRLMES 297 >UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPL7_GRABC Length = 308 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 114/303 (37%), Gaps = 6/303 (1%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 + L +DLNLLT F+A+Y + + AA+ + + SA+S ++ +LR D LF+R Sbjct: 1 MSIVHRNLSRLDLNLLTAFDAIYTERSVTKAAECIGVGQSAMSHNLARLREALQDELFVR 60 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVI 135 G+ PT A + + + L ++ L S+ +R I ++ +L++P + Sbjct: 61 TPSGMEPTPRARAIADTVRNLLWTVQDKLLTTRSFTPATAERIWRIGLADNIESLLMPPL 120 Query: 136 YRAIKTHYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 + P + ++ L + + D+ I + D+ + + Sbjct: 121 LDMMLKEAPGMRIQAIFTDGLRVLEALDRDELDMGIGVFRHGGNVHKRRNFAPDSYLCLY 180 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 L + + HVL+ + + R I T+ + L++ + Sbjct: 181 DPKQITLEGPITLDQYASLPHVLVSLRGIFHGVADDALSLLGRTRTIVMTTPHFLSVPYV 240 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + + ++ +P + L P P S+ ++ DP + + + Sbjct: 241 LRGAPVITTLPGTLARSAASAHGLCVSPLP-FELAPFRLSMLWHSSYDNDPAHRWLRNTV 299 Query: 314 RNA 316 + Sbjct: 300 ASL 302 >UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FW21_SORC5 Length = 333 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 13/315 (4%) Query: 11 LSRKSSEGKPQIFT------TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSI 64 + R + E +R+I+LNLL EA+ V + AA+ +++ SA+S S+ Sbjct: 1 MRRWTHEENGMYLMPCMSEIDIRSINLNLLPALEALLVEGSVSGAARRAHVSQSAMSHSL 60 Query: 65 QKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITI 121 +LR +F DPL + G+G+TPT A+ L + E + AL +D + RT + Sbjct: 61 ARLRELFGDPLLVPLGRGLTPTPRALQLRAALPAAFEHLRRALASPEPFDPRTSARTFRV 120 Query: 122 ATTPSVGALVLPVIYRAIKTHYPQLLLRNPPIS-DAENQLSQFQTDLII--DNMFCTNRT 178 AT LP + + H P + L S D L DL + + Sbjct: 121 ATIDYFELTTLPDVLDHLGEHAPFVRLEIERFSPDVTPALVLGDIDLALFGASQPVPAAG 180 Query: 179 VQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDR 238 ++ L+ D ++ R+G+P + D +T HVL+ E + + + + R Sbjct: 181 LRRAPLYQDPFAVMARKGHPAIKRRLDLDTYVALGHVLVSVEGHRGGAVDRALARLGKTR 240 Query: 239 QINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNK 298 ++ + ++ V +SD+L IPS + L P +++ Sbjct: 241 RVALRLPHFMSAPLAVRSSDLLCTIPSSVAQRARELFGLRVFA-PPFELPAAQVVAVWSQ 299 Query: 299 FSLRDPILHGVIDVI 313 DP D+ Sbjct: 300 RHDDDPAQRWFRDLF 314 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 11/306 (3%) Query: 20 PQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRK 79 L IDLNLL +F A+ + + AA + L+ A+S ++++LR + D LFIR Sbjct: 6 NMHQKNLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRS 65 Query: 80 GQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIY 136 G+ PT L I L+ + A+ ++ D + T + L++P + Sbjct: 66 TDGMQPTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLT 125 Query: 137 RAIKTHYPQLLLRNPP-------ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNM 189 + P + LR + DA + L + + DL + F T +L Sbjct: 126 ARVAKQAPNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVIQDFDTPSRFDRELLGASEF 185 Query: 190 VLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 V + R G+P+ E + H++ + +S + + + +M R+I + Sbjct: 186 VCVARAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRIELRVPHYSA 245 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 + A +D++ +P + + L+ P ++K +D + Sbjct: 246 ALSATALTDLVYTVPRILAQHAEQAFGLQVSELP-FEAPVRKIFQVWHKTRTKDFGHQWL 304 Query: 310 IDVIRN 315 +V+ + Sbjct: 305 RNVVSD 310 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 303 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 71/300 (23%), Positives = 136/300 (45%), Gaps = 6/300 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 +L+++DLNLL F+A++ + + AA+ LN++ +S ++ +LR+ F D LF+R Sbjct: 1 MSLMSLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAP 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 +G+ PT + + + + L I ALD ++D +R I VLP + Sbjct: 61 RGIEPTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLA 120 Query: 138 AIKTHYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 + H P L LR+ I + + L + D ++ F + + + V R Sbjct: 121 YMAEHAPMIDLRLRSVDIEEGMDLLDAGELDFMMHMEFPAAKRFGVRPVLHERHVFATRA 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 G+PL+ D T + +HV + S + + + + R++ T+ ++ T+A LV Sbjct: 181 GHPLVREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYRRRVAITTQHMTTVAHLVK 240 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +D++A +PSR P P E+ ++++N+ D + + D I Sbjct: 241 TTDLVASVPSRMAARMVEEGGFAVYPIP-FQIEKAPVAVYWNRRFELDGAMRWMRDAIIE 299 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 303 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 132/293 (45%), Gaps = 4/293 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +DLNLL IF+A+ + I AA+ L +T ++S ++ ++R + DPLFI++G+G+ P Sbjct: 5 MSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGRGIKP 64 Query: 86 TAFAMHLHEYISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 + FA+ L + ++ LE I A+ + +RT IA T L P + R ++ H Sbjct: 65 SPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIAITDGTSGLFWPALRRHLERHA 124 Query: 144 PQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 P++ L P D E L + DL++D + + LF + V + + + L Sbjct: 125 PKINLHAVPYKLDGEALLVNAEVDLVLDYYENRHPQILSQHLFDNQFVCVMAKAHALSEK 184 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 + A H+L+ + +++ ++ R+I T + + L+ S +++ Sbjct: 185 TLTLDDFAAAEHLLVSLSGDASGTVDRKLAQLGHSRRIAMTVNSFASAKTLIEESRLIST 244 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +P + L P + S+ ++ + L + + I + Sbjct: 245 LPYSIIASWQSLDKLTVKTLP-FTVPSVPISMAWHSRNDASISLRWLREAIVD 296 >UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteobacteria RepID=A8V9B9_9BURK Length = 308 Score = 303 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 75/293 (25%), Positives = 127/293 (43%), Gaps = 5/293 (1%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 ID+ LL +F Y + AA+ L L+ IS ++ KLR + DPLF+R +G+ T F Sbjct: 4 IDVKLLNVFAETYRTSSVTQAAENLGLSQPTISFNLSKLRDHYKDPLFVRTSRGMEATPF 63 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L+E + L S ++ S+D QR IA T ++LP + ++ P+ Sbjct: 64 AQELYEQVVDLLASFSNIARLQTSFDPSEAQRIFRIAMTDISQIVLLPTLLNKLRIVAPR 123 Query: 146 LLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 LR I+ + L + +L + M + LF V++ + L Sbjct: 124 AQLRISHITTETPRMLESGEVELAVGFMPQLDAGFYQQKLFPQRFVVLAASRHVALGDSM 183 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 E +A HV + P S + + ++E R + N L IA +VA +D+LA +P Sbjct: 184 SLEYYLSAGHVTVTPSGTGHSIIDRTLREQQLHRHVVLDVPNYLAIADIVAQTDLLATVP 243 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 + +L S + P P Q D H++ + +D + ++ F Sbjct: 244 QKLADLMSSSVDARRYPVP-FEIPQYDVKQHWHARTHQDAGHRWLRALLAELF 295 >UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=B2JSH4_BURP8 Length = 309 Score = 302 bits (775), Expect = 9e-81, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 133/298 (44%), Gaps = 7/298 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + N DLNLL IF+A++ H + AA+ L L+ A S ++++LR D LF++ G G+ P Sbjct: 8 MDNFDLNLLRIFDALWRHGHLGKAAEELTLSQPAASYALKRLREELGDVLFVKTGSGMQP 67 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L + L I + ++ QRT TIA + + LP + + + + Sbjct: 68 TPRAILLAPVVQSVLADIRERVLKAPNFVPDKAQRTFTIALSDVGEMVSLPRLLQRVTSL 127 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNR-TVQHHVLFTDNMVLICREGNPL 199 P + + + + L + + DL I + V L + V + R+ +P Sbjct: 128 APSVNVTTVSFAPKQLLSSLQRSEVDLAIGYFPDLDGVDVFQQHLVRHSFVCLVRQNHPA 187 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + ++ H ++ E + + Q ++E R+ + + L+I +A +D+ Sbjct: 188 VQGRLTKKLFCELPHAVVQVEGRRQEIVEQFLKENGIRRREVLHTPHFLSIPMTIAMTDL 247 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 + + S +F+R LE L P + D + ++++ DP + ++R F Sbjct: 248 VVTVSSDVGEIFARIAELEILD-PPYKMPRFDVNQYWHRSQHDDPGNRWMRGLVRELF 304 >UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXV6_9VIBR Length = 303 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 124/298 (41%), Gaps = 6/298 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + + +I+L+ L + + ++ K + A + LT SA+S +++KLR F D L IR+G Sbjct: 1 MSNISDIELSQLRLLQIIFETKNLTQAGERAGLTQSAVSHTLKKLRHSFNDSLVIRQGNK 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + T A L + + L + + +D RT IAT+ V ++ P + R Sbjct: 61 MVLTPRAESLQTSLGRWLNDFERNILFQEVFDPLTSDRTFYIATSDLVEHILAPHLSRHF 120 Query: 140 KTHYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 P + + I +Q+ + D I + T+ + L+ D+ V + R G+ Sbjct: 121 GRIAPNIRIVFRKIEKRALASQIESGEVDFAISVIDSTHPNLMVRTLYRDDFVSVVRAGH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 PLL+ + + HVL N + ++ + R + + N + +V +S Sbjct: 181 PLLNSKIKAKDFCQYPHVLASTGNDNRGMVDDALEGLGLSRVMQYKVANFSSAPYIVESS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 D + P F +L + + + P + E ++++ + D + I Sbjct: 241 DAILTAPRTFVDLIAGKFNVSSF-TPPVELESYAMKMYWHIKNKDDQANRWFREQIAE 297 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 135/296 (45%), Gaps = 7/296 (2%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 +++DLNLL IF+A+ + AA+ L ++ SA+S+ + +LR F DPLF+R +GV PT Sbjct: 4 KHLDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGVVPT 63 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHY 143 A+ + + + Q + ++ +D + I T V ++LP + R ++ Sbjct: 64 HRALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQETA 123 Query: 144 PQLLLRNPPISDA--ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + L + E L + DL+I ++ N + LF D+ V +CR G+P L+ Sbjct: 124 PHVSLTLHDMESMMPEEMLLAGKVDLVISSVASVNFPIYRQELFRDHYVCLCRAGHPALA 183 Query: 202 LEDDRETIDNAAH-VLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E ++ H + L+ +Q + R + ++L I A + +D++ Sbjct: 184 DPVPIEQFVSSRHLAMPRQNGARERVLQDTLQRLGVTRDVAVQVPHMLAIPATLTATDLV 243 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 A + R F+ PL+ L P L S ++ + R P + D + + Sbjct: 244 ATMACRVAREFAARHPLQVLAHP-LPLPDFPVSQLWHDRTRRSPSHQWLRDTVYDL 298 >UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UEX0_YERRU Length = 299 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 117/299 (39%), Gaps = 6/299 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +LR IDLNLL I + + + + AAK L ++ A+S ++ +LR + D L +R G Sbjct: 1 MNSLRAIDLNLLVILDVLLSERHVSRAAKRLYMSQPAVSHALNRLRYLLDDELLVRVAGG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRAIK 140 T A L E + + LE + + + IA + A+VLP + + ++ Sbjct: 61 FQLTRRAAALIEPLKEVLEKVRYIIGTGNFEPALATQRFRIALSDYGAAMVLPGLLQRLR 120 Query: 141 THYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + L Q+ Q DL + + LF ++ V + + NP Sbjct: 121 QQAPGIDLVVEQASREQMIEQVMAGQLDLALGVFPDLPADMTASRLFEEHFVCVIDQANP 180 Query: 199 LLSLE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 L + + H+L+ ++ + + E+ R++ + L +A + Sbjct: 181 LARKKYFTLDDYLVQPHLLVSMRGESVGEVETALAELGVRRRVAAIMPHFLLAPQALAGT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 D+L + SR + L++L P DF ++ + + + + Sbjct: 241 DLLLTVASRVVTIQQESMNLQRLTLP-FTVPNFDFVQIWHNRNHGKEDHRWLRQQVAES 298 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 127/299 (42%), Gaps = 8/299 (2%) Query: 22 IFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 + L DLNLL F+ + +G+ A + L +T +A+S ++++LR +F DPLF++ G Sbjct: 6 MKHNLNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGS 65 Query: 82 GVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRA 138 + PT A+ L ++ LE + AL+ +D + A+++P + R Sbjct: 66 SMEPTPRAIELSTPVALALEEVRKALNQ-EGFDPMMASENFRLGMIDYASAMLMPGLVRH 124 Query: 139 IKTHYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 + P+ ++ + + L + DL+ V + LF+ V + Sbjct: 125 MSQVAPRAKMQVVDVGGDEEVANLERGAVDLVFSRFQWVPPKVCINRLFSMEYVAVFCPN 184 Query: 197 NP-LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +P + + + HV P + + + + + EM R I + + A++A Sbjct: 185 HPGVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEKRNIIGKLASFGMLPAMLA 244 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +S ++A++P + +R L P + ++ ++ + RDP ++ Sbjct: 245 SSHVMAVMPEGAAKVVARPLGLRVEKLP-FKTPLLRMALAWHPRTDRDPSHVWFRQQVK 302 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 134/300 (44%), Gaps = 11/300 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +R +DLNLL F+A+ + + AA+ L++T A+S + +LR F DPLF+R G Sbjct: 1 MRDIRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI 139 + PTA A+ L + L + L +D Q TI IA+T + + Sbjct: 61 IEPTARALALMPSVKTVLAEVNRMLRPVE-FDPQTAEMTIKIASTDYGLEAIGTPFLSHL 119 Query: 140 KTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 K P++ + P D Q Q + D+ + + + L T++ V + R + Sbjct: 120 KQLAPKIRVAFLPAQDVDLLAQFEQARIDIALVSTQHIPADLHSKPLLTEHYVCVMRADH 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGL-RQRVQEMFPDRQINFTSYNILTIAALVAN 256 P+ + + + ++ + F G+ + + ++ R+++ + + + ++ Sbjct: 180 PMANQLLNLDNFCELDFAMMSYDGGQFYGVCDEALAKLGKTRRVSVSVNHFSLLPNILRT 239 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +D++A+IPSR + + L P L + + +++ + +DP + +++ + Sbjct: 240 TDVVALIPSRLSHHLT---GLICKTLP-LEVQGFSLQMAWHERTHQDPAYQWIRNLLVES 295 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 6/293 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL +F A+ + + A + L LT A+S ++++LR +F DPLF+R G+ PT A Sbjct: 10 DLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTPTGMVPTDAA 69 Query: 90 MHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 + LH ++Q I A+ +D QR ++ + LP + + + Sbjct: 70 LRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFLPPLLSMLDRSARGI 129 Query: 147 LLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 L + + + + DL + + + LF D V + R G+PL + Sbjct: 130 RLEIANVSVDSVSSAMRSGEIDLALGYVPGLDTGCVSKTLFVDEHVCVVRAGHPLRKQKP 189 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 +E + N +V + Q ++E+ R I + + +V ++D+ I P Sbjct: 190 TKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLPHFVVAPEIVQHTDLAMIFP 249 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 F+R LP P I+ +H + DP + ++D I + F Sbjct: 250 RSIAQRFNRNKAFRILPLP-FALPPIEIQVHSHSQFSADPGIAWLLDAIYDMF 301 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 119/297 (40%), Gaps = 7/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L +LNLLT F+A+Y H+ + AA+ L+LT A++ ++ KLRV F +PLF+R G+ Sbjct: 1 MDLSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 PT +A L I+ L+S+ LD + Q I L LP I + + Sbjct: 61 HPTPWADALAPKIAHVLDSVRR-LDEPTPFQPQSAKNQFKIYVNDIGMMLALPKIVQLLN 119 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P L + + N L + DL I + L + V R+ +P Sbjct: 120 QDAPHTQLTVIDLRQDEVVNALDVGEIDLAIGYFVGVPNWARQQHLRDTSYVCAMRKDHP 179 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + NA H + + L + + + R I + I L A SD Sbjct: 180 SIGDTMTLTQYLNARHAMYWTHGSTYGRLDEALAKRGFSRDIAVRIPRLGAIPFLAAFSD 239 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + IP LF P++ +P P ++ ++++ D + +I Sbjct: 240 FVVTIPEDLGLLFRDLIPIKLVPVP-ISLPSFQVKQYWHERLHADSAHKWLRTLILQ 295 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 78/301 (25%), Positives = 148/301 (49%), Gaps = 6/301 (1%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 LRN+DLNLL +F+AVY I +AA+ L L+ A+S ++ +LR F DPLF+R G Sbjct: 1 MATINLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRAG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 +GV PT + + E + + L I D + S D +RT I + A+++P + R Sbjct: 61 RGVKPTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRIVIVDPLEAMLMPTMLR 120 Query: 138 AIKTHYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 I H PQ+ + + P ++ + + DL + + + + V++ R Sbjct: 121 EISAHAPQVTIESRPPWNTNVADAIIAGTLDLACYTFPVSAPGLVFKTICPCDHVIVARR 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 G+P + D ET + A V L+PE + + + + + +R+I + + ++ +V Sbjct: 181 GHPKIGATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWSMPGVVG 240 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++D++ ++P RF L + + L+ P + D+ + +++ + DP + D + Sbjct: 241 STDLVTVMPRRFAELMAPKFGLQIFESP-IPISPQDYHMIWHEKNTDDPGHKWLRDTMVK 299 Query: 316 A 316 A Sbjct: 300 A 300 >UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q46YJ7_RALEJ Length = 394 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 64/315 (20%), Positives = 116/315 (36%), Gaps = 8/315 (2%) Query: 8 EPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKL 67 SR + P ++D LL + + + + A L + AIS ++++L Sbjct: 65 PTPASRPHAGRAPIAMHGRDHLDTYLLRVLHTLLTEQSVTRTAVRLGQSQPAISNTLKRL 124 Query: 68 RVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATT 124 R I D + +R G+ PT L E Q L ++ +D RT + Sbjct: 125 REITGDAILVRGKSGMVPTERGRELLELAEQSLAAMDRIARPPQQFDPATTTRTFHLGAP 184 Query: 125 PSVGALVLPVIYRAIKTHYPQLLLRNPP---ISDAENQLSQFQTDLIIDNMFCTNRTVQH 181 + A LP I ++ P L P SD L Q Q D++I N + Sbjct: 185 DYLDAFFLPNIVERVRRLAPGAKLFVHPMTSSSDFLEDLEQGQLDIVIGNWLSPPEHLHI 244 Query: 182 HVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQ-NFSGLRQRVQEMFPDRQI 240 LF D +V + +PL + H+ P S + Q + E R I Sbjct: 245 SPLFDDEVVCMLGAQHPLARKGLTLKHYLEMPHLAPAPYASMQRSMIDQALAEQGYKRNI 304 Query: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 T + ++ +DM+ +F +++ P+ +P P + ++ F +++ Sbjct: 305 QVTLPYFGLVPYVLMKTDMVFTTGRQFAAHYAQYLPIRMVPSP-VTFPRMRFYQLWHERC 363 Query: 301 LRDPILHGVIDVIRN 315 P + + +I Sbjct: 364 HAAPDVMWMRRMIAE 378 >UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria RepID=Q3JR86_BURP1 Length = 508 Score = 300 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 60/322 (18%), Positives = 119/322 (36%), Gaps = 10/322 (3%) Query: 4 NNQIEPCLSRKSSEGKPQIFTTLRN-IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQ 62 N I P + + + R ID LL + + + + + AA LN + AIS Sbjct: 181 KNHIPPPAIDQPGHINGESMSQQREAIDTYLLRVLHTLLMERSVTRAAVKLNQSQPAISA 240 Query: 63 SIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTI 119 ++++LR I DPL +R G+ PT + + L E + L I + ++D R Sbjct: 241 ALRRLRDITGDPLLVRGKSGMVPTEYGLRLLEPVQNALREIERIKFQQHNFDPATSIRCY 300 Query: 120 TIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAEN---QLSQFQTDLIIDNMFCTN 176 I + L +P + + P L + A + L + D+++ N Sbjct: 301 RIGCPDYLNVLFVPTVVERFRQAAPNATLEFHSLGPAFDYELALEDGKLDIVVGNWPEPP 360 Query: 177 RTVQHHVLFTDNMVLICREGNPLLS-LEDDRETIDNAAHVLLLPEE-QNFSGLRQRVQEM 234 + LF D +V + +P + NA H+ P + + Sbjct: 361 EQLHLSNLFVDEIVCLMSNSHPFAKRGGLTLDQYLNAPHLAPTPYSVGQRGAIDVHLARE 420 Query: 235 FPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSI 294 R + T ++ SD++ F + +++ PL +P P L+ + + Sbjct: 421 RLKRHVVVTLPYFNLAPYVLVKSDLIFTTTRLFADHYAKFLPLSVVPAP-LDFPPMQYYQ 479 Query: 295 HYNKFSLRDPILHGVIDVIRNA 316 +++ + + ++ A Sbjct: 480 LWHERCHYSDEVRWLRGLVAEA 501 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 71/301 (23%), Positives = 138/301 (45%), Gaps = 7/301 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L +IDLNLL FE ++ + + AA+ L L A+S ++ +LR++F D LFIR G Sbjct: 1 MGLIDLSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYR 137 + + PTA A+ + IS L+ I L+ ++D T I ++ +VLP + Sbjct: 61 REMQPTAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLE 120 Query: 138 AIKTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 + P + R + L Q + + + R + LF ++ V +CR Sbjct: 121 VCRQVAPSIDFRLIGFEKDSVGDLLEQREIHVALGLFQNPPRQTRQMPLFEEHFVGLCRR 180 Query: 196 GNPLL-SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 G+P++ ET L + + + + + R++ T+ ++L + ++ Sbjct: 181 GHPVVTQESMTPETFARLPQALFTLRRDDIGEIDKVLAQYNLQRRVVLTTPHLLILPTVI 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 ++SD++ +IPSR F+ LE P E + S+ ++K + +D + +++ Sbjct: 241 SSSDLVTVIPSRLLTPFAYKDTLEIFELPVKTEPWM-ISMLWSKLTDQDQASIWLRQMLK 299 Query: 315 N 315 + Sbjct: 300 S 300 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 299 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 72/295 (24%), Positives = 124/295 (42%), Gaps = 8/295 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + DLNL +F+A+Y + AAKVLNLT A+S ++ +LR DPLF+R+G + Sbjct: 1 MHVSRFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 PTA A + + L L EG +D +RT + + A +LP + Sbjct: 61 VPTARARAMVSPVRHALGGFQRCLSEEGGFDASEAERTFVLGLRDGLEARLLPALMSQFM 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + L++ +S +L+ + DL D M ++H V+ +V++ RE +P Sbjct: 121 DEAPGIKLQSLTVSRRQMATELASGRLDLACDVMLALPEAIEHQVVLEGPLVVLMRESHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L D A HVL+ + + R I + + V +D Sbjct: 181 LAQG-MDLPDYLAAQHVLVSSRREGPGLEDFGLARQGYRRHIRLRCQHYQAALSTVQQTD 239 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +L +P+ S L PFP ++ +++++ DP + + Sbjct: 240 LLLTMPASLAGQLSDQ-GLVWKPFPG-GLPGLEMHLYWHRDQSADPAHSWLRQRV 292 >UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=Sorangium cellulosum RepID=A9FB16_SORC5 Length = 349 Score = 299 bits (767), Expect = 8e-80, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 122/297 (41%), Gaps = 5/297 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L ++D +L+ A+ + + AA+ + +T ++S ++ +LR F DPL ++ G+ + Sbjct: 41 MRLPSVDTHLVVALHALLQERSVTRAARRVGVTQPSMSHALSRLRAHFGDPLLVQVGRQM 100 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 T + A L ++ +E + +D +R T + T ++ LVLP + R + Sbjct: 101 TLSERARDLLPRAAEAVERLEQVFGQAERFDPRRSTRTFRLVATDNLELLVLPPLTRILA 160 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + LR I D L + + D + + L + +V + R G+P Sbjct: 161 AEAPHVNLRCRNIPPDFAELLRRGELDAKLGRGGPVPDGCRSTQLAAEQLVCLMRRGHPA 220 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 H+++ P ++ + + Q + R++ T + L +++ SD+ Sbjct: 221 SRKALTAARYAACEHLMISPHGEDHNVIDQELAARGLRRRVTLTVSHFLVAPFILSGSDL 280 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 L + +R +R L P P L ++ + + S D + I A Sbjct: 281 LLTVSARVAVALARKLDLVVRPCP-LEARGYTLTLVWPERSEGDEGHSWLRAAIERA 336 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 299 bits (767), Expect = 8e-80, Method: Composition-based stats. Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 5/293 (1%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 IDLNLL IFEAV + + AA+ LN+T A+S ++++LR I D LF++ GV+PT Sbjct: 3 NQIDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPSGVSPT 62 Query: 87 AFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIKTHYP 144 A+ L I +GL I AL + +T T+A AL LP + + P Sbjct: 63 PKALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPILAHSAP 122 Query: 145 QLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + +R P + +A L Q + DL + + + ++ + D + I R+ +PL Sbjct: 123 NINIRIVPNTNINAAKLLEQSEIDLAMGRFYRSTVRLRVQEIIGDRYICIMRKDHPLAHK 182 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 + A H+L+ + + ++++EM R+I T + L+A SD+++ Sbjct: 183 RLTLKQYIKADHLLVTLTGEATGLVDKQLREMDLSRRIALTVNQFTLVPELIAGSDLISA 242 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 IP R L P + +++ S DP + + Sbjct: 243 IPLRMVERNPFRTDLHITELPLKIAPAF-LQMMWHERSQVDPAHEWLRSQLFE 294 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 8/299 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 L +IDLNLL +F+ + + AA LN++ A+S+S+ +LR +F DPLFIR G++ Sbjct: 20 RLSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLS 79 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKT 141 TA L ++ L+ + + + Q R ++TT VLP I + Sbjct: 80 ATAKTQDLAPLLADTLKGLESLI-QPSEFTPQSSKRRFILSTTDFGTLTVLPKILDKFRQ 138 Query: 142 HYPQLLLRNPPI-SDAENQLSQFQTDLIIDNM-FCTNRTVQHHVLFTDNMVLICREGNPL 199 P +L D +L Q D+ + + ++ L +D MV + R+ +P Sbjct: 139 KAPDAILDVKSWNEDMVAELDQTNIDVAVAVLSKEPPAGIRAMRLKSDRMVCLARKNHPR 198 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + + E+ +HV ++ + + + + +++M R ++ N + A +V +SD+ Sbjct: 199 IEGKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPAARVVMDSDL 258 Query: 260 LAIIPSRFYNLFSRC-WPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 L +P F + + P + D+S+ +++ D ++R AF Sbjct: 259 LLTVPKLFAEDMAATVSEIVVHELP-FASREFDYSMIWHERFQHDAAHVWFRGLLRQAF 316 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 10/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L N+DLNLL +FEA+Y + + A + LN ++S ++ +LR +F DPLF+R G G+ Sbjct: 1 MNLSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK----QRTITIATTPSVGALVLPVIYRAI 139 PTA A L I LE I AL +D QR +A +LP I + Sbjct: 61 LPTARAHQLMLQIQPVLEQIHQALTPPTRFDPATASQRRFRLAAGDYADITLLPTIISRL 120 Query: 140 KTHYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + P + +R + QL + + D+ + + LF ++ I + Sbjct: 121 RQAAPGIDIRVSRLDRRTVVQQLERGEIDVALGGHLEVPEGMLVQPLFNESFTCIASRHH 180 Query: 198 P-LLSLEDDRETIDNAAHVLLLPE--EQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 P + + + + H L P + QR+ EM +R++ T +I+ + A+V Sbjct: 181 PQIAAESWNLQQYIGLPHALYAPSDDGSARGIIDQRLTEMGLERRVAATFSHIIALPAVV 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFP-SLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 A SD++A + + F+ ++ LP P L + RDP L + D + Sbjct: 241 AGSDLIATLATSVARQFADPSRIQFLPLPSELAMPAFPIECVAGRQVKRDPALAWLCDTL 300 Query: 314 RNA 316 Sbjct: 301 SQL 303 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 298 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 72/298 (24%), Positives = 136/298 (45%), Gaps = 6/298 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLLTIF+A+ + +AA + ++ AIS ++ +LRV D LF+ G+GV Sbjct: 1 MNLRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGV 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 PT A+ L E + + LE + AL G +D + R TI++ G +V+P + R ++ Sbjct: 61 KPTQRALQLQEPVRRILEDVRAALTSTGEFDPESSDRVFTISSIDYGGIVVIPRLLRYLQ 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 +++ P +A + + DL I + + + +L + + R+ +P Sbjct: 121 KQQSPIIVNINPSQTGEAHRDVDRSSGDLTITSDPLLSPDHECKLLRRELPYCLARKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 ++ E HVLL L + ++ +R+ + + +V N+D Sbjct: 181 DITGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFFNMPYIVGNTD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 M+ +P + F+R + L+ L P N + + +++ D + D I Sbjct: 241 MICTMPRQMAEDFARQFGLQVLAAPFDNWTA-SYFMVWHRSFNGDSGHCWLRDSIFRL 297 >UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A9CLK9_AGRT5 Length = 325 Score = 298 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 7/303 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L IDLNLL F+A+ + + A + T A+S ++ +LR + D LF+R Sbjct: 5 IHPMNLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGP 64 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYR 137 G+ PT A+ L E IS L I L +D + + +IA + G+++LP + Sbjct: 65 NGLQPTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLS 124 Query: 138 AIKTHYPQLLLRNPP---ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICR 194 ++ P + ++ DA + L DL + + LF + V I R Sbjct: 125 LLEEKAPGIDIKVRDYSSRDDAVSLLDSGGVDLTVGIPPTPTSRILSARLFQERFVCILR 184 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 + +P+L D ET + H+L+ P+ + + R+ T ++ ALV Sbjct: 185 KDHPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHMHVAPALV 244 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 A+SDM+A + L FP L + F + +++ + P + + + Sbjct: 245 ASSDMVATVIESVVAHSGFAERLAVFDFP-LPLNPVPFVLSWHRRNDGHPAQQWLRNGLL 303 Query: 315 NAF 317 AF Sbjct: 304 AAF 306 >UniRef50_P30979 Uncharacterized HTH-type transcriptional regulator ybeF n=45 Tax=Enterobacteriaceae RepID=YBEF_ECOLI Length = 317 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 317/317 (100%), Positives = 317/317 (100%) Query: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI 60 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI Sbjct: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI 60 Query: 61 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT 120 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT Sbjct: 61 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT 120 Query: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ 180 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ Sbjct: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ 180 Query: 181 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI 240 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI Sbjct: 181 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI 240 Query: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS Sbjct: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 Query: 301 LRDPILHGVIDVIRNAF 317 LRDPILHGVIDVIRNAF Sbjct: 301 LRDPILHGVIDVIRNAF 317 >UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=Betaproteobacteria RepID=C4KB22_THASP Length = 333 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 126/306 (41%), Gaps = 6/306 (1%) Query: 18 GKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFI 77 + +LR+ DLNLL + AVY + AA+ L L+ +S ++ +LR +PLFI Sbjct: 16 NNTRARMSLRDFDLNLLRVLLAVYEAGSVSRAAEHLGLSQPTVSSALGRLRRALGEPLFI 75 Query: 78 RKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPV 134 + GVTPTA L L + + +D + +T+A + + LP Sbjct: 76 KTASGVTPTARTHALASSARAMLARLETDFFVADRFDPAKYEGNLTVALSDVGELVFLPR 135 Query: 135 IYRAIKTHYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNR-TVQHHVLFTDNMVL 191 I +++ P +L + + + + + DL I + L V Sbjct: 136 ILDSVRRLAPLAMLDSVTLAPGELMRAMEDGEVDLAIGYYPDLDAAGFYREKLLDHRFVC 195 Query: 192 ICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 + R +P+ + E + H + + ++ + ++ + R+I + + +++ Sbjct: 196 LLRADHPVQDRQLSLERFLSLEHAAVRAKGRSQEIFEKYLERLRIQRRIVLRTPHFMSLP 255 Query: 252 ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVID 311 ++ SD++ +P + F+R ++ P L I+ H+++ DP + Sbjct: 256 GIIGRSDLVVTLPHAIGHYFTRVGEKVRMAEPPLAIPHIELYQHWHRGFHHDPRNRWLRT 315 Query: 312 VIRNAF 317 ++ F Sbjct: 316 LVAGLF 321 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 9/300 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + N DLNLL +F+ + + + AA+ L LT +S ++ +LR DPL +R G+ + Sbjct: 26 MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 85 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIK 140 PT A+ L I L+ I L ++ QR+ + IA T V L +P + ++ Sbjct: 86 RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 145 Query: 141 THYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + ++ L + DL++ H + + + R+ +P Sbjct: 146 LLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGRFDEVPARFTRHPWRRETLQIALRQQHP 205 Query: 199 LL--SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 L D + H+ + Q + Q + E RQI +T+ N L A L A Sbjct: 206 