BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (411 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Ta... 860 0.0 UniRef50_C6DJ77 Integrase family protein n=4 Tax=Enterobacteriac... 393 e-108 UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damsel... 331 3e-89 UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter c... 330 5e-89 UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Provide... 309 2e-82 UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteria... 308 2e-82 UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH 307 5e-82 UniRef50_P76168 Putative lambdoid prophage Qin defective integra... 305 2e-81 UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio ... 301 3e-80 UniRef50_B0KSD4 Integrase family protein n=1 Tax=Pseudomonas put... 201 5e-50 UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID... 195 3e-48 UniRef50_Q1QXU7 Phage integrase n=4 Tax=root RepID=Q1QXU7_CHRSD 179 1e-43 UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobact... 173 1e-41 UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8H... 169 2e-40 UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis... 167 5e-40 UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria muco... 167 9e-40 UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp... 155 2e-36 UniRef50_D0J3Y8 Phage integrase n=5 Tax=Burkholderiales RepID=D0... 150 1e-34 UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenic... 149 2e-34 UniRef50_C4TVA5 Bacteriophage integrase n=3 Tax=Enterobacteriace... 140 8e-32 UniRef50_A4WAT6 Putative uncharacterized protein n=1 Tax=Enterob... 137 8e-31 UniRef50_A7N7U1 Putative uncharacterized protein n=1 Tax=Vibrio ... 134 7e-30 UniRef50_B0VUJ0 Putative integrase n=1 Tax=Acinetobacter baumann... 132 2e-29 UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobac... 131 4e-29 UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria R... 124 4e-27 UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaprot... 124 5e-27 UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae ... 124 6e-27 UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanell... 122 2e-26 UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1Z... 122 3e-26 UniRef50_Q2T7M7 Bbp50 n=13 Tax=root RepID=Q2T7M7_BURTA 120 6e-26 UniRef50_B1J5J4 Integrase family protein n=4 Tax=Pseudomonas Rep... 120 8e-26 UniRef50_A1TPL3 Phage integrase family protein n=1 Tax=Acidovora... 119 2e-25 UniRef50_Q7N1I7 Similar to bacteriophage integrase n=8 Tax=Enter... 116 1e-24 UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales... 116 2e-24 UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 R... 115 3e-24 UniRef50_A8ZS80 Integrase family protein n=1 Tax=Desulfococcus o... 111 4e-23 UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovi... 110 9e-23 UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q1... 107 9e-22 UniRef50_A8FW51 Putative pore-forming cytotoxin integrase n=1 Ta... 107 1e-21 UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auens... 107 1e-21 UniRef50_Q87MU5 Putative pore-forming cytotoxin integrase n=2 Ta... 107 1e-21 UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crun... 105 3e-21 UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degen... 105 4e-21 UniRef50_C3K9Z5 Putative phage integrase n=1 Tax=Pseudomonas flu... 104 5e-21 UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6G... 102 3e-20 UniRef50_D1B215 Integrase family protein n=1 Tax=Sulfurospirillu... 100 7e-20 UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovi... 97 1e-18 UniRef50_Q30S15 Phage integrase n=2 Tax=Campylobacterales RepID=... 96 3e-18 UniRef50_C0VGS2 Phage integrase n=2 Tax=Acinetobacter RepID=C0VG... 96 3e-18 UniRef50_D0S8U2 Phage integrase n=1 Tax=Acinetobacter johnsonii ... 96 4e-18 UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellul... 94 8e-18 UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilu... 94 1e-17 UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostri... 93 1e-17 UniRef50_Q17VL1 Bacteriophage-related integrase n=4 Tax=Helicoba... 92 5e-17 UniRef50_B4RWG8 Phage integrase n=1 Tax=Alteromonas macleodii 'D... 91 7e-17 UniRef50_B7WQQ6 Integrase family protein n=1 Tax=Comamonas testo... 91 8e-17 UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum t... 91 1e-16 UniRef50_Q30RZ4 Phage integrase n=1 Tax=Sulfurimonas denitrifica... 90 1e-16 UniRef50_Q2T3Q9 Bacteriophage integrase family protein n=5 Tax=P... 89 3e-16 UniRef50_B8F9V7 Integrase family protein n=1 Tax=Desulfatibacill... 88 7e-16 UniRef50_C3EB65 DNA integration/recombination/invertion protein ... 88 7e-16 UniRef50_D1B4J0 Integrase family protein n=1 Tax=Sulfurospirillu... 88 7e-16 UniRef50_A3D3X0 Phage integrase family protein n=1 Tax=Shewanell... 87 8e-16 UniRef50_B2JUB3 Integrase family protein n=2 Tax=Burkholderiales... 87 9e-16 UniRef50_A7H224 Phage integrase n=4 Tax=Campylobacter RepID=A7H2... 87 9e-16 UniRef50_B0UFZ7 Integrase family protein n=3 Tax=Methylobacteriu... 87 1e-15 UniRef50_C6UV22 Site-specific recombinase, phage integrase famil... 87 2e-15 UniRef50_A7GY77 ATP synthase C chain (Lipid-binding protein)(Dic... 86 2e-15 UniRef50_B7WRL6 Bbp50 n=1 Tax=Comamonas testosteroni KF-1 RepID=... 86 3e-15 UniRef50_C0QBZ6 Predicted bacteriophage P4 integrase n=1 Tax=Des... 84 7e-15 UniRef50_Q4FUG6 Possible phage integrase n=1 Tax=Psychrobacter a... 84 8e-15 UniRef50_UPI000169495E prophage LambdaBa04, site-specific recomb... 84 8e-15 UniRef50_O55248 Integrase n=4 Tax=root RepID=O55248_9VIRU 84 1e-14 UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp.... 84 1e-14 UniRef50_Q4HNR8 Site-specific recombinase, phage integrase famil... 83 2e-14 UniRef50_C8PFF6 Putative phage integrase n=1 Tax=Campylobacter g... 83 2e-14 UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5... 82 3e-14 UniRef50_A6NY15 Putative uncharacterized protein n=1 Tax=Bactero... 82 3e-14 UniRef50_B2UXR9 Phage integrase n=3 Tax=Clostridium RepID=B2UXR9... 82 3e-14 UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodo... 82 4e-14 UniRef50_B6FRP3 Putative uncharacterized protein n=4 Tax=Bacteri... 81 6e-14 UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostrid... 81 8e-14 UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, ... 80 1e-13 UniRef50_A4ILC8 DNA integration/recombination/invertion protein ... 80 1e-13 UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostri... 80 2e-13 UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovi... 80 2e-13 UniRef50_UPI0001873836 hypothetical protein PSPTOT1_3787 n=1 Tax... 79 2e-13 UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces gr... 79 2e-13 UniRef50_D1B1M5 Integrase family protein n=2 Tax=Sulfurospirillu... 79 2e-13 UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36... 79 3e-13 UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus Rep... 79 4e-13 UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridi... 78 5e-13 UniRef50_B6FTU6 Putative uncharacterized protein n=1 Tax=Clostri... 78 6e-13 UniRef50_B6BNI8 Phage integrase n=1 Tax=Campylobacterales bacter... 78 7e-13 UniRef50_D1RC05 Putative uncharacterized protein n=1 Tax=Parachl... 77 1e-12 UniRef50_Q6ALN4 Related to pore-forming cytotoxin integrase n=1 ... 77 1e-12 UniRef50_C0ZXC2 Putative integrase n=1 Tax=Rhodococcus erythropo... 76 2e-12 UniRef50_A5TWD8 Possible integrase n=3 Tax=Fusobacterium RepID=A... 76 2e-12 UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degen... 76 2e-12 UniRef50_A6Q245 Site-specific recombinase, phage integrase famil... 76 2e-12 UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5... 76 3e-12 UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillu... 76 3e-12 UniRef50_A1HTM7 Phage integrase family protein n=1 Tax=Thermosin... 76 3e-12 UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_... 76 3e-12 UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum th... 75 3e-12 UniRef50_C6J9M1 Putative uncharacterized protein n=1 Tax=Ruminoc... 75 3e-12 UniRef50_C5UVC6 Site-specific recombinase, phage integrase famil... 75 4e-12 UniRef50_A8RK44 Putative uncharacterized protein n=1 Tax=Clostri... 75 4e-12 UniRef50_Q3IEL8 Putative phage integrase n=1 Tax=Pseudoalteromon... 75 5e-12 UniRef50_A6TLJ2 Phage integrase family protein n=1 Tax=Alkaliphi... 75 5e-12 UniRef50_A6GBT9 Phage integrase n=2 Tax=Plesiocystis pacifica SI... 74 7e-12 UniRef50_A4XLL4 Phage integrase family protein n=1 Tax=Caldicell... 74 9e-12 UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillu... 74 1e-11 UniRef50_C5WEI1 Site-specific recombinase, phage integrase famil... 74 1e-11 UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostri... 74 1e-11 UniRef50_D1SSC0 Putative uncharacterized protein n=1 Tax=Acidovo... 73 1e-11 UniRef50_C5UUP0 Phage integrase n=1 Tax=Clostridium botulinum E1... 72 3e-11 UniRef50_B0PE10 Putative uncharacterized protein n=1 Tax=Anaerot... 72 3e-11 UniRef50_C2YK72 Phage integrase n=3 Tax=Bacillus cereus group Re... 72 3e-11 UniRef50_C2DBH8 Phage integrase family site specific recombinase... 72 4e-11 UniRef50_A6P1V8 Putative uncharacterized protein n=2 Tax=Bactero... 72 5e-11 UniRef50_A4J1T6 Phage integrase family protein n=1 Tax=Desulfoto... 72 5e-11 UniRef50_C2F0I9 Transposon integrase n=3 Tax=Firmicutes RepID=C2... 71 6e-11 UniRef50_UPI0001BC466B phage integrase family protein n=1 Tax=Fu... 71 7e-11 UniRef50_C7D286 Phage integrase n=3 Tax=Enterococcus faecalis Re... 71 7e-11 UniRef50_D2BJR0 Site-specific recombinase, phage integrase famil... 71 7e-11 UniRef50_D0XDY6 Putative uncharacterized protein n=1 Tax=Vibrio ... 71 8e-11 UniRef50_A5ZQX5 Putative uncharacterized protein n=1 Tax=Ruminoc... 71 8e-11 UniRef50_C8VWS4 Integrase family protein n=1 Tax=Desulfotomaculu... 71 9e-11 UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella mul... 71 9e-11 UniRef50_B5E8A2 Integrase family protein n=1 Tax=Geobacter bemid... 71 9e-11 UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum th... 70 1e-10 UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostri... 70 1e-10 UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaeroc... 70 1e-10 UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum t... 70 1e-10 UniRef50_UPI0001BCCDB9 integrase family protein n=1 Tax=Selenomo... 70 1e-10 UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum th... 70 1e-10 UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteri... 70 1e-10 UniRef50_A7WY94 Integrase homolog n=25 Tax=Firmicutes RepID=A7WY... 70 1e-10 UniRef50_A7HZQ7 Bacteriophage-related integrase n=3 Tax=Campylob... 70 2e-10 UniRef50_UPI0001C31A42 integrase family protein n=2 Tax=Conexiba... 70 2e-10 UniRef50_A0AGT2 Complete genome n=7 Tax=Bacilli RepID=A0AGT2_LISW6 70 2e-10 UniRef50_C0X7V2 Integrase family protein n=1 Tax=Enterococcus fa... 70 2e-10 UniRef50_C3WEM5 DNA integration/recombination/invertion protein ... 70 2e-10 UniRef50_A8RCT4 Putative uncharacterized protein n=1 Tax=Eubacte... 70 2e-10 UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-r... 70 2e-10 UniRef50_A2V4W2 Phage integrase n=5 Tax=Gammaproteobacteria RepI... 69 2e-10 UniRef50_B8DWT8 Phage integrase n=4 Tax=Bifidobacterium animalis... 69 3e-10 UniRef50_Q1CPK0 DNA integration/recombination/inversion protein ... 69 3e-10 UniRef50_Q1CP24 DNA integration/recombination/inversion protein ... 69 3e-10 UniRef50_Q4KFM1 Integrase n=1 Tax=Pseudomonas fluorescens Pf-5 R... 69 3e-10 UniRef50_C0W4G9 Phage integrase family protein n=1 Tax=Actinomyc... 69 3e-10 UniRef50_Q1D2W1 Site-specific recombinase, phage integrase famil... 69 3e-10 UniRef50_Q30SF2 Phage integrase n=2 Tax=Campylobacterales RepID=... 69 4e-10 UniRef50_B0TI08 Phage integrase family protein n=14 Tax=root Rep... 69 4e-10 UniRef50_Q636X3 Phage integrase n=18 Tax=Bacillales RepID=Q636X3... 68 5e-10 UniRef50_D0IYY1 Phage integrase n=1 Tax=Comamonas testosteroni C... 68 5e-10 UniRef50_B6WRS3 Putative uncharacterized protein n=2 Tax=Desulfo... 68 6e-10 UniRef50_A7VZ12 Putative uncharacterized protein n=2 Tax=Clostri... 67 8e-10 UniRef50_B7GTX3 Phage integrase family protein n=1 Tax=Bifidobac... 67 8e-10 UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiotherm... 67 8e-10 UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobac... 67 9e-10 UniRef50_Q18AU2 Integrase n=52 Tax=Bacteria RepID=Q18AU2_CLOD6 67 9e-10 UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK... 67 9e-10 UniRef50_C4ZDW8 Integrase n=34 Tax=Bacteria RepID=C4ZDW8_EUBR3 67 9e-10 UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilu... 67 1e-09 UniRef50_C0C1S7 Putative uncharacterized protein n=1 Tax=Clostri... 67 1e-09 UniRef50_Q2IFG9 Phage integrase n=2 Tax=Cystobacterineae RepID=Q... 67 1e-09 UniRef50_A0PLK9 Prophage integrase n=4 Tax=Mycobacterium RepID=A... 67 1e-09 UniRef50_B3XMH5 Integrase family protein n=2 Tax=Lactobacillus R... 67 2e-09 UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rh... 67 2e-09 UniRef50_C1B977 Putative integrase n=2 Tax=Nocardiaceae RepID=C1... 67 2e-09 UniRef50_D1VST0 Phage integrase n=1 Tax=Peptoniphilus lacrimalis... 67 2e-09 UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53... 66 2e-09 UniRef50_B5GE73 TraSA:integrase fusion protein n=1 Tax=Streptomy... 66 2e-09 UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase famil... 66 2e-09 UniRef50_C9AMW3 Phage integrase n=8 Tax=Enterococcus faecium Rep... 66 2e-09 UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium R... 65 3e-09 UniRef50_C0Z4G0 Putative uncharacterized protein n=1 Tax=Breviba... 65 3e-09 UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus... 65 3e-09 UniRef50_C4ZBA5 Phage integrase family protein n=10 Tax=Firmicut... 65 4e-09 UniRef50_C8WP09 Integrase family protein n=1 Tax=Eggerthella len... 65 4e-09 UniRef50_A7VVX9 Putative uncharacterized protein n=2 Tax=Clostri... 65 4e-09 UniRef50_A4U1Z2 Phage integrase n=4 Tax=Alphaproteobacteria RepI... 65 5e-09 UniRef50_UPI0001C4265E tyrosine recombinase xerC-like protein n=... 65 5e-09 UniRef50_C2EIM6 Phage integrase n=1 Tax=Lactobacillus salivarius... 65 5e-09 UniRef50_D0DGR8 Integrase n=1 Tax=Lactobacillus crispatus MV-3A-... 65 6e-09 UniRef50_C0KTD3 Integrase (Fragment) n=7 Tax=Bacteria RepID=C0KT... 65 6e-09 UniRef50_Q65KE0 Lambda integrase-like, N-terminal,DNA breaking-r... 65 6e-09 UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integra... 65 6e-09 UniRef50_C2RY84 Prophage LambdaBa04, site-specific recombinase, ... 65 6e-09 UniRef50_A6QA80 Site-specific recombinase, phage integrase famil... 65 7e-09 UniRef50_B2TP23 Prophage LambdaBa04, site-specific recombinase, ... 64 7e-09 UniRef50_Q0FT82 Phage integrase n=1 Tax=Roseovarius sp. HTCC2601... 64 8e-09 UniRef50_C7GI02 Site-specific recombinase, phage integrase famil... 64 8e-09 UniRef50_Q03L48 Integrase n=30 Tax=Streptococcus RepID=Q03L48_STRTD 64 9e-09 UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, ... 64 1e-08 UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF... 64 1e-08 UniRef50_D1BL69 Integrase family protein n=1 Tax=Veillonella par... 64 1e-08 UniRef50_A7B6B9 Putative uncharacterized protein n=2 Tax=Clostri... 64 2e-08 UniRef50_B5CPJ9 Putative uncharacterized protein n=1 Tax=Ruminoc... 63 2e-08 UniRef50_UPI0001C3748B integrase family protein n=1 Tax=Ruminoco... 63 2e-08 UniRef50_C3XGP1 Phage integrase n=1 Tax=Helicobacter bilis ATCC ... 63 2e-08 UniRef50_B7IY65 DNA integration/recombination/invertion protein ... 63 2e-08 UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridi... 63 2e-08 UniRef50_Q3Z840 Site-specific recombinase, phage integrase famil... 63 2e-08 UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, ... 63 2e-08 UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C ... 63 2e-08 UniRef50_C5SDU6 Integrase family protein n=1 Tax=Allochromatium ... 63 2e-08 UniRef50_C1IBC3 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FA... 62 3e-08 UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepI... 62 3e-08 UniRef50_B7AAK4 Integrase family protein n=3 Tax=Thermus aquatic... 62 3e-08 UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoana... 62 3e-08 UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepI... 62 4e-08 UniRef50_A5N1D5 Phage integrase-related protein n=2 Tax=Clostrid... 62 4e-08 UniRef50_D2BLD3 Phage integrase n=4 Tax=root RepID=D2BLD3_LACLK 62 4e-08 UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus... 62 5e-08 UniRef50_Q3SSJ3 Phage integrase n=1 Tax=Nitrobacter winogradskyi... 62 5e-08 UniRef50_B4ALS6 DNA integration/recombination n=1 Tax=Bacillus p... 62 5e-08 UniRef50_A8LF05 Integrase family protein n=1 Tax=Frankia sp. EAN... 62 5e-08 UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp... 62 6e-08 UniRef50_C3IU95 DNA integration/recombination/inversion protein ... 62 6e-08 UniRef50_Q39UR0 Phage integrase n=3 Tax=Geobacter RepID=Q39UR0_G... 62 6e-08 UniRef50_Q252J3 Putative uncharacterized protein n=1 Tax=Desulfi... 61 6e-08 UniRef50_Q854V7 Gp41 n=1 Tax=Mycobacterium phage Che9c RepID=Q85... 61 6e-08 UniRef50_Q11LX6 Phage integrase n=1 Tax=Chelativorans sp. BNC1 R... 61 7e-08 UniRef50_UPI0001C376B0 phage integrase family site specific reco... 61 7e-08 UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostrid... 61 7e-08 UniRef50_C1SIY0 Site-specific recombinase XerD n=1 Tax=Denitrovi... 61 8e-08 UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius... 61 9e-08 UniRef50_D1UBS2 Integrase family protein n=1 Tax=Desulfovibrio a... 61 9e-08 UniRef50_D0WGY0 Putative phage integrase n=1 Tax=Slackia exigua ... 61 9e-08 UniRef50_UPI0001C3746F phage integrase family site specific reco... 60 1e-07 UniRef50_A4J0G7 Phage integrase family protein n=1 Tax=Desulfoto... 60 1e-07 UniRef50_C8VWK7 Integrase family protein n=1 Tax=Desulfotomaculu... 60 1e-07 UniRef50_O64373 Integrase n=1 Tax=Lactobacillus phage A2 RepID=O... 60 1e-07 UniRef50_C6LMN6 Phage integrase n=1 Tax=Bryantella formatexigens... 60 2e-07 UniRef50_B5YIK4 Site specific recombinase n=1 Tax=Thermodesulfov... 60 2e-07 UniRef50_A6G8N0 Phage integrase n=2 Tax=Plesiocystis pacifica SI... 60 2e-07 UniRef50_D0L542 Integrase family protein n=3 Tax=Bacteria RepID=... 60 2e-07 UniRef50_UPI0001C37D82 integrase family protein n=1 Tax=Ruminoco... 60 2e-07 UniRef50_UPI0001694281 DNA integration/recombination/invertion p... 60 2e-07 UniRef50_A4J7T2 Phage integrase family protein n=1 Tax=Desulfoto... 60 2e-07 UniRef50_P62904 Transposase from transposon Tn1545 n=57 Tax=Bact... 60 2e-07 UniRef50_B2V4P6 Phage integrase family protein n=9 Tax=root RepI... 60 2e-07 UniRef50_C1CUZ9 Putative phage integrase n=1 Tax=Deinococcus des... 60 2e-07 UniRef50_Q1MRZ7 Prophage DLP12 integrase (Fragment) n=1 Tax=Laws... 60 2e-07 UniRef50_C2KIC3 Bacteriophage integrase n=2 Tax=Leuconostoc mese... 60 2e-07 UniRef50_A6BHH7 Putative uncharacterized protein n=2 Tax=Clostri... 60 2e-07 UniRef50_C3WPY1 DNA integration/recombination/invertion protein ... 60 2e-07 >UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Tax=Bacteria RepID=INTR_ECOLI Length = 411 Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/411 (100%), Positives = 411/411 (100%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE Sbjct: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES Sbjct: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF Sbjct: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAW 240 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAW Sbjct: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAW 240 Query: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT Sbjct: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT Sbjct: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS Sbjct: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 >UniRef50_C6DJ77 Integrase family protein n=4 Tax=Enterobacteriaceae RepID=C6DJ77_PECCP Length = 255 Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust. Identities = 177/254 (69%), Positives = 220/254 (86%) Query: 158 VRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ 217 +RTVDNYIALLCSLLRFA++SGFIS +PFEG+KKLQ++R +PDPL K EF+ L+ S GQ Sbjct: 1 MRTVDNYIALLCSLLRFAHRSGFISGRPFEGIKKLQKSRPRPDPLLKHEFDQLIGSLSGQ 60 Query: 218 SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLL 277 S+NLW+ AVY+GLRHGELAALAWED+DL+ G++++ RNLTIL FGPPKT AGIRTVTLL Sbjct: 61 SKNLWQLAVYTGLRHGELAALAWEDIDLDAGVIHISRNLTILGHFGPPKTQAGIRTVTLL 120 Query: 278 QPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG 337 +PALEAL+ Q K TG+ R ++I ++HREYG TE Q+L FVF+PRV NG+QK YS ++G Sbjct: 121 KPALEALQSQMKTTGNKRTNDIVYHHREYGLTEIQRLRFVFLPRVRNGEQKISYSCGTMG 180 Query: 338 ARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 + WN AVKR+GIRRRNPYHTRHT+ACWLL+AGANP+FIA+QMGHE AQMVYEIYG WI+D Sbjct: 181 SLWNTAVKRSGIRRRNPYHTRHTYACWLLSAGANPSFIANQMGHENAQMVYEIYGKWIED 240 Query: 398 MNDEQIAMLNARLS 411 MN++Q+ MLN +L+ Sbjct: 241 MNEDQVGMLNRKLA 254 >UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z3D7_LISDA Length = 428 Score = 331 bits (848), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 177/415 (42%), Positives = 247/415 (59%), Gaps = 4/415 (0%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 MS P G+E+RG+ IRI F F+GKRCRETL GW++T SNIKKAG LRA+IV EI G+F Sbjct: 1 MSMYPEGIEVRGKSIRITFYFKGKRCRETLTGWDVTPSNIKKAGRLRAVIVSEIACGKFN 60 Query: 61 YLRRFPQSSTGAKMVT--TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 YL RFP S ++ V + + + + IK ELT +++ +T+S LKT ++ Sbjct: 61 YLERFPNSKNTLQISVQNPHVDCSLNDFIEHFLLIKSVELTESSIIRTRSGLKTCAKLLG 120 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 IS+I ++DI++ R +LL+G R GR+V+TV+ Y+ + SL ++AY++ Sbjct: 121 GERLISNITHADIMSMRLKLLNGSNFSPSPIRRTSNGRSVKTVNTYLTICSSLFKYAYRT 180 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALME--SEKGQSQNLWKFAVYSGLRHGELA 236 I T PF+GV +L+ + P+PL EF L+ S + Q NLW AVY+GLRHGEL+ Sbjct: 181 EAIHTNPFDGVSRLRTVKTPPNPLEHDEFIRLINHPSIREQDVNLWTVAVYTGLRHGELS 240 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 ALAWED+DL K + V+R T F PKT +G RT+ LL PA EAL Q T + Sbjct: 241 ALAWEDIDLVKRTITVKRTATQQKRFRVPKTESGERTINLLAPAYEALVRQKACTFLYPS 300 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 + R+ +++ +VF + + K S + W K AGI RNPY Sbjct: 301 IAVEVESRQKRNHIQEQCTWVFRMTSYSAEAKGNISTKVISNMWRKCTKLAGIAYRNPYQ 360 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 TRHT+ACWLL +GANPAFIASQMGH MV +YG W+ N+ +IA + +L+ Sbjct: 361 TRHTYACWLLNSGANPAFIASQMGHSDMSMVISVYGAWMPSNNESEIAKIERQLN 415 >UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826473 Length = 431 Score = 330 bits (847), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 172/414 (41%), Positives = 246/414 (59%), Gaps = 5/414 (1%) Query: 2 SKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEY 61 S PTGVE G +RIWF+++G R RE+L G T N K AG LRA + I +G F Y Sbjct: 4 SAYPTGVENHGGTLRIWFIYKGSRVRESL-GVPDTPKNRKVAGELRASVCFSIKTGSFNY 62 Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 +FP S + T EL + W ++K E++TN M + S + + I Sbjct: 63 AAQFPDSPNLRRFGMESKEITVLELANKWLELKRMEISTNAMSRYSSIARNMVPRIGGDR 122 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 +S + D+L R ELL G + ++ KGR+VRTV+NY+ + + FA SG++ Sbjct: 123 LVSAVTQEDLLFIRKELLTGYHVLKTGQKTPVKGRSVRTVNNYMRTMSGMFNFAADSGYV 182 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMES-EKGQSQNLWKFAVYSGLRHGELAALAW 240 PF G+ L+R R +PDPL++ EF ++ + Q +N+W AVY+G+RHGEL ALAW Sbjct: 183 KANPFNGISLLKRARTEPDPLTREEFIRMINACTHQQLKNMWSLAVYTGVRHGELVALAW 242 Query: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGI-RTVTLLQPALEALKEQYKLTGHHRKSEI 299 ED+DL+ G + +RRN T+ F PKT AG R + L+QPA++ LK Q ++T ++ +I Sbjct: 243 EDIDLKAGTMIIRRNHTLTKEFTLPKTEAGTDRIINLIQPAIDVLKSQAEMTRLGKQHQI 302 Query: 300 TFYHREYGRTEKQKLHFVFMPRVC--NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 REYGR+ FVF P++ N +Y+V S+ W +A++RAGIR R Y + Sbjct: 303 EVKLREYGRSVAHPCTFVFNPQIVSRNSLAGNHYAVGSINQSWESAMRRAGIRYRKAYQS 362 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT+ACW L AGANP FIA QMGH AQMVY +YG W+ + N +Q+ +LN +LS Sbjct: 363 RHTYACWSLAAGANPNFIAKQMGHTDAQMVYRVYGSWMAENNQDQVLILNQKLS 416 >UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XGP6_9ENTR Length = 427 Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 161/409 (39%), Positives = 247/409 (60%), Gaps = 6/409 (1%) Query: 3 KLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 K PTGVE+ G+ +RI F ++GKR RETL G T N K AG LR I ++I +G F+Y Sbjct: 4 KYPTGVEVHGKSLRISFTYKGKRVRETL-GIPDTPKNRKLAGELRTAICYKIKTGAFDYS 62 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 FP+S + + TFG + + W ++K E+ +T + KS + L I ++ Sbjct: 63 VEFPESKNCNEKSISNKNVTFGYVANKWVELKRIEVAVSTFEAYKSIVNVLFFFIDKNKM 122 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 I+ DIL+ RN++L T+ N R +K GR+V TV+NY+ +L + FA ++ +I Sbjct: 123 INLFNLEDILSVRNKMLTSPTIEPVN-RVSKIGRSVSTVNNYMKILNCIFCFAAENKYIE 181 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWE 241 T +K L+++R PDP++K EF L+ + + Q++N+ +VY+GLR GEL ALA+E Sbjct: 182 TNVLSSIKNLKKSRAVPDPITKEEFPRLLNATRNIQAKNMLIVSVYTGLRPGELCALAYE 241 Query: 242 DVDLEKGIVNVRRNLTILDMFGPPKTNAGI-RTVTLLQPALEALKEQYKLTGHHRKSEIT 300 D+D + + V+RN++ + F PKT + R + +L P E+L+EQ LT + Sbjct: 242 DIDFIERTITVKRNISNIGDFSLPKTPSSTDRVIHMLDPVYESLREQMSLTRMTSPEIVN 301 Query: 301 FYHREYGRTEKQKLHFVFMPRVC--NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 REYG+ + FVF P V NG + +YS W A +KR+G+R R Y TR Sbjct: 302 VEMREYGKYREDSCTFVFQPSVVARNGLETKHYSPGGFNGIWGALIKRSGVRHRKSYQTR 361 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 HT+ACW+L+AGANPAFIA+QMGH +A+M+Y++YG W+ + + +QIA++N Sbjct: 362 HTYACWMLSAGANPAFIATQMGHSSAKMIYDVYGAWMKENDKDQIAIMN 410 >UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteriaceae RepID=A8GE25_SERP5 Length = 428 Score = 308 bits (790), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 163/416 (39%), Positives = 239/416 (57%), Gaps = 7/416 (1%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 M PTGVE G +RIWF+F+GKR RE L G T N K AG LR + +EI +G F Sbjct: 1 MKAYPTGVENHGGTLRIWFLFQGKRVRENL-GIPDTPKNRKAAGELRTSVCYEIKTGNFS 59 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Y +RFP +S + R T ++ W +KE E++ T+ + S + Sbjct: 60 YEKRFP-NSRNVTINAARENITVNDIIKKWLNLKEMEVSKGTLYRYTSHCGVTASYLNPE 118 Query: 121 TPISHIRYSDILNYRNELL--HGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 I+ IR DIL R +L + + +S ++GR V TV++Y+ + ++ FA + Sbjct: 119 RKINEIRQEDILLARKRMLTEPQQPKIHEKRKSVRQGRAVPTVNSYMFCMRAIFDFAVSN 178 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES-EKGQSQNLWKFAVYSGLRHGELAA 237 G+I+ PFEGV L++ R PDPL+K E+ ++ S Q +N+ A+ +GLRHGEL A Sbjct: 179 GYIANNPFEGVSPLKKQRPAPDPLTKEEYQRVIVSCPTQQMRNMITLAINTGLRHGELYA 238 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 LAWED+D + +++ RNL++ + F PKT+AG+RT+ L A+EA+K Q LT Sbjct: 239 LAWEDLDTQNWTISISRNLSLKEHFTLPKTDAGMRTIQLTTVAIEAIKSQMALTRLSNAH 298 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVC--NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 +T REYG+ F+F PR+ NG +YS + W +++AG++ R Y Sbjct: 299 RVTVNLREYGKKRTDDCTFIFSPRITSRNGSSADWYSPGAFNGAWKTILRKAGVKHRKSY 358 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 TRHTFACW L+ GANP F+A QMGH +AQM+Y +YG W+ + ND Q+ +LNA S Sbjct: 359 ETRHTFACWALSCGANPNFVAHQMGHSSAQMLYNVYGKWMTENNDHQVNILNASFS 414 >UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH Length = 412 Score = 307 bits (786), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 176/412 (42%), Positives = 233/412 (56%), Gaps = 19/412 (4%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 MS LPTGVEI +RIWFM++GKR RE+LK T NIK A + R I H I +G+F Sbjct: 1 MSALPTGVEIHAGQLRIWFMYKGKRQRESLKC-PPTPKNIKLAASRRTAICHAIQTGQFI 59 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Y FP+S + + I T EL D W +K E+T T+K + ++K + + E+ Sbjct: 60 YKEWFPESKKANQYSDKKDI-TIKELFDRWLDLKVIEVTPATIKNYQQRVKQVYWHLPET 118 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 T +S + +L R ET + T + Y+ L + FA SG+ Sbjct: 119 TLVSEVTQEKLLELRKRFT--ETC------------SPSTANTYMRTLKGIFSFAINSGY 164 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALME-SEKGQSQNLWKFAVYSGLRHGELAALA 239 G+K+L+ + KP PLS+ EF ++E + Q N W AVY+GLRHGEL ALA Sbjct: 165 SDPALLNGIKELKTQKRKPQPLSEEEFQRVIEHCQHEQDANFWTVAVYTGLRHGELMALA 224 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 WED+DLE G + VRRNLT+ F PKT +G RTV LL PAL ALK Q K T + EI Sbjct: 225 WEDIDLENGTITVRRNLTLEGRFKLPKTISGERTVNLLNPALAALKAQMKWTFMLPELEI 284 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQ--KPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 REYG+ ++Q + VF P V + YY S+ +WN KRA + R PY T Sbjct: 285 DVLQREYGKLQRQFIRPVFSPSVTARYEVDNRYYHHVSIWEKWNMLCKRAKLTYRKPYQT 344 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 RHT+ACW+L+AGANP FIA QMGH +A+ VY+ YG W+ D Q+ MLNAR Sbjct: 345 RHTYACWMLSAGANPTFIAKQMGHSSAKEVYQTYGDWVGDHTKGQLDMLNAR 396 >UniRef50_P76168 Putative lambdoid prophage Qin defective integrase (Fragment) n=64 Tax=root RepID=INTQ_ECOLI Length = 385 Score = 305 bits (781), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 235/373 (63%), Gaps = 7/373 (1%) Query: 44 GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTM 103 G LR+ + + I +G F+Y ++FP S K R T EL + + +KETE+ ++ Sbjct: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 Query: 104 KKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 ++ +K + II E S I +L R ELL G + N + GR+ TV+N Sbjct: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Query: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-SQNLW 222 Y+ L ++ +F +G+++ PF+G+ L+ +R PDPLS+ EF L+++ + Q ++NLW Sbjct: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 Query: 223 KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGI-RTVTLLQPAL 281 +VY+G+R GEL AL WED+DL+ G + +RRNL D F PKT AG R + L++PA+ Sbjct: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLA-KDRFTVPKTQAGTNRVIHLIKPAI 239 Query: 282 EALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPY---YSVSSLGA 338 +AL+ Q LT ++ I + REYGRTEKQK FVF P V + + K Y ++V S+ Sbjct: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEV-SARVKNYGDHFTVDSIRQ 298 Query: 339 RWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 W+AA+KRAG+R R Y +RHT+ACW LTAGANPAFIA+QMGH AQMV+++YG W+ + Sbjct: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 Query: 399 NDEQIAMLNARLS 411 N+ Q+A+LN +LS Sbjct: 359 NNAQVALLNTQLS 371 >UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio harveyi group RepID=A7MYL9_VIBHB Length = 411 Score = 301 bits (771), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 170/410 (41%), Positives = 239/410 (58%), Gaps = 14/410 (3%) Query: 5 PTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRR 64 P GVEIRG+ IRI F +R RCRETLKGWE+T N+KKA LRA I+ EI+ G F+YL R Sbjct: 4 PEGVEIRGKSIRISFTYREMRCRETLKGWEVTKGNLKKASQLRASILSEISLGTFDYLSR 63 Query: 65 FPQSSTGAKMVTTRVIK----TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 FP +S A++ T + T EL D + ++K+T + + ++ + + + I E Sbjct: 64 FP-TSKKAQLFATPEQRGKNLTVRELFDDYIQLKKTTMASQSLYVLNNTARACCLFIGEE 122 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 IS+I D L + L +D+P N + R+ +T++N I L+ A +S F Sbjct: 123 RTISNITIMDALKC-------QKLMVDSPTRNGRPRSAKTINNMIKLMRRCFDLAVKSKF 175 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALA 239 I PF V+ L +PDPL EF+ L+ES Q +N++ A+Y+G+R GEL ALA Sbjct: 176 IDDNPFLHVELLSGGSGEPDPLELEEFHQLIESTTNLQQRNIFTLAIYTGMRTGELCALA 235 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 WEDVDLEKG + V RN+TI F PK RT+ LLQPAL ALK Q KLT +I Sbjct: 236 WEDVDLEKGTIEVTRNVTIERKFTTPKNKKSERTIHLLQPALLALKSQRKLTMLGPVRDI 295 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQ-KPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 + ++ + FVF+P NG++ Y ++ W+ A+KRAGIR R Y +R Sbjct: 296 LVEVKGSNTFRQESVQFVFIPEHRNGQETSETYKTTTYNRLWSRALKRAGIRHRCSYQSR 355 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 HT+ACWL+T GAN +FIA QMGH++ M+ +YG ++ + EQI LN Sbjct: 356 HTYACWLITKGANLSFIAEQMGHKSTMMLERVYGRFMKSHSHEQIEYLNG 405 >UniRef50_B0KSD4 Integrase family protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KSD4_PSEPG Length = 417 Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 132/404 (32%), Positives = 200/404 (49%), Gaps = 26/404 (6%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 TG+EI G +RI FM+R RCRE+L G +T +NIK A LRA I+HEI G FEY R F Sbjct: 18 TGIEIHGGNLRIVFMWRRIRCRESL-GLPVTKANIKHAALLRAAILHEIKLGTFEYGRHF 76 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISH 125 P S + + L + + +K ++T T +K + ++ Sbjct: 77 PNSKHATNYSNAKD-ERLEALAERYKPLKAIDITPMTEEKYAYAIDICVALVGGDRLAGI 135 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 + DI R L+ + R T ++Y+A L + + + Sbjct: 136 LLPEDIHVLRARLI--------------ETRAPSTANHYLATFAGFLTWCESNNYCMAGL 181 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWK--FAVYSGLRHGELAALAWEDV 243 + + +PDPL+ EF+ L+ + Q+ AVY+GLR GEL ALA ED+ Sbjct: 182 AGACTRFAMSDKEPDPLTHDEFDLLISNGCLHPQDAAAITLAVYTGLRPGELCALAVEDI 241 Query: 244 DLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 +L+ G + + R +T F PKT RTV L++PALEA + ++ +H K +I Y Sbjct: 242 NLQAGKIEITRAITADGSFKTPKTGKP-RTVLLMEPALEACRTLLEIVMNHPKRDIRVYQ 300 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQK----PYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 R E +++ + +K ++ ++ +W A +RAGIR R PY TRH Sbjct: 301 ---NRHEWREISVTPLLSPSTQARKRGINEWFVSTAWNTKWAAIQRRAGIRPRRPYQTRH 357 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 T+ACW LTA N AFIA QMGH+ M+ E+Y W+D +DE++ Sbjct: 358 TYACWCLTARGNLAFIAKQMGHKDFTMLVEVYAKWMDSESDEEL 401 >UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID=A8T0M8_9VIBR Length = 407 Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 133/407 (32%), Positives = 201/407 (49%), Gaps = 34/407 (8%) Query: 3 KLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 KLP GVEI G+ +R+ F+++GKR RETL G T N++ A R I++EI G F Y Sbjct: 8 KLPAGVEIHGKSLRLDFVYKGKRRRETL-GLSPTKQNVRFAAQKRETIMYEIKIGIFRYA 66 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 FP S + +R TFGE+ D + ++K+ +L ++T KK S K + + Sbjct: 67 AHFPDSPYATEQSQSR---TFGEMVDKYLQLKQADLRSSTYKKYVSLFKITKNAYGANRS 123 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 S + + R L+ KGR RT++ Y + + + ++ G++ Sbjct: 124 CSTLSPESVSELRALLI--------------KGRGARTLNTYFRAINTFFGWLHKMGYVD 169 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFN-ALMESEKGQSQNLWKFAVYSGLRHGELAALAWE 241 E + ++ +P + E N AL + Q +N+ Y+GLR GE+ LAWE Sbjct: 170 RNFSEFMPSVKTPERNINPFTIDEINKALDACMQEQHKNMITLLAYTGLRTGEICGLAWE 229 Query: 242 DVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 DVD E ++ +RR PKT+ RTV L+ PALEAL+ Q KL+ H+ + E Sbjct: 230 DVDFENKVLTIRRATFESRGLKTPKTDRE-RTVDLMPPALEALQAQKKLSSHYPQKE--- 285 Query: 302 YHREYGRTEK----QKLHFVFMPRVC---NGKQK-PYYSVSSLGARWNAAVKRAGIRRRN 353 E +K + FVF P+ N K Y+S ++ W RAGI RN Sbjct: 286 --HEVELADKTIRLDNIRFVFNPKATENLNAKTPYDYFSKTAPNKMWRNICIRAGIPYRN 343 Query: 354 PYHTRHTFACWLLT-AGANPAFIASQMGHETAQMVYEIYGMWIDDMN 399 Y RHT+A W+L+ A N A++A QMGH M+ +YG W+ + N Sbjct: 344 VYQLRHTYASWMLSYANVNIAYLAQQMGHSNFLMIASVYGKWMKNKN 390 >UniRef50_Q1QXU7 Phage integrase n=4 Tax=root RepID=Q1QXU7_CHRSD Length = 388 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 127/399 (31%), Positives = 198/399 (49%), Gaps = 35/399 (8%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + GVE+RG +R++F ++G+ CRE L G + T NI+ A L +I +EI++G F+Y R Sbjct: 1 MADGVEVRGNTVRVYFRWQGELCREPLPG-KATERNIEHARRLVTIINYEIDAGTFDYAR 59 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKT---LRIIICES 120 FP+S + TFG D+W IK+ EL ++ + S+ +T R ++ Sbjct: 60 HFPESRRLHE-------STFGFYLDLWLAIKKNELAYSSYRGIASKAETHVRPRWGNEQA 112 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 I HI D + + +L +L N +T+ ++++ R Sbjct: 113 DDIDHIELQDWI--QKDL----ATHLAN----------KTIKEVVSIMRQTFRLYATRNK 156 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES--EKGQSQNLWKFAVYSGLRHGELAAL 238 + P G+ + PDP K E ++E+ ++ Q NL KFA+Y G R E AL Sbjct: 157 KAFDPTLGINIRLPDDEDPDPFEKAEIRKILETPTKRVQELNLMKFAMYDGPRISEAQAL 216 Query: 239 AWEDV-DLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 AWEDV D+EKGI+ RR + + F KT R LL+PA EAL+EQ+ LTG+ Sbjct: 217 AWEDVLDVEKGIIRYRRAV-VRGRFKVTKTKRSTRVHHLLKPAREALQEQFALTGNLPAQ 275 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 R+ ++KL VF+ + KP+Y + W +++AG+R R P Sbjct: 276 TYQVVDRDNRTVRQEKLRLVFLNSLSG---KPFYENAIRQRFWKTHLEKAGVRYRGPNQC 332 Query: 358 RHTFACWLLTAGANPA-FIASQMGHETAQMVYEIYGMWI 395 RHTF +L+ G P +IA+ +GH + M+ YG WI Sbjct: 333 RHTFISQMLSLGVVPLHWIANHVGHSSITMIQRRYGKWI 371 >UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobacteria RepID=A9KZM7_SHEB9 Length = 431 Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 124/403 (30%), Positives = 196/403 (48%), Gaps = 28/403 (6%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGW-EITNSNIKKAGNLRALIVHEINSGEF 59 + KLP GVEI +RI FMF GKR RE LKG+ +IT S IK A N R I+ EI F Sbjct: 8 VEKLPVGVEINFNTVRIVFMFNGKRYREPLKGYSKITKSVIKYAENKRNTILTEIAENRF 67 Query: 60 EYLRRFPQSSTGAKMVTTRVIK-TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 +Y+ FP+S + + + + W KI++ +T K +S+ K + Sbjct: 68 DYIAHFPESIKAMEFAGILIERRNVANGVNHWLKIQDVTKAKSTSKNYRSKSKHVINYFG 127 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 IS I S +L ++ +L K G + +TV++ ++ + A++ Sbjct: 128 GDQLISEISRSHLLMFQANML-------------KAGLSPKTVNDVFTIVRGVWYVAFED 174 Query: 179 GFISTKPFEGVKKLQRNRIK--PDPLSKTEFN--ALMESEKGQSQNLWKFAVYSGLRHGE 234 G I + P + + ++R+ ++ DP ++ E A ++ + N+ F ++GL E Sbjct: 175 GIIRSNPLDRISNIERDTLEETADPFTRDELERIAADDTSRRGDINMIMFCCWTGLSLSE 234 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 + ALAWED+D VN+RR +L + PK +R + L+ PA E L EQ + T Sbjct: 235 VIALAWEDIDTVNWTVNIRR-ARVLTQYKVPKERGRVRVIELIDPAKEWLIEQMQHTMML 293 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK-PYYSVSSLGARWNAAV-KRAGIRRR 352 E+ R+ T+ + + FVF+ NGK P+Y S RW + +R +R R Sbjct: 294 PTIELEVKQRDNITTKNENIRFVFL----NGKSGLPWYDHSV--RRWFTGILERTKLRHR 347 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 P RHTFA LL+ ++A Q+GH M+ + YG WI Sbjct: 348 GPNQCRHTFASQLLSNYVPLEWVARQLGHSDTTMIKKHYGKWI 390 >UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8HM00_BURPS Length = 411 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 132/423 (31%), Positives = 202/423 (47%), Gaps = 72/423 (17%) Query: 3 KLPTGVEIR----GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGE 58 +LPTG+E+R G +R+ F +RG+ CRETLK E T NI+ A LR I+ +I G Sbjct: 6 RLPTGIEVRTGARGASLRVRFYYRGEECRETLK-MEPTPKNIQYADRLRGEILRKIEMGT 64 Query: 59 FEYLRRFPQSSTGAKMVTTRVIK----TFGE-LCDIWTK----IKETELTTNTMKKTKSQ 109 F Y FP+S A T R T GE L D T+ + +T ++ +T++ + Sbjct: 65 FNYGEYFPESKRAA---TPRAASPSEVTVGERLDDFMTQARKAVAKTRMSPSTLEGYRKV 121 Query: 110 LKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLC 169 + + + +R +D+ + ++L T++T N + L Sbjct: 122 VDGRLRPRWGAVRLVDVRPADLRKWISDL----------------DVTLKTARNILGPLG 165 Query: 170 SLLRFAYQSGFISTKPFE--GVKKLQRNRIKP-----DPLSKTEFNALMESEK-----GQ 217 S+L A I P V+KL +P DP S E A++ + G Sbjct: 166 SVLADALNDELIDENPLTKIDVRKLLSKTTRPSDYEVDPFSIDEIRAILAAADELYPGGA 225 Query: 218 SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLL 277 ++NL++FA +SG+R EL AL W VDL G+V VR N ++ KT AG+R V LL Sbjct: 226 ARNLFQFAFWSGMRTSELIALDWLHVDLNAGVVRVR-NAQVVGTMKTTKTKAGLRDVLLL 284 Query: 278 QPALEALKEQYKLT---GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVS 334 A AL+ Q ++T H+R + ++ R + ++ +++ C Sbjct: 285 PSARAALEAQREVTRGMEHNRVFVVPWHGRPWSGDKQIRVN-------C----------- 326 Query: 335 SLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMW 394 W +K+A +R RNPY TRHTFA LL+ G NP ++A QMGH +M+ + YG W Sbjct: 327 -----WTYVLKKAEVRYRNPYQTRHTFASMLLSRGENPLWVAQQMGHVDTEMITKTYGKW 381 Query: 395 IDD 397 I D Sbjct: 382 IPD 384 >UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D584_LARHH Length = 416 Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 133/402 (33%), Positives = 193/402 (48%), Gaps = 50/402 (12%) Query: 15 IRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKM 74 I I F F G+RCRE +K + T +N+K+A RA I+ I +G F Y FP S Sbjct: 20 IEIAFTFAGERCRERIK-LKPTPANLKRAAQHRAAILAAIENGTFVYAVTFPHSKKAVLA 78 Query: 75 VTTRVIKTFGELCDIWT----KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSD 130 T V K +G+ D W K E L ++T+ K+ + + I I+ SD Sbjct: 79 KRTPVAK-YGKTLDAWMSEWLKRCERYLKSSTLHDYKTIAWRQLSPVFGNHQIGDIKRSD 137 Query: 131 ILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK 190 I + + L SNK+ + N +++ + L A I T P G Sbjct: 138 IRAWCDGLTC----------SNKR------IANILSVFRASLTAAMDDELIDTNPLSGWT 181 Query: 191 KLQRNRIKPD---PLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEK 247 +R +K D P + E A++E+ N+ +FA ++GLR EL AL W+D+D Sbjct: 182 YRRREEVKEDDIDPFTPDEQTAILEALPEAGCNMIRFAFWTGLRTSELVALEWKDIDWVG 241 Query: 248 GIVNVRRNLTILDMFGP-PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 G V++ + LT PKT A R VTLLQPALEAL Q +TF+ E+ Sbjct: 242 GKVSISKALTQRATKAETPKTRASRRFVTLLQPALEALMAQ---------KAVTFFS-EH 291 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSL-GARWNAAVKRAGIRRRNPYHTRHTFACWL 365 GR PR +P+ ++ W A++RAG+R R PY TRHTFA + Sbjct: 292 GRV-------WIDPRT----GEPWTGDQAIRKTLWTPALRRAGVRYRRPYQTRHTFASMM 340 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWID--DMNDEQIAM 405 L+AG +P ++A+QMGH + M+ +YG WI D D Q A+ Sbjct: 341 LSAGESPVWVANQMGHASWTMIARVYGRWIPNGDNGDGQKAV 382 >UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria mucosa ATCC 25996 RepID=UPI0001BC493F Length = 415 Score = 167 bits (422), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 125/402 (31%), Positives = 191/402 (47%), Gaps = 48/402 (11%) Query: 3 KLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 ++PTGV IR R I+IWFM+RGKRC E+L + T +NI+ A LR + I G F+Y Sbjct: 5 RIPTGVVIRDRSIKIWFMYRGKRCWESLP-LKPTTANIRHATKLREEVCTRIAIGVFDYA 63 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 FP S + T TF E+ + W +L+ +T+ + + L + + Sbjct: 64 EFFPDSKRAEE---TERSPTFREMAEAWLATV-NQLSHSTLSRYRGMLNSHVLPKIGDMS 119 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 I I+YS L G LD + +T +N ++ A + G I Sbjct: 120 IDRIQYST--------LAGLLATLDC--------SAKTRNNIATVIRQPFVLALRDGRIK 163 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS--QNLWKFAVYSGLRHGELAALAW 240 P + + + + PDP + E A++ K + N ++ A +SG+R EL AL W Sbjct: 164 DNPAQHLANAKVQKEPPDPFTLEEAEAILGYLKNEPVFHNYFELAFFSGMRTSELIALTW 223 Query: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 +D+D ++ V V + ++ KT++ R + L ALEAL+ Q++ TG S Sbjct: 224 QDIDFQRQCVCVNK-ASVAGKLKSTKTHS-YRDIELNSRALEALRRQWQRTG--LASGYV 279 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 F + + G P+ + W A+K AG+R R PY+TRHT Sbjct: 280 FINPKTG--------------------SPFENDKVPWRPWQHAIKIAGVRYRKPYNTRHT 319 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQ 402 FA L AGANP ++A QMGH T +M+ E Y WI D+ D+Q Sbjct: 320 FATLNLMAGANPMWVARQMGHSTMKMLLENYSRWI-DLADKQ 360 >UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MG53_9PROT Length = 361 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 116/391 (29%), Positives = 187/391 (47%), Gaps = 42/391 (10%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 G+ IRG +I F ++G RCRE++ + + A L++ I +EI +G F+Y R FP Sbjct: 7 GITIRGNSAQISFTYQGVRCRESIPIPPTKTAQKELALKLQS-IKYEIKTGTFDYNRHFP 65 Query: 67 QSSTGAKMVTTRV-IKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISH 125 S + R + T E W + + +L +T++ S + I + IS Sbjct: 66 YSKKAKEFRKNRPDLYTIKEALISWLQRNQAKLQLSTLQDYNSAIYHHLIPTFGNLTISE 125 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 + S + + +EL P SNK+ N + L + Y I P Sbjct: 126 LTASKVKEWLSEL----------PCSNKRK------SNILTPLRQMFEELYLDEIIDKNP 169 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDL 245 VK L +P+P ++ E ++ GQ++NL +FA YSGLR EL AL W++V+ Sbjct: 170 LSRVKNLPNKTREPEPFTQEEIIKILNELTGQAKNLIQFAFYSGLRTSELIALCWKNVEF 229 Query: 246 EKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 E+ + +++ + KT +G R VTL A EAL Q TG ++++I F++ Sbjct: 230 EQNRIFIKQ-AHVRGQLKDTKTKSGKREVTLQPQAKEALLNQQAFTG--KQNQIVFHN-- 284 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKRAGIRRRNPYHTRHTFACW 364 P+ ++P+ + + W A+K+AGI+ RNPY TRHTFA Sbjct: 285 --------------PKT----KQPWKNDQPIRKNVWIPALKKAGIKYRNPYQTRHTFASM 326 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 LL+ G ++A QMGH+ M+ ++YG WI Sbjct: 327 LLSRGEKLLWVAQQMGHKDWGMIIKVYGRWI 357 >UniRef50_D0J3Y8 Phage integrase n=5 Tax=Burkholderiales RepID=D0J3Y8_COMTE Length = 394 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 118/408 (28%), Positives = 184/408 (45%), Gaps = 54/408 (13%) Query: 5 PTGVEIR----GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 P GV+IR G ++I F + G+ CRE L I S+I++A +LR I +I G F Sbjct: 11 PPGVKIRHLVSGDRLQIAFTWEGQECRELLPACAINKSSIQRAASLRDEIRRKIAEGGFS 70 Query: 61 YLRRFPQSS-TGAKMVTTRVIKTF--GELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 Y FP S A + +++T +L ++K +++ +T + R+ Sbjct: 71 YADYFPDSPRAAAPSKSNPLMETLLQKQLDTYARQVKNGQMSPSTYNGYAKAITGERMRR 130 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 + + S + ++ +E+ T + + N + L SL A Sbjct: 131 WHGLKVGEVLPSLLRDWVSEM----------------DCTSKAIRNMLTPLRSLFEDALN 174 Query: 178 SGFISTKPFE--GVKKLQRNRIKPD-----PLSKTEFNALMESEKGQSQNLWKFAVYSGL 230 I PFE + KL R K P S E A++++ + + + +F +GL Sbjct: 175 DELIDFNPFERIALSKLIRQTAKASDYVVTPFSAAEREAILKACRPDERPMLQFWFETGL 234 Query: 231 RHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKL 290 R GEL AL W +DLE+ I + N + + PKT AGIR V L AL AL+ Q + Sbjct: 235 RPGELQALQWSHIDLERAIARIELN-QVAGVIKGPKTAAGIRDVELSAEALAALRAQRPI 293 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL-GARWNAAVKRAGI 349 + K E + + G +P+ + + + W KRA + Sbjct: 294 S--ELKGERIWLNPRTG--------------------EPWSTDAQIRKTLWQPVCKRAEV 331 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 RNPY RHT+A LLTAGANP ++ASQ+GHE +MV+ YG +I D Sbjct: 332 EYRNPYQVRHTYASALLTAGANPWYVASQLGHEDVEMVFRTYGKFIRD 379 >UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G7G1_HERAR Length = 387 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 126/410 (30%), Positives = 190/410 (46%), Gaps = 52/410 (12%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETL----KGWEITNSNIKKAGNLRALIVHEINS 56 M +GVE+R IRI F F+GK+ +ET+ + T +NIK A + A + ++ + Sbjct: 1 MGPRTSGVEVRETSIRIIFTFQGKQRKETICLDNEPLHPTPANIKYATRIAAEVRDKVRT 60 Query: 57 GEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRII 116 G F Y FPQS + + T GE D W + EL +T+ + K + Sbjct: 61 GLFAYADYFPQS----RHAKPDHVGTVGEFMDKW--YAQLELKPSTLSEYKRMKENFWKP 114 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 + I +SDI L SN RT +N + +L ++ A Sbjct: 115 ALGRKRVDKITHSDITT---------ALKSGTWSSN------RTRNNMLYMLRAVFNLAV 159 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFN----ALMESEKGQSQNLWKFAVYSGLRH 232 G I P ++ Q R KPDP S E N +L E + Q N ++F +SGLR Sbjct: 160 ADGVIHKNPCATIENAQWQRKKPDPFSIVEANRIIASLHEKQHQQVANFYEFMFFSGLRT 219 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 GE L W +VDL K IV +R++ +M KT++ RTV L AL+ALK Q T Sbjct: 220 GEGLGLDWANVDLHKRIVVIRQSFVRGEM-QETKTSSE-RTVKLTNRALDALKRQKAWTL 277 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 + + F++ R ++ + +PY W A+K GIR R Sbjct: 278 LDKSGRV-FHNPSTNRPWAKEQNI----------SEPY---------WKPALKLLGIRYR 317 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQ 402 PY+TR T+A L +GA PA++A+Q+GH + ++ Y Y WI D +D++ Sbjct: 318 RPYNTRATYATIGLMSGARPAYMAAQLGH-SLEVFYRDYADWIADQDDDR 366 >UniRef50_C4TVA5 Bacteriophage integrase n=3 Tax=Enterobacteriaceae RepID=C4TVA5_YERKR Length = 396 Score = 140 bits (353), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 118/415 (28%), Positives = 189/415 (45%), Gaps = 64/415 (15%) Query: 2 SKLPTGVEIR----GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSG 57 +KLP G+ +R G+ I I F ++G +CRE L E+T NIK A L I + I G Sbjct: 7 AKLPRGITVRSHKTGQTINITFTYKGVKCREPLSNIEVTPKNIKYAERLLGEIHNRIERG 66 Query: 58 EFEYLRRFPQSST----GAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTL 113 F Y +FP+S G + + K E I K + T KK S L +L Sbjct: 67 TFNYADQFPRSVRLNVFGNNQSSKHIKKYLDEYISICESRKLSPATIAGYKKCLSALSSL 126 Query: 114 -RIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLL 172 + + + TP + + N+ + G+ + L +T+ N ++ L S + Sbjct: 127 HEVNVSDLTP------AIVKNW----IQGQKVAL------------KTIRNRLSFLGSAI 164 Query: 173 RFAYQSGFISTKP--------FEGVKKLQRNRIKPDPLSKTEFNALMESE-KGQSQNLWK 223 A G + P ++G + DPLS E A++ + Q +NL++ Sbjct: 165 DEAVTDGLLPANPVSLVSASRYQGEDVRSESEYVVDPLSPDEAKAILSTAMNAQWENLFR 224 Query: 224 FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEA 283 FA+++G+R EL A+ W+D+DL +V ++ + KT AG R + L AL A Sbjct: 225 FALHTGMRSSELCAIRWQDLDLVGNTAHV-ITASVEGVIKGTKTKAGRRKIELDSDALLA 283 Query: 284 LKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNA 342 +K Q TF +Y VF N + + ++ + W Sbjct: 284 VKNQ---------KPFTFMLNKY----------VFHDPKTN---EAWTGADAIRKKAWIP 321 Query: 343 AVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 +KRAG+R RNPY TRHTFA ++ GAN ++A QMGH+ +M++ YG ++ + Sbjct: 322 TLKRAGVRYRNPYQTRHTFATMHISQGANLFWLAGQMGHKGPEMLFRHYGSFLKE 376 >UniRef50_A4WAT6 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WAT6_ENT38 Length = 140 Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 61/87 (70%), Positives = 70/87 (80%) Query: 324 NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHET 383 N KPY S+S +G RWN+AVKRAGIRRRNPYHT HTFACWLL+AGANP+FI + MGHE Sbjct: 40 NRTPKPYSSLSRIGIRWNSAVKRAGIRRRNPYHTPHTFACWLLSAGANPSFITNPMGHEN 99 Query: 384 AQMVYEIYGMWIDDMNDEQIAMLNARL 410 AQ VYEIY WI+ +N EQ+AMLN L Sbjct: 100 AQRVYEIYATWIEALNSEQVAMLNPTL 126 >UniRef50_A7N7U1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7N7U1_VIBHB Length = 341 Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 24/280 (8%) Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 STPI +R+SDI+ +EL SNK +++ ++ +L ++ A + G Sbjct: 59 STPIDAVRHSDIIEMLDEL--------HERYSNK------SINEFLTILRAVFLRAERDG 104 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES---EKGQSQNLWKFAVYSGLRHGELA 236 + P G+K L+ + P+P +K E + L ++ E+G+ N + VY+GLR EL Sbjct: 105 VVDRNPMNGIKNLKAIKPIPNPFTKKELSQLHQTLGCEQGK--NAVELDVYTGLRISELL 162 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 AL+WED+D E ++ VRR +L + KT R V L + A++ALK Q+ LTG Sbjct: 163 ALSWEDIDWENRVLLVRR-AKVLQSYKTTKTKESTRKVELNELAIQALKRQWALTGQLEA 221 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW-NAAVKRAGIRRRNPY 355 +I+ + ++++H VF N +P+ + + A +++AG+ R Sbjct: 222 VKISVLQDDNKSYIEERVHIVFYNSQTN---QPFLHAAQFNNTFFRAFLEKAGVAHRGVG 278 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 RHTFA LTAG +IA QMGH M+ + YG WI Sbjct: 279 QLRHTFASQNLTAGIAKDWIAMQMGHADTSMIDDHYGQWI 318 >UniRef50_B0VUJ0 Putative integrase n=1 Tax=Acinetobacter baumannii SDF RepID=B0VUJ0_ACIBS Length = 356 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 84/254 (33%), Positives = 134/254 (52%), Gaps = 11/254 (4%) Query: 150 RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNA 209 + N +TVR + + + ++ R Q + PFE + Q + +PDP SK E Sbjct: 100 KENLNNKTVREIVTRFSQIHAIWRDERQMPY---NPFENIVIHQVDTPEPDPFSKVEIAM 156 Query: 210 LMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTN 268 ++ +E QNL ++GL E +AWED+DLEKG + + R+ + ++ K Sbjct: 157 ILNTETDLDIQNLLPCLFWTGLSMSEQIPIAWEDIDLEKGTIQISRSY-VRGIYRVTKNR 215 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 R + LL+PA+ ALK+QY++TG+ R I R+ +K+ FV++ N ++ Sbjct: 216 RRKRRIKLLEPAINALKKQYQITGNARAKTIEVLQRDNKTKRTEKVRFVWI----NHERS 271 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG-ANPAFIASQMGHETAQMV 387 ++ L RWN +K+A +R+R RHTFA LLT+G P +IA Q+GH M+ Sbjct: 272 NHFEYHELRYRWNKHLKKAKVRKRGINQGRHTFASQLLTSGQVPPEWIAEQLGHSDTSMI 331 Query: 388 YEIYGMWI-DDMND 400 Y+ YG I +DM D Sbjct: 332 YKHYGKLIAEDMPD 345 >UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobacteria RepID=A5WDD8_PSYWF Length = 401 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 102/411 (24%), Positives = 187/411 (45%), Gaps = 42/411 (10%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 + RG+ + + F + G RCRET + T N KK + + EI G F Y + FP Sbjct: 3 SIRSRGKKLFVDFRYLGVRCRETTNLID-TPENRKKLQKIIERMEAEIVLGTFNYAQYFP 61 Query: 67 QSSTGAKMVT--------TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 +S +KM+ + +F + ++W KE E +K + + + Sbjct: 62 KSDKASKMMALNDRKECINTSMPSFKQFAELWFSEKEIEWRDTYKRKIREIIDMYLLPEF 121 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 + PI I+ +++L +R+ L + P S + +++ + L +L+ A + Sbjct: 122 QGRPIDTIKKTEVLAFRSALAKVTRGKVKKPLSAAR------INSIMVPLGMILKEASKR 175 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAAL 238 + P+E +K L+ R P + E + + +N + ++G+R E+ L Sbjct: 176 -YKFENPYEDIKSLKEPRTSIQPFTLDEVWKFINWVREDYRNYYLVRFFTGMRTSEIDGL 234 Query: 239 AWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 WE++D ++ + + + L + PPKT R + + +ALKEQ+K+T Sbjct: 235 TWENIDFDRREIVINQAL-VKGKIVPPKTQESYRAIQMSPWVYDALKEQHKVT------- 286 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKRAGIRRRNPYHT 357 Y R+E +VF C+ +P +++ R W+ +K G+++RN Y T Sbjct: 287 -------YKRSE-----YVF----CSHTGEPL-DYNNVNKRVWHPTLKALGLKKRNAYQT 329 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 RHT A L AG +P +IA QMGH T +M++ Y ++ +M + + A Sbjct: 330 RHTAATLWLAAGESPEWIAYQMGHSTTKMLFNTYSRYVPNMTRQDGSAFEA 380 >UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria RepID=A4AD26_9GAMM Length = 399 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 106/401 (26%), Positives = 172/401 (42%), Gaps = 45/401 (11%) Query: 8 VEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 V RG + F +RG RCRE E +N K+ ++ + EI G F+Y FP+ Sbjct: 4 VNARGNKLFFDFRYRGVRCRE-YTHLEDKPANRKRMKDILQRVESEIVLGTFDYAAYFPE 62 Query: 68 SSTGA------KMVTTRVIKT--FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 S A K + R KT F D W + + + + L I Sbjct: 63 SPNAARFADHDKQIEQRSAKTPTFKAFADQWMEENRIGWKPSYINTLEHSLSKHVIPAFG 122 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKK-GRTVRTVDNYIALLCSLLRFAYQS 178 S P+S I DIL +RN+L PR + G + ++ + L ++R A + Sbjct: 123 SVPMSAISKEDILAFRNQLAR-------IPRKDGSVGLSAARINTVMVPLRQIMREASER 175 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAAL 238 F P++G+K L+ R K +P + E A+++ + ++G+R GE+ L Sbjct: 176 -FGFDNPYQGIKLLKVPRTKVEPFTLDEVKAVLDGVREDFHAYMTVRFFTGMRTGEIHGL 234 Query: 239 AWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 W+ +D ++ ++ VR + + KT R + + ALK Q+K TG Sbjct: 235 KWKYIDFKQRMILVRESY-VAGAMTDTKTEESARDIPMSDEVYAALKAQHKRTG------ 287 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKRAGIRRRNPYHT 357 KL VF C G +P S++++ R W + I +R PY T Sbjct: 288 --------------KLDLVF----CTGSGEPL-SINNVCKRVWYPLLALLKIPKRPPYQT 328 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 RHT A L AG NP ++A +GH + + ++ Y WI ++ Sbjct: 329 RHTAATLWLAAGENPLWVAQILGHSDSAITHKRYARWIPNL 369 >UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaproteobacteria RepID=A0KWT4_SHESA Length = 407 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 113/415 (27%), Positives = 180/415 (43%), Gaps = 69/415 (16%) Query: 10 IRGRYIRIWFMF--RGKRCRETLKGWEITNS-NIKKAGNLRALIVHEINSGEFEYLRRFP 66 IR R +++F F G RCRE + I N N K N+ I EI F + FP Sbjct: 4 IRARDGKLFFDFTYEGIRCRE--QTVLIDNRLNRSKLTNILNTIEAEIRLNRFVFKSYFP 61 Query: 67 QSSTGAKMVTTRV--------------------IKTFGELCDIWTKIKETELTTNTMKKT 106 SS ++ + I TF E W + N ++ Sbjct: 62 SSSRCSQFSEYDIRVQQHLAENVEPLTVNIMSNIPTFEEFVGEW-------VVENKIQWK 114 Query: 107 KSQLKTLRIII-CESTP-ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNY 164 KS K +++II C P HIR ++I R L+ D S + G T + +++ Sbjct: 115 KSHCKNIQMIIECYLLPAFGHIRLNEIT--RPSLIKFRASIAD---SRRTGTTEKLSNDW 169 Query: 165 IALLCSLLRFAYQSG---FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL 221 I + + LR F PF +K L+ ++ +P S E +E + +N Sbjct: 170 INHVMTPLRGILNEAALRFDFPTPFVNIKPLRIDKTVIEPFSLAEVQYFLEHIRDDFRNY 229 Query: 222 WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMF-GPPKTNAGIRTVTLLQPA 280 + ++ +R E+ L W+ V+L++ + ++ T++D + PKT+A R++ L QP Sbjct: 230 YTVRFFTAMRTAEIDGLKWQFVNLDRYEILIQE--TLVDGYVETPKTSASYRSIQLSQPV 287 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW 340 ++ALK Q K+TG+ +VF CN P + W Sbjct: 288 VDALKRQRKVTGNKT--------------------YVF----CNASGNPLEHRNVTKRIW 323 Query: 341 NAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 A+ ++RR PY TRHT A L AG NP +IA QMGH T +M++E+Y ++ Sbjct: 324 YPALDEMCLKRRRPYQTRHTCATLWLAAGENPEWIAKQMGHSTTKMLFEVYSRYV 378 >UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae RepID=A9BYB6_DELAS Length = 375 Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 117/400 (29%), Positives = 182/400 (45%), Gaps = 51/400 (12%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 GV +R +Y++I G RE L+ + T +NI+ A +RA I+ +I G F FP Sbjct: 3 GVIVRDKYLQIDLRAHGF-GRERLE-LQPTPANIRHAERMRAEILGKIERGTFVLGDYFP 60 Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 S V + T G+L W +K+ EL +T+ + + +S + Sbjct: 61 DSPRARADVPS---MTVGQLFGEWLDVKKPELQHSTIHSYQQTI--------DSYHFDGV 109 Query: 127 RYSDILNYRNELLHGETLYLD-NPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 R + N+ L L NP+ T +N ++L +L + Y++ ++ Sbjct: 110 RRDLVGNFTFRSLKRLLARLPANPK---------TFNNVASVLRQVLEYGYKAKILTEPL 160 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVD 244 E ++ +R + +PDP + E L+ K ++ +N ++FA +SGLR EL AL W VD Sbjct: 161 HESIEMRRRQKPEPDPFTLDEVEVLLSKMKAEAARNYFEFAFFSGLRPSELIALTWSKVD 220 Query: 245 LEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 L G V V LT + G + +R V L A +AL+ Q K++ Sbjct: 221 LRSGTVMVDSALTRGRVKG--TKTSEVRKVELPGRARDALERQRKVS-----------QL 267 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW 364 GR VF+ V G+ + + L + W A+K +GIR R+ TRHT+A Sbjct: 268 AGGR--------VFL-TVAGGELE--NTDMPLDSWWKPAMKVSGIRHRDARQTRHTYATM 316 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWID--DMNDEQ 402 +L AG PA+ A QMGH +M Y WID D EQ Sbjct: 317 MLMAGVTPAYAARQMGH-GIEMFLRTYSKWIDGADKGAEQ 355 >UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanella RepID=A3D4Z5_SHEB5 Length = 392 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 99/399 (24%), Positives = 170/399 (42%), Gaps = 62/399 (15%) Query: 19 FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQS---------- 68 F ++G RCRE + T +N +K L ++ ++ +G F+Y FP S Sbjct: 15 FRYKGVRCREQTSLAD-TPANRQKLNKLLLMLEQQMKAGSFDYRHHFPNSPKVEHFTQLA 73 Query: 69 ------STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 + G +M+ F ++W K E + ++ + L+ I + Sbjct: 74 KLSQFHAAGGRML-------FSAFANLWLDEKRVEWRASQIETVEGILRCHLIPAMGTKM 126 Query: 123 ISHIRYSDILNYRNELLHGETL---YLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 I+ I DIL R L + L L R N +R + N A RF +Q+ Sbjct: 127 IATICKQDILGLRLSLCEVDALTNRSLSASRINHIMTYLRLILNEAAE-----RFGFQT- 180 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALA 239 P+ +K L R P S E ++ES + + + ++G+R GE+ L Sbjct: 181 -----PWRNIKALPMPRTDIQPFSLVEVYRIIESVRDDFRPYYTVRFFTGMRTGEIDGLT 235 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 WE++D ++++R++L + G KT++ R + + QP EAL+ Q +LT Sbjct: 236 WENIDFTNRLIHIRQSL-VRGSLGLTKTSSSDRAIAMNQPVYEALQAQSELT-------- 286 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 K + FVF CN + + W ++ + +RNPY TRH Sbjct: 287 -----------KIRGKFVF----CNRRGDALSHQNVTKRVWYPLLESLALEKRNPYQTRH 331 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 T A L AG +P +IA Q+GH M++ +Y ++ ++ Sbjct: 332 TAATLWLAAGESPEWIARQLGHANTGMLFRVYSRYVPNL 370 >UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1ZMG0_PHOAS Length = 391 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 109/411 (26%), Positives = 177/411 (43%), Gaps = 58/411 (14%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 + R + I F +RG RCRE + + T N K+ L I EI G FEY + F Sbjct: 3 SINTRNGKLVIDFRYRGLRCREQTQLAD-TPHNRKRLTLLANKIEAEITLGCFEYQKYFS 61 Query: 67 QSS-------------TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTL 113 QS ++ E DIW K+ E + ++ Sbjct: 62 QSKLCEKFRAMEHRERASSQYYNAPYSPNLAEFADIWLAEKKIEWSKGHYIDVSGVIEKY 121 Query: 114 RIIICESTPISHIRYSDILNYRNELLH-----GETLYLDNPRSNKKGRTVRTVDNYIALL 168 + + IS I IL +R+ L GE YL + R N +R + N A Sbjct: 122 LLPAFGNQKISSITKQKILKFRSILSQVPGRKGE--YLSSSRINHIMTPLRQLLNEAAD- 178 Query: 169 CSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYS 228 R+ + S P++ +K L+ +R DP E + + + + + ++ Sbjct: 179 ----RYDFNS------PWKNIKALKVSRTVIDPFHLDEVESFLNAVPDAYKTYYTTRFFT 228 Query: 229 GLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQY 288 G+R GE+ L W+D+DL + V++ L+ + KT + R + L+ ++ L++ Sbjct: 229 GMRTGEIDGLQWKDIDLVNKTIKVKQALS-RNELKELKTESSYRDIDLIDRVIDVLQK-- 285 Query: 289 KLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPY-YSVSSLGARWNAAVKRA 347 H++S+ T FVF+ N K KP+ Y V S W + A Sbjct: 286 -----HKRSKYT------------TSTFVFI----NSKGKPFCYPVVSRTI-WYPTLDAA 323 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 G+R RNPY TRHT+A LL +G +P +IA QMGH T M++ +Y ++ ++ Sbjct: 324 GLRHRNPYQTRHTYATLLLASGESPEWIAKQMGHSTTTMLFRVYSRFVPNL 374 >UniRef50_Q2T7M7 Bbp50 n=13 Tax=root RepID=Q2T7M7_BURTA Length = 356 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 101/382 (26%), Positives = 161/382 (42%), Gaps = 46/382 (12%) Query: 36 TNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE 95 T +N+K A L I I G F + FP+ T ++ G+ D W + Sbjct: 3 TPANVKYARRLAIEIRSRIRHGTFSMVEYFPEDGTTTSLL-------LGDWLDRWLAAQR 55 Query: 96 TELTTNTMKKTKSQL-KTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKK 154 E +T T + K + ++ P+ + + +T+ + +N+ Sbjct: 56 IEKSTKDGYTTAIKFWKETPRDLGQTRPLGGVSIKSL----------KTIDIQTAVANRP 105 Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM--- 211 T +T++NY+++L S L A + I P + V + + PDP S E N+++ Sbjct: 106 DLTGKTINNYLSVLRSALSLAVKDKLIVESPADAVPPAKHQKQPPDPFSAEESNSIIACA 165 Query: 212 -ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAG 270 S GQ N+ +F ++GLR E+ L W VD G + + + + KT Sbjct: 166 ERSYPGQVHNVTEFWFWTGLRTSEIYGLEWPHVDFASGTLLIAKAFVRGEQMDRTKTKVA 225 Query: 271 IRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPY 330 R V L AL AL+ Q T + F+ Y + F ++ Y Sbjct: 226 -RLVILNSRALAALQRQRAFT--QMANGRVFHDPRYNEGWADEDAF----------RRTY 272 Query: 331 YSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEI 390 W +KR GIR R PY+ RH++A +L AG PAF A Q+GH + +M Sbjct: 273 ---------WEPMLKRLGIRYRRPYNMRHSYATAMLMAGMTPAFCAKQLGH-SVEMFLTT 322 Query: 391 YGMWID-DMNDEQIAMLNARLS 411 Y WID D ND ++A L +S Sbjct: 323 YSKWIDGDQNDLEMARLERAIS 344 >UniRef50_B1J5J4 Integrase family protein n=4 Tax=Pseudomonas RepID=B1J5J4_PSEPW Length = 396 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 113/408 (27%), Positives = 177/408 (43%), Gaps = 52/408 (12%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEF---E 60 LP GVE+ GR IRI F + KRC ETL + T I A +LRA + G + Sbjct: 8 LPAGVELVGRSIRIRFTWNKKRCCETLPLPQ-TPKGIAAAASLRAQVKGLDKLGALTAEK 66 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Y FP +T + +V + F + W + ++ T K +S L+ + Sbjct: 67 YAELFP--NTRSVVVHEQTTPIFFDYAQDW--LNSLQIVEGTRKNYRSALQVYWVPYLAD 122 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 PI I + N++ + +KG + LL S+ + A Sbjct: 123 KPIDTITSVLLRKIMNDIKWTSPV-------RRKG--------VVGLLVSIFQQAVTDEL 167 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALM----ESEKGQSQ---NLWKFAVYSGLRHG 233 I P + + + + DP +K E ++++ E+ G + ++F Y+G+R G Sbjct: 168 IVRNPALSIPGAKVPKREVDPFTKEEADSIIAHLYETTSGMTAIYAAYFEFCFYTGMRPG 227 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 E+ AL W ++D NV R + I + R V L AL AL++ LT Sbjct: 228 EVMALRWSEIDRRVKTANVCR-IQIRGVIQDRTKTKRSRKVLLNDRALHALEKARPLT-- 284 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYY-SVSSLGARWNAAVKRAGIRRR 352 + + +VF P + + + S +S W AA+++ GIRRR Sbjct: 285 -----------------EARSDYVFAPSGTGDRSEMFIRSETSQKRYWLAALRKLGIRRR 327 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND 400 Y TRHT+A L AG NPAFIA+Q+GH + Q++ Y WI+ ND Sbjct: 328 RMYDTRHTYATMCLMAGMNPAFIAAQLGH-SVQVLLSTYAKWINSPND 374 >UniRef50_A1TPL3 Phage integrase family protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TPL3_ACIAC Length = 403 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 111/418 (26%), Positives = 173/418 (41%), Gaps = 46/418 (11%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 GV RG I + F + GK+ TL T +N+K A LRA IV EIN G+F + FP Sbjct: 9 GVRPRGNRIEVRFTWEGKQVSPTLD-LRPTAANLKHAARLRATIVEEINQGKFRFAEHFP 67 Query: 67 --QSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPIS 124 ++ T + T + F + +W ++ L ++ L + + P Sbjct: 68 DYKNLTAVQPATDEESRLFRDWAKVWGRLSARGLEHSSHAVYLRHLAAYWLPVFGHLPPE 127 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKK-GRTVR-----TVDNYIALLCSLLRFAYQS 178 I + +L +L PR ++K G+T R T +N + L + ++ Sbjct: 128 RITHVMVLERLADL--------SAPRLDEKTGKTRRALARKTQNNILIPLRGVFELICKA 179 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLW----KFAVYSGLRHGE 234 P +G+ + + PDP S E ++ + + Q+ + W +F+ ++G R E Sbjct: 180 RTEVVDPTDGIDNQKVQKAMPDPFSPDEVEVILRALEEQAGSTWADYFEFSFFAGFRASE 239 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 AL WEDVD V R + KTN R V L A A++ Sbjct: 240 QIALLWEDVDHRSRTALVWRTRVLTKDKDRTKTNVE-RQVELNDRAYNAIR--------- 289 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 R+ RTE + P KP+ S W AA+++AG+R R P Sbjct: 290 ---------RQRARTEAAGREVFWNPNTG----KPFIDEQSQRRVWRAALRKAGVRYRAP 336 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN-DEQIAMLNARLS 411 R T L AGANP ++A Q GH + Q++ Y WI + A +NA +S Sbjct: 337 KECRDTSVTLALMAGANPMWVALQHGH-SVQVMMRDYAKWIPSADRGANRAAVNAAIS 393 >UniRef50_Q7N1I7 Similar to bacteriophage integrase n=8 Tax=Enterobacteriaceae RepID=Q7N1I7_PHOLL Length = 352 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 110/383 (28%), Positives = 169/383 (44%), Gaps = 62/383 (16%) Query: 34 EITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKI 93 E+T NIK A I ++I F Y FP SS +T + D + KI Sbjct: 2 EVTPKNIKYAERKLGEIYNKIERDIFIYAEFFPNSSRLKIFGNVNKGRTIKDYLDEYLKI 61 Query: 94 KETE----LTTNTMKKTKSQLKTL-RIIICESTPISHIRYSDILNYRNELLHGETLYLDN 148 ET T N KK K+ L L +I + E TP IL + Sbjct: 62 CETRNLSPSTINGYKKCKTALSELHKIPVVELTPA-------ILKTWIQ----------- 103 Query: 149 PRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV--KKLQRNRIKPD------ 200 K+ ++T+ N ++ L S + A IS P V + Q RI+ D Sbjct: 104 ----KRSTALKTIRNNLSFLRSAIDEAVTDCLISMNPVNLVTASRYQTERIENDSEYIVD 159 Query: 201 PLSKTEFNALMES---EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT 257 PLS E AL+ + ++ Q +NL+ FA+++GLR EL AL W+D+D +V ++ Sbjct: 160 PLSPNEVTALLSAAGNKQKQWENLFLFAIHTGLRSSELCALRWQDIDFIGKTAHV-QSAK 218 Query: 258 ILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 ++ + KT AG R V L A+ AL Q T K + F + G Sbjct: 219 VVGIIKGTKTKAGTRKVELNTDAMSALLNQKAFT--FMKGNVIFEDPKTG---------- 266 Query: 318 FMPRVCNGKQKPYYSVSSLGAR-WNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 + + ++ + W +++AGIR RNPY TRHTFA ++ G N ++A Sbjct: 267 ----------EAWAGADAIRKKAWVPTLRKAGIRYRNPYQTRHTFATKHISQGVNLFWLA 316 Query: 377 SQMGHETAQMVYEIYGMWIDDMN 399 +QMGH+ +M++ YG ++ D + Sbjct: 317 AQMGHKGPEMLFRHYGSYLKDYD 339 >UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales RepID=C5T6H4_ACIDE Length = 501 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 104/412 (25%), Positives = 171/412 (41%), Gaps = 64/412 (15%) Query: 19 FMFRGKRCRE-TLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKM--- 74 F F+G RCRE TL T +N KK + A I EI +G F Y FP S A++ Sbjct: 17 FRFQGDRCREQTL--LSDTPANRKKLEKVLAKIEAEIAAGTFVYANYFPNSKALARLEKA 74 Query: 75 -----------VTTRVIKTFGEL----------------CDIWTKIKETELTTNTMKKTK 107 V T G L W + + E + ++ Sbjct: 75 AGQAVQIAVAPVGVEAQHTAGPLKVEAEPASPTPPFSTFALQWVEEHKIEWRRSHLRSLM 134 Query: 108 SQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIAL 167 S L I + +S I SDIL +R TL R +K+G + + ++ I Sbjct: 135 STLNGRLIPHFKEKAVSQITKSDILTFR------ATLAKVKGRGDKEGLSPKRINEIIGT 188 Query: 168 LCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVY 227 L ++ A F T P GVK+L+ + DP S + +++ + + ++ + + Sbjct: 189 LGQIMDEAADR-FEFTSPMTGVKRLRVRKTDVDPFSLADVQSILTTVRADYRDYFTTRFF 247 Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQ 287 +G+R GE+ L W VD E+ ++ VR +L KT+ R + + QP +AL Q Sbjct: 248 TGMRTGEVHGLKWRYVDFERRLILVRETF-VLGEDEYTKTDGSQRDIQMSQPVFDALLRQ 306 Query: 288 YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA 347 + TG + S+ F CN +P + + W ++ Sbjct: 307 REATG--KLSDYVF---------------------CNMAGQPLDNKNFSDRVWYPLLRHL 343 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN 399 G+ R PY RHT A L +G P +IA Q+GH + +M++ +Y ++ ++ Sbjct: 344 GLTERRPYQMRHTAATLWLASGEAPEWIARQLGHTSTEMLFRVYSRYVPNLT 395 >UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 RepID=A3JCU8_9ALTE Length = 408 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 98/403 (24%), Positives = 174/403 (43%), Gaps = 61/403 (15%) Query: 19 FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQS---------S 69 FM RG RCRE + T +N K+ L + +I G F Y +FP S Sbjct: 17 FMCRGHRCREQTALLD-TLANRKRVEALLQKVEAKILLGAFNYAEQFPDSRNLNKLKNDG 75 Query: 70 TGAKM--------VTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 +GA + V + D W + + + ++ + S L + ++T Sbjct: 76 SGAGINDEGADPEVNAAQTPYVADFADQWFQESKIQWRSSHTRNVVSILDSSLKPAFKNT 135 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTV------RTVDNYIALLCSLLRFA 175 ++ I +DIL R ++ + ++GR +T+++++ +L ++ A Sbjct: 136 RMAEITKADILAARTKM------------AKRRGRGASGLMAPKTINSHLTILRMIMTEA 183 Query: 176 YQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGEL 235 + F P+ +K L+ R+ +P S E + + + +N ++ Y+G+R GE+ Sbjct: 184 SER-FEFDNPYRNIKPLKLQRVHIEPFSLAEVERICKYVREDYRNYYQLRFYTGMRTGEI 242 Query: 236 AALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 L W +VD EK + VR L I KT+ R + + P EALK Q+ G Sbjct: 243 DGLKWANVDFEKQEILVRETL-IHGKTEYTKTDGSQREIPMFGPVYEALKAQHAAIGKLS 301 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 K FVF CN + +P + W ++ + +R PY Sbjct: 302 K-------------------FVF----CNREGQPLDHNNVTKRVWYPLLEALKLTKRRPY 338 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 TRHT A LL +G NP ++A +GH + +M++++Y +I ++ Sbjct: 339 QTRHTAATLLLASGENPEWVARVLGHSSTEMLFKVYSRFIPNL 381 >UniRef50_A8ZS80 Integrase family protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS80_DESOH Length = 403 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 82/316 (25%), Positives = 132/316 (41%), Gaps = 42/316 (13%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 TFGE+ W I + E+ +T S + + + PI+ I Y D+L +R+ L G Sbjct: 73 TFGEVAKEWASIHKKEVRYSTWPDYVSSMNGHILPNFKDMPIAEITYGDVLKFRSGLKVG 132 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 + +N + + S+ +A + G I +K+L + P Sbjct: 133 ----------------AKRANNILVPMKSVFDYADREGIIQDNVMRKIKRLSEEAPEIHP 176 Query: 202 LSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDV--DLEKGIVNVRRNLTIL 259 S E N L+++ Q A ++G+R GE L W D D++ R + Sbjct: 177 FSYDEVNRLLDAVHPWYQPYLIVAFFTGMRAGEQNGLCWSDFLEDMQPEPRIFIRKTYVY 236 Query: 260 DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM 319 G PKT R + L LEAL EQ KLTG ++ +T R +K Sbjct: 237 KKDGIPKTKKSKRYIKCLPQVLEALSEQRKLTGKNKHIFLTIDGRRMTPDHIRK------ 290 Query: 320 PRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 W A+++AGI R P TRHTFA +L+AG + ++ + + Sbjct: 291 ------------------EVWIPALEKAGIEYRPPIQTRHTFATMMLSAGEDIGWVQNML 332 Query: 380 GHETAQMVYEIYGMWI 395 GH + QM+++ Y W+ Sbjct: 333 GHSSLQMIFQRYYAWV 348 >UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH59_9BACT Length = 390 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 102/408 (25%), Positives = 167/408 (40%), Gaps = 65/408 (15%) Query: 8 VEIRGRYIR--IWFMFRGKRCRETLKGWEITNSNIKKAGNLRALI--VHE----INSGEF 59 + RG+ R ++F + G R E + T N K ++ +HE I+ F Sbjct: 4 IHARGKKNRLYVYFQYLGVRRHEKTPFFCETGKNGCKCRQCKSTAGWLHELECKIDDKTF 63 Query: 60 EYLRRFPQS--STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTL---- 113 +Y FP+S + M + +FG +W ++T + T S + L Sbjct: 64 KYAEYFPESRVAKALPMADSSPQISFGTYAILWLDSQKTVFSHATFITYTSSINNLLATF 123 Query: 114 -RIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLL 172 + IC+ P +HIR Y+ N + K T+ N++ +L S+L Sbjct: 124 ENMSICDIKP-AHIR----------------TYIKNSEVSPK-----TLKNHVGVLSSIL 161 Query: 173 RFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKF---AVYSG 229 A + I P VK + ++ DPLS E ++ K N+ F A ++G Sbjct: 162 SAAVEDDLIPKNPCTSVKLPHISSVEVDPLSLEEITMILNWMKSHHPNMLAFFAVAFFTG 221 Query: 230 LRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 +R GE+ L W D+D + + R +T + KT A RTV +L E L Sbjct: 222 MRTGEIMGLQWGDIDFNSHTITISRTITAGKLKHRTKT-ADSRTVDILTELDEYLS---- 276 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL-GARWNAAVKRAG 348 YH+++ + + L + + KP+ ++ W +K G Sbjct: 277 ------------YHKQFTYMKSEWLFLTY-------ENKPFNKTDNIIKTYWKPCLKALG 317 Query: 349 IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID 396 I+ R Y TRHTFAC +L G N ++ +GH+T M+ YG ID Sbjct: 318 IKYRTLYQTRHTFACLMLDVGENINWLKKMLGHKTLDMILRRYGNRID 365 >UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q12GK7_POLSJ Length = 471 Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 97/402 (24%), Positives = 168/402 (41%), Gaps = 58/402 (14%) Query: 19 FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF----PQS------ 68 F + G+R RE ++ +N K+ I +I G F+Y + F PQ Sbjct: 17 FRYAGQRLREYTMLPDMP-ANRKRLQKALDRIETDIALGTFDYEKTFGKPLPQPEPKTKD 75 Query: 69 --------STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 S G +++ FGE W E + K L + Sbjct: 76 GSVDRTARSDGLPVLSRNGTPLFGEFAQQWFTEVEVSWRRSYRITQKGALDKYLLPFFGD 135 Query: 121 TPISHIRYSDILNYRNELLHGETL----YLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 + HI +D+L +R L T L N R N + +R + N A RF + Sbjct: 136 KEVGHITKADVLAFRASLAKVTTRKSQGTLSNRRVNAVMKPLRQILNEAAD-----RFEF 190 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELA 236 S F + KP K++R+ ++P L + E ++ + + +N + ++G+R GE Sbjct: 191 NSAFRNIKPL----KMKRSDVQPFTLDEVEL--ILNTVRVDYRNYFNVRFFTGMRTGEAH 244 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 L W+ VD E+ ++ VR ++ +L+ KT+ +R + + Q +ALK QY+ G Sbjct: 245 GLKWKYVDFERRLILVRESI-VLNEEDELKTDGSVRDIHMSQVVYDALKAQYQAAGEF-- 301 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 SE F C+ +P + + L WN ++ G+ R Y Sbjct: 302 SEYVF---------------------CSRSGQPINNQNFLNRVWNPLLRHLGLEHRRAYQ 340 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 RHT A L +G P +IA Q+GH + +M++ +Y ++ ++ Sbjct: 341 MRHTAATLWLASGEAPEWIARQLGHTSTEMLFRVYSRYVPNL 382 >UniRef50_A8FW51 Putative pore-forming cytotoxin integrase n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FW51_SHESH Length = 381 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/242 (29%), Positives = 116/242 (47%), Gaps = 11/242 (4%) Query: 159 RTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNAL----MESE 214 +T++ + +L ++ A + P GV+ L+ + +P PL + E L + E Sbjct: 69 KTINEHFTILRAIFSCALSDCVLGRNPMTGVENLKIHTAEPKPLGREELLKLHATPAQCE 128 Query: 215 KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTV 274 G++ L V +GLR EL AL W+ +D E + V +L + PKT + IRTV Sbjct: 129 SGKA--LLFLGVLTGLRISELIALTWDCIDFESREIKVH-TAKVLGKYKVPKTTSSIRTV 185 Query: 275 TLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVS 334 + Q A LK+ Y++TG R I + EK+++ +F+ N KP+ Sbjct: 186 EMNQHAFALLKKHYEVTGSLRPRVIRVLQNDNKTIEKRRVQHLFINSQSN---KPFIDSK 242 Query: 335 SLGARW-NAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGM 393 + + +A ++ R P RHTFA LTAG + +IA Q+GH + MV + Y Sbjct: 243 QYSKTFFTPFLVKASVQHRGPNQLRHTFASQCLTAGISKEWIARQLGHNSTNMVDKHYAR 302 Query: 394 WI 395 W+ Sbjct: 303 WL 304 >UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFZ6_TOLAT Length = 394 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 92/405 (22%), Positives = 170/405 (41%), Gaps = 46/405 (11%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 T V ++ + + F F+G+RCRE G T N +K + +I G+F + + F Sbjct: 2 TSVFVQNDILYLDFHFKGQRCRER-TGLPDTEFNRRKLEKFCKRMDAQITLGQFNFCKTF 60 Query: 66 PQSSTGA--------KMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 P SS + + +F E + W + K+ E T+ + ++ L + Sbjct: 61 PNSSQCEYFHKIAHREELLKAGCPSFAEFAETWYQEKQVEWRTSQRETIRNILDIHLLPS 120 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVD----NYIALLCSLLR 173 P++HI ++IL++RN + + KGR + + N+I ++ Sbjct: 121 FGLMPVNHIGKTEILSFRNYV------------TQLKGRGDKQISASRVNHIMTPLRMIL 168 Query: 174 FAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHG 233 F ++ +K ++ R PL+ E L+ + + + ++GLR Sbjct: 169 NEASDRFDFPAVWKQIKSMKVPRSDVMPLTLAEIERLLLVVRKDFKPYYTVRFFTGLRSS 228 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 E+ L W VD E+ + V + ++ KT+ R V + EAL QYK++G Sbjct: 229 EIHGLTWRHVDFERCQILVYQAYVRGELIST-KTDGSYREVQMSLRVYEALLAQYKMSGQ 287 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 +R + FVF C+ + W + G+ +R Sbjct: 288 NRSID----------------DFVF----CSSVGTALEDRNVANRVWYPLLALLGLEKRK 327 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 PY +RHT A L++G +P +IA Q+GH + M++ +Y ++ +M Sbjct: 328 PYQSRHTTATLWLSSGESPEWIARQLGHVSTNMLFRVYSRYVPNM 372 >UniRef50_Q87MU5 Putative pore-forming cytotoxin integrase n=2 Tax=Vibrio RepID=Q87MU5_VIBPA Length = 370 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 7/240 (2%) Query: 159 RTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEK--G 216 +T++ ++ +L + A + G I+ P GV+ + +P+P +K E + E + Sbjct: 73 KTINEHLTILRRISLKAVRDGVIARNPMTGVQNFKTVDPEPNPFTKKELARMHECKNVCT 132 Query: 217 QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTL 276 Q QN + +GLR EL AL+W+D++ E+ ++ VRR +L+++ PKT +R V L Sbjct: 133 QGQNAVMLNLLTGLRISELIALSWQDINWEREVLYVRR-ACVLNIYKCPKTKGSVREVDL 191 Query: 277 LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL 336 AL+ LKEQ KLTG R I + K + F+F+ N +P+ Sbjct: 192 NPLALKLLKEQLKLTGKRRPQTINILECDNKTFTKDSVSFIFLNTKTN---QPFTDAKEF 248 Query: 337 GARWNAA-VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 R+ +++AG+ R RHTFA LT G + ++A QMGH++ M+ + YG WI Sbjct: 249 TERFFIKFLEQAGVAHRGVGQLRHTFASQCLTTGISKDWLAVQMGHKSTTMIDKHYGRWI 308 >UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DR3_THICR Length = 433 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 99/390 (25%), Positives = 161/390 (41%), Gaps = 48/390 (12%) Query: 19 FMFRGKRCRE--TLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKM-- 74 F + RCRE TL +I N KK + I EI G FEY + FP SS AK+ Sbjct: 17 FSYLKLRCREQTTLHDTKI---NRKKLETILERINAEITLGTFEYGKYFPNSSMLAKIEK 73 Query: 75 VTTRVI----KT--FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 T +++ KT F + + W E T +S L I +S I Sbjct: 74 ATAKLVPGYTKTPLFKDFVEEWFSEMEPTWRKATADGYRSYLDKRLIPHFGEMEVSSITK 133 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 ++IL YR + L + +T++ +I L ++ A + T P Sbjct: 134 AEILKYRAHVAKQSAGKLKS----------KTINKFIKCLNMVMNEA-ADRYDFTPPHLN 182 Query: 189 VKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKG 248 +K L+ ++ DP S E N ++ + ++ ++G+R GE+ L WE VD + Sbjct: 183 IKPLKEEKVHIDPFSIEEVNQILAQVRSDWRDYLLVRFFTGMRTGEIDGLKWEHVDFSRR 242 Query: 249 IVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 + +R + + K + R + + L +++K KSE+ F Sbjct: 243 EILIRETYSA-GRWEYTKNDGSQREIEMSTLVYNTLSKRFK--ERDPKSELVF------- 292 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTA 368 C G P ++ + L W + ++ R PY TRHT A L A Sbjct: 293 --------------CTGNGAPVHTPNFLRRVWRPLLSYLKLKYRKPYQTRHTAATIWLAA 338 Query: 369 GANPAFIASQMGHETAQMVYEIYGMWIDDM 398 G NP +IA QMGH T M++ +Y ++ ++ Sbjct: 339 GENPNWIAKQMGHSTTSMLFTVYARYVPNL 368 >UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBE5_AMMDK Length = 414 Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 95/357 (26%), Positives = 162/357 (45%), Gaps = 43/357 (12%) Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKI-KETELTTNTMKKTKSQLKTLRIIICESTPISH 125 Q+S G R+ T GE W + K+ +L T+ ++ ++ + S P+ Sbjct: 86 QASLGVLTAPARL--TLGEWLATWLETYKKGKLRPTTLANYETVIRAYILPSLGSVPLRS 143 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 + + + N L + +G + RTV +L + L+ A ++G + P Sbjct: 144 VTPASLQALYNSL-------------SARGLSARTVRLVHVVLNACLKQAVKNGLLVRNP 190 Query: 186 FEGVK--KLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWED 242 E + KL+R R+ PL++ E A +++ +G+ + A+ +GLR GE+ L WED Sbjct: 191 AEATEPPKLKR-RVPVRPLAREEVEAFLKAARGERLYPAFALALKTGLRRGEVLGLKWED 249 Query: 243 VDLEKGIVNVRRNLT---------ILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 VDLE+G++ VRR+L + +F PKT RTV L + + LK Sbjct: 250 VDLERGVLRVRRSLVEAKDPETGKVRLVFQEPKTEKSRRTVPLTRDVVALLKSH-----K 304 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 R++E Y E E L F C KP + + L A +++ +K+AG+ R Sbjct: 305 ARQNEEKLYFGEA--YEDNGLVF------CTELGKPIWPRNFLRA-FHSVLKKAGLERHR 355 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RHTFA LL +G + +GHE ++Y ++D + + L+A L Sbjct: 356 FHALRHTFATLLLASGEELKNVQELLGHERISTTADVYAEVLEDAKKKAVTRLDAFL 412 >UniRef50_C3K9Z5 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K9Z5_PSEFS Length = 410 Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 113/416 (27%), Positives = 173/416 (41%), Gaps = 66/416 (15%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE--- 60 LP G+++ IRI FM+ G R ETL + T IK A + + I G + Sbjct: 21 LPAGMDLHHGSIRIRFMWNGSRRSETLP-YPPTQKGIKSASQVVDQVKGLIKLGLLDDDK 79 Query: 61 YLRRFPQSS--TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 Y FP SS G K+ FGE +W + E+ T K L Sbjct: 80 YAELFPSSSNVAGGKI-------NFGEYAQLW--LDSREVVGGTKANYKGALN------- 123 Query: 119 ESTPISHIRY--SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 RY + R +L+ L S K V+ N I+ L ++L A Sbjct: 124 --------RYWMPGLALVRIDLITTTLLRRVMAASEWKSPGVKR--NAISKLSTILNSAM 173 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLW---------KFAVY 227 I P ++ +R++ + DP + E N ++ K + W +F + Sbjct: 174 SEELIPKNPAAILELPKRSKKEIDPFTLEEANLIIA--KMYEHDHWPSTIYAAFFEFVFF 231 Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQ 287 +G+R E A+ W++VD +K +V R + + ++ KT G R V L AL AL Sbjct: 232 TGMRLSEALAMRWDEVDEQKKTAHVCRGVALGEVVERTKT-GGDRFVLLNDRALHALD-- 288 Query: 288 YKLTGHHRKSEITFYHREYG-RTEKQKLHFVFMPRVCNGKQKPYY--SVSSLGARWNAAV 344 + +EY R +K K + P + + Y S L +W + Sbjct: 289 --------------FAKEYAERRKKGKGKVLETPYIFPPSKNAAYVRQTSDLHKQWVPTL 334 Query: 345 KRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND 400 K IRRR PY+ RHT+A + +G NPAFI+ Q+GH + QM+ Y WI+ +D Sbjct: 335 KALNIRRRPPYNCRHTYATICIMSGMNPAFISQQLGH-SVQMLLSTYARWINSSSD 389 >UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6GR01_9BURK Length = 450 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 37/279 (13%) Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG--F 180 IS I D+L +R+ L KK T + ++ S+ + ++ F Sbjct: 111 ISSITKQDLLEFRSVLAKA---------PGKKPGTTMSASRINHVMTSVKQVLDEAADRF 161 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAW 240 T P++ +K+++ + P + E +++ + ++ + ++G+R GE+ L W Sbjct: 162 NFTTPYQNIKRMRIKKTDVTPFTIEEVEMIIKYCREDFRDYFTVKFFTGMRPGEIHGLKW 221 Query: 241 EDVDLEKGIVNVRRNLTILDMFGP-PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 + +D EK ++ +R TI+D + PKT R + + EALK Q+ +TG KS Sbjct: 222 KYIDFEKRLITIRE--TIVDDYEETPKTADSNRDIQMAPQVYEALKAQWGVTGT--KSPY 277 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 F + CNG P + + W ++ G++ R PY TRH Sbjct: 278 VFAN-------------------CNGG--PLTNRNMSNRVWYPMLRSLGLKLRTPYQTRH 316 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 TFA +L AG +P +IA QMGH + +M++++Y ++ ++ Sbjct: 317 TFATLMLAAGESPEWIAFQMGHSSTEMLFKVYSRYVPNL 355 >UniRef50_D1B215 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B215_SULD5 Length = 338 Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 29/244 (11%) Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE 214 G++ ++++ Y + LL+ A IS+ PF +K+ + P SK+E L+E Sbjct: 106 GKSAKSIELYRTVFSGLLQEALFDNVISSNPFVNIKRKPIQKPVITPFSKSEVRLLLEES 165 Query: 215 KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTV 274 +G QN A Y+GLR GE+ L W D+ +++VRR + PKT +R V Sbjct: 166 EGWLQNYIAVATYTGLRSGEIIGLKWNDI--SHNVISVRRTRD-FNRDTKPKTLNSMRDV 222 Query: 275 TLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVS 334 L + L Q K+TG + +VF+ R +KP+ Sbjct: 223 PLFEGLKPFLDNQRKITG--------------------QCEYVFVRR----DKKPWSDTQ 258 Query: 335 SLG-ARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF-IASQMGHETAQMVYEIYG 392 ++ A W + R G++RR Y RHTFA +L +G IA +GH T + ++ +Y Sbjct: 259 NISCAYWYPLLDRLGLKRRRLYEMRHTFATNMLNSGKYKVTDIAQMLGHSTTEYLFNVYS 318 Query: 393 MWID 396 +I+ Sbjct: 319 RYIE 322 >UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH28_9BACT Length = 410 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 98/394 (24%), Positives = 166/394 (42%), Gaps = 49/394 (12%) Query: 19 FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTR 78 F + RCRE L + + A L+ I G FEY FP S + R Sbjct: 22 FYYSDVRCREYL-SVQANKEGRRYAERQAKLLEQAILDGNFEYAEWFPNSKKCRLFNSVR 80 Query: 79 -VIKTFGELCDIWTKI-----KETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDIL 132 KTF E+ + W + K EL T++ + LK++ + + +I S + Sbjct: 81 KSHKTFAEVAEEWKEHVERLHKAGELKRTTLRNYMNSLKSI-LDYFAIYEMQNITKSLVD 139 Query: 133 NYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL 192 +Y+ ELL D P S K +++N + L + +AY+ G+I + VK Sbjct: 140 DYKFELL-------DKPLSKK------SINNKLTPLRRIFDYAYEMGYIEHNVMDRVKNF 186 Query: 193 QRNRIKPDPLSKTEFNALM---ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 + +P ++ E A++ + + ++ ++G+R GE+ A+ W++ D Sbjct: 187 TLELPEIEPFNQLEVQAILNHLQKNNPKFHAMFTILFHTGMRIGEVLAMKWKNFDEMFCS 246 Query: 250 VNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 +V+ + T PKT A R V L A++AL+ H++Y Sbjct: 247 YHVKEHFT-EKRLDTPKTKASKRIVPLTDEAMKALRN----------------HKQYTFM 289 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKRAGIRRRNPYHTRHTFACWLLTA 368 K F+F CN P+ S ++ + W +K+ GI R Y RHT A + A Sbjct: 290 ---KSDFIF----CNQYGDPWVSSDNIMKQVWEPMLKKLGIAYRIIYQCRHTHASLSILA 342 Query: 369 GANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQ 402 G N A IA +MGH+ + Y ++ + +Q Sbjct: 343 GDNLAHIAERMGHKNVGTLITRYAKYVKSVQFQQ 376 >UniRef50_Q30S15 Phage integrase n=2 Tax=Campylobacterales RepID=Q30S15_SULDN Length = 393 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 38/253 (15%) Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVK--KLQRN-RIKP-DPLSKTEFNALMESEK 215 TV + ++L S+ A + + P E V K+Q N +I+ +P ++ E N ++E Sbjct: 142 TVQKFRSILFSIYDKALHNDLVLKNPLEKVTAPKVQNNIKIEEINPFTEKELNQIIEHAN 201 Query: 216 GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL-------TILDMFGPPKTN 268 G +N K +G+R GE+ AL W D+D EK + V R I+D G K Sbjct: 202 GYMKNFIKLMAATGMRPGEIIALKWSDIDFEKRTIKVERTRLRAKKGEDIVD--GLTKIK 259 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 + R V +L ++L Q +LT + SE F N Sbjct: 260 SSNRFVDMLNATHDSLMAQLELTSN---SEYIF---------------------LNQSNM 295 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 P+Y+ +G + +K++G++ R Y+ RHTFA +++ GA+ +++ +GH+ + Sbjct: 296 PFYNHDIIGVNFRKILKQSGVKARPLYNLRHTFASQMISKGADITWVSKMLGHKDVSITL 355 Query: 389 EIYGMWIDDMNDE 401 +IY +I + +DE Sbjct: 356 KIYTKFIQE-DDE 367 >UniRef50_C0VGS2 Phage integrase n=2 Tax=Acinetobacter RepID=C0VGS2_9GAMM Length = 402 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 118/430 (27%), Positives = 180/430 (41%), Gaps = 78/430 (18%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSG------ 57 LPTG R I+I F + GKR TL T +N KA +R V++ G Sbjct: 9 LPTGTRARSGKIQINFKWNGKREWFTL-ALTDTPANFSKAAKIREDFVNKAKYGILKIED 67 Query: 58 -EFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRII 116 E ++ F ++ + + TF + + ++ T KK S L+ L + Sbjct: 68 IEAVTVKPFKKADAAQESLPASHGPTFAQYAQEYL-YNLSDHKHGTKKKYLSILERLWMP 126 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGR---TVRTVDNYIALLCSLLR 173 + PI+ I S +L RS GR + +T ++ + L Sbjct: 127 LFADMPINTIS-SQML-----------------RSAVNGREWSSAKTRNDALIPLRGAFE 168 Query: 174 FAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTE----FNALMESEKGQSQNL-WKFAV-- 226 A I P + +K + +PDP ++ E N L E + W F V Sbjct: 169 LANDDEIIDKNPCDRLKNQKTQETEPDPFNEIERERILNWLREKYLADYPTVYWYFVVAF 228 Query: 227 YSGLRHGELAALAWEDVD-------LEKGIVN-VRRNLTILDMFGPPKTNAGIRTVTLLQ 278 ++G R E+ AL W+DVD + KG VN V++ T KTN R V L Sbjct: 229 WTGCRPSEIIALTWQDVDFLNKQIHINKGRVNGVQQETT--------KTNKA-RFVDLND 279 Query: 279 PALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA 338 A EA ++ LT + K E F +C+ + + + SL Sbjct: 280 FAFEAFQQLRLLT--YLKYEHVF--------------------ICDETGEEFTTQKSLSE 317 Query: 339 RWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID-D 397 ++ AA+K GIR R Y+TRHT+A L G NP ++ASQ+GH M+ + Y WI+ D Sbjct: 318 KFVAALKANGIRYRPAYNTRHTYATVCLMNGLNPVYVASQLGHSLV-MLMKRYAKWINSD 376 Query: 398 MNDEQIAMLN 407 N E+IA ++ Sbjct: 377 KNKEEIAKIS 386 >UniRef50_D0S8U2 Phage integrase n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0S8U2_ACIJO Length = 386 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 96/408 (23%), Positives = 174/408 (42%), Gaps = 62/408 (15%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 +PTGV IR I+I+F R K TL + I A +RA +V + G Sbjct: 10 MPTGVRIRNGAIQIYFERRKKEYNITLPH-PPSAEGISAAAKIRAQLVTKAEWG------ 62 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI 123 + + + + G+L D + + + + K L+ CES Sbjct: 63 ---------ILTDSDIAEARGQLVD-----DDAVIVNGGILFQEVAQKYLKF--CESNTD 106 Query: 124 SHIRYSDILNYR----NELLHGETLYLDNPRS---NKKGRTVRTVDNYIALLCSLLRFAY 176 + Y +IL + L+ ++ ++N + ++ +T +T++N + L + A Sbjct: 107 TKKGYLNILEFHWMGYFALMPINSISIENIKEAIIDRDFKTAKTLNNCLIPLRGVFDCAM 166 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQN-------LWKFAVYSG 229 ++ FI+ P + ++ + PDP S+ E +A++E+ K + ++ A ++G Sbjct: 167 ENKFITENPLDSIRNKKVQVDIPDPFSRPEMDAILENLKTTLKGDEILYYWYYELAFWTG 226 Query: 230 LRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 R EL AL D D G+ V ++ + + VT A E Sbjct: 227 CRPSELIALKESDFDFFSGMFKVNKS----------RVRGVEKNVTKTHTAREVC----- 271 Query: 290 LTGHHRKS--EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA 347 L +K+ E+ Y ++ K + +C +P+++ R AA+K Sbjct: 272 LNARSKKAAQELIKYKKDRNIQSKYLM-------LCPETGEPFFNEKPPRNRLVAALKAC 324 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 GIR R Y+ RHT+A +L G NP F+++QMGH + QM+ + Y W+ Sbjct: 325 GIRHRPAYNARHTYATMMLMDGLNPVFVSNQMGH-SLQMMMKRYAKWM 371 >UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSV7_BACS4 Length = 391 Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 97/384 (25%), Positives = 167/384 (43%), Gaps = 44/384 (11%) Query: 35 ITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIW-TKI 93 IT N +A A V EI +GE+ +KM F + W TK Sbjct: 34 ITAKNKTEAKKRLAEFVTEIEAGEY---------IDPSKM-------KFKDFVKEWETKY 77 Query: 94 KETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNK 153 L T++ KS + I + + + +I+NY + L GE DN R + Sbjct: 78 GMKHLGAKTLETYKSIINNYLIPTFGNKKLDEFKPINIINYLDCL--GE----DNARKDG 131 Query: 154 K--GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM 211 K G + ++ + +L ++ A + I P E VK + + K +K E L+ Sbjct: 132 KEGGLSSSSIKYHYRVLRNIFSRAKEWIIIKNNPVESVKPPKVTQEKTSVYTKDEVIELL 191 Query: 212 E---SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGP 264 E +E + + A+ +GLR GE+ L W+D+DL+ G +++ +L + GP Sbjct: 192 ELLKNEPIHQKLMVTAALMAGLRRGEILGLQWDDIDLDAGTISINHSLQYTKEKGYVLGP 251 Query: 265 PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCN 324 PK N+ IR V++ +E K+ + R + E K +VF N Sbjct: 252 PKNNSSIRKVSIPMYLVEEFKKYKRTKSKERIQAAELW-------EGGKYFYVFSS--WN 302 Query: 325 GKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETA 384 GK P+Y +++G W +KR G + + RHT A L+ G + I++++GH Sbjct: 303 GK--PFYP-TAVGTWWRRFLKRKGFKYIRFHDLRHTAATLLINEGEHAKTISARLGHADI 359 Query: 385 QMVYEIYGMWIDDMNDEQIAMLNA 408 + IYG ++ + +++ LN+ Sbjct: 360 KTTMNIYGHYLREADEKAANKLNS 383 >UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8K7_9ACTO Length = 377 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 79/276 (28%), Positives = 123/276 (44%), Gaps = 31/276 (11%) Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 S P+ +R S++ E L L R+ +VRT+ A+L + L A + G Sbjct: 108 SLPLDRLRPSNV----------EALVLAKRRAGLSASSVRTI---YAVLRAALDVAVRDG 154 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAAL 238 I P VK+ R LS + AL+E+ +G + L++ + +GLR GE AL Sbjct: 155 LIQRNPAALVKRPAVERKDAGYLSAQQAEALLEAVRGDRLEALYRVMLATGLRRGEALAL 214 Query: 239 AWEDVDLEKGIVNVRRNLTILDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 W DVDL+ +V VR L+ G PKT RTV L PA+E L+ K + Sbjct: 215 HWRDVDLDAAVVRVRWTLSRTSAGLELGEPKTEKSRRTVPLPVPAVETLRAHRKRQAAEQ 274 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 + + + Q VF + P + L R+ A +RAG+R + + Sbjct: 275 LAAGSLW---------QASGLVFTSEIGT----PLEPRNVL-RRFEALAERAGLRGVHLH 320 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 RH+ A +LL AG + + +GH + + +IY Sbjct: 321 TLRHSAASFLLAAGTHTKVVQEHLGHSSYAITADIY 356 >UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0S2_9CLOT Length = 376 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 91/338 (26%), Positives = 144/338 (42%), Gaps = 66/338 (19%) Query: 89 IWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDN 148 + +K++ T K K Q+K L I + + HI+ +I++Y + L+ Sbjct: 84 VANDLKDSTYTNYKQKLNKPQIKVLEIYLLKDIRAKHIQ--NIIDY---------MALNG 132 Query: 149 PRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFN 208 N T+RT+ SL F ++ I P + V + P L++ E Sbjct: 133 FSKNMVKNTLRTI-------SSLFNFCIRAELIKDNPCDKV-------VLPSKLTQPERK 178 Query: 209 -ALMESEKGQSQNLWK---------FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 AL E + N +K +Y+G+R GE L W++VDL+KGI+ VR NLT Sbjct: 179 VALTNKEVKRILNRFKNTHWYLSLMLPLYTGMRRGECCGLRWKNVDLDKGIIYVRENLTQ 238 Query: 259 LD----MFGPPKTNAGIRTVTLLQPALEALK---EQYKLTGHHRKSEITFYHREYGRTEK 311 + PKT + IRT+ + P LEALK E+ K S+ R+ G Sbjct: 239 DKGKKWIISTPKTKSSIRTINIPLPLLEALKWQLERNKSNNVATNSDTHVLVRDNGSIIT 298 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT-RHTFACWLLTAGA 370 ++ RV N LG ++N YH RHT+A L+ GA Sbjct: 299 NDT-LKYLSRVIN---------YDLGIKFN-------------YHNLRHTYATLLIEKGA 335 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 N ++ +GH + + +IY D+M D+ + +LN Sbjct: 336 NIKDVSVLLGHASIKTTMDIYVNNTDNMRDKTLNILNT 373 >UniRef50_Q17VL1 Bacteriophage-related integrase n=4 Tax=Helicobacter RepID=Q17VL1_HELAH Length = 378 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 29/243 (11%) Query: 166 ALLCSLLRFAYQSGFISTKPFEGVK-KLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWK 223 A L S L F G++ P+ V K + K +P S E A++++ S + Sbjct: 159 ANLKSFLAFCESEGYLEKNPYFAVTLKNAKEAKKIEPFSLEEVEAIIKNAPSLSLKAFLM 218 Query: 224 FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEA 283 A +G+R GE AL WED+D + +++ ++L PK +R V LL+PA + Sbjct: 219 VAFLTGMRTGEQLALTWEDIDFDHQTISINKSLNEWGQITSPKNQNSVREVDLLEPAAKI 278 Query: 284 LKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAA 343 LKE +KSE +K F+ MPR S R+ Sbjct: 279 LKEL-------KKSE----------PAGKKFVFIGMPR----------RTSVFQRRFREL 311 Query: 344 VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 +K ++ R Y TRHTFA +L+ G P +++ +GH+ Y Y +I + E+ Sbjct: 312 LKALDLKDRKLYTTRHTFASLMLSQGEEPMWVSKMLGHKDLNTTYGAYSHYIPQQDRERA 371 Query: 404 AML 406 L Sbjct: 372 KFL 374 >UniRef50_B4RWG8 Phage integrase n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RWG8_ALTMD Length = 292 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 35/247 (14%) Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVK-------KLQRNRIKPDPLSKTEFNALME 212 T+++ +L + A G I+ P G K + + + K P + TE L Sbjct: 51 TLNSTFKVLRAAFSEAVVDGTITNNPLLGFKISSAVKRRKSKQKDKVQPFTLTELKKLAA 110 Query: 213 SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN-LTILDMFGPPKTNAGI 271 + + + + +GLR GEL AL WE VDLE+ +N+ N +T G PKT A Sbjct: 111 FQDLRERTYIQVWAKTGLRSGELCALRWEHVDLERKTINIDENYVTYAKELGTPKTEASE 170 Query: 272 RTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK-PY 330 RT+ L + + L+ E KL FVF N + K + Sbjct: 171 RTIQLDEETVSLLQ----------------------ILEPGKLPFVFH----NSRSKREH 204 Query: 331 YSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEI 390 + SL G+ R+PY+ RHT+A ++ G N IA QMGH + +M++E Sbjct: 205 FDTYSLRRLLIKMCDECGVSYRHPYNLRHTYATMRISLGHNLWDIAKQMGHTSPKMLFET 264 Query: 391 YGMWIDD 397 YG +I++ Sbjct: 265 YGDYIEE 271 >UniRef50_B7WQQ6 Integrase family protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQQ6_COMTE Length = 429 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 105/411 (25%), Positives = 162/411 (39%), Gaps = 49/411 (11%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWE-----ITNSNIKKAGNLRALIVHEINSGEFEY 61 GVE+R IRI RG + L + T N+ A L I +I G +E+ Sbjct: 13 GVEVRDASIRIRINMRGTSVIQRLNAPDGSALLPTLQNVMYATQLVTKIKADIRLGTYEH 72 Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 F + ++ T+ I T E D W +L +TM+ R E T Sbjct: 73 ENYFATENLTSE---TKPIPTLIEQIDHW--FNTLDLAKSTMRGYAVCCNFWRRTTIEVT 127 Query: 122 P-------ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRF 174 + ++ +DI + L H L R + +T +NY++ + S L Sbjct: 128 VGRGKKARVEEVKIADIPLDKLALSH-----LQLARKKASALSGKTFNNYLSAVSSALAL 182 Query: 175 AYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM----ESEKGQSQNLWKFAVYSGL 230 A Q G ++ + + + DP S E N+++ E + NL +F +GL Sbjct: 183 AVQDGILTEAVSTARAHKKWQKKQADPFSLNEINSIVSYMRERYDERIANLVEFWSLTGL 242 Query: 231 RHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKL 290 R EL L W VD + + V L + KT++ R V L + A+E L+ Q K Sbjct: 243 RSSELYGLRWGSVDFNRAEIKVHEALVFGEHKASTKTDSS-RMVLLTKRAIELLRLQKKF 301 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKRAGI 349 T FVF + P++S S+ + W ++ GI Sbjct: 302 TFMGGNDA-----------------FVFTNPYDD---LPWHSEKSIRNKYWIPTLRALGI 341 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND 400 R R PY+ RHT A L AG + A QMGH + +M Y W++ D Sbjct: 342 RYRRPYNMRHTNATMRLMAGQKIGYAAGQMGH-SIEMFTRTYARWLNGEQD 391 >UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFY4_THET1 Length = 363 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 78/345 (22%), Positives = 154/345 (44%), Gaps = 30/345 (8%) Query: 57 GEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRII 116 E + RR ++ ++ R T E W +I + ++ T+ ++ ++ + Sbjct: 35 AEVQRKRRELLAAADQGIMPARTRVTVAEFLSHWLEIIKPQVRPATLADYQNSVRNHIVP 94 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 + ++ + + + ++LL KG + +TV N + ++ A Sbjct: 95 ALGTIKLTKLEPAHLQELYSQLL-------------AKGLSAKTVRNIHGTIHKAIKDAA 141 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGEL 235 + G + + + + +R + L+ + LM++ G + + L A+ +G R GEL Sbjct: 142 RWGMLPRNVADIARPPKVSRQELQCLTPEQVRLLMQACAGTRYEPLLGLAIATGARQGEL 201 Query: 236 AALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 L W D+DL++G+V + R LT F PKT++G R+V + +E L+ HR Sbjct: 202 LGLRWADIDLQRGVVQITRQLTRQGTFSEPKTSSGKRSVHVPVSTVELLRR-------HR 254 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 ++ R + Q L F N P + + + A W+ +++AG+ R P+ Sbjct: 255 SLQLQERLSAGDRWQDQGLVF------ANTLGGPMDARNLIRA-WHRILQQAGL-PRMPF 306 Query: 356 HT-RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN 399 H+ RHT A LL G +P I ++GH + ++Y ++DM+ Sbjct: 307 HSLRHTSASLLLRQGVSPRLIQQRLGHADIAVTLQVYAHLVEDMD 351 >UniRef50_Q30RZ4 Phage integrase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30RZ4_SULDN Length = 392 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 50/288 (17%) Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 T IS I+ DI +++N LL T P S +K R++ ++L+ A+ + Sbjct: 122 TKISAIKPMDIQDWQNRLLTTLT-----PSSAQKYRSI---------FYNILQDAFINEI 167 Query: 181 ISTKPFEGVKK-LQRNRIKP--------DPLSKTEFNALMESEK--GQSQNLWKFAVYSG 229 I P + VK Q+++ K P + E ++E + ++N +K +++G Sbjct: 168 IVKNPMQLVKAPKQKSKQKTLFDEEEDVMPFNNAEIKLILEDTQLFEHNKNFYKLMLFTG 227 Query: 230 LRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 +R GE AL W+D+ +K + + + + G PKT + +R V +L LE L Q K Sbjct: 228 MRPGEAVALRWQDILFDKKQIKIMQT-RVAGKDGTPKTMSSMRYVDILPQTLEVLLSQQK 286 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 LTG E FY R +GK+ Y+S +L A + + R I Sbjct: 287 LTGD---KEYLFYTR-------------------SGKR--YFSHDTLAASFKRLLTRNKI 322 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 + R Y+ RHTFA +++ G + +++ +GH+ + Y +I + Sbjct: 323 KERVLYNLRHTFASQMISQGVDIVWVSKTLGHKDVSITLSTYTKFIQE 370 >UniRef50_Q2T3Q9 Bacteriophage integrase family protein n=5 Tax=Proteobacteria RepID=Q2T3Q9_BURTA Length = 190 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 87/177 (49%), Gaps = 25/177 (14%) Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT-ILDMFGPPKTNAGIRTVTLLQP 279 +++FA ++GLR EL AL W DVD ++G++ V+R LT KT + R V LL P Sbjct: 1 MFRFAFWTGLRTSELVALNWTDVDWKRGVIVVKRALTQTAKEAEDTKTRSSRREVKLLPP 60 Query: 280 ALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM-PRVCNGKQKPYYSVSSLGA 338 A+ AL Q K+ RE VF PR N + + S + Sbjct: 61 AMSALVAQ--------KAHTYLQGRE-----------VFQDPR--NAAR--WAGDSPIRI 97 Query: 339 RWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 W +K+A +R R PY TRHT+A +L+AG +P ++A QM H IY W+ Sbjct: 98 VWTRGLKQAQVRYRKPYQTRHTYASMMLSAGEHPMWVARQMDHSNQNTTVRIYARWM 154 >UniRef50_B8F9V7 Integrase family protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9V7_DESAA Length = 417 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 32/290 (11%) Query: 113 LRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLL 172 LRI I S P+ R D + R E+ T +L+N N R+ TV+ +++ S+L Sbjct: 116 LRIHILPS-PVFKNRAMDKIQ-RQEI----TTFLENMGEN---RSPATVEAAHSVIHSIL 166 Query: 173 RFAYQSGFISTKPFEGVKKL------QRNRIKPDPLSKTEFNALMESEKGQSQN----LW 222 A +G I + P + K +R++ +P P E + +E+ + + Sbjct: 167 DKAMHNGHIDSNPAHRLLKYILPAKNERDQKEPAPFKIKERDRFLETAEKMCNRSEVMIL 226 Query: 223 KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALE 282 K V++GLR GE A+ E +DLE+G ++ D F PKT R V L +E Sbjct: 227 KMMVHAGLRLGETLAMKEEGLDLERGSYHITETFK-RDSFSKPKTKKSRRKVDLPDFLVE 285 Query: 283 ALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNA 342 LK I R + + +F P + PY S + Sbjct: 286 DLKRHV----------IMLRRESLERGKGGDISLLF-PDPATLLECPY-SQKKIQGLMKK 333 Query: 343 AVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 ++A +R RNP+ RHT+A +L A +PA++ QMGH + Q+ +IYG Sbjct: 334 VCRKAKLRMRNPHDLRHTYATIMLEAHQSPAYVQRQMGHSSIQITVDIYG 383 >UniRef50_C3EB65 DNA integration/recombination/invertion protein n=1 Tax=Bacillus thuringiensis serovar pakistani str. T13001 RepID=C3EB65_BACTU Length = 367 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 18/252 (7%) Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFN---AL 210 KG T+++ + L + A + GFI P +GV KL+ R + P + E AL Sbjct: 112 KGLATTTINSIHTRVKMLFKKACEWGFIKKNPMDGVSKLKNKRQELQPYDQKEIVKILAL 171 Query: 211 MESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKT 267 E EK ++ L++ A+ +G+R GEL L W +D + +V++++ + + PKT Sbjct: 172 TEQEKDMNKMLFQLAIVTGMRRGELLGLEWGHIDFQNDMVHIQQTIVRAGKEILLKEPKT 231 Query: 268 NAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQ 327 + R +++ LK+ K R + + E +F+ NG+ Sbjct: 232 SKSKRIISIPPTFTTKLKQYKKYCAEKRIACGDLWEGE---------EHLFLFSTWNGRP 282 Query: 328 KPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMV 387 + RW ++ G+R + R T A +LLT G N I+ ++GH Q Sbjct: 283 ---LTPEKASTRWQYFTQKHGLRHIKLHGLRSTHATYLLTQGENLKVISERLGHSDIQTT 339 Query: 388 YEIYGMWIDDMN 399 IY ++++N Sbjct: 340 MNIYAHVLEEVN 351 >UniRef50_D1B4J0 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B4J0_SULD5 Length = 359 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 27/237 (11%) Query: 163 NYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLW 222 NY+ L + + AY I+ V + +++ DP S+ E + L+ + +N Sbjct: 121 NYLVALKGIFQVAYDDEVIAKNIASEVSIGRYEQVEADPFSEEEVSRLLAYANDEFKNYL 180 Query: 223 KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP--PKTNAGIRTVTLLQPA 280 A +G+R GE+ L +D+D + ++++R ++ + P PKT IR + +L Sbjct: 181 GIAFNTGMRIGEILGLMLQDIDEDS--ISIKRAVS-RNSKEPTTPKTQKSIRKIPILDAC 237 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW 340 L++Q + R +++ F+FM V K Y+ +L +W Sbjct: 238 RPYLEDQIR------------------RAREKRTMFLFMSEVTG---KFYHDADALKKKW 276 Query: 341 NAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF-IASQMGHETAQMVYEIYGMWID 396 + +KR+ +R R Y+TRHTFA +L +G +A +GH ++MV Y +I+ Sbjct: 277 LSVLKRSKVRHRKLYNTRHTFATAMLRSGKVSVLTVAKMLGHTNSKMVLTTYSGFIE 333 >UniRef50_A3D3X0 Phage integrase family protein n=1 Tax=Shewanella baltica OS155 RepID=A3D3X0_SHEB5 Length = 424 Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 108/411 (26%), Positives = 163/411 (39%), Gaps = 64/411 (15%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETL----KGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 +E+ G +R F + + ++TL EI S I K R L E+ Y Sbjct: 27 NIEVHGNSLRAVFKRQNRTYKQTLYVGLTSLEIV-SVISKLDGWRKLSPAELELAFANYK 85 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 R T+ T +L + +TK L T+K K K + + I E Sbjct: 86 RN-----------NTKFPLTINDLIENYTKNHYPTLAPATVKSYKGHFKRISLAIGEKN- 133 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 I I +D+ +RNE L TL +TV+ I LL +LL+ A +G + Sbjct: 134 ILEINSNDVFKFRNEQL--STL------------AWKTVNETIRLLDTLLQNAVDNGDLV 179 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEK-GQSQN----------LWKFAVYSGLR 231 P L+R +IK T L E + Q+ + F +GLR Sbjct: 180 KSPIN----LRRMKIKQGHGDSTITEKLFTIEDLNKIQDSISINPMIALIILFNCCAGLR 235 Query: 232 HGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKT----NAGIRTVTLLQPALEALKEQ 287 EL L+WED+DLEK I+ +RR + G KT R V +L PAL L E Sbjct: 236 FSELMGLSWEDIDLEKRIITIRR----ARVDGKYKTLKVRGVESRQVDILNPALWMLNEM 291 Query: 288 ----YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAA 343 Y+L+ I +Y + +++ + FV + C Q Y + + Sbjct: 292 KKRFYELSPQQ---TIKTLGADYKQIKQENVRFVLL---CMDTQTSYQNEQKFRKDFYHF 345 Query: 344 VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMW 394 +K + + P H RHTF GAN +I+ Q+GH + + Y W Sbjct: 346 LKVINVSKTKPNHCRHTFTSLACNEGANQTYISKQLGHASVLTTEKHYLKW 396 >UniRef50_B2JUB3 Integrase family protein n=2 Tax=Burkholderiales RepID=B2JUB3_BURP8 Length = 273 Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 113/247 (45%), Gaps = 27/247 (10%) Query: 157 TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV----KKLQRNRIKPDPLSKTEFNALME 212 T + + N + L S L+ A + + P G + R+ DPL E A++ Sbjct: 11 TAKRLSNIQSCLRSALQDAVDDEVLESNPLAGFTFTRNEPPRDADHADPLDAQEQAAVIA 70 Query: 213 SEK-GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT--ILDMFGPPKTNA 269 + + Q NLW+F +++ LR E+ AL W DVD + V VR+ +T + KT + Sbjct: 71 AARVPQIANLWQFLMWTVLRTSEVIALKWSDVDWLRETVQVRKAITRAAKGVAEDTKTLS 130 Query: 270 GIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK- 328 G R V LL PA+ AL Q E TF E +F G++ Sbjct: 131 GRRDVKLLAPAMAALMAQ---------KEYTFVAGEE----------IFNRPSWRGREGG 171 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 P+ + W +K A +R RNPY TRHT+A +L+AG ++A+QMGH + Sbjct: 172 PWRHDHQIWDAWKTTLKDAKVRYRNPYQTRHTYASMMLSAGERKIWVANQMGHSDTTSIK 231 Query: 389 EIYGMWI 395 YG WI Sbjct: 232 RNYGRWI 238 >UniRef50_A7H224 Phage integrase n=4 Tax=Campylobacter RepID=A7H224_CAMJD Length = 293 Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 30/241 (12%) Query: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS---QN 220 Y+ +L + + A +S P E +K + + K +P S E N ++E + Q Sbjct: 68 YLNILNQIFKLALDDDLLSKNPCENIKIIYF-KPKINPFSSFEVNQILEKSLNYNYKLQI 126 Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPA 280 K Y+G+R GE+ AL +++DLEK I+ + + G PKT IR + P Sbjct: 127 FLKIGFYTGMRTGEILALKIKEIDLEKRIIYINSTRSRFGE-GTPKTFYSIRKI----PI 181 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW 340 L K K+ + +Y KPY + Sbjct: 182 FNILYTDLKNFVLSNKNNTYLFETQYN--------------------KPYRDDFVFCKFY 221 Query: 341 NAAVKRAGIRRRNPYHTRHTFAC-WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN 399 +K + R PY RHTFA +LL + +P ++ +GH + +MVY++Y +IDD+ Sbjct: 222 KQILKDLSLSYRRPYTMRHTFATNFLLNSNLSPLELSKILGHSSPEMVYKVYVKYIDDLK 281 Query: 400 D 400 D Sbjct: 282 D 282 >UniRef50_B0UFZ7 Integrase family protein n=3 Tax=Methylobacterium RepID=B0UFZ7_METS4 Length = 380 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 78/328 (23%), Positives = 138/328 (42%), Gaps = 22/328 (6%) Query: 82 TFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 T G+ D W K +E L +T+ + + + S ++ + + ++ EL Sbjct: 62 TVGQAADAWLKHAEEGGLEWSTVLHYQQHVNEHIRPLIGSLRLTQVTTPRVYSFAEEL-- 119 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK--KLQRNRIK 198 KGR+ V + L + RFA G P VK + +R++ + Sbjct: 120 -----------RAKGRSPEMVRRAVQSLGRIFRFAKGRGLAGQNPVADVKLKRSKRDQAR 168 Query: 199 PDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 + ++ E A++ + +G+ + L A+++ LR EL L W DVDL++ ++ VR+ Sbjct: 169 VEIPTREELRAILGAAQGRWRPLIVTAMFTALRASELRGLRWSDVDLKRRVLTVRQRADA 228 Query: 259 LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVF 318 GPPK+ AG R V L + L+E ++L + ++ F G+ E H Sbjct: 229 WKRIGPPKSEAGTRDVPLAPMVVNTLRE-WRLACPKGELDLVFPS-GAGQVEH---HPNI 283 Query: 319 MPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT-RHTFACWLLTAGANPAFIAS 377 + R Q V + + A + R +H RH A + +G P + + Sbjct: 284 IARGWEPTQIAAGVVEMVDGKDKAGNPAKAAKGRYNFHALRHAAASMFIESGMTPKRVQA 343 Query: 378 QMGHETAQMVYEIYGMWIDDMNDEQIAM 405 MGH + + Y+ YG D +Q AM Sbjct: 344 IMGHSSIIVTYDTYGHLFSDDEADQNAM 371 >UniRef50_C6UV22 Site-specific recombinase, phage integrase family n=11 Tax=Escherichia coli O157:H7 RepID=C6UV22_ECO5T Length = 162 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 1/149 (0%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T EL + + +KETE+ ++ ++ +K + II E S I +L R ELL G Sbjct: 12 TIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTG 71 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 + N + GR+ TV+NY+ L ++ +F +G+++ PF+G+ L+ +R PDP Sbjct: 72 YQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDP 131 Query: 202 LSKTEFNALMESEKG-QSQNLWKFAVYSG 229 LS+ EF L+++ + Q++NLW V SG Sbjct: 132 LSREEFIRLIDACRNQQAKNLWCNTVLSG 160 >UniRef50_A7GY77 ATP synthase C chain (Lipid-binding protein)(Dicyclohexylcarbodiimide-binding protein) n=1 Tax=Campylobacter curvus 525.92 RepID=A7GY77_CAMC5 Length = 276 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 32/213 (15%) Query: 151 SNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNAL 210 SNK+ +R+V +L+ A I PF+ V KL+ +++ PLS +E + Sbjct: 91 SNKRIYNIRSV------FSMILKDAVMDELIKRNPFDSVPKLRNEKVEIKPLSLSEVQRV 144 Query: 211 MESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAG 270 + N+ K A ++G+R GE+ AL W+ +D EK + + + + M PPKT Sbjct: 145 ISVADPHFANVLKLAFFTGMRTGEMIALRWDKIDFEKETIRIDQAIRC-GMLNPPKTQTS 203 Query: 271 IRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPY 330 IR + +L+ EAL KQ ++ NG Sbjct: 204 IRIIKMLRHVKEALLNL-----------------------KQDNDSEWVLPTQNGTM--L 238 Query: 331 YSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 Y +L RW A+KRAG+ Y TRHTFA Sbjct: 239 YEPKTLNRRWKEALKRAGLEYSVFYQTRHTFAS 271 >UniRef50_B7WRL6 Bbp50 n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRL6_COMTE Length = 323 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 106/249 (42%), Gaps = 32/249 (12%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETL----KGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 GVEIR IR+ F RG+R R TL K T +NIK A L A I +I +G F Sbjct: 6 GVEIRESGIRLSFAHRGERIRRTLLVEGKAIAPTPANIKYAIRLLAEIKLKIRAGNFVMR 65 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 FP+ T A T D W +K E +T+ S +K + I E Sbjct: 66 EYFPEGGTVAAGTTV------AHQLDHWLSVKVAE--NSTLAGYLSAIKFWKPFIGEKQ- 116 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 +S +++SDIL R + G+TV +NY++ L S + A ++ Sbjct: 117 VSALKHSDILRAIKT------------RPDLSGKTV---NNYVSALRSAMDLAVLDKLLT 161 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ----SQNLWKFAVYSGLRHGELAAL 238 P V + R PDP + E +++ + NL F +SGLR E+ AL Sbjct: 162 ENPVAAVPSAKWQREPPDPFDREEVEQIIDYARANFAPTVANLIAFRFFSGLRTSEMVAL 221 Query: 239 AWEDVDLEK 247 W +D K Sbjct: 222 RWHSIDWNK 230 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 1/58 (1%) Query: 340 WNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 W +K GIR R P H RHT+A LL AGA PA+ A QMGH +A+M +Y W+DD Sbjct: 238 WVPMLKALGIRYRPPNHMRHTYATMLLMAGATPAYAAKQMGH-SAEMFLSVYSKWLDD 294 >UniRef50_C0QBZ6 Predicted bacteriophage P4 integrase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBZ6_DESAH Length = 386 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 138/312 (44%), Gaps = 37/312 (11%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 FGE+ W ++K+T+++ +T+++ + + + I+ + + R I E+L Sbjct: 77 FGEIAVQWAELKKTKVSKSTIQEYRKVMN--KYILPQ---FGNRRIDSITGLEIEVL--- 128 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 +K +T +N + ++RFA + I PF+ V ++R + PL Sbjct: 129 --------VSKLKCGGKTKNNILTPFKDVMRFAKKHKLIQHNPFDDVDSIKRESSEIHPL 180 Query: 203 SKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMF 262 S E +E + L+ F ++G R GE AAL W+ VDL G++++ + + + Sbjct: 181 SLGEIKLFLEHVPDYYRPLFTFLFFTGARFGEAAALKWKRVDLTNGMIHIAKTY-VRGEY 239 Query: 263 GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR---TEKQKLHFVFM 319 PKT IRTV L ++AL +Q + T KSE F + GR LH VF Sbjct: 240 KDPKTKGSIRTVKLSPIVIDALHQQREHT--MDKSEFVFLN-TLGRHIHPHSVNLH-VFR 295 Query: 320 PRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 P ++ G N + A RR+ TR ++ L F+ Q+ Sbjct: 296 P-----------TLEKAGLSANKSFSAA--TRRSCKDTRSSYITNSLDNNERMGFVQKQV 342 Query: 380 GHETAQMVYEIY 391 GH T +M+ E Y Sbjct: 343 GHTTTKMIVEHY 354 >UniRef50_Q4FUG6 Possible phage integrase n=1 Tax=Psychrobacter arcticus 273-4 RepID=Q4FUG6_PSYA2 Length = 357 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 41/262 (15%) Query: 159 RTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM---ESEK 215 +T +N + L + A I T P + +K + PDP S+ E L+ + Sbjct: 120 KTRNNNLIPLRGVFGIALDDSVIHTNPVDKIKNTKHQSPPPDPFSRDEMERLLTWLHDKH 179 Query: 216 GQSQNLW----KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGI 271 G+ + ++ + A ++G+R GEL AL W+D+D + G++ V + ++ ++ KT A Sbjct: 180 GKDEAVYWLYFELAFWTGMRTGELLALTWDDIDWDAGLIKVSKVMSDGELVNRTKT-AEY 238 Query: 272 RTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM-PRVCNG----K 326 R V + +ALK ++ KS ++ +FM PR N Sbjct: 239 RDVFFNARSEDALKRLKRI-----KSAVS--------------DRLFMSPRFINSAWQTD 279 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQM 386 + P +++ A+K GIR R Y TRHTF LT G N F+A Q GH + + Sbjct: 280 KTPRRALTE-------AMKATGIRHRATYTTRHTFITNCLTDGLNIYFVAKQTGH-SVRT 331 Query: 387 VYEIYGMWID-DMNDEQIAMLN 407 + Y WID +IA LN Sbjct: 332 LETRYARWIDVSKARSEIAKLN 353 >UniRef50_UPI000169495E prophage LambdaBa04, site-specific recombinase, phage integrase family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169495E Length = 379 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 37/262 (14%) Query: 161 VDNYIALLCSLLRFAYQSGFISTKPFEGVKK--LQRNRIKPDPLSKTEFNALMESEKGQS 218 V N LL A + IS P VKK L R K + + ++ K Sbjct: 142 VQNIGNLLSKAFTQAVKWNMISRNPIPLVKKPSLSRKNTKMKTWTVEDQRKFLDYAKDGP 201 Query: 219 Q---NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN-------LTILDMFGPPKTN 268 + ++ A+ SG+R GEL L W+DVD +KGIV+++R L + DM PKT Sbjct: 202 KLYYVIFLLALTSGMRKGELLGLIWDDVDTKKGIVSIKRTIVYAQRKLYLKDM---PKTE 258 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 + IRT+ L +P ++ +K Q+KL +L+ +F G Sbjct: 259 SAIRTIQLPEPTIKVMK-QWKL-----------------ECPANELNLLFPSPKTKGILY 300 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 P +SL + +K AG+ + RHTFA LL + NP + +GH T + Sbjct: 301 P----NSLDKQLAKTIKGAGVPEITMHGLRHTFATTLLGSNVNPKIVQEMLGHATIKTTM 356 Query: 389 EIYGMWIDDMNDEQIAMLNARL 410 + Y + +M + + L A L Sbjct: 357 DTYSHVLPNMQKDAASQLGAVL 378 >UniRef50_O55248 Integrase n=4 Tax=root RepID=O55248_9VIRU Length = 372 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 106/248 (42%), Gaps = 40/248 (16%) Query: 152 NKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP----LSKTEF 207 + G +T+ N L L A ++ST P G ++L R + D L+ EF Sbjct: 135 DGNGHAPKTLRNKYGFLSGALNAAVPR-YLSTNPASG-RRLPRGNAEDDDEIRMLTHAEF 192 Query: 208 NALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGP 264 + L ++ + + +F V +GLR GE++AL VDLE + VR+ + GP Sbjct: 193 DRLRDAVTPHWKLMVQFMVSTGLRWGEVSALQPRHVDLETSTIRVRQAWKYSSAGYVLGP 252 Query: 265 PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCN 324 PKT RTV + LE L + FVF+ N Sbjct: 253 PKTKRSRRTVDVPARLLERLDLSNE--------------------------FVFV----N 282 Query: 325 GKQKPYYSVSSLGARWNAAVKRAG-IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHET 383 P L WN AV++AG + R P+ RHT+A W LT G ++ Q+GHE+ Sbjct: 283 TDGGPVRYPGFLRRVWNPAVEKAGLVPRPTPHDLRHTYASWQLTGGTPVTIVSRQLGHES 342 Query: 384 AQMVYEIY 391 Q+ + Y Sbjct: 343 IQITVDTY 350 >UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSP6_9BACI Length = 399 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/358 (23%), Positives = 153/358 (42%), Gaps = 32/358 (8%) Query: 60 EYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 E L +F + + +K + + TK EL+ T+ S +K + Sbjct: 53 EELLKFKMEVEAGEYIAPEKMKLADFIKEWETKYAVKELSETTLNNYLSHIKNHILPALG 112 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 I I+ I+N+ +++ + KK RT++N + ++L+ A + Sbjct: 113 HMRIDQIKPVHIVNFLDQIKRAD--------GKKKPLATRTIENAYLTIRNILQRAVEWQ 164 Query: 180 FISTKPFEGVKKLQRNRIKPDPL---SKTEFNALMESEKGQSQNLWK----FAVYSGLRH 232 I + P VKK + + + + E AL + + + + W+ A+ +GLR Sbjct: 165 IIKSNPASAVKKPKSKKEAVKEVQVYDEKEVEALFRAVQNEPFH-WRIFTTLAIAAGLRR 223 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTI---LDMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 GEL AL W ++DLEKG++ + + + + PKT R V+L + + LK + Sbjct: 224 GELLALEWSNIDLEKGVIRINKAIVKGRKRSVEKSPKTKKSNRLVSLPKSVVAELKLYRR 283 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 H K ++ + G K++ ++F CN + +Y + W KRAGI Sbjct: 284 ---HWLKQKL-----QAGDLWKEEKEYLF----CNIDGRHFYPTTP-TTWWRRFTKRAGI 330 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 R + RHT A L+ G + IA ++GH ++ +IYG + + E L+ Sbjct: 331 RYIRLHDLRHTSATLLINQGVHAKIIAERLGHSDIRVTMDIYGHALQKADHEAANKLD 388 >UniRef50_Q4HNR8 Site-specific recombinase, phage integrase family, putative n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HNR8_CAMUP Length = 379 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 36/251 (14%) Query: 152 NKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM 211 ++K +V T +Y L +L +A ++ I PF+ ++K + + + S E L+ Sbjct: 141 DEKNISVCTKKHYAKTLNRVLEYALENELIEKNPFK-MRKWRDDAKEIQTFSNQEIQTLL 199 Query: 212 ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGI 271 G+ K A+ G R GE+ AL W+ +D E + + +++ + G PKT Sbjct: 200 TQSTGEIGIYLKIALLCGARTGEILALQWKHIDFENQKIIIEQSINSFGL-GSPKTANSR 258 Query: 272 RTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPR----VCNGKQ 327 R + LL+P L LK G E++K PR + G Sbjct: 259 RIIDLLEPLLSFLK---------------------GVKEQRK------PREEDFIFKGVL 291 Query: 328 KPY---YSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETA 384 KPY + S L ++ A + R I R Y+TRH+FA ++L+ G N +++ MGH+ Sbjct: 292 KPYIKNFHKSYLRVQYIALLSRFNIAYRPIYNTRHSFASFMLSKGENLMWVSWMMGHKNT 351 Query: 385 QMVYEIYGMWI 395 + Y ++ Sbjct: 352 SITLSFYSKYL 362 >UniRef50_C8PFF6 Putative phage integrase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFF6_9PROT Length = 290 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 34/239 (14%) Query: 175 AYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGE 234 A ++G ++ PF K + R K DP S E + ++ G+ ++ FA Y+G R E Sbjct: 77 AVEAGKLAKNPFLRAKYPKIPRSKTDPFSVEEVDLMLSKASGRLESFLAFAFYTGARCCE 136 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAG-IRTVTLLQPALEALKEQYKLTGH 293 + AL W+D+D E +++ ++LT D P+T G R V + P L + + K Sbjct: 137 ILALCWDDIDTEAMSISISKSLT--DGLVKPRTKTGEDRIVPIFAPLLPYIAQLEK---- 190 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 HR SE F + KQ F NG RW + GI R+ Sbjct: 191 HRDSEWVF-------SRKQDHLFGSTALFGNG-------------RWRKFLAECGIPYRS 230 Query: 354 PYHTRHTFACWLL---TAGANPAFIASQ-MGHETAQMVYEIYGMWIDDMN---DEQIAM 405 HTRHTFA ++ G P SQ +GH + M ++Y ++ + + D IA+ Sbjct: 231 ARHTRHTFATHMVERAVKGEIPLKWVSQILGHASLDMTIKVYARFLQNEHMKIDRSIAL 289 >UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWI5_9AQUI Length = 369 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 116/253 (45%), Gaps = 25/253 (9%) Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQ 219 TV + LL + + A G+I P + +++ +R + + D L+ E L+E+ + Sbjct: 123 TVLQEVVLLKEMFKHAQSWGYIKHNPAQNLQRPRREKKEIDILTPEEVEFLLENTHEHYR 182 Query: 220 NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQP 279 + AV +GLR GEL L W+D+D + VRR L + F PK+ I V + Sbjct: 183 VAFLTAVMTGLRAGELWGLKWDDIDWHSKQIYVRRTLWNGE-FHTPKSRHSIGKVDM--- 238 Query: 280 ALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR 339 + L E+ KL EI R K + VF + K +P + + Sbjct: 239 -PDVLVEELKLW------EI--------RCPPNKYNLVF----PSPKGEPSEHQNVVNRY 279 Query: 340 WNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM- 398 + A++RAG+R + + RHT A + AG N +I Q+GH + +IYG +DM Sbjct: 280 FKPALRRAGLRVVSFHSLRHTNASIRIRAGQNIKYIQRQLGHASINTTLDIYGHLFEDMD 339 Query: 399 -NDEQIAMLNARL 410 N Q +L+ L Sbjct: 340 FNRSQAQLLDGVL 352 >UniRef50_A6NY15 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NY15_9BACE Length = 417 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 24/257 (9%) Query: 167 LLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-SQNLWKFA 225 +L L A F P G+K ++ R++P LSK E ++ KG + L+ A Sbjct: 138 VLLDLFDKAIMDDFAFKNPARGIKVVRDERVEPRVLSKEEQVDFFDTCKGTFYEELFTVA 197 Query: 226 VYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG---------PPKTNAGIRTVTL 276 V +GLR GEL AL W DV+L++ ++V R L + G PPKT +R V Sbjct: 198 VLTGLRPGELFALRWSDVNLKEKYLDVTRTLLYQKLEGDTGKAFHIHPPKTATSLRRVYF 257 Query: 277 LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYS---- 332 + AL Q++ +KS I+ RE + +F+ + YS Sbjct: 258 DERCKLALMSQFR-----KKSNISL--RETSSPLEGLEDLLFVTKYNTPLNSSLYSSAIQ 310 Query: 333 -VSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 + L +AV + + + RHT+A A +P + Q+GH T +M ++Y Sbjct: 311 RIVDLINESRSAVDQFETFSGHCF--RHTYATRAFEADVDPKVVQKQLGHATLKMTMDLY 368 Query: 392 GMWIDDMNDEQIAMLNA 408 +D E++ L+A Sbjct: 369 THLFEDKKLEELTKLDA 385 >UniRef50_B2UXR9 Phage integrase n=3 Tax=Clostridium RepID=B2UXR9_CLOBA Length = 389 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 36/313 (11%) Query: 116 IICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFA 175 I E+ +HI+ S+I + + + L + + + KKG++ V L+ +++A Sbjct: 84 IKYETVYRNHIKNSEISDIKIKELTSKDIQIYYNNLIKKGKSTTLVKTIHKLIAPCIKYA 143 Query: 176 YQSGFISTKPFEGV----KKLQRNRIKPD----PLSKTEFNALMESEKGQS-QNLWKFAV 226 Y + FI K F G K+ +++++ + P + E +++ KG + L+ A+ Sbjct: 144 YNNDFI-IKDFTGSLIIPKETEKDKLNKESSVIPFTLEEQKEFIKAIKGNKFEALFITAL 202 Query: 227 YSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP------------PKTNAGIRTV 274 SGLR GEL AL W D++L++ +NV +NL ++ PKT G R V Sbjct: 203 NSGLREGELLALTWNDINLKEKYINVNKNLGVVTEVSKDGRGVSKLEVQTPKTRKGKRQV 262 Query: 275 TLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVS 334 ++ + LKE K +R Y + +F N Y + Sbjct: 263 SIPNFLITVLKEYKKQQSKNRLKLANKYTNN---------NLIFCDEYGN-----YLNRD 308 Query: 335 SLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMW 394 + ++ +K + I+ R + RHT+A L G + +GH + Y Sbjct: 309 KVTYQYKKLLKESKIKTRKFHDLRHTYATRLFELGEQARTVQELLGHSDVSVTLNTYTHV 368 Query: 395 IDDMNDEQIAMLN 407 +DDM ++ ++ L+ Sbjct: 369 LDDMKEKAVSKLD 381 >UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WV14_HALHL Length = 384 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 93/380 (24%), Positives = 154/380 (40%), Gaps = 40/380 (10%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMV------- 75 G+R RET G T N ++ I EI G F+Y FP S A+ Sbjct: 20 GRRFRET-SGLRDTPENRRRIRRDLRRINAEIEMGTFDYAAWFPNSRKLAEAQRWLREQG 78 Query: 76 TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 + + FG W ++ + + ++ L+ I P+ I + +R Sbjct: 79 SRAPDQRFGPYAWQWYQLHLGDWKESYARRVCGVLEGYLIPHFGEWPLDQITERAVRAFR 138 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 +ELL L N R ++ R ++ + L ++RFA +S P ++ L+ + Sbjct: 139 HELLE-----LTNARGERRLSNAR-INFILTPLAGVMRFA-ESELGIEHPMRQIRPLRDD 191 Query: 196 RIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 R P PL+ + +A + + +K Y+GLR E+ L VDLE+ + VR Sbjct: 192 RDDPMPLTAEQVHAFLAAVDPDYYLYFKLRFYTGLRSCEVDGLKVCYVDLERRQLRVRE- 250 Query: 256 LTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLH 315 +D + R L P L A +L H R + Y + R++ + LH Sbjct: 251 -ARVDGRQTTLKHRKTRRDIPLSPGLAA-----ELDRHIRGRQGDDY--VFTRSDGRPLH 302 Query: 316 FVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFI 375 P + + W +K G+ R Y TRHT A L AG NP F+ Sbjct: 303 -------------PSWVAEQV---WKPTLKALGLAPRRVYQTRHTAAVLHLAAGENPLFV 346 Query: 376 ASQMGHETAQMVYEIYGMWI 395 + +GH + +M++E Y ++ Sbjct: 347 SRLLGHSSTKMLFERYAPFV 366 >UniRef50_B6FRP3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B6FRP3_9CLOT Length = 387 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 24/208 (11%) Query: 202 LSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 L+ E +E KG +NL+ A+ +GLR GEL+AL WED+D +K +++V+ L Sbjct: 178 LTIRETELFLEQAKGTFYENLFILALETGLRVGELSALQWEDIDFKKKVIHVKHTLCYFS 237 Query: 261 MFG-------PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK 313 G KTN G RT+ L A+ +LK Q KL +K EI G+T K++ Sbjct: 238 KNGKYVFEMHDTKTNNGKRTIPLTAKAINSLKCQ-KL----QKQEIIL----KGKTAKEE 288 Query: 