HLVPGQALDLDAFLGLRHIWV-HGGQTRGMVDQWLAEQGLTRQIAYTTPNYLQAAHLAAA 264 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +DM ++P + F+ PL P E + + + DP L +++ I Sbjct: 265 TDMCVVLPRQLAQQFAHLLPLAVYELP-FALEPFELEVVHLSHRQHDPALAWLVEQILTL 323 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 77/298 (25%), Positives = 139/298 (46%), Gaps = 7/298 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L DLNLL +F+ +Y + AAK L+LT AIS S+ +LR F DPLF R+G + Sbjct: 1 MALNRPDLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A E + GL I A++ ++D ++T + + + LP + + Sbjct: 61 VPTPLARRFLESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKLA 120 Query: 141 THYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 YP + +++ D E QL+ + D ID + + H +L D +V++ R+G+P Sbjct: 121 P-YPDMEVQSQRVARRDMETQLAAGKLDFAIDVLLPVSNQTSHELLRQDRLVVLARKGHP 179 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 +++ D + A H+L+ + + R I + +V +SD Sbjct: 180 VIAQGLDMASYLEARHILVSSRAEGPGIEDFELSRHGAQRTIRLRCQHYYAACRVVESSD 239 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +L +P + + ++ +E L P + ID ++++K ++P L D++RN Sbjct: 240 LLLTMPETYARIIAQNTDIEVLA-PPVEMPSIDVHLYWHKAYEQEPALVWFRDLLRNL 296 >UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Burkholderiales RepID=Q2KYC5_BORA1 Length = 306 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 131/303 (43%), Gaps = 5/303 (1%) Query: 18 GKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFI 77 K + LR +DLNLL +F+ + + I A+ L+L+ A+S ++++LR+ F D LF+ Sbjct: 2 NKGGVVDALRKLDLNLLVVFQHLLEERNISAVARRLDLSQPAVSNALRRLRLAFGDELFV 61 Query: 78 RKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPV 134 R QG+ PT A + +S+ L + D +D QR + IA + + +P Sbjct: 62 RTAQGMLPTPLAEGMGGQVSEALSLLSHLADAAQPFDPATSQRRLRIAMSDAGEIHFMPT 121 Query: 135 IYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICR 194 + H P + + + +D + +L + DL + + +LF + R Sbjct: 122 LMELCARHVPGVRIDSLRCTDLQRELDTGRVDLALGAFDGLGSGIVQRMLFRQGYATLFR 181 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 G+P H+++ + Q ++ Q F+ + + +V Sbjct: 182 AGHPRAYAGMSARAFRAEQHLVVS-RAAPDGQINQALERAGVVLQEQFSVPHFAAVPYIV 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + +D+LA +P + + + L+ L P + + ++++++ RD + +I Sbjct: 241 STTDLLATVPEKLAASAAPRFGLQVLTLP-IKVPLLQTNLYWHRRFQRDGANQWLRGLII 299 Query: 315 NAF 317 + F Sbjct: 300 DTF 302 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 296 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 124/300 (41%), Gaps = 8/300 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L IDLNLL +F+A+Y H+ + AA + ++ SA S I +LR F D LF+R + Sbjct: 1 MDLHQIDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 PT A + +++ Q L I A++ +D I+ T +LP + + Sbjct: 61 QPTPRAEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVS 120 Query: 141 THYPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRT--VQHHVLFTDNMVLICREG 196 P + L L + D + + ++HH +D+ + R+ Sbjct: 121 HQAPNIKLTVIGAKAPQPLTHLENNEVDFALGFSHEIEASSLIEHHTWLSDSYCTVARKN 180 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +P L+ D +T HV + P + + Q + + R ++ ++L + + Sbjct: 181 HPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQVLAQHKLKRHVSLQLPSVLVAPHSIIH 240 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 SD++ +P ++ +E P ++ +I+++K + + + ++ Sbjct: 241 SDLILTMPRIVAEQVAKQVEIEIF-TPPISIPDYHLNIYWHKINADKASFKWMKQLFQSL 299 >UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q393U0_BURS3 Length = 310 Score = 296 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 125/298 (41%), Gaps = 7/298 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLL +A+ K + AA + L+ SA+S ++ +LR++ D L IR G+ Sbjct: 1 MNLRSVDLNLLVALDALLTEKHVTRAATKVGLSQSAMSSALGRLRILMRDELLIRNATGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A+ L E + Q L L+ +G++D + + + L++P + ++ Sbjct: 61 EPTPRALELEEPLRQLLHQAERLLESDGAFDPATTAGHFRLRMSDVLEYLLMPPLLAQLE 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + L +S L D+ + VQ LF D MV + +P Sbjct: 121 QEAPGVTLDVVHLSPGQTVTALEADDIDVAVSMDLEHAGAVQAMPLFDDRMVCVMARDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + + H+ + + + ++ M R + + L + L+ +S Sbjct: 181 CAAEALTLDLFLSLPHLKVSISSTDGRYVDAKLAGMRRARNVVLNVPHWLVVPHLLRHSS 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 M+A++ +R F+ L P +S+++++ P + + IR A Sbjct: 241 MVAVMSARLAERFAAD-GLVLKALP-FESAGFHWSMYWHRRHDSVPAQAWLREKIREA 296 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 296 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 119/297 (40%), Gaps = 6/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL +F+A+ + + AA+ + LT A S ++++LR F D + + G+ + Sbjct: 1 MRFKGLDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT FA LH I Q L + A+ + +D R I + + VL + Sbjct: 61 HPTPFAEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFA 120 Query: 141 THYPQLLLRNP-PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + + P + +L + DL++ VLF + V++ NP+ Sbjct: 121 RTAPGVRIEIIQPNEHSVAELEAGRADLLVTPEPFLASWHPSEVLFDEEQVVVGWAQNPI 180 Query: 200 LSLEDDRETIDNAAHVLLLPE-EQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + A HV + + + + M +R++ T + + + + Sbjct: 181 FARGVTADDFYAAGHVTVAFGANRTPAFADSALSRMGRERRVEVTVGSFASAPWFIEGTS 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 LA++ R +R + L P + + + +++ D L + +R Sbjct: 241 RLAVLHERLVRQIARRFNLAWARMP-FDFPTMQEMMQFHEARAEDAGLAWLRQQMRE 296 >UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08NF6_STIAU Length = 322 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 6/296 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L +ID NLL + +A+ + A+K + L+PSA S ++ +LR + D L +R G Sbjct: 10 MHPVQLSSIDTNLLVVLDALLQEGHVGRASKRVALSPSATSHALARLRELLGDELLVRAG 69 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 + + T A+ L + Q +E + L S+ + T + TT + ++L + R Sbjct: 70 RQLVLTPRAIALAPQVRQLMEQMERILRPAESFHPAKLEHTFRVLTTDHIEFVLLRPLDR 129 Query: 138 AIKTHYPQLLLRNPP-ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 + P+++L N P + DA +L + DL + LF D V + REG Sbjct: 130 FLTDEAPRVILHNRPMVPDAVEELRGGRADLAFGVFTDLPDDISSQELFKDRFVTLVREG 189 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +P+L+ + HVL+ P S + + E R++ T + L+ VA Sbjct: 190 HPVLARPLTLKRFAELDHVLVAPRGTATSRMDLLLAERNLKRRVVRTLGSFLSAPFFVAQ 249 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 SD + +R + + L L P + E + +++ DP + + Sbjct: 250 SDHAVTLSARIADALAPLLGLRVLE-PPIAYE-YTLTQIWHRRWDADPAHAWLRQL 303 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 77/299 (25%), Positives = 137/299 (45%), Gaps = 7/299 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR +DLNLL FEA+Y I +AAK LN++ IS ++ +LR DPLFIR G+GV Sbjct: 1 MDLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGV 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A + + L+ I + +D +R I + +++P + RA+ Sbjct: 61 APTPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAV- 119 Query: 141 THYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 Y + L P+ D L+ DL + + ++ + +V++ R+G+P Sbjct: 120 QDYRSVTLEMLPVMDFPIAEGLNDGSLDLALTTFDPQHGDIECEQVGAAKIVIVARKGHP 179 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E + HV L+P+ + S + + ++ DR I + + ++ANSD Sbjct: 180 RIKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFWSFPHILANSD 239 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 ++A++P F + +PL+ P P + + + K DP + + I A+ Sbjct: 240 LIAMMPGDFAAHAALFYPLDIFPVP-FEFPEQHIYMIWKKRHGLDPGHTWLREKIVEAY 297 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 127/300 (42%), Gaps = 6/300 (2%) Query: 22 IFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 + R +DLNLL F +Y + + AA L+L A+S ++ +LR +F DPLFIR GQ Sbjct: 1 MENDFRGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQ 60 Query: 82 GVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRA 138 + PTA A +L +S E + L S+D R IT+ T V ++P++ + Sbjct: 61 VMRPTARADYLATQLSPAFEQLQSVLGEPESFDPLTDSRAITLGMTDWVEIWLMPLLLKR 120 Query: 139 IKTHYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 +K + P L + +L DL+I ++ L + + Sbjct: 121 LKANAPHLRINLVATDPFLDVERLENDSVDLVISVASPQAGWLKQRALLSSGFRALWHPQ 180 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 L E H+L+ E+ + +++ R I +T+ + + ++ + Sbjct: 181 QLALPSPVPLEVYSQQRHLLVTYRERAHGIVDDMLEKQGMTRTIYYTTPHFSALPGILQH 240 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + +A +P + L+ + + L P P L+ S ++ +P + + + I A Sbjct: 241 TPSVATVPEKLATLWCQHYGLNDSPVP-LDLPTYTLSALWHARQDSNPAIAWLYEQIAEA 299 >UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XJ4_PSEA6 Length = 299 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 125/296 (42%), Gaps = 6/296 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL +A+ + + A + ++L+ S +S ++ +LR F D LF++ G+ + Sbjct: 1 MRFKGLDLNLLVALDALIAERNVTRAGERIHLSQSGMSSAVSRLRQYFDDELFVQVGREL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT+ L + + + L + + +D +R IA + +++P + + Sbjct: 61 IPTSLTETLAKPVRRILVEMENTIISRPKFDPASDERCYRIAASELTTMVLMPTVISRLA 120 Query: 141 THYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L I + + L + DL+I T ++ + IC + N + Sbjct: 121 QDAPNIRLNLSTIGET-DLLDKGDIDLMIIPKQFTQDGHPFDEIYQEGYKCICWQENTSI 179 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRV-QEMFPDRQINFTSYNILTIAALVANSDM 259 + E +A HV++ + N R++ + N+L +L+ + Sbjct: 180 GEKITFEDYQSAGHVVVSYGKNNAPAFDSWFMSHYGISRRVEIMTSNLLAPPSLIIGTQR 239 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A + SR + S+ P+ L P + + S+ Y++ D L + +I + Sbjct: 240 IATVHSRLAQIVSQSLPIRVLQ-PPIEIPPLTQSMQYHRNRENDVGLSWLRQLIID 294 >UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XG7_DESDG Length = 309 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 124/300 (41%), Gaps = 12/300 (4%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +++LNLL +A+ + AA+ L++T S +S+++ +LR +F DPL +R G + Sbjct: 1 MDISSVNLNLLVALKALLDEGNVTRAAERLHITQSGMSKNLAQLRELFDDPLLVRSGNAL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L + L ++ AL +D +R+ T+A T V +LP AI Sbjct: 61 VLTERARELEGPLEMVLGNV-HALFEAQRFDPATCRRSFTLAVTDYVAQYILPDALGAIL 119 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + ++ D+ L++ + D+ +V+ + D + R G+PL Sbjct: 120 AAAPGIDIQAIGWEPDSMRALAEGKIDMATCLTEGVPASVEQLRVGEDRFACLMRAGHPL 179 Query: 200 -LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + A H + + + + ++ R I + +V+ +D Sbjct: 180 AAAGAMRLDRYVQADHAAITIGGDKVRIIDRVLGKLGHSRNIRLRVPFYASAVEIVSRTD 239 Query: 259 MLAIIPSRFYNLFSRCWP-----LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +L +P+ + L P P + ++SI ++ DP V +++ Sbjct: 240 LLLTLPAHVARNVIQARNPSEPALAWAPLP-FAVDSFEYSIIWHARFHGDPGHRWVREML 298 >UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD9_BURXL Length = 305 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 120/297 (40%), Gaps = 7/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + DLNL+ F A+Y + AA+ LNLT +S ++ +LR + DPLF R +G+ Sbjct: 6 MQTASTDLNLIRAFVAIYETGSVSAAARRLNLTQPTVSYALSRLRTLLHDPLFSRTREGM 65 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 PT A L+E Q L+ I GA+ +D R IA + LP + ++ Sbjct: 66 APTFNASQLYETFRQALDRIEGAIAATRYFDAATSTRCFRIALSDLGELYFLPRMVERLQ 125 Query: 141 THYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + L + L+ Q D + N+ + LF++ + +P Sbjct: 126 RTAPGVELEVVQLDVERTAEWLNTGQIDAAVGNLHLVGGKARRRYLFSETYSCLVSHRHP 185 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + A HV + + + M R+I + + +VA SD Sbjct: 186 WIGTTLSLGDYVRAKHV-VGASSSGHRLVEDVMTGMGLSRKIALRVPHFTNVVDVVAGSD 244 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++ +P+R N++ + LP P + + D ++++ + + ++I Sbjct: 245 LVLTLPARVANVYQSTGTVRALPLP-VPVDPFDVNLYWQDRATDLSAQKWLCEIIAE 300 >UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomonas sp. A4 RepID=Q1MWN1_9SPHN Length = 302 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 138/300 (46%), Gaps = 6/300 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +R++DLNLL +FE V+ + +V AA++L ++ A+S +++KLR + D LF+R G Sbjct: 1 MVKIRDVDLNLLRVFECVFQTRKVVEAAEILGISQPAVSNALKKLRELLNDELFVRTRSG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI 139 + PT +AM L E IS L+++ A++ S+D + R IAT+ P + I Sbjct: 61 MIPTQYAMQLAEPISYALKTLEIAIEASESFDPRRDKRHFVIATSDLGDMYFGPKLISHI 120 Query: 140 KTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + + + L + D+++ + LF ++ R+ + Sbjct: 121 RDISQDITIEFVGNSRPHIFESLENGEVDILLGFRPDLITNMFVFRLFYQGWRILARKDH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P+ S + RE + + + E + + + ++ DR I + N T+A L+A Sbjct: 181 PIFSSKAPREDLLACRWIGVRSEGSGSASVNAELLKVGMDRNIVVWTSNFGTLAPLLAVG 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 D+ A +P + + + L+ +PFP ++ + S ++ + DP + + F Sbjct: 241 DLAACVPEIYTTVIDEAFGLKSMPFP-VDLPKHSISSVWHSKAHNDPANQWLRQQVSILF 299 >UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteria RepID=Q88I06_PSEPK Length = 312 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 124/297 (41%), Gaps = 6/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 ++DLNLL + + + I AA+ L++T SA S + +LR F D L ++ G+ + Sbjct: 1 MRFHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT +A+ L + + + L +I ++ + +D +R + + + ++V + + I Sbjct: 61 QPTPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIH 120 Query: 141 THYPQLLLRNP-PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 PQ+ P + L + + D++I +LF ++ V + NP Sbjct: 121 QEAPQITFEMIGPGDSSAELLMRGEVDMMIVPERYLIEGHPAQLLFEEDHVCVVWRDNPE 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRV-QEMFPDRQINFTSYNILTIAALVANSD 258 + E H+ + + + +R++ + + T+ L+ + Sbjct: 181 VGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQLLVGTV 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A + R L++ PL LP + + + +++ DP+ + + I + Sbjct: 241 RVATMHRRLAELYAGYLPLRLLPP-PVKIPVMREFMLWHRSMDGDPMHRWLRERISD 296 >UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=Bacteria RepID=A1VMI6_POLNA Length = 333 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 105/281 (37%), Gaps = 6/281 (2%) Query: 41 YVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGL 100 Y + + AA+ L + +S + +LR DPLF+R +G+ PT L + + L Sbjct: 53 YNTRSVTRAAEQLGQSQPTVSIWLARLRRQLGDPLFVRTPEGMLPTPRTDALIATVREVL 112 Query: 101 ESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPIS-DA 156 E + + E +D QR I T + +LP ++ ++ PQ+ L I Sbjct: 113 EGLRRLSESESRFDPATAQRGFRIFMTDASHITLLPRLFSHVRALAPQVRLEAATIDARM 172 Query: 157 ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVL 216 L + DL + + LF + + +C +P + + AH+ Sbjct: 173 APALQSGEGDLALGLVPGLEAGFYQQTLFGQDWICLCNARHPRIGEMFTLQDYAAEAHIG 232 Query: 217 LLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP 276 + + L ++ R++ L +AA+++ SD++A +P + Sbjct: 233 I-VSGTGYQLLDGALKSQGIARRVLLELPGFLGLAAILSTSDLVATLPRHIGETLANAAG 291 Query: 277 LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 L LP P +++ D + V F Sbjct: 292 LRVLPCP-FEIPGFTVKQYWHARYHHDAGNRWLRGVCAELF 331 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 292 bits (750), Expect = 7e-78, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 9/296 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 R +DLNLL EA+ + + + AA L+L+ A+S + +LR +F DPL I +G+ Sbjct: 1 MDTRRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 TPT A+ L + Q L+ + + +++ T++IA T V A ++ + A++ Sbjct: 61 TPTVKALELLVPLRQALDQVRATVTTHLNFEPATASLTVSIACTDYVQAALIKHLVVAMR 120 Query: 141 THYPQLL--LRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + LR + E Q+++ + DL + NM + L+ ++ VLI R G+P Sbjct: 121 REAPGVRIALRILDVPQLELQMTRGEVDLAVINMNGAPPALHAQHLYDESYVLIGRRGHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSG-LRQRVQEMFPDRQINFTSYNILTIAALVANS 257 L + HV++ FS + + R + ++ + L + LVA S Sbjct: 181 SLHAGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLRRNVVLSASSFLPVPELVAQS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 D +A++P R P L E + +++ S V + I Sbjct: 241 DCVALVPRRLVEGRDEQLLCVA---PPLPVEGFAIGMFWHERSDGHAGFRWVREFI 293 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 292 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 120/300 (40%), Gaps = 5/300 (1%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 Q LR IDLNLL + +A+ + + AA+ L ++ A+S ++ +LR +F DPL +R Sbjct: 2 QQIHDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRVK 61 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRA 138 + T+ A+ L + L+ + G + +R + + +VLP + R Sbjct: 62 SRMQLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRRHFRLGMSDYGAWVVLPALLRQ 121 Query: 139 IKTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 + P + P + Q+++ Q D + V+ LF + V +CR Sbjct: 122 QQALAPGVSFGIVQEPRLETARQVAEGQLDCALGVFPLLPEGVRARRLFEERFVCVCRRS 181 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 + A HV + ++ + +++ RQ+ T + AL+A Sbjct: 182 LFDRPDGLSLDRYLAARHVRVSLQDNPAEEVDSALEKRGLRRQVALTLPHFTVAPALLAG 241 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +D++ I R L P L + D+ + + R+ + + I+ A Sbjct: 242 TDLVLTIAERTLERLRLPEELALCE-PPLAIPRFDYVQIWRGDAEREAAGAWLREQIQAA 300 >UniRef50_A4Z170 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z170_BRASO Length = 313 Score = 292 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 140/303 (46%), Gaps = 8/303 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 K +L ++DLNLL +FEA+ + + AA + L + S+++ +LR +F DPLF+R Sbjct: 2 KNDQMPSLAHVDLNLLVLFEALLSERNVTRAAVRVGLAQPSASKALDRLRHLFGDPLFLR 61 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVI 135 G+ PT A+ L I+ LE + + E +D + ++ +A + + ++LP + Sbjct: 62 APGGMRPTPRALELAPEIALVLERVRALVAAELPFDPATARGSLRLAMSDAAEFVLLPGL 121 Query: 136 YRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 + P + L+ P+ +L + + D ++ + + LF + V + Sbjct: 122 VAQLAGTAPGVTLQARPLDKDRVFAELDEGRLDAVVGVFRELPKRFRSAPLFEERFVCLA 181 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 R +P L+ ET H+L+ + + ++ + R++ T L + + Sbjct: 182 RADHPRLATGLTLETYVELPHLLVTLRDDRKGAVDDALEAIGLHRRVAATLTRFLALPPV 241 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +A SD +A +PSRF + L + P L + + + + R+P++ + +I Sbjct: 242 LAFSDAIATVPSRFAAASAPNCRLHE---PPLALPRWTEQLVWRAGAEREPMIAWGLQLI 298 Query: 314 RNA 316 R+A Sbjct: 299 RSA 301 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 11/305 (3%) Query: 22 IFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 +F + R +DLNLL +FEA+ + AA L +T A+S ++ +LR DPLF+R G Sbjct: 1 MFVSFRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGT 60 Query: 82 GVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRA 138 G+ PT A+ L E I + LES+ GALD + +D R +++ + V +LV+P + Sbjct: 61 GIRPTQRAVVLWEPIGEALESVRGALDEQ-VFDPARAQTEFSLSMSDYVSSLVMPDLLGH 119 Query: 139 IKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDN---MFCTNRTVQHHVLFTDNMVLIC 193 + P+ + P + + +QL + D ++ ++ L+T + Sbjct: 120 LGKVAPKARVHTVPNTILEIADQLEDNRVDCVMSVYVNEAQQPAAIRSRSLWTVDYACFM 179 Query: 194 REGNPLLS-LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 R G+PL T NA HV + + + R + T + Sbjct: 180 RRGHPLAGMKRLSTRTFLNAGHVDVSLAGKTMPSYDLFLASRGLSRNLVATVNHYSAAYE 239 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 +V SD++A++PS + L +P P L S+ +++ + P + + Sbjct: 240 VVRQSDLIAVLPSDLRSQSRHAPLLHAMPLP-LQAPPRIVSLFWHQRNDTVPAQRWLRET 298 Query: 313 IRNAF 317 + F Sbjct: 299 LVEMF 303 >UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ61_9GAMM Length = 302 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 124/301 (41%), Gaps = 8/301 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLL + +A+ + + AA+ LN++ A+S+++Q+LR DP+ +R G G Sbjct: 1 MNLRSVDLNLLVVLQALIDEQHVSKAAERLNMSQPAVSRALQRLRTTLQDPILVRTGSGY 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 +A A+ L E +S L + A+ +D + + + L++P + R ++ Sbjct: 61 DLSARAVVLREQLSHVLHEV-QAIMQPEQFDPMQAEGVLKLTGLDLELILLMPDVIRMLR 119 Query: 141 THYPQLLLRNPP-ISDAENQLSQFQTDLIID--NMFCTNRTVQHHVLFTDNMVLICREGN 197 P L + P + + L + I + + + V + N Sbjct: 120 EKAPNLRVEVVPQLPEHFELLERGDVHFTITGLFPQTHHDQYRRIEIARTGHVCVMDRDN 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 PL E + NA+H L+ + + + E R++ N +++A S Sbjct: 180 PLAKGELSLQDYANASHGLVSITGKGPGMMDDALGEFGYKRKVMLRLANFMSVAQFCQQS 239 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFP-SLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 D++ +P ++ L P P ++ ++++ DP+ V + Sbjct: 240 DLIFTLPKIMATHLAQGTSLVLRPLPKEFALPEVVLYMYWHDRYHHDPMCSWVRAELAEI 299 Query: 317 F 317 F Sbjct: 300 F 300 >UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q1LD16_RALME Length = 315 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 123/310 (39%), Gaps = 12/310 (3%) Query: 15 SSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDP 74 ++ + + +DLNLL +A+ + + + A+ L LT A+S + +LR IF DP Sbjct: 1 MTDIRGISVVDFKGVDLNLLVTLDALLDERNVTHTAERLGLTQPAVSAQLARLRRIFDDP 60 Query: 75 LFIR--KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGA 129 L I G+G+ +A A+ L E + L+ + + +D R IA + + + Sbjct: 61 LLIPADTGRGMIASARALALLEPLHVALKDLESVVHRRPEFDPFVDTRQFVIAASDNATS 120 Query: 130 LVLPVIYRAIKTHY-PQLLLRNPPISDAE--NQLSQFQTDLIIDNMFCTNRTVQHHVLFT 186 + + + + + AE QL + DL+I + T++ L Sbjct: 121 TLGMSLLERLSIVAGTGVRVAFVHGRQAEIAAQLESGEVDLLIGSERMVPPTMRARKLLD 180 Query: 187 DNMVLICREGNPLLSLEDDRETIDNAAHVLLL-PEEQNFSGLRQRVQEMFPDRQINFTSY 245 + V+ R+ +P + + HVL+ F + +++Q + R + + Sbjct: 181 ETFVMAQRKSHPRGARRLTLDMYCKLRHVLVSTSGGSFFGFVDEQLQLLGRSRDVAVSVQ 240 Query: 246 NILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPI 305 + L+ SD + +P+R ++ LP + S ++ + DP Sbjct: 241 AFTVVPDLLRRSDYVCTMPARLAARYADWLDAFALP---FDVPGFSLSAAWHPRNHADPA 297 Query: 306 LHGVIDVIRN 315 + + + Sbjct: 298 IAWLRSTLAE 307 >UniRef50_C5AL93 Transcriptional regulator, LysR family protein n=13 Tax=Burkholderia RepID=C5AL93_BURGB Length = 331 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 130/298 (43%), Gaps = 9/298 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +L +DLNLL +F A+ + + A L L+ A+S S+ +LR +F DPLF+R G Sbjct: 1 MRSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + PT + L +++ L+++ AL +D R ++ + + LP I + Sbjct: 61 MQPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEV 120 Query: 140 KTHYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE-- 195 P + + P+ + E+ L + D I N+ +H VLF + V + R Sbjct: 121 NRLAPNIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTARTRHQVLFEEGYVCMMRRRV 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 G P A+HVL+ E + L ++ R I + + + ++A Sbjct: 181 GGP-ARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPHFVALPRVLA 239 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +D +A +P R +F++ + P + + ++H+++ D + + ++ Sbjct: 240 VTDFVATLPRRLAQIFAKDGAFDIFELP-VAIAPVGVTMHWHEHFHEDEGIAWMRQLL 296 >UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q1R0T8_CHRSD Length = 308 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 123/296 (41%), Gaps = 7/296 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 +R IDLNL+ F +Y + AA LN+T ++S S+ +LR +F DPLF R G+ P Sbjct: 1 MRPIDLNLVRTFVTLYESGSVTLAAHKLNVTQPSVSYSLSRLRELFDDPLFSRTRDGMAP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T AM L+ Q L I L +D QR +A T +L I R ++ Sbjct: 61 TFCAMRLYTSFRQALTQIEQTLSDAQHFDPEQSQRRFRLALTDLGETTLLAPILRHMRDL 120 Query: 143 YPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L P+ + D +I + ++ + + V + +P + Sbjct: 121 APGVELEVVPLEIDKVVSWFDNKSVDAVICSRDIQAPSLGRRPIIEERYVGLLGRRHPRI 180 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E HV + P + ++E R+++ + + L+ ++ +L Sbjct: 181 GQTLSMEAFSREDHVQVSPT-TGHGLVEDVLKERDITRKVSVVVPHFSALPRLLESTSLL 239 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 AI+P + LF++ L+++ P + ++ ++++++ + A Sbjct: 240 AILPEQIAGLFTQQADLKQVELP-FDIPPVEVALYWSRQVDDSAAQEWFRRTLIEA 294 >UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogoltabida RepID=Q687Z9_9SPHN Length = 318 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 117/289 (40%), Gaps = 7/289 (2%) Query: 35 TIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHE 94 IF + V + + AA+ L +T +S ++++LR I D LF R G+ PTAFA+ + E Sbjct: 26 RIFHRMMVDRKVSAAAEALGITQPGVSNALKRLRDITDDELFTRAPGGMEPTAFAIQIAE 85 Query: 95 YISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNP 151 IS L + A + +R + T A +LP I P + Sbjct: 86 PISYALAMVDAAFTQPTDFKPASDRRLFRLGLTDIGEAYLLPKILARTAEIAPHVSFTTI 145 Query: 152 --PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL-EDDRET 208 P S+ ++ DL ID H L + V+ R+ +PL + E Sbjct: 146 RPPKSEIREEMEVGSLDLAIDVFPNMKGNFVHRRLLKEKHVICMRKDHPLANKAEWTMAD 205 Query: 209 IDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFY 268 HV+++ + + + R I + L++ ++ ++++A +P Sbjct: 206 YIAQEHVVVIAQGTGHGDIDALLARKGISRNIRLMLPHFLSLGPVMHATNLVATLPEDAA 265 Query: 269 NLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 L + L LPFP + + + +++ RDP + +++ F Sbjct: 266 LLLEEPYELISLPFPGI-LPIVHVDVFWHRRLHRDPANVWLRNLVYELF 313 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 119/298 (39%), Gaps = 10/298 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L IDLNL +F+A+Y + + AA++LNLT A+S ++ ++R DPLF+ G+ Sbjct: 18 MRLSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAGM 77 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT FA ++ + + L+ + ++ +D +R ++ + AL+LP + ++ Sbjct: 78 MPTPFAENIVGRVREALQLLDSSVHEGDVFDPASSERVFRLSMSDLTEALLLPALGELLQ 137 Query: 141 THYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + +R + L+ D+ ID + + L D + R+G+P Sbjct: 138 RQAPGMHVRSYTMDRREIATALANGTVDIAIDAPLLGDPHLHQAPLVRDRYACMIRDGHP 197 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + H+ + + + + + R I + + + D Sbjct: 198 FKGDTLTMDDYLAMGHIHVSSRRKGSGHVDAELTRLGLRRNIQMRVQHYMVAPLIAMRGD 257 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + P R + L P +++ ++++ + +D + + + Sbjct: 258 LALTAPLRLLQRYPA----RILELP-FEMPGLEYFCYWHRSADQDQANRWLRERLAEL 310 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 127/295 (43%), Gaps = 5/295 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++ +L LL IF+A+ + + AA L +T A+S +I ++R I+ DPLF+RKG+ + P Sbjct: 1 MKTQELQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEP 60 Query: 86 TAFAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 T++A+ L + + + ++ A+ +RT IA T + ++ + ++ Sbjct: 61 TSYALSLWDQVGDPMFALTNAVSATQFDPASARRTFRIAVTDVIVEMIWRQLIDLLEREA 120 Query: 144 PQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + + P + + + L DL I + + +++ L VL R +PL Sbjct: 121 PGVDVHAVPYTPEGSYDDLRSAHVDLAIGVLNQHDYSLRSTWLLDSGFVLAMRADHPLAG 180 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + E A H+L+ + + + R+I T + ++ ++ S+++A Sbjct: 181 RQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVPQVLRESNLIA 240 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +P L P + + + ++ R+P + + + I Sbjct: 241 AVPELISQDCGFVDGLWMGELP-FDVDPTSLYLIWHARHDREPGIIWIRNHIERL 294 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 77/321 (23%), Positives = 141/321 (43%), Gaps = 11/321 (3%) Query: 4 NNQIEPCLSRKSSEGKPQIFT----TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSA 59 N+ EP + I + ++DLNL+ F +Y + + A++L +T + Sbjct: 2 NHGREPRPIGPMNTVDQHIDRIYIIGMADVDLNLIRTFVLLYETRSVTRTAELLFITQPS 61 Query: 60 ISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ--- 116 +S S+++LR F D LFIR G+ PT A ++ + Q LE I + G +D + Sbjct: 62 VSHSLRRLRRQFNDDLFIRSSDGLAPTVLAASMYPQLHQALEVIDETVSGVGHFDAETSD 121 Query: 117 RTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFC 174 RT I T +LP + A++T P ++ P+ A +L Q + D +I Sbjct: 122 RTFRICATDLGEISLLPGVLAALETRAPGCAVQVTPLDFASAAEELRQGRADAVICTPRI 181 Query: 175 TNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEM 234 ++ LF + V +C G+P + +E + H+++ Q + M Sbjct: 182 DAPDLRRDPLFREGYVGLCALGHPRIGVEPGLDDFLAERHIVVDAA-AGHVDADQALARM 240 Query: 235 FPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSI 294 R I + + LVA + LA++PSR LF+R P+ P + ++ S+ Sbjct: 241 GRRRDIAVRVPHFAVLPELVAQTRHLAVVPSRVAELFTRSSPVRTFALP-VEIPNVEVSL 299 Query: 295 HYNKFSLRDPILHGVIDVIRN 315 + +L P + + ++I + Sbjct: 300 FTVRRALPSPGVDWLRELIAD 320 >UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Burkholderiaceae RepID=Q46T42_RALEJ Length = 330 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 7/300 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 D NLLT+F+A+ + + AA L LT SA+S ++ +LR F DPLF++ G+ Sbjct: 1 MHTDAFDYNLLTVFDAMLRERSVTRAAAQLGLTQSAMSHALNRLREFFDDPLFVKTAAGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 TPT A L E + + ++ + + S+D QRT T+ T + LP + + ++ Sbjct: 61 TPTIKAEALSETVLDVMTAMRTRVLPQASFDPATMQRTFTLCMTDMGELVFLPPLMKRLR 120 Query: 141 THYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P LR P+ E L+ DL++ ++ ++ LF V I N Sbjct: 121 VVAPHCKLRTLQVPVPQIEGLLASGDADLLLGSVQTAPESLFRQQLFMHGFVTIVSTKNR 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS- 257 + E ++ HV + + + R I + + L+I L+ Sbjct: 181 QVRDALTIEQFESMPHVTVSLAGRTSPSYDAAFESHGLRRNIYLHTPHFLSIPLLMEQQP 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +++A +P N+FSR + + ++ P + S +++ DP + + +++ F Sbjct: 241 ELIATVPQELANVFSR-YGIVRVVKPPVVLPPYALSQYWHPRFHHDPAIVWLRQLVKQTF 299 >UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJR3_SORC5 Length = 306 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 136/298 (45%), Gaps = 5/298 (1%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR +DLNLLT+ +AV + + AA+ L +T A+S ++ +LR++F D L +R+G+ Sbjct: 6 LPRLRAVDLNLLTVLDAVLTERNVTRAAERLGMTQPAVSSALNRLRLLFNDDLIVRRGKE 65 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYD--KQRTITIATTPSVGALVLPVIYRAIK 140 + PT A+ L I + L+ I +L G++D RT + T AL+LP + ++ Sbjct: 66 MAPTPRALALAGPIRKALDLIQASLAHTGAFDCTASRTFRLGITDIGEALLLPRFLQWLE 125 Query: 141 THYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 ++ L P + +N++ + +L++D++ + + V + R+ +P Sbjct: 126 QLGARVRLDFCREPGTSLQNEMRLGKIELVLDHIAIPGEEFRRTRVLDLEFVTLVRQDHP 185 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + HV++ P E + Q + R + L++ +V+ S+ Sbjct: 186 TVGPSLTLDEYMALEHVIIEPREGQTNLAEQIQAAVGRARCVRVQVPRYLSMPFIVSQSN 245 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 ++ +P LF + +P+ + P L + I + ++ DP + + Sbjct: 246 LVCTLPLPLARLFEQHFPVRVVSCP-LPIQPIPLFMMWHACQDGDPAHEWLRRSLIEL 302 >UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J7P4_PSEPW Length = 314 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 118/298 (39%), Gaps = 7/298 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 T ++ L L + + K + +AA+ L ++ SA+S+ + LR F DPL +R+G+G Sbjct: 3 PTFASLSLAHLRTLDCLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGRGY 62 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 + + L E + Q LE + AL ++D +R +A + V +LP++ A++ Sbjct: 63 VLSEYGQALVEPLRQVLEEL-QALRQPAAFDPARCERRFCLAASDYVAEHMLPLLVAALE 121 Query: 141 THYPQLLLRNPPISDAE-NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + + + L+ + DL + + +L D V + R +PL Sbjct: 122 QEAPGVSIDYRTWQAGQYALLASGEIDLATTLFDESPANLHGRLLGEDRAVCLMRRDHPL 181 Query: 200 LS-LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + ++ HV + S + + ++ R+I+ +V NS Sbjct: 182 TACEVLSQDDYLAFKHVRISGGGDKDSFIDRHLRTQGLQRRISLEVPFFSATVQVVGNSQ 241 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 LA +P R L P + Q + + +++ + + + Sbjct: 242 ALATVPEHIARQLCRLHGLAWRPLGFVEHTQ-RYWVVWHQRLQASAEHRWLRNRVFEL 298 >UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X639_OCHA4 Length = 324 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 129/319 (40%), Gaps = 26/319 (8%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +++ NIDLNL+ +F A+ + + A + LNLT SA+S ++ KLR I D LF+R QG Sbjct: 1 MSSIHNIDLNLIRVFNALMEERNVTKAGERLNLTQSAVSHALGKLRYILSDELFVRGPQG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRAIK 140 + PT A L + + L I AL + +AT+ + P + ++ Sbjct: 61 MHPTPRAEELSQPLRSALADISAALSPVQFDPATADMSFVVATSDFYIGTLFPAVMERLE 120 Query: 141 THYPQLL--LRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + LR + +L + L++ + L + + V I R+ +P Sbjct: 121 KEAPGIRLWLRLFNDLNLVEELDRGTLHLVVGAFGRIPSRFRRETLVSVDNVWIMRKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQ---------------------NFSGLRQRVQEMFPD 237 S ET+ + H+ +L + N L ++E+ Sbjct: 181 ASSGPLTIETLGHYPHIDVLLSGRAAMEAAGMQEQEGLERAFVTSNPPFLEGLLREVGLS 240 Query: 238 RQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYN 297 R+I T IL + LVA ++M+A++P + + L P ++ + Sbjct: 241 RRIGATVSLILAVPPLVAATNMIALLPRSVAETYKDTYGLVLHEAPY-PLPATQINMLSH 299 Query: 298 KFSLRDPILHGVIDVIRNA 316 P + + V+R A Sbjct: 300 NTFGAHPAVAWLRSVLREA 318 >UniRef50_B7CP85 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CP85_BURPS Length = 305 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 111/299 (37%), Gaps = 5/299 (1%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 +R DLNLL + + + AA +L+ A+S+ +Q+LR F D L +R Sbjct: 1 MHMKHIRGADLNLLLAAFVLLEERQVSKAADRYHLSQPAMSRMLQRLRDTFGDELLVRTR 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRA 138 G PT ++ + + L + L + + T +A T ++ P ++ Sbjct: 61 GGFEPTVRGRYILHELGELLPRLDALLRGGLFDPTEAEDTFRVACTDYATTILGPRLFER 120 Query: 139 IKTHYPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + P + + A + + DL++ T+ LF D+ V + + Sbjct: 121 VFREAPNVSMDVVAWHDHAFEAIEHGRLDLVLWP-NEVPDTLYSETLFEDDFVCMMSSDH 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P H ++ + + QR+ +M R +A + Sbjct: 180 PSGDGPLVLRDYLRFPHAVVSVLGGKQTIVEQRLHDMGVRRAAGLRVSYFSGAITAIART 239 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 ++A +P R L+ + + P++ ++ + + ++ + D L + IR A Sbjct: 240 ALIATVPRRLAMLYRDRANIRIVEAPAM-FGKLSYKMVWHPRADGDLALQWLRQTIRAA 297 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 287 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 128/295 (43%), Gaps = 6/295 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ++DLNLL +FE+++ + + + L L+ A+S+ + +LR + D LF+R +GV PTA Sbjct: 13 HLDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDELFVRHRRGVEPTA 72 Query: 88 FAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 FA L E +S L + ++ + + R +A + LP + + H PQ Sbjct: 73 FAQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRVALSDIGERYFLPRLAAWLADHAPQ 132 Query: 146 LLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + + + L+ + DL + + + V LF + V I R +P + Sbjct: 133 VSIDTVSASREELLTGLASGEIDLAVGFLPGLGKQVHEKRLFQEKFVYIARRDHPGIDGR 192 Query: 204 DDRETIDNAAHVLLLPEEQNF-SGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 + HV+ P + + + + + + L+I +VA+SD++A+ Sbjct: 193 LQASQLRALPHVVGSPHGTQHAAAVEKVLTGPRVRAVVAMRVGSFLSIGPIVADSDLVAV 252 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +PS L S L+ + P + + S+ +++ DP + V F Sbjct: 253 VPSNLAALVSEHVGLQLIA-PPVRFPSFEVSMVWHRRFHGDPGGAWLRGVFSQLF 306 >UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WDE8_PSYWF Length = 302 Score = 287 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 6/297 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +ID+ LL +F+A+Y I AA+ L++ A S + KLR F DPLF+R G + P Sbjct: 1 MFDIDVRLLLLFQAIYQQNTISKAAQKLDIGQPAASLGLNKLRQHFDDPLFVRVGNQMQP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A +L ++ L+ I D ++ + R I+ T +++P + + +K H Sbjct: 61 TQTAQNLFPLVNNALQHIRAVNDYTHHFEPKNSSRRFHISMTDISHMIIVPKLIKYLKQH 120 Query: 143 YPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL- 200 P L I SD +++S + DL I + F + ++ R+ +P L Sbjct: 121 APHTKLDISAINSDTPSRMSSGEIDLAIGYIPHLEAGFFQQTFFEQHYSVVVRQDHPRLT 180 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E H ++ L ++ R I T L + ++ +D++ Sbjct: 181 QNTLTLEAYQQEQHADVISSGTGHYLLEDHLRRRHIKRHIAITLPTYLGVGLIIQQTDLV 240 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 A +P + L + L LP P L+ + H+++ +P + V F Sbjct: 241 ATLPDKLAKLLLQENRLHTLPLP-LDIPKYQVKQHWHERMHANPDNQWLRQVCYALF 296 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 287 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 7/294 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNL T+FEA+Y+ + AA+ LNLT AIS ++ +LR DPLF+R+G + PT Sbjct: 2 KIDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTP 61 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 A L I L + GAL ++ ++T +A + A +LP + + + P Sbjct: 62 LAQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGLDNIAP 121 Query: 145 QLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 + L + I D E++L+ + D ++D + T+ + L D +V+I L Sbjct: 122 NIQLASVHIERRDMESKLASGELDFVVDVLLPTSEQIYKKKLLNDELVVIYNPALSQLPE 181 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 E A H+L+ S + + +R + + + +++ ML Sbjct: 182 GFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYYAACQVASDNGMLLT 241 Query: 263 IPSRFYNLFSRCWP-LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +PSR+ ++ + +P L++ P ID +++++ D D+++ Sbjct: 242 MPSRYASILLQHFPTLQRSSLP-FKTSSIDVYLYWHESLNEDGANAWFRDMLQQ 294 >UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP1_SORC5 Length = 312 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 125/299 (41%), Gaps = 8/299 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L ID+NL+ +A+ + + AA+ + L+ A+S ++ +LR +F DPL IR G+ + Sbjct: 1 MNLSAIDVNLVIALDALLQERSVTLAARRVGLSQPAMSHALTRLRELFSDPLLIRVGRQM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGS-YDK---QRTITIATTPSVGALVLPVIYRAI 139 T+ A + ++ + + G +D R IA T V +++P + A+ Sbjct: 61 ALTSRAEAMTPQVTAIVHDLAGLFGETTPTFDPATSDRAFRIAATEYVELVLMPRLNAAL 120 Query: 140 KTHYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMF--CTNRTVQHHVLFTDNMVLICREG 196 P+L L P+ A + L + DL I ++ LF D + R Sbjct: 121 AQGGPRLALHLLPLDGRAVDALRSGEIDLAIGVFPQESLPPDLRRAPLFDDRFAGLARMS 180 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +P + D +T HV++ + + R T ++L + + Sbjct: 181 HPTARGQVDLQTYAALPHVVVPRRGAHDGVADDLIAARGIARHEAMTVPHVLLVPHAITA 240 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 SD++A + +R FS PL P I+ ++ +N + RDP + V+ + Sbjct: 241 SDLVATVATRLGRAFSSLVPLRTFDLP-FELPPIEIAMAWNSRTERDPARAWLRGVVTD 298 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 8/295 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + DLNLL + + + AA+ L L+PSA+S+++ +LR DPL +R G+G+ P Sbjct: 1 MSTADLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT---IATTPSVGALVLPVIYRAIKTH 142 T A+ L E + +++ AL D +R + + T+ P + + Sbjct: 61 TPRALELREQVGPLVQAAEAALRPVEKLDLERLVRMYTLRTSEGFVENFGPDLIARVAEQ 120 Query: 143 YPQLLLRNPPISDAENQ-LSQFQTDLIIDNMF-CTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L S+ + L DL + T ++ LF D + + R G+PL Sbjct: 121 APGVRLCFVQKSNKNSAPLRDGSVDLETGVVGKATAPELRVQALFRDRFIGVVRMGHPLS 180 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E H+L+ + + + ++ + +RQI T L SD++ Sbjct: 181 QGEMTPHRYATGKHILVSRRGFDRGMIDEALKPLGLERQIVTIVSGFSTALVLARASDLI 240 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 A +P R + P P + +I S+H++ DP + +R Sbjct: 241 ASVPERHTAKL--RAGMHSFPLP-IATPEITVSLHWHPRMDADPAHRWLRGCVRE 292 >UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYP7_9DELT Length = 312 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 112/311 (36%), Gaps = 15/311 (4%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 + L +DLNLL F+ + + + AA L +T SA+S ++++LR + D L +R Sbjct: 2 RTIHVDELAQLDLNLLVAFDVLAEERSVTRAAARLGVTQSAMSHTLRRLRGVLEDELLVR 61 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVI 135 G+ T A L + GL ++ AL +D +R + L LP + Sbjct: 62 TRGGMALTPRAAALVAPVRTGLTTLQRALADPEGFDPATSERHFRLTGPDLFELLYLPRL 121 Query: 136 YRAIKTHY--PQLLLRNPPISDAENQLSQFQTDLII------DNMFCTNRTVQHHVLFTD 187 + L + +QL + DL I + VL D Sbjct: 122 IAGFGASAGRLSVTLAHVAPRQLADQLETGELDLAITARMLDGREQPAQPGLMRRVLLRD 181 Query: 188 NMVLICREGNPLL--SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSY 245 R G+P L A+HV++ P + + + E R + Sbjct: 182 GWRCFVRAGHPALTKRGRLSLPRFLAASHVMVSPTGRGQGIVDVVLAEQDEQRTVAVRVS 241 Query: 246 NILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPI 305 + T + A+SD++ P+ L + P L + + +++ DP Sbjct: 242 SFATAPVVAASSDLILTAPASL-EAVVGHLGLVCVA-PPLPLPEHSVDMTWHQRLSEDPG 299 Query: 306 LHGVIDVIRNA 316 + + + A Sbjct: 300 HQWLREQLVAA 310 >UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZA2_VARPS Length = 317 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 133/303 (43%), Gaps = 10/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +IDLNL +F+A+Y + + A L +T SA+S +++++R F D LF+R G+ Sbjct: 1 MNINSIDLNLFLVFQAIYATRSVTLAGDRLGMTQSAVSNALKRMRERFNDALFVRSADGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 PT A L I +G+ ++ A+D +++ + R IA +++P + + Sbjct: 61 VPTPVAERLIAPIEEGIACLVQAVDQGRTFEPETSSRIFRIAVNDIGQLVMVPELISVAR 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + +S +A ++ Q D+ + + + LF + V++ + +P Sbjct: 121 GIAPGVRFETVDVSVAEARQRMLHGQIDVALGSWEAMGPSFYQQRLFDETFVVLMSKASP 180 Query: 199 L-LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFP--DRQINFTSYNILTIAALVA 255 L + + A H+ P+ S L+Q ++ R++ T+ + L + ++VA Sbjct: 181 LGTRERIELDDYLAAEHIAYRPQGTTDSQLQQTLERAGALDRRRVVLTAAHSLGLTSIVA 240 Query: 256 NSDMLAIIPSRFYNLF-SRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 S +L P+R + L + P + +++ +D + ++I Sbjct: 241 TSGLLLTAPARLAKAMVASRADLHSVDAP-FEVRPFEIRQQWHERFHQDSGNRWLRELIF 299 Query: 315 NAF 317 F Sbjct: 300 GLF 302 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 117/295 (39%), Gaps = 8/295 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + D NLL + + + AA+ L L+PSA+S+++ +LR DPL +R G+G+ P Sbjct: 1 MSTPDFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L E +SQ ++ L D RT T+ P + + Sbjct: 61 TPRALELREQVSQLVQDAAAVLRPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIARVGEA 120 Query: 143 YPQLLLRNPPISDAENQ-LSQFQTDLIIDNMFC-TNRTVQHHVLFTDNMVLICREGNPLL 200 P + LR P S+ + L DL + T V+ LF D + + R+G+PL Sbjct: 121 APGVRLRFMPKSNKDTAPLRDGSVDLDTGVVGEGTGPEVRVRALFQDRFIGVVRQGHPLC 180 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E HVL+ + + + ++ + +R+I AL +D++ Sbjct: 181 QGEITPARYAAGRHVLVSRRGTDKGPVDETLRAIGLEREIMTIVGGFAPALALARATDLV 240 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 A +P R + P +I S+ ++ D + +R Sbjct: 241 ATVPERHTGTLRD--GMHSFALP-FPAPEITVSLLWHPRMDADLAHRWLRGCVRE 292 >UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q210Z5_RHOPB Length = 301 Score = 286 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 116/291 (39%), Gaps = 6/291 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL +A+ + AA +NL+P A+S+ + ++R + DP+ +R G+G+ T Sbjct: 10 LDLNLLVTLDALLSEGSVAGAANRMNLSPPAMSRQLARIRHLMNDPVLVRAGRGLVATPR 69 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A + + Q ++ G + D +RT TI ++ I + P Sbjct: 70 AEAVRAQVRQLVQDAEGLVRGNADLDPATIERTFTIRSSDGFVGTFGAAIVELVVQQAPN 129 Query: 146 LLLRNP-PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 LR ++ + L + DL I + ++ LF D + + R +PL Sbjct: 130 ARLRFVGEGNEDVDSLRDGRVDLDIGVIDGMGPEIRLQTLFRDRYIGVVRADHPLAQETV 189 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 E HV + + + + R ++ N+ ++V+ SD + ++P Sbjct: 190 TIENFVAYPHVSVSRRGRFEGPVDTALALQGMRRTVSVAVANVADGLSIVSRSDHIVLLP 249 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 R + R + P + +E SI ++ +D + +R Sbjct: 250 GRIAAWYRRDF--HGFELPVVTDELPPISIAWHPRFEKDAAHRWLRTCVRE 298 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 286 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 124/294 (42%), Gaps = 6/294 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 ++DLNLL +F+A+ + AA+ LNL+ A S+++ +LR DP+F+R G+G+ PT Sbjct: 4 DMDLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGRGLVPTP 63 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 FA+ + LE G L +++ +RT I A + P + R P Sbjct: 64 FALRAAPQVRSLLEGAQGLLIDRKNFEPAELERTFVIRINEGTAASLTPALVRRFAAEAP 123 Query: 145 QLLLRNP-PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS-L 202 ++R ++ + L DL I + V +L+ + V + + +PL Sbjct: 124 NAVIRCVGEGNEDVDSLRNGSIDLDIGADPLPSSDVCSEILYREGHVGLVSKSSPLARTA 183 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 + + HV + + + + R++ + + A + A+SD++A+ Sbjct: 184 QPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVASPVAAALMAADSDLVAL 243 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +P R F+ + P+ + ++ DP + + +R A Sbjct: 244 VPERLARYFAARLDVAWFAVPT-ELPAVTIHQQWHGRLDHDPAHKWLREQVREA 296 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 74/311 (23%), Positives = 142/311 (45%), Gaps = 20/311 (6%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L IDLNLL + + + + + AA L+L+ SA+S+S+ +LR DPLFIR Sbjct: 1 MNLDNLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTA 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 G+ PTA A L + + L+ + L S++ +R + A S ++P Sbjct: 61 HGLKPTAHAALLGQQLPDMLQGLYQ-LTQPPSFNPASSRRQFSFAMVESAYETLIPYFIG 119 Query: 138 AIKTHYPQLLLRNPPISD-AENQLSQFQTDLIID----------NMFCTNRTVQHHVLFT 186 + + P L L + ++ + + L + Q D I + + H LFT Sbjct: 120 PLLNNAPNLRLDSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTLFT 179 Query: 187 DNMVLICREGNPLL----SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINF 242 D+ V + R+G+P+L + + D + +HV + E + L + + R ++ Sbjct: 180 DHQVCLVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLST 239 Query: 243 TSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLR 302 T + A++ A+SD++ +PS F + + LE+LP P + + + + +++ + Sbjct: 240 TVPDFYGAASVCAHSDLIFTLPSSFAAHARKLYALEELPLP-FDFHSLAYVLLWHERNDD 298 Query: 303 DPILHGVIDVI 313 +P + + I Sbjct: 299 EPGHKWIRETI 309 >UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=cellular organisms RepID=A1UXD8_BURMS Length = 355 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 131/283 (46%), Gaps = 5/283 (1%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY 95 +F+A+ + + AA L+++ A+S ++ +LR +PLF R +G+TPTA A L+E Sbjct: 59 VFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEP 118 Query: 96 ISQGLESILGALDIEGSYDKQRT--ITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPI 153 + Q L + L + ++ ++ ++LP + IK+ P ++L Sbjct: 119 VRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQSD 178 Query: 154 S--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDN 211 QL+ DL ID + N + + L +++V+I R G+P + + Sbjct: 179 DAGSIPAQLTTGTLDLAIDYLHFDNPELCYEPLHEEHLVVIGRAGHPAFAGGLALRGYEE 238 Query: 212 AAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLF 271 + HV + P ++ S L + R ++ + LTI ALVA SD+L IP R F Sbjct: 239 SGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLGTIPRRLAERF 298 Query: 272 SRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + + L+ P P ++ I S+ +++ P L + + + Sbjct: 299 ADVYALQIAPLP-IDIAPIQVSLIWHRQQDAQPGLRWLREQVV 340 >UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B1S8_9BURK Length = 319 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 134/311 (43%), Gaps = 9/311 (2%) Query: 12 SRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIF 71 SR + T++ ++DLNLL +F+A+ + + A + L L+ A+S S+ +LR +F Sbjct: 3 SRINLTNSGGCMTSVDHLDLNLLRVFQAIVEERSLTKAGERLALSQPAVSYSLGRLRTLF 62 Query: 72 PDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVG 128 DPLF+R G+ PT A+ L + + L+ + AL +D RT ++ + + Sbjct: 63 DDPLFVRTRAGMQPTPVALELAGIVGKALDMVRVALRYAERFDPATSTRTFRLSLSDAGE 122 Query: 129 ALVLPVIYRAIKTHYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFT 186 LP I RA++ P++ L P+ E L + D I N+ +H +LF Sbjct: 123 MAYLPAICRALRERAPRVTLSVQPMPVEAIEEALRASRLDFAIGNLPELMPRTRHQLLFE 182 Query: 187 DNMVLIC--REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTS 244 + V + R G P E AAHV + E + L ++ R + Sbjct: 183 ETYVCMTGRRRGLP-SGTTLTLEQFVRAAHVNVKSVEHSHHALDDALRAQGVGRNVALEV 241 Query: 245 YNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 + + + ++ +D+ A +P R + +R + ++H+++ D Sbjct: 242 PHFVALPGVLQVTDLYATLPKRLAQILNRDNAFRLYAL-PVPLPPAPVTMHWHEHFHEDE 300 Query: 305 ILHGVIDVIRN 315 + + ++ Sbjct: 301 GITWMRALLAE 311 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 16/311 (5%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 K L IDLNLL + + + AA L L+ SA+S+S+ KLR F DPLF+R Sbjct: 13 KLMQIEKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVR 72 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVI 135 G+ T A+ L + + + L + Q IA SV L++P Sbjct: 73 TSYGLNATPKALFLKPKLDVLVNQLE-LLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYF 131 Query: 136 YRAIKTHYPQLLLRNPPISD-AENQLSQFQTDLIID----------NMFCTNRTVQHHVL 184 I H P L + ++ +L + D + + + Sbjct: 132 LPTIFRHGPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEI 191 Query: 185 FTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTS 244 + DN + R G+P+L + + + N HV + + + L R+ ++ +R I T Sbjct: 192 YRDNQRCVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITV 251 Query: 245 YNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDP 304 + + A+L +D + PS F + ++ L +LP P + + +++ +++ DP Sbjct: 252 PDFNSAASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLP-MEFPPMAYTLFWHRERENDP 310 Query: 305 ILHGVIDVIRN 315 L + ++I+ Sbjct: 311 ALRWLRELIQT 321 >UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=Proteobacteria RepID=C4I668_BURPS Length = 297 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 10/285 (3%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY 95 +A+ + AA LNL+ ++S + KLR IF DPL + +G+ PTA A L E Sbjct: 14 TLDALLSEHNVTRAAARLNLSQPSVSIHLAKLRDIFGDPLLLPGPRGMRPTARADELREP 73 Query: 96 ISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPP 152 + + LE++ A+ +D T +A + + V+ ++ P L Sbjct: 74 LRRALETLGRAVSPGAPFDPAASAHTWRVAASDYSESTVVLPALNGLRAAAPGTRLAVVE 133 Query: 153 I--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETID 210 S Q Q DL C ++H LFT+ VL+ R G+P L Sbjct: 134 TVPSRIAKQAEQGDIDLAFHITECAPGNLRHRALFTERYVLVGRAGHPRLKRRPTLAQFC 193 Query: 211 NAAHVLLLPEEQN-FSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYN 269 HV++ P+ G Q + ++ R++ + + L + + VANSD++A++PSR Sbjct: 194 KLDHVIVSPDGGGFQGGTDQALAKLGLARRVVLSVPHFLFMMSAVANSDLVAMMPSRLVR 253 Query: 270 LFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 L+ + P ++ ++ +++ S RDP + + I Sbjct: 254 ---DSRALQVVE-PPVDVPGFRMAMLWHERSHRDPAHQWLREHIA 294 >UniRef50_B7RV99 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV99_9GAMM Length = 303 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 123/299 (41%), Gaps = 10/299 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L +DLNL +F+A+Y + + A+ L+LT A+S ++ +LR F D LF+R +G+ Sbjct: 1 MRLDKVDLNLFVVFDALYRERSVTRVAQALHLTQPAVSNALSRLRQSFDDQLFVRSPRGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A + + + L + +D + T + + +VLP ++ A+ Sbjct: 61 QPTPVAEAISVDVQKALGLLQKTTLSGQRFDPGSAEMTFRLGMSDVAQNMVLPGLHNALA 120 Query: 141 THYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + + A QL DL++D R + L + + + +P Sbjct: 121 QLAPGVTIEAYYLDRASAVAQLKSGDLDLLLDAPQVNARELGQLHLGSLLYRVAMAKAHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L ++ D + A HV + + + + + R++ AA+ A SD Sbjct: 181 LAQVDLDIDQYLAAKHVHVSARPRGRGQVDLALHAIGHRRKVVVRVQQYAVAAAITAQSD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 +L P + L + P E + ++++++ + DP + ++ F Sbjct: 241 LLWTAPGSVIDH----PELHVVETP-FQVESLVLNLYWHRSAAEDPANAWMRKMLAQQF 294 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 116/290 (40%), Gaps = 5/290 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR +DLNLL + +A+ + AA+ L ++ A+S+++ +LR+++ DPL IR QG+ Sbjct: 1 MNLRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PTA A L + + L I D + + I V +++P + ++ Sbjct: 61 EPTARAEALLLPLREILHDIEQTFSPPEQLDPAQFEGVLRIGAHTYVEYVMMPSLLARLQ 120 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P L + P++ D E+QL + ++I + LF D ++ +PL Sbjct: 121 QQAPNLRIHMVPLNADYESQLDEGVISMVISKQDEVPGRFRRIPLFEDKLICAAHRSHPL 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 E+ A H+L+ P + + R + L ++ + + Sbjct: 181 QGQVLCIESFAQAQHLLVAPRGSEGGIVDDLLAAHGMTRHTPLIVQSFLAAPFILPCAPL 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 L P+R L + + S+ ++ + +L+ Sbjct: 241 LLTSPARVLRPLMPLLDLVEYET-RFALPTFEVSLIRHRRDDNNAMLNWF 289 >UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C5CVL6_VARPS Length = 327 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 124/297 (41%), Gaps = 8/297 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 IDL+L+ + V + + AA L + A+S ++++LR + DPL +R G G+ P Sbjct: 7 FDKIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGSGMVP 66 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T + + E + L + ++ Q T IA + + L LP++ +K Sbjct: 67 TDAGLRMIEPAASILRAAEMLFSDARGFEPQSAATTFRIAASDYMDPLFLPMLVAHVKRE 126 Query: 143 YPQLLLRNP---PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + P SD L+ Q DL+I N + LF D +V + + +P Sbjct: 127 APLCQIEIHALTPDSDYHGHLALGQVDLVIGNWLKPPEDLHMARLFGDEVVSLVNQDHPA 186 Query: 200 LSLEDDRETIDNAAHVLLLP-EEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + D ET A H+ P + Q + E+ R I + I +VA+S Sbjct: 187 VRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFSLIPDMVASSL 246 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++ ++ F+ P++ L P + ++ + +++ + + + I++ Sbjct: 247 LVLTTGRQYCERFAARLPVKILECP-VALPRLMYYQLWHERTHSSSSARWLRECIKD 302 >UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C385_DELAS Length = 332 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 64/311 (20%), Positives = 133/311 (42%), Gaps = 8/311 (2%) Query: 12 SRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIF 71 S + ++G P+ LR+IDLNLL IFEA+ + + AA L +T SA+S ++++LR F Sbjct: 3 SIQHADGAPRAPVNLRSIDLNLLVIFEALVEERSVGKAAARLGITSSAVSHALRRLRTQF 62 Query: 72 PDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVG 128 DPL +R +G++PT A+ L + I A+++ +D +R + + VG Sbjct: 63 NDPLLLRTAEGMSPTPEAVRLARSFRKAFSEIESAIEVSKGFDPATARRNFHLRLSDYVG 122 Query: 129 ALVLPVIYRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFT 186 L+LP + ++ P + L +++ ++ + + L Sbjct: 123 VLLLPQLCIHLRAVAPGISLSVQSFDGRQPSDRVEYEGVEIRLSVSRGRSVLSASRRLLD 182 Query: 187 DNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYN 246 D +++ R+ +P + E H+ + S + + + E R++ F Sbjct: 183 DQWMVLMRKDHPAAASPLTLEKYLEQGHLKVT--GVGSSIVDELLAERGLARRVMFQVPT 240 Query: 247 ILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPIL 306 L + ++ ++D++A +P+ + + P P + ++ + D Sbjct: 241 WLGMVPVIESTDLVAAMPAHWMHSVLSGSNCVARPMPLPEL-ALSIDAVWHPRNDHDAGH 299 Query: 307 HGVIDVIRNAF 317 ++I F Sbjct: 300 KWFRELIHQIF 310 >UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAE3_OLICO Length = 311 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 119/303 (39%), Gaps = 11/303 (3%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L +DLNLL +F+A+ + AA L+L+ A+S ++ +LR + DPLF+R Sbjct: 9 MHQKNLARLDLNLLVVFDAIASARSTTLAATQLSLSQPAVSHALSRLRRLIGDPLFVRGR 68 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 T A + + L ++ G + +D +RT IA + ++P + R Sbjct: 69 GRFVLTPRAEGMVLQVRDILNAV-GVVLANAPFDPAENERTFRIAASDYTMLTIMPTLVR 127 Query: 138 AIKTHYPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 + P+ L + S QL D + LF ++ Sbjct: 128 TLHRASPRAKLEVFSVGSQTIAQLESNDLDCTFWALKPPGAPYVTMPLFRESSKGFLDRR 187 Query: 197 NPLLS----LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 +PL + HV+ + N S + + + R I S + + Sbjct: 188 HPLAKPANRGRLTLDDYVGYPHVIAKFRDSNPSPVDVALAAVGRKRTIGLASSSFIGNIT 247 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 ++ ++++A +PSR + + + L+ P + E +S+ +++ + DP + V Sbjct: 248 ALSGTNLIATLPSRL-SSIAESYGLKSFDLP-IRIEDYTYSLVWHQRTDADPACIWLRKV 305 Query: 313 IRN 315 I Sbjct: 306 IAQ 308 >UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYN1_9GAMM Length = 303 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 131/300 (43%), Gaps = 8/300 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLLT+F+AV + AA+ + ++ A+S ++ + R I D LF R G+G+ Sbjct: 1 MNLRSVDLNLLTVFDAVITEGSVTRAAEKIGMSQPAMSIALTRFRHIAKDELFERTGRGL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 PT A+ L I + L+ + AL+ +D R+ ++ + ++LP + R ++ Sbjct: 61 RPTPRALELAAPIRRALDIVTDALEHGTDFDMSRSDRSFSVVLSGIGEIVMLPTLMRRLE 120 Query: 141 THYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + ++ + R+ D ++ DL + + + + + + V + R +P Sbjct: 121 STGSRININTRHVAHGDMLKEMHFGNVDLYMWIVPIESSEIICTQIGNTSEVCLVRADHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQ-NFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + HV S + + + + R+ + + ++ +++ + Sbjct: 181 YVGDSLSVNEFAALRHVTFHMPGTYGPSIIDRELWRLGLKREHSMSVHSYFDAPRVLSQT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 DM+ +P F+R L+ + P L E + + K + +D + + + + F Sbjct: 241 DMVCTMPRVLGRHFARVHGLKMVRSP-LQLE-FPVFMLWPKAAEKDKGHQWLRETLIDIF 298 >UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=Rhodobacterales RepID=Q5LN55_SILPO Length = 331 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 123/303 (40%), Gaps = 13/303 (4%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 R DLNLL + +A+ + A + L ++ A+S ++ +LR DPLFIR+G+ + Sbjct: 1 MNFRTFDLNLLRVLDALLSTRSTTRAGQQLGMSQPAVSAALSRLRHALGDPLFIRQGRQL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT +A LH + L L + +D ++T++ + L++P + R + Sbjct: 61 VPTDYAGGLHAPLRDLLGQTEALLAGQPDFDPGAATDSLTLSGSDFYAELLMPRLARHLS 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + ++ + + + Q D+ I T V+ L + + + + R +P Sbjct: 121 HVAPGMRVQLVDLVPDNYVQSVGQSAVDMAILPATPTPDWVEERRLHSSHFLAVARADHP 180 Query: 199 LLSLE-------DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 ++ + + H L PE + + + RQ+ T + Sbjct: 181 EIASAAIAPGAVLPLDLFCSLQHALFSPEGKLHGLGDAALARIGRARQVTMTLPVFSGVL 240 Query: 252 ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVID 311 V+ SD++A+IP + + L P + ++ + ++K + P + D Sbjct: 241 NAVSQSDLIALIPHQLAESVAPRLGLSLYH-PPIPVGPVEIMMVWHKRASTAPAHRWLRD 299 Query: 312 VIR 314 I Sbjct: 300 QIA 302 >UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A4JED2_BURVG Length = 308 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 126/297 (42%), Gaps = 5/297 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +DLNLL +A+ + I AA+ ++L+ SA S ++ +LR F D L ++ G+ + Sbjct: 1 MRFNKLDLNLLVALDALLSEQNISRAAEKIHLSQSATSNALARLREYFDDELLVQVGRKM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 PT A L + + L + + + + R + + ++P ++R Sbjct: 61 EPTPRAEALKDAVRDILVRVDATVTAQPEFVPAQACRLFRLFVSDYTMTTLIPHLFRLAY 120 Query: 141 THYPQLLLRNPP-ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + P ++ L + + DL+I + VL + + E +PL Sbjct: 121 AQAPGIGFDLRPQVAYPHRVLERGEADLLIIPKEYCSTEHPAEVLLEETFCCVLWEHSPL 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 E +E A H+++ E + +Q + R++ ++Y+ L+ A L+ ++ Sbjct: 181 AKGELTKERYMGAGHIVVQVGEGQTALEAWFMQRLGVVRRVEASTYSFLSPAHLLVGTNR 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +A + R +R PL P L ++ S+ ++K D L + +++ A Sbjct: 241 IATMHRRLAEAAARDLPLVLRDVP-LTVPTMEQSVQWHKHRTSDQGLMWLRALLKEA 296 >UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4T0_ACAM1 Length = 307 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 118/284 (41%), Gaps = 9/284 (3%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG-QGVTPTAFAMHLHE 94 F+ + + AA+ LN++ SA+S ++++LR + DP+ IR + + T +A+ + Sbjct: 18 AFDILVQEASVTQAAEKLNMSQSAMSHALKRLRAVLKDPILIRTSQRQMEVTPYALEISP 77 Query: 95 YISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRN- 150 + Q L I L + ++ Q IAT V A + + + + P + +R Sbjct: 78 QVRQILAEIQETLLAKDVFNPATAQEDFRIATNDYVEATLSANLLQQLTQQAPGIQIRVK 137 Query: 151 -PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETI 209 L DL I R L+ + V + + PL E E Sbjct: 138 GLNKDAVLAALDDNSIDLFIGAGLDLKRWHVQESLYQEEFVCVLQSDCPL--TELSLEQY 195 Query: 210 DNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYN 269 H+L+ ++ +++ RQ+ +++ + + + L+ANSD +A++P R Sbjct: 196 VERTHILVSFQDDFRGIGDLILEQQQQSRQVVWSTPHFMVVPFLLANSDCVALLPKRMAE 255 Query: 270 LFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 ++ L+ LP P ++ + S+ +++ P + Sbjct: 256 RCAKEMGLKLLP-PPIDVTRFTVSMIWHQRHNNRPQHQWLRKQF 298 >UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAM0_9RHOB Length = 312 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 123/299 (41%), Gaps = 6/299 (2%) Query: 22 IFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 + + +DLNLL + + K + AA+ L L+ SA S ++ +LR F D L ++ G+ Sbjct: 1 MDMRFKGLDLNLLVALDVLLREKNVSRAAEKLFLSQSATSGALARLREYFNDDLLVQVGR 60 Query: 82 GVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRA 138 + T A L + L I G + +D R + I ++ + VL R Sbjct: 61 QMVLTPRATALSGKVRSALVQIDGTIIQSPEFDPSTAVRILRIISSDFITISVLREAVRE 120 Query: 139 IKTHYPQLLLRN-PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 I P L + P + ++ + + DL++ + FTD+ V+I GN Sbjct: 121 