314 L-HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY--HT-RHTFACWLLTAG 369 + VF+ + N + + ++ + +AGI +P+ HT RHTFA + G Sbjct: 289 FQNLVFVTK--NNQPTQQFLINQCMQLVIQNMNKAGI-DFSPFTLHTLRHTFATRAIECG 345 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDD 397 NP + +GH T QM ++Y +D Sbjct: 346 MNPKTLQKLLGHGTLQMTMDLYCHVTED 373 >UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973B6A Length = 408 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 28/257 (10%) Query: 152 NKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM 211 +K+G +T + +L + A + P +G++ + N+ S E Sbjct: 125 DKQGLQFQTQNKVRVMLLDMYNKAILDNYAVRNPAKGIRLPKHNKRNKRVFSVEEQIDFF 184 Query: 212 ESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG------- 263 + KG NL+ AV +GLR GEL AL W+D+DLEK +NV + L + G Sbjct: 185 DCCKGTFYDNLFTVAVNTGLRQGELCALTWDDIDLEKKEINVEKTLLYQKLEGDTGKTFH 244 Query: 264 --PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPR 321 PPKT R V + + ALK+Q R + I+ R+ + EK + +F + Sbjct: 245 INPPKTKTSNRKVPINKQCEIALKKQL----IQRNNIIS---RQSAKPEKGFENLLFTTK 297 Query: 322 ----VCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN---PYHTRHTFACWLLTAGANPAF 374 +C+ Q ++ + N+ R+ I + P+ RHTFA AG +P Sbjct: 298 YATPICD--QILIDAIKKIVNEINSV--RSEIEQFEMFTPHCFRHTFATRCFEAGISPKV 353 Query: 375 IASQMGHETAQMVYEIY 391 I + +GH T QM ++Y Sbjct: 354 IQTYLGHSTLQMTMDLY 370 >UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABG2_CARHZ Length = 371 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 73/270 (27%), Positives = 118/270 (43%), Gaps = 34/270 (12%) Query: 145 YLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLS- 203 Y ++ R G+T+ + +L FA + I P + V + + K L Sbjct: 116 YYNSKRDELSGKTLL---QHHRILHKAFDFAMKLQLIPNNPIDFVDSPKAKKYKAKILDL 172 Query: 204 ---KTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 KT NAL +++ NL A+ GLR GEL AL WEDV+ E+G + +RRNL Sbjct: 173 KEIKTLLNALKDTDLEVPINL---ALSLGLRRGELLALKWEDVNWEEGTIQIRRNLVRAG 229 Query: 261 ---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF---YHREYGRTEKQKL 314 + PK+ IRT+ L + L LK +HRK +I EY T Sbjct: 230 TKLILKEPKSETSIRTLKLSKTLLTMLK-------NHRKKQIELKLMLGNEYKDT----- 277 Query: 315 HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF 374 +C + S+ +++ +K+ G+ + RHT A +L + Sbjct: 278 -----GFICCKNNGEMINPSTFSHQFSDFLKKHGLPDIRLHDLRHTNATLMLKSNIPAKI 332 Query: 375 IASQMGHETAQMVYEIYGMWIDDMNDEQIA 404 +S++GH T + ++Y + DM DE++A Sbjct: 333 ASSRLGHSTVAITLDLYSHVLTDM-DEEVA 361 >UniRef50_A4ILC8 DNA integration/recombination/invertion protein n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ILC8_GEOTN Length = 387 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 94/365 (25%), Positives = 161/365 (44%), Gaps = 52/365 (14%) Query: 41 KKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIW-TKIKETELT 99 K+A A + EI +GE+ AKM + + +W E +L+ Sbjct: 40 KEAEKELAKFIAEIEAGEY---------IKPAKM-------SLSDFIQLWRDNYAEKQLS 83 Query: 100 TNTMKKTKSQLKTLRIIICESTPISHIRYSDI-----LNYRNELLHGETLYLDNPRSNKK 154 T + + + T RII + H++ +DI + + N L ET LD KK Sbjct: 84 PKTFETYNNYINT-RII----PQLGHLQLADIKPIHLIRFLNNLKKDETR-LDG----KK 133 Query: 155 GR-TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM-- 211 G + T++ Y +L ++ A + F+ P E + K + + K D + E L+ Sbjct: 134 GSLSEATINYYRRILKNIFNRAVEWKFLQVNPAEKLPKEKEDIGKGDVYDENETRLLLKC 193 Query: 212 -ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG----PPK 266 E E + + + A+ GLR GEL AL WED+DLE G + V+ +L+ G PK Sbjct: 194 LEKEDLKWRLYFTLALTCGLRKGELLALQWEDIDLESGTLYVKHSLSYTKEKGFFLKEPK 253 Query: 267 TNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGK 326 + R + + L LK +YK + +E + E + ++ F+ NG Sbjct: 254 SKKSKREIAIPSFVLPLLK-KYK--------NVRLREKEKLQDEWEGGNYNFVFATWNG- 303 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQM 386 KP++ S +W +KR +R P+ RHT A +L G N ++ ++GH + ++ Sbjct: 304 -KPHHH-SYPRTKWERFLKRNNLRYIRPHDLRHTSATIMLNNGVNYKTVSERLGHSSTRI 361 Query: 387 VYEIY 391 ++ Y Sbjct: 362 TFDFY 366 >UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VEW1_9CLOT Length = 379 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 28/280 (10%) Query: 139 LHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK--LQRNR 196 +H + ++ D K T+ IAL ++L FA ++ I T P + K + + Sbjct: 114 IHCQKIFSDMADEGYKTTTI--YQTRIALY-NMLEFAKENEVIITNPCKKSVKSDIGKPS 170 Query: 197 IKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 K + L+ + + + KGQS + ++FA+ +GLR GEL L WED++ E+ + + R+ Sbjct: 171 DKKEALTIDDQRRFLAAAKGQSYEYQYRFALQTGLRTGELVGLKWEDINFERKTLTIERS 230 Query: 256 LTILDM-----FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 + GPPK+ +G RT+ L A+ LK Q + +I +E+ T Sbjct: 231 MEFRYKVGEWRVGPPKSKSGYRTIPLTDEAICILKAQ-----KEKNRKIKVIDKEWADT- 284 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 VF+ R K +P + + A + K AGI+R + + RHTFA + G Sbjct: 285 ------VFLCR----KGQPVKNSTYDTALFKICDK-AGIKRFSMHVLRHTFATRCIEGGM 333 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 P + +GH + +Y ++ ++I ++ L Sbjct: 334 MPKTLQKILGHSNIGITMNLYVHITEEEKQKEIDLVAEAL 373 >UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH90_9BACT Length = 399 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 98/407 (24%), Positives = 161/407 (39%), Gaps = 69/407 (16%) Query: 11 RGRYIR--IWFMFRG-KRCRETLKGWEITNSNIK-----KAGNLRALIVHEINSGEFEYL 62 RG+ R I FMF+G +R ++L E K A L + I +I F+Y Sbjct: 7 RGKKARLEIIFMFQGIRRYEQSLYYCETGKDTCKCQDCRSASALLSEIERKIAEKTFKYE 66 Query: 63 RRFPQS-----STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTL---- 113 FP S + + + T+ EL W E+ + +T K + + L Sbjct: 67 TYFPDSKYVRENQQLHLNSDMFFDTYAEL---WLSSIESSVAYSTYKTYSTAVSKLSSYF 123 Query: 114 -RIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLL 172 R + E P SHI+ Y+ N + K T+ NY+ + S+ Sbjct: 124 SRFKLSEIKP-SHIQQ----------------YISNSELSAK-----TIANYLGVFHSIF 161 Query: 173 RFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL---WKFAVYSG 229 A + +S P + VKK + K DP S E + +++ + ++ + Y+G Sbjct: 162 ESAVRDDLLSKNPCKHVKKPRVQTEKVDPFSIEEVSMILDWMRQHHPHMTIIFALGFYTG 221 Query: 230 LRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 +R GE AL W D+D + + V+R +T + KT A R + ++ E L Sbjct: 222 MRVGEAIALKWSDIDFKHHKIIVQRTITKNRIKESTKT-ADYRVIDIIPMLDEYL----- 275 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 H + + TF E+ F + KP +K G+ Sbjct: 276 ----HFQKQYTFMKSEWVTVTSYGEPFTKTQNITEDYFKP-------------CLKALGL 318 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID 396 R R RH+FAC +L A +I + +GH + QM++ YG I+ Sbjct: 319 RYRILNQMRHSFACMMLDAREEINWIKNMLGHSSLQMLFRKYGNRIN 365 >UniRef50_UPI0001873836 hypothetical protein PSPTOT1_3787 n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI0001873836 Length = 184 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 6/150 (4%) Query: 264 PPKTNAGI-RTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRV 322 P N+ I R V L++PAL+AL++ LT R + R+ + KLHFVF+ Sbjct: 36 PSDKNSPITRKVRLIKPALDALQKLRALTQKTRPHHVDIVERDNRTVRQHKLHFVFL-NA 94 Query: 323 CNGKQKPYYSVSSLGAR-WNAAVKRAGIRRRNPYHTRHTFACWLLTAG-ANPAFIASQMG 380 +G +P+ S ++ R + ++ AG+R R P RHT+A +L++G A+ + A QMG Sbjct: 95 SSG--EPHVSDFTIRDRFFKTHLEHAGVRYRGPGQCRHTYASQMLSSGVASIDWSAEQMG 152 Query: 381 HETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 H M+++ YG WI++ + I ML L Sbjct: 153 HTDGNMIHKHYGTWINEDGPDVIGMLEHAL 182 >UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces griseus subsp. griseus NBRC 13350 RepID=B1VP49_STRGG Length = 423 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 23/252 (9%) Query: 150 RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNA 209 R K+ + RTV A+L S L+ A + I+ V+ + PL E Sbjct: 153 RCCKRRPSARTVQYIHAVLRSALQQAIREELIARNVARIVETPTVEPKEVRPLDAAEVRL 212 Query: 210 LMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPP 265 L+++ + LW V +GLR GE L W DVDL G + VRRN+ + +FG P Sbjct: 213 LLKTARPHRLYALWLLLVSTGLRRGEALGLTWADVDLTAGTLRVRRNVQRIRRELIFGTP 272 Query: 266 KTNAGIRTVTLLQPALEALKEQYKLTGH--HRKSEITFYHREYGRTEKQKLHFVFMP--- 320 KT +RT++L + ++A LT H ++ E ++ +T Q VF Sbjct: 273 KTMRSVRTISLPKSCVQA------LTAHRTQQEREQKVAGAKWQQTPGQPAGLVFTTLTG 326 Query: 321 RVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMG 380 RV + + SL + A +RR + RHT A LL G + I +G Sbjct: 327 RVTDPR--------SLNRMLTILCRDAKVRRVRVHDLRHTCASLLLAQGVDARTIMETLG 378 Query: 381 HETAQMVYEIYG 392 H T M + Y Sbjct: 379 HSTITMTLDTYA 390 >UniRef50_D1B1M5 Integrase family protein n=2 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B1M5_SULD5 Length = 346 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/231 (29%), Positives = 99/231 (42%), Gaps = 31/231 (13%) Query: 159 RTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS 218 +TV Y + L + +FA+ I P VK + R D S + L+E GQ Sbjct: 126 KTVKEYRSTLSVVFKFAFNDDLIRKNPLTPVKSPKLPRRIVDVFSDEDRKLLIEHSSGQL 185 Query: 219 QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV--RRNLTILDMFGPPKTNAGIRTVTL 276 NL +F YSGLR GE+ L W+++D +K ++V R +D+ PK + IR + L Sbjct: 186 HNLIQFVFYSGLRAGEIIGLKWDNIDFDKNKIDVCMRVRKGTVDL---PKGDK-IRLIDL 241 Query: 277 LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL 336 L A +AL Q +LTG S F+ +E KPY+S +S+ Sbjct: 242 LPQAKQALLVQRQLTG---LSSFVFHSKE---------------------GKPYFSETSI 277 Query: 337 GARWNAAVKRAGIRRRNPYH-TRHTFACWLLTAGANPAFIASQMGHETAQM 386 K+ I R T L G +I QMGHET ++ Sbjct: 278 TQSIQELCKKLHIVGGGGLQKMRRTHNTMLKQFGLPLDWILHQMGHETDEV 328 >UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36A2 RepID=C7XQF9_9FUSO Length = 351 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 32/211 (15%) Query: 202 LSKTEFNALMESEKGQSQNLWKFAVY-SGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 LS EFN +++ + + ++ +G+R GEL AL +EDVD E + + +N I+ Sbjct: 169 LSLQEFNKMIDCVTDKENKFFYIILFWTGMRKGELLALTYEDVDFENKTITINKNFQIVK 228 Query: 261 ---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 + PKT G R + + L +K+ + + K++ F Sbjct: 229 KERLITDPKTPRGRRVIAVNDVVLNCIKDLWNTSYKPNKTDKIF---------------- 272 Query: 318 FMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 Y S SL + + A K+AG+ R + RH+ A +LL+ G N ++ Sbjct: 273 ------------YLSKDSLKRQLDTACKKAGVPRIRVHDLRHSHASYLLSNGVNIVILSR 320 Query: 378 QMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 ++GHE Q IY D +LN+ Sbjct: 321 RLGHEKVQTTLNIYCHICPSSEDRLNDVLNS 351 >UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus RepID=B4BIA4_9BACI Length = 384 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/265 (22%), Positives = 117/265 (44%), Gaps = 22/265 (8%) Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 ++ Y+D + G +R + N LL A + + P + K + + Sbjct: 118 DSFYVDKLDTGYSGAYIRQMHN---LLNQAFDQAVKWSLVKVNPVKNAKPPKVKSEEKIT 174 Query: 202 LSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 + E N + K S + + A+++G+R GE+ L W+DVD E + ++R+L + Sbjct: 175 WTVDEVNRFLNLIKDSSMEIPYLLAIFTGMRRGEVLGLKWDDVDFENKKIRIKRSLCFVS 234 Query: 261 ----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 +F PKT R +++ Q + LK+ H +K E + +E + Q + Sbjct: 235 GKGLIFKEPKTKKSKRQISISQHVVNVLKK------HKQKQE---FQKEKLGVQYQDNNL 285 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 + VC KP +L ++ ++ A + R + + RHT A L+ G NP ++ Sbjct: 286 I----VCTDDGKP-LDPRNLLRQFYRLIEEANVPRISFHDLRHTHATILMQQGENPKVVS 340 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDE 401 ++GH + ++Y DD+ ++ Sbjct: 341 ERLGHSRVGITLDLYSHVSDDLQEQ 365 >UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridia RepID=XERCL_THETN Length = 391 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 51/286 (17%) Query: 150 RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL------QRNRIKPDPLS 203 + K +T++ ++N+ L + +A G+++ P G K + ++ + + S Sbjct: 125 QQGKSSKTIKALNNF---LKTFFNYAVDEGYLAKNPCTGKKIVIPGTPEEKIETEIETFS 181 Query: 204 KTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR---NLTIL 259 E + E+ KG + L+ A +GLR GEL L W D+D EK + V+R +TI+ Sbjct: 182 DEEIKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKELRVQRMIKQVTII 241 Query: 260 DMFGP---------PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 D G PKT IRTV + + LKE HR R E Sbjct: 242 DEKGNRKYKTIEQIPKTKNSIRTVPIPSSLIPMLKE----------------HRNRQREE 285 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAA---------VKRAGIRRRNPYHTRHTF 361 K K V++ N +K Y + LG +A+ + RAG+ R + RHT+ Sbjct: 286 KLKAGSVYL----NDVEKGYVFTTELGNTIDASNLLKTYKKILNRAGVPYRKFHAIRHTY 341 Query: 362 ACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 A L G ++ +GH + IY I + LN Sbjct: 342 ATKLFERGVPLKTVSELLGHSNISITANIYTHVIPKQKTNAVETLN 387 >UniRef50_B6FTU6 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTU6_9CLOT Length = 353 Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 54/320 (16%) Query: 101 NTMKKTKSQLKTLRIII------CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKK 154 NT ++ K+ +++ I + + P+S I I+ ++NELL+ E L NK Sbjct: 75 NTPRRRKTTIRSYNIALKHILPTFKDIPLSEINEKMIILWQNELLNTE---LSEVYINKI 131 Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL-SKTEFNALMES 213 RT+ Y A C L + PF+G++K+ + K + ++NA + Sbjct: 132 DTMFRTIYKYGAKRCGL----------RSNPFDGIEKIGKASNKSLHFWTHEQYNAFIPY 181 Query: 214 -EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL---DMFGPPKTNA 269 E+ ++ ++ Y G+R GEL AL D+DL++ I+++ ++L + D+ PPKT Sbjct: 182 IEQPTTRMAFQVLYYCGIRIGELFALTAGDIDLDEQIMHITKSLQRMERQDVITPPKTRK 241 Query: 270 GIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKP 329 GIR +TL ++ L+ +++ M CNG+ + Sbjct: 242 GIRDITLPNFLVKELE-----------------------------NYMSMIYDCNGETRL 272 Query: 330 Y-YSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 + S SL + A + R + RH+ L+ G +P IA ++GH+ ++ Sbjct: 273 FEISKQSLYYPMKKYSEIARVPRIRIHDIRHSHVALLIEKGVSPLAIAERLGHDDIKITL 332 Query: 389 EIYGMWIDDMNDEQIAMLNA 408 YG + E +LN Sbjct: 333 GTYGHLYPNKQREIADLLNT 352 >UniRef50_B6BNI8 Phage integrase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNI8_9PROT Length = 347 Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 95/400 (23%), Positives = 164/400 (41%), Gaps = 64/400 (16%) Query: 17 IWFMFRGKRCRETLKGWEITNSNIKKA-GNLRALIVHEINSGEFEYLRRFPQSSTGAKMV 75 I F + KR R +LK + T +N K A L IVH++N +F +T K V Sbjct: 3 ITFYHQSKRYRRSLK-LDDTKANRKLAESKLIPEIVHKLNQDKF-------LENTNVKKV 54 Query: 76 TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 T E I +I E + K K + I I I+ S+I ++ Sbjct: 55 PT-----VDEFMQISFEIHEAYRRPLSQKDYKFIYERHIKPIFGKRIIDEIKPSEIATWQ 109 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK---L 192 ++LL K + +++ +A+ + A I+ P +KK + Sbjct: 110 SKLL--------------KKLSTKSLTMILAVFNVMFNDALADELIARNPMSLIKKPKNI 155 Query: 193 QRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 N I P + E L+ + + + ++ ++G+R GEL AL W D+D E I+ V Sbjct: 156 SVNEILP--FKQDEIFKLLGHIQERMRAVFAIGFFTGMRTGELVALKWSDIDFENNIIKV 213 Query: 253 RR----NLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 RR N+ L PKT + IR + ++ L L+ K + H+ Sbjct: 214 RRAKRQNVESL-----PKTKSSIRDIDIIDILLPYLQNHLKFKLDDSEYMFNSLHKR--- 265 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTA 368 P C ++S+S W ++ I RNPY RHTFA +++ Sbjct: 266 -----------PFTC------FHSISR--TYWRPIFEKIDIAYRNPYQMRHTFASMMISN 306 Query: 369 GANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 G + +++ +GH + + +Y +I++ + ++ A L A Sbjct: 307 GEDILWVSKMLGHTNSAITLTMYARYIENKDKKRGAFLIA 346 >UniRef50_D1RC05 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RC05_9CHLA Length = 369 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 49/293 (16%) Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY-QSGFI 181 ++ I I R EL G T S K R+ TV+ Y+A L ++ + + G+I Sbjct: 107 LTKISSDLIAQCRQELAEGVT-------SKKTKRSHATVNRYLATLSTVFTYGINECGWI 159 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQN----LWKFAVYSGLRHGELAA 237 + P V K ++ + +++ EF L E K + AV +G+R GE+ Sbjct: 160 TDNPCRRVSKFTESKGRDRIVAENEFTRLFEECKNSRNEHLLPVVVLAVTTGMRRGEILG 219 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 L W+ ++L++ + ++ N RTV+++ ALE L+ Y+ +++ Sbjct: 220 LTWDCINLDRQTIILKET-----------KNGKQRTVSIVGEALELLRSHYQ-----KRN 263 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 T Y VF K + + W+ A+KRAGI+ + Sbjct: 264 PNTPY--------------VF-------PAKKRFGKICIRKAWDEALKRAGIQNLRIHDL 302 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHTF + GA+ +A+ MGH+T QMV M + + + +N R+ Sbjct: 303 RHTFCTYASETGASILELAAAMGHQTLQMVNRYTHMNQKKITHQLSSSVNERI 355 >UniRef50_Q6ALN4 Related to pore-forming cytotoxin integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6ALN4_DESPS Length = 407 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 102/398 (25%), Positives = 159/398 (39%), Gaps = 44/398 (11%) Query: 13 RYIRIWFMFR--GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSST 70 R+ RIWF FR G+R RE+ G T N + LI+ EI++G F + +RFP+S Sbjct: 9 RHNRIWFDFRYMGERVRES-SGLVDTRENRQILRRQLDLIMAEIDNGVFSFGKRFPRSRR 67 Query: 71 GA-------KMVTTRVIKT-FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 A + VTT + FG+ W + +T N ++ +S L+ + Sbjct: 68 RAFFAELEGREVTTHPSELLFGDYVLQWFADMGSGMTENQIRDYQSALQRHVLPYFRDLN 127 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + I + + + + G+ P S K+ R V I C + +A+ Sbjct: 128 FAEITSARMRKF-IATMKGKRSEQGQPLSAKRIRNVIIPLRVIIEDC-VDEYAWLD---F 182 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWED 242 PF K + + + P S E+ + + ++FAV +GLR E AL W Sbjct: 183 PDPFTRCKLPRPRKFRVQPFSFEEWQVFITHISPWYRPYFEFAVQTGLRPSEQVALKWVA 242 Query: 243 VDLEKGIVNVRR--NLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 +D E + + R D+ KT+ R + L L Q KLT S Sbjct: 243 IDHEYIHIELSRVRGREKEDL----KTHESRRRLLLRPGLRRILLRQRKLTAGI-NSPYV 297 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 F +++ + KL V W A ++ R Y TRHT Sbjct: 298 FVNKDRLPISQDKLRSVV---------------------WVEAFAGLELQYRRMYETRHT 336 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 FA W L G P ++A +GH MVY YG +I ++ Sbjct: 337 FASWALALGETPEWVAKTLGHVDTSMVYRTYGRYIPNL 374 >UniRef50_C0ZXC2 Putative integrase n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZXC2_RHOE4 Length = 413 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 81/334 (24%), Positives = 134/334 (40%), Gaps = 53/334 (15%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T G+L W E TT+ +K + +L + E TPI +R SDI + + L +G Sbjct: 61 TVGQLWQAW----EMSATTDGTRKVR-ELVGRNLGRLERTPIGKVRPSDIRTWVHSLRNG 115 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV---KKLQRNRIK 198 G TV N+ L A G + P EG+ +K+ R + Sbjct: 116 RPWV-----KGCTGLAPNTVGNFQGQLAGCFSMAVADGLLLKSPTEGIAKRRKVDRAISR 170 Query: 199 PDPLSKTEFNALMESEKGQSQN-------------LWKFAVYSGLRHGELAALAWEDVDL 245 + L+ E L+E+ Q + +GLR GE+A L VD Sbjct: 171 SELLNADEIWQLVETASAGVQTGRNWIASQKTLARMIIVGAATGLRAGEIAGLRIRSVDF 230 Query: 246 ---EKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 E + ++ T ++ P KT A R + L A+ AL ++ + + +S Sbjct: 231 LRRELAVTEQSKSGTSEFLWAPLKTAAASRVIPLPDAAIGALSDELRENPNSDRS----- 285 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT-RHTF 361 MP +Q+ +S S++G + A R G+ +H+ RH + Sbjct: 286 ----------------MPVFLTARQR-MWSSSTVGKSFQALRDRCGLDDEVTWHSLRHFY 328 Query: 362 ACWLLTAGANPAFIASQMGHETAQMVYEIYG-MW 394 A L+ AGA+ + ++GHE A+ E+Y +W Sbjct: 329 ASALIHAGASVKTVQVRLGHEKAETTLEVYAHLW 362 >UniRef50_A5TWD8 Possible integrase n=3 Tax=Fusobacterium RepID=A5TWD8_FUSNP Length = 353 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 74/324 (22%), Positives = 136/324 (41%), Gaps = 54/324 (16%) Query: 90 WTKIKETELTTNTMKKTKSQLKTL-RIIICESTPISHIRYSDILNYRNELLHGETLYLDN 148 + K++ ELT M + + ++I + TPI I N++N+LL Sbjct: 72 FKKLRIKELTYMNMSNILNSITYFDNLLISDITPIQ------ISNFQNDLLRKY------ 119 Query: 149 PRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ-RNRIKPDPLSKTEF 207 KG ++RT++ Y+ +L + + + +++ PF+ V +L+ + + D ++ EF Sbjct: 120 -----KGSSIRTINAYVKMLFT---WCVRYKNLTSNPFDMVDRLKLETKKRMDIITVDEF 171 Query: 208 NALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL---DMFG 263 N ++E L +K ++GLR GE AL +D+D ++V ++ T L + Sbjct: 172 NQIVEQVNNPDMKLMFKLLFWTGLRIGEARALKIDDIDFNNKTISVTKSYTNLSGKSIIT 231 Query: 264 PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVC 323 PKT IR + + L +K +Y K L F+ R Sbjct: 232 TPKTKGSIRVIKIDDVLLSEIK-------------------DYIDKAKYILDDNFIFRFN 272 Query: 324 NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHET 383 + + NA +K G R + RH+ A +L+ G + I+ ++GH Sbjct: 273 KASYRYNFK--------NATIKVLG-RDLRVHDLRHSHASFLINNGVDILLISKRLGHSN 323 Query: 384 AQMVYEIYGMWIDDMNDEQIAMLN 407 M +Y D +E I ++N Sbjct: 324 TAMTLNVYSHLYPDRENEAINLIN 347 >UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RA80_AMMDK Length = 383 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 21/272 (7%) Query: 146 LDNPRSNKKGRTVRTVDNYIAL-LCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSK 204 L+ R + KG+ T + AL L LR A + I P E V K ++ R +P L + Sbjct: 125 LEADRLDGKGKISPTTVRHAALVLNKALRDAVKKRLIPYNPMEAVDKPRKARKEPPALKE 184 Query: 205 TEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV----RRNLTIL 259 E LM + +G AVY+G R GE+ L W DVD E G + + +RNL Sbjct: 185 GELRRLMSAAEGTYLYAPITLAVYTGARLGEILGLRWRDVDFEAGCIFILQALKRNLKGE 244 Query: 260 DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM 319 F PKT R + + L AL++Q KL + + + +E G Sbjct: 245 LYFDEPKTPRSRRRIEIGPACLAALRKQKKLQAEWKLKAGSAW-QETG------------ 291 Query: 320 PRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 VC + + + + + GI N + RHT A LL AG + ++ ++ Sbjct: 292 -LVCTREDGSPIDPHAFSSAFRKLASKLGI-DANFHALRHTHATMLLKAGVHLKIVSERL 349 Query: 380 GHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 GH + + ++Y + M ++ L+ Sbjct: 350 GHASVAITGDLYSHVLPGMQGGAAQLVEEELN 381 >UniRef50_A6Q245 Site-specific recombinase, phage integrase family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q245_NITSB Length = 378 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 34/246 (13%) Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES 213 + +T +TV Y+ LL S+ A + G I P +K +P S E L+ + Sbjct: 133 RDKTPKTVRKYLNLLGSIFDTAIEYGVIKDNPARKIKLPVHIEKHKEPFSSDEVELLLST 192 Query: 214 EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP---PKTNAG 270 G +N A ++G+R GE+ AL +DV+L++ +NV + +G PKT Sbjct: 193 ASGWFRNYLAIAFFTGMRPGEIIALTKDDVNLKRRTINVSKA----RRYGKTTTPKTVYS 248 Query: 271 IRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPY 330 IR V +L + L +Q + + +++F N K + Sbjct: 249 IREVPILDALVPYLMDQIENSS----------------------YYLF----TNSKGDQF 282 Query: 331 YSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF-IASQMGHETAQMVYE 389 + L W ++++G+ R Y TRHTF +L +G +A +GH+ + + Sbjct: 283 WDAKKLHPYWKEVIEQSGLMYREMYATRHTFITAMLKSGYVSVMELAQIVGHKNSTEIMN 342 Query: 390 IYGMWI 395 Y +I Sbjct: 343 NYARFI 348 >UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KXE0_THERP Length = 316 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 113/243 (46%), Gaps = 19/243 (7%) Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES 213 +G +V++V N LL A + G + P + V + +R++ L+ E L+ + Sbjct: 52 QGLSVQSVQNTHPLLHRPFADAVKWGLLGRNPCDLVDLSRASRLQLRALTAPEVARLLAT 111 Query: 214 EKGQSQN-LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG----PPKTN 268 L AV SGLR EL AL W D+D E+ +V R+L + G PPKT Sbjct: 112 CADDPLGPLVTVAVLSGLRLRELLALQWGDIDWERSEPSVVRSLQRVRGQGLVVVPPKTA 171 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 A R V L ALEAL+ Q R+ ++ + G T + +VF V Sbjct: 172 ASRRRVPLSPLALEALRRQ-------RRHQVE-WRLAAGPTWAEG-DWVFT-SVRGVPLD 221 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 P + R++ ++RAG+ R + RHT A LL G +P +AS +GH T Q+ Sbjct: 222 PAETTR----RFHRLLERAGLPHRRFHDLRHTTASLLLADGVHPKVVASILGHSTVQVTL 277 Query: 389 EIY 391 ++Y Sbjct: 278 DVY 280 >UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTD1_9BACL Length = 379 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 28/274 (10%) Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 I SD+ + L+ + LD P SN RT+ + LL L A + G ++ Sbjct: 102 IELSDLRPQHLQALYRKLQSLDKPLSN------RTILHIHLLLHEALDRAVKWGMVARNV 155 Query: 186 FEGVKKLQ---RNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWED 242 + V + R I P F + E + + + AV +G+R GE+ L W + Sbjct: 156 ADAVDPPRPEVRRSIVWTPEDVRAFLSANEEAEARYYAAFVLAVMTGMRKGEILGLRWSE 215 Query: 243 VDLEKGIVNVRRNLTILDMFGP----PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 +D + +V + + LT GP PKT+ R+V L + AL+ + L R Sbjct: 216 IDWDSAVVRINQTLTWTKQ-GPILQEPKTDRSRRSVALSPETIVALRRHHALQAQER--- 271 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 Y EY K H + R NG+ P + +L W A+KRA + R + R Sbjct: 272 -LLYGTEY------KDHDLVFAR-PNGE--PLHP-RTLDNAWYRALKRANVPRIRFHDLR 320 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 HT A LL G +P ++ ++GH T + + Y Sbjct: 321 HTHASLLLAQGVHPKIVSERLGHSTINITLDTYS 354 >UniRef50_A1HTM7 Phage integrase family protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTM7_9FIRM Length = 393 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 20/243 (8%) Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE 214 G++ RTV ++L LR A + G + T P + V Q + PL+ E++AL+ + Sbjct: 132 GKSARTVQAVHSVLAMALRVARKHGLLRTLPTDDVAVPQVRKQDKRPLTPDEWDALLTAA 191 Query: 215 KGQSQNLWKFAV--YSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNA 269 + V +GLR GEL L W+D+D ++ ++NVRR + I + PKT A Sbjct: 192 QTAPDIFAALVVEWATGLRRGELLGLMWDDIDFDRCLINVRRAVQIRRGGCVLADPKTEA 251 Query: 270 GIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKP 329 R + + + ++ L+ HR ++ R Q VF Sbjct: 252 TKRVLPVPKEVMQVLRA-------HRARQMQC--RLAAGPAWQDCGLVF-----PTSGGT 297 Query: 330 YYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYE 389 Y + R+ K AG+ +H RH ++ AGA ++GH T +M+ + Sbjct: 298 LYDPRNWSKRFARIAKAAGLDI-GVHHLRHDLTSRIVAAGAPVKEAQYRLGHATVKMLLD 356 Query: 390 IYG 392 +Y Sbjct: 357 VYA 359 >UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_MOOTA Length = 390 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 75/325 (23%), Positives = 131/325 (40%), Gaps = 31/325 (9%) Query: 91 TKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPR 150 T + L +T + ++ L+ I S P+ ++ +DI + LY Sbjct: 80 TDYAKPHLRQSTWESYETVLRLHVIPTLGSIPLKKLQPADI----------QRLYASKLE 129 Query: 151 SNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNAL 210 S VR + +L + A +SG + P E K + + K PL+ + Sbjct: 130 SGLSPTRVRYIH---VVLHEAMSQARESGLLLQNPTEAAKPPRHPKKKVQPLNPEQVKRF 186 Query: 211 MESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPK 266 +E+ K + A+ +GLR GE+ L W+D+DL+KGI+ VR++L F PK Sbjct: 187 LETAKQDPLYPAFLLALGTGLRRGEILGLRWQDLDLQKGILQVRQSLIRTREGLKFEEPK 246 Query: 267 TNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGK 326 T R + L + ALK ++ Y H + P V NG+ Sbjct: 247 TEKSRRQIPLPPSVVAALKRHKAWVNQNKLILGPDYED----------HDLVFP-VENGR 295 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQM 386 + +N + +AG+ + RHT A LL G +P + ++GH T + Sbjct: 296 PR---DPKGFAEYFNRLLDKAGLPHIRLHDLRHTHATLLLLEGVHPKVVQERLGHSTVSI 352 Query: 387 VYEIYGMWIDDMNDEQIAMLNARLS 411 +IY + + ++ ++ L Sbjct: 353 TLDIYSHILPGLQEKAAERIDGLLQ 377 >UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQ70_ANATD Length = 325 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 33/248 (13%) Query: 159 RTVDNYIALLCSLLRFAYQSGFISTKPFEGV--KKLQRNRIKPDPLSKTEFNALMESEKG 216 +TV N ++ S L+ A + G+I+ E V K++R IK LS + +++ Sbjct: 77 KTVKNIHVIIHSALKQAIKCGYINQNVSEAVALPKVERPEIKT--LSSEQVTTFLQA--A 132 Query: 217 QSQNLWK---FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT-ILD--------MFGP 264 Q+ +L+ +Y+GLR GEL L W+D+D + ++V+R+L + D + P Sbjct: 133 QTDSLYPAFLLELYTGLRRGELLGLKWDDIDFDNCTIHVKRSLVRVYDHNLKKTTLLLQP 192 Query: 265 PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCN 324 PKT AG R + + + LKE Y+ E+ R + + +F + + Sbjct: 193 PKTKAGYRVIPIPDFVVAELKELYE---------------EHQRIKLSQPNFNSLNLMFV 237 Query: 325 GKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETA 384 Q + ++ +K+A + + RHT A LL +P + +GH Sbjct: 238 TTQGTPIDPRNFERKFKQLLKKANLPNIRLHDLRHTVATLLLQQNVHPKIVQEILGHRDI 297 Query: 385 QMVYEIYG 392 +IY Sbjct: 298 STTLDIYS 305 >UniRef50_C6J9M1 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9M1_9FIRM Length = 226 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 33/209 (15%) Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM--------FGPPKTNAGIR 272 L+ F + + LR GE+ L W+DVDLE G VN+ L ++ PK+ +G+R Sbjct: 28 LFVFILETALRVGEVCGLTWDDVDLEHGFVNITHQLQYNNVGKDACQYQILTPKSKSGVR 87 Query: 273 TVTLLQPALEALKEQYK-LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYY 331 V L A +AL EQ K +K+EI + FVF N + KP+ Sbjct: 88 NVPLSNAARDALMEQMKNQIEMDKKTEIEIDGYK---------DFVF----SNRQNKPFI 134 Query: 332 S------VSSLGARWNAAVKRAG-----IRRRNPYHTRHTFACWLLTAGANPAFIASQMG 380 + ++ + +N+ +K+ G + +P+ RHT + AG +P + MG Sbjct: 135 TQTIGRILNRIVDDYNSDIKKFGGTIEPLPHIHPHLLRHTSCSRMAEAGVDPRTLQDIMG 194 Query: 381 HETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 H + +M E+Y D+ +I LN R Sbjct: 195 HASMKMTMELYNHVTDERLTNEIQKLNNR 223 >UniRef50_C5UVC6 Site-specific recombinase, phage integrase family n=2 Tax=Clostridium RepID=C5UVC6_CLOBO Length = 385 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 80/320 (25%), Positives = 137/320 (42%), Gaps = 28/320 (8%) Query: 97 ELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGR 156 +L+ NT S++ T I + + I I + N+ N L+ N+K Sbjct: 81 KLSVNTRNDYLSRINTNLIPLLGNYKIKDISIDVVQNFYNTLI------------NEKHL 128 Query: 157 TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG 216 TV Y+ +L S L++A I P +KK++ + K + ++ E N + K Sbjct: 129 KPTTVKKYLDILSSCLKYAQSKDLIYKLPTSYIKKVKIQKPKIEYWNQEEVNFFLNYIKN 188 Query: 217 QSQNLWKFA-VYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD------MFGPPKTNA 269 F + +GLR GEL L W DVDL+ GI+ V L I D + KT++ Sbjct: 189 TYLYTPIFIDILTGLRIGELCGLRWCDVDLQNGIITVNHQL-IHDKRLKVLLLADLKTSS 247 Query: 270 GIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKP 329 R++T+ + ++ LKE K +E R+ + + L F +V K+ Sbjct: 248 SHRSITIPKILIDYLKE-LKANRQATNTEYVVLDRQDFKYIPRSLSMNFTKKVAKYKK-- 304 Query: 330 YYSVSSLGARWNAAVKRAGIR-RRNPYH-TRHTFACWLLTAGANPAFIASQMGHETAQMV 387 S+ + N V ++ ++ +H RHT A L+ G N ++ ++GH +M Sbjct: 305 --SIDDF-KKANEEVPHGYMQLKQISFHGLRHTHATLLIANGENVKVVSERLGHTDIRMT 361 Query: 388 YEIYGMWIDDMNDEQIAMLN 407 Y +D M + +LN Sbjct: 362 LNTYTHVLDSMKNNTANLLN 381 >UniRef50_A8RK44 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RK44_9CLOT Length = 366 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 80/337 (23%), Positives = 135/337 (40%), Gaps = 51/337 (15%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F + ++ K + L T+ + PI+ I+ +DI N++NEL++ Sbjct: 58 FKDFVALYMKDADPRLRETTLANKHYLFNKKVLPYFGEMPINAIKPTDIRNWQNELINYR 117 Query: 143 TLYLDNPRSNKKGRT---VRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL-QRNRIK 198 R N +G + +RT++N L + FA + + P + ++N + Sbjct: 118 -------RPNGRGYSPTYLRTINN---QLTAAFNFAVKFYGLRENPCHKAGTMGKKNADE 167 Query: 199 PDPLSKTEFNALMESEKGQSQNLWKFAV--YSGLRHGELAALAWEDVDLEKGIVNVRRNL 256 + EF +++ + + F V Y+GLR GEL AL ED+D ++ I++V +N Sbjct: 168 MLFWTNEEFKVFIKAMESRPVGYTVFMVMYYTGLRVGELLALTPEDIDFDRHIISVNKNY 227 Query: 257 TIL---DMFGPPKTNAGIRTVTLLQPALEALKEQY--KLTGHHRKSEITFYHREYGRTEK 311 L D PPKT AG R V + + LE+ + Y KL I Y R + Sbjct: 228 QHLNGKDYIYPPKTEAGYREVVMPK-VLESCLKDYLAKLYDVQPTDRIFPYDRGW----- 281 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 +G + +G ++ + RHT A L+ G Sbjct: 282 ------------------------VGRQMKYGCDHSGTQKIRVHDVRHTHASLLIDMGCT 317 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 P +A ++GHE Q E Y + E L+A Sbjct: 318 PLLVAERLGHERVQTTMETYSHLYPNKQSEVANQLDA 354 >UniRef50_Q3IEL8 Putative phage integrase n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IEL8_PSEHT Length = 383 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 96/424 (22%), Positives = 167/424 (39%), Gaps = 71/424 (16%) Query: 3 KLPTGVEIR------GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINS 56 K P GV IR ++ F ++ CRE + + +K AG I +EI Sbjct: 9 KPPPGVVIRYNSKGEATSFQLTFTYKSVLCREKVP-FIPNKQGLKSAGFFLGQIKNEIAH 67 Query: 57 GEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTM---KKTKSQLKT 112 F+Y + FP+S+ TT + +++ + E L +T+ KK K+ LK Sbjct: 68 DTFDYAKHFPKSNKVKLFTTTPNDAKVLDYMNLYIERGIERGLEKSTIAGYKKAKNGLKP 127 Query: 113 LRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLL 172 L IS + D++ +L+ T+ + +T+ N I+ L L Sbjct: 128 LW-----DCNISEVESIDVV----KLIEKSTV------------SRKTLSNRISFLRCCL 166 Query: 173 RFAYQSGFISTKPFEGVK---------KLQRNRIKPD--PLSKTEFNALMESEKGQSQNL 221 A I + P + ++ + D P + E ++ G ++ + Sbjct: 167 ARAVIDKLIKSNPVQNIRIGEYLPKINNIDSRGAHKDVYPFTPLEKAKIINGSSGTTRAI 226 Query: 222 WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD-MFGPPKTNAGIRTVTLLQPA 280 +G+R E AL DV L+ V++ I+D + KT AG R + + + Sbjct: 227 VSLVFNTGIRSSEWVALKKADVCLKTKQVSIYE--AIVDGIVKATKTKAGRRKIPISEDV 284 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW 340 + L + K K ++F+ N +Q+ + S RW Sbjct: 285 CDLLAIEMK---------------------KHDSEYLFL----NSQQRVWDQDSFRKNRW 319 Query: 341 NAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND 400 + G++ R PY RHTFA L++ G N ++ MGH + +Y+ YG +ID+ Sbjct: 320 IKLLDSCGVKYRYPYQMRHTFASQLISEGVNHWKVSKLMGHSSPNTLYQHYGSFIDEYER 379 Query: 401 EQIA 404 E A Sbjct: 380 EHNA 383 >UniRef50_A6TLJ2 Phage integrase family protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLJ2_ALKMQ Length = 382 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 29/244 (11%) Query: 163 NYIALLCSLLRFAYQSG----FISTKPFEGVKKLQRNRIKPDP----LSKTEFNALMESE 214 NYI+++ + L A++ FI P VK +R+ + D LS E N E Sbjct: 127 NYISMIHATLSTAFKMAVEWEFIRINPMTRVKVPKRDDQEMDKEIKTLSPEEVNRCAERL 186 Query: 215 KGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM-----FGPPKTN 268 +G + + A ++GLR GE++AL W D+D + +++V + L F PPKT Sbjct: 187 QGTHHYIPFMIAFHTGLRAGEVSALQWSDIDFDNQMLSVTKRLDYSASKENWEFKPPKTR 246 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 + RT+ + + LK + + +K+++ +YG+ H+ +C + Sbjct: 247 SSNRTIAIGNELITILKSH---SINQKKNKL-----KYGK------HYTENDFICTFENG 292 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 ++G ++ I N + RHT A LL AG NP + ++GH T + Sbjct: 293 EVVITKAIGRVSEIIIRDVKIDF-NFHMLRHTHATMLLEAGINPKVVQERLGHSTVSITL 351 Query: 389 EIYG 392 + Y Sbjct: 352 DTYS 355 >UniRef50_A6GBT9 Phage integrase n=2 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBT9_9DELT Length = 531 Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 18/235 (7%) Query: 150 RSNKKGR--TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEF 207 RS + G+ + T+ N++A+L +L+ A++ I P ++ ++ + + LSK E Sbjct: 230 RSKRTGKPLSASTIANHLAVLRRMLKVAHRWELIDRVP--DIQPPRKGTVD-NYLSKREA 286 Query: 208 NALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKT 267 AL+E +++L+ A+ +G+R GEL L DVDL G + VRR T PPK Sbjct: 287 QALLEHADPLTRDLFMLALRTGMRLGELRELRTGDVDLANGRIQVRRQRTQEGEVTPPKY 346 Query: 268 NAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQ 327 RTV + ALE L++ +L G RK + + Y + + R G + Sbjct: 347 GR-KRTVQVPADALEVLRK--RLAGLGRKELVFSKPKGYKAAHRGE-------RAAKGGE 396 Query: 328 KPYYSVSSLGARWNAAVKRAGIRRRNPYHT-RHTFACWLLTAGANPAFIASQMGH 381 +S L N A AGI R HT RHTFA + AG + ++ Q+GH Sbjct: 397 P--WSHKDLFNAVNRARAGAGIERSVGVHTLRHTFATHAVAAGVPLSLVSRQLGH 449 >UniRef50_A4XLL4 Phage integrase family protein n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XLL4_CALS8 Length = 360 Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 33/290 (11%) Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRS-----NKKGRTVR--TVDNYIALLCSLLRF 174 P ++I+Y D L + + TL N N+ +T+ +V ++L + L+ Sbjct: 76 PKTYIKYKDSLKHVRKAFPSHTLQQLNTFELQKFFNQLSQTLSQASVRKIYSVLNNALKT 135 Query: 175 AYQSGFISTKPFEGVK---KLQRNRIKP-DPLSKTEFNALMESEKGQSQNLWKFAVYSGL 230 A + + P E VK K + +IK D + +F ++ EK + A+++GL Sbjct: 136 AIKWNMLKENPLEFVKLPQKYEEKKIKVWDIETVKKFLEDIKDEKIHTA--VTLALHAGL 193 Query: 231 RHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQ 287 R GE+ L W++VD EK +++++ L + + PPK+ IRT+ + E L E+ Sbjct: 194 RAGEICGLTWDNVDFEKKCIHIKQALQKIGKEIIIKPPKSKTSIRTIYMTSYLYETLLEE 253 Query: 288 YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA 347 YK R+ + +++ G +FV + N Y++ + + V Sbjct: 254 YK-----RQEPLREAYKKLG-------NFVCIHETGNPFCPDYFTHT-----FKKLVSCL 296 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 G + RHTFA LL A NP A +GH ++ +Y +D+ Sbjct: 297 GYPEIRFHDLRHTFATILLQAQTNPKIAAEILGHSNTKLFLNLYAHVLDE 346 >UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WVH7_ALIAD Length = 391 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 26/256 (10%) Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL----SKTEFNALMESEK 215 TV +L + L A ++G++ PF V+ + ++ P P+ A + + Sbjct: 135 TVHRIHRVLKTCLLAAVKAGYLDKSPFLNVEPPE-HKTPPKPVLSVNDAFRLLAWLREHR 193 Query: 216 GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI----LDMFGPPKTNAGI 271 S A+++G+R GE+A L W D+DL+ G++ + R D GPPKT Sbjct: 194 PTSYMAAFLAIHTGMRMGEIAGLQWRDIDLDTGVIQLERTRYRPKGGQDFLGPPKTFGSR 253 Query: 272 RTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYY 331 R + + + ++ L+ ++K + + EI RE E F+ R+ N Sbjct: 254 RRIVVTREVVDELR-RWKQS----QQEI---ERESWTPES------FVVRLPNSAPP--- 296 Query: 332 SVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 S +S A K G+ + + RHT A WLL +G + ++ ++GH + + +IY Sbjct: 297 SPASFNNAIQNARKELGLPPVSFHGLRHTHATWLLESGVDLKIVSERLGHSSITITADIY 356 Query: 392 GMWIDDMNDEQIAMLN 407 D + E I L Sbjct: 357 AHVTDALQREAIEKLQ 372 >UniRef50_C5WEI1 Site-specific recombinase, phage integrase family n=9 Tax=Streptococcus RepID=C5WEI1_STRDG Length = 384 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 70/333 (21%), Positives = 142/333 (42%), Gaps = 36/333 (10%) Query: 81 KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 KT+ E+ + W + + + T +T + + + PIS I D N+ E Sbjct: 68 KTYNEIFEKWYQAYQDTVEPTTASRTLDIFRLHILPVMGDLPISKISPLDCQNFITE--- 124 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD 200 K + + + + + FA + + P + +R + + + Sbjct: 125 -------------KAKVFKNIKQIKSYTRKVFDFAIKMKLLKHNPMTEIIMPKRKKTRIE 171 Query: 201 PL----SKTEFNAL-MESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 EF A+ ++ E + L++ YSGLR GEL AL W D+D + ++V ++ Sbjct: 172 NYWTVQELQEFLAIVLQEEPYKHYALFRLLAYSGLRKGELYALKWADIDFQSETLSVNKS 231 Query: 256 LTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 L LD + K + +R + L + L+E +K K+++ + KQ Sbjct: 232 LGRLDGQAIEKSTKNDFSVRKIKLDSETISILQE-WKSINQKEKAQLAV----APLSIKQ 286 Query: 313 KLHFVFMPRVCNGKQKPYYS--VSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 F + R G +P ++ ++++ +R +++ +R+ +P+ RHT A ++ G Sbjct: 287 DFIFTYCTRT--GSIEPLHADYINNVLSR---IIRKHSLRKISPHGFRHTHATLMIEIGV 341 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 +P A ++GH ++QM + Y ++ D I Sbjct: 342 DPVNTAKRLGHASSQMTLDTYSHSTNNGEDRSI 374 >UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN2_9FIRM Length = 526 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 84/355 (23%), Positives = 145/355 (40%), Gaps = 35/355 (9%) Query: 60 EYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIIC 118 E L++ ++ TG+K R FGE D W + + ++ T ++++ I Sbjct: 49 EKLKQLRETMTGSKTEKVRPEMPFGEWLDFWYQNYVKPQIRPTTQANYEAKIYQHIIPEL 108 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNK--KGRTVRTVDNYIALLCSLLRFAY 176 P++ + D+ + + L R+ + KG + V A S L A Sbjct: 109 GKIPLNQLAQKDLQQFYARMKTAGRLI----RTEQFGKGLSDSMVRGLHAACRSALEKAV 164 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNA-LMESEKGQSQNLWKFAVYSGLRHGEL 235 Q G I T P G K + + L + E L++++ L+ + +GLR GEL Sbjct: 165 QEGLIRTNPAVGCKLPPKRGREMQVLGREELQRFLIQAQAEGYFELFLLDLCTGLRRGEL 224 Query: 236 AALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 AL W+D+D G + V + + + PKT A IR + L +E L+ Y+ T Sbjct: 225 LALQWDDLDFRTGALTVNKQVYEVKGRLQVSVPKTRASIRRLVLPPGVVEVLRA-YRETV 283 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 R ++F V K+ + ++ R ++RAG +R Sbjct: 284 DSR--------------------WMFPSPV---KEDVPMTPGAVRRRLQIILERAGCKRI 320 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 + RHTFA L G + +++ +GH +A +IY DM E A ++ Sbjct: 321 RFHDLRHTFATLSLENGMDVKTLSAMLGHVSAATTLDIYTHVTGDMQSEAAAKID 375 >UniRef50_D1SSC0 Putative uncharacterized protein n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SSC0_9BURK Length = 125 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 30/60 (50%), Positives = 42/60 (70%) Query: 340 WNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN 399 W A++ GIRRR Y T+HT+ L+ GANPA+IA QMGH+ A+M++ +Y WIDD + Sbjct: 37 WQPALRACGIRRRRAYQTQHTYGTNALSEGANPAYIARQMGHKNAKMLFIVYAKWIDDAD 96 >UniRef50_C5UUP0 Phage integrase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUP0_CLOBO Length = 391 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 74/322 (22%), Positives = 133/322 (41%), Gaps = 55/322 (17%) Query: 122 PISHIRYSDILNYRNELLHGE--------------TLYLDNPRSNKKGRTVRTVDNYIAL 167 P + +RY I YRN + + E Y +N K+G +V V + + Sbjct: 80 PSTQMRYETI--YRNHIKNSELSDIKIKEITSKDIQTYYNNKI--KRGCSVTLVKSIHKI 135 Query: 168 LCSLLRFAYQSGFISTKPFEGV----KKLQRNRIKPD----PLSKTEFNALMESEKGQS- 218 + +R+AY + FI K F K+ +++++ P + E + +G Sbjct: 136 ITPCIRYAYNNNFI-IKNFTSALILPKETEKDKLNKKSSVIPFTLEEQKKFISVIRGNKF 194 Query: 219 QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP-------------P 265 + ++ A+ SGLR GEL AL W+D++ + +NV +NL+++ P Sbjct: 195 EMIFLTALNSGLREGELLALTWKDINFKDKYINVNKNLSVVTEISKENGRGGSTLEVQTP 254 Query: 266 KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNG 325 KT GIR V++ ALK+ K +R FY+ + VF + N Sbjct: 255 KTKKGIRKVSIPSFLATALKQYKKQQIKNRLKMNQFYNDN---------NLVFCDELGN- 304 Query: 326 KQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQ 385 Y + + R+ ++ ++ + RHT+A L G + + S +GH Sbjct: 305 ----YLNRDKIVYRFKKVLEDNKMKEIKFHDLRHTYATRLFELGESAKTVQSFLGHSDIS 360 Query: 386 MVYEIYGMWIDDMNDEQIAMLN 407 + + Y +D M + + LN Sbjct: 361 VTLDTYTHVLDSMKETTASKLN 382 >UniRef50_B0PE10 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PE10_9FIRM Length = 395 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 34/258 (13%) Query: 148 NPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEF 207 + RSN VR V N S+ A G ++ P E K+ +R+ LSK E Sbjct: 128 SKRSNTAAEKVREVLN------SVFNGAIAQGLLAENPVENSKRYRRDIPDIKLLSKDEL 181 Query: 208 NALMESEKGQSQNLWK--FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT----ILD- 260 + + + K + A++ GLR GE+A L D D E+ V ++R L +D Sbjct: 182 HLFLNTAKNYEICFLEILLALFGGLRRGEIAGLHISDFDFERETVFIQRQLVWEYDWVDG 241 Query: 261 -------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK 313 + PPKT +GIR +TL L+ R I R+YG + Sbjct: 242 KRSNGHWVVKPPKTESGIRILTLPSVIFSVLR--------RRIQRIEEDKRKYGNRYRDS 293 Query: 314 LHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPA 373 + CN P S L A+ + G+ + + RH FA +L+ G + Sbjct: 294 GYI-----SCNEMGYP-REYSFLTAKMKKICLQLGLSVISAHDLRHMFATFLVEKGESIH 347 Query: 374 FIASQMGHETAQMVYEIY 391 ++++ MGH++ + + +Y Sbjct: 348 YLSALMGHKSEETTFVVY 365 >UniRef50_C2YK72 Phage integrase n=3 Tax=Bacillus cereus group RepID=C2YK72_BACCE Length = 387 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 23/179 (12%) Query: 220 NLWKFAVYSGLRHGELAALAWEDVDLE-------KGIVNVRRNLTILDMFGPPKTNAGIR 272 +L+ F +GLR GE AL WEDVD E K ++N +R+ IL FGPPK + R Sbjct: 195 SLFMFLSRTGLRIGECLALQWEDVDFEEQKLFINKTLINTKRSEKIL--FGPPKNKSSKR 252 Query: 273 TVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYS 332 T++L + LK+ K+ + + + Y+++Y +FVF + P Sbjct: 253 TISLDPSTISHLKKM-KIEQNKQVLKNGKYYKDY--------NFVFTHEDNSCMLHP--- 300 Query: 333 VSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 SSL A+ K+ + + RHT A LL +GAN +++ ++GH + M +Y Sbjct: 301 -SSLKFLLEAS-KKGNFKYITLHGFRHTHAVHLLQSGANIKYVSERLGHSSIDMTANVY 357 >UniRef50_C2DBH8 Phage integrase family site specific recombinase n=16 Tax=Enterococcus faecalis RepID=C2DBH8_ENTFA Length = 389 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 25/268 (9%) Query: 145 YLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSK 204 ++D R K T T+ + ++ ++ A + I + G K N ++ SK Sbjct: 136 FIDKLRQENK-YTESTIQTWHKIVMRMINAAVHNQIIPSNTLTGFKFDLSNNVRS--FSK 192 Query: 205 TE---FNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM 261 E F A++E+E Q+Q ++ + SG+R GEL L W D+DL + ++ N T D Sbjct: 193 KELQRFIAVLENEDIQTQVIFLTLLKSGMRKGELMGLRWSDIDLNEKYFDI--NSTRGD- 249 Query: 262 FGP--PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM 319 +G PKT IR V +L L ++YK +H K + RE G K +F+ Sbjct: 250 YGENKPKTKTSIRKV-YFDNSLLTLIKKYK---NHEKERL---FRE-GIILSDKDYFILS 301 Query: 320 PRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 R KQ S + + ++A ++ + RHT A +L+ AGAN ++++++ Sbjct: 302 SRNLPIKQ------SRITYMFRLLCEKAEVQNITVHGLRHTHATFLIEAGANIKYVSTRL 355 Query: 380 GHETAQMVYEIYGMWIDDMNDEQIAMLN 407 GH+ + ++Y + + E M++ Sbjct: 356 GHKNINITLDVYSDVLKEEEKETADMMD 383 >UniRef50_A6P1V8 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P1V8_9BACE Length = 409 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 32/249 (12%) Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNA-LMES 213 G TVR + +L S L+ A + I P + + + + + + + L E+ Sbjct: 147 GSTVRRIH---MVLSSALKQAVKERIIPYNPCDNCRIPPKEKKEMAIIPSEKLGVYLSEA 203 Query: 214 EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAG 270 EK ++ + SGLR GEL AL W+D++++ I++V + +T +D + PKT Sbjct: 204 EKYGVLPMFFLELSSGLRRGELLALRWDDLNVKDRILSVSKQVTRIDGELVITEPKTKNS 263 Query: 271 IRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPY 330 +R V L Q A++ L +++ H + I F PR Y Sbjct: 264 VRKVALSQQAVDILVREHE---QHPDNPILFPS----------------PRTGG-----Y 299 Query: 331 YSVSSLGARWNAAVKRAGIRRRNPYHT-RHTFACWLLTAGANPAFIASQMGHETAQMVYE 389 +S ++ + +AGI R +H RHTFA L++G + ++S +GH +A + Sbjct: 300 WSPDAVSRINRKLLAKAGIEERVRFHDLRHTFATMALSSGVDVKTLSSMLGHYSAGFTLD 359 Query: 390 IYGMWIDDM 398 Y +DM Sbjct: 360 TYTHITNDM 368 >UniRef50_A4J1T6 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1T6_DESRM Length = 383 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 19/248 (7%) Query: 159 RTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS 218 RTV + +L L A Q ++ P + V+ + + + + + + ++++ K Sbjct: 129 RTVQYHHRVLKEALSHAVQWQLLNRNPADAVQAPKNKQKEIELPDLSNIDRMIQASKDHP 188 Query: 219 QNLWKF-AVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL----DMFGPPKTNAGIRT 273 ++ AV++G+R GEL L W+D+D +K ++ VR L L F PK+ R Sbjct: 189 DHIIIISAVFTGMRRGELLGLRWQDLDFDKNLLYVRNTLQRLPDKGKFFTEPKSKKSRRQ 248 Query: 274 VTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSV 333 + + LK+ HRK ++ + + H + PR P Sbjct: 249 IIIPHFLTNLLKD-------HRKKQLE---ERFKLGHLYQDHDLVFPRPDGTPADP---- 294 Query: 334 SSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGM 393 ++ R+ A V + G+ + RH A LL NP + ++GH+T + ++Y Sbjct: 295 GTVSHRFKALVDKIGLSGLRFHDLRHFHATLLLAENINPKKVQERLGHQTISLTLDVYSH 354 Query: 394 WIDDMNDE 401 I M +E Sbjct: 355 LIPSMQNE 362 >UniRef50_C2F0I9 Transposon integrase n=3 Tax=Firmicutes RepID=C2F0I9_LACRE Length = 410 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 95/383 (24%), Positives = 159/383 (41%), Gaps = 78/383 (20%) Query: 71 GAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSD 130 G ++V+ ++ T ++ DIW +K+ L +NT K I ++ +D Sbjct: 61 GIRLVSMKM--TLNDVYDIWEGLKKG-LKSNTFNNYKYMYNHFVRNDLGQYKIRTLKVTD 117 Query: 131 ILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE-GV 189 I + N+L+ + +G V ++D ++ +L A Q + + G+ Sbjct: 118 IRRFYNKLV------------DVRGLKVSSLDTIQLIIHQVLDLAVQDDLVRKNVSDNGL 165 Query: 190 KKLQRNR----IKPDPLSKTE----FNALMESEKGQSQNLW--KFAVY--SGLRHGELAA 237 ++L+R R I L+ + N L ++K + W FAV +GLR GEL Sbjct: 166 RELKRMRGIDSIPRKSLTIEQQNLFLNYLQNTDKYKH---WYPTFAVMLGTGLRVGELTG 222 Query: 238 LAWEDVDLEKGIVNVRRNLTILDM-------FG--PPKTNAGIRTVTLLQPALEALKEQY 288 L WED+D + ++ V L + FG PKT AG RT+ +++ EAL++Q Sbjct: 223 LRWEDIDFKNNLIKVNHTLVFYERSKSSKTGFGINTPKTKAGFRTIPMIKTVREALQKQ- 281 Query: 289 KLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG 348 + +K +I G + F+F+ R + V + G N A+KR Sbjct: 282 --QTYLQKEQIRSVDNIDGFRD-----FIFLNR--------FGHVQNQGP-LNKALKRI- 324 Query: 349 IR-------RRNP-------------YHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 IR +NP + RHTF L+ +G N I + +GH Q Sbjct: 325 IRDCNFAELDKNPSINNDCLLPNFSCHVLRHTFTTRLVESGMNVKVIQNVLGHSDIQTTL 384 Query: 389 EIYGMWIDDMNDEQIAMLNARLS 411 IY DM ++Q L +S Sbjct: 385 NIYADVTRDMKNQQFNQLEDFIS 407 >UniRef50_UPI0001BC466B phage integrase family protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC466B Length = 355 Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 90/343 (26%), Positives = 143/343 (41%), Gaps = 59/343 (17%) Query: 82 TFGELCDIWT-----KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 TF L D++ +++E L T K L + + ES +R ++N Sbjct: 57 TFQSLYDLYIEDMQPRLREHTLLTKKKIIEKKILPFFKDMTLESITAVRVR-----AWQN 111 Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRF-------AYQSGFISTKPFEGV 189 LL+G T + +NP S RT+ + A+ +RF +++G I K E Sbjct: 112 TLLNGVTRH-NNPYSQTYIRTI--CNQLTAIFNYAVRFHSMRENPCHRAGTIGKKRAE-- 166 Query: 190 KKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 ++N P+ K F AL+E K S ++ ++GLR GEL AL+ +D+D E Sbjct: 167 ---EKNIWTPEEFEK--FVALIE-HKIPSYTAFQILFWTGLRIGELLALSIKDIDFENKA 220 Query: 250 VNVRRNLTIL---DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 + V ++ L D+ PKT G RTV + LE +++ K R Y Sbjct: 221 IVVNKSYQRLGSRDVITAPKTEKGKRTVDISDELLEIIEKYLK--------------RLY 266 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 + +L F + K Y AVK AG+++ + RH+ A +L Sbjct: 267 KPKKTDRL-FPYTKHTFENDMKEY------------AVK-AGVKKIRLHDLRHSHASFLF 312 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 G + IA ++GHE Q E Y N E +LN + Sbjct: 313 NNGIDIITIALRLGHEEVQTTLETYTHLYKKANTELRNLLNKK 355 >UniRef50_C7D286 Phage integrase n=3 Tax=Enterococcus faecalis RepID=C7D286_ENTFA Length = 383 Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 45/258 (17%) Query: 152 NKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK-------KLQRNRIKPDPLSK 204 N+KG ++ TV N ++ S+ A +I + P +K K I D L+K Sbjct: 127 NEKGLSIETVSNRHNIVKSMFLEALDMQYIHSNPTRNIKLTGQVPEKKSNKTISIDDLTK 186 Query: 205 TEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM--- 261 + AL+ E S+ +Y+G R+ E+AAL W+ +D ++ + +N D Sbjct: 187 FK-EALLSRENTTSKYFILVQLYTGARYQEVAALTWDSIDESNEVIKI-KNAYKYDAGQY 244 Query: 262 -FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL------ 314 GP K+ AG+R + + S + +Y ++Y +K+K+ Sbjct: 245 RIGPTKSEAGVRNIDV-------------------PSSLFYYLKKYEMEQKKKILRGDLR 285 Query: 315 ---HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 +FVF+ + K S SS+ + A I R + + RH + L+ A A+ Sbjct: 286 NPQNFVFVSK----KNSWPISNSSVNKYIKETCELANIERISSHSFRHARSDLLILAEAD 341 Query: 372 PAFIASQMGHETAQMVYE 389 P +I +Q+GH+ YE Sbjct: 342 PIYIKTQLGHKEIIQSYE 359 >UniRef50_D2BJR0 Site-specific recombinase, phage integrase family n=2 Tax=Dehalococcoides RepID=D2BJR0_DEHSV Length = 385 Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 83/313 (26%), Positives = 130/313 (41%), Gaps = 49/313 (15%) Query: 118 CESTPISHIRYSDILNY-------RNELL-----HGETLY---LDNPRSNKKGRTVRTVD 162 C + P + RYS I+ R EL H + Y L R + G + +TV Sbjct: 80 CNTAPRTFERYSQIVRLHLTPNLGRIELTQLRPEHIQAYYSKALSGGRVSGGGLSAQTVK 139 Query: 163 NYIALLCSLLRFAYQSGFISTKPFEGV-----KKLQRNRIKPDPLSKT-EFNALMESEKG 216 ++ +L L A + G ++ V +K + + I P+ +S E A ME G Sbjct: 140 HHHRVLSEALNHAVKWGLLARNVAMAVDPPRPEKREMHTIAPEDMSVLFEEAAKMEKNSG 199 Query: 217 QSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGI 271 L + A+++G+R GE+ AL W D+DL K + VR +L L + PKT Sbjct: 200 LPYELIFMTALHTGMRRGEILALRWSDIDLAKSKIYVRCSLQCLKNGEIIIREPKTPGSR 259 Query: 272 RTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK----LHFVFMPRVCNGKQ 327 R V++ LE KL H S + G+T + HF P N Sbjct: 260 RLVSMTPSLLE------KLIIHKESSSANMILQ--GKTLQGDSLVFAHFDGTPINPNTVS 311 Query: 328 KPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMV 387 + ++ KRAG+ R + RH+ A +LTAG +P ++ ++GH T Sbjct: 312 PAFAKIA----------KRAGLNLRL-HDLRHSHATLMLTAGVHPKIVSERLGHSTVAFT 360 Query: 388 YEIYGMWIDDMND 400 + Y I + D Sbjct: 361 LDTYSHVIPGLQD 373 >UniRef50_D0XDY6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XDY6_VIBHA Length = 457 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 11/248 (4%) Query: 153 KKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALME 212 K+G+ + ++ LL ++ AY SG +T ++ L+ P P ++ E L+ Sbjct: 130 KQGKKGKVINGCYTLLRAVCSKAYSSGHQATDLMNNIENLKVVSDDPFPFTEDEVRNLLV 189 Query: 213 SEKG--QSQNLWKFAVYSGLRHGELAALAWEDVDL--EKGIVNVRRNLTI---LDMFGPP 265 ++ S+ + F + + LR EL +WE+V+ E+ I R + + L+ + Sbjct: 190 TDTDFLMSKEMVAFGIVTALRISELICTSWENVEFYTEESIEKCRLYVDLAKPLNNYKVT 249 Query: 266 KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNG 325 KT RT+ L A + L+ +TG I R+ +++K F+F Sbjct: 250 KTEESERTIELSAEAAQILRRLEPVTGSKASISIDVVQRDNITIKREKRRFIFFNEQTG- 308 Query: 326 KQKPYYSVSSLGARW-NAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETA 384 P+ + ++ A + AG+ R P RHT A G + A+IA +GH Sbjct: 309 --YPWLNPKQFAKQFFTAFLSNAGVAHRGPNQLRHTGASIQFNNGVSVAWIAELLGHRDV 366 Query: 385 QMVYEIYG 392 +V + Y Sbjct: 367 SIVEKHYA 374 >UniRef50_A5ZQX5 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQX5_9FIRM Length = 407 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 77/279 (27%), Positives = 120/279 (43%), Gaps = 37/279 (13%) Query: 139 LHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK-LQRNRI 197 +H + LY D +KG + T+ Y +L L+ A S I P +G +K + + Sbjct: 118 IHVKRLYADLL---EKGYSPGTIRAYHIILSECLQAAVDSDMIRKNPAKGSRKGIDKEVS 174 Query: 198 KPDPLSKTEFNALMESEKGQSQ-----NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 + L+ E ++E K + L FA+ +GLR GEL L W+D+DLEK +++V Sbjct: 175 RKRALTIEEQETMLEFTKNSNSYKIHYPLIVFALSTGLRVGELGGLLWDDIDLEKNMIHV 234 Query: 253 RRNLTILDMFG--------PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 RR L ++ G P KT AG R + L + A +AL +Q R+ ++ R Sbjct: 235 RRQLVYRNLDGTGCKFHIQPLKTEAGERDIPLTKTAKKALMKQ-------REYDLLLGKR 287 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL----GARWNAAVKRAGIRRRNPY---HT 357 + +FVF+ N + P S+L A +K+A P+ H Sbjct: 288 AKEQPVAGLKNFVFLNHQGN-QLAPQVLDSALRNIIKAYNKKELKQADKEHGEPFLLPHI 346 Query: 358 -----RHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 RHTF +G + + MGH M E Y Sbjct: 347 SAHILRHTFCTRAAESGVDVKSLQYIMGHADITMTMERY 385 >UniRef50_C8VWS4 Integrase family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS4_DESAS Length = 381 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 24/327 (7%) Query: 90 WTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNP 149 W + +L+ +T ++ + +K I + P++ ++ I + ++ L G DN Sbjct: 69 WFDTHKADLSPSTARRYEGIIKQHLIPSLGNIPLAKLQPLQIQEFLSKELEGGRQ--DNK 126 Query: 150 RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNA 209 ++ G + +V+ +L L A IS P + VK + + LS+ + Sbjct: 127 KTVGAGLSAASVNYEYRVLHKALNQAVDWQLISRNPADLVKVPKPEKKDMVVLSEQDIAR 186 Query: 210 LMESEKGQSQNLWKF-AVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP---- 264 L+ K + F A+Y+G+R GE+ W+D+DL +GI++VR+ + P Sbjct: 187 LLNEIKDNYLYIPTFLAIYTGMRLGEVLGSTWKDIDLNRGILSVRQASCQVKADDPEFKA 246 Query: 265 PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCN 324 PKT R + + Q ++ L+E H+K++ + + L VC Sbjct: 247 PKTAKSKRNIDISQTVVKTLRE-------HKKTQTKWKLVAGSNWQDNNL-------VCA 292 Query: 325 GKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT-RHTFACWLLTAGANPAFIASQMGHET 383 + + SL + + R G+ +H RHT A LL AG P + ++GH T Sbjct: 293 LQDGRPINPPSLSSYFRRVASRIGLFVS--FHALRHTHASLLLKAGIQPKIVQERLGHST 350 Query: 384 AQMVYEIYGMWIDDMNDEQIAMLNARL 410 + +IY + M + L+ L Sbjct: 351 IAVTMDIYSHVMPGMQRQAANKLDDML 377 >UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X726_NAKMY Length = 371 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 107/254 (42%), Gaps = 26/254 (10%) Query: 144 LYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP-DPL 202 L +D R + KG+ RTV A L + L AY+ + T+ + +++R P +PL Sbjct: 120 LMIDGLRKDGKGK--RTVQYVHATLRAALEHAYREELV-TRNVAKMVRVERPTPTPKEPL 176 Query: 203 SKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD- 260 S E L+ + + + LW + GLR E+ L W++VDLE ++V ++ +D Sbjct: 177 SVAEARRLLTATRDDEDHALWVVMLLLGLRRSEVCGLRWDNVDLENRTLSVTHSVQRVDG 236 Query: 261 --MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVF 318 P KT RTV L A+ Q +T + Y E K+ Sbjct: 237 KLRELPTKTRRSTRTV-----PLPAMVHQALVTHRAAMMPTSQYLPEPVYVFGTKIGTPM 291 Query: 319 MPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQ 378 PR +L RW +R GIRR + RH+ LL G +P + Sbjct: 292 EPR-------------NLTRRWVTLAERQGIRRVPLHALRHSCVSLLLAQGVHPRTVMEI 338 Query: 379 MGHETAQMVYEIYG 392 +GH +M +YG Sbjct: 339 VGHSAIEMTMNVYG 352 >UniRef50_B5E8A2 Integrase family protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5E8A2_GEOBB Length = 436 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 28/182 (15%) Query: 226 VYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALK 285 + +G+ EL L ED+ E +NVR + + + KT R + + Q A++ Sbjct: 247 ILTGMIPSELGGLKREDI--EGDYINVRSSYVLGEEKKSLKTAFRKRQIFITQ----AIR 300 Query: 286 EQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVK 345 E+ ++ ++ +VF+ + +GK+ ++ S W AV Sbjct: 301 ERLQII-----------------LDRSSSPYVFI--MEDGKR---FNSSRFSKLWQKAVL 338 Query: 346 RAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAM 405 AGI Y RH+FA W L G NP + + MGH + QMVYE+YG +++ + D+ M Sbjct: 339 TAGIPYVTSYSARHSFAAWSLIIGVNPLRLVNLMGHASKQMVYEVYGNYVEGLEDDAEEM 398 Query: 406 LN 407 L+ Sbjct: 399 LD 400 >UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MP49_ANATD Length = 373 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/328 (22%), Positives = 140/328 (42%), Gaps = 42/328 (12%) Query: 81 KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPIS-HIR--YSDILNYRNE 137 KTFGEL D+W NT+ K + L T + S+ I+ HI+ D+ N+ Sbjct: 61 KTFGELLDLWL---------NTVAKNRVSLSTFQ---SYSSSIALHIKPFLGDV--ELNK 106 Query: 138 LLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI 197 L + + +KG + + ++ L +A + I P + V ++ Sbjct: 107 LTAMDLQKYYQHITGEKGLSSTLALYHHRIIHQALDYAVRMNMIEKNPADYVDPPRKRSY 166 Query: 198 KPDPLSKTEFNALMESEKGQSQNLWK---FAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 +P + ++ + + N+W A+Y+G+R GE+ AL W+D++LE+G + V + Sbjct: 167 QPSIWDEDTIKRALDIFR--NTNIWVPVLLAIYTGMRIGEITALKWDDINLEQGYIVVSK 224 Query: 255 NLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 L ++ + + + R V + +E LK+ + +++ YH E Sbjct: 225 TLMKINRQLYIKEKGENKSSYRIVAISSNVIEELKQWRRKQEQYKEKLKELYHNE----- 279 Query: 311 KQKLHFVFMPRVCNGK-QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 F+ +G+ Q P Y + + +++ G+ + + RHT A LL G Sbjct: 280 ------GFVCTFEDGRVQDPKY----ITKVFQKTIEKHGLPKIRFHDLRHTHASLLLKHG 329 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDD 397 +P I+ ++GH T IY D+ Sbjct: 330 VDPKHISDRLGHSTITTTLNIYSHVFDE 357 >UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDT0_9CLOT Length = 462 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 24/277 (8%) Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK--KLQR 194 E H + L P +G +T++++ LL S+L A Q I + P + VK KL+R Sbjct: 186 EAFHIKLQELFTPVDADRGLAAKTINSHHRLLSSMLNTAVQWQIIFSNPCDRVKPPKLER 245 Query: 195 NRIK-PDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 + D + ++ E Q Q + +Y+G+R GEL L W D D+E ++ ++ Sbjct: 246 KEARYLDEKQTAQLITCLQREPEQYQTMVLLLIYTGMRRGELCGLEWPDFDMEHKLLYIQ 305 Query: 254 RNLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 R L G KT + R + L A++ L Q+K + ++++ + G+ Sbjct: 306 RESLYLPDRGIFEDTTKTYSSTRVIKLSDEAVKLLI-QHKFAQNAERAKLGDAWVDTGK- 363 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 +F C G KP + +L ++ V++ + + + RHT A L+ G Sbjct: 364 -------IFT--TCTG--KPIHP-DTLTTWFHKFVQKNDLPPVSVHSLRHTNATLLIANG 411 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWI---DDMNDEQI 403 N +A ++GH ++Y I D+M E I Sbjct: 412 VNLTTVAGRLGHADTGTTTKVYAHAIKTADEMAAETI 448 >UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W9U7_9FIRM Length = 370 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 105/254 (41%), Gaps = 35/254 (13%) Query: 152 NKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP-----FEGVKKLQRNRIKPDPLSKTE 206 NKK + + L L +FA G+ P + ++K Q++ + + K E Sbjct: 117 NKKSQEIADFKLINIYLNRLFKFAINQGYTDYNPCLNIIYPTIRKEQKD-MSLEYWDKEE 175 Query: 207 FNALMESEKGQSQNLW----KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL--- 259 + K +W K A Y+GLR GE+ AL W D+D + + V ++L++ Sbjct: 176 LKEFLYHAKKDLDQMWYLFFKIATYAGLRKGEILALTWNDIDFKNKTLTVNKSLSVTRQS 235 Query: 260 -DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVF 318 PKT + IRT+++ + ++ L + E+ KL Sbjct: 236 KKAITSPKTKSSIRTISIDKTTIKELYN--------------------WKIEQSKLKLQN 275 Query: 319 MPR-VCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 + + + KQ +++S R+ +K+ +R+ + RHT A AG + Sbjct: 276 INQYIFTTKQSELINLNSPRKRFERVIKKHDLRKIRLHSLRHTHASLCFEAGMTIKDVQH 335 Query: 378 QMGHETAQMVYEIY 391 ++GH T++ IY Sbjct: 336 RLGHSTSKTTMNIY 349 >UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCF9_THET1 Length = 357 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 105/255 (41%), Gaps = 37/255 (14%) Query: 156 RTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES-E 214 R R ALL L A + G ++T P + V+ + R +P ++ + L+ + E Sbjct: 121 RLPRRAQEAYALLHKALADAVRLGLLATNPLDRVEPPKHQRRRPTLPARDQIALLIAALE 180 Query: 215 KGQS---QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG-----PPK 266 G++ L F + SG R GE L W DVD ++G V + R L L++ G PPK Sbjct: 181 AGKAGWYSELLLFLLGSGCRIGEALGLEWGDVDWQEGSVRISRQL--LEVGGEVHESPPK 238 Query: 267 TNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGK 326 + AG R + L ALEAL++Q +K + G T ++ + VC Sbjct: 239 SRAGERVIALPAFALEALRQQRA-----KKLGKYCFLSSTGTTPCRRNVLRALHAVCAEL 293 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQM 386 P + L RH A L AG P S++GH + + Sbjct: 294 GLPRLRIHDL---------------------RHVHASLLAHAGVPPKVAQSRLGHSSPMV 332 Query: 387 VYEIYGMWIDDMNDE 401 ++Y +D + E Sbjct: 333 TLQVYQHVLDGADRE 347 >UniRef50_UPI0001BCCDB9 integrase family protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCCDB9 Length = 344 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 87/361 (24%), Positives = 141/361 (39%), Gaps = 50/361 (13%) Query: 60 EYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 E L+ P T M + F E D + K + T K+ + + Sbjct: 18 EVLQGLPAIQTQPAMKGESI--AFKEYGDKYMNDKSRTVAKTTHSKSACLYRVQLLPAFG 75 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 P++ I S + + N + D+P S + T+ LL S++ A Sbjct: 76 EQPLAAITRSQVQGFVNAMA-------DHPYS------METIKATKCLLSSIMALAASDQ 122 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLW---KFAVYSGLRHGELA 236 I P + VK + K S EF LM++ +G LW +GLR GE+ Sbjct: 123 LIPVNPCKAVKLPKVEPNKKRAPSMEEFKRLMKASEGH--RLWIAIPLLFLAGLRLGEML 180 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDMFG------PPKTNAGIRTVTLLQPALEALKEQYKL 290 AL WED+D+++ +++V + ++ + G PKT AG R++ + LK Sbjct: 181 ALTWEDIDMKERLIHVSKTWSVENGSGKAYLKDSPKTKAGRRSIPIGDDLYTMLKRYRTN 240 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 G + I R + H P+V GK Y+ ++A + + Sbjct: 241 EGKGKNVVIP------KRDADEYTH----PQVFRGKVFKYWC-------YDADLP----K 279 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 P+ RH FA L AG NP + GH + ++Y D ++DE M+ AR Sbjct: 280 DITPHSGRHYFAYHLYAAGVNPETLRHITGHSDITTLLDVY-CHTDKLSDE--TMIQARN 336 Query: 411 S 411 S Sbjct: 337 S 337 >UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MR26_ANATD Length = 400 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 39/276 (14%) Query: 153 KKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV---KKLQRNRIKPDPLSKTE-FN 208 ++G ++ T+ +L S L A ++G ++ E K + I+ L + + F Sbjct: 132 QEGLSISTIKQIHTVLHSALDQALKNGLVNRNVSEATTLPKGKPKREIRILSLEEQQRFI 191 Query: 209 ALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT---ILD----- 260 A +E E+ ++ L + A SGLR GEL AL W+DV+ + G + VRR+L I D Sbjct: 192 AALEGERLKTAFLVELA--SGLRIGELLALRWKDVNFKDGYIEVRRSLQRVRIFDGGNSK 249 Query: 261 ----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 F PKT AG R V L +E LK+ HRK ++ + E L F Sbjct: 250 KTALAFQEPKTEAGKRIVPLPPVIIEELKQ-------HRKKQLEEKLKAGALYEDNDLVF 302 Query: 317 ---VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT-RHTFACWLLTAGANP 372 + P ++ +Y + ++AG+ + +H RHT+A LL A +P Sbjct: 303 ATELGTPIDPRNFERLFYRIR----------EKAGLDKSVNFHALRHTYATRLLEANEHP 352 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 + +GH+ IY + ++ LN+ Sbjct: 353 KVVQELLGHKDISTTLNIYSHVMPEIKKAAAMKLNS 388 >UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NXL1_9BACE Length = 397 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 15/260 (5%) Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP--LSKTEFNALME 212 G T+R YI + ++ + A + I+ P +GV+ + R D L++ E + ++ Sbjct: 129 GSTIRQA--YITM-GTMFKAAKMNDVIAKHPMDGVRYTKPVRAVDDIKFLTRQEQSLFLQ 185 Query: 213 SEKGQSQNLWKFAVY--SGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMF-----GPP 265 + K +S N +++A+ +GLR GEL L W+ VDLEK + V + L GPP Sbjct: 186 AAK-KSHNYYQYALILETGLRTGELIGLTWDAVDLEKRTLTVNKTLEFRHGLHTWRAGPP 244 Query: 266 KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVC-- 323 KT RT+ L A E L+ + ++S + EY + + M + Sbjct: 245 KTQHSYRTIPLTDRACEILQSVWNSRDTRKESPLLSQTLEYIDRRTGSIAKLVMRDLVFI 304 Query: 324 NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHET 383 N + SS AGI+R + RHT+A + +G P + +GH + Sbjct: 305 NWRTGEPAKNSSYDTHLYKICDEAGIKRFCMHALRHTYATRAIESGIQPKVLQKLLGHAS 364 Query: 384 AQMVYEIYGMWIDDMNDEQI 403 + + Y D D+ + Sbjct: 365 IKTTMDWYVHVTTDSLDQAV 384 >UniRef50_A7WY94 Integrase homolog n=25 Tax=Firmicutes RepID=A7WY94_STAA1 Length = 397 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 35/244 (14%) Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFN---ALMESEKGQSQ----NLWKFAVYSGLR 231 G +T P + + +++ + K + +K EF +L+ E +LW F +G+R Sbjct: 148 GITTTNPSKIIGNVKKQKSKIEFWTKEEFEKVISLIYKEDYYQHFLFISLW-FLFMTGMR 206 Query: 232 HGELAALAWEDVDLEKGIVNVRRNLTILDM----FGPPKTNAGIRTVTLLQPALEALKEQ 287 GE A+ WED+D + G++ + + L + F PKT A +R + L + L L E Sbjct: 207 IGEATAIQWEDIDFDSGVLTINKTLYYKNQSNYRFVEPKTKASVRHIVLDKCTLTYLSEW 266 Query: 288 YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA 347 ++ + +++ + NG +++S R+ K A Sbjct: 267 KEVQQNLIQTDFVMSY--------------------NGIPTQKHTLSYAIERY---AKLA 303 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 GI R + RH+ A L++ G NP I ++GHE + YG + N E LN Sbjct: 304 GIHRIRIHGLRHSHASLLISMGENPLIIKDRLGHEDIETTLGTYGHLYPNSNFEVANKLN 363 Query: 408 ARLS 411 +S Sbjct: 364 GAIS 367 >UniRef50_A7HZQ7 Bacteriophage-related integrase n=3 Tax=Campylobacterales RepID=A7HZQ7_CAMHC Length = 385 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 42/250 (16%) Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD------PLSKTEF 207 +G ++ Y + L R+A + IS PF + + ++ + +P P S E Sbjct: 154 RGLKDSSISGYCSFFKMLFRYAINNDLISKNPF-FIPRFKQ-KYEPQETDKFVPFSLDEI 211 Query: 208 NALMESEKGQSQNLW-KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPK 266 L+ + + L+ A ++G R GE+ AL + D+D + + + + L+ L + PK Sbjct: 212 LTLIRNAGDEELRLFLVVAFFTGARTGEIFALTYADLDFKNRQIRINKTLSDLGVIDSPK 271 Query: 267 TNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGK 326 T + R + +L KE KL H+ +I KL Sbjct: 272 TKSSNRVIDMLDI---VYKELIKLNNAHKDEQIF------------KL------------ 304 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQ-MGHETAQ 385 S S + ++N ++ G +R Y TRH+FA +L+ G P ++ + MGH+ Sbjct: 305 -----SRSMIRVKFNNLQEKLGYNKRRLYDTRHSFASVMLSRGEEPMWVGCKMMGHKDLN 359 Query: 386 MVYEIYGMWI 395 Y Y ++ Sbjct: 360 ETYRSYAKYL 369 >UniRef50_UPI0001C31A42 integrase family protein n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A42 Length = 452 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/347 (23%), Positives = 141/347 (40%), Gaps = 61/347 (17%) Query: 79 VIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNEL 138 + TF E W +E E+ T++ + L + T + I + + +YR Sbjct: 90 ALPTFHEFATDWLARREGEVAPRTVEYERWALTHHLLPHFAHTLLDAIDIATVDDYRRAK 149 Query: 139 LHGE-----TLYLDNPRSNKKGRTVRT--------VDNYIALLCSLLRFAYQSGFISTKP 185 + + + P +GR+ T ++ I +L ++L A + G I+ P Sbjct: 150 VAESDRRRTAIEVGRPLRAGRGRSAPTLRPLSPGSINKTIDVLQAVLALAREYGHIADNP 209 Query: 186 FEGVKK-LQRNRIKPDPLSKTE-FNALMESEKGQSQN----------LWKFAVYSGLRHG 233 G ++ L+ ++ +P L E AL+++ + + +++GLR Sbjct: 210 ATGRRRRLKASKPRPVHLDAAEPIQALLDAAATLDADTRHRMRDRHAIIATLLFAGLRAH 269 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 EL L W D+DL + V R+ KT+AG RT+ LL P L A LT H Sbjct: 270 ELCQLRWRDIDLTNARLQVSRS----------KTDAGRRTIELL-PILRA-----TLTAH 313 Query: 294 HRKS------EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSS--LGARWNAAVK 345 R+S ++ F G+ EK L N +P V+ L R + + Sbjct: 314 KRRSRATDPDDLVFPTGTGGQREKDNLR--------NRVLQPTIPVADRLLAERDHPPLP 365 Query: 346 RAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 R G+ P+ RHT+A L+ G +PA + +Q+GH Y Sbjct: 366 R-GL---TPHKLRHTYASILVACGTDPATVMAQLGHTDPHFTLRAYA 408 >UniRef50_A0AGT2 Complete genome n=7 Tax=Bacilli RepID=A0AGT2_LISW6 Length = 386 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 52/289 (17%) Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVD-NYIALLCSLLRF----AYQ 177 I I DI ++ +EL T R+++K + T+ YI + LR A + Sbjct: 113 IRDISSQDIEDWMHELSQTAT------RNSRKQEEITTLSRTYINRILGHLRIILNRAVK 166 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFN---ALMESEKGQSQN---LWKFAVYSGLR 231 G I P + V + K + EF A++ Q+Q+ +++ Y+GLR Sbjct: 167 EGLIERNPVDSVSYFPKENNKVEFWEIEEFQKVMAMIPENSIQNQHRKIIYEMLFYTGLR 226 Query: 232 HGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTL---LQPALEAL 284 GEL AL+WE+V+ EK + V + L F PKTN RT+++ L L+ Sbjct: 227 IGELQALSWENVNFEKNQITVEKTLIYQGKNDWYFSTPKTNKSYRTISIGKTLSKRLKKW 286 Query: 285 KEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW-NAA 343 +E ++ G +F +M ++ +G P YS S+ W + Sbjct: 287 QELQRMIG----------------------NFEYMSQL-DGTFTPSYSFSN----WLKDS 319 Query: 344 VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 ++AG+ + RH+ L+ P I ++GH Q+ YG Sbjct: 320 ARKAGVIPIKLHALRHSHVALLIDQNIQPLVIQERLGHANIQITLGTYG 368 >UniRef50_C0X7V2 Integrase family protein n=1 Tax=Enterococcus faecalis TX0104 RepID=C0X7V2_ENTFA Length = 376 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 84/337 (24%), Positives = 141/337 (41%), Gaps = 48/337 (14%) Query: 85 ELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETL 144 E W K+KE ++ +T+ K ++ + I+ IR D +N+ NE+ Sbjct: 65 EYLSSWIKLKEKQVKKSTLAKLNRAIRLHILPQFAYYKITEIRRIDCINWVNEMC----- 119 Query: 145 YLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS-GFISTKPFEGVK--KLQRNRIKPDP 201 ++ + +Y + S L A I + P + +K K ++ + Sbjct: 120 ---------THLSIESAKSYCSTFNSALEDAVNDFKLIDSNPMKNIKYPKTEKRKTAIQF 170 Query: 202 LSKTEFNALM---ESEKG-------QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVN 251 K E L+ ES KG Q L +GLR GE AL WEDV +K V+ Sbjct: 171 FEKRELQNLLVTAESYKGTKPFINYQYYVLTFLLARTGLRLGEALALKWEDVTEDKLTVS 230 Query: 252 ---VRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKE-QYKLTGHHRKSEITFYHREYG 307 R N + PKT + RT+ L + +E LK + K H KS ++E+ Sbjct: 231 KTLYRENNQ--NFITTPKTISSYRTIILDKKCIELLKSFKIKKIEHSLKSNAFILNKEFV 288 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLT 367 T+ K F+ + CN + + ++ +L A + + +P+ RH+ A LL Sbjct: 289 FTD-SKGDFL---KQCNYRT-YFTTICTL----------ADVPKLSPHALRHSHAVHLLE 333 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIA 404 +G+N F++ ++GH T M +Y M E I+ Sbjct: 334 SGSNIKFVSERLGHHTINMTANVYLHVSKKMETESIS 370 >UniRef50_C3WEM5 DNA integration/recombination/invertion protein n=2 Tax=Fusobacterium RepID=C3WEM5_FUSMR Length = 350 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 62/317 (19%) Query: 82 TFGELCDIWTKIKETEL-TTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 TF E+ D+W + + ++ + T++ K +L+ L P++ ++ +DI Y + L Sbjct: 73 TFKEITDLWFESYKKKIGSPKTLETNKYRLRFLE-------PLNDMQITDIKLYHLQKLI 125 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR-IKP 199 E +D S K G ++L + +A+++ FIST + ++ ++ + I+ Sbjct: 126 DE---IDTSWSFKNGCK--------SVLNMIFEYAFKNDFISTNKVKFIELGKKEKVIER 174 Query: 200 DPLSKTEFNALME-----SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 ++ E L E + G+ + +Y+G+R GEL L ED+DLE + VR Sbjct: 175 KIFTQKEIEILWENLNSKTYHGKYTYIILILIYTGMRIGELFNLKTEDIDLENRTIKVR- 233 Query: 255 NLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL 314 KT+AG+RT+ + K+ + G Sbjct: 234 ---------VSKTSAGVRTIPIFSKIFNLFKDNL-IIGQE-------------------- 263 Query: 315 HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF 374 +FV G S ++ R+ +K GI+ + TRHTFA L A AN Sbjct: 264 YFV------KGDTTTQLSYATFKPRFKKLLKELGIQEHTIHDTRHTFATMLNNANANSTS 317 Query: 375 IASQMGHETAQMVYEIY 391 I +GH IY Sbjct: 318 IIRLIGHSNFSTTENIY 334 >UniRef50_A8RCT4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCT4_9FIRM Length = 375 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 27/245 (11%) Query: 168 LCSLLRFAYQSGFISTK---PFEGVKKLQRNRIKPDPLSKTEFNALMES-EKGQSQNLWK 223 L SLL FAY+ +I F+ V + ++ + D EF +E + L+ Sbjct: 151 LKSLLAFAYEKSYIKNMHILSFKKVINIDESKKEVDFWQPEEFYKFIEVVDDIVYLTLFN 210 Query: 224 FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM-FGPPKTNAGIRTVTLLQPALE 282 + GLR GE AL W D+D K + + ++ + PKT RTV + + Sbjct: 211 VLYWCGLRIGEALALNWNDIDFNKKTIRINKSYSDYKHRITNPKTQNSYRTVIMPDKCFD 270 Query: 283 ALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNA 342 A+ + ++ H K I F +++Y HF +KP + ++ R + Sbjct: 271 AVSKLFE----HDKQIIGFDNQKYI------FHF----------EKP-LNQDTIKIRKDR 309 Query: 343 AVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQ 402 + +A ++R + RH+ L+ G + IA ++GH + MV +YG W + ++ Sbjct: 310 WIAKAHVKRIRIHDLRHSHVSLLINLGFSAFDIAKRLGH-SVDMVNNVYGHWFQNAQNKM 368 Query: 403 IAMLN 407 + LN Sbjct: 369 VDKLN 373 >UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=15 Tax=Bacillus RepID=Q65EQ4_BACLD Length = 364 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/299 (22%), Positives = 126/299 (42%), Gaps = 51/299 (17%) Query: 104 KKTKSQLKTLRIIICESTP------ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRT 157 +K S LKT II P I++IR DI+ ++N+LL Sbjct: 78 RKASSYLKTSSIINTHLIPRFGSKKINNIRSRDIMRFQNDLL--------------DRYA 123 Query: 158 VRTVDNYIALLCSLLRFAYQSGFISTKP--FEGVKKLQRNRIKPDPLSKTEFNALMESEK 215 V V +L ++ FA + + P G ++ ++ + + EF A ++ Sbjct: 124 VAHVKKIHQVLSAVFNFAIKQEYTKDNPARLAGNVDIEEDK-HINYWTLDEFKAFIQHVD 182 Query: 216 GQ-SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD-MFGPPKTNAGIRT 273 Q L+ YSG+R GEL AL W D+D + +N+ + T+ + + PKT + IR Sbjct: 183 DQLYYALFMTLYYSGMRKGELLALTWGDIDFDSNTINIDK--TVYNRIVTKPKTTSSIRK 240 Query: 274 VTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSV 333 + + + + L + T K+++T+ V G+ + S Sbjct: 241 IMMPKHVMRLLAQLKAKT----KTKMTY--------------------VVFGEFHDHIST 276 Query: 334 SSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 ++L ++ VK A +++ + RH+ A +L+ P+ +A ++GH+ IY Sbjct: 277 TTLDRKYAEYVKAAKVKKIRLHDFRHSHASYLINRNTIPSVVAKRLGHKDVGTTLNIYS 335 >UniRef50_A2V4W2 Phage integrase n=5 Tax=Gammaproteobacteria RepID=A2V4W2_SHEPU Length = 388 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 79/384 (20%), Positives = 151/384 (39%), Gaps = 47/384 (12%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVT------ 76 G R RE K T N+ A + EI+ G F+Y FP+S + Sbjct: 20 GCRFREGTKMLA-TPKNLATAKTTLKKMNAEIDLGCFQYRDYFPKSKKVTQFEQLQREKH 78 Query: 77 -TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 R F + W + K+ + ++ L I +T ++ I S + YR Sbjct: 79 PDREYPFFNDFAYQWFERKKATWKNSYRNTMQNVLDKYLIPQFGNTLMNEITLSQVDFYR 138 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 +L+ + + DN R + R ++N + + S++ A + + P + L+ Sbjct: 139 QQLM--QMVKADNTRQ----LSNRRINNLLWPIVSMVSLAAEE-YKFEYPLRRYRSLKEE 191 Query: 196 RIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 + + P++ E + + ++ + ++G+R E+ L W+ VD ++ +R+N Sbjct: 192 KAESHPMTIKEVKLFLSHVPPEWKDYFIIRFWTGMRSCEIHGLEWQHVDFNHRLIRIRQN 251 Query: 256 LT---ILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 + D+ KT R + + +A K L SE F Sbjct: 252 WVNGEVCDV----KTPKSRRDLKMCDTVYDAFKRIKNLA----LSESGF----------- 292 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 V GK + + W + +AG++RR Y TRHT A + A N Sbjct: 293 ---------VFTGKSDAPLDTHFVSKKLWYPTLIKAGLKRRRAYETRHTAAVLHIAALEN 343 Query: 372 PAFIASQMGHETAQMVYEIYGMWI 395 P +I+ +GH ++++++Y ++ Sbjct: 344 PLYISQMLGHSDTRLLFDVYAPYV 367 >UniRef50_B8DWT8 Phage integrase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DWT8_BIFA0 Length = 406 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 23/263 (8%) Query: 168 LCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKT--------EFNALM--ESEKGQ 217 L ++R AY I P + V+ ++R ++ P +T EF + E + G+ Sbjct: 145 LAQIMRKAYLEELIERNPCDAVEDIKRPKVSPQKRKETRITKEQALEFVHKLKNEPQDGR 204 Query: 218 SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLL 277 +W + +GLR GE AL WEDVDLE + +R+ + PKT RT+++ Sbjct: 205 IVAVW-LGLATGLRRGEALALVWEDVDLENARLRIRKQYGKEKVLKDPKTAKSRRTISID 263 Query: 278 QPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG 337 +E L ++K +E+ +E L P + ++ +Y L Sbjct: 264 NQTVEFLT-KWKTKQAGLFAEVGLTLQESSPVCSNDLCVFLDPDNFSRWRRKFYVEEGLA 322 Query: 338 --ARWNAAVKRAGIRR--RNPY------HTRHTFACWLLTAGANPAFIASQMGHETAQMV 387 A + + R GI R R+ Y R A L+ G +P + +++GHE+ Sbjct: 323 HYAHESTYIDRRGIERVKRSGYIGPNFQALRRAQATLLVAGGVDPKTVQARLGHESLNTT 382 Query: 388 YEIYGMWIDDMNDEQIAMLNARL 410 IY + + ND + A +L Sbjct: 383 LNIYAEEVGE-NDRKAADFMGKL 404 >UniRef50_Q1CPK0 DNA integration/recombination/inversion protein n=7 Tax=root RepID=Q1CPK0_STRPB Length = 362 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 36/181 (19%) Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRR--NLTILDMFGPPKTNAGIRTVTLLQPALEALK 285 +GLR E+ L W+D+D E G +++ + + +I FGP K IR V + + +LE L+ Sbjct: 202 TGLRFAEVQGLTWKDIDFENGYIDINKTFDYSISQNFGPTKNEQSIRKVPIDKNSLEILR 261 Query: 286 EQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVK 345 + +Y + K + RVC G +S A N +K Sbjct: 262 N---------------FKSDYYQDNK-------LGRVCFG--------ASNNAT-NKVIK 290 Query: 346 RAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM---NDEQ 402 R R + RHT+A +L+ G + ++ +GHE + ++Y I+ + ND Q Sbjct: 291 RVTGRNLTNHSLRHTYASYLIAQGVDLISVSKLLGHENLNITLKVYAHQIESLKEKNDHQ 350 Query: 403 I 403 + Sbjct: 351 V 351 >UniRef50_Q1CP24 DNA integration/recombination/inversion protein n=7 Tax=Streptococcus RepID=Q1CP24_STRPF Length = 387 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/357 (23%), Positives = 133/357 (37%), Gaps = 63/357 (17%) Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 S G+ + VIKTF EL +W + + + T T ++L + + + I Sbjct: 62 SNGSTIKRKVVIKTFKELSHLWLETYKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITA 121 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 SDI N L Y+ NY A+ + + Q + + Sbjct: 122 SDIQMLINRL---SKYYV----------------NYTAVRSVIRKVLQQGVLLGLIDYNS 162 Query: 189 VKKLQRNRIKP---------DPLSKTEFNALMESEKGQSQNLWKFAVY------SGLRHG 233 + + R +P DP F +E+ + + NL+ AV +GLR G Sbjct: 163 ARDIILPRKQPNAKKKVKFIDPSDLKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIG 222 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTI-LDMFGPPKTNAGIRTVTLLQPALEALK----EQY 288 E AL W D+DLE G + + + L KT +G R +++ + L +LK Q Sbjct: 223 EACALEWGDIDLENGTIAINKTYNKNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQR 282 Query: 289 KLTGH--HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKR 346 +L R SE+ F + Y++ S + + K Sbjct: 283 QLFNEVGARVSEVVF----------------------ATPTRKYFNASVRQSALDTRCKE 320 Query: 347 AGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 AGI R + RHT A LL AG + + ++GH M + YG D E + Sbjct: 321 AGIERFTFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYGHLSKDKEKEAV 377 >UniRef50_Q4KFM1 Integrase n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KFM1_PSEF5 Length = 154 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 16/162 (9%) Query: 243 VDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 +DL +G V RR+ + + KT R V LL PA +AL++ L + + Sbjct: 1 MDLAQGTVTFRRS-KVRGAYRVTKTRRSTRKVRLLAPAWDALQKIDALNRKRKAETVDIV 59 Query: 303 HREYGRTEKQKLHFVF------MPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 R+ + KLHFVF +P V + + + L A AG+ P Sbjct: 60 ERDNKTVRQHKLHFVFLNTKSGLPHVSDFVVRDRFFKPHLLA--------AGVYYHGPGQ 111 Query: 357 TRHTFACWLLTAG-ANPAFIASQMGHETAQMVYEIYGMWIDD 397 R+T+A LLT G A+ +IA QMGH A M+ + YG WI++ Sbjct: 112 CRNTYASQLLTTGVASIDWIAEQMGHTNANMIRQHYGTWINE 153 >UniRef50_C0W4G9 Phage integrase family protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W4G9_9ACTO Length = 437 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 104/253 (41%), Gaps = 35/253 (13%) Query: 150 RSNKKGRTV--RTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP--LSKT 205 R KG T +T+ ALL S+L ++G I T G+K L R+ I D L+ T Sbjct: 158 RGRTKGSTPSYKTLRGAQALLSSVLEHQVRAGTIPTNVARGLK-LPRDGIVRDKVFLTPT 216 Query: 206 EFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR-----RNLTILD 260 +F L++ + L GLR GE AL D+DL+ VR + Sbjct: 217 QFATLLDCVPDAHKPLVSTLYGLGLRFGEATALTPADLDLDAAQPVVRVTKAWKEGKKGS 276 Query: 261 MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMP 320 G PKT IRTVT+ + L+EQ + +K + YG +Q F Sbjct: 277 YLGSPKTRRSIRTVTVPPSLIPILREQAR----KKKPGALLFPNAYG---EQITSGAFHA 329 Query: 321 RVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT-RHTFACWLLTAGANPAFIASQM 379 RV W AV +G+ H RH+ A L+ AG I ++ Sbjct: 330 RV-----------------WQPAVAASGLDPAPRVHDLRHSHASALIAAGIPLPVIQRRL 372 Query: 380 GHETAQMVYEIYG 392 GHE+ Q ++YG Sbjct: 373 GHESIQTTVDVYG 385 >UniRef50_Q1D2W1 Site-specific recombinase, phage integrase family n=7 Tax=Myxococcales RepID=Q1D2W1_MYXXD Length = 334 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 76/275 (27%), Positives = 116/275 (42%), Gaps = 53/275 (19%) Query: 150 RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP---------D 200 RS K +++T++N + +L LL A + G I P R+KP D Sbjct: 83 RSEPKPLSLKTINNVLTVLHKLLTLAEEHGVIRQAP----------RVKPFGKLPKPPFD 132 Query: 201 PLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 LS E + L+ + + + L + A+ +GLR GEL L W D+ L +G+++VRR + Sbjct: 133 FLSFEEADQLLAVAEPEWRTLLRVAIKTGLRQGELIGLRWHDLTLTRGLLHVRRTI-WRG 191 Query: 261 MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMP 320 + G PK RTV L ++AL HR+ GR FVF Sbjct: 192 IEGLPKGGRE-RTVDLPASVVDALNAHR-----HRR----------GR-------FVF-- 226 Query: 321 RVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR----NPYHTRHTFACWLLTAGANPAFIA 376 C +P + + A A++ AGI R + RHT+ L G I Sbjct: 227 --CQEDGQP-LTKGKMAAPLGRALRAAGITREVGQIGWHDLRHTYGSHLAMRGIPLKVIQ 283 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 +GH T +M Y D E +A+L+ L+ Sbjct: 284 ELIGHATIEMTNR-YAHLSPDTRREAVAVLDRPLA 317 >UniRef50_Q30SF2 Phage integrase n=2 Tax=Campylobacterales RepID=Q30SF2_SULDN Length = 369 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 30/240 (12%) Query: 159 RTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS 218 RT +Y++ + S++ A + ++ + + P S E + L+E G Sbjct: 132 RTKKDYLSCIKSVIDIAMDAEIVNKNVATDITFKASEKELIHPFSTDEVSLLLEKSHGMF 191 Query: 219 QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQ 278 +N A+++G+R GE+ L +D+ ++ + ++R+++ PKT IR + Sbjct: 192 RNYLGIALHTGMRSGEILGLMHQDILNDR--ITIKRSIS-KGRITTPKTIGSIRDI---- 244 Query: 279 PALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA 338 P EA+K + G KS F H VF+ S Sbjct: 245 PMFEAVKPFIESQGKLSKSLYLFEHDG-----------VFIK-----------DASFFKR 282 Query: 339 RWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF-IASQMGHETAQMVYEIYGMWIDD 397 RW+ V+ GI R Y TRHTF +L +G IA+ +GH + +M+ + Y +I D Sbjct: 283 RWHQLVEDCGIEYRKLYSTRHTFITAMLNSGKFKIMEIAAIVGHTSPEMIIKNYAGFIKD 342 >UniRef50_B0TI08 Phage integrase family protein n=14 Tax=root RepID=B0TI08_HELMI Length = 368 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 81/390 (20%), Positives = 157/390 (40%), Gaps = 60/390 (15%) Query: 26 CRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGE 85 C K W T KK G + S +Y R F + +G FG Sbjct: 14 CAFRYKDWTGTTRQHKKRGFAK-------KSDAVQYERDFIKKQSGG------CDMAFGS 60 Query: 86 LCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLY 145 + +++ + +T L T + K + + + + + P++ I + + ++N LL E+ Y Sbjct: 61 MVELYMEDCKTRLRPTTYEGKKYLIDSKILPVFKDMPVNAITPATVRKWQNGLLDDESDY 120 Query: 146 LDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL-QRNRIKPDPLSK 204 ++T++N ++ + + R Y + T P + ++N + Sbjct: 121 --------SPTYLKTINNQLSAIFNYARRYYG---LQTNPAAVCGSIGKKNAESMQFWTT 169 Query: 205 TEFN--ALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL--- 259 EF A S+K S ++ ++G+R GEL AL D+D E +++ ++ + Sbjct: 170 DEFRLFAAAISDKPASYAIFNTLFWTGMRSGELLALTLNDIDFESKKISITKSYARVGNE 229 Query: 260 DMFGPPKTNAGIRTVTLLQPALEALKEQY-KLTGHHRKSEITFYHREYGRTEKQKLHFVF 318 D+ PPKT R +T + LE LK+ +L + + Y + + +E Sbjct: 230 DVISPPKTPKSRRVITASEFLLEILKDYAGRLVDYEPSDRLFDYTKHFLASE-------- 281 Query: 319 MPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQ 378 M R C K +G+++ + RH+ A L+ G +P I+ + Sbjct: 282 MARGC---------------------KLSGVKKIRIHDIRHSHASLLIELGFSPLLISER 320 Query: 379 MGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 +GHE+ + + Y + + E L+A Sbjct: 321 LGHESVETTLQTYAHLYPNKHGEVADKLDA 350 >UniRef50_Q636X3 Phage integrase n=18 Tax=Bacillales RepID=Q636X3_BACCZ Length = 381 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 18/196 (9%) Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL-----TILDMFGPPKTNAGIRTVT 275 +K + +G+R GE AAL W+D++L++ + + + L T ++FG KT RT+ Sbjct: 195 FFKALLNTGMRKGEAAALQWKDINLKEHTITISKTLDFTAKTKEELFGDTKTFTSKRTIM 254 Query: 276 LLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSS 335 + + ++ L K ++ Y E L VF RV +GK P S+ Sbjct: 255 IPKSLVDELLAHKKWQNANKLVLQDAYEHE--------LDLVF-SRV-DGKFLP---KST 301 Query: 336 LGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 L ++ +K+A + R + RHT A LL +GA+ +I ++GH++ ++ +Y Sbjct: 302 LFNAFSRILKKANLPRLEIHSLRHTHAVLLLESGASMKYIQDRLGHKSIEITSNVYSHIS 361 Query: 396 DDMNDEQIAMLNARLS 411 D +N + I+ A ++ Sbjct: 362 DKINKDSISGFEAYMN 377 >UniRef50_D0IYY1 Phage integrase n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IYY1_COMTE Length = 175 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 8/165 (4%) Query: 220 NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQP 279 NL F +SGLR E+ AL W+ +D K V + + + + KTN R V+L Sbjct: 18 NLIAFRFFSGLRTSEMVALRWQSIDCNKMQVLTHKAV-VKGLRKQAKTNKA-RLVSLNSR 75 Query: 280 ALEALKEQYKLTGHHRKSEITF-YHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA 338 AL+AL+ Q + T + + R+ + Q + M +K +++ Sbjct: 76 ALDALERQKEQTPRAQLGNVAGDVMRQTTPKDSQTVFVKPMHGEPWADEKRFHN-----P 130 Query: 339 RWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHET 383 W +K GIR R P H RHT+A LL AGA PA+ A QMGH Sbjct: 131 FWVPVLKALGIRYRLPNHMRHTYATMLLMAGATPAYAAKQMGHSV 175 >UniRef50_B6WRS3 Putative uncharacterized protein n=2 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WRS3_9DELT Length = 350 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 37/235 (15%) Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQ 219 TV + +L S LR+A +G ++ P +G+K + + P + E +ME + Sbjct: 128 TVRLRLGILRSALRWAVTTGRLAANPLDGMKLPRVRSRRASPPTAAEGRKMMEVAAPHIR 187 Query: 220 NLWKFAVYSGLRHG--ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLL 277 + +Y G R G EL L W DVDL+ +N M K + L Sbjct: 188 RIIAIGMYCGPRIGPSELFRLRWADVDLDAAQLN---------MPSASKADGPDGRFVPL 238 Query: 278 QPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG 337 + L AL +++ + + P V + +P V S+G Sbjct: 239 RGDLVALMRRWQ----------------------DEDSAIGCPWVIHYHGRP---VKSVG 273 Query: 338 ARWNAAVKRAGIRRR-NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 A W++A + AGI+RR PY RH F L GA+ +A MGH + M+ E Y Sbjct: 274 AAWHSARRAAGIQRRIVPYSLRHAFPTMALEHGADIGSLAEIMGHTSKSMILEHY 328 >UniRef50_A7VZ12 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VZ12_9CLOT Length = 414 Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 23/252 (9%) Query: 152 NKKGRTVR--TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNA 209 ++K +TV+ +V +Y A++ L++A ++ ++ V + ++N +P L E Sbjct: 136 SEKLKTVKPNSVIHYHAVIHQALKYAMKTDLVAQNVAMKVDRPKKNDFQPVFLDAAELQH 195 Query: 210 LMESEKGQSQNLWKF-AVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG----- 263 L + KG L A + GLR GE+ L W+ +D E+G + ++R +T +++ G Sbjct: 196 LFDVVKGTKLELPVLVAAFYGLRRGEVLGLKWDAIDFERGTLTIKRTVTSVNVGGKTQVI 255 Query: 264 ---PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMP 320 KT + +RT+ L+ E E +++ Y+ EY FVF+ Sbjct: 256 EQESAKTKSSMRTLPLVGRFREYFAEVKAAQELNKQVCGNCYNYEYD-------GFVFVD 308 Query: 321 RVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMG 380 + + Y L +++ A ++R G+++ + RH+ A LL G I +G Sbjct: 309 ELGERMKTDY-----LTSQFPAFIQRHGMKKMRFHDLRHSCASLLLANGVPLKQIQDWLG 363 Query: 381 HETAQMVYEIYG 392 H IY Sbjct: 364 HSDFSTTANIYA 375 >UniRef50_B7GTX3 Phage integrase family protein n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GTX3_BIFLI Length = 407 Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 23/257 (8%) Query: 168 LCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEF---NAL-------MESEKGQ 217 L ++R A+ I+ P + V+ ++R ++ +T AL E + G+ Sbjct: 145 LSQIMRKAFLDELINRNPCDAVEGVRRPKVSQQKRRETRITKEQALAFVHKIRQEPQDGR 204 Query: 218 SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLL 277 +W V +GLR GE AL WEDVDL+ + +R+ L + PKT RT+++ Sbjct: 205 IVAVW-LGVATGLRRGEALALVWEDVDLDNARLRIRKQLGKEKILKDPKTAKSRRTISID 263 Query: 278 QPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG 337 + +E LK Q+K H+ ++ +L P + ++ +Y L Sbjct: 264 RQTVEFLK-QWKTRQHNLFRAAGVEQQDDSPVCSNELCGFLDPDNFSRWRRKFYVKEGLA 322 Query: 338 ARWNAA----------VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMV 387 N VK+ G N + R A L+ G +P + +++GHE+ Sbjct: 323 HYTNETRYVDKRGVERVKQTGYVGPNFHALRRAQATLLVAGGVDPKTVQARLGHESLNTT 382 Query: 388 YEIYGMWIDDMNDEQIA 404 IY + + ND + A Sbjct: 383 LNIYAEEVGE-NDRKAA 398 >UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYN2_9DEIN Length = 387 Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 84/331 (25%), Positives = 132/331 (39%), Gaps = 54/331 (16%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T E C+ W E + T K L+ I I DI R + LH Sbjct: 62 TLKEFCERWLTSVEHRVKPTTHYGYKVALEKHAIPIL----------GDIAVQRLQPLHL 111 Query: 142 ETLYLD------NPRSNKKGRTVR--TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 LY D +P K+ +T+ TV L + L A + G + P + VK Q Sbjct: 112 THLYADLLKKRIHPNDPKRLKTLSPTTVRLVHRTLHAALEDAVRWGLLPWNPADRVKPPQ 171 Query: 194 RNRIKPDPLSKTE-FNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 R + + E + L E++ + L+ A+ +G+R GEL L W D+D ++G + V Sbjct: 172 APRYTGEVWTPEEVWRFLAEAQHSRLYALFFLALMTGMRRGELLGLKWADIDWQEGAIWV 231 Query: 253 RRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 R+NLT + PKT R V + LE L++ HRE + Sbjct: 232 RQNLTKAGSKRVVQSPKTYRSSRPVDVSSDVLEVLQQ----------------HRE--QQ 273 Query: 310 EKQKLH---------FVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 EK +L +VF V + S+L + A +KRA ++ + R T Sbjct: 274 EKDRLGIGDAWTDEGWVFTTSVGTPIEP-----SNLRREFLAIIKRAKVKEIRFHDLRDT 328 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIY 391 L AG +P ++ ++GH + + Y Sbjct: 329 HVSLLALAGVDPKVVSERVGHASVAFTQQTY 359 >UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERR7_OCEIH Length = 378 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 28/199 (14%) Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTV-- 274 L+ A+Y+G+R GEL L W D+++EK +++ RNL + F PKT R + Sbjct: 196 LFLLAIYTGMRKGELLGLKWSDINMEKECIHIHRNLCYIQNQGYFFTTPKTVRSTRVIPI 255 Query: 275 -TLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCN--GKQKPYY 331 +L+ L+ +KE+ + +E + V +C GK + Sbjct: 256 SSLISDQLQCIKEKQQC------------EKELAGPSYEDNDLV----ICTALGKVQDPR 299 Query: 332 SVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 +V+ + R +K A + + + RHT A L++ G + ++S+MGH + + +IY Sbjct: 300 NVTRVFER---CIKNANVPKIRFHDLRHTHASILISEGVDIVKVSSRMGHTSPKTTLDIY 356 Query: 392 GMWIDDMNDEQIAMLNARL 410 + + ++E + L Sbjct: 357 AHVVPNTDNEVATIFEKSL 375 >UniRef50_Q18AU2 Integrase n=52 Tax=Bacteria RepID=Q18AU2_CLOD6 Length = 397 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 36/262 (13%) Query: 150 RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD------PLS 203 R +KG +T++N+ L + A Q I PF+ Q N + D PLS Sbjct: 137 RMKEKGYGFKTINNHKRSLKAAFYTAIQDDCIRKNPFD----FQLNTVLEDDTEPKEPLS 192 Query: 204 KTE---FNALMESEKGQSQNLWKFAVY--SGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 T+ F + ++ +K + + + +GLR EL L D+DL+K ++NV L Sbjct: 193 PTQEAAFLSFVQHDKVYQKYYDEIIILLGTGLRISELCGLTEADIDLDKQLINVDHQLLK 252 Query: 259 LDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL 314 + G PKT +G R + + + LEA + + + + Y + Sbjct: 253 IADVGYYVETPKTKSGNRIIPMSEKVLEAFQRVLNKRKYTQPVILEGYTK---------- 302 Query: 315 HFVFMPRVCNGKQKPYYSVSS----LGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 F+F+ R NG K + S L ++N K A + P+ RHTF L AG Sbjct: 303 -FLFLNR--NGLPKVAVNYESMFRGLVRKYNKTQKVALPKVMTPHTLRHTFCTTLANAGM 359 Query: 371 NPAFIASQMGHETAQMVYEIYG 392 NP + MGH M Y Sbjct: 360 NPKALQYIMGHSNINMTLNYYA 381 >UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK9_ENTCA Length = 410 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 45/253 (17%) Query: 163 NYIALLCSLLRFAYQSGFISTKPFEGV------KKLQRNRIKPDPLSKTEFNALMESEKG 216 N I + S+ ++A I P EGV K++ + +K E ++ K Sbjct: 131 NLIGMTNSIFQYAKSLRLIRRNPMEGVIRPKRQKQIDEEKYTAPFYTKAEVLYFLQIAKK 190 Query: 217 QSQNLW---KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNA 269 L+ ++GLR GEL AL W+D+D ++G ++V++ LT ++ F PKT Sbjct: 191 YPDPLYPMFHILTFTGLRKGELLALRWKDIDFKRGTLSVKQTLTTVEDWKLAFQTPKTEK 250 Query: 270 GIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPR--VCNGKQ 327 +RT+++ L ++ KQK F+ R V NG Q Sbjct: 251 SLRTISIDNQTLSIFRQC---------------------ILKQKAFFLKTGRKPVENGAQ 289 Query: 328 --------KPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 KPYY + L +K ++ + RHT L +GA+ + ++ Sbjct: 290 LLFTTEENKPYY-LDFLNHNLTKILKENKLKHMTVHGFRHTHCSLLFESGASIKEVQVRL 348 Query: 380 GHETAQMVYEIYG 392 GH + +IY Sbjct: 349 GHTDVRTTMDIYA 361 >UniRef50_C4ZDW8 Integrase n=34 Tax=Bacteria RepID=C4ZDW8_EUBR3 Length = 432 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 105/398 (26%), Positives = 164/398 (41%), Gaps = 82/398 (20%) Query: 55 NSGEFEYLRRFPQSSTGAKMVTTRVIK-TFGELCDIWTKIKETELTTNTMKK--TKSQLK 111 N E E L R AK + T GEL D+W E EL T T+ + L+ Sbjct: 36 NKSETEKLLRQAMEDYEAKRFVAKAENITLGELLDLWA---EEELKTGTLSNGTVGNYLQ 92 Query: 112 TLRIIICESTPIS----------HIR-YSDILNYRNELLHGETLYLDNPRSNKKGRTVRT 160 T+ I + PIS H++ + D+L++ + G+ + KG ++ Sbjct: 93 TIGRI--KQHPISKRKLKTVTSVHLQEFMDLLSFGGTV--GDFI--------SKGYSIDY 140 Query: 161 VDNYIALLCSLLRFA-YQSGFISTKPFEGV-------------KKLQRNRIKPDPLSKTE 206 V ++ A+L RFA + FI+ P + V + +R K PLS Sbjct: 141 VRSFSAVLQQSFRFAVFPKQFITFNPMQYVVMRHKKEETDLFADETATDRDKVKPLSFEM 200 Query: 207 FNALMESEKGQSQNLW---KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL-----TI 258 + L+E +S + + A ++GLR GE+A L W+D++LE+ + VRR++ T Sbjct: 201 YRKLIEQLGKRSGDAILPVQIAYFTGLRLGEVAGLTWQDINLEEQYLTVRRSIRYNGATH 260 Query: 259 LDMFGPPKTNAGIRTV----TLLQPALEALKEQYKLTGHHRKSEITFYHREYGR--TEKQ 312 GP K IR V TL A KEQ+K +R Y R + R EK Sbjct: 261 KHEIGPTKWKK-IRVVDFGDTLADILRNAKKEQHK----NRFQYGELYQRNFYREVMEKN 315 Query: 313 KLHFVF-----MPRVCNGKQKPYY------SVSSLGARWNAAVKRAGIRRRNP------Y 355 ++H+ + V + ++ L A A + AG R+ P + Sbjct: 316 RVHYEYYHLGMTENVPEDYTEIFFVCLREDGCLELPATIETACRTAG--RKVPELEGFHF 373 Query: 356 HT-RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 HT RHT+ LL+ GA P + +GH +Y Sbjct: 374 HTLRHTYTTNLLSNGAQPKDVQELLGHSDVSTTMNVYA 411 >UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5L4_9ACTO Length = 404 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 79/326 (24%), Positives = 128/326 (39%), Gaps = 42/326 (12%) Query: 81 KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 +T W ++K E T++ ++ ++ + + PI +R H Sbjct: 43 ETVASFLARWLQVKAGEAKPTTVRSYRAHVERVIVPAIGHVPIEELRAE----------H 92 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL-QRNRIKP 199 E L +D GR TV A L S L + ++ + PF + N I+P Sbjct: 93 VEQLLVDA----ANGRGPVTVRRIHATLRSALSYGVKTRRL---PFNVASNVTPPNGIRP 145 Query: 200 D--PLSKTEFNALMES-EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL 256 + P S E A + E + L++ GLR GE L W D+DL +R+ Sbjct: 146 EVQPWSAAELAAFLRHVETDRLGPLFEVIAACGLRRGEALGLRWSDLDLANRTARIRQ-- 203 Query: 257 TILDM-----FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 TI+D+ F PKT + TV L + A++AL + R+ YH Sbjct: 204 TIVDVGGRLQFSTPKTRSSEATVPLTERAVQALLQVRLGQDLDRQGWGGAYH-------- 255 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 H + R +P Y+ R+ A K AG+R + RH A +L AG Sbjct: 256 --AHDLVFARENGAPLRPEYATR----RFVALTKAAGLRWVRLHDLRHGAASLMLAAGVP 309 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDD 397 A ++ + H + + + YG +D Sbjct: 310 MAIVSKVLRHSSIGITVDTYGHLSED 335 >UniRef50_C0C1S7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1S7_9CLOT Length = 384 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 32/192 (16%) Query: 206 EFNALME--SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR---RNLTILD 260 EF+ +E SE + ++ Y+G+R GE+ A +++D +L+KG V VR R + D Sbjct: 195 EFHIFLEYFSENMEMYLIFSLLYYTGVRIGEMLAFSYDDFNLQKGTVTVRKSYRRIRKTD 254 Query: 261 MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMP 320 PPKT R + L +E L++ + L E Sbjct: 255 YITPPKTPKSFRVIALPAFLIEQLQKYFSLKEGSGMDE---------------------- 292 Query: 321 RVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMG 380 R+ +G + Y +S N A + +++ + RH+ A L+ G +P IA ++G Sbjct: 293 RIFSGISR--YHISKF---MNEACENTKVKKIRIHDLRHSHASLLIELGVSPVLIAERLG 347 Query: 381 HETAQMVYEIYG 392 HE + IY Sbjct: 348 HENVETTLNIYS 359 >UniRef50_Q2IFG9 Phage integrase n=2 Tax=Cystobacterineae RepID=Q2IFG9_ANADE Length = 275 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 42/262 (16%) Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES 213 +G++ ++++N++A L LL A + I P K++ R K + +++ +F E+ Sbjct: 33 EGQSKKSINNHLAALRKLLNLAVEWEVIPRAP-----KVKGFRAKTEYITEEQFLTFDEA 87 Query: 214 EK--GQSQNLWKF----AVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKT 267 E+ + W+ A+ +GLR GEL AL WED+DL G + VRR L GPPK Sbjct: 88 ERLVHAAAPEWRTFIITALKTGLRVGELLALKWEDLDLVAGQLVVRRTL-WHKQEGPPKG 146 Query: 268 NAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQ 327 R V L A+ LK L G + E + R + +P C Sbjct: 147 GRN-RKVPLSDEAIAVLKAHRHLKGTYVFCEADGRRLTHSRVKD------VVPSTC---- 195 Query: 328 KPYYSVSSLGARWNAAVKRAGIRRRNPYH-TRHTFACWLLTAGANPAFIASQMGHETAQM 386 +RA + +R H RHTFA L+ G + + +GHE+ +M Sbjct: 196 -----------------RRAQLAKRLTTHGLRHTFASHLVMRGVSLMAVKELLGHESIEM 238 Query: 387 VYEIYGMWIDDMNDEQIAMLNA 408 Y D+ + + +L+A Sbjct: 239 PLR-YSHLSPDVKRDAVKLLDA 259 >UniRef50_A0PLK9 Prophage integrase n=4 Tax=Mycobacterium RepID=A0PLK9_MYCUA Length = 389 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 41/248 (16%) Query: 167 LLCSLLRFAYQSGFISTKPFEGVK-----KLQRNRIKPDPLSKTEFNALMESEKGQSQNL 221 LL S+L A+Q G I P GV + +R+R L+ E ++ + G ++ Sbjct: 144 LLRSILDVAHQDGRIHRNPALGVSAGRIPERERHRY----LTAQEVR-MLATACGDQGDV 198 Query: 222 WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQ 278 Y+GLR E L +D+DL + VRR ++ + GPPKT AGIRTV L Q Sbjct: 199 VTILAYTGLRWSEPVGLRVKDIDLTARRLYVRRAAPEVEGHIVIGPPKTRAGIRTVPLPQ 258 Query: 279 PALEALKEQYKLTGH-HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG 337 ++ K ++TG + +T + R+ + H Sbjct: 259 VVVDIFKG--RITGQAPDQPAVTSTNGAMLRSNNWRRH---------------------- 294 Query: 338 ARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG-MWID 396 WN A+K + + RHT+A +GA+ ++ MGH T + IY ++ D Sbjct: 295 THWNKALKSTDLAPLTIHDLRHTYASLARKSGADLRYVQKTMGHSTPTVTANIYSDLYAD 354 Query: 397 DMNDEQIA 404 ++ +Q+A Sbjct: 355 EL--DQVA 360 >UniRef50_B3XMH5 Integrase family protein n=2 Tax=Lactobacillus RepID=B3XMH5_LACRE Length = 370 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 47/321 (14%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T GEL D W I +T + +T KS+ +R + E +++I+ + NY ++L++ Sbjct: 68 TLGELIDEWLPIYKTMVKEHTYINNKSRATIIRNTLGEDVLVANIKPVLLSNYLDDLIY- 126 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV-----KKLQRNR 196 KK +V + L +LLR+A + +I T P + K ++ Sbjct: 127 -----------KKNYKNSSVQKFKGTLGNLLRYAKKHNYIKTNPIKEADVNYKKSSAADK 175 Query: 197 IKPDPLSKTEFNALMESEKGQSQNLWKFAVY---SGLRHGELAALAWEDVDLEKGIVNVR 253 I+ + E N +++ +S + +F + +GLR GE AAL D+ + G Sbjct: 176 IEEKYFDEEELNKILKYMYKRSPHYGRFCEFLYQTGLRFGEAAALIPNDIIEKDGKQVAV 235 Query: 254 RNLTILDMFG--PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 N T+++ PKT R VTL + ALE + ++ K E Sbjct: 236 INSTLVNKKKQPSPKTAKSNRDVTLPKRALEIIHDEEK--------------------EA 275 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT-RHTFACWLLTAGA 370 F+F +G+ + ++L A K I++ HT RHT L G Sbjct: 276 NGTQFIF----SSGRYGYPMNNTTLNDWLREAKKELNIQKITTVHTFRHTHISKLAELGV 331 Query: 371 NPAFIASQMGHETAQMVYEIY 391 I +++GH+ A +IY Sbjct: 332 PLYLIQNRVGHKDATTTKDIY 352 >UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TH34_LACRL Length = 383 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 82/362 (22%), Positives = 143/362 (39%), Gaps = 44/362 (12%) Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI 123 RF + + T R + TF + W + + +T ++T Q+K + + + PI Sbjct: 51 RFTLDADAGSLSTNRSM-TFKAVYLEWDAAYKNTVRESTYERTYIQIKKHVLPLFGNKPI 109 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 + I + + N+ + R ++ +LRFA + G+I+ Sbjct: 110 NKITTAQLQQAVNQW---------------SKQVTRNYRRWLTTASRILRFALRRGYINK 154 Query: 184 KPFEGV----KKLQRNRIKPDPLSKTE----FNALMESEKGQSQNLWKFAVYSGLRHGEL 235 P + V +K Q + + K E F+ + ++ Q L++ + GLR GE Sbjct: 155 NPADLVIIPKEKEQIGDVAANFWDKQELTRFFSYIDAKQEPQKTALFRILAFGGLRRGEC 214 Query: 236 AALAWEDVDLEKGIVNVRRNLTI----LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLT 291 AL W+D+ + V + L+ + PPKT RT+T+ + ALK Sbjct: 215 LALTWKDISFTDSTITVNKTLSQGMNGRQLVQPPKTRKSRRTITMDSKTMSALK------ 268 Query: 292 GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA-GIR 350 H R ++ Y G + VF N K K + + A W +++ I Sbjct: 269 -HWRLVQLQKYM-ALGFNANKPDQLVF----SNSKNK--HLLLHKPADWLKSIEDTHKIE 320 Query: 351 RRNPYHT-RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 R H RH+ A L +AGA + ++GH + IY + N E + L A Sbjct: 321 HRITIHGFRHSHASALFSAGATVKEVQERLGHSDVKTTLNIYTHVTKNQNKEAVNKLVAY 380 Query: 410 LS 411 L+ Sbjct: 381 LN 382 >UniRef50_C1B977 Putative integrase n=2 Tax=Nocardiaceae RepID=C1B977_RHOOB Length = 368 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 82/323 (25%), Positives = 138/323 (42%), Gaps = 45/323 (13%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T GE+ W + KE++L + + ++ + + +R SD+ +L Sbjct: 63 TMGEVGPAWLERKESDLKPSAYRSLETSWR-----VHVKPRWGTVRLSDV-----DLDAV 112 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 E D R+ KG TV V +L +L A + ++ P GV+ L R + KP Sbjct: 113 ERWIADLNRT--KGATV--VIRAYGVLAGILDSAVKGKRLARNPARGVENLPRKQRKPRV 168 Query: 202 -LSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 L+ E AL +S G+ + L Y GLR GE L +DL + V N ++ Sbjct: 169 YLTHDEVAALADS-AGEKRALVLVLAYCGLRWGEAIGLRVRHLDLLRKRATVVENAVQVN 227 Query: 261 M---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 M G PK++ R+V + +E L Q + G + ++ F R+ G K+ + F Sbjct: 228 MEMHVGTPKSHKS-RSVPIPGFVVEELARQCEGKG---RDDLVFPGRD-GDYLKRSVSFT 282 Query: 318 FMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 + AV+++G+ R P+ RHT A + AGAN + Sbjct: 283 GW--------------------FTKAVEKSGVPRLTPHDLRHTCASLSIAAGANVKSLQR 322 Query: 378 QMGHETAQMVYEIYG-MWIDDMN 399 +GH +A M + Y ++ DD++ Sbjct: 323 MLGHASAAMTLDTYSDLFEDDLD 345 >UniRef50_D1VST0 Phage integrase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VST0_9FIRM Length = 360 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/285 (23%), Positives = 121/285 (42%), Gaps = 53/285 (18%) Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNK--KGRTVRTVDNYIALLCSLLRFAYQSGF 180 IS I ++ ++N LL + NP++NK ++T++N L ++ +A + Sbjct: 99 ISGIGSIEVQRWQNLLLQAK-----NPKTNKPYAPTYLKTINNQ---LTAIFNYAVKFHN 150 Query: 181 ISTKPFEGVKKL-QRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAAL 238 + P V + ++N + + S EFN + + ++ +L + +SG R GEL AL Sbjct: 151 LKNNPVHKVGTIGEKNAPEKEIWSIEEFNEFINLVEDKTLHLGFNILYWSGCRIGELLAL 210 Query: 239 AWEDVDLEKGIVNVRRN---LTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 W D+D + I+N+ ++ L D+ PKT IR +T++ ++ ++ KL Sbjct: 211 TWNDIDFKNNIINIDKSYQRLNCKDVITEPKTKKSIRKITVVSDVIKEIESYKKL----- 265 Query: 296 KSEITFY-----HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 FY R + T+ + H + +C KR ++ Sbjct: 266 -----FYKPGDDDRIFNCTKHKFEHAII--NIC---------------------KRNNLK 297 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 R + RH+ A LL G N ++ ++GHE Y I Sbjct: 298 RIRIHDLRHSHASLLLNEGINIVALSKRLGHEKVSTTLNTYSHMI 342 >UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53_CLOPE Length = 400 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 76/314 (24%), Positives = 124/314 (39%), Gaps = 55/314 (17%) Query: 119 ESTPISHIRYSD-----ILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLR 173 ES+ I I+ D I Y N L+ E K T++T++ L S L Sbjct: 111 ESSSIGKIKLMDLRTHHIQAYYNSLVSEE---------RKSPSTIKTIN---KCLKSCLN 158 Query: 174 FAYQSGFISTKPFEGVKKLQRNRIKPDPL--------SKTEFNALMESEKGQSQNLWKFA 225 A + G+I TK + + L + P + +T M ++ G L+ A Sbjct: 159 QALKEGYI-TKNYCTLITLPKGSESPKEIINIFTLEEQQTFMKECMNNKNGM---LYILA 214 Query: 226 VYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI---LDMFG---------PPKTNAGIRT 273 + +GLR GE+ AL W D++ + +++ + + +D G PKT IRT Sbjct: 215 LGTGLRLGEILALKWTDINFKNNYIDINKAIKSTYKIDSKGNREFQIIEQQPKTKNSIRT 274 Query: 274 VTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSV 333 V L +E L++ K R S I Y + VF + N Y + Sbjct: 275 VPLNDNLIELLQQHRKKQMIDRDSNIEIYFDN---------NLVFSTPIGN-----YLNE 320 Query: 334 SSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGM 393 S++ + + + ++ + RHTFA L G P + + +GH IY Sbjct: 321 SNVRKTFKRILNKCNLKELRFHDLRHTFATRLFENGVPPKTVQTILGHSDISTTLNIYTH 380 Query: 394 WIDDMNDEQIAMLN 407 + D D+ I LN Sbjct: 381 VMKDTKDKAIDKLN 394 >UniRef50_B5GE73 TraSA:integrase fusion protein n=1 Tax=Streptomyces sp. SPB74 RepID=B5GE73_9ACTO Length = 436 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/259 (27%), Positives = 110/259 (42%), Gaps = 25/259 (9%) Query: 168 LCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVY 227 +L+ AYQ G I+ P +GV+ + + PL AL+ + + + L A Sbjct: 186 FTGVLKMAYQEGLITKHPCDGVEPPKPVYPEVQPLHPEAMKALIAASSKRYRLLVHLAAA 245 Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEA 283 SGLR GEL L E+ + G V V + L D G PKT+ RTV L + +L A Sbjct: 246 SGLRGGELFGL--EEKHVTPGAVVVEQQLIGPDKGVPYLGEPKTSQSYRTVPLPK-SLAA 302 Query: 284 LKEQYKLTGHHRKSEITFYHREYGRT---EKQKLHFVFMPRVCNGKQKPYYSVSSLGA-- 338 E YK R E+ R R +L F NG Q S + + Sbjct: 303 EVEAYKAAFPPR--EVWIEDRTNPRKPVWRSARLLFTSQ----NGGQLRRGSWARVWGRT 356 Query: 339 --RWNAAVKRAGIRRRNP-----YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 R N A++R+G R P + RH +A L++ GA P + ++GH + +Y Sbjct: 357 VNRANRALERSGSAVRVPSAATLHDARHFYASVLISKGATPKQVQRRLGHAKPSVTLNVY 416 Query: 392 GMWIDDMNDEQIAMLNARL 410 + D+ M+++ L Sbjct: 417 THLWETDEDQTADMIDSVL 435 >UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase family n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z6H5_DEHE1 Length = 386 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 33/266 (12%) Query: 140 HGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK--KLQRNRI 197 H + LY D RTV+ + +L L+ A ++G +S E V K+QR+ + Sbjct: 113 HLQHLYADKQSFGLSNRTVQIIH---VVLHKALKNAVKTGLLSRNIAEAVDAPKIQRHEM 169 Query: 198 KPDPLSKTEFNALMESEKGQSQ-NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL 256 + +++++ L+E K L+ ++++G+R E AL W D+DL V V R++ Sbjct: 170 QV--MNESDMQVLLEKAKETPYYALFYTSLFTGMRRAECLALRWSDIDLILCQVYVLRSM 227 Query: 257 TILD--------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 + F PKT+ R + L + L+E Y+ +SE+ G Sbjct: 228 QYVQDADLGKRITFKEPKTSKSRRQIALSPSNVIILREHYQ-----DQSELRKTLNLPGL 282 Query: 309 TEKQKL--HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 T+ + H+ P + N S+ W +R G+ + RHT A LL Sbjct: 283 TDSDLVFSHYDGSPLLPN----------SVTHAWIKLARRCGLNGIRLHDARHTHASLLL 332 Query: 367 TAGANPAFIASQMGHETAQMVYEIYG 392 G +P + ++GH + Q+ + Y Sbjct: 333 KQGVHPKIVQERLGHGSIQITLDTYS 358 >UniRef50_C9AMW3 Phage integrase n=8 Tax=Enterococcus faecium RepID=C9AMW3_ENTFC Length = 378 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 28/266 (10%) Query: 153 KKGRTVRTVDNYIALLCSLLRFA-YQSGFISTKPFEGVK---KLQRNRIKPD--PLSKTE 206 KKG + +T+ ++L + L A Y G I P VK +R K D +S + Sbjct: 122 KKGYSKKTMTITHSVLKNALNMAVYPWGLIKQNPMLYVKIPKYEERPTTKKDLKIISLED 181 Query: 207 FNALME-SEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---M 261 F+ ++E + +G + Y+G+R GE+ L W++VD G + V + + D + Sbjct: 182 FDHMLEITPEGHPFYIPLNIGFYTGMRVGEVCGLTWDNVDFSNGTITVEKQMVKNDGAWV 241 Query: 262 FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPR 321 +G PKT++ RT+ + Q L LK+ H+K ++ R + KL ++ Sbjct: 242 YGTPKTSSSNRTIFIGQTLLAILKK-------HKKQQLE------NRMKYGKL-YIDSNA 287 Query: 322 VCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT-RHTFACWLLTAGANPAFIASQMG 380 VC + + S + +WN + +H+ RHT A LL GA I+ ++G Sbjct: 288 VCTKEDGGLVTPSVV--KWNTRRISNALSLSFNFHSLRHTHATLLLENGAKMKEISERLG 345 Query: 381 HETAQMVYEIYGMWIDDMNDEQIAML 406 H + + Y D M ++ + ++ Sbjct: 346 HSRISITMDTYSHVTDKMRNQTVDIM 371 >UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium RepID=D0ADR3_ENTFC Length = 382 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 83/337 (24%), Positives = 135/337 (40%), Gaps = 45/337 (13%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 TF E+ D+W E + ++ KTK Q + + I+ I + NE + Sbjct: 68 TFQEVYDLWIVNYEQTVKESSFVKTKEQFANHILPAFGAYKINKITIDIAQKFANEKVKK 127 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG--VKKLQRNRIKP 199 LY R N + +C +A + G++ P + V K + + + Sbjct: 128 FVLY-------------REFINNASRICD---YAIKLGYLQDNPLKKITVPKRKVSVHEE 171 Query: 200 DPL---SKTEFNALMES-EKGQSQNLWKF---AVYSGLRHGELAALAWEDVDLEKGIVNV 252 D L SK E ++S EK + ++ F ++G+R GEL AL W+D+D + + Sbjct: 172 DTLNFFSKEELEIFLKSVEKKKDIRMYSFFRTLAFTGMRVGELLALTWKDIDFNDNYIKI 231 Query: 253 RRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 + L PKT R + + + LK K RK +T G Sbjct: 232 NKTLARGKNRRLYVEQPKTKNSKRDIPVDDETMNILK---KWRLEQRKWLLTL-----GI 283 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW-NAAVKRAGIRRRNPYHTRHTFACWLLT 367 K VF QK Y S +W +K+ ++R + RHT A LL Sbjct: 284 NTLSKNQLVF------SNQKNEYLQLSKPRKWLEVIIKQNNLKRITIHGLRHTHASLLLE 337 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIA 404 AGAN + ++GH + Q+ ++Y + I D E+ A Sbjct: 338 AGANIKDVQERLGHSSIQITMDLY-IHITDKRKEKTA 373 >UniRef50_C0Z4G0 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4G0_BREBN Length = 227 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 28/204 (13%) Query: 207 FNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL----DMF 262 F+AL ESE + + A+ +GLR GEL L W+ VDLE G ++V++++T + Sbjct: 26 FHAL-ESEPYHWKMMITLALTTGLRRGELVVLEWKYVDLEAGTIHVKQSITNFINGEPII 84 Query: 263 GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR---TEKQKLHFVFM 319 PKT IR ++L L LKE YKL +E+ + T ++L FVF Sbjct: 85 KEPKTKKSIRKISLSDGVLSKLKEYYKLCT-----------QEWDKLTGTRDKELFFVFF 133 Query: 320 PRVCNG--KQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 + + PY + +K+ ++ + RHT A L+ + + Sbjct: 134 NQYVRAFYPENPY-------LWFRGFLKKHDLKYIRFHDLRHTSATMLINKEIHAKIFSE 186 Query: 378 QMGHETAQMVYEIYGMWIDDMNDE 401 ++GH IYG + + E Sbjct: 187 RLGHANITTTMNIYGHVLSKADKE 210 >UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUQ4_RUBXD Length = 379 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 89/221 (40%), Gaps = 23/221 (10%) Query: 200 DPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEK---GIVNVRRN 255 D L+ E +++ +G + L+ AV +G+R GEL L W D+DL + + V R Sbjct: 173 DALTPEEARKFLDAARGDRFEALYVVAVMTGMRRGELLGLRWSDIDLGQNAPATLRVGRQ 232 Query: 256 LTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 L + F PK G RT+ L A+EALK R Y E Sbjct: 233 LQRMRDGSGLKFVAPKGGKG-RTIRLPSRAVEALKAHRARQAEERLKAGPLYRDE----- 286 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 VF V + S + +K+AG+ + RHT A LL+ G Sbjct: 287 ----GLVFASEVGTPLEPSNIDRRS----FKPLLKKAGLPDIRFHDLRHTCATVLLSQGV 338 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 NP F+ +GH ++ Y ++ M D+ + + L Sbjct: 339 NPKFVQELLGHADIKLTLGTYSHFLPSMGDQTANAMESALG 379 >UniRef50_C4ZBA5 Phage integrase family protein n=10 Tax=Firmicutes RepID=C4ZBA5_EUBR3 Length = 363 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 78/357 (21%), Positives = 147/357 (41%), Gaps = 55/357 (15%) Query: 59 FEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 E+ R F +S T A M G D++ + K EL T+K + ++ + Sbjct: 46 LEWEREFLKS-TSANMEMM-----LGAFVDVYFQDKAGELKERTIKNKQYMIEAHVLPYF 99 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRT-VRTVDNYIALLCSLLRFAYQ 177 + ++ I SDI+ ++NE+ R+ +T +R V N I L + Y Sbjct: 100 ANKRMNEITPSDIIQWQNEM-----------RAKGYSQTYLRMVQNQITALFTHACNIYN 148 Query: 178 SGFISTKPFEGVKKLQR-NRIKPDPLSKTEFNALMESEKGQSQNLWKFAV--YSGLRHGE 234 G P + VKK+ + + K + +K E+++ + +S+ F + ++G R GE Sbjct: 149 LG---NNPCKKVKKMGKADADKLNFWTKAEYDSFIRGIDKESRYFVIFEILFWTGCREGE 205 Query: 235 LAALAWEDVDLEKGIVNVRRNLTIL---DMFGPPKTNAGIRTVTLLQPALEALKEQYKLT 291 + AL D+D E +++ + D+ PKT IR + + E LK++ + Sbjct: 206 MLALTKSDIDFENNQISITKTYYRTERRDIITTPKTEQSIRVIDIP----EFLKKEIE-- 259 Query: 292 GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR 351 + +R YG + ++L P V Q + ++G+++ Sbjct: 260 --------AYVNRCYGLPDNERL----FPIVAEAVQH----------KLKRECAKSGVKQ 297 Query: 352 RNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 + RH+ +L+ G P I ++GH ++ YG + + MLNA Sbjct: 298 IRVHDLRHSHVAYLINQGVQPLIIKERLGHRDIKITLNTYGHLYPNQQKKVADMLNA 354 >UniRef50_C8WP09 Integrase family protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WP09_EGGLE Length = 438 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 33/217 (15%) Query: 189 VKKLQRNRIKPDPLSKTEFNALMESE---KGQSQNLWKFAVYSGLRHGELAALAWEDVDL 245 ++ + +R P LS E NAL+ + +G + + A+++GLR GE+ AL W +VDL Sbjct: 172 IRAPKHDRPLPRALSAEEKNALLAALPCIRGPLDAIVRLALFAGLRCGEICALRWANVDL 231 Query: 246 EKGIVNVRRNLTIL----DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 + V + + L PK+ AG+R + + +E L+ R++E Sbjct: 232 NRRTVRITSAIGTLPSSNGYLKGPKSPAGVRALPIADGLMEGLE--------RRRAEQEA 283 Query: 302 YHREYGRTEKQKLHFV------FM-PRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 R+ G + V FM PR N + + +G + G+ R Sbjct: 284 RCRDAGVPFTDDIFVVGDIDGAFMVPRYANQLFRTFVRTFGIGG------GKCGLHR--- 334 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 RHTFA L+ +G NP +++ +GH IY Sbjct: 335 --LRHTFATELIMSGVNPKTVSNWLGHTDPSFTLRIY 369 >UniRef50_A7VVX9 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VVX9_9CLOT Length = 419 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 78/342 (22%), Positives = 132/342 (38%), Gaps = 75/342 (21%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 TF E + W KIK+ +++ K + +L+ + I + PIS I+ +++ N +L Sbjct: 90 TFKEWGNHWLKIKKAIVSSAHYKTCEQKLRIINCYIGD-MPISQIKTANVQNIIFDLSSL 148 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 R K RT+ Y ++ + + A ++ I P VK + N++K Sbjct: 149 N-------RWTGKPTAKRTLVEYRSVCRQVFQLAIENRIIDYNPASSVK-IVSNQLKK-- 198 Query: 202 LSKTEFNALMESEKG-------QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 E AL E+G ++Q +++GLR GE+ L W D+D E G + V + Sbjct: 199 ----ERRALSVEEQGWIINTPHRAQKAAMIMMFAGLRRGEVIPLTWNDIDFEAGTIRVNK 254 Query: 255 NL----TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 ++ T ++ KT +G R V + Q ++ LK Q K T Sbjct: 255 SVFKEGTRFNIKSGAKTESGNRVVNIPQILIDFLKLQPKDT------------------- 295 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR-------------------- 350 VC + + +S W++ +K I+ Sbjct: 296 ---------ILVCPDTKDVMMTETSWRRMWDSYIKDLNIKYGDLNGKRSKYDPKGVPITI 346 Query: 351 -RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 R P+ RHTF L +G + QMGH + IY Sbjct: 347 PRITPHWLRHTFCTLLYLSGTDVLTAKEQMGHSDIKTTLGIY 388 >UniRef50_A4U1Z2 Phage integrase n=4 Tax=Alphaproteobacteria RepID=A4U1Z2_9PROT Length = 368 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 32/262 (12%) Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI--KPDPLSKTEFNALME 212 GR+ V + +L +L A +G + +GVK L+ +RI K SK + L++ Sbjct: 131 GRSEAMVRKVLGVLRLILSHAMDNGQVPGNAAQGVKVLRASRIDQKVAVPSKKDVKTLID 190 Query: 213 SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIR 272 + G+ + L + GLR E L W+DVD G +++R+ G PK+ AG R Sbjct: 191 NAVGRLRPLLIVSALCGLRASEARGLRWQDVDFADGYLHIRQRADFYCEIGEPKSAAGHR 250 Query: 273 TVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ---KLHFVFMPRVCNGKQKP 329 +V L AL+E +KL + ++ F + ++ + HF KP Sbjct: 251 SVPAGPMVLNALRE-WKLACPKGEMDLVFPANDGSVSDHNNTMRRHF-----------KP 298 Query: 330 YYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYE 389 + RW + RH + G + + GH + QM E Sbjct: 299 LCQRHGIQTRW--------------HDLRHFAVSLWIEQGFGIKEVMTFAGHSSVQMTME 344 Query: 390 IYG-MWIDDMNDEQIAMLNARL 410 YG M+ + + +A + ARL Sbjct: 345 RYGHMFPSPDHQKAMAQVEARL 366 >UniRef50_UPI0001C4265E tyrosine recombinase xerC-like protein n=2 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4265E Length = 401 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 40/234 (17%) Query: 194 RNRIKPDPLSKTEFNALM----ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 + I + L E N L+ E E + + Y+GLR GE L W++++ K Sbjct: 183 KGNINENFLEAHELNKLLATAKEHENITNYTFFLLLAYTGLRRGEACGLQWDNINFTKKT 242 Query: 250 VNVRRNLTILDMFG--PPKTNAGIRTVTLLQPALEAL-------KEQYKLTGHHRKSEIT 300 + V R D G PKT RT+ + + ++ L KE + GHH K++ Sbjct: 243 LTVERT---RDNKGVRTPKTQNSYRTILIDEVLVQQLIVYKNWCKETRQKFGHHLKND-- 297 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 F+F+ + SL VK+AGI+ P+ RHT Sbjct: 298 --------------DFIFLSYQTGEPITDNSVIYSL----RRVVKKAGIKPITPHGLRHT 339 Query: 361 FACWLLTA---GANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 A LL+ A+ +A ++G+ T QM+ +IYG D+ +E + + + LS Sbjct: 340 HATLLLSQSKRAASVKVVAERLGN-TPQMILDIYGHTFLDLEEETVQLFSESLS 392 >UniRef50_C2EIM6 Phage integrase n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EIM6_9LACO Length = 370 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 78/334 (23%), Positives = 132/334 (39%), Gaps = 56/334 (16%) Query: 80 IKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELL 139 ++TFG+L D W + + + ++ K L ++ + +I D N N+LL Sbjct: 69 LRTFGDLYDFWFEQYKNTVRGSSYYVIKKGLDKNVYPYLKNKQLKNITLIDCQNLFNKLL 128 Query: 140 HGETLYLDNPRSNKKGRTVRTVDNYIALLC---SLLRFAYQSGFISTKPFEGVKKLQRNR 196 NP NY+ L +L++A I P V K + + Sbjct: 129 KT------NP------------GNYVILSIYTKKILQYAVTLKLIPENPMNNVIKPREKK 170 Query: 197 I--KPDPLSKTE---FNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVN 251 + SK E F A + EK L++ YSG+R GEL AL D+D ++ Sbjct: 171 TYGSNNYYSKEELKTFLAYSKKEKFHVYVLFRLLAYSGMRIGELLALKVADIDFNTSQIS 230 Query: 252 VRRNLTILDM-----FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 + + ++ D PKT G R +++ + + K Sbjct: 231 ITKTISS-DADSRFELHKPKTTTGNRIISVDPDTINLVSTLIK----------------- 272 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 +K+K F+F C+ KPY S ++ N +K+A +R+ + + RHT+ L Sbjct: 273 ---DKKKDDFIFRFYGCS---KPY-SPRTVALWKNKIIKKANLRKISLHGFRHTYTSLLF 325 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMND 400 +G N I Q+GH +M +Y + ND Sbjct: 326 ESGVNIKKIQKQLGHSKVEMTLNVYTHLSRNNND 359 >UniRef50_D0DGR8 Integrase n=1 Tax=Lactobacillus crispatus MV-3A-US RepID=D0DGR8_9LACO Length = 388 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 35/188 (18%) Query: 225 AVYSGLRHGELAALAWEDVDLEKGIVNVRR----NLTILDMFGPPKTNAGIRTVTLLQPA 280 +++G R GEL AL W D+D + I+++ + NL IL GP KT + +R + + Sbjct: 206 GLFTGARLGELTALKWTDIDFKNKIIDINKTWNPNLKIL---GPTKTESSVRKIKVNSFL 262 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW 340 L+ LK Q K+ SE F +PR P S S++ Sbjct: 263 LDKLK-QLKINN----SEFIFA----------------IPRTG---LPP--SSSAVNQFL 296 Query: 341 NAAVKRAGIRRRN-PYHT-RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 A+K G+ + + +H+ RHT +L++ G + A I+ ++GH + IY +D+ Sbjct: 297 RKAIKEIGLNKPDFHFHSLRHTHVSYLISQGIDIAAISKRLGHANIAITLSIYAHLLDEY 356 Query: 399 NDEQIAML 406 D+Q A + Sbjct: 357 KDQQDAKI 364 >UniRef50_C0KTD3 Integrase (Fragment) n=7 Tax=Bacteria RepID=C0KTD3_9CLOT Length = 263 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 41/199 (20%) Query: 203 SKTEFNALMESEKGQSQNLWKFAV--YSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL- 259 +K EF+A +ES K ++ + F Y+G+R GEL AL D+DLEK + V ++ L Sbjct: 78 TKDEFHAFIESMKDRTASYTIFMTMYYTGIREGELLALTPADIDLEKKTLTVNKSYQRLN 137 Query: 260 --DMFGPPKTNAGIRTVTLLQPALEALKEQ----YKLTGHHRKSEITFYHREYGRTEKQK 313 D+ PKT RT+ + LKE Y+L R Sbjct: 138 GEDVVTSPKTPKSNRTIPIPDGLCACLKEYMSHCYELQPDDR------------------ 179 Query: 314 LHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPA 373 P Y+ S L K +G++R + RH+ A L+ G +P Sbjct: 180 ----MFP----------YTKSFLYHEMEHGCKVSGVKRIRVHDIRHSHASLLVEMGFSPL 225 Query: 374 FIASQMGHETAQMVYEIYG 392 IA ++GHE Q + Y Sbjct: 226 LIAERLGHEKVQTTMDTYS 244 >UniRef50_Q65KE0 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KE0_BACLD Length = 381 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 76/345 (22%), Positives = 140/345 (40%), Gaps = 49/345 (14%) Query: 93 IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLD----- 147 I E + N+ KS T ES + +R S I+NYR +L + YL Sbjct: 50 IIEVDKEKNSHNPNKSVFSTFAEKWFESKKV-RLRSSTIVNYREQLDYNILPYLGTFKIK 108 Query: 148 -----------NPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 N N++ T+ ++ +L+ A + G + V NR Sbjct: 109 DITEEVLQHYINRLHNERKLAPATIRTAFGVVAEVLKKASRKGAFDLAILDDVNLPPENR 168 Query: 197 IKPDPLSKTEFNALMESEKGQSQNLWKF------AVYSGLRHGELAALAWEDVDLEKGIV 250 I +++ A +++ + + +L ++ +V +G+R GE+ L W D+D EKG + Sbjct: 169 IS-KVWNESNVQAFLDA-RNRIVSLTRYFIGMVLSVITGMRMGEVLGLRWSDIDFEKGYL 226 Query: 251 NVRRNLTILDMFG------PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 +R+ L +D G KT AG RTV L + +E L E H+ Sbjct: 227 TIRQTLAKIDDEGNYGLVPEVKTAAGFRTVHLPKFFIEYLIE----------------HK 270 Query: 305 EYGRTEKQKL--HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 + + EK+ L ++ V K + ++ + + + + + P + RHT A Sbjct: 271 KMVQREKEILGEDYIDYDLVVCTKHGKWVHPNNYRRAFTRLIAQLELPKIPPKNLRHTHA 330 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 +L++ G +P + ++GH + Y + M E + L+ Sbjct: 331 TYLISIGISPKIVQERLGHAHIKTTLGTYSHVLPSMQAELVGKLD 375 >UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integrase n=3 Tax=Lactobacillus RepID=Q38Y39_LACSS Length = 385 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 20/249 (8%) Query: 169 CSLLRFAYQSGFISTKPFEGV---KKLQR----NRIKPDPLSKTEFNALMESEKGQSQNL 221 ++ ++A G+I P V KKL + N D L KT FN + + L Sbjct: 140 SAIFKYAILQGYIKDNPCTRVTMPKKLDKEDTLNFWDKDQL-KTFFNGIDPVNDLEKYTL 198 Query: 222 WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLL 277 ++ ++G+R GE +L W+D++++K +++ + LT D + P KT G R ++L Sbjct: 199 FRVLAFTGIRRGECLSLTWDDLNVQKATLDINKTLTHGDKGRLLIQPTKTKKGTRVISLD 258 Query: 278 QPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG 337 + L LK+ H + + Y + +L F P + +L Sbjct: 259 ESTLLYLKK------WHLEQRRMYLMLGYNINKSNQLIFATSKNTFKSLNTPSKWLRALI 312 Query: 338 ARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 N + A + + RH+ A L +AGA+ + ++GHE AQ IY + Sbjct: 313 DDANKS--GANLPSITVHGFRHSHASALFSAGASIKEVQERLGHEDAQTTLNIYTHVTEK 370 Query: 398 MNDEQIAML 406 E + L Sbjct: 371 QGQEAVQKL 379 >UniRef50_C2RY84 Prophage LambdaBa04, site-specific recombinase, phage integrase n=4 Tax=Bacillus cereus group RepID=C2RY84_BACCE Length = 378 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 38/264 (14%) Query: 164 YIALLCSLLRFAYQSG----FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQ 219 YI + +L+ A + + PFE V+ + ++ + S E + K + Sbjct: 130 YIEYIFIVLKGALEDAVKWELLYKNPFEHVEIPRPRKVVNNTWSIEETKTFLTYAKFDNP 189 Query: 220 ---NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM---FGPPKTNAGIRT 273 +L+ A+ +G+R GEL L W++VDL +G V+V L ++ F PKT+ R Sbjct: 190 IYYHLFLLALNTGMRRGELLGLKWKNVDLVEGKVSVTETLIYDELGFRFTEPKTSGSKRL 249 Query: 274 VTLLQPALEALKE------QYKLT-GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGK 326 +++ Q + LK ++KL G + + RE GR Sbjct: 250 ISIDQSLCKELKSYKAKQNEFKLAIGKAYEDNDLVFSREDGR------------------ 291 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQM 386 P Y +L + +K A + + + RHT A LL G NP ++ ++GH + + Sbjct: 292 --PIYP-RTLTTVFERFIKTAQVPKIRFHDLRHTHATLLLKLGINPKIVSERLGHNSIKT 348 Query: 387 VYEIYGMWIDDMNDEQIAMLNARL 410 + Y DM + L+ L Sbjct: 349 TLDTYSHVTLDMQESATIALSEAL 372 >UniRef50_A6QA80 Site-specific recombinase, phage integrase family n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA80_SULNB Length = 366 Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 24/240 (10%) Query: 159 RTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD--PLSKTEFNALMESEKG 216 +T+ +Y+ + + A + +S PF +K ++ + + P + E ++E Sbjct: 118 KTLKSYVVDCKGIFQVALEEEILSKNPFVHIKVVKNGKESEEVIPFTSQEVQTILEHAPR 177 Query: 217 QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTL 276 +N Y+G+R GE+ L D+ ++ + V+R+++ + PKT IR V L Sbjct: 178 PLKNFLAIGFYTGMRSGEILGLQLSDIYDKR--ITVKRSIS-RGVISTPKTVKSIREVPL 234 Query: 277 LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL 336 L EQ + RK + + GR ++ GK KPY Sbjct: 235 FDVLRPYLNEQVQTA---RKLKSVYLFSNEGR-------HLYSVDTIRGK-KPY------ 277 Query: 337 GARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF-IASQMGHETAQMVYEIYGMWI 395 W + I R Y+TRHTF +L +G IA +GH ++M+ E Y +I Sbjct: 278 -GVWAKLLSDLEIPYRKIYNTRHTFITAMLKSGELSVLEIAQIVGHTNSKMILENYARFI 336 >UniRef50_B2TP23 