IGKSAPGLTIDIQQPANKPHEKIERGEVDLLLMPELYISPDHPSEQFFTDDYVVIAWSGN 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQ-EMFPDRQINFTSYNILTIAALVAN 256 + A H ++ E S +Q + +R I + + ++ Sbjct: 181 TQFGDTITEDQFFAARHATVMFESHTPSYEAWFIQNKDGRERDIAIVVGSFSALPFMIEG 240 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +D LA++ ++F+R PL L P ++ + SI ++ +S D L V + I Sbjct: 241 TDYLALMHRSMADIFARQMPLRLLRCP-IDIPPLVESIQWHTYSDGDECLAWVREKIHE 298 >UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8Q8_MARAV Length = 312 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 11/297 (3%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 N DLNLL F A+Y+ + + A + L+L+ ++S ++ +LR +F DPLFIR Q + PT Sbjct: 4 NYDLNLLRTFHALYLEQNVTRAGERLHLSQPSVSAALGRLRELFKDPLFIRDRQRMRPTE 63 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 A HL I L + G + E + QR IA L+LP + ++ P Sbjct: 64 TADHLFPVIEAALTDLDGLITSERDFSPATEQRHFEIAANDYFEVLILPALASVLREQAP 123 Query: 145 QLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL-- 200 + L+ +S +E + TDL + + + + + +PLL Sbjct: 124 GITLQVRRLSQDMSEAGIMSGTTDLAFGRQVDPPDNLVVREVILEGIECLVGNEHPLLER 183 Query: 201 ---SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + + R+ + AHVL+ P + SG+ ++++ R++ + + AL+ S Sbjct: 184 LKGNGQMTRDDFERYAHVLIQPHTRLKSGIFKQLESQNLKRKVALAVTYFMAVPALLEGS 243 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 ++A +P+ F R + + + P + + F + ++ +DP + + I Sbjct: 244 SLIASLPTGLCQHFRRQFAVTPVA-PPVAFDAFPFHLSWHHRYQKDPAHRWLREQII 299 >UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZY6_VARPS Length = 325 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 9/293 (3%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +D++LL + A+ + + AA +N T AIS ++++LR F DP+ +R+ G+ PTA Sbjct: 8 VDIHLLRVLAALVAERSVSRAAVRMNQTQPAISAALRRLRDAFGDPILVRERGGMVPTAR 67 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ L E + L I L ++ T TIAT + A + + + PQ Sbjct: 68 ALQLRESAREVLGEIDRMLAGPERFEPGASTMTFTIATPDYLAASFMAEVVARFRAEAPQ 127 Query: 146 LLLRNPPIS---DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS- 201 L P++ D E L+Q + D++I N + +L D +V + GNPL + Sbjct: 128 ARLLIHPLTPGYDYERALAQGELDIVIGNWPLPPERMHLSLLIEDELVCMMSPGNPLAAP 187 Query: 202 LEDDRETIDNAAHVLLLP-EEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + AAHV+ P + + + + + + R LVA SD++ Sbjct: 188 GAMTLQRYLAAAHVVPTPFAKSHRAVVDSHLAGLRQTRDARVFVPYYAMAPYLVAESDLV 247 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 F F+R P+ + P ++ F +++ S + ++ Sbjct: 248 FTTARHFAEQFTRSLPVVSVAAPE-GFPRMRFYQLWHERSQHQGAHRWLRSLL 299 >UniRef50_A6FY23 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY23_9DELT Length = 339 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 107/283 (37%), Gaps = 8/283 (2%) Query: 42 VHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLE 101 + AA+ L L+ A+S ++ +LR F DPL +R G+G+ T A L + L Sbjct: 21 QTSSVTGAARRLGLSTPAVSHALARLRERFGDPLLVRAGRGMVLTPRAEQLRPRVRDALS 80 Query: 102 SILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLR-NPPISDAE 157 + G+++ +R+ T++ T V + ++ P + LR D Sbjct: 81 LATLVFEDPGAFEPASMERSFTLSMTDYVLRVFGGPFEARVRAAAPGVDLRVIVNAVDDA 140 Query: 158 NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL---SLEDDRETIDNAAH 214 +L TDL++ ++ + ++ +V + RE +P+L H Sbjct: 141 ERLRAGDTDLVVGIYGALPPELRTRAIISERLVCVVREAHPVLAPTKRRLTLRQFVTLEH 200 Query: 215 VLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRC 274 V + P Q + R+ E+ R++ + A+SD L + R Sbjct: 201 VQIAPRGQPGGYVDDRLAELGHARRVARAVPFFQLALEMTASSDYLLTVSERIARQLGPE 260 Query: 275 WPLEKLPFP-SLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 L L P L E S+ ++ D + + + + Sbjct: 261 LGLRVLEPPSELGLEPYALSMVWHPRFDADAGHRWLREQLVES 303 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 283 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 123/302 (40%), Gaps = 13/302 (4%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 +L DLNLL + +A+ K + AA+ L +T A+S S+ +LR IF DPL +R G+ + Sbjct: 4 SLTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGREME 63 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYRAIKT 141 T A L + + L + AL E S+D T IA T +LP I R + Sbjct: 64 LTVRARALAGPVREALLMVKAALGSEESFDPAETKCEFRIAMTDYCSMTILPRIVRELSA 123 Query: 142 HYPQLLLRNP-PISDAENQLSQFQTDLIIDNMF-------CTNRTVQHHVLFTDNMVLIC 193 P + L ++ + ++L + D ++ + ++ F D + Sbjct: 124 RAPGIELAVEGLVNKSFDRLETGEIDFLLTVVERTLLMHSRHPDMLRGADAFEDCYTCVV 183 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 +P E + + E F+ R + D+ + + ++ Sbjct: 184 AADHP-FDGALTPEDFRAYPNATVSFGENTFTTDRAAYEHGGLDQSPALIAPSFSSLLFQ 242 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + + ++ +P+R +F+ + L P + + ++++ S DP + ++I Sbjct: 243 LQGTTLIGTVPNRLAEMFAPMLGVRLLE-PPIRLPTLTERLNWHVRSDADPGHSWMRNLI 301 Query: 314 RN 315 + Sbjct: 302 LD 303 >UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W028_MARMS Length = 309 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 131/299 (43%), Gaps = 7/299 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL + + + I A+ LN++PSA+S S+ +LR F D L + G+ + Sbjct: 1 MRFKKLDLNLLVALDTLLTEQSITKGAEKLNMSPSALSNSLSRLRDYFEDDLLTQIGRRM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 T +L + L +I + ++ S++ Q R +I + +++P + Sbjct: 61 VITPLGENLKVSVRNALNNIESTILVQPSFEPQTTDRIFSIFCSDYTQTVLVPHALEIVG 120 Query: 141 THYPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + ++ QL Q + DL+I + +L+ + V + + + Sbjct: 121 KQKSTARFQLLAQVANNPHEQLEQGKADLLIIPSDFMSTEHPCDILYEEEFVCVVWKHSK 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRV-QEMFPDRQINFTSYNILTIAALVANS 257 + S E E A HVL+ PE Q+ R + T+++ ++ ALV S Sbjct: 181 IASGELTAEKYAAAGHVLMRPEATKKDFFGTLFTQKYGIKRHVIATTFSFASLPALVIGS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + +A I +R ++ WPL+ LP P + + + ++++ D L + + ++ A Sbjct: 241 ENIATIHARLATKMAKVWPLKILPLP-FDIPPMKQCVQWHQYRNNDEGLIWLRNTLKEA 298 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 131/322 (40%), Gaps = 30/322 (9%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +DLNL+ +F+AV + ++ A++ L+L+ SA+S ++ +LR +F+R G+G Sbjct: 20 MIAFDKLDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKG 79 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEG-SYDKQ---RTITIATTPSVGALVLPVIYRA 138 ++PT++A+ + + L S+ AL + Q R+ IA V A +LP + Sbjct: 80 MSPTSYALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSATLLPQLNHQ 139 Query: 139 IKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHV-LFTDNMVLICRE 195 + P + L+ P + D Q+ + D+ I + LF D V IC Sbjct: 140 LSKVAPGIDLQITPATRLDLAEQIDLGRIDVAIGTFRSVPERFRTKPVLFQDE-VFICSG 198 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQN---------------------FSGLRQRVQEM 234 +P+ + + + + ++ + + L Q + E Sbjct: 199 THPISANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTALEQALNEA 258 Query: 235 FPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSI 294 + + L + L+ S++LAI+P F+R + P P Q + Sbjct: 259 GLSMRRQIVLPHFLALPMLLEGSELLAIVPQPLARTFARTLGFKIKPLPYPAARQ-QLDL 317 Query: 295 HYNKFSLRDPILHGVIDVIRNA 316 ++ + DP + + I A Sbjct: 318 IWHSSNDNDPAQLWLHEQISEA 339 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 126/298 (42%), Gaps = 7/298 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +D+ LL +F+A+ + + AA + LT SA+SQ + +LR IF DPLFIR G+ Sbjct: 5 PRVDTLDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRTANGM 64 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A+ L +++ L + + ++ +R +A + + LP + R I+ Sbjct: 65 EPTPHALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVVRRIR 124 Query: 141 THYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P L + + + ++ DL + + LF + + + NP Sbjct: 125 EIAPNLRITIVHVGPRGGQREIESGSADLALGVFQQPPIGISTCELFRYTLQCVADKNNP 184 Query: 199 LL-SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 L R+ A+H+ + + + V+ + R+I + + ++I LV + Sbjct: 185 RLKQGTMSRDEYLEASHIAVGENNVPGTLVEVIVEALGLKRKIALVTPHFVSIPNLVLGT 244 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 D++ PS + + L P P E I ++ ++ DP + ++ + Sbjct: 245 DLIGTFPSSAQDAYPFSNQLCFFPIPFPISESIAMAM-WHPRFDGDPGHMWLRNLFAD 301 >UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J825_AGRRK Length = 333 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 101/303 (33%), Gaps = 9/303 (2%) Query: 21 QIFTT---LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFI 77 LR IDLNLL F + + + AA+ L L +S ++++LR D LF+ Sbjct: 1 MAMMNDAALRKIDLNLLLAFSVLMQERNVSRAAERLLLGQPGLSAALRRLRETLDDELFV 60 Query: 78 RKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPV 134 R G+G+ PTA A+ + I L I A+ ++D Q + ++ + Sbjct: 61 RVGRGLQPTARALSIAPAIEDALSGIERAIRPPAAFDPSSWQGEFRVGMCDNLESDFFGP 120 Query: 135 IYRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLI 192 + ++ P L +A L + D I LF I Sbjct: 121 LAARLRGLAPNARLTGVAFDKREAGRLLDEGAYDFSISVHDEPASWHIRAPLFNQASACI 180 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 + L E A H+ + E + + + + RQ+ T + Sbjct: 181 YDPRHIRLDAPLGLEDFAKADHITVSLEGNTLTNVDLALARVGYHRQVVATVPRYSALPM 240 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 + +A IP ++ L P L+ ++ Y + D + Sbjct: 241 ALRAMPAIATIPESIARCMAQLHNLTVSQ-PPLDLPADPVTMLYRRVDQADSRAVWFRRL 299 Query: 313 IRN 315 Sbjct: 300 FVE 302 >UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RUJ7_SEROD Length = 313 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 119/298 (39%), Gaps = 6/298 (2%) Query: 22 IFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 + T + +N+L + AV + + +AA+ LN + +S+ + +LR F DPL +R G+ Sbjct: 1 MRTQFAALSINMLQVLHAVLTTRNLSHAAEKLNSSQPQLSRQLAQLREAFGDPLLVRHGR 60 Query: 82 GVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRA 138 + + + + + + L + ++ R A++ V +LP + Sbjct: 61 EYVLSPRGQEIILPLEKLINELKE-LSQKPEFEPLLCSRCFRFASSDYVAEHMLPQLVDY 119 Query: 139 IKTHYPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 ++T P++ + + L+ + DL + ++ +L D V + + Sbjct: 120 LQTVAPKVSVEYFTWKPNDYPLLANAELDLATTMIKEAPSGLRGRILGEDVPVCVMSARH 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 L + + + HV + S + + ++E RQ+ T +V++S Sbjct: 180 VLAGKALEAKDYASWRHVRVSGGGDKDSFIDRELKEYGIYRQVALTVPFFSAAMEVVSSS 239 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++L IP + + + + +E + + +++ + P +V+R Sbjct: 240 NLLVTIPKHIAIMMAGKYNVTWCSI-DFVKESHRYWMIWHERTHMAPEHKWFRNVVRE 296 >UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=A3YHF6_9GAMM Length = 308 Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 126/291 (43%), Gaps = 4/291 (1%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + DLNL+ IF+A+ K I +AA L +T ++S ++ ++R + DPLF+++G+G+ P Sbjct: 1 MAKTDLNLVVIFDAIMKEKSITSAADSLAMTQPSVSNAVSRMRHAWKDPLFVKEGRGIRP 60 Query: 86 TAFAMHLHEYISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRAIKTHY 143 T +A L + +++ L I A+ + + I T ++V P + I+ Sbjct: 61 TPYATKLWKRVAEPLAQINHAIAPEYFDPLTSKASFRIGITDGSASIVWPELRHIIEQEA 120 Query: 144 PQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 P + + P D E L+ DL+ D + + + ++ + V + R + L + Sbjct: 121 PNINIYAVPYKVDGELLLNNADVDLVFDYYDGNSDEIFYKSMYENQFVTVMRADHELANE 180 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 E E + H+L+ + ++ E+ R+ T + + L+ + ++ Sbjct: 181 ELTLERYIKSEHLLVSLSGDVCGIVDDKLAELNAKRRTAMTVNSFASAINLIKQTRLIIT 240 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +P L P P L I S+ ++ + L +I V+ Sbjct: 241 MPYPIIAEHLAAGDLVLKPVP-LELPSIKISLAWHSRNNHSQALKWLIKVL 290 >UniRef50_A7JRS0 Possible LysR family transcriptional regulator n=3 Tax=Mannheimia haemolytica RepID=A7JRS0_PASHA Length = 302 Score = 282 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 121/297 (40%), Gaps = 9/297 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + +R +D NLL F + + AA+ L++T A+S + +LR F DPLF+R G Sbjct: 1 MSDIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNRLRESFNDPLFVRVQHG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRAIK 140 + PT A+ L + L+ I L T+ IA V ++ + ++ Sbjct: 61 MQPTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIAAMDYVQQIIALPLILRLR 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + P+ + + Q + DL + + + VL+ + V + +P Sbjct: 121 RLAPNVKVALLPVQGQNIKTLFEQKKIDLALVSRQHLSTDTLKTVLYEERYVCAMSKTHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLP-EEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + + N +L + +Q++ R++ + +I + L+ S Sbjct: 181 MAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIGLQRKVMVSVNHISLLPQLLQGS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 D++A++P R + L P + E + +++ + +D + +V++ Sbjct: 241 DLVAVLPERLAKTLPNVY----LQPPPIEVEGFTMMMAWHERTEQDTAHRWLREVLQ 293 >UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SW87_9BURK Length = 330 Score = 282 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 131/303 (43%), Gaps = 10/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +IDLNL +F+A++ + + A + L +T SA+S +++++R F D LF+R +G+ Sbjct: 1 MNIHSIDLNLFLVFQAIFATRSVTLAGERLGMTQSAVSNALKRMRERFNDVLFVRSAEGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 PT A L + +GL + A+D +++ R IA +++P + + Sbjct: 61 VPTPLAERLIGPVEEGLAAFSQAVDQGRTFEAGTSGRLFRIAVNDIGQLVMMPRLLSLAR 120 Query: 141 THYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + P ++A ++ Q D+ + + + LF + V++ +P Sbjct: 121 GLAPGIRFETVDVPRAEARQRMLHGQIDVALGSWEPMGPSFYQQRLFDETFVVLVARASP 180 Query: 199 L-LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFP--DRQINFTSYNILTIAALVA 255 L + A H+ P L+Q ++ + R++ T+ + L ++++VA Sbjct: 181 LGTRDSIALDDYLAAEHIAYRPRGTTDHQLQQALERVGALDRRRVVLTAAHSLGLSSIVA 240 Query: 256 NSDMLAIIPSRFYNLF-SRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + ++ P R + L L P + S +++ +D + +++ Sbjct: 241 TTGLVLTAPQRLAQAMVASRSDLHILNAP-FEVAPFEISQQWHERFHQDSGNRWLRELMF 299 Query: 315 NAF 317 F Sbjct: 300 GLF 302 >UniRef50_P52679 PCP degradation transcriptional activation protein n=1 Tax=Sphingobium chlorophenolicum RepID=PCPR_SPHCR Length = 307 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 8/298 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + L L +F+A+Y H AA L++ +S+ + +LR F DPLF+R G+ Sbjct: 1 MNDSVLPLGHLMVFDALYRHGSAGKAAHALSMPQPTLSRWLAQLRTHFDDPLFVRTRSGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A +I++ + + E +D R IA + AL+LP +Y ++ Sbjct: 61 EPTPLAARAAPHIAEMIAIYRQHVRSELRFDPGTSNRNFRIAASDFGQALMLPRLYATLE 120 Query: 141 THYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 PQ+ + + +L D+ + ++ LF + V + R+ +P Sbjct: 121 ETAPQVRVTGVNLRHGPLVEELESGSIDIAFGGFPTLSAGIKTQTLFREEYVCVMRQSHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPE--EQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 L+ D E H+++ + R+ E+ P I FT+ N L A + Sbjct: 181 ALTHGLDLEAFRQCRHIIVTAHEFNHVHEQVEARLLELLPPESIRFTTENFLVSAVIAEE 240 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +D++ IPSR F+ L P P + I+ ++++ +DP + VI Sbjct: 241 TDVILTIPSRLARWFANRGGLTIFPVP-IELPSIEVKQYWHERYDKDPGNIWLRRVIA 297 >UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391Q9_BURS3 Length = 322 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 117/300 (39%), Gaps = 10/300 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 R +DLNLL +F A+ + AA+ L L+ SA+S ++++LR D LF + GV P Sbjct: 5 FRQLDLNLLRVFAALMAEGNVTRAAERLALSQSAVSNALRRLRESLGDVLFEKTVSGVRP 64 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 TA A L + +++ A+ +D Q T TIA + ++P + + H Sbjct: 65 TARARELWSAVQPHFDALKQAIS-PDQFDPQEHRGTFTIAMSDYSVERIMPRLAHFMGEH 123 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIID---NMFCTNRTVQHHVLFTDNMVLICREGN 197 P + + P S D + DL I N + V+ H ++ + + R+ + Sbjct: 124 APSMRIELTPFSVADLPAMFDRGGVDLAIGGYLNDSSPSSGVRTHEMWPIHWSCLMRKDH 183 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 PL + A H+ + + R + T A++ S Sbjct: 184 PLAKGPLTLKRFLAARHLDVGFSGMRVPVYDSLLSAHGLQRNLVLTLNAYSPALAIIRES 243 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 D + ++P+ +L L P + + + +++ P + I + F Sbjct: 244 DFIGVLPTTLLDLSIHEKELVSRQ-PPVRMPARPYCVIWHQRWDSHPAHRWLRQTIVSLF 302 >UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=Betaproteobacteria RepID=Q0K3U9_RALEH Length = 311 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 104/296 (35%), Gaps = 6/296 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 R +DLNL+ + + + AA L+L A+S ++ +LR +F DPL +R Sbjct: 1 MSIKEGHFRGVDLNLMVTLTVLLRERSVSRAAARLHLGQPAVSGALARLREMFDDPLLVR 60 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVI 135 G+ PT A+ L + L I AL +D RT + V + P I Sbjct: 61 TAHGMEPTERALELERRLLPALGEIEAALLQRRDFDPLTSDRTFVVGMPDWVELWLAPRI 120 Query: 136 YRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 ++ T P + L P L + + DL I + T + Sbjct: 121 LPSLSTCAPGVRLAIVPTDPFRGTEMLERNEMDLGIGPFAKGAAWRRERAWQTMGFRCVY 180 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 + HVL+ S + R + ++S ++ A+ Sbjct: 181 GAAPLDACQILSLQDYLRFPHVLVSYRGAFDSTADTWLATQGQARDVRYSSARFASVPAI 240 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 + + LA +P+ + + L +LP P + + ++ D L + Sbjct: 241 LKGTAALATVPAVLADQWCATEGLRQLPCP-VPMPDFTVTAVWSAARDNDAGLMWL 295 >UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=A6VSJ2_MARMS Length = 328 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 127/300 (42%), Gaps = 8/300 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR IDLNLL A+ V K + AA+ L+ + AIS ++ LR IF DPL +R+ Sbjct: 20 MNNLRRIDLNLLVTLHALLVEKHVSRAAQRLHKSQPAISHALANLRAIFNDPLLVRRTGK 79 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI 139 + T+ A L +++ L + GAL + +++ R +A + +VLP + + + Sbjct: 80 LELTSRANELLPTLTEALHQL-GALIEQPTFESTQAKRVFRLAMSDYGSRVVLPGLIQIL 138 Query: 140 KTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNM-FCTNRTVQHHVLFTDNMVLICREG 196 ++ P + L+ + + + D+ + + H LF ++ + + Sbjct: 139 RSRAPGIDLQVIQGSRTSMLTGVYDGEIDMAFGVFNSPLSDELHTHTLFIEHFICAADKN 198 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 + ++ + H+L+ + + + + R+I T + + +VAN Sbjct: 199 TLPKTGSLEKTQWLSRPHILVAMQTNESNEIENALHREGVSRRIAMTLPHWGVASHMVAN 258 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +D++ R ++LF PL+ P + FS+ ++ D + + I Sbjct: 259 TDLILTAARRSFDLFLEDSPLQLF-TPPYPIDPFKFSMVWHSRRESDAGHNWLRHTIIEM 317 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 6/293 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +D L F A+Y + AA LN++ S ++KLR F DPLF+R GQ + PT Sbjct: 5 LDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPTPR 64 Query: 89 AMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIKTHY-P 144 A + + L+ L ++ + QR TI T +LP++ A++ Sbjct: 65 ADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQQAAD 124 Query: 145 QLLLRNPPISD-AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 + + + N L + DL I + +V LF + V + E +P + + Sbjct: 125 GITFTIQNLDEQTLNALESGKCDLAIGYLTQLPDSVYQQHLFDQSYVCLAAENHPRIRTQ 184 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAII 263 E H+ + E + +R+ E R+I T + L LVA SDM+A++ Sbjct: 185 LRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGELVAESDMIAVV 244 Query: 264 PSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 P + +R +P P P +I +++ RDP + +I Sbjct: 245 PEQVARHITRRYPCRSWPLP-FPLARIAIRQVWHQRLHRDPGHIWLRSLIAAL 296 >UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUZ7_HALO1 Length = 306 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 119/297 (40%), Gaps = 7/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + ID NLL +A+ + AA + +T SA+S ++ +LR DPL +R G+ + Sbjct: 1 MYIYGIDANLLVSLDALLREASVTRAAHRVGITQSAMSHALGRLRDHLGDPLLVRAGRNM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 TA A L +S +E + + ++ +R + T +++P + R ++ Sbjct: 61 VLTAKAESLAPRVSVLVEEMSRVFAPDEEFEPAALRRGFALRATDHAQFVLMPEVDRLLR 120 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + L +S A L Q Q+DL + + L TD V + R +P Sbjct: 121 AEAPGVDLVVTALSGGAVAPLRQAQSDLTLGTFSDHPSDIHSQALLTDRFVCLVRGDHPA 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 ++ H+ + + + + E+ R+I+ ++L L+A+SD Sbjct: 181 IARGLGVAQYAAMTHIHV--GPAQLGVVDRVLGELGIARRISRVVPHVLVAPLLIADSDA 238 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + + R + L P + S+ +++ DP + D + A Sbjct: 239 VVTMSERLAQRALPGAEVAMLE-PPVPLPPCTLSMAWHERHDADPAHRWLRDAVLRA 294 >UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q081Z6_SHEFN Length = 303 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 141/293 (48%), Gaps = 7/293 (2%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 IDLNL +F+A+Y I AA VLNL+ A+S S+ KLR F D LFIR+G + PT Sbjct: 2 KIDLNLFVVFDAIYCEGNITKAASVLNLSQPAVSHSLGKLRTHFDDALFIRQGNEMRPTP 61 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 A ++ + + + L + L ++ +++ +++ S+ LP++ +++ P Sbjct: 62 VAKNVIDDVREALHQLQVCLVQSRQFEPLTSRKSFSLSLHGSLEPYYLPILQQSLSLESP 121 Query: 145 QLLLRN---PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 + L + ++ EN+L+ DL ID + + + H L D +V++ R+ +P ++ Sbjct: 122 SINLSSNKRVRRTELENKLASGDIDLAIDTLIPVSNNIMHTQLELDQLVVVARKNHPAMN 181 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + D T HVL+ S + + R+I+ + L+ ++ N+DML Sbjct: 182 PDLDLATYLKLDHVLVSSRSTGPSLEDFELSRIGLHRKISLRCQHALSACRVILNNDMLL 241 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +P ++S+ ++ P P + I ++++ ++P + + + Sbjct: 242 TLPKTAAAMYSKMLDIDIHPMP-VELPDIGVHLYWHVNVDKEPANKWLRNKMI 293 >UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHX1_PSEF5 Length = 308 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 125/300 (41%), Gaps = 6/300 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + LRNIDLNLL + +A+ K + A L+L+ AIS S+ KLR + DP+ IR+G Sbjct: 1 MVTVLLRNIDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGLLDDPILIRRG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 + ++ A ++ + + + L I +D QR T+A + ALVLP + Sbjct: 61 SELVLSSLAQNIQQPLREILGQIETLFGKSIDFDPASSQRIFTLAMSDYGAALVLPNLMV 120 Query: 138 AIKTHYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 ++ P L + Q+SQ + DL + + + VLF + + Sbjct: 121 RLRRDAPNTTLVVTQDTRHGMFEQVSQGKIDLALGVFPNLSGDISTEVLFEETFSCLLDR 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 D ++ H+L+ + + +++ R+I + + T +++ Sbjct: 181 RTLPADGTLDLDSYLARPHILVSMDGSANGEVDSLLRDEGLQRRIAVSVPHWRTAPSMIH 240 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 N+D++ + +R + L +L P +++ +P + + ++ Sbjct: 241 NTDLILTVATRTLDEALLNQDLIQLRPPLPIPPFPFV-QIWHQRFDNEPAHVWLREQVKQ 299 >UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=Gammaproteobacteria RepID=A7K354_VIBSE Length = 314 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 6/294 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 RNIDLNLL F +Y ++ + AA+ ++ SA+S S+ +LR++F DPLF RKG + Sbjct: 14 QWRNIDLNLLVTFSYLYRYRSVSVAAEKSYVSQSAMSHSLSRLRLLFDDPLFERKGHKME 73 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKT 141 PT A H+ + L+SI L + ++ + I T + P +Y I+ Sbjct: 74 PTEHAHHIAPTVHHLLDSIAKDLLTKSAFQPENYAGICRIGLTDYAEFIFAPRLYDEIRQ 133 Query: 142 HYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P Q+ N S+ + D+II +M + + L+T+ V +C + Sbjct: 134 RAPEAQISFINVNRSNYVALTEHEKLDVIIGSMPVLDDNFESLYLYTEKHVCMCDKQVLK 193 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + E N L+ P+ + + Q++ E R++ S N LTI L+ D+ Sbjct: 194 GETQLSLEAFANIEQALVSPDGSLKTQVDQKLAEHGLSRKVTVASRNFLTIRHLLKKRDL 253 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +AI+P + L + P + D ++ ++ + + +++ Sbjct: 254 IAIVPEKMALAEGFSDDLITV-NPPIAVADFDIAMLWHSSRNNEDKGIWLRELV 306 >UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR04_HIRBI Length = 302 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 132/302 (43%), Gaps = 11/302 (3%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 +I + +DLNLL +FEAVY + + AA +L+L+PSA+S ++++LR DPLF++ Sbjct: 1 MNKIHSRTDRLDLNLLKVFEAVYREQNLTRAANLLSLSPSAVSHALRRLRAHLNDPLFVK 60 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVI 135 +G+ + PT + + ++ + L G +D ++ TI ++ + P Sbjct: 61 EGRIMRPTPVCARMAPDLLDEIDRLRALLQSWGKFDPAQSKIVFTIGMPDAMEIVFFPEF 120 Query: 136 YRAIKTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 I+ P + + + ++ LS D+ +D T++ ++HH L D+ I Sbjct: 121 VEKIRQLAPNVRIISARYDRNEMVASLSGHTLDICVDIALPTSKQLRHHPLTADDW-CIV 179 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 + + + H+ + +++ R + N L+ A+ Sbjct: 180 SKTHTIQ----TAADYLAQEHIAVSARTVGTVLEDSALEQRGIFRDVRVRCQNYLSALAI 235 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 V SD + +P R + PL+ P + I+ +++++ + D + +++ Sbjct: 236 VERSDRILTMPKRLAQSMIQSRPLKIQDVP-FSMPPIELNLYWHSDNEADSANKWLREIV 294 Query: 314 RN 315 + Sbjct: 295 ID 296 >UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS8_METSB Length = 323 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 131/317 (41%), Gaps = 24/317 (7%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 +R IDLNLL +FEAV H+ ++ A++ L +T SA+S ++ +LR D LFI G Sbjct: 1 MVRIRTIDLNLLRVFEAVMRHRSVIRASRELGVTASAVSHALSRLRQALGDELFISGEAG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIATTPSVGALVLPVIYRAIK 140 + PTA A+ L I GLE I A+ D RT IA T V +LP + + Sbjct: 61 MEPTARALELEPAIRDGLERIDHAVGAQPFVPTDAFRTFRIAATDYVAVAILPQLVGRLA 120 Query: 141 THYPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 PQ+ LR P +D L + + D ++ ++ + + ++ R G+P Sbjct: 121 EVAPQIDLRIFPFNRTDVVRHLDEGRIDFVMGWFGDLPDRMRRATIVVEKEAMVVRTGHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDR-------------------Q 239 L +E + + H+++ + + + R + Sbjct: 181 LTEGPLTKERLFSFPHIVVELIGTEEAAVDGFFDDRGVWRRVWIERLLIEADADQGEVGR 240 Query: 240 INFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKF 299 + + + + +V SDM+A +PS L L P + + +++ Sbjct: 241 VAVSVPHYAAVPPMVRVSDMVATLPSALARAAVEQGSLVMLDLPYEPL-AVPVEMVWHQR 299 Query: 300 SLRDPILHGVIDVIRNA 316 + RD ++ + +A Sbjct: 300 TERDEGSQWLLGELISA 316 >UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=Vibrio mimicus VM573 RepID=D2YJX0_VIBMI Length = 314 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 74/306 (24%), Positives = 143/306 (46%), Gaps = 8/306 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 LR+ DLNLLT+F+AV + AA LN+T +A+SQ++ +LR +PLFIR Sbjct: 8 MDIGLIMLRDYDLNLLTVFDAVMTLGSVNKAADKLNMTSAAVSQNLSRLRDQVGEPLFIR 67 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVI 135 +G+G+ PT +A+++H+++S GL +I L+ +D R I +VLP + Sbjct: 68 QGRGLQPTQYALNMHKHVSAGLSAIRFGLETNACFDPATSTREFVIGGHGYFDLVVLPQL 127 Query: 136 YRAIKTHYPQLLLRNPPISD----AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVL 191 R I P + + P D LS+ + DL + ++ ++ ++ + + +V+ Sbjct: 128 LRKISEVAPHITVNLKPYEDDHFTPSQVLSEREADLFLASLPISHPSIITTQIAEEALVV 187 Query: 192 ICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 + + +P L + + H L + + P R++++ S ++L + Sbjct: 188 VYAKNHPRLGETLTFQQFFDEKHTALTSRRFGHYLFSSLLDQALPARKVHYQSDSMLNLM 247 Query: 252 ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVID 311 A + +D+L P R ++++ L P P + + ++K +D L + + Sbjct: 248 ATASVTDLLCFTPKRLADMWAEKLGLHIQPLP-FEMRPVPTFMCWHKAKQQDKGLIWLRE 306 Query: 312 VIRNAF 317 I F Sbjct: 307 QIEEVF 312 >UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=Q7MFJ9_VIBVY Length = 314 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 125/297 (42%), Gaps = 7/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LR+IDLNLLTI E + +HK I AA+ LN++ A+S+++ +LR F DPL ++ + Sbjct: 7 NLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVNREYR 66 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 TA +L + L +I L ++D TI +++P + + Sbjct: 67 LTAKGEYLRRELESSLNTIRQMLVD-DAFDPLQYAGVFTIGALDFEMMMIVPKLLARFQQ 125 Query: 142 HYPQLLLRNPPISDAENQLSQFQ--TDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P+L L+ P + + DL++ + + V LF DN ++ + + L Sbjct: 126 RAPKLKLQIVPYNAYMPLHDYLEKVADLLLYSTDDSPTNVFKQRLFNDNYAVVMCQNHVL 185 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + E + HV++ + + ++ R++ + + + L+ N+D+ Sbjct: 186 ANQPMTLERYCRSRHVIVSGNGLGKTDIDHELKRRNQQREVVASLPHFSMVPELLINTDL 245 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +A +P R + S + + P ++ +P V I+N Sbjct: 246 IATLPRRLVSHLSHRYEITVAELP-FYTADFQVEQFWHLIHHSNPAHQWVRQEIKNM 301 >UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT25_CHRVO Length = 310 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 116/292 (39%), Gaps = 7/292 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 ++LNLL EA+ + + +A L LT SA+S+ + +LR F DPL +R+GQ T Sbjct: 5 LNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTER 64 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A L + LE + +D +R + A + + +LP I + P Sbjct: 65 AEELRLGLKAVLEQVEQLYQPPQ-FDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPG 123 Query: 146 LLLRNPPISDA-ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE- 203 + L+ P + LS DLI + L D + + + +PL Sbjct: 124 MRLKFIPWQAGRFDLLSDGAADLISTIADEVPDNIYGKSLGQDQPMCVMADNHPLHDKPA 183 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAII 263 +R+ H + + ++ RQI + ++ ++V+ S +L + Sbjct: 184 LERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIVSRSQLLLTL 243 Query: 264 PSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 P F R +P+ P P ++ + + ++ + +DP + + Sbjct: 244 PEHLAVRFQRQFPVRAKPLPFIDY-TYRYWLLWHGRADKDPAHRWFRGHVFD 294 >UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0K340_BURCH Length = 303 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 125/296 (42%), Gaps = 5/296 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +DLNLL +A+ + I AA+ LNL+ SAIS + KLR F D L + G+ + Sbjct: 1 MRFNRLDLNLLVTLDALLDDRRITRAAERLNLSQSAISGMLAKLREYFDDELLVPVGRNL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L + + L + + I+ +++ +R IAT+ V +++ + I+ Sbjct: 61 ELTPLARELVQPVRDLLLQVQTIVAIDPAFEPANARRHFKIATSDYVINVLMHRLIPVIE 120 Query: 141 THYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P L L P DA +L + + D +I LF D+ V + GN + Sbjct: 121 PLAPYLTLELMPQEDAPERLRRGEYDFLIIPEPFKADDHPAIALFDDSYVGVVWNGNRAV 180 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLR-QRVQEMFPDRQINFTSYNILTIAALVANSDM 259 D + HV L + V+ R++ T+ + ++A ++ + M Sbjct: 181 GASIDVARYEQLDHVATLLGWPRLPSYDSRYVEAQGIRRRVRVTTSDFTSMAPVLIGTQM 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A + R +R PL + Q+ + ++++ +DP + + I + Sbjct: 241 IATMHRRLATELTRRMPLRLVEL-EFPIPQMREFLQWHEYREKDPCHRWLREQIIS 295 >UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJC2_9BACT Length = 303 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 124/300 (41%), Gaps = 11/300 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + + DLNL I ++Y + AA+V+ +T A+S ++ +LR F D LF+R G G+ Sbjct: 1 MKISSFDLNLFVIMNSIYTEGSLTKAAEVVGITQPAVSNALSRLREKFDDELFVRTGSGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT ++ + I L+ + +++ ++ +RT I+ +L ++ I Sbjct: 61 VPTQKTENIIQDIQNALQLMQKSVNEPDEFNPKTSERTFRISLGDINEGRILAILMSKIG 120 Query: 141 THYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + + + L+ + +D ++ +F+D V+ R + Sbjct: 121 KSAPHVKIESYYSARDQVPHALATNELSFAVDPFIPNSKDTNSMKVFSDKFVVAHRANHD 180 Query: 199 LLS-LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 + + E + ++ + ++ S + +Q+M ++ + + L +V +S Sbjct: 181 VSKIENLNLEEMLKLKYINISNRKRGASVVEMEMQKMQLQPEMALRAQHYLVTPEIVRSS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 D+ + F++ L + P ++ + ++ D + ++I +F Sbjct: 241 DLCLLC----AETFAKKHGLSYVELP-FKVPALEQYLIWHNSDDNDGSHIWMRNLIAESF 295 >UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter RepID=D0RY94_ACICA Length = 311 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 73/300 (24%), Positives = 126/300 (42%), Gaps = 8/300 (2%) Query: 16 SEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPL 75 +L IDLNL +F +Y K + A++ L L+ A+S ++ +LR F DPL Sbjct: 1 MNEMNNNVASLARIDLNLFRVFVTIYKEKNLTRASEQLFLSQPAVSHALARLRDHFNDPL 60 Query: 76 FIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVL 132 FIR G GV P+ A L I Q L+ + A+ + R +TIA + L Sbjct: 61 FIRDGHGVVPSPLAKRLWPKIEQSLQLMHQAIQSTYDFVPARDLKHLTIAMNDEYEGIFL 120 Query: 133 PVIYRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMV 190 P I + + P L L + I + ++LS + D ID ++ + D V Sbjct: 121 PSIIQHLTQFNPNLQLNSVRIDRKNLRHELSTGKIDFAIDVQHSVEDSIGYECCTKDQFV 180 Query: 191 LICREGNPLLSLE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 +I R+ +PLLS +E +A H+ + + + R I+F T Sbjct: 181 VISRKQHPLLSSTDLTKEIYLDAKHITVSSRPTGRVFEDFFLSKQGIKRTISFRCQQYET 240 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWP-LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHG 308 L+ +D L IP F +P ++ P P ++ ++++++ + + Sbjct: 241 AIRLITQTDHLLTIPQCQIAYFKDNYPQIKVHPLP-IDIAGYQMNLYWDQQKSHEHQIVW 299 >UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=Vibrionaceae RepID=Q5E7C7_VIBF1 Length = 330 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 6/300 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + +DLNLL F + K + AA L + SA+S S+ +LR + DPLF R+G Sbjct: 21 MNEINWKAVDLNLLVAFSTLMETKSVSLAANKLFVGQSAMSHSLSRLRELLHDPLFERQG 80 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 + PTA A+ L+ +++ L++I G + +++ T I T L I+ Sbjct: 81 HQMIPTAKAIQLYPLVNKVLQTISGDILKVDTFEASEFTGTFKIGMTDYAELLFAADIFD 140 Query: 138 AIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 AI P L + + +++ DL+I +M + Q+ L+T+ V + Sbjct: 141 AIHQLAPNAQLCFTTVDKANYQDRFDSEPLDLVIGSMKPELKEFQYQTLYTEKHVCMWDG 200 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 L S + + H L+ P+ +G+ + ++ + R ++ S + LTI L+ Sbjct: 201 QRHLFSSPITLDDYISLPHALVSPDGALKTGVDKELKALGVGRSVSVASKHFLTIRHLMK 260 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 D++ ++P L L P +N + D + + + + + +++ Sbjct: 261 KRDLICVVPELMAQLDLFSEKLVHSE-PPINVGEFDIQLIWQTRNKENKRYQWLKELLIQ 319 >UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=A4XED3_NOVAD Length = 333 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 119/295 (40%), Gaps = 6/295 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +DLNLL +A+ + + AA L L+ SA S ++ +LR F D L + KG+ + Sbjct: 1 MRFGRLDLNLLVALDALLTERSVSLAADRLCLSQSATSSALGRLREYFGDELLVVKGRNM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 TA A L E + LE I + + +D R I I + ++L ++ Sbjct: 61 ILTARAEELIEPVRAVLEQIRTTVAVAPPFDPATTDRVIRIMASDYSTEVLLTDALATME 120 Query: 141 THYPQLLLRNPPISDA-ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + P+ DA + + DL++ + + +LF D+ V++ NP Sbjct: 121 RCAPSMRFEIQPMHDAPIEAIERGYIDLLLTIDYAISSDHPSQILFEDDYVVVGAADNPA 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRV-QEMFPDRQINFTSYNILTIAALVANSD 258 ++ R+ HV + + R++ + + L++ LV + Sbjct: 181 MAEPMTRQLYFELGHVSARFGKARVPAFEDWFVRRQKQQRRVEVVAPSFLSLPGLVVGTR 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +A + R + R PL P + I ++ +N + D L V++ + Sbjct: 241 RIATMHRRMAEIVVRNMPLVIREIP-FDIPPIREALQWNIANNNDRALRWVVEQL 294 >UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ31_AGRRK Length = 296 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 124/291 (42%), Gaps = 7/291 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNL+ F A+Y + + AA LNLT ++S ++ +LR + D LF R G+ PT A Sbjct: 3 DLNLIRAFIAIYETESVSGAAVKLNLTQPSVSHALSRLRDMLDDTLFTRTRDGMKPTFVA 62 Query: 90 MHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQL 146 ++ L I A+ S+D + + +A + LP I + P++ Sbjct: 63 ERMYGIFRSALSEIETAIASRWSFDPKSSNQVFKLAFSDLGEMTFLPHILPRLSQEAPKV 122 Query: 147 LLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + + ++ + + D I N + +F + V + +P + + Sbjct: 123 GIEVVELEVEKLDDWFATGKIDAAIFNSTSAKVQSRSEPIFQERYVCLVSARHPRIRDQV 182 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 E + H+++ + +++ + RQ++ + + +VA +++LA +P Sbjct: 183 SLEQYLSEGHIVVSSH-SGHRQVEDQIRAIGAARQVSLRLPHFTGLHDIVAKTELLATLP 241 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 SR ++F+ ++ P L + + +H+ + + +++++ Sbjct: 242 SRTAHMFASSGMVKYCTIP-LPIPEFEVRLHWRETDGEIEAQAWLREILKS 291 >UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KH33_AERHH Length = 313 Score = 277 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 108/291 (37%), Gaps = 6/291 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +LNLL + + + I AA++L+L+ +IS+ + +LR F D L +R+GQ Sbjct: 1 MHKANLNLLPTLKVLLETRNISRAAELLHLSQPSISKQLGQLRSEFGDELLVREGQRWLL 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A L ++ L ++ + G +D +R +A++ V +LP I A+ Sbjct: 61 TPRAEALAAQLADSLGALERLYEAPG-FDPSRCERVFRLASSDYVAQHILPDICAALARE 119 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P L QL Q + D++ ++ D +V++ +PL Sbjct: 120 APLAALEYSLWDKRLLPQLWQSELDMVSTITELVPDQIRGLHQGEDRLVVLMGSHHPLAG 179 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + H+ + S + Q + R+ ++ +D L Sbjct: 180 RSLSLDDYLAWPHLQVSGGGDKDSPVEQVLAPQGLSRRWFARVPFFQAAVEVLLRTDCLL 239 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 P+ S L P + + +++ +DP ++ Sbjct: 240 TTPAHIAWQLSCEHALHFCDLP-FASRTQQYHLLWHQRHHQDPAHKWFREL 289 >UniRef50_A3YI62 Transcriptional regulator, LysR family protein n=2 Tax=Oceanospirillaceae RepID=A3YI62_9GAMM Length = 305 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 65/302 (21%), Positives = 122/302 (40%), Gaps = 9/302 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + LR DLNLL IFEA+ + AA+ + L+ SA+S ++ +LR DPL ++ G Sbjct: 1 MSVLRQFDLNLLIIFEALISECHVSRAAEKVFLSQSAMSHALNRLRTQLDDPLLVKTENG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAI 139 +TPT A+ + + Q L + + S+ RT IA+T +V P + + Sbjct: 61 LTPTPRALAMLPDVRQALNLVERTISPAESFQASLSDRTFRIASTDYFETVVFPEWFSQL 120 Query: 140 KTHYPQLLLRN--PPISDAENQLSQFQTDLIIDN--MFCTNRTVQHHVLFTDNMVLICRE 195 + P + + A +L + + DLI+ + T+ V + Sbjct: 121 QLSAPNVRVEIDLISEESALLRLEKGEIDLIVGMDKEQKLPSHLIVQDWLTEKQVCLASI 180 Query: 196 GNPLLSLEDDRETIDNAAHVL-LLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 N E H+ E + S + + + R ++ N + A +V Sbjct: 181 QNQNARGSLSLEAYLALPHIRFFDLEGKTDSNVDRWLASQTLARNHIASTTNYMAAARIV 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 AN++ + +P LF++ P+ + P ID ++ + +D + + V+ Sbjct: 241 ANTEAIITLPYHMAKLFTQMMPVSIV-TPPDGLPAIDMTLVQHPLYAKDSGIIWLKQVLC 299 Query: 315 NA 316 Sbjct: 300 EH 301 >UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D3I0_AGRT5 Length = 316 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 121/312 (38%), Gaps = 16/312 (5%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L ++DLNLL + A+ V + A + + L+ A+S +++++R I D LF + Sbjct: 1 MQRFQLGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTS 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 +G T F + + + +E + ++D R I +++P + Sbjct: 61 RGFVMTRFCTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVE 120 Query: 138 AIKTHYPQLLLRNPPISD------------AENQLSQFQTDLIIDNMFCTNRTVQHHVLF 185 +++ +L + + L++ D+ + + LF Sbjct: 121 RVRSEAEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAENFPARYRCASLF 180 Query: 186 TDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSY 245 T+ V I NP + + + HV + + +R+ M +R++ Sbjct: 181 TERRVCIMSANNPAAKEPLTLDALLSLGHVKVTSSPSRRGWIDERLDAMGLERRVVAVVP 240 Query: 246 NILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPI 305 + A+V+ SD++A++P LF R L L P EE+ S+ + RDP Sbjct: 241 HFSAAVAIVSRSDLVAMMPESVAKLFERSHELLLLESP-FEEEKQSTSMIWLAEKERDPA 299 Query: 306 LHGVIDVIRNAF 317 + + I F Sbjct: 300 SLWLREQISACF 311 >UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=Vibrio RepID=A5F3E5_VIBC3 Length = 308 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 143/298 (47%), Gaps = 8/298 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR+ DLNLLT+F++V + AA L +T +A+SQ++ +LR DPLFIR+G+G Sbjct: 1 MIMLRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + PT +A+++H+++++GL +I L+ + +D +R I +VLP + + I Sbjct: 61 LQPTQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKI 120 Query: 140 KTHYPQLLLRNPPISD----AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 P + + D LS+ + DL + + ++ ++ + + +V++ + Sbjct: 121 SDIAPHITVNLKSYEDDHFTPSQVLSEREADLFLAALPISHPSIVTTQVAEEALVVVYAK 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +P L E H L V ++ P R++++ S ++L + A + Sbjct: 181 NHPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESMLNLMATAS 240 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +D+L P R ++++ L+ P P + + ++K +D L + + I Sbjct: 241 VTDLLCFTPKRLADMWAEKLGLQIQPLP-FEIRSVPTFMCWHKAKQQDKGLIWLREQI 297 >UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=Enterobacteriaceae RepID=B4TAI7_SALHS Length = 317 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 218/317 (68%), Positives = 265/317 (83%) Query: 1 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI 60 M NNQ E + + + KPQIF TLRNIDLNLLTIFEAVYVHKGIVNAAK+LNLTPSAI Sbjct: 1 MSDNNQAERQPADQHLQDKPQIFRTLRNIDLNLLTIFEAVYVHKGIVNAAKILNLTPSAI 60 Query: 61 SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT 120 SQSIQKLR IFPDPLFIRKGQGVTPT +A HLHEYISQGLESILGALD+ GSYDKQRTIT Sbjct: 61 SQSIQKLRTIFPDPLFIRKGQGVTPTTYATHLHEYISQGLESILGALDLTGSYDKQRTIT 120 Query: 121 IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ 180 I TTPSVGALV+P+IY+AI+ YPQLLLRN P+ DAE+QLSQFQTDLII+ NR++Q Sbjct: 121 IGTTPSVGALVMPIIYQAIRPRYPQLLLRNIPVDDAESQLSQFQTDLIINTHSYNNRSIQ 180 Query: 181 HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI 240 HHVLF+D + ++CR+ +P L+ E +++A H L+ E Q+ S LRQR+QE FPD+QI Sbjct: 181 HHVLFSDTLEIVCRQHHPCLANAITEERLNSADHTFLMLEGQHLSLLRQRLQETFPDQQI 240 Query: 241 NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS 300 +F+SYNI TIA+L+A+SD+L ++P+RFY+LFSRCWPLE+LP+ +N EQ++FS+HYNK S Sbjct: 241 SFSSYNIFTIASLIASSDLLGLMPTRFYDLFSRCWPLERLPYAPVNSEQVEFSLHYNKLS 300 Query: 301 LRDPILHGVIDVIRNAF 317 LRDP+L VID+IR AF Sbjct: 301 LRDPVLENVIDIIREAF 317 >UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q471I4_RALEJ Length = 323 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 126/296 (42%), Gaps = 8/296 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 + LN L + + + + + AA+VLNLT A+S+++ +LR F DPLF+R G + PT Sbjct: 12 LSLNQLLVLDVLLSERSLTKAARVLNLTQPALSKTLARLRQYFGDPLFVRVGLRMEPTPK 71 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ L + + L+S+ +D QR+ + + + +LP + + P Sbjct: 72 ALELADPVRGILQSVRALRSDHVGFDPRTSQRSFSFFLLDAGASQMLPPLLSRLAEEAPG 131 Query: 146 LLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 +L++ + L DL I + ++++ +L+ + + R+ +P L+ Sbjct: 132 ILVQAVNADATHLDIWLENGLVDLAIGSFPGLTQSIRRQLLWHETYGAVVRKDHPRLAQL 191 Query: 204 DDRETIDNAAHVLLLPEEQNFSG--LRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 D + HVL+ + + ++ P I + T + +SD +A Sbjct: 192 GDLDAFVAEKHVLVSAVGTGHQHLSIERAIEAAVPHTNIICRVPSFATAGLIAKHSDAVA 251 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 ++P + L + P L +D + H++ R+P + ++ F Sbjct: 252 VLPLTLARALCKDLDLTVV-MPPLTLPGMDIAQHWHDRVHREPGNQWIRALVHRLF 306 >UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=Burkholderia RepID=B2JFW9_BURP8 Length = 342 Score = 276 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 111/302 (36%), Gaps = 8/302 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 T ++D+ L+ + + V + + A LN T AIS +++KLR DP+ +R Sbjct: 1 MDEDTAASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGK 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 G+ PT + L + L + G +D +RT IA + +P + Sbjct: 61 SGMVPTEYGESLLAAAQKVLRDVDFVATPHGDFDPARSRRTFRIAAPDYLNDFFMPTVIA 120 Query: 138 AIKTHYPQLLLRNPPISDAEN---QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICR 194 + P L + + L + DL+I N + + LF+D +V + R Sbjct: 121 QFRETAPHARLEIESLGPLFDHTCALDAGELDLVIGNWPKPDLRFERSDLFSDTVVCMMR 180 Query: 195 EGNPLLSLEDDRETIDNAAHVLLL-PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 +PL R+ A H+ + R+I T + + Sbjct: 181 ADHPLAKAPLTRDAYLAAPHLAPAHYSGARGGAIDTGFARARASRRIVATLPYFGLVPQV 240 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + SD++ RF ++ PL + P + +I ++ R + + ++ Sbjct: 241 LLQSDLIFTTTRRFALHYAAMLPLAVVDVP-IPFPRIKCYQMWHPQPDRPSDIAWLRGLM 299 Query: 314 RN 315 Sbjct: 300 AQ 301 >UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUQ0_9GAMM Length = 300 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 128/297 (43%), Gaps = 6/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 LR++DLNL +FEA+ + AA L ++ A S ++++LR+ D LF+R +G+ Sbjct: 4 NLRSVDLNLFPVFEAIMEQGSLNMAACHLGMSQPAASAALKRLRLTIKDELFVRTRRGLE 63 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PTA A+ L+ + LES+ G ++ +D +R +A + + + ++ Sbjct: 64 PTARALELYPVVHHLLESLRGEMERANQFDPLFCERIFKVAGGDYFDMVFMGRLMNMLRE 123 Query: 142 HYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P++ + ++ N + + + DL + + LF ++M ++ +P Sbjct: 124 SAPKVQVESVIHGFQESLNLIQRGKLDLCLHYDKEIAHELPTLKLFEESMSVLMAADHPY 183 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + HV+L N + L + +R + ++ ++ + S + Sbjct: 184 ADKQLSLSDYIALEHVVLPKLSGNANQLDVILGGFNENRCVRARVSSVSSMVMAIKQSYL 243 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + IP+R ++ + L PFP I + + FS +D + ++I + Sbjct: 244 IGTIPTRMASILCEGYDLVFKPFPK-EAPPIPIYLSWAPFSDKDSVHRWFRNMIASL 299 >UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=Burkholderia RepID=A1UYG7_BURMS Length = 439 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 119/304 (39%), Gaps = 7/304 (2%) Query: 17 EGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLF 76 +DLNL + +AVYV GI AA+ L+LT A++ ++ +LR F DPLF Sbjct: 126 RNTKTPMQPDHRLDLNLFRVLDAVYVQGGISAAARALHLTQPAVTHALNRLRAHFGDPLF 185 Query: 77 IRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLP 133 +R+G V PT + + + L+ + A + + + + + ++ LP Sbjct: 186 VRQGNKVVPTERTREVIADVQRHLKGLQDAARAQTRFSPGALDMSFVVGVRDVLESIALP 245 Query: 134 VIYRAIKTHYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVL 191 + + P + L R P++D +L DL I+ + + D +V+ Sbjct: 246 QLVETLAREAPGVRLVSRRVPVADIGRELGSGNLDLAIERRVPAGPRIVAEHVADDTLVV 305 Query: 192 ICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIA 251 R + L R A HV + P + + L + R+I + Sbjct: 306 AMRRDHALAGAPLRRADYFAAGHVTVSPLGEPHT-LDVLLGADGRFRRIQLVCQHYFAAC 364 Query: 252 ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVID 311 +VA+ D+L +P + +R PL P P L + ++++ D Sbjct: 365 QIVASGDLLLTLPRSYALRMTRLLPLAAQPLP-LRLKPYPILAYWHESRELDRAHQWFRQ 423 Query: 312 VIRN 315 + Sbjct: 424 RVIE 427 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 77/318 (24%), Positives = 135/318 (42%), Gaps = 25/318 (7%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 R++DLNLL +F+A+ + AA +L LTPSA+S S+ +LR I D LF+R Sbjct: 1 MTQIHFRSLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGA 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYR 137 +G+ PT A+ L I + L I AL+ S+ + R +IA V A+++P + Sbjct: 61 KGMNPTPKALALAVPIRRALVDIQQALNG-DSFVPEKTDRRFSIACGDYVTAVLMPEVIA 119 Query: 138 AIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + P LR P+ +L + DL + + LF D+MV + R + Sbjct: 120 RFRKAAPLAELRIQPVGAVMKELDAGRIDLAMGGFERIPERLASEPLFADDMVWVMRADS 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFS--------------------GLRQRVQEMFPD 237 P + + E + H+ + + + + L Q +E Sbjct: 180 PFANRQPTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILDQYFEERGLR 239 Query: 238 RQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYN 297 R + T+ N + A+VA D+ A++P F+ + L P S ++ Sbjct: 240 RTVAMTAPNPIVAMAIVAECDLAAMMPRNLAEAFADRYKLALWK-PPHPSALFQISTVWH 298 Query: 298 KFSLRDPILHGVIDVIRN 315 ++ P + + +IR+ Sbjct: 299 RWHGDQPAVDWLRAMIRS 316 >UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=Ralstonia solanacearum RepID=A3RSL5_RALSO Length = 304 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 127/297 (42%), Gaps = 11/297 (3%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 + +DLNLL +F+A+Y + + AAK N+T A+S ++ +LR +F DPLF+ G+ PT Sbjct: 4 KRLDLNLLGVFQAIYQTRNVTLAAKRHNITQPAMSNALARLREVFADPLFVPSPYGMRPT 63 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHY 143 +A L I + L + AL + +D R + T LP + ++ Sbjct: 64 PYAQQLAVPIDRALREVEQALAMSKGFDPASSDREFRMHLTDFAQVAFLPALLERLRALA 123 Query: 144 PQLLLRNPPISD--AENQLSQFQTDLIIDNM-FCTNRTVQHHVLFTDNMVLICREGNPLL 200 P++++R +++ L + + D M + V + LF D ++ R G+PL Sbjct: 124 PRVVIRVEALAEETILPALDEGRLDFAFGRMSKAAGQGVGRYTLFKDRYAVLMRAGHPLA 183 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 R+ A L+ + + +M I + L ++ +V SD++ Sbjct: 184 GHALSRKDFAAAGQALICTSG--HRAIEDVLVKMGA--HIALRLPSFLVVSRIVETSDLM 239 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 I+P+R + P + D S+ +++ DP + ++ F Sbjct: 240 VIVPARLAEQCAATGLFHTAALP-VAMPAFDVSLFWSESRSADPAHAWMRGQLQQLF 295 >UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibrionales RepID=B7VJC4_VIBSL Length = 308 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 124/301 (41%), Gaps = 5/301 (1%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + IDLNLL +A+Y + AA+ ++ SA+S S+Q+LR +F DPLF R G Sbjct: 1 MADFNWKGIDLNLLIALQALYKTNSVSKAAERCYVSQSAMSHSLQRLRKLFDDPLFERVG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 + T A+ L + L +I + + S+D + T I T + P ++ Sbjct: 61 SKMEATDRAIELSSTVEALLNTIQSEVLLSKSFDAATYKGTWKIGLTDYAEQMFAPALFD 120 Query: 138 AIKTHYPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 IK P ++L N S+ + + D+ I + ++ + L+T+ V + + Sbjct: 121 LIKQSSPNSQVVLFNVNRSNYQQVFEDAKLDMAIGSFGEVSKQYRTTHLYTEQHVCLFDK 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 + E H L+ P +G+ +R+ E+ R++ S N LT+ L+ Sbjct: 181 SVVSIEGPISLEQFVAVEHALVSPAGSLKTGVDKRLAELGFSRKVAICSSNFLTVKRLIR 240 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++L I+P + P ++ D + Y K D + + Sbjct: 241 GRELLCIVPKLVARNDIQDQDTVVAVEPPIDVPDFDIQLIYRKTKHLDDKNKLLRKLFTQ 300 Query: 316 A 316 A Sbjct: 301 A 301 >UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM2_9RHOB Length = 313 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 122/303 (40%), Gaps = 11/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 L DLNLL + +A+ + AA + L+ A+S ++ +LR D LF+R+GQG+ Sbjct: 1 MNLAGFDLNLLKVLDALLRERSTTRAAARVGLSQPAVSAALGRLRAALGDELFLRRGQGL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T FA L + + L+ + L +D +RT +A +++P + + Sbjct: 61 VATDFARALEAPLRETLDRLEDLLAAPQEFDPATAKRTFRLAGIDFFAEMLMPQLAARLA 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + ++ + + E L +++ D+ + + + +H +LF VL GNP Sbjct: 121 AAAPGVRIQLLNLVPREYEATLERYEADVALFPLTGSPEWAEHRLLFRSPFVLAAAAGNP 180 Query: 199 LL-----SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 L + + H+L + + + + R++ + + I Sbjct: 181 RLAHLAEGDTVPLDLFCDLGHILFSLDGNLRAMGDDALAAVGRQRRVVMSMASFPGILRA 240 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 VA S+ ++++P + L P E + + +++ S P + + I Sbjct: 241 VAGSEAVSLVPVQLARKLQGEMGLRCFALPMPLEPPV-IGMMWHRRSSATPAHAWLREQI 299 Query: 314 RNA 316 Sbjct: 300 VEL 302 >UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6V8B0_PSEA7 Length = 310 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 9/304 (2%) Query: 18 GKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFI 77 +P + L +DLNL +FE VY + + AA +L+L+ SA+S ++ +LR DPLF+ Sbjct: 2 NQPHEWPPLSRLDLNLFRVFEVVYRERNLTRAAALLHLSQSAVSHALARLREQLGDPLFV 61 Query: 78 RKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPV 134 R+G+GV PT A L I L + ++ S+D + RT + + LVLP Sbjct: 62 RQGRGVAPTPLAERLAPGIRDALAGLQRSVARCQSFDPRHDARTFLLNMPEQLEPLVLPD 121 Query: 135 IYRAIKTHYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLI 192 ++ PQ+ +R ++ + +L + D ++ T+ ++ L D + ++ Sbjct: 122 FLGHLRQVAPQVEVRCSSLHWAELKTELEAGRIDAAVEVARPTDAALRRQPLLEDRLWVM 181 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 P + E E AAHV + + + ++ R++ + L+ A Sbjct: 182 AG---PEFAGELSAERYLAAAHVAVTSRRRGICIEDLALGQLGLTRKVRQRCQHYLSAAL 238 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 LVA L + R+ L +R LP P L + ++++++ + +P + Sbjct: 239 LVAQGGYLLTLTRRYAELLNRGLGNRLLPMP-LALPAVALNLYWSRQADAEPGGRWLRGE 297 Query: 313 IRNA 316 + Sbjct: 298 LMEL 301 >UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC13_VIBFU Length = 310 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 62/303 (20%), Positives = 120/303 (39%), Gaps = 10/303 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 NIDLNL+ +F VY + + A LN++ SA S S+ +LR D LFIR Sbjct: 1 MKKFDNIDLNLMKVFYYVYETQSVQMTADRLNISQSACSHSLARLRSRLNDELFIRINGK 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + PT A L + I LE + L+ +D Q I+ V+P + + Sbjct: 61 MIPTNQAEQLAQSIQPALELLYSGLNTATPFDPAVGQHHFVISGYDFSAWCVMPTLTAYL 120 Query: 140 KTHYPQLLLRNPPISD--AENQLSQFQTD--LIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 H+P + +R L + D L D+ + + + + + + Sbjct: 121 AEHFPNITVRLVQSDKQIPTEHLESGEIDLSLGFDHEAEQSNHIGNAIWQSGQYCIAMDN 180 Query: 196 GN--PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 + + D +T HVL+ P + + + ++ RQ+ T ++L+ L Sbjct: 181 QHDALMAGRPLDLDTFLAYPHVLVTPWNEPRGIVDATLGKLNKKRQVAVTLPSVLSAPFL 240 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + ++ P + + L + P + Q ++++K +DP ++ +I + Sbjct: 241 LKGTNYFLAAPESYLETLADTLQLAFVA-PPIPIPQYHIKLYWHKVREKDPKVNWLIHRL 299 Query: 314 RNA 316 + Sbjct: 300 CDL 302 >UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=Vibrio RepID=A6ARN3_VIBHA Length = 305 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 6/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 RNIDLNLL F +Y ++ + AA+ ++ SA+S S+ +LRV+F DPLF RKG + Sbjct: 6 QWRNIDLNLLVTFSYLYRYRSVSLAAEKSFVSQSAMSHSLSRLRVLFDDPLFERKGHKMA 65 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKT 141 PT A ++ + L+SI L + ++ + I T + P++Y I+ Sbjct: 66 PTEHAHYIAPTVHHLLDSIAKDLLTKSAFLPENYAGVCRIGLTDYAEFIFAPLLYDEIRK 125 Query: 142 HYP--QLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P Q+ N S+ + D+II +M + + L+T+ V +C + Sbjct: 126 RAPEAQISFINVNRSNYVAITEHDKLDVIIGSMPVLDDNFESQYLYTEKHVCLCDKRVLK 185 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + N L+ P+ + + +++ E R++ S N LTI L+ ++ Sbjct: 186 GETQLSIHAFANIEQALVSPDGSLSTQVDKKLAEHGLSRKVTVASRNFLTIRNLLKQREL 245 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +AI+P + L + P + D ++ ++ + + ++ Sbjct: 246 VAIVPEKMAQAEGFSDDLVSVQ-PPIAVADFDIAMLWHTSRNNEDKGIWLRQLVAEL 301 >UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAE8_9RHOB Length = 307 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 114/302 (37%), Gaps = 8/302 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 LR +DLNLL I E + + + AA L+++ A+S+++Q+LR + DPL +R Sbjct: 1 MRQVNLRGVDLNLLVILEKLLETRHVSLAATQLHMSQPAVSRALQRLRDLLNDPLLVRIA 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 T A + + L +I + +D Q TI + L P + + Sbjct: 61 GDYELTERAAEIQRLLPSVLATIQDVIAKPE-FDPATAQETIRFSGPELEVNLYGPPLLK 119 Query: 138 AIKTHYPQLLLRN-PPISDAENQLSQFQTDLIIDNMFCTNR--TVQHHVLFTDNMVLICR 194 +K P + L I + L + ++ + + L + V + Sbjct: 120 RMKQEAPGMKLELKSNIRNQFEPLENGEAHFVLSGQEPSAATSQLHRISLGRFSYVCLMS 179 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 + +PL H+ ++ S + +++ M R + + Sbjct: 180 KDHPLAGKPISLNDYLAQDHISVMITGSGQSIIDEKLAAMGRKRNVAVKIGSFFAAMHFC 239 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQI-DFSIHYNKFSLRDPILHGVIDVI 313 +D+L ++PS F P P ++ +F +++++ DP++ ++ Sbjct: 240 GQTDLLFLVPSIFDKKIYEGHNTIASPVPDFLKDHHQEFFLYWHECYHHDPMIQWTRTLM 299 Query: 314 RN 315 + Sbjct: 300 KE 301 >UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K8D7_AZOSB Length = 298 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 130/299 (43%), Gaps = 11/299 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 ++++DLNLL IFEAVY+ + + AA L LT ++S + +LR++F DPLF+R GV Sbjct: 1 MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGV 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIK 140 PT A + + Q L + LD ++ RT + + + LP + RA+ Sbjct: 61 EPTVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALL 120 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + + + L Q DL I + ++ + L D +I + Sbjct: 121 ERAPGVRIETRQLGGVELAAALDSGQIDLAIGYLPVLDQGFECRHLLADEYAVIA-PRHL 179 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + S + + + Q + ++E ++ + + + A++A + Sbjct: 180 IPSGGKGDNAFNGLDFIAVTSHPQTLAI----LRECGLLDRVKLWVPHFMVVPAILAERN 235 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 A+ P + FS + P P+L +D ++++N+ DP + +++ + F Sbjct: 236 FAAVAPREVVHAFSPRSRVRSFPLPALQ-RGMDVNLYWNRRYTGDPGHAWMRELVADLF 293 >UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RWU1_ALTMD Length = 347 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 116/283 (40%), Gaps = 5/283 (1%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY 95 IF+A+ I AA L++T A+S ++ ++R + D LF++ G+G+ PT+FA +L Sbjct: 2 IFDAIMTEGAITRAADRLSMTQPAVSNALSRMRTAWNDELFVKDGRGIQPTSFAKNLWSQ 61 Query: 96 ISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPI 153 I L + A++ +RT IA T ++ ++V + + I+ P + + P Sbjct: 62 IQGPLGELEVAVNPTDFNPASAKRTFRIAATDNIVSMVWGPLRKVIENEAPGINIHAIPN 121 Query: 154 SDAENQ--LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDN 211 D E L + +L ++ + + V++ R +PL + E Sbjct: 122 YDMETDKILKDAEAELTFSKYQEPGSVIRAEHVLDPSWVVVMRPDHPLAKSQLSLEDFVA 181 Query: 212 AAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLF 271 A H+L+ Q + + R++ + L+ S+++ + PS Sbjct: 182 ADHLLVSVTGDVSGPTDQVLANLGLRRRVAMSVNQFHNATPLLKESNLICVAPSLVMEKE 241 Query: 272 SRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 L P + S+ ++K +D L + ++ Sbjct: 242 IFSGELAVFETP-IEIVSSPLSVMWHKRQDQDAGLQWLRGLVV 283 >UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHJ0_HAHCH Length = 291 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 121/297 (40%), Gaps = 15/297 (5%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR +DLNLL I +A+ + + AAK L+L+ A S ++++ R +F DPL IR + Sbjct: 1 MNLRGVDLNLLVILDALLDERHVTRAAKRLHLSQPATSSALERCRHLFGDPLLIRGRGEM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGS--YDKQRTITIATTPSVGALVLPVIYRAIKT 141 +A A L E I L ++ + + ++TI I + +L +++ + T Sbjct: 61 RLSAKAESLREPIKALLTQAERVINQADTPLAELRQTIRILMADFPVSALLGPLHQRLIT 120 Query: 142 HYPQLLLRNPPIS---DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P L L P A QL++ + DL + + + L ++ ++ R+ +P Sbjct: 121 SAPNLDLIVQPWHGAKSALEQLAKGEADLAVSVFPNVGASFRCVELLYEDYCVLMRKDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + HVL+ S + Q +Q R++ D Sbjct: 181 AAQN-FNLQQWLAYPHVLVSGRGDADSPVDQTLQARGLRRRVGLVVPYFQMAP------D 233 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++A++P+ P P + E + ++ D + V++VIR Sbjct: 234 LIALLPTHCVPQ--DTTKFTVFP-PPIPVEGFPLHLAWHVRKHGDQAVSHVVEVIRE 287 >UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9F6_RHIL3 Length = 317 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 118/301 (39%), Gaps = 8/301 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 +L IDLNLL F+ + + + AA L T SAIS S+ +LR +F D LF R+ Sbjct: 1 MAEFSLNQIDLNLLRTFDVLMRERSVTRAADRLGRTQSAISHSLGRLRDVFKDDLFTREA 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYR 137 + PTA A L E ISQ L I A+D ++D R I + LP + Sbjct: 61 GIMEPTARAKELAEVISQALHEIRVAVDRHLNFDPTTTSRNFRIGLSDYTAVTYLPELIE 120 Query: 138 AIKTHYPQLLLRNPPISDAENQ--LSQFQTDLIIDNMFCTNRT-VQHHVLFTDNMVLICR 194 P L + + L + + + + + L D MV Sbjct: 121 NFSMLAPNASLNVVHAREPDALGSLKNREVECAVLGNPKLDAEHFEVVELSRDRMVCAGW 180 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 GNP ++ + + H+ + + +Q++ R++ T + L ++ Sbjct: 181 TGNPAMAD-MSLDRYLASPHLQISADGIAAGVADITLQKLGLHRKVVATIPHYLVAPWVI 239 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +++++ S +P P L + S+ +++ + DP ++I+ Sbjct: 240 KGTELISAFGDGVLLALSEESETAIVP-PPLELPDVTISLIFDRSNELDPGHVWFRNLIK 298 Query: 315 N 315 + Sbjct: 299 D 299 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 132/297 (44%), Gaps = 9/297 (3%) Query: 24 TTL--RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 + IDLNL I AVY I A K L+L+ A+S ++ +LR + DPLF+R G+ Sbjct: 1 MNMLHSKIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHGR 60 Query: 82 GVTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRA 138 + T + + + + L G +D QR + + ++ P + Sbjct: 61 KMIATQLCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGFRDILESIFFPELATD 120 Query: 139 IKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 + + P + + + +S D E L D++ID + T+ + H ++ ++ LICR+G Sbjct: 121 LMANTPNITVHSRQVSRLDMEAALESQALDIVIDVLTPTSNDIHHTLICDEHFSLICRKG 180 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +P+LS A H L+ ++ + + + + R+ + ++++ Sbjct: 181 HPILSD-MSLANYIKAEHALVTFKDSAVNTVDMALAKHAVARKFALKCEHYFAATSVISR 239 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 DML +P+ + L + P+E +P P + ++++K + DP+ + + Sbjct: 240 CDMLLTMPNAYARLLKQQMPVEVVPLP-FEVPILPVHMYWHKQAEHDPLNSWMRQKL 295 >UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria RepID=NODD1_RHISN Length = 322 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 114/296 (38%), Gaps = 4/296 