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=3 Tax=Clostridiales RepID=B2TP23_CLOBB Length = 398 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 33/268 (12%) Query: 166 ALLCSLLRFAYQS-GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEK--------- 215 +L L +A + G+I P V+ + + P K E + E + Sbjct: 136 GILSGSLNYAVEPLGYIKFSPMAAVRLPLKRAVPNTPTRKKEKYIVSEEQMEGIFERFPF 195 Query: 216 GQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGI 271 G S L + A GLR GE A+ W+DVDL+ +++ + + + F PPK ++ Sbjct: 196 GHSSYLPLQLAYRCGLRLGEAFAITWDDVDLKNQKLDINKQVQYKNKQWYFTPPKYDS-Y 254 Query: 272 RTVTLLQPALEALKEQYKLTGHHRKSEITFYH----------REYGRTEKQKLHFVFMPR 321 R + L ++ LK K RK +I + ++ T+ ++H + + Sbjct: 255 RIIDLDNTIIDILK---KYKQQQRKDKIYYGELYTELKINDKKQIKETDGTEIHLINIRE 311 Query: 322 VCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGH 381 NG Y + ++ + GI+ + + RHT A LL++GAN + ++GH Sbjct: 312 --NG---TYIQPRVMQHCFHIIHHKLGIKELDYHSLRHTHATMLLSSGANIKAVQERLGH 366 Query: 382 ETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + M ++Y D+M I +LN + Sbjct: 367 KKLDMTLDVYTHVTDEMRRNTIDILNKK 394 >UniRef50_Q0FT82 Phage integrase n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FT82_9RHOB Length = 316 Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 17/204 (8%) Query: 203 SKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMF 262 +K E ++E+ + ++ A+++G+R EL L W++VDL++G+V+VR+ + Sbjct: 120 TKDEIRLIVENAPASHRAMFIAAIFTGMRISELRGLTWDNVDLDRGLVHVRQRADEHCVL 179 Query: 263 GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRV 322 G PK+ AG R + + P + Q++ T + F + G + Q ++ Sbjct: 180 GKPKSRAGHRDIP-MTPLVRDTLAQWQRTVPVTVQNLVFPN---GAGKIQNYSNIY---- 231 Query: 323 CNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHE 382 N KP N V AG + + RH A + G NP I + +GH Sbjct: 232 -NRVFKPMLVA-------NGIVDAAGEPKFGLHALRHAAASLFIEQGWNPKKIQTLLGHA 283 Query: 383 TAQMVYEIYGMWIDDMNDEQIAML 406 + M ++YG ++ +E ++M Sbjct: 284 SITMTMDVYGHLFENA-EEDVSMF 306 >UniRef50_C7GI02 Site-specific recombinase, phage integrase family n=12 Tax=Bacteria RepID=C7GI02_9FIRM Length = 431 Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 98/416 (23%), Positives = 174/416 (41%), Gaps = 64/416 (15%) Query: 43 AGNL--RALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTT 100 +GNL + + E S + LR+ K V T G+L D+W E EL T Sbjct: 23 SGNLVQKECVGTESKSETEKLLRQAMDDYEKKKFVAKADNLTVGQLLDVWA---EEELKT 79 Query: 101 NTMKK--TKSQLKTLRIIICESTPISHIRYSDI----LNYRNELLHGETLYLDNPRSNKK 154 T+ ++ L T+R I + P++ + ++ L +LL ++ D +K Sbjct: 80 GTLSNGTVENYLGTIRNI--KKHPLAERKLKNVTSEHLQSFFDLLSFGGVHPDG--KERK 135 Query: 155 GRTVRTVDNYIALLCSLLRFA-YQSGFISTKPFEGVK-KLQRNRIK----------PDPL 202 G + + ++ A++ RFA + +I+ P + +K + Q + + P+ Sbjct: 136 GYSKDYIHSFSAVMQQSFRFAVFPKQYITFNPMQYIKLRYQTDEVDLFSDEDMDGNVQPI 195 Query: 203 SKTEFNALME--SEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 S+ ++ L+ +K + L + A Y+GLR GE LAW+DV+LE+ + +RR++ Sbjct: 196 SREDYERLLAYLQKKNPAAILPIQIAYYAGLRIGEACGLAWQDVNLEEQCLTIRRSIRYD 255 Query: 260 D-----MFGPPKTNAGIRTV----TLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 + GP K +R V TL++ A KEQ K +R YH Y + Sbjct: 256 GSKRKYIIGPTKRKK-VRVVDFGDTLVEIFRNARKEQLK----NRMQYEELYHTNYYKEV 310 Query: 311 KQKLHFVFMPRVCNGKQK----PYYSVSSLGARWNAA-------------VKRA--GIRR 351 K+K + V+ C + + Y +S + R + V +A G Sbjct: 311 KEK-NRVYYEYYCLDRTQEVPADYKEISFVCLRPDGCLELPTTLGTVCRKVAKALEGFEG 369 Query: 352 RNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 + + RHT+ LL GA P + +GH +Y D + + +L+ Sbjct: 370 FHFHQLRHTYTSNLLANGAAPKDVQELLGHSDVSTTMNVYAHSTRDAKRKSVRLLD 425 >UniRef50_Q03L48 Integrase n=30 Tax=Streptococcus RepID=Q03L48_STRTD Length = 388 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%) Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPA 280 L+KF + +G R E AL+W D+DL+ +V++ + L PK+ +G R + + + Sbjct: 213 LYKFLLATGCRINEALALSWSDIDLDNSVVHITKTLNYEMKLNSPKSKSGYRDIDIDKQT 272 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW 340 + +K H++++ + + GRTE VF + Y + +L +R Sbjct: 273 VTMMKRY-----QHKQTQEAW---KLGRTET----VVFSDFI-----HEYPNSRTLQSRL 315 Query: 341 NAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 KRAG+ + RHT A LL +G + ++GH M +IY Sbjct: 316 GTHFKRAGVTNIGFHGFRHTHASLLLNSGIPYKELQHRLGHSKLSMTMDIYS 367 >UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, phage integrase n=10 Tax=Bacillus cereus group RepID=C2Z776_BACCE Length = 379 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 80/332 (24%), Positives = 133/332 (40%), Gaps = 49/332 (14%) Query: 86 LCDIWTKIK---ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 + DIW K+K + EL + +K S +K + I I+ I +Y EL Sbjct: 65 VLDIWGKLKPIRKAELKITSYEKDMSLVKLYILPTFGYKKIKSIKPVIIQSYYAEL---- 120 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 +KG + T+ N + + A + + VKK + + + Sbjct: 121 ---------KEKGLSNGTISNIHRCFRCIFKHAVEWEILHDNIMNKVKKPREEQGEMKTW 171 Query: 203 SKTEFNALMESEKGQSQNLWKF---AVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 S E N + K +++ + F A+Y+G+R GEL AL W+D+D + + V ++L Sbjct: 172 SSKECNRFLHYLKEKNKKYYIFFLLAIYTGMRRGELLALTWKDIDFDNKRILVNKSLVKT 231 Query: 260 D--MF-GPPKTNAGIR-------TVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 + +F KT + R VT LQ K+++ G H E + G T Sbjct: 232 EEGLFKAATKTKSSNRSISISSFVVTELQSYYAYKKKEFFRWGIHLNEEAYIF---AGNT 288 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 LH R K +Y K+AG+ R + RHT A +L AG Sbjct: 289 IHSPLHIDAPHRFL----KDHY-------------KKAGVPRIRIHDLRHTHATLMLQAG 331 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDE 401 +P + ++GH + QM + Y +M + Sbjct: 332 EHPKIVQDRLGHSSIQMTLDKYSHITQNMQQQ 363 >UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF85_9FIRM Length = 398 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 13/253 (5%) Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP--LSKTEFNALME 212 G T+R YI++ ++ + A + I+ P GV+ + R D L+ E +E Sbjct: 129 GSTIR--QTYISM-GTMFKSAVMNDIIAKHPMNGVRYTKPVRAVDDIKYLTVEEQEKFLE 185 Query: 213 S-EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM-----FGPPK 266 + E+ + + + +GLR EL L W+ +D +K + V ++L GPPK Sbjct: 186 AAERSHNYRQYALLLETGLRTAELIGLTWDAIDWKKRTLTVNKSLEYRHSRRYWRAGPPK 245 Query: 267 TNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY--GRTEKQKLHFVFMPRVCN 324 T RT+ L + A LK Y ++SE+ EY RT ++K + N Sbjct: 246 TKKSYRTIPLTERAYTILKSCYDEKDTRKESEMLSQILEYTDSRTGEKKCLVMRDLVFIN 305 Query: 325 GKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETA 384 + SS AGI+R + RHT+A + G P + +GH + Sbjct: 306 WRTGEPAKNSSYDTHLYKLCDEAGIKRFCMHALRHTYATRAIERGVQPKVLQQLLGHASI 365 Query: 385 QMVYEIYGMWIDD 397 + + Y D+ Sbjct: 366 KTTMDRYVHVTDE 378 >UniRef50_D1BL69 Integrase family protein n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BL69_VEIPT Length = 403 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/347 (21%), Positives = 134/347 (38%), Gaps = 46/347 (13%) Query: 85 ELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDIL----NYRNELL 139 ++C+ W + +K+ + T +K S L+ + + I+ I + N+ N L Sbjct: 75 DICNYWLQDVKKVSVKPKTFQKYDSTLRLYILPLLGEIKIASITPQQVQTVLNNWSNGTL 134 Query: 140 HGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP 199 G+ ++ + T+R Y L L +A G + P + K + + Sbjct: 135 KGKKGHIIS------SSTIRCTRRY---LSELFEYAVNIGLLLKNPIKLTKAPRLITTEI 185 Query: 200 DPLSKTEFNALMESEKGQSQN---------------LWKFAVYSGLRHGELAALAWEDVD 244 LS E + L + K Q N K A+ +G+R GE+ L W+ VD Sbjct: 186 HTLSLDEIHQLTSTMKQQVSNNISSPYRINYYSSYIATKIALGTGMRLGEVFGLCWDCVD 245 Query: 245 LEKGIVNVRRNL---TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 L G ++VRR + T +F KT R + + Q L + ++ K Sbjct: 246 LIHGHISVRRTIQTGTKGQIFQDTKTKTSRRCIPISQELQSELTTYKEFQSNYAKELGDK 305 Query: 302 YHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAV-KRAGIRRRNPYHTRHT 360 + YG V +G S S+ +R+ + K+ + + RHT Sbjct: 306 WTDSYGV-------------VISGTFGKILSTSNFKSRYFIPILKQLNLDHITFHDLRHT 352 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 A LL+ NP + ++GH T + + Y + D+ E + L+ Sbjct: 353 HATLLLSQKINPKIVQERLGHSTITLTLDTYSHLVPDIQKEAVKALD 399 >UniRef50_A7B6B9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7B6B9_RUMGN Length = 387 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 44/270 (16%) Query: 156 RTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEK 215 +T+R V N +L ++ ++A + ++ P GV+ + + L+ E ++E K Sbjct: 117 KTIRDVYN---ILNAMFKYAVHNRILTFNPCAGVEVPKTKTKQIRVLTVKEQREVLEHAK 173 Query: 216 GQ-SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---------MFGPP 265 + +NL + A+ +G+R GEL L W+DVD K ++V + L + + P Sbjct: 174 ERIHENLIQVALGTGMRGGELLGLTWDDVDFRKREISVNKTLVYIKDKETKKYVFKYQTP 233 Query: 266 KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL----HFVFMPR 321 KT IRT+ + +ALK Q+ I + +E Q L + VF+ + Sbjct: 234 KTKNSIRTIPMQDSVYKALKRQW----------IQLKEMQLSASEWQPLEGFENLVFVGK 283 Query: 322 VCNGKQKPYYSVSSLGARW-----NAAVKRAGIRRRN---------PYHTRHTFACWLLT 367 NGK ++ + W N K+ + + P+ RHTFA Sbjct: 284 --NGKPITEHTF-QVTLDWIEKSINKERKKQAEKNKTVFIPIPHFYPHALRHTFATRCFE 340 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDD 397 AG + + +GH + + ++Y DD Sbjct: 341 AGIDAKVVQGFLGHYSIAITLDLYTHVTDD 370 >UniRef50_B5CPJ9 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CPJ9_9FIRM Length = 377 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/343 (23%), Positives = 132/343 (38%), Gaps = 59/343 (17%) Query: 81 KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 K F E C W KI E+ L +T+ K L+ + + I ++ +LL+ Sbjct: 67 KRFSEYCVQWIKINESRLKKSTLAKYHFMLENHIKPQLGDYSFTDLNSDIIADFSKDLLY 126 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD 200 + L +TVR + ++ + S ++ S S +L+R ++ Sbjct: 127 QKKL---------SPKTVRDILTFVHKIISYIQAETNSNLSSITI--SYPRLERKELRV- 174 Query: 201 PLSKTEFNALMESEKGQSQNLWKFAV----YSGLRHGELAALAWEDVDLEKGIVNVRRNL 256 LS E L++ Q +++KF+V ++GLR GE+ AL W+D+ +E G++ VR + Sbjct: 175 -LSAEEQQNLIQY-LVQDFDIYKFSVLIALFTGLRIGEVCALQWKDISVESGLLTVRHTV 232 Query: 257 -------------TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 T+L + G PKT + RT+ P L++ +KL H Sbjct: 233 QRIKNPDSDSAKKTLLQL-GTPKTFSSARTL----PVTNGLQKLFKLFQHDDPEAFILTG 287 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 H PR K K Y K GI+ + + RHTFA Sbjct: 288 N----------HQFIDPRNLQRKLKKY-------------TKDLGIQDVHFHTLRHTFAT 324 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 + G + ++ +GH Y D E I L Sbjct: 325 RCIEFGCDIKILSEMLGHSNISTTLNRYVHPSMDFKRENILKL 367 >UniRef50_UPI0001C3748B integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3748B Length = 404 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 110/274 (40%), Gaps = 51/274 (18%) Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVK--------KLQRNRIKPDPLSKTEFNALM 211 T+ +L L +A +I+ P GVK K +R + D + + A + Sbjct: 154 TIHKAYVILNECLNYAVFKDYITKNPCMGVKLPSKDNFEKKERRFLNDDEIQTFKAQACV 213 Query: 212 ESE-----KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL-DMFGPP 265 K N+ +Y+GLR GEL+AL W+D+D + I++V + + ++ D P Sbjct: 214 SQSNFNIPKYVYGNIICLILYTGLRVGELSALKWKDIDFQHKILSVNKAVVVVYDYSAKP 273 Query: 266 K---------TNAG-IRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLH 315 K T +G R + L Q A++ L+ Q L G I Sbjct: 274 KKRTLTVQDTTKSGKPRVIPLNQKAIQILETQRSLFGGDDDCFIV--------------- 318 Query: 316 FVFMPRVCNG-KQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT-RHTFACWLLTAGANPA 373 NG KQ P +V + ++ + A I + HT RHTFA + G + Sbjct: 319 --------NGTKQIPDKTV--VANSYSKIARAAKIPDPSGIHTLRHTFASSAIRKGVDIK 368 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 ++ +GH + Y Y ID+ + +LN Sbjct: 369 VVSEILGHASVTFTYNTYVHIIDEQKARAVELLN 402 >UniRef50_C3XGP1 Phage integrase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGP1_9HELI Length = 182 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 33/176 (18%) Query: 223 KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTL---LQP 279 K A+++G+R E+ AL +ED+DL++ I++V + L+ KT +G R V + LQ Sbjct: 17 KIALFTGMRVNEILALKYEDIDLKRNIIHVCKTLSN-GKITTTKTQSGTREVEIIEALQY 75 Query: 280 ALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR 339 AL+ LK++ K+ ++F + + + + Sbjct: 76 ALQELKQE------------------------NKIGYIFANH-----NNKFIAKQRIAKQ 106 Query: 340 WNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 + + + I R Y TRHTFA L+ G + +IA+ +GH+ + Y +I Sbjct: 107 FKEILTKLHIETRTLYSTRHTFASLSLSYGEDLLWIANMLGHKDVSTTCKSYAKYI 162 >UniRef50_B7IY65 DNA integration/recombination/invertion protein n=35 Tax=Bacillus RepID=B7IY65_BACC2 Length = 369 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 30/246 (12%) Query: 167 LLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNA-LMESEKGQSQNLWKFA 225 +L S L A + IS P + + ++ + ++ E L S++ + + A Sbjct: 136 ILKSALNLAVKQNIISRNPADFAEIPKKEKTSIQTWTEEEVKKFLAHSQESRYHIGYLLA 195 Query: 226 VYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP-PKTNAGIRTVTLLQPALEAL 284 + +G+R GE+ L W+D+D EK V + + + KTN+ RT+ + + AL Sbjct: 196 ITTGMRLGEVLGLRWQDIDFEKHTVTINQTSGHDNKIKKTAKTNSSKRTIPVPNETIVAL 255 Query: 285 KEQYKLTGHHRKSEITFYH-------REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG 337 K+ L + + Y E+GR K + HF +K + Sbjct: 256 KKHKILINKEKLRFGSAYLDQDLINCNEFGRIIK-RAHF----------RKSFIR----- 299 Query: 338 ARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 A + GI+ + RHT A LL G NP I+ ++GH M +Y + + Sbjct: 300 -----ATHKVGIKEIKFHDLRHTHATILLKQGVNPKIISERLGHTDISMTLSVYSHVLPN 354 Query: 398 MNDEQI 403 M +E + Sbjct: 355 MQEEAV 360 >UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridia RepID=A4XMZ7_CALS8 Length = 327 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 49/305 (16%) Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 I H + D+ R E H + LY S G ++ T+ + +L S L A ++G + Sbjct: 39 IGHYKLKDL---RPE--HLQALYNSKHES---GLSLSTIKHIHVILHSALDQALKNGLVV 90 Query: 183 TKPFEGV---KKLQRNRIKPDPLSKTE-FNALMESEKGQSQNLWKFAVYSGLRHGELAAL 238 E K + I+ L + + F A +E E+ + L A+ SG+R GEL AL Sbjct: 91 RNVSEATTLPKAKTKKEIRVLTLEEQKRFVAALEGERLKPAFL--LALASGVRLGELLAL 148 Query: 239 AWEDVDLEKGIVNVRRNL-------------TILDMFGPPKTNAGIRTVTLLQPALEALK 285 W+ V+L++G + ++R+L T+L F PKT AGIRT+ + LE LK Sbjct: 149 KWDCVNLKEGTITIKRSLRRIKTYDKSLPTKTML-AFQEPKTAAGIRTIPVPPVILEELK 207 Query: 286 EQYKLTGHHRKSEITFYHREYGRTEKQKLHF---VFMPRVCNGKQKPYYSVSSLGARWNA 342 E HRK ++ + E L F + P + +Y + Sbjct: 208 E-------HRKRQLEEKLKAGSLYEDNNLVFATELGTPIEPRNFLRVFYRI--------- 251 Query: 343 AVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQ 402 +++A + N + RHT+A LL A +P + +GH IY + ++ Sbjct: 252 -IEKANL-DINFHALRHTYATRLLEANEHPKVVQELLGHNDISTTLNIYSHVMPEIKKAA 309 Query: 403 IAMLN 407 LN Sbjct: 310 AMKLN 314 >UniRef50_Q3Z840 Site-specific recombinase, phage integrase family n=6 Tax=Bacteria RepID=Q3Z840_DEHE1 Length = 435 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 19/266 (7%) Query: 151 SNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNAL 210 K G + R+V ++ L+ A + G I P + V+ + + K E L Sbjct: 129 DGKGGLSARSVLYQHRIISKCLKQATKLGLIMRNPADAVEPPRPRKTAISVPDKDELPRL 188 Query: 211 MES-EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPP 265 +++ E + +Y G+R GE AL W+D+DL++ + + L + P Sbjct: 189 LDAFETTPYYVFYCLLLYCGMRRGEALALRWKDIDLKQDTIQIAETAFTLRSGEYVIKEP 248 Query: 266 KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNG 325 KT R + + P ++ L +YK ++ T Y+ + G E FVF NG Sbjct: 249 KTPHSRRCIDI-PPTMKLLLLEYK-------ADQTAYYAKLG-VELGLHDFVFT--RPNG 297 Query: 326 KQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQ 385 + + +++ + AV++AG + + RH A +L AG +P ++ ++GH + Sbjct: 298 EP---LNPNTVTHTFLKAVRKAGFDKLRLHDLRHLHATLMLQAGIHPKIVSERLGHASIN 354 Query: 386 MVYEIYGMWIDDMNDEQIAMLNARLS 411 + + Y + + + + + + LS Sbjct: 355 ITLDTYSHVMPGLQKKAVNVFDKMLS 380 >UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=10 Tax=Bacillus anthracis RepID=C3L682_BACAC Length = 374 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 33/202 (16%) Query: 220 NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVT 275 +L+ A+ +G+R GE+ L W++ DL +G ++V L I D F PKT+ R ++ Sbjct: 193 HLFLLALNTGMRRGEILGLKWKNFDLNEGKISVTETL-IYDENGFRFTEPKTHGSKRLIS 251 Query: 276 LLQ------PALEALKEQYKLT-GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 + Q + +A + ++KL G + + +E G+ +PR Sbjct: 252 IDQNLCKEFKSYKAKQNEFKLLFGQSYEDNDLVFAKETGQP--------ILPR------- 296 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 ++ +N +K+A + + + RHT A LL G NP ++ ++GH + + Sbjct: 297 ------TMTTTFNQFIKKADVPQIRFHDLRHTHATILLKLGINPKIVSERLGHSSIKTTL 350 Query: 389 EIYGMWIDDMNDEQIAMLNARL 410 + Y DM + + L+ L Sbjct: 351 DTYSHVTIDMQESAVLKLSEAL 372 >UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B8Q2_CLOBO Length = 366 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 28/188 (14%) Query: 224 FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM---FGPPKTNAGIRTVTLLQPA 280 A+ +G R GEL A+ W DVDL + + + L +D PKT IRT+TLL+ A Sbjct: 194 LAIQTGCRVGELCAIKWSDVDLIDKTIRIDKTLQRIDCKLALKYPKTQNSIRTITLLETA 253 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRV-C--NGKQ-KPYYSVSSL 336 + LK K R EK+ + + + V C +G+ P+Y + Sbjct: 254 ITFLKNLKK-----------------NRIEKKLKYGIELDYVLCWEDGRPIDPHY----I 292 Query: 337 GARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID 396 + + + + + + RH+ A LL AG N I+ ++GH T + Y Sbjct: 293 SQHFPKLLDKYNLPKIRFHDLRHSHATLLLKAGVNAKIISKRLGHSTVAFTLDTYSHVST 352 Query: 397 DMNDEQIA 404 M E+++ Sbjct: 353 KMQKEEMS 360 >UniRef50_C5SDU6 Integrase family protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDU6_CHRVI Length = 361 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 45/271 (16%) Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS-GFI 181 + H+R SD+ + E L P TV Y+A+L S+L + ++ Sbjct: 99 LGHLRLSDVTPAKIAGCRDELLTSKAPA---------TVHGYLAVLASVLTTCVKRWHWV 149 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLW---KFAVYSGLRHGELAA 237 P V K + LS+ E + L+E+ + +S +L+ A+ +G R GEL Sbjct: 150 KESPMAHVDKPSVANGRTRFLSQDELSRLLEACRASESPDLYLAVVLAITTGARRGELLG 209 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTL---LQPALEALKEQYKLTGHH 294 L W DVDL K ++ +R + T G+R V + ++P LEA + Y+ Sbjct: 210 LRWRDVDLVKDVLYLRVD-------NETTTKGGVRAVRIASQVKPILEARQAGYR---RG 259 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 + ++IT VF RV ++P L + A++RAGI Sbjct: 260 KVADIT------------GAALVFPSRVST--RQPV----DLRTPFRTALRRAGIEGFRW 301 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQ 385 + RH+ A ++ GA+ I + +GH +AQ Sbjct: 302 HDLRHSAASFMAAHGASLVEIGAVLGHRSAQ 332 >UniRef50_C1IBC3 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBC3_9CLOT Length = 400 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 116/296 (39%), Gaps = 53/296 (17%) Query: 119 ESTPISHIRYSDI-----LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLR 173 E+T + ++ D+ NY NEL+ KK +T T+ +L +R Sbjct: 116 ENTNLGVVKLKDLKPLTLQNYYNELIK------------KKNKTTDTIKIINKVLSGGMR 163 Query: 174 FAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTE------FNALMESEKGQSQNLWKFAVY 227 A + I P V L ++++K + ++ T NA+ E + + ++ A+ Sbjct: 164 QAQKEQLILNNPCLFVT-LPKSKVKEEVMTFTMEEQRIFLNAI---EDSRDRCIFNLALG 219 Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP------------PKTNAGIRTVT 275 SGLR GEL AL W D+D V V +++ + F PKT R + Sbjct: 220 SGLRLGELLALKWSDIDFSSNEVKVSKSVKRVKCFDENTNTKTKIIEQLPKTRYSERKIP 279 Query: 276 LLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSS 335 L + + LK + + Y + VF P V G Y + Sbjct: 280 LPKATINELKRHKNIILQEKLMAGDIYIDN---------NLVF-PNVLGG----YIDARN 325 Query: 336 LGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 L R+ + + +A I R + RHT+A L G + I +GH + + IY Sbjct: 326 LTKRYKSILNKANIPYRKFHALRHTYATRLFENGVSLKVIQVLLGHSSMDITANIY 381 >UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepID=A1UH53_MYCSK Length = 379 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 97/242 (40%), Gaps = 18/242 (7%) Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQ 219 TV +L L A + G ++ P VK+ R + L + L+++ KG Sbjct: 137 TVRQVYTVLRQALDVAVRDGLLAANPASKVKRPGVARKEAKYLPAADVARLLDAAKGLRY 196 Query: 220 NLWK-FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVT 275 L +GLR GE+A L W DVDLEKG + VR L+ +D + PKT+ R V Sbjct: 197 YLGVVLMATTGLRRGEVAGLLWSDVDLEKGELTVRHTLSRVDGKLVLTEPKTDRSRRRVP 256 Query: 276 LLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSS 335 L + LK R + + R+ G + + PR + Sbjct: 257 LHAGVVAQLKMHRTQQLQERLAAGDQW-RDTGAVLATEFGTLLDPR-------------N 302 Query: 336 LGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 L A + GI + RH+ A L +G + A +GH + + ++YG Sbjct: 303 LLRTVEIAAAKVGIEDVGAHTMRHSAAVAWLESGVHIKAAADLLGHSSIAITGDLYGHTS 362 Query: 396 DD 397 D+ Sbjct: 363 DE 364 >UniRef50_B7AAK4 Integrase family protein n=3 Tax=Thermus aquaticus Y51MC23 RepID=B7AAK4_THEAQ Length = 416 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 103/249 (41%), Gaps = 27/249 (10%) Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK---KLQRNRIKPDPLSKT-EFNA 209 +G ++RTV L ++ A ++ P VK L++ R KP +T E A Sbjct: 139 RGLSLRTVKKVREKLNAIFEEALALELVARNPVAPVKVRGGLEQEREKPGRTLETWEIEA 198 Query: 210 LMESEKGQSQN----LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI---LDMF 262 L+ + + + + GLR GE L WED+DLEKG++ VRR + Sbjct: 199 LLAALDAHPDPRTALVLRLCLSCGLRKGEALGLQWEDIDLEKGLLYVRRTWSFDGARTAI 258 Query: 263 GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRV 322 PKT +G R V + L L E Y+ ++ G F P V Sbjct: 259 SDPKTASGRRAVPIPSKTLARL-ESYR----------EWWRERLGSYPPPS--FWVFPGV 305 Query: 323 CNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHE 382 NG++ Y+ + +KR G+ + RHT+ LL GA ++ +MGH Sbjct: 306 -NGQEPLGYNTPNRAL--TRILKRLGLPPARVHDLRHTYGSMLLARGAPVELVSERMGHT 362 Query: 383 TAQMVYEIY 391 + + + Y Sbjct: 363 SPSITFNNY 371 >UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoanaerobacter RepID=B0KAZ5_THEP3 Length = 403 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%) Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLL 277 L++ + SG+R E L WED+D + + V+R LT + PKT RT+ L Sbjct: 197 LFELLLISGMRPSEALGLKWEDIDWKNNRIAVQRTLTRVKNNWQLKEPKTPQSRRTIPLP 256 Query: 278 QPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF--------VFMPRV------- 322 + + LKE K ++S+ +EY +K K F + P+V Sbjct: 257 REVMNDLKEHRK-----QQSKEKLKAKEYINYDKDKNKFKPEEWEEKLKDPKVYVDYGLV 311 Query: 323 -CNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGH 381 +P + + +K AG+ Y RHT A LL AG NP ++ ++GH Sbjct: 312 FATETGRPLDLANINYQYFKPLLKNAGLPNIRLYDLRHTCATLLLLAGENPKVVSERLGH 371 Query: 382 ETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + + Y + M +E L L Sbjct: 372 ANITLTLDTYSHVLPTMQEEATQKLKQML 400 >UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepID=B7DTQ3_9BACL Length = 392 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 25/304 (8%) Query: 104 KKTKSQLKTLR--IIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTV 161 K+TK + TLR + + E I I ++ R H + LY D ++ + + R+V Sbjct: 85 KRTKVRPGTLRSYVWLVEHHIIPRIGQLELAKLRPS--HIQKLYTDL-QTGDEHISKRSV 141 Query: 162 DNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL 221 + +L L A + G I+ + V+ + R + + + +A +++ + +S+ Sbjct: 142 LHAHRILHQALDRAVKWGLITRNVTDAVEPPRPARQEMRVWTDEQLDAFLQAAR-KSRYY 200 Query: 222 WKFAVYS--GLRHGELAALAWEDVDLEKGIVNVRRNLTILDM---FGPPKTNAGIRTVTL 276 F + S G+R GE+ AL WEDVDL+ G+V V R+ + PKT +G R++ Sbjct: 201 VAFVLLSSTGMRVGEVLALRWEDVDLQAGLVRVVRSYSYTGKGYRIEEPKTESGRRSIA- 259 Query: 277 LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL 336 L PA+ L ++K R+ + E L +C KP +L Sbjct: 260 LPPAVVDLLRKHKTEQAARRLMVG------SAWEDNDL------VICTAFGKPILQ-HNL 306 Query: 337 GARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID 396 ++ ++R G+ R + RHT A LL G +P + ++GH + Y + Sbjct: 307 RTSFHRIIERTGLPRIRLHDLRHTHATILLQRGVHPKVVQERLGHSDITLTLNTYSHVVP 366 Query: 397 DMND 400 + + Sbjct: 367 GLQE 370 >UniRef50_A5N1D5 Phage integrase-related protein n=2 Tax=Clostridium kluyveri RepID=A5N1D5_CLOK5 Length = 392 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 25/196 (12%) Query: 224 FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL-------TILDMFGPPKTNAGIRTVTL 276 A +GLR E+ L WED+D+ K ++ V+RN ++ D KT + +R + L Sbjct: 205 LAFETGLRQSEITGLKWEDIDINKKLLTVKRNYGYDALKKSLSD--KKTKTKSSLRVINL 262 Query: 277 LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQ-KPYYSVSS 335 +E LK+Q ++ Y + Y + ++ NG P Y Sbjct: 263 FDNTIENLKKQ----KQQQRLNKLLYGKAY-------IESGYICTTSNGNPINPLY---- 307 Query: 336 LGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 + R+ VK+ ++ + RH+ A LL +P ++ ++GH + + + Y Sbjct: 308 ISKRFAQLVKKHNFKKIRFHDLRHSHATMLLKENVHPKIVSQRLGHSSIAITLDTYTHVS 367 Query: 396 DDMNDEQIAMLNARLS 411 D+ + N ++S Sbjct: 368 TDIEKNALLSANEKIS 383 >UniRef50_D2BLD3 Phage integrase n=4 Tax=root RepID=D2BLD3_LACLK Length = 399 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 76/332 (22%), Positives = 132/332 (39%), Gaps = 43/332 (12%) Query: 80 IKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELL 139 ++TFGE+ + + ++ + + ++++ +S L T I + IS I + I E Sbjct: 70 LETFGEVAESFFELYKLQQKVGSIRQMRSNLDTYAIPAFGNKRISKITTAHIQKQVIEWA 129 Query: 140 HGETLYLDNPRSNKKGRTVRTVDNY---IALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 P K+ R V + +Y + ++ + + A G I P V + Sbjct: 130 KNAA----EPLGGKQKRDVGSGKDYKLQLNVINRIFQHALSLGIIDRNPCHSVIIPKVKI 185 Query: 197 IKPDP----LSKTEFNALMESEKGQSQNLW---------KFAVYSGLRHGELAALAWEDV 243 KP+ +KTE + L + W + V SGLR GE AL W DV Sbjct: 186 DKPNKEVKFYTKTELSELFSHIESLDNTKWSTQYFNALIRLLVASGLRIGEAMALEWFDV 245 Query: 244 DLEKGIVNVRRNL---TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 DL+ V+V + T++ PKTN R +++ A+ LK Y Sbjct: 246 DLDNQTVSVSKTTVQRTVIQ--DTPKTNKSNRVISIDSKAVSTLKRWY------------ 291 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT-RH 359 F+ +++ + + P G Y+ ++ + A K + +H RH Sbjct: 292 FFQKKHFMSLGNPHQSLVFP-TWQGNVMDYHGLNYRLKKIEDAAKLTSL----SFHGFRH 346 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 + A L AG I ++GH T QM ++Y Sbjct: 347 SHASLCLNAGMTYKVIQERLGHSTLQMTMDLY 378 >UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus cereus group RepID=A7GRV3_BACCN Length = 376 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 69/314 (21%), Positives = 130/314 (41%), Gaps = 41/314 (13%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F +L +IW + KET +T+ + K L++ + +S+I+ + N+ +++ Sbjct: 63 FSQLVEIWMQEKETTCRPSTLYQYKRILRSRVMPEFGDKKLSNIKPLTVHNFHQKMI--- 119 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 K+G T + + + +L +L + IS+ P + K+ + + Sbjct: 120 ----------KEGLTTKYISSVDVMLKQILDKGVELEMISSNPAKKAKRPKVKKKAQASW 169 Query: 203 SKTEFNALMESEK--GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 + + ++ K G + A+++G+R GE+ AL W D+D EK ++V+R LT++D Sbjct: 170 TIEQAMTFIDCAKLKGSYYIAFVLALHTGMRIGEVLALQWGDIDFEKKTIHVQRTLTLVD 229 Query: 261 ---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 + G KT A R + + + ++ L E K Y +E L + Sbjct: 230 GKYVLGETKTEASNRVIPMTEELVDELVEYQK------------YKKE------NPLDLL 271 Query: 318 FMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 R N K Y++ A+ IR + R TF L+ + N +A Sbjct: 272 ICTR--NKKIVHPYTIRYQMKALCEAIDVPYIRFHD---IRRTFTTILIDSNVNAKVVAK 326 Query: 378 QMGHETAQMVYEIY 391 +GH IY Sbjct: 327 LLGHTNVSTSLNIY 340 >UniRef50_Q3SSJ3 Phage integrase n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SSJ3_NITWN Length = 376 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 24/176 (13%) Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTL 276 L A+++G+R GE+ AL W VDL++ ++ VR + G PPKT AG R VTL Sbjct: 199 LAMIALFTGMRIGEVLALRWGRVDLDRKVIEVREAIEETKAHGIRIKPPKTKAGRRDVTL 258 Query: 277 LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL 336 ++ L++ Y+ T R+ + G+ L F P QK YYS + Sbjct: 259 PDVLVDVLRD-YRKTHLERRVALGL-----GKLPDDALLFA-GPGGSLPSQK-YYSKA-- 308 Query: 337 GARWNAAVKRAGIRRRNPYH-TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 W+ G+ P+H RHT A L+ AG + I+ ++GH + IY Sbjct: 309 ---WSDL--DVGV----PFHGLRHTHASQLIDAGVDIVTISKRLGHAKPDITLRIY 355 >UniRef50_B4ALS6 DNA integration/recombination n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4ALS6_BACPU Length = 363 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 22/181 (12%) Query: 213 SEKGQSQNLWKFA--VYSGLRHGELAALAWEDVDLEKGIVNVR------RNLTILDMFGP 264 S KG+ ++L F +YSGLR GE AL W+ VD +K + VR ++L Sbjct: 191 SRKGRPRDLAMFLLLIYSGLRIGEAVALTWDKVDFKKSEIKVRYTLFREKDLKSNYELLS 250 Query: 265 PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCN 324 PKT + IR V + + L+ + + Y E FVF + Sbjct: 251 PKTESSIRNVPVPPQVIMQLRILKNVQEQVKNDVGELYKDE---------DFVFADN--S 299 Query: 325 GKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETA 384 G +P + R +K+AG+ + P++ RHT+A L AG + ++GH ++ Sbjct: 300 GMPEP---ARNFNYRMATYIKKAGVTKITPHNLRHTYASLLFAAGIDLKEAQRRLGHSSS 356 Query: 385 Q 385 + Sbjct: 357 K 357 >UniRef50_A8LF05 Integrase family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8LF05_FRASN Length = 416 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 99/253 (39%), Gaps = 26/253 (10%) Query: 168 LCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP------LSKTE-FNALMESEKGQSQN 220 L S+LR A I+ K V + R P LS+ + L E++ + Sbjct: 162 LRSVLRQALNEAVITEKISRNVAETLRVPKARKPKRNVAALSRDDGLRLLAEAKSTRHYA 221 Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD-----MFGPPKTNAGIRTVT 275 L+ GLR GE AL W D D G + V R +T + + GP K+ AG RT+T Sbjct: 222 LYVLLAMVGLRRGEALALRWSDFDESAGTLRVVRQVTRVSGVKGLVVGPTKSQAGTRTLT 281 Query: 276 LLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSS 335 L + L+ HR++ ++ K + + P +P Sbjct: 282 LPTRCVRVLQAHRTAQHAHRQAA----------GKRWKENGLIFPSTVGTHMEP----RG 327 Query: 336 LGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 L + +RAG+ P+ RHT A G + I +GH +IY + Sbjct: 328 LNTHLSKLCQRAGLPHLGPHALRHTAATMAYALGVDWKQIQQMLGHTMLSTTMDIYVDLV 387 Query: 396 DDMNDEQIAMLNA 408 D ++ + + L+A Sbjct: 388 DSVHRDAASKLDA 400 >UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp. ACTE RepID=D1XEM4_9ACTO Length = 435 Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 19/217 (8%) Query: 200 DPLSKTEFNALMESEKGQSQ-NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 +PL+ E + + + L++ A+ +GLR GEL L W+D+DL G ++RR L Sbjct: 210 EPLTADEARQFLAAVRNDRLFALYELALRAGLRKGELLGLQWKDLDLHNGTASIRRTLQR 269 Query: 259 LDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL 314 G P KT A R + L + + KE + RK+ E K Sbjct: 270 TQTGGLTALPTKTRASERRIALPSECIHSFKEHRAVQEGERKAA----------AEGWKD 319 Query: 315 HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF 374 + + G P ++L ++ ++RAG+RR + RH+ A LL G Sbjct: 320 NGLVFRTSAGGPIDP----ANLNRSFHTLLERAGLRRIRFHDLRHSTATLLLEQGVELVV 375 Query: 375 IASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 I +GH + +Y + + + L++ L+ Sbjct: 376 IKELLGHAHIGVTATVYAHVRLRLQRQAVETLSSTLA 412 >UniRef50_C3IU95 DNA integration/recombination/inversion protein n=2 Tax=Bacillus thuringiensis RepID=C3IU95_BACTU Length = 392 Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 27/227 (11%) Query: 187 EGVKKLQRNRIKPDPLSKTEFNALME--SEKGQSQNLWKFAV--YSGLRHGELAALAWED 242 E V+ ++ ++ L K E ++ EKG + F++ YSGLR GEL AL W D Sbjct: 167 ETVEDIENDKKAIKYLEKEELAHFLQVAKEKGLDNDYVFFSILAYSGLRAGELLALKWTD 226 Query: 243 VDLEKGIVNVRRNLTILD------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 VD E + + + L D PKT IRT+ + Q ++ LK + ++ Sbjct: 227 VDFENNTIKITKTLYNPDNNSQHYHLLTPKTKGSIRTIKMDQGIMKLLK-----SHKAKQ 281 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL-GARWNAAVKRAGIRRR-NP 354 +E+ Y T Q + F+ +G Y V + R +K + I + P Sbjct: 282 NELKLY------TRPQYVDQGFVITKASG----YPEVMKMIQNRLKRLIKLSNITKNITP 331 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDE 401 + RHT L+ AG I ++GH + IY +M ++ Sbjct: 332 HSFRHTHTSLLIEAGVGIKEIQQRLGHTDIETTMNIYAHMTKNMEEK 378 >UniRef50_Q39UR0 Phage integrase n=3 Tax=Geobacter RepID=Q39UR0_GEOMG Length = 452 Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 38/62 (61%) Query: 340 WNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN 399 W A K +GI + PY RH+FA W LT +P + MGH + +MVYE+YG +ID + Sbjct: 336 WTKAGKASGITDKVPYSMRHSFAAWALTLRIDPNRLVRLMGHGSKKMVYEVYGDYIDGLE 395 Query: 400 DE 401 ++ Sbjct: 396 ED 397 >UniRef50_Q252J3 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q252J3_DESHY Length = 395 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 25/250 (10%) Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES 213 +G T TV +Y A+L L+ A + I + P + V + ++N S E AL + Sbjct: 127 EGHTPNTVIHYHAVLRRALQNAVKKEIIDSNPADRVDRPKKNVYHAQFYSAEEMMALFDE 186 Query: 214 EKGQSQNLW-KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPP------- 265 + K A Y GLR E+ L W+ ++LE+ ++++ + + G Sbjct: 187 ISDDPLEICVKLAAYYGLRRSEVLGLKWDAINLEQKTISIKHKVIEDTVDGKSIAVGEDV 246 Query: 266 -KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI--TFYHREYGRTEKQKLHFVFMPRV 322 KT + RT+ LL P++E L L K E+ + R Y R ++ + Sbjct: 247 LKTKSSFRTLPLL-PSVEKL-----LLAEKEKQEMYRKLFKRSYCRD--------YLDYI 292 Query: 323 CNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHE 382 C + + + ++ A+++A +++ + RH+ A LL G + I +GH Sbjct: 293 CLDQAGKLMRPNYVTEHFSWALEKADLKKIRFHDLRHSCASLLLANGISMKQIQIWLGHS 352 Query: 383 TAQMVYEIYG 392 T +IY Sbjct: 353 TFSTTADIYS 362 >UniRef50_Q854V7 Gp41 n=1 Tax=Mycobacterium phage Che9c RepID=Q854V7_9CAUD Length = 400 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 102/250 (40%), Gaps = 22/250 (8%) Query: 149 PRSNKKGR---TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKT 205 P N K R + R+V+ + LL S+L + G V +++ N PDPL+++ Sbjct: 139 PSPNGKPRKPWSPRSVNYLLGLLVSILESEQKQGHTVRNVAALVDRIEANPTPPDPLTES 198 Query: 206 EFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIV---NVRRNLTILDM 261 E L+ G + W+ A+ +G R E++ L W DVDL+ V N R + Sbjct: 199 EVETLLAHIAGDRYAIAWELAL-AGFRLAEISGLRWCDVDLDARTVTVQNTRLQRGKKRI 257 Query: 262 FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPR 321 PK+ A R + L A K K+ + Y + +V Sbjct: 258 EKTPKSRASRRELPLPDDLFAAFKAARKIQAADQLRLGEAY---------EASGYV---- 304 Query: 322 VCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGH 381 V N P + +++ RW +K AG+R + RHT + G A I++ +GH Sbjct: 305 VVNEAGTP-LTPNAIENRWARVLKAAGLRHVRLHDARHTCGTLMHLRGVPTALISAWLGH 363 Query: 382 ETAQMVYEIY 391 + + Y Sbjct: 364 ASKAFTLQTY 373 >UniRef50_Q11LX6 Phage integrase n=1 Tax=Chelativorans sp. BNC1 RepID=Q11LX6_MESSB Length = 333 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 14/121 (11%) Query: 290 LTGHHRKSEITFYHRE--YGRTEKQKLHFVFMP-----RVCN------GKQKPYYSVSSL 336 LT H K+ I F RE +T+ H V +P R+ N GK Y S S+ Sbjct: 186 LTDLHWKT-IDFQRREAVLWKTKNGHDHVVHLPPHLVVRLANLTTDRGGKVFGYSSRHSV 244 Query: 337 GARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID 396 + W A++KRAGI+ P+ RH FA LL AG +P +A G E+ Q+V +IYG + Sbjct: 245 KSAWKASIKRAGIKPLTPHALRHGFATGLLRAGVDPVTVAWLGGWESPQIVIDIYGHAMK 304 Query: 397 D 397 D Sbjct: 305 D 305 >UniRef50_UPI0001C376B0 phage integrase family site specific recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C376B0 Length = 360 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 24/260 (9%) Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALME- 212 K + R + + + LL S+ ++A + I PF+ V ++ L + E L + Sbjct: 119 KKLSSRYIRDILVLLSSVFKYAVNTYHIYN-PFDDVVIPKKKYSDVKLLDEDEQQILRDE 177 Query: 213 --SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM-FGPPKTNA 269 S ++ + Y+G+R GEL AL W+D+D+EK ++ VR+ + + + +G PKT Sbjct: 178 LFSNPNRTTLGIALSYYTGIRIGELCALQWKDIDIEKRLLTVRKTVQRIQLPYGTPKTK- 236 Query: 270 GIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKP 329 V + +P E+ + IT G + F+ +GK+KP Sbjct: 237 ----VIITEPKSESSVRVIPIPD----CIITLMKIYKGNLDD----FIL-----SGKEKP 279 Query: 330 YYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYE 389 ++ R+N+ +K G+ + + RH FA + GA+ ++ +GH + ++ Sbjct: 280 -TEPRTMQYRFNSFLKNVGLPSIHFHALRHLFASNCIKLGADVKSLSEILGHSSVEITLN 338 Query: 390 IYGMWIDDMNDEQIAMLNAR 409 Y +M E + L+ R Sbjct: 339 RYVHSSFEMKREYLNRLDFR 358 >UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35B62 Length = 406 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 101/248 (40%), Gaps = 15/248 (6%) Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP--LSKTEFNALME 212 G T+R YI + ++L+ A + I+ P GV+ + R D L+ E +E Sbjct: 129 GSTIRQA--YITM-GTMLKSAVMNDIIAKHPMNGVRYTKPVRAVDDIKYLTVEEQEKFLE 185 Query: 213 SEKGQSQNLWKFAVY--SGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM-----FGPP 265 + +S N ++A+ +GLR E+ L W+ +D + + V ++L GPP Sbjct: 186 AA-ARSHNYRQYALLLETGLRTAEMIGLTWDAIDWKNRTLTVNKSLEYRHSQGYWRAGPP 244 Query: 266 KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY--GRTEKQKLHFVFMPRVC 323 KT RT+ L A LK Y + SE EY RT + K + Sbjct: 245 KTQKSYRTIPLTDKAYSILKSCYDEKDSRKSSETLSQVLEYIDSRTGENKCLIMRDLVFV 304 Query: 324 NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHET 383 N + SS AGI+R + RHT+A + G P + +GH + Sbjct: 305 NWRTGEPAKNSSYDTHLYKLCDEAGIKRFCMHALRHTYATRAIERGVQPKVLQQLLGHAS 364 Query: 384 AQMVYEIY 391 + + Y Sbjct: 365 IKTTMDRY 372 >UniRef50_C1SIY0 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIY0_9BACT Length = 386 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 43/253 (16%) Query: 148 NPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEF 207 N N+K R+VR+ N + + G + PF+ VK L+ ++ P ++ E Sbjct: 148 NVVVNRKLRSVRSFFNEVV----------EEGHLKESPFKKVKYLRNEKVDIKPFNQEEL 197 Query: 208 NALME--SEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP 264 L+ +EK + ++ F +SG R E+ L W+ +D E + +R +L Sbjct: 198 ARLLVGFAEKYPAYESFVAFLAFSGCRPNEVVGLKWDKIDWENRKILIREGF-VLGEETL 256 Query: 265 PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVC- 323 KT++ +R + + +P LE L Q G SE F + E+ R R+C Sbjct: 257 LKTDSSVRDIDMTEP-LEVLLLQQLDKGI--DSEYVFVN-EFNR------------RICW 300 Query: 324 -NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHE 382 N +QK ++ +K I R Y RHTFA + G + +++ +GH Sbjct: 301 ENFRQK-----------YHRVLKLKNIVSRPAYQLRHTFASMAIKNGEDILWVSRMLGHS 349 Query: 383 TAQMVYEIYGMWI 395 + Y +I Sbjct: 350 NLKTTLTTYTRYI 362 >UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius RepID=A0JQR3_LACS1 Length = 381 Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 23/247 (9%) Query: 165 IALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP----LSKTEFNALMESEKGQS-- 218 ++++ + L +A + G I + P V K ++ D +K E ++ K S Sbjct: 137 LSIVKNTLDYALRLGMIESNPMLYVIKPKKQASISDKHDNYYNKDELKKFLDVAKDTSLK 196 Query: 219 -QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTV 274 L++ YSG+R GE AL W D+D + + + + L + PKT A R + Sbjct: 197 KYTLFRLLAYSGMRIGECLALTWHDLDYKNNTIAINKTLARTNNGIKIQTPKTKASNRVI 256 Query: 275 TLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVS 334 +L ++ LK ++L RK + + G +F NGK + V Sbjct: 257 SLDNETIQVLK-MWQL--EQRKQLL-----KVGINAMDSKQLIF----SNGKN-SFIIVP 303 Query: 335 SLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMW 394 ++ K+AGI + RHT A L +G + + +++GH Q IY Sbjct: 304 TVRLAIKQIAKKAGIHSITTHGFRHTHATLLFASGLDIKQVQARLGHSNVQTTLNIYTHA 363 Query: 395 IDDMNDE 401 + + D+ Sbjct: 364 MKEKQDK 370 >UniRef50_D1UBS2 Integrase family protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UBS2_9DELT Length = 340 Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 98/252 (38%), Gaps = 44/252 (17%) Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKT--EFNALMESEKGQ 217 + + YI L + F + I P +K R KP L T + A+M Sbjct: 125 SFNRYITYLNVIFNFGVEFEHIEKNPMTNWRKRVMKREKPRDLEITIDDVRAIMAHAAPH 184 Query: 218 SQNLWKFAVYSGLRHG--ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVT 275 Q K + +G R G EL + + DVD + V +R + KT R V Sbjct: 185 VQKAIKLILSTGCRPGKSELLRIKYSDVDFDAKRVRIRGS----------KTARSDRYVP 234 Query: 276 LLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSS 335 L L ++ G +E + F + NG +K + Sbjct: 235 LRDEFLAEIR------GWQDAAESDYI-------------VEFEGKQLNGFKKGF----- 270 Query: 336 LGARWNAAVKRAGIRRRN-PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMW 394 NAAV+R+GI ++ PYH RH FA LL A+ +AS MGH M++++Y Sbjct: 271 -----NAAVRRSGIGKKVVPYHLRHFFASSLLANKADIKAVASLMGHAGPDMLFKVYYHL 325 Query: 395 IDDMNDEQIAML 406 I D E + L Sbjct: 326 IGDSEKEAVEKL 337 >UniRef50_D0WGY0 Putative phage integrase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGY0_9ACTN Length = 353 Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 102/250 (40%), Gaps = 31/250 (12%) Query: 153 KKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALME 212 + G +T LL L+FA G I P + K ++ R + L + E + ++ Sbjct: 70 RDGYAPKTCSKAFRLLSQALKFAVGQGAIDKNPCDFCKPPRQIRSRFIALDRAERSRMLY 129 Query: 213 SEKGQSQNLW---KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPK 266 + L + A+ +G+R GE+ AL W D +G + VRR L + PK Sbjct: 130 LARQDDSPLGFAIEIALTTGMRRGEVCALKWSDFS-SRGTLTVRRALGNAEGGFYIKEPK 188 Query: 267 TNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGK 326 + +GIRT+ L EAL +L G E R+E ++ Sbjct: 189 SLSGIRTIPLASDTNEALG---RLKGA---------FLEANRSEGSASADGYIVGAGESG 236 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHT-----RHTFACWLLTAGANPAFIASQMGH 381 +P Y+ LG + A R N + RHTFA +++ AG + +AS +GH Sbjct: 237 DQP-YNPDRLGRDF------AQFCRDNGFECTFRDLRHTFATFMVGAGVDVRTVASLLGH 289 Query: 382 ETAQMVYEIY 391 M IY Sbjct: 290 ANVAMTLNIY 299 >UniRef50_UPI0001C3746F phage integrase family site specific recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3746F Length = 366 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 112/274 (40%), Gaps = 59/274 (21%) Query: 136 NELLHGETLYLDNPR-SNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR 194 N+ +H + L N R + G + +TV + + + S+ R+ Y+ I F K Sbjct: 115 NDFIHYK---LTNGRLKGQGGLSAKTVRDIMTVYRSVERYVYREYGIRETNFTMPKTESG 171 Query: 195 NRIKPDPLSKTEFNALMESEKGQSQNLWKFAV----YSGLRHGELAALAWEDVDLEKGIV 250 N D L+ E L ES ++ + AV ++GLR GEL L WED+D EK + Sbjct: 172 N---ADVLNCEERKKL-ESYLIKNMDRTNLAVLLCLFTGLRIGELCGLKWEDIDFEKNTL 227 Query: 251 NVRRNLTILD-------MFGPPKTNAGIRTVTL------LQPALEALKEQYKLTGHHRKS 297 +V+R + + + G PK+ IRTV + L ++ + +T + + Sbjct: 228 SVKRTVQRVSRNGKSQVIIGSPKSRTSIRTVPIPIFMMALLRKFRSIDSLFVITNLSKPT 287 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 E PR ++ R+ A +K GIR N + Sbjct: 288 E---------------------PR-------------TMQNRFKAILKLCGIRNVNFHSL 313 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 RHT+A + G +P ++ +GH A + Y Sbjct: 314 RHTYATVCIEKGFDPKALSELLGHADASITLNRY 347 >UniRef50_A4J0G7 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0G7_DESRM Length = 388 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/281 (22%), Positives = 127/281 (45%), Gaps = 29/281 (10%) Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKK---GRTVRTVDNYIALLCSLLRFAYQSG 179 +S +R + I ++L + +D + + K G ++R V +L L AY+ Sbjct: 105 LSDLRAAHIRGLYSKLQKAREIKIDGEKRSFKPLSGTSIRYVHR---VLSKALEDAYREE 161 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKF-AVYSGLRHGELAAL 238 I P + V +N+ + LS + +++ + + + + +V G R GE+ L Sbjct: 162 TIPKNPAKLVTPPTKNKFEAGFLSTKQIREMLDKLREDALYMPVYLSVVLGARRGEVLGL 221 Query: 239 AWEDVDLEKGIVNVRRNLTILDMFGP-----PKTNAGIRTVTLLQPALEALKE-QYKLTG 292 W DVD+E ++++R NL I+D P KT++ R + + ++ALKE + KL Sbjct: 222 QWSDVDMENKLIHIRHNL-IMDNGNPVLREKTKTDSSNRVIVVTDRLIKALKEHKLKL-- 278 Query: 293 HHRKSEITFYHRE-YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR 351 ++ E+ H + Y +++ VC ++ S L ++ +++ G+ Sbjct: 279 --KQKEMKLQHGQLYHKSD----------FVCTWPDGKPFNPSHLSRSFSLRLQKYGLPN 326 Query: 352 RNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 + RH+ A ++ + ++GH T Q+ ++YG Sbjct: 327 IRFHDLRHSNAALMIAQNVPMKGASDRLGHSTIQITNDLYG 367 >UniRef50_C8VWK7 Integrase family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWK7_DESAS Length = 389 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 79/342 (23%), Positives = 145/342 (42%), Gaps = 36/342 (10%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 TF E W + K+ +L T+ + K L + RI+ + H++ DI + +G Sbjct: 65 TFKEFSQKWLESKK-DLAPKTLYRYKEILNS-RILPA----MGHLKIEDIKPFHIMQFYG 118 Query: 142 ETLYLDNPRSNKKGR----TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI 197 L P + G+ + TV + LL ++ A + I T P V+ + + Sbjct: 119 N---LQEPGIREDGKEGTLSPATVLYHHRLLTNIFNAAVKWQIILTNPALRVEAPKAKKH 175 Query: 198 KPDPLSKTEFNALMESEKGQS---QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 K + + AL+ + + Q Q + A+ GLR GE+ L W+D+DL KG + VR+ Sbjct: 176 KATSYEEEDTAALLSALEEQPLKFQAIVYIALGCGLRRGEIMGLEWKDIDLTKGTLEVRQ 235 Query: 255 NLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 + L G PK + R + + + LK Q+++ + ++ ++ + R Sbjct: 236 SSQYLPGHGTFAKSPKNESSERIIAVPTETMSLLK-QHRVQQNEQRLQVGGLWQASDR-- 292 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH-TRHTFACWLLTAG 369 +F +GK S++ +W + + P+H RHT A +++ AG Sbjct: 293 ------LFT--TWDGKPMHPDSIT----KWFSGFLKNNNLSPLPFHGLRHTAASYMIKAG 340 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 IAS++GH + IY ++ E +N L+ Sbjct: 341 IPLKNIASRLGHSSPNTTLNIYAHSFKSVDAEAANKMNDILT 382 >UniRef50_O64373 Integrase n=1 Tax=Lactobacillus phage A2 RepID=O64373_9CAUD Length = 385 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 35/194 (18%) Query: 225 AVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL--------------DMFGPPKTNAG 270 A+YSG R GE+ L WED+D +K +++ + +FGP KT + Sbjct: 203 AIYSGARLGEIGGLTWEDIDEKKSTISIDKTFKYRFVIRNADGSWPDREKVFGPTKTPSS 262 Query: 271 IRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPY 330 +RT+ + P L A +KL R I H +F+ P Sbjct: 263 VRTIK-VSPVLIA--SLHKLILADRIKAIN-----------NPYHLLFLGPTG----LPI 304 Query: 331 YSVSSLGARWNAAVKRAGIRRRN-PYH-TRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 YS + + A+K GI R +H RHT +LL G + +++ ++GHE + Sbjct: 305 YS-NGVNKELRRALKHLGIERPGFGFHGLRHTHGSYLLYKGLDIQYVSHRLGHENVGITT 363 Query: 389 EIYGMWIDDMNDEQ 402 +IY +D M +Q Sbjct: 364 KIYTHLLDAMTQKQ 377 >UniRef50_C6LMN6 Phage integrase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LMN6_9FIRM Length = 313 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 29/193 (15%) Query: 220 NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVT 275 NL+ + +G+R GE+ L + D+D +K +++V+R L ++ G PKT R + Sbjct: 134 NLFAVMLRTGMRSGEIRGLKYTDIDRKKNVIHVQRTLKYIEGQGYLEDTPKTRTSKRDIP 193 Query: 276 LLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSS 335 L + LE L+ Q R +G + ++F CN +P S Sbjct: 194 LTKDILELLEAQ---------------KRYWGFKVTRLDSYLF----CNENGEPL-SRDR 233 Query: 336 LGARWNAAVKR---AG--IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEI 390 + A +K+ AG R P+ RHTFA + AG P + + +GH + M ++ Sbjct: 234 VQAEIERIIKQIHAAGHEFERITPHVFRHTFATRAIEAGMQPQVLKTILGHSSLAMTMDL 293 Query: 391 YGMWIDDMNDEQI 403 Y + D +++ Sbjct: 294 YSHVLPDTKADEM 306 >UniRef50_B5YIK4 Site specific recombinase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIK4_THEYD Length = 345 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 110/274 (40%), Gaps = 65/274 (23%) Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 PI+ I DI ELL G+ L KGRT +V+ IA + LR AY+ Sbjct: 93 PINQITTRDI-----ELLQGDLL---------KGRTPASVNRIIATIKHSLRKAYEWELT 138 Query: 182 S---------TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRH 232 KP +G ++QR R LS E + L+E + + + A+ +G+R Sbjct: 139 EEETLKRVQRVKPLKG--EVQRLRF----LSLEECHKLIEVAEPHLKPIIITALNTGMRK 192 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 GE+ +L W +DL+ G +++ KT G R + L+ L + Sbjct: 193 GEILSLTWSQIDLKHGFIHLE------------KTKNGERRDIPMNDTLKILFRDL-IKN 239 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 S+ F + E G+ ++ + + A KRAGI Sbjct: 240 RRLDSDYVFLNPETGK-----------------------RLTDIKRSFRTACKRAGITDF 276 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQM 386 + RHTFA L+ G + + +GH+T +M Sbjct: 277 RFHDLRHTFASHLIMNGVDLKTVQELLGHKTIKM 310 >UniRef50_A6G8N0 Phage integrase n=2 Tax=Plesiocystis pacifica SIR-1 RepID=A6G8N0_9DELT Length = 369 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 77/260 (29%), Positives = 111/260 (42%), Gaps = 38/260 (14%) Query: 150 RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP-FEGVKKLQRNRIKPDPLSKTEFN 208 R + G + T+ N++ +L LL A + + P KK R D LSK E Sbjct: 139 RKHADGLSTSTISNHLIVLKRLLNVARRWELLDRIPEIPTPKKPART----DFLSKDEAR 194 Query: 209 ALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTN 268 AL+ + Q ++L + +GLR GEL L W DVDLE G V V + +T + G PK+ Sbjct: 195 ALLVGAEEQWRSLVLLGLRTGLRLGELRGLRWRDVDLEGGRVRVEQAVTNAGI-GTPKSG 253 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 G R+V L + EAL + RK + + + GR P N Sbjct: 254 KG-RSVPLARDIREAL--AVRRGPRRRKPDTLVFAQSDGR-----------PLAHN---- 295 Query: 329 PYYSVSSLGARWNAAVKRAGIRRR-NPYHTRHTFACWLLTAGANPAFIASQMGHET---- 383 ++G A + AGI RR P+ RHTFA + AG + +GH Sbjct: 296 ------TIGRALTRAAEAAGIERRITPHVLRHTFASHAVLAGVPIRIVQGWLGHADITMT 349 Query: 384 ---AQMVYEIYGMWIDDMND 400 A + E +G ID + D Sbjct: 350 MRYAHLSPEGHGGMIDRLLD 369 >UniRef50_D0L542 Integrase family protein n=3 Tax=Bacteria RepID=D0L542_GORB4 Length = 463 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 104/265 (39%), Gaps = 32/265 (12%) Query: 150 RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNA 209 R N K + T A L S L A + +S ++ + +R K P ++ A Sbjct: 139 RRNPKALSPATQRRVHATLRSALTSAKRKHLVSFNAAADMELPRASRPKVKPWEASDLGA 198 Query: 210 LME-SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD-------- 260 ++ + K + ++ +GLR GE + W DVD EK V V + L +D Sbjct: 199 FLDHATKDRLGAFFETIAMTGLRRGEALGIRWPDVDFEKARVTVNQQLVEVDGTGIDCPF 258 Query: 261 --------MFGPPKTNAG-IRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 FGP KT +G R V L L L Q R+ Y+ Sbjct: 259 CGGEHKQFRFGPCKTASGEARIVDLDSGTLGVLMAQRLRQEQEREQWGDAYNDH------ 312 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 VF +G P V+ A+++A AG+RR + RH A +L AG Sbjct: 313 ---QLVFARE--DGSPIPPADVT---AKFHALTDEAGLRRIRLHDLRHGQASLMLAAGVP 364 Query: 372 PAFIASQMGHETAQMVYEIYGMWID 396 A ++ ++GH + + + Y +D Sbjct: 365 IAVVSKRLGHSSISITSDTYSHLLD 389 >UniRef50_UPI0001C37D82 integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37D82 Length = 339 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/251 (21%), Positives = 110/251 (43%), Gaps = 39/251 (15%) Query: 153 KKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE--GVKKLQRNRIKPDPLSKTEFNAL 210 +K + +++ N +L L A +G+I P + + K++++ + LS E Sbjct: 90 EKALSPKSIKNIHGILHKSLDVAVDNGYILANPAKKNDLPKIKKSEVHA--LSVEEIKKF 147 Query: 211 MESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNA 269 + + KG Q + L+K +++G+R GE+ L W+ ++ E+G +++ R L + PK++ Sbjct: 148 LIAIKGCQMEYLFKITLFTGMRAGEIMGLTWDCINFEEGYISLYRQLVRIK---NPKSDN 204 Query: 270 GIRTVTLLQ--------PALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPR 321 T + L+ P + + +K+ EK+ FVF Sbjct: 205 YYYTFSSLKNGRSRRLYPPMFVMNMLFKM------------------KEKKTSDFVF--- 243 Query: 322 VCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGH 381 CN + +++ S++ + GI + RHT+A + + + + MGH Sbjct: 244 -CNSENN-HFTHSAIYNSLKRITGKIGITDFRFHDLRHTYATISIRSDVDTMTLKENMGH 301 Query: 382 ETAQMVYEIYG 392 +A ++YG Sbjct: 302 HSAAFTLDVYG 312 >UniRef50_UPI0001694281 DNA integration/recombination/invertion protein n=8 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694281 Length = 413 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/267 (22%), Positives = 113/267 (42%), Gaps = 41/267 (15%) Query: 146 LDNPRSNKKGRTVR----TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 L P + K G++ + T+ +L ++ A + I T P GVKK + Sbjct: 136 LSKPEARKDGKSGKLSPGTIQYIHRVLKNIFNRATEWQLIKTNPIVGVKKPK-------- 187 Query: 202 LSKTEFNALMESEK-------GQSQNLWKF----AVYSGLRHGELAALAWEDVDLEKGIV 250 + +TEF+ E E + W+ ++ G R GEL AL W +VD + + Sbjct: 188 VEQTEFDFYDEDEAREAIAALSKEPRRWRLLILGSMVGGFRRGELLALEWSNVDFDNMTL 247 Query: 251 NVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALK-EQYKLTGHHRKSEITFYHRE 305 ++ +++++ + PK+ + R V + ++ LK +Y+ +K +++ + Sbjct: 248 SINKSISLTKDGRAVEKAPKSKSSKRIVDMPDWYMDELKVHEYEW----KKEKLSVGDKW 303 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWL 365 G + H F KP++ WN KR ++R + RH+ A L Sbjct: 304 RGGDRQYVFHAGF--------GKPFHHTYPT-EWWNGFTKRHNLKRVRFHDLRHSSATLL 354 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYG 392 + AGA+ + ++GH Q +IY Sbjct: 355 IEAGASMKAVQQRLGHSKHQTTADIYA 381 >UniRef50_A4J7T2 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7T2_DESRM Length = 409 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%) Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QS 218 TV +I +L +L A + P ++ + + KP LS+ EF + ++ +G + Sbjct: 126 TVRKHILVLRKMLYDALKQ----KSPCTDIEVPKAEKYKPYVLSEKEFEKIHDAVRGTRD 181 Query: 219 QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVT 275 + + A + GLR GE+ L W+DV EKG + V N+ I + + PK++ G+R+V Sbjct: 182 EPIVLLAAWCGLRLGEIFGLKWDDVSWEKGTIRVDENMAISEDGYVDKKPKSDNGLRSVV 241 Query: 276 LLQPALEALKE 286 + QP + LK+ Sbjct: 242 VPQPLMAILKD 252 >UniRef50_P62904 Transposase from transposon Tn1545 n=57 Tax=Bacteria RepID=TNR5_STRA5 Length = 405 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 102/256 (39%), Gaps = 25/256 (9%) Query: 150 RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE-GVKKLQRNRIKPDPLSKTE-- 206 R ++ G +T++NY L + A Q + PF+ +K + + P + E Sbjct: 137 RMSENGYAYQTINNYKRSLKASFYIAIQDDCVRKNPFDFQLKAVLDDDTVPKTVLTEEQE 196 Query: 207 --FNALMESEKGQSQNLWKFAVY--SGLRHGELAALAWEDVDLEKGIVNVR----RNLTI 258 A +++K S+N + + +GLR E L D+D E +VN+ R+ I Sbjct: 197 EKLLAFAKADKTYSKNYDEILILLKTGLRISEFGGLTLPDLDFENRLVNIDHQLLRDTEI 256 Query: 259 LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVF 318 PKT +G R V +++ A +A K + ++ EI Y F+F Sbjct: 257 GYYIETPKTKSGERQVPMVEEAYQAFKRVLANRKNDKRVEIDGYS-----------DFLF 305 Query: 319 MPRVCNGKQKPYYS--VSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 + R K Y+ + L ++N + P+ RHTF AG NP + Sbjct: 306 LNRKNYPKVASDYNGMMKGLVKKYNK-YNEDKLPHITPHSLRHTFCTNYANAGMNPKALQ 364 Query: 377 SQMGHETAQMVYEIYG 392 MGH M Y Sbjct: 365 YIMGHANIAMTLNYYA 380 >UniRef50_B2V4P6 Phage integrase family protein n=9 Tax=root RepID=B2V4P6_CLOBA Length = 382 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 21/189 (11%) Query: 223 KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM----FGPPKTNAGIRTVTLLQ 278 + A +G+R GE+ L W+ VD EK + + + L F PKT IRT+++ Sbjct: 197 QIAFNTGMRVGEVCGLTWDCVDFEKKTIRIEKILIFKTKQGYEFSTPKTKGSIRTISIGD 256 Query: 279 PALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA 338 + LK ++K+ ++Y+ +F VC + + +++SL Sbjct: 257 TLINILKTHKNWQEENKKNYGSYYNDN---------NF-----VCTKENGSFVTMTSL-- 300 Query: 339 RWNAAVKRAGIRRRNPYHT-RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 R+ + + ++ + +H+ RHT A LL GAN I ++GH ++Y Sbjct: 301 RYLSRIINMELQIKFNFHSLRHTHATMLLEGGANIKDIQDRLGHSKFSTTMDLYSHVTAK 360 Query: 398 MNDEQIAML 406 M + + +L Sbjct: 361 MQNSTVNIL 369 >UniRef50_C1CUZ9 Putative phage integrase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CUZ9_DEIDV Length = 387 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 82/191 (42%), Gaps = 19/191 (9%) Query: 224 FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPA 280 + +GLR GEL L W VDL + V NLT D G PKT R V L + A Sbjct: 213 LGLQTGLRRGELLGLKWSAVDLAGKTLKVVGNLTENDGHRAVGNPKTRESRRVVPLSEEA 272 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW 340 + LK + R E T +G T+ FVF P V Q P S++ + Sbjct: 273 VRVLKAVREW----RDLEST--RPGWGGTD-----FVF-PTVDGKMQHP----SNINRKV 316 Query: 341 NAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND 400 A +AG+R + + TRHTF L G + I+ +GH+T + +Y + Sbjct: 317 KALTTKAGVRYLSMHATRHTFVTLLAATGVSLQHISKLIGHKTPLVTMTVYSHVFKEEVA 376 Query: 401 EQIAMLNARLS 411 + L +LS Sbjct: 377 APVLNLTGKLS 387 >UniRef50_Q1MRZ7 Prophage DLP12 integrase (Fragment) n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MRZ7_LAWIP Length = 388 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 12/108 (11%) Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFI-----STKPFEGVKKLQRNRIKPDPLSKTEFNA 209 G++ +TV N +ALL +LRF ++GF S FE K + IK + L++T+ A Sbjct: 154 GKSPQTVLNTLALLRRILRFGEKNGFCTLPDRSQLVFEMPKV---DNIKTENLTETQLKA 210 Query: 210 LMESEKGQSQNLW----KFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 LME+ ++ + + A+ +G+R G L AL W D+D E+GI+ ++ Sbjct: 211 LMEALDAETDQVMASCLRLALVTGMRKGALLALEWTDLDFEQGIITLQ 258 >UniRef50_C2KIC3 Bacteriophage integrase n=2 Tax=Leuconostoc mesenteroides subsp. cremoris ATCC 19254 RepID=C2KIC3_LEUMC Length = 375 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 77/330 (23%), Positives = 129/330 (39%), Gaps = 52/330 (15%) Query: 76 TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 TT + T EL D+W + + + +T+ KT + I T ++ I+ D+ Y Sbjct: 64 TTPNVMTVKELYDMWLETYQHTVEESTLNKTMNVFNVHIIPAWGDTHVTDIKPLDLQRYI 123 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 N + G+ L+ R + Y L LL A + I PF ++ + Sbjct: 124 NTM-QGKILHY------------RKITGY---LRRLLNIAVRMDMIPVDPFTKIEMPKER 167 Query: 196 RI---KPDPLSKTEFNALMESEKGQ-------SQNLWKFAVYSGLRHGELAALAWEDVDL 245 R + + EF A +E Q + L + +G+R EL AL WE VD Sbjct: 168 RQVNKRKQFMDVDEFKAFLEVLDSQYKYINQQAYTLLRLGALTGMRTEELLALQWEQVDF 227 Query: 246 EKGIVNV----RRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 G +++ R PK+ RT+ + L L + Y+++ H S F Sbjct: 228 NGGYISIVQALGRGFNGGTYIKAPKSQTSKRTLKIDNKMLAVLSDWYEVS--HYNSNDDF 285 Query: 302 YHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTF 361 G+T + V P K + VS ++ AV G+ + + RHT+ Sbjct: 286 VFNNQGKTLQ-----VMRPN------KWLHDVSD---KYGVAV---GL---SMHKLRHTW 325 Query: 362 ACWLLTAGANPAFIASQMGHETAQMVYEIY 391 A L GA+ + + +GH M ++Y Sbjct: 326 ATLALDQGASVKQVQTYLGHADVSMTLDVY 355 >UniRef50_A6BHH7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A6BHH7_9FIRM Length = 405 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/277 (23%), Positives = 109/277 (39%), Gaps = 45/277 (16%) Query: 149 PRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFN 208 P + KGR LL ++ A FIS P K R + K L K + Sbjct: 144 PSAGNKGR---------ELLSIAMKDAAGDKFISYNPMPETKPYPRVKPKVRVLGKEKLK 194 Query: 209 ALMESEKGQSQNLWKFAV----YSGLRHGELAALAWEDVDLEKGIVNVRRNL-------- 256 +E+ S+N W + + GLR GE+ L ++D D EK V + R L Sbjct: 195 VFLEA---ASKNPWYLEILLGLFCGLRKGEILGLKFQDFDFEKQTVRISRQLVGNLKLKE 251 Query: 257 ---TILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 T+ + + PKT R + + + ++ +K + +L RK++ ++ + Sbjct: 252 KEFTVTEYAVIERNPKTENSYRILRVPKVVMQEVKRRQQLI-ELRKTDPGIEYKNFD--- 307 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 VC + S++++ R G+ + RH FA L+ G Sbjct: 308 ----------YVCCQENGEPRSLTAMNQALTKICNRNGLANITVHGLRHMFATILIELGV 357 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 I+ +GH + YE Y +D+ D+ IA +N Sbjct: 358 PLFKISGLLGHSSVHTTYEYYCEIMDE-QDKIIAFVN 393 >UniRef50_C3WPY1 DNA integration/recombination/invertion protein n=3 Tax=Fusobacterium RepID=C3WPY1_9FUSO Length = 416 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 117/257 (45%), Gaps = 26/257 (10%) Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQ 219 TV +Y LL + ++A + I+ P + V+K ++ + + + E N L++ K + + Sbjct: 165 TVLHYHYLLSLVFKYALRHKIITRNPLDSVEKPKKKKYVAEVYNAEEINILLDLLKREEE 224 Query: 220 NLW---KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG--------PPKTN 268 NL+ A Y GLR E+ L W ++ E+ + + + ++ G K+ Sbjct: 225 NLYFGVLMAAYFGLRRSEVIGLKWSSINFEENTITIMSTVKETNIDGKHIFVCQDKTKSP 284 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQ- 327 AG+R+ +L E L E + ++K + + Y +K+ ++++ GK+ Sbjct: 285 AGLRSFSLPIEIKELLLEIKEKQEENKK----YLGKGYYMEDKE---YIYVDD--GGKRL 335 Query: 328 KPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMV 387 +P Y L R+ +K+ ++ + RH+ A L A I + +GH + + Sbjct: 336 RPNY----LTTRFGKFLKKFNLKHIRFHDLRHSCATILYDNNAGIKEIQTYLGHSSVKTT 391 Query: 388 YEIYGMWIDDMNDEQIA 404 EIY + + + ND+ I Sbjct: 392 MEIY-VHLMNRNDKSIV 407 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Ta... 563 e-159 UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter c... 404 e-111 UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damsel... 397 e-109 UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Provide... 397 e-109 UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteria... 392 e-107 UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH 375 e-102 UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio ... 370 e-101 UniRef50_P76168 Putative lambdoid prophage Qin defective integra... 346 1e-93 UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria muco... 333 1e-89 UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID... 329 2e-88 UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria R... 327 4e-88 UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis... 314 4e-84 UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobac... 312 2e-83 UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobact... 310 5e-83 UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8H... 310 5e-83 UniRef50_C6DJ77 Integrase family protein n=4 Tax=Enterobacteriac... 303 6e-81 UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1Z... 303 9e-81 UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales... 301 2e-80 UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp... 300 5e-80 UniRef50_B0KSD4 Integrase family protein n=1 Tax=Pseudomonas put... 296 9e-79 UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanell... 296 1e-78 UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 R... 294 5e-78 UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q1... 286 1e-75 UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auens... 285 2e-75 UniRef50_C4TVA5 Bacteriophage integrase n=3 Tax=Enterobacteriace... 284 3e-75 UniRef50_Q1QXU7 Phage integrase n=4 Tax=root RepID=Q1QXU7_CHRSD 284 4e-75 UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crun... 284 4e-75 UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaprot... 283 1e-74 UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenic... 282 2e-74 UniRef50_D0J3Y8 Phage integrase n=5 Tax=Burkholderiales RepID=D0... 278 3e-73 UniRef50_C8VWS4 Integrase family protein n=1 Tax=Desulfotomaculu... 276 8e-73 UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degen... 276 1e-72 UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoana... 275 2e-72 UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_... 272 1e-71 UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellul... 271 5e-71 UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovi... 270 7e-71 UniRef50_C3K9Z5 Putative phage integrase n=1 Tax=Pseudomonas flu... 270 8e-71 UniRef50_B1J5J4 Integrase family protein n=4 Tax=Pseudomonas Rep... 269 1e-70 UniRef50_C0VGS2 Phage integrase n=2 Tax=Acinetobacter RepID=C0VG... 269 1e-70 UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum t... 268 2e-70 UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovi... 268 3e-70 UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillu... 267 5e-70 UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum th... 264 6e-69 UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepI... 263 7e-69 UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces gr... 260 6e-68 UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus... 258 3e-67 UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiotherm... 258 4e-67 UniRef50_C8VWK7 Integrase family protein n=1 Tax=Desulfotomaculu... 256 9e-67 UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostri... 256 1e-66 UniRef50_A4ILC8 DNA integration/recombination/invertion protein ... 256 1e-66 UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp.... 255 2e-66 UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5... 254 4e-66 UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6G... 254 5e-66 UniRef50_B0KAT2 Phage integrase family protein n=7 Tax=Clostridi... 254 5e-66 UniRef50_C3EB65 DNA integration/recombination/invertion protein ... 254 6e-66 UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae ... 253 9e-66 UniRef50_D1C8V1 Integrase family protein n=1 Tax=Sphaerobacter t... 251 3e-65 UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus Rep... 251 3e-65 UniRef50_Q3Z840 Site-specific recombinase, phage integrase famil... 251 4e-65 UniRef50_A8MGP9 Integrase family protein n=1 Tax=Alkaliphilus or... 250 7e-65 UniRef50_A1TPL3 Phage integrase family protein n=1 Tax=Acidovora... 250 8e-65 UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, ... 250 9e-65 UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovi... 249 2e-64 UniRef50_Q0AUP6 Phage integrase n=1 Tax=Syntrophomonas wolfei su... 248 2e-64 UniRef50_B8I354 Integrase family protein n=1 Tax=Clostridium cel... 247 4e-64 UniRef50_B7IY65 DNA integration/recombination/invertion protein ... 247 4e-64 UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase famil... 247 4e-64 UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum th... 247 4e-64 UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum th... 247 6e-64 UniRef50_Q7N1I7 Similar to bacteriophage integrase n=8 Tax=Enter... 246 1e-63 UniRef50_Q2T7M7 Bbp50 n=13 Tax=root RepID=Q2T7M7_BURTA 246 2e-63 UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, ... 244 4e-63 UniRef50_A8L4Q7 Integrase family protein n=9 Tax=Actinomycetales... 243 7e-63 UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridi... 243 8e-63 UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5... 243 1e-62 UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53... 242 1e-62 UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C ... 242 2e-62 UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilu... 242 2e-62 UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degen... 242 2e-62 UniRef50_C2RY84 Prophage LambdaBa04, site-specific recombinase, ... 241 5e-62 UniRef50_D2BJR0 Site-specific recombinase, phage integrase famil... 240 6e-62 UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halotherm... 240 7e-62 UniRef50_B6BNI8 Phage integrase n=1 Tax=Campylobacterales bacter... 240 7e-62 UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodo... 239 1e-61 UniRef50_A7VZ12 Putative uncharacterized protein n=2 Tax=Clostri... 239 2e-61 UniRef50_A5N1F6 Integrase-related protein n=3 Tax=Clostridia Rep... 238 3e-61 UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillu... 237 4e-61 UniRef50_B0TI08 Phage integrase family protein n=14 Tax=root Rep... 237 4e-61 UniRef50_A9VJZ8 Integrase family protein n=15 Tax=Bacillus cereu... 237 8e-61 UniRef50_C1CZ59 Putative Tyrosine recombinase xerC-like protein ... 235 2e-60 UniRef50_D1BL69 Integrase family protein n=1 Tax=Veillonella par... 235 2e-60 UniRef50_Q3IEL8 Putative phage integrase n=1 Tax=Pseudoalteromon... 235 3e-60 UniRef50_A6P1V8 Putative uncharacterized protein n=2 Tax=Bactero... 235 3e-60 UniRef50_UPI0001694281 DNA integration/recombination/invertion p... 234 5e-60 UniRef50_B7WQQ6 Integrase family protein n=1 Tax=Comamonas testo... 234 7e-60 UniRef50_Q6ALN4 Related to pore-forming cytotoxin integrase n=1 ... 233 7e-60 UniRef50_A8ZS80 Integrase family protein n=1 Tax=Desulfococcus o... 233 8e-60 UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilu... 233 8e-60 UniRef50_C5UVC6 Site-specific recombinase, phage integrase famil... 233 1e-59 UniRef50_A4J0G7 Phage integrase family protein n=1 Tax=Desulfoto... 232 1e-59 UniRef50_A9KI10 Integrase family protein n=1 Tax=Clostridium phy... 232 1e-59 UniRef50_A2V4W2 Phage integrase n=5 Tax=Gammaproteobacteria RepI... 232 2e-59 UniRef50_Q252J3 Putative uncharacterized protein n=1 Tax=Desulfi... 232 2e-59 UniRef50_UPI000169495E prophage LambdaBa04, site-specific recomb... 232 2e-59 UniRef50_A8RK44 Putative uncharacterized protein n=1 Tax=Clostri... 231 3e-59 UniRef50_D2BLD3 Phage integrase n=4 Tax=root RepID=D2BLD3_LACLK 231 4e-59 UniRef50_C4FP65 Putative uncharacterized protein n=1 Tax=Veillon... 231 5e-59 UniRef50_B0PGN1 Putative uncharacterized protein n=2 Tax=Clostri... 231 6e-59 UniRef50_C5WEI1 Site-specific recombinase, phage integrase famil... 231 6e-59 UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rh... 230 9e-59 UniRef50_C1IBC3 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FA... 229 1e-58 UniRef50_A4XMV7 Phage integrase family protein n=2 Tax=Caldicell... 229 1e-58 UniRef50_C9AMW3 Phage integrase n=8 Tax=Enterococcus faecium Rep... 228 3e-58 UniRef50_C4V5B3 Prophage LambdaCh01, site-specific recombinase p... 228 3e-58 UniRef50_C0BF20 Putative uncharacterized protein n=1 Tax=Coproco... 228 3e-58 UniRef50_Q30RZ4 Phage integrase n=1 Tax=Sulfurimonas denitrifica... 228 4e-58 UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF... 227 4e-58 UniRef50_UPI0001C37C27 integrase family protein n=1 Tax=Ruminoco... 227 7e-58 UniRef50_B4V6V4 Phage integrase n=6 Tax=Streptomyces RepID=B4V6V... 227 7e-58 UniRef50_A3DCS0 Phage integrase n=6 Tax=Bacteria RepID=A3DCS0_CLOTH 226 9e-58 UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius... 226 1e-57 UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus... 226 1e-57 UniRef50_A4J1T6 Phage integrase family protein n=1 Tax=Desulfoto... 226 1e-57 UniRef50_C1IAU4 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FA... 226 1e-57 UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus Re... 226 1e-57 UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, ... 226 1e-57 UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK... 225 2e-57 UniRef50_Q1CP24 DNA integration/recombination/inversion protein ... 225 2e-57 UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium R... 225 2e-57 UniRef50_D0S8U2 Phage integrase n=1 Tax=Acinetobacter johnsonii ... 225 3e-57 UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella mul... 225 3e-57 UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter al... 224 3e-57 UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp... 224 4e-57 UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-r... 224 4e-57 UniRef50_Q30S15 Phage integrase n=2 Tax=Campylobacterales RepID=... 224 4e-57 UniRef50_A7N7U1 Putative uncharacterized protein n=1 Tax=Vibrio ... 224 5e-57 UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integra... 223 7e-57 UniRef50_Q9F0J7 Integrase-like protein n=7 Tax=Staphylococcus Re... 222 1e-56 UniRef50_C0EC03 Putative uncharacterized protein n=1 Tax=Clostri... 222 1e-56 UniRef50_A8LF05 Integrase family protein n=1 Tax=Frankia sp. EAN... 222 2e-56 UniRef50_D1PRY2 Site-specific recombinase, phage integrase famil... 222 3e-56 UniRef50_A1HTM7 Phage integrase family protein n=1 Tax=Thermosin... 221 3e-56 UniRef50_C9A167 Integrase n=1 Tax=Enterococcus gallinarum EG2 Re... 221 3e-56 UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostri... 221 3e-56 UniRef50_A8FW51 Putative pore-forming cytotoxin integrase n=1 Ta... 221 4e-56 UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobac... 221 5e-56 UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaeroc... 221 5e-56 UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostrid... 221 6e-56 UniRef50_C2BD46 Possible phage integrase n=1 Tax=Anaerococcus la... 220 7e-56 UniRef50_D0L542 Integrase family protein n=3 Tax=Bacteria RepID=... 220 7e-56 UniRef50_A2RHC7 Phage integrase n=3 Tax=root RepID=A2RHC7_LACLM 220 7e-56 UniRef50_A6FXR9 Phage integrase n=1 Tax=Plesiocystis pacifica SI... 220 8e-56 UniRef50_C2NSI2 DNA integration/recombination/invertion protein ... 220 1e-55 UniRef50_A4XLL4 Phage integrase family protein n=1 Tax=Caldicell... 219 1e-55 UniRef50_Q03GP3 Integrase n=1 Tax=Pediococcus pentosaceus ATCC 2... 219 1e-55 UniRef50_C0EE56 Putative uncharacterized protein n=1 Tax=Clostri... 219 1e-55 UniRef50_Q03L48 Integrase n=30 Tax=Streptococcus RepID=Q03L48_STRTD 219 1e-55 UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteri... 219 1e-55 UniRef50_C8NHZ6 Phage integrase family site-specific recombinase... 219 1e-55 UniRef50_C6LG06 Prophage LambdaBa02, site-specific recombinase, ... 219 2e-55 UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridi... 218 3e-55 UniRef50_A6TLJ2 Phage integrase family protein n=1 Tax=Alkaliphi... 218 4e-55 UniRef50_Q82ZU2 Site-specific recombinase, phage integrase famil... 218 4e-55 UniRef50_B0UFZ7 Integrase family protein n=3 Tax=Methylobacteriu... 217 5e-55 UniRef50_A5N1D5 Phage integrase-related protein n=2 Tax=Clostrid... 217 5e-55 UniRef50_C2EIM6 Phage integrase n=1 Tax=Lactobacillus salivarius... 217 5e-55 UniRef50_Q24ZE5 Putative uncharacterized protein n=1 Tax=Desulfi... 217 6e-55 UniRef50_B2TMD1 Prophage LambdaBa04, site-specific recombinase, ... 217 6e-55 UniRef50_A7B6B9 Putative uncharacterized protein n=2 Tax=Clostri... 216 1e-54 UniRef50_C7T893 Phage integrase n=5 Tax=Lactobacillus RepID=C7T8... 216 1e-54 UniRef50_A6NY15 Putative uncharacterized protein n=1 Tax=Bactero... 216 1e-54 UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC 216 1e-54 UniRef50_B0ABY5 Putative uncharacterized protein n=3 Tax=Clostri... 216 1e-54 UniRef50_B2THD3 Site-specific recombinase, phage integrase famil... 216 1e-54 UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36... 216 2e-54 UniRef50_Q0H247 DNA integration/recombination protein n=6 Tax=ro... 216 2e-54 UniRef50_C4ZBA5 Phage integrase family protein n=10 Tax=Firmicut... 215 2e-54 UniRef50_B9KYK7 Putative integrase n=1 Tax=Thermomicrobium roseu... 215 2e-54 UniRef50_UPI0001C375E4 hypothetical protein RflaF_02473 n=2 Tax=... 215 2e-54 UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostrid... 215 3e-54 UniRef50_C7N6A1 Site-specific recombinase XerD n=1 Tax=Slackia h... 215 3e-54 UniRef50_Q65KE0 Lambda integrase-like, N-terminal,DNA breaking-r... 215 3e-54 UniRef50_C1SIY0 Site-specific recombinase XerD n=1 Tax=Denitrovi... 214 4e-54 UniRef50_C3IU95 DNA integration/recombination/inversion protein ... 214 4e-54 UniRef50_B0VUJ0 Putative integrase n=1 Tax=Acinetobacter baumann... 214 4e-54 UniRef50_UPI0001C37419 Phage integrase n=1 Tax=Ruminococcus flav... 214 6e-54 UniRef50_D2Q711 Phage integrase n=2 Tax=Bifidobacterium dentium ... 214 6e-54 UniRef50_P96629 ICEBs1 integrase n=1 Tax=Bacillus subtilis RepID... 213 8e-54 UniRef50_A8MGA1 Integrase family protein n=7 Tax=Clostridiaceae ... 213 8e-54 UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostri... 213 1e-53 UniRef50_B2UXR9 Phage integrase n=3 Tax=Clostridium RepID=B2UXR9... 213 1e-53 UniRef50_A7VVX9 Putative uncharacterized protein n=2 Tax=Clostri... 212 3e-53 UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum t... 212 3e-53 UniRef50_B0MMM2 Putative uncharacterized protein n=1 Tax=Eubacte... 211 3e-53 UniRef50_C5UUP0 Phage integrase n=1 Tax=Clostridium botulinum E1... 211 3e-53 UniRef50_C2KIC3 Bacteriophage integrase n=2 Tax=Leuconostoc mese... 211 3e-53 UniRef50_C1B977 Putative integrase n=2 Tax=Nocardiaceae RepID=C1... 211 4e-53 UniRef50_UPI0001BCCDB9 integrase family protein n=1 Tax=Selenomo... 211 4e-53 UniRef50_A0JQA1 Phage integrase n=2 Tax=Lactobacillales RepID=A0... 211 5e-53 UniRef50_Q831G3 Site-specific recombinase, phage integrase famil... 211 5e-53 UniRef50_C2YK72 Phage integrase n=3 Tax=Bacillus cereus group Re... 210 7e-53 UniRef50_C2F0I9 Transposon integrase n=3 Tax=Firmicutes RepID=C2... 210 7e-53 UniRef50_D1VST0 Phage integrase n=1 Tax=Peptoniphilus lacrimalis... 210 9e-53 UniRef50_C7CS77 Predicted protein n=3 Tax=Enterococcus faecalis ... 209 2e-52 UniRef50_B4AH95 DNA integration/recombination/invertion protein ... 209 2e-52 UniRef50_C7WMG1 Integrase n=9 Tax=Enterococcus RepID=C7WMG1_ENTFA 209 2e-52 UniRef50_Q87MU5 Putative pore-forming cytotoxin integrase n=2 Ta... 209 2e-52 UniRef50_C0C1S7 Putative uncharacterized protein n=1 Tax=Clostri... 209 2e-52 UniRef50_C0QBZ6 Predicted bacteriophage P4 integrase n=1 Tax=Des... 209 2e-52 UniRef50_Q636X3 Phage integrase n=18 Tax=Bacillales RepID=Q636X3... 209 2e-52 UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostri... 209 2e-52 UniRef50_C4Z3W8 Integrase/recombinase XerC n=7 Tax=Clostridiales... 208 3e-52 UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepI... 207 4e-52 UniRef50_C0X7V2 Integrase family protein n=1 Tax=Enterococcus fa... 207 4e-52 UniRef50_B2V4P6 Phage integrase family protein n=9 Tax=root RepI... 207 5e-52 UniRef50_Q88SM0 Prophage Lp4 protein 1, integrase n=1 Tax=Lactob... 207 6e-52 UniRef50_Q0FT82 Phage integrase n=1 Tax=Roseovarius sp. HTCC2601... 207 7e-52 UniRef50_B9E9M6 Integrase n=12 Tax=Staphylococcaceae RepID=B9E9M... 207 7e-52 UniRef50_A7WY94 Integrase homolog n=25 Tax=Firmicutes RepID=A7WY... 207 7e-52 UniRef50_C7GI02 Site-specific recombinase, phage integrase famil... 207 8e-52 UniRef50_UPI0001C3746F phage integrase family site specific reco... 207 8e-52 UniRef50_A5ZQX5 Putative uncharacterized protein n=1 Tax=Ruminoc... 206 1e-51 UniRef50_C9CCW8 Site-specific recombinase n=1 Tax=Enterococcus f... 206 1e-51 UniRef50_A5KPC6 Putative uncharacterized protein n=3 Tax=Clostri... 206 1e-51 UniRef50_C6VKZ1 Prophage Lp4 protein 1, integrase n=1 Tax=Lactob... 205 2e-51 UniRef50_C4Z9N6 Integrase/recombinase, XerC/CodV family n=15 Tax... 205 3e-51 Sequences not found previously or not previously below threshold: UniRef50_C0QHJ7 Phage integrase family protein n=1 Tax=Desulfoba... 234 4e-60 UniRef50_D2SBK5 Integrase family protein n=1 Tax=Geodermatophilu... 234 5e-60 UniRef50_D2SF19 LigA n=1 Tax=Geodermatophilus obscurus DSM 43160... 227 5e-58 UniRef50_B5H9T3 TraSA integrase fusion protein n=4 Tax=Streptomy... 227 7e-58 UniRef50_C9R814 Integrase family protein n=2 Tax=Ammonifex degen... 226 2e-57 UniRef50_D1A578 Integrase family protein n=1 Tax=Thermomonospora... 219 2e-55 UniRef50_Q8ETV2 Integrase n=3 Tax=Bacilli RepID=Q8ETV2_OCEIH 218 3e-55 UniRef50_A0QET6 TraSA:integrase fusion protein n=1 Tax=Mycobacte... 214 3e-54 UniRef50_Q0REL9 Integrase (Recombinase) n=2 Tax=Frankia RepID=Q0... 214 6e-54 UniRef50_C5CAV2 Site-specific recombinase, integrase family n=1 ... 212 1e-53 UniRef50_Q88UJ5 Prophage Lp3 protein 1, integrase n=1 Tax=Lactob... 212 2e-53 UniRef50_A1SI41 Phage integrase family protein n=1 Tax=Nocardioi... 212 2e-53 UniRef50_C9XJT1 Integrase n=6 Tax=Clostridium difficile RepID=C9... 212 2e-53 UniRef50_UPI0001BCC5A1 phage integrase n=1 Tax=Aeromicrobium mar... 210 9e-53 UniRef50_Q0RPW7 Integrase n=1 Tax=Frankia alni ACN14a RepID=Q0RP... 210 9e-53 UniRef50_C4RQL8 Integrase n=2 Tax=root RepID=C4RQL8_9ACTO 209 1e-52 UniRef50_C2VI23 Site-specific recombinase, phage integrase n=3 T... 209 1e-52 UniRef50_A6NRR1 Putative uncharacterized protein n=1 Tax=Bactero... 209 1e-52 UniRef50_C9C7Z3 Phage integrase n=2 Tax=Bacilli RepID=C9C7Z3_ENTFC 209 2e-52 UniRef50_Q98MQ9 Bacteriophage integrase n=5 Tax=Rhizobiales RepI... 208 3e-52 UniRef50_UPI0001C375B8 hypothetical protein RflaF_20511 n=1 Tax=... 207 7e-52 UniRef50_C5WGZ4 Integrase n=18 Tax=root RepID=C5WGZ4_STRDG 207 8e-52 UniRef50_Q65KT3 Lambda integrase-like protein(Phage related) n=1... 206 1e-51 UniRef50_C0X0P7 Phage integrase family site specific recombinase... 206 1e-51 >UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Tax=Bacteria RepID=INTR_ECOLI Length = 411 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 411/411 (100%), Positives = 411/411 (100%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE Sbjct: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES Sbjct: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF Sbjct: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAW 240 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAW Sbjct: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAW 240 Query: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT Sbjct: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT Sbjct: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS Sbjct: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 >UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826473 Length = 431 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 172/414 (41%), Positives = 246/414 (59%), Gaps = 5/414 (1%) Query: 2 SKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEY 61 S PTGVE G +RIWF+++G R RE+L G T N K AG LRA + I +G F Y Sbjct: 4 SAYPTGVENHGGTLRIWFIYKGSRVRESL-GVPDTPKNRKVAGELRASVCFSIKTGSFNY 62 Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 +FP S + T EL + W ++K E++TN M + S + + I Sbjct: 63 AAQFPDSPNLRRFGMESKEITVLELANKWLELKRMEISTNAMSRYSSIARNMVPRIGGDR 122 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 +S + D+L R ELL G + ++ KGR+VRTV+NY+ + + FA SG++ Sbjct: 123 LVSAVTQEDLLFIRKELLTGYHVLKTGQKTPVKGRSVRTVNNYMRTMSGMFNFAADSGYV 182 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAW 240 PF G+ L+R R +PDPL++ EF ++ + Q +N+W AVY+G+RHGEL ALAW Sbjct: 183 KANPFNGISLLKRARTEPDPLTREEFIRMINACTHQQLKNMWSLAVYTGVRHGELVALAW 242 Query: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGI-RTVTLLQPALEALKEQYKLTGHHRKSEI 299 ED+DL+ G + +RRN T+ F PKT AG R + L+QPA++ LK Q ++T ++ +I Sbjct: 243 EDIDLKAGTMIIRRNHTLTKEFTLPKTEAGTDRIINLIQPAIDVLKSQAEMTRLGKQHQI 302 Query: 300 TFYHREYGRTEKQKLHFVFMPRVC--NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 REYGR+ FVF P++ N +Y+V S+ W +A++RAGIR R Y + Sbjct: 303 EVKLREYGRSVAHPCTFVFNPQIVSRNSLAGNHYAVGSINQSWESAMRRAGIRYRKAYQS 362 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT+ACW L AGANP FIA QMGH AQMVY +YG W+ + N +Q+ +LN +LS Sbjct: 363 RHTYACWSLAAGANPNFIAKQMGHTDAQMVYRVYGSWMAENNQDQVLILNQKLS 416 >UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z3D7_LISDA Length = 428 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 176/415 (42%), Positives = 246/415 (59%), Gaps = 4/415 (0%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 MS P G+E+RG+ IRI F F+GKRCRETL GW++T SNIKKAG LRA+IV EI G+F Sbjct: 1 MSMYPEGIEVRGKSIRITFYFKGKRCRETLTGWDVTPSNIKKAGRLRAVIVSEIACGKFN 60 Query: 61 YLRRFPQSSTGAKMV--TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 YL RFP S ++ V + + + + IK ELT +++ +T+S LKT ++ Sbjct: 61 YLERFPNSKNTLQISVQNPHVDCSLNDFIEHFLLIKSVELTESSIIRTRSGLKTCAKLLG 120 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 IS+I ++DI++ R +LL+G R GR+V+TV+ Y+ + SL ++AY++ Sbjct: 121 GERLISNITHADIMSMRLKLLNGSNFSPSPIRRTSNGRSVKTVNTYLTICSSLFKYAYRT 180 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES--EKGQSQNLWKFAVYSGLRHGELA 236 I T PF+GV +L+ + P+PL EF L+ + Q NLW AVY+GLRHGEL+ Sbjct: 181 EAIHTNPFDGVSRLRTVKTPPNPLEHDEFIRLINHPSIREQDVNLWTVAVYTGLRHGELS 240 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 ALAWED+DL K + V+R T F PKT +G RT+ LL PA EAL Q T + Sbjct: 241 ALAWEDIDLVKRTITVKRTATQQKRFRVPKTESGERTINLLAPAYEALVRQKACTFLYPS 300 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 + R+ +++ +VF + + K S + W K AGI RNPY Sbjct: 301 IAVEVESRQKRNHIQEQCTWVFRMTSYSAEAKGNISTKVISNMWRKCTKLAGIAYRNPYQ 360 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 TRHT+ACWLL +GANPAFIASQMGH MV +YG W+ N+ +IA + +L+ Sbjct: 361 TRHTYACWLLNSGANPAFIASQMGHSDMSMVISVYGAWMPSNNESEIAKIERQLN 415 >UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XGP6_9ENTR Length = 427 Score = 397 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 161/411 (39%), Positives = 247/411 (60%), Gaps = 6/411 (1%) Query: 3 KLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 K PTGVE+ G+ +RI F ++GKR RETL G T N K AG LR I ++I +G F+Y Sbjct: 4 KYPTGVEVHGKSLRISFTYKGKRVRETL-GIPDTPKNRKLAGELRTAICYKIKTGAFDYS 62 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 FP+S + + TFG + + W ++K E+ +T + KS + L I ++ Sbjct: 63 VEFPESKNCNEKSISNKNVTFGYVANKWVELKRIEVAVSTFEAYKSIVNVLFFFIDKNKM 122 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 I+ DIL+ RN++L T+ N R +K GR+V TV+NY+ +L + FA ++ +I Sbjct: 123 INLFNLEDILSVRNKMLTSPTIEPVN-RVSKIGRSVSTVNNYMKILNCIFCFAAENKYIE 181 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWE 241 T +K L+++R PDP++K EF L+ + + Q++N+ +VY+GLR GEL ALA+E Sbjct: 182 TNVLSSIKNLKKSRAVPDPITKEEFPRLLNATRNIQAKNMLIVSVYTGLRPGELCALAYE 241 Query: 242 DVDLEKGIVNVRRNLTILDMFGPPKTNAGI-RTVTLLQPALEALKEQYKLTGHHRKSEIT 300 D+D + + V+RN++ + F PKT + R + +L P E+L+EQ LT + Sbjct: 242 DIDFIERTITVKRNISNIGDFSLPKTPSSTDRVIHMLDPVYESLREQMSLTRMTSPEIVN 301 Query: 301 FYHREYGRTEKQKLHFVFMPRVC--NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 REYG+ + FVF P V NG + +YS W A +KR+G+R R Y TR Sbjct: 302 VEMREYGKYREDSCTFVFQPSVVARNGLETKHYSPGGFNGIWGALIKRSGVRHRKSYQTR 361 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 HT+ACW+L+AGANPAFIA+QMGH +A+M+Y++YG W+ + + +QIA++N Sbjct: 362 HTYACWMLSAGANPAFIATQMGHSSAKMIYDVYGAWMKENDKDQIAIMNRN 412 >UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteriaceae RepID=A8GE25_SERP5 Length = 428 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 163/416 (39%), Positives = 238/416 (57%), Gaps = 7/416 (1%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 M PTGVE G +RIWF+F+GKR RE L G T N K AG LR + +EI +G F Sbjct: 1 MKAYPTGVENHGGTLRIWFLFQGKRVRENL-GIPDTPKNRKAAGELRTSVCYEIKTGNFS 59 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Y +RFP S + R T ++ W +KE E++ T+ + S + Sbjct: 60 YEKRFPNS-RNVTINAARENITVNDIIKKWLNLKEMEVSKGTLYRYTSHCGVTASYLNPE 118 Query: 121 TPISHIRYSDILNYRNELLH--GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 I+ IR DIL R +L + + +S ++GR V TV++Y+ + ++ FA + Sbjct: 119 RKINEIRQEDILLARKRMLTEPQQPKIHEKRKSVRQGRAVPTVNSYMFCMRAIFDFAVSN 178 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAA 237 G+I+ PFEGV L++ R PDPL+K E+ ++ S Q +N+ A+ +GLRHGEL A Sbjct: 179 GYIANNPFEGVSPLKKQRPAPDPLTKEEYQRVIVSCPTQQMRNMITLAINTGLRHGELYA 238 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 LAWED+D + +++ RNL++ + F PKT+AG+RT+ L A+EA+K Q LT Sbjct: 239 LAWEDLDTQNWTISISRNLSLKEHFTLPKTDAGMRTIQLTTVAIEAIKSQMALTRLSNAH 298 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVC--NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 +T REYG+ F+F PR+ NG +YS + W +++AG++ R Y Sbjct: 299 RVTVNLREYGKKRTDDCTFIFSPRITSRNGSSADWYSPGAFNGAWKTILRKAGVKHRKSY 358 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 TRHTFACW L+ GANP F+A QMGH +AQM+Y +YG W+ + ND Q+ +LNA S Sbjct: 359 ETRHTFACWALSCGANPNFVAHQMGHSSAQMLYNVYGKWMTENNDHQVNILNASFS 414 >UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH Length = 412 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 174/412 (42%), Positives = 231/412 (56%), Gaps = 19/412 (4%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 MS LPTGVEI +RIWFM++GKR RE+LK T NIK A + R I H I +G+F Sbjct: 1 MSALPTGVEIHAGQLRIWFMYKGKRQRESLK-CPPTPKNIKLAASRRTAICHAIQTGQFI 59 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Y FP+S + + I T EL D W +K E+T T+K + ++K + + E+ Sbjct: 60 YKEWFPESKKANQYSDKKDI-TIKELFDRWLDLKVIEVTPATIKNYQQRVKQVYWHLPET 118 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 T +S + +L R + T + Y+ L + FA SG+ Sbjct: 119 TLVSEVTQEKLLELRKRFTET--------------CSPSTANTYMRTLKGIFSFAINSGY 164 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEK-GQSQNLWKFAVYSGLRHGELAALA 239 G+K+L+ + KP PLS+ EF ++E + Q N W AVY+GLRHGEL ALA Sbjct: 165 SDPALLNGIKELKTQKRKPQPLSEEEFQRVIEHCQHEQDANFWTVAVYTGLRHGELMALA 224 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 WED+DLE G + VRRNLT+ F PKT +G RTV LL PAL ALK Q K T + EI Sbjct: 225 WEDIDLENGTITVRRNLTLEGRFKLPKTISGERTVNLLNPALAALKAQMKWTFMLPELEI 284 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQ--KPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 REYG+ ++Q + VF P V + YY S+ +WN KRA + R PY T Sbjct: 285 DVLQREYGKLQRQFIRPVFSPSVTARYEVDNRYYHHVSIWEKWNMLCKRAKLTYRKPYQT 344 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 RHT+ACW+L+AGANP FIA QMGH +A+ VY+ YG W+ D Q+ MLNAR Sbjct: 345 RHTYACWMLSAGANPTFIAKQMGHSSAKEVYQTYGDWVGDHTKGQLDMLNAR 396 >UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio harveyi group RepID=A7MYL9_VIBHB Length = 411 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 169/412 (41%), Positives = 236/412 (57%), Gaps = 12/412 (2%) Query: 5 PTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRR 64 P GVEIRG+ IRI F +R RCRETLKGWE+T N+KKA LRA I+ EI+ G F+YL R Sbjct: 4 PEGVEIRGKSIRISFTYREMRCRETLKGWEVTKGNLKKASQLRASILSEISLGTFDYLSR 63 Query: 65 FPQSSTGAKMVTTR---VIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 FP S T T EL D + ++K+T + + ++ + + + I E Sbjct: 64 FPTSKKAQLFATPEQRGKNLTVRELFDDYIQLKKTTMASQSLYVLNNTARACCLFIGEER 123 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 IS+I D L + L +D+P N + R+ +T++N I L+ A +S FI Sbjct: 124 TISNITIMDALKCQ-------KLMVDSPTRNGRPRSAKTINNMIKLMRRCFDLAVKSKFI 176 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAW 240 PF V+ L +PDPL EF+ L+ES Q +N++ A+Y+G+R GEL ALAW Sbjct: 177 DDNPFLHVELLSGGSGEPDPLELEEFHQLIESTTNLQQRNIFTLAIYTGMRTGELCALAW 236 Query: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 EDVDLEKG + V RN+TI F PK RT+ LLQPAL ALK Q KLT +I Sbjct: 237 EDVDLEKGTIEVTRNVTIERKFTTPKNKKSERTIHLLQPALLALKSQRKLTMLGPVRDIL 296 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQK-PYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 + ++ + FVF+P NG++ Y ++ W+ A+KRAGIR R Y +RH Sbjct: 297 VEVKGSNTFRQESVQFVFIPEHRNGQETSETYKTTTYNRLWSRALKRAGIRHRCSYQSRH 356 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 T+ACWL+T GAN +FIA QMGH++ M+ +YG ++ + EQI LN ++ Sbjct: 357 TYACWLITKGANLSFIAEQMGHKSTMMLERVYGRFMKSHSHEQIEYLNGIMA 408 >UniRef50_P76168 Putative lambdoid prophage Qin defective integrase (Fragment) n=64 Tax=root RepID=INTQ_ECOLI Length = 385 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 156/372 (41%), Positives = 232/372 (62%), Gaps = 5/372 (1%) Query: 44 GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTM 103 G LR+ + + I +G F+Y ++FP S K R T EL + + +KETE+ ++ Sbjct: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 Query: 104 KKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 ++ +K + II E S I +L R ELL G + N + GR+ TV+N Sbjct: 61 NTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNN 120 Query: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLW 222 Y+ L ++ +F +G+++ PF+G+ L+ +R PDPLS+ EF L+++ + Q++NLW Sbjct: 121 YMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLW 180 Query: 223 KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGI-RTVTLLQPAL 281 +VY+G+R GEL AL WED+DL+ G + +RRNL D F PKT AG R + L++PA+ Sbjct: 181 CVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-DRFTVPKTQAGTNRVIHLIKPAI 239 Query: 282 EALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNG--KQKPYYSVSSLGAR 339 +AL+ Q LT ++ I + REYGRTEKQK FVF P V +++V S+ Sbjct: 240 DALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQM 299 Query: 340 WNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN 399 W+AA+KRAG+R R Y +RHT+ACW LTAGANPAFIA+QMGH AQMV+++YG W+ + N Sbjct: 300 WDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENN 359 Query: 400 DEQIAMLNARLS 411 + Q+A+LN +LS Sbjct: 360 NAQVALLNTQLS 371 >UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria mucosa ATCC 25996 RepID=UPI0001BC493F Length = 415 Score = 333 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 121/408 (29%), Positives = 187/408 (45%), Gaps = 49/408 (12%) Query: 2 SKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEY 61 ++PTGV IR R I+IWFM+RGKRC E+L + T +NI+ A LR + I G F+Y Sbjct: 4 KRIPTGVVIRDRSIKIWFMYRGKRCWESLP-LKPTTANIRHATKLREEVCTRIAIGVFDY 62 Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 FP S + T TF E+ + W +L+ +T+ + + L + + Sbjct: 63 AEFFPDSKRAEE---TERSPTFREMAEAWLATV-NQLSHSTLSRYRGMLNSHVLPKIGDM 118 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 I I+YS + L + +T +N ++ A + G I Sbjct: 119 SIDRIQYSTLAGLLATL----------------DCSAKTRNNIATVIRQPFVLALRDGRI 162 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ--SQNLWKFAVYSGLRHGELAALA 239 P + + + + PDP + E A++ K + N ++ A +SG+R EL AL Sbjct: 163 KDNPAQHLANAKVQKEPPDPFTLEEAEAILGYLKNEPVFHNYFELAFFSGMRTSELIALT 222 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 W+D+D ++ V V + ++ KT+ R + L ALEAL+ Q++ TG Sbjct: 223 WQDIDFQRQCVCVNKA-SVAGKLKSTKTH-SYRDIELNSRALEALRRQWQRTGL------ 274 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 +VF+ P+ + W A+K AG+R R PY+TRH Sbjct: 275 -------------ASGYVFINPK---TGSPFENDKVPWRPWQHAIKIAGVRYRKPYNTRH 318 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID--DMNDEQIAM 405 TFA L AGANP ++A QMGH T +M+ E Y WID D E+ + Sbjct: 319 TFATLNLMAGANPMWVARQMGHSTMKMLLENYSRWIDLADKQREKSKI 366 >UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID=A8T0M8_9VIBR Length = 407 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 128/414 (30%), Positives = 200/414 (48%), Gaps = 26/414 (6%) Query: 3 KLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 KLP GVEI G+ +R+ F+++GKR RETL G T N++ A R I++EI G F Y Sbjct: 8 KLPAGVEIHGKSLRLDFVYKGKRRRETL-GLSPTKQNVRFAAQKRETIMYEIKIGIFRYA 66 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 FP S + +R TFGE+ D + ++K+ +L ++T KK S K + + Sbjct: 67 AHFPDSPYATEQSQSR---TFGEMVDKYLQLKQADLRSSTYKKYVSLFKITKNAYGANRS 123 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 S + + R L+ KGR RT++ Y + + + ++ G++ Sbjct: 124 CSTLSPESVSELRALLI--------------KGRGARTLNTYFRAINTFFGWLHKMGYVD 169 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAWE 241 E + ++ +P + E N +++ + Q +N+ Y+GLR GE+ LAWE Sbjct: 170 RNFSEFMPSVKTPERNINPFTIDEINKALDACMQEQHKNMITLLAYTGLRTGEICGLAWE 229 Query: 242 DVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 DVD E ++ +RR PKT+ RTV L+ PALEAL+ Q KL+ H+ + E Sbjct: 230 DVDFENKVLTIRRATFESRGLKTPKTDR-ERTVDLMPPALEALQAQKKLSSHYPQKEHEV 288 Query: 302 YHREYGRTEKQKLHFVFMPRVCNG----KQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 + + FVF P+ Y+S ++ W RAGI RN Y Sbjct: 289 ELAD-KTIRLDNIRFVFNPKATENLNAKTPYDYFSKTAPNKMWRNICIRAGIPYRNVYQL 347 Query: 358 RHTFACWLLT-AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHT+A W+L+ A N A++A QMGH M+ +YG W+ + N + L Sbjct: 348 RHTYASWMLSYANVNIAYLAQQMGHSNFLMIASVYGKWMKNKNASESEKAWEAL 401 >UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria RepID=A4AD26_9GAMM Length = 399 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 100/410 (24%), Positives = 165/410 (40%), Gaps = 41/410 (10%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 V RG + F +RG RCRE E +N K+ ++ + EI G F+Y FP Sbjct: 3 SVNARGNKLFFDFRYRGVRCREYT-HLEDKPANRKRMKDILQRVESEIVLGTFDYAAYFP 61 Query: 67 QSSTGAKMVT--------TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 +S A+ + TF D W + + + + L I Sbjct: 62 ESPNAARFADHDKQIEQRSAKTPTFKAFADQWMEENRIGWKPSYINTLEHSLSKHVIPAF 121 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 S P+S I DIL +RN+L + G + ++ + L ++R A Sbjct: 122 GSVPMSAISKEDILAFRNQLARIPR------KDGSVGLSAARINTVMVPLRQIMREA-SE 174 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAAL 238 F P++G+K L+ R K +P + E A+++ + ++G+R GE+ L Sbjct: 175 RFGFDNPYQGIKLLKVPRTKVEPFTLDEVKAVLDGVREDFHAYMTVRFFTGMRTGEIHGL 234 Query: 239 AWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 W+ +D ++ ++ VR + + KT R + + ALK Q+K TG Sbjct: 235 KWKYIDFKQRMILVRESY-VAGAMTDTKTEESARDIPMSDEVYAALKAQHKRTG------ 287 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 KL VF C G +P + W + I +R PY TR Sbjct: 288 --------------KLDLVF----CTGSGEPLSINNVCKRVWYPLLALLKIPKRPPYQTR 329 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 HT A L AG NP ++A +GH + + ++ Y WI ++ + + A Sbjct: 330 HTAATLWLAAGENPLWVAQILGHSDSAITHKRYARWIPNLTRQDGSAFAA 379 >UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D584_LARHH Length = 416 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 125/415 (30%), Positives = 188/415 (45%), Gaps = 47/415 (11%) Query: 6 TGVE-IRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRR 64 TG+ + I I F F G+RCRE +K + T +N+K+A RA I+ I +G F Y Sbjct: 10 TGIRPVSESSIEIAFTFAGERCRERIK-LKPTPANLKRAAQHRAAILAAIENGTFVYAVT 68 Query: 65 FPQSSTGAKMVTTRVIK---TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 FP S T V K T W K E L ++T+ K+ + + Sbjct: 69 FPHSKKAVLAKRTPVAKYGKTLDAWMSEWLKRCERYLKSSTLHDYKTIAWRQLSPVFGNH 128 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 I I+ SDI + + L + + + N +++ + L A I Sbjct: 129 QIGDIKRSDIRAWCDGLT----------------CSNKRIANILSVFRASLTAAMDDELI 172 Query: 182 STKPFEGVKKLQRNRIK---PDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAAL 238 T P G +R +K DP + E A++E+ N+ +FA ++GLR EL AL Sbjct: 173 DTNPLSGWTYRRREEVKEDDIDPFTPDEQTAILEALPEAGCNMIRFAFWTGLRTSELVAL 232 Query: 239 AWEDVDLEKGIVNVRRNLT-ILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 W+D+D G V++ + LT PKT A R VTLLQPALEAL Q +T Sbjct: 233 EWKDIDWVGGKVSISKALTQRATKAETPKTRASRRFVTLLQPALEALMAQKAVT------ 286 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA-RWNAAVKRAGIRRRNPYH 356 + E+GR +P+ ++ W A++RAG+R R PY Sbjct: 287 ----FFSEHGRVWIDP-----------RTGEPWTGDQAIRKTLWTPALRRAGVRYRRPYQ 331 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 TRHTFA +L+AG +P ++A+QMGH + M+ +YG WI + ++ S Sbjct: 332 TRHTFASMMLSAGESPVWVANQMGHASWTMIARVYGRWIPNGDNGDGQKAVKAFS 386 >UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobacteria RepID=A5WDD8_PSYWF Length = 401 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 99/414 (23%), Positives = 184/414 (44%), Gaps = 40/414 (9%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 + RG+ + + F + G RCRET T N KK + + EI G F Y + F Sbjct: 2 ASIRSRGKKLFVDFRYLGVRCRETTNLI-DTPENRKKLQKIIERMEAEIVLGTFNYAQYF 60 Query: 66 PQSSTGAKMVT--------TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 P+S +KM+ + +F + ++W KE E +K + + + Sbjct: 61 PKSDKASKMMALNDRKECINTSMPSFKQFAELWFSEKEIEWRDTYKRKIREIIDMYLLPE 120 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 + PI I+ +++L +R+ L + KK + +++ + L +L+ A + Sbjct: 121 FQGRPIDTIKKTEVLAFRSALAKVTRGKV------KKPLSAARINSIMVPLGMILKEASK 174 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAA 237 + P+E +K L+ R P + E + + +N + ++G+R E+ Sbjct: 175 -RYKFENPYEDIKSLKEPRTSIQPFTLDEVWKFINWVREDYRNYYLVRFFTGMRTSEIDG 233 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 L WE++D ++ + + + L + PPKT R + + +ALKEQ+K+T +++S Sbjct: 234 LTWENIDFDRREIVINQAL-VKGKIVPPKTQESYRAIQMSPWVYDALKEQHKVT--YKRS 290 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 E F C+ +P + W+ +K G+++RN Y T Sbjct: 291 EYVF---------------------CSHTGEPLDYNNVNKRVWHPTLKALGLKKRNAYQT 329 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A L AG +P +IA QMGH T +M++ Y ++ +M + + A ++ Sbjct: 330 RHTAATLWLAAGESPEWIAYQMGHSTTKMLFNTYSRYVPNMTRQDGSAFEALVN 383 >UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobacteria RepID=A9KZM7_SHEB9 Length = 431 Score = 310 bits (795), Expect = 5e-83, Method: Composition-based stats. Identities = 119/416 (28%), Positives = 198/416 (47%), Gaps = 24/416 (5%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGW-EITNSNIKKAGNLRALIVHEINSGEF 59 + KLP GVEI +RI FMF GKR RE LKG+ +IT S IK A N R I+ EI F Sbjct: 8 VEKLPVGVEINFNTVRIVFMFNGKRYREPLKGYSKITKSVIKYAENKRNTILTEIAENRF 67 Query: 60 EYLRRFPQSSTGAKMVTTRVIK-TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 +Y+ FP+S + + + + W KI++ +T K +S+ K + Sbjct: 68 DYIAHFPESIKAMEFAGILIERRNVANGVNHWLKIQDVTKAKSTSKNYRSKSKHVINYFG 127 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 IS I S +L ++ +L K G + +TV++ ++ + A++ Sbjct: 128 GDQLISEISRSHLLMFQANML-------------KAGLSPKTVNDVFTIVRGVWYVAFED 174 Query: 179 GFISTKPFEGVKKLQRNRIK--PDPLSKTEFNALM--ESEKGQSQNLWKFAVYSGLRHGE 234 G I + P + + ++R+ ++ DP ++ E + ++ + N+ F ++GL E Sbjct: 175 GIIRSNPLDRISNIERDTLEETADPFTRDELERIAADDTSRRGDINMIMFCCWTGLSLSE 234 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 + ALAWED+D VN+RR + + PK +R + L+ PA E L EQ + T Sbjct: 235 VIALAWEDIDTVNWTVNIRRARVLTQ-YKVPKERGRVRVIELIDPAKEWLIEQMQHTMML 293 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 E+ R+ T+ + + FVF+ NGK + S+ + ++R +R R P Sbjct: 294 PTIELEVKQRDNITTKNENIRFVFL----NGKSGLPWYDHSVRRWFTGILERTKLRHRGP 349 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHTFA LL+ ++A Q+GH M+ + YG WI + + ++ L Sbjct: 350 NQCRHTFASQLLSNYVPLEWVARQLGHSDTTMIKKHYGKWIPKDSQKMANRVSEML 405 >UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8HM00_BURPS Length = 411 Score = 310 bits (795), Expect = 5e-83, Method: Composition-based stats. Identities = 125/418 (29%), Positives = 193/418 (46%), Gaps = 62/418 (14%) Query: 3 KLPTGVEIR----GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGE 58 +LPTG+E+R G +R+ F +RG+ CRETLK E T NI+ A LR I+ +I G Sbjct: 6 RLPTGIEVRTGARGASLRVRFYYRGEECRETLK-MEPTPKNIQYADRLRGEILRKIEMGT 64 Query: 59 FEYLRRFPQSSTGAKMVTTRVIK-TFGELCDIWT-----KIKETELTTNTMKKTKSQLKT 112 F Y FP+S A + T GE D + + +T ++ +T++ + + Sbjct: 65 FNYGEYFPESKRAATPRAASPSEVTVGERLDDFMTQARKAVAKTRMSPSTLEGYRKVVDG 124 Query: 113 LRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLL 172 + + +R +D+ + ++L T++T N + L S+L Sbjct: 125 RLRPRWGAVRLVDVRPADLRKWISDL----------------DVTLKTARNILGPLGSVL 168 Query: 173 RFAYQSGFISTKPFEGV-------KKLQRNRIKPDPLSKTEFNALMESEK-----GQSQN 220 A I P + K + + + DP S E A++ + G ++N Sbjct: 169 ADALNDELIDENPLTKIDVRKLLSKTTRPSDYEVDPFSIDEIRAILAAADELYPGGAARN 228 Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPA 280 L++FA +SG+R EL AL W VDL G+V V RN ++ KT AG+R V LL A Sbjct: 229 LFQFAFWSGMRTSELIALDWLHVDLNAGVVRV-RNAQVVGTMKTTKTKAGLRDVLLLPSA 287 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG-AR 339 AL+ Q ++T + + VF V +P+ + Sbjct: 288 RAALEAQREVT------------------RGMEHNRVF---VVPWHGRPWSGDKQIRVNC 326 Query: 340 WNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 W +K+A +R RNPY TRHTFA LL+ G NP ++A QMGH +M+ + YG WI D Sbjct: 327 WTYVLKKAEVRYRNPYQTRHTFASMLLSRGENPLWVAQQMGHVDTEMITKTYGKWIPD 384 >UniRef50_C6DJ77 Integrase family protein n=4 Tax=Enterobacteriaceae RepID=C6DJ77_PECCP Length = 255 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 177/253 (69%), Positives = 219/253 (86%) Query: 159 RTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS 218 RTVDNYIALLCSLLRFA++SGFIS +PFEG+KKLQ++R +PDPL K EF+ L+ S GQS Sbjct: 2 RTVDNYIALLCSLLRFAHRSGFISGRPFEGIKKLQKSRPRPDPLLKHEFDQLIGSLSGQS 61 Query: 219 QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQ 278 +NLW+ AVY+GLRHGELAALAWED+DL+ G++++ RNLTIL FGPPKT AGIRTVTLL+ Sbjct: 62 KNLWQLAVYTGLRHGELAALAWEDIDLDAGVIHISRNLTILGHFGPPKTQAGIRTVTLLK 121 Query: 279 PALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA 338 PALEAL+ Q K TG+ R ++I ++HREYG TE Q+L FVF+PRV NG+QK YS ++G+ Sbjct: 122 PALEALQSQMKTTGNKRTNDIVYHHREYGLTEIQRLRFVFLPRVRNGEQKISYSCGTMGS 181 Query: 339 RWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 WN AVKR+GIRRRNPYHTRHT+ACWLL+AGANP+FIA+QMGHE AQMVYEIYG WI+DM Sbjct: 182 LWNTAVKRSGIRRRNPYHTRHTYACWLLSAGANPSFIANQMGHENAQMVYEIYGKWIEDM 241 Query: 399 NDEQIAMLNARLS 411 N++Q+ MLN +L+ Sbjct: 242 NEDQVGMLNRKLA 254 >UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1ZMG0_PHOAS Length = 391 Score = 303 bits (776), Expect = 9e-81, Method: Composition-based stats. Identities = 100/419 (23%), Positives = 168/419 (40%), Gaps = 46/419 (10%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 + R + I F +RG RCRE + T N K+ L I EI G FEY + F Sbjct: 2 ASINTRNGKLVIDFRYRGLRCREQTQ-LADTPHNRKRLTLLANKIEAEITLGCFEYQKYF 60 Query: 66 PQSSTGAKMV-------------TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKT 112 QS K E DIW K+ E + ++ Sbjct: 61 SQSKLCEKFRAMEHRERASSQYYNAPYSPNLAEFADIWLAEKKIEWSKGHYIDVSGVIEK 120 Query: 113 LRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLL 172 + + IS I IL +R+ L P + + +++ + L LL Sbjct: 121 YLLPAFGNQKISSITKQKILKFRSILSQV-------PGRKGEYLSSSRINHIMTPLRQLL 173 Query: 173 RFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRH 232 A + P++ +K L+ +R DP E + + + + + ++G+R Sbjct: 174 NEA-ADRYDFNSPWKNIKALKVSRTVIDPFHLDEVESFLNAVPDAYKTYYTTRFFTGMRT 232 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 GE+ L W+D+DL + V++ L+ + KT + R + L+ ++ L++ Sbjct: 233 GEIDGLQWKDIDLVNKTIKVKQALSR-NELKELKTESSYRDIDLIDRVIDVLQKHK---- 287 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 R++ FVF+ N K KP+ W + AG+R R Sbjct: 288 ---------------RSKYTTSTFVFI----NSKGKPFCYPVVSRTIWYPTLDAAGLRHR 328 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 NPY TRHT+A LL +G +P +IA QMGH T M++ +Y ++ ++ + L+ Sbjct: 329 NPYQTRHTYATLLLASGESPEWIAKQMGHSTTTMLFRVYSRFVPNLTRRDGSAFEKFLN 387 >UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales RepID=C5T6H4_ACIDE Length = 501 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 100/438 (22%), Positives = 172/438 (39%), Gaps = 64/438 (14%) Query: 6 TGVEIR--GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + R + F F+G RCRE T +N KK + A I EI +G F Y Sbjct: 2 PSIRSRADNGLLFFDFRFQGDRCREQT-LLSDTPANRKKLEKVLAKIEAEIAAGTFVYAN 60 Query: 64 RFPQSSTGAKMV------------------------------TTRVIKTFGELCDIWTKI 93 FP S A++ F W + Sbjct: 61 YFPNSKALARLEKAAGQAVQIAVAPVGVEAQHTAGPLKVEAEPASPTPPFSTFALQWVEE 120 Query: 94 KETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNK 153 + E + ++ S L I + +S I SDIL +R L R +K Sbjct: 121 HKIEWRRSHLRSLMSTLNGRLIPHFKEKAVSQITKSDILTFRATLAKV------KGRGDK 174 Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES 213 +G + + ++ I L ++ A F T P GVK+L+ + DP S + +++ + Sbjct: 175 EGLSPKRINEIIGTLGQIMDEA-ADRFEFTSPMTGVKRLRVRKTDVDPFSLADVQSILTT 233 Query: 214 EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRT 273 + ++ + ++G+R GE+ L W VD E+ ++ VR +L KT+ R Sbjct: 234 VRADYRDYFTTRFFTGMRTGEVHGLKWRYVDFERRLILVRETF-VLGEDEYTKTDGSQRD 292 Query: 274 VTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSV 333 + + QP +AL Q + TG +VF CN +P + Sbjct: 293 IQMSQPVFDALLRQREATGK-------------------LSDYVF----CNMAGQPLDNK 329 Query: 334 SSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGM 393 + W ++ G+ R PY RHT A L +G P +IA Q+GH + +M++ +Y Sbjct: 330 NFSDRVWYPLLRHLGLTERRPYQMRHTAATLWLASGEAPEWIARQLGHTSTEMLFRVYSR 389 Query: 394 WIDDMNDEQIAMLNARLS 411 ++ ++ + + + L+ Sbjct: 390 YVPNLTRQDGSAMERLLA 407 >UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MG53_9PROT Length = 361 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 112/397 (28%), Positives = 176/397 (44%), Gaps = 40/397 (10%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 M G+ IRG +I F ++G RCRE++ T + K+ I +EI +G F+ Sbjct: 1 MDARQRGITIRGNSAQISFTYQGVRCRESIP-IPPTKTAQKELALKLQSIKYEIKTGTFD 59 Query: 61 YLRRFPQSSTGAKMVTTRVIK-TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 Y R FP S + R T E W + + +L +T++ S + I Sbjct: 60 YNRHFPYSKKAKEFRKNRPDLYTIKEALISWLQRNQAKLQLSTLQDYNSAIYHHLIPTFG 119 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + IS + S + + +EL + + N + L + Y Sbjct: 120 NLTISELTASKVKEWLSEL----------------PCSNKRKSNILTPLRQMFEELYLDE 163 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALA 239 I P VK L +P+P ++ E ++ GQ++NL +FA YSGLR EL AL Sbjct: 164 IIDKNPLSRVKNLPNKTREPEPFTQEEIIKILNELTGQAKNLIQFAFYSGLRTSELIALC 223 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 W++V+ E+ + + + + KT +G R VTL A EAL Q TG ++++I Sbjct: 224 WKNVEFEQNRIFI-KQAHVRGQLKDTKTKSGKREVTLQPQAKEALLNQQAFTG--KQNQI 280 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 F++ + + K W A+K+AGI+ RNPY TRH Sbjct: 281 VFHNPKTKQPWKND-------------------QPIRKNVWIPALKKAGIKYRNPYQTRH 321 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID 396 TFA LL+ G ++A QMGH+ M+ ++YG WI Sbjct: 322 TFASMLLSRGEKLLWVAQQMGHKDWGMIIKVYGRWIP 358 >UniRef50_B0KSD4 Integrase family protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KSD4_PSEPG Length = 417 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 131/409 (32%), Positives = 196/409 (47%), Gaps = 20/409 (4%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 TG+EI G +RI FM+R RCRE+L G +T +NIK A LRA I+HEI G FEY R F Sbjct: 18 TGIEIHGGNLRIVFMWRRIRCRESL-GLPVTKANIKHAALLRAAILHEIKLGTFEYGRHF 76 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISH 125 P S + + L + + +K ++T T +K + ++ Sbjct: 77 PNSKHATNYSNAKDER-LEALAERYKPLKAIDITPMTEEKYAYAIDICVALVGGDRLAGI 135 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 + DI R L+ R T ++Y+A L + + + Sbjct: 136 LLPEDIHVLRARLIET--------------RAPSTANHYLATFAGFLTWCESNNYCMAGL 181 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALME--SEKGQSQNLWKFAVYSGLRHGELAALAWEDV 243 + + +PDPL+ EF+ L+ Q AVY+GLR GEL ALA ED+ Sbjct: 182 AGACTRFAMSDKEPDPLTHDEFDLLISNGCLHPQDAAAITLAVYTGLRPGELCALAVEDI 241 Query: 244 DLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 +L+ G + + R +T F PKT RTV L++PALEA + ++ +H K +I Y Sbjct: 242 NLQAGKIEITRAITADGSFKTPKT-GKPRTVLLMEPALEACRTLLEIVMNHPKRDIRVYQ 300 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQ-KPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 + E + + ++ ++ +W A +RAGIR R PY TRHT+A Sbjct: 301 NRHEWREISVTPLLSPSTQARKRGINEWFVSTAWNTKWAAIQRRAGIRPRRPYQTRHTYA 360 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 CW LTA N AFIA QMGH+ M+ E+Y W+D +DE++ + +S Sbjct: 361 CWCLTARGNLAFIAKQMGHKDFTMLVEVYAKWMDSESDEELTRIWEGIS 409 >UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanella RepID=A3D4Z5_SHEB5 Length = 392 Score = 296 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 95/412 (23%), Positives = 171/412 (41%), Gaps = 42/412 (10%) Query: 8 VEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 V R + + F ++G RCRE T +N +K L ++ ++ +G F+Y FP Sbjct: 4 VNSRDGKLYLDFRYKGVRCREQTS-LADTPANRQKLNKLLLMLEQQMKAGSFDYRHHFPN 62 Query: 68 SST---------GAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 S ++ F ++W K E + ++ + L+ I Sbjct: 63 SPKVEHFTQLAKLSQFHAAGGRMLFSAFANLWLDEKRVEWRASQIETVEGILRCHLIPAM 122 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 + I+ I DIL R L + L + + +++ + L +L A + Sbjct: 123 GTKMIATICKQDILGLRLSLCEVDAL-------TNRSLSASRINHIMTYLRLILNEAAE- 174 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAAL 238 F P+ +K L R P S E ++ES + + + ++G+R GE+ L Sbjct: 175 RFGFQTPWRNIKALPMPRTDIQPFSLVEVYRIIESVRDDFRPYYTVRFFTGMRTGEIDGL 234 Query: 239 AWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 WE++D ++++R++L + G KT++ R + + QP EAL+ Q +LT K Sbjct: 235 TWENIDFTNRLIHIRQSL-VRGSLGLTKTSSSDRAIAMNQPVYEALQAQSELTKIRGK-- 291 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 FVF CN + + W ++ + +RNPY TR Sbjct: 292 -----------------FVF----CNRRGDALSHQNVTKRVWYPLLESLALEKRNPYQTR 330 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 HT A L AG +P +IA Q+GH M++ +Y ++ ++ + A + Sbjct: 331 HTAATLWLAAGESPEWIARQLGHANTGMLFRVYSRYVPNLLGQDGAAFERLI 382 >UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 RepID=A3JCU8_9ALTE Length = 408 Score = 294 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 96/415 (23%), Positives = 169/415 (40%), Gaps = 49/415 (11%) Query: 13 RYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGA 72 + + FM RG RCRE T +N K+ L + +I G F Y +FP S Sbjct: 11 GKLYLDFMCRGHRCREQTALL-DTLANRKRVEALLQKVEAKILLGAFNYAEQFPDSRNLN 69 Query: 73 KM-----------------VTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRI 115 K+ V + D W + + + ++ + S L + Sbjct: 70 KLKNDGSGAGINDEGADPEVNAAQTPYVADFADQWFQESKIQWRSSHTRNVVSILDSSLK 129 Query: 116 IICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFA 175 ++T ++ I +DIL R ++ +T+++++ +L ++ A Sbjct: 130 PAFKNTRMAEITKADILAARTKMAKRRGRGASGL------MAPKTINSHLTILRMIMTEA 183 Query: 176 YQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGEL 235 F P+ +K L+ R+ +P S E + + + +N ++ Y+G+R GE+ Sbjct: 184 -SERFEFDNPYRNIKPLKLQRVHIEPFSLAEVERICKYVREDYRNYYQLRFYTGMRTGEI 242 Query: 236 AALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 L W +VD EK + VR L I KT+ R + + P EALK Q+ G Sbjct: 243 DGLKWANVDFEKQEILVRETL-IHGKTEYTKTDGSQREIPMFGPVYEALKAQHAAIGKLS 301 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 K FVF CN + +P + W ++ + +R PY Sbjct: 302 K-------------------FVF----CNREGQPLDHNNVTKRVWYPLLEALKLTKRRPY 338 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 TRHT A LL +G NP ++A +GH + +M++++Y +I ++ + L Sbjct: 339 QTRHTAATLLLASGENPEWVARVLGHSSTEMLFKVYSRFIPNLTRMDGSAFERLL 393 >UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q12GK7_POLSJ Length = 471 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 92/417 (22%), Positives = 166/417 (39%), Gaps = 50/417 (11%) Query: 13 RYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF------- 65 + + F + G+R RE +N K+ I +I G F+Y + F Sbjct: 11 GTLFMDFRYAGQRLREYT-MLPDMPANRKRLQKALDRIETDIALGTFDYEKTFGKPLPQP 69 Query: 66 -PQSSTGAKMVTTRVI----------KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLR 114 P++ G+ T R FGE W E + K L Sbjct: 70 EPKTKDGSVDRTARSDGLPVLSRNGTPLFGEFAQQWFTEVEVSWRRSYRITQKGALDKYL 129 Query: 115 IIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRF 174 + + HI +D+L +R L T SN++ V+ + L +L Sbjct: 130 LPFFGDKEVGHITKADVLAFRASLAKVTTRKSQGTLSNRR------VNAVMKPLRQILNE 183 Query: 175 AYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGE 234 A F F +K L+ R P + E ++ + + +N + ++G+R GE Sbjct: 184 A-ADRFEFNSAFRNIKPLKMKRSDVQPFTLDEVELILNTVRVDYRNYFNVRFFTGMRTGE 242 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 L W+ VD E+ ++ VR ++ +L+ KT+ +R + + Q +ALK QY+ G Sbjct: 243 AHGLKWKYVDFERRLILVRESI-VLNEEDELKTDGSVRDIHMSQVVYDALKAQYQAAG-- 299 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 + +VF C+ +P + + L WN ++ G+ R Sbjct: 300 -----------------EFSEYVF----CSRSGQPINNQNFLNRVWNPLLRHLGLEHRRA 338 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 Y RHT A L +G P +IA Q+GH + +M++ +Y ++ ++ + + + L+ Sbjct: 339 YQMRHTAATLWLASGEAPEWIARQLGHTSTEMLFRVYSRYVPNLTRQDGSAMERLLA 395 >UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFZ6_TOLAT Length = 394 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 94/414 (22%), Positives = 172/414 (41%), Gaps = 38/414 (9%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 T V ++ + + F F+G+RCRE G T N +K + +I G+F + + F Sbjct: 2 TSVFVQNDILYLDFHFKGQRCRERT-GLPDTEFNRRKLEKFCKRMDAQITLGQFNFCKTF 60 Query: 66 PQSSTGA--------KMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 P SS + + +F E + W + K+ E T+ + ++ L + Sbjct: 61 PNSSQCEYFHKIAHREELLKAGCPSFAEFAETWYQEKQVEWRTSQRETIRNILDIHLLPS 120 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 P++HI ++IL++RN + + K + V++ + L +L A Sbjct: 121 FGLMPVNHIGKTEILSFRNYVTQLKGR-------GDKQISASRVNHIMTPLRMILNEA-S 172 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAA 237 F ++ +K ++ R PL+ E L+ + + + ++GLR E+ Sbjct: 173 DRFDFPAVWKQIKSMKVPRSDVMPLTLAEIERLLLVVRKDFKPYYTVRFFTGLRSSEIHG 232 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 L W VD E+ + V + ++ KT+ R V + EAL QYK++G +R Sbjct: 233 LTWRHVDFERCQILVYQAYVRGELIS-TKTDGSYREVQMSLRVYEALLAQYKMSGQNRSI 291 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 + FVF C+ + W + G+ +R PY + Sbjct: 292 D----------------DFVF----CSSVGTALEDRNVANRVWYPLLALLGLEKRKPYQS 331 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A L++G +P +IA Q+GH + M++ +Y ++ +M LS Sbjct: 332 RHTTATLWLSSGESPEWIARQLGHVSTNMLFRVYSRYVPNMTGRDGTAFEQMLS 385 >UniRef50_C4TVA5 Bacteriophage integrase n=3 Tax=Enterobacteriaceae RepID=C4TVA5_YERKR Length = 396 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 112/411 (27%), Positives = 182/411 (44%), Gaps = 56/411 (13%) Query: 2 SKLPTGVEIR----GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSG 57 +KLP G+ +R G+ I I F ++G +CRE L E+T NIK A L I + I G Sbjct: 7 AKLPRGITVRSHKTGQTINITFTYKGVKCREPLSNIEVTPKNIKYAERLLGEIHNRIERG 66 Query: 58 EFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE-TELTTNTMKKTKSQLKTLRII 116 F Y +FP+S + K + D + I E +L+ T+ K L L Sbjct: 67 TFNYADQFPRSVRLNVFGNNQSSKHIKKYLDEYISICESRKLSPATIAGYKKCLSALSS- 125 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 +S + + + N+ + ++T+ N ++ L S + A Sbjct: 126 -LHEVNVSDLTPAIVKNWIQ----------------GQKVALKTIRNRLSFLGSAIDEAV 168 Query: 177 QSGFISTKPFEGVKKLQ--------RNRIKPDPLSKTEFNALME-SEKGQSQNLWKFAVY 227 G + P V + + DPLS E A++ + Q +NL++FA++ Sbjct: 169 TDGLLPANPVSLVSASRYQGEDVRSESEYVVDPLSPDEAKAILSTAMNAQWENLFRFALH 228 Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQ 287 +G+R EL A+ W+D+DL +V ++ + KT AG R + L AL A+K Q Sbjct: 229 TGMRSSELCAIRWQDLDLVGNTAHV-ITASVEGVIKGTKTKAGRRKIELDSDALLAVKNQ 287 Query: 288 YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKR 346 T K +VF N + + ++ + W +KR Sbjct: 288 KPFTFMLNK-------------------YVFHDPKTN---EAWTGADAIRKKAWIPTLKR 325 Query: 347 AGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 AG+R RNPY TRHTFA ++ GAN ++A QMGH+ +M++ YG ++ + Sbjct: 326 AGVRYRNPYQTRHTFATMHISQGANLFWLAGQMGHKGPEMLFRHYGSFLKE 376 >UniRef50_Q1QXU7 Phage integrase n=4 Tax=root RepID=Q1QXU7_CHRSD Length = 388 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 122/411 (29%), Positives = 196/411 (47%), Gaps = 29/411 (7%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + GVE+RG +R++F ++G+ CRE L G + T NI+ A L +I +EI++G F+Y R Sbjct: 1 MADGVEVRGNTVRVYFRWQGELCREPLPG-KATERNIEHARRLVTIINYEIDAGTFDYAR 59 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI 123 FP+S + TFG D+W IK+ EL ++ + S+ +T + Sbjct: 60 HFPESRRLHE-------STFGFYLDLWLAIKKNELAYSSYRGIASKAETHVRPRWGNEQA 112 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 I + ++ ++ + L +T+ ++++ R + Sbjct: 113 DDIDHIELQDWIQKDLATH-------------LANKTIKEVVSIMRQTFRLYATRNKKAF 159 Query: 184 KPFEGVKKLQRNRIKPDPLSKTEFNALMES--EKGQSQNLWKFAVYSGLRHGELAALAWE 241 P G+ + PDP K E ++E+ ++ Q NL KFA+Y G R E ALAWE Sbjct: 160 DPTLGINIRLPDDEDPDPFEKAEIRKILETPTKRVQELNLMKFAMYDGPRISEAQALAWE 219 Query: 242 DV-DLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 DV D+EKGI+ RR + + F KT R LL+PA EAL+EQ+ LTG+ Sbjct: 220 DVLDVEKGIIRYRRAV-VRGRFKVTKTKRSTRVHHLLKPAREALQEQFALTGNLPAQTYQ 278 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 R+ ++KL VF+ + KP+Y + W +++AG+R R P RHT Sbjct: 279 VVDRDNRTVRQEKLRLVFLNSLS---GKPFYENAIRQRFWKTHLEKAGVRYRGPNQCRHT 335 Query: 361 FACWLLTAG-ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 F +L+ G +IA+ +GH + M+ YG WI + M+ L Sbjct: 336 FISQMLSLGVVPLHWIANHVGHSSITMIQRRYGKWIHADGQDVPTMIEKLL 386 >UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DR3_THICR Length = 433 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 96/414 (23%), Positives = 161/414 (38%), Gaps = 46/414 (11%) Query: 8 VEIR--GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 + +R + F + RCRE T N KK + I EI G FEY + F Sbjct: 4 IRVRRETNTLYFDFSYLKLRCREQTT-LHDTKINRKKLETILERINAEITLGTFEYGKYF 62 Query: 66 PQSSTGAKMVTTRV--------IKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 P SS AK+ F + + W E T +S L I Sbjct: 63 PNSSMLAKIEKATAKLVPGYTKTPLFKDFVEEWFSEMEPTWRKATADGYRSYLDKRLIPH 122 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 +S I ++IL YR + L + +T++ +I L ++ A Sbjct: 123 FGEMEVSSITKAEILKYRAHVAKQSAGKLKS----------KTINKFIKCLNMVMNEA-A 171 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAA 237 + T P +K L+ ++ DP S E N ++ + ++ ++G+R GE+ Sbjct: 172 DRYDFTPPHLNIKPLKEEKVHIDPFSIEEVNQILAQVRSDWRDYLLVRFFTGMRTGEIDG 231 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 L WE VD + + +R + + K + R + + L +++K KS Sbjct: 232 LKWEHVDFSRREILIRETYS-AGRWEYTKNDGSQREIEMSTLVYNTLSKRFKE--RDPKS 288 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 E+ F C G P ++ + L W + ++ R PY T Sbjct: 289 ELVF---------------------CTGNGAPVHTPNFLRRVWRPLLSYLKLKYRKPYQT 327 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A L AG NP +IA QMGH T M++ +Y ++ ++ + + + L+ Sbjct: 328 RHTAATIWLAAGENPNWIAKQMGHSTTSMLFTVYARYVPNLTRKDGSAMERLLA 381 >UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaproteobacteria RepID=A0KWT4_SHESA Length = 407 Score = 283 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 94/424 (22%), Positives = 164/424 (38%), Gaps = 53/424 (12%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 + R + F + G RCRE N K N+ I EI F + FP Sbjct: 3 NIRARDGKLFFDFTYEGIRCREQT-VLIDNRLNRSKLTNILNTIEAEIRLNRFVFKSYFP 61 Query: 67 QSSTGAKMVT--------------------TRVIKTFGELCDIWTKIKETELTTNTMKKT 106 SS ++ I TF E W + + + K Sbjct: 62 SSSRCSQFSEYDIRVQQHLAENVEPLTVNIMSNIPTFEEFVGEWVVENKIQWKKSHCKNI 121 Query: 107 KSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIA 166 + ++ + ++ I ++ +R + SN +++ + Sbjct: 122 QMIIECYLLPAFGHIRLNEITRPSLIKFRASIADSRRTGTTEKLSNDW------INHVMT 175 Query: 167 LLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAV 226 L +L A F PF +K L+ ++ +P S E +E + +N + Sbjct: 176 PLRGILNEA-ALRFDFPTPFVNIKPLRIDKTVIEPFSLAEVQYFLEHIRDDFRNYYTVRF 234 Query: 227 YSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKE 286 ++ +R E+ L W+ V+L++ + ++ L + PKT+A R++ L QP ++ALK Sbjct: 235 FTAMRTAEIDGLKWQFVNLDRYEILIQETL-VDGYVETPKTSASYRSIQLSQPVVDALKR 293 Query: 287 QYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKR 346 Q K+TG+ +VF CN P + W A+ Sbjct: 294 QRKVTGNK--------------------TYVF----CNASGNPLEHRNVTKRIWYPALDE 329 Query: 347 AGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 ++RR PY TRHT A L AG NP +IA QMGH T +M++E+Y ++ + + + Sbjct: 330 MCLKRRRPYQTRHTCATLWLAAGENPEWIAKQMGHSTTKMLFEVYSRYVPNATRQDGSAF 389 Query: 407 NARL 410 + + Sbjct: 390 DRLI 393 >UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G7G1_HERAR Length = 387 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 123/419 (29%), Positives = 185/419 (44%), Gaps = 53/419 (12%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETL----KGWEITNSNIKKAGNLRALIVHEINS 56 M +GVE+R IRI F F+GK+ +ET+ + T +NIK A + A + ++ + Sbjct: 1 MGPRTSGVEVRETSIRIIFTFQGKQRKETICLDNEPLHPTPANIKYATRIAAEVRDKVRT 60 Query: 57 GEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRII 116 G F Y FPQS + T GE D W + EL +T+ + K + Sbjct: 61 GLFAYADYFPQSRHA----KPDHVGTVGEFMDKWYA--QLELKPSTLSEYKRMKENFWKP 114 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 + I +SDI + + RT +N + +L ++ A Sbjct: 115 ALGRKRVDKITHSDI---------------TTALKSGTWSSNRTRNNMLYMLRAVFNLAV 159 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM----ESEKGQSQNLWKFAVYSGLRH 232 G I P ++ Q R KPDP S E N ++ E + Q N ++F +SGLR Sbjct: 160 ADGVIHKNPCATIENAQWQRKKPDPFSIVEANRIIASLHEKQHQQVANFYEFMFFSGLRT 219 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 GE L W +VDL K IV +R++ + KT + RTV L AL+ALK Q T Sbjct: 220 GEGLGLDWANVDLHKRIVVIRQSF-VRGEMQETKT-SSERTVKLTNRALDALKRQKAWTL 277 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 K VF N ++S W A+K GIR R Sbjct: 278 L------------------DKSGRVFHNPSTNRPWAKEQNISEP--YWKPALKLLGIRYR 317 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDE-QIAMLNARL 410 PY+TR T+A L +GA PA++A+Q+GH ++ Y Y WI D +D+ ++ + A++ Sbjct: 318 RPYNTRATYATIGLMSGARPAYMAAQLGHS-LEVFYRDYADWIADQDDDREMGKIEAQI 375 >UniRef50_D0J3Y8 Phage integrase n=5 Tax=Burkholderiales RepID=D0J3Y8_COMTE Length = 394 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 115/408 (28%), Positives = 180/408 (44%), Gaps = 54/408 (13%) Query: 5 PTGVEIR----GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 P GV+IR G ++I F + G+ CRE L I S+I++A +LR I +I G F Sbjct: 11 PPGVKIRHLVSGDRLQIAFTWEGQECRELLPACAINKSSIQRAASLRDEIRRKIAEGGFS 70 Query: 61 YLRRFPQSSTGAKMVTTRV-IKTF--GELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 Y FP S A + ++T +L ++K +++ +T + R+ Sbjct: 71 YADYFPDSPRAAAPSKSNPLMETLLQKQLDTYARQVKNGQMSPSTYNGYAKAITGERMRR 130 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 + + S + ++ +E+ T + + N + L SL A Sbjct: 131 WHGLKVGEVLPSLLRDWVSEM----------------DCTSKAIRNMLTPLRSLFEDALN 174 Query: 178 SGFISTKPFEGVKKLQRNRIKPD-------PLSKTEFNALMESEKGQSQNLWKFAVYSGL 230 I PFE + + R P S E A++++ + + + +F +GL Sbjct: 175 DELIDFNPFERIALSKLIRQTAKASDYVVTPFSAAEREAILKACRPDERPMLQFWFETGL 234 Query: 231 RHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKL 290 R GEL AL W +DLE+ I + N + + PKT AGIR V L AL AL+ Q + Sbjct: 235 RPGELQALQWSHIDLERAIARIELN-QVAGVIKGPKTAAGIRDVELSAEALAALRAQRPI 293 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA-RWNAAVKRAGI 349 K E + + G +P+ + + + W KRA + Sbjct: 294 --SELKGERIWLNPRTG--------------------EPWSTDAQIRKTLWQPVCKRAEV 331 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 RNPY RHT+A LLTAGANP ++ASQ+GHE +MV+ YG +I D Sbjct: 332 EYRNPYQVRHTYASALLTAGANPWYVASQLGHEDVEMVFRTYGKFIRD 379 >UniRef50_C8VWS4 Integrase family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS4_DESAS Length = 381 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 160/411 (38%), Gaps = 44/411 (10%) Query: 7 GVEIRGRYIRIWFMFR--GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRR 64 + RG+ I + GKR + WE K+A + A ++EI G + Sbjct: 4 SIVKRGKTYSIVYDINQGGKR----KQKWESGFKTKKEAEAILAQRINEIEKGTY----- 54 Query: 65 FPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPIS 124 T + W + +L+ +T ++ + +K I + P++ Sbjct: 55 -----------INPKKDTLEDYLIRWFDTHKADLSPSTARRYEGIIKQHLIPSLGNIPLA 103 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTK 184 ++ I + ++ L G DN ++ G + +V+ +L L A IS Sbjct: 104 KLQPLQIQEFLSKELEGGR--QDNKKTVGAGLSAASVNYEYRVLHKALNQAVDWQLISRN 161 Query: 185 PFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKF-AVYSGLRHGELAALAWEDV 243 P + VK + + LS+ + L+ K + F A+Y+G+R GE+ W+D+ Sbjct: 162 PADLVKVPKPEKKDMVVLSEQDIARLLNEIKDNYLYIPTFLAIYTGMRLGEVLGSTWKDI 221 Query: 244 DLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 DL +GI++VR+ + F PKT R + + Q ++ L+E K + Sbjct: 222 DLNRGILSVRQASCQVKADDPEFKAPKTAKSKRNIDISQTVVKTLREHKKTQTKWKLVAG 281 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 + + VC + + SL + + R G+ + + RH Sbjct: 282 SNWQDN--------------NLVCALQDGRPINPPSLSSYFRRVASRIGL-FVSFHALRH 326 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 T