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL +A+ + + AA+ +NL+ A+S +I +LR F D LF G+ + Sbjct: 1 MRFKGLDLNLLVALDALMTERKLTAAARSINLSQPAMSAAITRLRTYFRDELFTMNGREL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A L + + L I ++ ++ R+ I + + + L + + Sbjct: 61 VPTPRAEALAPAVREALLHIHLSIISWDPFNPAQSDRSFRIILSDFMTLMFLERVVVRVA 120 Query: 141 THYPQLLLRNPPISD-AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + P SD + L + D +I + T LF + V + N Sbjct: 121 REAPAVSFELLPFSDEPDELLRRGDVDFLILPEMFMSHTHPRAKLFDERFVCVSCPTNQK 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 L + + + HV +Q S ++E R++ I + ++ +D Sbjct: 181 LPPQLSIDNYVSMGHVAAQFGKQRPSVEEWLLREHGLRRRVEVAVPGFTMIPSFLSGTDR 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A +P R F++ PL P ++ + DP + ++ Sbjct: 241 IATLPLRLAMHFAKAIPLRITELPQPIFPAFTEAVQWPAPHSSDPASLWMREIFLQ 296 >UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3VWI6_9RHOB Length = 314 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 126/298 (42%), Gaps = 8/298 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 R DLNLL IF V + + + AA LN+T ++S +IQ+LR + D LFI+ G Sbjct: 1 MINRRYTDLNLLRIFHVVMLERNMTRAAARLNMTQPSVSNAIQRLREVLADDLFIKVSGG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 V PTA A + I ++S++ +D ++ + IA + V ++ + + Sbjct: 61 VVPTAKAEAIWPTIRNSIQSLIQTID-PERFEPSVATDSFRIAMSDFVATQLILPVAGPL 119 Query: 140 KTHYPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 P + L + + L Q D+ + ++ +L T V R+ + Sbjct: 120 FNAAPHVSLVLCQNSVDNIVPGLIDGQFDMAAGVIPYKEARIRSILLKTLTYVCAMRKDH 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 PL A H+ + ++ + + + + R I T + +++++ Sbjct: 180 PLAKEPLTFADFMAARHLQVSLSGRS-GFIDRYLTDRGMFRDIALTIRHYTLAPEILSST 238 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 D++AI+PS + S + L K P + + S+ +++ + P + + + + Sbjct: 239 DLIAILPSEVISH-SHQYDLLKTTAPPIPVYEDSISLLWHERNDAMPAHRWMRERLID 295 >UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=Burkholderia RepID=A1UYR8_BURMS Length = 313 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 118/297 (39%), Gaps = 7/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR+IDLNLL I +A+ + + A + + LT A+S ++ +LR +F D + +R G+ Sbjct: 1 MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIK 140 T A L I Q L+ I E +D R T+ + L+ P + R I+ Sbjct: 61 ELTPRAKALACPIRQILQQIEELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIR 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + + L + D+ + + VLF D +V + +P Sbjct: 121 GTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDHPDAISSQVLFQDRLVCVLSRRHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E + + + S + + +M R+I F + L + +++ Sbjct: 181 DANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWLVVPSMLDALP 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + I+ R L P L+ E + +++++++ + + I + Sbjct: 241 LAVIMSERHALSLGDS-RLAIRELP-LDLEPVTWTLYWHRRYDNSVAHEWLRNCITD 295 >UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMY5_VEREI Length = 304 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 20/304 (6%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR IDLNLL F+A+ + + AA+ L L+ SA+S ++++LR F D L +R +G+ Sbjct: 1 MGLRQIDLNLLVTFQALVEERNVSRAAERLALSQSAVSHALKRLRNTFQDELLVRGPRGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 PT A+ L + GL +I A+D + S+D T ++ T V ++ + ++ Sbjct: 61 EPTPRAVTLAIAVKSGLATIETAVDEKRSFDPATCHSTYYLSVTEYVRPFIMAHMCAYVR 120 Query: 141 THYPQLLLRNPPISD-------AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 P + L + A L DL N ++ LF D + Sbjct: 121 EAAPHVRLVFESPDEHQVGSAVAYEGLQIRLADL------PVNGPMESMRLFDDTFAVAM 174 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 R +P E E AH+ + S + + + R + N L + Sbjct: 175 RREHPFAEQELTLEKYLQLAHIKVT--GVGSSAIDRALTARSLVRDVVVKMPNWLEALEV 232 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 V +D++ +P+ + L P P Q+ ++ + DP + + + Sbjct: 233 VECTDLVVAMPNHWTRLGRLPRCCITRPLPLAL--QMPIDAAWHPRNSSDPAHVWLRETV 290 Query: 314 RNAF 317 R AF Sbjct: 291 RQAF 294 >UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3H6_9ENTR Length = 303 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 123/302 (40%), Gaps = 14/302 (4%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + IDL L +F+A+ + + AA + LT A+S + KLR F D LF+R QG Sbjct: 1 MNGITRIDLKQLRVFKALLKERNVTRAAAQMGLTQQAVSAQLSKLRDTFQDHLFLRSAQG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI 139 + PT A L ++ ESI AL +D T I+ T A++LP + + Sbjct: 61 LIPTPLAEQLEPRVNTVFESI-AALSPPDRFDPAEVYTTFVISATDYAVAVILPRLMAKV 119 Query: 140 KTHYPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 +T P L L L+ DL + Q LF+++ + + R + Sbjct: 120 RTQAPGLKLIIRDFESDRLYPLLTSGDLDLALTFPAFVPDGCQTKWLFSEHHICVTRSDS 179 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNF-SGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 P+ + + I + +++ P N R I + + A +A+ Sbjct: 180 PMQNQQFTISDIADLPQIIVSPTRANLIGSADDWFASKGYSRNIVMSVPSFAAAPACIAS 239 Query: 257 SDMLAIIPSRFY-NLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +D +A +PSR N R L+ P D ++ S +DP+ ++ +++ Sbjct: 240 TDCIAFLPSRILPNPLVRPIQLDDSP------PSFDVIAAWHLRSNQDPLHKWILSLLQQ 293 Query: 316 AF 317 F Sbjct: 294 EF 295 >UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383CFA Length = 329 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 115/298 (38%), Gaps = 10/298 (3%) Query: 27 RNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPT 86 +D+ + + + AA+ L +S ++++LR + DPL +R G + PT Sbjct: 7 ATLDVRAMRTLLVLLTECNVSRAAERLGQAQPTVSLALKRLREMLGDPLLVRYGGSLVPT 66 Query: 87 AFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHY 143 + L + L I L ++D RT +A +G++ LP + R I+ Sbjct: 67 ERGLDLKVSLEAILSEIDARLTPHPTFDPAHSDRTFRLAANNCLGSVFLPPLVRTIRRAA 126 Query: 144 PQLLLRN---PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + + PP+ D Q+++ D +I N ++ L + ++V + R + L Sbjct: 127 PGVTVEVGQTPPMEDLLRQMAEGAIDAVIGNWPQPPSHLRISTLLSTDIVCVMRPNHRLA 186 Query: 201 S--LEDDRETIDNAAHVLL-LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 D H+ S + R+ E+ R+I T + ++A S Sbjct: 187 RREGRIDLADFLAEGHLSPTSDRNAQLSPIDGRLIELGLKRRIAVTVPEYAMVPYMLAQS 246 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 D+L F ++ + + P ++ F + ++ P + IR+ Sbjct: 247 DLLFTTGRHFAEQIAQSFAFSLVDAPE-ELGRMSFYMLWHDCKHHSPAHAWLRRTIRS 303 >UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P5Q9_9ENTR Length = 305 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 123/299 (41%), Gaps = 9/299 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR +DLN L + + + AA+ L + A+S ++ +LR +F DPL +R+ Sbjct: 1 MNNLRKLDLNQLVTLSVLLRERHVSRAAEALYKSQPAVSHALNQLRELFQDPLLVRRDGQ 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAIK 140 T+ A L +++ L + + QR IA + AL+ + ++ Sbjct: 61 YQLTSKAESLCIPLNEALNQLDDLIAQKQFNPLSCQRHFNIAMSDYGAALIAVKLVPYLR 120 Query: 141 THYPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + P + L+ + +N+L + DL + ++++ ++FTD V I Sbjct: 121 KYAPDIDLKIWHCSREEMQNKLHEGSLDLAFGVFNTLDYSLRNQIVFTDKFVSIVDPQ-V 179 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + D + H+L+ + + + + ++Q + R+I T L+ ++ Sbjct: 180 CSQGKMDLIDWVSYPHILVSMKPFDANEIDHQLQLINQQRRIAVTVPYWQIAPQLLMGTN 239 Query: 259 MLAIIPSRFYNL-FSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 ++ + + L S + L P L + F + +++ S D ++ + + I Sbjct: 240 LILTLAQKAIPLSMSDKFTLFT---PPLPLPDLVFQMIWHQRSDTDKAVYWLRETIVEL 295 >UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobacteria RepID=Q7MC61_VIBVY Length = 313 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 132/295 (44%), Gaps = 8/295 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL F+ V + + AA+ L +T A+S ++ +LR + DPLFIR+G+G+TPT F Sbjct: 15 MDLNLLKTFDVVMKTRSVNEAAETLGITAPAVSHALNRLRDQYQDPLFIRQGRGITPTNF 74 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ LH I + L +L ++ RT +++ + ++LP + + H P Sbjct: 75 AIELHAEIQEPLSLLLNGAKSRQQFNPDTSHRTFRLSSHKDIDLMLLPPLMDHLAQHAPN 134 Query: 146 LLL----RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 + L + D + L + D+I+ + + +LF +V++CR+ +P + Sbjct: 135 VKLCADVEHLDERDRQADLRTRKVDMILATVPFDEHGYHNELLFELPLVMVCRQDHPRIQ 194 Query: 202 LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLA 261 + H+L + QN + E P R I + + + + A +D + Sbjct: 195 NTITHQQFFAEQHLLWETKRQNQDIVDSLALEPQPQRNIAYKTGSSCNAIMMAAQTDWIC 254 Query: 262 IIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + +L ++ L+ +P P ++ + ++ +D + + A Sbjct: 255 VTGQWHADLMAKAHQLQVMPLP-FKLNKLPIYMTWHHSQQQDSGHQWLKSALMQA 308 >UniRef50_A1R1P0 Putative transcriptional regulator, LysR family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1P0_ARTAT Length = 314 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 63/302 (20%), Positives = 122/302 (40%), Gaps = 8/302 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 K T LR IDLNLL +F + + + AA L++T A+S ++ +LR++F DPLF + Sbjct: 2 KAINETNLRKIDLNLLVVFHVLMQERHVTRAAAKLHITQGAVSAALGRLRLLFDDPLFQK 61 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVI 135 G+ PTA A+ L I Q L+++ + + ++ RT IA + + A+ +P I Sbjct: 62 SRTGMVPTAKALALAPRIGQSLKTVSDLVFQDEQFEPTTSNRTFHIAMSDDLEAVFVPKI 121 Query: 136 YRAIKTHYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMFC-TNRTVQHHVLFTDNMVLI 192 + + L + DL++ H VLF + + Sbjct: 122 VTEAIRSNWNVKFSFHQTNSVLWQEALDDPRMDLVMCATPPQVPAAYHHSVLFASSYTCL 181 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 LS E + H+ + + + + ++ +R+ + + A Sbjct: 182 YDGQRMKLSEPLSLEDYAGSGHLRVSY-DAQRGFVDEILESQGYERKAVASISHFAGAVA 240 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 ++ +D++A IP+ FS L P + + S+ + P + + Sbjct: 241 VLRAADLIATIPTYTAKAFSDAAGLTMSQ-PPVPMPRFTISLIWEVPKETQPEHVWLRKM 299 Query: 313 IR 314 ++ Sbjct: 300 MQ 301 >UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7M9_BURCJ Length = 299 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 116/297 (39%), Gaps = 11/297 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRK--GQGV 83 ++ D+ LL + + + AA+ L ++ A+S + +LR + DPL + G+G+ Sbjct: 1 MKKHDMGLLVSLDVLLEEANVTRAARRLAISQPALSAQLARLRQVLDDPLLVPAERGRGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L + + L + ++ ++D +R TIA + + + I+ Sbjct: 61 RLTPRAAQLKSPLHELLTRLEDLVEAPYAFDPSTAKRDFTIALNDNAAMTIGLDLIECIR 120 Query: 141 TH-YPQLLLRN--PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 Y + L P + + ++ + DL+I ++ H L D + R+G+ Sbjct: 121 KQSYAGIRLAMLQIPRDEVLDLAARGRIDLVIGTRAFMPPGLRTHDLVYDRFQVAQRKGH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P + E HVL+ SG+ + E+ R + + ++ + Sbjct: 181 PRGTAAMTLEQYCAYEHVLVSTNGSYHSGIDDFLAELGHYRHTTVSVQYYTAVPPILERT 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + LA +P RF + F +++ P + + ++ D + + + Sbjct: 241 NCLATLPERFLHRFDHM--IDRFDLP-FAFDPFQLQVGWHPRFDEDLGHQWLREQLI 294 >UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B54141 Length = 298 Score = 272 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 5/292 (1%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL + +A+ + AA+ L +P+A+S+++ +LR DPL +R GQG+ PT Sbjct: 1 MDLNLLRVLDALLQENSVTRAAERLGTSPAAVSRTLARLRRTVGDPLLVRAGQGLVPTPR 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ L E + + L +D QRT T+ T + + + I PQ Sbjct: 61 AVELREEVGALIRGCDNVLRPGAGFDAVHLQRTFTVQATDLLLVGLAGSLTERIHAEAPQ 120 Query: 146 LLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + + P + + L Q D+ + + + ++ L +V I R G+PL Sbjct: 121 VDVVFLPEAVEGGPGLRQGLVDVELGVLGHLDPEIRTRRLTRMPLVGIARTGHPLFDGRI 180 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 D A H+ + + + + E+ R+ + + L ++D++A+ Sbjct: 181 DARRFAAADHIGISRLGKRLGPIDSALAELGLRRRTAVVVPSHTSAMMLARDTDLVALSL 240 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + + L P P L+ E +D + ++ + DP + + A Sbjct: 241 ADWIPDTIAAMGLRAFPVP-LDLEPLDLGMAWHPRNSADPGHRWFREHLAAA 291 >UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZVD7_RHILW Length = 321 Score = 272 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 103/302 (34%), Gaps = 6/302 (1%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 TLR IDLNLL F + + + AA L L +S ++++LR D LF+R Sbjct: 1 MMMNDATLRKIDLNLLLAFSVLMQERNVSRAADRLLLGQPGLSAALRRLRETLDDELFVR 60 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVI 135 G+G+ PT A+ + I L I A+ + +D Q I ++ + + Sbjct: 61 VGRGLQPTPRALSIAPAIEDALSGIERAIRPQADFDPASWQGEFRIGMCDNLESAFFGPL 120 Query: 136 YRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 + P L DA +L + D + LF + I Sbjct: 121 VARLLQLSPGARLIGIASEKRDAARRLDEGVFDFSVSVHDEPASWHIRAPLFNQASICIY 180 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 E L E N AHV + E + + + R++ T + Sbjct: 181 DEAQLKLKAPLSLEDFANVAHVTVSFEGNASTSIDTALSRTGHVRRVVATVPRFSALPTA 240 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + ++++P ++ L P L+ ++ Y + D + Sbjct: 241 LRAMPAISVVPESIGRCMAQLHGLTICA-PPLSLPADPVTMLYRRVDQADGRARWFRRLF 299 Query: 314 RN 315 + Sbjct: 300 LD 301 >UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KZI9_FRASN Length = 310 Score = 272 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 118/299 (39%), Gaps = 5/299 (1%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + ++DLNLL +A+ + + AA+ L LT SA+S+++ +LR DP+ +R G Sbjct: 2 HAMQSTSSLDLNLLVALDALLEERSVNAAARRLRLTESAVSRALGRLRRAMDDPVLVRAG 61 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDI---EGSYDKQRTITIATTPSVGALVLPVIYR 137 + PT A+ + + +E RT TI + ++ + + Sbjct: 62 HRMVPTPRALAVQAEVHALVERAHAVFTPIREPDLATLARTFTILASDALTTAIGVDLLD 121 Query: 138 AIKTHYPQLLLRNPPISDAENQ-LSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 + P + +R P A + L DL I ++ T+ + VL + + + R G Sbjct: 122 RLTRDAPGVRVRFLPEPSATDDPLRDGTADLEIGDIDSTSPEIHIEVLGEEQALAVVRAG 181 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 +PL E + A HV + L + + R + + + LVA Sbjct: 182 HPLTRGRLTPERLAAARHVTASRRGRFAGPLDEVLAARGLRRTVAVSVPSHSAALLLVAG 241 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 SD++ ++P+R L L L+ + + ++ D + +R+ Sbjct: 242 SDLVGLVPARLGRGLLDSLGLVALDL-GLDLPTLTIAQAWHPRYEADAPHRWLRGHVRD 299 >UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=Idiomarina loihiensis RepID=Q5QVJ9_IDILO Length = 331 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 65/302 (21%), Positives = 122/302 (40%), Gaps = 10/302 (3%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 LR++DLNLL I A+ + + AA+ L L+ A S ++ + R IF DPL R Sbjct: 25 IDMVNLRSLDLNLLVILHALLEEQHVTRAARRLALSQPATSNALDRCRHIFDDPLLERVA 84 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSY--DKQRTITIATTPSVGALVLPVIYRA 138 + TA A L E +SQ L +I ++I ++T+ + G +V+ + Sbjct: 85 GEMRLTAKAQSLKEPLSQALLAITAIVEIPKVELTQVRQTVRLIMADQPGLIVMTHLLTK 144 Query: 139 IKTHYPQLLLRNPPIS---DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 + T P++ L P DA ++L + D+ I + ++ V+ R Sbjct: 145 LSTSAPKVNLSLLPWRSSKDALHRLENGEADIAISTFPALPPKFYRQQIAYESYVVAMRA 204 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +P + + H+++ E + + + + R + N I L+ Sbjct: 205 SHPAAQK-FNADEWLAWPHIVVSGEGNARGSVEEVLAQQGKVRHVGAVVPNFTMIDPLIK 263 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +DM+A P N S L P + + ++ D ++ VI+ +++ Sbjct: 264 ATDMIATTPM---NCLSDPQGLAIFE-PPIAVPGFSLHLAWHARRDSDLVVKHVIETLQH 319 Query: 316 AF 317 F Sbjct: 320 LF 321 >UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CV67_VARPS Length = 300 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 120/302 (39%), Gaps = 9/302 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L IDLNLLT+ A+ + + AA+ L+L A+S ++ +LR + DPL +R+G Sbjct: 1 MKPIELSRIDLNLLTVLAALMRERHVSRAAQRLHLGQPAVSHALARLRELTGDPLLVRQG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYR 137 + + PT A+ L + + LE I + ++ R I T + +LP + R Sbjct: 61 RVMEPTERALALMQGLGPALEQIEATFRAQADFEPARAAPVFRIGLTDDLQIAMLPRLLR 120 Query: 138 AIKTHYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 A+ P+ L + +A L + Q ++ + + + T L+ R Sbjct: 121 ALSVEAPRARLVTLTVCYRNAARYLDEGQVSAVMTFLKDLPAGAKIRKVRTARFALL-RA 179 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 + + HVL+ + + + E+ R++ F+ ++ A++A Sbjct: 180 D--TAAARLTLDDYCRRRHVLVTYAGDLCGTVDETLNELGRQREVAFSVPQFGSLPAVLA 237 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +++LA +P S L P + + + +D + + Sbjct: 238 GTELLATVPEHVALALSAQGGLRCEALP-FESPSYQIKLAWRAVTDKDAAETWLRRAMLR 296 Query: 316 AF 317 AF Sbjct: 297 AF 298 >UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=Pseudomonas RepID=B0KG68_PSEPG Length = 324 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 129/308 (41%), Gaps = 9/308 (2%) Query: 11 LSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVI 70 + G P LR D+NL+ +FEA+ + + AA+ L + +S ++ +LR + Sbjct: 6 PHNTNGPGAPMNRNELRKADINLMVVFEALMQERNLTRAAEKLFVAQPTVSAALARLRAM 65 Query: 71 FPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSV 127 F DPL +R G + P+A A + +Y++ L+++ AL + +D + T I + V Sbjct: 66 FNDPLLVRVGNRMEPSARAEEVIKYLTPALDAMSVALSLTHDFDPLTSKMTFRIGLSDDV 125 Query: 128 GALVLPVIYRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLF 185 + +LP + RA++ P +++ + + L+ + I + VL Sbjct: 126 ESGLLPPLLRALRVEAPNVVVVVQHVDYWRIPDLLAAGDVTVGISQTKGLPANAKRKVLR 185 Query: 186 TDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSY 245 T ++ R + + HV + P + ++E+ +R++ + Sbjct: 186 TMQGRVV-RAD--KSATPLTLDEFCARPHVQVSPTANTQGVVDDWLKEIGRERKVVLSVP 242 Query: 246 NILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPI 305 ++ A++A +D+LA P R L+ P ++ ++ + + DP Sbjct: 243 QFSSLPAILAGTDLLACCPDYAAQGMERWGNLQAEQLP-FETTALELAMVWLSTTDSDPA 301 Query: 306 LHGVIDVI 313 + + Sbjct: 302 ERWLRSRL 309 >UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MT9_RALEJ Length = 334 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 117/297 (39%), Gaps = 6/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +DLN L + +A+ + + AA+ L L+ A S S+ +LR F D L + G+ Sbjct: 1 MRFNKLDLNQLVVLDALLSTRSVGKAAERLFLSQPATSCSLARLREYFEDDLLVAVGKTQ 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A+ L + + L I S+D R I ++ V ++ L + R Sbjct: 61 VLTPLALGLRKPVRDVLLQIQTITRARPSFDPATSTRRFIIESSDYVISVFLSQVIRRAA 120 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + IS L + +L+I F LF D + + + Sbjct: 121 EAAPLMQFDLRAISPQTPEHLESGEAELLIAPEFAMVPGHPSEPLFEDTFSCLVSADSTV 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPD-RQINFTSYNILTIAALVANSD 258 ET +AAH+ + R+ R+ + + + + AL++ +D Sbjct: 181 GQDGLTVETYFDAAHIGVEWGGGRRVTFDSRLIATGKRTRRQDVIAPSFTLVPALLSGTD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +A +P+R ++ + L ++ P ++ + + K+ DP + + +++R Sbjct: 241 RIATLPTRLAEQMAQRFGLRRVTCP-IDLPAFSEHLQWQKYQESDPAIVWLRELLRE 296 >UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B6V0_STRRD Length = 313 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 115/291 (39%), Gaps = 5/291 (1%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL +A+ + AA LN + A+S+++ ++R DP+ +R G+ + PT Sbjct: 2 LDLNLLVALDALLEEGSVAGAAARLNTSAPAMSRTLGRIRRQLNDPVLVRAGRHLVPTPR 61 Query: 89 AMHLHEYISQGLESILGALDI---EGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ LH + + L RT + + + + + + A+ P Sbjct: 62 ALELHAAVRDLVRQASALLVPAGDPAPATLARTFNLQASDMLLSALAAPLVLAVGQRAPG 121 Query: 146 LLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 ++LR P + + + L + + DL I + L T +V + RE +PL+ Sbjct: 122 VVLRFLPDTLEGTSALREGRVDLEIGVIDHAAPETCVEPLGTGRIVGMAREDHPLVIKGV 181 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 +A HV + + + + R+ T + L SD++ + P Sbjct: 182 TLRRFADAKHVGVSRHGRLHGPIDDLLAARGLRRRTAVTVSSHSMALLLARQSDLVCLAP 241 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + + L P L +++ ++ ++ + D + D +R Sbjct: 242 APADDDLPAALGLRAFEIP-LELPEVEVAMAWHPRNDADGGQRWLRDQVRE 291 >UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. R11 RepID=B7QWJ8_9RHOB Length = 320 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 116/302 (38%), Gaps = 11/302 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +DLNLL + +AV+ V A + L L+ SA+S ++ +LR DPLF+R+G + Sbjct: 1 MNFATLDLNLLRVLDAVFAEGSTVKAGRRLGLSQSAVSGALSRLRHALNDPLFVRQGNQL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T FA L + L+ + L +D I+ +++P + + Sbjct: 61 VATEFAESLRHDLRAELDRLETLLSPPSHFDPATASGLFRISAADFFCDMLMPRLGDLLS 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + + L + Q DL + + LF ++ R GNP Sbjct: 121 RKAPGIRAQLLDLVPRHHVESLERQQADLALLPDTDLPDWMMREPLFRSEYAVLARRGNP 180 Query: 199 -----LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 + + HVL P + + + ++ R++ T + + Sbjct: 181 ATKDLRHGERMPFDLFCSLPHVLFAPHGDLTAQSDEALAKVGRRRRVVMTVPVFSGVCRV 240 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 V+ SD++ ++P + + L+ P + + I +++ + P+ + I Sbjct: 241 VSESDLIGLLPLQLARKVQPVYGLDLF-VPPIAIDPIQLIGVWHRKADTAPMAAWMRQQI 299 Query: 314 RN 315 + Sbjct: 300 FD 301 >UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobacteraceae RepID=A0NZC9_9RHOB Length = 305 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 5/299 (1%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR+ DLNLL IF A+ I AA + L+PSA+S ++ +LRV+ D LF R +G Sbjct: 1 MVNLRSFDLNLLVIFRAIMQRGSISGAANEIGLSPSAVSHALARLRVMLNDELFFRTAEG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI 139 V+PT A L I +GL I A+ ++ + R T+ V +LP + + + Sbjct: 61 VSPTERARELSVDIERGLSFISTAISLQHQFVPAETNRVFTMQVADYVAGFLLPRLAKRL 120 Query: 140 KTHYPQLLLRNPPISDAENQLSQF-QTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 ++ P + + P S + + + + V+ L D +V++ R G+P Sbjct: 121 QSEAPGITIDILPFSISPESVWDRVDMQVRLTPGRLQPEMVRSQRLLADEIVVLMRRGHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E HV L + + + R + T + I +VA SD Sbjct: 181 RVDEPMTAELYAELPHVKLSQSATGTTVIEDALAARGLKRHMAMTVASWFEIPDIVARSD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 ++AI P R +L R L P P F + ++ R+P + +I F Sbjct: 241 LIAIAPQRLLSLDPRLGKLHSAPLPLDEV-VFSFDLCWDLRKEREPGQKWLRQLIVEMF 298 >UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=Rhizobiaceae RepID=C6B2W9_RHILS Length = 334 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 68/309 (22%), Positives = 129/309 (41%), Gaps = 18/309 (5%) Query: 22 IFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQ 81 L IDLNLL +FE V + + + + LNL+PSAIS + +LR++ DPLF++ + Sbjct: 3 NHIDLSRIDLNLLVLFETVMEERHVGRSGQRLNLSPSAISHGLGRLRMLLGDPLFLKTPK 62 Query: 82 GVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRA 138 GV PT A L I+ L + + +D QR TI V ++ LP + Sbjct: 63 GVVPTDRAEELAAPIADILARVRSVVATAEPFDPAHSQRRFTIGAPDGVSSVFLPPLLDL 122 Query: 139 IKTHYPQLLLRNPP-------------ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLF 185 + P + + DA L D+ I +L+ Sbjct: 123 LAKFAPGIAISVRQLLPKQGEPSPDLAWRDALAALEARDMDIAIIPQAGFPIRFASLLLY 182 Query: 186 TDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSY 245 ++ V+ R+ +P L + T A H+++ + + R++ T Sbjct: 183 EEDFVIAARQCHPFLIDQ-TLATYCAAQHLVVSHLGDTHGFVDNLLASHGCSRRVALTVP 241 Query: 246 NILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPI 305 N + A++A +D ++ +P RF + + + + + P L + + K ++RD Sbjct: 242 NFMLALAVLAETDFISALPRRFVEMHAARFGVVSV-NPPLPLGRFAINATAPKAAIRDEG 300 Query: 306 LHGVIDVIR 314 + ++ +++ Sbjct: 301 VAWLVRLLQ 309 >UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteobacteria RepID=Q7MQI2_VIBVY Length = 321 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 8/291 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL + + AA LNL+ SA+S+ + +LR + DPLF R+GQ + PT A Sbjct: 18 DLNLLVALRVLIEESSVSKAAVRLNLSQSAMSRVLGRLRDLLGDPLFTREGQHLLPTEKA 77 Query: 90 MHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 + + + + LES+ L +D +T TIATT +LP I P + Sbjct: 78 LEIDRALGEPLESLRQLLS-PSEFDPHLCTQTFTIATTDYAMQTILPFALPRIYQEAPNV 136 Query: 147 LLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 P+ +QL+ DL I ++ VL ++ + + +PL E Sbjct: 137 SFHFLPLQHDRLADQLTYEGADLAICRPTGPVEPLRSEVLGRVGVLCLLSKQHPLAGKEM 196 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 H ++ + + + Q + + P R++ +Y++ A+V ++ +P Sbjct: 197 SLADYLYYPHAMIAISDGVKALIEQALVDQ-PQRKMVLRAYHLEAALAIVDTMPLIITVP 255 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + L + + L P D+S+ ++ P + V+R Sbjct: 256 ADLAYLVAERYDLVVKALP-FQFTPFDYSMIWHPRCEHSPAQEWLRSVVRE 305 >UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q399F7_BURS3 Length = 313 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 110/293 (37%), Gaps = 9/293 (3%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 ID +LL I + + A++L + IS ++++LR I DPL +R G + PT+ Sbjct: 6 IDAHLLKILHTLITESSVSRTAELLGQSQPTISVALRRLRAITGDPLLVRSGSRMVPTSH 65 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 AM L E + Q L I L+ ++D RT I + + LP I A K P Sbjct: 66 AMTLVEPLDQALAGIAAVLNPASTFDPATTHRTFRIGSPDYLDVFFLPAIVDAFKHEAPG 125 Query: 146 LLLRNPPI----SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 + + E+ L DL + N + + L D++V + R+ + + Sbjct: 126 ARIEFQHLMTVDGGYEHALESGSLDLAVGNWSTPPQQLHLQPLCRDDLVCVMRDDHRIRR 185 Query: 202 LEDDRETIDNAAHVLL-LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + + A H+ + + + + R + T ++ S++L Sbjct: 186 GQLTADVYREADHLGVTTHHATGLGTIDRELARGGLSRNVTTTMPYFGMAPYVLMRSNLL 245 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 F PL P P + + + ++ + R + ++ Sbjct: 246 FTTTRTLATHFCSLLPLRIEPIPC-EPQALTYYQLWHDRTHRSAAAVWLRRLV 297 >UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C014_DICD5 Length = 303 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 109/277 (39%), Gaps = 10/277 (3%) Query: 44 KGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRK--GQGVTPTAFAMHLHEYISQGLE 101 + I +AA L ++ A+S + +LR F D LFI G+GV PT A L I+ L Sbjct: 22 QNITHAAARLGISQPAMSARLSRLRATFGDQLFIPSPHGRGVLPTPRAESLRPQIASVLH 81 Query: 102 SILGALDI--EGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNP--PISDAE 157 I L+ + RT IA + ++ + P + LR + Sbjct: 82 DISAMLEPIHFDAASSSRTFVIALHENPALMLGADLVNQFSEAAPGIRLRFALPESARLP 141 Query: 158 NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLL 217 QL D+ I + LF D R+G+P S D ++ H+++ Sbjct: 142 EQLETGDIDIYIGVNAGAHDAWIRRKLFDDEFATAQRKGHPRGSAPLDLKSYCALPHLVV 201 Query: 218 LPEEQNF-SGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP 276 E F + Q + + R + ++ + +VA +D+L +P R F++ Sbjct: 202 SSEGDPFTGFVDQTLAGLGYQRSVVMSTQSYAMAPPIVAGTDLLCTLPRRMLQRFTQTLD 261 Query: 277 LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + P L + I S++++ + DP + + Sbjct: 262 IFD---PPLPLQPIVISMYWHPKNSHDPANVWLRAQL 295 >UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SSQ1_AERS4 Length = 322 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 17/308 (5%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + L IDLNLL I + + + AA+ L+L+ SA+S+++ +LR F DPLF+R Sbjct: 1 MLLEQLGRIDLNLLIILQVLLEERNGSRAARRLHLSQSAVSKALGRLRETFDDPLFVRSA 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 G+ PTA A+ L + + L S+ + +D +R IA+ S L P+ Sbjct: 61 YGLEPTARALVLQQQLQPILLSLDNLIQPPD-FDPASTEREFVIASMDSAFTLFAPLYLS 119 Query: 138 AIKTHYPQLLLRNPPISD-AENQLSQFQTDLIIDN----------MFCTNRTVQHHVLFT 186 +K P + LR ++ + ++SQ Q D+ + + +L Sbjct: 120 ELKRQAPGIRLRYEEWTENSLTEMSQGQVDIAFTVRENCISSDFRLDTLPNAICQRLLAI 179 Query: 187 DNMVLICREGNPLLSLE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSY 245 D++ + + +P L D HV E ++ L ++ M R+I T Sbjct: 180 DDLTCLVQHDHPALHEPEWDLARYLAYPHVQTYCEGRDRWMLDHKLAGMDLYRRIEATVP 239 Query: 246 NILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPI 305 + + +SDM+ + + ++ +PL LP P + + I + +++ DP Sbjct: 240 SFEAALRMGMHSDMIVTLSRLYARHATQVYPLVPLPLP-IALDSISHLLIWHQRHEEDPG 298 Query: 306 LHGVIDVI 313 + + + Sbjct: 299 HRWLRETL 306 >UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS61_DESAD Length = 310 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 6/300 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 T N+DLNLL I + ++ + + A L +T SA+S ++ KLR F D LF+R+G Sbjct: 1 MSKTNSSNLDLNLLVILDTIFTERSLTLAGNKLFMTQSAVSHALSKLRHHFDDRLFVRRG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYR 137 + PT +H+ I+ L++I +L G +D +RT ++ + + L+LP I R Sbjct: 61 NIMEPTPLCKTIHQNIAPSLKAINQSLADRGEFDPASSKRTFSLGLSDYLCKLLLPEILR 120 Query: 138 AIKTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 I + + +R E L + D+ + V LF D V + R Sbjct: 121 LIDSRALGISIRIMQTTYEKREEMLQSGKLDVFLGCPRNYGAGVLKEKLFEDREVCVVRN 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 +P+ + E + L E L + R+I I +LV Sbjct: 181 DHPIKGEVMNEEEMAENEFAALSLSESGLGFLEDYLYRKGVQRKIKIVLQQETVIPSLVE 240 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 NS+++ I R +++ L + P N E + S H++ + DP + VI+ Sbjct: 241 NSNLVGSIAQRLAEMYAAKGRLRIVHMPLENTE-FEVSQHWHSLNDNDPAQQWIRSVIKE 299 >UniRef50_A9R140 Substrate-binding transcriptional regulator, LysR family n=34 Tax=Enterobacteriaceae RepID=A9R140_YERPG Length = 322 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 135/299 (45%), Gaps = 6/299 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 K I LR++DLNLLT+F+AV + + AA+ L ++ A+S ++ +L+V+F D LF+R Sbjct: 19 KESIDVHLRSVDLNLLTVFDAVMQMQNVTRAAQSLGMSQPAVSNAVARLKVMFNDELFVR 78 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGAL--DIEGSYDKQRTITIATTPSVGALVLPVIY 136 G+G+ PTA A L + Q L+ + L + + +R ++ + + I Sbjct: 79 YGRGIQPTARARQLFGPVRQALQLVQNELPGAGFEAKNSERLFNLSICSPLDVRLAAQIV 138 Query: 137 RAIKTHYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICR 194 + +K P + L + E+QL +T+ +I LF D +VL Sbjct: 139 QRVKQSAPNVQLVIKSYLNDNIEHQLRYQETEFVIGYTEFDRPDFHRIPLFKDELVLAVS 198 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 + +P ++ + + +H ++ +++ S + I + S ++ ++ +V Sbjct: 199 KDHPRINDSITENQLLSESHAVVSLDKKG-SFSEPYYDSTTSTQSIAYESTDMNSVLNIV 257 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + + +AI P +S L+ + P N + +++ + RD + ++ Sbjct: 258 SQTYFVAIAPRWLVKTYSEALNLKLISLPWENT-SRACYLTWHESTDRDKGHQWMKALL 315 >UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WJY9_BORBR Length = 329 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 64/301 (21%), Positives = 124/301 (41%), Gaps = 8/301 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + NID+ LL + + + A L+++ A+S ++ +LR++F DPL +R G Sbjct: 19 IPAMDNIDIKLLRTLLVLMSERSVSRTADRLDVSQPAVSHALARLRILFDDPLLLRSRAG 78 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAI 139 + PT A + + + L +D +R ++ L++P I+R + Sbjct: 79 MVPTDRASEIEARVRRLLAEYDALAHRPQPFDPSVSERHFVLSAPEYAEHLLMPPIFRHL 138 Query: 140 KTHYPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + H P + + A L + DL I + ++++ LF D +V I + Sbjct: 139 RAHAPNIRVEVRAPDPERAYELLESGEVDLRIAWLRKPAQSLRSMQLFQDRIVCIADRDH 198 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFS--GLRQRVQEMFPDRQINFTSYNILTIAALVA 255 P L H +N S + + V+ + F N LTI + Sbjct: 199 PALDGTLSLADFLRYPHARPWGMGRNMSGRVIDEAVELLGKKLAPPFLVQNFLTIPYTIT 258 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 SD+LA++P F+ P++ L P L ++ + ++++ S +D + V+ Sbjct: 259 GSDLLAVLPLVLARAFAAQQPIQILEVP-LRLPRMRYGAYWHERSHKDVGHKWLRSVVLQ 317 Query: 316 A 316 A Sbjct: 318 A 318 >UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida KT2440 RepID=Q88LJ0_PSEPK Length = 320 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 126/281 (44%), Gaps = 8/281 (2%) Query: 41 YVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGL 100 Y + + AA+ L ++ S S+++LR F D LF+ G+G+ PT F + + +S L Sbjct: 18 YREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGMRPTPFTVSIAASVSGVL 77 Query: 101 ESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNP--PISD 155 E I + + ++ + R TI+T+ + +P I R + P LR P Sbjct: 78 ERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLGEDAPNTDLRCVSLPHQQ 137 Query: 156 AENQLSQFQTDLIIDNMFCTN-RTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAH 214 E L Q DL + V+ LF N I R +P + E A H Sbjct: 138 LEQALEQGSVDLAVGYFPDLQGEQVKTQALFEHNFTCIVRRNHPSIGDTLSLEQFLAADH 197 Query: 215 VLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRC 274 +++ E ++ QR++E+ R+++ + +++ L+A+++M+A +P F+ Sbjct: 198 LVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIASTNMVATVPLSLGVWFASE 257 Query: 275 WPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 ++ L P + E+ + +H+++ DP + + + Sbjct: 258 -QIKML-TPPIEVEKFELKLHWHRQMEDDPAVSWFRNAVFE 296 >UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas RepID=A4XRF8_PSEMY Length = 320 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 113/296 (38%), Gaps = 9/296 (3%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 LR D+NLL +FE + + + + L L A+S ++ +LR +F DPLFIR G Sbjct: 2 MNRNDLRRADINLLVVFETMMHEQNVSRVGEKLFLGQPAVSAALGRLRHLFDDPLFIRTG 61 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYR 137 + + PT+ A + ++ L+SI AL ++D T I + V +LP + R Sbjct: 62 RVMEPTSRAQEIFSNLTPALDSIAAALGKCQTFDPTTSEATFHIGLSDDVEYALLPTLLR 121 Query: 138 AIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICRE 195 ++ P + L L+ + L I + + L + +L+ R Sbjct: 122 HLRVDAPNIRLVVRRADQWQLPQLLASGEISLGISHALQLPANARSKHLRSIRPMLL-RA 180 Query: 196 GNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVA 255 + + E H ++ + + + R++ + L+ Sbjct: 181 DS--QAGALTLEEFCRRPHAVVSSMGNVIENADRALHSLGRQRKVVLAVPQFSALPMLLE 238 Query: 256 NSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVID 311 S M+AI+P S L P + Q + S+ + + DP + Sbjct: 239 GSSMIAIVPEYVAQAMSGSGGLRAEAVPVV-LPQQELSMVWRGAAHSDPGERWLRS 293 >UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6I2_SPHWW Length = 301 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 6/295 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL F+ + H+ + AA+ ++L+ SA+S ++ +LR F D L + +G+ + Sbjct: 1 MRFQGLDLNLLVAFDTLAEHRSVSLAAEAMHLSQSAMSAALARLRAYFDDELLVPRGRTL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L + L I + ++D +R TI + V A++L R Sbjct: 61 VLTPRAEQLAPEVRDTLLRIHATIAHPAAFDPIETKREFTIVASDYVQAVLLEPFMRKAA 120 Query: 141 THYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 H P + R PIS ++ + DLII LF D LIC +P Sbjct: 121 HHAPGMRFRILPISQQGIDEFKRGVIDLIIVADSVILPEHPSQKLFEDEAKLICSADHPT 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFS-GLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + E E HV + E R+I +A V ++ Sbjct: 181 IGDEISMEQFGTVGHVTTSLHHHRPGSLFDLMLLERSIARRIEIQVPAFSMMAGAVVGTE 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +AI+ +R ++R P++ L P I I ++ RD L +++ + Sbjct: 241 RVAILHARLATSYARILPIKLLSLP-FALPPIREVIQWHALRQRDRGLQWLLEAL 294 >UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales RepID=B7VQV6_VIBSL Length = 315 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 107/291 (36%), Gaps = 7/291 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L NI+LNLL + + A+ L++T SA+S+ + +LR + DPL +R G + P Sbjct: 2 LGNINLNLLRSLHVLLEECHVSRTAQRLHITQSAVSRQLAQLRDLCGDPLLVRDGNKLVP 61 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L + L LD + +D Q + +A++ V +LP+I + Sbjct: 62 TNRALLLKGKLDDLLGEFDHLLDDK-PFDPQDWQGELVLASSDYVAQYILPIIVSEVSKD 120 Query: 143 YPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS 201 P + L + L++ L V L D V + R +PL Sbjct: 121 APHINLAYRLWQPNFLETLNESGIHLASSMFPKKPDHVSSIKLGEDKSVCLMRASHPLAK 180 Query: 202 LE-DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 E I N +H+ + S +++ R+I + ++ D L Sbjct: 181 QSAISSEDIVNYSHIKVTGGGDKDSYSDIALKKQGHKRRIALQVPFFSSAGNVLMQDDYL 240 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVID 311 I+P R + P E + + ++ D + Sbjct: 241 MIVPEHIAYNLGRHLDVAYFSLP-FETEMHTYWLMWHPKYDNDSAHKWARE 290 >UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYZ8_9VIBR Length = 304 Score = 269 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 113/289 (39%), Gaps = 7/289 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 +LNLL E + K + AA+ LNLT SA+S+ + +LR I+ DPL +R G T A Sbjct: 6 NLNLLYTLEVLLAEKHVSRAAERLNLTQSAVSRQLSQLRDIYHDPLLVRNGNHYVLTPRA 65 Query: 90 MHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 L + ++I L + +D +T T +++ V +LP + + + P + Sbjct: 66 ERLGAELEDLFQNITKVL-GQADFDPLLFDQTFTFSSSDYVAQYILPELVELLSSLAPTM 124 Query: 147 LLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS-LED 204 D +LS+ L + + + D V++ R+ +PL Sbjct: 125 QFAYRLWEPDNLAKLSEIDVQLASTMLPEAPLGLSSQQIGEDIPVIVTRKNHPLSGTKTI 184 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 + + H+ + S L + ++ R+I ++ + AL+ +D L +P Sbjct: 185 TEQELGAYPHIRISGGGDKDSFLDREMKARSLKRRILVSTPFFSSAFALLQQTDALLTVP 244 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + L + P + + ++ +P + + Sbjct: 245 LHIAVNLKKTQKLHVIDIP-FTVPTYKYWLIWHPKYDHEPAHIWTREHV 292 >UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMZ3_9GAMM Length = 303 Score = 269 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 107/281 (38%), Gaps = 5/281 (1%) Query: 39 AVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQ 98 + + + AA+ L+LT SA+S+ + +LR F DPL IR+G +A A L I Sbjct: 14 VMLEERHVTRAAERLHLTQSALSRQLSQLREHFSDPLLIREGNEYLLSARAKQLLPKIQA 73 Query: 99 GLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPIS- 154 L + L S+D +R + A T V + P I ++ P + + Sbjct: 74 ILTEVDE-LSEGDSFDPLQCRRRFSFACTDHVAQFIFPEILGRLRDEAPGIDITFEMWRP 132 Query: 155 DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAH 214 + +L Q D+ V+ + D+ V + E +PL + E E + Sbjct: 133 EWLGRLGQLPLDIASTTTANLPENVRSIHIGQDSPVCLMAENHPLAACELSIEKMLEYPF 192 Query: 215 VLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRC 274 + L S + ++ M R+I + + S +L I+P Sbjct: 193 LRLNSGGDKDSFFDKALESMGLQRRIQYEVPFFSAAFQALEGSSLLMILPHHIAMNALEH 252 Query: 275 WPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +PL P + + + +++ +DP + +I Sbjct: 253 FPLAVAQLPLAEVPKNQYHMCWHEVHDQDPAHSWLRQLIAE 293 >UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q081K6_SHEFN Length = 326 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 11/297 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++ +DLNLL IFEA+Y + + A+K L +TPSA+S +I++LR++ DPLF+R+G + P Sbjct: 25 IQQLDLNLLKIFEALYSEQNMTLASKSLFITPSAVSHAIKRLRLVLNDPLFVRQGLQMQP 84 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 TA + + L I L G +D ++T IA ++ + ++P + + + Sbjct: 85 TAACQRMAPQLISALNRIRQVLQQCGEFDPLTTEQTFKIAIHEALESQIMPTLIKQVVKL 144 Query: 143 YPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG---- 196 P + + +S + QL+ + DL ID N + H L +D ++ Sbjct: 145 IPHAKIASMSLSRENIARQLANGEVDLAIDVARAVNAPLAHKTLLSDPFCVLIDRRQHAM 204 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 + S + NA HV + +Q+ +R I + + T A +V Sbjct: 205 HLEPSTKLTPTDYANAEHVAVSSRPIGRVMEDILLQQQGVNRHIKYRCQSYQTAAKIVIG 264 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 S ++ +P F L P ID ++++ + DP + I Sbjct: 265 SPLMLTLPRSIAEQFI-HPDLHVCTMP-FELPDIDTHLYWHMNTETDPAFVWLRAQI 319 >UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEA0_SPHWW Length = 309 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 119/303 (39%), Gaps = 12/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR +DLNLL +A++ K + AA+ +N++ +S ++QKLR F DPL R G+ + Sbjct: 1 MHLRGLDLNLLIALDALFTEKNVTRAAERINISQPGMSAALQKLRWHFSDPLLERVGRRM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T L + + + L + D +D +R I T ++ + I+ Sbjct: 61 ELTVRGRALADPVREILIKVRDLTDKPEEFDPATARRVFRIGATTFCSDILAAPLLCRIE 120 Query: 141 THYPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFCTNRT-------VQHHVLFTDNMVLI 192 P + ++ + +D ++L Q D I + LFTD VL+ Sbjct: 121 RIAPNISVQFEDLATDTVHRLVDGQLDFAITISARILSDEVNLDSSLSSLDLFTDAFVLV 180 Query: 193 CREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 N + + + ++ Q ++ QI N Sbjct: 181 TSRQNSRVGDAVTFDQLCELPYIETRFGNVIAGISEQMWRQQPKQPQIRAWLPNFQLTLD 240 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 V+++DM+AI+P L + + LP P + I+ + +++ + +D + Sbjct: 241 TVSHTDMVAIVPLHLAQLHGDRYNVRTLPVP-VEMPTIEERLFWHQRNDQDAGHSWFKGL 299 Query: 313 IRN 315 ++ Sbjct: 300 LQE 302 >UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=Gammaproteobacteria RepID=Q5E2I6_VIBF1 Length = 323 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 126/294 (42%), Gaps = 9/294 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR +DLNLLT+F+AV + I AA+ L ++ A+S ++ +L+++F D LFIR G+G+ P Sbjct: 18 LRGVDLNLLTVFDAVMQEQNITRAAQNLGMSQPAVSNAVSRLKLMFNDELFIRHGRGIQP 77 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A L + Q L+ + L ++ + R ++ P I + I+ Sbjct: 78 TQRARQLFAPMRQALQLVKNEL-PSSTFSPETSMRQFKLSICSPSDIRFAPRIMKDIQNK 136 Query: 143 YPQLLLRNP--PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L+ D +L + D +ID + LFTD +V++ +P L Sbjct: 137 APHISLKLSGEHEPDIAQKLRYQEVDFVIDYVRFDEPGFMSTELFTDELVVVASVNHPRL 196 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 ++E + + H + + ++ + +I I +V+ S+++ Sbjct: 197 QNGINKEQLASEKHAVPARIANTKGFADHLYVDSLYEQ--AYKGASISNILYVVSQSELI 254 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + P N L LP P + + I + ++ +D + D + Sbjct: 255 TVAPKWLVNSMPNRDQLMVLPLP-IESKGISGYLSWHDSYQKDKGHIWMRDQLM 307 >UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GFT2_SILST Length = 299 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 118/293 (40%), Gaps = 6/293 (2%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +D++LL +F AV + + AA+ L + S +S ++ +LR D LF+R GV PT Sbjct: 3 VDISLLRVFHAVMEERNVTAAARRLGQSQSTVSAALARLRDALGDELFLRARYGVEPTEK 62 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ + I+ GL+ + A +D R + P ++ P + A H P+ Sbjct: 63 ALQIAPDIAAGLDRLEQAFRAAEPFDPIRSTRRFRLLLGPYAEVVLAPDLAEAFAQHAPK 122 Query: 146 LLLRNPPISDAEN--QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLE 203 L PI + +L+ DL I + LF+D I Sbjct: 123 AQLELAPIGPDLDPRKLAAQSFDLAIGRFAPPPDDLVVSDLFSDGFRCIVAPAALPEGAS 182 Query: 204 DDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAII 263 D + + HV++ P + +G+ + R + LT A VA + +A + Sbjct: 183 LDLDLYETLPHVIVAPPGRWRTGVHKLTAASGLQRNTAVAVSHFLTAAPTVARINGIATV 242 Query: 264 PSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 P+R + + + L + P + I ++ RDP + D++ + Sbjct: 243 PARIAAMVAAPYGLRNVAVPR-DLGTFPTQIAWHPHQRRDPRHVWLRDLLLSL 294 >UniRef50_B9K150 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K150_AGRVS Length = 318 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 116/297 (39%), Gaps = 5/297 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +N+DLNLL + + + + AA+ + +T SA+S ++ +LR F DPL I+ G+ + Sbjct: 1 MRFKNLDLNLLVALDTLIRVRNVSRAAEEMFITQSAMSNALGRLRDYFDDPLLIQVGRSM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPVIYRAIK 140 + A L + + I A+ S+ + R+I + + ++P R + Sbjct: 61 ELSPLAASLELPLRDIIVRIEAAVVSTPSFIPHESTRSINLIVSDYTLNTIMPPFLRQVT 120 Query: 141 THYPQLLLRNPPISDAEN-QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P + + P + + L + + DL++ + D + + PL Sbjct: 121 ALAPGVQIHFQPQQNYPHLLLERGEADLLVAPSDFCSTNHPSEPFLEDQICCVVDVNGPL 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + A HV++ P + ++ + ++ ++++ ++ L+ S Sbjct: 181 AEGPMTEKDFLEAGHVVMQPPNGGETFAQRACDRLGLKIKVEASTFSFSSLPFLIRGSKR 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 +A++ + + P + + ++ + RDP L + A Sbjct: 241 IAMVQRSLAECMLNLGGIRIMDPPFPLPPLLQ-CLQWHSYRTRDPALVWFRSQMHEA 296 >UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=Enterobacter sp. 638 RepID=A4WEP5_ENT38 Length = 308 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 112/277 (40%), Gaps = 6/277 (2%) Query: 42 VHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLE 101 + AA+ L+L A+S ++ +LR +F DPLF+R G+ PT A L + +E Sbjct: 25 REGSVSRAAEKLHLGQPAVSNALARLREMFNDPLFVRTAGGMIPTPRAEALIAELGPLME 84 Query: 102 SILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAEN 158 + L S+ + + V + ++P + + P + L+ + Sbjct: 85 QMQHVLFQPASFTPASASHVFRLGMSDWVESWLMPELQAYVIREAPGITLQVSASDPFRD 144 Query: 159 --QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVL 216 Q+ Q + DL I T T++ + + N + L+ + HVL Sbjct: 145 GKQVLQREIDLAISVGQSTAATLRRENIRSLNFSTLWHPEQLSLAAPLTVKNYVEHDHVL 204 Query: 217 LLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP 276 + +S + ++ R++ + + + ++ L+ LA +PS + + Sbjct: 205 VSYRGSAWSAIDDQLALQGQSRKVRYVTPHFSSLPPLLKRIPALATVPSGLAAAWVTHYG 264 Query: 277 LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 L P P + +I S+ ++K S D L+ + V+ Sbjct: 265 LRCSPVP-IQTPEIPLSLLWHKKSDNDMPLNWLRGVL 300 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 130/297 (43%), Gaps = 10/297 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 LR++DLNLL + EA+Y + + A++VL++T A+S ++ +LR+ F DPLF+R+G+GV Sbjct: 1 MNLRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGV 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PTA L I + L+ + L+ ++ R I++ + ++ P I R ++ Sbjct: 61 KPTAMTEALMPAIRESLDKLRNGLEPRSVFEPSRSTRVFNISSRDASAHILAPPIARRLE 120 Query: 141 THYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + + P S ++L+ + DL ID ++ +L + V +P Sbjct: 121 VQAPGVRISWSQPQRSAIASELASGRLDLAIDVQDLRGADLERVLLSSTKYVCALASDHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L + + + H+ + + S + + + + + +V + Sbjct: 181 LANEPLTLDKFFSMRHIAVSSRREGRSLIEEMARSLGHRITPVHRLPHYQPALEVVRCTH 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 + P + L + P + +++++ +DP L + +IR+ Sbjct: 241 LALAAP----QPVTEGSGLAVMKLP-FDFPSPGSMLYWHREYAQDPALMWLRGLIRD 292 >UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A8FU12_SHESH Length = 304 Score = 267 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 6/301 (1%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 L +DLNLL A+ + + AA+ +N++ SA+S ++ +LR +F D LFIR Sbjct: 1 MNENNLAKVDLNLLKSLRALIEERHVGRAAQKMNVSQSAMSHTLARLRGVFDDSLFIRNA 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIE--GSYDKQRTITIATTPSVGALVLPVIYRA 138 +G+ PTA A+ L + + L I L + I T + A L ++ Sbjct: 61 KGLEPTARAIELSDKLRFILREIDSLLAPKTLELSHIHAHFRIQTHDFILASYLSKAFKR 120 Query: 139 IKTHYPQLLLRNPPISD-AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 I P +L+ + + A ++L + ++II L +N+V + +GN Sbjct: 121 INHEAPNILIDIKILDETAYDKLDDGELEMIIGAGLQAKPRFMQKRLTDENLVCLLDKGN 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFP-DRQINFTSYNILTIAALVAN 256 P+L ETI H+ + + + + M R+I F + + L+++ Sbjct: 181 PVLKN-WTPETIFRYPHIKSSLLDDRDDPVSKYGKAMGLPKRKIGFLAETLNFQLPLLSD 239 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 SD++A +P S+ + L P + +++ D + + + I + Sbjct: 240 SDLIAFLPDSIAKKGSQVYGLVVKECP-FPLPPLTIRAMWHERHQNDVVHQWIREKIEDV 298 Query: 317 F 317 F Sbjct: 299 F 299 >UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A2SDX3_METPP Length = 326 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 120/303 (39%), Gaps = 14/303 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 I+L+L+ + V + + AA L T A+S +++LR + DPL +R G G+ P Sbjct: 7 FDKIELHLVRVLHTVITERSVSRAALRLRTTQPAVSAQLKRLRALVGDPLLVRSGTGMAP 66 Query: 86 TAFAMHLHEYISQGLESILGALDIEGS---YDKQR---TITIATTPSVGALVLPVIYRAI 139 TA A+ L E ++ L + +D T +A + + LP + + Sbjct: 67 TAVALQLLEPAAELLRNAERLFGSRAEALAFDPAHSETTFRVAASDYLDPQFLPALVTRL 126 Query: 140 KTHYPQLLLRNPPIS---DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 + P + + P+S D L++ + DL+I N + L +D +V + E Sbjct: 127 RAEAPGIRVEVLPLSAEFDYRKGLARGEVDLVIGNWLRPPAELHLGRLLSDEIVCLVAED 186 Query: 197 NPLLSLE--DDRETIDNAAHVLLLP-EEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 +P + E + H+ P + + + + R I S + Sbjct: 187 HPAVKSPRSWTAERYLASEHIAPTPLHPGARGVIDEHLDALGLARDIVVRSPYFGLGPQM 246 Query: 254 VANSDMLAIIPSRFYNLFSRCWP-LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 VA+S ++ F + + P L + P + + + +++ S + + V Sbjct: 247 VAHSRLVLTTGRLFCSRYVGQLPGLRIVRCP-VPFPALVYYQLWHELSHQSAAGRWLRGV 305 Query: 313 IRN 315 +R+ Sbjct: 306 MRD 308 >UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RD08_KANKD Length = 319 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 123/305 (40%), Gaps = 7/305 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 +R++D+NLL + + + K I NAA L+++ A+S+S+Q+LR + DPL IR Sbjct: 1 MVMQVENIRSLDMNLLVLLDVLLEEKHISNAADRLHMSQPAVSRSLQRLRDMLNDPLLIR 60 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVLPVIY 136 G G T A+ L + L + + + I+I + +L +P ++ Sbjct: 61 VGNGYQLTDKALELQPKLKSWLADFMCMMQPEKFEPAKAKGEISIMSMDLEMSLFMPNLW 120 Query: 137 RAIKTHYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRT--VQHHVLFTDNMVLIC 193 + ++ P + LR+ I D + L Q D ++ + + H+ L VL+ Sbjct: 121 QDLQVQAPNVALRSFNIRPDGISLLEQGDIDFLVSEEDKSLESTKYHHYHLIQHEFVLVM 180 Query: 194 REGNPLL-SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAA 252 + + L + H L+ + + + +++ R I Sbjct: 181 SKQHRLAKQKAIGMDEYLKQRHGLVTVTGKGKPFIDRTLEKQGLSRNIALYVPTFHLALD 240 Query: 253 LVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 + + +D++ +P + + P L +D +++++ + + + Sbjct: 241 ICSRTDLMFSMPRLVAEKEGERYGVVMKEMP-LKLPLLDIYLYWHERQHQTALHKWFRTL 299 Query: 313 IRNAF 317 +R +F Sbjct: 300 MRESF 304 >UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q122D0_POLSJ Length = 310 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 120/303 (39%), Gaps = 11/303 (3%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 R +DLNLL + A++ + +A K L+L+ A S ++ +LR F D LF+R G+ Sbjct: 1 MNFRQLDLNLLRVLAAIHRTGSVTHAGKALSLSQPATSNALARLRDFFGDELFVRAPSGL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYRAIK 140 PT L + L ++ + ++ ++ + L LP + A++ Sbjct: 61 KPTRLCEQLAPAVLAQLLALETVVTGHEEFEAAHSDMHWRLSLSDLGEMLFLPALAGALR 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC----R 194 + P L N + +D L + DL I + R ++ +LF +N V + R Sbjct: 121 SQAPGARLSNISVAANDVAAALEAREIDLAIGILQPRQRGIRTELLFRENYVAVASPQWR 180 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 + + + AA V+ P + Q + M +I + + + L Sbjct: 181 PASGRSGRTLTTQQLAEAAFVVASPTATFHGSVEQMLVRMKLQDRIVLRARHFGALPDLA 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 +D+L+I+P + + + P + + ++ + DP + +++ Sbjct: 241 LATDLLSIVPEMYARNLRQRYDFRVWGIPG--APSYEVRLVWHSSTDNDPAHQWMRALVQ 298 Query: 315 NAF 317 F Sbjct: 299 QLF 301 >UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhodococcus RepID=D0FZR1_9NOCA Length = 311 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 130/301 (43%), Gaps = 10/301 (3%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 LR++DLNLL +A+ + + AA+ LNL+ SA+S S+ +LR +F DPL +R G+ Sbjct: 1 MKDLRSVDLNLLVDLDALLSMRSVTEAARRLNLSQSAMSGSLSRLRRLFDDPLMVRNGRV 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI 139 + T A L + + L I G +D + R+ +I+ + A+VL + R + Sbjct: 61 LVLTPRAEALIPPVKEILHQIDGVFAESDDFDPRTTTRSFSISASDYATAVVLAPLLRGL 120 Query: 140 KTHYPQLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRT-VQHHVLFTDNMVLICREG- 196 P + + P S D L DL+I+ + + LF+D V + Sbjct: 121 ADDAPNVTVNVLPRSPDVPAVLRLDSADLVIEPREMMGDSPLPGVSLFSDRWVCMLDGSM 180 Query: 197 N-PLLSLEDDRETIDNAAHVLLLPEEQNF-SGLRQRVQEMFPDRQINFTSYNILTIAALV 254 + P + +R+ H++ + + + + + R+I T + L L+ Sbjct: 181 HEPAVLARLERDHYLQLPHLVYSIGQDRQLNYADRHLASLGVRRRIELTVESFLMAPLLI 240 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + +++++ R ++ L + P + I ++++N DP + + Sbjct: 241 RGTSLVSLVLERAASML-PLDGLRLVD-PPIPVPGITDAMYWNPRHSEDPGHRWLRQRLA 298 Query: 315 N 315 + Sbjct: 299 D 299 >UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae RepID=Q7MEK1_VIBVY Length = 307 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 136/296 (45%), Gaps = 6/296 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 ++N DLNL+ IF A++ + + AA L+++ A+S+++ +LR I+ +PLF R GV P Sbjct: 7 MKNTDLNLIPIFVAIFEEQNLSKAAARLDISQPAVSKALARLRDIYDEPLFHRSPSGVEP 66 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAIKTH 142 T+FA+ ++ + ++ L ++ R +IA ++P + + I+ H Sbjct: 67 TSFAVDIYPAMLTAFKNFTSTLSASSEFEAKVSNRIFSIACVSVASYELMPQLLKQIRQH 126 Query: 143 YPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 P + L P+ D E+ L + DLIID T++ +F++ ++++C +P + Sbjct: 127 APNISLEVHPLFTEDYESDLRLQRYDLIIDMAPRGWTTLKVEPIFSERLMVVCCADHPRI 186 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + HV++ S + R+I + + L + ++ S+ + Sbjct: 187 ADACSVAQFLAEEHVVVSRWHARKSLMSAEDIADLAKRKIAYRASGALEMLPVIHGSEYI 246 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 ++P N F+ + ++ + P + + D ++ + + + ++ A Sbjct: 247 GMLPESTINAFAGTYNIKAVSLP-FDHDVYDLCAIWHPSRSSESAHQWLRNQLKAA 301 >UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9F0I7_SORC5 Length = 319 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 107/278 (38%), Gaps = 8/278 (2%) Query: 43 HKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES 102 + AA+ L L+PSA+S+++ +LR DPL +R G+G+ PT A+ L E +S ++ Sbjct: 18 EGSVTGAARRLRLSPSAMSRALARLRETLGDPLLVRAGRGLVPTPRALELRERVSHLVQG 77 Query: 103 ILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQ 159 L D + RT T+ T+ P + P + LR D ++ Sbjct: 78 AEAVLRPAEELDLKRLVRTFTLRTSEGFVESFGPALIERTGAQAPGVRLRFVAKPDKDSA 137 Query: 160 -LSQFQTDLIIDNMFC-TNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLL 217 L DL + T+ ++ LF D + + R +PL + HV+ Sbjct: 138 PLRTGAVDLETGVVDEDTSPELRTQALFRDRFIGVVRSDHPLGRAKITPARYAAGRHVVF 197 Query: 218 LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPL 277 + + + + R++ T AL +D++A +P L Sbjct: 198 SRRGVAKGRIDESLAALGLAREVVTIVGGFATAIALARATDLIATVPDHHTRSLRD--GL 255 Query: 278 EKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 P +I S+ ++ DP + D +R Sbjct: 256 FSFALP-FAAPEITVSLLWHPRLDADPAHRWLRDSVRE 292 >UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZQ9_DELAS Length = 323 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 118/294 (40%), Gaps = 10/294 (3%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL +A+ + AA ++L+ A+S ++ ++R F DP+ +R G+ + PT A Sbjct: 6 DLNLLIALDALLSTGSVTQAAGRMHLSTPAMSHTLARIREAFGDPILVRAGRSLVPTPRA 65 Query: 90 MHLHEYISQGLESILGALDIEGS---YDKQRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 + L E + L D + +R + + + + RA++ P Sbjct: 66 LALAEPVRALLAQARALQDPVDAGGLAGLRRRFVVRAPEGIAVVFGASLSRALEAEMPLA 125 Query: 147 LLRNPPISDAEN-QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS---- 201 L+ P + A+ L + + DL + + + + V+ +V + R G+PLL Sbjct: 126 SLQFLPETHADPGALREGRIDLDVGSFRSMDPETESLVISEQTLVGVVRAGHPLLKSARK 185 Query: 202 -LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 A HV + S + ++ + RQ+ + + + +D++ Sbjct: 186 SQRPSAAQFAAARHVGITQRPGESSPVDAALEALGLQRQLALLVPSSFSALIAASRTDLV 245 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 A +P+R + + L P + + + ++ DP + D I+ Sbjct: 246 ACVPTRTAHGMAASLGLVVFALP-IEVQVQPMRMAWHPRHQADPAHQWLRDCIQ 298 >UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNA4_9PROT Length = 299 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 110/293 (37%), Gaps = 9/293 (3%) Query: 28 NIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTA 87 N+DLNLL +F V + + AA+ L++ A+S ++ +LR D LF+R G+ + PT Sbjct: 2 NLDLNLLRVFALVMRERSLTRAARRLSVGQPAVSHALARLRSELGDALFVRSGRRMEPTE 61 Query: 88 FAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYP 144 +A + I+ LE I +L ++D RT I + + LP A P Sbjct: 62 WAKSFYAEIAPALERIDASLMSSRAFDPGSTDRTFRIGMSDDLQMAFLPQFLAAFTERMP 121 Query: 145 QLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL 202 L + + A L + L++ + + + + +I N + Sbjct: 122 NARLVVQQTNYTTAAEMLDRRDVSLVVGYLDTLPAAAKTRTISRVSYRMIMDSRN---AE 178 Query: 203 EDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAI 262 H L+ + + +Q+ R I + N + + + L Sbjct: 179 VTTLADYCAGKHALVTFAGDLIGYVDETLQQRGVARDIRLSLSNFAVVPYALRGTGYLVT 238 Query: 263 IPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 IP + + L P + D S+ ++ DP + D+I + Sbjct: 239 IPQYLAAVLANETGLVMAQLP-FESPEFDVSMAWSPTVDSDPGERIIRDLIVD 290 >UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJJ5_9DELT Length = 304 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 108/283 (38%), Gaps = 8/283 (2%) Query: 40 VYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQG 99 + + AA+ L ++ A+S + +LR F DPL + G G+ PTA A+ L E +++G Sbjct: 2 LVREGNVTRAARALGISQPAMSHRLARLRERFDDPLLLPSGAGMQPTARALQLVEPVARG 61 Query: 100 LESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQLLLRN-PPISD 155 L AL E +D + R TIA +VLP + P++ +R P + Sbjct: 62 LLEFDAALRSEARFDPRTSTRRFTIACADFGDFVVLPRALSRLHAEAPEIEVRMCRPGPE 121 Query: 156 AENQLSQFQTDLIIDNMFCTN-RTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAH 214 E L + D+ + C + + R +P + D +T H Sbjct: 122 LERGLERGLIDVAVLGNPCLPAANFRQRRVLDGRFATTVRADHPAVGPRMDLDTFVALPH 181 Query: 215 VLLLPEEQNF--SGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFS 272 + + P ++ + + + R++ + T L + SD++ P + Sbjct: 182 LAIAPSSESDFGGVIDDALARVGEARRVAVRVPSYSTAPLLASRSDLVLTAPVGVILEAA 241 Query: 273 RCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 L P L D + +++ R+P + + Sbjct: 242 SFVSLRVFD-PPLPIPPSDVRMVWHERWQREPGHAWLRTTLAE 283 >UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=Proteobacteria RepID=Q0BCW3_BURCM Length = 342 Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 118/289 (40%), Gaps = 9/289 (3%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY 95 F+A+Y H+ + AA L ++PSA+S ++ +LR D LF+R G + PT A + + Sbjct: 50 AFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGNEMQPTVRADDIATW 109 Query: 96 ISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPP 152 L+++ L +D RT A + VLP + I+ P+L +R Sbjct: 110 AGDALDTMSKGLARARRFDPAQSDRTFVFAASDYTAFAVLPALLARIERVAPRLRIRVVH 169 Query: 153 ISD--AENQLSQFQTDLIIDNMFC---TNRTVQHHVLFTDNMVLICREGNPLLSLEDDRE 207 + ++L+ + D + + ++ F+D+ V+I +P + + Sbjct: 170 SERKISIDELAAGRIDFALGYHEESTADSPGIEDFDWFSDDYVVIASAAHPDIRRRLTLD 229 Query: 208 TIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRF 267 A HV++ P ++ + + + RQ+ ++L +A S +L +P+R Sbjct: 230 QYLAARHVVVTPWNESRGVVDYVLDRLGLARQVAVRLPSVLAAPFAIAESTLLMTVPNRA 289 Query: 268 YNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 P+ P P + ++ + R + + +A Sbjct: 290 AQALRHAAPIRIFPAP-FEIPRYTVKVYSHAKHARTDAHRWIRAQLLDA 337 >UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=Shewanella RepID=A8H6N4_SHEPA Length = 305 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 73/299 (24%), Positives = 148/299 (49%), Gaps = 6/299 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + ++ DLNL IF AVY AA+ L+LT S++S +I +L++ + LFIR G+G Sbjct: 1 MSQQKSFDLNLFRIFTAVYRTSSFSRAAEELDLTQSSVSNAITRLKLAVGEELFIRVGRG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYD---KQRTITIATTPSVGALVLPVIYRAI 139 V PTA AM+L++ ++ + I +D +RT + + S L+ ++ + + Sbjct: 61 VKPTASAMNLYQQLASPVSEIEQVASSFELFDAKRSERTFYVYASESAILLLQGIVEQFL 120 Query: 140 KTHYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 + L+ R PP+ + + L + DL +D + + + + D +V + R+G+ Sbjct: 121 EELSINLVFREPPLIEEELQMDLQLEKVDLALDIWLPESSSFKSQKVMQDKLVCVARKGH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P +S +E N H++ N S +++ P R+++ +IL++ AL + S Sbjct: 181 PRISGAITQEQYFNEKHIIFKMRRDNLSVADLLTKQVLPARKMHSEQSSILSMMALASKS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 D LAI+ + + +++ + L+ P E I++ + ++ ++ + D++ A Sbjct: 241 DALAIVSKSYTDEYAQLFGLQVFELP-FAAEPIEYYMVWSHKLQQNRANIWLRDLLNQA 298 >UniRef50_B3YF82 Transcriptional regulator, LysR family n=2 Tax=Salmonella enterica subsp. enterica serovar Kentucky RepID=B3YF82_SALET Length = 306 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 114/281 (40%), Gaps = 7/281 (2%) Query: 39 AVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQ 98 + + + + ++L+ SA S ++ +LR F D L ++ GQ + T FA L E + Sbjct: 16 VLLAERNVTRTGERVHLSQSATSGALSRLREFFDDQLLVQVGQRMELTPFAEMLVEEVHD 75 Query: 99 GLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISD 155 + +D +D + RT + + + +V+ I+ P + L I D Sbjct: 76 IISKCEAIVDKNQKFDPETSTRTFRLNISDASATVVMNNAITLIQKQAPHVRLDISSIID 135 Query: 156 --AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAA 213 L+ DLI+ + LF D V + GNPL + + ++ Sbjct: 136 GPISEYLNIGVIDLIVTPTNLVSSQHPAEYLFDDQYVCVVWSGNPLCQSGINLDNYLSSG 195 Query: 214 HVLLLPEEQNFSGLRQRV-QEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFS 272 H++ + L + + R+I+ + + + ++++A + RF +S Sbjct: 196 HIVARFSKMIGWALDEVFISQSGYQRRIDIIVPSFSMLMTQLIGTNLIATVHERFARYYS 255 Query: 273 RCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + P+E P P ++E D + +++ D + + ++ Sbjct: 256 KYLPVEIFPCPIISEP-FDMKLQWHRHHDGDLGIQWLRQIL 295 >UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X2W7_COMTE Length = 302 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 108/276 (39%), Gaps = 7/276 (2%) Query: 43 HKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES 102 + I A + L+L+ A+S ++ +LR F D L +G+ + T A+ L E + + L Sbjct: 20 ERNISRAGERLHLSQPAMSNALARLRNFFGDELLASQGRQMVLTPRALGLIEPVREVLMR 79 Query: 103 ILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISD-AEN 158 I + +D RT + + A+ +P + A+ + L ++D Sbjct: 80 IDSTITTPPLFDPTESTRTFVLLLSDFTTAVFIPPLLEALYQQARGIGLELRSLNDKPAE 