A LL AG P + ++GH T + +IY + M + L+ L Sbjct: 327 THASLLLKAGIQPKIVQERLGHSTIAVTMDIYSHVMPGMQRQAANKLDDML 377 >UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBE5_AMMDK Length = 414 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 83/348 (23%), Positives = 149/348 (42%), Gaps = 39/348 (11%) Query: 75 VTTRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 +T T GE W + K+ +L T+ ++ ++ + S P+ + + + Sbjct: 92 LTAPARLTLGEWLATWLETYKKGKLRPTTLANYETVIRAYILPSLGSVPLRSVTPASLQA 151 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 N L + +G + RTV +L + L+ A ++G + P E + + Sbjct: 152 LYNSL-------------SARGLSARTVRLVHVVLNACLKQAVKNGLLVRNPAEATEPPK 198 Query: 194 -RNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVN 251 + R+ PL++ E A +++ +G+ + A+ +GLR GE+ L WEDVDLE+G++ Sbjct: 199 LKRRVPVRPLAREEVEAFLKAARGERLYPAFALALKTGLRRGEVLGLKWEDVDLERGVLR 258 Query: 252 VRRNLTILD---------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 VRR+L +F PKT RTV L + + LK + Y Sbjct: 259 VRRSLVEAKDPETGKVRLVFQEPKTEKSRRTVPLTRDVVALLKSHKARQNEEKLYFGEAY 318 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 + VF C KP + + +++ +K+AG+ R + RHTFA Sbjct: 319 ---------EDNGLVF----CTELGKPIW-PRNFLRAFHSVLKKAGLERHRFHALRHTFA 364 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 LL +G + +GHE ++Y ++D + + L+A L Sbjct: 365 TLLLASGEELKNVQELLGHERISTTADVYAEVLEDAKKKAVTRLDAFL 412 >UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoanaerobacter RepID=B0KAZ5_THEP3 Length = 403 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 84/422 (19%), Positives = 156/422 (36%), Gaps = 54/422 (12%) Query: 10 IRGRYIRIWFMF----RGKR--CRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 I+G+ +I F GKR ET++ N +A A + E ++G Sbjct: 12 IKGKKYKISFYIGTDGNGKRKYYIETIEC-----KNKAEAQKYLAKKIVEYDTGT----- 61 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI 123 + T + W + K++ L T + +++ + + Sbjct: 62 ----------LPIDETNITVKDYLKKWLETKKSSLALKTYNDYEQKIRLYINPAIGNYKL 111 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 + I N N +L ++G + RT+ +L L+ A + + Sbjct: 112 LKLTPLIIQNMYNNML-------------EQGLSARTIRYTHTVLNEALKQAIKWQMLRY 158 Query: 184 KPFEGVKKLQRNRIKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAWED 242 P +G ++ + + L+ + +E+ + L++ + SG+R E L WED Sbjct: 159 NPCDGTTLPKQAKKEMKVLTPEQAKKFLEACVYNRWGILFELLLISGMRPSEALGLKWED 218 Query: 243 VDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR---- 295 +D + + V+R LT + PKT RT+ L + + LKE K + Sbjct: 219 IDWKNNRIAVQRTLTRVKNNWQLKEPKTPQSRRTIPLPREVMNDLKEHRKQQSKEKLKAK 278 Query: 296 ------KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA-RWNAAVKRAG 348 K + F E+ K +V V + ++++ + +K AG Sbjct: 279 EYINYDKDKNKFKPEEWEEKLKDPKVYVDYGLVFATETGRPLDLANINYQYFKPLLKNAG 338 Query: 349 IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 + Y RHT A LL AG NP ++ ++GH + + Y + M +E L Sbjct: 339 LPNIRLYDLRHTCATLLLLAGENPKVVSERLGHANITLTLDTYSHVLPTMQEEATQKLKQ 398 Query: 409 RL 410 L Sbjct: 399 ML 400 >UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_MOOTA Length = 390 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 84/401 (20%), Positives = 150/401 (37%), Gaps = 53/401 (13%) Query: 15 IRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKM 74 I + GK+ R TL G + K+ +++ +G F Sbjct: 24 ITVGIDHEGKQRRLTLYG-----KSKKEVLEKLTQALYQQQNGGF--------------- 63 Query: 75 VTTRVIKTFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 T + + W + L +T + ++ L+ I S P+ ++ +DI Sbjct: 64 -IEPSKITVEQWLNRWLTDYAKPHLRQSTWESYETVLRLHVIPTLGSIPLKKLQPADIQR 122 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 L + G + V +L + A +SG + P E K + Sbjct: 123 LYASKL-------------ESGLSPTRVRYIHVVLHEAMSQARESGLLLQNPTEAAKPPR 169 Query: 194 RNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 + K PL+ + +E+ K + A+ +GLR GE+ L W+D+DL+KGI+ V Sbjct: 170 HPKKKVQPLNPEQVKRFLETAKQDPLYPAFLLALGTGLRRGEILGLRWQDLDLQKGILQV 229 Query: 253 RRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 R++L F PKT R + L + ALK ++ Y Sbjct: 230 RQSLIRTREGLKFEEPKTEKSRRQIPLPPSVVAALKRHKAWVNQNKLILGPDY------- 282 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 + VF V NG+ + +N + +AG+ + RHT A LL G Sbjct: 283 --EDHDLVF--PVENGRPR---DPKGFAEYFNRLLDKAGLPHIRLHDLRHTHATLLLLEG 335 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 +P + ++GH T + +IY + + ++ ++ L Sbjct: 336 VHPKVVQERLGHSTVSITLDIYSHILPGLQEKAAERIDGLL 376 >UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSV7_BACS4 Length = 391 Score = 271 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 87/382 (22%), Positives = 157/382 (41%), Gaps = 40/382 (10%) Query: 35 ITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIW-TKI 93 IT N +A A V EI +GE+ F + W TK Sbjct: 34 ITAKNKTEAKKRLAEFVTEIEAGEY----------------IDPSKMKFKDFVKEWETKY 77 Query: 94 KETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNK 153 L T++ KS + I + + + +I+NY + L + Sbjct: 78 GMKHLGAKTLETYKSIINNYLIPTFGNKKLDEFKPINIINYLDCLGEDNARKDGK----E 133 Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALME- 212 G + ++ + +L ++ A + I P E VK + + K +K E L+E Sbjct: 134 GGLSSSSIKYHYRVLRNIFSRAKEWIIIKNNPVESVKPPKVTQEKTSVYTKDEVIELLEL 193 Query: 213 --SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPK 266 +E + + A+ +GLR GE+ L W+D+DL+ G +++ +L + GPPK Sbjct: 194 LKNEPIHQKLMVTAALMAGLRRGEILGLQWDDIDLDAGTISINHSLQYTKEKGYVLGPPK 253 Query: 267 TNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGK 326 N+ IR V++ +E K+ + R + E K +VF + Sbjct: 254 NNSSIRKVSIPMYLVEEFKKYKRTKSKERIQAAELW-------EGGKYFYVF----SSWN 302 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQM 386 KP+Y +++G W +KR G + + RHT A L+ G + I++++GH + Sbjct: 303 GKPFY-PTAVGTWWRRFLKRKGFKYIRFHDLRHTAATLLINEGEHAKTISARLGHADIKT 361 Query: 387 VYEIYGMWIDDMNDEQIAMLNA 408 IYG ++ + +++ LN+ Sbjct: 362 TMNIYGHYLREADEKAANKLNS 383 >UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH28_9BACT Length = 410 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 97/407 (23%), Positives = 166/407 (40%), Gaps = 51/407 (12%) Query: 8 VEIRGRYIRI--WFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 V +R R+ F + RCRE L + + A L+ I G FEY F Sbjct: 9 VRVRKDKDRLLLDFYYSDVRCREYLS-VQANKEGRRYAERQAKLLEQAILDGNFEYAEWF 67 Query: 66 PQSSTGAKMVTTRVI-KTFGELCDIWTKI-----KETELTTNTMKKTKSQLKTLRIIICE 119 P S + R KTF E+ + W + K EL T++ + LK+ + Sbjct: 68 PNSKKCRLFNSVRKSHKTFAEVAEEWKEHVERLHKAGELKRTTLRNYMNSLKS-ILDYFA 126 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + +I S + +Y+ ELL K + ++++N + L + +AY+ G Sbjct: 127 IYEMQNITKSLVDDYKFELLD-------------KPLSKKSINNKLTPLRRIFDYAYEMG 173 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE---KGQSQNLWKFAVYSGLRHGELA 236 +I + VK + +P ++ E A++ + ++ ++G+R GE+ Sbjct: 174 YIEHNVMDRVKNFTLELPEIEPFNQLEVQAILNHLQKNNPKFHAMFTILFHTGMRIGEVL 233 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 A+ W++ D +V+ + T PKT A R V L A++AL+ + T Sbjct: 234 AMKWKNFDEMFCSYHVKEHFT-EKRLDTPKTKASKRIVPLTDEAMKALRNHKQYTFM--- 289 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKRAGIRRRNPY 355 K F+F CN P+ S ++ + W +K+ GI R Y Sbjct: 290 ----------------KSDFIF----CNQYGDPWVSSDNIMKQVWEPMLKKLGIAYRIIY 329 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQ 402 RHT A + AG N A IA +MGH+ + Y ++ + +Q Sbjct: 330 QCRHTHASLSILAGDNLAHIAERMGHKNVGTLITRYAKYVKSVQFQQ 376 >UniRef50_C3K9Z5 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K9Z5_PSEFS Length = 410 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 101/414 (24%), Positives = 163/414 (39%), Gaps = 49/414 (11%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE--- 60 LP G+++ IRI FM+ G R ETL + T IK A + + I G + Sbjct: 21 LPAGMDLHHGSIRIRFMWNGSRRSETLP-YPPTQKGIKSASQVVDQVKGLIKLGLLDDDK 79 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Y FP SS A FGE +W + E+ T K L + Sbjct: 80 YAELFPSSSNVAGGKIN-----FGEYAQLWLDSR--EVVGGTKANYKGALNRYWMPGLAL 132 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 I I + + + + ++ N I+ L ++L A Sbjct: 133 VRIDLITTTLLRRVM---------------AASEWKSPGVKRNAISKLSTILNSAMSEEL 177 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-------SQNLWKFAVYSGLRHG 233 I P ++ +R++ + DP + E N ++ ++F ++G+R Sbjct: 178 IPKNPAAILELPKRSKKEIDPFTLEEANLIIAKMYEHDHWPSTIYAAFFEFVFFTGMRLS 237 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 E A+ W++VD +K +V R + + ++ KT G R V L AL AL + Sbjct: 238 EALAMRWDEVDEQKKTAHVCRGVALGEVVERTKT-GGDRFVLLNDRALHALDFAKEYAER 296 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 +K + Y + +V S L +W +K IRRR Sbjct: 297 RKKGKGKVLETPYIFPPSKNAAYV-------------RQTSDLHKQWVPTLKALNIRRRP 343 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND-EQIAML 406 PY+ RHT+A + +G NPAFI+ Q+GH QM+ Y WI+ +D ++ L Sbjct: 344 PYNCRHTYATICIMSGMNPAFISQQLGHS-VQMLLSTYARWINSSSDWSEMQKL 396 >UniRef50_B1J5J4 Integrase family protein n=4 Tax=Pseudomonas RepID=B1J5J4_PSEPW Length = 396 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 111/408 (27%), Positives = 167/408 (40%), Gaps = 52/408 (12%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEF---E 60 LP GVE+ GR IRI F + KRC ETL T I A +LRA + G + Sbjct: 8 LPAGVELVGRSIRIRFTWNKKRCCETLP-LPQTPKGIAAAASLRAQVKGLDKLGALTAEK 66 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Y FP T + +V + F + W ++ T K +S L+ + Sbjct: 67 YAELFPN--TRSVVVHEQTTPIFFDYAQDWLNS--LQIVEGTRKNYRSALQVYWVPYLAD 122 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 PI I + N++ K + + LL S+ + A Sbjct: 123 KPIDTITSVLLRKIMNDI---------------KWTSPVRRKGVVGLLVSIFQQAVTDEL 167 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-------SQNLWKFAVYSGLRHG 233 I P + + + + DP +K E ++++ ++F Y+G+R G Sbjct: 168 IVRNPALSIPGAKVPKREVDPFTKEEADSIIAHLYETTSGMTAIYAAYFEFCFYTGMRPG 227 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 E+ AL W ++D NV R + KT R V L AL AL++ LT Sbjct: 228 EVMALRWSEIDRRVKTANVCRIQIRGVIQDRTKTKRS-RKVLLNDRALHALEKARPLT-- 284 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYY-SVSSLGARWNAAVKRAGIRRR 352 + + +VF P + + + S +S W AA+++ GIRRR Sbjct: 285 -----------------EARSDYVFAPSGTGDRSEMFIRSETSQKRYWLAALRKLGIRRR 327 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND 400 Y TRHT+A L AG NPAFIA+Q+GH Q++ Y WI+ ND Sbjct: 328 RMYDTRHTYATMCLMAGMNPAFIAAQLGHS-VQVLLSTYAKWINSPND 374 >UniRef50_C0VGS2 Phage integrase n=2 Tax=Acinetobacter RepID=C0VGS2_9GAMM Length = 402 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 101/419 (24%), Positives = 171/419 (40%), Gaps = 56/419 (13%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL- 62 LPTG R I+I F + GKR TL T +N KA +R V++ G + Sbjct: 9 LPTGTRARSGKIQINFKWNGKREWFTL-ALTDTPANFSKAAKIREDFVNKAKYGILKIED 67 Query: 63 ------RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRII 116 + F ++ + + TF + + ++ T KK S L+ L + Sbjct: 68 IEAVTVKPFKKADAAQESLPASHGPTFAQYAQEYL-YNLSDHKHGTKKKYLSILERLWMP 126 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 + PI+ I + + N ++ + +T ++ + L A Sbjct: 127 LFADMPINTISSQMLRSAVN---------------GREWSSAKTRNDALIPLRGAFELAN 171 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQN-------LWKFAVYSG 229 I P + +K + +PDP ++ E ++ + + + A ++G Sbjct: 172 DDEIIDKNPCDRLKNQKTQETEPDPFNEIERERILNWLREKYLADYPTVYWYFVVAFWTG 231 Query: 230 LRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 R E+ AL W+DVD +++ + KTN R V L A EA ++ Sbjct: 232 CRPSEIIALTWQDVDFLNKQIHINKGRVNGVQQETTKTNKA-RFVDLNDFAFEAFQQLRL 290 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 LT + K E F +C+ + + + SL ++ AA+K GI Sbjct: 291 LT--YLKYEHVF--------------------ICDETGEEFTTQKSLSEKFVAALKANGI 328 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID-DMNDEQIAMLN 407 R R Y+TRHT+A L G NP ++ASQ+GH M+ + Y WI+ D N E+IA ++ Sbjct: 329 RYRPAYNTRHTYATVCLMNGLNPVYVASQLGHS-LVMLMKRYAKWINSDKNKEEIAKIS 386 >UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFY4_THET1 Length = 363 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 85/401 (21%), Positives = 157/401 (39%), Gaps = 52/401 (12%) Query: 1 MSKLPTG-VEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEF 59 MS G + RG R G R IT + R ++ + G Sbjct: 1 MSAAGEGKIIKRGNAYRAQVQINGVR-------HSITGKTRAEVQRKRRELLAAADQG-- 51 Query: 60 EYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 ++ R T E W +I + ++ T+ ++ ++ + Sbjct: 52 --------------IMPARTRVTVAEFLSHWLEIIKPQVRPATLADYQNSVRNHIVPALG 97 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + ++ + + + ++LL KG + +TV N + ++ A + G Sbjct: 98 TIKLTKLEPAHLQELYSQLLA-------------KGLSAKTVRNIHGTIHKAIKDAARWG 144 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAAL 238 + + + + +R + L+ + LM++ G + + L A+ +G R GEL L Sbjct: 145 MLPRNVADIARPPKVSRQELQCLTPEQVRLLMQACAGTRYEPLLGLAIATGARQGELLGL 204 Query: 239 AWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 W D+DL++G+V + R LT F PKT++G R+V + +E L+ L R S Sbjct: 205 RWADIDLQRGVVQITRQLTRQGTFSEPKTSSGKRSVHVPVSTVELLRRHRSLQLQERLSA 264 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 Q VF N P +L W+ +++AG+ R + R Sbjct: 265 GD---------RWQDQGLVF----ANTLGGP-MDARNLIRAWHRILQQAGLPRMPFHSLR 310 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN 399 HT A LL G +P I ++GH + ++Y ++DM+ Sbjct: 311 HTSASLLLRQGVSPRLIQQRLGHADIAVTLQVYAHLVEDMD 351 >UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH59_9BACT Length = 390 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 92/403 (22%), Positives = 157/403 (38%), Gaps = 53/403 (13%) Query: 8 VEIRGRYIR--IWFMFRGKRCRETLKGWEITNSNIKKAGN------LRALIVHEINSGEF 59 + RG+ R ++F + G R E + T N K + +I+ F Sbjct: 4 IHARGKKNRLYVYFQYLGVRRHEKTPFFCETGKNGCKCRQCKSTAGWLHELECKIDDKTF 63 Query: 60 EYLRRFPQSS--TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 +Y FP+S M + +FG +W ++T + T S + L + Sbjct: 64 KYAEYFPESRVAKALPMADSSPQISFGTYAILWLDSQKTVFSHATFITYTSSINNL-LAT 122 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 E+ I I+ + I Y + +T+ N++ +L S+L A + Sbjct: 123 FENMSICDIKPAHIRTYIKN----------------SEVSPKTLKNHVGVLSSILSAAVE 166 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL---WKFAVYSGLRHGE 234 I P VK + ++ DPLS E ++ K N+ + A ++G+R GE Sbjct: 167 DDLIPKNPCTSVKLPHISSVEVDPLSLEEITMILNWMKSHHPNMLAFFAVAFFTGMRTGE 226 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 + L W D+D + + R +T + KT RTV +L Sbjct: 227 IMGLQWGDIDFNSHTITISRTITAGKLKHRTKTADS-RTVDILTEL-------------- 271 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 E YH+++ + + L + + N + + + W +K GI+ R Sbjct: 272 --DEYLSYHKQFTYMKSEWLFLTYENKPFN------KTDNIIKTYWKPCLKALGIKYRTL 323 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 Y TRHTFAC +L G N ++ +GH+T M+ YG ID Sbjct: 324 YQTRHTFACLMLDVGENINWLKKMLGHKTLDMILRRYGNRIDK 366 >UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTD1_9BACL Length = 379 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 71/379 (18%), Positives = 136/379 (35%), Gaps = 47/379 (12%) Query: 38 SNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE 97 + K+A A + EI SG + T W + K ++ Sbjct: 35 ATKKEAEKAMAAKLQEIVSGVYV----------------AENNDTVETYLRNWLEDKRSQ 78 Query: 98 LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRT 157 + +T + + ++ I +S +R + +L + K + Sbjct: 79 VRPSTYRGYEWLVRVHIIPHLGGIELSDLRPQHLQALYRKLQSLD-----------KPLS 127 Query: 158 VRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM---ESE 214 RT+ + LL L A + G ++ + V + + + + A + E Sbjct: 128 NRTILHIHLLLHEALDRAVKWGMVARNVADAVDPPRPEVRRSIVWTPEDVRAFLSANEEA 187 Query: 215 KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGI 271 + + + AV +G+R GE+ L W ++D + +V + + LT + PKT+ Sbjct: 188 EARYYAAFVLAVMTGMRKGEILGLRWSEIDWDSAVVRINQTLTWTKQGPILQEPKTDRSR 247 Query: 272 RTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYY 331 R+V L + AL+ + L R TE + VF Sbjct: 248 RSVALSPETIVALRRHHALQAQERLLYG---------TEYKDHDLVFA-----RPNGEPL 293 Query: 332 SVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 +L W A+KRA + R + RHT A LL G +P ++ ++GH T + + Y Sbjct: 294 HPRTLDNAWYRALKRANVPRIRFHDLRHTHASLLLAQGVHPKIVSERLGHSTINITLDTY 353 Query: 392 GMWIDDMNDEQIAMLNARL 410 + + + + + Sbjct: 354 SHVLPGLQKQVADRFDEVI 372 >UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQ70_ANATD Length = 325 Score = 264 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 133/348 (38%), Gaps = 39/348 (11%) Query: 75 VTTRVIKTFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 TT TF + DIW + + +L T + + ++ I Sbjct: 5 STTNFGLTFSQWLDIWMNQFMKIKLRPTTYSSYIQLINKHIKPKLGHIQLQNLSPLAIQE 64 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 N LL + + +TV N ++ S L+ A + G+I+ E V + Sbjct: 65 CYNSLL-------------LENLSPKTVKNIHVIIHSALKQAIKCGYINQNVSEAVALPK 111 Query: 194 RNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 R + LS + +++ + S + +Y+GLR GEL L W+D+D + ++V Sbjct: 112 VERPEIKTLSSEQVTTFLQAAQTDSLYPAFLLELYTGLRRGELLGLKWDDIDFDNCTIHV 171 Query: 253 RRNLTILD---------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 +R+L + + PPKT AG R + + + LKE Y+ + S+ F Sbjct: 172 KRSLVRVYDHNLKKTTLLLQPPKTKAGYRVIPIPDFVVAELKELYEEHQRIKLSQPNF-- 229 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 L+ +F+ Q + ++ +K+A + + RHT A Sbjct: 230 --------NSLNLMFVT-----TQGTPIDPRNFERKFKQLLKKANLPNIRLHDLRHTVAT 276 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 LL +P + +GH +IY ++ + + L L+ Sbjct: 277 LLLQQNVHPKIVQEILGHRDISTTLDIYSHVNIELKKKATSCLVEILN 324 >UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepID=B7DTQ3_9BACL Length = 392 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 71/378 (18%), Positives = 143/378 (37%), Gaps = 45/378 (11%) Query: 38 SNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE 97 + A A +V +++ G + KT G W K T+ Sbjct: 45 KTKRDAERFLATLVEQVHDGTYV----------------EPSKKTVGAYLREWLDDKRTK 88 Query: 98 LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRT 157 + T++ ++ I ++ +R S I +L G+ + + Sbjct: 89 VRPGTLRSYVWLVEHHIIPRIGQLELAKLRPSHIQKLYTDLQTGD-----------EHIS 137 Query: 158 VRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG- 216 R+V + +L L A + G I+ + V+ + R + + + +A +++ + Sbjct: 138 KRSVLHAHRILHQALDRAVKWGLITRNVTDAVEPPRPARQEMRVWTDEQLDAFLQAARKS 197 Query: 217 QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM---FGPPKTNAGIRT 273 + + +G+R GE+ AL WEDVDL+ G+V V R+ + PKT +G R+ Sbjct: 198 RYYVAFVLLSSTGMRVGEVLALRWEDVDLQAGLVRVVRSYSYTGKGYRIEEPKTESGRRS 257 Query: 274 VTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSV 333 + L ++ L++ R + + + V +C KP Sbjct: 258 IALPPAVVDLLRKHKTEQAARRLMVGSAW---------EDNDLV----ICTAFGKPIL-Q 303 Query: 334 SSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGM 393 +L ++ ++R G+ R + RHT A LL G +P + ++GH + Y Sbjct: 304 HNLRTSFHRIIERTGLPRIRLHDLRHTHATILLQRGVHPKVVQERLGHSDITLTLNTYSH 363 Query: 394 WIDDMNDEQIAMLNARLS 411 + + + ++ S Sbjct: 364 VVPGLQEAAARSIDDLFS 381 >UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces griseus subsp. griseus NBRC 13350 RepID=B1VP49_STRGG Length = 423 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 84/398 (21%), Positives = 133/398 (33%), Gaps = 39/398 (9%) Query: 34 EITNSNIKKA-GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTK 92 K A G R + ++ Q T + FG+ W Sbjct: 29 PDGTRTRKFAYGKTREEVASQLTE---------MQEMTRQGIPAASSTMAFGDYLTYWLA 79 Query: 93 IKETE-LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNP-- 149 E L T+ + + ++ + +D+ + E L Sbjct: 80 TIAPERLKPATLNSYEGLSRLYIRPALGKKRLNRLSPADVRRFLAEFKAACLCCLRGADE 139 Query: 150 -------------RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 R K+ + RTV A+L S L+ A + I+ V+ Sbjct: 140 ERPEDKRTCCAVGRCCKRRPSARTVQYIHAVLRSALQQAIREELIARNVARIVETPTVEP 199 Query: 197 IKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 + PL E L+++ + LW V +GLR GE L W DVDL G + VRRN Sbjct: 200 KEVRPLDAAEVRLLLKTARPHRLYALWLLLVSTGLRRGEALGLTWADVDLTAGTLRVRRN 259 Query: 256 LTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 + + +FG PKT +RT++L + ++AL +K + + G Q Sbjct: 260 VQRIRRELIFGTPKTMRSVRTISLPKSCVQALTAHRTQQEREQKVAGAKWQQTPG----Q 315 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 VF SL + A +RR + RHT A LL G + Sbjct: 316 PAGLVFTTLT-----GRVTDPRSLNRMLTILCRDAKVRRVRVHDLRHTCASLLLAQGVDA 370 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 I +GH T M + Y + ++ L Sbjct: 371 RTIMETLGHSTITMTLDTYAHVMGSTLRAAAEQMDDAL 408 >UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUQ4_RUBXD Length = 379 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 83/388 (21%), Positives = 136/388 (35%), Gaps = 49/388 (12%) Query: 36 TNSNIKKA---GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWT- 91 T K+ G RA + ++N S + GE D W Sbjct: 27 TAEGRKRKTVYGKTRAEVAKKLNKAL---------SDREDGLFFDAGNLKVGEYMDRWLR 77 Query: 92 KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRS 151 E + T+ K Q++ + + + + + + L Sbjct: 78 DSVEGNVGPRTLANYKLQVRRHIKPVLGEIQLKTLTPAHVQGLYRQKLDA---------- 127 Query: 152 NKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM 211 G +V A+L L A + G + E V + + D L+ E + Sbjct: 128 ---GLAPSSVRYIHAVLHRALTQALRWGLVPRNVSEAVDLPKLVSEEVDALTPEEARKFL 184 Query: 212 ESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKG---IVNVRRNLTILD-----MF 262 ++ +G + + L+ AV +G+R GEL L W D+DL + + V R L + F Sbjct: 185 DAARGDRFEALYVVAVMTGMRRGELLGLRWSDIDLGQNAPATLRVGRQLQRMRDGSGLKF 244 Query: 263 GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRV 322 PK G RT+ L A+EALK R Y E VF V Sbjct: 245 VAPKGGKG-RTIRLPSRAVEALKAHRARQAEERLKAGPLYRDE---------GLVFASEV 294 Query: 323 CNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHE 382 P + + +K+AG+ + RHT A LL+ G NP F+ +GH Sbjct: 295 GT----PLEPSNIDRRSFKPLLKKAGLPDIRFHDLRHTCATVLLSQGVNPKFVQELLGHA 350 Query: 383 TAQMVYEIYGMWIDDMNDEQIAMLNARL 410 ++ Y ++ M D+ + + L Sbjct: 351 DIKLTLGTYSHFLPSMGDQTANAMESAL 378 >UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYN2_9DEIN Length = 387 Score = 258 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 85/403 (21%), Positives = 143/403 (35%), Gaps = 43/403 (10%) Query: 12 GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTG 71 M GKR R G+ T K+A A ++ + G Sbjct: 15 DGRYEYSLMISGKRHR----GYAKT---RKEAAKKLAELLV----------------AYG 51 Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 ++ T E C+ W E + T K L+ I I + ++ + Sbjct: 52 RNLLPDPDRITLKEFCERWLTSVEHRVKPTTHYGYKVALEKHAIPILGDIAVQRLQPLHL 111 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 + +LL D R K + TV L + L A + G + P + VK Sbjct: 112 THLYADLLKKRIHPNDPKRL--KTLSPTTVRLVHRTLHAALEDAVRWGLLPWNPADRVKP 169 Query: 192 LQRNRIKPDPLSKTEFNALM-ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 Q R + + E + E++ + L+ A+ +G+R GEL L W D+D ++G + Sbjct: 170 PQAPRYTGEVWTPEEVWRFLAEAQHSRLYALFFLALMTGMRRGELLGLKWADIDWQEGAI 229 Query: 251 NVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG 307 VR+NLT + PKT R V + LE L++ + R + E Sbjct: 230 WVRQNLTKAGSKRVVQSPKTYRSSRPVDVSSDVLEVLQQHREQQEKDRLGIGDAWTDE-- 287 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLT 367 +VF V S+L + A +KRA ++ + R T L Sbjct: 288 -------GWVFTTSVGT-----PIEPSNLRREFLAIIKRAKVKEIRFHDLRDTHVSLLAL 335 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 AG +P ++ ++GH + + Y + + L Sbjct: 336 AGVDPKVVSERVGHASVAFTQQTYQHLFRAQRKKAALAVGELL 378 >UniRef50_C8VWK7 Integrase family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWK7_DESAS Length = 389 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 75/379 (19%), Positives = 136/379 (35%), Gaps = 44/379 (11%) Query: 41 KKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTT 100 ++A L + E+ G++ TF E W + K+ +L Sbjct: 40 REAKKLLDVFSAEVQKGQY----------------IAPSKLTFKEFSQKWLESKK-DLAP 82 Query: 101 NTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKG-RTVR 159 T+ + K L + + I I+ I+ + L K+G + Sbjct: 83 KTLYRYKEILNSRILPAMGHLKIEDIKPFHIMQFYGNL-----QEPGIREDGKEGTLSPA 137 Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM---ESEKG 216 TV + LL ++ A + I T P V+ + + K + + AL+ E + Sbjct: 138 TVLYHHRLLTNIFNAAVKWQIILTNPALRVEAPKAKKHKATSYEEEDTAALLSALEEQPL 197 Query: 217 QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP----PKTNAGIR 272 + Q + A+ GLR GE+ L W+D+DL KG + VR++ L G PK + R Sbjct: 198 KFQAIVYIALGCGLRRGEIMGLEWKDIDLTKGTLEVRQSSQYLPGHGTFAKSPKNESSER 257 Query: 273 TVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYS 332 + + + LK+ R + R+ Sbjct: 258 IIAVPTETMSLLKQHRVQQNEQRLQVGGLWQAS--------------DRLFTTWDGKPMH 303 Query: 333 VSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 S+ ++ +K + + RHT A +++ AG IAS++GH + IY Sbjct: 304 PDSITKWFSGFLKNNNLSPLPFHGLRHTAASYMIKAGIPLKNIASRLGHSSPNTTLNIYA 363 Query: 393 MWIDDMNDEQIAMLNARLS 411 ++ E +N L+ Sbjct: 364 HSFKSVDAEAANKMNDILT 382 >UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN2_9FIRM Length = 526 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 80/366 (21%), Positives = 142/366 (38%), Gaps = 31/366 (8%) Query: 50 IVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKS 108 ++ + E L++ ++ TG+K R FGE D W + + ++ T ++ Sbjct: 39 VLAKTKRECQEKLKQLRETMTGSKTEKVRPEMPFGEWLDFWYQNYVKPQIRPTTQANYEA 98 Query: 109 QLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALL 168 ++ I P++ + D+ + + L KG + V A Sbjct: 99 KIYQHIIPELGKIPLNQLAQKDLQQFYARMKTAGRLIRTEQF--GKGLSDSMVRGLHAAC 156 Query: 169 CSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM-ESEKGQSQNLWKFAVY 227 S L A Q G I T P G K + + L + E + +++ L+ + Sbjct: 157 RSALEKAVQEGLIRTNPAVGCKLPPKRGREMQVLGREELQRFLIQAQAEGYFELFLLDLC 216 Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEAL 284 +GLR GEL AL W+D+D G + V + + + PKT A IR + L +E L Sbjct: 217 TGLRRGELLALQWDDLDFRTGALTVNKQVYEVKGRLQVSVPKTRASIRRLVLPPGVVEVL 276 Query: 285 KEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAV 344 + + ++F V K+ + ++ R + Sbjct: 277 RAYRETVDSR---------------------WMFPSPV---KEDVPMTPGAVRRRLQIIL 312 Query: 345 KRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIA 404 +RAG +R + RHTFA L G + +++ +GH +A +IY DM E A Sbjct: 313 ERAGCKRIRFHDLRHTFATLSLENGMDVKTLSAMLGHVSAATTLDIYTHVTGDMQSEAAA 372 Query: 405 MLNARL 410 ++ L Sbjct: 373 KIDRGL 378 >UniRef50_A4ILC8 DNA integration/recombination/invertion protein n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ILC8_GEOTN Length = 387 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 90/417 (21%), Positives = 163/417 (39%), Gaps = 48/417 (11%) Query: 4 LPTGVEIRG-RYIRIW----FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGE 58 + +E RG R+ F GKR + T T K+A A + EI +GE Sbjct: 1 MAGSIEKRGKNSYRLVYSMGFDANGKRIKRTKTVHVKTK---KEAEKELAKFIAEIEAGE 57 Query: 59 FEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIII 117 + + + +W E +L+ T + + + T I Sbjct: 58 Y----------------IKPAKMSLSDFIQLWRDNYAEKQLSPKTFETYNNYINTRIIPQ 101 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 ++ I+ ++ + N L ET K + T++ Y +L ++ A + Sbjct: 102 LGHLQLADIKPIHLIRFLNNLKKDETRLDGK----KGSLSEATINYYRRILKNIFNRAVE 157 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM---ESEKGQSQNLWKFAVYSGLRHGE 234 F+ P E + K + + K D + E L+ E E + + + A+ GLR GE Sbjct: 158 WKFLQVNPAEKLPKEKEDIGKGDVYDENETRLLLKCLEKEDLKWRLYFTLALTCGLRKGE 217 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKL 290 L AL WED+DLE G + V+ +L+ G PK+ R + + L LK+ Sbjct: 218 LLALQWEDIDLESGTLYVKHSLSYTKEKGFFLKEPKSKKSKREIAIPSFVLPLLKKYK-- 275 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 + +E + E + ++ F+ NGK + S +W +KR +R Sbjct: 276 -------NVRLREKEKLQDEWEGGNYNFVFATWNGKP---HHHSYPRTKWERFLKRNNLR 325 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 P+ RHT A +L G N ++ ++GH + ++ ++ Y + + + Sbjct: 326 YIRPHDLRHTSATIMLNNGVNYKTVSERLGHSSTRITFDFYVHRTKEADRSAAECFD 382 >UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSP6_9BACI Length = 399 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 91/417 (21%), Positives = 166/417 (39%), Gaps = 45/417 (10%) Query: 6 TGVEIRGRY-----IRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 ++ RG+ + + +GKR R T + +K LR + E+ Sbjct: 2 ASIQRRGKSSFLLVVEAGYDAKGKRLRRTKTIRIEDEALLKTTKKLRDYLNEEL------ 55 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIW-TKIKETELTTNTMKKTKSQLKTLRIIICE 119 +F + + +K + W TK EL+ T+ S +K + Sbjct: 56 --LKFKMEVEAGEYIAPEKMK-LADFIKEWETKYAVKELSETTLNNYLSHIKNHILPALG 112 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 I I+ I+N+ +++ + KK RT++N + ++L+ A + Sbjct: 113 HMRIDQIKPVHIVNFLDQIKRAD--------GKKKPLATRTIENAYLTIRNILQRAVEWQ 164 Query: 180 FISTKPFEGVKKLQRNR---IKPDPLSKTEFNALMES---EKGQSQNLWKFAVYSGLRHG 233 I + P VKK + + + + E AL + E + A+ +GLR G Sbjct: 165 IIKSNPASAVKKPKSKKEAVKEVQVYDEKEVEALFRAVQNEPFHWRIFTTLAIAAGLRRG 224 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTI---LDMFGPPKTNAGIRTVTLLQPALEALKEQYKL 290 EL AL W ++DLEKG++ + + + + PKT R V+L + + LK + Sbjct: 225 ELLALEWSNIDLEKGVIRINKAIVKGRKRSVEKSPKTKKSNRLVSLPKSVVAELKLYRRH 284 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 + + K++ ++F CN + +Y ++ W KRAGIR Sbjct: 285 WLKQKLQAGDLW--------KEEKEYLF----CNIDGRHFY-PTTPTTWWRRFTKRAGIR 331 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 + RHT A L+ G + IA ++GH ++ +IYG + + E L+ Sbjct: 332 YIRLHDLRHTSATLLINQGVHAKIIAERLGHSDIRVTMDIYGHALQKADHEAANKLD 388 >UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWI5_9AQUI Length = 369 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 84/373 (22%), Positives = 145/373 (38%), Gaps = 56/373 (15%) Query: 41 KKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWT-KIKETELT 99 ++A + A + E+N+G F C+ W K + + Sbjct: 33 REAEKVLAEKLAELNAGS----------------SVLPPEVRFSFFCEEWLSKYAKGSVK 76 Query: 100 TNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVR 159 +T ++ + ++ + +S I + Y E L + Sbjct: 77 PSTFRRYEGIIRNHFMPRFGDKKLSRITTGMLQGYVAERLSQ--------------VSPT 122 Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQ 219 TV + LL + + A G+I P + +++ +R + + D L+ E L+E+ + Sbjct: 123 TVLQEVVLLKEMFKHAQSWGYIKHNPAQNLQRPRREKKEIDILTPEEVEFLLENTHEHYR 182 Query: 220 NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQP 279 + AV +GLR GEL L W+D+D + VRR L F PK+ I V + Sbjct: 183 VAFLTAVMTGLRAGELWGLKWDDIDWHSKQIYVRRTL-WNGEFHTPKSRHSIGKVDMPDV 241 Query: 280 ALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR 339 +E LK R K + VF + K +P + + Sbjct: 242 LVEELKLWE------------------IRCPPNKYNLVF----PSPKGEPSEHQNVVNRY 279 Query: 340 WNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM- 398 + A++RAG+R + + RHT A + AG N +I Q+GH + +IYG +DM Sbjct: 280 FKPALRRAGLRVVSFHSLRHTNASIRIRAGQNIKYIQRQLGHASINTTLDIYGHLFEDMD 339 Query: 399 -NDEQIAMLNARL 410 N Q +L+ L Sbjct: 340 FNRSQAQLLDGVL 352 >UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6GR01_9BURK Length = 450 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 86/398 (21%), Positives = 162/398 (40%), Gaps = 61/398 (15%) Query: 44 GNLRALIVHEINSGEFEYLRRFPQSSTGAKM----------------------------- 74 + A IV EI G F Y FP S K+ Sbjct: 2 ERVMAGIVAEIKKGTFRYRSAFPSSRNLEKIEALETEQYQPTSPMVSIPMANQSVRQAVD 61 Query: 75 -VTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 +++ TF E + + E+ + ++ + L+ I IS I D+L Sbjct: 62 NISSSGHPTFTEFAQKFIEENESLWKRSNIRTKRDILEKWLIPQFGKRVISSITKQDLLE 121 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 +R+ L + + +++ + + +L A F T P++ +K+++ Sbjct: 122 FRSVLAKAP------GKKPGTTMSASRINHVMTSVKQVLDEA-ADRFNFTTPYQNIKRMR 174 Query: 194 RNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 + P + E +++ + ++ + ++G+R GE+ L W+ +D EK ++ +R Sbjct: 175 IKKTDVTPFTIEEVEMIIKYCREDFRDYFTVKFFTGMRPGEIHGLKWKYIDFEKRLITIR 234 Query: 254 RNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK 313 + + D PKT R + + EALK Q+ +TG K Sbjct: 235 ETI-VDDYEETPKTADSNRDIQMAPQVYEALKAQWGVTG-------------------TK 274 Query: 314 LHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPA 373 +VF CNG P + + W ++ G++ R PY TRHTFA +L AG +P Sbjct: 275 SPYVFAN--CNG--GPLTNRNMSNRVWYPMLRSLGLKLRTPYQTRHTFATLMLAAGESPE 330 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 +IA QMGH + +M++++Y ++ ++ + L+ Sbjct: 331 WIAFQMGHSSTEMLFKVYSRYVPNLTRRDGSAFERMLA 368 >UniRef50_B0KAT2 Phage integrase family protein n=7 Tax=Clostridia RepID=B0KAT2_THEP3 Length = 373 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 72/380 (18%), Positives = 141/380 (37%), Gaps = 47/380 (12%) Query: 38 SNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ET 96 K+A A I+ +I EF T + + W KI E Sbjct: 35 KTKKEAEKALAEIIAKIEKNEF----------------IEPSKITLQQFINEWLKIYGEP 78 Query: 97 ELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGR 156 + T+ KS + I + ++ +I + N L +K Sbjct: 79 KWAPKTLVSNKSLIDNYIIPNLGHIELQKLKPVEIQKFYNSL-------------KEKQL 125 Query: 157 TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG 216 + T++ LL +L+FA + +I+ P E V+ ++++ + + + K Sbjct: 126 SNTTINYVHRLLNQVLKFAVKWQYIAKNPCELVEAPKKDKKEFVTWNFEHVKKAKKIFKD 185 Query: 217 QSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIR 272 + A+Y+GLR GE+ L WED+D + + VRR +D +F PKT Sbjct: 186 TPIYIHVMIALYTGLRLGEICGLRWEDIDFKNQTITVRRTAQRIDGRFIFKEPKTETSKG 245 Query: 273 TVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYS 332 +++ ++ LK++ ++ Y EY + + + Sbjct: 246 IISIPDFLVQILKQEKNKQLQNKLIFGEKYITEYE------------GFISVWEDGRFKE 293 Query: 333 VSSLGARWNAAVKR-AGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIY 391 + ++ +K+ + I + RHT A +L +G + I+ ++ H + Y Sbjct: 294 PDYVTKKFRKILKKQSDIPVIRFHDLRHTHATLMLRSGVDLKIISKRLRHGRISTTADFY 353 Query: 392 GMWIDDMNDEQIAMLNARLS 411 +M+ E + L + LS Sbjct: 354 SHVDLEMDREALRKLESNLS 373 >UniRef50_C3EB65 DNA integration/recombination/invertion protein n=1 Tax=Bacillus thuringiensis serovar pakistani str. T13001 RepID=C3EB65_BACTU Length = 367 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 81/383 (21%), Positives = 148/383 (38%), Gaps = 47/383 (12%) Query: 36 TNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK- 94 T N ++A AL + EI GE+ F + W + Sbjct: 21 TAKNKRQAEKELALFIAEIEVGEY----------------IKPQKMLFKDFFAEWIQKYA 64 Query: 95 ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKK 154 +T L T+ L T I + + + I+ ++ + L K Sbjct: 65 KTNLQKTTLFNYIHILDTHIIPVLGNKKVEDIKTIHLVTLFHGKLPA------------K 112 Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM--- 211 G T+++ + L + A + GFI P +GV KL+ R + P + E ++ Sbjct: 113 GLATTTINSIHTRVKMLFKKACEWGFIKKNPMDGVSKLKNKRQELQPYDQKEIVKILALT 172 Query: 212 ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM---FGPPKTN 268 E EK ++ L++ A+ +G+R GEL L W +D + +V++++ + PKT+ Sbjct: 173 EQEKDMNKMLFQLAIVTGMRRGELLGLEWGHIDFQNDMVHIQQTIVRAGKEILLKEPKTS 232 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 R +++ LK+ K R + + E +F+ NG+ Sbjct: 233 KSKRIISIPPTFTTKLKQYKKYCAEKRIACGDLWEGE---------EHLFLFSTWNGRP- 282 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 + RW ++ G+R + R T A +LLT G N I+ ++GH Q Sbjct: 283 --LTPEKASTRWQYFTQKHGLRHIKLHGLRSTHATYLLTQGENLKVISERLGHSDIQTTM 340 Query: 389 EIYGMWIDDMNDEQIAMLNARLS 411 IY ++++N + L+ Sbjct: 341 NIYAHVLEEVNKKASNHFETLLT 363 >UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae RepID=A9BYB6_DELAS Length = 375 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 109/408 (26%), Positives = 175/408 (42%), Gaps = 48/408 (11%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 GV +R +Y++I G RE L+ + T +NI+ A +RA I+ +I G F F Sbjct: 2 PGVIVRDKYLQIDLRAHGF-GRERLE-LQPTPANIRHAERMRAEILGKIERGTFVLGDYF 59 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISH 125 P S V T G+L W +K+ EL +T+ + + + Sbjct: 60 PDSPRARADV---PSMTVGQLFGEWLDVKKPELQHSTIHSYQQTIDSY------------ 104 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 R +L+ T + +T +N ++L +L + Y++ ++ Sbjct: 105 ----HFDGVRRDLVGNFTFRSLKRLLARLPANPKTFNNVASVLRQVLEYGYKAKILTEPL 160 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVD 244 E ++ +R + +PDP + E L+ K ++ +N ++FA +SGLR EL AL W VD Sbjct: 161 HESIEMRRRQKPEPDPFTLDEVEVLLSKMKAEAARNYFEFAFFSGLRPSELIALTWSKVD 220 Query: 245 LEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 L G V V LT KT + +R V L A +AL+ Q K++ Sbjct: 221 LRSGTVMVDSALTR-GRVKGTKT-SEVRKVELPGRARDALERQRKVSQL----------- 267 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW 364 VF+ + + L + W A+K +GIR R+ TRHT+A Sbjct: 268 --------AGGRVFLTVAGGELEN---TDMPLDSWWKPAMKVSGIRHRDARQTRHTYATM 316 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIA-MLNARLS 411 +L AG PA+ A QMGH +M Y WID + L++ +S Sbjct: 317 MLMAGVTPAYAARQMGHG-IEMFLRTYSKWIDGADKGAEQRKLDSFIS 363 >UniRef50_D1C8V1 Integrase family protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8V1_SPHTD Length = 376 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 78/400 (19%), Positives = 131/400 (32%), Gaps = 54/400 (13%) Query: 16 RIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMV 75 R+ F +G R R++ G R + ++ E P Sbjct: 23 RMTFWEQGTRRRKSFYG------------RTRQEVADKLARALVEQQYGLP--------- 61 Query: 76 TTRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNY 134 +T + + W + + L T + + + T ++ + + Y Sbjct: 62 VVSERETVKDYLERWLEDVARPSLRPRTYESYRGIITRHLTPALGRTRLARLSPDQVQRY 121 Query: 135 RNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR 194 N+ G + RTV + A+L L A + G +S ++ Sbjct: 122 INQ-------------KQAAGLSPRTVTYHRAVLRKALNDAMRWGLVSRNAAALAAPPKQ 168 Query: 195 NRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 +R L+ E +++ G + L+ A+ GLR GE L W+DVDLE G + VR Sbjct: 169 DRPPARFLTPEEARHFLDTVAGHRLEALFTVALAVGLRQGEALGLRWDDVDLEAGTLTVR 228 Query: 254 RNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 L + PKT RTV L AL AL+E R Sbjct: 229 YALQRSGGALVLVEPKTQRSRRTVALPAVALRALREHRTRQLEER----------IAAPY 278 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 FVF + +L ++ AG+ + RH A L+ G Sbjct: 279 WDDQGFVFTSTIGTA-----IDARNLTREFHRLRAEAGLPWLRFHDLRHGCASLLMAQGV 333 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 NP + +GH + Y + + ++ L Sbjct: 334 NPRVVMEILGHSQITLTLGTYSHVAPTLARDAADKIDGIL 373 >UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus RepID=B4BIA4_9BACI Length = 384 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 67/374 (17%), Positives = 135/374 (36%), Gaps = 49/374 (13%) Query: 43 AGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKI-KETELTTN 101 A I ++++ G F +S+ F + W + + Sbjct: 44 AKKELLKIKNQVDDGS-----YFKESTED-----------FSMFMERWFNTSYKRTVEIT 87 Query: 102 TMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTV 161 T K + ++ + + I+ I DI ++ + L G + + Sbjct: 88 TAKSREYVIRNHIMKYFQHKKINEITTFDIDSFYVDKLDT-------------GYSGAYI 134 Query: 162 DNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL 221 LL A + + P + K + + + E N + K S + Sbjct: 135 RQMHNLLNQAFDQAVKWSLVKVNPVKNAKPPKVKSEEKITWTVDEVNRFLNLIKDSSMEI 194 Query: 222 -WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTL 276 + A+++G+R GE+ L W+DVD E + ++R+L + +F PKT R +++ Sbjct: 195 PYLLAIFTGMRRGEVLGLKWDDVDFENKKIRIKRSLCFVSGKGLIFKEPKTKKSKRQISI 254 Query: 277 LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL 336 Q + LK+ + ++ Y VC KP +L Sbjct: 255 SQHVVNVLKKHKQKQEFQKEKLGVQYQDNNLI-------------VCTDDGKPL-DPRNL 300 Query: 337 GARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID 396 ++ ++ A + R + + RHT A L+ G NP ++ ++GH + ++Y D Sbjct: 301 LRQFYRLIEEANVPRISFHDLRHTHATILMQQGENPKVVSERLGHSRVGITLDLYSHVSD 360 Query: 397 DMNDEQIAMLNARL 410 D+ ++ L Sbjct: 361 DLQEQAAEKFENAL 374 >UniRef50_Q3Z840 Site-specific recombinase, phage integrase family n=6 Tax=Bacteria RepID=Q3Z840_DEHE1 Length = 435 Score = 251 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 73/395 (18%), Positives = 146/395 (36%), Gaps = 46/395 (11%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR R++ + T K+A ++ ++G F + + Sbjct: 26 GKR-RQSWHTIKGTK---KEADKKLRELLTAQDNGIFV----------------KQSKLS 65 Query: 83 FGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 FGE + W + + + T T + + ++ + I Y L Sbjct: 66 FGEWLENWCRDYVKIQTTQRTFESYYQNIIGHIEPALGKVILTELTPQIIQAYYARQLEK 125 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 K G + R+V ++ L+ A + G I P + V+ + + Sbjct: 126 ------GRADGKGGLSARSVLYQHRIISKCLKQATKLGLIMRNPADAVEPPRPRKTAISV 179 Query: 202 LSKTEFNALMES-EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN----L 256 K E L+++ E + +Y G+R GE AL W+D+DL++ + + Sbjct: 180 PDKDELPRLLDAFETTPYYVFYCLLLYCGMRRGEALALRWKDIDLKQDTIQIAETAFTLR 239 Query: 257 TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 + + PKT R + + L E K++ T Y+ + G E F Sbjct: 240 SGEYVIKEPKTPHSRRCIDIPPTMKLLLLEY--------KADQTAYYAKLG-VELGLHDF 290 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 VF + +++ + AV++AG + + RH A +L AG +P ++ Sbjct: 291 VFT-----RPNGEPLNPNTVTHTFLKAVRKAGFDKLRLHDLRHLHATLMLQAGIHPKIVS 345 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 ++GH + + + Y + + + + + + LS Sbjct: 346 ERLGHASINITLDTYSHVMPGLQKKAVNVFDKMLS 380 >UniRef50_A8MGP9 Integrase family protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGP9_ALKOO Length = 369 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 74/395 (18%), Positives = 139/395 (35%), Gaps = 53/395 (13%) Query: 22 RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIK 81 GKR R+ + G+ K+A I+ ++N+ F Sbjct: 22 NGKRKRKWISGFNTQ----KEAEKKLPEILQQLNTNTFV----------------DTNNI 61 Query: 82 TFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 T + +W + + + T K I + + I+ I N+L Sbjct: 62 TLRDYMQLWLEDYAKPNVAPTTYDKYTYAANK-VSEILGNMKLQQIKPIHIQQLVNKL-- 118 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD 200 N T TV +Y +L + + A + FI P V + + K Sbjct: 119 -----------NNSDVTPSTVLSYYRVLNTAINQAVKWQFIQYNPCVAVTPPRNTKNKMM 167 Query: 201 PLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 L + E L++ K + A+ GLR GE+ L WE++D G++++ NL + Sbjct: 168 ILDQDEIQILLDKSKDHVLYPVIVLALLCGLRRGEILGLQWENIDFFSGVIHLENNLVMA 227 Query: 260 D---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 + + KT+ G R V + +E LK+ K ++ + YH Sbjct: 228 NNESILKETKTSTGRRAVDISSNVVEVLKKVKKQKMSYKLLYGSSYHDS----------- 276 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 VC + + + + + A + + + RHT A LL +G +P + Sbjct: 277 ---NFVCTWEDGRPFRPDYIPKAFAKILVSANLPKIRFHDLRHTHASILLKSGIHPKVVQ 333 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 ++GH + + + Y + + + S Sbjct: 334 ERLGHSSISITLDTYSHLVPSLQKSAAEKMATMFS 368 >UniRef50_A1TPL3 Phage integrase family protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TPL3_ACIAC Length = 403 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 103/412 (25%), Positives = 165/412 (40%), Gaps = 34/412 (8%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 GV RG I + F + GK+ TL T +N+K A LRA IV EIN G+F + FP Sbjct: 9 GVRPRGNRIEVRFTWEGKQVSPTL-DLRPTAANLKHAARLRATIVEEINQGKFRFAEHFP 67 Query: 67 Q--SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPIS 124 + T + T + F + +W ++ L ++ L + + P Sbjct: 68 DYKNLTAVQPATDEESRLFRDWAKVWGRLSARGLEHSSHAVYLRHLAAYWLPVFGHLPPE 127 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTK 184 I + +L +L + ++ +T +N + L + ++ Sbjct: 128 RITHVMVLERLADL--SAPRLDEKTGKTRRALARKTQNNILIPLRGVFELICKARTEVVD 185 Query: 185 PFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ----SQNLWKFAVYSGLRHGELAALAW 240 P +G+ + + PDP S E ++ + + Q + ++F+ ++G R E AL W Sbjct: 186 PTDGIDNQKVQKAMPDPFSPDEVEVILRALEEQAGSTWADYFEFSFFAGFRASEQIALLW 245 Query: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 EDVD V R + KTN R V L A A++ Q T + Sbjct: 246 EDVDHRSRTALVWRTRVLTKDKDRTKTNV-ERQVELNDRAYNAIRRQRARTEAAGRE--V 302 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 F++ G KP+ S W AA+++AG+R R P R T Sbjct: 303 FWNPNTG--------------------KPFIDEQSQRRVWRAALRKAGVRYRAPKECRDT 342 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQ-IAMLNARLS 411 L AGANP ++A Q GH Q++ Y WI + A +NA +S Sbjct: 343 SVTLALMAGANPMWVALQHGHS-VQVMMRDYAKWIPSADRGANRAAVNAAIS 393 >UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABG2_CARHZ Length = 371 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 77/378 (20%), Positives = 143/378 (37%), Gaps = 49/378 (12%) Query: 38 SNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ET 96 K+A + A +++++ + F FP+ T E + W + Sbjct: 35 KTKKEAEKVLAEMINKVETNNFI----FPE------------KITLKEFLNYWLENYVRP 78 Query: 97 ELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGR 156 L+ T ++ + I ++ + +R DI Y N S + Sbjct: 79 NLSPTTAYGYEAIINLHIIPFFKNIELQKVRPIDIQQYYN--------------SKRDEL 124 Query: 157 TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG 216 + +T+ + +L FA + I P + V + + K L E L+ + K Sbjct: 125 SGKTLLQHHRILHKAFDFAMKLQLIPNNPIDFVDSPKAKKYKAKILDLKEIKTLLNALKD 184 Query: 217 QSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIR 272 + A+ GLR GEL AL WEDV+ E+G + +RRNL + PK+ IR Sbjct: 185 TDLEVPINLALSLGLRRGELLALKWEDVNWEEGTIQIRRNLVRAGTKLILKEPKSETSIR 244 Query: 273 TVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYS 332 T+ L + L LK K + Y +C + Sbjct: 245 TLKLSKTLLTMLKNHRKKQIELKLMLGNEYKD--------------TGFICCKNNGEMIN 290 Query: 333 VSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 S+ +++ +K+ G+ + RHT A +L + +S++GH T + ++Y Sbjct: 291 PSTFSHQFSDFLKKHGLPDIRLHDLRHTNATLMLKSNIPAKIASSRLGHSTVAITLDLYS 350 Query: 393 MWIDDMNDEQIAMLNARL 410 + DM++E ++ + Sbjct: 351 HVLTDMDEEVANKIDDII 368 >UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH90_9BACT Length = 399 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 90/404 (22%), Positives = 157/404 (38%), Gaps = 55/404 (13%) Query: 7 GVEIRGRYIR--IWFMFRGKRCRETLKGWEITNSN------IKKAGNLRALIVHEINSGE 58 + RG+ R I FMF+G R E + T + + A L + I +I Sbjct: 3 SIRRRGKKARLEIIFMFQGIRRYEQSLYYCETGKDTCKCQDCRSASALLSEIERKIAEKT 62 Query: 59 FEYLRRFPQSS--TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRII 116 F+Y FP S + + F ++W E+ + +T K + + L Sbjct: 63 FKYETYFPDSKYVRENQQLHLNSDMFFDTYAELWLSSIESSVAYSTYKTYSTAVSKLSS- 121 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 +S I+ S I Y + + +T+ NY+ + S+ A Sbjct: 122 YFSRFKLSEIKPSHIQQYISN----------------SELSAKTIANYLGVFHSIFESAV 165 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL---WKFAVYSGLRHG 233 + +S P + VKK + K DP S E + +++ + ++ + Y+G+R G Sbjct: 166 RDDLLSKNPCKHVKKPRVQTEKVDPFSIEEVSMILDWMRQHHPHMTIIFALGFYTGMRVG 225 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 E AL W D+D + + V+R +T + KT A R + ++ E L Q + T Sbjct: 226 EAIALKWSDIDFKHHKIIVQRTITKNRIKESTKT-ADYRVIDIIPMLDEYLHFQKQYTFM 284 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA-RWNAAVKRAGIRRR 352 KSE +P+ ++ + +K G+R R Sbjct: 285 --KSEWV---------------------TVTSYGEPFTKTQNITEDYFKPCLKALGLRYR 321 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID 396 RH+FAC +L A +I + +GH + QM++ YG I+ Sbjct: 322 ILNQMRHSFACMMLDAREEINWIKNMLGHSSLQMLFRKYGNRIN 365 >UniRef50_Q0AUP6 Phage integrase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUP6_SYNWW Length = 392 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 78/397 (19%), Positives = 141/397 (35%), Gaps = 49/397 (12%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 G+R R+ K + T ++A I+ EI SG + + T Sbjct: 26 GER-RQHKKRFTGTK---REANKYLQRILGEIESGSY----------------SDLGNIT 65 Query: 83 FGELCDIWTKIK--ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 + D W T L T++ S + I +++++ + I +Y + Sbjct: 66 IKQYLDKWINAYCTPTNLQPKTIRSYTSTINNHIIPHLGRHKLNNLKAAHIADYYALMSK 125 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD 200 T G + TV + +L L+ A ++ P V+ ++NR Sbjct: 126 SRT-------EGGAGLSPTTVLYHHRILHQALKHAVNQDYLKQNPVAKVQPPRKNRPDIK 178 Query: 201 PLSKTEFNALME-SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 LS + L+ + Q A+ +G+R E+AAL W++VD + ++V L Sbjct: 179 VLSVEQARYLIARYSEEQIYLPVFLALMTGMREAEIAALRWQNVDFDNRTLSVTNALQRQ 238 Query: 260 D---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 + PKT R++ + + + LK++ + +R+ Y Sbjct: 239 ENRLELKEPKTKKSRRSIPVPEQVVVVLKKEKERQDCYREILGEGYDCRG---------- 288 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVK-RAGIRR-RNPYHTRHTFACWLLTAGANPAF 374 VC + Y +G +W V I + RHT A LL+ N Sbjct: 289 ----FVCAWEDGKPYDPEWIGKQWAKLVASDDKIPNGVRFHDLRHTHATILLSQNINLKV 344 Query: 375 IASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 I ++GHE+ +IY + +L S Sbjct: 345 IQDRLGHESIATTGDIYSHVTPGIQQVAADVLENLFS 381 >UniRef50_B8I354 Integrase family protein n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I354_CLOCE Length = 413 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 68/384 (17%), Positives = 138/384 (35%), Gaps = 29/384 (7%) Query: 32 GWEITNSNI-KKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIW 90 +T K+ L E+ SG + T E ++W Sbjct: 36 DPRLTEKQREKELQKQVVLFEEEVKSGSY----------------YEPTKMTMSEFIELW 79 Query: 91 TKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPR 150 K+ + + T + LK + + T I ++ ++N+ L E ++ R Sbjct: 80 LDKKKNNIESKTHQGYSGLLKGRVLKVMGDTKIIDLKPLHLINFYENL--QELGIREDGR 137 Query: 151 SNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNAL 210 K + ++ +Y L ++ + G I P V+ + + + L + + L Sbjct: 138 EGK--LSTNSILHYHRALNAMFGDGVRWGLIKENPCSKVRPPKVVKKEMSCLDEDQIPQL 195 Query: 211 MES---EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL----DMFG 263 + + E + +GLR GEL L W++V+L+ + V + ++ + Sbjct: 196 ISALCNEPIDISTFITLDLVTGLRRGELCGLQWDNVNLKDNTIVVEQAVSYTPETGTIIK 255 Query: 264 PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE-YGRTEKQKLHFVFMPRV 322 PKT + IR +T+ + + L K + + + EK + + Sbjct: 256 TPKTKSSIRKITIPKTTSDLLSIYRKWWLEQKIKVGDQWQKSAREEVEKNGQTWEDPEYL 315 Query: 323 CNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHE 382 +L + +KR + + RHT A L+ AG N +A++MGHE Sbjct: 316 FTTWDGYVMHPDTLTKTFKKFIKRNNLPDIRLHDLRHTAATMLIHAGLNIRAVAARMGHE 375 Query: 383 TAQMVYEIYGMWIDDMNDEQIAML 406 + IY + + + ++ Sbjct: 376 NPNVTLAIYSHALLSADKQAADVM 399 >UniRef50_B7IY65 DNA integration/recombination/invertion protein n=35 Tax=Bacillus RepID=B7IY65_BACC2 Length = 369 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 70/390 (17%), Positives = 137/390 (35%), Gaps = 49/390 (12%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR ++ G+ K+A A + E+N G F T Sbjct: 25 GKRRQKWFSGY----KTKKEAQADVAKKITELNEGTF----------------IEPSKVT 64 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 + + W +IK + +T ++ + I + + I ++ Sbjct: 65 LKDYLNHWLEIKSMSIQKSTFAGYRAFINQHVIPSIGMVALHKLNVMHIQKCYKTAIN-- 122 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 KG T ++ +L S L A + IS P + + ++ + Sbjct: 123 -----------KGITNNSILLMHRILKSALNLAVKQNIISRNPADFAEIPKKEKTSIQTW 171 Query: 203 SKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM 261 ++ E + + ++ + A+ +G+R GE+ L W+D+D EK V + + + Sbjct: 172 TEEEVKKFLAHSQESRYHIGYLLAITTGMRLGEVLGLRWQDIDFEKHTVTINQTSGHDNK 231 Query: 262 FGPP-KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMP 320 KTN+ RT+ + + ALK+ L + + Y + Sbjct: 232 IKKTAKTNSSKRTIPVPNETIVALKKHKILINKEKLRFGSAYLDQ--------------D 277 Query: 321 RVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMG 380 + + + + A + GI+ + RHT A LL G NP I+ ++G Sbjct: 278 LINCNEFGRIIKRAHFRKSFIRATHKVGIKEIKFHDLRHTHATILLKQGVNPKIISERLG 337 Query: 381 HETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 H M +Y + +M +E + + Sbjct: 338 HTDISMTLSVYSHVLPNMQEEAVKNFGKSI 367 >UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase family n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z6H5_DEHE1 Length = 386 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 74/390 (18%), Positives = 134/390 (34%), Gaps = 52/390 (13%) Query: 29 TLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCD 88 L +E N K A ++H+ +SG F T E Sbjct: 27 YLSHYETVKGNKKAAEKRLNELIHQFDSGTFV----------------KPGKSTMYEYMQ 70 Query: 89 IWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLD 147 W + L+ T++ I + PI ++ + + + Sbjct: 71 SWLNDYCKPNLSPRTVELYSYISTKHIIPTLGNIPIVELKPQHLQHLYADKQSF------ 124 Query: 148 NPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEF 207 G + RTV +L L+ A ++G +S E V + R + +++++ Sbjct: 125 -------GLSNRTVQIIHVVLHKALKNAVKTGLLSRNIAEAVDAPKIQRHEMQVMNESDM 177 Query: 208 NALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD------ 260 L+E K L+ ++++G+R E AL W D+DL V V R++ + Sbjct: 178 QVLLEKAKETPYYALFYTSLFTGMRRAECLALRWSDIDLILCQVYVLRSMQYVQDADLGK 237 Query: 261 --MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVF 318 F PKT+ R + L + L+E Y+ RK+ VF Sbjct: 238 RITFKEPKTSKSRRQIALSPSNVIILREHYQDQSELRKT--------LNLPGLTDSDLVF 289 Query: 319 MPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQ 378 +S+ W +R G+ + RHT A LL G +P + + Sbjct: 290 SHY-----DGSPLLPNSVTHAWIKLARRCGLNGIRLHDARHTHASLLLKQGVHPKIVQER 344 Query: 379 MGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 +GH + Q+ + Y + + + Sbjct: 345 LGHGSIQITLDTYSHVAPGLQQAAASKFDD 374 >UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MP49_ANATD Length = 373 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 129/340 (37%), Gaps = 36/340 (10%) Query: 79 VIKTFGELCDIWTKI-KETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNE 137 KTFGEL D+W + ++ +T + S + ++ + D+ Y Sbjct: 59 EQKTFGELLDLWLNTVAKNRVSLSTFQSYSSSIALHIKPFLGDVELNKLTAMDLQKYYQH 118 Query: 138 LLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI 197 + + +KG + + ++ L +A + I P + V ++ Sbjct: 119 I------------TGEKGLSSTLALYHHRIIHQALDYAVRMNMIEKNPADYVDPPRKRSY 166 Query: 198 KPDPLSKTEFNALMESEKGQSQNLW---KFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 +P + ++ + N+W A+Y+G+R GE+ AL W+D++LE+G + V + Sbjct: 167 QPSIWDEDTIKRALDIFRNT--NIWVPVLLAIYTGMRIGEITALKWDDINLEQGYIVVSK 224 Query: 255 NLTILDMFGPPK----TNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 L ++ K + R V + +E LK+ + +++ YH E Sbjct: 225 TLMKINRQLYIKEKGENKSSYRIVAISSNVIEELKQWRRKQEQYKEKLKELYHNEG---- 280 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 VC + + + +++ G+ + + RHT A LL G Sbjct: 281 ----------FVCTFEDGRVQDPKYITKVFQKTIEKHGLPKIRFHDLRHTHASLLLKHGV 330 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 +P I+ ++GH T IY D+ + L Sbjct: 331 DPKHISDRLGHSTITTTLNIYSHVFDEKRRKVAETFEDIL 370 >UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MR26_ANATD Length = 400 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 81/424 (19%), Positives = 150/424 (35%), Gaps = 55/424 (12%) Query: 4 LPTGVEIRGRY-IRIWFMFRGKRCRETLKGWEITNSNIK--KAGNLRALIVHEINSGEFE 60 +PT + RG I+ G C + G + + G R + +I Sbjct: 1 MPTKTKKRGNNEGSIYKRKDGLWCGQITIGRDENGRQKRQYFYGKTRQEVAEKIAK---- 56 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICE 119 + + T + + W + K+ L +T K ++ Sbjct: 57 -----TLNDLANGVYVDPAKTTLKDWLNTWLWEYKKQTLRPSTFKDYLCYIERHINPAIG 111 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + +R + N ++G ++ T+ +L S L A ++G Sbjct: 112 HYKLKDLRPEHLQALYNA-------------KYQEGLSISTIKQIHTVLHSALDQALKNG 158 Query: 180 FISTKPFEGVKKLQ-RNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAA 237 ++ E + + + + LS E + + +G+ + + + SGLR GEL A Sbjct: 159 LVNRNVSEATTLPKGKPKREIRILSLEEQQRFIAALEGERLKTAFLVELASGLRIGELLA 218 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFG------------PPKTNAGIRTVTLLQPALEALK 285 L W+DV+ + G + VRR+L + +F PKT AG R V L +E LK Sbjct: 219 LRWKDVNFKDGYIEVRRSLQRVRIFDGGNSKKTALAFQEPKTEAGKRIVPLPPVIIEELK 278 Query: 286 EQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVK 345 + K + Y + VF + + + + Sbjct: 279 QHRKKQLEEKLKAGALY---------EDNDLVFATELGT-----PIDPRNFERLFYRIRE 324 Query: 346 RAGIRR-RNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIA 404 +AG+ + N + RHT+A LL A +P + +GH+ IY + ++ Sbjct: 325 KAGLDKSVNFHALRHTYATRLLEANEHPKVVQELLGHKDISTTLNIYSHVMPEIKKAAAM 384 Query: 405 MLNA 408 LN+ Sbjct: 385 KLNS 388 >UniRef50_Q7N1I7 Similar to bacteriophage integrase n=8 Tax=Enterobacteriaceae RepID=Q7N1I7_PHOLL Length = 352 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 98/379 (25%), Positives = 156/379 (41%), Gaps = 52/379 (13%) Query: 33 WEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTK 92 E+T NIK A I ++I F Y FP SS +T + D + K Sbjct: 1 MEVTPKNIKYAERKLGEIYNKIERDIFIYAEFFPNSSRLKIFGNVNKGRTIKDYLDEYLK 60 Query: 93 IKETE-LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRS 151 I ET L+ +T+ K + P+ + + + + Sbjct: 61 ICETRNLSPSTINGYKKC--KTALSELHKIPVVELTPAILKTWIQ--------------- 103 Query: 152 NKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP--------DPLS 203 K+ ++T+ N ++ L S + A IS P V + + DPLS Sbjct: 104 -KRSTALKTIRNNLSFLRSAIDEAVTDCLISMNPVNLVTASRYQTERIENDSEYIVDPLS 162 Query: 204 KTEFNALMESE---KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 E AL+ + + Q +NL+ FA+++GLR EL AL W+D+D +V ++ ++ Sbjct: 163 PNEVTALLSAAGNKQKQWENLFLFAIHTGLRSSELCALRWQDIDFIGKTAHV-QSAKVVG 221 Query: 261 MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMP 320 + KT AG R V L A+ AL Q T K + F + G Sbjct: 222 IIKGTKTKAGTRKVELNTDAMSALLNQKAFTFM--KGNVIFEDPKTGEAWAGADAI---- 275 Query: 321 RVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMG 380 W +++AGIR RNPY TRHTFA ++ G N ++A+QMG Sbjct: 276 ---------------RKKAWVPTLRKAGIRYRNPYQTRHTFATKHISQGVNLFWLAAQMG 320 Query: 381 HETAQMVYEIYGMWIDDMN 399 H+ +M++ YG ++ D + Sbjct: 321 HKGPEMLFRHYGSYLKDYD 339 >UniRef50_Q2T7M7 Bbp50 n=13 Tax=root RepID=Q2T7M7_BURTA Length = 356 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 99/386 (25%), Positives = 154/386 (39%), Gaps = 52/386 (13%) Query: 35 ITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK 94 T +N+K A L I I G F + FP+ T ++ G+ D W + Sbjct: 2 PTPANVKYARRLAIEIRSRIRHGTFSMVEYFPEDGTTTSLL-------LGDWLDRWLAAQ 54 Query: 95 ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN----ELLHGETLYLDNPR 150 E +T + +K + D+ R + +T+ + Sbjct: 55 RIE--KSTKDGYTTAIKFWKE-----------TPRDLGQTRPLGGVSIKSLKTIDIQTAV 101 Query: 151 SNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNAL 210 +N+ T +T++NY+++L S L A + I P + V + + PDP S E N++ Sbjct: 102 ANRPDLTGKTINNYLSVLRSALSLAVKDKLIVESPADAVPPAKHQKQPPDPFSAEESNSI 161 Query: 211 MESE----KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPK 266 + GQ N+ +F ++GLR E+ L W VD G + + + + K Sbjct: 162 IACAERSYPGQVHNVTEFWFWTGLRTSEIYGLEWPHVDFASGTLLIAKAFVRGEQMDRTK 221 Query: 267 TNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGK 326 T R V L AL AL+ Q T + F+ Y + F Sbjct: 222 TKVA-RLVILNSRALAALQRQRAFTQMA--NGRVFHDPRYNEGWADEDAF---------- 268 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQM 386 W +KR GIR R PY+ RH++A +L AG PAF A Q+GH +M Sbjct: 269 ---------RRTYWEPMLKRLGIRYRRPYNMRHSYATAMLMAGMTPAFCAKQLGHS-VEM 318 Query: 387 VYEIYGMWID-DMNDEQIAMLNARLS 411 Y WID D ND ++A L +S Sbjct: 319 FLTTYSKWIDGDQNDLEMARLERAIS 344 >UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=10 Tax=Bacillus anthracis RepID=C3L682_BACAC Length = 374 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 71/395 (17%), Positives = 142/395 (35%), Gaps = 54/395 (13%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR ++T G+ K+A ++H+ N+G + F T Sbjct: 25 GKRKQKTASGF----KTKKEAERACNELIHQFNTGSLVDDKNF----------------T 64 Query: 83 FGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 E W + + + T K + + I + S + ++ + L+ Sbjct: 65 LSEYLQEWLENTAKQRVRETTFTNYKRAINSRIIPVLGSHKLKDLKPLHGQRFVKSLID- 123 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 +G + ++ +L L A + + PF+ V+ + ++ Sbjct: 124 ------------EGLSPAYIEYIFIVLKGSLEDAVRWELLFKNPFQHVEIPRPRKVVNST 171 Query: 202 LSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 S E + K + +L+ A+ +G+R GE+ L W++ DL +G ++V L Sbjct: 172 WSIEETKKFLNRTKFENVIYYHLFLLALNTGMRRGEILGLKWKNFDLNEGKISVTETLIY 231 Query: 259 LD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLH 315 + F PKT+ R +++ Q + K + Y + Sbjct: 232 DENGFRFTEPKTHGSKRLISIDQNLCKEFKSYKAKQNEFKLLFGQSY---------EDND 282 Query: 316 FVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFI 375 VF ++ +N +K+A + + + RHT A LL G NP + Sbjct: 283 LVFAKET-----GQPILPRTMTTTFNQFIKKADVPQIRFHDLRHTHATILLKLGINPKIV 337 Query: 376 ASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + ++GH + + + Y DM + + L+ L Sbjct: 338 SERLGHSSIKTTLDTYSHVTIDMQESAVLKLSEAL 372 >UniRef50_A8L4Q7 Integrase family protein n=9 Tax=Actinomycetales RepID=A8L4Q7_FRASN Length = 477 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 69/394 (17%), Positives = 134/394 (34%), Gaps = 53/394 (13%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR R+T+ G K+ + G T +T Sbjct: 113 GKRSRKTVYG-----KTEKECREKLTKVQRAAELGV----------------NVTAERRT 151 Query: 83 FGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 W IKE + +T++ + + + + + + D+ Sbjct: 152 VAVWLGEWLDIKEGDGTRASTLRAYRWLINMHIVPVIGRVQLDKLTPLDVRRLVAS---- 207 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 + K G + +V + +L+ + L A + ++ + VK + Sbjct: 208 ---------AKKSGLSAGSVRHVHSLIRNALAEAERLDLVARNVAKAVKAPPTPHREVRA 258 Query: 202 LSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 L E L+E +G+ + ++ + GLR GE+ L W DVDL+ ++VR+ L +D Sbjct: 259 LRPEEARRLVEVLRGERLEAVFACGLMLGLRRGEILGLRWSDVDLDGATLHVRQTLQRVD 318 Query: 261 ---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 MF P KT R + + + L+ R + + V Sbjct: 319 GSLMFVPAKTERSHRRLPIPPKLVTILRRHRATQTAERTGLGDAWT---------ETGLV 369 Query: 318 FMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 F + ++ R++ ++AG+ + RH FA L G + Sbjct: 370 FTSSIGT-----PLEPRNVNRRFDVLRRQAGLPWLRLHDLRHAFASMLFAEGVPARTVME 424 Query: 378 QMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 +GH T Q+ Y + + + + L+ + Sbjct: 425 LLGHSTIQLTMNTYTHVMPETQRDAVGRLDRIFN 458 >UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridia RepID=A4XMZ7_CALS8 Length = 327 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 132/340 (38%), Gaps = 43/340 (12%) Query: 83 FGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 + + W + K+ L +T + +S + + + +R + N Sbjct: 3 VKDWLNTWLWEYKKQTLRPSTFQDYESLINNHIVPSIGHYKLKDLRPEHLQALYNS---- 58 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ-RNRIKPD 200 ++ G ++ T+ + +L S L A ++G + E + + + + Sbjct: 59 ---------KHESGLSLSTIKHIHVILHSALDQALKNGLVVRNVSEATTLPKAKTKKEIR 109 Query: 201 PLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 L+ E + + +G+ + + A+ SG+R GEL AL W+ V+L++G + ++R+L + Sbjct: 110 VLTLEEQKRFVAALEGERLKPAFLLALASGVRLGELLALKWDCVNLKEGTITIKRSLRRI 169 Query: 260 DM------------FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG 307 F PKT AGIRT+ + LE LKE K + + Y Sbjct: 170 KTYDKSLPTKTMLAFQEPKTAAGIRTIPVPPVILEELKEHRKRQLEEKLKAGSLY----- 224 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLT 367 + + VF + + + +++A + N + RHT+A LL Sbjct: 225 ----EDNNLVFATELGT-----PIEPRNFLRVFYRIIEKANLD-INFHALRHTYATRLLE 274 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 A +P + +GH IY + ++ LN Sbjct: 275 ANEHPKVVQELLGHNDISTTLNIYSHVMPEIKKAAAMKLN 314 >UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KXE0_THERP Length = 316 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 79/320 (24%), Positives = 130/320 (40%), Gaps = 32/320 (10%) Query: 94 KETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNK 153 + T L T +S ++ I P+ + + + ++LL Sbjct: 5 RRTSLRPRTWAGYESIVRVRIIPALGRLPLDKVEPQVLQAFASQLLT------------- 51 Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES 213 +G +V++V N LL A + G + P + V + +R++ L+ E L+ + Sbjct: 52 QGLSVQSVQNTHPLLHRPFADAVKWGLLGRNPCDLVDLSRASRLQLRALTAPEVARLLAT 111 Query: 214 EKGQSQ-NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG----PPKTN 268 L AV SGLR EL AL W D+D E+ +V R+L + G PPKT Sbjct: 112 CADDPLGPLVTVAVLSGLRLRELLALQWGDIDWERSEPSVVRSLQRVRGQGLVVVPPKTA 171 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 A R V L ALEAL+ Q + R + + + +VF + Sbjct: 172 ASRRRVPLSPLALEALRRQRRHQVEWRLAAGPTWA---------EGDWVFTSV-----RG 217 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 + R++ ++RAG+ R + RHT A LL G +P +AS +GH T Q+ Sbjct: 218 VPLDPAETTRRFHRLLERAGLPHRRFHDLRHTTASLLLADGVHPKVVASILGHSTVQVTL 277 Query: 389 EIYGMWIDDMNDEQIAMLNA 408 ++Y + + L Sbjct: 278 DVYSRVTPGLARQAAERLQQ 297 >UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53_CLOPE Length = 400 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 71/390 (18%), Positives = 134/390 (34%), Gaps = 53/390 (13%) Query: 36 TNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE 95 T G + + ++ + ++ G ++ T T + W Sbjct: 40 TPKRKSFTGKTKKEVSDKMK-------DFYVDNNRG--LLPTDDKITLSKWFYTWLFTYR 90 Query: 96 TE-LTTNTMKKTKSQLKTLR-IIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNK 153 L ++ ++ + + + +R I Y N L+ E Sbjct: 91 IHDLKPSSFERYEGLYRNYIESSSIGKIKLMDLRTHHIQAYYNSLVSEER---------- 140 Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ---RNRIKPDPLSKTEFNAL 210 ++ T+ L S L A + G+I+ + + + + + E Sbjct: 141 --KSPSTIKTINKCLKSCLNQALKEGYITKNYCTLITLPKGSESPKEIINIFTLEEQQTF 198 Query: 211 M-ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP----- 264 M E ++ L+ A+ +GLR GE+ AL W D++ + +++ + + Sbjct: 199 MKECMNNKNGMLYILALGTGLRLGEILALKWTDINFKNNYIDINKAIKSTYKIDSKGNRE 258 Query: 265 -------PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 PKT IRTV L +E L++ K R S I Y + V Sbjct: 259 FQIIEQQPKTKNSIRTVPLNDNLIELLQQHRKKQMIDRDSNIEIYF---------DNNLV 309 Query: 318 FMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 F + N Y + S++ + + + ++ + RHTFA L G P + + Sbjct: 310 FSTPIGN-----YLNESNVRKTFKRILNKCNLKELRFHDLRHTFATRLFENGVPPKTVQT 364 Query: 378 QMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 +GH IY + D D+ I LN Sbjct: 365 ILGHSDISTTLNIYTHVMKDTKDKAIDKLN 394 >UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B8Q2_CLOBO Length = 366 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 76/375 (20%), Positives = 137/375 (36%), Gaps = 51/375 (13%) Query: 41 KKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELT 99 K+ A ++++I G + T T E + W + + + Sbjct: 38 KECEAALAELINQIEKGS----------------IITNDKMTVKEYIEYWLETYPKNNCS 81 Query: 100 TNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVR 159 +T K+ K +K + I +S + I + +LL + + Sbjct: 82 PSTYKRYKFFIKDIINYI-GKHKLSKLNPMIIQKFYEDLLSDRNI------------SNN 128 Query: 160 TVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS- 218 TV +L L+ A Q I+ P + V + + + E N ++ K + Sbjct: 129 TVIKTHRMLHLALKHAQQWQLINNNPCDLVTPPKATKQEMKYWQPDEINIYLDILKEEFL 188 Query: 219 QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVT 275 A+ +G R GEL A+ W DVDL + + + L +D PKT IRT+T Sbjct: 189 YPAIFLAIQTGCRVGELCAIKWSDVDLIDKTIRIDKTLQRIDCKLALKYPKTQNSIRTIT 248 Query: 276 LLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSS 335 LL+ A+ LK K R EK+ + + + V + Sbjct: 249 LLETAITFLKNLKK-----------------NRIEKKLKYGIELDYVLCWEDGRPIDPHY 291 Query: 336 LGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 + + + + + + + RH+ A LL AG N I+ ++GH T + Y Sbjct: 292 ISQHFPKLLDKYNLPKIRFHDLRHSHATLLLKAGVNAKIISKRLGHSTVAFTLDTYSHVS 351 Query: 396 DDMNDEQIAMLNARL 410 M E+++ + L Sbjct: 352 TKMQKEEMSKVENLL 366 >UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8K7_9ACTO Length = 377 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 81/377 (21%), Positives = 143/377 (37%), Gaps = 42/377 (11%) Query: 40 IKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWT--KIKETE 97 + +G +A + ++ + A T + WT + ++ Sbjct: 35 REVSGRTQAEVRAKLRE---------LRERVEAGAPVKDASITMAAWLEDWTTKALPASD 85 Query: 98 LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRT 157 T+ + ++ + S P+ +R S++ + G + Sbjct: 86 RKQATIDLYATIARSHLVPKLGSLPLDRLRPSNVEALV-------------LAKRRAGLS 132 Query: 158 VRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ 217 +V A+L + L A + G I P VK+ R LS + AL+E+ +G Sbjct: 133 ASSVRTIYAVLRAALDVAVRDGLIQRNPAALVKRPAVERKDAGYLSAQQAEALLEAVRGD 192 Query: 218 S-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRT 273 + L++ + +GLR GE AL W DVDL+ +V VR L+ G PKT RT Sbjct: 193 RLEALYRVMLATGLRRGEALALHWRDVDLDAAVVRVRWTLSRTSAGLELGEPKTEKSRRT 252 Query: 274 VTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSV 333 V L PA+E L+ K + + + + Q VF + Sbjct: 253 VPLPVPAVETLRAHRKRQAAEQLAAGSLW---------QASGLVFTSEIGT-----PLEP 298 Query: 334 SSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGM 393 ++ R+ A +RAG+R + + RH+ A +LL AG + + +GH + + +IY Sbjct: 299 RNVLRRFEALAERAGLRGVHLHTLRHSAASFLLAAGTHTKVVQEHLGHSSYAITADIYSH 358 Query: 394 WIDDMNDEQIAMLNARL 410 E L + Sbjct: 359 VAPAQQREAADKLGQAI 375 >UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RA80_AMMDK Length = 383 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 74/340 (21%), Positives = 130/340 (38%), Gaps = 26/340 (7%) Query: 77 TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 T E W ++ +L+ T ++ ++ I P+ + + + + Sbjct: 63 DPEKVTLAEYLKEWHAARKHKLSLRTWERYGQLIEHWLIPHLGGIPLRKLSPVHLEKFIS 122 Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 +L + L K + TV + +L LR A + I P E V K ++ R Sbjct: 123 AMLEADRL------DGKGKISPTTVRHAALVLNKALRDAVKKRLIPYNPMEAVDKPRKAR 176 Query: 197 IKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV--- 252 +P L + E LM + +G AVY+G R GE+ L W DVD E G + + Sbjct: 177 KEPPALKEGELRRLMSAAEGTYLYAPITLAVYTGARLGEILGLRWRDVDFEAGCIFILQA 236 Query: 253 -RRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 +RNL F PKT R + + L AL++Q KL + + + Sbjct: 237 LKRNLKGELYFDEPKTPRSRRRIEIGPACLAALRKQKKLQAEWKLKAGSAWQE------- 289 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 VC + + + + + GI N + RHT A LL AG + Sbjct: 290 -------TGLVCTREDGSPIDPHAFSSAFRKLASKLGID-ANFHALRHTHATMLLKAGVH 341 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 ++ ++GH + + ++Y + M ++ L+ Sbjct: 342 LKIVSERLGHASVAITGDLYSHVLPGMQGGAAQLVEEELN 381 >UniRef50_C2RY84 Prophage LambdaBa04, site-specific recombinase, phage integrase n=4 Tax=Bacillus cereus group RepID=C2RY84_BACCE Length = 378 Score = 241 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 74/395 (18%), Positives = 143/395 (36%), Gaps = 54/395 (13%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR ++T+ G+ K+A ++H+ N+G T Sbjct: 25 GKRKQKTVSGF----KTKKEAERACNELIHQFNTGSLV----------------DDKNLT 64 Query: 83 FGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 E W + + + T + + + I + S + ++ + L+ Sbjct: 65 LSEYLQEWLENTAKQRVRDTTFINYRRAVNSRIIPVIGSHKLKDLKPLHGQRFVKSLIDE 124 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 E + + ++ +L L A + + PFE V+ + ++ + Sbjct: 125 E-------------LSPKYIEYIFIVLKGALEDAVKWELLYKNPFEHVEIPRPRKVVNNT 171 Query: 202 LSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 S E + K +L+ A+ +G+R GEL L W++VDL +G V+V L Sbjct: 172 WSIEETKTFLTYAKFDNPIYYHLFLLALNTGMRRGELLGLKWKNVDLVEGKVSVTETLIY 231 Query: 259 LD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLH 315 + F PKT+ R +++ Q + LK + + Y + Sbjct: 232 DELGFRFTEPKTSGSKRLISIDQSLCKELKSYKAKQNEFKLAIGKAY---------EDND 282 Query: 316 FVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFI 375 VF + + +L + +K A + + + RHT A LL G NP + Sbjct: 283 LVF-----SREDGRPIYPRTLTTVFERFIKTAQVPKIRFHDLRHTHATLLLKLGINPKIV 337 Query: 376 ASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + ++GH + + + Y DM + L+ L Sbjct: 338 SERLGHNSIKTTLDTYSHVTLDMQESATIALSEAL 372 >UniRef50_D2BJR0 Site-specific recombinase, phage integrase family n=2 Tax=Dehalococcoides RepID=D2BJR0_DEHSV Length = 385 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 71/390 (18%), Positives = 139/390 (35%), Gaps = 50/390 (12%) Query: 33 WEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTK 92 W+ A A +++ N+G F T G + W + Sbjct: 32 WQTVKGTKSHAEKELAALINRKNNGSFV----------------KPTKTTVGTFLESWLE 75 Query: 93 IKET-ELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRS 151 + T ++ ++ ++ +R I Y ++ L R Sbjct: 76 TYASCNTAPRTFERYSQIVRLHLTPNLGRIELTQLRPEHIQAYYSK-------ALSGGRV 128 Query: 152 NKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM 211 + G + +TV ++ +L L A + G ++ V + + + ++ + + L Sbjct: 129 SGGGLSAQTVKHHHRVLSEALNHAVKWGLLARNVAMAVDPPRPEKREMHTIAPEDMSVLF 188 Query: 212 ESEKGQSQN-------LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---- 260 E +N ++ A+++G+R GE+ AL W D+DL K + VR +L L Sbjct: 189 EEAAKMEKNSGLPYELIFMTALHTGMRRGEILALRWSDIDLAKSKIYVRCSLQCLKNGEI 248 Query: 261 MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMP 320 + PKT R V++ LE L + + + + + VF Sbjct: 249 IIREPKTPGSRRLVSMTPSLLEKLIIHKESSSANMILQGKTLQGD---------SLVFAH 299 Query: 321 RVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMG 380 + +++ + KRAG+ + RH+ A +LTAG +P ++ ++G Sbjct: 300 FDGT-----PINPNTVSPAFAKIAKRAGL-NLRLHDLRHSHATLMLTAGVHPKIVSERLG 353 Query: 381 HETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 H T + Y I + D L Sbjct: 354 HSTVAFTLDTYSHVIPGLQDAAAKTFEKSL 383 >UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1P6_HALOH Length = 391 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 64/337 (18%), Positives = 126/337 (37%), Gaps = 24/337 (7%) Query: 76 TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 + + W + +++ L +T + K + T + ++ + Sbjct: 63 SEPSEMKLIDWLHRWIEGRKSTLAYSTYRNYKVMINNHLADDIGETKLKDLKARQVQELL 122 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 N+ L +Y + G + RTV + L + L A + I + V+ ++ Sbjct: 123 NDKLEKGKVY------GEGGLSPRTVKYIYSTLHTALEQAVKENMIPRNICKAVEVPKKQ 176 Query: 196 RIKP-DPLSKTEFNALMESEKGQSQNLWK-FAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 K +K + N +++ + + A+ +G+R GEL L W+D+D+EK + V+ Sbjct: 177 EEKKLHTWNKKQVNIFLKAARDYKYFILHYLALNTGMRRGELLGLQWKDIDMEKKRIEVK 236 Query: 254 RNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 R L D +F KT +G RT+ + + LK G R + Y++ Sbjct: 237 RQLARTDEGLIFKKVKTKSGNRTIPITDNVVRELKRHQIKQGEKRLALGEAYNK------ 290 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 K V + N +L + ++ G+ + RHTFA L A Sbjct: 291 --KADLVASNGIGN-----PIDPRNLVRDFKDIIEETGLPEIRYHDLRHTFATLFLEAKG 343 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 + +GH + + + Y ++M E + Sbjct: 344 PIKTLQQILGHSSITVTIDTYSHVTEEMLIEAERKME 380 >UniRef50_B6BNI8 Phage integrase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNI8_9PROT Length = 347 Score = 240 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 86/395 (21%), Positives = 160/395 (40%), Gaps = 54/395 (13%) Query: 17 IWFMFRGKRCRETLKGWEITNSNIKKAG-NLRALIVHEINSGEFEYLRRFPQSSTGAKMV 75 I F + KR R +LK + T +N K A L IVH++N +F + Sbjct: 3 ITFYHQSKRYRRSLK-LDDTKANRKLAESKLIPEIVHKLNQDKF------------LENT 49 Query: 76 TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 + + T E I +I E + K K + I I I+ S+I ++ Sbjct: 50 NVKKVPTVDEFMQISFEIHEAYRRPLSQKDYKFIYERHIKPIFGKRIIDEIKPSEIATWQ 109 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 ++LL K + +++ +A+ + A I+ P +KK + Sbjct: 110 SKLL--------------KKLSTKSLTMILAVFNVMFNDALADELIARNPMSLIKKPKNI 155 Query: 196 RI-KPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 + + P + E L+ + + + ++ ++G+R GEL AL W D+D E I+ VRR Sbjct: 156 SVNEILPFKQDEIFKLLGHIQERMRAVFAIGFFTGMRTGELVALKWSDIDFENNIIKVRR 215 Query: 255 NLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL 314 ++ PKT + IR + ++ L L+ K + H+ Sbjct: 216 A-KRQNVESLPKTKSSIRDIDIIDILLPYLQNHLKFKLDDSEYMFNSLHK---------- 264 Query: 315 HFVFMPRVCNGKQKPYYSVSSLGA-RWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPA 373 +P+ S+ W ++ I RNPY RHTFA +++ G + Sbjct: 265 -------------RPFTCFHSISRTYWRPIFEKIDIAYRNPYQMRHTFASMMISNGEDIL 311 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 +++ +GH + + +Y +I++ + ++ A L A Sbjct: 312 WVSKMLGHTNSAITLTMYARYIENKDKKRGAFLIA 346 >UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WV14_HALHL Length = 384 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 87/414 (21%), Positives = 153/414 (36%), Gaps = 46/414 (11%) Query: 5 PTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRR 64 P GV ++ G+R RET G T N ++ I EI G F+Y Sbjct: 8 PNGV------LQYDLCLYGRRFRET-SGLRDTPENRRRIRRDLRRINAEIEMGTFDYAAW 60 Query: 65 FPQSSTGAK-------MVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 FP S A+ + + FG W ++ + + ++ L+ I Sbjct: 61 FPNSRKLAEAQRWLREQGSRAPDQRFGPYAWQWYQLHLGDWKESYARRVCGVLEGYLIPH 120 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 P+ I + +R+ELL ++ + ++ + L ++RFA + Sbjct: 121 FGEWPLDQITERAVRAFRHELLELTNA------RGERRLSNARINFILTPLAGVMRFA-E 173 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAA 237 S P ++ L+ +R P PL+ + +A + + +K Y+GLR E+ Sbjct: 174 SELGIEHPMRQIRPLRDDRDDPMPLTAEQVHAFLAAVDPDYYLYFKLRFYTGLRSCEVDG 233 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 L VDLE+ + VR + K R + L L + Sbjct: 234 LKVCYVDLERRQLRVREAR-VDGRQTTLKHRKTRRDIPLSPGLAAELDRHIRG------- 285 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 +Q +VF +P + W +K G+ R Y T Sbjct: 286 -------------RQGDDYVFTRS----DGRPLHPSWVAEQVWKPTLKALGLAPRRVYQT 328 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A L AG NP F++ +GH + +M++E Y ++ + + + A ++ Sbjct: 329 RHTAAVLHLAAGENPLFVSRLLGHSSTKMLFERYAPFVANALGDDGSAFEAMMA 382 >UniRef50_A7VZ12 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VZ12_9CLOT Length = 414 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 75/388 (19%), Positives = 144/388 (37%), Gaps = 51/388 (13%) Query: 18 WFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTT 77 ++ + KR + + N +KA I + A++ Sbjct: 30 YYDSKNKRHVKYISTGLPEKGNKRKAEAELVKIRNAFE--------------PPAEIGEL 75 Query: 78 RVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPIS--HIRYSDILNYR 135 F + W +I + + T +S +K + PI+ + I + Sbjct: 76 CSNMLFADYLLGWLEIVKVRVKPTTFGSYESMVKQTIEPYFRNKPITLKDLEARHIQQFY 135 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 +E L +V +Y A++ L++A ++ ++ V + ++N Sbjct: 136 SEKLKTVK--------------PNSVIHYHAVIHQALKYAMKTDLVAQNVAMKVDRPKKN 181 Query: 196 RIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 +P L E L + KG L A + GLR GE+ L W+ +D E+G + ++R Sbjct: 182 DFQPVFLDAAELQHLFDVVKGTKLELPVLVAAFYGLRRGEVLGLKWDAIDFERGTLTIKR 241 Query: 255 NLTILDMFGPP--------KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 +T +++ G KT + +RT+ L+ E E +++ Y+ EY Sbjct: 242 TVTSVNVGGKTQVIEQESAKTKSSMRTLPLVGRFREYFAEVKAAQELNKQVCGNCYNYEY 301 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 FVF+ + + Y L +++ A ++R G+++ + RH+ A LL Sbjct: 302 -------DGFVFVDELGERMKTDY-----LTSQFPAFIQRHGMKKMRFHDLRHSCASLLL 349 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMW 394 G I +GH IY Sbjct: 350 ANGVPLKQIQDWLGHSDFSTTANIYAHL 377 >UniRef50_A5N1F6 Integrase-related protein n=3 Tax=Clostridia RepID=A5N1F6_CLOK5 Length = 416 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 67/341 (19%), Positives = 126/341 (36%), Gaps = 15/341 (4%) Query: 82 TFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 TF E W K E EL T+ + K L T I ++ ++ + I + + L Sbjct: 70 TFEEFIKKWLKDYAEAELAPKTLYRYKELLYTRIIPALGHIKLNKLQPTHITEFYSNLRE 129 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD 200 P G + RT+ ++ L+ S+L A Q GFI P +K + + + Sbjct: 130 DGIRNDGKPG----GLSERTILHHHRLISSILATAIQWGFILNNPALRLKAPKVEKKEAR 185 Query: 201 PLSKTE---FNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT 257 + E L+E+E + + + A+Y G+R GEL AL W D++ + + + ++L Sbjct: 186 HFNIEETAYVLQLIENEPIKYKTMITLAIYGGMREGELTALTWSDINFDDCTIKINKSLQ 245 Query: 258 I---LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL 314 D F R +++ + LKE + + +H Sbjct: 246 HLPGRDTFIKSTKTETTRLISIPISVMTLLKEYKRWQNTEKLKLGNLWHDSDALFTATDG 305 Query: 315 HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG----IRRRNPYHTRHTFACWLLTAGA 370 +F + K + + + ++ N + RHT A L+ G Sbjct: 306 KSIFPSTISKWFLKFIRKHNESIINDDKIPPKDKSKYLLKEVNFHGLRHTSATLLINQGV 365 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + ++ ++GH +IY + + E L + Sbjct: 366 DITTVSKRLGHARTSTTTDIYSHSLQKADVEAADKLENLFN 406 >UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WVH7_ALIAD Length = 391 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 71/336 (21%), Positives = 124/336 (36%), Gaps = 38/336 (11%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T E W K + L T + L+ + PIS I I +L + Sbjct: 71 TLHEWASRWFADKSSSLRPWTRRTYHHVLQAYILPELGKMPISKIEARHIQALYRKLSNR 130 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 TV +L + L A ++G++ PF V+ + Sbjct: 131 --------------LKPVTVHRIHRVLKTCLLAAVKAGYLDKSPFLNVEPPEHKTPPKPV 176 Query: 202 LSKTEFNALMESEKGQSQNLWK---FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 LS + L+ + + A+++G+R GE+A L W D+DL+ G++ + R Sbjct: 177 LSVNDAFRLLAWLREHRPTSYMAAFLAIHTGMRMGEIAGLQWRDIDLDTGVIQLERTRYR 236 Query: 259 ----LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL 314 D GPPKT R + + + ++ L+ + + T Sbjct: 237 PKGGQDFLGPPKTFGSRRRIVVTREVVDELRRWKQSQQEIERESWTPES----------- 285 Query: 315 HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF 374 F+ R+ N S +S A K G+ + + RHT A WLL +G + Sbjct: 286 ---FVVRLPNSAPP---SPASFNNAIQNARKELGLPPVSFHGLRHTHATWLLESGVDLKI 339 Query: 375 IASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 ++ ++GH + + +IY D + E I L + Sbjct: 340 VSERLGHSSITITADIYAHVTDALQREAIEKLQRMM 375 >UniRef50_B0TI08 Phage integrase family protein n=14 Tax=root RepID=B0TI08_HELMI Length = 368 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 78/392 (19%), Positives = 152/392 (38%), Gaps = 58/392 (14%) Query: 26 CRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGE 85 C K W T KK G + S +Y R F + +G FG Sbjct: 14 CAFRYKDWTGTTRQHKKRGFAK-------KSDAVQYERDFIKKQSGG------CDMAFGS 60 Query: 86 LCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLY 145 + +++ + +T L T + K + + + + + P++ I + + ++N LL E+ Y Sbjct: 61 MVELYMEDCKTRLRPTTYEGKKYLIDSKILPVFKDMPVNAITPATVRKWQNGLLDDESDY 120 Query: 146 LDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL-QRNRIKPDPLSK 204 ++T++N L ++ +A + + T P + ++N + Sbjct: 121 --------SPTYLKTINN---QLSAIFNYARRYYGLQTNPAAVCGSIGKKNAESMQFWTT 169 Query: 205 TEFNALMESE--KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL--- 259 EF + K S ++ ++G+R GEL AL D+D E +++ ++ + Sbjct: 170 DEFRLFAAAISDKPASYAIFNTLFWTGMRSGELLALTLNDIDFESKKISITKSYARVGNE 229 Query: 260 DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM 319 D+ PPKT R +T + LE LK+ + S+ F Sbjct: 230 DVISPPKTPKSRRVITASEFLLEILKDYAGRLVDYEPSDRLFD----------------- 272 Query: 320 PRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 Y+ L + K +G+++ + RH+ A L+ G +P I+ ++ Sbjct: 273 -----------YTKHFLASEMARGCKLSGVKKIRIHDIRHSHASLLIELGFSPLLISERL 321 Query: 380 GHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 GHE+ + + Y + + E L+A S Sbjct: 322 GHESVETTLQTYAHLYPNKHGEVADKLDALNS 353 >UniRef50_A9VJZ8 Integrase family protein n=15 Tax=Bacillus cereus group RepID=A9VJZ8_BACWK Length = 370 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 71/373 (19%), Positives = 144/373 (38%), Gaps = 46/373 (12%) Query: 41 KKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTT 100 K+A N ++ E+++G + +GE + W K+ + Sbjct: 41 KEAENALTKLLSEVHTGTYV----------------EPSKLLYGEYLESWFNTKKYSVGI 84 Query: 101 NTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRT 160 T K K L + I + ++ + + NY N L +G T Sbjct: 85 QTAKVLKGYLNSRIIPSLGNIKLAKLTSLHMQNYVNSLRD-------------EGLKRGT 131 Query: 161 VDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQN 220 ++ I L+ + L A I+ K + ++ + ++ E +++ + + Sbjct: 132 IEKIIKLIRNSLEHAIDLELITKNVAAKTKLPKADKEELTVWNEHEVQFFLKAAQDSRYS 191 Query: 221 L-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM--FGPPKTNAGIRTVTLL 277 + + A+ +G+R GEL W+DVDLEKG + + + L+ KT + +R + L Sbjct: 192 IVFHMALVTGMREGELLGFRWKDVDLEKGHLTISQTLSHDGKTFLLGGKTKSSLRKILLP 251 Query: 278 QPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG 337 + LK+ + + S+ Y Q V +C P + +++ Sbjct: 252 ASTVAKLKKHRAVVLKEKLSQGEEY---------QDNDLV----MCTPSGTP-INPANVR 297 Query: 338 ARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 NA +K+ + + + RHT A LL G N I+ ++GH ++ + Y + Sbjct: 298 RSLNALIKKVAVPKIRFHDLRHTHATLLLAKGVNVKVISERLGHSNIKITLDTYSHVLPT 357 Query: 398 MNDEQIAMLNARL 410 M ++ + + L Sbjct: 358 MQEDAVNKIEEIL 370 >UniRef50_C1CZ59 Putative Tyrosine recombinase xerC-like protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZ59_DEIDV Length = 379 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 59/338 (17%), Positives = 112/338 (33%), Gaps = 31/338 (9%) Query: 77 TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 + T D W K+ ++ NT + + + + + I + Sbjct: 64 SSETLTLAAYLDRWLTHKQRDVKFNTHRSYEMTARVHIKPRLGKVQLDKLTPLHIEELVS 123 Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 LL +G++ + + LL + L A + + + V + Sbjct: 124 ALLA-------------EGQSAKVALGCVKLLRTALTQAVRWQLVGRNVAQSVTPPKHTP 170 Query: 197 IKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 + + E + + + L+ A+ +G+R GEL L WE +++ G + V+ N Sbjct: 171 KEMQVWTPDEASRFLAVAREHRLYALFYLALATGMRRGELLGLKWESINMLAGTLVVQHN 230 Query: 256 L---TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 L PKT A RT+ L +EAL+ + + Q Sbjct: 231 LIDRVSSVTLETPKTRASRRTIALSPDTVEALRAHRHSQWLEQCKAGEKW---------Q 281 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 + VF V ++L + +A + + RHT A L+ A P Sbjct: 282 EHGMVFPSDVGT-----LMFPANLMGAFRRLCAKARVPAIRLHDLRHTSASLLIRANVPP 336 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 +A ++GH +Y ++ L L Sbjct: 337 KVVADRLGHTDPGFTLRVYAHVYEEQRRAAALPLGEML 374 >UniRef50_D1BL69 Integrase family protein n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BL69_VEIPT Length = 403 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 75/397 (18%), Positives = 144/397 (36%), Gaps = 46/397 (11%) Query: 33 WEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTK 92 + IT N +R ++ +++ +++ + + ++C+ W + Sbjct: 27 FSITKDN----QLIRRAFSGNSKLEVYKLGKQWIEATQQNTSIFSSKNTKLKDICNYWLQ 82 Query: 93 -IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRS 151 +K+ + T +K S L+ + + I+ I + N + + Sbjct: 83 DVKKVSVKPKTFQKYDSTLRLYILPLLGEIKIASITPQQVQTVLNN-------WSNGTLK 135 Query: 152 NKKG--RTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNA 209 KKG + T+ L L +A G + P + K + + LS E + Sbjct: 136 GKKGHIISSSTIRCTRRYLSELFEYAVNIGLLLKNPIKLTKAPRLITTEIHTLSLDEIHQ 195 Query: 210 LMESEK---------GQSQNLW------KFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 L + K N + K A+ +G+R GE+ L W+ VDL G ++VRR Sbjct: 196 LTSTMKQQVSNNISSPYRINYYSSYIATKIALGTGMRLGEVFGLCWDCVDLIHGHISVRR 255 Query: 255 NL---TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 + T +F KT R + + Q L + ++ K + YG Sbjct: 256 TIQTGTKGQIFQDTKTKTSRRCIPISQELQSELTTYKEFQSNYAKELGDKWTDSYG---- 311 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLG-ARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 V +G S S+ + +K+ + + RHT A LL+ Sbjct: 312 ---------VVISGTFGKILSTSNFKSRYFIPILKQLNLDHITFHDLRHTHATLLLSQKI 362 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 NP + ++GH T + + Y + D+ E + L+ Sbjct: 363 NPKIVQERLGHSTITLTLDTYSHLVPDIQKEAVKALD 399 >UniRef50_Q3IEL8 Putative phage integrase n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IEL8_PSEHT Length = 383 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 89/420 (21%), Positives = 158/420 (37%), Gaps = 63/420 (15%) Query: 3 KLPTGVEIR------GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINS 56 K P GV IR ++ F ++ CRE + +K AG I +EI Sbjct: 9 KPPPGVVIRYNSKGEATSFQLTFTYKSVLCREKVPFI-PNKQGLKSAGFFLGQIKNEIAH 67 Query: 57 GEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKI-KETELTTNTMKKTKSQLKTLRI 115 F+Y + FP+S+ TT + +++ + E L +T+ K L+ Sbjct: 68 DTFDYAKHFPKSNKVKLFTTTPNDAKVLDYMNLYIERGIERGLEKSTIAGYKKAKNGLKP 127 Query: 116 IICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFA 175 + IS + D++ K + +T+ N I+ L L A Sbjct: 128 LW--DCNISEVESIDVVKLI----------------EKSTVSRKTLSNRISFLRCCLARA 169 Query: 176 YQSGFISTKPFEGVK----KLQRNRIKPD-------PLSKTEFNALMESEKGQSQNLWKF 224 I + P + ++ + N I P + E ++ G ++ + Sbjct: 170 VIDKLIKSNPVQNIRIGEYLPKINNIDSRGAHKDVYPFTPLEKAKIINGSSGTTRAIVSL 229 Query: 225 AVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEAL 284 +G+R E AL DV L+ V++ + + + KT AG R + + + + L Sbjct: 230 VFNTGIRSSEWVALKKADVCLKTKQVSIYEAI-VDGIVKATKTKAGRRKIPISEDVCDLL 288 Query: 285 KEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAV 344 + K ++F+ N +Q+ + S RW + Sbjct: 289 AIEMKKHDSE---------------------YLFL----NSQQRVWDQDSFRKNRWIKLL 323 Query: 345 KRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIA 404 G++ R PY RHTFA L++ G N ++ MGH + +Y+ YG +ID+ E A Sbjct: 324 DSCGVKYRYPYQMRHTFASQLISEGVNHWKVSKLMGHSSPNTLYQHYGSFIDEYEREHNA 383 >UniRef50_A6P1V8 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P1V8_9BACE Length = 409 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 75/398 (18%), Positives = 151/398 (37%), Gaps = 43/398 (10%) Query: 20 MFRGKRCRETLKGWEI-TNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTR 78 + G+ +G + T I+K+ + R + + V Sbjct: 19 RWEGR----YTQGIDPNTGRAIQKSVSARTQAECKEKLAKAI-------RDNRGIPVNHN 67 Query: 79 VIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNE 137 T E C +W + + + NT K ++ ++ + + + I N+ Sbjct: 68 EDYTVAEWCRLWFETYSKPVIRPNTAKTYENMIENHIVPAIGGVKLKRLTAIQIQKMYND 127 Query: 138 LLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI 197 + +++ + TV +L S L+ A + I P + + + + Sbjct: 128 SKTNGRVQRFEKKTD-TALSGSTVRRIHMVLSSALKQAVKERIIPYNPCDNCRIPPKEKK 186 Query: 198 KPDPLSKTEFNALM-ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL 256 + + + + E+EK ++ + SGLR GEL AL W+D++++ I++V + + Sbjct: 187 EMAIIPSEKLGVYLSEAEKYGVLPMFFLELSSGLRRGELLALRWDDLNVKDRILSVSKQV 246 Query: 257 TILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK 313 T +D + PKT +R V L Q A++ L +++ H + I F G Sbjct: 247 TRIDGELVITEPKTKNSVRKVALSQQAVDILVREHE---QHPDNPILFPSPRTGG----- 298 Query: 314 LHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR-RRNPYHTRHTFACWLLTAGANP 372 Y+S ++ + +AGI R + RHTFA L++G + Sbjct: 299 ----------------YWSPDAVSRINRKLLAKAGIEERVRFHDLRHTFATMALSSGVDV 342 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 ++S +GH +A + Y +DM + + Sbjct: 343 KTLSSMLGHYSAGFTLDTYTHITNDMQRGAAEKIGGFM 380 >UniRef50_C0QHJ7 Phage integrase family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHJ7_DESAH Length = 360 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 71/406 (17%), Positives = 135/406 (33%), Gaps = 63/406 (15%) Query: 11 RGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSST 70 R RY+ ++ GKR T+ + +K A + ++ +G + Sbjct: 8 RDRYVLDFYDLEGKRKWITM----PKGTTLKAAKEELRKVEDDLATGNY----------- 52 Query: 71 GAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSD 130 ++ + TF ++ W K+ + +T + K ++ I I Sbjct: 53 ----ISPKKTPTFDQVAQEWLDHKKMNIRASTWAVYEGHTKNH-FPEFKNLKIHQITIQR 107 Query: 131 ILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK 190 + + + G + T+ + L + A + G+ P + Sbjct: 108 VEKFITD-------------RQAAGMNLSTLRKILVSLRQIFNLAVKRGYCPRNPLDYAD 154 Query: 191 KLQRN------RIKPDPLSKTEFNALMESEKGQSQN-LWKFAVYSGLRHGELAALAWEDV 243 + K L+ + A +E Q + L+ A++SG R GEL L W D+ Sbjct: 155 MPKSQGEETDGADKIQILTHDQITAFLEVVTEQKYHVLFSLAIFSGARQGELLGLKWSDI 214 Query: 244 DLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 ++++R+ F KT R + + L+ LK+ Sbjct: 215 LWGDSQIHIQRSFN-NQRFYDTKTKGSNRKIDIGPVMLKKLKKWRLAC------------ 261 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 L VF K P + + + +K A + R + RHT+A Sbjct: 262 ------PPGGLDLVFP----TAKGNPMNHNNMVNRYFLPGLKAAKLERIRFHDMRHTYAS 311 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 L+ G N +I +Q+GH + +Y + N E L Sbjct: 312 LLIDQGENIKYIQAQLGHSNPTVTLNVYAHLMKGTNREAACRLEDA 357 >UniRef50_D2SBK5 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SBK5_9ACTO Length = 365 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 75/338 (22%), Positives = 131/338 (38%), Gaps = 43/338 (12%) Query: 75 VTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNY 134 R T + W +T L +T+ + +S L+ + ++ I ++D+ + Sbjct: 57 APERGRVTVEAWAEQWLA-AQTGLKPSTLYRYRSLLRAQILPRWGRHRLADITHADVAAW 115 Query: 135 RNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR 194 +L+ G G TV +L +L A + G I P GV + Sbjct: 116 VAQLVAG-------------GLAPPTVRQAHRVLALILTLAVRDGRIPRNPAAGVPLPRT 162 Query: 195 NRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 R P L++ E L ++ G+ ++ + Y+GLR GE+AAL VD + + V Sbjct: 163 RRADPRFLTREEVERLADAA-GEYGDVVRLLAYTGLRFGEMAALRVRRVDFLRRRLTVAE 221 Query: 255 NLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 + T + +G PKT+ RTV + +E L + K Sbjct: 222 SATEVGGTVEYGTPKTHQ-QRTVPIPAVLVEPLSRRC--------------------GGK 260 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 + V + S + ++ A K AG+ +P+ RHT A L+ +GAN Sbjct: 261 GRDDLVLT----SPGGAVLRSGNFRRRFFDPAAKAAGLEDLSPHDLRHTAASLLVASGAN 316 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + +GH +A M ++Y DD ++A Sbjct: 317 VKAVQRMLGHASAAMTLDVYSGLFDDDLGALADRMDAA 354 >UniRef50_UPI0001694281 DNA integration/recombination/invertion protein n=8 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694281 Length = 413 Score = 234 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 134/359 (37%), Gaps = 28/359 (7%) Query: 60 EYLRRFPQSSTGAKMVTTRVIKTFGELCD-IW---TKIKETELTTNTMKKTKSQLKTLRI 115 + L +F + + + T + + W L+ T + ++ + Sbjct: 55 DELHKFKIEVEAGEYIAPQK-MTLRQFIENEWEPKYASNTENLSPLTYQTYMHFIENRIM 113 Query: 116 IICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFA 175 + + IR I+ + N+L E + T+ +L ++ A Sbjct: 114 PVFGHKNLEDIRTLHIVTFINDLSKPEARKDGKSGK----LSPGTIQYIHRVLKNIFNRA 169 Query: 176 YQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFN---ALMESEKGQSQNLWKFAVYSGLRH 232 + I T P GVKK + + + D + E A + E + + L ++ G R Sbjct: 170 TEWQLIKTNPIVGVKKPKVEQTEFDFYDEDEAREAIAALSKEPRRWRLLILGSMVGGFRR 229 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQY 288 GEL AL W +VD + +++ +++++ + PK+ + R V + ++ LK Sbjct: 230 GELLALEWSNVDFDNMTLSINKSISLTKDGRAVEKAPKSKSSKRIVDMPDWYMDELKVHE 289 Query: 289 KLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG 348 + S + +VF G KP++ + WN KR Sbjct: 290 YEWKKEKLSVGDKW-------RGGDRQYVFHA----GFGKPFHH-TYPTEWWNGFTKRHN 337 Query: 349 IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 ++R + RH+ A L+ AGA+ + ++GH Q +IY ++ + N Sbjct: 338 LKRVRFHDLRHSSATLLIEAGASMKAVQQRLGHSKHQTTADIYAHVTKKVSRDTAEKFN 396 >UniRef50_B7WQQ6 Integrase family protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQQ6_COMTE Length = 429 Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 103/413 (24%), Positives = 159/413 (38%), Gaps = 49/413 (11%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWE-----ITNSNIKKAGNLRALIVHEINSGEFE 60 GVE+R IRI RG + L + T N+ A L I +I G +E Sbjct: 12 PGVEVRDASIRIRINMRGTSVIQRLNAPDGSALLPTLQNVMYATQLVTKIKADIRLGTYE 71 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 + F + ++ T+ I T E D W +L +TM+ R E Sbjct: 72 HENYFATENLTSE---TKPIPTLIEQIDHWFNT--LDLAKSTMRGYAVCCNFWRRTTIEV 126 Query: 121 T-------PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLR 173 T + ++ +DI L +L R + +T +NY++ + S L Sbjct: 127 TVGRGKKARVEEVKIADIP-----LDKLALSHLQLARKKASALSGKTFNNYLSAVSSALA 181 Query: 174 FAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS----QNLWKFAVYSG 229 A Q G ++ + + + DP S E N+++ + + NL +F +G Sbjct: 182 LAVQDGILTEAVSTARAHKKWQKKQADPFSLNEINSIVSYMRERYDERIANLVEFWSLTG 241 Query: 230 LRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 LR EL L W VD + + V L + KT++ R V L + A+E L+ Q K Sbjct: 242 LRSSELYGLRWGSVDFNRAEIKVHEALVFGEHKASTKTDSS-RMVLLTKRAIELLRLQKK 300 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL-GARWNAAVKRAG 348 T FVF + P++S S+ W ++ G Sbjct: 301 FTFM-----------------GGNDAFVFTNPYDD---LPWHSEKSIRNKYWIPTLRALG 340 Query: 349 IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDE 401 IR R PY+ RHT A L AG + A QMGH +M Y W++ D Sbjct: 341 IRYRRPYNMRHTNATMRLMAGQKIGYAAGQMGHS-IEMFTRTYARWLNGEQDR 392 >UniRef50_Q6ALN4 Related to pore-forming cytotoxin integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6ALN4_DESPS Length = 407 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 88/401 (21%), Positives = 150/401 (37%), Gaps = 42/401 (10%) Query: 10 IRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSS 69 +R I F + G+R RE+ G T N + LI+ EI++G F + +RFP+S Sbjct: 8 VRHNRIWFDFRYMGERVRES-SGLVDTRENRQILRRQLDLIMAEIDNGVFSFGKRFPRSR 66 Query: 70 T--------GAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 G ++ T FG+ W + +T N ++ +S L+ + Sbjct: 67 RRAFFAELEGREVTTHPSELLFGDYVLQWFADMGSGMTENQIRDYQSALQRHVLPYFRDL 126 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG-F 180 + I + + + + + + + + N I L ++ + Sbjct: 127 NFAEITSARMRKFIATM-------KGKRSEQGQPLSAKRIRNVIIPLRVIIEDCVDEYAW 179 Query: 181 IST-KPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALA 239 + PF K + + + P S E+ + + ++FAV +GLR E AL Sbjct: 180 LDFPDPFTRCKLPRPRKFRVQPFSFEEWQVFITHISPWYRPYFEFAVQTGLRPSEQVALK 239 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 W +D E +++ + KT+ R + L L Q KLT S Sbjct: 240 WVAIDHE--YIHIELSRVRGREKEDLKTHESRRRLLLRPGLRRILLRQRKLTA-GINSPY 296 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 F +++ + KL V W A ++ R Y TRH Sbjct: 297 VFVNKDRLPISQDKLRSVV---------------------WVEAFAGLELQYRRMYETRH 335 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND 400 TFA W L G P ++A +GH MVY YG +I ++ Sbjct: 336 TFASWALALGETPEWVAKTLGHVDTSMVYRTYGRYIPNLKS 376 >UniRef50_A8ZS80 Integrase family protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS80_DESOH Length = 403 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 89/394 (22%), Positives = 156/394 (39%), Gaps = 61/394 (15%) Query: 11 RGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRA-LIVHEINSGEFEYLRRFPQSS 69 R GK + +L + + A +LR + + + G+ + Sbjct: 17 RDNTFYFRKKHNGKVFKRSLNTTD-----KRTARDLRNFYLRNLVEYGQLD--------- 62 Query: 70 TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYS 129 A + TFGE+ W I + E+ +T S + + + PI+ I Y Sbjct: 63 --APEKVDYDVITFGEVAKEWASIHKKEVRYSTWPDYVSSMNGHILPNFKDMPIAEITYG 120 Query: 130 DILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV 189 D+L +R+ L G + +N + + S+ +A + G I + Sbjct: 121 DVLKFRSGLKVG----------------AKRANNILVPMKSVFDYADREGIIQDNVMRKI 164 Query: 190 KKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKG- 248 K+L + P S E N L+++ Q A ++G+R GE L W D + Sbjct: 165 KRLSEEAPEIHPFSYDEVNRLLDAVHPWYQPYLIVAFFTGMRAGEQNGLCWSDFLEDMQP 224 Query: 249 --IVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 + +R+ G PKT R + L LEAL EQ KLTG ++ Sbjct: 225 EPRIFIRKTYVY-KKDGIPKTKKSKRYIKCLPQVLEALSEQRKLTGKNK----------- 272 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 +F+ +G++ + W A+++AGI R P TRHTFA +L Sbjct: 273 ---------HIFL--TIDGRRMTPDHIR--KEVWIPALEKAGIEYRPPIQTRHTFATMML 319 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMND 400 +AG + ++ + +GH + QM+++ Y W+ + Sbjct: 320 SAGEDIGWVQNMLGHSSLQMIFQRYYAWVPEKTR 353 >UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5L4_9ACTO Length = 404 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 121/347 (34%), Gaps = 32/347 (9%) Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 ++ A+ V +T W ++K E T++ ++ ++ + + PI +R Sbjct: 30 ANRTAQGVRVDDRETVASFLARWLQVKAGEAKPTTVRSYRAHVERVIVPAIGHVPIEELR 89 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 + + GR TV A L S L + ++ + Sbjct: 90 AEHVEQLLVD--------------AANGRGPVTVRRIHATLRSALSYGVKTRRLPFNVAS 135 Query: 188 GVKKLQRNRIKPDPLSKTEFNALMES-EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLE 246 V R + P S E A + E + L++ GLR GE L W D+DL Sbjct: 136 NVTPPNGIRPEVQPWSAAELAAFLRHVETDRLGPLFEVIAACGLRRGEALGLRWSDLDLA 195 Query: 247 KGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 +R+ + + F PKT + TV L + A++AL + R+ YH Sbjct: 196 NRTARIRQTIVDVGGRLQFSTPKTRSSEATVPLTERAVQALLQVRLGQDLDRQGWGGAYH 255 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 VF + R+ A K AG+R + RH A Sbjct: 256 ---------AHDLVFA-----RENGAPLRPEYATRRFVALTKAAGLRWVRLHDLRHGAAS 301 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 +L AG A ++ + H + + + YG +D + A L Sbjct: 302 LMLAAGVPMAIVSKVLRHSSIGITVDTYGHLSEDTVRTASDAMAAAL 348 >UniRef50_C5UVC6 Site-specific recombinase, phage integrase family n=2 Tax=Clostridium RepID=C5UVC6_CLOBO Length = 385 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 89/394 (22%), Positives = 148/394 (37%), Gaps = 45/394 (11%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR R +G+ K A I+ + N G + T Sbjct: 24 GKRRRVIKQGF----RTKKLAEAFATQILDKKNHGF---------------VSPTDSDLL 64 Query: 83 FGELCDIWTKIKETELT--TNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 F W + T L NT S++ T I + + I I + N+ N L+ Sbjct: 65 FKNFIMKWYDMHTTSLKLSVNTRNDYLSRINTNLIPLLGNYKIKDISIDVVQNFYNTLI- 123 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD 200 N+K TV Y+ +L S L++A I P +KK++ + K + Sbjct: 124 -----------NEKHLKPTTVKKYLDILSSCLKYAQSKDLIYKLPTSYIKKVKIQKPKIE 172 Query: 201 PLSKTEFNALMESEKGQSQNLWKFA-VYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 ++ E N + K F + +GLR GEL L W DVDL+ GI+ V L Sbjct: 173 YWNQEEVNFFLNYIKNTYLYTPIFIDILTGLRIGELCGLRWCDVDLQNGIITVNHQLIHD 232 Query: 260 DMFG-----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL 314 KT++ R++T+ + ++ LKE K +E R+ + + L Sbjct: 233 KRLKVLLLADLKTSSSHRSITIPKILIDYLKE-LKANRQATNTEYVVLDRQDFKYIPRSL 291 Query: 315 HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG-IRRRNPYHTRHTFACWLLTAGANPA 373 F +V K+ S+ +++ + + RHT A L+ G N Sbjct: 292 SMNFTKKVAKYKK----SIDDFKKANEEVPHGYMQLKQISFHGLRHTHATLLIANGENVK 347 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 ++ ++GH +M Y +D M + +LN Sbjct: 348 VVSERLGHTDIRMTLNTYTHVLDSMKNNTANLLN 381 >UniRef50_A4J0G7 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0G7_DESRM Length = 388 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 64/377 (16%), Positives = 150/377 (39%), Gaps = 20/377 (5%) Query: 39 NIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETEL 98 N K+ + E ++ F + + + + + F E + W + K+ + Sbjct: 24 NGKRIQKYKGGFKKERDAKLF--AAQLTVNISQGTHIEPNKMFLF-EYLNNWLEEKKETI 80 Query: 99 TTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTV 158 + + + ++ +S +R + I ++L + +D + + K + Sbjct: 81 SPTSYCGYEVNIRCHINPYIGGIKLSDLRAAHIRGLYSKLQKAREIKIDGEKRSFKPLSG 140 Query: 159 RTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS 218 ++ +L L AY+ I P + V +N+ + LS + +++ + + Sbjct: 141 TSIRYVHRVLSKALEDAYREETIPKNPAKLVTPPTKNKFEAGFLSTKQIREMLDKLREDA 200 Query: 219 QNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRT 273 + +V G R GE+ L W DVD+E ++++R NL + + + KT++ R Sbjct: 201 LYMPVYLSVVLGARRGEVLGLQWSDVDMENKLIHIRHNLIMDNGNPVLREKTKTDSSNRV 260 Query: 274 VTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSV 333 + + ++ALKE ++ E+ H + K FV C ++ Sbjct: 261 IVVTDRLIKALKEHKL---KLKQKEMKLQHGQLY----HKSDFV-----CTWPDGKPFNP 308 Query: 334 SSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGM 393 S L ++ +++ G+ + RH+ A ++ + ++GH T Q+ ++YG Sbjct: 309 SHLSRSFSLRLQKYGLPNIRFHDLRHSNAALMIAQNVPMKGASDRLGHSTIQITNDLYGH 368 Query: 394 WIDDMNDEQIAMLNARL 410 + +E ++ + Sbjct: 369 TERSVQEEIAIKIDQAI 385 >UniRef50_A9KI10 Integrase family protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KI10_CLOPH Length = 443 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 79/427 (18%), Positives = 146/427 (34%), Gaps = 59/427 (13%) Query: 4 LPTGV-EIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 LP G+ + + + G R L G ++K+ +EI G + Sbjct: 56 LPKGITRCSDGRYQARYTYEGHRYC--LYG-----RDVKELEERLNNAKYEIQHGIYAKE 108 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKET-ELTTNTMKKTKSQLKTLRIIICEST 121 R + + W ++ + T++ + Sbjct: 109 ER----------------ISLNAWYETWINEYKSMTVKQGTVESYECMYLYYVKPELGKR 152 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 I IR I N+L ++ G + T+ LL ++ + A ++ I Sbjct: 153 LIKDIRGEHIQKLYNDL-------------SRNGYSKSTISLIHVLLGAMFKQALKNELI 199 Query: 182 STKPFEGVKKLQ-RNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALA 239 P + + + + L+ E L++ G + + + ++ +GLR GE+ L Sbjct: 200 KKNPVDFTTLPRAERKKERRVLTLKEQEILLKEITGHELEPVVRLSLATGLRVGEVTGLE 259 Query: 240 WEDVDLEKGIVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 W DVD K V VR L PKT+ R++ LL LK + H Sbjct: 260 WCDVDFNKKEVTVRGTLKCTRKGMEYYKDTPKTDKSTRSIPLLDNMELMLKRYRIIQKEH 319 Query: 295 RKS-----------EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAA 343 + S E + RE G+ + + + +G + YYS S+ Sbjct: 320 KLSMGIDWKPIEGLEDLVFLREDGKPFSGQHIRQQLVHIVDGINEKYYSKKSIR---QEK 376 Query: 344 VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 + P+ RHTFA L G P + +GH + M ++Y + +++ Sbjct: 377 LLEEKFDYFTPHALRHTFATRALENGIPPKVVQEILGHSSITMTLDLYTHVLPQTKAQEM 436 Query: 404 AMLNARL 410 L + + Sbjct: 437 KKLESLI 443 >UniRef50_A2V4W2 Phage integrase n=5 Tax=Gammaproteobacteria RepID=A2V4W2_SHEPU Length = 388 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 78/411 (18%), Positives = 156/411 (37%), Gaps = 40/411 (9%) Query: 8 VEIR-GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 + +R I+ G R RE K T N+ A + EI+ G F+Y FP Sbjct: 4 IRVRPNGRIQFDMHLYGCRFREGTKMLA-TPKNLATAKTTLKKMNAEIDLGCFQYRDYFP 62 Query: 67 QSSTGAKMV-------TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 +S + R F + W + K+ + ++ L I Sbjct: 63 KSKKVTQFEQLQREKHPDREYPFFNDFAYQWFERKKATWKNSYRNTMQNVLDKYLIPQFG 122 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 +T ++ I S + YR +L+ + + DN R + R ++N + + S++ A + Sbjct: 123 NTLMNEITLSQVDFYRQQLM--QMVKADNTRQ----LSNRRINNLLWPIVSMVSLAAE-E 175 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALA 239 + P + L+ + + P++ E + + ++ + ++G+R E+ L Sbjct: 176 YKFEYPLRRYRSLKEEKAESHPMTIKEVKLFLSHVPPEWKDYFIIRFWTGMRSCEIHGLE 235 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 W+ VD ++ +R+N + KT R + + +A K L Sbjct: 236 WQHVDFNHRLIRIRQNW-VNGEVCDVKTPKSRRDLKMCDTVYDAFKRIKNLALSE----- 289 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 FVF + + S W + +AG++RR Y TRH Sbjct: 290 --------------SGFVFTGKSDAPLDTHFVS----KKLWYPTLIKAGLKRRRAYETRH 331 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 T A + A NP +I+ +GH ++++++Y ++ + + + + Sbjct: 332 TAAVLHIAALENPLYISQMLGHSDTRLLFDVYAPYVANASRSDGNAFDKLM 382 >UniRef50_Q252J3 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q252J3_DESHY Length = 395 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 63/330 (19%), Positives = 122/330 (36%), Gaps = 36/330 (10%) Query: 76 TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPIS--HIRYSDILN 133 + F + W + + T K ++ L I+ + I + Sbjct: 60 NPQADVLFTDYLQKWLTQAKPTIAKTTFKGYQTMLDGRISRYFTELNITLGEVTPQHIQD 119 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 + + +G T TV +Y A+L L+ A + I + P + V + + Sbjct: 120 FHQSIFD-------------EGHTPNTVIHYHAVLRRALQNAVKKEIIDSNPADRVDRPK 166 Query: 194 RNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 +N S E AL + + K A Y GLR E+ L W+ ++LE+ +++ Sbjct: 167 KNVYHAQFYSAEEMMALFDEISDDPLEICVKLAAYYGLRRSEVLGLKWDAINLEQKTISI 226 Query: 253 RRNLTILDMFGPP--------KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 + + + G KT + RT+ LL + L + + +RK Y R Sbjct: 227 KHKVIEDTVDGKSIAVGEDVLKTKSSFRTLPLLPSVEKLLLAEKEKQEMYRKLFKRSYCR 286 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW 364 +Y + +C + + + ++ A+++A +++ + RH+ A Sbjct: 287 DY------------LDYICLDQAGKLMRPNYVTEHFSWALEKADLKKIRFHDLRHSCASL 334 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMW 394 LL G + I +GH T +IY Sbjct: 335 LLANGISMKQIQIWLGHSTFSTTADIYSHL 364 >UniRef50_UPI000169495E prophage LambdaBa04, site-specific recombinase, phage integrase family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169495E Length = 379 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 133/354 (37%), Gaps = 46/354 (12%) Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISH 125 QS T GE + + + E+ NT ++ + +K S ++ Sbjct: 61 QSELLNGTYVEPTKLTVGEFLLDFVENTLKYEVAPNTYEQRMTFVKNHIQPNIGSLRLTD 120 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 + + + + N L ++ V N LL A + IS P Sbjct: 121 LTPNHVQKFYNSL--------------REHYGAGYVQNIGNLLSKAFTQAVKWNMISRNP 166 Query: 186 FEGVKKLQ--RNRIKPDPLSKTEFNALMESEKG---QSQNLWKFAVYSGLRHGELAALAW 240 VKK R K + + ++ K ++ A+ SG+R GEL L W Sbjct: 167 IPLVKKPSLSRKNTKMKTWTVEDQRKFLDYAKDGPKLYYVIFLLALTSGMRKGELLGLIW 226 Query: 241 EDVDLEKGIVNVRRNLTILDMF----GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 +DVD +KGIV+++R + PKT + IRT+ L +P ++ +K+ Sbjct: 227 DDVDTKKGIVSIKRTIVYAQRKLYLKDMPKTESAIRTIQLPEPTIKVMKQWKLEC----- 281 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 +L+ +F G P +SL + +K AG+ + Sbjct: 282 -------------PANELNLLFPSPKTKGILYP----NSLDKQLAKTIKGAGVPEITMHG 324 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHTFA LL + NP + +GH T + + Y + +M + + L A L Sbjct: 325 LRHTFATTLLGSNVNPKIVQEMLGHATIKTTMDTYSHVLPNMQKDAASQLGAVL 378 >UniRef50_A8RK44 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RK44_9CLOT Length = 366 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 41/333 (12%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F + ++ K + L T+ + PI+ I+ +DI N++NEL++ Sbjct: 58 FKDFVALYMKDADPRLRETTLANKHYLFNKKVLPYFGEMPINAIKPTDIRNWQNELINYR 117 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL-QRNRIKPDP 201 R N +G + + L + FA + + P + ++N + Sbjct: 118 -------RPNGRGYSPTYLRTINNQLTAAFNFAVKFYGLRENPCHKAGTMGKKNADEMLF 170 Query: 202 LSKTEFNALMESEKGQS--QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 + EF +++ + + ++ Y+GLR GEL AL ED+D ++ I++V +N L Sbjct: 171 WTNEEFKVFIKAMESRPVGYTVFMVMYYTGLRVGELLALTPEDIDFDRHIISVNKNYQHL 230 Query: 260 ---DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 D PPKT AG R V + + LK+ + ++ F Sbjct: 231 NGKDYIYPPKTEAGYREVVMPKVLESCLKDYLAKLYDVQPTDRIF--------------- 275 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 Y +G + +G ++ + RHT A L+ G P +A Sbjct: 276 -------------PYDRGWVGRQMKYGCDHSGTQKIRVHDVRHTHASLLIDMGCTPLLVA 322 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 ++GHE Q E Y + E L+A Sbjct: 323 ERLGHERVQTTMETYSHLYPNKQSEVANQLDAM 355 >UniRef50_D2BLD3 Phage integrase n=4 Tax=root RepID=D2BLD3_LACLK Length = 399 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 75/378 (19%), Positives = 135/378 (35%), Gaps = 32/378 (8%) Query: 44 GNLRALIVHEINSGEFEYLRRFPQS-STGAKMVTTRVIKTFGELCDIWTKIKETELTTNT 102 ++ I +G L R ++TFGE+ + + ++ + + + Sbjct: 33 KQIKTDIRGRTKTGVKNELERLKNEFKKNGNTKGKESLETFGEVAESFFELYKLQQKVGS 92 Query: 103 MKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVD 162 +++ +S L T I + IS I + I E L + G + + Sbjct: 93 IRQMRSNLDTYAIPAFGNKRISKITTAHIQKQVIEWAKNAAEPLGGKQKRDVG-SGKDYK 151 Query: 163 NYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP----DPLSKTEFNALMESEKG-- 216 + ++ + + A G I P V + KP +KTE + L + Sbjct: 152 LQLNVINRIFQHALSLGIIDRNPCHSVIIPKVKIDKPNKEVKFYTKTELSELFSHIESLD 211 Query: 217 -------QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMF-GPPKTN 268 L + V SGLR GE AL W DVDL+ V+V + + PKTN Sbjct: 212 NTKWSTQYFNALIRLLVASGLRIGEAMALEWFDVDLDNQTVSVSKTTVQRTVIQDTPKTN 271 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 R +++ A+ LK Y F+ +++ + + P Q Sbjct: 272 KSNRVISIDSKAVSTLKRWY------------FFQKKHFMSLGNPHQSLVFPT----WQG 315 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 L R A + + + RH+ A L AG I ++GH T QM Sbjct: 316 NVMDYHGLNYRLKKIEDAAKLTSLSFHGFRHSHASLCLNAGMTYKVIQERLGHSTLQMTM 375 Query: 389 EIYGMWIDDMNDEQIAML 406 ++Y + ++++ + Sbjct: 376 DLYSHLEPEKKNKELELF 393 >UniRef50_C4FP65 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FP65_9FIRM Length = 357 Score = 231 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 128/342 (37%), Gaps = 36/342 (10%) Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 A+ T C+ W ++K ++ NT+ + +KT + S + + ++ Sbjct: 43 AQCANYDNTITTERWCEYWIRLKTDTVSQNTLSSYQYIIKTYIVPFIGSIRLVELSALNV 102 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 + + H + RT+ + +L ++L+ A IS VKK Sbjct: 103 RALMDSMSH---------------LSARTISYTLTVLRAILKQAVMDEIISKNVATLVKK 147 Query: 192 LQRNRIKPDP-LSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 ++ R + LSK E +E + L+K A +GLR E+ L W+DV+L++ Sbjct: 148 PKQERKREMVTLSKEEVETFLEQIDDVEWHALFKLAFTTGLRRSEILGLTWDDVNLKQKT 207 Query: 250 VNVRRNLTILDMF----GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 + V + + +D K ++ R+++L + L + R Sbjct: 208 LTVNQTVLRIDEVTTISKTTKNSSSRRSISLDDKTIAELLKLRTCVDKRRLKA------- 260 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWL 365 + + VF + N + + + + G + TRHT A L Sbjct: 261 ---PNWRNNNLVFPGKFGNPR-----DPAKVSLKCKKFATAIGRPDFTMHDTRHTHATLL 312 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 L AG N + ++GH + Q + Y M + + ++ Sbjct: 313 LEAGVNFKVVQMRLGHSSYQQTMDTYSHVTPIMEADVVEKIS 354 >UniRef50_B0PGN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN1_9FIRM Length = 402 Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 127/344 (36%), Gaps = 33/344 (9%) Query: 74 MVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDIL 132 +T T GE D W + L NT++ + ++ + +S + DI Sbjct: 62 ELTEDSRMTLGEWLDRWMEDYGAATLRPNTLRSYEQFIRCYIKPYLGNKIVSRVTRMDIQ 121 Query: 133 NYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL 192 +L H + ++ + V A+L L+ A + I+ P +G Sbjct: 122 KLYRKLKHEGRVREHPEHGHE--LSDTMVLRIHAMLHRCLKDAEAAHVIARNPTDGAVVP 179 Query: 193 QRNRIKPDPLSKTEFNALMESEKGQ--SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 + N L+K + + + + ++ + + +GLR GE+ L W+D D + G + Sbjct: 180 KANHRPKQILTKEQMETFLAAVERNEIWRDFFYTELTTGLRRGEICGLMWQDFDEKAGTL 239 Query: 251 NVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 + R++ + G KT+ G RT+ L ++ L+E+ H S+ F Sbjct: 240 KILRSVNVPKAGELEIGETKTSQGRRTIRLPPSTVQRLRERK----QHAVSQWIFPEPLA 295 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 + S+ ++ AG+ + RHTFA L Sbjct: 296 --------------------PEKPVRPSAAYYWMKRILREAGLPTIRFHDLRHTFATHAL 335 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 T+G + ++ +GH A + Y DM E ++ L Sbjct: 336 TSGVDAKTLSGILGHTNASFTLDTYTHVTPDMQQEASHIVGGFL 379 >UniRef50_C5WEI1 Site-specific recombinase, phage integrase family n=9 Tax=Streptococcus RepID=C5WEI1_STRDG Length = 384 Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 68/378 (17%), Positives = 146/378 (38%), Gaps = 32/378 (8%) Query: 41 KKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTT 100 ++A +++ + ++E + ++S + KT+ E+ + W + + + Sbjct: 28 QRADHIKRGFRTRKEAKDYEARLIYLKASGRLEEFIKPTHKTYNEIFEKWYQAYQDTVEP 87 Query: 101 NTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRT 160 T +T + + + PIS I D N+ E K + + Sbjct: 88 TTASRTLDIFRLHILPVMGDLPISKISPLDCQNFITE----------------KAKVFKN 131 Query: 161 VDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD-PLSKTEFNALM----ESEK 215 + + + FA + + P + +R + + + + E + + E Sbjct: 132 IKQIKSYTRKVFDFAIKMKLLKHNPMTEIIMPKRKKTRIENYWTVQELQEFLAIVLQEEP 191 Query: 216 GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIR 272 + L++ YSGLR GEL AL W D+D + ++V ++L LD + K + +R Sbjct: 192 YKHYALFRLLAYSGLRKGELYALKWADIDFQSETLSVNKSLGRLDGQAIEKSTKNDFSVR 251 Query: 273 TVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYS 332 + L + L+E + + K F+F G +P ++ Sbjct: 252 KIKLDSETISILQEWKSINQKEKAQLAV-------APLSIKQDFIFTYCTRTGSIEPLHA 304 Query: 333 VSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 + + +++ +R+ +P+ RHT A ++ G +P A ++GH ++QM + Y Sbjct: 305 -DYINNVLSRIIRKHSLRKISPHGFRHTHATLMIEIGVDPVNTAKRLGHASSQMTLDTYS 363 Query: 393 MWIDDMNDEQIAMLNARL 410 ++ D I L Sbjct: 364 HSTNNGEDRSIKQFADYL 381 >UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TH34_LACRL Length = 383 Score = 230 bits (586), Expect = 9e-59, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 126/363 (34%), Gaps = 42/363 (11%) Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 RF + + T R TF + W + + +T ++T Q+K + + + Sbjct: 49 ASRFTLDADAGSLSTNR-SMTFKAVYLEWDAAYKNTVRESTYERTYIQIKKHVLPLFGNK 107 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 PI+ I + + N+ T R ++ +LRFA + G+I Sbjct: 108 PINKITTAQLQQAVNQWSKQVT---------------RNYRRWLTTASRILRFALRRGYI 152 Query: 182 STKPFEGVKKLQRNR----IKPDPLSKTEFNALMESEK----GQSQNLWKFAVYSGLRHG 233 + P + V + + + K E Q L++ + GLR G Sbjct: 153 NKNPADLVIIPKEKEQIGDVAANFWDKQELTRFFSYIDAKQEPQKTALFRILAFGGLRRG 212 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTI----LDMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 E AL W+D+ + V + L+ + PPKT RT+T+ + ALK Sbjct: 213 ECLALTWKDISFTDSTITVNKTLSQGMNGRQLVQPPKTRKSRRTITMDSKTMSALKHWRL 272 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 + + G + VF + + + + I Sbjct: 273 VQLQK--------YMALGFNANKPDQLVFSNS-----KNKHLLLHKPADWLKSIEDTHKI 319 Query: 350 RRR-NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 R + RH+ A L +AGA + ++GH + IY + N E + L A Sbjct: 320 EHRITIHGFRHSHASALFSAGATVKEVQERLGHSDVKTTLNIYTHVTKNQNKEAVNKLVA 379 Query: 409 RLS 411 L+ Sbjct: 380 YLN 382 >UniRef50_C1IBC3 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBC3_9CLOT Length = 400 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 69/381 (18%), Positives = 132/381 (34%), Gaps = 43/381 (11%) Query: 46 LRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE-TELTTNTMK 104 +R + + + F + + T T + +W + + E +T+ Sbjct: 47 IRKQFYGKTKLEVLKKVDDF-KVKNTLGLSTIDEKTTVQQWIKMWLEEYKMNECRPSTID 105 Query: 105 KTKSQLKTLRIII-CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 + + + ++ + NY NEL+ KK +T T+ Sbjct: 106 RYFGIYRNYIENTNLGVVKLKDLKPLTLQNYYNELIK------------KKNKTTDTIKI 153 Query: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKLQ-RNRIKPDPLSKTEFNALMES-EKGQSQNL 221 +L +R A + I P V + + + + + E + + E + + + Sbjct: 154 INKVLSGGMRQAQKEQLILNNPCLFVTLPKSKVKEEVMTFTMEEQRIFLNAIEDSRDRCI 213 Query: 222 WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP------------PKTNA 269 + A+ SGLR GEL AL W D+D V V +++ + F PKT Sbjct: 214 FNLALGSGLRLGELLALKWSDIDFSSNEVKVSKSVKRVKCFDENTNTKTKIIEQLPKTRY 273 Query: 270 GIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKP 329 R + L + + LK + + Y + VF + Sbjct: 274 SERKIPLPKATINELKRHKNIILQEKLMAGDIYI---------DNNLVFPNVLGG----- 319 Query: 330 YYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYE 389 Y +L R+ + + +A I R + RHT+A L G + I +GH + + Sbjct: 320 YIDARNLTKRYKSILNKANIPYRKFHALRHTYATRLFENGVSLKVIQVLLGHSSMDITAN 379 Query: 390 IYGMWIDDMNDEQIAMLNARL 410 IY + + +L+ L Sbjct: 380 IYTHVLPKEKIRAVDVLDKCL 400 >UniRef50_A4XMV7 Phage integrase family protein n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMV7_CALS8 Length = 332 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 119/331 (35%), Gaps = 42/331 (12%) Query: 77 TRVIKTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 + TF E D W + + + +T K+ + LK + + P++ ++ DI N Sbjct: 32 SNSSITFKEFVDYWFEAYASTAVKPSTQKRYRQLLKP-ALRAIGNKPLNKVKPLDIQNIY 90 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 L + + T+ LL + + A +IS P + V Sbjct: 91 IALAGTQ--------------SNCTILKLHRLLHEIFKHAQMWEYISDNPVKKVVPPTPE 136 Query: 196 RIKPDPLSKTEFNALMESEKGQSQNLWKF-AVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 + D +E K + A+++G+R GE+ +L W DV+ E ++++ + Sbjct: 137 KKVFDVWDVETAKRFLEIIKDEPIYYPALIALHTGMRAGEILSLKWCDVNFETRVISIVK 196 Query: 255 NLTILDMFGP--PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 + KT R V + + LK Y++T Sbjct: 197 SERKNRGLKTVNLKTKTSKRAVYMNDILYKELKNLYEITKPKP----------------- 239 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 VC +V+ L ++ VK+ + RHTFA +L+ G N Sbjct: 240 ------DDFVCPRLPTGNLTVNYLSRKFKKLVKKHNFPLIRFHDLRHTFATLMLSLGVNT 293 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 +A +GH ++ + Y + M +E + Sbjct: 294 KIVAEILGHSDIKLTADTYSHVLPTMQEEAM 324 >UniRef50_C9AMW3 Phage integrase n=8 Tax=Enterococcus faecium RepID=C9AMW3_ENTFC Length = 378 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 83/416 (19%), Positives = 147/416 (35%), Gaps = 62/416 (14%) Query: 7 GVEIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 GV RG+ +F G R + G + A ++ +I+ E + Sbjct: 4 GVRKRGKRWYYYFEDINDDGSRKKVEKVGGDTRPE----AEAALRKVLSDID----ETGQ 55 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 F + T + D W K + L NT + + +K Sbjct: 56 YFLGTDTR-----------VKQYLDFWMKEYVKLNLKYNTYENYRFTIKNHINGYLGKKK 104 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY-QSGFI 181 ++ + + + N+ N KKG + +T+ ++L + L A G I Sbjct: 105 LTDLSPALLQNFINAEF-------------KKGYSKKTMTITHSVLKNALNMAVYPWGLI 151 Query: 182 STKPFEGVKKLQRN-----RIKPDPLSKTEFNALMESEKGQSQNLWKF--AVYSGLRHGE 234 P VK + + +S +F+ ++E Y+G+R GE Sbjct: 152 KQNPMLYVKIPKYEERPTTKKDLKIISLEDFDHMLEITPEGHPFYIPLNIGFYTGMRVGE 211 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLT 291 + L W++VD G + V + + D ++G PKT++ RT+ + Q L LK+ K Sbjct: 212 VCGLTWDNVDFSNGTITVEKQMVKNDGAWVYGTPKTSSSNRTIFIGQTLLAILKKHKKQQ 271 Query: 292 GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR 351 +R Y K+ V P V + + SL Sbjct: 272 LENRMKYGKLYIDSNAVCTKEDGGLV-TPSVVKWNTRRISNALSLS-------------- 316 Query: 352 RNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 N + RHT A LL GA I+ ++GH + + Y D M ++ + ++ Sbjct: 317 FNFHSLRHTHATLLLENGAKMKEISERLGHSRISITMDTYSHVTDKMRNQTVDIME 372 >UniRef50_C4V5B3 Prophage LambdaCh01, site-specific recombinase phage integrase family protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V5B3_9FIRM Length = 377 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 68/389 (17%), Positives = 126/389 (32%), Gaps = 35/389 (8%) Query: 26 CRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGE 85 R + KK I E E+L + ++ +T + T Sbjct: 6 VRYNYRDPATGQIVRKKKRGFLRRIDAE------EFLLQINKAQQEGVFLTPEKL-TLST 58 Query: 86 LCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETL 144 + W + + +T + ++ +K I I I I + LL Sbjct: 59 YLNTWLSSYAKVNVKASTYAQYEAIVKKRLIPWAGGCDIKAITPMQIDEFYATLLQQ--- 115 Query: 145 YLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK-LQRNRIKPDPLS 203 K G + ++V +L L A Q G + P V + + K S Sbjct: 116 ---GRADGKGGLSAKSVLYIHRVLNEALGHAVQKGLLVKNPLLSVTNIPKAKKFKASAYS 172 Query: 204 KTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 E +L+E+ + Q A GLR GE L W +D + + + + + Sbjct: 173 AEEIRSLLEAAAAENSFWQAAIALAAICGLRRGECLGLKWSKIDFDSQSITIDEQVIEIH 232 Query: 261 M---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 F PK+ IRT+ LK + + H++ Y + V Sbjct: 233 HKIHFSTPKSTESIRTIHAPAEVFAILKRRKEELDQHKEWLGNAY---------DEHDLV 283 Query: 318 FMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 +C G P + + + R +R + RH+ A +L +G + Sbjct: 284 ----LCRGNGSP-IRPGNFTKAFKDFLARHNMRTIRFHDLRHSCASLMLQSGVAMKTASE 338 Query: 378 QMGHETAQMVYEIYGMWIDDMNDEQIAML 406 +GH + + ++Y + +E + Sbjct: 339 ILGHSSIAITADLYTHVMQKTKEEAAGKI 367 >UniRef50_C0BF20 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BF20_9FIRM Length = 373 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 79/419 (18%), Positives = 156/419 (37%), Gaps = 73/419 (17%) Query: 3 KLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 KLP G+ RG FM++G + S I K + +++ G + Sbjct: 9 KLPKGIRQRGNTFEGRFMYKGVSY-------TVQASTITKTQKEMTDLKYKLEHGLYV-- 59 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICEST 121 + T E + W + K+ + T + K+ + Sbjct: 60 --------------KKEKITLMEWYETWLEEYKKNRVKIGTYTSYEKYYKSTINNRLGNK 105 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 +S IR I N+++ K+G + ++ A+L L+ A ++G I Sbjct: 106 ELSEIRGEHIQKLYNDMV-------------KEGYAISSIKIVSAILNGCLQQAMKNGLI 152 Query: 182 STKPFEGVKKLQRN--RIKPDPLSKTEFNALME-SEKGQSQNLWKFAVYSGLRHGELAAL 238 P + + ++ + + ++K + + M+ +E+ + + + +G+R GE+ L Sbjct: 153 ERNPVKLAELPRQTGTKKERTAMTKEQQDLFMKYAEESYLYHFFSVMLRTGMRKGEMQGL 212 Query: 239 AWEDVDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 + D+D ++ +++VRR L ++ G PKT R + L E ++ Q K G Sbjct: 213 KYSDIDKKQNVIHVRRTLKYIEGKGYFEDTPKTRTSTRDIPLTAAITEHIEAQRKYWGFK 272 Query: 295 --RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKR-----A 347 R + F CN P S + + +KR Sbjct: 273 VVRMDQYLF---------------------CNENGDP-ISRERIQGEIDRIIKRIKSDGY 310 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 R + RHTFA + AG P + + +GH + M ++Y + D +++ + Sbjct: 311 DFPRITSHVFRHTFATRAIEAGMPPQVLKTILGHSSLAMTMDLYSHVLPDTKADEMQKI 369 >UniRef50_Q30RZ4 Phage integrase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30RZ4_SULDN Length = 392 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 81/408 (19%), Positives = 154/408 (37%), Gaps = 60/408 (14%) Query: 11 RGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSST 70 R + + F KR R + +N ++ I+ E+ G + Sbjct: 22 RSGHWNLDFFIDNKRQRRSTSL----KANSDNLLIIKKEIIPELMLGLT------GANIA 71 Query: 71 GAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSD 130 + T E + + + ++ + K + T IS I+ D Sbjct: 72 LEEEFDDPKDMTVEEFGIKSINSNKPNIKPHVYERKMAAFKNYVVPYFGKTKISAIKPMD 131 Query: 131 ILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK 190 I +++N LL T + Y ++ ++L+ A+ + I P + VK Sbjct: 132 IQDWQNRLLTT--------------LTPSSAQKYRSIFYNILQDAFINEIIVKNPMQLVK 177 Query: 191 KLQRNRIKPDPLSKTE---------FNALMESEK--GQSQNLWKFAVYSGLRHGELAALA 239 ++ + + E ++E + ++N +K +++G+R GE AL Sbjct: 178 APKQKSKQKTLFDEEEDVMPFNNAEIKLILEDTQLFEHNKNFYKLMLFTGMRPGEAVALR 237 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 W+D+ +K + + + + G PKT + +R V +L LE L Q KLTG E Sbjct: 238 WQDILFDKKQIKIMQTR-VAGKDGTPKTMSSMRYVDILPQTLEVLLSQQKLTGDK---EY 293 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 FY R R Y+S +L A + + R I+ R Y+ RH Sbjct: 294 LFYTRSGKR---------------------YFSHDTLAASFKRLLTRNKIKERVLYNLRH 332 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 TFA +++ G + +++ +GH+ + Y +I + + L Sbjct: 333 TFASQMISQGVDIVWVSKTLGHKDVSITLSTYTKFIQEDEATRFQKLE 380 >UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF85_9FIRM Length = 398 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 69/368 (18%), Positives = 133/368 (36%), Gaps = 33/368 (8%) Query: 61 YLRRFPQSST---------GAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLK 111 Y + P++ ++ T T + + W +L NT++ + + + Sbjct: 37 YFKTLPEAKKWLADAKYEDTHNLIVTAPDMTVDKWFNYWIDNIICDLAPNTIRNYRERYE 96 Query: 112 TLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSL 171 + + I+ ++ N + + T+ + ++ Sbjct: 97 KNIQPLIGTMCIADVKPMHCKAVLNRM--------------ETEYAGSTIRQTYISMGTM 142 Query: 172 LRFAYQSGFISTKPFEGVKKLQRNRI--KPDPLSKTEFNALMES-EKGQSQNLWKFAVYS 228 + A + I+ P GV+ + R L+ E +E+ E+ + + + + Sbjct: 143 FKSAVMNDIIAKHPMNGVRYTKPVRAVDDIKYLTVEEQEKFLEAAERSHNYRQYALLLET 202 Query: 229 GLRHGELAALAWEDVDLEKGIVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEA 283 GLR EL L W+ +D +K + V ++L GPPKT RT+ L + A Sbjct: 203 GLRTAELIGLTWDAIDWKKRTLTVNKSLEYRHSRRYWRAGPPKTKKSYRTIPLTERAYTI 262 Query: 284 LKEQYKLTGHHRKSEITFYHREY--GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWN 341 LK Y ++SE+ EY RT ++K + N + SS Sbjct: 263 LKSCYDEKDTRKESEMLSQILEYTDSRTGEKKCLVMRDLVFINWRTGEPAKNSSYDTHLY 322 Query: 342 AAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDE 401 AGI+R + RHT+A + G P + +GH + + + Y D+ + Sbjct: 323 KLCDEAGIKRFCMHALRHTYATRAIERGVQPKVLQQLLGHASIKTTMDRYVHVTDESLAK 382 Query: 402 QIAMLNAR 409 + A Sbjct: 383 AVQQFEAA 390 >UniRef50_D2SF19 LigA n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SF19_9ACTO Length = 397 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 78/394 (19%), Positives = 138/394 (35%), Gaps = 62/394 (15%) Query: 12 GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTG 71 G RI R R + + + +R+ +T Sbjct: 3 GSITRITLSDGSARYRARYRD----PGGRQHERRFVRKVD----------AQRWLDEATS 48 Query: 72 AKMVTTRVIK-----TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 A + T T + D W +T + +T+ + + L+T + ++ + Sbjct: 49 ALVTQTWTAPARGRVTVADWADRWLAS-QTGVKPSTLYRYGNLLRTHVLPTWGKHQLADV 107 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 ++D+ + +LL +G TV + LL A + G I P Sbjct: 108 THADVAVWVAKLL-------------GQGSAAGTVRQAHRVFSLLLGLAVRDGRIPRNPA 154 Query: 187 EGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLE 246 E V + R +P L+ E L ++ G ++ + Y+GLR GE+AAL VD Sbjct: 155 ERVPLPRVIRSEPRFLTHDEVERLADAA-GAEGDVIRLLAYTGLRFGEMAALRVRRVDFL 213 Query: 247 KGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 + + + +T + FG PKT+ RTV L E L + + Sbjct: 214 RRRLTIAEAVTEVGGRLEFGTPKTHQ-QRTVPLPATLAEPLARRCEGKQGDDLL------ 266 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 V + ++ AV+ AG+ P+ RHT A Sbjct: 267 ------------------VTTASGTVLRLRNWRRVVFDPAVRAAGLSDVTPHDLRHTAAS 308 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 +++GA + +GH +A M ++Y +DD Sbjct: 309 LAVSSGATVKAVQRMLGHASAAMTLDVYSGLVDD 342 >UniRef50_B5H9T3 TraSA integrase fusion protein n=4 Tax=Streptomyces RepID=B5H9T3_STRPR Length = 372 Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 76/372 (20%), Positives = 125/372 (33%), Gaps = 54/372 (14%) Query: 43 AGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNT 102 A + + +G +Y+ P+S+ K F E + W I+ +T Sbjct: 34 AQRWIDEVTASLVTG--QYVD--PRSAK----------KPFKEYAEEWRAIQ--PHRPST 77 Query: 103 MKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVD 162 K L+ E + I+ D+ ++ L G T Sbjct: 78 AKAVAQHLRCYVYPAWEKRSLGAIKPGDVQSWVTSLTTTH------------GLAASTSR 125 Query: 163 NYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLW 222 + ++ R A + I P K R K PL+ + L + + + L Sbjct: 126 TVFNTVNAVFRAAVRDRMIPHNPCAEAKLPSVPRKKIVPLAVEQVRTLSDEIPARYKGLV 185 Query: 223 KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQ 278 +GLR GEL L VDL V+V + + G PPKT RTV L + Sbjct: 186 LLGAATGLRPGELFGLQLRHVDLLHATVSVEQQIQQTAKHGVYVCPPKTARSHRTVPLPR 245 Query: 279 PALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA 338 A++A+K + F + G P + Sbjct: 246 MAVDAMKAHLRDFPADGPEGWIFTAPQGG---------------------PVVYTHFMDG 284 Query: 339 RWNAAVKRAGIRRRN-PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 W A +AGI + P+ RH +A L+ G + ++ ++GH A M IY D Sbjct: 285 SWRPACAKAGIPKGTGPHALRHHYASLLIRHGESVKTVSERLGHTNAAMTLNIYTHLWPD 344 Query: 398 MNDEQIAMLNAR 409 + A ++ Sbjct: 345 SEERTRAAVDKA 356 >UniRef50_UPI0001C37C27 integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37C27 Length = 391 Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 71/351 (20%), Positives = 125/351 (35%), Gaps = 39/351 (11%) Query: 77 TRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 T E W + E+ T + + + + S + ++ Sbjct: 63 EPCKVTLYEWLCTWLDQYCKIEVKLTTYVNYDTYVHRHIKNTIGGYKLCDLNTSIMQSFF 122 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 NE L+ G + +T+ N ++ L A I P + V +R Sbjct: 123 NEKAENGKLHSSG------GLSPKTIKNMHDMMHRALDKAVHLDMIIKNPTDFVTLPKRR 176 Query: 196 RIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 + + L+ E L E+ KG + A+Y+G+R GE+ L W+ V +E R Sbjct: 177 KSEMRFLTIDEQKKLQEALKGDRLEMPVLLALYTGMRQGEIFGLKWKYVHIESTDRAWLR 236 Query: 255 NLTILDMFG---------------PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 + ++ F PKT IRT+ L+ E L E K E Sbjct: 237 VVQAVNRFSNRTDDGKRKTFLSLSEPKTPHSIRTIPLMPYIAERLTEY--------KCEQ 288 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 + ++ G + V K + + +KR G+ N + RH Sbjct: 289 EQHFKDNGLPMSEM--------VFTTKNGNLVDPRNFQRDFKLLLKRNGLHEINVHGLRH 340 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 TFA L +G N ++ +GH + + Y +D+ E+++ LN+ L Sbjct: 341 TFATRALESGMNVKTLSKILGHSSVAFTLDTYAHVTEDLKFEEMSALNSFL 391 >UniRef50_B4V6V4 Phage integrase n=6 Tax=Streptomyces RepID=B4V6V4_9ACTO Length = 426 Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 121/352 (34%), Gaps = 31/352 (8%) Query: 77 TRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 T W + L NT + + ++ ++ + D+ + Sbjct: 74 AAADSTVSAYLAYWLDGVAVHHLRENTHTRYAASIRLHLNPGLGVKKLARLTTRDVRTFL 133 Query: 136 NELLHGETLYLDNPRSNK-----------KGRTVRTVDNYIALLCSLLRFAYQSGFISTK 184 + L N S + K + TV A+L S L A + + Sbjct: 134 DGLRTTCQCCAQNRDSVRRSCCAIGQCCGKRLSPLTVTYVHAVLKSALEHAVREDELPRN 193 Query: 185 PFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQN-LWKFAVYSGLRHGELAALAWEDV 243 VK + PL+ E L+ + G N L++ A+ +GLR GEL L WED+ Sbjct: 194 VARNVKTTTPRPRRFQPLTAAEARQLLHAANGDRLNALYELALRTGLRKGELLGLHWEDL 253 Query: 244 DLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 DL+ G + R+L G KT A R + L L +LK + R++ Sbjct: 254 DLDGGTATIHRSLQRTRSQGLTVLNTKTLASDRRIALPTECLNSLKTHQERQQEERQTAG 313 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 T + VF ++L R+ + A +R + RH Sbjct: 314 TSWT---------DNGLVFTT-----PNGQPLDPTNLTRRFRRLLHGAELRTIRFHDLRH 359 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + A LL G + I +GH + +Y + + I L + LS Sbjct: 360 STATLLLEQGVDLVVIKELLGHAHIGVTAGVYAHVRLRLQHQAIDTLGSILS 411 >UniRef50_A3DCS0 Phage integrase n=6 Tax=Bacteria RepID=A3DCS0_CLOTH Length = 506 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 77/399 (19%), Positives = 143/399 (35%), Gaps = 41/399 (10%) Query: 29 TLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF----PQSSTGAKMVTTRVIKTFG 84 TL+ + A L +HEI + Y + G T V F Sbjct: 117 TLEAYYNHEKTKNHASKKTILQIHEIITLSLNYAIELGWIESNPAKGINPATDEVSVLFV 176 Query: 85 ELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETL 144 + W ++ T + T S ++ I + +DI L Sbjct: 177 DFLLEWLEMMRTRVRETTYASYNSGIRQSIIPYFMDK---KLTLTDIEENPKYLQDFYQH 233 Query: 145 YLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSK 204 L KG + +V A + L+ A+ G I + P + +++ ++ + Sbjct: 234 ELS------KGLSPNSVLRRHANIRKALQHAFHLGLIKSNPADRIERPKKQDYTASYYTD 287 Query: 205 TEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKG--IVNVRRNLTILD- 260 E L ++ KG L A Y GLR E+ L W+ +D + ++ +T ++ Sbjct: 288 EELAKLFKAAKGDPLELPIVLAAYYGLRRSEIIGLRWDAIDFNPDDPKITIQFTVTEVNF 347 Query: 261 ---------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 K+ A RT+ L++P + L ++ K ++R+ + Y+ +Y Sbjct: 348 GDGQGNVIIEKEGTKSKASKRTLPLVKPIADLLLQKKKDIENNRRLCGSCYNDKY----- 402 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 L FV + + + + + +++ G+++ + RH+ A L G + Sbjct: 403 --LDFVHVNEIGER-----MKPNYISQHFALLLEKHGLKKIRFHDLRHSCASLLYANGVS 455 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 I +GH IY D N + IA NA L Sbjct: 456 LKQIQEWLGHSDISTTANIYTHL--DYNSK-IATANAIL 491 Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 69/228 (30%), Gaps = 36/228 (15%) Query: 11 RGRYIRIWFMFR---GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 + Y I ++ GKR +++ N KKA + F+ P+ Sbjct: 9 KNGYYHIILNWKDGDGKRRSKSISTGLPVKGNKKKAEAMLLE-----ARKTFK-----PE 58 Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPIS--H 125 K V D W K K + T + +S + Sbjct: 59 DIASGKNTPYHV------FLDRWLKDKMNDFDEETYAVYSHNARVFIGPYFKSLNLQLHE 112 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 IR S + Y N K + +T+ ++ L +A + G+I + P Sbjct: 113 IRTSTLEAYYNH------------EKTKNHASKKTILQIHEIITLSLNYAIELGWIESNP 160 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHG 233 +G+ + L +E + + + + SG+R Sbjct: 161 AKGINP---ATDEVSVLFVDFLLEWLEMMRTRVRETTYASYNSGIRQS 205 >UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius RepID=A0JQR3_LACS1 Length = 381 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 62/339 (18%), Positives = 123/339 (36%), Gaps = 38/339 (11%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 FG++ D W + + + +T + + + + + I ++ N+ Sbjct: 70 FGDVLDEWLALHKETVKASTWQFIELRANNHVRPYFKDMYVDKITLRHCQDFVNKTFKKA 129 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN----RIK 198 + ++++ + L +A + G I + P V K ++ Sbjct: 130 PVAYVYS---------------LSIVKNTLDYALRLGMIESNPMLYVIKPKKQASISDKH 174 Query: 199 PDPLSKTEFNALMESEKG---QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 + +K E ++ K + L++ YSG+R GE AL W D+D + + + + Sbjct: 175 DNYYNKDELKKFLDVAKDTSLKKYTLFRLLAYSGMRIGECLALTWHDLDYKNNTIAINKT 234 Query: 256 LTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 L + PKT A R ++L ++ LK RK + G Sbjct: 235 LARTNNGIKIQTPKTKASNRVISLDNETIQVLKM---WQLEQRKQLLKV-----GINAMD 286 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 +F NGK + V ++ K+AGI + RHT A L +G + Sbjct: 287 SKQLIF----SNGKNS-FIIVPTVRLAIKQIAKKAGIHSITTHGFRHTHATLLFASGLDI 341 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + +++GH Q IY + + D+ ++ Sbjct: 342 KQVQARLGHSNVQTTLNIYTHAMKEKQDKIGDEFAKYIN 380 >UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus cereus group RepID=A7GRV3_BACCN Length = 376 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 130/339 (38%), Gaps = 41/339 (12%) Query: 77 TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 F +L +IW + KET +T+ + K L++ + +S+I+ + N+ Sbjct: 57 ENNDIRFSQLVEIWMQEKETTCRPSTLYQYKRILRSRVMPEFGDKKLSNIKPLTVHNFHQ 116 Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 +++ K+G T + + + +L +L + IS+ P + K+ + + Sbjct: 117 KMI-------------KEGLTTKYISSVDVMLKQILDKGVELEMISSNPAKKAKRPKVKK 163 Query: 197 IKPDPLSKTEFNALMESEK--GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 + + ++ K G + A+++G+R GE+ AL W D+D EK ++V+R Sbjct: 164 KAQASWTIEQAMTFIDCAKLKGSYYIAFVLALHTGMRIGEVLALQWGDIDFEKKTIHVQR 223 Query: 255 NLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 LT++D + G KT A R + + + ++ L E K + + Sbjct: 224 TLTLVDGKYVLGETKTEASNRVIPMTEELVDELVEYQKYKKENPLDLLIC---------- 273 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 + K ++ + A + + + R TF L+ + N Sbjct: 274 -------------TRNKKIVHPYTIRYQMKALCEAIDVPYIRFHDIRRTFTTILIDSNVN 320 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 +A +GH IY ++ E L L Sbjct: 321 AKVVAKLLGHTNVSTSLNIYTDVYEERQIEAAEKLQNAL 359 >UniRef50_A4J1T6 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1T6_DESRM Length = 383 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 75/390 (19%), Positives = 141/390 (36%), Gaps = 53/390 (13%) Query: 25 RCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFG 84 + + ++G++ T K+A A ++ E +G + S T G Sbjct: 27 KRKRMVRGFKGTK---KEAEKEMARLIAEYETG-----QYIEPSKTC-----------LG 67 Query: 85 ELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGET 143 + W + + L T ++ I S I ++ + Y ++ L Sbjct: 68 DYMLRWLEDYGKPNLAPTTYYSYSKIVEKHIIPSIGSIIIEKLQPMHLQRYYSQKLQT-- 125 Query: 144 LYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLS 203 + RTV + +L L A Q ++ P + V+ + + + + Sbjct: 126 ------------LSNRTVQYHHRVLKEALSHAVQWQLLNRNPADAVQAPKNKQKEIELPD 173 Query: 204 KTEFNALMESEKGQSQNLWKF-AVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL--- 259 + + ++++ K ++ AV++G+R GEL L W+D+D +K ++ VR L L Sbjct: 174 LSNIDRMIQASKDHPDHIIIISAVFTGMRRGELLGLRWQDLDFDKNLLYVRNTLQRLPDK 233 Query: 260 -DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVF 318 F PK+ R + + LK+ K R Y Q VF Sbjct: 234 GKFFTEPKSKKSRRQIIIPHFLTNLLKDHRKKQLEERFKLGHLY---------QDHDLVF 284 Query: 319 MPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQ 378 ++ R+ A V + G+ + RH A LL NP + + Sbjct: 285 P-----RPDGTPADPGTVSHRFKALVDKIGLSGLRFHDLRHFHATLLLAENINPKKVQER 339 Query: 379 MGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 +GH+T + ++Y I M +E L Sbjct: 340 LGHQTISLTLDVYSHLIPSMQNEIAEKLEE 369 >UniRef50_C1IAU4 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAU4_9CLOT Length = 390 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 71/380 (18%), Positives = 136/380 (35%), Gaps = 45/380 (11%) Query: 46 LRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWT-KIKETELTTNTMK 104 +R + + + + S+ + I T E +IW + K EL +T++ Sbjct: 37 IRKQFYGKTKREVLDKMNDYRDKSSRGLIAKDEKI-TLEEWYNIWLFQFKANELKASTIE 95 Query: 105 KTKSQLKTLRII-ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 + + + + I NY N L+ K G+T TV Sbjct: 96 RYNVFYRNYIKGCNIGQVKLKDLTAPIIQNYYNSLI-------------KNGKTPYTVKM 142 Query: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKLQ---RNRIKPDPLSKTEFNALMESEKGQ-SQ 219 L S L +A + +I + V + ++ K + E M K + Sbjct: 143 LHKALKSSLSYAKRINYIGINCCDNVIPPKVINKDDDKFKVFTLEEQKKFMNVIKDHKYR 202 Query: 220 NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMF-----------GPPKTN 268 ++ A+ +G+R GEL AL W+D++ ++ + V ++++ + PKT Sbjct: 203 LMFILALGTGIRIGELVALKWDDINFDECTLKVNKSISRSYIEIEGKRKFLLEETTPKTR 262 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 + IR V + L+ L K ++ + Y ++VF + Sbjct: 263 SSIREVGIPSNILKELINHRKEQDEYKDNYKEIYT---------DNNYVFTDAL-----G 308 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 Y +L + +K I + RHT+A L G + +GH + ++ Sbjct: 309 RYILPDTLSKAYLKVLKDNNIPHTRFHSLRHTYATRLFEKGVPLKTVQKLLGHSSIKITA 368 Query: 389 EIYGMWIDDMNDEQIAMLNA 408 +IY I + + LN Sbjct: 369 DIYTHVIGNEKISAVEKLND 388 >UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus RepID=C2E2T4_LACJO Length = 386 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 110/336 (32%), Gaps = 39/336 (11%) Query: 86 LCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLY 145 + ++W E + T+ TK+ K + + + I N+ Sbjct: 77 IYEMWLANYELTVKPTTLLNTKACFKNHILPVLGELYVEKISTFRCQKALNKWFSDL--- 133 Query: 146 LDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP---L 202 + +L +L +A + I P + V K + + K + Sbjct: 134 ------------PKMYRKVYSLSSKVLDYAVNNDLIVKNPMKRVIKPKMQKDKREFTNFY 181 Query: 203 SKTEFNALMESEK----GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 SK E N +++ K + ++ Y+G+R GE AL W D+D E + + + L++ Sbjct: 182 SKEELNKYLDACKQKKNPRVYLFFRLLAYTGMRKGEALALKWSDIDFENETIRINKTLSL 241 Query: 259 LD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL 314 + G PKT A RT+ + + + L+E K + + +L Sbjct: 242 GTHNSLVIGTPKTKASNRTIQVDEQTIYYLQEWRKRQRKE------LFKVGFNALTDDQL 295 Query: 315 HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF 374 F + + K A ++ + RHT A L AG Sbjct: 296 LF-------SNGNNQLIRPWLVQYWNKTIAKDARLKHITVHGFRHTHASLLFEAGTPMQD 348 Query: 375 IASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + ++GH +Y + + Sbjct: 349 VKERLGHSDITTTMNVYTHVTKSEKKKTAEKFARFM 384 >UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, phage integrase n=10 Tax=Bacillus cereus group RepID=C2Z776_BACCE Length = 379 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 123/334 (36%), Gaps = 35/334 (10%) Query: 86 LCDIWTKIK---ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 + DIW K+K + EL + +K S +K + I I+ I +Y EL Sbjct: 65 VLDIWGKLKPIRKAELKITSYEKDMSLVKLYILPTFGYKKIKSIKPVIIQSYYAEL---- 120 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 +KG + T+ N + + A + + VKK + + + Sbjct: 121 ---------KEKGLSNGTISNIHRCFRCIFKHAVEWEILHDNIMNKVKKPREEQGEMKTW 171 Query: 203 SKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 S E N + K + + A+Y+G+R GEL AL W+D+D + + V ++L Sbjct: 172 SSKECNRFLHYLKEKNKKYYIFFLLAIYTGMRRGELLALTWKDIDFDNKRILVNKSLVKT 231 Query: 260 DM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 + KT + R++++ + L+ Y + E +H Sbjct: 232 EEGLFKAATKTKSSNRSISISSFVVTELQSYYAYKKKEFFRWGIHLNEEAYIFAGNTIH- 290 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 + + K+AG+ R + RHT A +L AG +P + Sbjct: 291 ------------SPLHIDAPHRFLKDHYKKAGVPRIRIHDLRHTHATLMLQAGEHPKIVQ 338 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 ++GH + QM + Y +M + + Sbjct: 339 DRLGHSSIQMTLDKYSHITQNMQQQAAENFENVI 372 >UniRef50_C9R814 Integrase family protein n=2 Tax=Ammonifex degensii KC4 RepID=C9R814_AMMDK Length = 391 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 65/348 (18%), Positives = 117/348 (33%), Gaps = 34/348 (9%) Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 + ++ T L + W + NT+ ++ + +I + + Sbjct: 52 AHRGELGRAPRGLTVAGLLNAWVEAHRRSWRPNTLANKRTAARAWGRLI-GHLEVERLTP 110 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 +D+ L T + LR+A + + P EG Sbjct: 111 ADVELALARLAEE--------------YAPSTAKEVFSSFRQALRWARKRKLLHHDPTEG 156 Query: 189 VKKLQRNRIKPDPLSKTEFNALMES-----EKGQSQNLWKFAVYSGLRHGELAALAWEDV 243 V + + P + E +E + + ++ A+ +G+R GEL AL W+DV Sbjct: 157 VPAPRGETQEITPWTGEEAARFLEYLEKARMRKAYKAFFRLALATGMRLGELQALRWQDV 216 Query: 244 DLEKGIVNVRRNLTILDM-FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 DL++G V VRR + F PKT R + + L+E K R Sbjct: 217 DLKRGEVCVRRTYSEAGKCFHEPKTKKARRRIPIDPVTTAWLREWRKEQLEERLRA---- 272 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 G + VF R L A + AG+ + RHT A Sbjct: 273 ----GEGWADREGLVFTTRKGT-----VVDRDDLLRALRRACREAGVPGIRFHDLRHTHA 323 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 LL +P + ++GH + + ++Y + + + + L Sbjct: 324 SLLLRQNVHPKVVQERLGHASVKTTLDLYSHLLPGAQEPAVRAVAELL 371 >UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK9_ENTCA Length = 410 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 125/347 (36%), Gaps = 41/347 (11%) Query: 78 RVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNE 137 + F ++ W + + + +T + L + + IS I N Sbjct: 62 ESNRLFSDIALEWFEQYKNTVKESTYVVQRVALNKHILPLFGERRISKISIPYCQKQVNH 121 Query: 138 LLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR--- 194 Y N I + S+ ++A I P EGV + +R Sbjct: 122 WYSYYKKY----------------SNLIGMTNSIFQYAKSLRLIRRNPMEGVIRPKRQKQ 165 Query: 195 ---NRIKPDPLSKTEFNALMESEKGQS---QNLWKFAVYSGLRHGELAALAWEDVDLEKG 248 + +K E ++ K ++ ++GLR GEL AL W+D+D ++G Sbjct: 166 IDEEKYTAPFYTKAEVLYFLQIAKKYPDPLYPMFHILTFTGLRKGELLALRWKDIDFKRG 225 Query: 249 IVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 ++V++ LT ++ F PKT +RT+++ L ++ F+ + Sbjct: 226 TLSVKQTLTTVEDWKLAFQTPKTEKSLRTISIDNQTLSIFRQCILKQKA-------FFLK 278 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW 364 + + +F + KPYY + L +K ++ + RHT Sbjct: 279 TGRKPVENGAQLLFTTE----ENKPYY-LDFLNHNLTKILKENKLKHMTVHGFRHTHCSL 333 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 L +GA+ + ++GH + +IY + +E ++ Sbjct: 334 LFESGASIKEVQVRLGHTDVRTTMDIYAHVSEQKKEETADRFADYMN 380 >UniRef50_Q1CP24 DNA integration/recombination/inversion protein n=7 Tax=Streptococcus RepID=Q1CP24_STRPF Length = 387 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 76/381 (19%), Positives = 139/381 (36%), Gaps = 51/381 (13%) Query: 44 GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTM 103 G R + + + ++L S G+ + VIKTF EL +W + + + T Sbjct: 43 GRTRKEVNQKAKHAQLDFL------SNGSTIKRKVVIKTFKELSHLWLETYKLTVKPQTY 96 Query: 104 KKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 T ++L + + + I SDI N L Y Sbjct: 97 DATVTRLNRHIMPTLGNMKVDKITASDIQMLINRLSKYYVNYTA---------------- 140 Query: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKLQRN---RIKPDPLSKTEFNALMESEKGQSQ- 219 +++ +L+ G I + ++ + K + ++ + +E + Sbjct: 141 VRSVIRKVLQQGVLLGLIDYNSARDIILPRKQPNAKKKVKFIDPSDLKSFLEHLETSQHK 200 Query: 220 --------NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI-LDMFGPPKTNAG 270 L++ + +GLR GE AL W D+DLE G + + + L KT +G Sbjct: 201 RYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYNKNLKFLSTAKTQSG 260 Query: 271 IRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPY 330 R +++ + L +LK Y++ +E+ E V + Y Sbjct: 261 NRVISVDKKTLRSLK-LYQMRQRQLFNEVGARVSE---------------VVFATPTRKY 304 Query: 331 YSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEI 390 ++ S + + K AGI R + RHT A LL AG + + ++GH M + Sbjct: 305 FNASVRQSALDTRCKEAGIERFTFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDT 364 Query: 391 YGMWIDDMNDEQIAMLNARLS 411 YG D E + ++ Sbjct: 365 YGHLSKDKEKEAVLYYEKAMN 385 >UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium RepID=D0ADR3_ENTFC Length = 382 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 65/349 (18%), Positives = 126/349 (36%), Gaps = 42/349 (12%) Query: 75 VTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNY 134 + TF E+ D+W E + ++ KTK Q + + I+ I + Sbjct: 61 LNKTKELTFQEVYDLWIVNYEQTVKESSFVKTKEQFANHILPAFGAYKINKITIDIAQKF 120 Query: 135 RNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR 194 NE + LY + ++N + +A + G++ P + + +R Sbjct: 121 ANEKVKKFVLYREF------------INNA----SRICDYAIKLGYLQDNPLKKITVPKR 164 Query: 195 N-----RIKPDPLSKTEFNALMESEKG----QSQNLWKFAVYSGLRHGELAALAWEDVDL 245 + SK E ++S + + + ++ ++G+R GEL AL W+D+D Sbjct: 165 KVSVHEEDTLNFFSKEELEIFLKSVEKKKDIRMYSFFRTLAFTGMRVGELLALTWKDIDF 224 Query: 246 EKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 + + + L PKT R + + + LK+ Sbjct: 225 NDNYIKINKTLARGKNRRLYVEQPKTKNSKRDIPVDDETMNILKKWRLEQRK-------- 276 Query: 302 YHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTF 361 + G K VF ++ Y +S +K+ ++R + RHT Sbjct: 277 WLLTLGINTLSKNQLVFSN-----QKNEYLQLSKPRKWLEVIIKQNNLKRITIHGLRHTH 331 Query: 362 ACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A LL AGAN + ++GH + Q+ ++Y D ++ + Sbjct: 332 ASLLLEAGANIKDVQERLGHSSIQITMDLYIHITDKRKEKTATQFAKYI 380 >UniRef50_D0S8U2 Phage integrase n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0S8U2_ACIJO Length = 386 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 99/415 (23%), Positives = 167/415 (40%), Gaps = 49/415 (11%) Query: 2 SKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEY 61 +PTGV IR I+I+F R K TL + I A +RA +V + G Sbjct: 8 KSMPTGVRIRNGAIQIYFERRKKEYNITLPH-PPSAEGISAAAKIRAQLVTKAEWGILTD 66 Query: 62 LRRFPQSSTGAK--MVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 V F E+ + K E+ T+T K + L+ + Sbjct: 67 SDIAEARGQLVDDDAVIVNGGILFQEVAQKYLKFCESN--TDTKKGYLNILEFHWMGYFA 124 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 PI+ I +I + + +T +T++N + L + A ++ Sbjct: 125 LMPINSISIENIKEAIID---------------RDFKTAKTLNNCLIPLRGVFDCAMENK 169 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-------SQNLWKFAVYSGLRH 232 FI+ P + ++ + PDP S+ E +A++E+ K ++ A ++G R Sbjct: 170 FITENPLDSIRNKKVQVDIPDPFSRPEMDAILENLKTTLKGDEILYYWYYELAFWTGCRP 229 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 EL AL D D G+ V ++ KT+ R V L + +A +E K Sbjct: 230 SELIALKESDFDFFSGMFKVNKSRVRGVEKNVTKTHTA-REVCLNARSKKAAQELIK--- 285 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 Y + + ++ + C +P+++ R AA+K GIR R Sbjct: 286 -------------YKKDRNIQSKYLML---CPETGEPFFNEKPPRNRLVAALKACGIRHR 329 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID-DMNDEQIAML 406 Y+ RHT+A +L G NP F+++QMGH QM+ + Y W+ D N ++ L Sbjct: 330 PAYNARHTYATMMLMDGLNPVFVSNQMGHS-LQMMMKRYAKWMHGDKNKIEMGKL 383 >UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X726_NAKMY Length = 371 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 120/348 (34%), Gaps = 35/348 (10%) Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 M T W + + +T +S + + +S + Sbjct: 54 NDRAAKNMPAPPPSLTVEAYLGEWLTHMKQHVRRSTWVAYESNARLHIVPRIGRKKLSQL 113 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 D+ + L K G+ RTV A L + L AY+ ++ Sbjct: 114 SVRDVRLMIDGL-------------RKDGKGKRTVQYVHATLRAALEHAYREELVTRNVA 160 Query: 187 EGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDL 245 + V+ + +PLS E L+ + + LW + GLR E+ L W++VDL Sbjct: 161 KMVRVERPTPTPKEPLSVAEARRLLTATRDDEDHALWVVMLLLGLRRSEVCGLRWDNVDL 220 Query: 246 EKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 E ++V ++ +D P KT RTV L +AL + Y Sbjct: 221 ENRTLSVTHSVQRVDGKLRELPTKTRRSTRTVPLPAMVHQALVTHRAAMMPTSQ-----Y 275 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 E +VF ++ +L RW +R GIRR + RH+ Sbjct: 276 LPEP--------VYVFGTKIGT-----PMEPRNLTRRWVTLAERQGIRRVPLHALRHSCV 322 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 LL G +P + +GH +M +YG + + L+ L Sbjct: 323 SLLLAQGVHPRTVMEIVGHSAIEMTMNVYGHVNLETQRRALDELDRTL 370 >UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GET2_9FIRM Length = 386 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 130/337 (38%), Gaps = 29/337 (8%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 TF E +IW K+ + +T ++ + + I+ + +E G Sbjct: 69 TFTEWFEIWLASKKNNIKPSTYDTYETFWRVHIKSALGHMKLDKIQPHHVQKLLDEKQGG 128 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG--VKKLQRNRIK- 198 E + R+V + + L+ A + IS P + ++ + +IK Sbjct: 129 E-------------LSPRSVRYIHTTINTALKSALKQRIISFNPADAELLELPKNTKIKE 175 Query: 199 PDPLSKTEFNALMESEK-GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT 257 PL++ + A + + K + + ++ G+R GE+ L WE++D E+ + ++ NLT Sbjct: 176 VKPLTQDDVKAFIATAKEDKFSVAYILSLALGMRKGEVLGLQWENIDFEQKTLTIKNNLT 235 Query: 258 ILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK 313 + G PKT + R V L + L L E + R EI +Y E Sbjct: 236 RVKGKGLVLTTPKTASSNRVVLLPEKILTLLSEHGRKQAVER--EIAKASGKYSEAEG-- 291 Query: 314 LHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPA 373 F V ++ ++ +++AG+ + + RH++ AG N Sbjct: 292 ----FDNMVFTYEEGKPVCPRYFERKFKKVLEKAGLSQAGLHSLRHSYGTLQNEAGVNMK 347 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 I + +GH A +Y ++ E ++ L Sbjct: 348 AIQATLGHSKASFTMSVYTQNTTELQREATQAVDKWL 384 >UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp. ACTE RepID=D1XEM4_9ACTO Length = 435 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 131/349 (37%), Gaps = 33/349 (9%) Query: 82 TFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNEL-- 138 + W + + +L NT + + + I ++ + D+ + N+L Sbjct: 78 SVSAYLTYWLEAVAVHQLRENTHTRYTTCVNQHLIPGLGKKKLAKLTAKDVRTWLNQLRT 137 Query: 139 -----LHGETLYLDNPRSNKKG------RTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 + + D PR G + T+ ++L S L A + I+ Sbjct: 138 TCQCSVRAIDAHRDQPRCCAAGTCCSKRLSPLTLAYIHSVLKSALEHAVREEEITRNVAR 197 Query: 188 GVKKLQRNRIKPDPLSKTEFNALMESEKGQSQ-NLWKFAVYSGLRHGELAALAWEDVDLE 246 V+ + +PL+ E + + + L++ A+ +GLR GEL L W+D+DL Sbjct: 198 NVRTGTPRPRRFEPLTADEARQFLAAVRNDRLFALYELALRAGLRKGELLGLQWKDLDLH 257 Query: 247 KGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 G ++RR L G P KT A R + L + + KE + RK+ + Sbjct: 258 NGTASIRRTLQRTQTGGLTALPTKTRASERRIALPSECIHSFKEHRAVQEGERKAAAEGW 317 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 + VF ++L ++ ++RAG+RR + RH+ A Sbjct: 318 ---------KDNGLVFRTSAGG-----PIDPANLNRSFHTLLERAGLRRIRFHDLRHSTA 363 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 LL G I +GH + +Y + + + L++ L+ Sbjct: 364 TLLLEQGVELVVIKELLGHAHIGVTATVYAHVRLRLQRQAVETLSSTLA 412 >UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=15 Tax=Bacillus RepID=Q65EQ4_BACLD Length = 364 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 127/335 (37%), Gaps = 41/335 (12%) Query: 76 TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 TF + + K + ++ KT S + T I S I++IR DI+ ++ Sbjct: 56 ENEDNPTFEFVAKEYLKWYKKRRKASSYLKTSSIINTHLIPRFGSKKINNIRSRDIMRFQ 115 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 N+LL V V +L ++ FA + + P + Sbjct: 116 NDLLDR--------------YAVAHVKKIHQVLSAVFNFAIKQEYTKDNPARLAGNVDIE 161 Query: 196 RIK-PDPLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 K + + EF A ++ Q L+ YSG+R GEL AL W D+D + +N+ Sbjct: 162 EDKHINYWTLDEFKAFIQHVDDQLYYALFMTLYYSGMRKGELLALTWGDIDFDSNTINID 221 Query: 254 RNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK 313 + + + PKT + IR + + + + L Q K + + + F Sbjct: 222 KTV-YNRIVTKPKTTSSIRKIMMPKHVMRLL-AQLKAKTKTKMTYVVF------------ 267 Query: 314 LHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPA 373 G+ + S ++L ++ VK A +++ + RH+ A +L+ P+ Sbjct: 268 -----------GEFHDHISTTTLDRKYAEYVKAAKVKKIRLHDFRHSHASYLINRNTIPS 316 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 +A ++GH+ IY E + + Sbjct: 317 VVAKRLGHKDVGTTLNIYSHLYPSTEKEAVLKMED 351 >UniRef50_Q30S15 Phage integrase n=2 Tax=Campylobacterales RepID=Q30S15_SULDN Length = 393 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 78/393 (19%), Positives = 156/393 (39%), Gaps = 60/393 (15%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 G+R R T K T N+K ++ +I G + T Sbjct: 32 GERQRGTTK-LRATAENLKVIKR---QVIPDIYEGL---------GKEPIGIEEEAKTWT 78 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 + + + ++++T++ +T+++ + I +I ++N+LL Sbjct: 79 LQDFAEEFFELQKTQIRPHTLERNIMHYNNHIAPYFGKRELGRITPLEIERWQNQLLQKY 138 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR----IK 198 TV + ++L S+ A + + P E V + + Sbjct: 139 KHL--------------TVQKFRSILFSIYDKALHNDLVLKNPLEKVTAPKVQNNIKIEE 184 Query: 199 PDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 +P ++ E N ++E G +N K +G+R GE+ AL W D+D EK + V R Sbjct: 185 INPFTEKELNQIIEHANGYMKNFIKLMAATGMRPGEIIALKWSDIDFEKRTIKVERTRLR 244 Query: 259 LD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK 313 + G K + R V +L ++L Q +LT + SE F Sbjct: 245 AKKGEDIVDGLTKIKSSNRFVDMLNATHDSLMAQLELTSN---SEYIFL----------- 290 Query: 314 LHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPA 373 N P+Y+ +G + +K++G++ R Y+ RHTFA +++ GA+ Sbjct: 291 ----------NQSNMPFYNHDIIGVNFRKILKQSGVKARPLYNLRHTFASQMISKGADIT 340 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 +++ +GH+ + +IY +I + ++ ++ + Sbjct: 341 WVSKMLGHKDVSITLKIYTKFIQEDDETRLKKI 373 >UniRef50_A7N7U1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7N7U1_VIBHB Length = 341 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 89/331 (26%), Positives = 156/331 (47%), Gaps = 21/331 (6%) Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 + ++ + T + + ++ + +T K + L STPI +R Sbjct: 8 AKAAKEIDMSNSQITVTQYIKKFLHSRKFAVKPSTFISEKCKANKLTR-YFGSTPIDAVR 66 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 +SDI+ +EL + + ++++ ++ +L ++ A + G + P Sbjct: 67 HSDIIEMLDEL--------------HERYSNKSINEFLTILRAVFLRAERDGVVDRNPMN 112 Query: 188 GVKKLQRNRIKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAWEDVDLE 246 G+K L+ + P+P +K E + L ++ Q +N + VY+GLR EL AL+WED+D E Sbjct: 113 GIKNLKAIKPIPNPFTKKELSQLHQTLGCEQGKNAVELDVYTGLRISELLALSWEDIDWE 172 Query: 247 KGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 ++ VRR +L + KT R V L + A++ALK Q+ LTG +I+ + Sbjct: 173 NRVLLVRRA-KVLQSYKTTKTKESTRKVELNELAIQALKRQWALTGQLEAVKISVLQDDN 231 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW-NAAVKRAGIRRRNPYHTRHTFACWL 365 ++++H VF N +P+ + + A +++AG+ R RHTFA Sbjct: 232 KSYIEERVHIVFYNSQTN---QPFLHAAQFNNTFFRAFLEKAGVAHRGVGQLRHTFASQN 288 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWID 396 LTAG +IA QMGH M+ + YG WI Sbjct: 289 LTAGIAKDWIAMQMGHADTSMIDDHYGQWIP 319 >UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integrase n=3 Tax=Lactobacillus RepID=Q38Y39_LACSS Length = 385 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 76/399 (19%), Positives = 143/399 (35%), Gaps = 52/399 (13%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK R T +G+ K+A +++ + +SG+ + + T Sbjct: 28 GKEKRTTRRGF----KTRKEARLALSMLELQADSGQLD---------------QQPINLT 68 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F ++ W + +TM K K + + I I S + N+ + Sbjct: 69 FEDVYQQWWAGYINTVRESTMYKQKKVFQNHILPAFGKYRIRTITTSQVQTTLNKWFK-Q 127 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP--D 200 T Y P N ++ ++A G+I P V ++ + + Sbjct: 128 TDYSFKPWFNYT--------------SAIFKYAILQGYIKDNPCTRVTMPKKLDKEDTLN 173 Query: 201 PLSKTEFNALMESEKG----QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL 256 K + + L++ ++G+R GE +L W+D++++K +++ + L Sbjct: 174 FWDKDQLKTFFNGIDPVNDLEKYTLFRVLAFTGIRRGECLSLTWDDLNVQKATLDINKTL 233 Query: 257 TILDM----FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 T D P KT G R ++L + L LK+ H + + Y + Sbjct: 234 THGDKGRLLIQPTKTKKGTRVISLDESTLLYLKKW------HLEQRRMYLMLGYNINKSN 287 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 +L F P + +L N A + + RH+ A L +AGA+ Sbjct: 288 QLIFATSKNTFKSLNTPSKWLRALIDDANK--SGANLPSITVHGFRHSHASALFSAGASI 345 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + ++GHE AQ IY + E + L L+ Sbjct: 346 KEVQERLGHEDAQTTLNIYTHVTEKQGQEAVQKLVNFLN 384 >UniRef50_Q9F0J7 Integrase-like protein n=7 Tax=Staphylococcus RepID=Q9F0J7_STAAU Length = 378 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 117/345 (33%), Gaps = 38/345 (11%) Query: 77 TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 I TF E+ ++W + + + +T ++ + T + + PI I N Sbjct: 61 NNDITTFKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVIN 120 Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 + NKK ++ + Y ++ ++A I PF K ++ Sbjct: 121 K-------------WNKKYSDIKAIRIYT---SNVFKYAVSLKIIVDNPFAHTKAPRKKE 164 Query: 197 IKPD----PLSKTEFNALMESEKGQ--SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 + D S E + + +++ ++G R GEL AL W D+D K + Sbjct: 165 AQQDASTKYYSSDELKQFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTI 224 Query: 251 NVRRN----LTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 ++ + + PKT + RT+++ LK +Y Sbjct: 225 SINKTCARGANYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQR--------VESLKY 276 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 G K VF N P + + ++ +R + RHT L Sbjct: 277 GHNTSDKHQHVFTTVRDNKPLYPEHC----NKALDLICEKNSFKRIKVHGFRHTHCSLLF 332 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 AG + + ++GH + +IY + D+ ++ Sbjct: 333 EAGLSIQEVQDRLGHGDIKTTMDIYAHVTEKQRDQVADKFAKYIN 377 >UniRef50_C0EC03 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC03_9CLOT Length = 440 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 76/410 (18%), Positives = 133/410 (32%), Gaps = 49/410 (11%) Query: 22 RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIK 81 GKR + + + N A N+ I E + + + + Sbjct: 46 NGKRKPKWIPTHKKVKGNKTWANNMLPTIRKEWTEKLLQEAT--ASQQSASPSGPSSAAI 103 Query: 82 TFGELCDIWTKIKETE----------LTTNTMKKTKSQLKTLRIIICESTPIS--HIRYS 129 +F + W + K + +T + QL P++ + Sbjct: 104 SFVDFLYQWLEYKYKSATGRVMDSKPIELSTYSGYEQQLNNPIAPYFREHPVALCDLTKQ 163 Query: 130 DILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV 189 DIL + + L TV +Y AL+ L +A I + P + + Sbjct: 164 DILAFYEKELERVK--------------PTTVKHYHALIHGALNYAVDKNLIPSNPADRI 209 Query: 190 KKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFA-VYSGLRHGELAALAWEDVDLEKG 248 + K D +E L E KG L + GLR E+ L W D Sbjct: 210 IISKPEPFKGDYYLDSEVLNLFEVIKGHKIELVVLLTAFYGLRRSEVIGLKWSAFDFNHN 269 Query: 249 IVNVRRNLTILDMFG--------PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 ++R +T ++ G K + +RT L+ E L E K +RK Sbjct: 270 CFSIRHTVTTCNVKGERVTIKKDKAKNKSSLRTYPLIPFLKERLLEAKKQQEENRKLCGR 329 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 Y++EY L +V + + N + + + + + + +R + RHT Sbjct: 330 AYNKEY-------LGYVCVDVIGN-----LIKPNYVSSTFGKLLAKNNLRHIRFHDLRHT 377 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A LL G + +GH +IYG + A + + Sbjct: 378 CASLLLANGVPMEQVKEWLGHSEISTTVDIYGHLQYATKKQSAAAIEQDI 427 >UniRef50_A8LF05 Integrase family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8LF05_FRASN Length = 416 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 125/350 (35%), Gaps = 37/350 (10%) Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKE--TELTTNTMKKTKSQLKTLRIIICESTPISHI 126 S + T F + W +E +T + + S + + Sbjct: 78 SKADGLTTLDRRSRFADFLTYWLDEIVDPSERAESTKSNYRVMVNNHIRPALGSRRLVEL 137 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 ++ D+ + N R G + T+ ++L L A + IS Sbjct: 138 KHEDLQRFLN-------------RKAADGYSTSTMRTLRSVLRQALNEAVITEKISRNVA 184 Query: 187 EGVKKLQRNRIKPDP--LSKTE-FNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDV 243 E ++ + + K + LS+ + L E++ + L+ GLR GE AL W D Sbjct: 185 ETLRVPKARKPKRNVAALSRDDGLRLLAEAKSTRHYALYVLLAMVGLRRGEALALRWSDF 244 Query: 244 DLEKGIVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 D G + V R +T + + GP K+ AG RT+TL + L+ HR++ Sbjct: 245 DESAGTLRVVRQVTRVSGVKGLVVGPTKSQAGTRTLTLPTRCVRVLQAHRTAQHAHRQAA 304 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 ++ +F V + L + +RAG+ P+ R Sbjct: 305 G---------KRWKENGLIFPSTVGT-----HMEPRGLNTHLSKLCQRAGLPHLGPHALR 350 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 HT A G + I +GH +IY +D ++ + + L+A Sbjct: 351 HTAATMAYALGVDWKQIQQMLGHTMLSTTMDIYVDLVDSVHRDAASKLDA 400 >UniRef50_D1PRY2 Site-specific recombinase, phage integrase family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRY2_9FIRM Length = 391 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 71/402 (17%), Positives = 139/402 (34%), Gaps = 50/402 (12%) Query: 19 FMFRGKRCRETLKGWEI----TNSNIKK-AGNLRALIVHEINSGEFEYLRRFPQSSTGAK 73 + + G R + K T S KK L E+ Sbjct: 20 YDYEGNRLKAAQKTVHPPKDLTPSQCKKWLNEQAVLFEREVRHD---------------- 63 Query: 74 MVTTRVIKTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDIL 132 T + W + + L +T + + ++ + ++ +R I Sbjct: 64 PQPVNHAMTLAAYTEHWLRDIAPDKLAASTYSRDQQDIRR-ILPALGHYKLTDLRKETIR 122 Query: 133 NYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL 192 + + L ++ + + R+V+ LCS+L A G+++ P V K Sbjct: 123 AFYEAMRSEPKL------TDGQPLSERSVEGLHNTLCSILSGAVDEGYLTHNPAWRVYKP 176 Query: 193 Q---RNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 + + R D + + A +E++ + + +K + +G+R GE L W D+D Sbjct: 177 KGVRKERPVADEETVQKMIAALETQSMKYEVYFKLVLATGMRRGEACGLRWSDIDWRHRT 236 Query: 250 VNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 ++V+R + L PKT +G R V + + + LK + + Sbjct: 237 IHVQRTVVKLSGQKIFTKEPKTASGNRRVYISKEMCKLLKAWKQECAWQ-------MEQA 289 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR-RRNPYHTRHTFACW 364 G+T ++ + P ++ R+ +K G+ + + RHT A Sbjct: 290 EGQTLTEEDYLFRQPS------GDPMVPTTFTFRFKKILKENGLPQNLSVHSLRHTNASL 343 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 L+ G + +A +GH +IY D E L Sbjct: 344 LIAQGVDVRTVAGLLGHSQPSTTLDIYAHAFDKTKREAQEKL 385 >UniRef50_A1HTM7 Phage integrase family protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTM7_9FIRM Length = 393 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 73/381 (19%), Positives = 133/381 (34%), Gaps = 41/381 (10%) Query: 34 EITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKI 93 T ++K R + + A T G+ W + Sbjct: 30 ADTGKPVRKVVYARTKAEAKQKRDALA-------AQYEAAYYVDADKITVGDWLAKWLDV 82 Query: 94 K-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSN 152 + +T + + I +S ++ + N L+ Sbjct: 83 YARPAVAPSTYDWYERICRVHLIPAIGHLRLSRLQQMAVQQLLNSLVDA----------- 131 Query: 153 KKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALME 212 G++ RTV ++L LR A + G + T P + V Q + PL+ E++AL+ Sbjct: 132 --GKSARTVQAVHSVLAMALRVARKHGLLRTLPTDDVAVPQVRKQDKRPLTPDEWDALLT 189 Query: 213 SEK--GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKT 267 + + +GLR GEL L W+D+D ++ ++NVRR + I + PKT Sbjct: 190 AAQTAPDIFAALVVEWATGLRRGELLGLMWDDIDFDRCLINVRRAVQIRRGGCVLADPKT 249 Query: 268 NAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQ 327 A R + + + ++ L+ R + + Q VF Sbjct: 250 EATKRVLPVPKEVMQVLRAHRARQMQCRLAAGPAW---------QDCGLVFPTS-----G 295 Query: 328 KPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMV 387 Y + R+ K AG+ +H RH ++ AGA ++GH T +M+ Sbjct: 296 GTLYDPRNWSKRFARIAKAAGLD-IGVHHLRHDLTSRIVAAGAPVKEAQYRLGHATVKML 354 Query: 388 YEIYGMWIDDMNDEQIAMLNA 408 ++Y + D + A Sbjct: 355 LDVYAHRVTGGQDAITETIRA 375 >UniRef50_C9A167 Integrase n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A167_ENTGA Length = 377 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 130/350 (37%), Gaps = 56/350 (16%) Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 ++I T+ ++ ++W + +T + +T+ KT+ K + + PI I+ D Sbjct: 65 KPESEPQMIHTYEQIYNLWYEEYKTTVKASTLLKTERVFKNHILPAFGNKPIQDIKPMDA 124 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 N N +KK V NY L + +A + I+ P + +KK Sbjct: 125 QNQMN-------------IWHKKLVRASMVMNYAGL---IFDYAIRMQLINMNPTKVIKK 168 Query: 192 LQRNR-----IKPDPLSKTEFNALMESEKG----QSQNLWKFAVYSGLRHGELAALAWED 242 R + K E M + + ++ ++ ++G+R GE AL W D Sbjct: 169 PVRKESVREDKDMNFYDKDELKKFMAALENNNNFRAFVYFRLLAFTGMRKGESLALKWSD 228 Query: 243 VDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 +DLEK + + + ++ PKT + IR +++ + L+E K + Sbjct: 229 IDLEKQTLYINKAVSRSATGLYIQTPKTPSSIRRISIDDKTVSILQEYKK----ESPDGL 284 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA--GIRRRNPYHT 357 F + G S + + A+K ++ + + Sbjct: 285 VFQSEDGG----------------------ILSPAKPRKWYLTAMKNLPDDFKQISIHGF 322 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 RHT A L AGA+ + S++GH Q ++Y ++ N Sbjct: 323 RHTHASLLFEAGASIKDVQSRLGHSDIQTTMDVYTHVSKTAKEQLANRFN 372 >UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VEW1_9CLOT Length = 379 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 69/344 (20%), Positives = 139/344 (40%), Gaps = 38/344 (11%) Query: 75 VTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNY 134 + + W +K+ + NT++ + + + E+ ++ ++ Sbjct: 60 LENATDMLVDAWFEYWIDLKKKTVRPNTVRNYSERYERNIKNVIENKLLTEVKPIHCQKI 119 Query: 135 RNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK--L 192 +++ +G T+ L ++L FA ++ I T P + K + Sbjct: 120 FSDMAD-------------EGYKTTTIYQTRIALYNMLEFAKENEVIITNPCKKSVKSDI 166 Query: 193 QRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVN 251 + K + L+ + + + KGQS ++FA+ +GLR GEL L WED++ E+ + Sbjct: 167 GKPSDKKEALTIDDQRRFLAAAKGQSYEYQYRFALQTGLRTGELVGLKWEDINFERKTLT 226 Query: 252 VRRNLTILDMFG-----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 + R++ G PPK+ +G RT+ L A+ LK Q + +R+ Sbjct: 227 IERSMEFRYKVGEWRVGPPKSKSGYRTIPLTDEAICILKAQKE------------KNRKI 274 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 +K+ VF+ R + S+ +AGI+R + + RHTFA + Sbjct: 275 KVIDKEWADTVFLCR-----KGQPVKNSTYDTALFKICDKAGIKRFSMHVLRHTFATRCI 329 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 G P + +GH + +Y ++ ++I ++ L Sbjct: 330 EGGMMPKTLQKILGHSNIGITMNLYVHITEEEKQKEIDLVAEAL 373 >UniRef50_A8FW51 Putative pore-forming cytotoxin integrase n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FW51_SHESH Length = 381 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 80/331 (24%), Positives = 141/331 (42%), Gaps = 22/331 (6%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F + + + + +T S++K L I I SDI ++ ++ Sbjct: 8 FNDYAKQYLAESKFDKAHSTYVSECSKVKNLVS-FFGKKQIRSISQSDIKRWKIKV---- 62 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 + + +T++ + +L ++ A + P GV+ L+ + +P PL Sbjct: 63 ----------HRRFSNKTINEHFTILRAIFSCALSDCVLGRNPMTGVENLKIHTAEPKPL 112 Query: 203 SKTEFNALME--SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 + E L ++ + L V +GLR EL AL W+ +D E + V +L Sbjct: 113 GREELLKLHATPAQCESGKALLFLGVLTGLRISELIALTWDCIDFESREIKVH-TAKVLG 171 Query: 261 MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMP 320 + PKT + IRTV + Q A LK+ Y++TG R I + EK+++ +F+ Sbjct: 172 KYKVPKTTSSIRTVEMNQHAFALLKKHYEVTGSLRPRVIRVLQNDNKTIEKRRVQHLFIN 231 Query: 321 RVCNGKQKPYYSVSSLGARW-NAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 N KP+ + + +A ++ R P RHTFA LTAG + +IA Q+ Sbjct: 232 SQSN---KPFIDSKQYSKTFFTPFLVKASVQHRGPNQLRHTFASQCLTAGISKEWIARQL 288 Query: 380 GHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 GH + MV + Y W+ + A + + Sbjct: 289 GHNSTNMVDKHYARWLQSDAPDNAAKYSDAM 319 >UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERR7_OCEIH Length = 378 Score = 221 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 120/342 (35%), Gaps = 35/342 (10%) Query: 77 TRVIKTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIII--CESTPISHIRYSDILN 133 ++F W + T +K I IS I +I Sbjct: 61 EPSKESFQSFLQHWFYTHYITSIKRTTHSNRDYLIKKHLIEDNPFAEKAISDITTEEIDY 120 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 + + L KG + + +L A + IS P + Sbjct: 121 FYHYKL-------------GKGYSTSYIRKMHQMLHLSFAQAVKWRKISYNPVVNTTPPR 167 Query: 194 RNRIKPDPLSKTEFNALMESEK-GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 + SK + +E+ + L+ A+Y+G+R GEL L W D+++EK +++ Sbjct: 168 VQTKQVSIWSKDQVKQFLETSNLERLYILFLLAIYTGMRKGELLGLKWSDINMEKECIHI 227 Query: 253 RRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 RNL + F PKT R + + + L+ + ++ Y Sbjct: 228 HRNLCYIQNQGYFFTTPKTVRSTRVIPISSLISDQLQCIKEKQQCEKELAGPSY------ 281 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTA 368 + V +C K ++ + +K A + + + RHT A L++ Sbjct: 282 ---EDNDLV----ICTALGK-VQDPRNVTRVFERCIKNANVPKIRFHDLRHTHASILISE 333 Query: 369 GANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 G + ++S+MGH + + +IY + + ++E + L Sbjct: 334 GVDIVKVSSRMGHTSPKTTLDIYAHVVPNTDNEVATIFEKSL 375 >UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W9U7_9FIRM Length = 370 Score = 221 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 117/355 (32%), Gaps = 47/355 (13%) Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 + + V + T EL W + E + T + K + + + I Sbjct: 49 AKLKKQGVKSICNITLNELLKDWLPLYEPTVKYTTYTRVYGVFKNHILPYLGNKKLDKIT 108 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 I N KK + + L L +FA G+ P Sbjct: 109 TPVIQKLIN----------------KKSQEIADFKLINIYLNRLFKFAINQGYTDYNPCL 152 Query: 188 GVKKLQRNRIKPD----PLSKTEFNALMESEKGQ----SQNLWKFAVYSGLRHGELAALA 239 + + + D K E + K +K A Y+GLR GE+ AL Sbjct: 153 NIIYPTIRKEQKDMSLEYWDKEELKEFLYHAKKDLDQMWYLFFKIATYAGLRKGEILALT 212 Query: 240 WEDVDLEKGIVNVRRNLTIL----DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 W D+D + + V ++L++ PKT + IRT+++ + ++ L + Sbjct: 213 WNDIDFKNKTLTVNKSLSVTRQSKKAITSPKTKSSIRTISIDKTTIKELYNWKIEQSKLK 272 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 I Y + KQ +++S R+ +K+ +R+ + Sbjct: 273 LQNINQY-------------------IFTTKQSELINLNSPRKRFERVIKKHDLRKIRLH 313 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHT A AG + ++GH T++ IY ++ + Sbjct: 314 SLRHTHASLCFEAGMTIKDVQHRLGHSTSKTTMNIYIHVTKSQEEKNGQKFEKFM 368 >UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35B62 Length = 406 Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 68/369 (18%), Positives = 124/369 (33%), Gaps = 33/369 (8%) Query: 60 EYLRRFPQSST---------GAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQL 110 Y P++ ++ T T + W + +L NT + + + Sbjct: 36 RYFETLPEAKNWLADARYEERHNLIVTSPDMTVDKWFTYWIENIVCDLAPNTKRNYQERY 95 Query: 111 KTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCS 170 K + + I+ ++ N + + T+ + + Sbjct: 96 KWNIQPVIGAMCIADVKPMHCKAVLNRM--------------ETTYAGSTIRQAYITMGT 141 Query: 171 LLRFAYQSGFISTKPFEGVKKLQRNRI--KPDPLSKTEFNALMESE-KGQSQNLWKFAVY 227 +L+ A + I+ P GV+ + R L+ E +E+ + + + + Sbjct: 142 MLKSAVMNDIIAKHPMNGVRYTKPVRAVDDIKYLTVEEQEKFLEAAARSHNYRQYALLLE 201 Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALE 282 +GLR E+ L W+ +D + + V ++L GPPKT RT+ L A Sbjct: 202 TGLRTAEMIGLTWDAIDWKNRTLTVNKSLEYRHSQGYWRAGPPKTQKSYRTIPLTDKAYS 261 Query: 283 ALKEQYKLTGHHRKSEITFYHREY--GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW 340 LK Y + SE EY RT + K + N + SS Sbjct: 262 ILKSCYDEKDSRKSSETLSQVLEYIDSRTGENKCLIMRDLVFVNWRTGEPAKNSSYDTHL 321 Query: 341 NAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND 400 AGI+R + RHT+A + G P + +GH + + + Y D+ Sbjct: 322 YKLCDEAGIKRFCMHALRHTYATRAIERGVQPKVLQQLLGHASIKTTMDRYVHVTDESLV 381 Query: 401 EQIAMLNAR 409 I Sbjct: 382 NAIRQFQQA 390 >UniRef50_C2BD46 Possible phage integrase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BD46_9FIRM Length = 377 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 128/358 (35%), Gaps = 44/358 (12%) Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 ++ + + + TF E+ + W ++ + ++ ++TKS T + + I Sbjct: 49 ANLRNENLRRKKNPTFKEIGERWLELYSKTVKYSSYQRTKSLFNTHIYPFIGNKLLKSIT 108 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 + + +NKK + + + A + + +A + P Sbjct: 109 TAMLQEL----------------TNKKSKELASFSKINAQIKRVFDYAISRDIVDYNPAL 152 Query: 188 GVKKL-----QRNRIK-PDPLSKTEFNALMESEKGQSQNLW----KFAVYSGLRHGELAA 237 V +R + + K E + + K +W Y+G+R EL A Sbjct: 153 SVIYPITNVNSVDRYESIEFWEKDELKEFLTACKKDLDFMWFCYFWILSYTGMRKSELQA 212 Query: 238 LAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 L W D+D + +N+ ++L++ KT R +T+ ++ L + Sbjct: 213 LEWADIDFNRRTININKSLSVYKDNKKFISSTKTKNSTRIITIDSITVKLLLD-----WK 267 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 ++SEI G+T+K V K S ++ R+ +K +R+ Sbjct: 268 QQQSEIYKKTVIKGKTQK---------YVFTDKSLELTSHNAPRKRFLRVLKNNNLRKIR 318 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + RHT A AG + + ++GH + IY + I+ +S Sbjct: 319 LHSLRHTHASLCFEAGMDIKDVQHRLGHSNIETTLNIYVHISKIKERKSISKFEDFMS 376 >UniRef50_D0L542 Integrase family protein n=3 Tax=Bacteria RepID=D0L542_GORB4 Length = 463 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 78/400 (19%), Positives = 142/400 (35%), Gaps = 59/400 (14%) Query: 24 KRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTF 83 KR +E +G+ ++A + + E+ +G +V T Sbjct: 26 KRRQERKRGF----RTKREAVDALDERLSEVRTG----------------IVAVDQRLTL 65 Query: 84 GELCDIWTKIKE-TELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 + W KE + T++ + + + + + + +R + + + +E+ Sbjct: 66 AQYLASWLTAKEQAGIRATTLRSYRQHVDSYIVPTIGNVRLRDLRATHVEHMLSEIAKPP 125 Query: 143 TLYLDN------PRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 R N K + T A L S L A + +S ++ + +R Sbjct: 126 KKPAKGVAIGKGKRRNPKALSPATQRRVHATLRSALTSAKRKHLVSFNAAADMELPRASR 185 Query: 197 IKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 K P ++ A ++ K + ++ +GLR GE + W DVD EK V V + Sbjct: 186 PKVKPWEASDLGAFLDHATKDRLGAFFETIAMTGLRRGEALGIRWPDVDFEKARVTVNQQ 245 Query: 256 LTILD----------------MFGPPKTNAGI-RTVTLLQPALEALKEQYKLTGHHRKSE 298 L +D FGP KT +G R V L L L Q R+ Sbjct: 246 LVEVDGTGIDCPFCGGEHKQFRFGPCKTASGEARIVDLDSGTLGVLMAQRLRQEQEREQW 305 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 Y VF + + + A+++A AG+RR + R Sbjct: 306 GDAY---------NDHQLVFA-----REDGSPIPPADVTAKFHALTDEAGLRRIRLHDLR 351 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 H A +L AG A ++ ++GH + + + Y +D + Sbjct: 352 HGQASLMLAAGVPIAVVSKRLGHSSISITSDTYSHLLDGV 391 >UniRef50_A2RHC7 Phage integrase n=3 Tax=root RepID=A2RHC7_LACLM Length = 394 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 66/339 (19%), Positives = 122/339 (35%), Gaps = 30/339 (8%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F ++ +W + + T++ +++L + I + + N+ + Sbjct: 69 FKDIAMLWFDSYKLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQIVNQWMINA 128 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN----RIK 198 + L+ KG+ + Y ++ + + A G + P V + K Sbjct: 129 SQPLNGAYHRPKGKG-KDFKIYFNIVERIFKHALSLGLVKDNPCVNVIVPKVRLESTEKK 187 Query: 199 PDPLSKTEFNALMESE----KGQSQN-----LWKFAVYSGLRHGELAALAWEDVDLEKGI 249 L+ + E K + N L + V SGLR GE AL+W D+D + G Sbjct: 188 VKYLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSDIDFKTGS 247 Query: 250 VNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 V+V + + PKT+ R V + A+E LK F + + Sbjct: 248 VSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWE-----------LFQAKYFMSI 296 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 K K VF R G Y ++ +W A + + + + RH+ A LL A Sbjct: 297 GKGKQELVFPNRT--GGVLDYQTMRPFLIKWLRACQ---LPQVGFHGFRHSHASLLLNAD 351 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 I ++GH + +M + Y D + + + Sbjct: 352 VPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFES 390 >UniRef50_A6FXR9 Phage integrase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXR9_9DELT Length = 421 Score = 220 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 77/391 (19%), Positives = 138/391 (35%), Gaps = 36/391 (9%) Query: 22 RGKRCRETLKGWEITNSNIKKAGNLRA-LIVHEINSGEFEYLRRFPQSSTGAKMVTTRVI 80 R KR R +++ K+A E+ +G F+ + +G + + + Sbjct: 12 RTKRVR------KVSPVQTKRAAQAFERETRAELMAGLFDEENNHGPNGSGRRKAKPQAV 65 Query: 81 KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 T E + + T + +S LK + + + I I Y+ L Sbjct: 66 PTLAEFAPEFMAYQATLNKATELASKRSSLKNHLLPVFGDLRLDQIDARAIDRYKMRKLS 125 Query: 141 GE--TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIK 198 E R +G +T++N++ +L LR A + G + P ++ L+ + Sbjct: 126 PEHAATVASTRRRAGEGLKPKTINNHLMVLSRALRVAQKWGVLDRVP--EIELLRVTKQP 183 Query: 199 PDPLSKTEFNALMESEKGQS---QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 D L E + + + A +GLR GEL AL W+ V L + V + Sbjct: 184 FDFLDFEEAERYLAAAREHYPDWHVFVLVAARTGLRVGELLALQWKHVRLAGRTLRVELS 243 Query: 256 LTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLH 315 T PK+ R V L AL+ ++ G + + Sbjct: 244 YTRAGGVSSPKSGKA-REVPLTWDVARALEVHREV---------------LGAKARARDA 287 Query: 316 FVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFI 375 VF S+ S+G + K A +R +P+ RHTFA + G + Sbjct: 288 LVFPNADGERG-----SLRSVGHFVSRIAKAAKLRHVHPHMLRHTFASHAVMRGVPMRVV 342 Query: 376 ASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 +GH + +M Y + + + I + Sbjct: 343 QEWLGHASIEMTMR-YAHLAEGIGLDLIDRI 372 >UniRef50_C2NSI2 DNA integration/recombination/invertion protein n=2 Tax=Bacillus cereus group RepID=C2NSI2_BACCE Length = 382 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 65/348 (18%), Positives = 121/348 (34%), Gaps = 33/348 (9%) Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 ++ + + T+ D W K + L T + K+ + + + I Sbjct: 56 KAKMLSGERSDLSKLTYAAYVDEWMKERTFHLQETTYEIHKTYIANVIKPRLGHFQMREI 115 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 + + NEL G + TV ++ + L+ A I P Sbjct: 116 EPIHMQKFVNELAIDI------------GYSPATVHLIYRIVSASLKKAKVLKLIDENPT 163 Query: 187 EGVKKLQ-RNRIKPDPLSKTEFNALMESEKGQSQNL-----WKFAVYSGLRHGELAALAW 240 G+ + R + + + E N + K ++ A+ +G+R GE+ L W Sbjct: 164 IGITLPKLRKTSEINVWTLEEVNHFINEGKNVYRSTRMYICCVIALLTGMRQGEIMGLRW 223 Query: 241 EDVDLEKGIVNVRRNLTILDMFG-PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 +D+D E I+ +R+ LT K NA IR V + L+ + R Sbjct: 224 KDIDFENRIIYIRQTLTQSGKIKVGAKNNASIRNVHFPIKLIGELELHRETVKKERL--- 280 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 Y + + + V +C K P + + ++ G+ + + RH Sbjct: 281 ------YHGKDYEDNNLV----ICARKGNPLI-PKNGRIEFYNLTEKLGLPKIRFHDLRH 329 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 T A L+ N I+ ++GH Q Y + +M E L+ Sbjct: 330 THATMLIQQNVNVKLISERLGHTDIQTTLNTYSHVLPNMQREVADKLD 377 >UniRef50_A4XLL4 Phage integrase family protein n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XLL4_CALS8 Length = 360 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 70/334 (20%), Positives = 123/334 (36%), Gaps = 38/334 (11%) Query: 83 FGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 E D W + + + T K K LK S + + ++ + N+L Sbjct: 58 LNEFLDRWLEEYAKNYVAPKTYIKYKDSLK-HVRKAFPSHTLQQLNTFELQKFFNQLSQT 116 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR-NRIKPD 200 + +V ++L + L+ A + + P E VK Q+ K Sbjct: 117 --------------LSQASVRKIYSVLNNALKTAIKWNMLKENPLEFVKLPQKYEEKKIK 162 Query: 201 PLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 +E K + A+++GLR GE+ L W++VD EK +++++ L + Sbjct: 163 VWDIETVKKFLEDIKDEKIHTAVTLALHAGLRAGEICGLTWDNVDFEKKCIHIKQALQKI 222 Query: 260 D---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 + PPK+ IRT+ + E L E+YK R++ K+ +F Sbjct: 223 GKEIIIKPPKSKTSIRTIYMTSYLYETLLEEYKRQEPLREAY------------KKLGNF 270 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 V + N + + V G + RHTFA LL A NP A Sbjct: 271 VCIHETGN-----PFCPDYFTHTFKKLVSCLGYPEIRFHDLRHTFATILLQAQTNPKIAA 325 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 +GH ++ +Y +D+ + + L Sbjct: 326 EILGHSNTKLFLNLYAHVLDEQKIKATHKIEEIL 359 >UniRef50_Q03GP3 Integrase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GP3_PEDPA Length = 384 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 74/416 (17%), Positives = 149/416 (35%), Gaps = 70/416 (16%) Query: 13 RYIRIWFM-FRGKRCRETLKGWEITN-----SNIKKAGNLRALIVHEI-NSGEFEYLRRF 65 IR F + G ++L G + T K+A + + + EI G E RRF Sbjct: 12 GKIRYEFQVYAGV---DSLTGRQKTTRRRGFKTRKEASIVLSRLELEIEKRGLQEDERRF 68 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISH 125 F ++C W + + +T++KT+ + + I++ Sbjct: 69 -----------------FRDVCAEWMEQYRLTVRESTLEKTQRIINIHVLPAFGDMVINN 111 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 I + N+ ++ ++ + +A ++ ++ P Sbjct: 112 ITPNVCQKVVNKWF----------------LEAKSYKKWLNYASMIFDYALRAEYVGRNP 155 Query: 186 FEGVKKLQRNR----IKPDPLSKTEFNALMESEKGQSQ----NLWKFAVYSGLRHGELAA 237 V + + ++ E N + + +++ YSG+R GEL A Sbjct: 156 CTLVTMPRVQEQAGEKLENFWTRDELNTFFDYVTPERDVEQFTMFRVLAYSGIRKGELLA 215 Query: 238 LAWEDVDLEKGIVNVRRNLTI----LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 L W+D++ E + V + LT + PPK+ AG RT+ L + L++ G Sbjct: 216 LTWKDINFEDNTLRVNKTLTQGLGGKLIVQPPKSRAGRRTIDLDDSTMRYLRQ---WKGV 272 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 R++ + G VF + + S+++ N A+K G++ + Sbjct: 273 QRETFLGM-----GFNTNNVDQLVFASN-----RNHFRSMNTPTKWLNKAIKATGLKHIS 322 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHE--TAQMVYEIYGMWIDDMNDEQIAMLN 407 + RHT A L +G ++GH + + ++Y + N + Sbjct: 323 IHGFRHTHASLLYQSGVGLKETQQRLGHSRADSSVTLDVYTHTTEQQNVAALQRFE 378 >UniRef50_C0EE56 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE56_9CLOT Length = 348 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 118/337 (35%), Gaps = 28/337 (8%) Query: 83 FGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 F W K E +L T+ + + L+ + I + + + L Sbjct: 18 FEVFAKQWFKEYAEVKLRERTIARYRQ-LEARTYAALGHLHMDKITVRHVQKFIHNLGEE 76 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 R +T+ +Y++ + ++ +A + + P E V+ + + + D Sbjct: 77 GINQTTGGR-----LAPKTIHHYLSFVSTIFSYAIKMQMVKNNPCEHVQLPKAEQKELDC 131 Query: 202 LSKTE---FNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 + E F L++ E + Q + A+Y G R GEL L W+D+D G++++RR+ Sbjct: 132 YTLEEAQEFLNLLQKEPLKYQAFFTLAIYGGFRKGELLGLEWKDIDFSTGVISIRRSSLY 191 Query: 259 LDMFGP----PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL 314 G KT + R++ + L+ LK R + Sbjct: 192 TKGKGTFTDTTKTKSSQRSLKIADEVLQVLKRYQSQQIFDRARVGDQW------------ 239 Query: 315 HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF 374 V R+ +S +R G R + RH A L+ + Sbjct: 240 --VDTDRLFTKWNGEPMHPNSPYTWLKRFCERTGQRFLGVHQFRHLNATLLINNRVDAKT 297 Query: 375 IASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 I++ +GH IY + + +++ LS Sbjct: 298 ISASLGHTQVSTPLNIYAHTFQESQAKASEVISNALS 334 >UniRef50_Q03L48 Integrase n=30 Tax=Streptococcus RepID=Q03L48_STRTD Length = 388 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 73/384 (19%), Positives = 136/384 (35%), Gaps = 46/384 (11%) Query: 41 KKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTT 100 K + + + +F++ + G+ I+T+ EL W + + Sbjct: 34 KVTARTKKELKTKAQQAQFDFK------ANGSTRYKEVAIETYEELAISWWDSYKNTVKA 87 Query: 101 NTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRT 160 NT + K L + + + + I + N+L + + Sbjct: 88 NTKRAQKGLLNNHVLPLFGEFKLDKLTTPLIQSMMNKLANSTNTGEAGAYLH-------- 139 Query: 161 VDNYIALLCSLLRFAYQSGFISTKPFEGVKKL----QRNRIKPDPLSKTEFNALM----- 211 D AL +L++ I T P V + + K + E + Sbjct: 140 YDKIHALNKRILQYGVVLQVIPTNPANNVVLPRNTQKDKKAKVKHFNNDELKQFLTYLDS 199 Query: 212 ----ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKT 267 + + L+KF + +G R E AL+W D+DL+ +V++ + L PK+ Sbjct: 200 LDNSKYKNYYDITLYKFLLATGCRINEALALSWSDIDLDNSVVHITKTLNYEMKLNSPKS 259 Query: 268 NAGIRTVTLLQPALEALKE-QYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGK 326 +G R + + + + +K Q+K T K GRTE V + Sbjct: 260 KSGYRDIDIDKQTVTMMKRYQHKQTQEAWK---------LGRTE---------TVVFSDF 301 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQM 386 Y + +L +R KRAG+ + RHT A LL +G + ++GH M Sbjct: 302 IHEYPNSRTLQSRLGTHFKRAGVTNIGFHGFRHTHASLLLNSGIPYKELQHRLGHSKLSM 361 Query: 387 VYEIYGMWIDDMNDEQIAMLNARL 410 +IY + + ++ L Sbjct: 362 TMDIYSHLSKENAKKAVSFYEVAL 385 >UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NXL1_9BACE Length = 397 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 121/342 (35%), Gaps = 24/342 (7%) Query: 78 RVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNE 137 T E W + +L NT++ + + + IS ++ + Sbjct: 63 PTETTVDEWFGFWIENIVGDLAPNTLRNYRERYAHNIQPVIGRMAISSVKPMHCKKVLLQ 122 Query: 138 LLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI 197 + T+ + ++ + A + I+ P +GV+ + R Sbjct: 123 MDAI--------------YAGSTIRQAYITMGTMFKAAKMNDVIAKHPMDGVRYTKPVRA 168 Query: 198 --KPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 L++ E + +++ K + + + +GLR GEL L W+ VDLEK + V + Sbjct: 169 VDDIKFLTRQEQSLFLQAAKKSHNYYQYALILETGLRTGELIGLTWDAVDLEKRTLTVNK 228 Query: 255 NLTILDMF-----GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 L GPPKT RT+ L A E L+ + ++S + EY Sbjct: 229 TLEFRHGLHTWRAGPPKTQHSYRTIPLTDRACEILQSVWNSRDTRKESPLLSQTLEYIDR 288 Query: 310 EKQKLHFVFMPR--VCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLT 367 + + M N + SS AGI+R + RHT+A + Sbjct: 289 RTGSIAKLVMRDLVFINWRTGEPAKNSSYDTHLYKICDEAGIKRFCMHALRHTYATRAIE 348 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 +G P + +GH + + + Y D D+ + Sbjct: 349 SGIQPKVLQKLLGHASIKTTMDWYVHVTTDSLDQAVRQFEKN 390 >UniRef50_C8NHZ6 Phage integrase family site-specific recombinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHZ6_9LACT Length = 393 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 111/338 (32%), Gaps = 48/338 (14%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T+ EL + W + + +T + T + K + I I D N Sbjct: 74 TYRELYNEWLVTYQKRVRPSTFQATVTYFKKHILPAFGDYYIDTITIQDCQAQVNRWYSN 133 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD- 200 ++ +Y + ++A + I P V + K D Sbjct: 134 Y---------------PKSTQSYKIYAQMIFKYAQKLNLIEKNPMSLVDLPKSGDFKDDK 178 Query: 201 --PLSKTEFNALMESEKG--QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL 256 + +E + + + Y+GLR GE AL W D+D ++V + + Sbjct: 179 LKYYDRETLIRFLEYIEPFKEVYTFFYLLSYTGLRCGEAFALTWNDIDFRNHSISVNKTV 238 Query: 257 TIL---DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK 313 KT G+RT+ + + E +L+G+ Sbjct: 239 ARSMEDKYISQTKTKNGMRTIRINGSLERLISEWKELSGNE------------------- 279 Query: 314 LHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPA 373 +VF R +YS ++ N ++ R P+ RHT A L AGA+ Sbjct: 280 -TYVFQNR-----NNSFYSSNTAVYWLNQILEGTNFPRITPHGFRHTHASLLAEAGADLK 333 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 I ++GH Q IY ++ D + +S Sbjct: 334 DIQDRLGHGDIQTTANIYTHVTNNKKDNTNDKFDKLMS 371 >UniRef50_C6LG06 Prophage LambdaBa02, site-specific recombinase, phage integrase family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LG06_9FIRM Length = 429 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 84/436 (19%), Positives = 142/436 (32%), Gaps = 70/436 (16%) Query: 27 RETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTF--- 83 R+ K WE K AG + I G F ++ A + ++F Sbjct: 7 RKRGKTWEYGFEGAKIAGK-----RNRITKGGFRTKAEALEAGNKALVQYNSAGQSFSPS 61 Query: 84 ----GELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNEL 138 + D W + L NT + ++ + I + I Y N L Sbjct: 62 EISVADYLDYWMDNYCKMNLKYNTQLGYLNIIENHLKPKFGQYRLCAISAAPIQEYVNHL 121 Query: 139 LHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ-SGFISTKPFEGVKKLQRNRI 197 +G TV I+ L +A + ++ P ++ + Sbjct: 122 KT-------------QGYAKSTVSGIISTLSGAFNYAVEPMHYLQYNPCNNIRYPKFRDT 168 Query: 198 KPD---PLSKTEFNALMESEKGQSQNLWKFAV--YSGLRHGELAALAWEDVDLEKGIVNV 252 K + +S +F ++ +SQ + Y+GLR E AL W+D+DL+ ++V Sbjct: 169 KTEARYIISPEDFQRIIARFDSRSQYYLPLMIGYYTGLRISEAFALTWDDIDLDNRTLSV 228 Query: 253 RRNLTILDM---------------------FGPPKTNAGIRTVTLLQPALEALKEQYKLT 291 + + FG PKT RT+ ALK K Sbjct: 229 NKITLKRNYGVDVRTVLQNKGKKEEKSAWYFGTPKTAGSERTIKFGDALYHALKYAKKTQ 288 Query: 292 GHHRKSEITFYHREYGRTEK-QKLHFVFM---------------PRVCNGKQKPYYSVSS 335 +R +Y Y + EK +K +F +C + Y S S Sbjct: 289 LENRLHYGEYYTDIYLKPEKDEKGDEIFRLIETERSIPCALNRANMICVRENGQYVSTDS 348 Query: 336 LGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWI 395 I N + RHT A L+ GA+ + ++GH+ Q + Y Sbjct: 349 FKYCARVIHYDLKIA-FNYHSLRHTHATTLIENGADIKDVQERLGHDNIQTTMQTYVHNT 407 Query: 396 DDMNDEQIAMLNARLS 411 D M+ + + +S Sbjct: 408 DTMSSRSVDIFEQAVS 423 >UniRef50_D1A578 Integrase family protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A578_THECD Length = 409 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 117/352 (33%), Gaps = 37/352 (10%) Query: 77 TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 R T + D W + E+ T+ + ++ + +R + I Sbjct: 75 DRTTITVAQYLDEWLEAHAVEIKPRTLAGYHTMVRLYIKPHIGDLRLQAVRPAQITKLYR 134 Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ-SGFISTKPFEGVKKLQRN 195 +LL + K +V TV A+L A I + P E K+ + Sbjct: 135 DLLA-------SGGEGGKPLSVSTVMRVHAILHKAFADAVLVDELIPSNPAERAKRPKGL 187 Query: 196 RIKPD-PLSKTEFNALMESEKGQSQ-NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 + D + + +++ + + A Y+G R GEL AL W +VDL+ + + Sbjct: 188 VREADGIWTPAQLRVFLQAVREHRLFAFYHLAAYTGARRGELLALRWSNVDLDGKRITIG 247 Query: 254 RNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 + ++ + G K+ R VT+ + L+E K + + Sbjct: 248 GSAGVVKGRRIEGTTKSGRS-RVVTIDDETVAVLREHRKAQLAEQFQAGEAW-------R 299 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG-----------IRRRNPYHTRH 359 + +VF ++ S+G ++ + + RH Sbjct: 300 GAEDGYVFTT-----ERGEPIHPDSVGWLMTKTIRAYNNPPQGPKPAEPLPHARVHDLRH 354 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 A LL AG +A+++GH + +Y I + +S Sbjct: 355 IHATTLLLAGVPVHVVAARLGHADPAITLRVYAHVIRSAEVAAADVFAKVMS 406 >UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridia RepID=XERCL_THETN Length = 391 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 127/347 (36%), Gaps = 43/347 (12%) Query: 82 TFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 T G+L W ++ T K + + I+ S++ + ++ Sbjct: 65 TLGDLMHTWLFEVVRMSRKPATFVKYEGHYRNY------------IKNSELYGMKISIIK 112 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK------KLQR 194 + + ++G++ +T+ L + +A G+++ P G K ++ Sbjct: 113 SIQIQRYYNKLYQQGKSSKTIKALNNFLKTFFNYAVDEGYLAKNPCTGKKIVIPGTPEEK 172 Query: 195 NRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 + + S E + E+ KG + L+ A +GLR GEL L W D+D EK + V+ Sbjct: 173 IETEIETFSDEEIKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKELRVQ 232 Query: 254 R------------NLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 R N + PKT IRTV + + LKE + + Sbjct: 233 RMIKQVTIIDEKGNRKYKTIEQIPKTKNSIRTVPIPSSLIPMLKEHRNRQREEKLKAGSV 292 Query: 302 YHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTF 361 Y + + +VF + N S+L + + RAG+ R + RHT+ Sbjct: 293 YLNDVEK------GYVFTTELGNT-----IDASNLLKTYKKILNRAGVPYRKFHAIRHTY 341 Query: 362 ACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 A L G ++ +GH + IY I + LN Sbjct: 342 ATKLFERGVPLKTVSELLGHSNISITANIYTHVIPKQKTNAVETLND 388 >UniRef50_Q8ETV2 Integrase n=3 Tax=Bacilli RepID=Q8ETV2_OCEIH Length = 392 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 118/345 (34%), Gaps = 36/345 (10%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 TF E+ + W K E+ T+ +S+ + + + I S N Sbjct: 68 TFQEVFEEWFKQHRREVKPTTVYAMESKFNRRILPVFGPYKMKDITRSHCQKAINGWAKE 127 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN------ 195 ++T +Y + R+A + I P + V + Sbjct: 128 ----------------LKTFKDYKIQANQVFRYAMKMDMIKRNPMDYVTLPKLKHEMEYV 171 Query: 196 ---RIKPDPLSKTEFNALMESE--KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 K ++ E +E+ + + + ++G R GEL AL W DVD + + Sbjct: 172 AELEEKKHYYTREELRTFLEAIQKDDMAYTMLRLLSFTGARKGELYALHWSDVDFHQKSI 231 Query: 251 NVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG 307 ++++ L KT A R V++ L LK+ ++ + Sbjct: 232 SLKKTLIYTGGEKQLQTSKTKASRRIVSVDDETLAILKKWR-----SKQIQRYLTLELAA 286 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAV-KRAGIRRRNPYHTRHTFACWLL 366 + +F + Y ++ L + K + + + RHT A L Sbjct: 287 PFQSDDKQPIFTVYNQLKHEMDYCRLAYLNDKLERIYQKNPELPQIKVHEFRHTHASLLF 346 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 AGA+ + S++GH Q +IY D+ ++ M ++ Sbjct: 347 AAGASIKDVQSRLGHTDIQTTMDIYTHVTDEAKEKTAEMFQKYMT 391 >UniRef50_A6TLJ2 Phage integrase family protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLJ2_ALKMQ Length = 382 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 66/338 (19%), Positives = 121/338 (35%), Gaps = 40/338 (11%) Query: 77 TRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 +F + + + + E L N+ + + +K + I I + N+ Sbjct: 58 EPTTISFSDYLNYFIENYIEIHLRENSQRARQHIIKNHIRPAFGNYKIMQITSQALQNFI 117 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 + K + + A L + + A + FI P VK +R+ Sbjct: 118 TK--------------KSKAYSKNYISMIHATLSTAFKMAVEWEFIRINPMTRVKVPKRD 163 Query: 196 R----IKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIV 250 + LS E N E +G + + A ++GLR GE++AL W D+D + ++ Sbjct: 164 DQEMDKEIKTLSPEEVNRCAERLQGTHHYIPFMIAFHTGLRAGEVSALQWSDIDFDNQML 223 Query: 251 NVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 +V + L F PPKT + RT+ + + LK ++ Sbjct: 224 SVTKRLDYSASKENWEFKPPKTRSSNRTIAIGNELITILKSHSINQKKNKL--------- 274 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWL 365 K H+ +C + ++G ++ I N + RHT A L Sbjct: 275 -----KYGKHYTENDFICTFENGEVVITKAIGRVSEIIIRDVKID-FNFHMLRHTHATML 328 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 L AG NP + ++GH T + + Y + + Sbjct: 329 LEAGINPKVVQERLGHSTVSITLDTYSHITIEFQKTAV 366 >UniRef50_Q82ZU2 Site-specific recombinase, phage integrase family n=2 Tax=Enterococcus faecalis RepID=Q82ZU2_ENTFA Length = 381 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 57/379 (15%), Positives = 128/379 (33%), Gaps = 53/379 (13%) Query: 38 SNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE 97 K+A A I+ +I + + TF +L + W + Sbjct: 40 KTKKQAQIALAEILKDIEENGLD---------------NKPSVLTFKQLYEKWLAQQRLT 84 Query: 98 LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRT 157 + +++ K + + + I + N+ + Sbjct: 85 IKPSSIAVNKRFAEKHILPYLGDCKLDEITVIQCQDLVNKWFNQGHKQYSF--------- 135 Query: 158 VRTVDNYIALLCSLLRFAYQSGFISTKPFEG--VKKLQRNRIKPDPLSKTEFNALMESEK 215 Y L ++R+ ++T P + K + K + +K E N + K Sbjct: 136 ------YRKLTAQIMRYGESMELMNTNPMRKTILPKWKEEETKLEYYTKQELNHFFDCLK 189 Query: 216 G----QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMF----GPPKT 267 + ++ ++G R E+ AL W+D+D+ V + + + + + PKT Sbjct: 190 QYGNFKQLAFFRLLAFTGCRKSEVLALQWKDLDITNKSVYIGKTVAQDEFYNILTQTPKT 249 Query: 268 NAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQ 327 + R+++L L+ + + + + + G + ++F Sbjct: 250 ASSTRSISLDNETLQIMAKWRTIQRSD--------YFQMGFNTSSEEQYIFTNN-----H 296 Query: 328 KPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMV 387 S + + N +K+ + P+H RHT A LL +G +A ++GH + + Sbjct: 297 NKLLSPNVVNIWLNCLIKKYDLPSITPHHFRHTHASLLLQSGVPIKEVAERLGHTSTAIT 356 Query: 388 YEIYGMWIDDMNDEQIAML 406 IY + + ++ Sbjct: 357 DRIYSHVMPEEKEKTADKF 375 >UniRef50_B0UFZ7 Integrase family protein n=3 Tax=Methylobacterium RepID=B0UFZ7_METS4 Length = 380 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 83/373 (22%), Positives = 143/373 (38%), Gaps = 39/373 (10%) Query: 38 SNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE-T 96 + K+A E+ G P S T G+ D W K E Sbjct: 33 ATRKEADAFLTRARSEVAHGV-----HIPDSQ----------SMTVGQAADAWLKHAEEG 77 Query: 97 ELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGR 156 L +T+ + + + S ++ + + ++ EL KGR Sbjct: 78 GLEWSTVLHYQQHVNEHIRPLIGSLRLTQVTTPRVYSFAEEL-------------RAKGR 124 Query: 157 TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK--KLQRNRIKPDPLSKTEFNALMESE 214 + V + L + RFA G P VK + +R++ + + ++ E A++ + Sbjct: 125 SPEMVRRAVQSLGRIFRFAKGRGLAGQNPVADVKLKRSKRDQARVEIPTREELRAILGAA 184 Query: 215 KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTV 274 +G+ + L A+++ LR EL L W DVDL++ ++ VR+ GPPK+ AG R V Sbjct: 185 QGRWRPLIVTAMFTALRASELRGLRWSDVDLKRRVLTVRQRADAWKRIGPPKSEAGTRDV 244 Query: 275 TLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVS 334 L + L+E + ++ F + + H + R Q V Sbjct: 245 PLAPMVVNTLREWRLACPKG-ELDLVFPSGAG----QVEHHPNIIARGWEPTQIAAGVVE 299 Query: 335 SLGARWNAA--VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 + + A K A R N + RH A + +G P + + MGH + + Y+ YG Sbjct: 300 MVDGKDKAGNPAKAAKGRY-NFHALRHAAASMFIESGMTPKRVQAIMGHSSIIVTYDTYG 358 Query: 393 MWIDDMNDEQIAM 405 D +Q AM Sbjct: 359 HLFSDDEADQNAM 371 >UniRef50_A5N1D5 Phage integrase-related protein n=2 Tax=Clostridium kluyveri RepID=A5N1D5_CLOK5 Length = 392 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 67/351 (19%), Positives = 133/351 (37%), Gaps = 28/351 (7%) Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 +SS G +++ E W K + + L+ +T K+ ++ PIS + Sbjct: 55 KSSNGYNFSGDKIL--LKEYLKRWLKTEGSSLSPSTQKRY-NEFCVHISNHLGEIPISKL 111 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 I + L + KKG + T+ +L L A + G I Sbjct: 112 TGLQIKEFYKNLEQPQVYSNF-----KKGLSRSTILKVHRMLHKALTDAVRDGTIDRTVI 166 Query: 187 EGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDL 245 +K + + + F + ++ K + L A +GLR E+ L WED+D+ Sbjct: 167 SNIKYGSVEKTETKVWDNSTFYSFLDKIKEELIYLPVLLAFETGLRQSEITGLKWEDIDI 226 Query: 246 EKGIVNVRRNLTILDMFG-----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 K ++ V+RN + KT + +R + L +E LK+Q + ++ Sbjct: 227 NKKLLTVKRNYGYDALKKSLSDKKTKTKSSLRVINLFDNTIENLKKQKQQQRLNKLL--- 283 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 YG+ ++ +C + + R+ VK+ ++ + RH+ Sbjct: 284 -----YGKA------YIESGYICTTSNGNPINPLYISKRFAQLVKKHNFKKIRFHDLRHS 332 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 A LL +P ++ ++GH + + + Y D+ + N ++S Sbjct: 333 HATMLLKENVHPKIVSQRLGHSSIAITLDTYTHVSTDIEKNALLSANEKIS 383 >UniRef50_C2EIM6 Phage integrase n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EIM6_9LACO Length = 370 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 70/340 (20%), Positives = 130/340 (38%), Gaps = 49/340 (14%) Query: 81 KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 +TFG+L D W + + + ++ K L ++ + +I D N N+LL Sbjct: 70 RTFGDLYDFWFEQYKNTVRGSSYYVIKKGLDKNVYPYLKNKQLKNITLIDCQNLFNKLLK 129 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI--K 198 N ++ T +L++A I P V K + + Sbjct: 130 TNP-------GNYVILSIYT--------KKILQYAVTLKLIPENPMNNVIKPREKKTYGS 174 Query: 199 PDPLSKTEFNALM---ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 + SK E + + EK L++ YSG+R GEL AL D+D +++ + Sbjct: 175 NNYYSKEELKTFLAYSKKEKFHVYVLFRLLAYSGMRIGELLALKVADIDFNTSQISITKT 234 Query: 256 LTI----LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 ++ PKT G R +++ + + K +K Sbjct: 235 ISSDADSRFELHKPKTTTGNRIISVDPDTINLVSTLIK--------------------DK 274 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 +K F+F C+ YS ++ N +K+A +R+ + + RHT+ L +G N Sbjct: 275 KKDDFIFRFYGCS----KPYSPRTVALWKNKIIKKANLRKISLHGFRHTYTSLLFESGVN 330 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 I Q+GH +M +Y + N++ + + L+ Sbjct: 331 IKKIQKQLGHSKVEMTLNVYTHLSRN-NNDIGSKFDNYLN 369 >UniRef50_Q24ZE5 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24ZE5_DESHY Length = 308 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 119/317 (37%), Gaps = 29/317 (9%) Query: 109 QLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALL 168 L + + +S +R ++ + L P + R++ Y A+L Sbjct: 1 MFTPLILPQLGNLKLSDLRPGHLMKFYKYLEQDGIRQDGKPGK----LSDRSIRYYHAVL 56 Query: 169 CSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES---EKGQSQNLWKFA 225 S+L A + I++ P V+ + R + +T+ L+++ E + + L A Sbjct: 57 SSMLEDAMKWQLITSNPAARVEAPKVRRKQTTSYDETQSAELLQALYSEPIKYRVLTTLA 116 Query: 226 VYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQPAL 281 +Y+GLR GEL L W+ +D+E + V + G KT R +++ + Sbjct: 117 LYTGLRRGELLGLEWKVIDMENAQIAVVKQSQYTPETGVVDRKTKTEGSQRLISIPTSIV 176 Query: 282 EALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSS-----L 336 LKE R + + + NGK +VSS L Sbjct: 177 TLLKEYKAAQNEERLKVGSLWQPSDK-----------LFTTWNGKPMHPDTVSSWFNDFL 225 Query: 337 GARWNAAVK--RAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMW 394 ++ +A + + RHT A L+ G ++S++GH + + +IY Sbjct: 226 TRYNEKTIQQGKASLPHIRFHDLRHTSASLLIAQGVPLKNVSSRLGHSSIAITADIYASA 285 Query: 395 IDDMNDEQIAMLNARLS 411 + + E L L+ Sbjct: 286 LQSADKEAAQKLEDILN 302 >UniRef50_B2TMD1 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=3 Tax=Clostridium RepID=B2TMD1_CLOBB Length = 386 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 123/339 (36%), Gaps = 28/339 (8%) Query: 83 FGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 + IW + + + NT K K + + ++ +I + ++L Sbjct: 61 LKDYLKIWLEDYVKPNNSENTYIKYKGTVNKYINPQLGLIKLCDLKVINIEQFLSKL--- 117 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 K ++ T+ + +L L A + ++ P + V +R++ K Sbjct: 118 ----------KKTKLSLTTIQKHYLVLNGALNKAIKLQMLNDNPCKYVDTPKRSKYKASI 167 Query: 202 LSKTEFNALMESEKGQSQNLWK------FAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 L+ E +++ + + + + +GLR GE+ L W D+D + I+NV Sbjct: 168 LTFEELHSIYTNLNTKIYEDYIMKLGMDLTIETGLRRGEMCGLQWSDIDFDNKILNVNTA 227 Query: 256 LTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 L ++ KT++ R + L ++ LK ++ Y + + K Sbjct: 228 LIRVNNDYKISNLKTDSSYRKLPLSNEIIKILKSHKSKQNINK----IKYGNNFVYSNKF 283 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR-RNPYHTRHTFACWLLTAGAN 371 + + Y S+ R K I + + RH+ A LL + Sbjct: 284 DGDSTEYNLIFTWENGRYIIPSNFLQRLKRLCKYCKIEKNIRWHDLRHSNATILLKNKIS 343 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 I ++GH Q +IY ++MN E +++ L Sbjct: 344 MKVIQERLGHSLMQTTSDIYAHVTEEMNREATDVISNVL 382 >UniRef50_A7B6B9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7B6B9_RUMGN Length = 387 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 74/405 (18%), Positives = 141/405 (34%), Gaps = 55/405 (13%) Query: 24 KRCRETLKGWEITNSN--IKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIK 81 R R KG T N +KK + +E+ G + Sbjct: 8 YRGRFYYKGETYTKDNADLKKLVQEMEDLRYEVKHG----------------LKGKGDNI 51 Query: 82 TFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 T DIW K+ + +T + + ++ + + Sbjct: 52 TLDTWFDIWLNTHKKRTIKESTQVRYDDFYRRYIKKQIGKQRVADFNPIILERLLQNMAD 111 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD 200 + + +T+ + +L ++ ++A + ++ P GV+ + + Sbjct: 112 DD-------------YSTKTIRDVYNILNAMFKYAVHNRILTFNPCAGVEVPKTKTKQIR 158 Query: 201 PLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 L+ E ++E K + +NL + A+ +G+R GEL L W+DVD K ++V + L + Sbjct: 159 VLTVKEQREVLEHAKERIHENLIQVALGTGMRGGELLGLTWDDVDFRKREISVNKTLVYI 218 Query: 260 D---------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 + PKT IRT+ + +ALK Q+ + S + E Sbjct: 219 KDKETKKYVFKYQTPKTKNSIRTIPMQDSVYKALKRQWIQLKEMQLSASEWQPLEGF--- 275 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKR---------AGIRRRNPYHTRHTF 361 + L FV + ++ + N K+ I P+ RHTF Sbjct: 276 -ENLVFVGKNGKPITEHTFQVTLDWIEKSINKERKKQAEKNKTVFIPIPHFYPHALRHTF 334 Query: 362 ACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 A AG + + +GH + + ++Y DD ++ L Sbjct: 335 ATRCFEAGIDAKVVQGFLGHYSIAITLDLYTHVTDDKAKSEMDKL 379 >UniRef50_C7T893 Phage integrase n=5 Tax=Lactobacillus RepID=C7T893_LACRG Length = 385 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 118/355 (33%), Gaps = 41/355 (11%) Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 S G F ++ + W + +T +T + I+ I Sbjct: 57 SNGDLEEEKPKPVFFRDVYEEWYGNYINTVRESTWARTAGMFNNHILPAFGGKRIATITT 116 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 D+ T + + S++ +A + G++S P + Sbjct: 117 KDVQKAVKRWFEF---------------TSANYKRWYNYVSSVMDYAVRQGYMSKNPAKA 161 Query: 189 VKKLQRNR----IKPDPLSKTEFNALMESEKGQSQN----LWKFAVYSGLRHGELAALAW 240 V + + +K + N ++ +++ ++G+R GEL AL W Sbjct: 162 VVLPHHDDLAGDKPENFWTKEQMNHFFACIDQENHFDVFIMFRVLAFTGVRRGELLALTW 221 Query: 241 EDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 DV ++ + V + LT D + PKT AG RT+ + + LK ++ Sbjct: 222 NDVSFKENSIKVNKTLTQGDKGHQIVQAPKTRAGRRTIPVDGQTMAYLKRWRRIQQE--- 278 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRRNPY 355 TF + +L F + Y S+++ R + G+ R + Sbjct: 279 ---TFLQLGINTMQPNQLLF-------TNTKNGYQSLNTPSKRLHKLQDDNGLTPRITIH 328 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RH+F LL AG + +GH + +Y E A L + Sbjct: 329 GFRHSFISNLLIAGVPVTSVQKLVGHTDPTITLGVYAHVSAKQESEATAALAKYM 383 >UniRef50_A6NY15 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NY15_9BACE Length = 417 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 78/353 (22%), Positives = 137/353 (38%), Gaps = 33/353 (9%) Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 + + T E W K+ + E+ +T + ++ I Sbjct: 53 KQVSTRPVVKTEYTLDEWYAQWIKVYKYEVRDSTRLQYSHVYTKHVSPALGHYLLTQITT 112 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 ++ + N++ K+G + + +L L A F P G Sbjct: 113 LEVKRFLNDM-------------KKRGFSFEMRNKARIVLLDLFDKAIMDDFAFKNPARG 159 Query: 189 VKKLQRNRIKPDPLSKTEFNALMESEKGQSQN-LWKFAVYSGLRHGELAALAWEDVDLEK 247 +K ++ R++P LSK E ++ KG L+ AV +GLR GEL AL W DV+L++ Sbjct: 160 IKVVRDERVEPRVLSKEEQVDFFDTCKGTFYEELFTVAVLTGLRPGELFALRWSDVNLKE 219 Query: 248 GIVNVRRNLTILDMFG---------PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 ++V R L + G PPKT +R V + AL Q++ +KS Sbjct: 220 KYLDVTRTLLYQKLEGDTGKAFHIHPPKTATSLRRVYFDERCKLALMSQFR-----KKSN 274 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYS--VSSLGARWNAAVKRAG-IRRRNPY 355 I+ RE + +F+ + YS + + N + + + Sbjct: 275 ISL--RETSSPLEGLEDLLFVTKYNTPLNSSLYSSAIQRIVDLINESRSAVDQFETFSGH 332 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 RHT+A A +P + Q+GH T +M ++Y +D E++ L+A Sbjct: 333 CFRHTYATRAFEADVDPKVVQKQLGHATLKMTMDLYTHLFEDKKLEELTKLDA 385 >UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC Length = 431 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 115/350 (32%), Gaps = 34/350 (9%) Query: 82 TFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 T W I T++ + ++ I ++ + D+ N + Sbjct: 96 TMERFLTYWLSDIVTPACKPRTVQGYEVIVRNYLIPAIGKKRLNKLNGVDVRNLLKRVRG 155 Query: 141 GETLYLDNP---------------RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 L R + + R V ++L ++L A + + Sbjct: 156 TCLCCLHGTDRRRPVKQRRCCAVGRCCHQAPSARLVQQVHSVLRNVLGAAVREELVGRNV 215 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAWEDVD 244 + K LS + + L+++ + L+ A+Y GLR GE+ L WED+D Sbjct: 216 AKLAKVSGPTYKVHRGLSADQASHLLKAAAHDRLYALYVLALYLGLRRGEILGLRWEDID 275 Query: 245 LEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 E + VR +L + PKT RT+ LL + L+E R++ Sbjct: 276 FEDETLAVRHSLQRVGGHLRVVAPKTRTSERTLPLLPLIAKVLREHQARQDAERETA-DV 334 Query: 302 YHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTF 361 RE G FVF + +L W G+ + RHT Sbjct: 335 NWRETG--------FVFTTAIGT-----PIEPDNLRRSWLPLCGVLGLEGVRFHDIRHTC 381 Query: 362 ACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 LL AG P + GH + EIY D + L L+ Sbjct: 382 VTLLLNAGVPPHVVREIAGHSAIDVTMEIYAHASLDDKRAALQKLVDELA 431 >UniRef50_B0ABY5 Putative uncharacterized protein n=3 Tax=Clostridium RepID=B0ABY5_9CLOT Length = 370 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 127/338 (37%), Gaps = 34/338 (10%) Query: 77 TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 + + + + L+ T K + + ++ ++ I NY + Sbjct: 59 APNDMKLEKYLMDFLEKYKPNLSITTYNCYIRICKKYINPMLGNIKLNDLKPIHIQNYVD 118 Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 +L+ + +T+ +I +L L+ AY+ + + ++ + + Sbjct: 119 DLVGI--------------LSPQTIKIHINILNLALKRAYKLKLVKYDIVDCIEVPKNKK 164 Query: 197 IKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 K + + + L+E+ K L A+ GLR E+ L+W D+D + + + + Sbjct: 165 FKSEVYDQKDIAKLLETIKNTDLELPINLAIGLGLRISEVLGLSWSDIDFTENTITIEKI 224 Query: 256 LTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 + PKT+ RT++ + + LK+ + Y ++ + + + Sbjct: 225 TARDSGKVILKEPKTDTSKRTISAPKEVMAMLKDYKRK-----------YLQDKLQGKIK 273 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 + +F+ K + + L +++ +K+ ++ + RH+ L+ A Sbjct: 274 DCNLLFLD-----KNENPIAEDVLSKKFSRFLKKHNLKHIRFHDLRHSHVTLLINAKVPI 328 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 I+ ++GH IY + +M+ E ++ + Sbjct: 329 KVISERVGHSNVNTTLNIYSHTLKEMDQEASEKISESI 366 >UniRef50_B2THD3 Site-specific recombinase, phage integrase family n=3 Tax=Clostridium RepID=B2THD3_CLOBB Length = 384 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 132/340 (38%), Gaps = 27/340 (7%) Query: 77 TRVIKTFGELCDIWTKIKET-ELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 T F + + W + ++ NT ++ + + + +S + S I ++ Sbjct: 58 TNSNILFKDYINKWFNEYKVLNVSINTKNDYIYRINAHVVPMIGNYKLSELSTSIIQDFY 117 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 N+L+ ++KG + ++ L++A +S I P + ++K + Sbjct: 118 NKLI------------SEKGMKPVSAKKVYDIVNGCLKYAKKSKLIYDLPTD-IEKQKLV 164 Query: 196 RIKPDPLSKTEFNALMESEKGQSQNLWKFA-VYSGLRHGELAALAWEDVDLEKGIVNVRR 254 + + + +K E + ++ F V +GLR GEL L W DV+LE G + V Sbjct: 165 KPEIEFWTKKEIDFFLDKINDLYLYSPVFLDVLTGLRVGELCGLRWCDVNLESGYIEVNS 224 Query: 255 NLTILDMFGPP------KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 + + KT+ R +++ ++ LK K + +++ RE Sbjct: 225 QVIQDRINKELIFSSILKTSTSHRNISIPPVLIDFLKA-MKEDNNALENDFVILSREGLM 283 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG-IRRRNPYHTRHTFACWLLT 367 + L F V K+ S+ + K +++ + + RHT A L+ Sbjct: 284 CNPRNLSMNFTKTVAKYKK----SIDDIEKENKEVPKDYMQLKQISFHGLRHTHATLLIF 339 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 G N ++ ++GH + Y +DDM +LN Sbjct: 340 NGENIKVVSDRLGHRDISITLNTYTHIMDDMKSNTATLLN 379 >UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36A2 RepID=C7XQF9_9FUSO Length = 351 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 132/336 (39%), Gaps = 46/336 (13%) Query: 78 RVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNE 137 + TF L ++ ++ + TM+ + + T + E + I+ I ++ + Sbjct: 57 SIEMTFKSLYSLYHNDMKSRIKKTTMETKEYIVNTKILPFFEKMKVKDIKPIHIRKWQTD 116 Query: 138 LLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL-QRNR 196 LL E + + L ++ +A + + P + +++ Sbjct: 117 LLKME-------------YSKTYLKTIYNQLTAIFNYAIRFHNLDKNPCHIAGSIGKKDA 163 Query: 197 IKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 + LS EFN +++ +++ + ++G+R GEL AL +EDVD E + + +N Sbjct: 164 DEMQILSLQEFNKMIDCVTDKENKFFYIILFWTGMRKGELLALTYEDVDFENKTITINKN 223 Query: 256 LTILDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 I+ PKT G R + + L +K+ + + K++ FY Sbjct: 224 FQIVKKERLITDPKTPRGRRVIAVNDVVLNCIKDLWNTSYKPNKTDKIFY---------- 273 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 S SL + + A K+AG+ R + RH+ A +LL+ G N Sbjct: 274 ------------------LSKDSLKRQLDTACKKAGVPRIRVHDLRHSHASYLLSNGVNI 315 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 ++ ++GHE Q IY D +LN+ Sbjct: 316 VILSRRLGHEKVQTTLNIYCHICPSSEDRLNDVLNS 351 >UniRef50_Q0H247 DNA integration/recombination protein n=6 Tax=root RepID=Q0H247_9CAUD Length = 394 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 70/394 (17%), Positives = 128/394 (32%), Gaps = 64/394 (16%) Query: 38 SNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE 97 K+A A + EIN+G + F + W I Sbjct: 39 KTKKEAQLAAAKLYDEINNGGYV----------------KDTNILFKDFAQEWLAIYSET 82 Query: 98 LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRT 157 +T++ K +L + + + + + +L KKG Sbjct: 83 AKISTIRARKHELG-HLMRYFGNLKLKDVTRKMYQDMLLDL-------------KKKGYA 128 Query: 158 VRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR---------IKPDPLSKTEFN 208 T+D + + A + I++ P E K ++ + L K E Sbjct: 129 DNTLDGIHTTGRMIFKKAMELELINSNPTEYAKVPKQKKTVEDIESGNKDMKFLEKHELA 188 Query: 209 ALMESEKGQ----SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT------I 258 +++ + ++ Y+G+R GEL AL W+D++ ++ + + + L Sbjct: 189 LFLKTAQEHGLAMDYVVFSTLAYTGMRLGELLALQWKDINFKEHTIAITKTLYSPRNNER 248 Query: 259 LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVF 318 PPKT IRT+ + + LK+ + YH L FVF Sbjct: 249 YYQLLPPKTQGSIRTIKVDPNIISLLKKHKAEQNEIKLRMGELYH---------DLGFVF 299 Query: 319 MPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRRNPYHTRHTFACWLLTAGANPAFIAS 377 + R ++ A I + P+ RHT L+ AG I Sbjct: 300 A-----RPSGFPEVPKKIEIRMKRLLRIANIHKHVTPHSLRHTHTSLLIEAGVGIKEIQQ 354 Query: 378 QMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 ++GH + IY D+ + + +S Sbjct: 355 RLGHADIETTMNIYAHLTKDLEERASQKFSELMS 388 >UniRef50_C4ZBA5 Phage integrase family protein n=10 Tax=Firmicutes RepID=C4ZBA5_EUBR3 Length = 363 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 142/361 (39%), Gaps = 53/361 (14%) Query: 55 NSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLR 114 E+ R F +S + + G D++ + K EL T+K + ++ Sbjct: 42 KKEALEWEREFLKS------TSANMEMMLGAFVDVYFQDKAGELKERTIKNKQYMIEAHV 95 Query: 115 IIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRF 174 + + ++ I SDI+ ++NE+ KG + + + +L Sbjct: 96 LPYFANKRMNEITPSDIIQWQNEM-------------RAKGYSQTYLRMVQNQITALFTH 142 Query: 175 AYQSGFISTKPFEGVKKL-QRNRIKPDPLSKTEFNALMESEKGQSQN--LWKFAVYSGLR 231 A + P + VKK+ + + K + +K E+++ + +S+ +++ ++G R Sbjct: 143 ACNIYNLGNNPCKKVKKMGKADADKLNFWTKAEYDSFIRGIDKESRYFVIFEILFWTGCR 202 Query: 232 HGELAALAWEDVDLEKGIVNVRRNLTI---LDMFGPPKTNAGIRTVTLLQPALEALKEQY 288 GE+ AL D+D E +++ + D+ PKT IR + + E LK++ Sbjct: 203 EGEMLALTKSDIDFENNQISITKTYYRTERRDIITTPKTEQSIRVIDIP----EFLKKEI 258 Query: 289 KLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG 348 + + +R YG + ++L ++ + ++G Sbjct: 259 EA----------YVNRCYGLPDNERLF--------------PIVAEAVQHKLKRECAKSG 294 Query: 349 IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 +++ + RH+ +L+ G P I ++GH ++ YG + + MLNA Sbjct: 295 VKQIRVHDLRHSHVAYLINQGVQPLIIKERLGHRDIKITLNTYGHLYPNQQKKVADMLNA 354 Query: 409 R 409 Sbjct: 355 T 355 >UniRef50_B9KYK7 Putative integrase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYK7_THERP Length = 359 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 110/345 (31%), Gaps = 38/345 (11%) Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 + T ELC+ W + T + L+ + +S + Sbjct: 41 ERKLAIDQAPPVGRVTVRELCERWLATERKRWKPKTYYDYRWHLEHHVYPVLGRVQLSKL 100 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 + + + L + R+ + LL + GF+ P Sbjct: 101 TPDRLQRFFDSL------------------SGRSANLTFRLLHRCFVVGIRWGFLGQNPC 142 Query: 187 EGVKKLQRNRIKPDPLSKTEFNALMESE---KGQSQNLWKFAVYSGLRHGELAALAWEDV 243 + V + L L ++ GLR GE+ AL W D+ Sbjct: 143 DRVVPPAYQAPPIELPDADALARLFRYCLESDDPYAGLVGLSLLCGLRRGEITALRWSDI 202 Query: 244 DLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 DL+ G ++V R+ + + PKT AG RT+ + + + L+ Q L + Sbjct: 203 DLQTGQLSVVRSGQWIAGRWVETEPKTRAGRRTIYVGEQGIRLLRRQKALVAQLKLQAGP 262 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 + Q+ VF G S S + A K +G+ + RH Sbjct: 263 AW---------QEHGLVFP-----GPNGQPLSPSRVAAAVQRICKASGVPPLRHHSLRHA 308 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAM 405 A L AG ++ Q+GH + +Y I D A+ Sbjct: 309 SASLALLAGVPLPEVSRQLGHANVSITARVYSHCISDGRRVTEAI 353 >UniRef50_UPI0001C375E4 hypothetical protein RflaF_02473 n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C375E4 Length = 399 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 73/415 (17%), Positives = 143/415 (34%), Gaps = 46/415 (11%) Query: 8 VEIRGRYIRIW----FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + RG +I + G + +T+ N K+ + FE Sbjct: 4 IRKRGNSYQIRVSCGYDTSGNQVVQTMTWKPADGMNKKQIEKELQK-----QAILFE--- 55 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 K T IK F + + W + + L + ++ K L Sbjct: 56 -----DKCMKGQVTANIK-FQDFAEQWFEEYAKLNLRNTSYERMKQ-LTVRVYPAIGHLR 108 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + I I + N+L N + + +T ++++ + + +A + ++ Sbjct: 109 LDKITSRHIQQFINDLA-----LNGKSLKNGRPLSRKTAVHHLSFISDVFSYAVKMEMLT 163 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFN---ALMESEKGQSQNLWKFAVYSGLRHGELAALA 239 P + V + + + D + E L+E+ + + + A+YSG R GE+ L Sbjct: 164 DNPCKRVTVPKGEKKEKDIYTLEEVAHLFQLLETAPLKYRVFFTLAIYSGFRRGEMLGLE 223 Query: 240 WEDVDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 W+D+D E +++VRR G KT R++ Q ++ L+E R Sbjct: 224 WKDIDWEHNVISVRRTSNYTASKGIYTDTTKTKKSQRSLKFPQSVMDLLREYKAEQDEER 283 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 T + + +L + R N PY+ + R + + Sbjct: 284 VKLGTKWQ------DYDRLFVKWDGRPMNN-NTPYF-------WLKEFCEENNFRFCDIH 329 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RH +A L+ G + A ++ +GH T IY + + + L Sbjct: 330 SLRHFYASALINEGVDAATVSGALGHSTITTTTSIYCHVFNQAQARAGDAIASVL 384 >UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973B6A Length = 408 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 80/341 (23%), Positives = 128/341 (37%), Gaps = 34/341 (9%) Query: 82 TFGELCDIWTKIKETEL-TTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 T D W +I + + NT K K + + I I EL Sbjct: 67 TLSVWFDNWLEIYKYNVIRDNTRVYYKQVFKKHIEPLLGHKRLKDITQLHIRALLKEL-- 124 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD 200 +K+G +T + +L + A + P +G++ + N+ Sbjct: 125 -----------DKQGLQFQTQNKVRVMLLDMYNKAILDNYAVRNPAKGIRLPKHNKRNKR 173 Query: 201 PLSKTEFNALMESEKGQSQ-NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 S E + KG NL+ AV +GLR GEL AL W+D+DLEK +NV + L Sbjct: 174 VFSVEEQIDFFDCCKGTFYDNLFTVAVNTGLRQGELCALTWDDIDLEKKEINVEKTLLYQ 233 Query: 260 DMFG---------PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 + G PPKT R V + + ALK+Q + R+ + E Sbjct: 234 KLEGDTGKTFHINPPKTKTSNRKVPINKQCEIALKKQLIQRNN-------IISRQSAKPE 286 Query: 311 KQKLHFVFMPRVCNG--KQKPYYSVSSLGARWNAAVKRAG-IRRRNPYHTRHTFACWLLT 367 K + +F + Q ++ + N+ P+ RHTFA Sbjct: 287 KGFENLLFTTKYATPICDQILIDAIKKIVNEINSVRSEIEQFEMFTPHCFRHTFATRCFE 346 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 AG +P I + +GH T QM ++Y ++ I+ L+ Sbjct: 347 AGISPKVIQTYLGHSTLQMTMDLYTSVFKHCEEKAISRLSE 387 >UniRef50_C7N6A1 Site-specific recombinase XerD n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6A1_SLAHD Length = 451 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 67/365 (18%), Positives = 126/365 (34%), Gaps = 64/365 (17%) Query: 82 TFGELCDIWTKIKETELTTN--TMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELL 139 T E + W + ++T + T+K ++LKT ++ + ++I +L Sbjct: 75 TVSEFIETWLEARQTTGKVSEFTIKNYHARLKT-IEPYIGKKKLNKVTAAEIERAYAQL- 132 Query: 140 HGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP 199 KK + T++ LL S+ A I P V+ ++ Sbjct: 133 -----------KAKKSLSDTTLNKLHILLKSVFEKACDYDLILRNPCNKVESPSVDKPDR 181 Query: 200 DPLSKTEFNALMESEKGQSQNLW----------------------------------KFA 225 L++ E L+ + + + A Sbjct: 182 KSLTQEEGATLLHKLDLEEARIIQEMDEKEERQVKKGNQFGRSSIRGLANLGFTIGTRIA 241 Query: 226 VYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALK 285 + +GL GE+ L W++V+L + + V + LT PKT AG RT+++ + L+ Sbjct: 242 LATGLHRGEVFGLTWKNVNLRQNTITVAQTLTKEGEIKDPKTGAGRRTISIDESTAAHLR 301 Query: 286 EQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVK 345 K K + VC ++ + ++++ W + Sbjct: 302 MWRKRQREE--------------LAKLAIKLGDATPVCCSERGEWVNLANFERWWRSFRD 347 Query: 346 RAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAM 405 AG + RH+ A LL G + + +MGH + Y I + ND++ A Sbjct: 348 DAGFEGLRFHELRHSQATLLLANGTDLKTVQDRMGHANGAITLNWYAHAIPE-NDQKAAQ 406 Query: 406 LNARL 410 L L Sbjct: 407 LVGNL 411 >UniRef50_Q65KE0 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KE0_BACLD Length = 381 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 66/337 (19%), Positives = 129/337 (38%), Gaps = 38/337 (11%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F + W + K+ L ++T+ + QL + + I I + +Y N L Sbjct: 67 FSTFAEKWFESKKVRLRSSTIVNYREQLDYNILPYLGTFKIKDITEEVLQHYINRL---- 122 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 N++ T+ ++ +L+ A + G + V NRI Sbjct: 123 --------HNERKLAPATIRTAFGVVAEVLKKASRKGAFDLAILDDVNLPPENRIS-KVW 173 Query: 203 SKTEFNALMESEK-----GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT 257 +++ A +++ + +V +G+R GE+ L W D+D EKG + +R+ L Sbjct: 174 NESNVQAFLDARNRIVSLTRYFIGMVLSVITGMRMGEVLGLRWSDIDFEKGYLTIRQTLA 233 Query: 258 ILDMFGPP------KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 +D G KT AG RTV L + +E L E K+ ++ Sbjct: 234 KIDDEGNYGLVPEVKTAAGFRTVHLPKFFIEYLIEHKKMVQREKEILGE----------- 282 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 ++ V K + ++ + + + + + P + RHT A +L++ G + Sbjct: 283 ---DYIDYDLVVCTKHGKWVHPNNYRRAFTRLIAQLELPKIPPKNLRHTHATYLISIGIS 339 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 P + ++GH + Y + M E + L+ Sbjct: 340 PKIVQERLGHAHIKTTLGTYSHVLPSMQAELVGKLDD 376 >UniRef50_A0QET6 TraSA:integrase fusion protein n=1 Tax=Mycobacterium avium 104 RepID=A0QET6_MYCA1 Length = 382 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 74/406 (18%), Positives = 139/406 (34%), Gaps = 67/406 (16%) Query: 11 RGRYIRIWFMFRGKRCRETLKGWEITNSNIKK-AGNLRALIVHEINSGEFEYLRRFPQSS 69 GR +R + + RE + + K A + + +G++ Sbjct: 23 HGRGMRWRATYVDDQSREHSRSF-----GRKVDAQRWLDEVTAAVVTGQYV-------DP 70 Query: 70 TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYS 129 ++ TF + + W K ++ ++ L+ ++ I S Sbjct: 71 KAGQI-------TFRDYAERW--RKMQVQRPSSRAHIETMLRRHAYPTLGDRQLTSILPS 121 Query: 130 DILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV 189 D+ + L TV L+ ++++ A + ++ P +G Sbjct: 122 DVQAWVKGLQ----------------LAPATVGVVHGLVSTVMKSAIRDRRLAANPCDGT 165 Query: 190 KKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 K + R + PL+ + A+ + Q L A +GLR GE L + V + + Sbjct: 166 KLPKVQRPQIVPLTTEQVEAVRAELPAELQALVTLAAGTGLRQGECFGLTVDRVRFLERV 225 Query: 250 VNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 + V R L + FGPPKT A R + L + Sbjct: 226 LTVDRQLVTVAGQAPTFGPPKTRASNRAIPLPKVV------------------ADALAAH 267 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN-PYHTRHTFACW 364 + VF +Q + S+ G RW AAVK A + + RH +A Sbjct: 268 LAAFPAEPDGLVFT------QQGKPITRSTFGYRWRAAVKEAKLPHGTGFHALRHYYASL 321 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 L+ G + + +++GH +A + Y D +D +++ L Sbjct: 322 LIRHGESVKTVQARLGHASAVETLDTYSHLWPDSDDRTRDAIDSVL 367 >UniRef50_C1SIY0 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIY0_9BACT Length = 386 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 79/419 (18%), Positives = 144/419 (34%), Gaps = 55/419 (13%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEIN-----SGEFE 60 + + + I F +RGKR R L G T N L+ I GE + Sbjct: 2 ASIRVDKDVLYIDFSYRGKRKRVYL-GLSNTAHNRAILEAKINLLDGAIKGEKLGLGEVD 60 Query: 61 YLRRFP-----QSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRI 115 + + FP Q V + TF L W +T + NT + S + Sbjct: 61 FKQIFPGLGLFQKPKEELEVDRFLTATFDVLYLEWID-HKTHIAKNTRRTMLSFHRNHIS 119 Query: 116 IICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFA 175 + I DI + + V+ + + S Sbjct: 120 PYIGHKLLGDITEKDIRMMMTVMSKVNRNVV--------------VNRKLRSVRSFFNEV 165 Query: 176 YQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALM---ESEKGQSQNLWKFAVYSGLRH 232 + G + PF+ VK L+ ++ P ++ E L+ + ++ F +SG R Sbjct: 166 VEEGHLKESPFKKVKYLRNEKVDIKPFNQEELARLLVGFAEKYPAYESFVAFLAFSGCRP 225 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 E+ L W+ +D E + +R +L KT++ +R + + +P L +Q Sbjct: 226 NEVVGLKWDKIDWENRKILIREGF-VLGEETLLKTDSSVRDIDMTEPLEVLLLQQL---D 281 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 SE F + F R+C + +++ +K I R Sbjct: 282 KGIDSEYVFVNE-------------FNRRIC---------WENFRQKYHRVLKLKNIVSR 319 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 Y RHTFA + G + +++ +GH + Y +I + + +++ S Sbjct: 320 PAYQLRHTFASMAIKNGEDILWVSRMLGHSNLKTTLTTYTRYIPSLERKDGSIIGGIYS 378 >UniRef50_C3IU95 DNA integration/recombination/inversion protein n=2 Tax=Bacillus thuringiensis RepID=C3IU95_BACTU Length = 392 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 76/408 (18%), Positives = 138/408 (33%), Gaps = 68/408 (16%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR ++ ++G+ K+A A I E+ +G + Sbjct: 28 GKRKQKKVRGF----KTKKEAQLAAARIEQEVANGTY----------------INEPDIL 67 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F + W I +++ + + + + + + I N+L Sbjct: 68 FKDFVQEWLNIYSKSTKISSL-RVRQKQSNKLVDFFANIKMKDITKKMYQTALNDL---- 122 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR-------- 194 + KG T+D + + A + I + P + VK ++ Sbjct: 123 ---------HDKGYAFNTLDGIHTAGRMIFKKAIELQIIKSNPTDNVKLPRKVETVEDIE 173 Query: 195 -NRIKPDPLSKTEFNALMESEKGQ----SQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 ++ L K E ++ K + + YSGLR GEL AL W DVD E Sbjct: 174 NDKKAIKYLEKEELAHFLQVAKEKGLDNDYVFFSILAYSGLRAGELLALKWTDVDFENNT 233 Query: 250 VNVRRNLTILDMFG------PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 + + + L D PKT IRT+ + Q ++ LK +++E+ Y Sbjct: 234 IKITKTLYNPDNNSQHYHLLTPKTKGSIRTIKMDQGIMKLLKSHKA-----KQNELKLYT 288 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRRNPYHTRHTFA 362 R +V V + + R +K + I + P+ RHT Sbjct: 289 R---------PQYVDQGFVITKASGYPEVMKMIQNRLKRLIKLSNITKNITPHSFRHTHT 339 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 L+ AG I ++GH + IY +M ++ + + Sbjct: 340 SLLIEAGVGIKEIQQRLGHTDIETTMNIYAHMTKNMEEKASQKFSELM 387 >UniRef50_B0VUJ0 Putative integrase n=1 Tax=Acinetobacter baumannii SDF RepID=B0VUJ0_ACIBS Length = 356 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 98/363 (26%), Positives = 162/363 (44%), Gaps = 28/363 (7%) Query: 50 IVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQ 109 I EI G+F + FP S K + ++ E+ +T + Sbjct: 18 IKLEIQLGQFNLAKHFPNSKHLKKNQIS-------YYAQLYLSQTIKEVAPSTYDSYRGH 70 Query: 110 LKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLC 169 + I T I + + + L + N +TVR + + + Sbjct: 71 VYNHIIPKWGQTNPKDINTNMLKKWIEVL-----------KENLNNKTVREIVTRFSQIH 119 Query: 170 SLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYS 228 ++ R + PFE + Q + +PDP SK E ++ +E QNL ++ Sbjct: 120 AIWR---DERQMPYNPFENIVIHQVDTPEPDPFSKVEIAMILNTETDLDIQNLLPCLFWT 176 Query: 229 GLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQY 288 GL E +AWED+DLEKG + + R+ + ++ K R + LL+PA+ ALK+QY Sbjct: 177 GLSMSEQIPIAWEDIDLEKGTIQISRSY-VRGIYRVTKNRRRKRRIKLLEPAINALKKQY 235 Query: 289 KLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG 348 ++TG+ R I R+ +K+ FV++ N ++ ++ L RWN +K+A Sbjct: 236 QITGNARAKTIEVLQRDNKTKRTEKVRFVWI----NHERSNHFEYHELRYRWNKHLKKAK 291 Query: 349 IRRRNPYHTRHTFACWLLTAG-ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 +R+R RHTFA LLT+G P +IA Q+GH M+Y+ YG I + + I LN Sbjct: 292 VRKRGINQGRHTFASQLLTSGQVPPEWIAEQLGHSDTSMIYKHYGKLIAEDMPDYITKLN 351 Query: 408 ARL 410 + Sbjct: 352 NYI 354 >UniRef50_UPI0001C37419 Phage integrase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37419 Length = 386 Score = 214 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 78/420 (18%), Positives = 135/420 (32%), Gaps = 53/420 (12%) Query: 6 TGVEIRGRYIRIW-FMFR---GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEY 61 + R I F R GK+ ++ ++ KKA L FE+ Sbjct: 2 ANITNRNGKFLIRVFTGRDISGKQIVKSTTYVPPEGTSPKKAEKLAQEY-------SFEF 54 Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIIICES 120 R F EL + + + E L T+ +SQ + I + Sbjct: 55 ERH------CKGYAQLNENMRFYELAEWYFENYAPEELKPTTVLNYESQYRNHIAPILGN 108 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 + I + + L L +V ++ S+ R A Q GF Sbjct: 109 KKLKDITTPMLTEFLKVLGKEHHLN------------PISVRKVYIVVQSIYRRALQQGF 156 Query: 181 ISTKPFEGVKKLQRNRIKPDP-LSKTEFNALMESEKGQS-----QNLWKFAVYSGLRHGE 234 P + V ++ LS+ E + + + + + +++G+R GE Sbjct: 157 ARDNPCQNVIIPKKRDSGKRYSLSEEETKRFLHLIRDKPWDEDVKRILIVLLFTGMRIGE 216 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLT 291 LAWED+D EK + + L+ +D PKT + IR + + + L +Q Sbjct: 217 CLGLAWEDIDFEKKTIFIHHTLSCVDGKCYLDSPKTKSSIRLIAMNSTVEKYLNDQQAYV 276 Query: 292 GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR 351 + + Y V Q Y SS+ K Sbjct: 277 EQLKMALGNKYAH--------------PEMVFPSGQGNYRDRSSVYHSLKRMTKGTEFED 322 Query: 352 RNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + RH A LL +G + I+ +GH + IY + ++ +LS Sbjct: 323 MTLHKLRHCNATLLLNSGVDLKVISEHLGHCDIGVTANIYADVLRKQKIRLADTIDDKLS 382 >UniRef50_Q0REL9 Integrase (Recombinase) n=2 Tax=Frankia RepID=Q0REL9_FRAAA Length = 442 Score = 214 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 79/417 (18%), Positives = 137/417 (32%), Gaps = 64/417 (15%) Query: 25 RCRETLK-GWEITNSNIKKA-GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 R R T+ GW+ K G R + ++ + Q G K+VT T Sbjct: 39 RWRATVDLGWKDGKRQRKYLSGKTRTEVAEKLRT-------LHRQQEDGVKVVTGNKPLT 91 Query: 83 FGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 + W I ++ +T+ + ++ + + + + ++ Sbjct: 92 VDQWLTFWLDTIASRKVRPSTLATYRGYVRNRIVPELGGYRLDRLEPEHLESFYAAC--- 148 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 G TV ++ L+ A++ G ++ V R + P Sbjct: 149 ----------ESDGLAPATVLQMHRIISRALKIAHRRGKVARNVATLVDAPTVQRDEVSP 198 Query: 202 LSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEK--GIVNVRRNLTI 258 LS E A++++ KG ++ W A+ GLR GE L W VDL+ + VR+ L Sbjct: 199 LSAKEARAVLDTAKGGRNPARWSVALALGLRQGEALGLPWNAVDLDSTPATLTVRQALQR 258 Query: 259 LD-------------------------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 + PK+ AG RT+ L L+ Sbjct: 259 RAWAHGCTDPKSCGLARRCPQRTGGGLVIVHPKSRAGRRTIVLPAGLAADLRAHRSAQQQ 318 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 + T + E+G VF S+ W +K AG+R Sbjct: 319 EAEEAGTGWRNEHG--------LVFTQPT-----GHPIDPSADHRAWKNLLKAAGVRAAR 365 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RHT A LL +P + MGH + Y +++ + + A L Sbjct: 366 LHDARHTMASLLLAQKVHPRVVMEIMGHSQISLTLGTYSHVAPELSTDAANQMGATL 422 >UniRef50_D2Q711 Phage integrase n=2 Tax=Bifidobacterium dentium RepID=D2Q711_9BIFI Length = 367 Score = 214 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 81/392 (20%), Positives = 142/392 (36%), Gaps = 52/392 (13%) Query: 24 KRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTF 83 KR R T + + +S K G R +YL R + KT Sbjct: 13 KRYRVTYR--DPDHSQRTKRGFRR-------RKDAQDYLARMTTYIADNDYIDPNAGKTL 63 Query: 84 G-ELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 + D W K K+ + + + + I+ IR+S+I + +EL Sbjct: 64 VCQFADTWLKGKKNVVKPKYYADLECSWRVHVCNAWGNREIASIRHSEIQTWVSELA--- 120 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 K R+ +L +L A + G I P +G + ++ R + L Sbjct: 121 -----------KKRSATITIRAHGVLKGVLDLAVRDGSIRRNPADGCQLPRKQRKERTYL 169 Query: 203 SKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMF 262 + + L G Q L + GLR GE AAL + VD + + VR + Sbjct: 170 TPAQVIDL-AHAAGTYQALILTLGFCGLRWGEAAALRVKHVDTQNNRLRVRLSWVRSGKK 228 Query: 263 ---GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM 319 G PKT +R V + + A+KEQ + G ++ F G +Q Sbjct: 229 HFEGAPKTW-EVRDVPVPDQVMSAIKEQCEGKGPE---DLVFTAPSGGHLREQS------ 278 Query: 320 PRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 + + A++ +G+ + RHT A +++GAN + + Sbjct: 279 --------------AKNHGWYARALRDSGVPTLTCHDLRHTAASIAISSGANVKAVQRML 324 Query: 380 GHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 GH+ A M + Y D D+ ++++++ Sbjct: 325 GHKNAAMTLDTYADLFDTDLDDVATSISSKIA 356 >UniRef50_P96629 ICEBs1 integrase n=1 Tax=Bacillus subtilis RepID=INT_BACSU Length = 368 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 127/345 (36%), Gaps = 34/345 (9%) Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 + +F L I+ E + N + K + + I I + +I Sbjct: 52 EERARKSRSVSFPTLISIYLASCEIDSKPNYYQNQKYIINKHISDYFLKSDIQKITHREI 111 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 ++R L+ + G + ++V+N + L + A + P + VK+ Sbjct: 112 TDFRKHLM-------------ETGLSNKSVNNIMTSLSKIFDTAVHEEILKRNPCDNVKR 158 Query: 192 LQRNRIKPDPLSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALAWEDVDLEKG 248 L R K EF + + + A +GLR GE+ AL W+D+D Sbjct: 159 LPLTRKKMKFWRPEEFKKFISLIPQDQLLFKTFYTVAFLTGLRCGEMLALQWKDIDKILL 218 Query: 249 IVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 ++V ++ T LD + PKT IR V++ + L+ L E++K +E+ H Sbjct: 219 EIDVHKSCTWLDGQFVVTTPKTKNSIRRVSINKKLLKLL-ERWKEAQEELFNELGIRHSH 277 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWL 365 ++F + ++ + K + + + RH+ L Sbjct: 278 --------DTYIFQYKDTPSRK------DIFSRKIKYFCKDSDLTPIRLHDFRHSHVALL 323 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + G + I ++GH + + ++YG + E L+ L Sbjct: 324 IHQGEDYITIKERLGHGSVKTTIDVYGHLYPNKQKEMADKLDDLL 368 >UniRef50_A8MGA1 Integrase family protein n=7 Tax=Clostridiaceae RepID=A8MGA1_ALKOO Length = 380 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 84/418 (20%), Positives = 143/418 (34%), Gaps = 56/418 (13%) Query: 7 GVEIRGRYIRIWFM---FRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 GV RG ++ GKR + KG K+A N + ++ SG E Sbjct: 4 GVRKRGSSWYYYYDAGSVDGKRNKIERKG----GKTKKEALNALNEALTKLGSGYVE--- 56 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTT-NTMKKTKSQLKTLRIIICESTP 122 T E W + E NT + K Sbjct: 57 --------------PKKITVHEYMTDWVENYIKENRKLNTYNRYKEIYNRHLKPYIGHLG 102 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 +S ++ + +++L GE KKG + T+ N L S A + + Sbjct: 103 LSEVKPIHL----DQMLLGEK---------KKGLSGSTLQNIYGTLNSAFNRAVKLQIMY 149 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLW------KFAVYSGLRHGELA 236 P + + +R++ L+ E L ++ N + K + GLR GELA Sbjct: 150 DNPLRFIDRPKRDKFVASTLAVEEIGQLFDALDTSKYNDYIMSLGLKIVLELGLRRGELA 209 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 L W+ +D K I+ + NL PKT+ R + + + ++ LK+ L Sbjct: 210 GLEWKYIDFNKQIITIANNLVDTYTEVSLTTPKTD-ERRDLYVSKGLMQLLKQHKVLQTK 268 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR-R 352 +R Y ++ + + V + Y + ++N +K+ R Sbjct: 269 NRMKYRPHY-------KENEFNGNVCDFVMTWEDGTYVHPNYYTVKFNKLLKKVNFDRNI 321 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RHT A LL G + I +++GH IY +M + L L Sbjct: 322 RFHDLRHTNATLLLQQGIDFKVIQTRLGHSDINTTLNIYSHVNVEMQKKATEKLIEIL 379 >UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDT0_9CLOT Length = 462 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 110/282 (39%), Gaps = 21/282 (7%) Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 E H + L P +G +T++++ LL S+L A Q I + P + VK + R Sbjct: 186 EAFHIKLQELFTPVDADRGLAAKTINSHHRLLSSMLNTAVQWQIIFSNPCDRVKPPKLER 245 Query: 197 IKPDPLSKTEFNAL---MESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 + L + + L ++ E Q Q + +Y+G+R GEL L W D D+E ++ ++ Sbjct: 246 KEARYLDEKQTAQLITCLQREPEQYQTMVLLLIYTGMRRGELCGLEWPDFDMEHKLLYIQ 305 Query: 254 RNLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 R L G KT + R + L A++ L + R + Sbjct: 306 RESLYLPDRGIFEDTTKTYSSTRVIKLSDEAVKLLIQHKFAQNAERAKLGDAW------- 358 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 V ++ +L ++ V++ + + + RHT A L+ G Sbjct: 359 -------VDTGKIFTTCTGKPIHPDTLTTWFHKFVQKNDLPPVSVHSLRHTNATLLIANG 411 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 N +A ++GH ++Y I ++ + L+ Sbjct: 412 VNLTTVAGRLGHADTGTTTKVYAHAIKTADEMAAETIQNILN 453 >UniRef50_B2UXR9 Phage integrase n=3 Tax=Clostridium RepID=B2UXR9_CLOBA Length = 389 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 76/352 (21%), Positives = 134/352 (38%), Gaps = 49/352 (13%) Query: 82 TFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIII-CESTPISHIRYSDILNYRNELL 139 +FG W IK E+ +T K ++ + I + DI Y N L+ Sbjct: 61 SFGVFFSEWLFDIKFMEIKPSTKIKYETVYRNHIKNSEISDIKIKELTSKDIQIYYNNLI 120 Query: 140 HGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP 199 KKG++ V L+ +++AY + FI + + Sbjct: 121 -------------KKGKSTTLVKTIHKLIAPCIKYAYNNDFIIKDFTGSLIIPKETEKDK 167 Query: 200 -------DPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVN 251 P + E +++ KG + + L+ A+ SGLR GEL AL W D++L++ +N Sbjct: 168 LNKESSVIPFTLEEQKEFIKAIKGNKFEALFITALNSGLREGELLALTWNDINLKEKYIN 227 Query: 252 VRRNLTILDMFG------------PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 V +NL ++ PKT G R V++ + LKE K +R Sbjct: 228 VNKNLGVVTEVSKDGRGVSKLEVQTPKTRKGKRQVSIPNFLITVLKEYKKQQSKNRLKLA 287 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 Y + +F N Y + + ++ +K + I+ R + RH Sbjct: 288 NKYTN---------NNLIFCDEYGN-----YLNRDKVTYQYKKLLKESKIKTRKFHDLRH 333 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 T+A L G + +GH + Y +DDM ++ ++ L+ + Sbjct: 334 TYATRLFELGEQARTVQELLGHSDVSVTLNTYTHVLDDMKEKAVSKLDNLFN 385 >UniRef50_C5CAV2 Site-specific recombinase, integrase family n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CAV2_MICLC Length = 396 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 71/352 (20%), Positives = 121/352 (34%), Gaps = 41/352 (11%) Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 A++ + + T E + + + T T+ +++ + P+ I + Sbjct: 61 AQVDSAPGMPTLAEFFPRYIEHRGLRCTPGTLAGYEAEAARTFLPRLGELPVDMIDRRTV 120 Query: 132 LNYRNELLHGETLYLDNPRSNKKGR------------TVRTVDNYIALLCSLLRFAYQSG 179 + L T + + +TV N ALL ++L A Q G Sbjct: 121 AEWIRWQLQQPTARWRAAAARAAAATPPRPEPPLATVSPKTVRNAHALLSAVLGLAVQEG 180 Query: 180 FISTKPFEGVKKLQRNRIKPD-PLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAAL 238 + P G + + S+ E+ + Q L + +G R GE AL Sbjct: 181 ILPANPARGADLPDDDVEEERGIFSRAEWARFYAAISESYQPLLIVLLVTGARWGEATAL 240 Query: 239 AWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 D+D+ +++VRR + G PKT G RT+ L A+E L+ Sbjct: 241 QVRDLDVAASVIHVRRAWKKGKEGAVLGVPKTARGRRTIMLPDWAVETLEPLAAGRAAD- 299 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRRNP 354 F G + +FV W A+ AGI + P Sbjct: 300 ----EFLLTAPGGGVIHRTNFV-------------------ERHWKPALAAAGIAKHLTP 336 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 + RHTFA W L G + ++GHE+ Q +Y + D + + Sbjct: 337 HSLRHTFASWALMDGVPAQVVQHRLGHESLQTTSRVYAHLLLDAQRAAVDAI 388 >UniRef50_Q88UJ5 Prophage Lp3 protein 1, integrase n=1 Tax=Lactobacillus plantarum RepID=Q88UJ5_LACPL Length = 385 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 64/352 (18%), Positives = 121/352 (34%), Gaps = 43/352 (12%) Query: 75 VTTRVIKT-FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 + T+ T F ++ +W + + +T T+ + + I I+ I D Sbjct: 61 LPTKNDNTIFKDIYQLWFTQYKQTVKESTWVTTQRLFRLHILPIFSDYRIAKISIKDCQK 120 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV---- 189 N+ + T+ NY+A +L +A IS P + V Sbjct: 121 AINQWFNAGLAKYH------------TLMNYVA---KVLDYAINIDLISENPAKRVIVPV 165 Query: 190 -KKLQRNRIKPDPLSKTEFNALMESEKGQSQN-----LWKFAVYSGLRHGELAALAWEDV 243 K + + + K E E ++ A ++G+R E+ L W D+ Sbjct: 166 NKNDRSRKNLENYFDKAELQHFFECLTDDDNTPQASVFFRLAAFTGMRKSEMLCLEWSDI 225 Query: 244 DLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 D + V + + D + PKT RTV L ++ L+ H + + Sbjct: 226 DFSNHTIRVNKTQSRGDGARLLVQAPKTARSNRTVYLDPTTIKILQ--------HWQVDQ 277 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 + +G Q H+VF + + S + + ++ + RH Sbjct: 278 KKWLLRFGFNINQGNHYVFAN-----ENNEMFQPSKPRKWLEHTLTKYDLKHVTVHAFRH 332 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 T+A A A+ + Q+GH + + +IY +E L L+ Sbjct: 333 TYATLAFEAHASIKSVQDQLGHSSYRTTLDIYTAVTAKQKNEATEKLANYLN 384 >UniRef50_A1SI41 Phage integrase family protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SI41_NOCSJ Length = 403 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 69/350 (19%), Positives = 120/350 (34%), Gaps = 35/350 (10%) Query: 77 TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 T E D W E L +T K + +++ S + + S Sbjct: 62 APQDITVAEWLDRWMDGHEVTLKPSTAKTYRDKIRLYLKPKLGSARLQSLSPS------- 114 Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN- 195 L + + + RTV+ A+L + ++ A I P +G K +R+ Sbjct: 115 GLTVVWRDLQASGGRSGAPLSRRTVEFARAVLHAAMQDAVVERIIQVNPVDGSKMAKRDG 174 Query: 196 RIKPDPLSKTEFNALM-ESEKGQSQNLWKFAVYSGLRHGELAALAWED-----VDLEKGI 249 + K + + + + + + +W +G+R GE+A L W D VDL+ G Sbjct: 175 KPKHTTWTAAQVASFLTATTSDRWHPMWAVFASTGMRRGEVAGLRWSDSHGPIVDLDGGT 234 Query: 250 VNVRRNLTILD--MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG 307 + V + T LD N RT+ + + L+ R + Y G Sbjct: 235 IRVEVSTTQLDNRRVTTTPKNHERRTIAIDPDLVTVLRTWKATQAAERLAFGPGYADAEG 294 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG-----------IRRRNPYH 356 VF Y S + L A+ AG + R + Sbjct: 295 I--------VFTWEDGRPVMPDYISKTFLTAQTKLKELAAGPGDDAPATIVPLPRLVLHG 346 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 RHT A LL +G +A ++GH+ + + Y I D + + + Sbjct: 347 LRHTHATILLRSGVPVHVVARRLGHKDPSVTLDTYADVIPDDDSSAVDVF 396 >UniRef50_C9XJT1 Integrase n=6 Tax=Clostridium difficile RepID=C9XJT1_CLODC Length = 380 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 124/366 (33%), Gaps = 39/366 (10%) Query: 55 NSGEFEYLRRFPQSSTGAKMVT------TRVIKTFGELCDIWTKIKETELTTNTMKKTKS 108 N G F+ R + K T E + ++ T S Sbjct: 40 NMGTFDKKREASKRLNEVKESLYNDGFLVPSEITVSEFLLDFLNKYSENISLATYNNYVS 99 Query: 109 QLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALL 168 K I + I NY ++L + +++ +I +L Sbjct: 100 ICKNYINPSIGKYKIQDLHPVHIQNYIDKLSY--------------KLNPQSIKIHINIL 145 Query: 169 CSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVY 227 ++ AY+ I + ++ + + K + + + L++ K L A+ Sbjct: 146 KLAIKRAYRLKLIKENVMDSIEAPRYKKFKNEIYDREQMIKLLDLAKNTEMELPINLAIG 205 Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEAL 284 GLR E+ L W+++D E+ + V + + ++ + PKT + +R ++ + + L Sbjct: 206 LGLRISEVLGLTWDNIDFEENTITVNKITSRINGSVILKEPKTESSVRKISSPKELMSLL 265 Query: 285 KEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAV 344 KE Y + + + + K+ + + ++ + Sbjct: 266 KE---------------YKIKQNKNLLKSSIRNNNNLLFFNKKCEPIAEDVMSKKFKRFL 310 Query: 345 KRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIA 404 ++ + + RH+ L+ + I+ ++GH +Y + +M+ E Sbjct: 311 EKNELPHIRFHDLRHSHVTLLINSKVPIKVISERVGHSNISTTLSVYSHVLKEMDKEASD 370 Query: 405 MLNARL 410 ++ L Sbjct: 371 KISESL 376 >UniRef50_A7VVX9 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VVX9_9CLOT Length = 419 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 131/334 (39%), Gaps = 21/334 (6%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 TF E + W KIK+ +++ K + +L+ + I PIS I+ +++ N +L Sbjct: 90 TFKEWGNHWLKIKKAIVSSAHYKTCEQKLRIINCYI-GDMPISQIKTANVQNIIFDL--- 145 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN-RIKPD 200 R K RT+ Y ++ + + A ++ I P VK + + + Sbjct: 146 ----SSLNRWTGKPTAKRTLVEYRSVCRQVFQLAIENRIIDYNPASSVKIVSNQLKKERR 201 Query: 201 PLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL---- 256 LS E ++ + ++Q +++GLR GE+ L W D+D E G + V +++ Sbjct: 202 ALSVEEQGWIINT-PHRAQKAAMIMMFAGLRRGEVIPLTWNDIDFEAGTIRVNKSVFKEG 260 Query: 257 TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 T ++ KT +G R V + Q ++ LK Q K T E Sbjct: 261 TRFNIKSGAKTESGNRVVNIPQILIDFLKLQPKDTILVCPDTKDVMMTETSWRRMWD--- 317 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 Y ++ ++++ I R P+ RHTF L +G + Sbjct: 318 ----SYIKDLNIKYGDLNGKRSKYDPKGVPITIPRITPHWLRHTFCTLLYLSGTDVLTAK 373 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 QMGH + IY + ++ LN + Sbjct: 374 EQMGHSDIKTTLGIYTHLDKEHKRNAVSKLNEYI 407 >UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCF9_THET1 Length = 357 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 124/350 (35%), Gaps = 48/350 (13%) Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 + + T + W +++ EL +T + ++ + + Sbjct: 48 EAAAEHRLVPPNKLTLEQYLAEWLEVRSRELRVSTRVNYQRLIEQHICPALGGRRLQALA 107 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 ++ + L R R ALL L A + G ++T P + Sbjct: 108 ALELSRWLAGLGE---------------RLPRRAQEAYALLHKALADAVRLGLLATNPLD 152 Query: 188 GVKKLQRNRIKPDPLSKTEFNALMESEK----GQSQNLWKFAVYSGLRHGELAALAWEDV 243 V+ + R +P ++ + L+ + + G L F + SG R GE L W DV Sbjct: 153 RVEPPKHQRRRPTLPARDQIALLIAALEAGKAGWYSELLLFLLGSGCRIGEALGLEWGDV 212 Query: 244 DLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 D ++G V + R L + PPK+ AG R + L ALEAL++Q Sbjct: 213 DWQEGSVRISRQLLEVGGEVHESPPKSRAGERVIALPAFALEALRQQRA----------- 261 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 K+ + F+ + ++ +A G+ R + RH Sbjct: 262 ----------KKLGKYCFLSSTGTTPCR-----RNVLRALHAVCAELGLPRLRIHDLRHV 306 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A L AG P S++GH + + ++Y +D + E L L Sbjct: 307 HASLLAHAGVPPKVAQSRLGHSSPMVTLQVYQHVLDGADREAALRLERVL 356 >UniRef50_B0MMM2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMM2_9FIRM Length = 398 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 132/386 (34%), Gaps = 46/386 (11%) Query: 38 SNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE 97 +N K +V Y + Q+ A + + + K E Sbjct: 43 ANKSKVNKAYREVVQAFEQ---SYAEQIAQNKKPASDIPIY------DYMCAYYKKIEKN 93 Query: 98 LTTNTMKKTKSQLKTLRIIIC---ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKK 154 + +T + + + + + I DI ++ + + + Sbjct: 94 IQKSTAESYRGMINGRIRRYFTARKDLTVGSITAKDIEDFYDWMFESHVV---------- 143 Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE 214 TV +Y +L S + A++ G I + PF+ + + ++N+ D S+ E A++ Sbjct: 144 ---ANTVIHYHTVLHSAFKRAFKDGLIESNPFDRIDRPKKNKFTGDNYSEEELIAMLGLI 200 Query: 215 KGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIV----NVRRNLTILDMFGPP---- 265 +G A GLR E W VD EK + + + P Sbjct: 201 RGDIIYPAVMLAGGLGLRRSEALGARWSRVDWEKKTILLDTKIIEYKENGKVIVEPVEEM 260 Query: 266 KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNG 325 K + RT+ L P E L E+ + +R+ Y+R+Y +C Sbjct: 261 KNKSSRRTLPLPDPVYEMLCEEREKQDLYRRMFKGSYNRKY------------DDYICVD 308 Query: 326 KQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQ 385 + + + R+ +++ G+R+ + RHTFA L+ +++ +GH Sbjct: 309 QLGGLIRPNRVTQRFADLIRQYGLRKIRFHDLRHTFASILINQDVPLLNVSTFLGHSDLS 368 Query: 386 MVYEIYGMWIDDMNDEQIAMLNARLS 411 IY E +++ + Sbjct: 369 TTANIYAHLDKSKKQESADVISNIFN 394 >UniRef50_C5UUP0 Phage integrase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUP0_CLOBO Length = 391 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 71/349 (20%), Positives = 129/349 (36%), Gaps = 50/349 (14%) Query: 83 FGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIII-CESTPISHIRYSDILNYRNELLH 140 F W + L +T + ++ + I I DI Y N + Sbjct: 62 FETFFSDWLFDVHFMGLKPSTQMRYETIYRNHIKNSELSDIKIKEITSKDIQTYYNNKI- 120 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR------ 194 K+G +V V + ++ +R+AY + FI + + Sbjct: 121 ------------KRGCSVTLVKSIHKIITPCIRYAYNNNFIIKNFTSALILPKETEKDKL 168 Query: 195 -NRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 + P + E + +G + + ++ A+ SGLR GEL AL W+D++ + +NV Sbjct: 169 NKKSSVIPFTLEEQKKFISVIRGNKFEMIFLTALNSGLREGELLALTWKDINFKDKYINV 228 Query: 253 RRNLTILDMFG-------------PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 +NL+++ PKT GIR V++ ALK+ K +R Sbjct: 229 NKNLSVVTEISKENGRGGSTLEVQTPKTKKGIRKVSIPSFLATALKQYKKQQIKNRLKMN 288 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 FY + VF + N Y + + R+ ++ ++ + RH Sbjct: 289 QFY---------NDNNLVFCDELGN-----YLNRDKIVYRFKKVLEDNKMKEIKFHDLRH 334 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 T+A L G + + S +GH + + Y +D M + + LN Sbjct: 335 TYATRLFELGESAKTVQSFLGHSDISVTLDTYTHVLDSMKETTASKLND 383 >UniRef50_C2KIC3 Bacteriophage integrase n=2 Tax=Leuconostoc mesenteroides subsp. cremoris ATCC 19254 RepID=C2KIC3_LEUMC Length = 375 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 122/358 (34%), Gaps = 54/358 (15%) Query: 65 FPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPIS 124 F + TT + T EL D+W + + + +T+ KT + I T ++ Sbjct: 53 FSNGQSKYNKKTTPNVMTVKELYDMWLETYQHTVEESTLNKTMNVFNVHIIPAWGDTHVT 112 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTK 184 I+ D+ Y N + Y L LL A + I Sbjct: 113 DIKPLDLQRYINTMQGKILHY----------------RKITGYLRRLLNIAVRMDMIPVD 156 Query: 185 PFEGVKKLQRNR---IKPDPLSKTEFNALMESEKGQS-------QNLWKFAVYSGLRHGE 234 PF ++ + R + + EF A +E Q L + +G+R E Sbjct: 157 PFTKIEMPKERRQVNKRKQFMDVDEFKAFLEVLDSQYKYINQQAYTLLRLGALTGMRTEE 216 Query: 235 LAALAWEDVDLEKGIVNVRRNLTIL----DMFGPPKTNAGIRTVTLLQPALEALKEQYKL 290 L AL WE VD G +++ + L PK+ RT+ + L L + Y++ Sbjct: 217 LLALQWEQVDFNGGYISIVQALGRGFNGGTYIKAPKSQTSKRTLKIDNKMLAVLSDWYEV 276 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 + ++ + F Q V + + G+ Sbjct: 277 SHYNSNDDFVF-----------------------NNQGKTLQVMRPNKWLHDVSDKYGVA 313 Query: 351 -RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 + + RHT+A L GA+ + + +GH M ++Y +DE +L+ Sbjct: 314 VGLSMHKLRHTWATLALDQGASVKQVQTYLGHADVSMTLDVYSDITKRASDETGNILS 371 >UniRef50_C1B977 Putative integrase n=2 Tax=Nocardiaceae RepID=C1B977_RHOOB Length = 368 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 79/334 (23%), Positives = 136/334 (40%), Gaps = 44/334 (13%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T GE+ W + KE++L + + ++ + + +S + + + +L Sbjct: 63 TMGEVGPAWLERKESDLKPSAYRSLETSWRVHVKPRWGTVRLSDVDLDAVERWIADL--- 119 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD- 200 + KG TV V +L +L A + ++ P GV+ L R + KP Sbjct: 120 ---------NRTKGATV--VIRAYGVLAGILDSAVKGKRLARNPARGVENLPRKQRKPRV 168 Query: 201 PLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 L+ E AL +S G+ + L Y GLR GE L +DL + V N ++ Sbjct: 169 YLTHDEVAALADSA-GEKRALVLVLAYCGLRWGEAIGLRVRHLDLLRKRATVVENAVQVN 227 Query: 261 M---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 M G PK++ R+V + +E L Q + G + ++ F R+ G K+ + F Sbjct: 228 MEMHVGTPKSHKS-RSVPIPGFVVEELARQCEGKG---RDDLVFPGRD-GDYLKRSVSF- 281 Query: 318 FMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 + AV+++G+ R P+ RHT A + AGAN + Sbjct: 282 -------------------TGWFTKAVEKSGVPRLTPHDLRHTCASLSIAAGANVKSLQR 322 Query: 378 QMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 +GH +A M + Y +D D L+ +S Sbjct: 323 MLGHASAAMTLDTYSDLFEDDLDAVGDALDQAVS 356 >UniRef50_UPI0001BCCDB9 integrase family protein n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCCDB9 Length = 344 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 124/337 (36%), Gaps = 46/337 (13%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F E D + K + T K+ + + P++ I S + + N + Sbjct: 39 FKEYGDKYMNDKSRTVAKTTHSKSACLYRVQLLPAFGEQPLAAITRSQVQGFVNAMADH- 97 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 ++ T+ LL S++ A I P + VK + K Sbjct: 98 ------------PYSMETIKATKCLLSSIMALAASDQLIPVNPCKAVKLPKVEPNKKRAP 145 Query: 203 SKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM 261 S EF LM++ +G + +GLR GE+ AL WED+D+++ +++V + ++ + Sbjct: 146 SMEEFKRLMKASEGHRLWIAIPLLFLAGLRLGEMLALTWEDIDMKERLIHVSKTWSVENG 205 Query: 262 FGP------PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLH 315 G PKT AG R++ + LK G + + Sbjct: 206 SGKAYLKDSPKTKAGRRSIPIGDDLYTMLKRYRTNEGKGK-------------------N 246 Query: 316 FVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR-RNPYHTRHTFACWLLTAGANPAF 374 V R + P + W A + + P+ RH FA L AG NP Sbjct: 247 VVIPKRDADEYTHPQVFRGKVFKYW---CYDADLPKDITPHSGRHYFAYHLYAAGVNPET 303 Query: 375 IASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + GH + ++Y D ++DE M+ AR S Sbjct: 304 LRHITGHSDITTLLDVYCH-TDKLSDET--MIQARNS 337 >UniRef50_A0JQA1 Phage integrase n=2 Tax=Lactobacillales RepID=A0JQA1_LACS1 Length = 381 Score = 211 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 66/377 (17%), Positives = 131/377 (34%), Gaps = 56/377 (14%) Query: 41 KKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTT 100 K+A I +I++ F TFGE+ D W + + Sbjct: 42 KEAKLAADEIEKKISNPTF----------------LDNENITFGEVYDRWIVNYKLTVKE 85 Query: 101 NTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRT 160 ++ + Q K+ + I + I+ I + + N + P N K Sbjct: 86 SSFYTVELQYKSKILPILGNKKINQITTIECQDLIN-------YWYSIPLKNYKA----- 133 Query: 161 VDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI------KPDPLSKTEFNALME-- 212 L+ + ++A Q ++ P V + +R + ++ E +E Sbjct: 134 ---IFNLITRIFKYAKQLKIVTDDPTSSVIIPKASRQFNNLEHSRNYYTRDELKTFLEYA 190 Query: 213 --SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG--PPKTN 268 EK + L++ +SG+R E AL W D+D EK + + + + ++ PKT Sbjct: 191 EKHEKHKIYVLFRLLAFSGMRKSEALALTWNDIDFEKAQITINKTIILVSKVKVTTPKTK 250 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 + RTV + + + L+E + G VF K Sbjct: 251 SSNRTVFIDKKTVSILREWRLSQKKE--------LLQKGFNALSPNQLVFPD-----KNN 297 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 Y +++ N + + + + RHT+A G + + +Q+GH ++ Sbjct: 298 HYIIPTTISKMMNRVSEGSNLHHITVHGLRHTYATLAAQGGMSVKQLQAQLGHSKVEITL 357 Query: 389 EIYGMWIDDMNDEQIAM 405 ++Y D+ + Sbjct: 358 DVYTSITDEQRKDTANQ 374 >UniRef50_Q831G3 Site-specific recombinase, phage integrase family n=1 Tax=Enterococcus faecalis RepID=Q831G3_ENTFA Length = 379 Score = 211 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 62/378 (16%), Positives = 136/378 (35%), Gaps = 34/378 (8%) Query: 38 SNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE 97 S ++ L E E +YLR + ++ +TT T ++ +++ + Sbjct: 21 SGKQRRKRLTVSTKKEAQQIESKYLRLYHENK-----LTTNSDLTLKDIYEVYEEKYTQN 75 Query: 98 LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRT 157 L + + + K ++T I I+ I +++ LL + K+ + Sbjct: 76 LKPSYKQTQERIFKNYIEPYFKNTQIKLIKKQQIYDFQQFLLTSKP-------KRKETLS 128 Query: 158 VRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE--- 214 +T++ I L L A + G P + KL+ + + D + EF + Sbjct: 129 NKTINMIIIHLQKLFNVAMKEGLSYENPCNQIDKLKVQKKEIDFWTLDEFTTFISHIDKN 188 Query: 215 KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGI 271 K + ++FA ++G+R GE+ AL W D+D V + ++ +++ + PKT + Sbjct: 189 KPFLKVFYQFAFFTGMRAGEMIALTWSDIDFYNQTVRINKSAKLINGNYVTTTPKTESSN 248 Query: 272 RTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYY 331 R +T+ LK+ ++ + + VF + + Sbjct: 249 RYITINSKITAMLKKWQEIQPK--------LLIDNFQNIDSDKLLVFQYS------EKHP 294 Query: 332 SVSSLGARWNAAVKR--AGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYE 389 S + + + ++ + RH+ L+ I ++GH + + Sbjct: 295 SSDYYSKQIKKIIVKNNLNLKPIRLHDFRHSHVALLIHNNEKNTTIKERLGHSSITTTID 354 Query: 390 IYGMWIDDMNDEQIAMLN 407 YG + + Sbjct: 355 TYGHLYPNSQKSMSDKFD 372 >UniRef50_C2YK72 Phage integrase n=3 Tax=Bacillus cereus group RepID=C2YK72_BACCE Length = 387 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 77/411 (18%), Positives = 136/411 (33%), Gaps = 64/411 (15%) Query: 16 RIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMV 75 RI + GK +ET KG T + A A + ++ +G Sbjct: 14 RIRYKEMGK-YKETSKGGFKTKKEAQLAA---AKVEEKLATGG----------------N 53 Query: 76 TTRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNY 134 TF E W K+ + T + ++ + + + + Sbjct: 54 LKDSKITFNEYLYEWLNTYKKGNVAPRTYMVYEKNIRLHILPAFGELRLKDLTRIKYQKF 113 Query: 135 RNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS-GFISTKPFEGVK--- 190 N L+ + + +TV+ + L A G + P +K Sbjct: 114 INGLM--------------EKYSKKTVETINVTMHHALDIAVNELGILEKNPTSKIKLRT 159 Query: 191 -KLQRNRIKPDPLSKTEFNALMESEKG-----QSQNLWKFAVYSGLRHGELAALAWEDVD 244 ++ + E + + +L+ F +GLR GE AL WEDVD Sbjct: 160 TRVTSKDDEIKCYDIDELQQFLNYVLKEKGGFKYFSLFMFLSRTGLRIGECLALQWEDVD 219 Query: 245 LEKGIVNVRRNLTILDM-----FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 E+ + + + L FGPPK + RT++L + LK+ Sbjct: 220 FEEQKLFINKTLINTKRSEKILFGPPKNKSSKRTISLDPSTISHLKKMKIEQNKQVLKNG 279 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 +Y + +FVF + P S A K+ + + RH Sbjct: 280 KYY---------KDYNFVFTHEDNSCMLHP-----SSLKFLLEASKKGNFKYITLHGFRH 325 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 T A LL +GAN +++ ++GH + M +Y M + + + L Sbjct: 326 THAVHLLQSGANIKYVSERLGHSSIDMTANVYLHITKSMEETAVNQYDEFL 376 >UniRef50_C2F0I9 Transposon integrase n=3 Tax=Firmicutes RepID=C2F0I9_LACRE Length = 410 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 73/365 (20%), Positives = 133/365 (36%), Gaps = 60/365 (16%) Query: 81 KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 T ++ DIW +K+ L +NT K I ++ +DI + N+L+ Sbjct: 69 MTLNDVYDIWEGLKKG-LKSNTFNNYKYMYNHFVRNDLGQYKIRTLKVTDIRRFYNKLVD 127 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE-GVKKLQRNR--- 196 +G V ++D ++ +L A Q + + G+++L+R R Sbjct: 128 V------------RGLKVSSLDTIQLIIHQVLDLAVQDDLVRKNVSDNGLRELKRMRGID 175 Query: 197 -IKPDPLSKTEFNALMESEKG-----QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 I L+ + N + + + + +GLR GEL L WED+D + ++ Sbjct: 176 SIPRKSLTIEQQNLFLNYLQNTDKYKHWYPTFAVMLGTGLRVGELTGLRWEDIDFKNNLI 235 Query: 251 NVRRNLTILDM---------FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 V L + PKT AG RT+ +++ EAL++Q + + Sbjct: 236 KVNHTLVFYERSKSSKTGFGINTPKTKAGFRTIPMIKTVREALQKQQTYLQKEQIRSVD- 294 Query: 302 YHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG------------- 348 F+F+ R + + + L ++ Sbjct: 295 -------NIDGFRDFIFLNRFGHVQNQGP-----LNKALKRIIRDCNFAELDKNPSINND 342 Query: 349 --IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 + + + RHTF L+ +G N I + +GH Q IY DM ++Q L Sbjct: 343 CLLPNFSCHVLRHTFTTRLVESGMNVKVIQNVLGHSDIQTTLNIYADVTRDMKNQQFNQL 402 Query: 407 NARLS 411 +S Sbjct: 403 EDFIS 407 >UniRef50_UPI0001BCC5A1 phage integrase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCC5A1 Length = 416 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 81/403 (20%), Positives = 141/403 (34%), Gaps = 68/403 (16%) Query: 20 MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRV 79 +R K RE K + A ++ GE+ Sbjct: 18 RYRDKAGRERTKTFPTKGE----ARTWADEQERKVRRGEWV--------------DPEMS 59 Query: 80 IKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELL 139 T E + W + TM+ +S L+ + + + + +D+ + + Sbjct: 60 RITVSEWAETWLAT--LVVKPKTMESYESLLRCHVLPRWGAVRLESVALADVKAWVAGM- 116 Query: 140 HGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTK---PFEG-----VKK 191 + N + + +L +L A + G ++ P G V Sbjct: 117 ---------RQQNGRPLSASRTKQAYQVLTMMLDLAVEDGRLARNSAKPASGRSRSMVPP 167 Query: 192 LQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVN 251 +QR+R K L+ + AL + G + L Y+GLR GE +AL DVDL ++ Sbjct: 168 VQRDRAK-KYLTPRQLEALAGAA-GDGRVLILTLGYTGLRWGEASALRVSDVDLLGRRIH 225 Query: 252 VRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 VRR+++ + +FG K++A RTV + + L+ G Sbjct: 226 VRRSISEVRGSLVFGTTKSHA-TRTVPITKSLAVELEALIDGRGPD-------------- 270 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTA 368 P + + ++ AV RAG+ P+ RHT A ++A Sbjct: 271 ----------DPLFAAPGGGWLHLRNFRRRDFDPAVARAGLPHITPHGLRHTAASIAVSA 320 Query: 369 GANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 GAN + +GH +A M ++Y D+ D L S Sbjct: 321 GANVKAVQKMLGHASAAMTLDVYADLFDEDMDALAERLETTAS 363 >UniRef50_D1VST0 Phage integrase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VST0_9FIRM Length = 360 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 69/357 (19%), Positives = 141/357 (39%), Gaps = 47/357 (13%) Query: 60 EYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 EY R F + F L ++ + + + +T+ + + + + Sbjct: 42 EYERNFLNNIK------FNPEMNFKSLYKMYLEDMKPRIKEHTLASKEYITENKILPYFK 95 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 IS I ++ ++N LL + + P + ++T++N + ++ +A + Sbjct: 96 DMKISGIGSIEVQRWQNLLLQAKNPKTNKPYA---PTYLKTINNQLT---AIFNYAVKFH 149 Query: 180 FISTKPFEGVKKL-QRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAA 237 + P V + ++N + + S EFN + + ++ +L + +SG R GEL A Sbjct: 150 NLKNNPVHKVGTIGEKNAPEKEIWSIEEFNEFINLVEDKTLHLGFNILYWSGCRIGELLA 209 Query: 238 LAWEDVDLEKGIVNVRRNLTIL---DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 L W D+D + I+N+ ++ L D+ PKT IR +T++ ++ ++ KL Sbjct: 210 LTWNDIDFKNNIINIDKSYQRLNCKDVITEPKTKKSIRKITVVSDVIKEIESYKKLFYKP 269 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 + F ++ F + N KR ++R Sbjct: 270 GDDDRIFNCTKHK----------FEHAIIN------------------ICKRNNLKRIRI 301 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + RH+ A LL G N ++ ++GHE Y I +++I + +LS Sbjct: 302 HDLRHSHASLLLNEGINIVALSKRLGHEKVSTTLNTYSHMIPS--EDKILNVMEKLS 356 >UniRef50_Q0RPW7 Integrase n=1 Tax=Frankia alni ACN14a RepID=Q0RPW7_FRAAA Length = 405 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 67/338 (19%), Positives = 115/338 (34%), Gaps = 48/338 (14%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T W + + T K + L+ + + ++ + +D+ + L Sbjct: 69 TVETWATYWLS-GLSGVRGRTAKDYERDLRNHVLPLLGGLELTAVSSTDVGQWVKGL--- 124 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG---FISTKPFEGVKKLQRNRIK 198 ++G +T+ N LL L + A P + + + + Sbjct: 125 ----------QERGLAPKTIRNQHGLLSVLFQAAVDHEPQAMRPGNPCARTRLPEASGEE 174 Query: 199 PDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDL--EKGIVNVRRNL 256 L+ E L+ + + L +GLR GE L +VDL G VR++L Sbjct: 175 MHFLTPAELERLLAALPPHYRPLVTTLALTGLRWGEATGLTARNVDLLGTPGTTAVRQSL 234 Query: 257 TILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 GPPKT RTVTL ++ L + + K+ Sbjct: 235 QRQADGSLQLGPPKTRTSRRTVTLPAKLVDVLIPVW--------------------SGKE 274 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRRNPYHTRHTFACWLLTAGAN 371 VF + W AV RAG+ + RHT A WL++AG Sbjct: 275 GDEMVFT----TQRGSLVRHSHFYNRVWRPAVLRAGLVPGLRIHDLRHTHAAWLISAGRP 330 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 I ++GH + + YG + +++ + L A Sbjct: 331 LPSIQRRLGHRSITTTIDRYGHLLPEVDRGDLDALQAA 368 >UniRef50_C4RQL8 Integrase n=2 Tax=root RepID=C4RQL8_9ACTO Length = 395 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 124/349 (35%), Gaps = 32/349 (9%) Query: 70 TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYS 129 G ++ T + W E L + ++++ + I + + Sbjct: 49 QGNALMPRGGQITLADFVGEWWPSYEKTLKPTAVNSEGNRIRNHLLPILGHLTLDELDGQ 108 Query: 130 DILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV 189 + N+L G + ++ R +K +T+ N LL ++ A + I P Sbjct: 109 VTQQWVNDLEAGVGPWPESTRGRRKPLAAKTISNCHGLLHTICGAAIAAKRIRLNPCSST 168 Query: 190 KKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDL--EK 247 +R + LS E L+ + + L V +GLR GE L VDL + Sbjct: 169 MLPRREPKEMKFLSDPEIGRLITALPPHWRPLVMLLVATGLRWGEAIGLRAGRVDLLAAR 228 Query: 248 GIVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 + V L L +F PKT G RTV+ L L + E+ F Sbjct: 229 PRLTVVEQLQELASTGELVFQSPKTAKGRRTVSFTTKVALLL---TPLIAGKKSDEVVFT 285 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 + G + W A + AG+ + RHT A Sbjct: 286 APKGGMVR----------------------TRNFRRIWVKACEEAGLPGLRIHDLRHTHA 323 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 L++AG + I+ ++GH + + +YG +++++ +A + ++ Sbjct: 324 AILISAGRPLSAISRRLGHSSIAVTDLLYGHLREEVDEGILAAIEEAMA 372 >UniRef50_C2VI23 Site-specific recombinase, phage integrase n=3 Tax=Bacillus cereus group RepID=C2VI23_BACCE Length = 392 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 123/345 (35%), Gaps = 34/345 (9%) Query: 71 GAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSD 130 G T E DIW + + E ++ + ++ +K + ++ + S Sbjct: 66 GEVKQVKNSNLTISEWLDIWYETHKNEWKISSCSQRENAIKYQMKPLLGKYKLAELDKST 125 Query: 131 -ILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV 189 Y NELL K TV + L + A I F + Sbjct: 126 YKRVYINELL--------------KKYKPSTVQLFHRLFKIAINAAVDDELIPRNRFNKI 171 Query: 190 KKLQRNRIKPDPLSKTEFNALMESEKGQ----SQNLWKFAVYSGLRHGELAALAWEDVDL 245 + + + E N + + K + ++ ++GLR GE L W++++ Sbjct: 172 TIPNEEKTVENFFTAEELNEFIAAAKKHENITNYSIILLLAFTGLRKGEALGLQWKNINF 231 Query: 246 EKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 E+ + V R PKT RT+ + + LK + S Sbjct: 232 EEKTLTVERTRDNKGTR-TPKTKNSFRTILIDDTLINQLKAYRTWCKKTKLSFGL----- 285 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWL 365 Q F+F+ + + + L + +K +++ P+ RHT A L Sbjct: 286 ----HLQDDDFIFISY----QSGTPITDNPLMYSFQRILKHTTLKKITPHGLRHTHATLL 337 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 ++ IA ++G T QM+++IYG ++ +E +A + L Sbjct: 338 ISQRIPVKVIADRLG-NTPQMIFDIYGHSFKELEEESVAAFSTSL 381 >UniRef50_A6NRR1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NRR1_9BACE Length = 377 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 113/354 (31%), Gaps = 32/354 (9%) Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICES 120 LR F QS ++ T + + W + + E T+ + + Sbjct: 50 LREF-QSELESRQQVAPRALTLDQWLEYWMEQVVEPNRAETTIYGYRKIIDNHLSDALGD 108 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 P+ + + Y L+ KG + TV + LL + L A + Sbjct: 109 IPVQKLTPRHLQEYYAMLMRD------------KGLSPNTVRRHHDLLSAALHTAVRQDI 156 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLW-KFAVYSGLRHGELAALA 239 I P E V+ + + E L +G L K A GLR E+ L Sbjct: 157 ILRSPTERVEPPRVVPREVGYYGPEELKKLYALAEGTGLELVVKLAGMLGLRREEICGLQ 216 Query: 240 WEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 W VD + +++ T + K + R + + + L+ + +R Sbjct: 217 WSSVDFAQRRIHICAARTAAGGEIIQKETKNRSSTRVLHMSDELVRLLRRERAGQAENRL 276 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 + + H S +++ + ++R + + + Sbjct: 277 ALGDKWEDSGLVAVDHMGH--------------PLSPNAVSLAFTRFIRRNNLPKITLHG 322 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHTFA GA I +GH T IY +D ++ + + A L Sbjct: 323 LRHTFATVASAQGAPLFDIGKALGHSTPATTGRIYTHLLDQNHEATLDRVAAAL 376 >UniRef50_C7CS77 Predicted protein n=3 Tax=Enterococcus faecalis RepID=C7CS77_ENTFA Length = 377 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 122/342 (35%), Gaps = 43/342 (12%) Query: 77 TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 + TF ++ ++W + T T+ + + + I+ + N Sbjct: 63 KQNYSTFKDVYELWYAQYVNTVKPITAGHTERMFRLHILPEFGNIKINKLTKLMCQKAVN 122 Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 + + + +K +L +A I P + V ++++ Sbjct: 123 KWSKEYSAFHLLKSITQK----------------MLHYAVAQDIIDINPMQYVVMPKKDK 166 Query: 197 ----IKPDPLSKTEFNALMESEKG----QSQNLWKFAVYSGLRHGELAALAWEDVDLEKG 248 K L +E + K Q +++ ++G+R GEL AL WED+++ Sbjct: 167 TNETKKKQFLELSELKDFLAEAKETLNFQDYLIFRVLAFTGIRKGELYALTWEDINISYK 226 Query: 249 IVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 + V + LT + + PKT A RT+ L + L K H+K E+ Y + Sbjct: 227 QLTVNKTLTRIGKEYIISTPKTKASNRTIGLDDTTVSELIVWKK----HQKQELLKYGFK 282 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWL 365 +KQ + R N P + L + ++ +P+ RHT A L Sbjct: 283 TKSNDKQ----LIFHRKNNTLHYPEHINFLLSSEMKTSL--------SPHSFRHTHASLL 330 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 +GA + ++GH +IY + I L+ Sbjct: 331 FESGATIKDVQKRLGHTNVNTTMDIYTHVTKSSERKAIDKLS 372 >UniRef50_B4AH95 DNA integration/recombination/invertion protein n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AH95_BACPU Length = 427 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 83/417 (19%), Positives = 148/417 (35%), Gaps = 51/417 (12%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 TG + G+ +R ++ R E K + + + E+NSGE+ Sbjct: 18 TGYDANGKRLR---KYKTIRI-EDHKLLKTKRKLQEYLSDQLYQFKMEVNSGEY------ 67 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTK--IKETELTT---NTMKKTKSQLKTLRIIICES 120 TF W + + + T S LK + + Sbjct: 68 ----------IEPEKLTFESFIYKWKEKKLYQKSGKPYSLTTSDVYWSLLKNHILPVFGH 117 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFA-YQSG 179 I I+ I+++ ++L P G RT+ + LL + + A + Sbjct: 118 MRIERIKSLHIVDFLDDLSKDGARKDGKPG----GLGERTILDIFKLLQVVFKTAAEEWK 173 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTE----FNALMESEKGQSQNLWKFAVYSGLRHGEL 235 I P +G+ + + + E L E + + + A+ GLR GE Sbjct: 174 IIKIDPMKGLPLPVNEKKEMNYFEADEAAQCIKILYEEVDIKWRLYFLAAMIGGLRRGEG 233 Query: 236 AALAWE-DVDLEKGIVNVRRNLTIL----DMFGPPKTNAGIRTVTLLQPALEALKEQYKL 290 AL W DVD + G + R+L+ PK+ + R V + + L Y + Sbjct: 234 LALEWHLDVDWDAGGFKINRSLSKTIQGKPHVKDPKSKSSKRFVQMPDWYMNELSLYYHM 293 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 ++ + E ++F +G KPYY ++ +WN ++ I+ Sbjct: 294 WKREKEKLDDAW-------EGGDHQYIFH----SGFGKPYY-FTTPTTKWNRITQKYKIK 341 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 + RHT L+ AG + + I + GH +A+ +IYG D+M N Sbjct: 342 NIRLHDLRHTMVALLMEAGESISAIQRRAGHASARTTSDIYGHVTDEMKKSAANHFN 398 >UniRef50_C7WMG1 Integrase n=9 Tax=Enterococcus RepID=C7WMG1_ENTFA Length = 382 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 135/400 (33%), Gaps = 55/400 (13%) Query: 29 TLKGWEITNSNIKKAGN--LRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGEL 86 T G + K R +I E + + + TF E+ Sbjct: 18 TYLGTDPLTGKKKYTTKRGFRTQKEAKIALARLEMEIQ-------KNGIPSSTNITFQEV 70 Query: 87 CDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYL 146 +W + + + ++ +T+ + + IS I + N Sbjct: 71 AFMWLENYKNTVKESSYSRTEIIFRKHILPSFGKIEISKISTAYCQKIVNTW-------- 122 Query: 147 DNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN-----RIKPDP 201 + + +I + + +FA G + P V + K Sbjct: 123 ------HSKGSSKQYPLFINYMNQVFKFAINIGVTNQNPVINVIVPKNQDIITSEKKIKF 176 Query: 202 LSKTEFNALMESEK--------GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 +K + ++S + + L++ +SG R GEL AL W+D++++ G + + Sbjct: 177 YTKDQLQIFLKSIEQSESAYITIRDYTLFRLLAFSGCRIGELLALTWDDLNIKTGELQIN 236 Query: 254 RNLTILDMF---GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 + + D + PKT RT+ L + LK+ + Sbjct: 237 KTIAKSDHYYVSNTPKTKKSNRTLILDAKTITILKKWKLEQKKYLL-------------- 282 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 KL + R+ ++ + ++ R+N K+A + + RHT A L AGA Sbjct: 283 --KLGYTQPSRIFTNEENEFTINQAITDRYNIYRKKANLPNIGLHGFRHTHASLLYYAGA 340 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + + ++GH + + Y +D ++ L+ + Sbjct: 341 DHKEVQERLGHANIKTTLDTYTHLTNDGKEKTTEKLSKYI 380 >UniRef50_Q87MU5 Putative pore-forming cytotoxin integrase n=2 Tax=Vibrio RepID=Q87MU5_VIBPA Length = 370 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 92/343 (26%), Positives = 154/343 (44%), Gaps = 26/343 (7%) Query: 73 KMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDIL 132 K +TT T + D + ++ +T+ S+ K PI+ + ++ I Sbjct: 2 KTITTTKSPTVKDYIDAYLIERKYCAAPSTLASDLSRAKN-INEALGEFPINAVSHTQI- 59 Query: 133 NYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL 192 N LL N +T++ ++ +L + A + G I+ P GV+ Sbjct: 60 ---NMLLVSWHERFRN----------KTINEHLTILRRISLKAVRDGVIARNPMTGVQNF 106 Query: 193 QRNRIKPDPLSKTEFNALMESEK--GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 + +P+P +K E + E + Q QN + +GLR EL AL+W+D++ E+ ++ Sbjct: 107 KTVDPEPNPFTKKELARMHECKNVCTQGQNAVMLNLLTGLRISELIALSWQDINWEREVL 166 Query: 251 NVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 VRR +L+++ PKT +R V L AL+ LKEQ KLTG R I + Sbjct: 167 YVRRA-CVLNIYKCPKTKGSVREVDLNPLALKLLKEQLKLTGKRRPQTINILECDNKTFT 225 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARW-NAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 K + F+F+ N +P+ R+ +++AG+ R RHTFA LT G Sbjct: 226 KDSVSFIFLNTKTN---QPFTDAKEFTERFFIKFLEQAGVAHRGVGQLRHTFASQCLTTG 282 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWI----DDMNDEQIAMLNA 408 + ++A QMGH++ M+ + YG WI + E L Sbjct: 283 ISKDWLAVQMGHKSTTMIDKHYGRWIREDSPNYAREAAQHLQD 325 >UniRef50_C0C1S7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1S7_9CLOT Length = 384 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 126/335 (37%), Gaps = 40/335 (11%) Query: 80 IKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELL 139 +F +L + + + L +T+ + +KT + + PI+ I I ++N + Sbjct: 75 DMSFSDLYSAYFESMKHRLRDSTLLTKDNLIKTKILPYFGNIPINQIDPGAIREWQNIMC 134 Query: 140 HGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL-QRNRIK 198 + +N K + + L ++ +A + + + P + ++ + Sbjct: 135 GQQM-------NNGKHYSSTYLKAMNNQLSTVFNYAVRYYNLPSNPCLAAGSMGKKQAGQ 187 Query: 199 PDPLSKTEFNALMES--EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN- 255 EF+ +E E + ++ Y+G+R GE+ A +++D +L+KG V VR++ Sbjct: 188 KTFWKPEEFHIFLEYFSENMEMYLIFSLLYYTGVRIGEMLAFSYDDFNLQKGTVTVRKSY 247 Query: 256 --LTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK 313 + D PPKT R + L +E L++ + L E F Sbjct: 248 RRIRKTDYITPPKTPKSFRVIALPAFLIEQLQKYFSLKEGSGMDERIFSG---------- 297 Query: 314 LHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPA 373 S + N A + +++ + RH+ A L+ G +P Sbjct: 298 -----------------ISRYHISKFMNEACENTKVKKIRIHDLRHSHASLLIELGVSPV 340 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 IA ++GHE + IY E L+ Sbjct: 341 LIAERLGHENVETTLNIYSHLYPHRQKELAESLDR 375 >UniRef50_C0QBZ6 Predicted bacteriophage P4 integrase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBZ6_DESAH Length = 386 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 82/375 (21%), Positives = 149/375 (39%), Gaps = 57/375 (15%) Query: 35 ITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK 94 T S ++ A R + E+ F +V FGE+ W ++K Sbjct: 37 DTKSVVE-ARKKRDEYLLEVKVNGFI-------QKNEVVVVNPEDGTCFGEIAVQWAELK 88 Query: 95 ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKK 154 +T+++ +T+++ + + + + I I +I ++L G Sbjct: 89 KTKVSKSTIQEYRKVMNKYILPQFGNRRIDSITGLEIEVLVSKLKCGG------------ 136 Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE 214 +T +N + ++RFA + I PF+ V ++R + PLS E +E Sbjct: 137 ----KTKNNILTPFKDVMRFAKKHKLIQHNPFDDVDSIKRESSEIHPLSLGEIKLFLEHV 192 Query: 215 KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTV 274 + L+ F ++G R GE AAL W+ VDL G++++ + + + PKT IRTV Sbjct: 193 PDYYRPLFTFLFFTGARFGEAAALKWKRVDLTNGMIHIAKTY-VRGEYKDPKTKGSIRTV 251 Query: 275 TLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVS 334 L ++AL +Q + T K FVF+ N + + S Sbjct: 252 KLSPIVIDALHQQREHTM-------------------DKSEFVFL----NTLGRHIHPHS 288 Query: 335 SLGARWNAAVKRAGI---------RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQ 385 + +++AG+ RR+ TR ++ L F+ Q+GH T + Sbjct: 289 VNLHVFRPTLEKAGLSANKSFSAATRRSCKDTRSSYITNSLDNNERMGFVQKQVGHTTTK 348 Query: 386 MVYEIYGMWIDDMND 400 M+ E Y + +D Sbjct: 349 MIVEHYYRHLPAPDD 363 >UniRef50_Q636X3 Phage integrase n=18 Tax=Bacillales RepID=Q636X3_BACCZ Length = 381 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 139/356 (39%), Gaps = 39/356 (10%) Query: 69 STGAKMVTTRVIKT-FGELCDIWTKI-KETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 + + T W K+ K+ + NT + ++ I ++ I + Sbjct: 48 KKLLNGLEVEITPTSLKHYLRDWLKLFKQDNVRKNTFILHERNIEKHIIPYFQNMNIKEL 107 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 + + N L +G + RTV + + ++ A I P Sbjct: 108 KPMMYQKFINSLTD-------------QGYSKRTVQIIHGTMNNAMKKAVSLKKIENNPC 154 Query: 187 EGVKKLQRNRIKP---DPLSKTEFNALMESEKGQSQNLWKF---AVYSGLRHGELAALAW 240 E V +N + + + +++ + + F + +G+R GE AAL W Sbjct: 155 EEVVISNKNNKEREGLKYMRSEDIPLFLKTSYQYNYIYYIFFKALLNTGMRKGEAAALQW 214 Query: 241 EDVDLEKGIVNVRRNL-----TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 +D++L++ + + + L T ++FG KT RT+ + + ++ L K ++ Sbjct: 215 KDINLKEHTITISKTLDFTAKTKEELFGDTKTFTSKRTIMIPKSLVDELLAHKKWQNANK 274 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 Y E L VF + + S+L ++ +K+A + R + Sbjct: 275 LVLQDAYEHE--------LDLVF-----SRVDGKFLPKSTLFNAFSRILKKANLPRLEIH 321 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A LL +GA+ +I ++GH++ ++ +Y D +N + I+ A ++ Sbjct: 322 SLRHTHAVLLLESGASMKYIQDRLGHKSIEITSNVYSHISDKINKDSISGFEAYMN 377 >UniRef50_C9C7Z3 Phage integrase n=2 Tax=Bacilli RepID=C9C7Z3_ENTFC Length = 344 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 123/355 (34%), Gaps = 49/355 (13%) Query: 70 TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYS 129 G + T + K F + +W + + + +T TK T + + I I Sbjct: 8 KGLQASTAQKSKKFEYVYGLWFENYKKTVKESTWSSTKQIFDTHILKVFGDKFIDKIDVF 67 Query: 130 DILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV 189 N T +P+ KK + NY ++ +A I++ P + V Sbjct: 68 FCQEAVN------TWSDSHPKIFKK------IKNYT---SNVFDYAASLQIITSNPMKLV 112 Query: 190 KKLQ-----RNRIKPDPLSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALAWE 241 + + +K E +E+ + + ++G+R GE AL W Sbjct: 113 SIPRGEALDIEDKNIEFYTKEELIEFLEAIRNDDDERYLFFSLLAFTGIRKGEAFALTWS 172 Query: 242 DVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 D+D + +N+ + +T + PK+ +G R + L + L++ Sbjct: 173 DIDFKSKTLNINKTVTRGYQGRLIVNTPKSKSGKRKIYLDNDLISLLRK----------- 221 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG--IRRRNPY 355 +Y + Q + +F Y+ + + N K +R + Sbjct: 222 ---YYTKNKTIVTIQSENLIFHH------DGLLYNPTVSRSWLNVIYKHHPELTKRITTH 272 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHT A L +GA+ + ++GH Q IY + N + I A + Sbjct: 273 GFRHTHASLLFESGASLKDVQERLGHADIQTTSNIYTHVTETQNKKVINNFVAFM 327 >UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0S2_9CLOT Length = 376 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 92/412 (22%), Positives = 151/412 (36%), Gaps = 61/412 (14%) Query: 7 GVEIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 GV RG +F GKR + SN +A + E E ++ Sbjct: 11 GVRKRGNTYHYYFDGKTIDGKRNKIEKSA---KTSNKSEALKQLEKAIEEYYMSEIDF-- 65 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 T +F E + + +L +T K +L +I + E Sbjct: 66 -------------TLSDISFAEAREKFLSEYVANDLKDSTYTNYKQKLNKPQIKVLEIYL 112 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + IR I N + + G + V N + + SL F ++ I Sbjct: 113 LKDIRAKHIQNIIDYMA-------------LNGFSKNMVKNTLRTISSLFNFCIRAELIK 159 Query: 183 TKPFEGVKKLQR--NRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALA 239 P + V + + L+ E ++ K +Y+G+R GE L Sbjct: 160 DNPCDKVVLPSKLTQPERKVALTNKEVKRILNRFKNTHWYLSLMLPLYTGMRRGECCGLR 219 Query: 240 WEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 W++VDL+KGI+ VR NLT + PKT + IRT+ + P LEALK Q + Sbjct: 220 WKNVDLDKGIIYVRENLTQDKGKKWIISTPKTKSSIRTINIPLPLLEALKWQLE------ 273 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 R + + V + +L GI+ N + Sbjct: 274 ------------RNKSNNVATNSDTHVLVRDNGSIITNDTLKYLSRVINYDLGIK-FNYH 320 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 + RHT+A L+ GAN ++ +GH + + +IY D+M D+ + +LN Sbjct: 321 NLRHTYATLLIEKGANIKDVSVLLGHASIKTTMDIYVNNTDNMRDKTLNILN 372 >UniRef50_Q98MQ9 Bacteriophage integrase n=5 Tax=Rhizobiales RepID=Q98MQ9_RHILO Length = 399 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 118/343 (34%), Gaps = 24/343 (6%) Query: 77 TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 +T E + W + + T ++ + + + +S ++ I Sbjct: 61 EPTKQTVAEFLNEWLAFVKPSVAPKTHERYTEICRKGLSPLIGNVILSKLKTDRIDAAFT 120 Query: 137 ELLHGETLYLDNPRSNKKGR---TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 L + + ++ RTV +Y +L L A +S P + Sbjct: 121 TALTAPRVDHRTKKDQREPLPPLAPRTVHHYRRVLVKALGQAVTWERLSRNPATATTPPK 180 Query: 194 RNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDL--EKGIV 250 R K + L+E+ + + AV GLR GE+ AL W ++L + + Sbjct: 181 VERQKMLAYDVGQTATLLETLRPTRMFVPVLLAVTCGLRRGEILALRWRHLELGDNRRQM 240 Query: 251 NVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG 307 ++ + + PK+ RTV L + LK + R Sbjct: 241 SIEESAEQTADGVRYKEPKS-GRARTVALSASTVAELKAHRARQAEEQ-------LRLGI 292 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLT 367 R + F+ +G+ SL W + + + R + RHT A +L+ Sbjct: 293 RPDADS----FVVAQVDGQP---LQPRSLTHEWVRVLGKTSLPRIRFHDLRHTHATQMLS 345 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 AG +P + ++GH + ++Y + M + ++ L Sbjct: 346 AGVHPKIASERLGHSNIGITLDLYSHVMPGMQADAAEQVDVAL 388 >UniRef50_C4Z3W8 Integrase/recombinase XerC n=7 Tax=Clostridiales RepID=C4Z3W8_EUBE2 Length = 400 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 71/389 (18%), Positives = 137/389 (35%), Gaps = 55/389 (14%) Query: 26 CRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGE 85 + K W N IKK G +Y R + + TFGE Sbjct: 16 VKFYCKDWTGENKQIKKRGF-------ATKREALDYERNY------KIRQENNLDMTFGE 62 Query: 86 LCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLY 145 ++T+ + + NT + + T + + ++ I D+ ++NE++ Sbjct: 63 FWKLYTEDVKNYVKLNTWLTKEHIVDTKILPYFRNLKMNEITPGDVRKWQNEMVAFR--- 119 Query: 146 LDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL-QRNRIKPDPLSK 204 N K + +L ++ A + + + P + + + + + Sbjct: 120 ----YENGKCYSQTYKKTMHNILSAIFNHACRFYNLKSNPARQAGNMGREEKKEMLFWTT 175 Query: 205 TEFNALMES--EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL--- 259 E+ E+ +K S ++ ++G+R GEL AL ED D EK V + ++ L Sbjct: 176 EEYKKFSEAVIDKPVSFYAFEMLYWTGMRLGELLALTMEDFDFEKNTVRINKSYQRLQGQ 235 Query: 260 DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM 319 D+ PKT RT+ L + E ++E + + ++ F Sbjct: 236 DVITTPKTPKSNRTIKLPKFLAEEMQEYFAMLYDQTPTDRIF------------------ 277 Query: 320 PRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 + S L K +G+++ + RH+ L+ G + IA ++ Sbjct: 278 ----------LVTKSFLHHEMERGCKLSGVKKIRIHDLRHSHISHLIDLGFSAVAIADRV 327 Query: 380 GHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 GHE+ + Y Y L+A Sbjct: 328 GHESIDITYR-YSHLFPSKQVAMADRLDA 355 >UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepID=A1UH53_MYCSK Length = 379 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 76/392 (19%), Positives = 130/392 (33%), Gaps = 55/392 (14%) Query: 27 RETLKGWEITNSN-IKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGE 85 R+++ + T + K+ +R I T Sbjct: 33 RKSVSVYAATAAECRKELKKVRDRIE--------------------GGAPAKDAPNTVSS 72 Query: 86 LCDIWTK--IKETELTTNTMKKTKSQLKTLRIII-CESTPISHIRYSDILNYRNELLHGE 142 W + ++ T + + + ++ SD+ +L Sbjct: 73 WLKQWRASSLAASDRKETTKSLYATLSRKHLEGARIGDKRLDRLKPSDVELLIVQL---- 128 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 K + TV +L L A + G ++ P VK+ R + L Sbjct: 129 ---------RGKNLSDSTVRQVYTVLRQALDVAVRDGLLAANPASKVKRPGVARKEAKYL 179 Query: 203 SKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD- 260 + L+++ KG L +GLR GE+A L W DVDLEKG + VR L+ +D Sbjct: 180 PAADVARLLDAAKGLRYYLGVVLMATTGLRRGEVAGLLWSDVDLEKGELTVRHTLSRVDG 239 Query: 261 --MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVF 318 + PKT+ R V L + LK R + + R+ G + + Sbjct: 240 KLVLTEPKTDRSRRRVPLHAGVVAQLKMHRTQQLQERLAAGDQW-RDTGAVLATEFGTLL 298 Query: 319 MPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQ 378 PR +L A + GI + RH+ A L +G + A Sbjct: 299 DPR-------------NLLRTVEIAAAKVGIEDVGAHTMRHSAAVAWLESGVHIKAAADL 345 Query: 379 MGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 +GH + + ++YG D+ + L L Sbjct: 346 LGHSSIAITGDLYGHTSDETARAAVDGLGTAL 377 >UniRef50_C0X7V2 Integrase family protein n=1 Tax=Enterococcus faecalis TX0104 RepID=C0X7V2_ENTFA Length = 376 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 91/412 (22%), Positives = 150/412 (36%), Gaps = 67/412 (16%) Query: 16 RIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMV 75 RI + GK RE K T + + A N + ++NSG +V Sbjct: 15 RIRYKENGK-FREVSKSGFRTKRDAQAAAN---ELERKLNSG---------------LVV 55 Query: 76 TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 E W K+KE ++ +T+ K ++ + I+ IR D +N+ Sbjct: 56 QHNKDILVQEYLSSWIKLKEKQVKKSTLAKLNRAIRLHILPQFAYYKITEIRRIDCINWV 115 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS-GFISTKPFEGVKKLQR 194 NE+ ++ + +Y + S L A I + P + +K + Sbjct: 116 NEMCT--------------HLSIESAKSYCSTFNSALEDAVNDFKLIDSNPMKNIKYPKT 161 Query: 195 NRIK--PDPLSKTEFNALMESE----------KGQSQNLWKFAVYSGLRHGELAALAWED 242 + K K E L+ + Q L +GLR GE AL WED Sbjct: 162 EKRKTAIQFFEKRELQNLLVTAESYKGTKPFINYQYYVLTFLLARTGLRLGEALALKWED 221 Query: 243 VDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQY-KLTGHHRKSE 298 V +K + V + L + PKT + RT+ L + +E LK K H KS Sbjct: 222 VTEDK--LTVSKTLYRENNQNFITTPKTISSYRTIILDKKCIELLKSFKIKKIEHSLKSN 279 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 ++E FVF + + + + A + + +P+ R Sbjct: 280 AFILNKE----------FVFTDSKGD-----FLKQCNYRTYFTTICTLADVPKLSPHALR 324 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 H+ A LL +G+N F++ ++GH T M +Y M E I+ L Sbjct: 325 HSHAVHLLESGSNIKFVSERLGHHTINMTANVYLHVSKKMETESISRYENFL 376 >UniRef50_B2V4P6 Phage integrase family protein n=9 Tax=root RepID=B2V4P6_CLOBA Length = 382 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 77/418 (18%), Positives = 139/418 (33%), Gaps = 60/418 (14%) Query: 7 GVEIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 GV +G +F GKR R KG + + + +G + Sbjct: 4 GVRKKGNRWYYYFEAGRVNGKRKRIERKGGDTKKEAQQALRMALNEFNN---TGSYV--- 57 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 +F + D W NT + KS + Sbjct: 58 -------------NETNMSFSDFLDYWFDEYVMKNCKYNTQQTYKSFININLKPNLGIYK 104 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ-SGFI 181 I + Y+ + + N+ G + T+ +++ L A FI Sbjct: 105 IKQLNYAALQEFLNKQYAH-------------GYSKNTLARLRSIISHSLEMAVSPYQFI 151 Query: 182 STKPFEGVKKLQRNRIKPD--PLSKTEFNALMESEKGQSQNLWKF--AVYSGLRHGELAA 237 P + + + + I + +S FN ++ + A +G+R GE+ Sbjct: 152 KVNPAKNLTLPRFDNIAKENIVISIENFNKIIGRFPCGTSFYIPLQIAFNTGMRVGEVCG 211 Query: 238 LAWEDVDLEKGIVNVRRNLTILDM----FGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 L W+ VD EK + + + L F PKT IRT+++ + LK Sbjct: 212 LTWDCVDFEKKTIRIEKILIFKTKQGYEFSTPKTKGSIRTISIGDTLINILKTHKNWQEE 271 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 ++K+ ++Y+ VC + + +++SL I+ N Sbjct: 272 NKKNYGSYYNDN--------------NFVCTKENGSFVTMTSLRYLSRIINMELQIK-FN 316 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + RHT A LL GAN I ++GH ++Y M + + +L L+ Sbjct: 317 FHSLRHTHATMLLEGGANIKDIQDRLGHSKFSTTMDLYSHVTAKMQNSTVNILENILN 374 >UniRef50_Q88SM0 Prophage Lp4 protein 1, integrase n=1 Tax=Lactobacillus plantarum RepID=Q88SM0_LACPL Length = 388 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 120/348 (34%), Gaps = 41/348 (11%) Query: 77 TRVIKTFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 TF EL W + + ++ +T T + + S + I + + Sbjct: 67 ANDNITFAELYTKWFNEDYKEQVKESTYMITDDIFRLHILPELGSQRVKRITVAQCQSIV 126 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 ++ L+ +T + S+ F + + P ++ Sbjct: 127 HKWLNQGF---------------KTYRRFRTYAISVFDFGVRMELTTRNPMAKTSIPKQK 171 Query: 196 RIK----PDPLSKTEFNALME----SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEK 247 D K+E ++ E Q+ ++ ++GLR GE AL W D++ E Sbjct: 172 TKPQAPHVDFYEKSELLHFLDCASKHENPQAFMFFRLLAFTGLRRGEALALQWSDINFET 231 Query: 248 GIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 + V + + + PKTN RT+ L + L + +K+T + E+ F Sbjct: 232 NELTVNKTQAVGKRWRTIIQTPKTNTSYRTIVLDPDTAQWLHK-WKMTQARQCFELGF-- 288 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 VF +Q S S++ + K+ G+R + RHTF Sbjct: 289 -----NANDPSQLVFTN-----QQNKLMSPSTVNYFNWSICKKYGLRHIKIHAFRHTFCT 338 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 A A ++ +GH ++ +IY +E + L +S Sbjct: 339 LAFEAHAGINEVSKTLGHADLKITEQIYLHVTKKQKNETASKLARYMS 386 >UniRef50_Q0FT82 Phage integrase n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FT82_9RHOB Length = 316 Score = 207 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 73/338 (21%), Positives = 137/338 (40%), Gaps = 37/338 (10%) Query: 80 IKTFGELCDIWTKIKE-TELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNEL 138 KT + C+ W K E +L +T+K +S + + + + ++ +EL Sbjct: 6 TKTVTDACESWLKTCERNQLERSTLKAYRSHARVHIEPKIGDLLLGDLSRGQVRDFMHEL 65 Query: 139 LHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIK 198 L G + V + L ++L A + +I VK +R R + Sbjct: 66 LDD-------------GISQALVRKVMVSLRAVLSEAVEREWIEHDVATDVKMRRRRRSE 112 Query: 199 PD---PLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 D +K E ++E+ + ++ A+++G+R EL L W++VDL++G+V+VR+ Sbjct: 113 SDERVIPTKDEIRLIVENAPASHRAMFIAAIFTGMRISELRGLTWDNVDLDRGLVHVRQR 172 Query: 256 LTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG-RTEKQKL 314 + G PK+ AG R + + + L Q++ T + F + + Sbjct: 173 ADEHCVLGKPKSRAGHRDIPMTPLVRDTL-AQWQRTVPVTVQNLVFPNGAGKIQNYSNIY 231 Query: 315 HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF 374 + VF P + N V AG + + RH A + G NP Sbjct: 232 NRVFKPMLV----------------ANGIVDAAGEPKFGLHALRHAAASLFIEQGWNPKK 275 Query: 375 IASQMGHETAQMVYEIYGMWIDDMNDEQI--AMLNARL 410 I + +GH + M ++YG ++ ++ A L + L Sbjct: 276 IQTLLGHASITMTMDVYGHLFENAEEDVSMFAKLESDL 313 >UniRef50_B9E9M6 Integrase n=12 Tax=Staphylococcaceae RepID=B9E9M6_MACCJ Length = 388 Score = 207 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 124/344 (36%), Gaps = 37/344 (10%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T+ ++ +W + TE+ T+ +S+ K+ + PI I NE Sbjct: 67 TYEDIYLMWIENHRTEIRGTTLASKESKFKSRILPKFGRIPIKEISRVYCQTVVNEWSKE 126 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP-- 199 + ++Y+ + +A + I P E + R K Sbjct: 127 MKAF----------------NDYVIQARLVFNYAMKLELIDKNPMEYITLPSRLEDKVFV 170 Query: 200 ----DPLSKTEFNALM----ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVN 251 L+K E M E K Q+ L++ ++G+R GE+ AL W D++ + Sbjct: 171 EQSRKFLTKEELKQFMIYLEEENKTQNTCLFRLLAFTGMRKGEVLALHWSDINFVNKDLY 230 Query: 252 VRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 V++ L ++ + PPKT R + + + L + + Y Sbjct: 231 VKKTLAKVNNKHVLQPPKTRESQRWIDIDNQTISKLLQWKEEQKLQ-------YEEYGFS 283 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKR-AGIRRRNPYHTRHTFACWLLT 367 K +F + Y VS+ + A KR + + + + + RHT A L Sbjct: 284 VASDKEQPIFSTYHTRLNEMKYMRVSTPNDKLEAFFKRHSDLHKIHVHGFRHTHASLLFE 343 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 +GA + +++GH + +IY ++ N ++ Sbjct: 344 SGATLKEVQTRLGHSDIKTTMDIYTHITQSSREKLADKFNTYVN 387 >UniRef50_A7WY94 Integrase homolog n=25 Tax=Firmicutes RepID=A7WY94_STAA1 Length = 397 Score = 207 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 74/353 (20%), Positives = 131/353 (37%), Gaps = 49/353 (13%) Query: 70 TGAKMVTTRVIKTFGELC-DIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 ++ + TF +I+ +T++ T + +K + +S I Sbjct: 53 KPEELSENKDKMTFKHYIFEIFLPWYKTQVKLRTYENRLPTIKKH-FSYFDKMAVSDIEP 111 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 D+ N++ +L K V L + A G +T P + Sbjct: 112 IDVQNWQLKLS--------------KKCKSSYVRAVQGLFSVAMDRAIVLGITTTNPSKI 157 Query: 189 VKKLQRNRIKPDPLSKTEFNA---LMESEKGQSQNLW---KFAVYSGLRHGELAALAWED 242 + +++ + K + +K EF L+ E L+ F +G+R GE A+ WED Sbjct: 158 IGNVKKQKSKIEFWTKEEFEKVISLIYKEDYYQHFLFISLWFLFMTGMRIGEATAIQWED 217 Query: 243 VDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 +D + G++ + + L + F PKT A +R + L + L L E ++ + +++ Sbjct: 218 IDFDSGVLTINKTLYYKNQSNYRFVEPKTKASVRHIVLDKCTLTYLSEWKEVQQNLIQTD 277 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 Y QK +L K AGI R + R Sbjct: 278 FVM---SYNGIPTQK--------------------HTLSYAIERYAKLAGIHRIRIHGLR 314 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 H+ A L++ G NP I ++GHE + YG + N E LN +S Sbjct: 315 HSHASLLISMGENPLIIKDRLGHEDIETTLGTYGHLYPNSNFEVANKLNGAIS 367 >UniRef50_UPI0001C375B8 hypothetical protein RflaF_20511 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C375B8 Length = 465 Score = 207 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 75/405 (18%), Positives = 133/405 (32%), Gaps = 46/405 (11%) Query: 10 IRGRYIRIWFMFR---GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 ++ + F ++ GKR R+ + + K IV E + Sbjct: 13 VKNGKHYVVFDYKDHSGKRKRKWVNTELPEKCSKKALKEAVEAIVAEFDKSI-SEGEIAV 71 Query: 67 QSSTGAKMV----TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 +S+ T + W + + T + K I E+ P Sbjct: 72 KSANAVPYAVMSDETASTMLLDDFFTEWLTYIKPNVARTTHLCYRKVSKRYMEYINENYP 131 Query: 123 ---ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + + ++ I NY N L G T Y L S +A + Sbjct: 132 NLTLGQVNHNHIQNYLNYKLD-------------SGCKGSTAKQYYLALHSAFAYAVKME 178 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWK-FAVYSGLRHGELAAL 238 I P + + + R + + E N L E KG L A Y GLR E+ L Sbjct: 179 LIPKHPMDKLVVPRAERHEATFYNADELNELFEVFKGDKLELVVNIAAYYGLRRCEILGL 238 Query: 239 AWEDVDLEKGIVNVRRNLT---------ILDMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 W+ +D + + ++R + + + KTN+ RT+ L+ E L E+ K Sbjct: 239 RWDAIDFKNKTITIQRKIVSDYDDNGEIKIFVETRLKTNSTRRTLPLIPHIEEMLLEKKK 298 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 + +K+ Y++E F +C S + ++ + R G+ Sbjct: 299 MEVKFKKACGKSYNKE------------FDGFICRDNYGNMISPGYVTQHFHYIITRNGL 346 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMW 394 + + RH+ A LL I +GH + +Y Sbjct: 347 KHLRFHDLRHSCASLLLAHDVPMKAIQEWLGHSNFSITANLYSHL 391 >UniRef50_C5WGZ4 Integrase n=18 Tax=root RepID=C5WGZ4_STRDG Length = 362 Score = 207 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 120/351 (34%), Gaps = 61/351 (17%) Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 A++ + TFG L D W K E + +T KT+ + + + I I I Sbjct: 51 AELDKPKSSMTFGALTDQWLKEYEKTVQGSTYLKTERNINKHILPKLDKVKIGDINPLLI 110 Query: 132 L----NYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 + N+L +G + L+ ++L A + G+I+ P Sbjct: 111 QRLTEEWCNDLKYGG--------------------KILGLVRNILNLAVRYGYINNNPAL 150 Query: 188 GVKKLQRNRIKP---DPLSKTEFNALME----SEKGQSQNLWKFAVYSGLRHGELAALAW 240 + + R + + + + +E ++ + L++ ++G+R GEL AL W Sbjct: 151 PITPPKIKRKRKMNNNFYTLDQLKQFLELVEKTDNIEKIALFRLLAFTGIRKGELLALTW 210 Query: 241 EDVDLEKGIVNVRRNLTILDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 +D L +++ + +T + KT + R ++L LE L E + Sbjct: 211 DD--LNGNTLSINKAVTRTQVGLEIDVTKTKSSDRLISLDDETLEILLELRET------- 261 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 F + + + S +K + + + Sbjct: 262 ------------------FPTSTLMFQSESGGIMTPSLPRKWLLQIIKGTDLPQITIHGF 303 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 RHT A L +G + + ++GH Q +Y D+ N Sbjct: 304 RHTHASLLFESGLSLKQVQHRLGHGDLQTTMNVYTHITQSAIDDIGTKFNE 354 >UniRef50_C7GI02 Site-specific recombinase, phage integrase family n=12 Tax=Bacteria RepID=C7GI02_9FIRM Length = 431 Score = 207 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 76/400 (19%), Positives = 151/400 (37%), Gaps = 42/400 (10%) Query: 47 RALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTK--IKETELTTNTMK 104 + + E S + LR+ K V T G+L D+W + +K L+ T++ Sbjct: 29 KECVGTESKSETEKLLRQAMDDYEKKKFVAKADNLTVGQLLDVWAEEELKTGTLSNGTVE 88 Query: 105 KTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNY 164 ++ ++ + ++ + ++ +LL ++ D +KG + + ++ Sbjct: 89 NYLGTIRNIKKHPLAERKLKNVTSEHLQSFF-DLLSFGGVHPDG--KERKGYSKDYIHSF 145 Query: 165 IALLCSLLRFAY-QSGFISTKPFEGVK-KLQRNRIK----------PDPLSKTEFNALME 212 A++ RFA +I+ P + +K + Q + + P+S+ ++ L+ Sbjct: 146 SAVMQQSFRFAVFPKQYITFNPMQYIKLRYQTDEVDLFSDEDMDGNVQPISREDYERLLA 205 Query: 213 SEKGQSQNLWK---FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL----TILDMFGPP 265 + ++ A Y+GLR GE LAW+DV+LE+ + +RR++ + P Sbjct: 206 YLQKKNPAAILPIQIAYYAGLRIGEACGLAWQDVNLEEQCLTIRRSIRYDGSKRKYIIGP 265 Query: 266 KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL----------- 314 +R V +E + K +R YH Y + K+K Sbjct: 266 TKRKKVRVVDFGDTLVEIFRNARKEQLKNRMQYEELYHTNYYKEVKEKNRVYYEYYCLDR 325 Query: 315 ------HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA-GIRRRNPYHTRHTFACWLLT 367 + + VC ++LG K G + + RHT+ LL Sbjct: 326 TQEVPADYKEISFVCLRPDGCLELPTTLGTVCRKVAKALEGFEGFHFHQLRHTYTSNLLA 385 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 GA P + +GH +Y D + + +L+ Sbjct: 386 NGAAPKDVQELLGHSDVSTTMNVYAHSTRDAKRKSVRLLD 425 >UniRef50_UPI0001C3746F phage integrase family site specific recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3746F Length = 366 Score = 207 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 127/345 (36%), Gaps = 47/345 (13%) Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 + + + T E D W + ++ ++ L + I IS + I Sbjct: 55 TEKNISAIRLTVREAADQWLSAARLRVKESSYANYENILNNHILPILGGEYISSLTTGRI 114 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 ++ + L + + G + +TV + + + S+ R+ Y+ I Sbjct: 115 NDFIHYKLT------NGRLKGQGGLSAKTVRDIMTVYRSVERYVYREYGIRE---TNFTM 165 Query: 192 LQRNRIKPDPLSKTEFNALMESE---KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKG 248 + D L+ E L ++ +++GLR GEL L WED+D EK Sbjct: 166 PKTESGNADVLNCEERKKLESYLIKNMDRTNLAVLLCLFTGLRIGELCGLKWEDIDFEKN 225 Query: 249 IVNVRRNLTILD-------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 ++V+R + + + G PK+ IRTV + + L++ Sbjct: 226 TLSVKRTVQRVSRNGKSQVIIGSPKSRTSIRTVPIPIFMMALLRKFR------------- 272 Query: 302 YHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTF 361 + +F+ + +P ++ R+ A +K GIR N + RHT+ Sbjct: 273 -----------SIDSLFVITNLSKPTEP----RTMQNRFKAILKLCGIRNVNFHSLRHTY 317 Query: 362 ACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 A + G +P ++ +GH A + Y D+ ++ L Sbjct: 318 ATVCIEKGFDPKALSELLGHADASITLNRYVHSSMDVKKNYVSRL 362 >UniRef50_Q65KT3 Lambda integrase-like protein(Phage related) n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KT3_BACLD Length = 379 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 123/389 (31%), Gaps = 51/389 (13%) Query: 32 GWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWT 91 G + N K E + E+ + ++ R TF ++ W Sbjct: 22 GIDPKTGNRKTTTRRGFKTKKEAVAAAAEFQKEIDNNALA------RNDITFEDVFKEWW 75 Query: 92 KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRS 151 + + +T + S K + I I + N + Sbjct: 76 DVHSKTIKRSTRYRKLSNFKKHILPHFGKLKIKDITRAYCQKVINLIAQD---------- 125 Query: 152 NKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR-------IKPDPLSK 204 + +V N + ++A + +I+ P E V ++ K + K Sbjct: 126 ------IDSVQNVKIQANLVFKYALRMEYITKNPMEFVVIPKKEENFLSQEEEKRNFWEK 179 Query: 205 TEFNALMESEK----GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL---T 257 E +E Q ++ +++G+R GEL AL W+DVDL++ +N+++ + Sbjct: 180 DEIKTFLEKAHSQLAPQDYVMFYVLIFTGMRKGELIALEWKDVDLKEKTINIKQTMFFEN 239 Query: 258 ILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 ++ K R +T+ + LK+ S +Y Sbjct: 240 GKEVIQTTKKYHSKRIITIDDQTAQILKKWRTQQKEMLLSNGITSEAKYVLIRGD----- 294 Query: 318 FMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 ++ N + + + R + RH+ A L AGA+ + + Sbjct: 295 ----------MRPLRLAYPNDLLNRMITKNKLHRITIHGFRHSHASILFEAGASIKEVQA 344 Query: 378 QMGHETAQMVYEIYGMWIDDMNDEQIAML 406 ++GH+ Q IY + Sbjct: 345 RLGHKEIQTTMNIYTHVTKTAKAKTAETF 373 >UniRef50_C0X0P7 Phage integrase family site specific recombinase n=4 Tax=Enterococcus faecalis RepID=C0X0P7_ENTFA Length = 369 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 124/343 (36%), Gaps = 53/343 (15%) Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T E + W I + E+ +T +L + + ++ I + +L+ Sbjct: 67 TLNEWIEQWLVIVKKEVKLSTFASYSYKLSNYVLKTMGDSALNEIDDLRLNKLVEDLIA- 125 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 +G + T+ +L L A ++ + + P + + R Sbjct: 126 ------------QGLSKSTICVIFGILSRALNHAVKAKHLKSNPCSTISLPKPKRRHIRA 173 Query: 202 LSKTEFNAL--MESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 L E L + + Q Q L A+++GLR GELAAL WED++ +K ++V+ Sbjct: 174 LDIEEQKKLENVAYKNPQQQGLSVIVALHTGLRIGELAALRWEDINFKKDTIHVKHTFQR 233 Query: 259 LDM----------FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 + + + KT R + + ALK Q + + Sbjct: 234 VSVSSFGESTQLYYDCTKTINSERIIPMSNTVKNALKCQKEHSQGK-------------- 279 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTA 368 FVF + L ++ + + + + + RHTFA L + Sbjct: 280 -------FVFS------RNNKPCEPRLLTYYFHKLRDKVQLDKVHFHQLRHTFATRCLES 326 Query: 369 GANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 ++ +++ +GH + QM +IY + + + I + ++ Sbjct: 327 TSDIVSVSALLGHSSTQMTLDIYADSLLEQRIKAIKRMERTIA 369 >UniRef50_A5ZQX5 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQX5_9FIRM Length = 407 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 87/385 (22%), Positives = 144/385 (37%), Gaps = 53/385 (13%) Query: 36 TNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE 95 T+SN K++ V+ + E + + T T E ++ K+ Sbjct: 31 TDSNGKRST------VYALTLAELRKKEEQIKRDQMDGIYTKGGNLTLNEFFRLFMSTKK 84 Query: 96 TELTTNTMKKTKSQLKTLRII-ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKK 154 + +T KS K IS I+ + +LL +K Sbjct: 85 N-IRDSTRCNYKSYWKNAIAPSALGIMKISEIKQIHVKRLYADLL-------------EK 130 Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK-LQRNRIKPDPLSKTEFNALMES 213 G + T+ Y +L L+ A S I P +G +K + + + L+ E ++E Sbjct: 131 GYSPGTIRAYHIILSECLQAAVDSDMIRKNPAKGSRKGIDKEVSRKRALTIEEQETMLEF 190 Query: 214 EKGQ-----SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG----- 263 K L FA+ +GLR GEL L W+D+DLEK +++VRR L ++ G Sbjct: 191 TKNSNSYKIHYPLIVFALSTGLRVGELGGLLWDDIDLEKNMIHVRRQLVYRNLDGTGCKF 250 Query: 264 ---PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMP 320 P KT AG R + L + A +AL +Q R+ ++ R + +FVF+ Sbjct: 251 HIQPLKTEAGERDIPLTKTAKKALMKQ-------REYDLLLGKRAKEQPVAGLKNFVFLN 303 Query: 321 RVCNGKQKPYYS---VSSLGARWNAAVKRAG--------IRRRNPYHTRHTFACWLLTAG 369 N + + A +K+A + + + RHTF +G Sbjct: 304 HQGNQLAPQVLDSALRNIIKAYNKKELKQADKEHGEPFLLPHISAHILRHTFCTRAAESG 363 Query: 370 ANPAFIASQMGHETAQMVYEIYGMW 394 + + MGH M E Y Sbjct: 364 VDVKSLQYIMGHADITMTMERYNHV 388 >UniRef50_C9CCW8 Site-specific recombinase n=1 Tax=Enterococcus faecium 1,230,933 RepID=C9CCW8_ENTFC Length = 378 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 128/343 (37%), Gaps = 49/343 (14%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F ++ W + ++ +T K ++ L + + + S + I + I N Sbjct: 69 FEQVAMEWFQAICPKVKESTSNKYRNLLSSYILPVFGSKQLRDITHEFIETQCN------ 122 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 +L + + G + +TV + ++L+ ++L+FA ++G + ++ ++R + L Sbjct: 123 -FFLVSGGLKENGLSSKTVSDILSLIRNVLQFATRNGKAISCDARSIQ-IKRQTKEMRVL 180 Query: 203 SKTEFNALMESEKGQSQNL---WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 S+ E L + + +++GLR GE+ AL WEDV ++V + L + Sbjct: 181 SRAEQEKLCQYLYSNLDSCNIGILVCLFTGLRVGEICALRWEDVSFSDYTIHVHQTLQRI 240 Query: 260 D-----------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 + PK+ IRT+ + + L + Sbjct: 241 QDRTNSEYKTRIVVTTPKSACSIRTIPVPHGLMTILTAHKASS----------------- 283 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTA 368 + + ++ + +K +GI N + RHTFA + Sbjct: 284 ----------TGYILTNSDQNPLEPRTMQNHFKKVLKNSGITSANYHSLRHTFATRCIEL 333 Query: 369 GANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 G + ++ +GH + + Y D+ E + L+ L+ Sbjct: 334 GFDVKSLSEILGHASVNITMNRYVHPSMDLKRENMQRLSDLLA 376 >UniRef50_A5KPC6 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A5KPC6_9FIRM Length = 400 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 69/350 (19%), Positives = 121/350 (34%), Gaps = 45/350 (12%) Query: 82 TFGELCDIWTKI-KETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 T WT++ K+ + T+ K S + I+ + + NEL+ Sbjct: 67 TLNAWYVTWTELYKKKTVKMTTIYKNHSYYNARVKNSIGKMYLQDIKTYHVQKFINELID 126 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD 200 G TV N +L + A S +I P V+ + + + Sbjct: 127 -------------SGLAHGTVSNIRFMLSDMFDKAVLSEYIRKNPCIAVEMPPKVKKERR 173 Query: 201 PLSKTEFNALMESEKGQSQ-NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 L++ E N+ KFAV +G R GE+ L WED D EK + + + + Sbjct: 174 VLTREEQKKFFTFASSYIHINVLKFAVTTGCRIGEVLGLKWEDCDFEKREITINKTIHYS 233 Query: 260 DM----------FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 + KT + R + + E L+ Q + + R + Sbjct: 234 KASSPVEGSKFFYTTAKTISSNRVIPMTDEVYEILQNQKIKQTEQKM-----WKRSIWKQ 288 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR-------------RNPYH 356 K+ + VF +G YY+V+S + A + I + Sbjct: 289 HKEFQNLVFTCS--DGSPVYYYNVNSAIKDYVAKINVIEIELAKEEKREPKIFELFTCHT 346 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 RHT+A G + + +GH T M ++Y ++ E++A L Sbjct: 347 LRHTYATRCYENGVDQQVVQKLLGHSTLAMTTDLYTHVSEEKKKEEVAEL 396 >UniRef50_C6VKZ1 Prophage Lp4 protein 1, integrase n=1 Tax=Lactobacillus plantarum JDM1 RepID=C6VKZ1_LACPJ Length = 385 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 59/362 (16%), Positives = 121/362 (33%), Gaps = 57/362 (15%) Query: 70 TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYS 129 TF E+ ++W K + + +T+ + + K I+ I + Sbjct: 60 RKNNPAAIMDNPTFDEVYEVWLKTYKLGVKESTLNRVEGIFKHHITPSFGGMRINTITW- 118 Query: 130 DILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV 189 + E L +V+ + + R A + G I+T P + V Sbjct: 119 --QKCQEEALKWRE-------------SVKQFNKLAQYAALVFRTAQKMGVITTNPMKLV 163 Query: 190 KKLQ------RNRIKPDPLSKTEFNALMESE----------KGQSQNLWKFAVYSGLRHG 233 + +++ + + + + + L+ +G+R G Sbjct: 164 DVPKIAVDYSKDKAADNFWTAEQLATFLAVVDATDGHRTQPRYDRSALFYLLATTGMRKG 223 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTIL----DMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 E AL W D+DL+ G+V + + ++ + PKT RT++L ++ LK+ K Sbjct: 224 EALALTWSDIDLKNGLVTINKTISRSIDNHQIISTPKTRNAYRTLSLNSSTIDRLKKYRK 283 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 +++ + + G+ SV + A + + Sbjct: 284 SLVVIPRAKDLIFTNQKGQI---------------------MSVMTPNHWLEALIGETDL 322 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + RHTFA + N + QMGH ++ IY Q+ ++ Sbjct: 323 PTITVHGLRHTFASIQVANNINVKALQMQMGHSDIKITLNIYAHLSQQELSAQVYDMSKI 382 Query: 410 LS 411 L+ Sbjct: 383 LA 384 >UniRef50_C4Z9N6 Integrase/recombinase, XerC/CodV family n=15 Tax=Bacteria RepID=C4Z9N6_EUBR3 Length = 411 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 75/364 (20%), Positives = 124/364 (34%), Gaps = 63/364 (17%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 L D + K TEL + T + ++YSD+L + +L+ Sbjct: 72 VNFLFDRYISTK-TELRSTTYSNYLYTWNHFIRDTFGKKKVRDVKYSDVLFFYTDLI--- 127 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG--VKKLQRN---RI 197 N +G + T++ +L + A + I P +G + +RN R Sbjct: 128 ---------NNQGLQINTLETINTVLRPTFQLAVRDDIIRKNPVDGAYCEVKKRNGGARK 178 Query: 198 KPDPLSKTEFNALMESEKG-----QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 L+ + ME + F + +G R GE + W+D+DLE I+++ Sbjct: 179 TRRALTVDQQRKFMEYVAKNPFFYHWYPFFVFLLGTGCRIGEAIGIRWDDIDLENRIIDI 238 Query: 253 RRNLTILDM----------FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 +LT PKT AG R + ++Q + L+E+Y+ K E Sbjct: 239 NHSLTYYQRADDSYKCEFRVSLPKTEAGNRRIPMMQQVYDVLQEEYERQ----KQEGFCV 294 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG-------------- 348 G T +FVF R ++ +++ V Sbjct: 295 ENVDGMT-----NFVFTNRF-----GMPHNPAAVNRAIKRIVDTHNSEEEVAAKKEKREP 344 Query: 349 --IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 I R + + RHTFA N I MGH IY D+ I L Sbjct: 345 VMIPRFSCHIFRHTFASRFCENETNIKVIQEVMGHADVSTTMNIYAEANPDVTKSVIEKL 404 Query: 407 NARL 410 + + Sbjct: 405 SKNM 408 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Ta... 421 e-116 UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damsel... 375 e-102 UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillu... 374 e-102 UniRef50_C8VWS4 Integrase family protein n=1 Tax=Desulfotomaculu... 372 e-101 UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Provide... 370 e-101 UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteria... 368 e-100 UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter c... 367 e-100 UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_... 366 e-100 UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoana... 364 3e-99 UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepI... 364 5e-99 UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum t... 349 9e-95 UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio ... 349 1e-94 UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH 347 5e-94 UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degen... 346 1e-93 UniRef50_B0KAT2 Phage integrase family protein n=7 Tax=Clostridi... 346 1e-93 UniRef50_C2RY84 Prophage LambdaBa04, site-specific recombinase, ... 342 2e-92 UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum th... 342 2e-92 UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria R... 341 3e-92 UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, ... 341 3e-92 UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus... 340 4e-92 UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces gr... 340 7e-92 UniRef50_B7IY65 DNA integration/recombination/invertion protein ... 340 7e-92 UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, ... 339 1e-91 UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus Rep... 338 2e-91 UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiotherm... 337 4e-91 UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum th... 337 5e-91 UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellul... 337 6e-91 UniRef50_A8MGP9 Integrase family protein n=1 Tax=Alkaliphilus or... 336 9e-91 UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria muco... 335 3e-90 UniRef50_D1C8V1 Integrase family protein n=1 Tax=Sphaerobacter t... 333 5e-90 UniRef50_C8VWK7 Integrase family protein n=1 Tax=Desulfotomaculu... 332 2e-89 UniRef50_A4ILC8 DNA integration/recombination/invertion protein ... 331 3e-89 UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridi... 328 2e-88 UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C ... 328 2e-88 UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1Z... 327 7e-88 UniRef50_Q3Z840 Site-specific recombinase, phage integrase famil... 326 7e-88 UniRef50_Q0AUP6 Phage integrase n=1 Tax=Syntrophomonas wolfei su... 326 8e-88 UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5... 325 1e-87 UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase famil... 325 1e-87 UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobac... 324 3e-87 UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp.... 323 5e-87 UniRef50_A8L4Q7 Integrase family protein n=9 Tax=Actinomycetales... 323 6e-87 UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum th... 322 1e-86 UniRef50_C9AMW3 Phage integrase n=8 Tax=Enterococcus faecium Rep... 322 1e-86 UniRef50_D2BJR0 Site-specific recombinase, phage integrase famil... 321 2e-86 UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53... 321 2e-86 UniRef50_C1CZ59 Putative Tyrosine recombinase xerC-like protein ... 320 4e-86 UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halotherm... 319 1e-85 UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales... 319 1e-85 UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID... 318 2e-85 UniRef50_B8I354 Integrase family protein n=1 Tax=Clostridium cel... 318 2e-85 UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostri... 317 5e-85 UniRef50_P76168 Putative lambdoid prophage Qin defective integra... 316 8e-85 UniRef50_D1A578 Integrase family protein n=1 Tax=Thermomonospora... 316 1e-84 UniRef50_A9VJZ8 Integrase family protein n=15 Tax=Bacillus cereu... 316 1e-84 UniRef50_C3EB65 DNA integration/recombination/invertion protein ... 315 2e-84 UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus Re... 314 4e-84 UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilu... 313 5e-84 UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis... 313 8e-84 UniRef50_UPI000169495E prophage LambdaBa04, site-specific recomb... 312 1e-83 UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degen... 312 1e-83 UniRef50_UPI0001694281 DNA integration/recombination/invertion p... 309 1e-82 UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q1... 309 1e-82 UniRef50_A6P1V8 Putative uncharacterized protein n=2 Tax=Bactero... 308 2e-82 UniRef50_A9KI10 Integrase family protein n=1 Tax=Clostridium phy... 308 2e-82 UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp... 308 2e-82 UniRef50_Q9F0J7 Integrase-like protein n=7 Tax=Staphylococcus Re... 308 3e-82 UniRef50_C2YK72 Phage integrase n=3 Tax=Bacillus cereus group Re... 308 3e-82 UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8H... 307 4e-82 UniRef50_A6TLJ2 Phage integrase family protein n=1 Tax=Alkaliphi... 307 6e-82 UniRef50_A4J0G7 Phage integrase family protein n=1 Tax=Desulfoto... 307 7e-82 UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanell... 306 1e-81 UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 R... 305 2e-81 UniRef50_A4J1T6 Phage integrase family protein n=1 Tax=Desulfoto... 305 2e-81 UniRef50_A7VZ12 Putative uncharacterized protein n=2 Tax=Clostri... 305 2e-81 UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium R... 304 4e-81 UniRef50_B2V4P6 Phage integrase family protein n=9 Tax=root RepI... 304 4e-81 UniRef50_UPI0001C37C27 integrase family protein n=1 Tax=Ruminoco... 303 5e-81 UniRef50_D2SBK5 Integrase family protein n=1 Tax=Geodermatophilu... 303 7e-81 UniRef50_A8MGA1 Integrase family protein n=7 Tax=Clostridiaceae ... 303 8e-81 UniRef50_C4V5B3 Prophage LambdaCh01, site-specific recombinase p... 303 8e-81 UniRef50_C0QHJ7 Phage integrase family protein n=1 Tax=Desulfoba... 303 9e-81 UniRef50_C9XJT1 Integrase n=6 Tax=Clostridium difficile RepID=C9... 303 1e-80 UniRef50_Q0H247 DNA integration/recombination protein n=6 Tax=ro... 302 1e-80 UniRef50_Q8ETV2 Integrase n=3 Tax=Bacilli RepID=Q8ETV2_OCEIH 302 1e-80 UniRef50_C0XLK8 Phage integrase family site specific recombinase... 302 1e-80 UniRef50_B0PGN1 Putative uncharacterized protein n=2 Tax=Clostri... 302 2e-80 UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter al... 302 2e-80 UniRef50_C9R814 Integrase family protein n=2 Tax=Ammonifex degen... 302 2e-80 UniRef50_A5N1F6 Integrase-related protein n=3 Tax=Clostridia Rep... 301 3e-80 UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5... 301 3e-80 UniRef50_C1IAU4 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FA... 301 4e-80 UniRef50_C1IBC3 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FA... 300 4e-80 UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobact... 300 4e-80 UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integra... 300 4e-80 UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillu... 300 5e-80 UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaeroc... 300 7e-80 UniRef50_C6LG06 Prophage LambdaBa02, site-specific recombinase, ... 300 7e-80 UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crun... 300 7e-80 UniRef50_Q03GP3 Integrase n=1 Tax=Pediococcus pentosaceus ATCC 2... 299 1e-79 UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobac... 299 1e-79 UniRef50_D1BL69 Integrase family protein n=1 Tax=Veillonella par... 299 1e-79 UniRef50_C4FP65 Putative uncharacterized protein n=1 Tax=Veillon... 299 1e-79 UniRef50_B2TMD1 Prophage LambdaBa04, site-specific recombinase, ... 298 2e-79 UniRef50_C3IU95 DNA integration/recombination/inversion protein ... 298 3e-79 UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, ... 298 3e-79 UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius... 298 4e-79 UniRef50_B2TKJ3 Phage integrase family protein n=4 Tax=Clostridi... 297 5e-79 UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaprot... 297 6e-79 UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilu... 297 7e-79 UniRef50_UPI0001C375E4 hypothetical protein RflaF_02473 n=2 Tax=... 297 7e-79 UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostrid... 295 1e-78 UniRef50_C5WEI1 Site-specific recombinase, phage integrase famil... 295 2e-78 UniRef50_C2NSI2 DNA integration/recombination/invertion protein ... 295 2e-78 UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK... 295 2e-78 UniRef50_D1PRY2 Site-specific recombinase, phage integrase famil... 295 3e-78 UniRef50_C7T893 Phage integrase n=5 Tax=Lactobacillus RepID=C7T8... 294 4e-78 UniRef50_B0ABY5 Putative uncharacterized protein n=3 Tax=Clostri... 294 4e-78 UniRef50_C5UVC6 Site-specific recombinase, phage integrase famil... 294 4e-78 UniRef50_D0L542 Integrase family protein n=3 Tax=Bacteria RepID=... 294 4e-78 UniRef50_Q82ZU2 Site-specific recombinase, phage integrase famil... 294 5e-78 UniRef50_A0JQA1 Phage integrase n=2 Tax=Lactobacillales RepID=A0... 293 6e-78 UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF... 293 6e-78 UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rh... 293 7e-78 UniRef50_Q65KT3 Lambda integrase-like protein(Phage related) n=1... 293 1e-77 UniRef50_A7B6B9 Putative uncharacterized protein n=2 Tax=Clostri... 293 1e-77 UniRef50_B2TP23 Prophage LambdaBa04, site-specific recombinase, ... 292 1e-77 UniRef50_C0BF20 Putative uncharacterized protein n=1 Tax=Coproco... 292 1e-77 UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auens... 292 2e-77 UniRef50_C9A167 Integrase n=1 Tax=Enterococcus gallinarum EG2 Re... 292 2e-77 UniRef50_C8NHZ6 Phage integrase family site-specific recombinase... 292 2e-77 UniRef50_C7WMG1 Integrase n=9 Tax=Enterococcus RepID=C7WMG1_ENTFA 292 2e-77 UniRef50_B4V6V4 Phage integrase n=6 Tax=Streptomyces RepID=B4V6V... 291 3e-77 UniRef50_A0QET6 TraSA:integrase fusion protein n=1 Tax=Mycobacte... 291 4e-77 UniRef50_Q252J3 Putative uncharacterized protein n=1 Tax=Desulfi... 290 7e-77 UniRef50_Q88UJ5 Prophage Lp3 protein 1, integrase n=1 Tax=Lactob... 290 9e-77 UniRef50_UPI0001BCC5A1 phage integrase n=1 Tax=Aeromicrobium mar... 289 1e-76 UniRef50_D2SF19 LigA n=1 Tax=Geodermatophilus obscurus DSM 43160... 289 1e-76 UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovi... 288 3e-76 UniRef50_C2BD46 Possible phage integrase n=1 Tax=Anaerococcus la... 288 4e-76 UniRef50_Q88SM0 Prophage Lp4 protein 1, integrase n=1 Tax=Lactob... 287 4e-76 UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella mul... 287 4e-76 UniRef50_B5H9T3 TraSA integrase fusion protein n=4 Tax=Streptomy... 287 4e-76 UniRef50_D2BLD3 Phage integrase n=4 Tax=root RepID=D2BLD3_LACLK 287 4e-76 UniRef50_A3DCS0 Phage integrase n=6 Tax=Bacteria RepID=A3DCS0_CLOTH 287 5e-76 UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenic... 287 5e-76 UniRef50_A1HTM7 Phage integrase family protein n=1 Tax=Thermosin... 287 5e-76 UniRef50_UPI0001C37419 Phage integrase n=1 Tax=Ruminococcus flav... 287 7e-76 UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteri... 286 9e-76 UniRef50_A1SI41 Phage integrase family protein n=1 Tax=Nocardioi... 286 1e-75 UniRef50_A4XLL4 Phage integrase family protein n=1 Tax=Caldicell... 285 2e-75 UniRef50_C2VI23 Site-specific recombinase, phage integrase n=3 T... 285 3e-75 UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus... 284 4e-75 UniRef50_C0EE56 Putative uncharacterized protein n=1 Tax=Clostri... 284 5e-75 UniRef50_B0TI08 Phage integrase family protein n=14 Tax=root Rep... 283 7e-75 UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum t... 283 8e-75 UniRef50_A8LF05 Integrase family protein n=1 Tax=Frankia sp. EAN... 283 8e-75 UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6G... 283 8e-75 UniRef50_A4XMV7 Phage integrase family protein n=2 Tax=Caldicell... 283 9e-75 UniRef50_Q0REL9 Integrase (Recombinase) n=2 Tax=Frankia RepID=Q0... 283 9e-75 UniRef50_C9C7Z3 Phage integrase n=2 Tax=Bacilli RepID=C9C7Z3_ENTFC 283 9e-75 UniRef50_A2RHC7 Phage integrase n=3 Tax=root RepID=A2RHC7_LACLM 283 1e-74 UniRef50_C0EC03 Putative uncharacterized protein n=1 Tax=Clostri... 282 1e-74 UniRef50_Q98MQ9 Bacteriophage integrase n=5 Tax=Rhizobiales RepI... 282 2e-74 UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC 282 2e-74 UniRef50_B6FZV4 Putative uncharacterized protein n=1 Tax=Clostri... 282 2e-74 UniRef50_C4RQL8 Integrase n=2 Tax=root RepID=C4RQL8_9ACTO 282 2e-74 UniRef50_C9CDR3 Site-specific recombinase n=2 Tax=Enterococcus f... 282 2e-74 UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostri... 282 2e-74 UniRef50_C7CS77 Predicted protein n=3 Tax=Enterococcus faecalis ... 281 2e-74 UniRef50_Q1CP24 DNA integration/recombination/inversion protein ... 281 2e-74 UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-r... 281 3e-74 UniRef50_UPI0001C375B8 hypothetical protein RflaF_20511 n=1 Tax=... 281 3e-74 UniRef50_C5UUP0 Phage integrase n=1 Tax=Clostridium botulinum E1... 281 4e-74 UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp... 281 4e-74 UniRef50_D2Q711 Phage integrase n=2 Tax=Bifidobacterium dentium ... 281 4e-74 UniRef50_A6NRR1 Putative uncharacterized protein n=1 Tax=Bactero... 280 5e-74 UniRef50_Q636X3 Phage integrase n=18 Tax=Bacillales RepID=Q636X3... 280 5e-74 UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostri... 280 8e-74 UniRef50_B0MMM2 Putative uncharacterized protein n=1 Tax=Eubacte... 280 8e-74 UniRef50_B9E9M6 Integrase n=12 Tax=Staphylococcaceae RepID=B9E9M... 280 8e-74 UniRef50_C7IDP6 Integrase family protein n=1 Tax=Clostridium pap... 280 9e-74 UniRef50_C0VGS2 Phage integrase n=2 Tax=Acinetobacter RepID=C0VG... 280 9e-74 UniRef50_UPI0001C3741D prophage LambdaBa04, site-specific recomb... 279 1e-73 UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovi... 279 1e-73 UniRef50_Q1QXU7 Phage integrase n=4 Tax=root RepID=Q1QXU7_CHRSD 279 1e-73 UniRef50_Q24ZE5 Putative uncharacterized protein n=1 Tax=Desulfi... 279 1e-73 UniRef50_A5N1D5 Phage integrase-related protein n=2 Tax=Clostrid... 279 1e-73 UniRef50_C5WGZ4 Integrase n=18 Tax=root RepID=C5WGZ4_STRDG 279 1e-73 UniRef50_C1B977 Putative integrase n=2 Tax=Nocardiaceae RepID=C1... 279 2e-73 UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovi... 278 2e-73 UniRef50_A8RK44 Putative uncharacterized protein n=1 Tax=Clostri... 278 2e-73 UniRef50_C3C7W0 Phage integrase n=2 Tax=Bacillus thuringiensis R... 277 4e-73 UniRef50_Q831G3 Site-specific recombinase, phage integrase famil... 277 5e-73 UniRef50_C7TCR7 Integrase n=4 Tax=Lactobacillus RepID=C7TCR7_LACRG 277 5e-73 UniRef50_Q03L48 Integrase n=30 Tax=Streptococcus RepID=Q03L48_STRTD 277 6e-73 UniRef50_C3K9Z5 Putative phage integrase n=1 Tax=Pseudomonas flu... 277 6e-73 UniRef50_C9A1I5 Phage integrase n=20 Tax=Enterococcus RepID=C9A1... 277 6e-73 UniRef50_C0X6I8 Phage integrase family site specific recombinase... 276 8e-73 UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostrid... 276 9e-73 UniRef50_C4TVA5 Bacteriophage integrase n=3 Tax=Enterobacteriace... 276 1e-72 UniRef50_B9KYK7 Putative integrase n=1 Tax=Thermomicrobium roseu... 276 1e-72 UniRef50_B2THD3 Site-specific recombinase, phage integrase famil... 275 2e-72 UniRef50_Q30S15 Phage integrase n=2 Tax=Campylobacterales RepID=... 275 2e-72 UniRef50_B2UXR9 Phage integrase n=3 Tax=Clostridium RepID=B2UXR9... 275 2e-72 UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepI... 275 3e-72 UniRef50_Q1BC50 Phage integrase n=4 Tax=Mycobacterium RepID=Q1BC... 275 3e-72 UniRef50_Q7A4J3 Int protein n=24 Tax=Bacilli RepID=Q7A4J3_STAAN 275 3e-72 UniRef50_B3WDC1 Integrase n=3 Tax=root RepID=B3WDC1_LACCB 275 3e-72 UniRef50_B1J5J4 Integrase family protein n=4 Tax=Pseudomonas Rep... 274 5e-72 UniRef50_C2EIM6 Phage integrase n=1 Tax=Lactobacillus salivarius... 273 1e-71 UniRef50_D0J3Y8 Phage integrase n=5 Tax=Burkholderiales RepID=D0... 272 1e-71 UniRef50_Q65KE0 Lambda integrase-like, N-terminal,DNA breaking-r... 272 2e-71 UniRef50_C9N6T9 Integrase family protein n=7 Tax=Streptomyces Re... 272 2e-71 UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridi... 272 2e-71 UniRef50_C0X7V2 Integrase family protein n=1 Tax=Enterococcus fa... 271 2e-71 UniRef50_Q0RPW7 Integrase n=1 Tax=Frankia alni ACN14a RepID=Q0RP... 271 3e-71 UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostri... 271 4e-71 UniRef50_C7H630 Prophage LambdaCh01, site-specific recombinase, ... 271 4e-71 UniRef50_P96629 ICEBs1 integrase n=1 Tax=Bacillus subtilis RepID... 271 5e-71 UniRef50_A5VJF0 Phage integrase family protein n=4 Tax=Lactobaci... 270 5e-71 UniRef50_A2RN22 Phage integrase n=9 Tax=Streptococcaceae RepID=A... 270 5e-71 UniRef50_B1HWF0 Prophage Lp3 protein 1, integrase n=1 Tax=Lysini... 270 6e-71 UniRef50_C9B4G9 Integrase n=1 Tax=Enterococcus faecium 1,231,501... 270 7e-71 UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36... 270 7e-71 UniRef50_UPI0001C34CB8 phage integrase family protein n=1 Tax=Cl... 270 8e-71 UniRef50_A7WY94 Integrase homolog n=25 Tax=Firmicutes RepID=A7WY... 270 9e-71 UniRef50_C9AWV9 Integrase n=3 Tax=Bacilli RepID=C9AWV9_ENTCA 270 1e-70 UniRef50_C4Z3W8 Integrase/recombinase XerC n=7 Tax=Clostridiales... 270 1e-70 UniRef50_C7N7P7 Site-specific recombinase XerD n=3 Tax=Bacteria ... 269 1e-70 UniRef50_UPI0001C3746F phage integrase family site specific reco... 269 2e-70 UniRef50_A7A695 Putative uncharacterized protein n=1 Tax=Bifidob... 269 2e-70 UniRef50_B1R824 Prophage LambdaBa04, site-specific recombinase, ... 268 2e-70 UniRef50_C7H2F1 Prophage LambdaCh01, site-specific recombinase, ... 268 2e-70 UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodo... 268 3e-70 UniRef50_A8ZS80 Integrase family protein n=1 Tax=Desulfococcus o... 268 3e-70 UniRef50_C6JIX5 Phage integrase n=1 Tax=Fusobacterium varium ATC... 268 4e-70 UniRef50_C4ZBA5 Phage integrase family protein n=10 Tax=Firmicut... 267 5e-70 UniRef50_A6FXR9 Phage integrase n=1 Tax=Plesiocystis pacifica SI... 267 5e-70 UniRef50_A0AGT2 Complete genome n=7 Tax=Bacilli RepID=A0AGT2_LISW6 267 5e-70 UniRef50_Q30RZ4 Phage integrase n=1 Tax=Sulfurimonas denitrifica... 267 6e-70 UniRef50_B4AH95 DNA integration/recombination/invertion protein ... 267 6e-70 UniRef50_C2HC71 Phage integrase family site specific recombinase... 266 8e-70 UniRef50_B0KSD4 Integrase family protein n=1 Tax=Pseudomonas put... 266 9e-70 UniRef50_A5KPC6 Putative uncharacterized protein n=3 Tax=Clostri... 266 1e-69 UniRef50_C6VKZ1 Prophage Lp4 protein 1, integrase n=1 Tax=Lactob... 266 1e-69 UniRef50_D1VST0 Phage integrase n=1 Tax=Peptoniphilus lacrimalis... 266 1e-69 UniRef50_C2KIC3 Bacteriophage integrase n=2 Tax=Leuconostoc mese... 265 2e-69 UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae ... 265 2e-69 UniRef50_C7GI02 Site-specific recombinase, phage integrase famil... 265 2e-69 Sequences not found previously or not previously below threshold: >UniRef50_P76056 Putative lambdoid prophage Rac integrase n=30 Tax=Bacteria RepID=INTR_ECOLI Length = 411 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 411/411 (100%), Positives = 411/411 (100%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE Sbjct: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES Sbjct: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF Sbjct: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAW 240 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAW Sbjct: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAW 240 Query: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT Sbjct: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT Sbjct: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS Sbjct: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 >UniRef50_D0Z3D7 Putative integrase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z3D7_LISDA Length = 428 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 175/415 (42%), Positives = 245/415 (59%), Gaps = 4/415 (0%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 MS P G+E+RG+ IRI F F+GKRCRETL GW++T SNIKKAG LRA+IV EI G+F Sbjct: 1 MSMYPEGIEVRGKSIRITFYFKGKRCRETLTGWDVTPSNIKKAGRLRAVIVSEIACGKFN 60 Query: 61 YLRRFPQSSTGAKMVTTRV--IKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 YL RFP S ++ + + + + IK ELT +++ +T+S LKT ++ Sbjct: 61 YLERFPNSKNTLQISVQNPHVDCSLNDFIEHFLLIKSVELTESSIIRTRSGLKTCAKLLG 120 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 IS+I ++DI++ R +LL+G R GR+V+TV+ Y+ + SL ++AY++ Sbjct: 121 GERLISNITHADIMSMRLKLLNGSNFSPSPIRRTSNGRSVKTVNTYLTICSSLFKYAYRT 180 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES--EKGQSQNLWKFAVYSGLRHGELA 236 I T PF+GV +L+ + P+PL EF L+ + Q NLW AVY+GLRHGEL+ Sbjct: 181 EAIHTNPFDGVSRLRTVKTPPNPLEHDEFIRLINHPSIREQDVNLWTVAVYTGLRHGELS 240 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 ALAWED+DL K + V+R T F PKT +G RT+ LL PA EAL Q T + Sbjct: 241 ALAWEDIDLVKRTITVKRTATQQKRFRVPKTESGERTINLLAPAYEALVRQKACTFLYPS 300 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 + R+ +++ +VF + + K S + W K AGI RNPY Sbjct: 301 IAVEVESRQKRNHIQEQCTWVFRMTSYSAEAKGNISTKVISNMWRKCTKLAGIAYRNPYQ 360 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 TRHT+ACWLL +GANPAFIASQMGH MV +YG W+ N+ +IA + +L+ Sbjct: 361 TRHTYACWLLNSGANPAFIASQMGHSDMSMVISVYGAWMPSNNESEIAKIERQLN 415 >UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTD1_9BACL Length = 379 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 79/413 (19%), Positives = 147/413 (35%), Gaps = 55/413 (13%) Query: 8 VEIRGRYIRIWFMF----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 V RG GKR ++ G+ + K+A A + EI SG + Sbjct: 5 VRKRGNKWCFVIDVGRDENGKRKQKWFSGY----ATKKEAEKAMAAKLQEIVSGVYV--- 57 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI 123 T W + K +++ +T + + ++ I + Sbjct: 58 -------------AENNDTVETYLRNWLEDKRSQVRPSTYRGYEWLVRVHIIPHLGGIEL 104 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 S +R + +L +S K + RT+ + LL L A + G ++ Sbjct: 105 SDLRPQHLQALYRKL-----------QSLDKPLSNRTILHIHLLLHEALDRAVKWGMVAR 153 Query: 184 KPFEGVKKLQRNRIKPDPLSKTEFNALM---ESEKGQSQNLWKFAVYSGLRHGELAALAW 240 + V + + + + A + E + + + AV +G+R GE+ L W Sbjct: 154 NVADAVDPPRPEVRRSIVWTPEDVRAFLSANEEAEARYYAAFVLAVMTGMRKGEILGLRW 213 Query: 241 EDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 ++D + +V + + LT + PKT+ R+V L + AL+ + L R Sbjct: 214 SEIDWDSAVVRINQTLTWTKQGPILQEPKTDRSRRSVALSPETIVALRRHHALQAQERLL 273 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 T Y + VF +L W A+KRA + R + Sbjct: 274 YGTEY---------KDHDLVFA-----RPNGEPLHPRTLDNAWYRALKRANVPRIRFHDL 319 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHT A LL G +P ++ ++GH T + + Y + + + + + Sbjct: 320 RHTHASLLLAQGVHPKIVSERLGHSTINITLDTYSHVLPGLQKQVADRFDEVI 372 >UniRef50_C8VWS4 Integrase family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS4_DESAS Length = 381 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 85/411 (20%), Positives = 160/411 (38%), Gaps = 44/411 (10%) Query: 7 GVEIRGRYIRIWFMFR--GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRR 64 + RG+ I + GKR ++ G+ K+A + A ++EI G + Sbjct: 4 SIVKRGKTYSIVYDINQGGKRKQKWESGF----KTKKEAEAILAQRINEIEKGTY----- 54 Query: 65 FPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPIS 124 T + W + +L+ +T ++ + +K I + P++ Sbjct: 55 -----------INPKKDTLEDYLIRWFDTHKADLSPSTARRYEGIIKQHLIPSLGNIPLA 103 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTK 184 ++ I + ++ L G DN ++ G + +V+ +L L A IS Sbjct: 104 KLQPLQIQEFLSKELEGGR--QDNKKTVGAGLSAASVNYEYRVLHKALNQAVDWQLISRN 161 Query: 185 PFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDV 243 P + VK + + LS+ + L+ K + A+Y+G+R GE+ W+D+ Sbjct: 162 PADLVKVPKPEKKDMVVLSEQDIARLLNEIKDNYLYIPTFLAIYTGMRLGEVLGSTWKDI 221 Query: 244 DLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 DL +GI++VR+ + F PKT R + + Q ++ L+E K + Sbjct: 222 DLNRGILSVRQASCQVKADDPEFKAPKTAKSKRNIDISQTVVKTLREHKKTQTKWKLVAG 281 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 + + VC + + SL + + R G+ + + RH Sbjct: 282 SNWQDN--------------NLVCALQDGRPINPPSLSSYFRRVASRIGL-FVSFHALRH 326 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 T A LL AG P + ++GH T + +IY + M + L+ L Sbjct: 327 THASLLLKAGIQPKIVQERLGHSTIAVTMDIYSHVMPGMQRQAANKLDDML 377 >UniRef50_B6XGP6 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XGP6_9ENTR Length = 427 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 161/410 (39%), Positives = 247/410 (60%), Gaps = 6/410 (1%) Query: 3 KLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 K PTGVE+ G+ +RI F ++GKR RETL G T N K AG LR I ++I +G F+Y Sbjct: 4 KYPTGVEVHGKSLRISFTYKGKRVRETL-GIPDTPKNRKLAGELRTAICYKIKTGAFDYS 62 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 FP+S + + TFG + + W ++K E+ +T + KS + L I ++ Sbjct: 63 VEFPESKNCNEKSISNKNVTFGYVANKWVELKRIEVAVSTFEAYKSIVNVLFFFIDKNKM 122 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 I+ DIL+ RN++L T+ N R +K GR+V TV+NY+ +L + FA ++ +I Sbjct: 123 INLFNLEDILSVRNKMLTSPTIEPVN-RVSKIGRSVSTVNNYMKILNCIFCFAAENKYIE 181 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWE 241 T +K L+++R PDP++K EF L+ + + Q++N+ +VY+GLR GEL ALA+E Sbjct: 182 TNVLSSIKNLKKSRAVPDPITKEEFPRLLNATRNIQAKNMLIVSVYTGLRPGELCALAYE 241 Query: 242 DVDLEKGIVNVRRNLTILDMFGPPKTNAGI-RTVTLLQPALEALKEQYKLTGHHRKSEIT 300 D+D + + V+RN++ + F PKT + R + +L P E+L+EQ LT + Sbjct: 242 DIDFIERTITVKRNISNIGDFSLPKTPSSTDRVIHMLDPVYESLREQMSLTRMTSPEIVN 301 Query: 301 FYHREYGRTEKQKLHFVFMPRVC--NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 REYG+ + FVF P V NG + +YS W A +KR+G+R R Y TR Sbjct: 302 VEMREYGKYREDSCTFVFQPSVVARNGLETKHYSPGGFNGIWGALIKRSGVRHRKSYQTR 361 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 HT+ACW+L+AGANPAFIA+QMGH +A+M+Y++YG W+ + + +QIA++N Sbjct: 362 HTYACWMLSAGANPAFIATQMGHSSAKMIYDVYGAWMKENDKDQIAIMNR 411 >UniRef50_A8GE25 Integrase family protein n=18 Tax=Enterobacteriaceae RepID=A8GE25_SERP5 Length = 428 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 162/419 (38%), Positives = 236/419 (56%), Gaps = 13/419 (3%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 M PTGVE G +RIWF+F+GKR RE L G T N K AG LR + +EI +G F Sbjct: 1 MKAYPTGVENHGGTLRIWFLFQGKRVRENL-GIPDTPKNRKAAGELRTSVCYEIKTGNFS 59 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQL---KTLRIII 117 Y +RFP S + R T ++ W +KE E++ T+ + S + Sbjct: 60 YEKRFPNSRN-VTINAARENITVNDIIKKWLNLKEMEVSKGTLYRYTSHCGVTASYLNP- 117 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSN--KKGRTVRTVDNYIALLCSLLRFA 175 I+ IR DIL R +L + + ++GR V TV++Y+ + ++ FA Sbjct: 118 --ERKINEIRQEDILLARKRMLTEPQQPKIHEKRKSVRQGRAVPTVNSYMFCMRAIFDFA 175 Query: 176 YQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEK-GQSQNLWKFAVYSGLRHGE 234 +G+I+ PFEGV L++ R PDPL+K E+ ++ S Q +N+ A+ +GLRHGE Sbjct: 176 VSNGYIANNPFEGVSPLKKQRPAPDPLTKEEYQRVIVSCPTQQMRNMITLAINTGLRHGE 235 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 L ALAWED+D + +++ RNL++ + F PKT+AG+RT+ L A+EA+K Q LT Sbjct: 236 LYALAWEDLDTQNWTISISRNLSLKEHFTLPKTDAGMRTIQLTTVAIEAIKSQMALTRLS 295 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVC--NGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 +T REYG+ F+F PR+ NG +YS + W +++AG++ R Sbjct: 296 NAHRVTVNLREYGKKRTDDCTFIFSPRITSRNGSSADWYSPGAFNGAWKTILRKAGVKHR 355 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 Y TRHTFACW L+ GANP F+A QMGH +AQM+Y +YG W+ + ND Q+ +LNA S Sbjct: 356 KSYETRHTFACWALSCGANPNFVAHQMGHSSAQMLYNVYGKWMTENNDHQVNILNASFS 414 >UniRef50_UPI0001826473 putative integrase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826473 Length = 431 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 172/414 (41%), Positives = 246/414 (59%), Gaps = 5/414 (1%) Query: 2 SKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEY 61 S PTGVE G +RIWF+++G R RE+L G T N K AG LRA + I +G F Y Sbjct: 4 SAYPTGVENHGGTLRIWFIYKGSRVRESL-GVPDTPKNRKVAGELRASVCFSIKTGSFNY 62 Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 +FP S + T EL + W ++K E++TN M + S + + I Sbjct: 63 AAQFPDSPNLRRFGMESKEITVLELANKWLELKRMEISTNAMSRYSSIARNMVPRIGGDR 122 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 +S + D+L R ELL G + ++ KGR+VRTV+NY+ + + FA SG++ Sbjct: 123 LVSAVTQEDLLFIRKELLTGYHVLKTGQKTPVKGRSVRTVNNYMRTMSGMFNFAADSGYV 182 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAW 240 PF G+ L+R R +PDPL++ EF ++ + Q +N+W AVY+G+RHGEL ALAW Sbjct: 183 KANPFNGISLLKRARTEPDPLTREEFIRMINACTHQQLKNMWSLAVYTGVRHGELVALAW 242 Query: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGI-RTVTLLQPALEALKEQYKLTGHHRKSEI 299 ED+DL+ G + +RRN T+ F PKT AG R + L+QPA++ LK Q ++T ++ +I Sbjct: 243 EDIDLKAGTMIIRRNHTLTKEFTLPKTEAGTDRIINLIQPAIDVLKSQAEMTRLGKQHQI 302 Query: 300 TFYHREYGRTEKQKLHFVFMPRVC--NGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 REYGR+ FVF P++ N +Y+V S+ W +A++RAGIR R Y + Sbjct: 303 EVKLREYGRSVAHPCTFVFNPQIVSRNSLAGNHYAVGSINQSWESAMRRAGIRYRKAYQS 362 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT+ACW L AGANP FIA QMGH AQMVY +YG W+ + N +Q+ +LN +LS Sbjct: 363 RHTYACWSLAAGANPNFIAKQMGHTDAQMVYRVYGSWMAENNQDQVLILNQKLS 416 >UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_MOOTA Length = 390 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 81/401 (20%), Positives = 146/401 (36%), Gaps = 53/401 (13%) Query: 15 IRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKM 74 I + GK+ R TL G + K+ +++ +G F Sbjct: 24 ITVGIDHEGKQRRLTLYG-----KSKKEVLEKLTQALYQQQNGGF--------------- 63 Query: 75 VTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 T + + W + L +T + ++ L+ I S P+ ++ +DI Sbjct: 64 -IEPSKITVEQWLNRWLTDYAKPHLRQSTWESYETVLRLHVIPTLGSIPLKKLQPADIQR 122 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 L + G + V +L + A +SG + P E K + Sbjct: 123 LYASKL-------------ESGLSPTRVRYIHVVLHEAMSQARESGLLLQNPTEAAKPPR 169 Query: 194 RNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 + K PL+ + +E+ K + A+ +GLR GE+ L W+D+DL+KGI+ V Sbjct: 170 HPKKKVQPLNPEQVKRFLETAKQDPLYPAFLLALGTGLRRGEILGLRWQDLDLQKGILQV 229 Query: 253 RRNLTILDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 R++L F PKT R + L + ALK ++ Y Sbjct: 230 RQSLIRTREGLKFEEPKTEKSRRQIPLPPSVVAALKRHKAWVNQNKLILGPDY------- 282 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 + VF + +N + +AG+ + RHT A LL G Sbjct: 283 --EDHDLVFPV-----ENGRPRDPKGFAEYFNRLLDKAGLPHIRLHDLRHTHATLLLLEG 335 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 +P + ++GH T + +IY + + ++ ++ L Sbjct: 336 VHPKVVQERLGHSTVSITLDIYSHILPGLQEKAAERIDGLL 376 >UniRef50_B0KAZ5 Phage integrase family protein n=3 Tax=Thermoanaerobacter RepID=B0KAZ5_THEP3 Length = 403 Score = 364 bits (936), Expect = 3e-99, Method: Composition-based stats. Identities = 82/420 (19%), Positives = 150/420 (35%), Gaps = 50/420 (11%) Query: 10 IRGRYIRIWFMF----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 I+G+ +I F GKR I N +A A + E ++G Sbjct: 12 IKGKKYKISFYIGTDGNGKRK---YYIETIECKNKAEAQKYLAKKIVEYDTGTL------ 62 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISH 125 T + W + K++ L T + +++ + + Sbjct: 63 ---------PIDETNITVKDYLKKWLETKKSSLALKTYNDYEQKIRLYINPAIGNYKLLK 113 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 + I N N +L ++G + RT+ +L L+ A + + P Sbjct: 114 LTPLIIQNMYNNML-------------EQGLSARTIRYTHTVLNEALKQAIKWQMLRYNP 160 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAWEDVD 244 +G ++ + + L+ + +E+ + L++ + SG+R E L WED+D Sbjct: 161 CDGTTLPKQAKKEMKVLTPEQAKKFLEACVYNRWGILFELLLISGMRPSEALGLKWEDID 220 Query: 245 LEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT- 300 + + V+R LT + PKT RT+ L + + LKE K + Sbjct: 221 WKNNRIAVQRTLTRVKNNWQLKEPKTPQSRRTIPLPREVMNDLKEHRKQQSKEKLKAKEY 280 Query: 301 ---------FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA-RWNAAVKRAGIR 350 F E+ K +V V + ++++ + +K AG+ Sbjct: 281 INYDKDKNKFKPEEWEEKLKDPKVYVDYGLVFATETGRPLDLANINYQYFKPLLKNAGLP 340 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 Y RHT A LL AG NP ++ ++GH + + Y + M +E L L Sbjct: 341 NIRLYDLRHTCATLLLLAGENPKVVSERLGHANITLTLDTYSHVLPTMQEEATQKLKQML 400 >UniRef50_B7DTQ3 Integrase family protein n=2 Tax=Bacillales RepID=B7DTQ3_9BACL Length = 392 Score = 364 bits (934), Expect = 5e-99, Method: Composition-based stats. Identities = 73/412 (17%), Positives = 151/412 (36%), Gaps = 53/412 (12%) Query: 8 VEIRGRYI----RIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + RG + + +GK+ + G+ + A A +V +++ G + Sbjct: 15 IRKRGNSWSVVVYLGYDEQGKKRYKWHGGF----KTKRDAERFLATLVEQVHDGTYV--- 67 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI 123 KT G W K T++ T++ ++ I + Sbjct: 68 -------------EPSKKTVGAYLREWLDDKRTKVRPGTLRSYVWLVEHHIIPRIGQLEL 114 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 + +R S I +L G+ + + R+V + +L L A + G I+ Sbjct: 115 AKLRPSHIQKLYTDLQTGD-----------EHISKRSVLHAHRILHQALDRAVKWGLITR 163 Query: 184 KPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWED 242 + V+ + R + + + +A +++ + + + +G+R GE+ AL WED Sbjct: 164 NVTDAVEPPRPARQEMRVWTDEQLDAFLQAARKSRYYVAFVLLSSTGMRVGEVLALRWED 223 Query: 243 VDLEKGIVNVRRNLTILDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 VDL+ G+V V R+ + PKT +G R++ L ++ L++ R Sbjct: 224 VDLQAGLVRVVRSYSYTGKGYRIEEPKTESGRRSIALPPAVVDLLRKHKTEQAARRLMVG 283 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 + + + V +L ++ ++R G+ R + RH Sbjct: 284 SAW---------EDNDLVICTAF-----GKPILQHNLRTSFHRIIERTGLPRIRLHDLRH 329 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 T A LL G +P + ++GH + Y + + + ++ S Sbjct: 330 THATILLQRGVHPKVVQERLGHSDITLTLNTYSHVVPGLQEAAARSIDDLFS 381 >UniRef50_D1CFY4 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFY4_THET1 Length = 363 Score = 349 bits (897), Expect = 9e-95, Method: Composition-based stats. Identities = 83/401 (20%), Positives = 157/401 (39%), Gaps = 52/401 (12%) Query: 1 MSKLPTG-VEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEF 59 MS G + RG R G R IT + R ++ + G Sbjct: 1 MSAAGEGKIIKRGNAYRAQVQINGVRH-------SITGKTRAEVQRKRRELLAAADQG-- 51 Query: 60 EYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 ++ R T E W +I + ++ T+ ++ ++ + Sbjct: 52 --------------IMPARTRVTVAEFLSHWLEIIKPQVRPATLADYQNSVRNHIVPALG 97 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + ++ + + + ++LL KG + +TV N + ++ A + G Sbjct: 98 TIKLTKLEPAHLQELYSQLLA-------------KGLSAKTVRNIHGTIHKAIKDAARWG 144 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAAL 238 + + + + +R + L+ + LM++ G + + L A+ +G R GEL L Sbjct: 145 MLPRNVADIARPPKVSRQELQCLTPEQVRLLMQACAGTRYEPLLGLAIATGARQGELLGL 204 Query: 239 AWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 W D+DL++G+V + R LT F PKT++G R+V + +E L+ L R S Sbjct: 205 RWADIDLQRGVVQITRQLTRQGTFSEPKTSSGKRSVHVPVSTVELLRRHRSLQLQERLSA 264 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 + Q VF + +L W+ +++AG+ R + R Sbjct: 265 GDRW---------QDQGLVFANTL-----GGPMDARNLIRAWHRILQQAGLPRMPFHSLR 310 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN 399 HT A LL G +P I ++GH + ++Y ++DM+ Sbjct: 311 HTSASLLLRQGVSPRLIQQRLGHADIAVTLQVYAHLVEDMD 351 >UniRef50_A7MYL9 Putative uncharacterized protein n=3 Tax=Vibrio harveyi group RepID=A7MYL9_VIBHB Length = 411 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 167/412 (40%), Positives = 233/412 (56%), Gaps = 12/412 (2%) Query: 5 PTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRR 64 P GVEIRG+ IRI F +R RCRETLKGWE+T N+KKA LRA I+ EI+ G F+YL R Sbjct: 4 PEGVEIRGKSIRISFTYREMRCRETLKGWEVTKGNLKKASQLRASILSEISLGTFDYLSR 63 Query: 65 FPQSSTGAKMVTTR---VIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 FP S T T EL D + ++K+T + + ++ + + + I E Sbjct: 64 FPTSKKAQLFATPEQRGKNLTVRELFDDYIQLKKTTMASQSLYVLNNTARACCLFIGEER 123 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 IS+I D L + ++ P N + R+ +T++N I L+ A +S FI Sbjct: 124 TISNITIMDALKCQKLMVDS-------PTRNGRPRSAKTINNMIKLMRRCFDLAVKSKFI 176 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAW 240 PF V+ L +PDPL EF+ L+ES Q +N++ A+Y+G+R GEL ALAW Sbjct: 177 DDNPFLHVELLSGGSGEPDPLELEEFHQLIESTTNLQQRNIFTLAIYTGMRTGELCALAW 236 Query: 241 EDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 EDVDLEKG + V RN+TI F PK RT+ LLQPAL ALK Q KLT +I Sbjct: 237 EDVDLEKGTIEVTRNVTIERKFTTPKNKKSERTIHLLQPALLALKSQRKLTMLGPVRDIL 296 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNG-KQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 + ++ + FVF+P NG + Y ++ W+ A+KRAGIR R Y +RH Sbjct: 297 VEVKGSNTFRQESVQFVFIPEHRNGQETSETYKTTTYNRLWSRALKRAGIRHRCSYQSRH 356 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 T+ACWL+T GAN +FIA QMGH++ M+ +YG ++ + EQI LN ++ Sbjct: 357 TYACWLITKGANLSFIAEQMGHKSTMMLERVYGRFMKSHSHEQIEYLNGIMA 408 >UniRef50_A2P3A8 Integrase n=3 Tax=Vibrionaceae RepID=A2P3A8_VIBCH Length = 412 Score = 347 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 173/413 (41%), Positives = 229/413 (55%), Gaps = 23/413 (5%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 MS LPTGVEI +RIWFM++GKR RE+LK T NIK A + R I H I +G+F Sbjct: 1 MSALPTGVEIHAGQLRIWFMYKGKRQRESLK-CPPTPKNIKLAASRRTAICHAIQTGQFI 59 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Y FP+S + + T EL D W +K E+T T+K + ++K + + E+ Sbjct: 60 YKEWFPESKKANQYS-DKKDITIKELFDRWLDLKVIEVTPATIKNYQQRVKQVYWHLPET 118 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 T +S + +L R + T + Y+ L + FA SG+ Sbjct: 119 TLVSEVTQEKLLELRKRFTET--------------CSPSTANTYMRTLKGIFSFAINSGY 164 Query: 181 ISTKPF--EGVKKLQRNRIKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAA 237 + P G+K+L+ + KP PLS+ EF ++E Q N W AVY+GLRHGEL A Sbjct: 165 --SDPALLNGIKELKTQKRKPQPLSEEEFQRVIEHCQHEQDANFWTVAVYTGLRHGELMA 222 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 LAWED+DLE G + VRRNLT+ F PKT +G RTV LL PAL ALK Q K T + Sbjct: 223 LAWEDIDLENGTITVRRNLTLEGRFKLPKTISGERTVNLLNPALAALKAQMKWTFMLPEL 282 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGK--QKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 EI REYG+ ++Q + VF P V YY S+ +WN KRA + R PY Sbjct: 283 EIDVLQREYGKLQRQFIRPVFSPSVTARYEVDNRYYHHVSIWEKWNMLCKRAKLTYRKPY 342 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 TRHT+ACW+L+AGANP FIA QMGH +A+ VY+ YG W+ D Q+ MLNA Sbjct: 343 QTRHTYACWMLSAGANPTFIAKQMGHSSAKEVYQTYGDWVGDHTKGQLDMLNA 395 >UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBE5_AMMDK Length = 414 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 84/404 (20%), Positives = 157/404 (38%), Gaps = 60/404 (14%) Query: 19 FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTR 78 + G+ R++ ++A +H+ + G T Sbjct: 57 YDADGRPVRKSFY-----ARTREEAVKKLTQALHQASLGVL----------------TAP 95 Query: 79 VIKTFGELCDIWTKIKET-ELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNE 137 T GE W + + +L T+ ++ ++ + S P+ + + + N Sbjct: 96 ARLTLGEWLATWLETYKKGKLRPTTLANYETVIRAYILPSLGSVPLRSVTPASLQALYNS 155 Query: 138 LLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ-RNR 196 L +G + RTV +L + L+ A ++G + P E + + + R Sbjct: 156 LSA-------------RGLSARTVRLVHVVLNACLKQAVKNGLLVRNPAEATEPPKLKRR 202 Query: 197 IKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 + PL++ E A +++ +G + + A+ +GLR GE+ L WEDVDLE+G++ VRR+ Sbjct: 203 VPVRPLAREEVEAFLKAARGERLYPAFALALKTGLRRGEVLGLKWEDVDLERGVLRVRRS 262 Query: 256 LTILD---------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 L +F PKT RTV L + + LK + Y Sbjct: 263 LVEAKDPETGKVRLVFQEPKTEKSRRTVPLTRDVVALLKSHKARQNEEKLYFGEAY---- 318 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 + VF + + +++ +K+AG+ R + RHTFA LL Sbjct: 319 -----EDNGLVFCTEL-----GKPIWPRNFLRAFHSVLKKAGLERHRFHALRHTFATLLL 368 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 +G + +GHE ++Y ++D + + L+A L Sbjct: 369 ASGEELKNVQELLGHERISTTADVYAEVLEDAKKKAVTRLDAFL 412 >UniRef50_B0KAT2 Phage integrase family protein n=7 Tax=Clostridia RepID=B0KAT2_THEP3 Length = 373 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 79/414 (19%), Positives = 153/414 (36%), Gaps = 55/414 (13%) Query: 8 VEIRGRYIRIWFMF----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + RG I GKR ++ + G+ K+A A I+ +I EF Sbjct: 5 IRKRGSTYSIVVDVGRDENGKRKQKWISGF----KTKKEAEKALAEIIAKIEKNEF---- 56 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 T + + W KI E + T+ KS + I Sbjct: 57 ------------IEPSKITLQQFINEWLKIYGEPKWAPKTLVSNKSLIDNYIIPNLGHIE 104 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + ++ +I + N L +K + T++ LL +L+FA + +I+ Sbjct: 105 LQKLKPVEIQKFYNSL-------------KEKQLSNTTINYVHRLLNQVLKFAVKWQYIA 151 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWE 241 P E V+ ++++ + + + K + A+Y+GLR GE+ L WE Sbjct: 152 KNPCELVEAPKKDKKEFVTWNFEHVKKAKKIFKDTPIYIHVMIALYTGLRLGEICGLRWE 211 Query: 242 DVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 D+D + + VRR +D +F PKT +++ ++ LK++ ++ Sbjct: 212 DIDFKNQTITVRRTAQRIDGRFIFKEPKTETSKGIISIPDFLVQILKQEKNKQLQNKLIF 271 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKR-AGIRRRNPYHT 357 Y EY + + + + ++ +K+ + I + Sbjct: 272 GEKYITEYE------------GFISVWEDGRFKEPDYVTKKFRKILKKQSDIPVIRFHDL 319 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A +L +G + I+ ++ H + Y +M+ E + L + LS Sbjct: 320 RHTHATLMLRSGVDLKIISKRLRHGRISTTADFYSHVDLEMDREALRKLESNLS 373 >UniRef50_C2RY84 Prophage LambdaBa04, site-specific recombinase, phage integrase n=4 Tax=Bacillus cereus group RepID=C2RY84_BACCE Length = 378 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 76/414 (18%), Positives = 145/414 (35%), Gaps = 59/414 (14%) Query: 9 EIRGRYIRIWFMF-----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 RG GKR ++T+ G+ K+A ++H+ N+G Sbjct: 6 RKRGEKWSFTIDIGRDPLTGKRKQKTVSGF----KTKKEAERACNELIHQFNTGSLV--- 58 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTP 122 T E W + + + T + + + I + S Sbjct: 59 -------------DDKNLTLSEYLQEWLENTAKQRVRDTTFINYRRAVNSRIIPVIGSHK 105 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + ++ + L+ E + + ++ +L L A + + Sbjct: 106 LKDLKPLHGQRFVKSLIDEE-------------LSPKYIEYIFIVLKGALEDAVKWELLY 152 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALA 239 PFE V+ + ++ + S E + K +L+ A+ +G+R GEL L Sbjct: 153 KNPFEHVEIPRPRKVVNNTWSIEETKTFLTYAKFDNPIYYHLFLLALNTGMRRGELLGLK 212 Query: 240 WEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 W++VDL +G V+V L + F PKT+ R +++ Q + LK + Sbjct: 213 WKNVDLVEGKVSVTETLIYDELGFRFTEPKTSGSKRLISIDQSLCKELKSYKAKQNEFKL 272 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 + Y + VF + + +L + +K A + + + Sbjct: 273 AIGKAY---------EDNDLVF-----SREDGRPIYPRTLTTVFERFIKTAQVPKIRFHD 318 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHT A LL G NP ++ ++GH + + + Y DM + L+ L Sbjct: 319 LRHTHATLLLKLGINPKIVSERLGHNSIKTTLDTYSHVTLDMQESATIALSEAL 372 >UniRef50_B9MR26 Integrase family protein n=2 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MR26_ANATD Length = 400 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 81/426 (19%), Positives = 151/426 (35%), Gaps = 55/426 (12%) Query: 4 LPTGVEIRGRY-IRIWFMFRGKRCRETLKGWEITNSNIKKA--GNLRALIVHEINSGEFE 60 +PT + RG I+ G C + G + ++ G R + +I Sbjct: 1 MPTKTKKRGNNEGSIYKRKDGLWCGQITIGRDENGRQKRQYFYGKTRQEVAEKIAK---- 56 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICE 119 + + T + + W + K+ L +T K ++ Sbjct: 57 -----TLNDLANGVYVDPAKTTLKDWLNTWLWEYKKQTLRPSTFKDYLCYIERHINPAIG 111 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + +R + N ++G ++ T+ +L S L A ++G Sbjct: 112 HYKLKDLRPEHLQALYN-------------AKYQEGLSISTIKQIHTVLHSALDQALKNG 158 Query: 180 FISTKPFEGVKKLQ-RNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAA 237 ++ E + + + + LS E + + +G + + + + SGLR GEL A Sbjct: 159 LVNRNVSEATTLPKGKPKREIRILSLEEQQRFIAALEGERLKTAFLVELASGLRIGELLA 218 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMF------------GPPKTNAGIRTVTLLQPALEALK 285 L W+DV+ + G + VRR+L + +F PKT AG R V L +E LK Sbjct: 219 LRWKDVNFKDGYIEVRRSLQRVRIFDGGNSKKTALAFQEPKTEAGKRIVPLPPVIIEELK 278 Query: 286 EQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVK 345 + K + Y + VF + + + + Sbjct: 279 QHRKKQLEEKLKAGALY---------EDNDLVFATELGT-----PIDPRNFERLFYRIRE 324 Query: 346 RAGIRR-RNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIA 404 +AG+ + N + RHT+A LL A +P + +GH+ IY + ++ Sbjct: 325 KAGLDKSVNFHALRHTYATRLLEANEHPKVVQELLGHKDISTTLNIYSHVMPEIKKAAAM 384 Query: 405 MLNARL 410 LN+ Sbjct: 385 KLNSLF 390 >UniRef50_A4AD26 Prophage integrase n=5 Tax=Gammaproteobacteria RepID=A4AD26_9GAMM Length = 399 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 99/411 (24%), Positives = 163/411 (39%), Gaps = 41/411 (9%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 V RG + F +RG RCRE E +N K+ ++ + EI G F+Y FP Sbjct: 3 SVNARGNKLFFDFRYRGVRCRE-YTHLEDKPANRKRMKDILQRVESEIVLGTFDYAAYFP 61 Query: 67 QSSTGAKMVT--------TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 +S A+ + TF D W + + + + L I Sbjct: 62 ESPNAARFADHDKQIEQRSAKTPTFKAFADQWMEENRIGWKPSYINTLEHSLSKHVIPAF 121 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 S P+S I DIL +RN+L + G + ++ + L ++R A Sbjct: 122 GSVPMSAISKEDILAFRNQLA------RIPRKDGSVGLSAARINTVMVPLRQIMREA-SE 174 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAAL 238 F P++G+K L+ R K +P + E A+++ + ++G+R GE+ L Sbjct: 175 RFGFDNPYQGIKLLKVPRTKVEPFTLDEVKAVLDGVREDFHAYMTVRFFTGMRTGEIHGL 234 Query: 239 AWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 W+ +D ++ ++ VR + KT R + + ALK Q+K TG Sbjct: 235 KWKYIDFKQRMILVRESYV-AGAMTDTKTEESARDIPMSDEVYAALKAQHKRTGK----- 288 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 L VF C G +P + W + I +R PY TR Sbjct: 289 ---------------LDLVF----CTGSGEPLSINNVCKRVWYPLLALLKIPKRPPYQTR 329 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 HT A L AG NP ++A +GH + + ++ Y WI ++ + + A Sbjct: 330 HTAATLWLAAGENPLWVAQILGHSDSAITHKRYARWIPNLTRQDGSAFAAL 380 >UniRef50_Q3ABG2 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABG2_CARHZ Length = 371 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 80/412 (19%), Positives = 151/412 (36%), Gaps = 57/412 (13%) Query: 8 VEIRGRYIRIWFMF----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + RG Y + GK+ + + G+ K+A + A +++++ + F + Sbjct: 5 IRKRGNYYSVVLYLGKDENGKKKYKWIGGF----KTKKEAEKVLAEMINKVETNNFIF-- 58 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 T E + W + L+ T ++ + I ++ Sbjct: 59 --------------PEKITLKEFLNYWLENYVRPNLSPTTAYGYEAIINLHIIPFFKNIE 104 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + +R DI Y N + +T+ + +L FA + I Sbjct: 105 LQKVRPIDIQQYYNSKRDE--------------LSGKTLLQHHRILHKAFDFAMKLQLIP 150 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWE 241 P + V + + K L E L+ + K + A+ GLR GEL AL WE Sbjct: 151 NNPIDFVDSPKAKKYKAKILDLKEIKTLLNALKDTDLEVPINLALSLGLRRGELLALKWE 210 Query: 242 DVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 DV+ E+G + +RRNL + PK+ IRT+ L + L LK K + Sbjct: 211 DVNWEEGTIQIRRNLVRAGTKLILKEPKSETSIRTLKLSKTLLTMLKNHRKKQIELKLML 270 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 Y +C + S+ +++ +K+ G+ + R Sbjct: 271 GNEYKD--------------TGFICCKNNGEMINPSTFSHQFSDFLKKHGLPDIRLHDLR 316 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 HT A +L + +S++GH T + ++Y + DM++E ++ + Sbjct: 317 HTNATLMLKSNIPAKIASSRLGHSTVAITLDLYSHVLTDMDEEVANKIDDII 368 >UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUQ4_RUBXD Length = 379 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 85/428 (19%), Positives = 142/428 (33%), Gaps = 68/428 (15%) Query: 1 MSKLPTG----VEIRGRYI---RIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHE 53 M K G + + + G R R+T+ G + + + Sbjct: 1 MGKRGNGEGSISRRKNGGWMGQYVVYTAEG-RKRKTVYG-----KTRAEVAKKLNKALSD 54 Query: 54 INSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWT-KIKETELTTNTMKKTKSQLKT 112 G F GE D W E + T+ K Q++ Sbjct: 55 REDGLF----------------FDAGNLKVGEYMDRWLRDSVEGNVGPRTLANYKLQVRR 98 Query: 113 LRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLL 172 + + + + + + L G +V A+L L Sbjct: 99 HIKPVLGEIQLKTLTPAHVQGLYRQKLDA-------------GLAPSSVRYIHAVLHRAL 145 Query: 173 RFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEK-GQSQNLWKFAVYSGLR 231 A + G + E V + + D L+ E +++ + + + L+ AV +G+R Sbjct: 146 TQALRWGLVPRNVSEAVDLPKLVSEEVDALTPEEARKFLDAARGDRFEALYVVAVMTGMR 205 Query: 232 HGELAALAWEDVDLEKG---IVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEA 283 GEL L W D+DL + + V R L + F PK G RT+ L A+EA Sbjct: 206 RGELLGLRWSDIDLGQNAPATLRVGRQLQRMRDGSGLKFVAPKGGKG-RTIRLPSRAVEA 264 Query: 284 LKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL-GARWNA 342 LK R Y E VF V S++ + Sbjct: 265 LKAHRARQAEERLKAGPLYRDEG---------LVFASEVGT-----PLEPSNIDRRSFKP 310 Query: 343 AVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQ 402 +K+AG+ + RHT A LL+ G NP F+ +GH ++ Y ++ M D+ Sbjct: 311 LLKKAGLPDIRFHDLRHTCATVLLSQGVNPKFVQELLGHADIKLTLGTYSHFLPSMGDQT 370 Query: 403 IAMLNARL 410 + + L Sbjct: 371 ANAMESAL 378 >UniRef50_B1VP49 Putative phage integrase n=1 Tax=Streptomyces griseus subsp. griseus NBRC 13350 RepID=B1VP49_STRGG Length = 423 Score = 340 bits (872), Expect = 7e-92, Method: Composition-based stats. Identities = 85/423 (20%), Positives = 136/423 (32%), Gaps = 39/423 (9%) Query: 9 EIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKA-GNLRALIVHEINSGEFEYLRRFPQ 67 I G+ K A G R + ++ Q Sbjct: 4 RRANGEGTITKRKDGRYQAAAYVFRPDGTRTRKFAYGKTREEVASQLTE---------MQ 54 Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIIICESTPISHI 126 T + FG+ W E L T+ + + ++ + Sbjct: 55 EMTRQGIPAASSTMAFGDYLTYWLATIAPERLKPATLNSYEGLSRLYIRPALGKKRLNRL 114 Query: 127 RYSDILNYRNELL---------------HGETLYLDNPRSNKKGRTVRTVDNYIALLCSL 171 +D+ + E + R K+ + RTV A+L S Sbjct: 115 SPADVRRFLAEFKAACLCCLRGADEERPEDKRTCCAVGRCCKRRPSARTVQYIHAVLRSA 174 Query: 172 LRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGL 230 L+ A + I+ V+ + PL E L+++ + LW V +GL Sbjct: 175 LQQAIREELIARNVARIVETPTVEPKEVRPLDAAEVRLLLKTARPHRLYALWLLLVSTGL 234 Query: 231 RHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQ 287 R GE L W DVDL G + VRRN+ + +FG PKT +RT++L + ++AL Sbjct: 235 RRGEALGLTWADVDLTAGTLRVRRNVQRIRRELIFGTPKTMRSVRTISLPKSCVQALTAH 294 Query: 288 YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA 347 +K + + G Q VF SL + A Sbjct: 295 RTQQEREQKVAGAKWQQTPG----QPAGLVFTTLT-----GRVTDPRSLNRMLTILCRDA 345 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 +RR + RHT A LL G + I +GH T M + Y + ++ Sbjct: 346 KVRRVRVHDLRHTCASLLLAQGVDARTIMETLGHSTITMTLDTYAHVMGSTLRAAAEQMD 405 Query: 408 ARL 410 L Sbjct: 406 DAL 408 >UniRef50_B7IY65 DNA integration/recombination/invertion protein n=35 Tax=Bacillus RepID=B7IY65_BACC2 Length = 369 Score = 340 bits (872), Expect = 7e-92, Method: Composition-based stats. Identities = 73/410 (17%), Positives = 140/410 (34%), Gaps = 54/410 (13%) Query: 8 VEIRGRYIRIWFMF-----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 + RG I GKR ++ G+ K+A A + E+N G F Sbjct: 5 IRKRGNKYCIVIDIGPDPETGKRRQKWFSGY----KTKKEAQADVAKKITELNEGTF--- 57 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 T + + W +IK + +T ++ + I Sbjct: 58 -------------IEPSKVTLKDYLNHWLEIKSMSIQKSTFAGYRAFINQHVIPSIGMVA 104 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + + I + KG T ++ +L S L A + IS Sbjct: 105 LHKLNVMHIQKCY-------------KTAINKGITNNSILLMHRILKSALNLAVKQNIIS 151 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWE 241 P + + ++ + ++ E + + ++ + A+ +G+R GE+ L W+ Sbjct: 152 RNPADFAEIPKKEKTSIQTWTEEEVKKFLAHSQESRYHIGYLLAITTGMRLGEVLGLRWQ 211 Query: 242 DVDLEKGIVNVRRNLTILDMFGPP-KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 D+D EK V + + + KTN+ RT+ + + ALK+ L + + Sbjct: 212 DIDFEKHTVTINQTSGHDNKIKKTAKTNSSKRTIPVPNETIVALKKHKILINKEKLRFGS 271 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 Y + + + + + A + GI+ + RHT Sbjct: 272 AYLDQ--------------DLINCNEFGRIIKRAHFRKSFIRATHKVGIKEIKFHDLRHT 317 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A LL G NP I+ ++GH M +Y + +M +E + + Sbjct: 318 HATILLKQGVNPKIISERLGHTDISMTLSVYSHVLPNMQEEAVKNFGKSI 367 >UniRef50_C3L682 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=10 Tax=Bacillus anthracis RepID=C3L682_BACAC Length = 374 Score = 339 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 73/414 (17%), Positives = 145/414 (35%), Gaps = 59/414 (14%) Query: 9 EIRGRYIRIWFMF-----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 RG GKR ++T G+ K+A ++H+ N+G + Sbjct: 6 RKRGEKWSFTIDIGKDPITGKRKQKTASGF----KTKKEAERACNELIHQFNTGSLVDDK 61 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTP 122 F T E W + + + T K + + I + S Sbjct: 62 NF----------------TLSEYLQEWLENTAKQRVRETTFTNYKRAINSRIIPVLGSHK 105 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + ++ + L+ +G + ++ +L L A + + Sbjct: 106 LKDLKPLHGQRFVKSLID-------------EGLSPAYIEYIFIVLKGSLEDAVRWELLF 152 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALA 239 PF+ V+ + ++ S E + K + +L+ A+ +G+R GE+ L Sbjct: 153 KNPFQHVEIPRPRKVVNSTWSIEETKKFLNRTKFENVIYYHLFLLALNTGMRRGEILGLK 212 Query: 240 WEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 W++ DL +G ++V L + F PKT+ R +++ Q + K + Sbjct: 213 WKNFDLNEGKISVTETLIYDENGFRFTEPKTHGSKRLISIDQNLCKEFKSYKAKQNEFKL 272 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 Y + VF + ++ +N +K+A + + + Sbjct: 273 LFGQSY---------EDNDLVFA-----KETGQPILPRTMTTTFNQFIKKADVPQIRFHD 318 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHT A LL G NP ++ ++GH + + + Y DM + + L+ L Sbjct: 319 LRHTHATILLKLGINPKIVSERLGHSSIKTTLDTYSHVTIDMQESAVLKLSEAL 372 >UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus RepID=B4BIA4_9BACI Length = 384 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 68/414 (16%), Positives = 145/414 (35%), Gaps = 60/414 (14%) Query: 10 IRGRYIRIWFMFR-------GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 I+ + +F GKR + + + +A I ++++ G + Sbjct: 8 IKEKKKGFYFRIDVGKDPVTGKRKQASFGPF----RTKTEAKKELLKIKNQVDDGSY--- 60 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKI-KETELTTNTMKKTKSQLKTLRIIICEST 121 F +S+ F + W + + T K + ++ + + Sbjct: 61 --FKESTED-----------FSMFMERWFNTSYKRTVEITTAKSREYVIRNHIMKYFQHK 107 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 I+ I DI ++ + L G + + LL A + + Sbjct: 108 KINEITTFDIDSFYVDKLDT-------------GYSGAYIRQMHNLLNQAFDQAVKWSLV 154 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAW 240 P + K + + + E N + K S + + A+++G+R GE+ L W Sbjct: 155 KVNPVKNAKPPKVKSEEKITWTVDEVNRFLNLIKDSSMEIPYLLAIFTGMRRGEVLGLKW 214 Query: 241 EDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 +DVD E + ++R+L + +F PKT R +++ Q + LK+ + ++ Sbjct: 215 DDVDFENKKIRIKRSLCFVSGKGLIFKEPKTKKSKRQISISQHVVNVLKKHKQKQEFQKE 274 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 Y + +L ++ ++ A + R + + Sbjct: 275 KLGVQYQDN--------------NLIVCTDDGKPLDPRNLLRQFYRLIEEANVPRISFHD 320 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHT A L+ G NP ++ ++GH + ++Y DD+ ++ L Sbjct: 321 LRHTHATILMQQGENPKVVSERLGHSRVGITLDLYSHVSDDLQEQAAEKFENAL 374 >UniRef50_C1XYN2 Site-specific recombinase XerD n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYN2_9DEIN Length = 387 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 84/408 (20%), Positives = 142/408 (34%), Gaps = 44/408 (10%) Query: 8 VEIR-GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 + R M GKR R K+A A ++ Sbjct: 10 IYKRADGRYEYSLMISGKRHRGY-------AKTRKEAAKKLAELL--------------- 47 Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 + G ++ T E C+ W E + T K L+ I I + + Sbjct: 48 -VAYGRNLLPDPDRITLKEFCERWLTSVEHRVKPTTHYGYKVALEKHAIPILGDIAVQRL 106 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 + + + +LL D R K + TV L + L A + G + P Sbjct: 107 QPLHLTHLYADLLKKRIHPNDPKRL--KTLSPTTVRLVHRTLHAALEDAVRWGLLPWNPA 164 Query: 187 EGVKKLQRNRIKPDPLSKTEFNALM-ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDL 245 + VK Q R + + E + E++ + L+ A+ +G+R GEL L W D+D Sbjct: 165 DRVKPPQAPRYTGEVWTPEEVWRFLAEAQHSRLYALFFLALMTGMRRGELLGLKWADIDW 224 Query: 246 EKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 ++G + VR+NLT + PKT R V + LE L++ + R + Sbjct: 225 QEGAIWVRQNLTKAGSKRVVQSPKTYRSSRPVDVSSDVLEVLQQHREQQEKDRLGIGDAW 284 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 E +VF V S+L + A +KRA ++ + R T Sbjct: 285 TDEG---------WVFTTSVGT-----PIEPSNLRREFLAIIKRAKVKEIRFHDLRDTHV 330 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 L AG +P ++ ++GH + + Y + + L Sbjct: 331 SLLALAGVDPKVVSERVGHASVAFTQQTYQHLFRAQRKKAALAVGELL 378 >UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQ70_ANATD Length = 325 Score = 337 bits (865), Expect = 5e-91, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 132/348 (37%), Gaps = 39/348 (11%) Query: 75 VTTRVIKTFGELCDIWTKI-KETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 TT TF + DIW + +L T + + ++ I Sbjct: 5 STTNFGLTFSQWLDIWMNQFMKIKLRPTTYSSYIQLINKHIKPKLGHIQLQNLSPLAIQE 64 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 N LL + + +TV N ++ S L+ A + G+I+ E V + Sbjct: 65 CYNSLLL-------------ENLSPKTVKNIHVIIHSALKQAIKCGYINQNVSEAVALPK 111 Query: 194 RNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 R + LS + +++ + S + +Y+GLR GEL L W+D+D + ++V Sbjct: 112 VERPEIKTLSSEQVTTFLQAAQTDSLYPAFLLELYTGLRRGELLGLKWDDIDFDNCTIHV 171 Query: 253 RRNLTILD---------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 +R+L + + PPKT AG R + + + LKE Y+ + S+ F Sbjct: 172 KRSLVRVYDHNLKKTTLLLQPPKTKAGYRVIPIPDFVVAELKELYEEHQRIKLSQPNF-- 229 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 L+ +F+ Q + ++ +K+A + + RHT A Sbjct: 230 --------NSLNLMFVT-----TQGTPIDPRNFERKFKQLLKKANLPNIRLHDLRHTVAT 276 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 LL +P + +GH +IY ++ + + L L+ Sbjct: 277 LLLQQNVHPKIVQEILGHRDISTTLDIYSHVNIELKKKATSCLVEILN 324 >UniRef50_D2LSV7 Integrase family protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSV7_BACS4 Length = 391 Score = 337 bits (864), Expect = 6e-91, Method: Composition-based stats. Identities = 90/420 (21%), Positives = 162/420 (38%), Gaps = 48/420 (11%) Query: 4 LPTGVEIRGR-YIRIWF----MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGE 58 + VE RG R+ GKR ++ IT N +A A V EI +GE Sbjct: 1 MAGNVENRGNNRWRLEVSLGVDQDGKRIKKRKT---ITAKNKTEAKKRLAEFVTEIEAGE 57 Query: 59 FEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIII 117 + F + W L T++ KS + I Sbjct: 58 Y----------------IDPSKMKFKDFVKEWETKYGMKHLGAKTLETYKSIINNYLIPT 101 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 + + + +I+NY + L + G + ++ + +L ++ A + Sbjct: 102 FGNKKLDEFKPINIINYLDCLGEDNARKDG----KEGGLSSSSIKYHYRVLRNIFSRAKE 157 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG---QSQNLWKFAVYSGLRHGE 234 I P E VK + + K +K E L+E K + + A+ +GLR GE Sbjct: 158 WIIIKNNPVESVKPPKVTQEKTSVYTKDEVIELLELLKNEPIHQKLMVTAALMAGLRRGE 217 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKL 290 + L W+D+DL+ G +++ +L + GPPK N+ IR V++ +E K+ + Sbjct: 218 ILGLQWDDIDLDAGTISINHSLQYTKEKGYVLGPPKNNSSIRKVSIPMYLVEEFKKYKRT 277 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 R + E K +VF + +++G W +KR G + Sbjct: 278 KSKERIQAAELW-------EGGKYFYVFSS-----WNGKPFYPTAVGTWWRRFLKRKGFK 325 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RHT A L+ G + I++++GH + IYG ++ + +++ LN+ Sbjct: 326 YIRFHDLRHTAATLLINEGEHAKTISARLGHADIKTTMNIYGHYLREADEKAANKLNSIF 385 >UniRef50_A8MGP9 Integrase family protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGP9_ALKOO Length = 369 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 75/413 (18%), Positives = 142/413 (34%), Gaps = 56/413 (13%) Query: 7 GVEIRGRYIRI---WFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + + I GKR R+ + G+ K+A I+ ++N+ F Sbjct: 4 SIVKKNHKWYIVVDSIDENGKRKRKWISGFN----TQKEAEKKLPEILQQLNTNTFV--- 56 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 T + +W + + + T K I + Sbjct: 57 -------------DTNNITLRDYMQLWLEDYAKPNVAPTTYDKYTYAANK-VSEILGNMK 102 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + I+ I N+L N T TV +Y +L + + A + FI Sbjct: 103 LQQIKPIHIQQLVNKL-------------NNSDVTPSTVLSYYRVLNTAINQAVKWQFIQ 149 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWE 241 P V + + K L + E L++ K + A+ GLR GE+ L WE Sbjct: 150 YNPCVAVTPPRNTKNKMMILDQDEIQILLDKSKDHVLYPVIVLALLCGLRRGEILGLQWE 209 Query: 242 DVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 ++D G++++ NL + + + KT+ G R V + +E LK+ K ++ Sbjct: 210 NIDFFSGVIHLENNLVMANNESILKETKTSTGRRAVDISSNVVEVLKKVKKQKMSYKLLY 269 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 + YH VC + + + + + A + + + R Sbjct: 270 GSSYHDS--------------NFVCTWEDGRPFRPDYIPKAFAKILVSANLPKIRFHDLR 315 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 HT A LL +G +P + ++GH + + + Y + + + S Sbjct: 316 HTHASILLKSGIHPKVVQERLGHSSISITLDTYSHLVPSLQKSAAEKMATMFS 368 >UniRef50_UPI0001BC493F putative integrase n=1 Tax=Neisseria mucosa ATCC 25996 RepID=UPI0001BC493F Length = 415 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 119/412 (28%), Positives = 186/412 (45%), Gaps = 48/412 (11%) Query: 2 SKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEY 61 ++PTGV IR R I+IWFM+RGKRC E+L + T +NI+ A LR + I G F+Y Sbjct: 4 KRIPTGVVIRDRSIKIWFMYRGKRCWESLP-LKPTTANIRHATKLREEVCTRIAIGVFDY 62 Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 FP S + T TF E+ + W +L+ +T+ + + L + + Sbjct: 63 AEFFPDSKRAEE---TERSPTFREMAEAWLATV-NQLSHSTLSRYRGMLNSHVLPKIGDM 118 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 I I+YS + L + +T +N ++ A + G I Sbjct: 119 SIDRIQYSTLAGLLATL----------------DCSAKTRNNIATVIRQPFVLALRDGRI 162 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ--SQNLWKFAVYSGLRHGELAALA 239 P + + + + PDP + E A++ K + N ++ A +SG+R EL AL Sbjct: 163 KDNPAQHLANAKVQKEPPDPFTLEEAEAILGYLKNEPVFHNYFELAFFSGMRTSELIALT 222 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 W+D+D ++ V V + ++ KT+ R + L ALEAL+ Q++ TG Sbjct: 223 WQDIDFQRQCVCVNKA-SVAGKLKSTKTH-SYRDIELNSRALEALRRQWQRTGL------ 274 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 +VF+ P+ + W A+K AG+R R PY+TRH Sbjct: 275 -------------ASGYVFINP---KTGSPFENDKVPWRPWQHAIKIAGVRYRKPYNTRH 318 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID-DMNDEQIAMLNARL 410 TFA L AGANP ++A QMGH T +M+ E Y WID + + + Sbjct: 319 TFATLNLMAGANPMWVARQMGHSTMKMLLENYSRWIDLADKQREKSKIEQLF 370 >UniRef50_D1C8V1 Integrase family protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8V1_SPHTD Length = 376 Score = 333 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 80/412 (19%), Positives = 136/412 (33%), Gaps = 57/412 (13%) Query: 7 GVEIR-GRYI--RIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + R Y R+ F +G R R++ G ++ + A + E G Sbjct: 11 SIRERPDGYWEARMTFWEQGTRRRKSFYG-----RTRQEVADKLARALVEQQYG------ 59 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKI-KETELTTNTMKKTKSQLKTLRIIICESTP 122 + +T + + W + L T + + + T Sbjct: 60 ----------LPVVSERETVKDYLERWLEDVARPSLRPRTYESYRGIITRHLTPALGRTR 109 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 ++ + + Y N+ G + RTV + A+L L A + G +S Sbjct: 110 LARLSPDQVQRYINQ-------------KQAAGLSPRTVTYHRAVLRKALNDAMRWGLVS 156 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWE 241 +++R L+ E +++ G + L+ A+ GLR GE L W+ Sbjct: 157 RNAAALAAPPKQDRPPARFLTPEEARHFLDTVAGHRLEALFTVALAVGLRQGEALGLRWD 216 Query: 242 DVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 DVDLE G + VR L + PKT RTV L AL AL+E R + Sbjct: 217 DVDLEAGTLTVRYALQRSGGALVLVEPKTQRSRRTVALPAVALRALREHRTRQLEERIAA 276 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 FVF + +L ++ AG+ + R Sbjct: 277 ----------PYWDDQGFVFTSTIGTA-----IDARNLTREFHRLRAEAGLPWLRFHDLR 321 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 H A L+ G NP + +GH + Y + + ++ L Sbjct: 322 HGCASLLMAQGVNPRVVMEILGHSQITLTLGTYSHVAPTLARDAADKIDGIL 373 >UniRef50_C8VWK7 Integrase family protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWK7_DESAS Length = 389 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 84/416 (20%), Positives = 148/416 (35%), Gaps = 50/416 (12%) Query: 8 VEIRGR-YIRIWF----MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 VE RG+ R+ GKR K E T+ ++A L + E+ G++ Sbjct: 5 VESRGKNKWRLNVPDGTGPDGKRITHR-KVVEATSE--REAKKLLDVFSAEVQKGQY--- 58 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 TF E W + K+ +L T+ + K L + + Sbjct: 59 -------------IAPSKLTFKEFSQKWLESKK-DLAPKTLYRYKEILNSRILPAMGHLK 104 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 I I+ I+ + L + + TV + LL ++ A + I Sbjct: 105 IEDIKPFHIMQFYGNLQEPGIREDGKEGT----LSPATVLYHHRLLTNIFNAAVKWQIIL 160 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALA 239 T P V+ + + K + + AL+ + + Q Q + A+ GLR GE+ L Sbjct: 161 TNPALRVEAPKAKKHKATSYEEEDTAALLSALEEQPLKFQAIVYIALGCGLRRGEIMGLE 220 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGP----PKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 W+D+DL KG + VR++ L G PK + R + + + LK+ R Sbjct: 221 WKDIDLTKGTLEVRQSSQYLPGHGTFAKSPKNESSERIIAVPTETMSLLKQHRVQQNEQR 280 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 + R+ S+ ++ +K + + Sbjct: 281 LQVGGLWQAS--------------DRLFTTWDGKPMHPDSITKWFSGFLKNNNLSPLPFH 326 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A +++ AG IAS++GH + IY ++ E +N L+ Sbjct: 327 GLRHTAASYMIKAGIPLKNIASRLGHSSPNTTLNIYAHSFKSVDAEAANKMNDILT 382 >UniRef50_A4ILC8 DNA integration/recombination/invertion protein n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ILC8_GEOTN Length = 387 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 83/418 (19%), Positives = 157/418 (37%), Gaps = 48/418 (11%) Query: 4 LPTGVEIRGRY-----IRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGE 58 + +E RG+ + F GKR + T K+A A + EI +GE Sbjct: 1 MAGSIEKRGKNSYRLVYSMGFDANGKRIKRTKTVHV---KTKKEAEKELAKFIAEIEAGE 57 Query: 59 FEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIII 117 + + + +W E +L+ T + + + T I Sbjct: 58 Y----------------IKPAKMSLSDFIQLWRDNYAEKQLSPKTFETYNNYINTRIIPQ 101 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 ++ I+ ++ + N L ET S + T++ Y +L ++ A + Sbjct: 102 LGHLQLADIKPIHLIRFLNNLKKDETRLDGKKGS----LSEATINYYRRILKNIFNRAVE 157 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG---QSQNLWKFAVYSGLRHGE 234 F+ P E + K + + K D + E L++ + + + + A+ GLR GE Sbjct: 158 WKFLQVNPAEKLPKEKEDIGKGDVYDENETRLLLKCLEKEDLKWRLYFTLALTCGLRKGE 217 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDM----FGPPKTNAGIRTVTLLQPALEALKEQYKL 290 L AL WED+DLE G + V+ +L+ PK+ R + + L LK+ + Sbjct: 218 LLALQWEDIDLESGTLYVKHSLSYTKEKGFFLKEPKSKKSKREIAIPSFVLPLLKKYKNV 277 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 ++ + E +FVF + S +W +KR +R Sbjct: 278 RLREKEKLQDEW-------EGGNYNFVFAT-----WNGKPHHHSYPRTKWERFLKRNNLR 325 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 P+ RHT A +L G N ++ ++GH + ++ ++ Y + + + Sbjct: 326 YIRPHDLRHTSATIMLNNGVNYKTVSERLGHSSTRITFDFYVHRTKEADRSAAECFDN 383 >UniRef50_A4XMZ7 Phage integrase family protein n=3 Tax=Clostridia RepID=A4XMZ7_CALS8 Length = 327 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 67/345 (19%), Positives = 131/345 (37%), Gaps = 43/345 (12%) Query: 81 KTFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELL 139 + + W + K+ L +T + +S + + + +R + N Sbjct: 1 MLVKDWLNTWLWEYKKQTLRPSTFQDYESLINNHIVPSIGHYKLKDLRPEHLQALYNS-- 58 Query: 140 HGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN-RIK 198 ++ G ++ T+ + +L S L A ++G + E + + + Sbjct: 59 -----------KHESGLSLSTIKHIHVILHSALDQALKNGLVVRNVSEATTLPKAKTKKE 107 Query: 199 PDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT 257 L+ E + + +G + + + A+ SG+R GEL AL W+ V+L++G + ++R+L Sbjct: 108 IRVLTLEEQKRFVAALEGERLKPAFLLALASGVRLGELLALKWDCVNLKEGTITIKRSLR 167 Query: 258 ILDM------------FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 + F PKT AGIRT+ + LE LKE K + + Y Sbjct: 168 RIKTYDKSLPTKTMLAFQEPKTAAGIRTIPVPPVILEELKEHRKRQLEEKLKAGSLY--- 224 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWL 365 + + VF + + + +++A + N + RHT+A L Sbjct: 225 ------EDNNLVFATELGT-----PIEPRNFLRVFYRIIEKANL-DINFHALRHTYATRL 272 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 L A +P + +GH IY + ++ LN Sbjct: 273 LEANEHPKVVQELLGHNDISTTLNIYSHVMPEIKKAAAMKLNNLF 317 >UniRef50_B1B8Q2 Phage integrase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B8Q2_CLOBO Length = 366 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 75/408 (18%), Positives = 136/408 (33%), Gaps = 51/408 (12%) Query: 8 VEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 V G + + K+ A ++++I G Sbjct: 5 VRKDGSTWSYLVYVGLNEKGKKKYKRKRGFKTKKECEAALAELINQIEKGS--------- 55 Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 + T T E + W + + + +T K+ K +K I +S + Sbjct: 56 -------IITNDKMTVKEYIEYWLETYPKNNCSPSTYKRYKFFIKD-IINYIGKHKLSKL 107 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 I + +LL + + TV +L L+ A Q I+ P Sbjct: 108 NPMIIQKFYEDLLSD------------RNISNNTVIKTHRMLHLALKHAQQWQLINNNPC 155 Query: 187 EGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDL 245 + V + + + E N ++ K + A+ +G R GEL A+ W DVDL Sbjct: 156 DLVTPPKATKQEMKYWQPDEINIYLDILKEEFLYPAIFLAIQTGCRVGELCAIKWSDVDL 215 Query: 246 EKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 + + + L +D PKT IRT+TLL+ A+ LK K + Sbjct: 216 IDKTIRIDKTLQRIDCKLALKYPKTQNSIRTITLLETAITFLKNLKKNRIEKKLKYG--- 272 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 + + V + + + + + + + + RH+ A Sbjct: 273 --------------IELDYVLCWEDGRPIDPHYISQHFPKLLDKYNLPKIRFHDLRHSHA 318 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 LL AG N I+ ++GH T + Y M E+++ + L Sbjct: 319 TLLLKAGVNAKIISKRLGHSTVAFTLDTYSHVSTKMQKEEMSKVENLL 366 >UniRef50_Q1ZMG0 Phage integrase n=2 Tax=Photobacterium RepID=Q1ZMG0_PHOAS Length = 391 Score = 327 bits (838), Expect = 7e-88, Method: Composition-based stats. Identities = 100/419 (23%), Positives = 168/419 (40%), Gaps = 46/419 (10%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 + R + I F +RG RCRE + T N K+ L I EI G FEY + F Sbjct: 2 ASINTRNGKLVIDFRYRGLRCREQTQ-LADTPHNRKRLTLLANKIEAEITLGCFEYQKYF 60 