139 Query: 159 QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLL 218 QL Q DL+I LF + + + + + E HV+ Sbjct: 140 QLEQGDADLLIIPEQFAAVDHPRAPLFEEQYLCVTWANHSRIREELTFNDYLECGHVVAN 199 Query: 219 P-EEQNFSGLRQR-VQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP 276 Q + + +R++ ++ ++ + +V +D +A + R + P Sbjct: 200 YATGQQRAAFDGWFLDRFGINRKVEVSAPSMAALPQMVVGTDRIATVHRRLALQAEKVLP 259 Query: 277 LEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 ++ P P L + ++ +++ DP L + ++ Sbjct: 260 IKLWP-PPLEVPMLVQTLQWHRHRDADPALQWMREL 294 >UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IJ97_AZOC5 Length = 324 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 115/303 (37%), Gaps = 8/303 (2%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 +R D LL +F + AA+ L LT S +S ++++LR + DPLF R Sbjct: 1 MDIDLNHIRRFDGALLLVFRELMATGQTTAAARRLGLTQSTVSHALRRLRDLTGDPLFQR 60 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVI 135 + G+TPT A L + + L G +D R IA V ++ + Sbjct: 61 RPDGLTPTPRAHELLPIVVEMLRLSQALKGEPGEFDPAASTRHFRIAGPDIVSTVLAGPL 120 Query: 136 YRAIKTHYPQLLLR--NPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 H P L + A L + + D+ I + R L+ + V I Sbjct: 121 AHRFAQHAPNARLSFGFIVGAAALEALRRGEIDMAIGHFPSVPRGFAASTLWEEEFVAIA 180 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 R+G+P D A HVL+ + + + +Q + R++ + L++ Sbjct: 181 RKGHPRF-PPLDLAGYLAADHVLVSFSGRFTGVVDRVLQPLGLARRVVASFPLFLSVFDA 239 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 VA SD +A +P + + L +LP P + + + D + +I Sbjct: 240 VAQSDAVAAVPYSLCERHAETFGLARLPMP-IAVPGFPIVSV-RRAGVPDGGYEWLEALI 297 Query: 314 RNA 316 R Sbjct: 298 RRM 300 >UniRef50_A6GE91 Probable transcription regulator protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GE91_9DELT Length = 305 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 119/298 (39%), Gaps = 6/298 (2%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + +DLNLL A+ + + AA+ + ++ A+S ++++LR D L +R+G Sbjct: 1 MADIDALDLNLLKSLRALLDTRSVSRAAEAIGVSQPAMSAALRRLRAALGDELLLRQGHQ 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAI 139 + PTA+A L E ++ L + AL +D T+ I TT V ++ ++ A+ Sbjct: 61 MIPTAYAESLVEPLTDALGQLEVALFQRAGFDASSWATTLFILTTDDVIEVLGGPLHDAL 120 Query: 140 KTHYPQLLL--RNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGN 197 P + L R + QL + L I + ++ L+ D V + R + Sbjct: 121 AELAPGVTLAFRTLTSDYGKGQLQRGDAHLAITVDWTAPPELKRVRLYDDRFVSLVRADH 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 R A H+L+ P + + + + R I + + S Sbjct: 181 RFARRRPSRAAFARAEHLLVAPLGGTWGPVDDALADDGLGRAIRAVVPTFSSAPGYLVRS 240 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +++ +P F + L+ P + + + + ++ RDP + ++R Sbjct: 241 ELVCTLPRHFARAVAGVHGLKLFETP-VALAPLRYDLFWHPRFDRDPGHVWLRGLLRE 297 >UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A0KG94_AERHH Length = 318 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 65/302 (21%), Positives = 129/302 (42%), Gaps = 22/302 (7%) Query: 36 IFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEY 95 F+A+ + AA+ L ++ A+S ++ +LR F DPL +R QG+ PT A LH Sbjct: 14 AFDALMAQGSVTRAAETLFISQPAMSHALNRLRTFFGDPLLVRTPQGMLPTPRAQRLHLG 73 Query: 96 ISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPP 152 + Q L + L E ++ +R + TT V +++P + + +K P + + Sbjct: 74 VQQALRLLEQQLSDEEVFEPSQSKRRFVLCTTDYVECVLIPPLIQRLKRLAPAVTIEIRI 133 Query: 153 ISDA--ENQLSQFQTDLIIDNMFC--TNRTVQHHVLFTDNMVLICREGNPLL-------- 200 + D E +L+ + DL++ + T+ + + R P+ Sbjct: 134 LRDTLPEAELASGEIDLVLGFDEYMQVPGYLGKETWLTEPLAGLVRADLPMAAPALAESG 193 Query: 201 ------SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 + + HV P + + L + ++ + R I+ S + ++ AA+V Sbjct: 194 DEPAILAERISLAQLIEMPHVFHSPLGTSEASLDRYLKTLGFSRTISVNSQSYMSAAAIV 253 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + SD L ++PS L + WPL+ LP P + + ++ + P L + D+++ Sbjct: 254 SQSDHLLVLPSMVAELLASHWPLKSLPLPE-DVPDYHLNCVWHPVHAQQPALVWLKDLMK 312 Query: 315 NA 316 Sbjct: 313 EL 314 >UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=Burkholderiaceae RepID=B2JTT0_BURP8 Length = 324 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 65/318 (20%), Positives = 131/318 (41%), Gaps = 28/318 (8%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + IDLNLL +F+A++ + + A K L+L+ SAIS ++ ++R + D LF+R G+G+ Sbjct: 1 MSADRIDLNLLRVFDAIFEDRNLGLAGKRLHLSQSAISHALARMREVLGDDLFVRTGKGM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A+ + + L+ I AL +D QR +A + +L+L + + + Sbjct: 61 EPTMRALRMAAQVRGALQQIRAAL-GVDEFDPRVAQRKFVVAANDYITSLLLGRLSQRLH 119 Query: 141 THYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P + L P + D Q+ + D+ I ++ L+ V++ +P Sbjct: 120 AEAPLVDLVVRPSTRLDLAGQIDVGRIDMAIGIFADVPTRLRGTTLWEQTDVVLLHRDHP 179 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDR-------------------- 238 + R+ + + + + + + E R Sbjct: 180 IAGRAVTRDDMLAHPLIAISQGGEEEGAVGGFIVERGLARQSEMFNRDALNRAFDDPAET 239 Query: 239 -QINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYN 297 ++ + + L + AL+ +SDMLA++PS R L+ P + ++ Sbjct: 240 PRMRMSVAHSLALPALLRHSDMLALVPSSLGRELQRYGELKMCATPY-ACPDVAVRAVWH 298 Query: 298 KFSLRDPILHGVIDVIRN 315 + + DP L + + + Sbjct: 299 ERNDADPALQWLRQQLAD 316 >UniRef50_B1MJW3 Putative transcriptional regulator, LysR family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MJW3_MYCA9 Length = 295 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 114/294 (38%), Gaps = 9/294 (3%) Query: 29 IDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAF 88 +DLNLL + +A+ + AA+ L +P A+S+S+ +LR I D L +R GQG+ PT Sbjct: 1 MDLNLLRVLDALLQENSVTAAAERLATSPPAVSRSLGRLRRITGDALLVRAGQGLVPTPR 60 Query: 89 AMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQ 145 A+ + + + L L +D QRT + + + ++ P Sbjct: 61 AVQIRDELGGLLRRADQILRPGAEFDPGKLQRTFIVQAAELFLTALAVPLLERLRHDAPG 120 Query: 146 LLLRNPP-ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLED 204 + + P + L + D+ + ++ + +H + MV + + +PL Sbjct: 121 VNVVFAPEAREDTGALRRGDIDIELGSLDHLDPETRHTPVAMLPMVGVAAQDHPLFEGPI 180 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 D T H+ + + + + + + R++ + + L +S ++A+ Sbjct: 181 DAGTFATYGHISVSRRGKLYGPIDEALARHGLRRRVPVVVPSHTSAMLLARSSRLIALT- 239 Query: 265 SRFYNLF-SRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 + + P L + + ++ + D + ++ +F Sbjct: 240 --VAGSVDTAGLGIRMFDIP-LELPAVAVGVAWHPRNNDDAAHTWLRGLLIESF 290 >UniRef50_Q15XK7 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XK7_PSEA6 Length = 302 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 125/297 (42%), Gaps = 6/297 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +DLNLL + + + I +A+ L+L+ SA S + +LR F D L ++ G+ + Sbjct: 1 MRFEQLDLNLLVALDILIEEQNITRSAERLHLSQSATSGILSRLRAFFEDDLLVQIGKKM 60 Query: 84 TPTAFAMHLHEYISQGLESILGAL---DIEGSYDKQRTITIATTPSVGALVLPVIYRAIK 140 PT FA+ L ++ L ++ G++ +R I + V ++L + + Sbjct: 61 QPTPFALELQGPVAGVLATVRGSIIGKKANNPEHSERHFKIIASDYVIQVLLSHVVAEVA 120 Query: 141 THYPQLLLRN-PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P++ P + N LS+ D+++ L +D +V I N Sbjct: 121 KLAPKVTFEFLTPFAHEMNILSKGGADMMVAPEAIILSNYSSASLISDELVCIADINNTE 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRV-QEMFPDRQINFTSYNILTIAALVANSD 258 + E E + HV + + + Q + + +R+I + + T+ + N++ Sbjct: 181 VGDELTFEQFNAMGHVSVGFARVSLLSIEQWLINTLETNRKIAVITSDFSTMVYALLNTN 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 +AI+P F ++ + ++ + P + + S+ ++ DP+ + + I Sbjct: 241 RIAILPRHFVDMHIQREAVKTVKLP-FSPPNLKESLMWHPTLDNDPMHRWLREKIIE 296 >UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW61_ARTS2 Length = 295 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 126/296 (42%), Gaps = 8/296 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + ++DLNL+ F ++Y + + A + +T ++S ++ +LR DPLF R G+TP Sbjct: 1 MADLDLNLVKTFVSIYETRSLTQTAAEMCITQPSVSHALSRLRRQLGDPLFTRGAGGMTP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T A+ L L +I A+D +D RT + + LP + + + Sbjct: 61 TRVAVELFSTFKASLNAIDLAIDGTRDFDPTTSSRTFRLCLSDLGEMAFLPALMKRLLDS 120 Query: 143 YPQLLLRNPP--ISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLL 200 PQ++L P I L+ D I ++ ++ V+ ++ V + +G L Sbjct: 121 APQIVLEVVPMQIDKVSEWLAHGAVDAAIASVP-IGGAIRSRVIDQEHYVCVLPDGAGGL 179 Query: 201 SLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDML 260 + + HV++ P + + +R I ++ + ++A ++ Sbjct: 180 AEKMTLSQFTGMRHVVIDPS-AGHHLAEAEIAALGIERNIALRLHHFSVLPLVLAGQNLA 238 Query: 261 AIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 AI+PSR +F+ PL P N D S+++N + R L + + ++ Sbjct: 239 AIVPSRVARMFTEQAPLTIRELP-FNVPSFDVSLYWNGTAPRSRALRWFHETVADS 293 >UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cenocepacia RepID=B1K4K0_BURCC Length = 301 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 111/291 (38%), Gaps = 8/291 (2%) Query: 30 DLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFA 89 DLNLL F + + +V AAK L+L+ SA+S+++ ++R F DP+ IR G+ + PT A Sbjct: 10 DLNLLKAFSVLVAERSVVKAAKRLHLSESAMSRTLSRVRDAFGDPILIRAGRSLIPTPRA 69 Query: 90 MHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTHYPQL 146 + LH + L L D +T TI + + T P + Sbjct: 70 LSLHPRVLDMLAMAQDILTRAELVDPASLTQTFTIRCNEGFATEFGAKLLDIVTTAAPGV 129 Query: 147 LLRNPPISD-AENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS-LED 204 LR + L + + D+ + + + ++ L D V + +PL Sbjct: 130 HLRFAMQDEKDATALREDKADIEVGVLGKSGPEIRVQTLLRDRFVGVVAMSHPLAGHDPV 189 Query: 205 DRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIP 264 + HV + + + + + R++ T + AL ++A +P Sbjct: 190 SIDAYTRYPHVSVSRRGRRDGPIDALLSALGAKRRVATTVSSFPVALALAQGGSIVANVP 249 Query: 265 SRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 R S + P + E + S+ ++ DP + D + Sbjct: 250 FR--QTASGRIGMHTFELP-VQTEPVVVSMMWHPKVDPDPAHRWLRDCLLQ 297 >UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U796_MARAV Length = 303 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 119/297 (40%), Gaps = 10/297 (3%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + ++DL L F AV + AA L +T SA+S ++++LR F DPLF++ G Sbjct: 1 MKPVDMLSLDLRSLATFVAVLDEGSVSRAAVRLGVTQSAVSHTLERLRQAFGDPLFVKSG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQR---TITIATTPSVGALVLPVIYR 137 +G+ PT +A+ +I Q L+ + L ++ T TIA L+LP + R Sbjct: 61 RGIVPTDYALRTGPHIRQLLDDLR-TLPSGPPFEPASAEFTFTIAANDYQRDLLLPGLLR 119 Query: 138 AIKTHYPQLLLRNPPISDA-ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREG 196 ++ P + L+ P + L + DLII + L D MV+ Sbjct: 120 ILRQQAPGIRLQVIPSGIPNADMLRKEACDLIISPHAPETTDIMQRGLMADRMVVFYDPN 179 Query: 197 NPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVAN 256 + D A H+ L+ G + DR+ T N + + Sbjct: 180 --QRNAPTDLAEYLKADHIALMFATGERPGFENTLHAKGLDRRNVVTVANFSGLPEFLRG 237 Query: 257 SDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 +DMLA P R R + +P P + + + +++ DP V + + Sbjct: 238 TDMLATAPERMSAQLMRDF--AWVPLP-FDYKPFTLLMLWHRRHQNDPAHRWVRNQV 291 >UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae RepID=Q7MCZ8_VIBVY Length = 313 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 104/276 (37%), Gaps = 5/276 (1%) Query: 42 VHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLE 101 + AA L++T SA+S+ + +LR + DPL +R+G + T A L + Q L Sbjct: 18 EECHVSRAADRLHITQSAMSRQLAQLRELCSDPLLVREGNRLVATPHAEALRPKLVQLLS 77 Query: 102 SILGALD--IEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPIS-DAEN 158 D D Q + ++++ V ++P + R + P+L L + Sbjct: 78 EFEHLFDHQAFNPQDWQGQLVLSSSDYVAQFIVPTLSRVLIEQAPRLTLSYRLWQPQYLD 137 Query: 159 QLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSL-EDDRETIDNAAHVLL 217 L L + + + + + D V + R+G+PL E + +H+ + Sbjct: 138 SLLDTGIHLASTMLPSPPKELSYTKIGEDYSVCVMRQGHPLSGKAALSLEDMLRYSHIKV 197 Query: 218 LPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPL 277 S ++++ R I ++ SD + ++P ++ P+ Sbjct: 198 TGGGDKDSATDSVLRKLGKTRHIALQVPFFSAAVNVLIQSDYMMVVPEHIAVNLAKSQPI 257 Query: 278 EKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 P P + E + + ++ D V + + Sbjct: 258 CHYPLP-FDTEIHQYWLMWHPKYDHDSAHRWVREKV 292 >UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z947_9NEIS Length = 330 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 8/297 (2%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 LR +DLNLL F+A+ + + AA L L A+S ++ +LR + DPLF+R G + P Sbjct: 11 LRRLDLNLLVAFDALMQERHVSRAAARLFLGQPAMSHALARLRQLLDDPLFVRSGSRMEP 70 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A L + LE L ++D T +A + AL+ P + ++ Sbjct: 71 TPRACELAPQVRAWLEQAQQFLFRADAFDPAAAHATFRLAAPDGMEALLYPALIATLRRD 130 Query: 143 YPQLLLR--NPPISDAENQLSQFQTDLIIDNMF-CTNRTVQHHVLFTDNMVLICREGNPL 199 P + LR L + DL+I LF + + + Sbjct: 131 APGVRLRSQLLETDQQLAALDHDEVDLLITAAPLALRDWHSRLRLFKSDFISVHSRRQLP 190 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 L + + HV+ + +R++ S ++L I +VA + + Sbjct: 191 LPEPATLADLASCDHVVSSYRGTAAGVVDHLFAAHGLERRVQVLSASLLAIGHIVAQAPL 250 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 ++I P+ + LFS L P P +I + +++ + R P+ + D + A Sbjct: 251 MSIQPAIYRGLFSTTPELACAPLPGEA--RITVGLVWHRRNDRHPLHRYLRDTVIAA 305 >UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQN8_HALO1 Length = 302 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 120/298 (40%), Gaps = 5/298 (1%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 L +D+NLL +A+ + + AA + L+PSA+S+ + +LR +F D L +R G Sbjct: 4 MRNLHAVDMNLLVALDALLTTRSVTRAAGLAGLSPSAMSRVLGRLRDLFEDELLVRVGHE 63 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDK--QRTITIATTPSVGALVLPVIYRAIK 140 + PTA A + + L L + + +T+ T + LVLP + ++ Sbjct: 64 LLPTARAQQVQPRLRVLLRDTEQLLSPPATSASEFEGRLTVLLTEHLAKLVLPSLLVCVR 123 Query: 141 THYPQLLLRN-PPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 P+L L P E+ L Q L +D + + ++Q LF + + + R +PL Sbjct: 124 EEAPRLALDVRHPGPYPESALQQGDAVLWVDVTYEPDPSLQAVALFAEPYLSVVRCEHPL 183 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + + HV + S + ++ R + T + +A +V D Sbjct: 184 VGTPVGLDDWVAYPHVSVSVRGWGRSDVDIMLERAGRTRHVALTVHAFALVADVVVCGDY 243 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF 317 ++ +P+R + P + + +++ S DP + + F Sbjct: 244 VSTMPARLAQRLVDER--HTVLTPPIELPPLSIYACWHRRSDTDPRAAWIRQKVLELF 299 >UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales RepID=B7VQ45_VIBSL Length = 311 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 66/306 (21%), Positives = 114/306 (37%), Gaps = 16/306 (5%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 +L D+NLL + + + A+ L L+ SA+S+ + KLR +F DPLF R+ +G+ Sbjct: 5 KSLLKCDMNLLLCLHVLIEERSVSKTAERLFLSQSAVSKQLTKLRALFDDPLFERESKGL 64 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 PT A+ L I Q L I L + +D +RT TI + + P Sbjct: 65 FPTPKALALAPKIHQILLQIEK-LTVPEVFDPKDSERTFTIDLVETAYTAIYPHFMPTAL 123 Query: 141 THYPQLLLRNPPI-SDAENQLSQFQTDLIIDNMFC----------TNRTVQHHVLFTDNM 189 P + + + SD+ +L + + D I + + L D Sbjct: 124 ADAPHITINSSTWSSDSFKRLLKREVDFGIGIFELDERASTHVQCIPDELDYVELCLDYS 183 Query: 190 VLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 V + R +P L E + T H+ L+ L + + + +I + Sbjct: 184 VCLMRNDHPALQEEWNLGTFLKYRHIQLVTGGAGDWLLMEVLNSKQLEINKAANVSDITS 243 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 L SD+L P + L P P + ++K+ +P + Sbjct: 244 AIKLCKQSDLLMCYPYNSVRDYIDSGELVMKPVPVDLVPG-GLFLLWHKYFDSEPSHKWL 302 Query: 310 IDVIRN 315 D+I Sbjct: 303 RDLIIE 308 >UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhizobium sp. TAL1145 RepID=Q8KY13_9RHIZ Length = 320 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 8/297 (2%) Query: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 TL IDLNLL +F+ + + + AA T SAIS S+ +LR IF D LF+++ + Sbjct: 6 TLNQIDLNLLRVFDLLMQERSVTKAADRAGRTQSAISHSLNRLREIFGDELFVKRAGSMN 65 Query: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKT 141 PTA A L I+Q L I G + ++ R I T AL LP + + Sbjct: 66 PTAQARELATVITQALSDIEGVVSQRINFKPSESHRQFRIGVTDYTSALYLPTLLEEFNS 125 Query: 142 HYPQLLLRNPP--ISDAENQLSQFQTDLI-IDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 P LR P + +A LS D + I N + VL M+ GN Sbjct: 126 KAPNARLRIVPVYLYEAAELLSDPDLDCVLIGNPIIRESHIVETVLARHEMLCAAWSGNA 185 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 ++ E H+ + P+ + + + R++ T + ++ + Sbjct: 186 VIKD-LTMEKYLAMPHLQISPDGDESGVSDKALATIGLSRRVAATIPYYMVAPKVLRGTQ 244 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 M+A +L + + P L + S+ Y + D + IR+ Sbjct: 245 MIAAFADGMLSLIDESSEI-LVTRPPLALPDVRVSLIYVRTKQTDAGHIWLRSCIRS 300 >UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=A8FYY5_SHESH Length = 331 Score = 262 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 62/308 (20%), Positives = 127/308 (41%), Gaps = 13/308 (4%) Query: 18 GKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFI 77 G + L +DLNLL +F A+YVH+ + AA+ +NL+ SA S ++ +LRV D LFI Sbjct: 26 GMKIMHNRLHRLDLNLLKLFSALYVHRNVSVAAESMNLSQSAFSHALARLRVQLDDELFI 85 Query: 78 RKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSY---DKQRTITIATTPSVGALVLPV 134 R + PT +A +HE +++ L ++ + + + + A T L++P Sbjct: 86 RSRAQMIPTRYADSIHEPVAEVLSTLGSCFAPQTHFIPHESRHEFNFAVTDFTALLMMPR 145 Query: 135 IYRAIKTHYPQLLLRNPPISD--AENQLSQFQTDLIIDNMFCTN---RTVQHHVLFTDNM 189 + ++ H P + + S+ + D + + + + D Sbjct: 146 LMAHLERHAPLVRINLTSRSEKLPLAAFEAGELDFALGYSHFDEVQTPLINQWIWWEDCY 205 Query: 190 VLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILT 249 I + D +T + H+L+ P + + +++ + R I N++ Sbjct: 206 CTIASDK----LERMDLKTFLSRRHILVSPWGEKIGVVDEQLSKQGLQRDIALQLPNVMN 261 Query: 250 IAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGV 309 +VA S++L +P P+++ P ++ + K S P + Sbjct: 262 APFVVAGSELLLTLPKFAAQALQGALPVKRFDVP-VDMPTYQLKLFTYKPSENTPENLWM 320 Query: 310 IDVIRNAF 317 + +++ F Sbjct: 321 REQLQSLF 328 >UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=Vibrionales RepID=B7VQ63_VIBSL Length = 304 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 123/298 (41%), Gaps = 5/298 (1%) Query: 23 FTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQG 82 + + +DLNLL++F VY K I A++ L +T +S ++++L+ LFIR+G+G Sbjct: 1 MSDMEKLDLNLLSVFLEVYRLKSITLASESLGMTQPGVSGALKRLQAQLGTDLFIREGRG 60 Query: 83 VTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT--ITIATTPSVGALVLPVIYRAIK 140 +TPT AM L + L+ I A+ +D Q+ I + P++ + Sbjct: 61 ITPTNAAMQLALRVEPALDGITSAVSTLKQFDNQQHHVFRILVNEIGLTKLQPLVEKDDT 120 Query: 141 THYPQLLLRNPPI--SDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNP 198 + P D LS Q DL ID + + + D +VLI ++G+P Sbjct: 121 LGNISIEFNMVPSNEEDLLQSLSMQQADLAIDIHYPQVNGYMNQQVIEDELVLIAKKGHP 180 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 + + H+ + + R+++ +++T+ LV+ SD Sbjct: 181 RIDGSVTEAQYYHEKHITFRMRRSHLYTADYFTKNPIQQRKVSSECDSLMTMCVLVSGSD 240 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 + F N F+ + L+ L P + + ++K + + + I+ Sbjct: 241 CVGSTSRGFANQFAERFQLQVLEQP-FEVLPMKQYMIWHKRTDLNTAHQWLRTKIQQH 297 >UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8IVY8_METNO Length = 341 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 132/327 (40%), Gaps = 26/327 (7%) Query: 15 SSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDP 74 + G + L +DLNL+ +F+AV + + A + L L+ SA+S +++LR + D Sbjct: 1 MTRGAGTRASILNRLDLNLIRLFDAVMRERHVARAGQSLGLSQSAVSHGLRRLRTLIGDD 60 Query: 75 LFIRKGQGVTPTAFAMHLHEYISQGLESILGALDI--EGSYDKQRTITIATTPSVGALVL 132 LF+R QG+ PT A+ + + L +I GA+ R +A T + A+V Sbjct: 61 LFVRTVQGMEPTPRALAMAVQVRDALTAIEGAIGPQRFDPASSTRQFRLAATDHITAVVA 120 Query: 133 PVIYRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMV 190 P + R +T P + P + D Q+ Q D+++ + LF D V Sbjct: 121 PALMRTFETEAPLASILIRPATRIDLTMQVDLGQIDIVVGIFSQIPHRLHARTLFEDRDV 180 Query: 191 LICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDR------------ 238 L+ +P D T+ +++ R+ E R Sbjct: 181 LVTAPDHPEAGGATDIRTLARDPLMVVTVGGTEDGLPDGRLSERGLTRQTEMFDRDALNR 240 Query: 239 ---------QINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQ 289 +++ + L + +L+A+S +AI+P+ + F + ++ P Sbjct: 241 AFRAAGLVPRLSVLQPHFLAVPSLLADSRRVAIVPASLAHGF-EAAGVARVSMPPWEPRT 299 Query: 290 IDFSIHYNKFSLRDPILHGVIDVIRNA 316 + + +++ +DP + + + A Sbjct: 300 MAVQMVWHERWRQDPAHAWLREALFRA 326 >UniRef50_C4V039 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C4V039_YERRO Length = 337 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 118/300 (39%), Gaps = 6/300 (2%) Query: 20 PQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRK 79 IDLNLLT+ ++ + AA+ L+L A+S ++ +LR++F DPLF+R Sbjct: 7 NIRENDFSRIDLNLLTVLLVLHREGSVTRAAERLHLGQPAVSGALARLRIMFNDPLFVRS 66 Query: 80 GQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIY 136 +G+ PT A L + +E + L +++ T + + V ++P + Sbjct: 67 AKGMAPTPRAETLIASLLPMMEQMKQVLFQPPTFNPATDAHTFRLGMSDWVERWLMPGLL 126 Query: 137 RAIKTHYPQLLLRNPPISDA--ENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICR 194 + P + L+ E + + D+ I + + + Sbjct: 127 ATLAREAPGIQLQMMASDPFLDEELVQLDKVDVAISVGQGIPAGMIREPVVRMGFCTLWH 186 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 L+ E H+L+ + S + +++ R++ + + + ++ ++ Sbjct: 187 PLQLALTSPLSLEEYIAHDHLLVSYRGASHSQIDEQLARKNLTRRVRYVTPHFSSLPLML 246 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 L +P+ + + + L + P ++ S+ ++ DP L +++ +R Sbjct: 247 KQIPALTTVPAGLASGWVEHYGLSRSAVP-VSAPAFTLSLMWSTRRSHDPALLWLLEKLR 305 >UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=Klebsiella RepID=B5XRQ2_KLEP3 Length = 307 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 117/303 (38%), Gaps = 6/303 (1%) Query: 19 KPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIR 78 K I IDLNLLT+ +Y + A+VL+L AIS ++++LR +F DPLF+R Sbjct: 2 KKIIENDFSRIDLNLLTVLMVLYREASVTRTAEVLHLGQPAISGALKRLREMFDDPLFVR 61 Query: 79 KGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVI 135 +G+ PT A L + +E++ A+ G + R I + ++P + Sbjct: 62 SARGMLPTPRAQALMTDLQPLMENLHSAMFGAGEFVPARAQQLFRIGLSDWSEHWLMPQL 121 Query: 136 YRAIKTHYPQLLLRNPPIS--DAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLIC 193 + P + L++ L + + D+ + + V + T + + Sbjct: 122 LPGLMQEAPGVSLQSIAADPFQVRQLLEEERIDVAVSVNKQSRGEVVSEPVMTMGVTTLW 181 Query: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 HV++ E + +++ R++ F + N T L Sbjct: 182 SPQQIPCRGPLSVSDFVAWEHVMVAYRETGHGEIDRQLASQGLARRVRFATQNFSTFPLL 241 Query: 254 VANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVI 313 + + A +P + L P + + I +K +DP L+ ++ + Sbjct: 242 LTTLPLFATVPQGLAQRWQAQHALRA-DAPPVTYPEFTLCILRHKRRAQDPALNWLVTKL 300 Query: 314 RNA 316 + A Sbjct: 301 KQA 303 >UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V5Q0_PSEA7 Length = 308 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 114/301 (37%), Gaps = 8/301 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + IDLNLL F + + AA VL++T A+S ++++LR F D LFIR Sbjct: 4 INVRNIARIDLNLLLTFHCLMSERSATRAAVVLHVTQGAVSAALRRLREHFGDELFIRSA 63 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRT---ITIATTPSVGALVLPVIYR 137 G+ PT AM L I++ L SI G L E + + IA + + + + P I Sbjct: 64 SGMQPTRKAMELAPRIAEALTSISGVLAAEPEFSPHDSSYVFNIALSDDIESYLAPCIVN 123 Query: 138 AIKTHYPQLLLRNPPISDAE--NQLSQFQTDLIIDNMF-CTNRTVQHHVLFTDNMVLICR 194 A + + + L DL+I + N + VLF+ + + R Sbjct: 124 AAAAEGLGVSFAFHQSNSSLWKQSLLDPDMDLVICSEPKDFNTSYSSQVLFSSSYSCLFR 183 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 + + A HV + + + + + R++ + + + + Sbjct: 184 PRGSMAGAAIGLDDYFAANHVRISYDGR-RGFIDDLFESAGYARRVTASFTHFAGALSTL 242 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + +++A +P+ +SR L P P L + ++ + + Sbjct: 243 MSGEVIATLPTFAAETYSRMMDLHCCPVP-LPVPSFRCFMVWDVAKHNKTHHDWLRRFVG 301 Query: 315 N 315 Sbjct: 302 E 302 >UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H854_SHEPA Length = 303 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 136/298 (45%), Gaps = 10/298 (3%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 + +DLNLL +F + K AA++L+L+ A+S+++++LR F D LF+R G+ P Sbjct: 1 MSQLDLNLLKVFRVLIEVKNTRKAAEILHLSQPAVSRALRRLRDYFGDELFVRSAHGLEP 60 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDKQ---RTITIATTPSVGALVLPVIYRAIKTH 142 T+ A+ + + + ++ + AL+++ ++ Q +TIA + ++P + +A+ Sbjct: 61 TSKALVIGSRLPEAMDQLFEALNVKEEFEPQFYSGKVTIAVNGFIAHWLVPPLIKALTEK 120 Query: 143 YPQLLLRNPPISDAENQ-LSQFQTDLIIDNMF-CTNRTVQHHVLFTDNMVLICREGNPLL 200 P + + ++ + + + L I+ + + L +D+ V++CR+ +P Sbjct: 121 APNMEIYMANWEESTSDKIINGEIQLAINYFPLELTKQLIQEKLGSDDFVVLCRKDHPFQ 180 Query: 201 SLEDDRETIDNAA---HVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 E H+ + + + + ++++ ++ +S + I + + + Sbjct: 181 KEVIGAEDFPKYPLASHI-VPGWNETKNFTVEALKKLGYKPRVQLSSSKMNIILSSLELT 239 Query: 258 DMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN 315 DML S + + + P L + DF++ Y S R+P+ + + + Sbjct: 240 DMLLPCSKLLAKTLSDRFRIIDID-PELEQPSSDFALIYANKSRRNPLDEWLQQCVID 296 >UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=C5A8T0_BURGB Length = 313 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 121/303 (39%), Gaps = 9/303 (2%) Query: 21 QIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKG 80 + ++DLNLL +FE ++ G AA L+LT SA+S ++++LR ++ DPLF+R G Sbjct: 1 MNAMNIADVDLNLLKVFEVLFDEGGASRAAIRLDLTQSAVSAALRRLRALYGDPLFVRTG 60 Query: 81 QGVTPTAFAMHLHEYISQGLESILGALD----IEGSYDKQRTITIATTPSVGALVLPVIY 136 +G+ PTA A L I + L+ +L S++ R +++A + + Sbjct: 61 RGLAPTARARELKPLIGEALDRCRQSLAFGAPAPASFE-GRAVSVAMSDDFEIAFGGRLI 119 Query: 137 RAIKTHYPQLL--LRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICR 194 P L R + L+ + DL I R + H L + Sbjct: 120 ECAARLAPGLRVIFRQTHSQIVGDALANREVDLAIAAGGFATRGLGHMALGHGRYACLVD 179 Query: 195 EGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALV 254 L + HVL+ + + + E+ R + ++ + + L+ Sbjct: 180 PAAAPGRLVLTLDDFLAREHVLVSSGG-VVGIVDEALAEIGRRRTVRASTTHFAALPFLL 238 Query: 255 ANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 + +A IP +R L + P L ++ + +LRD + + I Sbjct: 239 RGTPAVATIPHHAAEALARMTGLGLVACP-LAMPAYPVALGWRVSTLRDAAVAKLRQAIV 297 Query: 315 NAF 317 ++F Sbjct: 298 DSF 300 >UniRef50_A3VA58 Transcriptional regulatory protein n=2 Tax=cellular organisms RepID=A3VA58_9RHOB Length = 310 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 122/293 (41%), Gaps = 5/293 (1%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + +DLNLL + + H+ + AA + ++ SA+S ++ +LR F DPL ++ G+ + Sbjct: 1 MRFKKLDLNLLVALDHMLEHRSVTEAAGRMFMSQSAMSNALTRLRTYFDDPLLVQVGRRM 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 T A L I L + A+D ++ RT + + +++P ++R Sbjct: 61 ELTPRAEALRPAIRDVLVRVEAAIDRGPQFEPDQSDRTFNLLLSDYSLRVLMPTMFRLAD 120 Query: 141 THYPQLLLRNPPISDAE-NQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPL 199 + A NQ+ + + DL+I + +L+ D V++ Sbjct: 121 DQNATVRFNLRAQEIAPYNQIERGEVDLLIAPEPFVSPDHPSTLLYEDRYVVVAWAKGKY 180 Query: 200 LSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDM 259 + D + A HV+++P +Q + + + R++ T+++ ++ L+ ++ Sbjct: 181 GTGPMDSRAYEAAGHVVMVPPQQAQTVDGRLIAGGGLTRRVEATTFSFASLPYLITGTNR 240 Query: 260 LAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDV 312 +A + R L L P + + I ++ DP L + D+ Sbjct: 241 IATVHGRLAALMMNEADLVSYSLP-VEAPPLRQMIQWHMLRDGDPGLSWLRDL 292 >UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SH82_AERS4 Length = 324 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 121/299 (40%), Gaps = 12/299 (4%) Query: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 L +DLNLLT+F+ + + + AA+ L+L+ S +S ++ +LR DPLF+ + + P Sbjct: 5 LSRLDLNLLTVFDMLMQERNVTRAAERLHLSQSTVSHALGRLRQALDDPLFVMSRREMMP 64 Query: 86 TAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIKTH 142 T A L + Q L + L +D +R IAT SV ++P + + Sbjct: 65 TERAKTLAGPVRQALAMLEQGLRQAEGFDPASARRIFRIATPGSVEHGLVPALVEQLHRQ 124 Query: 143 YPQLLLRNPPI--SDAENQLSQFQTDLIIDNMF--CTNRTVQHHVLFTDNMVLICREGNP 198 P L + SD E +L + + DL+I + + F + +V + G+ Sbjct: 125 APHCRLEVCELADSDYERELEKGELDLVIGFADANHFSPRLWREPWFNNPLVCLSPLGSE 184 Query: 199 LLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSD 258 L + + H+ + + + + +R++ + + + L+A Sbjct: 185 L-PEVLGPAELVSRPHIHTSSWGHSQAMVDLWLARFGVERELGVRLPSFMAVPPLMATGR 243 Query: 259 MLAIIPSRFYNLFSRCWPLEKLPF-PSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNA 316 L ++P F R +PL P + I + + + + D + ++ Sbjct: 244 YLVVVPEMIGRHFCRYYPLRLHQLNPEI---PIVYLMAGHPLTAHDQAIGWFKGLLHRL 299 >UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=Proteobacteria RepID=Q0JY95_RALEH Length = 318 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 115/298 (38%), Gaps = 8/298 (2%) Query: 24 TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGV 83 + + DLNLL +F +Y AA + L+ A+S + +LR DPLF+R +G+ Sbjct: 1 MNIGSKDLNLLYVFHVLYQEGNASRAAARMALSQPALSHKLNRLRDELGDPLFVRAPRGL 60 Query: 84 TPTAFAMHLHEYISQGLESILGALDIEGSYDK---QRTITIATTPSVGALVLPVIYRAIK 140 TPT A L + + + + D +D + I TT + L+LP + ++ Sbjct: 61 TPTPRAHALAPQVQRLVGDLDAFYDACAGHDYLARSEHLHIYTTDYMEQLLLPALLPRLR 120 Query: 141 THYPQLLLRNPPISD--AENQLSQFQTDLII-DNMFCTNRTVQHHVLFTDNMVLICREGN 197 + P ++L +L + DL I T L +++ V++ N Sbjct: 121 SQAPGVVLVTHNTRGELPREELEKGTCDLAIAGFYENLPDTFHQQRLCSEDFVVLASRAN 180 Query: 198 PLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANS 257 P ++ D + H+L + + + R++ + L + LV + Sbjct: 181 PRIADGLDLDAFLACEHLLTTLTGDLNGVVDRALARQGHKRRVVAGLSSFLAPSRLVRGT 240 Query: 258 DMLAIIPSRFY-NLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIR 314 ++L +R L LP P +D ++ + D + + I+ Sbjct: 241 ELLLTCLRSVAEEAVARDPDLVLLPVP-FALPHVDMMQIWHARTDADRLRRWLRQQIQ 297 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.192 0.611 Lambda K H 0.267 0.0585 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,380,623,251 Number of Sequences: 3077464 Number of extensions: 135535128 Number of successful extensions: 410899 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 16192 Number of HSP's successfully gapped in prelim test: 1475 Number of HSP's that attempted gapping in prelim test: 368741 Number of HSP's gapped (non-prelim): 18411 length of query: 317 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 189 effective length of database: 646,480,964 effective search space: 122184902196 effective search space used: 122184902196 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 94 (40.3 bits)