Query: 66 PQSSTGAKMV-------------TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKT 112 QS K E DIW K+ E + ++ Sbjct: 61 SQSKLCEKFRAMEHRERASSQYYNAPYSPNLAEFADIWLAEKKIEWSKGHYIDVSGVIEK 120 Query: 113 LRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLL 172 + + IS I IL +R+ L P + + +++ + L LL Sbjct: 121 YLLPAFGNQKISSITKQKILKFRSILSQV-------PGRKGEYLSSSRINHIMTPLRQLL 173 Query: 173 RFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRH 232 A + P++ +K L+ +R DP E + + + + + ++G+R Sbjct: 174 NEA-ADRYDFNSPWKNIKALKVSRTVIDPFHLDEVESFLNAVPDAYKTYYTTRFFTGMRT 232 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 GE+ L W+D+DL + V++ L+ + KT + R + L+ ++ L++ Sbjct: 233 GEIDGLQWKDIDLVNKTIKVKQALSR-NELKELKTESSYRDIDLIDRVIDVLQKHK---- 287 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 R++ FVF+ N K KP+ W + AG+R R Sbjct: 288 ---------------RSKYTTSTFVFI----NSKGKPFCYPVVSRTIWYPTLDAAGLRHR 328 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 NPY TRHT+A LL +G +P +IA QMGH T M++ +Y ++ ++ + L+ Sbjct: 329 NPYQTRHTYATLLLASGESPEWIAKQMGHSTTTMLFRVYSRFVPNLTRRDGSAFEKFLN 387 >UniRef50_Q3Z840 Site-specific recombinase, phage integrase family n=6 Tax=Bacteria RepID=Q3Z840_DEHE1 Length = 435 Score = 326 bits (837), Expect = 7e-88, Method: Composition-based stats. Identities = 67/395 (16%), Positives = 137/395 (34%), Gaps = 46/395 (11%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR + W K+A ++ ++G F + + Sbjct: 26 GKRRQ----SWHTIKGTKKEADKKLRELLTAQDNGIFV----------------KQSKLS 65 Query: 83 FGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 FGE + W + + + T T + + ++ + I Y L Sbjct: 66 FGEWLENWCRDYVKIQTTQRTFESYYQNIIGHIEPALGKVILTELTPQIIQAYYARQLEK 125 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 K G + R+V ++ L+ A + G I P + V+ + + Sbjct: 126 ------GRADGKGGLSARSVLYQHRIISKCLKQATKLGLIMRNPADAVEPPRPRKTAISV 179 Query: 202 LSKTEFNALMESEKGQSQNLWK-FAVYSGLRHGELAALAWEDVDLEKGIVNVRRN----L 256 K E L+++ + ++ +Y G+R GE AL W+D+DL++ + + Sbjct: 180 PDKDELPRLLDAFETTPYYVFYCLLLYCGMRRGEALALRWKDIDLKQDTIQIAETAFTLR 239 Query: 257 TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 + + PKT R + + L E + E F Sbjct: 240 SGEYVIKEPKTPHSRRCIDIPPTMKLLLLEYKADQTAYYAKLGV---------ELGLHDF 290 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 VF + +++ + AV++AG + + RH A +L AG +P ++ Sbjct: 291 VF-----TRPNGEPLNPNTVTHTFLKAVRKAGFDKLRLHDLRHLHATLMLQAGIHPKIVS 345 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 ++GH + + + Y + + + + + + LS Sbjct: 346 ERLGHASINITLDTYSHVMPGLQKKAVNVFDKMLS 380 >UniRef50_Q0AUP6 Phage integrase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUP6_SYNWW Length = 392 Score = 326 bits (837), Expect = 8e-88, Method: Composition-based stats. Identities = 76/407 (18%), Positives = 139/407 (34%), Gaps = 45/407 (11%) Query: 13 RYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGA 72 + + R E + + ++A I+ EI SG + L Sbjct: 12 NEWVLRYDSSDPRTGERRQHKKRFTGTKREANKYLQRILGEIESGSYSDL---------- 61 Query: 73 KMVTTRVIKTFGELCDIWTKIKET--ELTTNTMKKTKSQLKTLRIIICESTPISHIRYSD 130 T + D W T L T++ S + I +++++ + Sbjct: 62 ------GNITIKQYLDKWINAYCTPTNLQPKTIRSYTSTINNHIIPHLGRHKLNNLKAAH 115 Query: 131 ILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK 190 I +Y + T G + TV + +L L+ A ++ P V+ Sbjct: 116 IADYYALMSKSRT-------EGGAGLSPTTVLYHHRILHQALKHAVNQDYLKQNPVAKVQ 168 Query: 191 KLQRNRIKPDPLSKTEFNALME-SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 ++NR LS + L+ + Q A+ +G+R E+AAL W++VD + Sbjct: 169 PPRKNRPDIKVLSVEQARYLIARYSEEQIYLPVFLALMTGMREAEIAALRWQNVDFDNRT 228 Query: 250 VNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 ++V L + PKT R++ + + + LK++ + +R+ Y Sbjct: 229 LSVTNALQRQENRLELKEPKTKKSRRSIPVPEQVVVVLKKEKERQDCYREILGEGYDCRG 288 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVK-RAGIRR-RNPYHTRHTFACW 364 VC + Y +G +W V I + RHT A Sbjct: 289 --------------FVCAWEDGKPYDPEWIGKQWAKLVASDDKIPNGVRFHDLRHTHATI 334 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 LL+ N I ++GHE+ +IY + +L S Sbjct: 335 LLSQNINLKVIQDRLGHESIATTGDIYSHVTPGIQQVAADVLENLFS 381 >UniRef50_A8UWI5 Phage integrase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWI5_9AQUI Length = 369 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 84/407 (20%), Positives = 152/407 (37%), Gaps = 62/407 (15%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 ++ +GR + KR + ++A + A + E+N+G Sbjct: 5 SIQKKGRRYYVVIPIGHKRKWF------PAGTTKREAEKVLAEKLAELNAGSSVL----- 53 Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISH 125 F C+ W + + +T ++ + ++ + +S Sbjct: 54 -----------PPEVRFSFFCEEWLSKYAKGSVKPSTFRRYEGIIRNHFMPRFGDKKLSR 102 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 I + Y E L + TV + LL + + A G+I P Sbjct: 103 ITTGMLQGYVAERLSQ--------------VSPTTVLQEVVLLKEMFKHAQSWGYIKHNP 148 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDL 245 + +++ +R + + D L+ E L+E+ + + AV +GLR GEL L W+D+D Sbjct: 149 AQNLQRPRREKKEIDILTPEEVEFLLENTHEHYRVAFLTAVMTGLRAGELWGLKWDDIDW 208 Query: 246 EKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 + VRR L F PK+ I V + +E LK ++ Sbjct: 209 HSKQIYVRRTL-WNGEFHTPKSRHSIGKVDMPDVLVEELKLWEIRCPPNK---------- 257 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWL 365 + VF K +P + + + A++RAG+R + + RHT A Sbjct: 258 --------YNLVFPSP----KGEPSEHQNVVNRYFKPALRRAGLRVVSFHSLRHTNASIR 305 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN--DEQIAMLNARL 410 + AG N +I Q+GH + +IYG +DM+ Q +L+ L Sbjct: 306 IRAGQNIKYIQRQLGHASINTTLDIYGHLFEDMDFNRSQAQLLDGVL 352 >UniRef50_Q3Z6H5 Site-specific recombinase, phage integrase family n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z6H5_DEHE1 Length = 386 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 77/413 (18%), Positives = 141/413 (34%), Gaps = 53/413 (12%) Query: 8 VEIRGRYIRIWFMF-RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 + RG R+ + + L +E N K A ++H+ +SG F Sbjct: 5 IIKRGNSYRVKISLGKDSASGKYLSHYETVKGNKKAAEKRLNELIHQFDSGTFV------ 58 Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISH 125 T E W + L+ T++ I + PI Sbjct: 59 ----------KPGKSTMYEYMQSWLNDYCKPNLSPRTVELYSYISTKHIIPTLGNIPIVE 108 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 ++ + + + G + RTV +L L+ A ++G +S Sbjct: 109 LKPQHLQHLYADKQSF-------------GLSNRTVQIIHVVLHKALKNAVKTGLLSRNI 155 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVD 244 E V + R + +++++ L+E K L+ ++++G+R E AL W D+D Sbjct: 156 AEAVDAPKIQRHEMQVMNESDMQVLLEKAKETPYYALFYTSLFTGMRRAECLALRWSDID 215 Query: 245 LEKGIVNVRRNLTILD--------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 L V V R++ + F PKT+ R + L + L+E Y+ RK Sbjct: 216 LILCQVYVLRSMQYVQDADLGKRITFKEPKTSKSRRQIALSPSNVIILREHYQDQSELRK 275 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 + VF +S+ W +R G+ + Sbjct: 276 TL--------NLPGLTDSDLVFSHY-----DGSPLLPNSVTHAWIKLARRCGLNGIRLHD 322 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 RHT A LL G +P + ++GH + Q+ + Y + + + Sbjct: 323 ARHTHASLLLKQGVHPKIVQERLGHGSIQITLDTYSHVAPGLQQAAASKFDDI 375 >UniRef50_A5WDD8 Phage integrase family protein n=6 Tax=Proteobacteria RepID=A5WDD8_PSYWF Length = 401 Score = 324 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 98/414 (23%), Positives = 180/414 (43%), Gaps = 40/414 (9%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 + RG+ + + F + G RCRET T N KK + + EI G F Y + F Sbjct: 2 ASIRSRGKKLFVDFRYLGVRCRETTN-LIDTPENRKKLQKIIERMEAEIVLGTFNYAQYF 60 Query: 66 PQSSTGAKMVTTRVI--------KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 P+S +KM+ +F + ++W KE E +K + + + Sbjct: 61 PKSDKASKMMALNDRKECINTSMPSFKQFAELWFSEKEIEWRDTYKRKIREIIDMYLLPE 120 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 + PI I+ +++L +R+ L KK + +++ + L +L+ A + Sbjct: 121 FQGRPIDTIKKTEVLAFRSALAK------VTRGKVKKPLSAARINSIMVPLGMILKEASK 174 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAA 237 + P+E +K L+ R P + E + + +N + ++G+R E+ Sbjct: 175 -RYKFENPYEDIKSLKEPRTSIQPFTLDEVWKFINWVREDYRNYYLVRFFTGMRTSEIDG 233 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 L WE++D ++ + + + L + PPKT R + + +ALKEQ+K+T + Sbjct: 234 LTWENIDFDRREIVINQALVKGKIV-PPKTQESYRAIQMSPWVYDALKEQHKVTYKRSE- 291 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 +VF C+ +P + W+ +K G+++RN Y T Sbjct: 292 ------------------YVF----CSHTGEPLDYNNVNKRVWHPTLKALGLKKRNAYQT 329 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A L AG +P +IA QMGH T +M++ Y ++ +M + + A ++ Sbjct: 330 RHTAATLWLAAGESPEWIAYQMGHSTTKMLFNTYSRYVPNMTRQDGSAFEALVN 383 >UniRef50_C6QSP6 Integrase family protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSP6_9BACI Length = 399 Score = 323 bits (830), Expect = 5e-87, Method: Composition-based stats. Identities = 83/424 (19%), Positives = 155/424 (36%), Gaps = 59/424 (13%) Query: 6 TGVEIRGRY-----IRIWFMFRGKRCRETLK-------GWEITNSNIKKAGNLRALIVHE 53 ++ RG+ + + +GKR R T + T E Sbjct: 2 ASIQRRGKSSFLLVVEAGYDAKGKRLRRTKTIRIEDEALLKTTKKLRDYLNEELLKFKME 61 Query: 54 INSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE-TELTTNTMKKTKSQLKT 112 + +GE+ + W EL+ T+ S +K Sbjct: 62 VEAGEY----------------IAPEKMKLADFIKEWETKYAVKELSETTLNNYLSHIKN 105 Query: 113 LRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLL 172 + I I+ I+N+ +++ + KK RT++N + ++L Sbjct: 106 HILPALGHMRIDQIKPVHIVNFLDQIKRADG--------KKKPLATRTIENAYLTIRNIL 157 Query: 173 RFAYQSGFISTKPFEGVKKLQRNR---IKPDPLSKTEFNALMESEKG---QSQNLWKFAV 226 + A + I + P VKK + + + + E AL + + + A+ Sbjct: 158 QRAVEWQIIKSNPASAVKKPKSKKEAVKEVQVYDEKEVEALFRAVQNEPFHWRIFTTLAI 217 Query: 227 YSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEA 283 +GLR GEL AL W ++DLEKG++ + + + + PKT R V+L + + Sbjct: 218 AAGLRRGELLALEWSNIDLEKGVIRINKAIVKGRKRSVEKSPKTKKSNRLVSLPKSVVAE 277 Query: 284 LKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAA 343 LK + + + K++ ++F ++ ++ W Sbjct: 278 LKLYRRHWLKQKLQAGDLW--------KEEKEYLFCNI-----DGRHFYPTTPTTWWRRF 324 Query: 344 VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 KRAGIR + RHT A L+ G + IA ++GH ++ +IYG + + E Sbjct: 325 TKRAGIRYIRLHDLRHTSATLLINQGVHAKIIAERLGHSDIRVTMDIYGHALQKADHEAA 384 Query: 404 AMLN 407 L+ Sbjct: 385 NKLD 388 >UniRef50_A8L4Q7 Integrase family protein n=9 Tax=Actinomycetales RepID=A8L4Q7_FRASN Length = 477 Score = 323 bits (829), Expect = 6e-87, Method: Composition-based stats. Identities = 68/396 (17%), Positives = 134/396 (33%), Gaps = 53/396 (13%) Query: 21 FRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVI 80 GKR R+T+ G K+ + G + T Sbjct: 111 VDGKRSRKTVYG-----KTEKECREKLTKVQRAAELG----------------VNVTAER 149 Query: 81 KTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELL 139 +T W IKE + +T++ + + + + + + D+ Sbjct: 150 RTVAVWLGEWLDIKEGDGTRASTLRAYRWLINMHIVPVIGRVQLDKLTPLDVRRLVAS-- 207 Query: 140 HGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP 199 + K G + +V + +L+ + L A + ++ + VK + Sbjct: 208 -----------AKKSGLSAGSVRHVHSLIRNALAEAERLDLVARNVAKAVKAPPTPHREV 256 Query: 200 DPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI 258 L E L+E +G + + ++ + GLR GE+ L W DVDL+ ++VR+ L Sbjct: 257 RALRPEEARRLVEVLRGERLEAVFACGLMLGLRRGEILGLRWSDVDLDGATLHVRQTLQR 316 Query: 259 LDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLH 315 +D F P KT R + + + L+ R + + Sbjct: 317 VDGSLMFVPAKTERSHRRLPIPPKLVTILRRHRATQTAERTGLGDAWT---------ETG 367 Query: 316 FVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFI 375 VF + ++ R++ ++AG+ + RH FA L G + Sbjct: 368 LVFTSSIGT-----PLEPRNVNRRFDVLRRQAGLPWLRLHDLRHAFASMLFAEGVPARTV 422 Query: 376 ASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 +GH T Q+ Y + + + + L+ + Sbjct: 423 MELLGHSTIQLTMNTYTHVMPETQRDAVGRLDRIFN 458 >UniRef50_B9MP49 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MP49_ANATD Length = 373 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 74/412 (17%), Positives = 151/412 (36%), Gaps = 55/412 (13%) Query: 8 VEIRGRYIRIWFM---FRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRR 64 + +G+ I GKR ++ L G+ +A I++ I + + L + Sbjct: 5 IAKKGKKYYIVVDIGVVDGKRKQKWLGGF----ETKAEAEEALPRILNIIYQNKNKLLEQ 60 Query: 65 FPQSSTGAKMVTTRVIKTFGELCDIWTKI-KETELTTNTMKKTKSQLKTLRIIICESTPI 123 KTFGEL D+W + ++ +T + S + + Sbjct: 61 ----------------KTFGELLDLWLNTVAKNRVSLSTFQSYSSSIALHIKPFLGDVEL 104 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 + + D+ Y + + +KG + + ++ L +A + I Sbjct: 105 NKLTAMDLQKYYQHI------------TGEKGLSSTLALYHHRIIHQALDYAVRMNMIEK 152 Query: 184 KPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWED 242 P + V ++ +P + ++ + + + A+Y+G+R GE+ AL W+D Sbjct: 153 NPADYVDPPRKRSYQPSIWDEDTIKRALDIFRNTNIWVPVLLAIYTGMRIGEITALKWDD 212 Query: 243 VDLEKGIVNVRRNLTILDMFGPPK----TNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 ++LE+G + V + L ++ K + R V + +E LK+ + +++ Sbjct: 213 INLEQGYIVVSKTLMKINRQLYIKEKGENKSSYRIVAISSNVIEELKQWRRKQEQYKEKL 272 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 YH E VC + + + +++ G+ + + R Sbjct: 273 KELYHNEG--------------FVCTFEDGRVQDPKYITKVFQKTIEKHGLPKIRFHDLR 318 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 HT A LL G +P I+ ++GH T IY D+ + L Sbjct: 319 HTHASLLLKHGVDPKHISDRLGHSTITTTLNIYSHVFDEKRRKVAETFEDIL 370 >UniRef50_C9AMW3 Phage integrase n=8 Tax=Enterococcus faecium RepID=C9AMW3_ENTFC Length = 378 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 80/418 (19%), Positives = 147/418 (35%), Gaps = 62/418 (14%) Query: 7 GVEIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 GV RG+ +F G R + G + +A ++ +I+ E + Sbjct: 4 GVRKRGKRWYYYFEDINDDGSRKKVEKVGGD----TRPEAEAALRKVLSDID----ETGQ 55 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 F + T + D W K + L NT + + +K Sbjct: 56 YFLGTDTR-----------VKQYLDFWMKEYVKLNLKYNTYENYRFTIKNHINGYLGKKK 104 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY-QSGFI 181 ++ + + + N+ N KKG + +T+ ++L + L A G I Sbjct: 105 LTDLSPALLQNFIN-------------AEFKKGYSKKTMTITHSVLKNALNMAVYPWGLI 151 Query: 182 STKPFEGVKKLQRN-----RIKPDPLSKTEFNALMESEKGQSQNLWKF--AVYSGLRHGE 234 P VK + + +S +F+ ++E Y+G+R GE Sbjct: 152 KQNPMLYVKIPKYEERPTTKKDLKIISLEDFDHMLEITPEGHPFYIPLNIGFYTGMRVGE 211 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLT 291 + L W++VD G + V + + D ++G PKT++ RT+ + Q L LK+ K Sbjct: 212 VCGLTWDNVDFSNGTITVEKQMVKNDGAWVYGTPKTSSSNRTIFIGQTLLAILKKHKKQQ 271 Query: 292 GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR 351 +R Y + VC + + S + + Sbjct: 272 LENRMKYGKLY--------------IDSNAVCTKEDGGLVTPSVVKWNTRRISNALSL-S 316 Query: 352 RNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 N + RHT A LL GA I+ ++GH + + Y D M ++ + ++ Sbjct: 317 FNFHSLRHTHATLLLENGAKMKEISERLGHSRISITMDTYSHVTDKMRNQTVDIMENL 374 >UniRef50_D2BJR0 Site-specific recombinase, phage integrase family n=2 Tax=Dehalococcoides RepID=D2BJR0_DEHSV Length = 385 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 74/417 (17%), Positives = 148/417 (35%), Gaps = 52/417 (12%) Query: 8 VEIR-GRYIRIW-FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 ++ R I +M R + + + W+ A A +++ N+G F Sbjct: 5 IKKRANGTWSIVVYMGRDPKTGKKIYQWQTVKGTKSHAEKELAALINRKNNGSFV----- 59 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIKET-ELTTNTMKKTKSQLKTLRIIICESTPIS 124 T G + W + + T ++ ++ ++ Sbjct: 60 -----------KPTKTTVGTFLESWLETYASCNTAPRTFERYSQIVRLHLTPNLGRIELT 108 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTK 184 +R I Y ++ L R + G + +TV ++ +L L A + G ++ Sbjct: 109 QLRPEHIQAYYSK-------ALSGGRVSGGGLSAQTVKHHHRVLSEALNHAVKWGLLARN 161 Query: 185 PFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-------SQNLWKFAVYSGLRHGELAA 237 V + + + ++ + + L E + ++ A+++G+R GE+ A Sbjct: 162 VAMAVDPPRPEKREMHTIAPEDMSVLFEEAAKMEKNSGLPYELIFMTALHTGMRRGEILA 221 Query: 238 LAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 L W D+DL K + VR +L L + PKT R V++ LE L + + Sbjct: 222 LRWSDIDLAKSKIYVRCSLQCLKNGEIIIREPKTPGSRRLVSMTPSLLEKLIIHKESSSA 281 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 + + + VF + +++ + KRAG+ Sbjct: 282 NMILQGKTLQGD---------SLVFAHF-----DGTPINPNTVSPAFAKIAKRAGL-NLR 326 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RH+ A +LTAG +P ++ ++GH T + Y I + D L Sbjct: 327 LHDLRHSHATLMLTAGVHPKIVSERLGHSTVAFTLDTYSHVIPGLQDAAAKTFEKSL 383 >UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53_CLOPE Length = 400 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 75/416 (18%), Positives = 138/416 (33%), Gaps = 55/416 (13%) Query: 12 GRYIRIWFMFRGKRCRETLKGWE--ITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSS 69 I+ M GK + G+ T G + + ++ + Sbjct: 14 NGQGTIYKMSNGKFRGQLTIGYNENGTPKRKSFTGKTKKEVSDKMKDFYVD--------- 64 Query: 70 TGAKMVTTRVIKTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIII-CESTPISHIR 127 ++ T T + W L ++ ++ + + + +R Sbjct: 65 NNRGLLPTDDKITLSKWFYTWLFTYRIHDLKPSSFERYEGLYRNYIESSSIGKIKLMDLR 124 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 I Y N L+ E + T+ L S L A + G+I+ Sbjct: 125 THHIQAYYNSLVSEERK------------SPSTIKTINKCLKSCLNQALKEGYITKNYCT 172 Query: 188 GVKKLQ---RNRIKPDPLSKTEFNALM-ESEKGQSQNLWKFAVYSGLRHGELAALAWEDV 243 + + + + + E M E ++ L+ A+ +GLR GE+ AL W D+ Sbjct: 173 LITLPKGSESPKEIINIFTLEEQQTFMKECMNNKNGMLYILALGTGLRLGEILALKWTDI 232 Query: 244 DLEKGIVNVRRNLTILDMFGP------------PKTNAGIRTVTLLQPALEALKEQYKLT 291 + + +++ + + PKT IRTV L +E L++ K Sbjct: 233 NFKNNYIDINKAIKSTYKIDSKGNREFQIIEQQPKTKNSIRTVPLNDNLIELLQQHRKKQ 292 Query: 292 GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR 351 R S I Y + VF + N Y + S++ + + + ++ Sbjct: 293 MIDRDSNIEIYF---------DNNLVFSTPIGN-----YLNESNVRKTFKRILNKCNLKE 338 Query: 352 RNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 + RHTFA L G P + + +GH IY + D D+ I LN Sbjct: 339 LRFHDLRHTFATRLFENGVPPKTVQTILGHSDISTTLNIYTHVMKDTKDKAIDKLN 394 >UniRef50_C1CZ59 Putative Tyrosine recombinase xerC-like protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZ59_DEIDV Length = 379 Score = 320 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 69/403 (17%), Positives = 129/403 (32%), Gaps = 53/403 (13%) Query: 12 GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTG 71 G Y+ + + GK+ R +A +V E N G Sbjct: 21 GGYVTLGYGPDGKQQRRYFS-----AKTQAEAREKLQALVSERNGGCL------------ 63 Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 + T D W K+ ++ NT + + + + + I Sbjct: 64 -----SSETLTLAAYLDRWLTHKQRDVKFNTHRSYEMTARVHIKPRLGKVQLDKLTPLHI 118 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 + LL +G++ + + LL + L A + + + V Sbjct: 119 EELVSALLA-------------EGQSAKVALGCVKLLRTALTQAVRWQLVGRNVAQSVTP 165 Query: 192 LQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 + + + E + + + L+ A+ +G+R GEL L WE +++ G + Sbjct: 166 PKHTPKEMQVWTPDEASRFLAVAREHRLYALFYLALATGMRRGELLGLKWESINMLAGTL 225 Query: 251 NVRRNL-TILDMFG--PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG 307 V+ NL + PKT A RT+ L +EAL+ + + Sbjct: 226 VVQHNLIDRVSSVTLETPKTRASRRTIALSPDTVEALRAHRHSQWLEQCKAGEKW----- 280 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLT 367 Q+ VF V ++L + +A + + RHT A L+ Sbjct: 281 ----QEHGMVFPSDVGT-----LMFPANLMGAFRRLCAKARVPAIRLHDLRHTSASLLIR 331 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A P +A ++GH +Y ++ L L Sbjct: 332 ANVPPKVVADRLGHTDPGFTLRVYAHVYEEQRRAAALPLGEML 374 >UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1P6_HALOH Length = 391 Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 68/393 (17%), Positives = 139/393 (35%), Gaps = 45/393 (11%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK+ R+ G K+ + ++ +G + + Sbjct: 31 GKQKRKYFYG-----KTKKEVAKKMTELKMKLFNGTY----------------SEPSEMK 69 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 + W + +++ L +T + K + T + ++ + N+ L Sbjct: 70 LIDWLHRWIEGRKSTLAYSTYRNYKVMINNHLADDIGETKLKDLKARQVQELLNDKLEKG 129 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR-NRIKPDP 201 +Y + G + RTV + L + L A + I + V+ ++ K Sbjct: 130 KVY------GEGGLSPRTVKYIYSTLHTALEQAVKENMIPRNICKAVEVPKKQEEKKLHT 183 Query: 202 LSKTEFNALMESEKGQSQNLW-KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 +K + N +++ + + A+ +G+R GEL L W+D+D+EK + V+R L D Sbjct: 184 WNKKQVNIFLKAARDYKYFILHYLALNTGMRRGELLGLQWKDIDMEKKRIEVKRQLARTD 243 Query: 261 ---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 +F KT +G RT+ + + LK G R + Y+++ Sbjct: 244 EGLIFKKVKTKSGNRTIPITDNVVRELKRHQIKQGEKRLALGEAYNKK------------ 291 Query: 318 FMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 V + +L + ++ G+ + RHTFA L A + Sbjct: 292 -ADLVASNGIGNPIDPRNLVRDFKDIIEETGLPEIRYHDLRHTFATLFLEAKGPIKTLQQ 350 Query: 378 QMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 +GH + + + Y ++M E + Sbjct: 351 ILGHSSITVTIDTYSHVTEEMLIEAERKMETMF 383 >UniRef50_C5T6H4 Integrase family protein n=2 Tax=Burkholderiales RepID=C5T6H4_ACIDE Length = 501 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 101/438 (23%), Positives = 172/438 (39%), Gaps = 64/438 (14%) Query: 6 TGVEIR--GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + R + F F+G RCRE T +N KK + A I EI +G F Y Sbjct: 2 PSIRSRADNGLLFFDFRFQGDRCREQT-LLSDTPANRKKLEKVLAKIEAEIAAGTFVYAN 60 Query: 64 RFPQSSTGAKMVT----------------------------TRVIKT--FGELCDIWTKI 93 FP S A++ T F W + Sbjct: 61 YFPNSKALARLEKAAGQAVQIAVAPVGVEAQHTAGPLKVEAEPASPTPPFSTFALQWVEE 120 Query: 94 KETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNK 153 + E + ++ S L I + +S I SDIL +R L R +K Sbjct: 121 HKIEWRRSHLRSLMSTLNGRLIPHFKEKAVSQITKSDILTFRATLAK------VKGRGDK 174 Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES 213 +G + + ++ I L ++ A F T P GVK+L+ + DP S + +++ + Sbjct: 175 EGLSPKRINEIIGTLGQIMDEA-ADRFEFTSPMTGVKRLRVRKTDVDPFSLADVQSILTT 233 Query: 214 EKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRT 273 + ++ + ++G+R GE+ L W VD E+ ++ VR L KT+ R Sbjct: 234 VRADYRDYFTTRFFTGMRTGEVHGLKWRYVDFERRLILVRETFV-LGEDEYTKTDGSQRD 292 Query: 274 VTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSV 333 + + QP +AL Q + TG +VF CN +P + Sbjct: 293 IQMSQPVFDALLRQREATGKL-------------------SDYVF----CNMAGQPLDNK 329 Query: 334 SSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGM 393 + W ++ G+ R PY RHT A L +G P +IA Q+GH + +M++ +Y Sbjct: 330 NFSDRVWYPLLRHLGLTERRPYQMRHTAATLWLASGEAPEWIARQLGHTSTEMLFRVYSR 389 Query: 394 WIDDMNDEQIAMLNARLS 411 ++ ++ + + + L+ Sbjct: 390 YVPNLTRQDGSAMERLLA 407 >UniRef50_A8T0M8 Putative integrase n=1 Tax=Vibrio sp. AND4 RepID=A8T0M8_9VIBR Length = 407 Score = 318 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 128/414 (30%), Positives = 200/414 (48%), Gaps = 26/414 (6%) Query: 3 KLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 KLP GVEI G+ +R+ F+++GKR RETL G T N++ A R I++EI G F Y Sbjct: 8 KLPAGVEIHGKSLRLDFVYKGKRRRETL-GLSPTKQNVRFAAQKRETIMYEIKIGIFRYA 66 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 FP S + +R TFGE+ D + ++K+ +L ++T KK S K + + Sbjct: 67 AHFPDSPYATEQSQSR---TFGEMVDKYLQLKQADLRSSTYKKYVSLFKITKNAYGANRS 123 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 S + + R L+ KGR RT++ Y + + + ++ G++ Sbjct: 124 CSTLSPESVSELRALLI--------------KGRGARTLNTYFRAINTFFGWLHKMGYVD 169 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAWE 241 E + ++ +P + E N +++ + Q +N+ Y+GLR GE+ LAWE Sbjct: 170 RNFSEFMPSVKTPERNINPFTIDEINKALDACMQEQHKNMITLLAYTGLRTGEICGLAWE 229 Query: 242 DVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 DVD E ++ +RR PKT+ RTV L+ PALEAL+ Q KL+ H+ + E Sbjct: 230 DVDFENKVLTIRRATFESRGLKTPKTDR-ERTVDLMPPALEALQAQKKLSSHYPQKEHEV 288 Query: 302 YHREYGRTEKQKLHFVFMPRVCNGKQKP----YYSVSSLGARWNAAVKRAGIRRRNPYHT 357 + + FVF P+ Y+S ++ W RAGI RN Y Sbjct: 289 ELAD-KTIRLDNIRFVFNPKATENLNAKTPYDYFSKTAPNKMWRNICIRAGIPYRNVYQL 347 Query: 358 RHTFACWLLT-AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHT+A W+L+ A N A++A QMGH M+ +YG W+ + N + L Sbjct: 348 RHTYASWMLSYANVNIAYLAQQMGHSNFLMIASVYGKWMKNKNASESEKAWEAL 401 >UniRef50_B8I354 Integrase family protein n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I354_CLOCE Length = 413 Score = 318 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 64/384 (16%), Positives = 132/384 (34%), Gaps = 29/384 (7%) Query: 36 TNSNI-KKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK 94 T K+ L E+ SG + T E ++W K Sbjct: 40 TEKQREKELQKQVVLFEEEVKSGSY----------------YEPTKMTMSEFIELWLDKK 83 Query: 95 ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKK 154 + + + T + LK + + T I ++ ++N+ L Sbjct: 84 KNNIESKTHQGYSGLLKGRVLKVMGDTKIIDLKPLHLINFYENLQELGIREDGREGK--- 140 Query: 155 GRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE 214 + ++ +Y L ++ + G I P V+ + + + L + + L+ + Sbjct: 141 -LSTNSILHYHRALNAMFGDGVRWGLIKENPCSKVRPPKVVKKEMSCLDEDQIPQLISAL 199 Query: 215 ---KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL----DMFGPPKT 267 + +GLR GEL L W++V+L+ + V + ++ + PKT Sbjct: 200 CNEPIDISTFITLDLVTGLRRGELCGLQWDNVNLKDNTIVVEQAVSYTPETGTIIKTPKT 259 Query: 268 NAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR-TEKQKLHFVFMPRVCNGK 326 + IR +T+ + + L K + + + EK + + Sbjct: 260 KSSIRKITIPKTTSDLLSIYRKWWLEQKIKVGDQWQKSAREEVEKNGQTWEDPEYLFTTW 319 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQM 386 +L + +KR + + RHT A L+ AG N +A++MGHE + Sbjct: 320 DGYVMHPDTLTKTFKKFIKRNNLPDIRLHDLRHTAATMLIHAGLNIRAVAARMGHENPNV 379 Query: 387 VYEIYGMWIDDMNDEQIAMLNARL 410 IY + + + ++ + Sbjct: 380 TLAIYSHALLSADKQAADVMGNLI 403 >UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN2_9FIRM Length = 526 Score = 317 bits (813), Expect = 5e-85, Method: Composition-based stats. Identities = 86/406 (21%), Positives = 149/406 (36%), Gaps = 35/406 (8%) Query: 10 IRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSS 69 R + R E + + N+ A E E L++ ++ Sbjct: 3 KRRKKGEGSVRQRNDGRWEGRVVIGYDEKGLPRTKNVLAKTKRE----CQEKLKQLRETM 58 Query: 70 TGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 TG+K R FGE D W + + ++ T ++++ I P++ + Sbjct: 59 TGSKTEKVRPEMPFGEWLDFWYQNYVKPQIRPTTQANYEAKIYQHIIPELGKIPLNQLAQ 118 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 D+ + + L KG + V A S L A Q G I T P G Sbjct: 119 KDLQQFYARMKTAGRLIRTEQF--GKGLSDSMVRGLHAACRSALEKAVQEGLIRTNPAVG 176 Query: 189 VKKLQRNRIKPDPLSKTEFNALM-ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEK 247 K + + L + E + +++ L+ + +GLR GEL AL W+D+D Sbjct: 177 CKLPPKRGREMQVLGREELQRFLIQAQAEGYFELFLLDLCTGLRRGELLALQWDDLDFRT 236 Query: 248 GIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 G + V + + + PKT A IR + L +E L+ + Sbjct: 237 GALTVNKQVYEVKGRLQVSVPKTRASIRRLVLPPGVVEVLRAYRETV------------- 283 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW 364 ++F V K+ + ++ R ++RAG +R + RHTFA Sbjct: 284 --------DSRWMFPSPV---KEDVPMTPGAVRRRLQIILERAGCKRIRFHDLRHTFATL 332 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 L G + +++ +GH +A +IY DM E A ++ L Sbjct: 333 SLENGMDVKTLSAMLGHVSAATTLDIYTHVTGDMQSEAAAKIDRGL 378 >UniRef50_P76168 Putative lambdoid prophage Qin defective integrase (Fragment) n=64 Tax=root RepID=INTQ_ECOLI Length = 385 Score = 316 bits (811), Expect = 8e-85, Method: Composition-based stats. Identities = 154/373 (41%), Positives = 230/373 (61%), Gaps = 7/373 (1%) Query: 44 GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTM 103 G LR+ + + I +G F+Y ++FP S K R T EL + + +KETE+ ++ Sbjct: 1 GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSL 60 Query: 104 KKTKSQLKTLRIIICESTPI-SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVD 162 ++ +K + I + S I +L R ELL G + N + GR+ TV+ Sbjct: 61 NTYRAVIKN-ILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVN 119 Query: 163 NYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNL 221 NY+ L ++ +F +G+++ PF+G+ L+ +R PDPLS+ EF L+++ + Q +NL Sbjct: 120 NYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNL 179 Query: 222 WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAG-IRTVTLLQPA 280 W +VY+G+R GEL AL WED+DL+ G + +RRNL D F PKT AG R + L++PA Sbjct: 180 WCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAK-DRFTVPKTQAGTNRVIHLIKPA 238 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNG--KQKPYYSVSSLGA 338 ++AL+ Q LT ++ I + REYGRTEKQK FVF P V +++V S+ Sbjct: 239 IDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQ 298 Query: 339 RWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 W+AA+KRAG+R R Y +RHT+ACW LTAGANPAFIA+QMGH AQMV+++YG W+ + Sbjct: 299 MWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSEN 358 Query: 399 NDEQIAMLNARLS 411 N+ Q+A+LN +LS Sbjct: 359 NNAQVALLNTQLS 371 >UniRef50_D1A578 Integrase family protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A578_THECD Length = 409 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 71/426 (16%), Positives = 133/426 (31%), Gaps = 53/426 (12%) Query: 3 KLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 +L GV RG R + W ++A R + GE+ Sbjct: 17 RLRDGVMKRGSTWSYVIRVRDPETGVSKPKWVGGFVTEEEAKAARDEARVKARRGEY--- 73 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 R T + D W + E+ T+ + ++ Sbjct: 74 -------------IDRTTITVAQYLDEWLEAHAVEIKPRTLAGYHTMVRLYIKPHIGDLR 120 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ-SGFI 181 + +R + I +LL K +V TV A+L A I Sbjct: 121 LQAVRPAQITKLYRDLLASG-------GEGGKPLSVSTVMRVHAILHKAFADAVLVDELI 173 Query: 182 STKPFEGVKKLQRNRIKPD-PLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALA 239 + P E K+ + + D + + +++ + + A Y+G R GEL AL Sbjct: 174 PSNPAERAKRPKGLVREADGIWTPAQLRVFLQAVREHRLFAFYHLAAYTGARRGELLALR 233 Query: 240 WEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 W +VDL+ + + + ++ + G K+ R VT+ + L+E K + Sbjct: 234 WSNVDLDGKRITIGGSAGVVKGRRIEGTTKSGRS-RVVTIDDETVAVLREHRKAQLAEQF 292 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG-------- 348 + + +VF ++ S+G ++ Sbjct: 293 QAGEAW-------RGAEDGYVFTT-----ERGEPIHPDSVGWLMTKTIRAYNNPPQGPKP 340 Query: 349 ---IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAM 405 + + RH A LL AG +A+++GH + +Y I + Sbjct: 341 AEPLPHARVHDLRHIHATTLLLAGVPVHVVAARLGHADPAITLRVYAHVIRSAEVAAADV 400 Query: 406 LNARLS 411 +S Sbjct: 401 FAKVMS 406 >UniRef50_A9VJZ8 Integrase family protein n=15 Tax=Bacillus cereus group RepID=A9VJZ8_BACWK Length = 370 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 72/414 (17%), Positives = 155/414 (37%), Gaps = 57/414 (13%) Query: 7 GVEIRGRYIRIWFMFR-------GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEF 59 V+ + + +++ G+R ++ +G+ K+A N ++ E+++G + Sbjct: 4 SVKKNKKTGKYFYIVDIGIDPLTGRRKQKKKRGFI----TKKEAENALTKLLSEVHTGTY 59 Query: 60 EYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 +GE + W K+ + T K K L + I Sbjct: 60 V----------------EPSKLLYGEYLESWFNTKKYSVGIQTAKVLKGYLNSRIIPSLG 103 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + ++ + + NY N L +G T++ I L+ + L A Sbjct: 104 NIKLAKLTSLHMQNYVNSLRD-------------EGLKRGTIEKIIKLIRNSLEHAIDLE 150 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAAL 238 I+ K + ++ + ++ E +++ + ++ + A+ +G+R GEL Sbjct: 151 LITKNVAAKTKLPKADKEELTVWNEHEVQFFLKAAQDSRYSIVFHMALVTGMREGELLGF 210 Query: 239 AWEDVDLEKGIVNVRRNLTILDM--FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 W+DVDLEKG + + + L+ KT + +R + L + LK+ + + Sbjct: 211 RWKDVDLEKGHLTISQTLSHDGKTFLLGGKTKSSLRKILLPASTVAKLKKHRAVVLKEKL 270 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 S+ Y V + +++ NA +K+ + + + Sbjct: 271 SQGEEYQDN--------------DLVMCTPSGTPINPANVRRSLNALIKKVAVPKIRFHD 316 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHT A LL G N I+ ++GH ++ + Y + M ++ + + L Sbjct: 317 LRHTHATLLLAKGVNVKVISERLGHSNIKITLDTYSHVLPTMQEDAVNKIEEIL 370 >UniRef50_C3EB65 DNA integration/recombination/invertion protein n=1 Tax=Bacillus thuringiensis serovar pakistani str. T13001 RepID=C3EB65_BACTU Length = 367 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 82/405 (20%), Positives = 154/405 (38%), Gaps = 50/405 (12%) Query: 14 YIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAK 73 + + + +G R + T N ++A AL + EI GE+ Sbjct: 2 RVTVGYNEKGNPIRRSKMA---TAKNKRQAEKELALFIAEIEVGEY-------------- 44 Query: 74 MVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDIL 132 F + W + +T L T+ L T I + + + I+ ++ Sbjct: 45 --IKPQKMLFKDFFAEWIQKYAKTNLQKTTLFNYIHILDTHIIPVLGNKKVEDIKTIHLV 102 Query: 133 NYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL 192 + L KG T+++ + L + A + GFI P +GV KL Sbjct: 103 TLFHGKL------------PAKGLATTTINSIHTRVKMLFKKACEWGFIKKNPMDGVSKL 150 Query: 193 QRNRIKPDPLSKTEFNALM---ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 + R + P + E ++ E EK ++ L++ A+ +G+R GEL L W +D + + Sbjct: 151 KNKRQELQPYDQKEIVKILALTEQEKDMNKMLFQLAIVTGMRRGELLGLEWGHIDFQNDM 210 Query: 250 VNVRRNLTILDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 V++++ + PKT+ R +++ LK+ K R + + Sbjct: 211 VHIQQTIVRAGKEILLKEPKTSKSKRIISIPPTFTTKLKQYKKYCAEKRIACGDLW---- 266 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 E ++ F+F + RW ++ G+R + R T A +LL Sbjct: 267 ---EGEEHLFLFST-----WNGRPLTPEKASTRWQYFTQKHGLRHIKLHGLRSTHATYLL 318 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 T G N I+ ++GH Q IY ++++N + L+ Sbjct: 319 TQGENLKVISERLGHSDIQTTMNIYAHVLEEVNKKASNHFETLLT 363 >UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus RepID=C2E2T4_LACJO Length = 386 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 67/413 (16%), Positives = 123/413 (29%), Gaps = 58/413 (14%) Query: 13 RYIRIWFM-FRGKRCRETLKGWEITNSNIKKAGNLRA---LIVHEINSGEFEYLRRFPQS 68 +R F + GK ET + K + I +I G + Sbjct: 15 GQVRYKFKIYVGKD-EETGNSIQARKQGFKSYDDALKSYFEIKDKIAKGTYTGKENKKHK 73 Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 + ++W E + T+ TK+ K + + + I Sbjct: 74 FKK--------------IYEMWLANYELTVKPTTLLNTKACFKNHILPVLGELYVEKIST 119 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 N+ + +L +L +A + I P + Sbjct: 120 FRCQKALNKWFSDL---------------PKMYRKVYSLSSKVLDYAVNNDLIVKNPMKR 164 Query: 189 VKKLQRNRIKP---DPLSKTEFNALMESEK----GQSQNLWKFAVYSGLRHGELAALAWE 241 V K + + K + SK E N +++ K + ++ Y+G+R GE AL W Sbjct: 165 VIKPKMQKDKREFTNFYSKEELNKYLDACKQKKNPRVYLFFRLLAYTGMRKGEALALKWS 224 Query: 242 DVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 D+D E + + + L++ + G PKT A RT+ + + + L+E K Sbjct: 225 DIDFENETIRINKTLSLGTHNSLVIGTPKTKASNRTIQVDEQTIYYLQEWRKRQRKELFK 284 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 G +F + K A ++ + Sbjct: 285 V--------GFNALTDDQLLFSNG-----NNQLIRPWLVQYWNKTIAKDARLKHITVHGF 331 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHT A L AG + ++GH +Y + + Sbjct: 332 RHTHASLLFEAGTPMQDVKERLGHSDITTTMNVYTHVTKSEKKKTAEKFARFM 384 >UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8K7_9ACTO Length = 377 Score = 313 bits (804), Expect = 5e-84, Method: Composition-based stats. Identities = 86/423 (20%), Positives = 148/423 (34%), Gaps = 61/423 (14%) Query: 1 MSKLPTG---VEIR-GRYIRIWFMFR---GKRCRETLKGWEITNSNIKKAGNLRALIVHE 53 M+K G + R +R G+ R + G + + Sbjct: 1 MAKRGNGEGSIFKRANGRWYSALTYRDDFGEVKRREVSG-----RTQAEVRAKLRELRER 55 Query: 54 INSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKET--ELTTNTMKKTKSQLK 111 + +G T + WT + T+ + + Sbjct: 56 VEAGA----------------PVKDASITMAAWLEDWTTKALPASDRKQATIDLYATIAR 99 Query: 112 TLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSL 171 + + S P+ +R S++ + G + +V A+L + Sbjct: 100 SHLVPKLGSLPLDRLRPSNVEALV-------------LAKRRAGLSASSVRTIYAVLRAA 146 Query: 172 LRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGL 230 L A + G I P VK+ R LS + AL+E+ +G + L++ + +GL Sbjct: 147 LDVAVRDGLIQRNPAALVKRPAVERKDAGYLSAQQAEALLEAVRGDRLEALYRVMLATGL 206 Query: 231 RHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQ 287 R GE AL W DVDL+ +V VR L+ G PKT RTV L PA+E L+ Sbjct: 207 RRGEALALHWRDVDLDAAVVRVRWTLSRTSAGLELGEPKTEKSRRTVPLPVPAVETLRAH 266 Query: 288 YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA 347 K + + + + VF + ++ R+ A +RA Sbjct: 267 RKRQAAEQLAAGSLWQASG---------LVFTSEIGT-----PLEPRNVLRRFEALAERA 312 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 G+R + + RH+ A +LL AG + + +GH + + +IY E L Sbjct: 313 GLRGVHLHTLRHSAASFLLAAGTHTKVVQEHLGHSSYAITADIYSHVAPAQQREAADKLG 372 Query: 408 ARL 410 + Sbjct: 373 QAI 375 >UniRef50_C1D584 Phage integrase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D584_LARHH Length = 416 Score = 313 bits (803), Expect = 8e-84, Method: Composition-based stats. Identities = 124/415 (29%), Positives = 187/415 (45%), Gaps = 47/415 (11%) Query: 6 TGVE-IRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRR 64 TG+ + I I F F G+RCRE +K + T +N+K+A RA I+ I +G F Y Sbjct: 10 TGIRPVSESSIEIAFTFAGERCRERIK-LKPTPANLKRAAQHRAAILAAIENGTFVYAVT 68 Query: 65 FPQSSTGAKMVTTRVIK---TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 FP S T V K T W K E L ++T+ K+ + + Sbjct: 69 FPHSKKAVLAKRTPVAKYGKTLDAWMSEWLKRCERYLKSSTLHDYKTIAWRQLSPVFGNH 128 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 I I+ SDI + + L + + + N +++ + L A I Sbjct: 129 QIGDIKRSDIRAWCDGLT----------------CSNKRIANILSVFRASLTAAMDDELI 172 Query: 182 STKPFEGVKKLQRNRIK---PDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAAL 238 T P G +R +K DP + E A++E+ N+ +FA ++GLR EL AL Sbjct: 173 DTNPLSGWTYRRREEVKEDDIDPFTPDEQTAILEALPEAGCNMIRFAFWTGLRTSELVAL 232 Query: 239 AWEDVDLEKGIVNVRRNL-TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 W+D+D G V++ + L PKT A R VTLLQPALEAL Q +T Sbjct: 233 EWKDIDWVGGKVSISKALTQRATKAETPKTRASRRFVTLLQPALEALMAQKAVT------ 286 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKRAGIRRRNPYH 356 + E+GR +P+ ++ W A++RAG+R R PY Sbjct: 287 ----FFSEHGRVWIDP-----------RTGEPWTGDQAIRKTLWTPALRRAGVRYRRPYQ 331 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 TRHTFA +L+AG +P ++A+QMGH + M+ +YG WI + ++ S Sbjct: 332 TRHTFASMMLSAGESPVWVANQMGHASWTMIARVYGRWIPNGDNGDGQKAVKAFS 386 >UniRef50_UPI000169495E prophage LambdaBa04, site-specific recombinase, phage integrase family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169495E Length = 379 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 84/413 (20%), Positives = 149/413 (36%), Gaps = 70/413 (16%) Query: 12 GRYIRIWFMFR----GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 G + GKR ++ + G+ ++A I E+ +G + Sbjct: 22 GAKWYYRYDITDPKTGKRKQKEVGGF----RTKEEAQEAAVRIQSELLNGTYV------- 70 Query: 68 SSTGAKMVTTRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 T GE + + + E+ NT ++ + +K S ++ + Sbjct: 71 ---------EPTKLTVGEFLLDFVENTLKYEVAPNTYEQRMTFVKNHIQPNIGSLRLTDL 121 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 + + + N L ++ V N LL A + IS P Sbjct: 122 TPNHVQKFYNSL--------------REHYGAGYVQNIGNLLSKAFTQAVKWNMISRNPI 167 Query: 187 EGVKKLQ--RNRIKPDPLSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALAWE 241 VKK R K + + ++ K ++ A+ SG+R GEL L W+ Sbjct: 168 PLVKKPSLSRKNTKMKTWTVEDQRKFLDYAKDGPKLYYVIFLLALTSGMRKGELLGLIWD 227 Query: 242 DVDLEKGIVNVRRNLTILDMF----GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 DVD +KGIV+++R + PKT + IRT+ L +P ++ +K+ Sbjct: 228 DVDTKKGIVSIKRTIVYAQRKLYLKDMPKTESAIRTIQLPEPTIKVMKQWKLEC------ 281 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 +L+ +F G +SL + +K AG+ + Sbjct: 282 ------------PANELNLLFPSPKTKG----ILYPNSLDKQLAKTIKGAGVPEITMHGL 325 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHTFA LL + NP + +GH T + + Y + +M + + L A L Sbjct: 326 RHTFATTLLGSNVNPKIVQEMLGHATIKTTMDTYSHVLPNMQKDAASQLGAVL 378 >UniRef50_C9RA80 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RA80_AMMDK Length = 383 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 87/414 (21%), Positives = 152/414 (36%), Gaps = 51/414 (12%) Query: 8 VEIRGRYIRIWFM-----FRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 V RG Y + F GKR ++ L+G+ K+A A + E+ G + Sbjct: 9 VGKRGVYYDVVFDIGRDPVTGKRKQKWLRGF----RTKKEAEAALAQAIAEVERGTY--- 61 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 T E W ++ +L+ T ++ ++ I P Sbjct: 62 -------------IDPEKVTLAEYLKEWHAARKHKLSLRTWERYGQLIEHWLIPHLGGIP 108 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + + + + + +L + L K + TV + +L LR A + I Sbjct: 109 LRKLSPVHLEKFISAMLEADRL------DGKGKISPTTVRHAALVLNKALRDAVKKRLIP 162 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWE 241 P E V K ++ R +P L + E LM + +G AVY+G R GE+ L W Sbjct: 163 YNPMEAVDKPRKARKEPPALKEGELRRLMSAAEGTYLYAPITLAVYTGARLGEILGLRWR 222 Query: 242 DVDLEKGIVNVRRNLTI----LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 DVD E G + + + L F PKT R + + L AL++Q KL + Sbjct: 223 DVDFEAGCIFILQALKRNLKGELYFDEPKTPRSRRRIEIGPACLAALRKQKKLQAEWKLK 282 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 + + VC + + + + + GI N + Sbjct: 283 AGSAWQE--------------TGLVCTREDGSPIDPHAFSSAFRKLASKLGI-DANFHAL 327 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A LL AG + ++ ++GH + + ++Y + M ++ L+ Sbjct: 328 RHTHATMLLKAGVHLKIVSERLGHASVAITGDLYSHVLPGMQGGAAQLVEEELN 381 >UniRef50_UPI0001694281 DNA integration/recombination/invertion protein n=8 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694281 Length = 413 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 71/426 (16%), Positives = 143/426 (33%), Gaps = 55/426 (12%) Query: 7 GVEIRG-RYIRIW----FMFRGKRCRETLKGW-------EITNSNIKKAGNLRALIVHEI 54 +E RG R+ + G R R K + + + E+ Sbjct: 5 SIEKRGENTWRLTIDLGYNQDGSRNRLRRKVVVEDKALLKTKKKLREYLEDELHKFKIEV 64 Query: 55 NSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCD-IWTKIKETE---LTTNTMKKTKSQL 110 +GE+ T + + W + L+ T + + Sbjct: 65 EAGEY----------------IAPQKMTLRQFIENEWEPKYASNTENLSPLTYQTYMHFI 108 Query: 111 KTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCS 170 + + + + IR I+ + N+L E + T+ +L + Sbjct: 109 ENRIMPVFGHKNLEDIRTLHIVTFINDLSKPEARKDGKSGK----LSPGTIQYIHRVLKN 164 Query: 171 LLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE---KGQSQNLWKFAVY 227 + A + I T P GVKK + + + D + E + + + + L ++ Sbjct: 165 IFNRATEWQLIKTNPIVGVKKPKVEQTEFDFYDEDEAREAIAALSKEPRRWRLLILGSMV 224 Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEA 283 G R GEL AL W +VD + +++ +++++ + PK+ + R V + ++ Sbjct: 225 GGFRRGELLALEWSNVDFDNMTLSINKSISLTKDGRAVEKAPKSKSSKRIVDMPDWYMDE 284 Query: 284 LKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAA 343 LK + S + +VF + + WN Sbjct: 285 LKVHEYEWKKEKLSVGDKW-------RGGDRQYVFHAGF-----GKPFHHTYPTEWWNGF 332 Query: 344 VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 KR ++R + RH+ A L+ AGA+ + ++GH Q +IY ++ + Sbjct: 333 TKRHNLKRVRFHDLRHSSATLLIEAGASMKAVQQRLGHSKHQTTADIYAHVTKKVSRDTA 392 Query: 404 AMLNAR 409 N Sbjct: 393 EKFNKF 398 >UniRef50_Q12GK7 Phage integrase n=11 Tax=Proteobacteria RepID=Q12GK7_POLSJ Length = 471 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 90/417 (21%), Positives = 162/417 (38%), Gaps = 50/417 (11%) Query: 13 RYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF------- 65 + + F + G+R RE +N K+ I +I G F+Y + F Sbjct: 11 GTLFMDFRYAGQRLRE-YTMLPDMPANRKRLQKALDRIETDIALGTFDYEKTFGKPLPQP 69 Query: 66 -PQSSTGAKMVTTRVI----------KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLR 114 P++ G+ T R FGE W E + K L Sbjct: 70 EPKTKDGSVDRTARSDGLPVLSRNGTPLFGEFAQQWFTEVEVSWRRSYRITQKGALDKYL 129 Query: 115 IIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRF 174 + + HI +D+L +R L T + R V+ + L +L Sbjct: 130 LPFFGDKEVGHITKADVLAFRASLAKVTTRKSQGT------LSNRRVNAVMKPLRQILNE 183 Query: 175 AYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGE 234 A F F +K L+ R P + E ++ + + +N + ++G+R GE Sbjct: 184 A-ADRFEFNSAFRNIKPLKMKRSDVQPFTLDEVELILNTVRVDYRNYFNVRFFTGMRTGE 242 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 L W+ VD E+ ++ VR ++ L+ KT+ +R + + Q +ALK QY+ Sbjct: 243 AHGLKWKYVDFERRLILVRESIV-LNEEDELKTDGSVRDIHMSQVVYDALKAQYQ----- 296 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 + +VF C+ +P + + L WN ++ G+ R Sbjct: 297 --------------AAGEFSEYVF----CSRSGQPINNQNFLNRVWNPLLRHLGLEHRRA 338 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 Y RHT A L +G P +IA Q+GH + +M++ +Y ++ ++ + + + L+ Sbjct: 339 YQMRHTAATLWLASGEAPEWIARQLGHTSTEMLFRVYSRYVPNLTRQDGSAMERLLA 395 >UniRef50_A6P1V8 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P1V8_9BACE Length = 409 Score = 308 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 72/406 (17%), Positives = 146/406 (35%), Gaps = 39/406 (9%) Query: 12 GRYIRIWFMFRGKRCRETLKGWEI-TNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSST 70 I G+ +G + T I+K+ + R + + Sbjct: 7 NGEGSIRKKPNGRWEGRYTQGIDPNTGRAIQKSVSARTQAECKEKLAKAI-------RDN 59 Query: 71 GAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYS 129 V T E C +W + + + NT K ++ ++ + + + Sbjct: 60 RGIPVNHNEDYTVAEWCRLWFETYSKPVIRPNTAKTYENMIENHIVPAIGGVKLKRLTAI 119 Query: 130 DILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV 189 I N+ + + TV +L S L+ A + I P + Sbjct: 120 QIQKMYND-SKTNGRVQRFEKKTDTALSGSTVRRIHMVLSSALKQAVKERIIPYNPCDNC 178 Query: 190 KKLQRNRIKPDPLSKTEFNALM-ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKG 248 + + + + + + + E+EK ++ + SGLR GEL AL W+D++++ Sbjct: 179 RIPPKEKKEMAIIPSEKLGVYLSEAEKYGVLPMFFLELSSGLRRGELLALRWDDLNVKDR 238 Query: 249 IVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 I++V + +T +D + PKT +R V L Q A++ L +++ + Sbjct: 239 ILSVSKQVTRIDGELVITEPKTKNSVRKVALSQQAVDILVREHEQHPDNPI--------- 289 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR-RRNPYHTRHTFACW 364 + + Y+S ++ + +AGI R + RHTFA Sbjct: 290 ---------------LFPSPRTGGYWSPDAVSRINRKLLAKAGIEERVRFHDLRHTFATM 334 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 L++G + ++S +GH +A + Y +DM + + Sbjct: 335 ALSSGVDVKTLSSMLGHYSAGFTLDTYTHITNDMQRGAAEKIGGFM 380 >UniRef50_A9KI10 Integrase family protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KI10_CLOPH Length = 443 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 75/427 (17%), Positives = 142/427 (33%), Gaps = 59/427 (13%) Query: 4 LPTGV-EIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 LP G+ + + + G R ++K+ +EI G + Sbjct: 56 LPKGITRCSDGRYQARYTYEGHRYCLY-------GRDVKELEERLNNAKYEIQHGIY--- 105 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKET-ELTTNTMKKTKSQLKTLRIIICEST 121 + + W ++ + T++ + Sbjct: 106 -------------AKEERISLNAWYETWINEYKSMTVKQGTVESYECMYLYYVKPELGKR 152 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 I IR I N+L + G + T+ LL ++ + A ++ I Sbjct: 153 LIKDIRGEHIQKLYNDLS-------------RNGYSKSTISLIHVLLGAMFKQALKNELI 199 Query: 182 STKPFEGVKKLQRN-RIKPDPLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALA 239 P + + + + L+ E L++ G + + + ++ +GLR GE+ L Sbjct: 200 KKNPVDFTTLPRAERKKERRVLTLKEQEILLKEITGHELEPVVRLSLATGLRVGEVTGLE 259 Query: 240 WEDVDLEKGIVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 W DVD K V VR L PKT+ R++ LL LK + H Sbjct: 260 WCDVDFNKKEVTVRGTLKCTRKGMEYYKDTPKTDKSTRSIPLLDNMELMLKRYRIIQKEH 319 Query: 295 RKSEITFYH-----------REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAA 343 + S + RE G+ + + + +G + YYS S+ Sbjct: 320 KLSMGIDWKPIEGLEDLVFLREDGKPFSGQHIRQQLVHIVDGINEKYYSKKSIRQ--EKL 377 Query: 344 VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 ++ P+ RHTFA L G P + +GH + M ++Y + +++ Sbjct: 378 LEE-KFDYFTPHALRHTFATRALENGIPPKVVQEILGHSSITMTLDLYTHVLPQTKAQEM 436 Query: 404 AMLNARL 410 L + + Sbjct: 437 KKLESLI 443 >UniRef50_C6MG53 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MG53_9PROT Length = 361 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 112/400 (28%), Positives = 177/400 (44%), Gaps = 40/400 (10%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 M G+ IRG +I F ++G RCRE++ T + K+ I +EI +G F+ Sbjct: 1 MDARQRGITIRGNSAQISFTYQGVRCRESIP-IPPTKTAQKELALKLQSIKYEIKTGTFD 59 Query: 61 YLRRFPQSSTGAKMVTTRVIK-TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 Y R FP S + R T E W + + +L +T++ S + I Sbjct: 60 YNRHFPYSKKAKEFRKNRPDLYTIKEALISWLQRNQAKLQLSTLQDYNSAIYHHLIPTFG 119 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + IS + S + + +EL + + N + L + Y Sbjct: 120 NLTISELTASKVKEWLSEL----------------PCSNKRKSNILTPLRQMFEELYLDE 163 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALA 239 I P VK L +P+P ++ E ++ GQ++NL +FA YSGLR EL AL Sbjct: 164 IIDKNPLSRVKNLPNKTREPEPFTQEEIIKILNELTGQAKNLIQFAFYSGLRTSELIALC 223 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 W++V+ E+ + + + + KT +G R VTL A EAL Q TG ++++I Sbjct: 224 WKNVEFEQNRIFI-KQAHVRGQLKDTKTKSGKREVTLQPQAKEALLNQQAFTG--KQNQI 280 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 F++ + + K + W A+K+AGI+ RNPY TRH Sbjct: 281 VFHNPKTKQPWKND---------------QPIRKN----VWIPALKKAGIKYRNPYQTRH 321 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN 399 TFA LL+ G ++A QMGH+ M+ ++YG WI Sbjct: 322 TFASMLLSRGEKLLWVAQQMGHKDWGMIIKVYGRWIPQSK 361 >UniRef50_Q9F0J7 Integrase-like protein n=7 Tax=Staphylococcus RepID=Q9F0J7_STAAU Length = 378 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 63/399 (15%), Positives = 126/399 (31%), Gaps = 58/399 (14%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK+ R T +G+ ++A A + E++ F I T Sbjct: 27 GKQKRTTRRGF----KTEREAKIAEAKLQTEVSQNGF----------------LNNDITT 66 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F E+ ++W + + + +T ++ + T + + PI I N+ Sbjct: 67 FKEVYELWLEQYQNTVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINKW---- 122 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP--- 199 K + + ++ ++A I PF K ++ + Sbjct: 123 ----------NKKYSD--IKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAPRKKEAQQDAS 170 Query: 200 -DPLSKTEFNALMESEKGQ--SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN- 255 S E + + +++ ++G R GEL AL W D+D K +++ + Sbjct: 171 TKYYSSDELKQFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTC 230 Query: 256 ---LTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 + PKT + RT+++ LK YG Sbjct: 231 ARGANYKLVIQEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLK--------YGHNTSD 282 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 K VF + + ++ +R + RHT L AG + Sbjct: 283 KHQHVFTTV----RDNKPLYPEHCNKALDLICEKNSFKRIKVHGFRHTHCSLLFEAGLSI 338 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + ++GH + +IY + D+ ++ Sbjct: 339 QEVQDRLGHGDIKTTMDIYAHVTEKQRDQVADKFAKYIN 377 >UniRef50_C2YK72 Phage integrase n=3 Tax=Bacillus cereus group RepID=C2YK72_BACCE Length = 387 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 76/423 (17%), Positives = 134/423 (31%), Gaps = 66/423 (15%) Query: 6 TGVEIRGRYIRIWFMFR--GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 R ++ GK +ET KG K+A A + ++ +G Sbjct: 2 ASFRKRKDKWEYRIRYKEMGK-YKETSKG---GFKTKKEAQLAAAKVEEKLATG------ 51 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKET-ELTTNTMKKTKSQLKTLRIIICESTP 122 TF E W + + T + ++ + Sbjct: 52 ----------GNLKDSKITFNEYLYEWLNTYKKGNVAPRTYMVYEKNIRLHILPAFGELR 101 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY-QSGFI 181 + + + N L+ + + +TV+ + L A + G + Sbjct: 102 LKDLTRIKYQKFINGLM--------------EKYSKKTVETINVTMHHALDIAVNELGIL 147 Query: 182 STKPFEGVKKLQR----NRIKPDPLSKTEFNALMESEKG-----QSQNLWKFAVYSGLRH 232 P +K + E + + +L+ F +GLR Sbjct: 148 EKNPTSKIKLRTTRVTSKDDEIKCYDIDELQQFLNYVLKEKGGFKYFSLFMFLSRTGLRI 207 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTILDM-----FGPPKTNAGIRTVTLLQPALEALKEQ 287 GE AL WEDVD E+ + + + L FGPPK + RT++L + LK+ Sbjct: 208 GECLALQWEDVDFEEQKLFINKTLINTKRSEKILFGPPKNKSSKRTISLDPSTISHLKKM 267 Query: 288 YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA 347 +Y + +FVF SSL A K+ Sbjct: 268 KIEQNKQVLKNGKYY---------KDYNFVFTHE----DNSCMLHPSSL-KFLLEASKKG 313 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 + + RHT A LL +GAN +++ ++GH + M +Y M + + + Sbjct: 314 NFKYITLHGFRHTHAVHLLQSGANIKYVSERLGHSSIDMTANVYLHITKSMEETAVNQYD 373 Query: 408 ARL 410 L Sbjct: 374 EFL 376 >UniRef50_A8HM00 Phage integrase n=5 Tax=Proteobacteria RepID=A8HM00_BURPS Length = 411 Score = 307 bits (788), Expect = 4e-82, Method: Composition-based stats. Identities = 123/419 (29%), Positives = 190/419 (45%), Gaps = 62/419 (14%) Query: 3 KLPTGVEIR----GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGE 58 +LPTG+E+R G +R+ F +RG+ CRETLK E T NI+ A LR I+ +I G Sbjct: 6 RLPTGIEVRTGARGASLRVRFYYRGEECRETLK-MEPTPKNIQYADRLRGEILRKIEMGT 64 Query: 59 FEYLRRFPQSSTGAKM-VTTRVIKTFGELCDIWT-----KIKETELTTNTMKKTKSQLKT 112 F Y FP+S A + T GE D + + +T ++ +T++ + + Sbjct: 65 FNYGEYFPESKRAATPRAASPSEVTVGERLDDFMTQARKAVAKTRMSPSTLEGYRKVVDG 124 Query: 113 LRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLL 172 + + +R +D+ + ++L T++T N + L S+L Sbjct: 125 RLRPRWGAVRLVDVRPADLRKWISDL----------------DVTLKTARNILGPLGSVL 168 Query: 173 RFAYQSGFISTKPFEGVKKLQ-------RNRIKPDPLSKTEFNALMESEKGQS-----QN 220 A I P + + + + DP S E A++ + +N Sbjct: 169 ADALNDELIDENPLTKIDVRKLLSKTTRPSDYEVDPFSIDEIRAILAAADELYPGGAARN 228 Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPA 280 L++FA +SG+R EL AL W VDL G+V V RN ++ KT AG+R V LL A Sbjct: 229 LFQFAFWSGMRTSELIALDWLHVDLNAGVVRV-RNAQVVGTMKTTKTKAGLRDVLLLPSA 287 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG-AR 339 AL+ Q ++T + + VF V +P+ + Sbjct: 288 RAALEAQREVT------------------RGMEHNRVF---VVPWHGRPWSGDKQIRVNC 326 Query: 340 WNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 W +K+A +R RNPY TRHTFA LL+ G NP ++A QMGH +M+ + YG WI D Sbjct: 327 WTYVLKKAEVRYRNPYQTRHTFASMLLSRGENPLWVAQQMGHVDTEMITKTYGKWIPDS 385 >UniRef50_A6TLJ2 Phage integrase family protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLJ2_ALKMQ Length = 382 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 73/418 (17%), Positives = 134/418 (32%), Gaps = 62/418 (14%) Query: 7 GVEIRGRYIRIWFM---FRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 V RG G R ++ G++ + + + Sbjct: 4 SVRKRGNTWSYRIDLGIVDGSRKQKETGGFKKKSEAHSALRKAIDELEN----------- 52 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 V +F + + + + E L N+ + + +K + Sbjct: 53 --------TGGVFEPTTISFSDYLNYFIENYIEIHLRENSQRARQHIIKNHIRPAFGNYK 104 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 I I + N+ + K + + A L + + A + FI Sbjct: 105 IMQITSQALQNFITK--------------KSKAYSKNYISMIHATLSTAFKMAVEWEFIR 150 Query: 183 TKPFEGVKKLQRNR----IKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAA 237 P VK +R+ + LS E N E +G + + A ++GLR GE++A Sbjct: 151 INPMTRVKVPKRDDQEMDKEIKTLSPEEVNRCAERLQGTHHYIPFMIAFHTGLRAGEVSA 210 Query: 238 LAWEDVDLEKGIVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 L W D+D + +++V + L F PPKT + RT+ + + LK Sbjct: 211 LQWSDIDFDNQMLSVTKRLDYSASKENWEFKPPKTRSSNRTIAIGNELITILKSHSINQK 270 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 ++ Y +C + ++G ++ I Sbjct: 271 KNKLKYGKHYTEN--------------DFICTFENGEVVITKAIGRVSEIIIRDVKI-DF 315 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 N + RHT A LL AG NP + ++GH T + + Y + + L Sbjct: 316 NFHMLRHTHATMLLEAGINPKVVQERLGHSTVSITLDTYSHITIEFQKTAVLEYEKYL 373 >UniRef50_A4J0G7 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0G7_DESRM Length = 388 Score = 307 bits (786), Expect = 7e-82, Method: Composition-based stats. Identities = 65/416 (15%), Positives = 149/416 (35%), Gaps = 47/416 (11%) Query: 8 VEIRGRYIRIWFMF------RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEY 61 ++ + + GKR ++ G+ + A A + I+ G Sbjct: 4 IKFNEKKGYYEVRYDAGFDGNGKRIQKYKGGF----KKERDAKLFAAQLTVNISQGT--- 56 Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICEST 121 E + W + K+ ++ + + ++ Sbjct: 57 -------------HIEPNKMFLFEYLNNWLEEKKETISPTSYCGYEVNIRCHINPYIGGI 103 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 +S +R + I ++L + +D + + K + ++ +L L AY+ I Sbjct: 104 KLSDLRAAHIRGLYSKLQKAREIKIDGEKRSFKPLSGTSIRYVHRVLSKALEDAYREETI 163 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAW 240 P + V +N+ + LS + +++ + + + +V G R GE+ L W Sbjct: 164 PKNPAKLVTPPTKNKFEAGFLSTKQIREMLDKLREDALYMPVYLSVVLGARRGEVLGLQW 223 Query: 241 EDVDLEKGIVNVRRNLTILDM----FGPPKTNAGIRTVTLLQPALEALKEQ--YKLTGHH 294 DVD+E ++++R NL + + KT++ R + + ++ALKE Sbjct: 224 SDVDMENKLIHIRHNLIMDNGNPVLREKTKTDSSNRVIVVTDRLIKALKEHKLKLKQKEM 283 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 + YH+ VC ++ S L ++ +++ G+ Sbjct: 284 KLQHGQLYHKS--------------DFVCTWPDGKPFNPSHLSRSFSLRLQKYGLPNIRF 329 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RH+ A ++ + ++GH T Q+ ++YG + +E ++ + Sbjct: 330 HDLRHSNAALMIAQNVPMKGASDRLGHSTIQITNDLYGHTERSVQEEIAIKIDQAI 385 >UniRef50_A3D4Z5 Phage integrase family protein n=3 Tax=Shewanella RepID=A3D4Z5_SHEB5 Length = 392 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 95/412 (23%), Positives = 170/412 (41%), Gaps = 42/412 (10%) Query: 8 VEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 V R + + F ++G RCRE T +N +K L ++ ++ +G F+Y FP Sbjct: 4 VNSRDGKLYLDFRYKGVRCREQTS-LADTPANRQKLNKLLLMLEQQMKAGSFDYRHHFPN 62 Query: 68 S---------STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 S + ++ F ++W K E + ++ + L+ I Sbjct: 63 SPKVEHFTQLAKLSQFHAAGGRMLFSAFANLWLDEKRVEWRASQIETVEGILRCHLIPAM 122 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 + I+ I DIL R L + L + + +++ + L +L A Sbjct: 123 GTKMIATICKQDILGLRLSLCEVDAL-------TNRSLSASRINHIMTYLRLILNEA-AE 174 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAAL 238 F P+ +K L R P S E ++ES + + + ++G+R GE+ L Sbjct: 175 RFGFQTPWRNIKALPMPRTDIQPFSLVEVYRIIESVRDDFRPYYTVRFFTGMRTGEIDGL 234 Query: 239 AWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 WE++D ++++R++L G KT++ R + + QP EAL+ Q +LT K Sbjct: 235 TWENIDFTNRLIHIRQSLVR-GSLGLTKTSSSDRAIAMNQPVYEALQAQSELTKIRGK-- 291 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 FVF CN + + W ++ + +RNPY TR Sbjct: 292 -----------------FVF----CNRRGDALSHQNVTKRVWYPLLESLALEKRNPYQTR 330 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 HT A L AG +P +IA Q+GH M++ +Y ++ ++ + A + Sbjct: 331 HTAATLWLAAGESPEWIARQLGHANTGMLFRVYSRYVPNLLGQDGAAFERLI 382 >UniRef50_A3JCU8 Phage integrase n=2 Tax=Marinobacter sp. ELB17 RepID=A3JCU8_9ALTE Length = 408 Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 96/427 (22%), Positives = 171/427 (40%), Gaps = 51/427 (11%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 M K+ + + FM RG RCRE + T +N K+ L + +I G F Sbjct: 1 MGKVRA--RKETGKLYLDFMCRGHRCREQTALLD-TLANRKRVEALLQKVEAKILLGAFN 57 Query: 61 YLRRFPQSSTGAKMVTT-----------------RVIKTFGELCDIWTKIKETELTTNTM 103 Y +FP S K+ + D W + + + ++ Sbjct: 58 YAEQFPDSRNLNKLKNDGSGAGINDEGADPEVNAAQTPYVADFADQWFQESKIQWRSSHT 117 Query: 104 KKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 + S L + ++T ++ I +DIL R ++ +T+++ Sbjct: 118 RNVVSILDSSLKPAFKNTRMAEITKADILAARTKMAKRRGRGASGLM------APKTINS 171 Query: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWK 223 ++ +L ++ A F P+ +K L+ R+ +P S E + + + +N ++ Sbjct: 172 HLTILRMIMTEA-SERFEFDNPYRNIKPLKLQRVHIEPFSLAEVERICKYVREDYRNYYQ 230 Query: 224 FAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEA 283 Y+G+R GE+ L W +VD EK + VR L KT+ R + + P EA Sbjct: 231 LRFYTGMRTGEIDGLKWANVDFEKQEILVRETLIH-GKTEYTKTDGSQREIPMFGPVYEA 289 Query: 284 LKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAA 343 LK Q+ G K FVF CN + +P + W Sbjct: 290 LKAQHAAIGKLSK-------------------FVF----CNREGQPLDHNNVTKRVWYPL 326 Query: 344 VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 ++ + +R PY TRHT A LL +G NP ++A +GH + +M++++Y +I ++ Sbjct: 327 LEALKLTKRRPYQTRHTAATLLLASGENPEWVARVLGHSSTEMLFKVYSRFIPNLTRMDG 386 Query: 404 AMLNARL 410 + L Sbjct: 387 SAFERLL 393 >UniRef50_A4J1T6 Phage integrase family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1T6_DESRM Length = 383 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 77/417 (18%), Positives = 148/417 (35%), Gaps = 58/417 (13%) Query: 4 LPTGVEIRGRYIRIWFMFRGK-----RCRETLKGWEITNSNIKKAGNLRALIVHEINSGE 58 +P +E R + + GK + + ++G++ T K+A A ++ E +G+ Sbjct: 1 MPGHLEKRHKSSWTIIIDLGKDPITNKRKRMVRGFKGTK---KEAEKEMARLIAEYETGQ 57 Query: 59 FEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIII 117 + G+ W + + L T ++ I Sbjct: 58 Y----------------IEPSKTCLGDYMLRWLEDYGKPNLAPTTYYSYSKIVEKHIIPS 101 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 S I ++ + Y ++ L + RTV + +L L A Q Sbjct: 102 IGSIIIEKLQPMHLQRYYSQKLQT--------------LSNRTVQYHHRVLKEALSHAVQ 147 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKF-AVYSGLRHGELA 236 ++ P + V+ + + + + + + ++++ K ++ AV++G+R GEL Sbjct: 148 WQLLNRNPADAVQAPKNKQKEIELPDLSNIDRMIQASKDHPDHIIIISAVFTGMRRGELL 207 Query: 237 ALAWEDVDLEKGIVNVRRNLTI----LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 L W+D+D +K ++ VR L F PK+ R + + LK+ K Sbjct: 208 GLRWQDLDFDKNLLYVRNTLQRLPDKGKFFTEPKSKKSRRQIIIPHFLTNLLKDHRKKQL 267 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 R Y Q VF ++ R+ A V + G+ Sbjct: 268 EERFKLGHLY---------QDHDLVFP-----RPDGTPADPGTVSHRFKALVDKIGLSGL 313 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + RH A LL NP + ++GH+T + ++Y I M +E L Sbjct: 314 RFHDLRHFHATLLLAENINPKKVQERLGHQTISLTLDVYSHLIPSMQNEIAEKLEEI 370 >UniRef50_A7VZ12 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VZ12_9CLOT Length = 414 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 74/400 (18%), Positives = 142/400 (35%), Gaps = 51/400 (12%) Query: 18 WFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTT 77 ++ + KR + + N +KA I + A++ Sbjct: 30 YYDSKNKRHVKYISTGLPEKGNKRKAEAELVKIRNAFE--------------PPAEIGEL 75 Query: 78 RVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI--SHIRYSDILNYR 135 F + W +I + + T +S +K + PI + I + Sbjct: 76 CSNMLFADYLLGWLEIVKVRVKPTTFGSYESMVKQTIEPYFRNKPITLKDLEARHIQQFY 135 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 +E L +V +Y A++ L++A ++ ++ V + ++N Sbjct: 136 SEKLKTVK--------------PNSVIHYHAVIHQALKYAMKTDLVAQNVAMKVDRPKKN 181 Query: 196 RIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 +P L E L + KG L A + GLR GE+ L W+ +D E+G + ++R Sbjct: 182 DFQPVFLDAAELQHLFDVVKGTKLELPVLVAAFYGLRRGEVLGLKWDAIDFERGTLTIKR 241 Query: 255 NLTILDMFGPP--------KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 +T +++ G KT + +RT+ L+ E E +++ Y+ EY Sbjct: 242 TVTSVNVGGKTQVIEQESAKTKSSMRTLPLVGRFREYFAEVKAAQELNKQVCGNCYNYEY 301 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 FVF+ + L +++ A ++R G+++ + RH+ A LL Sbjct: 302 -------DGFVFVDELGER-----MKTDYLTSQFPAFIQRHGMKKMRFHDLRHSCASLLL 349 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 G I +GH IY + Sbjct: 350 ANGVPLKQIQDWLGHSDFSTTANIYAHLDYSSKLSSAQAM 389 >UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium RepID=D0ADR3_ENTFC Length = 382 Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats. Identities = 73/401 (18%), Positives = 140/401 (34%), Gaps = 62/401 (15%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK+ R T +G+ K+A + E + + T Sbjct: 29 GKQVRTTRRGF----KTKKEAQLALTKLQLEYENNGLNKTKEL----------------T 68 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F E+ D+W E + ++ KTK Q + + I+ I + NE + Sbjct: 69 FQEVYDLWIVNYEQTVKESSFVKTKEQFANHILPAFGAYKINKITIDIAQKFANEKVKKF 128 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN-----RI 197 LY + ++N + +A + G++ P + + +R Sbjct: 129 VLYREF------------INNA----SRICDYAIKLGYLQDNPLKKITVPKRKVSVHEED 172 Query: 198 KPDPLSKTEFNALMESEKG----QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 + SK E ++S + + + ++ ++G+R GEL AL W+D+D + + Sbjct: 173 TLNFFSKEELEIFLKSVEKKKDIRMYSFFRTLAFTGMRVGELLALTWKDIDFNDNYIKIN 232 Query: 254 RNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 + L PKT R + + + LK+ + G Sbjct: 233 KTLARGKNRRLYVEQPKTKNSKRDIPVDDETMNILKKWRLEQRK--------WLLTLGIN 284 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 K VF ++ Y +S +K+ ++R + RHT A LL AG Sbjct: 285 TLSKNQLVFSN-----QKNEYLQLSKPRKWLEVIIKQNNLKRITIHGLRHTHASLLLEAG 339 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 AN + ++GH + Q+ ++Y D ++ + Sbjct: 340 ANIKDVQERLGHSSIQITMDLYIHITDKRKEKTATQFAKYI 380 >UniRef50_B2V4P6 Phage integrase family protein n=9 Tax=root RepID=B2V4P6_CLOBA Length = 382 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 79/418 (18%), Positives = 142/418 (33%), Gaps = 60/418 (14%) Query: 7 GVEIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 GV +G +F GKR R KG + K+A + ++E N+ Sbjct: 4 GVRKKGNRWYYYFEAGRVNGKRKRIERKGGD----TKKEAQQALRMALNEFNN------- 52 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE-TELTTNTMKKTKSQLKTLRIIICESTP 122 +F + D W NT + KS + Sbjct: 53 --------TGSYVNETNMSFSDFLDYWFDEYVMKNCKYNTQQTYKSFININLKPNLGIYK 104 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ-SGFI 181 I + Y+ + + N+ G + T+ +++ L A FI Sbjct: 105 IKQLNYAALQEFLNK-------------QYAHGYSKNTLARLRSIISHSLEMAVSPYQFI 151 Query: 182 STKPFEGVKKLQRNR--IKPDPLSKTEFNALMESEK--GQSQNLWKFAVYSGLRHGELAA 237 P + + + + + +S FN ++ + A +G+R GE+ Sbjct: 152 KVNPAKNLTLPRFDNIAKENIVISIENFNKIIGRFPCGTSFYIPLQIAFNTGMRVGEVCG 211 Query: 238 LAWEDVDLEKGIVNVRRNL----TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 L W+ VD EK + + + L F PKT IRT+++ + LK Sbjct: 212 LTWDCVDFEKKTIRIEKILIFKTKQGYEFSTPKTKGSIRTISIGDTLINILKTHKNWQEE 271 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 ++K+ ++Y+ VC + + +++SL I+ N Sbjct: 272 NKKNYGSYYNDN--------------NFVCTKENGSFVTMTSLRYLSRIINMELQIK-FN 316 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + RHT A LL GAN I ++GH ++Y M + + +L L+ Sbjct: 317 FHSLRHTHATMLLEGGANIKDIQDRLGHSKFSTTMDLYSHVTAKMQNSTVNILENILN 374 >UniRef50_UPI0001C37C27 integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37C27 Length = 391 Score = 303 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 73/411 (17%), Positives = 134/411 (32%), Gaps = 52/411 (12%) Query: 21 FRGKRCR----ETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVT 76 ++ K+ R ++ + G R + ++ + Sbjct: 12 YKDKQGRWRAVISIPSVDGPPKRRYIYGQTRKAVADKM---------HIILNQIHTNTYI 62 Query: 77 TRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 T E W + E+ T + + + + S + ++ Sbjct: 63 EPCKVTLYEWLCTWLDQYCKIEVKLTTYVNYDTYVHRHIKNTIGGYKLCDLNTSIMQSFF 122 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 NE L+ G + +T+ N ++ L A I P + V +R Sbjct: 123 NEKAENGKLHSSG------GLSPKTIKNMHDMMHRALDKAVHLDMIIKNPTDFVTLPKRR 176 Query: 196 RIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLE---KGIVN 251 + + L+ E L E+ KG + A+Y+G+R GE+ L W+ V +E + + Sbjct: 177 KSEMRFLTIDEQKKLQEALKGDRLEMPVLLALYTGMRQGEIFGLKWKYVHIESTDRAWLR 236 Query: 252 VRRNLTILDM------------FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 V + + PKT IRT+ L+ E L E H K Sbjct: 237 VVQAVNRFSNRTDDGKRKTFLSLSEPKTPHSIRTIPLMPYIAERLTEYKCEQEQHFKDNG 296 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 V K + + +KR G+ N + RH Sbjct: 297 LPMSE----------------MVFTTKNGNLVDPRNFQRDFKLLLKRNGLHEINVHGLRH 340 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 TFA L +G N ++ +GH + + Y +D+ E+++ LN+ L Sbjct: 341 TFATRALESGMNVKTLSKILGHSSVAFTLDTYAHVTEDLKFEEMSALNSFL 391 >UniRef50_D2SBK5 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SBK5_9ACTO Length = 365 Score = 303 bits (777), Expect = 7e-81, Method: Composition-based stats. Identities = 82/406 (20%), Positives = 143/406 (35%), Gaps = 63/406 (15%) Query: 13 RYIRIWFMFRG-KRCRETLKGWEITNSNIKK-----AGNLRALIVHEINSGEFEYLRRFP 66 I + + G KR R + + A I + + Sbjct: 3 GTITVDVLSDGSKRYRSRYRDAGGRQHEKRFQRRVDAQRWLDEQTSAIVTQTW------- 55 Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 R T + W +T L +T+ + +S L+ + ++ I Sbjct: 56 -------TAPERGRVTVEAWAEQWLAA-QTGLKPSTLYRYRSLLRAQILPRWGRHRLADI 107 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 ++D+ + +L+ G G TV +L +L A + G I P Sbjct: 108 THADVAAWVAQLVAG-------------GLAPPTVRQAHRVLALILTLAVRDGRIPRNPA 154 Query: 187 EGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLE 246 GV + R P L++ E L ++ G+ ++ + Y+GLR GE+AAL VD Sbjct: 155 AGVPLPRTRRADPRFLTREEVERLADAA-GEYGDVVRLLAYTGLRFGEMAALRVRRVDFL 213 Query: 247 KGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 + + V + T + +G PKT+ RTV + +E L + Sbjct: 214 RRRLTVAESATEVGGTVEYGTPKTHQ-QRTVPIPAVLVEPLSRRC--------------- 257 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 K + V S + ++ A K AG+ +P+ RHT A Sbjct: 258 -----GGKGRDDLVLTSP----GGAVLRSGNFRRRFFDPAAKAAGLEDLSPHDLRHTAAS 308 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 L+ +GAN + +GH +A M ++Y DD ++A Sbjct: 309 LLVASGANVKAVQRMLGHASAAMTLDVYSGLFDDDLGALADRMDAA 354 >UniRef50_A8MGA1 Integrase family protein n=7 Tax=Clostridiaceae RepID=A8MGA1_ALKOO Length = 380 Score = 303 bits (777), Expect = 8e-81, Method: Composition-based stats. Identities = 78/418 (18%), Positives = 136/418 (32%), Gaps = 56/418 (13%) Query: 7 GVEIRGRYIRIWFM---FRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 GV RG ++ GKR + KG K+A N + ++ SG Sbjct: 4 GVRKRGSSWYYYYDAGSVDGKRNKIERKG----GKTKKEALNALNEALTKLGSG------ 53 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 T E W + + NT + K Sbjct: 54 -----------YVEPKKITVHEYMTDWVENYIKENRKLNTYNRYKEIYNRHLKPYIGHLG 102 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 +S ++ + KKG + T+ N L S A + + Sbjct: 103 LSEVKPIHLDQML-------------LGEKKKGLSGSTLQNIYGTLNSAFNRAVKLQIMY 149 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVY------SGLRHGELA 236 P + + +R++ L+ E L ++ N + ++ GLR GELA Sbjct: 150 DNPLRFIDRPKRDKFVASTLAVEEIGQLFDALDTSKYNDYIMSLGLKIVLELGLRRGELA 209 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 L W+ +D K I+ + NL PKT+ R + + + ++ LK+ L Sbjct: 210 GLEWKYIDFNKQIITIANNLVDTYTEVSLTTPKTD-ERRDLYVSKGLMQLLKQHKVLQTK 268 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRR 352 +R Y ++ + + V + Y + ++N +K+ R Sbjct: 269 NRMKYRPHY-------KENEFNGNVCDFVMTWEDGTYVHPNYYTVKFNKLLKKVNFDRNI 321 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RHT A LL G + I +++GH IY +M + L L Sbjct: 322 RFHDLRHTNATLLLQQGIDFKVIQTRLGHSDINTTLNIYSHVNVEMQKKATEKLIEIL 379 >UniRef50_C4V5B3 Prophage LambdaCh01, site-specific recombinase phage integrase family protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V5B3_9FIRM Length = 377 Score = 303 bits (777), Expect = 8e-81, Method: Composition-based stats. Identities = 63/392 (16%), Positives = 116/392 (29%), Gaps = 35/392 (8%) Query: 26 CRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGE 85 R + KK I E + + T T Sbjct: 6 VRYNYRDPATGQIVRKKKRGFLRRIDAE-------EFLLQINKAQQEGVFLTPEKLTLST 58 Query: 86 LCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETL 144 + W + + +T + ++ +K I I I I + LL Sbjct: 59 YLNTWLSSYAKVNVKASTYAQYEAIVKKRLIPWAGGCDIKAITPMQIDEFYATLLQQGRA 118 Query: 145 YLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK-KLQRNRIKPDPLS 203 K G + ++V +L L A Q G + P V + + K S Sbjct: 119 ------DGKGGLSAKSVLYIHRVLNEALGHAVQKGLLVKNPLLSVTNIPKAKKFKASAYS 172 Query: 204 KTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 E +L+E+ + Q A GLR GE L W +D + + + + + Sbjct: 173 AEEIRSLLEAAAAENSFWQAAIALAAICGLRRGECLGLKWSKIDFDSQSITIDEQVIEIH 232 Query: 261 M---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 F PK+ IRT+ LK + + H++ Y + V Sbjct: 233 HKIHFSTPKSTESIRTIHAPAEVFAILKRRKEELDQHKEWLGNAY---------DEHDLV 283 Query: 318 FMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 + + + R +R + RH+ A +L +G + Sbjct: 284 LC-----RGNGSPIRPGNFTKAFKDFLARHNMRTIRFHDLRHSCASLMLQSGVAMKTASE 338 Query: 378 QMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 +GH + + ++Y + +E + Sbjct: 339 ILGHSSIAITADLYTHVMQKTKEEAAGKIGDY 370 >UniRef50_C0QHJ7 Phage integrase family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHJ7_DESAH Length = 360 Score = 303 bits (776), Expect = 9e-81, Method: Composition-based stats. Identities = 72/416 (17%), Positives = 137/416 (32%), Gaps = 66/416 (15%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 M+K+ R RY+ ++ GKR T+ + +K A + ++ +G + Sbjct: 1 MAKIAK---RRDRYVLDFYDLEGKRKWITM----PKGTTLKAAKEELRKVEDDLATGNY- 52 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 ++ + TF ++ W K+ + +T + K ++ Sbjct: 53 --------------ISPKKTPTFDQVAQEWLDHKKMNIRASTWAVYEGHTKNHF-PEFKN 97 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 I I + + + G + T+ + L + A + G+ Sbjct: 98 LKIHQITIQRVEKFITD-------------RQAAGMNLSTLRKILVSLRQIFNLAVKRGY 144 Query: 181 ISTKPFEGVKKLQRN------RIKPDPLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHG 233 P + + K L+ + A +E Q L+ A++SG R G Sbjct: 145 CPRNPLDYADMPKSQGEETDGADKIQILTHDQITAFLEVVTEQKYHVLFSLAIFSGARQG 204 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 EL L W D+ ++++R+ F KT R + + L+ LK+ Sbjct: 205 ELLGLKWSDILWGDSQIHIQRSFN-NQRFYDTKTKGSNRKIDIGPVMLKKLKKWRLAC-- 261 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 L VF N + + + +K A + R Sbjct: 262 ----------------PPGGLDLVFPTAKGNPMN----HNNMVNRYFLPGLKAAKLERIR 301 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + RHT+A L+ G N +I +Q+GH + +Y + N E L Sbjct: 302 FHDMRHTYASLLIDQGENIKYIQAQLGHSNPTVTLNVYAHLMKGTNREAACRLEDA 357 >UniRef50_C9XJT1 Integrase n=6 Tax=Clostridium difficile RepID=C9XJT1_CLODC Length = 380 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 52/407 (12%), Positives = 132/407 (32%), Gaps = 49/407 (12%) Query: 8 VEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 + R + ++ F ++ + + T ++A + + + F Sbjct: 15 IRKRNKNYVVYLEFEDEKTGKRKQKNMGTFDKKREASKRLNEVKESLYNDGF-------- 66 Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 T E + ++ T S K I + Sbjct: 67 --------LVPSEITVSEFLLDFLNKYSENISLATYNNYVSICKNYINPSIGKYKIQDLH 118 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 I NY ++L + +++ +I +L ++ AY+ I + Sbjct: 119 PVHIQNYIDKLSY--------------KLNPQSIKIHINILKLAIKRAYRLKLIKENVMD 164 Query: 188 GVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLE 246 ++ + + K + + + L++ K L A+ GLR E+ L W+++D E Sbjct: 165 SIEAPRYKKFKNEIYDREQMIKLLDLAKNTEMELPINLAIGLGLRISEVLGLTWDNIDFE 224 Query: 247 KGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 + + V + + ++ + PKT + +R ++ + + LKE + + Sbjct: 225 ENTITVNKITSRINGSVILKEPKTESSVRKISSPKELMSLLKEYKIKQNKNLLKSSIRNN 284 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 K+ + + ++ +++ + + RH+ Sbjct: 285 NNLLFFNKK---------------CEPIAEDVMSKKFKRFLEKNELPHIRFHDLRHSHVT 329 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 L+ + I+ ++GH +Y + +M+ E ++ L Sbjct: 330 LLINSKVPIKVISERVGHSNISTTLSVYSHVLKEMDKEASDKISESL 376 >UniRef50_Q0H247 DNA integration/recombination protein n=6 Tax=root RepID=Q0H247_9CAUD Length = 394 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 75/409 (18%), Positives = 135/409 (33%), Gaps = 68/409 (16%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR T +G+ K+A A + EIN+G + Sbjct: 28 GKRKTTTRRGF----KTKKEAQLAAAKLYDEINNGGYV----------------KDTNIL 67 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F + W I +T++ K +L + + + + + +L Sbjct: 68 FKDFAQEWLAIYSETAKISTIRARKHEL-GHLMRYFGNLKLKDVTRKMYQDMLLDL---- 122 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR------ 196 KKG T+D + + A + I++ P E K ++ + Sbjct: 123 ---------KKKGYADNTLDGIHTTGRMIFKKAMELELINSNPTEYAKVPKQKKTVEDIE 173 Query: 197 ---IKPDPLSKTEFNALMESEKGQ----SQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 L K E +++ + ++ Y+G+R GEL AL W+D++ ++ Sbjct: 174 SGNKDMKFLEKHELALFLKTAQEHGLAMDYVVFSTLAYTGMRLGELLALQWKDINFKEHT 233 Query: 250 VNVRRNLT------ILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 + + + L PPKT IRT+ + + LK+ + YH Sbjct: 234 IAITKTLYSPRNNERYYQLLPPKTQGSIRTIKVDPNIISLLKKHKAEQNEIKLRMGELYH 293 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRRNPYHTRHTFA 362 L FVF + R ++ A I + P+ RHT Sbjct: 294 ---------DLGFVFA-----RPSGFPEVPKKIEIRMKRLLRIANIHKHVTPHSLRHTHT 339 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 L+ AG I ++GH + IY D+ + + +S Sbjct: 340 SLLIEAGVGIKEIQQRLGHADIETTMNIYAHLTKDLEERASQKFSELMS 388 >UniRef50_Q8ETV2 Integrase n=3 Tax=Bacilli RepID=Q8ETV2_OCEIH Length = 392 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 69/404 (17%), Positives = 133/404 (32%), Gaps = 56/404 (13%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK+ R T +G+ K A + I+ E++ + T Sbjct: 29 GKKKRTTRRGF----KTKKDANIALSKILVEVDE----------------LGIRQNDQLT 68 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F E+ + W K E+ T+ +S+ + + + I S N Sbjct: 69 FQEVFEEWFKQHRREVKPTTVYAMESKFNRRILPVFGPYKMKDITRSHCQKAINGWAKEL 128 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN------- 195 +T +Y + R+A + I P + V + Sbjct: 129 ----------------KTFKDYKIQANQVFRYAMKMDMIKRNPMDYVTLPKLKHEMEYVA 172 Query: 196 --RIKPDPLSKTEFNALMESEKGQS--QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVN 251 K ++ E +E+ + + + ++G R GEL AL W DVD + ++ Sbjct: 173 ELEEKKHYYTREELRTFLEAIQKDDMAYTMLRLLSFTGARKGELYALHWSDVDFHQKSIS 232 Query: 252 VRRNLTILDMFG---PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 +++ L KT A R V++ L LK+ + Sbjct: 233 LKKTLIYTGGEKQLQTSKTKASRRIVSVDDETLAILKKWRSKQIQRYLTLELA-----AP 287 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA-GIRRRNPYHTRHTFACWLLT 367 + +F + Y ++ L + ++ + + + RHT A L Sbjct: 288 FQSDDKQPIFTVYNQLKHEMDYCRLAYLNDKLERIYQKNPELPQIKVHEFRHTHASLLFA 347 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 AGA+ + S++GH Q +IY D+ ++ M ++ Sbjct: 348 AGASIKDVQSRLGHTDIQTTMDIYTHVTDEAKEKTAEMFQKYMT 391 >UniRef50_C0XLK8 Phage integrase family site specific recombinase n=6 Tax=Lactobacillales RepID=C0XLK8_LACHI Length = 401 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 69/420 (16%), Positives = 131/420 (31%), Gaps = 64/420 (15%) Query: 8 VEIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRR 64 V +G F GKR R G K+A + + + Sbjct: 22 VRKKGNNWYYAFDTGTLNGKRSRIERSG----GKKKKQAEAPLRQALQKYEND------- 70 Query: 65 FPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPI 123 V + W + + EL NT + + I + I Sbjct: 71 --------GSVAKLTNMNVQQYFMYWYENYVQRELKPNTQINYLNIINKYIIPKIGNFRI 122 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY-QSGFIS 182 I + + N N+L + TV + ++ + A I Sbjct: 123 RSIGPAALQNLVNDL-------------GETKLAKHTVQIIVMVIKEGFKKAVYPYQLIK 169 Query: 183 TKPFEGVKKLQ------RNRIKPDPLSKTEFNALMESEKGQSQNLWKF--AVYSGLRHGE 234 P + + R K ++ ++ ++ + A +G+R GE Sbjct: 170 EDPARYIIMPKYHDDERITRKKLKIITMNQYEQILSITPPSNPFYIPLQIAFGTGMRRGE 229 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDM----FGPPKTNAGIRTVTLLQPALEALKEQYKL 290 + L W +VDL + V++ + PKT + RT+++ + ++ L++ K Sbjct: 230 VCGLTWTNVDLNGHTIEVKQAMMQESKGKFSIVTPKTTSSYRTISIGESLVDLLRQHKKH 289 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 R +YH VC + + +++ + + K G Sbjct: 290 QMEERLRYGQYYHES--------------NFVCTKENGIPVTPNTIKYQCDRIQKELGFP 335 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 N + RHT A LL GAN I +++GH + Y M + + + + Sbjct: 336 -FNFHSLRHTHATMLLEHGANIKDIQARLGHSRIATTMDTYSHVTHKMQRQTVNIFERIM 394 >UniRef50_B0PGN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN1_9FIRM Length = 402 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 67/368 (18%), Positives = 137/368 (37%), Gaps = 34/368 (9%) Query: 50 IVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKS 108 ++ + + L R ++ ++ T T GE D W + L NT++ + Sbjct: 39 VLAKTQKELLDKLHRDLEAFQDVEL-TEDSRMTLGEWLDRWMEDYGAATLRPNTLRSYEQ 97 Query: 109 QLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALL 168 ++ + +S + DI +L H + ++ + V A+L Sbjct: 98 FIRCYIKPYLGNKIVSRVTRMDIQKLYRKLKHEGRVREHPEHGHE--LSDTMVLRIHAML 155 Query: 169 CSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ--SQNLWKFAV 226 L+ A + I+ P +G + N L+K + + + + ++ + + Sbjct: 156 HRCLKDAEAAHVIARNPTDGAVVPKANHRPKQILTKEQMETFLAAVERNEIWRDFFYTEL 215 Query: 227 YSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALE 282 +GLR GE+ L W+D D + G + + R++ + G KT+ G RT+ L ++ Sbjct: 216 TTGLRRGEICGLMWQDFDEKAGTLKILRSVNVPKAGELEIGETKTSQGRRTIRLPPSTVQ 275 Query: 283 ALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNA 342 L+E+ + ++F + + S+ Sbjct: 276 RLRERKQH---------------------AVSQWIFPEPLA---PEKPVRPSAAYYWMKR 311 Query: 343 AVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQ 402 ++ AG+ + RHTFA LT+G + ++ +GH A + Y DM E Sbjct: 312 ILREAGLPTIRFHDLRHTFATHALTSGVDAKTLSGILGHTNASFTLDTYTHVTPDMQQEA 371 Query: 403 IAMLNARL 410 ++ L Sbjct: 372 SHIVGGFL 379 >UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GET2_9FIRM Length = 386 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 67/422 (15%), Positives = 142/422 (33%), Gaps = 50/422 (11%) Query: 1 MSKLPTG---VEIR-GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINS 56 M++ G + R + + GK + K + V ++ Sbjct: 1 MARRSKGEGSIYQRSDGRWQGRVVI-GKDEQGKTKYQFFYGKTKAEVTKAVKEAVGKVEK 59 Query: 57 GEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRII 116 G + TF E +IW K+ + +T ++ + Sbjct: 60 G----------------IDINAGKTTFTEWFEIWLASKKNNIKPSTYDTYETFWRVHIKS 103 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 + I+ + +E + R+V + + L+ A Sbjct: 104 ALGHMKLDKIQPHHVQKLLDE-------------KQGGELSPRSVRYIHTTINTALKSAL 150 Query: 177 QSGFISTKPFEG--VKKLQRNR-IKPDPLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRH 232 + IS P + ++ + + + PL++ + A + + K + ++ G+R Sbjct: 151 KQRIISFNPADAELLELPKNTKIKEVKPLTQDDVKAFIATAKEDKFSVAYILSLALGMRK 210 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQY 288 GE+ L WE++D E+ + ++ NLT + + PKT + R V L + L L E Sbjct: 211 GEVLGLQWENIDFEQKTLTIKNNLTRVKGKGLVLTTPKTASSNRVVLLPEKILTLLSEHG 270 Query: 289 KLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG 348 + R+ + K F V ++ ++ +++AG Sbjct: 271 RKQAVEREIA--------KASGKYSEAEGFDNMVFTYEEGKPVCPRYFERKFKKVLEKAG 322 Query: 349 IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 + + + RH++ AG N I + +GH A +Y ++ E ++ Sbjct: 323 LSQAGLHSLRHSYGTLQNEAGVNMKAIQATLGHSKASFTMSVYTQNTTELQREATQAVDK 382 Query: 409 RL 410 L Sbjct: 383 WL 384 >UniRef50_C9R814 Integrase family protein n=2 Tax=Ammonifex degensii KC4 RepID=C9R814_AMMDK Length = 391 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 71/410 (17%), Positives = 132/410 (32%), Gaps = 50/410 (12%) Query: 8 VEIRGR-YIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 V RG+ ++ + L + + A A ++ + + G Sbjct: 5 VRRRGKDSWQVIVYLGKDENGKKLYRSQTVRGTRQDAERALAELLVKAHRG--------- 55 Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 ++ T L + W + NT+ ++ + + + + Sbjct: 56 ------ELGRAPRGLTVAGLLNAWVEAHRRSWRPNTLANKRTAARAW-GRLIGHLEVERL 108 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 +D+ L T + LR+A + + P Sbjct: 109 TPADVELALARLAEE--------------YAPSTAKEVFSSFRQALRWARKRKLLHHDPT 154 Query: 187 EGVKKLQRNRIKPDPLSKTEFNALMESE-----KGQSQNLWKFAVYSGLRHGELAALAWE 241 EGV + + P + E +E + + ++ A+ +G+R GEL AL W+ Sbjct: 155 EGVPAPRGETQEITPWTGEEAARFLEYLEKARMRKAYKAFFRLALATGMRLGELQALRWQ 214 Query: 242 DVDLEKGIVNVRRNLTILDM-FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 DVDL++G V VRR + F PKT R + + L+E K R Sbjct: 215 DVDLKRGEVCVRRTYSEAGKCFHEPKTKKARRRIPIDPVTTAWLREWRKEQLEERLRAGE 274 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 + G VF R L A + AG+ + RHT Sbjct: 275 GWADREG--------LVFTTRKGT-----VVDRDDLLRALRRACREAGVPGIRFHDLRHT 321 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A LL +P + ++GH + + ++Y + + + + L Sbjct: 322 HASLLLRQNVHPKVVQERLGHASVKTTLDLYSHLLPGAQEPAVRAVAELL 371 >UniRef50_A5N1F6 Integrase-related protein n=3 Tax=Clostridia RepID=A5N1F6_CLOK5 Length = 416 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 72/401 (17%), Positives = 137/401 (34%), Gaps = 61/401 (15%) Query: 37 NSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-E 95 +++A L EI G + TF E W K E Sbjct: 41 GKQLEEANKQWVLFKDEIEKGIY----------------LDSGKITFEEFIKKWLKDYAE 84 Query: 96 TELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKG 155 EL T+ + K L T I ++ ++ + I + + L P G Sbjct: 85 AELAPKTLYRYKELLYTRIIPALGHIKLNKLQPTHITEFYSNLREDGIRNDGKPG----G 140 Query: 156 RTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTE---FNALME 212 + RT+ ++ L+ S+L A Q GFI P +K + + + + E L+E Sbjct: 141 LSERTILHHHRLISSILATAIQWGFILNNPALRLKAPKVEKKEARHFNIEETAYVLQLIE 200 Query: 213 SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT----ILDMFGPPKTN 268 +E + + + A+Y G+R GEL AL W D++ + + + ++L KT Sbjct: 201 NEPIKYKTMITLAIYGGMREGELTALTWSDINFDDCTIKINKSLQHLPGRDTFIKSTKTE 260 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 R +++ + LKE + + +H +F Sbjct: 261 T-TRLISIPISVMTLLKEYKRWQNTEKLKLGNLWHDSDALFTATDGKSIF---------- 309 Query: 329 PYYSVSSLGARWNAAVKRAG------------------IRRRNPYHTRHTFACWLLTAGA 370 S++ + +++ ++ N + RHT A L+ G Sbjct: 310 ----PSTISKWFLKFIRKHNESIINDDKIPPKDKSKYLLKEVNFHGLRHTSATLLINQGV 365 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + ++ ++GH +IY + + E L + Sbjct: 366 DITTVSKRLGHARTSTTTDIYSHSLQKADVEAADKLENLFN 406 >UniRef50_B9KXE0 Transposase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KXE0_THERP Length = 316 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 78/323 (24%), Positives = 132/323 (40%), Gaps = 32/323 (9%) Query: 94 KETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNK 153 + T L T +S ++ I P+ + + + ++LL Sbjct: 5 RRTSLRPRTWAGYESIVRVRIIPALGRLPLDKVEPQVLQAFASQLLT------------- 51 Query: 154 KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMES 213 +G +V++V N LL A + G + P + V + +R++ L+ E L+ + Sbjct: 52 QGLSVQSVQNTHPLLHRPFADAVKWGLLGRNPCDLVDLSRASRLQLRALTAPEVARLLAT 111 Query: 214 EKGQSQ-NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTN 268 L AV SGLR EL AL W D+D E+ +V R+L + + PPKT Sbjct: 112 CADDPLGPLVTVAVLSGLRLRELLALQWGDIDWERSEPSVVRSLQRVRGQGLVVVPPKTA 171 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 A R V L ALEAL+ Q + R + + + +VF + Sbjct: 172 ASRRRVPLSPLALEALRRQRRHQVEWRLAAGPTWA---------EGDWVFTSV-----RG 217 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 + R++ ++RAG+ R + RHT A LL G +P +AS +GH T Q+ Sbjct: 218 VPLDPAETTRRFHRLLERAGLPHRRFHDLRHTTASLLLADGVHPKVVASILGHSTVQVTL 277 Query: 389 EIYGMWIDDMNDEQIAMLNARLS 411 ++Y + + L ++ Sbjct: 278 DVYSRVTPGLARQAAERLQQLVA 300 >UniRef50_C1IAU4 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAU4_9CLOT Length = 390 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 72/397 (18%), Positives = 140/397 (35%), Gaps = 46/397 (11%) Query: 31 KGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIW 90 +G T N + +R + + + + + ++ T E +IW Sbjct: 23 RGSITTGRN-TEGKLIRKQFYGKTKREVLDKMNDYRD-KSSRGLIAKDEKITLEEWYNIW 80 Query: 91 T-KIKETELTTNTMKKTKSQLKTLRII-ICESTPISHIRYSDILNYRNELLHGETLYLDN 148 + K EL +T+++ + + + I NY N L+ Sbjct: 81 LFQFKANELKASTIERYNVFYRNYIKGCNIGQVKLKDLTAPIIQNYYNSLI--------- 131 Query: 149 PRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ---RNRIKPDPLSKT 205 K G+T TV L S L +A + +I + V + ++ K + Sbjct: 132 ----KNGKTPYTVKMLHKALKSSLSYAKRINYIGINCCDNVIPPKVINKDDDKFKVFTLE 187 Query: 206 EFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMF-- 262 E M K + ++ A+ +G+R GEL AL W+D++ ++ + V ++++ + Sbjct: 188 EQKKFMNVIKDHKYRLMFILALGTGIRIGELVALKWDDINFDECTLKVNKSISRSYIEIE 247 Query: 263 ---------GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK 313 PKT + IR V + L+ L K ++ + Y Sbjct: 248 GKRKFLLEETTPKTRSSIREVGIPSNILKELINHRKEQDEYKDNYKEIYT---------D 298 Query: 314 LHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPA 373 ++VF + Y +L + +K I + RHT+A L G Sbjct: 299 NNYVFTDAL-----GRYILPDTLSKAYLKVLKDNNIPHTRFHSLRHTYATRLFEKGVPLK 353 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + +GH + ++ +IY I + + LN Sbjct: 354 TVQKLLGHSSIKITADIYTHVIGNEKISAVEKLNDLF 390 >UniRef50_C1IBC3 Phage integrase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IBC3_9CLOT Length = 400 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 68/381 (17%), Positives = 132/381 (34%), Gaps = 43/381 (11%) Query: 46 LRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE-TELTTNTMK 104 +R + + + F + + T T + +W + + E +T+ Sbjct: 47 IRKQFYGKTKLEVLKKVDDF-KVKNTLGLSTIDEKTTVQQWIKMWLEEYKMNECRPSTID 105 Query: 105 KTKSQLKTLRIII-CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 + + + ++ + NY NEL+ KK +T T+ Sbjct: 106 RYFGIYRNYIENTNLGVVKLKDLKPLTLQNYYNELIK------------KKNKTTDTIKI 153 Query: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKLQ-RNRIKPDPLSKTEFNALMESEKG-QSQNL 221 +L +R A + I P V + + + + + E + + + + + + Sbjct: 154 INKVLSGGMRQAQKEQLILNNPCLFVTLPKSKVKEEVMTFTMEEQRIFLNAIEDSRDRCI 213 Query: 222 WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP------------PKTNA 269 + A+ SGLR GEL AL W D+D V V +++ + F PKT Sbjct: 214 FNLALGSGLRLGELLALKWSDIDFSSNEVKVSKSVKRVKCFDENTNTKTKIIEQLPKTRY 273 Query: 270 GIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKP 329 R + L + + LK + + Y + VF + Sbjct: 274 SERKIPLPKATINELKRHKNIILQEKLMAGDIYI---------DNNLVFPNVL-----GG 319 Query: 330 YYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYE 389 Y +L R+ + + +A I R + RHT+A L G + I +GH + + Sbjct: 320 YIDARNLTKRYKSILNKANIPYRKFHALRHTYATRLFENGVSLKVIQVLLGHSSMDITAN 379 Query: 390 IYGMWIDDMNDEQIAMLNARL 410 IY + + +L+ L Sbjct: 380 IYTHVLPKEKIRAVDVLDKCL 400 >UniRef50_A9KZM7 Integrase family protein n=4 Tax=Gammaproteobacteria RepID=A9KZM7_SHEB9 Length = 431 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 118/416 (28%), Positives = 195/416 (46%), Gaps = 24/416 (5%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGW-EITNSNIKKAGNLRALIVHEINSGEF 59 + KLP GVEI +RI FMF GKR RE LKG+ +IT S IK A N R I+ EI F Sbjct: 8 VEKLPVGVEINFNTVRIVFMFNGKRYREPLKGYSKITKSVIKYAENKRNTILTEIAENRF 67 Query: 60 EYLRRFPQSSTGAKMV-TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 +Y+ FP+S + + + W KI++ +T K +S+ K + Sbjct: 68 DYIAHFPESIKAMEFAGILIERRNVANGVNHWLKIQDVTKAKSTSKNYRSKSKHVINYFG 127 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 IS I S +L ++ +L G + +TV++ ++ + A++ Sbjct: 128 GDQLISEISRSHLLMFQANMLKA-------------GLSPKTVNDVFTIVRGVWYVAFED 174 Query: 179 GFISTKPFEGVKKLQRNRIK--PDPLSKTEFNALM--ESEKGQSQNLWKFAVYSGLRHGE 234 G I + P + + ++R+ ++ DP ++ E + ++ + N+ F ++GL E Sbjct: 175 GIIRSNPLDRISNIERDTLEETADPFTRDELERIAADDTSRRGDINMIMFCCWTGLSLSE 234 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 + ALAWED+D VN+RR + PK +R + L+ PA E L EQ + T Sbjct: 235 VIALAWEDIDTVNWTVNIRRARVLTQY-KVPKERGRVRVIELIDPAKEWLIEQMQHTMML 293 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 E+ R+ T+ + + FVF+ NGK + S+ + ++R +R R P Sbjct: 294 PTIELEVKQRDNITTKNENIRFVFL----NGKSGLPWYDHSVRRWFTGILERTKLRHRGP 349 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHTFA LL+ ++A Q+GH M+ + YG WI + + ++ L Sbjct: 350 NQCRHTFASQLLSNYVPLEWVARQLGHSDTTMIKKHYGKWIPKDSQKMANRVSEML 405 >UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integrase n=3 Tax=Lactobacillus RepID=Q38Y39_LACSS Length = 385 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 69/404 (17%), Positives = 137/404 (33%), Gaps = 62/404 (15%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK R T +G+ K+A +++ + +SG+ + + T Sbjct: 28 GKEKRTTRRGF----KTRKEARLALSMLELQADSGQLD---------------QQPINLT 68 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F ++ W + +TM K K + + I I S + N+ Sbjct: 69 FEDVYQQWWAGYINTVRESTMYKQKKVFQNHILPAFGKYRIRTITTSQVQTTLNKWFKQT 128 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIK--PD 200 ++ ++A G+I P V ++ + + Sbjct: 129 DYSFKPW---------------FNYTSAIFKYAILQGYIKDNPCTRVTMPKKLDKEDTLN 173 Query: 201 PLSKTEFNALMESEKG----QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL 256 K + + L++ ++G+R GE +L W+D++++K +++ + L Sbjct: 174 FWDKDQLKTFFNGIDPVNDLEKYTLFRVLAFTGIRRGECLSLTWDDLNVQKATLDINKTL 233 Query: 257 TILDM----FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 T D P KT G R ++L + L LK+ + G + Sbjct: 234 THGDKGRLLIQPTKTKKGTRVISLDESTLLYLKKWHLEQRRMYLML--------GYNINK 285 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG-----IRRRNPYHTRHTFACWLLT 367 +F + S+++ A + A + + RH+ A L + Sbjct: 286 SNQLIFATSKNT-----FKSLNTPSKWLRALIDDANKSGANLPSITVHGFRHSHASALFS 340 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 AGA+ + ++GHE AQ IY + E + L L+ Sbjct: 341 AGASIKEVQERLGHEDAQTTLNIYTHVTEKQGQEAVQKLVNFLN 384 >UniRef50_C8WVH7 Integrase family protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WVH7_ALIAD Length = 391 Score = 300 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 77/406 (18%), Positives = 133/406 (32%), Gaps = 41/406 (10%) Query: 12 GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTG 71 GR K+ T+ + R E + + + S Sbjct: 4 GRVFSYTTKSNEKKYGYTITITPADPQTGRYPQVTRKGFKSE-RAAKSAMMEHL--RSLE 60 Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 V T E W K + L T + L+ + PIS I I Sbjct: 61 DTPVVHAKSFTLHEWASRWFADKSSSLRPWTRRTYHHVLQAYILPELGKMPISKIEARHI 120 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 +L + TV +L + L A ++G++ PF V+ Sbjct: 121 QALYRKLSNR--------------LKPVTVHRIHRVLKTCLLAAVKAGYLDKSPFLNVEP 166 Query: 192 LQRNRIKPDPLSKTEFNALMESEKGQS---QNLWKFAVYSGLRHGELAALAWEDVDLEKG 248 + LS + L+ + A+++G+R GE+A L W D+DL+ G Sbjct: 167 PEHKTPPKPVLSVNDAFRLLAWLREHRPTSYMAAFLAIHTGMRMGEIAGLQWRDIDLDTG 226 Query: 249 IVNVRRNLTILDM----FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 ++ + R GPPKT R + + + ++ L+ + E + Sbjct: 227 VIQLERTRYRPKGGQDFLGPPKTFGSRRRIVVTREVVDELRRWKQSQQE---IERESWTP 283 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW 364 E V S +S A K G+ + + RHT A W Sbjct: 284 E--------------SFVVRLPNSAPPSPASFNNAIQNARKELGLPPVSFHGLRHTHATW 329 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 LL +G + ++ ++GH + + +IY D + E I L + Sbjct: 330 LLESGVDLKIVSERLGHSSITITADIYAHVTDALQREAIEKLQRMM 375 >UniRef50_B6W9U7 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W9U7_9FIRM Length = 370 Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 117/363 (32%), Gaps = 47/363 (12%) Query: 60 EYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 + + + + V + T EL W + E + T + K + Sbjct: 41 KKQAQIEYAKLKKQGVKSICNITLNELLKDWLPLYEPTVKYTTYTRVYGVFKNHILPYLG 100 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + + I I N+ + L L +FA G Sbjct: 101 NKKLDKITTPVIQKLINKKSQEIADF----------------KLINIYLNRLFKFAINQG 144 Query: 180 FISTKPFEGVKKLQRNRIKPD----PLSKTEFNALMESEKGQ----SQNLWKFAVYSGLR 231 + P + + + D K E + K +K A Y+GLR Sbjct: 145 YTDYNPCLNIIYPTIRKEQKDMSLEYWDKEELKEFLYHAKKDLDQMWYLFFKIATYAGLR 204 Query: 232 HGELAALAWEDVDLEKGIVNVRRNLTIL----DMFGPPKTNAGIRTVTLLQPALEALKEQ 287 GE+ AL W D+D + + V ++L++ PKT + IRT+++ + ++ L Sbjct: 205 KGEILALTWNDIDFKNKTLTVNKSLSVTRQSKKAITSPKTKSSIRTISIDKTTIKELYNW 264 Query: 288 YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA 347 + I Y + KQ +++S R+ +K+ Sbjct: 265 KIEQSKLKLQNINQY-------------------IFTTKQSELINLNSPRKRFERVIKKH 305 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 +R+ + RHT A AG + ++GH T++ IY ++ Sbjct: 306 DLRKIRLHSLRHTHASLCFEAGMTIKDVQHRLGHSTSKTTMNIYIHVTKSQEEKNGQKFE 365 Query: 408 ARL 410 + Sbjct: 366 KFM 368 >UniRef50_C6LG06 Prophage LambdaBa02, site-specific recombinase, phage integrase family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LG06_9FIRM Length = 429 Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats. Identities = 83/450 (18%), Positives = 141/450 (31%), Gaps = 80/450 (17%) Query: 9 EIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 RG+ F GKR R T G+ KA + +G ++ Sbjct: 7 RKRGKTWEYGFEGAKIAGKRNRITKGGF------RTKAE--------ALEAGNKALVQY- 51 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPIS 124 A + + + D W + L NT + ++ + Sbjct: 52 ----NSAGQSFSPSEISVADYLDYWMDNYCKMNLKYNTQLGYLNIIENHLKPKFGQYRLC 107 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ-SGFIST 183 I + I Y N L +G TV I+ L +A + ++ Sbjct: 108 AISAAPIQEYVNHLKT-------------QGYAKSTVSGIISTLSGAFNYAVEPMHYLQY 154 Query: 184 KPFEGVKKLQ--RNRIKPDPL-SKTEFNALMESEKGQSQNLWKFAV--YSGLRHGELAAL 238 P ++ + + + + S +F ++ +SQ + Y+GLR E AL Sbjct: 155 NPCNNIRYPKFRDTKTEARYIISPEDFQRIIARFDSRSQYYLPLMIGYYTGLRISEAFAL 214 Query: 239 AWEDVDLEKGIVNVRR-NLTILD--------------------MFGPPKTNAGIRTVTLL 277 W+D+DL+ ++V + L FG PKT RT+ Sbjct: 215 TWDDIDLDNRTLSVNKITLKRNYGVDVRTVLQNKGKKEEKSAWYFGTPKTAGSERTIKFG 274 Query: 278 QPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLH----------------FVFMPR 321 ALK K +R +Y Y + EK + Sbjct: 275 DALYHALKYAKKTQLENRLHYGEYYTDIYLKPEKDEKGDEIFRLIETERSIPCALNRANM 334 Query: 322 VCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGH 381 +C + Y S S I N + RHT A L+ GA+ + ++GH Sbjct: 335 ICVRENGQYVSTDSFKYCARVIHYDLKIA-FNYHSLRHTHATTLIENGADIKDVQERLGH 393 Query: 382 ETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + Q + Y D M+ + + +S Sbjct: 394 DNIQTTMQTYVHNTDTMSSRSVDIFEQAVS 423 >UniRef50_Q31DR3 Tyrosine recombinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DR3_THICR Length = 433 Score = 300 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 94/412 (22%), Positives = 155/412 (37%), Gaps = 44/412 (10%) Query: 8 VEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 V + F + RCRE T N KK + I EI G FEY + FP Sbjct: 6 VRRETNTLYFDFSYLKLRCREQTT-LHDTKINRKKLETILERINAEITLGTFEYGKYFPN 64 Query: 68 SSTGAKMVTTR--------VIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 SS AK+ F + + W E T +S L I Sbjct: 65 SSMLAKIEKATAKLVPGYTKTPLFKDFVEEWFSEMEPTWRKATADGYRSYLDKRLIPHFG 124 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 +S I ++IL YR + +T++ +I L ++ A Sbjct: 125 EMEVSSITKAEILKYRAHVAKQSAGK----------LKSKTINKFIKCLNMVMNEA-ADR 173 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALA 239 + T P +K L+ ++ DP S E N ++ + ++ ++G+R GE+ L Sbjct: 174 YDFTPPHLNIKPLKEEKVHIDPFSIEEVNQILAQVRSDWRDYLLVRFFTGMRTGEIDGLK 233 Query: 240 WEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 WE VD + + +R + + K + R + + L +++K Sbjct: 234 WEHVDFSRREILIRETYS-AGRWEYTKNDGSQREIEMSTLVYNTLSKRFKERDP------ 286 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 K VF C G P ++ + L W + ++ R PY TRH Sbjct: 287 -------------KSELVF----CTGNGAPVHTPNFLRRVWRPLLSYLKLKYRKPYQTRH 329 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 T A L AG NP +IA QMGH T M++ +Y ++ ++ + + + L+ Sbjct: 330 TAATIWLAAGENPNWIAKQMGHSTTSMLFTVYARYVPNLTRKDGSAMERLLA 381 >UniRef50_Q03GP3 Integrase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GP3_PEDPA Length = 384 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 70/419 (16%), Positives = 143/419 (34%), Gaps = 72/419 (17%) Query: 13 RYIRIWFMF-------RGKRCRETLKGWEITNSNIKKAGNLRALIVHEI-NSGEFEYLRR 64 IR F G++ +G+ K+A + + + EI G E RR Sbjct: 12 GKIRYEFQVYAGVDSLTGRQKTTRRRGF----KTRKEASIVLSRLELEIEKRGLQEDERR 67 Query: 65 FPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPIS 124 F F ++C W + + +T++KT+ + + I+ Sbjct: 68 F-----------------FRDVCAEWMEQYRLTVRESTLEKTQRIINIHVLPAFGDMVIN 110 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTK 184 +I + N+ ++ ++ + +A ++ ++ Sbjct: 111 NITPNVCQKVVNKWF----------------LEAKSYKKWLNYASMIFDYALRAEYVGRN 154 Query: 185 PFEGVKKLQRNR----IKPDPLSKTEFNALMESEKGQS----QNLWKFAVYSGLRHGELA 236 P V + + ++ E N + + +++ YSG+R GEL Sbjct: 155 PCTLVTMPRVQEQAGEKLENFWTRDELNTFFDYVTPERDVEQFTMFRVLAYSGIRKGELL 214 Query: 237 ALAWEDVDLEKGIVNVRRNLTI----LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 AL W+D++ E + V + LT + PPK+ AG RT+ L + L++ + Sbjct: 215 ALTWKDINFEDNTLRVNKTLTQGLGGKLIVQPPKSRAGRRTIDLDDSTMRYLRQWKGVQR 274 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 G VF + + S+++ N A+K G++ Sbjct: 275 ET--------FLGMGFNTNNVDQLVFAS-----NRNHFRSMNTPTKWLNKAIKATGLKHI 321 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHE--TAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + + RHT A L +G ++GH + + ++Y + N + Sbjct: 322 SIHGFRHTHASLLYQSGVGLKETQQRLGHSRADSSVTLDVYTHTTEQQNVAALQRFENY 380 >UniRef50_Q8ERR7 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERR7_OCEIH Length = 378 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 72/411 (17%), Positives = 141/411 (34%), Gaps = 60/411 (14%) Query: 13 RYIRIWFMFR----GK-RCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 + IR F+ GK R ++ L G+ K A + ++ E+ + + Sbjct: 12 KGIRYLFIIDINQSGKARKQKKLSGFT----RKKDAEDALKKLIIELENDGY-------- 59 Query: 68 SSTGAKMVTTRVIKTFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIII--CESTPIS 124 ++F W T + T +K I IS Sbjct: 60 --------LEPSKESFQSFLQHWFYTHYITSIKRTTHSNRDYLIKKHLIEDNPFAEKAIS 111 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTK 184 I +I + + L KG + + +L A + IS Sbjct: 112 DITTEEIDYFYHYKL-------------GKGYSTSYIRKMHQMLHLSFAQAVKWRKISYN 158 Query: 185 PFEGVKKLQRNRIKPDPLSKTEFNALMESEK-GQSQNLWKFAVYSGLRHGELAALAWEDV 243 P + + SK + +E+ + L+ A+Y+G+R GEL L W D+ Sbjct: 159 PVVNTTPPRVQTKQVSIWSKDQVKQFLETSNLERLYILFLLAIYTGMRKGELLGLKWSDI 218 Query: 244 DLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 ++EK +++ RNL + F PKT R + + + L+ + ++ Sbjct: 219 NMEKECIHIHRNLCYIQNQGYFFTTPKTVRSTRVIPISSLISDQLQCIKEKQQCEKELAG 278 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 Y + V + ++ + +K A + + + RH Sbjct: 279 PSY---------EDNDLVICTAL-----GKVQDPRNVTRVFERCIKNANVPKIRFHDLRH 324 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 T A L++ G + ++S+MGH + + +IY + + ++E + L Sbjct: 325 THASILISEGVDIVKVSSRMGHTSPKTTLDIYAHVVPNTDNEVATIFEKSL 375 >UniRef50_D1BL69 Integrase family protein n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BL69_VEIPT Length = 403 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 75/411 (18%), Positives = 144/411 (35%), Gaps = 46/411 (11%) Query: 19 FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTR 78 + +GK + + IT N +R ++ +++ +++ + + Sbjct: 17 YQSQGKWRGQ----FSITKDN----QLIRRAFSGNSKLEVYKLGKQWIEATQQNTSIFSS 68 Query: 79 VIKTFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNE 137 ++C+ W +K+ + T +K S L+ + + I+ I + N Sbjct: 69 KNTKLKDICNYWLQDVKKVSVKPKTFQKYDSTLRLYILPLLGEIKIASITPQQVQTVLNN 128 Query: 138 LLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI 197 +G + T+ L L +A G + P + K + Sbjct: 129 WSNG-----TLKGKKGHIISSSTIRCTRRYLSELFEYAVNIGLLLKNPIKLTKAPRLITT 183 Query: 198 KPDPLSKTEFNALMESEKGQ---------------SQNLWKFAVYSGLRHGELAALAWED 242 + LS E + L + K Q S K A+ +G+R GE+ L W+ Sbjct: 184 EIHTLSLDEIHQLTSTMKQQVSNNISSPYRINYYSSYIATKIALGTGMRLGEVFGLCWDC 243 Query: 243 VDLEKGIVNVRRNLT---ILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 VDL G ++VRR + +F KT R + + Q L + ++ K Sbjct: 244 VDLIHGHISVRRTIQTGTKGQIFQDTKTKTSRRCIPISQELQSELTTYKEFQSNYAKELG 303 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG-ARWNAAVKRAGIRRRNPYHTR 358 + YG V +G S S+ + +K+ + + R Sbjct: 304 DKWTDSYGV-------------VISGTFGKILSTSNFKSRYFIPILKQLNLDHITFHDLR 350 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 HT A LL+ NP + ++GH T + + Y + D+ E + L+ Sbjct: 351 HTHATLLLSQKINPKIVQERLGHSTITLTLDTYSHLVPDIQKEAVKALDNL 401 >UniRef50_C4FP65 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FP65_9FIRM Length = 357 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 73/405 (18%), Positives = 139/405 (34%), Gaps = 60/405 (14%) Query: 12 GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTG 71 ++ + GKR + K A R V + Sbjct: 7 DGRYQVSKLINGKRKYFY-------GTTKKAAIAERDAYVE-----------------SL 42 Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 A+ T C+ W ++K ++ NT+ + +KT + S + + ++ Sbjct: 43 AQCANYDNTITTERWCEYWIRLKTDTVSQNTLSSYQYIIKTYIVPFIGSIRLVELSALNV 102 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 + + H + RT+ + +L ++L+ A IS VKK Sbjct: 103 RALMDSMSH---------------LSARTISYTLTVLRAILKQAVMDEIISKNVATLVKK 147 Query: 192 LQRNRI-KPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 ++ R + LSK E +E + L+K A +GLR E+ L W+DV+L++ Sbjct: 148 PKQERKREMVTLSKEEVETFLEQIDDVEWHALFKLAFTTGLRRSEILGLTWDDVNLKQKT 207 Query: 250 VNVRRNLTILDMF----GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 + V + + +D K ++ R+++L + L + R Sbjct: 208 LTVNQTVLRIDEVTTISKTTKNSSSRRSISLDDKTIAELLKLRTCVDKRRLKA------- 260 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWL 365 + + VF GK + + + G + TRHT A L Sbjct: 261 ---PNWRNNNLVFP-----GKFGNPRDPAKVSLKCKKFATAIGRPDFTMHDTRHTHATLL 312 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 L AG N + ++GH + Q + Y M + + ++ Sbjct: 313 LEAGVNFKVVQMRLGHSSYQQTMDTYSHVTPIMEADVVEKISNIF 357 >UniRef50_B2TMD1 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=3 Tax=Clostridium RepID=B2TMD1_CLOBB Length = 386 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 69/417 (16%), Positives = 140/417 (33%), Gaps = 51/417 (12%) Query: 7 GVEIRGRYIRIWFM--FRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRR 64 V +G + G + + KG K+A ++ N+G Sbjct: 4 SVRKKGNVWYYRYYEYVNGVKKQIERKG----GITKKEALQKLNEEIYRQNNGLL----- 54 Query: 65 FPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPI 123 + IW + + + NT K K + + Sbjct: 55 ------------KPKEILLKDYLKIWLEDYVKPNNSENTYIKYKGTVNKYINPQLGLIKL 102 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 ++ +I + ++L K ++ T+ + +L L A + ++ Sbjct: 103 CDLKVINIEQFLSKL-------------KKTKLSLTTIQKHYLVLNGALNKAIKLQMLND 149 Query: 184 KPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQ-NLWK-----FAVYSGLRHGELAA 237 P + V +R++ K L+ E +++ + + + + +GLR GE+ Sbjct: 150 NPCKYVDTPKRSKYKASILTFEELHSIYTNLNTKIYEDYIMKLGMDLTIETGLRRGEMCG 209 Query: 238 LAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 L W D+D + I+NV L ++ KT++ R + L ++ LK + Sbjct: 210 LQWSDIDFDNKILNVNTALIRVNNDYKISNLKTDSSYRKLPLSNEIIKILKSHKSKQNIN 269 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRRN 353 + Y + + K + + Y S+ R K I + Sbjct: 270 K----IKYGNNFVYSNKFDGDSTEYNLIFTWENGRYIIPSNFLQRLKRLCKYCKIEKNIR 325 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RH+ A LL + I ++GH Q +IY ++MN E +++ L Sbjct: 326 WHDLRHSNATILLKNKISMKVIQERLGHSLMQTTSDIYAHVTEEMNREATDVISNVL 382 >UniRef50_C3IU95 DNA integration/recombination/inversion protein n=2 Tax=Bacillus thuringiensis RepID=C3IU95_BACTU Length = 392 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 73/408 (17%), Positives = 133/408 (32%), Gaps = 68/408 (16%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR ++ ++G+ K+A A I E+ +G + Sbjct: 28 GKRKQKKVRGF----KTKKEAQLAAARIEQEVANGTY----------------INEPDIL 67 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F + W I ++++ + Q + + + I N+L Sbjct: 68 FKDFVQEWLNIYSKSTKISSLRVRQKQSNK-LVDFFANIKMKDITKKMYQTALNDL---- 122 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR-------- 194 + KG T+D + + A + I + P + VK ++ Sbjct: 123 ---------HDKGYAFNTLDGIHTAGRMIFKKAIELQIIKSNPTDNVKLPRKVETVEDIE 173 Query: 195 -NRIKPDPLSKTEFNALMESEKGQ----SQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 ++ L K E ++ K + + YSGLR GEL AL W DVD E Sbjct: 174 NDKKAIKYLEKEELAHFLQVAKEKGLDNDYVFFSILAYSGLRAGELLALKWTDVDFENNT 233 Query: 250 VNVRRNL------TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 + + + L + PKT IRT+ + Q ++ LK + Sbjct: 234 IKITKTLYNPDNNSQHYHLLTPKTKGSIRTIKMDQGIMKLLKSHKAKQNELKLY------ 287 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRRNPYHTRHTFA 362 + +V V + + R +K + I + P+ RHT Sbjct: 288 --------TRPQYVDQGFVITKASGYPEVMKMIQNRLKRLIKLSNITKNITPHSFRHTHT 339 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 L+ AG I ++GH + IY +M ++ + + Sbjct: 340 SLLIEAGVGIKEIQQRLGHTDIETTMNIYAHMTKNMEEKASQKFSELM 387 >UniRef50_C2Z776 Prophage LambdaBa04, site-specific recombinase, phage integrase n=10 Tax=Bacillus cereus group RepID=C2Z776_BACCE Length = 379 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 80/416 (19%), Positives = 148/416 (35%), Gaps = 63/416 (15%) Query: 9 EIRGRYIRIWFMF-----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 RG GKR +++ G+ K+A N A ++ EI G + + Sbjct: 6 HKRGDKWSFTIDVGIDPMTGKRKQKSKGGF----RTKKEAQNAAANMITEIEKGMYFDDK 61 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK---ETELTTNTMKKTKSQLKTLRIIICES 120 + + DIW K+K + EL + +K S +K + Sbjct: 62 QLS-------------------VLDIWGKLKPIRKAELKITSYEKDMSLVKLYILPTFGY 102 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 I I+ I +Y EL +KG + T+ N + + A + Sbjct: 103 KKIKSIKPVIIQSYYAEL-------------KEKGLSNGTISNIHRCFRCIFKHAVEWEI 149 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAA 237 + VKK + + + S E N + K + + A+Y+G+R GEL A Sbjct: 150 LHDNIMNKVKKPREEQGEMKTWSSKECNRFLHYLKEKNKKYYIFFLLAIYTGMRRGELLA 209 Query: 238 LAWEDVDLEKGIVNVRRNLTILDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 L W+D+D + + V ++L + KT + R++++ + L+ Y Sbjct: 210 LTWKDIDFDNKRILVNKSLVKTEEGLFKAATKTKSSNRSISISSFVVTELQSYYAYKKKE 269 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 + E ++F + + + K+AG+ R Sbjct: 270 FFRWGIHLNEE---------AYIFAGNTIHS----PLHIDAPHRFLKDHYKKAGVPRIRI 316 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RHT A +L AG +P + ++GH + QM + Y +M + + Sbjct: 317 HDLRHTHATLMLQAGEHPKIVQDRLGHSSIQMTLDKYSHITQNMQQQAAENFENVI 372 >UniRef50_A0JQR3 Phage integrase n=3 Tax=Lactobacillus salivarius RepID=A0JQR3_LACS1 Length = 381 Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 137/399 (34%), Gaps = 57/399 (14%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK+ +G+ ++K A + I + +++ ++ F +G Sbjct: 29 GKQRYIRRQGFT----SLKAAKDELLKIEYLVSTNQY-----FKSVKSGK---------- 69 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 FG++ D W + + + +T + + + + + I ++ N+ Sbjct: 70 FGDVLDEWLALHKETVKASTWQFIELRANNHVRPYFKDMYVDKITLRHCQDFVNKTFKKA 129 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN----RIK 198 + ++ V N L +A + G I + P V K ++ Sbjct: 130 PVAYV--------YSLSIVKNT-------LDYALRLGMIESNPMLYVIKPKKQASISDKH 174 Query: 199 PDPLSKTEFNALMESEKG---QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 + +K E ++ K + L++ YSG+R GE AL W D+D + + + + Sbjct: 175 DNYYNKDELKKFLDVAKDTSLKKYTLFRLLAYSGMRIGECLALTWHDLDYKNNTIAINKT 234 Query: 256 LTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 L + PKT A R ++L ++ LK Sbjct: 235 LARTNNGIKIQTPKTKASNRVISLDNETIQVLKMWQLEQRKQLLKVGI--------NAMD 286 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 +F + + V ++ K+AGI + RHT A L +G + Sbjct: 287 SKQLIFSNGKNS-----FIIVPTVRLAIKQIAKKAGIHSITTHGFRHTHATLLFASGLDI 341 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + +++GH Q IY + + D+ ++ Sbjct: 342 KQVQARLGHSNVQTTLNIYTHAMKEKQDKIGDEFAKYIN 380 >UniRef50_B2TKJ3 Phage integrase family protein n=4 Tax=Clostridium RepID=B2TKJ3_CLOBB Length = 385 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 79/424 (18%), Positives = 138/424 (32%), Gaps = 62/424 (14%) Query: 4 LPTGVEIRGRYIRIWFMF---RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 + V RG +F GKR + G + K+A + E ++ Sbjct: 1 MQGSVRKRGNKWYYYFDVAKSDGKRKKIERAG----GNTKKEALEALRKALSEYDN---- 52 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE-TELTTNTMKKTKSQLKTLRIIICE 119 + T + + D W +T K +K Sbjct: 53 -----------VGTIITESNISVSDYFDYWFNEYVLINCKYSTQVSYKRLIKNHLKPSLG 101 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY-QS 178 + I S + N + G + + N +L ++A S Sbjct: 102 IYQLKKITSSRLQELIN-------------LKYRNGFSKNYLGNLYGVLSGAFKYAVYPS 148 Query: 179 GFISTKPFEGVKKLQRNRI------KPDPLSKTEFNALMESEKGQSQNLWKF--AVYSGL 230 FI P VK + N ++ ++N +++ S + +GL Sbjct: 149 NFIKENPMTFVKMPKYNTKLINNPDDLKIITLEDYNNILKRFPYGSNMYIPLQISFNTGL 208 Query: 231 RHGELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKE 286 R E+ +L W+ +D E + V + L + +FG PKT++ RT+ + L LK+ Sbjct: 209 RAAEVMSLTWDCIDFENQTLRVEKILYRNEFKKWVFGSPKTHSSYRTIKIGNTLLSLLKK 268 Query: 287 QYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKR 346 +K ++ FY K FV C + + SL Sbjct: 269 FHKDQKENKLRYGPFY-------VKHDYDFV-----CLKENGELLTTDSLKYLSKVVNYE 316 Query: 347 AGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 GI + RHT A LL AGAN I ++GH ++Y M+ + + + Sbjct: 317 LGI-DFKFHSLRHTHATMLLEAGANIKDIQQRLGHSKLATTMDVYSHVTKKMSQDSVRLF 375 Query: 407 NARL 410 + Sbjct: 376 EEAI 379 >UniRef50_A0KWT4 Phage integrase family protein n=5 Tax=Gammaproteobacteria RepID=A0KWT4_SHESA Length = 407 Score = 297 bits (761), Expect = 6e-79, Method: Composition-based stats. Identities = 92/424 (21%), Positives = 163/424 (38%), Gaps = 53/424 (12%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 + R + F + G RCRE N K N+ I EI F + FP Sbjct: 3 NIRARDGKLFFDFTYEGIRCREQT-VLIDNRLNRSKLTNILNTIEAEIRLNRFVFKSYFP 61 Query: 67 QSSTGAKMV--------------------TTRVIKTFGELCDIWTKIKETELTTNTMKKT 106 SS ++ I TF E W + + + K Sbjct: 62 SSSRCSQFSEYDIRVQQHLAENVEPLTVNIMSNIPTFEEFVGEWVVENKIQWKKSHCKNI 121 Query: 107 KSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIA 166 + ++ + ++ I ++ +R + + + +++ + Sbjct: 122 QMIIECYLLPAFGHIRLNEITRPSLIKFRASIADSRRTGTT------EKLSNDWINHVMT 175 Query: 167 LLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAV 226 L +L A F PF +K L+ ++ +P S E +E + +N + Sbjct: 176 PLRGILNEA-ALRFDFPTPFVNIKPLRIDKTVIEPFSLAEVQYFLEHIRDDFRNYYTVRF 234 Query: 227 YSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKE 286 ++ +R E+ L W+ V+L++ + ++ L PKT+A R++ L QP ++ALK Sbjct: 235 FTAMRTAEIDGLKWQFVNLDRYEILIQETLV-DGYVETPKTSASYRSIQLSQPVVDALKR 293 Query: 287 QYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKR 346 Q K+TG+ +VF CN P + W A+ Sbjct: 294 QRKVTGNK--------------------TYVF----CNASGNPLEHRNVTKRIWYPALDE 329 Query: 347 AGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 ++RR PY TRHT A L AG NP +IA QMGH T +M++E+Y ++ + + + Sbjct: 330 MCLKRRRPYQTRHTCATLWLAAGENPEWIAKQMGHSTTKMLFEVYSRYVPNATRQDGSAF 389 Query: 407 NARL 410 + + Sbjct: 390 DRLI 393 >UniRef50_D2S5L4 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5L4_9ACTO Length = 404 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 76/392 (19%), Positives = 126/392 (32%), Gaps = 53/392 (13%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR G+ A A + + G V +T Sbjct: 6 GKRSTMRRGGFP----TKAAANRALADVANRTAQG-----------------VRVDDRET 44 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 W ++K E T++ ++ ++ + + PI +R + Sbjct: 45 VASFLARWLQVKAGEAKPTTVRSYRAHVERVIVPAIGHVPIEELRAEHVEQLL------- 97 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 GR TV A L S L + ++ + V R + P Sbjct: 98 -------VDAANGRGPVTVRRIHATLRSALSYGVKTRRLPFNVASNVTPPNGIRPEVQPW 150 Query: 203 SKTEFNALMESEK-GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD- 260 S E A + + + L++ GLR GE L W D+DL +R+ + + Sbjct: 151 SAAELAAFLRHVETDRLGPLFEVIAACGLRRGEALGLRWSDLDLANRTARIRQTIVDVGG 210 Query: 261 --MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVF 318 F PKT + TV L + A++AL + R+ YH VF Sbjct: 211 RLQFSTPKTRSSEATVPLTERAVQALLQVRLGQDLDRQGWGGAYHA---------HDLVF 261 Query: 319 MPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQ 378 + R+ A K AG+R + RH A +L AG A ++ Sbjct: 262 A-----RENGAPLRPEYATRRFVALTKAAGLRWVRLHDLRHGAASLMLAAGVPMAIVSKV 316 Query: 379 MGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + H + + + YG +D + A L Sbjct: 317 LRHSSIGITVDTYGHLSEDTVRTASDAMAAAL 348 >UniRef50_UPI0001C375E4 hypothetical protein RflaF_02473 n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C375E4 Length = 399 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 64/415 (15%), Positives = 135/415 (32%), Gaps = 46/415 (11%) Query: 8 VEIRGRYIRIW----FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + RG +I + G + +T+ N K+ Sbjct: 4 IRKRGNSYQIRVSCGYDTSGNQVVQTMTWKPADGMNKKQIEKELQK-----------QAI 52 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 F ++ F + + W + + L + ++ K L Sbjct: 53 LFEDKCMKGQVTA---NIKFQDFAEQWFEEYAKLNLRNTSYERMKQ-LTVRVYPAIGHLR 108 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + I I + N+L N + + +T ++++ + + +A + ++ Sbjct: 109 LDKITSRHIQQFINDLA-----LNGKSLKNGRPLSRKTAVHHLSFISDVFSYAVKMEMLT 163 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFN---ALMESEKGQSQNLWKFAVYSGLRHGELAALA 239 P + V + + + D + E L+E+ + + + A+YSG R GE+ L Sbjct: 164 DNPCKRVTVPKGEKKEKDIYTLEEVAHLFQLLETAPLKYRVFFTLAIYSGFRRGEMLGLE 223 Query: 240 WEDVDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 W+D+D E +++VRR G KT R++ Q ++ L+E R Sbjct: 224 WKDIDWEHNVISVRRTSNYTASKGIYTDTTKTKKSQRSLKFPQSVMDLLREYKAEQDEER 283 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 T + R+ + ++ + R + + Sbjct: 284 VKLGTKWQD--------------YDRLFVKWDGRPMNNNTPYFWLKEFCEENNFRFCDIH 329 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RH +A L+ G + A ++ +GH T IY + + + L Sbjct: 330 SLRHFYASALINEGVDAATVSGALGHSTITTTTSIYCHVFNQAQARAGDAIASVL 384 >UniRef50_UPI0001C35B62 integrase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35B62 Length = 406 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 74/420 (17%), Positives = 135/420 (32%), Gaps = 57/420 (13%) Query: 6 TGVEIRGRYIRI--WFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 G+ R + ++ GKR + +A N A +E Sbjct: 12 KGIYQRKDGLYSARYYSKNGKRKERYFETLP-------EAKNWLADARYEERH------- 57 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI 123 ++ T T + W + +L NT + + + K + + I Sbjct: 58 ---------NLIVTSPDMTVDKWFTYWIENIVCDLAPNTKRNYQERYKWNIQPVIGAMCI 108 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 + ++ N + T+ + ++L+ A + I+ Sbjct: 109 ADVKPMHCKAVLNRMETT--------------YAGSTIRQAYITMGTMLKSAVMNDIIAK 154 Query: 184 KPFEGVKKLQRNR--IKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAW 240 P GV+ + R L+ E +E+ + + + + +GLR E+ L W Sbjct: 155 HPMNGVRYTKPVRAVDDIKYLTVEEQEKFLEAAARSHNYRQYALLLETGLRTAEMIGLTW 214 Query: 241 EDVDLEKGIVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 + +D + + V ++L GPPKT RT+ L A LK Y + Sbjct: 215 DAIDWKNRTLTVNKSLEYRHSQGYWRAGPPKTQKSYRTIPLTDKAYSILKSCYDEKDSRK 274 Query: 296 KSEITFYHREYGRTEKQKL------HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 SE EY + + VF+ N + SS AGI Sbjct: 275 SSETLSQVLEYIDSRTGENKCLIMRDLVFV----NWRTGEPAKNSSYDTHLYKLCDEAGI 330 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 +R + RHT+A + G P + +GH + + + Y D+ I Sbjct: 331 KRFCMHALRHTYATRAIERGVQPKVLQQLLGHASIKTTMDRYVHVTDESLVNAIRQFQQA 390 >UniRef50_C5WEI1 Site-specific recombinase, phage integrase family n=9 Tax=Streptococcus RepID=C5WEI1_STRDG Length = 384 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 66/382 (17%), Positives = 140/382 (36%), Gaps = 32/382 (8%) Query: 37 NSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKET 96 + ++A +++ + ++E + ++S + KT+ E+ + W + + Sbjct: 24 TRDAQRADHIKRGFRTRKEAKDYEARLIYLKASGRLEEFIKPTHKTYNEIFEKWYQAYQD 83 Query: 97 ELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGR 156 + T +T + + + PIS I D N+ E Sbjct: 84 TVEPTTASRTLDIFRLHILPVMGDLPISKISPLDCQNFITEKAKVF-------------- 129 Query: 157 TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP-DPLSKTEFNALME--- 212 + + + + FA + + P + +R + + + + E + Sbjct: 130 --KNIKQIKSYTRKVFDFAIKMKLLKHNPMTEIIMPKRKKTRIENYWTVQELQEFLAIVL 187 Query: 213 -SEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTN 268 E + L++ YSGLR GEL AL W D+D + ++V ++L LD + K + Sbjct: 188 QEEPYKHYALFRLLAYSGLRKGELYALKWADIDFQSETLSVNKSLGRLDGQAIEKSTKND 247 Query: 269 AGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQK 328 +R + L + L+E + + K F+F G Sbjct: 248 FSVRKIKLDSETISILQEWKSINQKEKAQLAVA-------PLSIKQDFIFTYCTRTGSI- 299 Query: 329 PYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVY 388 + + +++ +R+ +P+ RHT A ++ G +P A ++GH ++QM Sbjct: 300 EPLHADYINNVLSRIIRKHSLRKISPHGFRHTHATLMIEIGVDPVNTAKRLGHASSQMTL 359 Query: 389 EIYGMWIDDMNDEQIAMLNARL 410 + Y ++ D I L Sbjct: 360 DTYSHSTNNGEDRSIKQFADYL 381 >UniRef50_C2NSI2 DNA integration/recombination/invertion protein n=2 Tax=Bacillus cereus group RepID=C2NSI2_BACCE Length = 382 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 115/348 (33%), Gaps = 33/348 (9%) Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHI 126 ++ + + T+ D W K + L T + K+ + + + I Sbjct: 56 KAKMLSGERSDLSKLTYAAYVDEWMKERTFHLQETTYEIHKTYIANVIKPRLGHFQMREI 115 Query: 127 RYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF 186 + + NEL G + TV ++ + L+ A I P Sbjct: 116 EPIHMQKFVNELAIDI------------GYSPATVHLIYRIVSASLKKAKVLKLIDENPT 163 Query: 187 EGVKKLQRNRI-KPDPLSKTEFNALMESEKG-----QSQNLWKFAVYSGLRHGELAALAW 240 G+ + + + + + E N + K + A+ +G+R GE+ L W Sbjct: 164 IGITLPKLRKTSEINVWTLEEVNHFINEGKNVYRSTRMYICCVIALLTGMRQGEIMGLRW 223 Query: 241 EDVDLEKGIVNVRRNLTILDMFG-PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 +D+D E I+ +R+ LT K NA IR V + L+ + R Sbjct: 224 KDIDFENRIIYIRQTLTQSGKIKVGAKNNASIRNVHFPIKLIGELELHRETVKKERLYHG 283 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 Y V ++ + + ++ G+ + + RH Sbjct: 284 KDYEDN--------------NLVICARKGNPLIPKNGRIEFYNLTEKLGLPKIRFHDLRH 329 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 T A L+ N I+ ++GH Q Y + +M E L+ Sbjct: 330 THATMLIQQNVNVKLISERLGHTDIQTTLNTYSHVLPNMQREVADKLD 377 >UniRef50_C9AZK9 Phage integrase n=6 Tax=Enterococcus RepID=C9AZK9_ENTCA Length = 410 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 125/347 (36%), Gaps = 41/347 (11%) Query: 78 RVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNE 137 + F ++ W + + + +T + L + + IS I N Sbjct: 62 ESNRLFSDIALEWFEQYKNTVKESTYVVQRVALNKHILPLFGERRISKISIPYCQKQVNH 121 Query: 138 LLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR--- 194 S K + N I + S+ ++A I P EGV + +R Sbjct: 122 W-----------YSYYKKYS-----NLIGMTNSIFQYAKSLRLIRRNPMEGVIRPKRQKQ 165 Query: 195 ---NRIKPDPLSKTEFNALMESEKGQS---QNLWKFAVYSGLRHGELAALAWEDVDLEKG 248 + +K E ++ K ++ ++GLR GEL AL W+D+D ++G Sbjct: 166 IDEEKYTAPFYTKAEVLYFLQIAKKYPDPLYPMFHILTFTGLRKGELLALRWKDIDFKRG 225 Query: 249 IVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 ++V++ LT ++ F PKT +RT+++ L ++ F+ + Sbjct: 226 TLSVKQTLTTVEDWKLAFQTPKTEKSLRTISIDNQTLSIFRQCILKQKA-------FFLK 278 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW 364 + + +F ++ Y + L +K ++ + RHT Sbjct: 279 TGRKPVENGAQLLFTT-----EENKPYYLDFLNHNLTKILKENKLKHMTVHGFRHTHCSL 333 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 L +GA+ + ++GH + +IY + +E ++ Sbjct: 334 LFESGASIKEVQVRLGHTDVRTTMDIYAHVSEQKKEETADRFADYMN 380 >UniRef50_D1PRY2 Site-specific recombinase, phage integrase family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRY2_9FIRM Length = 391 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 69/424 (16%), Positives = 135/424 (31%), Gaps = 55/424 (12%) Query: 6 TGVEIRG-RYIRIW----FMFRGKRCRETLKGWEI----TNSN-IKKAGNLRALIVHEIN 55 + RG I + + G R + K T S K L E+ Sbjct: 2 ASIRKRGQNSYLIVVSRGYDYEGNRLKAAQKTVHPPKDLTPSQCKKWLNEQAVLFEREVR 61 Query: 56 SGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLR 114 T + W + + L +T + + ++ Sbjct: 62 HD----------------PQPVNHAMTLAAYTEHWLRDIAPDKLAASTYSRDQQDIRR-I 104 Query: 115 IIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRF 174 + ++ +R I + + L + + R+V+ LCS+L Sbjct: 105 LPALGHYKLTDLRKETIRAFYEAMRSEPKLTD------GQPLSERSVEGLHNTLCSILSG 158 Query: 175 AYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ---SQNLWKFAVYSGLR 231 A G+++ P V K + R + + ++ + + Q + +K + +G+R Sbjct: 159 AVDEGYLTHNPAWRVYKPKGVRKERPVADEETVQKMIAALETQSMKYEVYFKLVLATGMR 218 Query: 232 HGELAALAWEDVDLEKGIVNVRRNLTIL---DMF-GPPKTNAGIRTVTLLQPALEALKEQ 287 GE L W D+D ++V+R + L +F PKT +G R V + + + LK Sbjct: 219 RGEACGLRWSDIDWRHRTIHVQRTVVKLSGQKIFTKEPKTASGNRRVYISKEMCKLLKAW 278 Query: 288 YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA 347 + + + + ++ R+ +K Sbjct: 279 KQECAWQMEQA-------------EGQTLTEEDYLFRQPSGDPMVPTTFTFRFKKILKEN 325 Query: 348 GIR-RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 G+ + + RHT A L+ G + +A +GH +IY D E L Sbjct: 326 GLPQNLSVHSLRHTNASLLIAQGVDVRTVAGLLGHSQPSTTLDIYAHAFDKTKREAQEKL 385 Query: 407 NARL 410 + Sbjct: 386 GKVM 389 >UniRef50_C7T893 Phage integrase n=5 Tax=Lactobacillus RepID=C7T893_LACRG Length = 385 Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats. Identities = 66/410 (16%), Positives = 124/410 (30%), Gaps = 42/410 (10%) Query: 14 YIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAK 73 I+ + GK K +R + R S G Sbjct: 3 SIKKYATKDGKEFWRVQVFAGNDLQTGHKKYKVRRGFKTK-KEATVAAARLELAISNGDL 61 Query: 74 MVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 F ++ + W + +T +T + I+ I D+ Sbjct: 62 EEEKPKPVFFRDVYEEWYGNYINTVRESTWARTAGMFNNHILPAFGGKRIATITTKDVQK 121 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 + + + S++ +A + G++S P + V Sbjct: 122 AVKRWFEFT--------------SANY-KRWYNYVSSVMDYAVRQGYMSKNPAKAVVLPH 166 Query: 194 RNR----IKPDPLSKTEFNALMESEKGQSQN----LWKFAVYSGLRHGELAALAWEDVDL 245 + + +K + N ++ +++ ++G+R GEL AL W DV Sbjct: 167 HDDLAGDKPENFWTKEQMNHFFACIDQENHFDVFIMFRVLAFTGVRRGELLALTWNDVSF 226 Query: 246 EKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 ++ + V + LT D + PKT AG RT+ + + LK ++ Sbjct: 227 KENSIKVNKTLTQGDKGHQIVQAPKTRAGRRTIPVDGQTMAYLKRWRRIQQETFLQLGI- 285 Query: 302 YHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRRNPYHTRHT 360 Q +F Y S+++ R + G+ R + RH+ Sbjct: 286 -------NTMQPNQLLFTNTKNG-----YQSLNTPSKRLHKLQDDNGLTPRITIHGFRHS 333 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 F LL AG + +GH + +Y E A L + Sbjct: 334 FISNLLIAGVPVTSVQKLVGHTDPTITLGVYAHVSAKQESEATAALAKYM 383 >UniRef50_B0ABY5 Putative uncharacterized protein n=3 Tax=Clostridium RepID=B0ABY5_9CLOT Length = 370 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 56/411 (13%), Positives = 147/411 (35%), Gaps = 58/411 (14%) Query: 8 VEIRGRYIRIWFMFR----GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + R + ++ + GK+ ++ + + + + A + EI Sbjct: 6 IRKRSKNYIVYLEYTDETTGKKKQKNMGSYPL----KRDASKRLNELKEEI--------- 52 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI 123 + + + + + L+ T K + + + Sbjct: 53 -------YNDDLVAPNDMKLEKYLMDFLEKYKPNLSITTYNCYIRICKKYINPMLGNIKL 105 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 + ++ I NY ++L+ + +T+ +I +L L+ AY+ + Sbjct: 106 NDLKPIHIQNYVDDLVGI--------------LSPQTIKIHINILNLALKRAYKLKLVKY 151 Query: 184 KPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWED 242 + ++ + + K + + + L+E+ K L A+ GLR E+ L+W D Sbjct: 152 DIVDCIEVPKNKKFKSEVYDQKDIAKLLETIKNTDLELPINLAIGLGLRISEVLGLSWSD 211 Query: 243 VDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 +D + + + + + PKT+ RT++ + + LK+ + Sbjct: 212 IDFTENTITIEKITARDSGKVILKEPKTDTSKRTISAPKEVMAMLKDYKRK--------- 262 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 Y ++ + + + + +F+ K + + L +++ +K+ ++ + RH Sbjct: 263 --YLQDKLQGKIKDCNLLFLD-----KNENPIAEDVLSKKFSRFLKKHNLKHIRFHDLRH 315 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + L+ A I+ ++GH IY + +M+ E ++ + Sbjct: 316 SHVTLLINAKVPIKVISERVGHSNVNTTLNIYSHTLKEMDQEASEKISESI 366 >UniRef50_C5UVC6 Site-specific recombinase, phage integrase family n=2 Tax=Clostridium RepID=C5UVC6_CLOBO Length = 385 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 87/410 (21%), Positives = 150/410 (36%), Gaps = 53/410 (12%) Query: 14 YIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAK 73 I + + GKR R +G+ K A I+ + N G Sbjct: 15 TISLGYDNTGKRRRVIKQGF----RTKKLAEAFATQILDKKNHGF--------------- 55 Query: 74 MVTTRVIKTFGELCDIWTKIKETELTTN--TMKKTKSQLKTLRIIICESTPISHIRYSDI 131 + T F W + T L + T S++ T I + + I I + Sbjct: 56 VSPTDSDLLFKNFIMKWYDMHTTSLKLSVNTRNDYLSRINTNLIPLLGNYKIKDISIDVV 115 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 N+ N L+ N+K TV Y+ +L S L++A I P +KK Sbjct: 116 QNFYNTLI------------NEKHLKPTTVKKYLDILSSCLKYAQSKDLIYKLPTSYIKK 163 Query: 192 LQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 ++ + K + ++ E N + K + +GLR GEL L W DVDL+ GI+ Sbjct: 164 VKIQKPKIEYWNQEEVNFFLNYIKNTYLYTPIFIDILTGLRIGELCGLRWCDVDLQNGII 223 Query: 251 NVRRNLTILDMFG-----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 V L KT++ R++T+ + ++ LKE +E R+ Sbjct: 224 TVNHQLIHDKRLKVLLLADLKTSSSHRSITIPKILIDYLKELKANRQAT-NTEYVVLDRQ 282 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG-----IRRRNPYHTRHT 360 + + L F +V K+ + A + +++ + + RHT Sbjct: 283 DFKYIPRSLSMNFTKKVAKYKKS--------IDDFKKANEEVPHGYMQLKQISFHGLRHT 334 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A L+ G N ++ ++GH +M Y +D M + +LN Sbjct: 335 HATLLIANGENVKVVSERLGHTDIRMTLNTYTHVLDSMKNNTANLLNNIF 384 >UniRef50_D0L542 Integrase family protein n=3 Tax=Bacteria RepID=D0L542_GORB4 Length = 463 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 79/421 (18%), Positives = 143/421 (33%), Gaps = 64/421 (15%) Query: 7 GVEIRGRYIRIWFMF-----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEY 61 V+ KR +E +G+ ++A + + E+ +G Sbjct: 4 SVKKDAGSWYYVVDLGRDPATNKRRQERKRGF----RTKREAVDALDERLSEVRTG---- 55 Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKET-ELTTNTMKKTKSQLKTLRIIICES 120 +V T + W KE + T++ + + + + + Sbjct: 56 ------------IVAVDQRLTLAQYLASWLTAKEQAGIRATTLRSYRQHVDSYIVPTIGN 103 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDN------PRSNKKGRTVRTVDNYIALLCSLLRF 174 + +R + + + +E+ R N K + T A L S L Sbjct: 104 VRLRDLRATHVEHMLSEIAKPPKKPAKGVAIGKGKRRNPKALSPATQRRVHATLRSALTS 163 Query: 175 AYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHG 233 A + +S ++ + +R K P ++ A ++ K + ++ +GLR G Sbjct: 164 AKRKHLVSFNAAADMELPRASRPKVKPWEASDLGAFLDHATKDRLGAFFETIAMTGLRRG 223 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILD----------------MFGPPKTNAGI-RTVTL 276 E + W DVD EK V V + L +D FGP KT +G R V L Sbjct: 224 EALGIRWPDVDFEKARVTVNQQLVEVDGTGIDCPFCGGEHKQFRFGPCKTASGEARIVDL 283 Query: 277 LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL 336 L L Q R+ Y VF + + + Sbjct: 284 DSGTLGVLMAQRLRQEQEREQWGDAY---------NDHQLVFA-----REDGSPIPPADV 329 Query: 337 GARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID 396 A+++A AG+RR + RH A +L AG A ++ ++GH + + + Y +D Sbjct: 330 TAKFHALTDEAGLRRIRLHDLRHGQASLMLAAGVPIAVVSKRLGHSSISITSDTYSHLLD 389 Query: 397 D 397 Sbjct: 390 G 390 >UniRef50_Q82ZU2 Site-specific recombinase, phage integrase family n=2 Tax=Enterococcus faecalis RepID=Q82ZU2_ENTFA Length = 381 Score = 294 bits (753), Expect = 5e-78, Method: Composition-based stats. Identities = 58/397 (14%), Positives = 128/397 (32%), Gaps = 57/397 (14%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK +G+ K+A A I+ +I + + T Sbjct: 29 GKNVYRKRQGF----KTKKQAQIALAEILKDIEENGLD---------------NKPSVLT 69 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F +L + W + + +++ K + + + I + N+ + Sbjct: 70 FKQLYEKWLAQQRLTIKPSSIAVNKRFAEKHILPYLGDCKLDEITVIQCQDLVNKWFNQG 129 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD-- 200 Y L ++R+ ++T P + + Sbjct: 130 HKQYSF---------------YRKLTAQIMRYGESMELMNTNPMRKTILPKWKEEETKLE 174 Query: 201 PLSKTEFNALMESEKG----QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL 256 +K E N + K + ++ ++G R E+ AL W+D+D+ V + + + Sbjct: 175 YYTKQELNHFFDCLKQYGNFKQLAFFRLLAFTGCRKSEVLALQWKDLDITNKSVYIGKTV 234 Query: 257 TILDMF----GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 + + PKT + R+++L L+ + + + G Sbjct: 235 AQDEFYNILTQTPKTASSTRSISLDNETLQIMAKWRTIQRSDYFQM--------GFNTSS 286 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 + ++F S + + N +K+ + P+H RHT A LL +G Sbjct: 287 EEQYIFTN-----NHNKLLSPNVVNIWLNCLIKKYDLPSITPHHFRHTHASLLLQSGVPI 341 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 +A ++GH + + IY + + ++ Sbjct: 342 KEVAERLGHTSTAITDRIYSHVMPEEKEKTADKFAQF 378 >UniRef50_A0JQA1 Phage integrase n=2 Tax=Lactobacillales RepID=A0JQA1_LACS1 Length = 381 Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats. Identities = 66/404 (16%), Positives = 135/404 (33%), Gaps = 60/404 (14%) Query: 20 MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRV 79 GKR +T G+ K+A I +I++ F Sbjct: 25 TVTGKRKYKTKGGFY----TKKEAKLAADEIEKKISNPTF----------------LDNE 64 Query: 80 IKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELL 139 TFGE+ D W + + ++ + Q K+ + I + I+ I + + N Sbjct: 65 NITFGEVYDRWIVNYKLTVKESSFYTVELQYKSKILPILGNKKINQITTIECQDLINYWY 124 Query: 140 HGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI-- 197 + L+ + ++A Q ++ P V + +R Sbjct: 125 SIPL---------------KNYKAIFNLITRIFKYAKQLKIVTDDPTSSVIIPKASRQFN 169 Query: 198 ----KPDPLSKTEFNALMESEKGQ----SQNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 + ++ E +E + L++ +SG+R E AL W D+D EK Sbjct: 170 NLEHSRNYYTRDELKTFLEYAEKHEKHKIYVLFRLLAFSGMRKSEALALTWNDIDFEKAQ 229 Query: 250 VNVRRNLTILDMFG--PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG 307 + + + + ++ PKT + RTV + + + L+E G Sbjct: 230 ITINKTIILVSKVKVTTPKTKSSNRTVFIDKKTVSILREWRLSQKKELLQ--------KG 281 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLT 367 VF K Y +++ N + + + + RHT+A Sbjct: 282 FNALSPNQLVFPD-----KNNHYIIPTTISKMMNRVSEGSNLHHITVHGLRHTYATLAAQ 336 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 G + + +Q+GH ++ ++Y D+ + + ++ Sbjct: 337 GGMSVKQLQAQLGHSKVEITLDVYTSITDEQRKDTANQYTSFVN 380 >UniRef50_C7GF85 Phage integrase n=2 Tax=Clostridiales RepID=C7GF85_9FIRM Length = 398 Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats. Identities = 72/416 (17%), Positives = 136/416 (32%), Gaps = 56/416 (13%) Query: 9 EIRGRYIRIWFM-FRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 + + F G R K +A A +E Sbjct: 16 QRKDGLYFARFYAKNGARQNGYFKTLP-------EAKKWLADAKYEDTH----------- 57 Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 ++ T T + + W +L NT++ + + + + + I+ ++ Sbjct: 58 -----NLIVTAPDMTVDKWFNYWIDNIICDLAPNTIRNYRERYEKNIQPLIGTMCIADVK 112 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 N + T+ + ++ + A + I+ P Sbjct: 113 PMHCKAVLNRMETE--------------YAGSTIRQTYISMGTMFKSAVMNDIIAKHPMN 158 Query: 188 GVKKLQRNR--IKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAWEDVD 244 GV+ + R L+ E +E+ + + + + +GLR EL L W+ +D Sbjct: 159 GVRYTKPVRAVDDIKYLTVEEQEKFLEAAERSHNYRQYALLLETGLRTAELIGLTWDAID 218 Query: 245 LEKGIVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 +K + V ++L GPPKT RT+ L + A LK Y ++SE+ Sbjct: 219 WKKRTLTVNKSLEYRHSRRYWRAGPPKTKKSYRTIPLTERAYTILKSCYDEKDTRKESEM 278 Query: 300 TFYHREYGRTEKQKL------HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 EY + + VF+ N + SS AGI+R Sbjct: 279 LSQILEYTDSRTGEKKCLVMRDLVFI----NWRTGEPAKNSSYDTHLYKLCDEAGIKRFC 334 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + RHT+A + G P + +GH + + + Y D+ + + A Sbjct: 335 MHALRHTYATRAIERGVQPKVLQQLLGHASIKTTMDRYVHVTDESLAKAVQQFEAA 390 >UniRef50_C7TH34 Phage-related integrase n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TH34_LACRL Length = 383 Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats. Identities = 73/402 (18%), Positives = 133/402 (33%), Gaps = 61/402 (15%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK+ R +G+ K+A + + ++G +T T Sbjct: 29 GKKRRIHKRGFRD----KKEAALAASRFTLDADAGSL----------------STNRSMT 68 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F + W + + +T ++T Q+K + + + PI+ I + + N+ Sbjct: 69 FKAVYLEWDAAYKNTVRESTYERTYIQIKKHVLPLFGNKPINKITTAQLQQAVNQWSKQV 128 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIK---- 198 T ++ +LRFA + G+I+ P + V + Sbjct: 129 TRNY---------------RRWLTTASRILRFALRRGYINKNPADLVIIPKEKEQIGDVA 173 Query: 199 PDPLSKTEFNALMESEK----GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 + K E Q L++ + GLR GE AL W+D+ + V + Sbjct: 174 ANFWDKQELTRFFSYIDAKQEPQKTALFRILAFGGLRRGECLALTWKDISFTDSTITVNK 233 Query: 255 NLTI----LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 L+ + PPKT RT+T+ + ALK + + G Sbjct: 234 TLSQGMNGRQLVQPPKTRKSRRTITMDSKTMSALKHWRLVQLQKYMAL--------GFNA 285 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR-RNPYHTRHTFACWLLTAG 369 + VF + + + I + RH+ A L +AG Sbjct: 286 NKPDQLVFSNSK-----NKHLLLHKPADWLKSIEDTHKIEHRITIHGFRHSHASALFSAG 340 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 A + ++GH + IY + N E + L A L+ Sbjct: 341 ATVKEVQERLGHSDVKTTLNIYTHVTKNQNKEAVNKLVAYLN 382 >UniRef50_Q65KT3 Lambda integrase-like protein(Phage related) n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KT3_BACLD Length = 379 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 61/393 (15%), Positives = 123/393 (31%), Gaps = 51/393 (12%) Query: 32 GWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWT 91 G + N K E + E+ + ++ R TF ++ W Sbjct: 22 GIDPKTGNRKTTTRRGFKTKKEAVAAAAEFQKEIDNNALA------RNDITFEDVFKEWW 75 Query: 92 KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRS 151 + + +T + S K + I I + N + Sbjct: 76 DVHSKTIKRSTRYRKLSNFKKHILPHFGKLKIKDITRAYCQKVINLIAQDID-------- 127 Query: 152 NKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR-------IKPDPLSK 204 +V N + ++A + +I+ P E V ++ K + K Sbjct: 128 --------SVQNVKIQANLVFKYALRMEYITKNPMEFVVIPKKEENFLSQEEEKRNFWEK 179 Query: 205 TEFNALMESEK----GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 E +E Q ++ +++G+R GEL AL W+DVDL++ +N+++ + + Sbjct: 180 DEIKTFLEKAHSQLAPQDYVMFYVLIFTGMRKGELIALEWKDVDLKEKTINIKQTMFFEN 239 Query: 261 ---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFV 317 + K R +T+ + LK+ S +Y Sbjct: 240 GKEVIQTTKKYHSKRIITIDDQTAQILKKWRTQQKEMLLSNGITSEAKYVLIRGD----- 294 Query: 318 FMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIAS 377 ++ N + + + R + RH+ A L AGA+ + + Sbjct: 295 ----------MRPLRLAYPNDLLNRMITKNKLHRITIHGFRHSHASILFEAGASIKEVQA 344 Query: 378 QMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 ++GH+ Q IY + + Sbjct: 345 RLGHKEIQTTMNIYTHVTKTAKAKTAETFKKYM 377 >UniRef50_A7B6B9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7B6B9_RUMGN Length = 387 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 72/428 (16%), Positives = 143/428 (33%), Gaps = 74/428 (17%) Query: 9 EIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQS 68 + + R F ++G+ N+++KK + +E+ G Sbjct: 2 QRKSGIYRGRFYYKGETY-------TKDNADLKKLVQEMEDLRYEVKHG----------- 43 Query: 69 STGAKMVTTRVIKTFGELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 + T DIW K+ + +T + + ++ Sbjct: 44 -----LKGKGDNITLDTWFDIWLNTHKKRTIKESTQVRYDDFYRRYIKKQIGKQRVADFN 98 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 + + + + +T+ + +L ++ ++A + ++ P Sbjct: 99 PIILERLLQNMADDD-------------YSTKTIRDVYNILNAMFKYAVHNRILTFNPCA 145 Query: 188 GVKKLQRNRIKPDPLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDLE 246 GV+ + + L+ E ++E K + +NL + A+ +G+R GEL L W+DVD Sbjct: 146 GVEVPKTKTKQIRVLTVKEQREVLEHAKERIHENLIQVALGTGMRGGELLGLTWDDVDFR 205 Query: 247 KGIVNVRRNLTILD---------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 K ++V + L + + PKT IRT+ + +ALK Q+ + S Sbjct: 206 KREISVNKTLVYIKDKETKKYVFKYQTPKTKNSIRTIPMQDSVYKALKRQWIQLKEMQLS 265 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG--------- 348 + E F V GK + + + K Sbjct: 266 ASEWQPLEG-----------FENLVFVGKNGKPITEHTFQVTLDWIEKSINKERKKQAEK 314 Query: 349 -------IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDE 401 I P+ RHTFA AG + + +GH + + ++Y DD Sbjct: 315 NKTVFIPIPHFYPHALRHTFATRCFEAGIDAKVVQGFLGHYSIAITLDLYTHVTDDKAKS 374 Query: 402 QIAMLNAR 409 ++ L Sbjct: 375 EMDKLQNL 382 >UniRef50_B2TP23 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=3 Tax=Clostridiales RepID=B2TP23_CLOBB Length = 398 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 77/423 (18%), Positives = 152/423 (35%), Gaps = 53/423 (12%) Query: 7 GVEIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 RG + F GKR + + G+ K+A + +G Sbjct: 5 NTRKRGDKWQYQFEAATIDGKRKQISKSGF----RTKKEA----------LEAGTKALAE 50 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 + +F + D W K + L T+ ++K Sbjct: 51 Y-----NNCGLTFVPSEISFNDYLDYWIKEYAQVNLKETTVDNYNKKIKLYIKPKLGIYK 105 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ-SGFI 181 + + + + ++ NE + +G + T+ +L L +A + G+I Sbjct: 106 LKSLTPAILQSFINEKFN-------------EGFSRNTLLVLKGILSGSLNYAVEPLGYI 152 Query: 182 STKPFEGVKKL--------QRNRIKPDPLSKTEFNALMESEK-GQSQNL-WKFAVYSGLR 231 P V+ + + +S+ + + E G S L + A GLR Sbjct: 153 KFSPMAAVRLPLKRAVPNTPTRKKEKYIVSEEQMEGIFERFPFGHSSYLPLQLAYRCGLR 212 Query: 232 HGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQY 288 GE A+ W+DVDL+ +++ + + + F PPK + R + L ++ LK+ Sbjct: 213 LGEAFAITWDDVDLKNQKLDINKQVQYKNKQWYFTPPKYD-SYRIIDLDNTIIDILKKYK 271 Query: 289 KLTGHHRKSEITFYHREYGRTEKQ--KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKR 346 + + Y +KQ + + + + Y + ++ + Sbjct: 272 QQQRKDKIYYGELYTELKINDKKQIKETDGTEIHLINIRENGTYIQPRVMQHCFHIIHHK 331 Query: 347 AGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 GI+ + + RHT A LL++GAN + ++GH+ M ++Y D+M I +L Sbjct: 332 LGIKELDYHSLRHTHATMLLSSGANIKAVQERLGHKKLDMTLDVYTHVTDEMRRNTIDIL 391 Query: 407 NAR 409 N + Sbjct: 392 NKK 394 >UniRef50_C0BF20 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BF20_9FIRM Length = 373 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 73/421 (17%), Positives = 154/421 (36%), Gaps = 69/421 (16%) Query: 3 KLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 KLP G+ RG FM++G + + S I K + +++ G + Sbjct: 9 KLPKGIRQRGNTFEGRFMYKGV-------SYTVQASTITKTQKEMTDLKYKLEHGLYV-- 59 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIIICEST 121 + T E + W + + + T + K+ + Sbjct: 60 --------------KKEKITLMEWYETWLEEYKKNRVKIGTYTSYEKYYKSTINNRLGNK 105 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 +S IR I N+++ K+G + ++ A+L L+ A ++G I Sbjct: 106 ELSEIRGEHIQKLYNDMV-------------KEGYAISSIKIVSAILNGCLQQAMKNGLI 152 Query: 182 STKPFEGVKKLQRN--RIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAAL 238 P + + ++ + + ++K + + M+ + + + + +G+R GE+ L Sbjct: 153 ERNPVKLAELPRQTGTKKERTAMTKEQQDLFMKYAEESYLYHFFSVMLRTGMRKGEMQGL 212 Query: 239 AWEDVDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 + D+D ++ +++VRR L ++ G PKT R + L E ++ Q K Sbjct: 213 KYSDIDKKQNVIHVRRTLKYIEGKGYFEDTPKTRTSTRDIPLTAAITEHIEAQRKY---- 268 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG-----I 349 +G + ++F + S + + +KR Sbjct: 269 -----------WGFKVVRMDQYLFCN-----ENGDPISRERIQGEIDRIIKRIKSDGYDF 312 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 R + RHTFA + AG P + + +GH + M ++Y + D +++ + Sbjct: 313 PRITSHVFRHTFATRAIEAGMPPQVLKTILGHSSLAMTMDLYSHVLPDTKADEMQKIANV 372 Query: 410 L 410 Sbjct: 373 F 373 >UniRef50_C4LFZ6 Integrase family protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFZ6_TOLAT Length = 394 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 94/414 (22%), Positives = 167/414 (40%), Gaps = 38/414 (9%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 T V ++ + + F F+G+RCRE G T N +K + +I G+F + + F Sbjct: 2 TSVFVQNDILYLDFHFKGQRCRERT-GLPDTEFNRRKLEKFCKRMDAQITLGQFNFCKTF 60 Query: 66 PQSSTGAKMVT--------TRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 P SS +F E + W + K+ E T+ + ++ L + Sbjct: 61 PNSSQCEYFHKIAHREELLKAGCPSFAEFAETWYQEKQVEWRTSQRETIRNILDIHLLPS 120 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 P++HI ++IL++RN K + V++ + L +L A Sbjct: 121 FGLMPVNHIGKTEILSFRN-------YVTQLKGRGDKQISASRVNHIMTPLRMILNEA-S 172 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAA 237 F ++ +K ++ R PL+ E L+ + + + ++GLR E+ Sbjct: 173 DRFDFPAVWKQIKSMKVPRSDVMPLTLAEIERLLLVVRKDFKPYYTVRFFTGLRSSEIHG 232 Query: 238 LAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 L W VD E+ + V + ++ KT+ R V + EAL QYK++G +R Sbjct: 233 LTWRHVDFERCQILVYQAYVRGELI-STKTDGSYREVQMSLRVYEALLAQYKMSGQNRSI 291 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 + FVF V + W + G+ +R PY + Sbjct: 292 D----------------DFVFCSSVGTA----LEDRNVANRVWYPLLALLGLEKRKPYQS 331 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A L++G +P +IA Q+GH + M++ +Y ++ +M LS Sbjct: 332 RHTTATLWLSSGESPEWIARQLGHVSTNMLFRVYSRYVPNMTGRDGTAFEQMLS 385 >UniRef50_C9A167 Integrase n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A167_ENTGA Length = 377 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 72/391 (18%), Positives = 138/391 (35%), Gaps = 63/391 (16%) Query: 34 EITNSNIKKAGN-LRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTK 92 + T I+ R + + E + ++I T+ ++ ++W + Sbjct: 32 QDTKKPIRTTRRGFRTQREARLAIADLEL------NGLSKPESEPQMIHTYEQIYNLWYE 85 Query: 93 IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSN 152 +T + +T+ KT+ K + + PI I+ D N N + Sbjct: 86 EYKTTVKASTLLKTERVFKNHILPAFGNKPIQDIKPMDAQNQMN-------------IWH 132 Query: 153 KKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR-----IKPDPLSKTEF 207 KK V NY L + +A + I+ P + +KK R + K E Sbjct: 133 KKLVRASMVMNYAGL---IFDYAIRMQLINMNPTKVIKKPVRKESVREDKDMNFYDKDEL 189 Query: 208 NALMESEKG----QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD--- 260 M + + ++ ++ ++G+R GE AL W D+DLEK + + + ++ Sbjct: 190 KKFMAALENNNNFRAFVYFRLLAFTGMRKGESLALKWSDIDLEKQTLYINKAVSRSATGL 249 Query: 261 MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMP 320 PKT + IR +++ + L+E K VF Sbjct: 250 YIQTPKTPSSIRRISIDDKTVSILQEYKKE---------------------SPDGLVFQS 288 Query: 321 RVCNGKQKPYYSVSSLGARWNAAVKRA--GIRRRNPYHTRHTFACWLLTAGANPAFIASQ 378 + S + + A+K ++ + + RHT A L AGA+ + S+ Sbjct: 289 -----EDGGILSPAKPRKWYLTAMKNLPDDFKQISIHGFRHTHASLLFEAGASIKDVQSR 343 Query: 379 MGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 +GH Q ++Y ++ N Sbjct: 344 LGHSDIQTTMDVYTHVSKTAKEQLANRFNNY 374 >UniRef50_C8NHZ6 Phage integrase family site-specific recombinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHZ6_9LACT Length = 393 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 67/408 (16%), Positives = 126/408 (30%), Gaps = 51/408 (12%) Query: 12 GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTG 71 I+ + G+ + + KK R + + + + Sbjct: 7 DDRIKPYKKKNGQVYYQFKIYYGTNPKTGKKQYTTRRGFESVLAATT---ALQRLEVELM 63 Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 + + T+ EL + W + + +T + T + K + I I D Sbjct: 64 DTGLVVKQKFTYRELYNEWLVTYQKRVRPSTFQATVTYFKKHILPAFGDYYIDTITIQDC 123 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 N ++ +Y + ++A + I P V Sbjct: 124 QAQVNRWYSNY---------------PKSTQSYKIYAQMIFKYAQKLNLIEKNPMSLVDL 168 Query: 192 LQR---NRIKPDPLSKTEFNALMESEKG--QSQNLWKFAVYSGLRHGELAALAWEDVDLE 246 + K + +E + + + Y+GLR GE AL W D+D Sbjct: 169 PKSGDFKDDKLKYYDRETLIRFLEYIEPFKEVYTFFYLLSYTGLRCGEAFALTWNDIDFR 228 Query: 247 KGIVNVRRNLTI---LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 ++V + + KT G+RT+ + + E +L+G+ Sbjct: 229 NHSISVNKTVARSMEDKYISQTKTKNGMRTIRINGSLERLISEWKELSGNE--------- 279 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 +VF R +YS ++ N ++ R P+ RHT A Sbjct: 280 -----------TYVFQNR-----NNSFYSSNTAVYWLNQILEGTNFPRITPHGFRHTHAS 323 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 L AGA+ I ++GH Q IY ++ D + +S Sbjct: 324 LLAEAGADLKDIQDRLGHGDIQTTANIYTHVTNNKKDNTNDKFDKLMS 371 >UniRef50_C7WMG1 Integrase n=9 Tax=Enterococcus RepID=C7WMG1_ENTFA Length = 382 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 63/401 (15%), Positives = 133/401 (33%), Gaps = 55/401 (13%) Query: 28 ETLKGWEITNSNIKKAGN--LRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGE 85 +T G + K R +I E + + + TF E Sbjct: 17 KTYLGTDPLTGKKKYTTKRGFRTQKEAKIALARLEMEIQ-------KNGIPSSTNITFQE 69 Query: 86 LCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLY 145 + +W + + + ++ +T+ + + IS I + N + Sbjct: 70 VAFMWLENYKNTVKESSYSRTEIIFRKHILPSFGKIEISKISTAYCQKIVNTWHSKGSSK 129 Query: 146 LDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN-----RIKPD 200 +I + + +FA G + P V + K Sbjct: 130 QYPL--------------FINYMNQVFKFAINIGVTNQNPVINVIVPKNQDIITSEKKIK 175 Query: 201 PLSKTEFNALMESEKG--------QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 +K + ++S + + L++ +SG R GEL AL W+D++++ G + + Sbjct: 176 FYTKDQLQIFLKSIEQSESAYITIRDYTLFRLLAFSGCRIGELLALTWDDLNIKTGELQI 235 Query: 253 RRNLTILDMF---GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 + + D + PKT RT+ L + LK+ + Sbjct: 236 NKTIAKSDHYYVSNTPKTKKSNRTLILDAKTITILKKWKLEQKKYLLKLG---------- 285 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 + R+ ++ + ++ R+N K+A + + RHT A L AG Sbjct: 286 ------YTQPSRIFTNEENEFTINQAITDRYNIYRKKANLPNIGLHGFRHTHASLLYYAG 339 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A+ + ++GH + + Y +D ++ L+ + Sbjct: 340 ADHKEVQERLGHANIKTTLDTYTHLTNDGKEKTTEKLSKYI 380 >UniRef50_B4V6V4 Phage integrase n=6 Tax=Streptomyces RepID=B4V6V4_9ACTO Length = 426 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 80/404 (19%), Positives = 130/404 (32%), Gaps = 52/404 (12%) Query: 25 RCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFG 84 R R + G K A + N G + T Sbjct: 43 RKRIRVYGT-----TRKDAMTKLTEKIAASNRG----------------LPVAAADSTVS 81 Query: 85 ELCDIWTK-IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGET 143 W + L NT + + ++ ++ + D+ + + L Sbjct: 82 AYLAYWLDGVAVHHLRENTHTRYAASIRLHLNPGLGVKKLARLTTRDVRTFLDGLRTTCQ 141 Query: 144 LYLDNPRS-----------NKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL 192 N S K + TV A+L S L A + + VK Sbjct: 142 CCAQNRDSVRRSCCAIGQCCGKRLSPLTVTYVHAVLKSALEHAVREDELPRNVARNVKTT 201 Query: 193 QRNRIKPDPLSKTEFNALMESEKGQSQN-LWKFAVYSGLRHGELAALAWEDVDLEKGIVN 251 + PL+ E L+ + G N L++ A+ +GLR GEL L WED+DL+ G Sbjct: 202 TPRPRRFQPLTAAEARQLLHAANGDRLNALYELALRTGLRKGELLGLHWEDLDLDGGTAT 261 Query: 252 VRRNLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG 307 + R+L G KT A R + L L +LK + R++ T + Sbjct: 262 IHRSLQRTRSQGLTVLNTKTLASDRRIALPTECLNSLKTHQERQQEERQTAGTSWT---- 317 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLT 367 VF ++L R+ + A +R + RH+ A LL Sbjct: 318 -----DNGLVFTT-----PNGQPLDPTNLTRRFRRLLHGAELRTIRFHDLRHSTATLLLE 367 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 G + I +GH + +Y + + I L + LS Sbjct: 368 QGVDLVVIKELLGHAHIGVTAGVYAHVRLRLQHQAIDTLGSILS 411 >UniRef50_A0QET6 TraSA:integrase fusion protein n=1 Tax=Mycobacterium avium 104 RepID=A0QET6_MYCA1 Length = 382 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 73/408 (17%), Positives = 140/408 (34%), Gaps = 69/408 (16%) Query: 10 IRGRYIRIWFMFRGKRCRETLKGWEITNSNIKK-AGNLRALIVHEINSGEFEYLRRFPQS 68 GR +R + + RE + + K A + + +G++ Sbjct: 22 RHGRGMRWRATYVDDQSREHSRSF-----GRKVDAQRWLDEVTAAVVTGQYV-------- 68 Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKETEL-TTNTMKKTKSQLKTLRIIICESTPISHIR 127 TF + + W ++ ++ ++ ++ L+ ++ I Sbjct: 69 ------DPKAGQITFRDYAERW---RKMQVQRPSSRAHIETMLRRHAYPTLGDRQLTSIL 119 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 SD+ + L TV L+ ++++ A + ++ P + Sbjct: 120 PSDVQAWVKGLQ----------------LAPATVGVVHGLVSTVMKSAIRDRRLAANPCD 163 Query: 188 GVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEK 247 G K + R + PL+ + A+ + Q L A +GLR GE L + V + Sbjct: 164 GTKLPKVQRPQIVPLTTEQVEAVRAELPAELQALVTLAAGTGLRQGECFGLTVDRVRFLE 223 Query: 248 GIVNVRRNLTILDM----FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 ++ V R L + FGPPKT A R + L + Sbjct: 224 RVLTVDRQLVTVAGQAPTFGPPKTRASNRAIPLPKVV------------------ADALA 265 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN-PYHTRHTFA 362 + VF +Q + S+ G RW AAVK A + + RH +A Sbjct: 266 AHLAAFPAEPDGLVFT------QQGKPITRSTFGYRWRAAVKEAKLPHGTGFHALRHYYA 319 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 L+ G + + +++GH +A + Y D +D +++ L Sbjct: 320 SLLIRHGESVKTVQARLGHASAVETLDTYSHLWPDSDDRTRDAIDSVL 367 >UniRef50_Q252J3 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q252J3_DESHY Length = 395 Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats. Identities = 70/404 (17%), Positives = 141/404 (34%), Gaps = 40/404 (9%) Query: 22 RGKRCRETL-KGWEITNSNIKKAGNLRALIV---HEINSGEFEYLRRFPQSSTGAKMVTT 77 GKR + + G + ++ +KA I + + Sbjct: 2 DGKRKPKWVSTGLPVAGTSDRKAQKAFDQIRLEYEQEQEEKERREAEERAREQIEGKRNP 61 Query: 78 RVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE--STPISHIRYSDILNYR 135 + F + W + + T K ++ L + + + I ++ Sbjct: 62 QADVLFTDYLQKWLTQAKPTIAKTTFKGYQTMLDGRISRYFTELNITLGEVTPQHIQDFH 121 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 + +G T TV +Y A+L L+ A + I + P + V + ++N Sbjct: 122 QSIFD-------------EGHTPNTVIHYHAVLRRALQNAVKKEIIDSNPADRVDRPKKN 168 Query: 196 RIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 S E AL + + K A Y GLR E+ L W+ ++LE+ ++++ Sbjct: 169 VYHAQFYSAEEMMALFDEISDDPLEICVKLAAYYGLRRSEVLGLKWDAINLEQKTISIKH 228 Query: 255 NLTILDMFGP--------PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 + + G KT + RT+ LL + L + + +RK Y R+Y Sbjct: 229 KVIEDTVDGKSIAVGEDVLKTKSSFRTLPLLPSVEKLLLAEKEKQEMYRKLFKRSYCRDY 288 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 + +C + + + ++ A+++A +++ + RH+ A LL Sbjct: 289 ------------LDYICLDQAGKLMRPNYVTEHFSWALEKADLKKIRFHDLRHSCASLLL 336 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 G + I +GH T +IY E +++ Sbjct: 337 ANGISMKQIQIWLGHSTFSTTADIYSHLDFHAQIESGLVMDGMF 380 >UniRef50_Q88UJ5 Prophage Lp3 protein 1, integrase n=1 Tax=Lactobacillus plantarum RepID=Q88UJ5_LACPL Length = 385 Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats. Identities = 66/422 (15%), Positives = 129/422 (30%), Gaps = 68/422 (16%) Query: 11 RGRYIRIWFMF-------RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + R F GK+ +G+ K+A + + + +I Sbjct: 10 KDGNTRYQFQVYLGVDPLTGKKKNTRRRGF----KTKKEAQIVLSRLELDI--------- 56 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI 123 + T F ++ +W + + +T T+ + + I I Sbjct: 57 ------YNHGLPTKNDNTIFKDIYQLWFTQYKQTVKESTWVTTQRLFRLHILPIFSDYRI 110 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 + I D N+ + + + +L +A IS Sbjct: 111 AKISIKDCQKAINQWFNAGLAKY---------------HTLMNYVAKVLDYAINIDLISE 155 Query: 184 KPFEGVKKL--QRNRIKPD---PLSKTEFNALMESEKGQSQN-----LWKFAVYSGLRHG 233 P + V + +R + + K E E ++ A ++G+R Sbjct: 156 NPAKRVIVPVNKNDRSRKNLENYFDKAELQHFFECLTDDDNTPQASVFFRLAAFTGMRKS 215 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILDM----FGPPKTNAGIRTVTLLQPALEALKEQYK 289 E+ L W D+D + V + + D PKT RTV L ++ L+ Sbjct: 216 EMLCLEWSDIDFSNHTIRVNKTQSRGDGARLLVQAPKTARSNRTVYLDPTTIKILQHWQV 275 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 + +G Q H+VF + + S + + + Sbjct: 276 DQKK--------WLLRFGFNINQGNHYVFAN-----ENNEMFQPSKPRKWLEHTLTKYDL 322 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + + RHT+A A A+ + Q+GH + + +IY +E L Sbjct: 323 KHVTVHAFRHTYATLAFEAHASIKSVQDQLGHSSYRTTLDIYTAVTAKQKNEATEKLANY 382 Query: 410 LS 411 L+ Sbjct: 383 LN 384 >UniRef50_UPI0001BCC5A1 phage integrase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCC5A1 Length = 416 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 78/418 (18%), Positives = 144/418 (34%), Gaps = 70/418 (16%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 M ++ + R +R K RE K + +A ++ GE+ Sbjct: 1 MGRMASATRR--GPGRWLGRYRDKAGRERTKTFPTKG----EARTWADEQERKVRRGEWV 54 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 T E + W + TM+ +S L+ + + Sbjct: 55 --------------DPEMSRITVSEWAETWLAT--LVVKPKTMESYESLLRCHVLPRWGA 98 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 + + +D+ + + + N + + +L +L A + G Sbjct: 99 VRLESVALADVKAWVAGM----------RQQNGRPLSASRTKQAYQVLTMMLDLAVEDGR 148 Query: 181 ISTK---PFEGVKK---LQRNRIK-PDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHG 233 ++ P G + R + L+ + AL + G + L Y+GLR G Sbjct: 149 LARNSAKPASGRSRSMVPPVQRDRAKKYLTPRQLEALAGAA-GDGRVLILTLGYTGLRWG 207 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKL 290 E +AL DVDL ++VRR+++ + +FG K++A RTV + + L+ Sbjct: 208 EASALRVSDVDLLGRRIHVRRSISEVRGSLVFGTTKSHA-TRTVPITKSLAVELEALIDG 266 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKRAGI 349 G + + + + R ++ AV RAG+ Sbjct: 267 RGPD-------------------------DPLFAAPGGGWLHLRNFRRRDFDPAVARAGL 301 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 P+ RHT A ++AGAN + +GH +A M ++Y D+ D L Sbjct: 302 PHITPHGLRHTAASIAVSAGANVKAVQKMLGHASAAMTLDVYADLFDEDMDALAERLE 359 >UniRef50_D2SF19 LigA n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SF19_9ACTO Length = 397 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 78/403 (19%), Positives = 140/403 (34%), Gaps = 65/403 (16%) Query: 1 MSKLPTGVEIRGRYIRIWFMFR--GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGE 58 M+ T + + R +R G R E ++ A + + Sbjct: 1 MAGSITRITLSDGSARYRARYRDPGGRQHERRFVRKVD------AQRWLDEATSALVTQT 54 Query: 59 FEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC 118 + R T + D W +T + +T+ + + L+T + Sbjct: 55 W--------------TAPARGRVTVADWADRWLAS-QTGVKPSTLYRYGNLLRTHVLPTW 99 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 ++ + ++D+ + +LL +G TV + LL A + Sbjct: 100 GKHQLADVTHADVAVWVAKLL-------------GQGSAAGTVRQAHRVFSLLLGLAVRD 146 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAAL 238 G I P E V + R +P L+ E L ++ G ++ + Y+GLR GE+AAL Sbjct: 147 GRIPRNPAERVPLPRVIRSEPRFLTHDEVERLADAA-GAEGDVIRLLAYTGLRFGEMAAL 205 Query: 239 AWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 VD + + + +T + FG PKT+ RTV L E L + + Sbjct: 206 RVRRVDFLRRRLTIAEAVTEVGGRLEFGTPKTHQ-QRTVPLPATLAEPLARRCEGKQGDD 264 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 V + ++ AV+ AG+ P+ Sbjct: 265 L------------------------LVTTASGTVLRLRNWRRVVFDPAVRAAGLSDVTPH 300 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 RHT A +++GA + +GH +A M ++Y +DD Sbjct: 301 DLRHTAASLAVSSGATVKAVQRMLGHASAAMTLDVYSGLVDDD 343 >UniRef50_C1SH59 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH59_9BACT Length = 390 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 93/404 (23%), Positives = 153/404 (37%), Gaps = 53/404 (13%) Query: 8 VEIRGRY--IRIWFMFRGKRCRETLKGWEITNSNI------KKAGNLRALIVHEINSGEF 59 + RG+ + ++F + G R E + T N K + +I+ F Sbjct: 4 IHARGKKNRLYVYFQYLGVRRHEKTPFFCETGKNGCKCRQCKSTAGWLHELECKIDDKTF 63 Query: 60 EYLRRFPQS--STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 +Y FP+S + M + +FG +W ++T + T S + + Sbjct: 64 KYAEYFPESRVAKALPMADSSPQISFGTYAILWLDSQKTVFSHATFITYTSSINN-LLAT 122 Query: 118 CESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ 177 E+ I I+ + I Y + +T+ N++ +L S+L A + Sbjct: 123 FENMSICDIKPAHIRTYI----------------KNSEVSPKTLKNHVGVLSSILSAAVE 166 Query: 178 SGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL---WKFAVYSGLRHGE 234 I P VK + ++ DPLS E ++ K N+ + A ++G+R GE Sbjct: 167 DDLIPKNPCTSVKLPHISSVEVDPLSLEEITMILNWMKSHHPNMLAFFAVAFFTGMRTGE 226 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHH 294 + L W D+D + + R +T + KT RTV +L E L + Sbjct: 227 IMGLQWGDIDFNSHTITISRTITAGKLKHRTKTADS-RTVDILTELDEYLSYHK--QFTY 283 Query: 295 RKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNP 354 KSE F E K + + W +K GI+ R Sbjct: 284 MKSEWLFLTYENKPFNKTD--------------------NIIKTYWKPCLKALGIKYRTL 323 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 Y TRHTFAC +L G N ++ +GH+T M+ YG ID Sbjct: 324 YQTRHTFACLMLDVGENINWLKKMLGHKTLDMILRRYGNRIDKT 367 >UniRef50_C2BD46 Possible phage integrase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BD46_9FIRM Length = 377 Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats. Identities = 60/415 (14%), Positives = 132/415 (31%), Gaps = 59/415 (14%) Query: 11 RGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSST 70 R + + + F L +IT I + + ++ Sbjct: 7 RDKNGELRYKFN-----AYLGTDDITGK----------EIRTNRSGFTSKKQAELAYANL 51 Query: 71 GAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSD 130 + + + TF E+ + W ++ + ++ ++TKS T + + I + Sbjct: 52 RNENLRRKKNPTFKEIGERWLELYSKTVKYSSYQRTKSLFNTHIYPFIGNKLLKSITTAM 111 Query: 131 ILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK 190 + N+ + A + + +A + P V Sbjct: 112 LQELTNKKSKEL----------------ASFSKINAQIKRVFDYAISRDIVDYNPALSVI 155 Query: 191 KL-----QRNRIK-PDPLSKTEFNALMESEKGQ----SQNLWKFAVYSGLRHGELAALAW 240 +R + + K E + + K + Y+G+R EL AL W Sbjct: 156 YPITNVNSVDRYESIEFWEKDELKEFLTACKKDLDFMWFCYFWILSYTGMRKSELQALEW 215 Query: 241 EDVDLEKGIVNVRRNLTI----LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 D+D + +N+ ++L++ KT R +T+ ++ L + + K Sbjct: 216 ADIDFNRRTININKSLSVYKDNKKFISSTKTKNSTRIITIDSITVKLLLDWKQQQSEIYK 275 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 + + + +VF + S ++ R+ +K +R+ + Sbjct: 276 KTVI---------KGKTQKYVFTDKSL-----ELTSHNAPRKRFLRVLKNNNLRKIRLHS 321 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A AG + + ++GH + IY + I+ +S Sbjct: 322 LRHTHASLCFEAGMDIKDVQHRLGHSNIETTLNIYVHISKIKERKSISKFEDFMS 376 >UniRef50_Q88SM0 Prophage Lp4 protein 1, integrase n=1 Tax=Lactobacillus plantarum RepID=Q88SM0_LACPL Length = 388 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 67/403 (16%), Positives = 126/403 (31%), Gaps = 61/403 (15%) Query: 22 RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIK 81 GK R +G+ K+A + + + F Sbjct: 32 NGKAKRMHKRGF----KTKKEAQLWTSNVQTDFTKNGF----------------IANDNI 71 Query: 82 TFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 TF EL W + + ++ +T T + + S + I + + ++ L+ Sbjct: 72 TFAELYTKWFNEDYKEQVKESTYMITDDIFRLHILPELGSQRVKRITVAQCQSIVHKWLN 131 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI--- 197 +T + S+ F + + P ++ Sbjct: 132 QGF---------------KTYRRFRTYAISVFDFGVRMELTTRNPMAKTSIPKQKTKPQA 176 Query: 198 -KPDPLSKTEFNALMESE----KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 D K+E ++ Q+ ++ ++GLR GE AL W D++ E + V Sbjct: 177 PHVDFYEKSELLHFLDCASKHENPQAFMFFRLLAFTGLRRGEALALQWSDINFETNELTV 236 Query: 253 RRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 + + + PKTN RT+ L + L + E G Sbjct: 237 NKTQAVGKRWRTIIQTPKTNTSYRTIVLDPDTAQWLHKWKMTQARQCF--------ELGF 288 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTA 368 VF +Q S S++ + K+ G+R + RHTF A Sbjct: 289 NANDPSQLVFTN-----QQNKLMSPSTVNYFNWSICKKYGLRHIKIHAFRHTFCTLAFEA 343 Query: 369 GANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 A ++ +GH ++ +IY +E + L +S Sbjct: 344 HAGINEVSKTLGHADLKITEQIYLHVTKKQKNETASKLARYMS 386 >UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X726_NAKMY Length = 371 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 72/386 (18%), Positives = 123/386 (31%), Gaps = 44/386 (11%) Query: 29 TLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCD 88 + + T + +A ++ M T Sbjct: 25 YVPVADGTYRRVSHYVRTKADAKAKLRE---------MNDRAAKNMPAPPPSLTVEAYLG 75 Query: 89 IWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDN 148 W + + +T +S + + +S + D+ + L Sbjct: 76 EWLTHMKQHVRRSTWVAYESNARLHIVPRIGRKKLSQLSVRDVRLMIDGL---------- 125 Query: 149 PRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFN 208 K G+ RTV A L + L AY+ ++ + V+ + +PLS E Sbjct: 126 ---RKDGKGKRTVQYVHATLRAALEHAYREELVTRNVAKMVRVERPTPTPKEPLSVAEAR 182 Query: 209 ALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGP 264 L+ + + LW + GLR E+ L W++VDLE ++V ++ +D P Sbjct: 183 RLLTATRDDEDHALWVVMLLLGLRRSEVCGLRWDNVDLENRTLSVTHSVQRVDGKLRELP 242 Query: 265 PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCN 324 KT RTV L +AL + V Sbjct: 243 TKTRRSTRTVPLPAMVHQALVTHRA------------------AMMPTSQYLPEPVYVFG 284 Query: 325 GKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETA 384 K +L RW +R GIRR + RH+ LL G +P + +GH Sbjct: 285 TKIGTPMEPRNLTRRWVTLAERQGIRRVPLHALRHSCVSLLLAQGVHPRTVMEIVGHSAI 344 Query: 385 QMVYEIYGMWIDDMNDEQIAMLNARL 410 +M +YG + + L+ L Sbjct: 345 EMTMNVYGHVNLETQRRALDELDRTL 370 >UniRef50_B5H9T3 TraSA integrase fusion protein n=4 Tax=Streptomyces RepID=B5H9T3_STRPR Length = 372 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 78/412 (18%), Positives = 132/412 (32%), Gaps = 65/412 (15%) Query: 6 TGVEIR-GRYIRIWFM-FRGKRCRETLKGWEITNSNIK-KAGNLRALIVHEINSGEFEYL 62 ++ R R + GK E + ++ K A + + +G++ Sbjct: 2 ANIQKRPNGKWRARYRDLDGK---EHARHFD-----RKIDAQRWIDEVTASLVTGQYV-- 51 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 K F E + W I +T K L+ E Sbjct: 52 ------------DPRSAKKPFKEYAEEWRAI--QPHRPSTAKAVAQHLRCYVYPAWEKRS 97 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + I+ D+ ++ L G T + ++ R A + I Sbjct: 98 LGAIKPGDVQSWVTSLTTTH------------GLAASTSRTVFNTVNAVFRAAVRDRMIP 145 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWED 242 P K R K PL+ + L + + + L +GLR GEL L Sbjct: 146 HNPCAEAKLPSVPRKKIVPLAVEQVRTLSDEIPARYKGLVLLGAATGLRPGELFGLQLRH 205 Query: 243 VDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 VDL V+V + + G PPKT RTV L + A++A+K + Sbjct: 206 VDLLHATVSVEQQIQQTAKHGVYVCPPKTARSHRTVPLPRMAVDAMKAHLRDF------- 258 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN-PYHT 357 ++F + P + W A +AGI + P+ Sbjct: 259 ----------PADGPEGWIFT----APQGGPVVYTHFMDGSWRPACAKAGIPKGTGPHAL 304 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 RH +A L+ G + ++ ++GH A M IY D + A ++ Sbjct: 305 RHHYASLLIRHGESVKTVSERLGHTNAAMTLNIYTHLWPDSEERTRAAVDKA 356 >UniRef50_D2BLD3 Phage integrase n=4 Tax=root RepID=D2BLD3_LACLK Length = 399 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 80/414 (19%), Positives = 142/414 (34%), Gaps = 42/414 (10%) Query: 13 RYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQS-STG 71 + + ++ RG + +T IK I +G L R Sbjct: 12 KSGEVRYILRG----AYIGTDVLTGKQIK------TDIRGRTKTGVKNELERLKNEFKKN 61 Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 ++TFGE+ + + ++ + + ++++ +S L T I + IS I + I Sbjct: 62 GNTKGKESLETFGEVAESFFELYKLQQKVGSIRQMRSNLDTYAIPAFGNKRISKITTAHI 121 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 E L + G + + + ++ + + A G I P V Sbjct: 122 QKQVIEWAKNAAEPLGGKQKRDVG-SGKDYKLQLNVINRIFQHALSLGIIDRNPCHSVII 180 Query: 192 LQRN----RIKPDPLSKTEFNALMESEKG---------QSQNLWKFAVYSGLRHGELAAL 238 + + +KTE + L + L + V SGLR GE AL Sbjct: 181 PKVKIDKPNKEVKFYTKTELSELFSHIESLDNTKWSTQYFNALIRLLVASGLRIGEAMAL 240 Query: 239 AWEDVDLEKGIVNVRRN-LTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 W DVDL+ V+V + + + PKTN R +++ A+ LK Y H S Sbjct: 241 EWFDVDLDNQTVSVSKTTVQRTVIQDTPKTNKSNRVISIDSKAVSTLKRWYFFQKKHFMS 300 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 + VF Q L R A + + + Sbjct: 301 LGNPHQ-----------SLVFPT-----WQGNVMDYHGLNYRLKKIEDAAKLTSLSFHGF 344 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RH+ A L AG I ++GH T QM ++Y + ++++ + + Sbjct: 345 RHSHASLCLNAGMTYKVIQERLGHSTLQMTMDLYSHLEPEKKNKELELFTKYAN 398 >UniRef50_A3DCS0 Phage integrase n=6 Tax=Bacteria RepID=A3DCS0_CLOTH Length = 506 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 69/395 (17%), Positives = 139/395 (35%), Gaps = 38/395 (9%) Query: 29 TLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF----PQSSTGAKMVTTRVIKTFG 84 TL+ + A L +HEI + Y + G T V F Sbjct: 117 TLEAYYNHEKTKNHASKKTILQIHEIITLSLNYAIELGWIESNPAKGINPATDEVSVLFV 176 Query: 85 ELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETL 144 + W ++ T + T S ++ I + +DI + + L Sbjct: 177 DFLLEWLEMMRTRVRETTYASYNSGIRQSIIPYFMDKKL---TLTDIEE------NPKYL 227 Query: 145 YLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSK 204 KG + +V A + L+ A+ G I + P + +++ ++ + Sbjct: 228 QDFYQHELSKGLSPNSVLRRHANIRKALQHAFHLGLIKSNPADRIERPKKQDYTASYYTD 287 Query: 205 TEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDL--EKGIVNVRRNLTILD- 260 E L ++ KG L A Y GLR E+ L W+ +D + + ++ +T ++ Sbjct: 288 EELAKLFKAAKGDPLELPIVLAAYYGLRRSEIIGLRWDAIDFNPDDPKITIQFTVTEVNF 347 Query: 261 ---------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 K+ A RT+ L++P + L ++ K ++R+ + Y+ +Y Sbjct: 348 GDGQGNVIIEKEGTKSKASKRTLPLVKPIADLLLQKKKDIENNRRLCGSCYNDKY----- 402 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 L FV + + + + + +++ G+++ + RH+ A L G + Sbjct: 403 --LDFVHVNEIGER-----MKPNYISQHFALLLEKHGLKKIRFHDLRHSCASLLYANGVS 455 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 I +GH IY + + Sbjct: 456 LKQIQEWLGHSDISTTANIYTHLDYNSKIATANAI 490 Score = 84.8 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 68/230 (29%), Gaps = 36/230 (15%) Query: 9 EIRGRYIRIWFMFR---GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 + Y I ++ GKR +++ N KKA + + F Sbjct: 7 REKNGYYHIILNWKDGDGKRRSKSISTGLPVKGNKKKAEAMLLEAR-----------KTF 55 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE--STPI 123 + T + D W K K + T + + + + Sbjct: 56 KPEDIASGKNTPYHV-----FLDRWLKDKMNDFDEETYAVYSHNARVFIGPYFKSLNLQL 110 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 IR S + Y N K + +T+ ++ L +A + G+I + Sbjct: 111 HEIRTSTLEAYYNH------------EKTKNHASKKTILQIHEIITLSLNYAIELGWIES 158 Query: 184 KPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHG 233 P +G+ + L +E + + + + SG+R Sbjct: 159 NPAKGINP---ATDEVSVLFVDFLLEWLEMMRTRVRETTYASYNSGIRQS 205 >UniRef50_A4G7G1 Putative integrase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G7G1_HERAR Length = 387 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 121/419 (28%), Positives = 183/419 (43%), Gaps = 53/419 (12%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETL----KGWEITNSNIKKAGNLRALIVHEINS 56 M +GVE+R IRI F F+GK+ +ET+ + T +NIK A + A + ++ + Sbjct: 1 MGPRTSGVEVRETSIRIIFTFQGKQRKETICLDNEPLHPTPANIKYATRIAAEVRDKVRT 60 Query: 57 GEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRII 116 G F Y FPQS + T GE D W + EL +T+ + K + Sbjct: 61 GLFAYADYFPQSRHAK----PDHVGTVGEFMDKWYA--QLELKPSTLSEYKRMKENFWKP 114 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 + I +SDI + + RT +N + +L ++ A Sbjct: 115 ALGRKRVDKITHSDI---------------TTALKSGTWSSNRTRNNMLYMLRAVFNLAV 159 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQ----NLWKFAVYSGLRH 232 G I P ++ Q R KPDP S E N ++ S + N ++F +SGLR Sbjct: 160 ADGVIHKNPCATIENAQWQRKKPDPFSIVEANRIIASLHEKQHQQVANFYEFMFFSGLRT 219 Query: 233 GELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 GE L W +VDL K IV +R++ KT + RTV L AL+ALK Q T Sbjct: 220 GEGLGLDWANVDLHKRIVVIRQSFVR-GEMQETKT-SSERTVKLTNRALDALKRQKAWTL 277 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 + VF N ++S W A+K GIR R Sbjct: 278 LDK------------------SGRVFHNPSTNRPWAKEQNISEP--YWKPALKLLGIRYR 317 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDE-QIAMLNARL 410 PY+TR T+A L +GA PA++A+Q+GH ++ Y Y WI D +D+ ++ + A++ Sbjct: 318 RPYNTRATYATIGLMSGARPAYMAAQLGHS-LEVFYRDYADWIADQDDDREMGKIEAQI 375 >UniRef50_A1HTM7 Phage integrase family protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTM7_9FIRM Length = 393 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 75/406 (18%), Positives = 140/406 (34%), Gaps = 49/406 (12%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 + R + + + G+ T ++K R + R Sbjct: 11 SIYQRNDGLWVAAIVVGRN--------ADTGKPVRKVVYARTKAEAKQK-------RDAL 55 Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISH 125 + A T G+ W + + +T + + I +S Sbjct: 56 AAQYEAAYYVDADKITVGDWLAKWLDVYARPAVAPSTYDWYERICRVHLIPAIGHLRLSR 115 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 ++ + N L+ G++ RTV ++L LR A + G + T P Sbjct: 116 LQQMAVQQLLNSLVDA-------------GKSARTVQAVHSVLAMALRVARKHGLLRTLP 162 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESEK--GQSQNLWKFAVYSGLRHGELAALAWEDV 243 + V Q + PL+ E++AL+ + + +GLR GEL L W+D+ Sbjct: 163 TDDVAVPQVRKQDKRPLTPDEWDALLTAAQTAPDIFAALVVEWATGLRRGELLGLMWDDI 222 Query: 244 DLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 D ++ ++NVRR + I + PKT A R + + + ++ L+ R + Sbjct: 223 DFDRCLINVRRAVQIRRGGCVLADPKTEATKRVLPVPKEVMQVLRAHRARQMQCRLAAGP 282 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 + Q VF Y + R+ K AG+ +H RH Sbjct: 283 AW---------QDCGLVFPTS-----GGTLYDPRNWSKRFARIAKAAGL-DIGVHHLRHD 327 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 ++ AGA ++GH T +M+ ++Y + D + Sbjct: 328 LTSRIVAAGAPVKEAQYRLGHATVKMLLDVYAHRVTGGQDAITETI 373 >UniRef50_UPI0001C37419 Phage integrase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37419 Length = 386 Score = 287 bits (734), Expect = 7e-76, Method: Composition-based stats. Identities = 75/420 (17%), Positives = 132/420 (31%), Gaps = 53/420 (12%) Query: 6 TGVEIRGRYIRIWF----MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEY 61 + R I GK+ ++ ++ KKA L FE+ Sbjct: 2 ANITNRNGKFLIRVFTGRDISGKQIVKSTTYVPPEGTSPKKAEKLAQEY-------SFEF 54 Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIIICES 120 R F EL + + + E L T+ +SQ + I + Sbjct: 55 ERH------CKGYAQLNENMRFYELAEWYFENYAPEELKPTTVLNYESQYRNHIAPILGN 108 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 + I + + L +V ++ S+ R A Q GF Sbjct: 109 KKLKDITTPMLTEFLKVLGKEHH------------LNPISVRKVYIVVQSIYRRALQQGF 156 Query: 181 ISTKPFEGVKKLQRNRIKPDP-LSKTEFNALMESEKGQS-----QNLWKFAVYSGLRHGE 234 P + V ++ LS+ E + + + + + +++G+R GE Sbjct: 157 ARDNPCQNVIIPKKRDSGKRYSLSEEETKRFLHLIRDKPWDEDVKRILIVLLFTGMRIGE 216 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLT 291 LAWED+D EK + + L+ +D PKT + IR + + + L +Q Sbjct: 217 CLGLAWEDIDFEKKTIFIHHTLSCVDGKCYLDSPKTKSSIRLIAMNSTVEKYLNDQQAYV 276 Query: 292 GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR 351 + + Y V Q Y SS+ K Sbjct: 277 EQLKMALGNKYAH--------------PEMVFPSGQGNYRDRSSVYHSLKRMTKGTEFED 322 Query: 352 RNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + RH A LL +G + I+ +GH + IY + ++ +LS Sbjct: 323 MTLHKLRHCNATLLLNSGVDLKVISEHLGHCDIGVTANIYADVLRKQKIRLADTIDDKLS 382 >UniRef50_A6NXL1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NXL1_9BACE Length = 397 Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats. Identities = 75/419 (17%), Positives = 137/419 (32%), Gaps = 57/419 (13%) Query: 6 TGVEIR-GRYIRIWF-MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 G+ R F GKR + + + I F Sbjct: 12 KGIYQRKDGLYHARFVDKSGKRHEKYFQTVP--------------EAKNWIEEARF---- 53 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI 123 + + + T E W + +L NT++ + + + I Sbjct: 54 -----ADQHEDIFVPTETTVDEWFGFWIENIVGDLAPNTLRNYRERYAHNIQPVIGRMAI 108 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIST 183 S ++ ++ T+ + ++ + A + I+ Sbjct: 109 SSVKPMHCKKVLLQMDAI--------------YAGSTIRQAYITMGTMFKAAKMNDVIAK 154 Query: 184 KPFEGVKKLQRNR--IKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAW 240 P +GV+ + R L++ E + +++ K + + + +GLR GEL L W Sbjct: 155 HPMDGVRYTKPVRAVDDIKFLTRQEQSLFLQAAKKSHNYYQYALILETGLRTGELIGLTW 214 Query: 241 EDVDLEKGIVNVRRNLTILDMF-----GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 + VDLEK + V + L GPPKT RT+ L A E L+ + + Sbjct: 215 DAVDLEKRTLTVNKTLEFRHGLHTWRAGPPKTQHSYRTIPLTDRACEILQSVWNSRDTRK 274 Query: 296 KSEITFYHREYGRTEKQKL------HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 +S + EY + VF+ N + SS AGI Sbjct: 275 ESPLLSQTLEYIDRRTGSIAKLVMRDLVFI----NWRTGEPAKNSSYDTHLYKICDEAGI 330 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 +R + RHT+A + +G P + +GH + + + Y D D+ + Sbjct: 331 KRFCMHALRHTYATRAIESGIQPKVLQKLLGHASIKTTMDWYVHVTTDSLDQAVRQFEK 389 >UniRef50_A1SI41 Phage integrase family protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SI41_NOCSJ Length = 403 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 74/433 (17%), Positives = 137/433 (31%), Gaps = 63/433 (14%) Query: 3 KLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 K+ G+ RGR R + + W + +A R H ++SG + Sbjct: 4 KMKDGITQRGRGWTYVVRERDPETGRSRQRWVSGFTTRAEAKAARDAARHALHSGTYV-- 61 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 T E D W E L +T K + +++ S Sbjct: 62 --------------APQDITVAEWLDRWMDGHEVTLKPSTAKTYRDKIRLYLKPKLGSAR 107 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + + S L + + + RTV+ A+L + ++ A I Sbjct: 108 LQSLSPS-------GLTVVWRDLQASGGRSGAPLSRRTVEFARAVLHAAMQDAVVERIIQ 160 Query: 183 TKPFEGVKKLQRN-RIKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAW 240 P +G K +R+ + K + + + + + + +W +G+R GE+A L W Sbjct: 161 VNPVDGSKMAKRDGKPKHTTWTAAQVASFLTATTSDRWHPMWAVFASTGMRRGEVAGLRW 220 Query: 241 ED-----VDLEKGIVNVRR---NLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 D VDL+ G + V L + PK + RT+ + + L+ Sbjct: 221 SDSHGPIVDLDGGTIRVEVSTTQLDNRRVTTTPKNH-ERRTIAIDPDLVTVLRTWKATQA 279 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG---- 348 R + Y G V + + + A + Sbjct: 280 AERLAFGPGYADAEGI-------------VFTWEDGRPVMPDYISKTFLTAQTKLKELAA 326 Query: 349 ------------IRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID 396 + R + RHT A LL +G +A ++GH+ + + Y I Sbjct: 327 GPGDDAPATIVPLPRLVLHGLRHTHATILLRSGVPVHVVARRLGHKDPSVTLDTYADVIP 386 Query: 397 DMNDEQIAMLNAR 409 D + + + Sbjct: 387 DDDSSAVDVFWNA 399 >UniRef50_A4XLL4 Phage integrase family protein n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XLL4_CALS8 Length = 360 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 78/413 (18%), Positives = 140/413 (33%), Gaps = 70/413 (16%) Query: 8 VEIRGRYIRIWFMF----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 +E + ++ + GKR R+ K ++ + K + A N G+F Sbjct: 7 IEKKKGKFQVVLEYGIDGNGKRIRK-YKTFDKESEAKKYLIQMLA------NEGKF---- 55 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 E D W + + + T K K LK S Sbjct: 56 -----------------IPLNEFLDRWLEEYAKNYVAPKTYIKYKDSLK-HVRKAFPSHT 97 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 + + ++ + N+L + +V ++L + L+ A + + Sbjct: 98 LQQLNTFELQKFFNQLSQT--------------LSQASVRKIYSVLNNALKTAIKWNMLK 143 Query: 183 TKPFEGVKKL-QRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAW 240 P E VK + K +E K + A+++GLR GE+ L W Sbjct: 144 ENPLEFVKLPQKYEEKKIKVWDIETVKKFLEDIKDEKIHTAVTLALHAGLRAGEICGLTW 203 Query: 241 EDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 ++VD EK +++++ L + + PPK+ IRT+ + E L E+YK R++ Sbjct: 204 DNVDFEKKCIHIKQALQKIGKEIIIKPPKSKTSIRTIYMTSYLYETLLEEYKRQEPLREA 263 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 VC + + + V G + Sbjct: 264 YKKL-----------------GNFVCIHETGNPFCPDYFTHTFKKLVSCLGYPEIRFHDL 306 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHTFA LL A NP A +GH ++ +Y +D+ + + L Sbjct: 307 RHTFATILLQAQTNPKIAAEILGHSNTKLFLNLYAHVLDEQKIKATHKIEEIL 359 >UniRef50_C2VI23 Site-specific recombinase, phage integrase n=3 Tax=Bacillus cereus group RepID=C2VI23_BACCE Length = 392 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 70/407 (17%), Positives = 140/407 (34%), Gaps = 39/407 (9%) Query: 10 IRGRYIRIWFMFRG-KRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQS 68 + + +F +G K + ++ ++ + +E E Sbjct: 8 KKDPELYYYFNTKGVKLWCFRHRYYDSLGK-RREKYKQGYKLENEAYRDLLEVKTSIL-- 64 Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 +G T E DIW + + E ++ + ++ +K + ++ + Sbjct: 65 -SGEVKQVKNSNLTISEWLDIWYETHKNEWKISSCSQRENAIKYQMKPLLGKYKLAELDK 123 Query: 129 SDILN-YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 S Y NELL K TV + L + A I F Sbjct: 124 STYKRVYINELL--------------KKYKPSTVQLFHRLFKIAINAAVDDELIPRNRFN 169 Query: 188 GVKKLQRNRIKPDPLSKTEFNALMESEKGQ----SQNLWKFAVYSGLRHGELAALAWEDV 243 + + + + E N + + K + ++ ++GLR GE L W+++ Sbjct: 170 KITIPNEEKTVENFFTAEELNEFIAAAKKHENITNYSIILLLAFTGLRKGEALGLQWKNI 229 Query: 244 DLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 + E+ + V R PKT RT+ + + LK + S Sbjct: 230 NFEEKTLTVERTRDNKGTR-TPKTKNSFRTILIDDTLINQLKAYRTWCKKTKLSFGLHL- 287 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 Q F+F+ + + + L + +K +++ P+ RHT A Sbjct: 288 --------QDDDFIFISY----QSGTPITDNPLMYSFQRILKHTTLKKITPHGLRHTHAT 335 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 L++ IA ++G T QM+++IYG ++ +E +A + L Sbjct: 336 LLISQRIPVKVIADRLG-NTPQMIFDIYGHSFKELEEESVAAFSTSL 381 >UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus cereus group RepID=A7GRV3_BACCN Length = 376 Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats. Identities = 73/403 (18%), Positives = 152/403 (37%), Gaps = 56/403 (13%) Query: 18 WFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSST-----GA 72 +F RG++ T+ + + +K +I G F+ + +++ A Sbjct: 3 YFRKRGEKWSFTMDVGKDPITGKRK----------QITRGGFKTKKAAQEAAAKVTNDLA 52 Query: 73 KMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDIL 132 F +L +IW + KET +T+ + K L++ + +S+I+ + Sbjct: 53 NGDFENNDIRFSQLVEIWMQEKETTCRPSTLYQYKRILRSRVMPEFGDKKLSNIKPLTVH 112 Query: 133 NYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL 192 N+ +++ K+G T + + + +L +L + IS+ P + K+ Sbjct: 113 NFHQKMI-------------KEGLTTKYISSVDVMLKQILDKGVELEMISSNPAKKAKRP 159 Query: 193 QRNRIKPDPLSKTEFNALMESEK--GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 + + + + ++ K G + A+++G+R GE+ AL W D+D EK + Sbjct: 160 KVKKKAQASWTIEQAMTFIDCAKLKGSYYIAFVLALHTGMRIGEVLALQWGDIDFEKKTI 219 Query: 251 NVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG 307 +V+R LT++D + G KT A R + + + ++ L E K + + Sbjct: 220 HVQRTLTLVDGKYVLGETKTEASNRVIPMTEELVDELVEYQKYKKENPLDLLI------- 272 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLT 367 + K ++ + A + + + R TF L+ Sbjct: 273 ----------------CTRNKKIVHPYTIRYQMKALCEAIDVPYIRFHDIRRTFTTILID 316 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + N +A +GH IY ++ E L L Sbjct: 317 SNVNAKVVAKLLGHTNVSTSLNIYTDVYEERQIEAAEKLQNAL 359 >UniRef50_C0EE56 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE56_9CLOT Length = 348 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 115/341 (33%), Gaps = 28/341 (8%) Query: 79 VIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNE 137 F W K E +L T+ + + L+ + I + + + Sbjct: 14 GNIKFEVFAKQWFKEYAEVKLRERTIARYRQ-LEARTYAALGHLHMDKITVRHVQKFIHN 72 Query: 138 LLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRI 197 L R +T+ +Y++ + ++ +A + + P E V+ + + Sbjct: 73 LGEEGINQTTGGR-----LAPKTIHHYLSFVSTIFSYAIKMQMVKNNPCEHVQLPKAEQK 127 Query: 198 KPDPLSKTEFNALMESEKG---QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRR 254 + D + E + + + Q + A+Y G R GEL L W+D+D G++++RR Sbjct: 128 ELDCYTLEEAQEFLNLLQKEPLKYQAFFTLAIYGGFRKGELLGLEWKDIDFSTGVISIRR 187 Query: 255 NLTILDMFGP----PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 + G KT + R++ + L+ LK R + Sbjct: 188 SSLYTKGKGTFTDTTKTKSSQRSLKIADEVLQVLKRYQSQQIFDRARVGDQW-------- 239 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 V R+ +S +R G R + RH A L+ Sbjct: 240 ------VDTDRLFTKWNGEPMHPNSPYTWLKRFCERTGQRFLGVHQFRHLNATLLINNRV 293 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + I++ +GH IY + + +++ LS Sbjct: 294 DAKTISASLGHTQVSTPLNIYAHTFQESQAKASEVISNALS 334 >UniRef50_B0TI08 Phage integrase family protein n=14 Tax=root RepID=B0TI08_HELMI Length = 368 Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats. Identities = 74/409 (18%), Positives = 148/409 (36%), Gaps = 68/409 (16%) Query: 9 EIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQS 68 E R + F + K W T KK G + S +Y R F + Sbjct: 7 EKR-KTWYCAFRY---------KDWTGTTRQHKKRGFAK-------KSDAVQYERDFIKK 49 Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 +G FG + +++ + +T L T + K + + + + + P++ I Sbjct: 50 QSGG------CDMAFGSMVELYMEDCKTRLRPTTYEGKKYLIDSKILPVFKDMPVNAITP 103 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 + + ++N LL + + + L ++ +A + + T P Sbjct: 104 ATVRKWQNGLLDD-----------ESDYSPTYLKTINNQLSAIFNYARRYYGLQTNPAAV 152 Query: 189 V-KKLQRNRIKPDPLSKTEFNALMESE--KGQSQNLWKFAVYSGLRHGELAALAWEDVDL 245 ++N + EF + K S ++ ++G+R GEL AL D+D Sbjct: 153 CGSIGKKNAESMQFWTTDEFRLFAAAISDKPASYAIFNTLFWTGMRSGELLALTLNDIDF 212 Query: 246 EKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 E +++ ++ + + PPKT R +T + LE LK+ Sbjct: 213 ESKKISITKSYARVGNEDVISPPKTPKSRRVITASEFLLEILKDY--------------- 257 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 + + +F Y+ L + K +G+++ + RH+ A Sbjct: 258 --AGRLVDYEPSDRLFD-----------YTKHFLASEMARGCKLSGVKKIRIHDIRHSHA 304 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 L+ G +P I+ ++GHE+ + + Y + + E L+A S Sbjct: 305 SLLIELGFSPLLISERLGHESVETTLQTYAHLYPNKHGEVADKLDALNS 353 >UniRef50_D1CCF9 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCF9_THET1 Length = 357 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 73/409 (17%), Positives = 133/409 (32%), Gaps = 71/409 (17%) Query: 9 EIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQS 68 R + G+R ++A ++ Sbjct: 12 RRRDGRWVAAVVHAGRRISRY-------AKTRREAQKQLRELLE---------------- 48 Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 + + T + W +++ EL +T + ++ + + Sbjct: 49 AAAEHRLVPPNKLTLEQYLAEWLEVRSRELRVSTRVNYQRLIEQHICPALGGRRLQALAA 108 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 ++ + L R ALL L A + G ++T P + Sbjct: 109 LELSRWLAGLGERL---------------PRRAQEAYALLHKALADAVRLGLLATNPLDR 153 Query: 189 VKKLQRNRIKPDPLSKTEFNALMESEK----GQSQNLWKFAVYSGLRHGELAALAWEDVD 244 V+ + R +P ++ + L+ + + G L F + SG R GE L W DVD Sbjct: 154 VEPPKHQRRRPTLPARDQIALLIAALEAGKAGWYSELLLFLLGSGCRIGEALGLEWGDVD 213 Query: 245 LEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITF 301 ++G V + R L + PPK+ AG R + L ALEAL++Q Sbjct: 214 WQEGSVRISRQLLEVGGEVHESPPKSRAGERVIALPAFALEALRQQRA------------ 261 Query: 302 YHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTF 361 K+ + F+ + ++ +A G+ R + RH Sbjct: 262 ---------KKLGKYCFLSSTGTTPCR-----RNVLRALHAVCAELGLPRLRIHDLRHVH 307 Query: 362 ACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A L AG P S++GH + + ++Y +D + E L L Sbjct: 308 ASLLAHAGVPPKVAQSRLGHSSPMVTLQVYQHVLDGADREAALRLERVL 356 >UniRef50_A8LF05 Integrase family protein n=1 Tax=Frankia sp. EAN1pec RepID=A8LF05_FRASN Length = 416 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 73/401 (18%), Positives = 136/401 (33%), Gaps = 43/401 (10%) Query: 18 WFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTT 77 + ++ + + N K+ I +R + S + T Sbjct: 33 VYWREDRQRWVIEIDYGVVNGRRKRVPRYFRTQEEAIE------EQRKARQSKADGLTTL 86 Query: 78 RVIKTFGELCDIWTKIKE--TELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 F + W +E +T + + S + +++ D+ + Sbjct: 87 DRRSRFADFLTYWLDEIVDPSERAESTKSNYRVMVNNHIRPALGSRRLVELKHEDLQRFL 146 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN 195 N G + T+ ++L L A + IS E ++ + Sbjct: 147 NRKAAD-------------GYSTSTMRTLRSVLRQALNEAVITEKISRNVAETLRVPKAR 193 Query: 196 RIKPDP--LSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 + K + LS+ + L+ K + L+ GLR GE AL W D D G + V Sbjct: 194 KPKRNVAALSRDDGLRLLAEAKSTRHYALYVLLAMVGLRRGEALALRWSDFDESAGTLRV 253 Query: 253 RRNLTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG 307 R +T + + GP K+ AG RT+TL + L+ HR++ + Sbjct: 254 VRQVTRVSGVKGLVVGPTKSQAGTRTLTLPTRCVRVLQAHRTAQHAHRQAAGKRW----- 308 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLT 367 ++ +F V + L + +RAG+ P+ RHT A Sbjct: 309 ----KENGLIFPSTVGT-----HMEPRGLNTHLSKLCQRAGLPHLGPHALRHTAATMAYA 359 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 G + I +GH +IY +D ++ + + L+A Sbjct: 360 LGVDWKQIQQMLGHTMLSTTMDIYVDLVDSVHRDAASKLDA 400 >UniRef50_A6GR01 Phage integrase n=3 Tax=Proteobacteria RepID=A6GR01_9BURK Length = 450 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 82/398 (20%), Positives = 156/398 (39%), Gaps = 61/398 (15%) Query: 44 GNLRALIVHEINSGEFEYLRRFPQSSTGAKM----------------------------- 74 + A IV EI G F Y FP S K+ Sbjct: 2 ERVMAGIVAEIKKGTFRYRSAFPSSRNLEKIEALETEQYQPTSPMVSIPMANQSVRQAVD 61 Query: 75 -VTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 +++ TF E + + E+ + ++ + L+ I IS I D+L Sbjct: 62 NISSSGHPTFTEFAQKFIEENESLWKRSNIRTKRDILEKWLIPQFGKRVISSITKQDLLE 121 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 +R+ L + + +++ + + +L A F T P++ +K+++ Sbjct: 122 FRSVLAKA------PGKKPGTTMSASRINHVMTSVKQVLDEA-ADRFNFTTPYQNIKRMR 174 Query: 194 RNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 + P + E +++ + ++ + ++G+R GE+ L W+ +D EK ++ +R Sbjct: 175 IKKTDVTPFTIEEVEMIIKYCREDFRDYFTVKFFTGMRPGEIHGLKWKYIDFEKRLITIR 234 Query: 254 RNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQK 313 + D PKT R + + EALK Q+ K Sbjct: 235 ETIV-DDYEETPKTADSNRDIQMAPQVYEALKAQW-------------------GVTGTK 274 Query: 314 LHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPA 373 +VF N P + + W ++ G++ R PY TRHTFA +L AG +P Sbjct: 275 SPYVF----ANCNGGPLTNRNMSNRVWYPMLRSLGLKLRTPYQTRHTFATLMLAAGESPE 330 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 +IA QMGH + +M++++Y ++ ++ + L+ Sbjct: 331 WIAFQMGHSSTEMLFKVYSRYVPNLTRRDGSAFERMLA 368 >UniRef50_A4XMV7 Phage integrase family protein n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMV7_CALS8 Length = 332 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 64/336 (19%), Positives = 121/336 (36%), Gaps = 42/336 (12%) Query: 75 VTTRVIKTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 + TF E D W + + + +T K+ + LK + + P++ ++ DI N Sbjct: 30 KVSNSSITFKEFVDYWFEAYASTAVKPSTQKRYRQLLKP-ALRAIGNKPLNKVKPLDIQN 88 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 L + + T+ LL + + A +IS P + V Sbjct: 89 IYIALAGTQ--------------SNCTILKLHRLLHEIFKHAQMWEYISDNPVKKVVPPT 134 Query: 194 RNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 + D +E K + A+++G+R GE+ +L W DV+ E ++++ Sbjct: 135 PEKKVFDVWDVETAKRFLEIIKDEPIYYPALIALHTGMRAGEILSLKWCDVNFETRVISI 194 Query: 253 RRNLTILDMFGP--PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 ++ KT R V + + LK Y++T Sbjct: 195 VKSERKNRGLKTVNLKTKTSKRAVYMNDILYKELKNLYEITKP----------------- 237 Query: 311 KQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGA 370 + FV C +V+ L ++ VK+ + RHTFA +L+ G Sbjct: 238 -KPDDFV-----CPRLPTGNLTVNYLSRKFKKLVKKHNFPLIRFHDLRHTFATLMLSLGV 291 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 N +A +GH ++ + Y + M +E + Sbjct: 292 NTKIVAEILGHSDIKLTADTYSHVLPTMQEEAMKEF 327 >UniRef50_Q0REL9 Integrase (Recombinase) n=2 Tax=Frankia RepID=Q0REL9_FRAAA Length = 442 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 78/417 (18%), Positives = 134/417 (32%), Gaps = 64/417 (15%) Query: 25 RCRETLK-GWEITNSNIKKA-GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 R R T+ GW+ K G R + ++ + Q G K+VT T Sbjct: 39 RWRATVDLGWKDGKRQRKYLSGKTRTEVAEKLRT-------LHRQQEDGVKVVTGNKPLT 91 Query: 83 FGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 + W + + +T+ + ++ + + + + ++ Sbjct: 92 VDQWLTFWLDTIASRKVRPSTLATYRGYVRNRIVPELGGYRLDRLEPEHLESFYA----- 146 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 G TV ++ L+ A++ G ++ V R + P Sbjct: 147 --------ACESDGLAPATVLQMHRIISRALKIAHRRGKVARNVATLVDAPTVQRDEVSP 198 Query: 202 LSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEK--GIVNVRRNLTI 258 LS E A++++ KG W A+ GLR GE L W VDL+ + VR+ L Sbjct: 199 LSAKEARAVLDTAKGGRNPARWSVALALGLRQGEALGLPWNAVDLDSTPATLTVRQALQR 258 Query: 259 LD-------------------------MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 + PK+ AG RT+ L L+ Sbjct: 259 RAWAHGCTDPKSCGLARRCPQRTGGGLVIVHPKSRAGRRTIVLPAGLAADLRAHRSAQQQ 318 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 + T + E+G VF S+ W +K AG+R Sbjct: 319 EAEEAGTGWRNEHG--------LVF-----TQPTGHPIDPSADHRAWKNLLKAAGVRAAR 365 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RHT A LL +P + MGH + Y +++ + + A L Sbjct: 366 LHDARHTMASLLLAQKVHPRVVMEIMGHSQISLTLGTYSHVAPELSTDAANQMGATL 422 >UniRef50_C9C7Z3 Phage integrase n=2 Tax=Bacilli RepID=C9C7Z3_ENTFC Length = 344 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 114/356 (32%), Gaps = 49/356 (13%) Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 G + T + K F + +W + + + +T TK T + + I I Sbjct: 7 EKGLQASTAQKSKKFEYVYGLWFENYKKTVKESTWSSTKQIFDTHILKVFGDKFIDKIDV 66 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 N + ++ +A I++ P + Sbjct: 67 FFCQEAVNTWSDSH---------------PKIFKKIKNYTSNVFDYAASLQIITSNPMKL 111 Query: 189 VKKLQ-----RNRIKPDPLSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALAW 240 V + + +K E +E+ + + ++G+R GE AL W Sbjct: 112 VSIPRGEALDIEDKNIEFYTKEELIEFLEAIRNDDDERYLFFSLLAFTGIRKGEAFALTW 171 Query: 241 EDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 D+D + +N+ + +T + PK+ +G R + L + L++ Sbjct: 172 SDIDFKSKTLNINKTVTRGYQGRLIVNTPKSKSGKRKIYLDNDLISLLRKY--------- 222 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG--IRRRNP 354 Y + Q + +F Y+ + + N K +R Sbjct: 223 -----YTKNKTIVTIQSENLIFHH------DGLLYNPTVSRSWLNVIYKHHPELTKRITT 271 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RHT A L +GA+ + ++GH Q IY + N + I A + Sbjct: 272 HGFRHTHASLLFESGASLKDVQERLGHADIQTTSNIYTHVTETQNKKVINNFVAFM 327 >UniRef50_A2RHC7 Phage integrase n=3 Tax=root RepID=A2RHC7_LACLM Length = 394 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 117/342 (34%), Gaps = 30/342 (8%) Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F ++ +W + + T++ +++L + I + + N+ + Sbjct: 69 FKDIAMLWFDSYKLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQIVNQWMINA 128 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN----RIK 198 + L+ KG + Y ++ + + A G + P V + K Sbjct: 129 SQPLNGAYHRPKG-KGKDFKIYFNIVERIFKHALSLGLVKDNPCVNVIVPKVRLESTEKK 187 Query: 199 PDPLSKTEFNALMESE----KGQSQN-----LWKFAVYSGLRHGELAALAWEDVDLEKGI 249 L+ + E K + N L + V SGLR GE AL+W D+D + G Sbjct: 188 VKYLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSDIDFKTGS 247 Query: 250 VNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 V+V + + PKT+ R V + A+E LK + S Sbjct: 248 VSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIG---------- 297 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 K K VF R ++ ++ + + + RH+ A LL A Sbjct: 298 -KGKQELVFPNRT-----GGVLDYQTMRPFLIKWLRACQLPQVGFHGFRHSHASLLLNAD 351 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 I ++GH + +M + Y D + + + + Sbjct: 352 VPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFESIAN 393 >UniRef50_C0EC03 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC03_9CLOT Length = 440 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 75/410 (18%), Positives = 129/410 (31%), Gaps = 49/410 (11%) Query: 22 RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIK 81 GKR + + + N A N+ I E + + + + Sbjct: 46 NGKRKPKWIPTHKKVKGNKTWANNMLPTIRKEWTEKLLQEA--TASQQSASPSGPSSAAI 103 Query: 82 TFGELCDIWTKIKETE----------LTTNTMKKTKSQLKTLRIIICESTP--ISHIRYS 129 +F + W + K + +T + QL P + + Sbjct: 104 SFVDFLYQWLEYKYKSATGRVMDSKPIELSTYSGYEQQLNNPIAPYFREHPVALCDLTKQ 163 Query: 130 DILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV 189 DIL + + L TV +Y AL+ L +A I + P + + Sbjct: 164 DILAFYEKELERVK--------------PTTVKHYHALIHGALNYAVDKNLIPSNPADRI 209 Query: 190 KKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFA-VYSGLRHGELAALAWEDVDLEKG 248 + K D +E L E KG L + GLR E+ L W D Sbjct: 210 IISKPEPFKGDYYLDSEVLNLFEVIKGHKIELVVLLTAFYGLRRSEVIGLKWSAFDFNHN 269 Query: 249 IVNVRRNLTILDMFGP--------PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 ++R +T ++ G K + +RT L+ E L E K +RK Sbjct: 270 CFSIRHTVTTCNVKGERVTIKKDKAKNKSSLRTYPLIPFLKERLLEAKKQQEENRKLCGR 329 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 Y++EY + VC + + + + + + +R + RHT Sbjct: 330 AYNKEY------------LGYVCVDVIGNLIKPNYVSSTFGKLLAKNNLRHIRFHDLRHT 377 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A LL G + +GH +IYG + A + + Sbjct: 378 CASLLLANGVPMEQVKEWLGHSEISTTVDIYGHLQYATKKQSAAAIEQDI 427 >UniRef50_Q98MQ9 Bacteriophage integrase n=5 Tax=Rhizobiales RepID=Q98MQ9_RHILO Length = 399 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 127/398 (31%), Gaps = 46/398 (11%) Query: 22 RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIK 81 + KR + G ++A + ++ ++ G + + Sbjct: 28 KKKRKWHSFTG------TKREAQKECSRLITVLDQGLYV----------------EPTKQ 65 Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T E + W + + T ++ + + + +S ++ I L Sbjct: 66 TVAEFLNEWLAFVKPSVAPKTHERYTEICRKGLSPLIGNVILSKLKTDRIDAAFTTALTA 125 Query: 142 ETLYLDNPRSNKKGR---TVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIK 198 + + ++ RTV +Y +L L A +S P + R K Sbjct: 126 PRVDHRTKKDQREPLPPLAPRTVHHYRRVLVKALGQAVTWERLSRNPATATTPPKVERQK 185 Query: 199 PDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDVDL--EKGIVNVRRN 255 + L+E+ + + AV GLR GE+ AL W ++L + +++ + Sbjct: 186 MLAYDVGQTATLLETLRPTRMFVPVLLAVTCGLRRGEILALRWRHLELGDNRRQMSIEES 245 Query: 256 LTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 + PK+ RTV L + LK + + Sbjct: 246 AEQTADGVRYKEPKSGRA-RTVALSASTVAELKAHRARQAEEQLRLGIRPDAD------- 297 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 V SL W + + + R + RHT A +L+AG +P Sbjct: 298 -------SFVVAQVDGQPLQPRSLTHEWVRVLGKTSLPRIRFHDLRHTHATQMLSAGVHP 350 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + ++GH + ++Y + M + ++ L Sbjct: 351 KIASERLGHSNIGITLDLYSHVMPGMQADAAEQVDVAL 388 >UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC Length = 431 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 69/399 (17%), Positives = 124/399 (31%), Gaps = 43/399 (10%) Query: 33 WEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWT- 91 + T G ++ ++ Q+ + + T W Sbjct: 56 PDGTQRRRPVYGKTADIVREKLTK---------MQAQSDQGIPAEATGWTMERFLTYWLS 106 Query: 92 KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRS 151 I T++ + ++ I ++ + D+ N + L Sbjct: 107 DIVTPACKPRTVQGYEVIVRNYLIPAIGKKRLNKLNGVDVRNLLKRVRGTCLCCLHGTDR 166 Query: 152 NK---------------KGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 + + + R V ++L ++L A + + + K Sbjct: 167 RRPVKQRRCCAVGRCCHQAPSARLVQQVHSVLRNVLGAAVREELVGRNVAKLAKVSGPTY 226 Query: 197 IKPDPLSKTEFNALM-ESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 LS + + L+ + + L+ A+Y GLR GE+ L WED+D E + VR + Sbjct: 227 KVHRGLSADQASHLLKAAAHDRLYALYVLALYLGLRRGEILGLRWEDIDFEDETLAVRHS 286 Query: 256 LTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQ 312 L + PKT RT+ LL + L+E R++ + Sbjct: 287 LQRVGGHLRVVAPKTRTSERTLPLLPLIAKVLREHQARQDAERETADVNWR--------- 337 Query: 313 KLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANP 372 + FVF + +L W G+ + RHT LL AG P Sbjct: 338 ETGFVFTTAIGT-----PIEPDNLRRSWLPLCGVLGLEGVRFHDIRHTCVTLLLNAGVPP 392 Query: 373 AFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + GH + EIY D + L L+ Sbjct: 393 HVVREIAGHSAIDVTMEIYAHASLDDKRAALQKLVDELA 431 >UniRef50_B6FZV4 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZV4_9CLOT Length = 377 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 73/417 (17%), Positives = 131/417 (31%), Gaps = 61/417 (14%) Query: 7 GVEIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + +G GKR R +G K+A L E+ ++ Sbjct: 3 SLRKKGDRWYFSVELPQENGKRKRVERRG----GKTKKEAQEKMKLFEAEVLKNGYK--- 55 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE-TELTTNTMKKTKSQLKTLRIIICESTP 122 TF EL +IW +T K I + Sbjct: 56 -------------KECKMTFDELYNIWFNEYVLNNCKESTTNNYARYYKKHIKPILGNYK 102 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY-QSGFI 181 +S I+ + ++ N+L + + + + ++ S L +A I Sbjct: 103 VSDIKARVLSDFFNKLKEEDKCH-------------SSANIIRVVISSCLDYAIFPLEII 149 Query: 182 STKPFEGVKKLQRNRIKPDPLSK--TEFNALME--SEKGQSQNLWKFAVYSGLRHGELAA 237 + +K + + K +F +++ S K N+ +++GLR GE Sbjct: 150 ENNSCKFIKFPKFKKTKDKKDIIDMKDFETILDIGSSKHNFNNMCLLLLHTGLRIGEALG 209 Query: 238 LAWEDVDLEKGIVNVRRNL----TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 L WED+D + I++VR L PKT IR + + K K Sbjct: 210 LQWEDIDFDNKIIHVRHTLIAPNVRECKLSTPKTKTSIRDIYFNDTVEKVFKNIKKSQNE 269 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 +R Y+ V + + ++ I + Sbjct: 270 NRLKFGVLYNCN--------------NMVFTHEDGSFLDHHHFTNMVAKINRKTNI-NFS 314 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RHT A LL AGAN + +++GH IY ++ + + N + Sbjct: 315 MHTFRHTHATMLLQAGANMKDVQARLGHADISTTMNIYVQDTEESKKKALDKFNDYI 371 >UniRef50_C4RQL8 Integrase n=2 Tax=root RepID=C4RQL8_9ACTO Length = 395 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 78/411 (18%), Positives = 140/411 (34%), Gaps = 51/411 (12%) Query: 8 VEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 +E G RI + RGK + T++ T ++ K A E Sbjct: 6 IEKNGPVYRIRDLVRGK--KVTIQTGYPTKTSAKNA---MVQFRAE-------------- 46 Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 G ++ T + W E L + ++++ + I + + Sbjct: 47 QLQGNALMPRGGQITLADFVGEWWPSYEKTLKPTAVNSEGNRIRNHLLPILGHLTLDELD 106 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 + N+L G + ++ R +K +T+ N LL ++ A + I P Sbjct: 107 GQVTQQWVNDLEAGVGPWPESTRGRRKPLAAKTISNCHGLLHTICGAAIAAKRIRLNPCS 166 Query: 188 GVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEK 247 +R + LS E L+ + + L V +GLR GE L VDL Sbjct: 167 STMLPRREPKEMKFLSDPEIGRLITALPPHWRPLVMLLVATGLRWGEAIGLRAGRVDLLA 226 Query: 248 G--IVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 + V L L +F PKT G RTV+ L Sbjct: 227 ARPRLTVVEQLQELASTGELVFQSPKTAKGRRTVSFTTKVALLL---------------- 270 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 K+ VF + + W A + AG+ + RHT Sbjct: 271 ----TPLIAGKKSDEVVF-----TAPKGGMVRTRNFRRIWVKACEEAGLPGLRIHDLRHT 321 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 A L++AG + I+ ++GH + + +YG +++++ +A + ++ Sbjct: 322 HAAILISAGRPLSAISRRLGHSSIAVTDLLYGHLREEVDEGILAAIEEAMA 372 >UniRef50_C9CDR3 Site-specific recombinase n=2 Tax=Enterococcus faecium RepID=C9CDR3_ENTFC Length = 388 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 63/413 (15%), Positives = 123/413 (29%), Gaps = 46/413 (11%) Query: 14 YIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAK 73 I+ + G R L + N K+ ++ E + E ++ TG Sbjct: 2 SIQKYTTKSGARYSVRLYVRKD--ENGKQEYYVKKGFKTEKEAKLHEARKKVEIEDTG-- 57 Query: 74 MVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 F + + W + T ++TK + + + IS I N Sbjct: 58 -YHKPSNDLFITVYEEWLPSYRNRVQETTYQRTKDLFRLHILPKFGNKSISKITPVHCQN 116 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 NE + + + + +A + + P + Sbjct: 117 AVNEWA----------------LKFKNIKQLKSYSSQIFEYAIFAELLHRNPMANTNLPK 160 Query: 194 RNRIK-PDPLSKTEFNALMESEKG----QSQNLWKFAVYSGLRHGELAALAWEDVDLEKG 248 R + + + S E A + + +++ + +G+R GELAAL W D+ E+ Sbjct: 161 REKKENENYFSLEELKAFWDILNKEEPLKHILIFQLLITTGIRKGELAALHWSDIYFEEQ 220 Query: 249 IVNVRRNL------------TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 ++ VR++ + + K + R + + +E LK K Sbjct: 221 LMYVRKSYATIRNEEKNARRKTVRIQKNTKNISSERILPIDAQTIEMLKIWKKEQARELL 280 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 K +F +G K+ + + Sbjct: 281 QFGI--------NTNTKNQLIFTYVNADGDINQPLHADYSNNILKRLEKKYKFKHVTIHG 332 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 RHT A LL GA+ ++GH+ A+ Y + + A Sbjct: 333 FRHTHATLLLEGGASIKETQDRLGHKNAETTLNTYSHVTEKAQRNALEKFIAY 385 >UniRef50_C0EDT0 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDT0_9CLOT Length = 462 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 70/478 (14%), Positives = 139/478 (29%), Gaps = 102/478 (21%) Query: 8 VEIRGRYIRIW----FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + RG +I + GK+ R+ + ++ Sbjct: 4 ITKRGNTYKITVSCGYDSGGKQIRQHMTWKPAPGMTKRQIEKELERQK-----------V 52 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 F ++ + + + W E L T+ LK + Sbjct: 53 LFEENCRSGQFI--SGSIKLADFAQRWMSEYAEKHLKAKTIAHYNELLKR-ILPALGHIK 109 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPR-------------------SNKKGRTVRTV-- 161 + ++ ++ + + L R S + G +V T+ Sbjct: 110 LDKLQPHHLIQFYDNLSESGIREDIKQRCSTDFKKVLKQHGFTKVELSKRAGVSVATLDS 169 Query: 162 ----DNY------------IALLCSLL-------------------------RFAYQSGF 180 N L L A Q Sbjct: 170 VSQGKNITGQSARRICEAFHIKLQELFTPVDADRGLAAKTINSHHRLLSSMLNTAVQWQI 229 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE---KGQSQNLWKFAVYSGLRHGELAA 237 I + P + VK + R + L + + L+ Q Q + +Y+G+R GEL Sbjct: 230 IFSNPCDRVKPPKLERKEARYLDEKQTAQLITCLQREPEQYQTMVLLLIYTGMRRGELCG 289 Query: 238 LAWEDVDLEKGIVNVRR-NLTILDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 L W D D+E ++ ++R +L + D KT + R + L A++ L + Sbjct: 290 LEWPDFDMEHKLLYIQRESLYLPDRGIFEDTTKTYSSTRVIKLSDEAVKLLIQHKFAQNA 349 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 R + V ++ +L ++ V++ + + Sbjct: 350 ERAKLGDAW--------------VDTGKIFTTCTGKPIHPDTLTTWFHKFVQKNDLPPVS 395 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + RHT A L+ G N +A ++GH ++Y I ++ + L+ Sbjct: 396 VHSLRHTNATLLIANGVNLTTVAGRLGHADTGTTTKVYAHAIKTADEMAAETIQNILN 453 >UniRef50_C7CS77 Predicted protein n=3 Tax=Enterococcus faecalis RepID=C7CS77_ENTFA Length = 377 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 63/382 (16%), Positives = 126/382 (32%), Gaps = 59/382 (15%) Query: 41 KKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTT 100 K+A + + E++S F TF ++ ++W + Sbjct: 43 KEAKLALSRLELEVDSKGFVKQNYS----------------TFKDVYELWYAQYVNTVKP 86 Query: 101 NTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRT 160 T T+ + + + I+ + N+ + + +K Sbjct: 87 ITAGHTERMFRLHILPEFGNIKINKLTKLMCQKAVNKWSKEYSAFHLLKSITQK------ 140 Query: 161 VDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR----IKPDPLSKTEFNALMESEKG 216 +L +A I P + V ++++ K L +E + K Sbjct: 141 ----------MLHYAVAQDIIDINPMQYVVMPKKDKTNETKKKQFLELSELKDFLAEAKE 190 Query: 217 ----QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD---MFGPPKTNA 269 Q +++ ++G+R GEL AL WED+++ + V + LT + + PKT A Sbjct: 191 TLNFQDYLIFRVLAFTGIRKGELYALTWEDINISYKQLTVNKTLTRIGKEYIISTPKTKA 250 Query: 270 GIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKP 329 RT+ L + L K +T+ +F K Sbjct: 251 SNRTIGLDDTTVSELIVWKKHQKQELLKYG-------FKTKSNDKQLIFH-----RKNNT 298 Query: 330 YYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYE 389 + + ++ +K + +P+ RHT A L +GA + ++GH + Sbjct: 299 LHYPEHINFLLSSEMKTS----LSPHSFRHTHASLLFESGATIKDVQKRLGHTNVNTTMD 354 Query: 390 IYGMWIDDMNDEQIAMLNARLS 411 IY + I L+ + Sbjct: 355 IYTHVTKSSERKAIDKLSNYAN 376 >UniRef50_Q1CP24 DNA integration/recombination/inversion protein n=7 Tax=Streptococcus RepID=Q1CP24_STRPF Length = 387 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 76/402 (18%), Positives = 140/402 (34%), Gaps = 63/402 (15%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GKR + ++ G R + + + ++L S G+ + VIKT Sbjct: 34 GKRVKTSITG------------RTRKEVNQKAKHAQLDFL------SNGSTIKRKVVIKT 75 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F EL +W + + + T T ++L + + + I SDI N L Sbjct: 76 FKELSHLWLETYKLTVKPQTYDATVTRLNRHIMPTLGNMKVDKITASDIQMLINRLSKYY 135 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRN---RIKP 199 Y +++ +L+ G I + ++ + K Sbjct: 136 VNYTA----------------VRSVIRKVLQQGVLLGLIDYNSARDIILPRKQPNAKKKV 179 Query: 200 DPLSKTEFNALMESE----KGQSQNLW-----KFAVYSGLRHGELAALAWEDVDLEKGIV 250 + ++ + +E + + + + +GLR GE AL W D+DLE G + Sbjct: 180 KFIDPSDLKSFLEHLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTI 239 Query: 251 NVRRNLTI-LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 + + L KT +G R +++ + L +LK + Sbjct: 240 AINKTYNKNLKFLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQL-----------FNEV 288 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 + VF + Y++ S + + K AGI R + RHT A LL AG Sbjct: 289 GARVSEVVFATPT-----RKYFNASVRQSALDTRCKEAGIERFTFHAFRHTHASLLLNAG 343 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + + ++GH M + YG D E + ++ Sbjct: 344 ISYKELQYRLGHANISMTLDTYGHLSKDKEKEAVLYYEKAMN 385 >UniRef50_Q65EQ4 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=15 Tax=Bacillus RepID=Q65EQ4_BACLD Length = 364 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 76/392 (19%), Positives = 136/392 (34%), Gaps = 48/392 (12%) Query: 21 FRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVI 80 ++ K TN N + R SGE + Sbjct: 4 YKDKERGTYYFIISYTNRNGEYKQIKRRGFKS---SGEAKRAEAETLLRLETDDGENEDN 60 Query: 81 KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 TF + + K + ++ KT S + T I S I++IR DI+ ++N+LL Sbjct: 61 PTFEFVAKEYLKWYKKRRKASSYLKTSSIINTHLIPRFGSKKINNIRSRDIMRFQNDLLD 120 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE---GVKKLQRNRI 197 V V +L ++ FA + + P V Sbjct: 121 R--------------YAVAHVKKIHQVLSAVFNFAIKQEYTKDNPARLAGNVDI--EEDK 164 Query: 198 KPDPLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL 256 + + EF A ++ Q L+ YSG+R GEL AL W D+D + +N+ + + Sbjct: 165 HINYWTLDEFKAFIQHVDDQLYYALFMTLYYSGMRKGELLALTWGDIDFDSNTINIDKTV 224 Query: 257 TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 + PKT + IR + + + + L + T Sbjct: 225 -YNRIVTKPKTTSSIRKIMMPKHVMRLLAQLKAKTKTK---------------------- 261 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 M V G+ + S ++L ++ VK A +++ + RH+ A +L+ P+ +A Sbjct: 262 --MTYVVFGEFHDHISTTTLDRKYAEYVKAAKVKKIRLHDFRHSHASYLINRNTIPSVVA 319 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 ++GH+ IY E + + Sbjct: 320 KRLGHKDVGTTLNIYSHLYPSTEKEAVLKMED 351 >UniRef50_UPI0001C375B8 hypothetical protein RflaF_20511 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C375B8 Length = 465 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 77/420 (18%), Positives = 136/420 (32%), Gaps = 44/420 (10%) Query: 10 IRGRYIRIWFMFR---GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 ++ + F ++ GKR R+ + + K IV E + E Sbjct: 13 VKNGKHYVVFDYKDHSGKRKRKWVNTELPEKCSKKALKEAVEAIVAEFDKSISEGEIAVK 72 Query: 67 QS---STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP- 122 + T + W + + T + K I E+ P Sbjct: 73 SANAVPYAVMSDETASTMLLDDFFTEWLTYIKPNVARTTHLCYRKVSKRYMEYINENYPN 132 Query: 123 --ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 + + ++ I NY N L G T Y L S +A + Sbjct: 133 LTLGQVNHNHIQNYLNYKLDS-------------GCKGSTAKQYYLALHSAFAYAVKMEL 179 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWK-FAVYSGLRHGELAALA 239 I P + + + R + + E N L E KG L A Y GLR E+ L Sbjct: 180 IPKHPMDKLVVPRAERHEATFYNADELNELFEVFKGDKLELVVNIAAYYGLRRCEILGLR 239 Query: 240 WEDVDLEKGIVNVRRNLT-------ILDMFGPP--KTNAGIRTVTLLQPALEALKEQYKL 290 W+ +D + + ++R + + +F KTN+ RT+ L+ E L E+ K+ Sbjct: 240 WDAIDFKNKTITIQRKIVSDYDDNGEIKIFVETRLKTNSTRRTLPLIPHIEEMLLEKKKM 299 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 +K+ Y++E F +C S + ++ + R G++ Sbjct: 300 EVKFKKACGKSYNKE------------FDGFICRDNYGNMISPGYVTQHFHYIITRNGLK 347 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + RH+ A LL I +GH + +Y + + L Sbjct: 348 HLRFHDLRHSCASLLLAHDVPMKAIQEWLGHSNFSITANLYSHLEYNAKVNSAETIARVL 407 >UniRef50_C5UUP0 Phage integrase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUP0_CLOBO Length = 391 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 75/420 (17%), Positives = 140/420 (33%), Gaps = 61/420 (14%) Query: 13 RYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGA 72 + I + GK + + +I + + Sbjct: 3 KTIYKKKLKNGKEYYFHRLRHKNLRKPKDIYAKTVKELEEKIKLITHDLDYNIQNNKDC- 61 Query: 73 KMVTTRVIKTFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRII-ICESTPISHIRYSD 130 F W + L +T + ++ + I I D Sbjct: 62 ----------FETFFSDWLFDVHFMGLKPSTQMRYETIYRNHIKNSELSDIKIKEITSKD 111 Query: 131 ILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK 190 I Y N + K+G +V V + ++ +R+AY + FI + Sbjct: 112 IQTYYNNKI-------------KRGCSVTLVKSIHKIITPCIRYAYNNNFIIKNFTSALI 158 Query: 191 KLQR-------NRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWED 242 + + P + E + +G + + ++ A+ SGLR GEL AL W+D Sbjct: 159 LPKETEKDKLNKKSSVIPFTLEEQKKFISVIRGNKFEMIFLTALNSGLREGELLALTWKD 218 Query: 243 VDLEKGIVNVRRNLTILDMF-------------GPPKTNAGIRTVTLLQPALEALKEQYK 289 ++ + +NV +NL+++ PKT GIR V++ ALK+ K Sbjct: 219 INFKDKYINVNKNLSVVTEISKENGRGGSTLEVQTPKTKKGIRKVSIPSFLATALKQYKK 278 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 +R FY + VF + N Y + + R+ ++ + Sbjct: 279 QQIKNRLKMNQFY---------NDNNLVFCDELGN-----YLNRDKIVYRFKKVLEDNKM 324 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + + RHT+A L G + + S +GH + + Y +D M + + LN Sbjct: 325 KEIKFHDLRHTYATRLFELGESAKTVQSFLGHSDISVTLDTYTHVLDSMKETTASKLNDL 384 >UniRef50_D1XEM4 Integrase family protein n=1 Tax=Streptomyces sp. ACTE RepID=D1XEM4_9ACTO Length = 435 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 72/428 (16%), Positives = 146/428 (34%), Gaps = 44/428 (10%) Query: 5 PTGVEIRGRYIRIWFMFRGKRCRETLKGWEI--TNSNIKKAGNLRALIVHEINSGEFEYL 62 +R + + R T ++ G R + ++ Sbjct: 8 SPSRRVRANGDGTVYQRKDGRWEAAGYVLAPGNTRKRVRVYGTTRTEALAKLTE------ 61 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE-LTTNTMKKTKSQLKTLRIIICEST 121 +++ + + W + L NT + + + I Sbjct: 62 ---KIATSNRGVPVPSAQGSVSAYLTYWLEAVAVHQLRENTHTRYTTCVNQHLIPGLGKK 118 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNK-------------KGRTVRTVDNYIALL 168 ++ + D+ + N+L + +++ K + T+ ++L Sbjct: 119 KLAKLTAKDVRTWLNQLRTTCQCSVRAIDAHRDQPRCCAAGTCCSKRLSPLTLAYIHSVL 178 Query: 169 CSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEK-GQSQNLWKFAVY 227 S L A + I+ V+ + +PL+ E + + + + L++ A+ Sbjct: 179 KSALEHAVREEEITRNVARNVRTGTPRPRRFEPLTADEARQFLAAVRNDRLFALYELALR 238 Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQPALEA 283 +GLR GEL L W+D+DL G ++RR L G P KT A R + L + + Sbjct: 239 AGLRKGELLGLQWKDLDLHNGTASIRRTLQRTQTGGLTALPTKTRASERRIALPSECIHS 298 Query: 284 LKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAA 343 KE + RK+ + + VF ++L ++ Sbjct: 299 FKEHRAVQEGERKAAAEGW---------KDNGLVFRTSA-----GGPIDPANLNRSFHTL 344 Query: 344 VKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQI 403 ++RAG+RR + RH+ A LL G I +GH + +Y + + + Sbjct: 345 LERAGLRRIRFHDLRHSTATLLLEQGVELVVIKELLGHAHIGVTATVYAHVRLRLQRQAV 404 Query: 404 AMLNARLS 411 L++ L+ Sbjct: 405 ETLSSTLA 412 >UniRef50_D2Q711 Phage integrase n=2 Tax=Bifidobacterium dentium RepID=D2Q711_9BIFI Length = 367 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 70/392 (17%), Positives = 135/392 (34%), Gaps = 50/392 (12%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 KR R T + + + + + + + + + Sbjct: 12 DKRYRVTYRDPDHSQRTKRGFRRRKDAQDYLARMTTYIADNDY--------IDPNAGKTL 63 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 + D W K K+ + + + + I+ IR+S+I + +EL Sbjct: 64 VCQFADTWLKGKKNVVKPKYYADLECSWRVHVCNAWGNREIASIRHSEIQTWVSELA--- 120 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 K R+ +L +L A + G I P +G + ++ R + L Sbjct: 121 -----------KKRSATITIRAHGVLKGVLDLAVRDGSIRRNPADGCQLPRKQRKERTYL 169 Query: 203 SKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMF 262 + + + G Q L + GLR GE AAL + VD + + VR + Sbjct: 170 TPAQVID-LAHAAGTYQALILTLGFCGLRWGEAAALRVKHVDTQNNRLRVRLSWVRSGKK 228 Query: 263 ---GPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM 319 G PKT +R V + + A+KEQ + G VF Sbjct: 229 HFEGAPKTW-EVRDVPVPDQVMSAIKEQCEGKGPE--------------------DLVFT 267 Query: 320 PRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 ++ + + A++ +G+ + RHT A +++GAN + + Sbjct: 268 APSGGHLREQ---SAKNHGWYARALRDSGVPTLTCHDLRHTAASIAISSGANVKAVQRML 324 Query: 380 GHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 GH+ A M + Y D D+ ++++++ Sbjct: 325 GHKNAAMTLDTYADLFDTDLDDVATSISSKIA 356 >UniRef50_A6NRR1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NRR1_9BACE Length = 377 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 61/407 (14%), Positives = 123/407 (30%), Gaps = 56/407 (13%) Query: 13 RYIRIWFMF----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQS 68 + ++ + G+R ++ T + + A + E+ S Sbjct: 17 KAYYVYMDYGRDEDGRRVKKYR-----TCATLAAARRVLREFQSELES------------ 59 Query: 69 STGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 + T + + W + E T+ + + P+ + Sbjct: 60 ----RQQVAPRALTLDQWLEYWMEQVVEPNRAETTIYGYRKIIDNHLSDALGDIPVQKLT 115 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 + Y L+ KG + TV + LL + L A + I P E Sbjct: 116 PRHLQEYYAMLMRD------------KGLSPNTVRRHHDLLSAALHTAVRQDIILRSPTE 163 Query: 188 GVKKLQRNRIKPDPLSKTEFNALMESEKGQ-SQNLWKFAVYSGLRHGELAALAWEDVDLE 246 V+ + + E L +G + + K A GLR E+ L W VD Sbjct: 164 RVEPPRVVPREVGYYGPEELKKLYALAEGTGLELVVKLAGMLGLRREEICGLQWSSVDFA 223 Query: 247 KGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 + +++ T + K + R + + + L+ + +R + + Sbjct: 224 QRRIHICAARTAAGGEIIQKETKNRSSTRVLHMSDELVRLLRRERAGQAENRLALGDKWE 283 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 S +++ + ++R + + + RHTFA Sbjct: 284 DSGLVAVDH--------------MGHPLSPNAVSLAFTRFIRRNNLPKITLHGLRHTFAT 329 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 GA I +GH T IY +D ++ + + A L Sbjct: 330 VASAQGAPLFDIGKALGHSTPATTGRIYTHLLDQNHEATLDRVAAAL 376 >UniRef50_Q636X3 Phage integrase n=18 Tax=Bacillales RepID=Q636X3_BACCZ Length = 381 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 70/406 (17%), Positives = 149/406 (36%), Gaps = 43/406 (10%) Query: 18 WFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTT 77 F G ++ + K + + E + + + Sbjct: 3 SFRKFGDVWEFRVRFKD--PYTQKYKEKSKRGFKTK---KEAQLAAAEEEKKLLNGLEVE 57 Query: 78 RVIKTFGELCDIWTKI-KETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 + W K+ K+ + NT + ++ I ++ I ++ + N Sbjct: 58 ITPTSLKHYLRDWLKLFKQDNVRKNTFILHERNIEKHIIPYFQNMNIKELKPMMYQKFIN 117 Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 L +G + RTV + + ++ A I P E V +N Sbjct: 118 SLTD-------------QGYSKRTVQIIHGTMNNAMKKAVSLKKIENNPCEEVVISNKNN 164 Query: 197 IKP---DPLSKTEFNALMESEKGQSQNLWKF---AVYSGLRHGELAALAWEDVDLEKGIV 250 + + + +++ + + F + +G+R GE AAL W+D++L++ + Sbjct: 165 KEREGLKYMRSEDIPLFLKTSYQYNYIYYIFFKALLNTGMRKGEAAALQWKDINLKEHTI 224 Query: 251 NVRRNL-----TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 + + L T ++FG KT RT+ + + ++ L K ++ Y E Sbjct: 225 TISKTLDFTAKTKEELFGDTKTFTSKRTIMIPKSLVDELLAHKKWQNANKLVLQDAYEHE 284 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWL 365 L VF + + S+L ++ +K+A + R + RHT A L Sbjct: 285 --------LDLVF-----SRVDGKFLPKSTLFNAFSRILKKANLPRLEIHSLRHTHAVLL 331 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 L +GA+ +I ++GH++ ++ +Y D +N + I+ A ++ Sbjct: 332 LESGASMKYIQDRLGHKSIEITSNVYSHISDKINKDSISGFEAYMN 377 >UniRef50_A7VEW1 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VEW1_9CLOT Length = 379 Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats. Identities = 76/419 (18%), Positives = 152/419 (36%), Gaps = 63/419 (15%) Query: 2 SKLPTGVEIRGRYIRI-WFMFR-GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEF 59 +L G+ + + + F R G+R + I + Sbjct: 8 KELGVGISQQTNGLYVARFTDRFGRRKSKRF--------------KKLQECRQWIADATY 53 Query: 60 EYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICE 119 + + W +K+ + NT++ + + + E Sbjct: 54 IDE---------HSDLENATDMLVDAWFEYWIDLKKKTVRPNTVRNYSERYERNIKNVIE 104 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + ++ ++ +++ +G T+ L ++L FA ++ Sbjct: 105 NKLLTEVKPIHCQKIFSDMAD-------------EGYKTTTIYQTRIALYNMLEFAKENE 151 Query: 180 FISTKPFEG-VKK-LQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELA 236 I T P + VK + + K + L+ + + + KGQS ++FA+ +GLR GEL Sbjct: 152 VIITNPCKKSVKSDIGKPSDKKEALTIDDQRRFLAAAKGQSYEYQYRFALQTGLRTGELV 211 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDMFG-----PPKTNAGIRTVTLLQPALEALKEQYKLT 291 L WED++ E+ + + R++ G PPK+ +G RT+ L A+ LK Q + Sbjct: 212 GLKWEDINFERKTLTIERSMEFRYKVGEWRVGPPKSKSGYRTIPLTDEAICILKAQKEKN 271 Query: 292 GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRR 351 + + K+ VF+ R S+ +AGI+R Sbjct: 272 RKIKVID------------KEWADTVFLCRK-----GQPVKNSTYDTALFKICDKAGIKR 314 Query: 352 RNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + + RHTFA + G P + +GH + +Y ++ ++I ++ L Sbjct: 315 FSMHVLRHTFATRCIEGGMMPKTLQKILGHSNIGITMNLYVHITEEEKQKEIDLVAEAL 373 >UniRef50_B0MMM2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMM2_9FIRM Length = 398 Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats. Identities = 70/422 (16%), Positives = 139/422 (32%), Gaps = 48/422 (11%) Query: 4 LPTGVEIRGRYIR--IWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEY 61 L V+ + + I GK ++N K +V Y Sbjct: 7 LAASVQAKKGRLYAVIQVRENGKTKPVWRALGLPESANKSKVNKAYREVVQAFEQ---SY 63 Query: 62 LRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIIC--- 118 + Q+ + + K E + +T + + + Sbjct: 64 AEQIAQNKK------PASDIPIYDYMCAYYKKIEKNIQKSTAESYRGMINGRIRRYFTAR 117 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 + + I DI ++ + + + TV +Y +L S + A++ Sbjct: 118 KDLTVGSITAKDIEDFYDWMFESHVV-------------ANTVIHYHTVLHSAFKRAFKD 164 Query: 179 GFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAA 237 G I + PF+ + + ++N+ D S+ E A++ +G A GLR E Sbjct: 165 GLIESNPFDRIDRPKKNKFTGDNYSEEELIAMLGLIRGDIIYPAVMLAGGLGLRRSEALG 224 Query: 238 LAWEDVDLEKGIV----NVRRNLTILDMFGPP----KTNAGIRTVTLLQPALEALKEQYK 289 W VD EK + + + P K + RT+ L P E L E+ + Sbjct: 225 ARWSRVDWEKKTILLDTKIIEYKENGKVIVEPVEEMKNKSSRRTLPLPDPVYEMLCEERE 284 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 +R+ Y+R+Y +C + + + R+ +++ G+ Sbjct: 285 KQDLYRRMFKGSYNRKY------------DDYICVDQLGGLIRPNRVTQRFADLIRQYGL 332 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 R+ + RHTFA L+ +++ +GH IY E +++ Sbjct: 333 RKIRFHDLRHTFASILINQDVPLLNVSTFLGHSDLSTTANIYAHLDKSKKQESADVISNI 392 Query: 410 LS 411 + Sbjct: 393 FN 394 >UniRef50_B9E9M6 Integrase n=12 Tax=Staphylococcaceae RepID=B9E9M6_MACCJ Length = 388 Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats. Identities = 69/404 (17%), Positives = 136/404 (33%), Gaps = 46/404 (11%) Query: 24 KRCR--ETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIK 81 KR + L ++T + EI R Q + Sbjct: 14 KRYQFNVYLGIDKVTGQKKRTTRRFNKKRDAEIEL-------RKLQLQGLENNTQSIHKY 66 Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T+ ++ +W + TE+ T+ +S+ K+ + PI I NE Sbjct: 67 TYEDIYLMWIENHRTEIRGTTLASKESKFKSRILPKFGRIPIKEISRVYCQTVVNEWSKE 126 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIK--- 198 + ++Y+ + +A + I P E + R K Sbjct: 127 MKAF----------------NDYVIQARLVFNYAMKLELIDKNPMEYITLPSRLEDKVFV 170 Query: 199 ---PDPLSKTEFNALMESEKGQSQN----LWKFAVYSGLRHGELAALAWEDVDLEKGIVN 251 L+K E M + +++ L++ ++G+R GE+ AL W D++ + Sbjct: 171 EQSRKFLTKEELKQFMIYLEEENKTQNTCLFRLLAFTGMRKGEVLALHWSDINFVNKDLY 230 Query: 252 VRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 V++ L ++ + PPKT R + + + L + + Y Sbjct: 231 VKKTLAKVNNKHVLQPPKTRESQRWIDIDNQTISKLLQWKEEQKLQ-------YEEYGFS 283 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA-GIRRRNPYHTRHTFACWLLT 367 K +F + Y VS+ + A KR + + + + RHT A L Sbjct: 284 VASDKEQPIFSTYHTRLNEMKYMRVSTPNDKLEAFFKRHSDLHKIHVHGFRHTHASLLFE 343 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 +GA + +++GH + +IY ++ N ++ Sbjct: 344 SGATLKEVQTRLGHSDIKTTMDIYTHITQSSREKLADKFNTYVN 387 >UniRef50_C7IDP6 Integrase family protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IDP6_9CLOT Length = 483 Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats. Identities = 70/487 (14%), Positives = 153/487 (31%), Gaps = 100/487 (20%) Query: 7 GVEIRGR-YIRIWFM----FRGK--RCRETLKG-WEITNSNIKKAGNLRALIVHEINSGE 58 +E RG+ R+ GK + ++T+K ++ K+A +L + EI + Sbjct: 4 SIEKRGKNSCRLIVSGGIGQDGKYIKYQKTIKFNYDDEKKRQKEAEKELSLFIAEIEKNQ 63 Query: 59 FEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIII 117 + T + + W K +T L T+ + + L + + Sbjct: 64 Y----------------IEPSRLTLSDFAEKWIKDYGKTNLAPKTLYRYEEMLNSRILPA 107 Query: 118 CESTP----------------------------------------------ISHIRYSDI 131 + I DI Sbjct: 108 LGHLKIEKIKPTHLLEFYNNLSEDGIRLDSKYKAKKEFNELLKTLEISLYDLQKISLVDI 167 Query: 132 L-----------------NYRNEL---LHGETLYLDNPRSNKKGRTVRTVDNYIALLCSL 171 + L + + + +T+ ++ L+ ++ Sbjct: 168 RTLKRVAKSETISMSTAVKIIDSLKQNIKKIKIEDYFEVIETGKLSDQTIKHHHRLISAM 227 Query: 172 LRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG---QSQNLWKFAVYS 228 L A + + P E V+ + + + +++ L+ + + Q + A+Y+ Sbjct: 228 LEKAVKWQLLLNNPAERVEPPKVVKGEVPHYDESQAVTLLNYLEKEPIKFQAMVNLALYA 287 Query: 229 GLRHGELAALAWEDVDLEKGIVNVRRNLTILDM----FGPPKTNAGIRTVTLLQPALEAL 284 +R GE+ L W+D+++++ +N+R+ + PK + RTVT+ + +E L Sbjct: 288 QMREGEIMGLEWKDINMKERTINIRQAAQYIPKRGVFIKEPKNESSKRTVTVPKNVMEIL 347 Query: 285 KEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAV 344 KE K+ K T + + + + ++ + Sbjct: 348 KELRKIQMQEEKEAGTRWKKNNNEQNTDANE--VRKFIFTTWDGELMHPYTPTKQFKKFI 405 Query: 345 KRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIA 404 G+ + + RHT LL GA+ ++ + GH IY + + Sbjct: 406 DLYGLPKLTFHGLRHTGITLLLGNGADIDSVSRRAGHSQRSTTLNIYSHSLRSKDVANAN 465 Query: 405 MLNARLS 411 L L+ Sbjct: 466 KLGNILN 472 >UniRef50_C0VGS2 Phage integrase n=2 Tax=Acinetobacter RepID=C0VGS2_9GAMM Length = 402 Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats. Identities = 99/420 (23%), Positives = 168/420 (40%), Gaps = 56/420 (13%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL- 62 LPTG R I+I F + GKR TL T +N KA +R V++ G + Sbjct: 9 LPTGTRARSGKIQINFKWNGKREWFTL-ALTDTPANFSKAAKIREDFVNKAKYGILKIED 67 Query: 63 ------RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRII 116 + F ++ + + TF + + ++ T KK S L+ L + Sbjct: 68 IEAVTVKPFKKADAAQESLPASHGPTFAQYAQEYL-YNLSDHKHGTKKKYLSILERLWMP 126 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 + PI+ I + + N ++ + +T ++ + L A Sbjct: 127 LFADMPINTISSQMLRSAVN---------------GREWSSAKTRNDALIPLRGAFELAN 171 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-------QNLWKFAVYSG 229 I P + +K + +PDP ++ E ++ + + + A ++G Sbjct: 172 DDEIIDKNPCDRLKNQKTQETEPDPFNEIERERILNWLREKYLADYPTVYWYFVVAFWTG 231 Query: 230 LRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 R E+ AL W+DVD +++ + KTN R V L A EA ++ Sbjct: 232 CRPSEIIALTWQDVDFLNKQIHINKGRVNGVQQETTKTNKA-RFVDLNDFAFEAFQQLRL 290 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 LT K VF +C+ + + + SL ++ AA+K GI Sbjct: 291 LTYL-------------------KYEHVF---ICDETGEEFTTQKSLSEKFVAALKANGI 328 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMN-DEQIAMLNA 408 R R Y+TRHT+A L G NP ++ASQ+GH M+ + Y WI+ E+IA ++ Sbjct: 329 RYRPAYNTRHTYATVCLMNGLNPVYVASQLGHS-LVMLMKRYAKWINSDKNKEEIAKISN 387 >UniRef50_UPI0001C3741D prophage LambdaBa04, site-specific recombinase, phage integrase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3741D Length = 395 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 79/426 (18%), Positives = 140/426 (32%), Gaps = 62/426 (14%) Query: 9 EIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 RG+ +F GKR R + G+ N +A V E EY Sbjct: 7 RKRGKKWEYYFEIAKMDGKRKRISKGGF-----------NTKAEAVSEGVKAMHEY---- 51 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPIS 124 A V T + + + W ++ L T+ K ++ ++ Sbjct: 52 ----QTAGTVNTPSELSMHDYLNYWIEMYCIPNLKPTTVANYKKYIRLHISPKIGKYRLA 107 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ-SGFIST 183 I + N+++ G + TV +L S L +A Q ++ T Sbjct: 108 TITAEQLQKLINDMVAN-------------GYSKNTVIGIKGVLSSSLNYAVQPLHYLKT 154 Query: 184 KPFEGVKKLQRNRI-------KPDPLSKTEFNALMESEKGQSQNLW--KFAVYSGLRHGE 234 P VK + +R K + + K + + S FA + G+R GE Sbjct: 155 SPMAYVKIPKGSRTNYRSSQYKREVIEKDIIDEIFVRFPKGSSTYLPLMFAYHCGMRLGE 214 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDMFG-----PPKTNAGIRTVTLLQPALEALKEQYK 289 A+ W++V+ V + + L PPK N+ RT+ + + +E LKE + Sbjct: 215 AFAITWDNVNFTDRTVTINKQLQWDLEKKFWYLTPPKYNSS-RTIDIDETIVELLKEMQE 273 Query: 290 LTGHHRKSE-----ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAV 344 ++ + +Y E G E F+ NG ++ + Sbjct: 274 KQIRAKEYYADEYSLIYYDEELGINESTGNVIDFVNVYENGGFIQPRTIQHTSQVIHKFY 333 Query: 345 KRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIA 404 + RHT LL AG ++ ++GH+ + +IY + Sbjct: 334 -----PAFTFHSLRHTHCTRLLEAGLPIKYVQERLGHKNISVTMDIYNHLTQSQAELSKR 388 Query: 405 MLNARL 410 L Sbjct: 389 ALEDVF 394 >UniRef50_C1SH90 Site-specific recombinase XerD n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH90_9BACT Length = 399 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 86/400 (21%), Positives = 153/400 (38%), Gaps = 55/400 (13%) Query: 7 GVEIRGRYIR--IWFMFRGKRCRETLKGWEITNSN------IKKAGNLRALIVHEINSGE 58 + RG+ R I FMF+G R E + T + + A L + I +I Sbjct: 3 SIRRRGKKARLEIIFMFQGIRRYEQSLYYCETGKDTCKCQDCRSASALLSEIERKIAEKT 62 Query: 59 FEYLRRFPQSS--TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRII 116 F+Y FP S + + F ++W E+ + +T K + + Sbjct: 63 FKYETYFPDSKYVRENQQLHLNSDMFFDTYAELWLSSIESSVAYSTYKTYSTAVSK-LSS 121 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 +S I+ S I Y + + +T+ NY+ + S+ A Sbjct: 122 YFSRFKLSEIKPSHIQQYISN----------------SELSAKTIANYLGVFHSIFESAV 165 Query: 177 QSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL---WKFAVYSGLRHG 233 + +S P + VKK + K DP S E + +++ + ++ + Y+G+R G Sbjct: 166 RDDLLSKNPCKHVKKPRVQTEKVDPFSIEEVSMILDWMRQHHPHMTIIFALGFYTGMRVG 225 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 E AL W D+D + + V+R +T + KT A R + ++ E L ++ Sbjct: 226 EAIALKWSDIDFKHHKIIVQRTITKNRIKESTKT-ADYRVIDIIPMLDEYL--HFQKQYT 282 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG-ARWNAAVKRAGIRRR 352 KSE +P+ ++ + +K G+R R Sbjct: 283 FMKSEWV---------------------TVTSYGEPFTKTQNITEDYFKPCLKALGLRYR 321 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 RH+FAC +L A +I + +GH + QM++ YG Sbjct: 322 ILNQMRHSFACMMLDAREEINWIKNMLGHSSLQMLFRKYG 361 >UniRef50_Q1QXU7 Phage integrase n=4 Tax=root RepID=Q1QXU7_CHRSD Length = 388 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 123/412 (29%), Positives = 198/412 (48%), Gaps = 31/412 (7%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 + GVE+RG +R++F ++G+ CRE L G + T NI+ A L +I +EI++G F+Y R Sbjct: 1 MADGVEVRGNTVRVYFRWQGELCREPLPG-KATERNIEHARRLVTIINYEIDAGTFDYAR 59 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPI 123 FP+S + TFG D+W IK+ EL ++ + S+ +T + Sbjct: 60 HFPESRRLHES-------TFGFYLDLWLAIKKNELAYSSYRGIASKAETHVRPRWGNEQA 112 Query: 124 SHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLR-FAYQSGFIS 182 I + ++ ++ + L +T+ ++++ R +A ++ + Sbjct: 113 DDIDHIELQDWIQKDLATH-------------LANKTIKEVVSIMRQTFRLYATRNKK-A 158 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQ--NLWKFAVYSGLRHGELAALAW 240 P G+ + PDP K E ++E+ + Q NL KFA+Y G R E ALAW Sbjct: 159 FDPTLGINIRLPDDEDPDPFEKAEIRKILETPTKRVQELNLMKFAMYDGPRISEAQALAW 218 Query: 241 EDV-DLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEI 299 EDV D+EKGI+ RR + F KT R LL+PA EAL+EQ+ LTG+ Sbjct: 219 EDVLDVEKGIIRYRRAVVR-GRFKVTKTKRSTRVHHLLKPAREALQEQFALTGNLPAQTY 277 Query: 300 TFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRH 359 R+ ++KL VF+ + KP+Y + W +++AG+R R P RH Sbjct: 278 QVVDRDNRTVRQEKLRLVFLNSLS---GKPFYENAIRQRFWKTHLEKAGVRYRGPNQCRH 334 Query: 360 TFACWLLTAG-ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 TF +L+ G +IA+ +GH + M+ YG WI + M+ L Sbjct: 335 TFISQMLSLGVVPLHWIANHVGHSSITMIQRRYGKWIHADGQDVPTMIEKLL 386 >UniRef50_Q24ZE5 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24ZE5_DESHY Length = 308 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 114/315 (36%), Gaps = 35/315 (11%) Query: 114 RIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLR 173 + + +S +R ++ + L P + R++ Y A+L S+L Sbjct: 6 ILPQLGNLKLSDLRPGHLMKFYKYLEQDGIRQDGKPGK----LSDRSIRYYHAVLSSMLE 61 Query: 174 FAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE---KGQSQNLWKFAVYSGL 230 A + I++ P V+ + R + +T+ L+++ + + L A+Y+GL Sbjct: 62 DAMKWQLITSNPAARVEAPKVRRKQTTSYDETQSAELLQALYSEPIKYRVLTTLALYTGL 121 Query: 231 RHGELAALAWEDVDLEKGIVNVRRNLTILDMFG----PPKTNAGIRTVTLLQPALEALKE 286 R GEL L W+ +D+E + V + G KT R +++ + LKE Sbjct: 122 RRGELLGLEWKVIDMENAQIAVVKQSQYTPETGVVDRKTKTEGSQRLISIPTSIVTLLKE 181 Query: 287 QYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVK- 345 R + + ++ ++ + +N + Sbjct: 182 YKAAQNEERLKVGSLWQPS--------------DKLFTTWNGKPMHPDTVSSWFNDFLTR 227 Query: 346 ---------RAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWID 396 +A + + RHT A L+ G ++S++GH + + +IY + Sbjct: 228 YNEKTIQQGKASLPHIRFHDLRHTSASLLIAQGVPLKNVSSRLGHSSIAITADIYASALQ 287 Query: 397 DMNDEQIAMLNARLS 411 + E L L+ Sbjct: 288 SADKEAAQKLEDILN 302 >UniRef50_A5N1D5 Phage integrase-related protein n=2 Tax=Clostridium kluyveri RepID=A5N1D5_CLOK5 Length = 392 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 70/396 (17%), Positives = 141/396 (35%), Gaps = 46/396 (11%) Query: 22 RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIK 81 G R + +G+ + K+A A ++ + ++G + Sbjct: 28 DGSRNQLRKRGF----KSKKEAQLYIADVIMKSSNG----------------YNFSGDKI 67 Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 E W K + + L+ +T K+ ++ PIS + I + L Sbjct: 68 LLKEYLKRWLKTEGSSLSPSTQKRY-NEFCVHISNHLGEIPISKLTGLQIKEFYKNL--- 123 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDP 201 + KKG + T+ +L L A + G I +K + + Sbjct: 124 --EQPQVYSNFKKGLSRSTILKVHRMLHKALTDAVRDGTIDRTVISNIKYGSVEKTETKV 181 Query: 202 LSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD 260 + F + ++ K + L A +GLR E+ L WED+D+ K ++ V+RN Sbjct: 182 WDNSTFYSFLDKIKEELIYLPVLLAFETGLRQSEITGLKWEDIDINKKLLTVKRNYGYDA 241 Query: 261 MFG-----PPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLH 315 + KT + +R + L +E LK+Q + ++ Y Sbjct: 242 LKKSLSDKKTKTKSSLRVINLFDNTIENLKKQKQQQRLNKLLYGKAY------------- 288 Query: 316 FVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFI 375 + +C + + R+ VK+ ++ + RH+ A LL +P + Sbjct: 289 -IESGYICTTSNGNPINPLYISKRFAQLVKKHNFKKIRFHDLRHSHATMLLKENVHPKIV 347 Query: 376 ASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + ++GH + + + Y D+ + N ++S Sbjct: 348 SQRLGHSSIAITLDTYTHVSTDIEKNALLSANEKIS 383 >UniRef50_C5WGZ4 Integrase n=18 Tax=root RepID=C5WGZ4_STRDG Length = 362 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 64/400 (16%), Positives = 123/400 (30%), Gaps = 77/400 (19%) Query: 20 MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRV 79 GKR +G+ + A + E++ + Sbjct: 23 YVNGKRKYIRREGF----KTKQAARETLINLQAELD--------------------KPKS 58 Query: 80 IKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELL 139 TFG L D W K E + +T KT+ + + + I I I E Sbjct: 59 SMTFGALTDQWLKEYEKTVQGSTYLKTERNINKHILPKLDKVKIGDINPLLIQRLTEEWC 118 Query: 140 HGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP 199 + + L+ ++L A + G+I+ P + + R + Sbjct: 119 NDLKYGG----------------KILGLVRNILNLAVRYGYINNNPALPITPPKIKRKRK 162 Query: 200 ---DPLSKTEFNALMESEKGQSQ----NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNV 252 + + + +E + L++ ++G+R GEL AL W+ DL +++ Sbjct: 163 MNNNFYTLDQLKQFLELVEKTDNIEKIALFRLLAFTGIRKGELLALTWD--DLNGNTLSI 220 Query: 253 RRNLTILDM---FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 + +T + KT + R ++L LE L E + Sbjct: 221 NKAVTRTQVGLEIDVTKTKSSDRLISLDDETLEILLELRET------------------- 261 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 F + + + S +K + + + RHT A L +G Sbjct: 262 ------FPTSTLMFQSESGGIMTPSLPRKWLLQIIKGTDLPQITIHGFRHTHASLLFESG 315 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + + ++GH Q +Y D+ N Sbjct: 316 LSLKQVQHRLGHGDLQTTMNVYTHITQSAIDDIGTKFNEF 355 >UniRef50_C1B977 Putative integrase n=2 Tax=Nocardiaceae RepID=C1B977_RHOOB Length = 368 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 78/404 (19%), Positives = 147/404 (36%), Gaps = 63/404 (15%) Query: 12 GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTG 71 G+ + + +R +G+ + ++A + A + E GE+ Sbjct: 12 GKRWEVRYRTP-ERKSTRRRGFT----SKRQAQDFAATVEVEKMRGEYV----------- 55 Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 T GE+ W + KE++L + + ++ + + +S + + Sbjct: 56 ---PPKLGHITMGEVGPAWLERKESDLKPSAYRSLETSWRVHVKPRWGTVRLSDVDLDAV 112 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK- 190 + +L + + V +L +L A + ++ P GV+ Sbjct: 113 ERWIADL--------------NRTKGATVVIRAYGVLAGILDSAVKGKRLARNPARGVEN 158 Query: 191 KLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 ++ R L+ E AL +S G+ + L Y GLR GE L +DL + Sbjct: 159 LPRKQRKPRVYLTHDEVAALADSA-GEKRALVLVLAYCGLRWGEAIGLRVRHLDLLRKRA 217 Query: 251 NVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYG 307 V N ++ G PK++ R+V + +E L Q + Sbjct: 218 TVVENAVQVNMEMHVGTPKSHKS-RSVPIPGFVVEELARQCE------------------ 258 Query: 308 RTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLT 367 K + VF R + ++ S + AV+++G+ R P+ RHT A + Sbjct: 259 --GKGRDDLVFPGRDGDYLKRSV----SFTGWFTKAVEKSGVPRLTPHDLRHTCASLSIA 312 Query: 368 AGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 AGAN + +GH +A M + Y +D D L+ +S Sbjct: 313 AGANVKSLQRMLGHASAAMTLDTYSDLFEDDLDAVGDALDQAVS 356 >UniRef50_C1SH28 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SH28_9BACT Length = 410 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 99/416 (23%), Positives = 169/416 (40%), Gaps = 52/416 (12%) Query: 8 VEIRGRYIRI--WFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 V +R R+ F + RCRE L + + A L+ I G FEY F Sbjct: 9 VRVRKDKDRLLLDFYYSDVRCREYLS-VQANKEGRRYAERQAKLLEQAILDGNFEYAEWF 67 Query: 66 PQSSTGAKMVTTRVI-KTFGELCDIWTKI-----KETELTTNTMKKTKSQLKTLRIIICE 119 P S + R KTF E+ + W + K EL T++ + LK+ + Sbjct: 68 PNSKKCRLFNSVRKSHKTFAEVAEEWKEHVERLHKAGELKRTTLRNYMNSLKS-ILDYFA 126 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + +I S + +Y+ ELL K + ++++N + L + +AY+ G Sbjct: 127 IYEMQNITKSLVDDYKFELLD-------------KPLSKKSINNKLTPLRRIFDYAYEMG 173 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE---KGQSQNLWKFAVYSGLRHGELA 236 +I + VK + +P ++ E A++ + ++ ++G+R GE+ Sbjct: 174 YIEHNVMDRVKNFTLELPEIEPFNQLEVQAILNHLQKNNPKFHAMFTILFHTGMRIGEVL 233 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 A+ W++ D +V+ + T PKT A R V L A++AL+ + T Sbjct: 234 AMKWKNFDEMFCSYHVKEHFTE-KRLDTPKTKASKRIVPLTDEAMKALRNHKQYTFM--- 289 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA-RWNAAVKRAGIRRRNPY 355 K F+F CN P+ S ++ W +K+ GI R Y Sbjct: 290 ----------------KSDFIF----CNQYGDPWVSSDNIMKQVWEPMLKKLGIAYRIIY 329 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RHT A + AG N A IA +MGH+ + Y ++ + +Q + + LS Sbjct: 330 QCRHTHASLSILAGDNLAHIAERMGHKNVGTLITRYAKYVKSVQFQQP-KIGSFLS 384 >UniRef50_A8RK44 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RK44_9CLOT Length = 366 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 70/335 (20%), Positives = 125/335 (37%), Gaps = 41/335 (12%) Query: 81 KTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLH 140 F + ++ K + L T+ + PI+ I+ +DI N++NEL+ Sbjct: 56 MKFKDFVALYMKDADPRLRETTLANKHYLFNKKVLPYFGEMPINAIKPTDIRNWQNELI- 114 Query: 141 GETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV-KKLQRNRIKP 199 + R N +G + + L + FA + + P ++N + Sbjct: 115 ------NYRRPNGRGYSPTYLRTINNQLTAAFNFAVKFYGLRENPCHKAGTMGKKNADEM 168 Query: 200 DPLSKTEFNALMESEKGQS--QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT 257 + EF +++ + + ++ Y+GLR GEL AL ED+D ++ I++V +N Sbjct: 169 LFWTNEEFKVFIKAMESRPVGYTVFMVMYYTGLRVGELLALTPEDIDFDRHIISVNKNYQ 228 Query: 258 I---LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKL 314 D PPKT AG R V + + LK+ + ++ F Sbjct: 229 HLNGKDYIYPPKTEAGYREVVMPKVLESCLKDYLAKLYDVQPTDRIF------------- 275 Query: 315 HFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAF 374 Y +G + +G ++ + RHT A L+ G P Sbjct: 276 ---------------PYDRGWVGRQMKYGCDHSGTQKIRVHDVRHTHASLLIDMGCTPLL 320 Query: 375 IASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 +A ++GHE Q E Y + E L+A Sbjct: 321 VAERLGHERVQTTMETYSHLYPNKQSEVANQLDAM 355 >UniRef50_C3C7W0 Phage integrase n=2 Tax=Bacillus thuringiensis RepID=C3C7W0_BACTU Length = 398 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 70/427 (16%), Positives = 153/427 (35%), Gaps = 64/427 (14%) Query: 9 EIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQS 68 +G ++ F RGK+ ++ + T + EI+ G F+ + Sbjct: 3 RYKGGFLMATFRKRGKKWEYRIRYVDKTTGKKR-----------EISKGGFDSKKEATFH 51 Query: 69 STGAK------MVTTRVIKTFGELCDIWTKIKET-ELTTNTMKKTKSQLKTLRIIICEST 121 + + M E W + + ++ +T K+ + I ++ Sbjct: 52 ANERERQLFHGMAADSKKTLLSEYLIEWLETYKKGKVGQSTYILHKNNINNHIIPYFQNI 111 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 ++ + + + N L++ KG + RTV+ + + + ++ A + Sbjct: 112 KLADMNKIEYQKFINHLIN-------------KGYSKRTVEIIHSTMSNSIKRAIDLEMV 158 Query: 182 STKPFEGV----KKLQRNRIKPDPLSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGE 234 + ++ K + L+K + + L+ + L V +G+R GE Sbjct: 159 YKDFTNRILIAADHFNQHSKKENYLTKEQVSKLLNTAHKDKMIYYVLIYTLVETGMRKGE 218 Query: 235 LAALAWE-DVDLEKGIVNVRRNLTI-----------LDMFGPPKTNAGIRTVTLLQPALE 282 AL W+ ++DL+ ++++ R + D+ G KT +R++T+ + Sbjct: 219 ATALEWDTNIDLDNKMIHIDRTINYHAYTPIGQKNSKDLIGKTKTYDSVRSITISDRLVS 278 Query: 283 ALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNA 342 LK + Y + + FVF S+L + Sbjct: 279 VLKTFKTYQNECKLKLGARYDKTF--------DFVFTTT------GKPIPKSTLKNVLDR 324 Query: 343 AVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQ 402 +K A + + + RHT A LL AG +I ++GH++ ++ IY + + + Sbjct: 325 ILKNAELPQIGVHGLRHTHAVLLLEAGVEMKYIQERLGHKSIEITSNIYSHVTPKIIENE 384 Query: 403 IAMLNAR 409 + A Sbjct: 385 QSKYEAY 391 >UniRef50_Q831G3 Site-specific recombinase, phage integrase family n=1 Tax=Enterococcus faecalis RepID=Q831G3_ENTFA Length = 379 Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 66/415 (15%), Positives = 145/415 (34%), Gaps = 55/415 (13%) Query: 8 VEIRGRYIRIWFM-----FRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 + + + GK+ R+ L T S K+A + + YL Sbjct: 2 ITKKENGYFVDVSLGIDPISGKQRRKRL-----TVSTKKEAQQIESK-----------YL 45 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 R + ++ +TT T ++ +++ + L + + + K ++T Sbjct: 46 RLYHENK-----LTTNSDLTLKDIYEVYEEKYTQNLKPSYKQTQERIFKNYIEPYFKNTQ 100 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFIS 182 I I+ I +++ LL + K+ + +T++ I L L A + G Sbjct: 101 IKLIKKQQIYDFQQFLLTSKP-------KRKETLSNKTINMIIIHLQKLFNVAMKEGLSY 153 Query: 183 TKPFEGVKKLQRNRIKPDPLSKTEFNALMESE---KGQSQNLWKFAVYSGLRHGELAALA 239 P + KL+ + + D + EF + K + ++FA ++G+R GE+ AL Sbjct: 154 ENPCNQIDKLKVQKKEIDFWTLDEFTTFISHIDKNKPFLKVFYQFAFFTGMRAGEMIALT 213 Query: 240 WEDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 W D+D V + ++ +++ + PKT + R +T+ LK+ ++ Sbjct: 214 WSDIDFYNQTVRINKSAKLINGNYVTTTPKTESSNRYITINSKITAMLKKWQEIQPK--- 270 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI--RRRNP 354 + + VF + + S + + + + + Sbjct: 271 -----LLIDNFQNIDSDKLLVFQYS------EKHPSSDYYSKQIKKIIVKNNLNLKPIRL 319 Query: 355 YHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + RH+ L+ I ++GH + + YG + + Sbjct: 320 HDFRHSHVALLIHNNEKNTTIKERLGHSSITTTIDTYGHLYPNSQKSMSDKFDNY 374 >UniRef50_C7TCR7 Integrase n=4 Tax=Lactobacillus RepID=C7TCR7_LACRG Length = 389 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 63/411 (15%), Positives = 126/411 (30%), Gaps = 43/411 (10%) Query: 14 YIRIWFMFRGKRCRET--LKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTG 71 IR + + GKR + G + K L + + Sbjct: 3 SIRSYKLDSGKRRWKVSVYVGIDPKTGRKKYVVKGGKLTRQDAIKAGRNLEKAVQNGELT 62 Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 +V + F ++ + W K + + ++ KT+ + I I D+ Sbjct: 63 VAPNPVKVARKFKDVYEEWLKSYKLTVRESSWSKTRDCFNLHILPDLGDMYIDKITPQDV 122 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 N+ + Y + +L +A +I+ P + Sbjct: 123 QTAVNKWFKQ---------------SPVAFKRYFVHINRILTYAELRDYITHNPARRIIL 167 Query: 192 LQRNRI---KPDPLSKTEFNALMESEKGQS----QNLWKFAVYSGLRHGELAALAWEDVD 244 + D + + L++ Y+GLR GE AL WED+D Sbjct: 168 PRVQDKIGSTNDFWDRRQLEVFFNCINPDRELYKYVLFRILAYAGLRIGEAMALEWEDID 227 Query: 245 LEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 +K +++V + +++ + PPKT A R V + + LK + Sbjct: 228 FKKRLISVNKTVSLGVHGKLIVNPPKTRASRRDVPVDSETINWLKRWRIEQPDY------ 281 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRRNPYHTRH 359 +F + N + V + ++ + + + R Sbjct: 282 ---VYGYVRLSTHHQLLFTTKTGNR-----FRVDKPRMWLSTIIRNNNLAPVISLHKFRK 333 Query: 360 TFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 ++ LL AG + + +GH ++ +IY + E L L Sbjct: 334 SYISNLLIAGVAVSTVQKMVGHTDPRITLQIYARVHQEQEVEAAEKLAEYL 384 >UniRef50_Q03L48 Integrase n=30 Tax=Streptococcus RepID=Q03L48_STRTD Length = 388 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 65/391 (16%), Positives = 126/391 (32%), Gaps = 44/391 (11%) Query: 33 WEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTK 92 K + + + +F++ + G+ I+T+ EL W Sbjct: 26 ITGKKVTTKVTARTKKELKTKAQQAQFDFK------ANGSTRYKEVAIETYEELAISWWD 79 Query: 93 IKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSN 152 + + NT + K L + + + + I + N+L + + Sbjct: 80 SYKNTVKANTKRAQKGLLNNHVLPLFGEFKLDKLTTPLIQSMMNKLANSTNTGEAGAYLH 139 Query: 153 KKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL----QRNRIKPDPLSKTEFN 208 AL +L++ I T P V + + K + E Sbjct: 140 YD--------KIHALNKRILQYGVVLQVIPTNPANNVVLPRNTQKDKKAKVKHFNNDELK 191 Query: 209 ALMESEK---------GQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 + L+KF + +G R E AL+W D+DL+ +V++ + L Sbjct: 192 QFLTYLDSLDNSKYKNYYDITLYKFLLATGCRINEALALSWSDIDLDNSVVHITKTLNYE 251 Query: 260 DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM 319 PK+ +G R + + + + +K + VF Sbjct: 252 MKLNSPKSKSGYRDIDIDKQTVTMMKRYQHKQTQEAWKLG------------RTETVVFS 299 Query: 320 PRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 + Y + +L +R KRAG+ + RHT A LL +G + ++ Sbjct: 300 DFI-----HEYPNSRTLQSRLGTHFKRAGVTNIGFHGFRHTHASLLLNSGIPYKELQHRL 354 Query: 380 GHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 GH M +IY + + ++ L Sbjct: 355 GHSKLSMTMDIYSHLSKENAKKAVSFYEVAL 385 >UniRef50_C3K9Z5 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K9Z5_PSEFS Length = 410 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 101/414 (24%), Positives = 162/414 (39%), Gaps = 49/414 (11%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE--- 60 LP G+++ IRI FM+ G R ETL + T IK A + + I G + Sbjct: 21 LPAGMDLHHGSIRIRFMWNGSRRSETLP-YPPTQKGIKSASQVVDQVKGLIKLGLLDDDK 79 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Y FP SS A FGE +W + E+ T K L + Sbjct: 80 YAELFPSSSNVAG-----GKINFGEYAQLWLDSR--EVVGGTKANYKGALNRYWMPGLAL 132 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 I I + + + ++ N I+ L ++L A Sbjct: 133 VRIDLITTTLLRRVMA---------------ASEWKSPGVKRNAISKLSTILNSAMSEEL 177 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-------SQNLWKFAVYSGLRHG 233 I P ++ +R++ + DP + E N ++ ++F ++G+R Sbjct: 178 IPKNPAAILELPKRSKKEIDPFTLEEANLIIAKMYEHDHWPSTIYAAFFEFVFFTGMRLS 237 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 E A+ W++VD +K +V R + + ++ KT G R V L AL AL + Sbjct: 238 EALAMRWDEVDEQKKTAHVCRGVALGEVVERTKT-GGDRFVLLNDRALHALDFAKEYAER 296 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRN 353 +K + Y + +V S L +W +K IRRR Sbjct: 297 RKKGKGKVLETPYIFPPSKNAAYVRQT-------------SDLHKQWVPTLKALNIRRRP 343 Query: 354 PYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND-EQIAML 406 PY+ RHT+A + +G NPAFI+ Q+GH QM+ Y WI+ +D ++ L Sbjct: 344 PYNCRHTYATICIMSGMNPAFISQQLGHS-VQMLLSTYARWINSSSDWSEMQKL 396 >UniRef50_C9A1I5 Phage integrase n=20 Tax=Enterococcus RepID=C9A1I5_ENTGA Length = 383 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 59/407 (14%), Positives = 124/407 (30%), Gaps = 38/407 (9%) Query: 14 YIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAK 73 + KR KK R + + L ++ K Sbjct: 3 KFEQYKDKNNKRKWLFSGYVATDPITEKKIVTTRKGFDTKAEA----RLEFDKLKASILK 58 Query: 74 MVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 + TF EL D W + + ++T+ + ++ + + I S Sbjct: 59 GSKKKRTITFQELYDDWLEQHRKSVKSSTVATNRRFIEGHVLPKFGKLKLDQITVSFCQK 118 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 NE Y ++ + + + P + + Sbjct: 119 CVNEWHDKYKQY----------------HYIRRATAQVMNYGVSMELMESNPMKKTILPR 162 Query: 194 RNR--IKPDPLSKTEFNALMESEK----GQSQNLWKFAVYSGLRHGELAALAWEDVDLEK 247 + KP+ SK E + M K + ++ +G+R E L +D+++ Sbjct: 163 KKEEEKKPNFYSKDELHEFMTFVKTLDNYKYYAFFRLLAITGMRKSEALGLYIKDLNIFN 222 Query: 248 GIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 + + + + I + + PKT RT++L + L++ + + Sbjct: 223 KTLTIGKTIAIDEYDQVVLQTPKTKNSYRTISLDDETIRILQKWFSIQKEDYFKLGFNTS 282 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFAC 363 + + ++ P+V N Y A + ++R +P+ RHT Sbjct: 283 KAKQLMFSNMSNDLYYPQVINDWLDWIYD--------KAEKEGLTLKRISPHGFRHTACS 334 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 + AGA + ++GH+ + IY + L L Sbjct: 335 LMFEAGATINEVQKRLGHKDVKTTMNIYSHVTPQQAENTSQKLANYL 381 >UniRef50_C0X6I8 Phage integrase family site specific recombinase n=17 Tax=Enterococcus faecalis RepID=C0X6I8_ENTFA Length = 389 Score = 276 bits (708), Expect = 8e-73, Method: Composition-based stats. Identities = 69/423 (16%), Positives = 145/423 (34%), Gaps = 51/423 (12%) Query: 1 MSKLPTGVEIRGRYIRIWFMFR---GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSG 57 M +E RG +++ ++ GK ++ N K+A +R + E+ Sbjct: 1 MKLRANIIEKRG-TLQVIVSYKDSNGKIRQKWKDTKLKKKGNKKRAEKIRDEFLLELE-- 57 Query: 58 EFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIII 117 S + F + + ++ + ++ NT K + Sbjct: 58 ----------SQLAMECECANPDLLFYDYLLNYLEVSKKQVAFNTYVGYKHYVHNRIYKF 107 Query: 118 C--ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFA 175 + ++ ++ + ++ +L+ + T TV +Y A + L+ A Sbjct: 108 FYPKKIKLNRLKPYHLQDFYQYMLNDD-------------CTANTVIHYHAFIRKALQEA 154 Query: 176 YQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFA-VYSGLRHGE 234 + IST + V+K ++ + ++ E L++ + L + GLR E Sbjct: 155 VITELISTNVADKVRKPKKKQFVSQVYNQHEILKLLDILSEEKLYLVVLLTAFYGLRRSE 214 Query: 235 LAALAWEDVDLEKGIVNVRR-------NLTILDMFGPPKTNAGIRTVTLLQPALEALKEQ 287 + L W +D + + N++ L K ++ RT+ L++ AL Q Sbjct: 215 VLGLKWSAIDFFNKKIVINHVIIENPENMSQLIKKDQTKNSSSYRTLPLVETIERALVNQ 274 Query: 288 YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRA 347 K +R Y E +VF + + R + +K+ Sbjct: 275 AKWQQDNRILLGDDYILE-------DNEYVF-----TMEDGRLMKPQYVTHRLSKLIKKN 322 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 G+++ + RH+ A +L +G N I +GH + +Y + D L Sbjct: 323 GLKKIRFHDLRHSNASIMLDSGQNMKSIQEWLGHASYSTTANLYTHLTAGVKDRAAEALE 382 Query: 408 ARL 410 Sbjct: 383 NAF 385 >UniRef50_UPI0001973B6A integrase family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973B6A Length = 408 Score = 276 bits (707), Expect = 9e-73, Method: Composition-based stats. Identities = 81/399 (20%), Positives = 133/399 (33%), Gaps = 53/399 (13%) Query: 31 KGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIW 90 + + + + + ++N ++ V T D W Sbjct: 25 RYVDKFGKRKELYDRNLSSLKRKLNEAKYN---------DAIGNVILDDSLTLSVWFDNW 75 Query: 91 TKIKETEL-TTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNP 149 +I + + NT K K + + I I EL Sbjct: 76 LEIYKYNVIRDNTRVYYKQVFKKHIEPLLGHKRLKDITQLHIRALLKEL----------- 124 Query: 150 RSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNA 209 +K+G +T + +L + A + P +G++ + N+ S E Sbjct: 125 --DKQGLQFQTQNKVRVMLLDMYNKAILDNYAVRNPAKGIRLPKHNKRNKRVFSVEEQID 182 Query: 210 LMESEKGQSQ-NLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILD-------- 260 + KG NL+ AV +GLR GEL AL W+D+DLEK +NV + L Sbjct: 183 FFDCCKGTFYDNLFTVAVNTGLRQGELCALTWDDIDLEKKEINVEKTLLYQKLEGDTGKT 242 Query: 261 -MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM 319 PPKT R V + + ALK+Q + R+ + EK + +F Sbjct: 243 FHINPPKTKTSNRKVPINKQCEIALKKQLIQRNN-------IISRQSAKPEKGFENLLFT 295 Query: 320 PRVCNGKQKPYYSVSSLGARWNAAVKRAG--------IRRRNPYHTRHTFACWLLTAGAN 371 + L V P+ RHTFA AG + Sbjct: 296 TKYAT-----PICDQILIDAIKKIVNEINSVRSEIEQFEMFTPHCFRHTFATRCFEAGIS 350 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 P I + +GH T QM ++Y ++ I+ L+ Sbjct: 351 PKVIQTYLGHSTLQMTMDLYTSVFKHCEEKAISRLSEYF 389 >UniRef50_C4TVA5 Bacteriophage integrase n=3 Tax=Enterobacteriaceae RepID=C4TVA5_YERKR Length = 396 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 111/411 (27%), Positives = 181/411 (44%), Gaps = 56/411 (13%) Query: 2 SKLPTGVEIR----GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSG 57 +KLP G+ +R G+ I I F ++G +CRE L E+T NIK A L I + I G Sbjct: 7 AKLPRGITVRSHKTGQTINITFTYKGVKCREPLSNIEVTPKNIKYAERLLGEIHNRIERG 66 Query: 58 EFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKE-TELTTNTMKKTKSQLKTLRII 116 F Y +FP+S + K + D + I E +L+ T+ K L + Sbjct: 67 TFNYADQFPRSVRLNVFGNNQSSKHIKKYLDEYISICESRKLSPATIAGYKKCLSA--LS 124 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 +S + + + N+ + ++T+ N ++ L S + A Sbjct: 125 SLHEVNVSDLTPAIVKNWI----------------QGQKVALKTIRNRLSFLGSAIDEAV 168 Query: 177 QSGFISTKPFEGVKKLQRN--------RIKPDPLSKTEFNALM-ESEKGQSQNLWKFAVY 227 G + P V + DPLS E A++ + Q +NL++FA++ Sbjct: 169 TDGLLPANPVSLVSASRYQGEDVRSESEYVVDPLSPDEAKAILSTAMNAQWENLFRFALH 228 Query: 228 SGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQ 287 +G+R EL A+ W+D+DL +V ++ + KT AG R + L AL A+K Q Sbjct: 229 TGMRSSELCAIRWQDLDLVGNTAHVI-TASVEGVIKGTKTKAGRRKIELDSDALLAVKNQ 287 Query: 288 YKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKR 346 T K +VF N + + ++ + W +KR Sbjct: 288 KPFTFMLNK-------------------YVFHDPKTN---EAWTGADAIRKKAWIPTLKR 325 Query: 347 AGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 AG+R RNPY TRHTFA ++ GAN ++A QMGH+ +M++ YG ++ + Sbjct: 326 AGVRYRNPYQTRHTFATMHISQGANLFWLAGQMGHKGPEMLFRHYGSFLKE 376 >UniRef50_B9KYK7 Putative integrase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYK7_THERP Length = 359 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 67/409 (16%), Positives = 119/409 (29%), Gaps = 62/409 (15%) Query: 9 EIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQS 68 + G+R + A + ++ Sbjct: 6 RRKSGLFEARLQRDGRRFSVY-------GRTETEVRQKLAELERKL-------------- 44 Query: 69 STGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRY 128 T ELC+ W + T + L+ + +S + Sbjct: 45 --AIDQAPPVGRVTVRELCERWLATERKRWKPKTYYDYRWHLEHHVYPVLGRVQLSKLTP 102 Query: 129 SDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEG 188 + + + L + R+ + LL + GF+ P + Sbjct: 103 DRLQRFFDSL------------------SGRSANLTFRLLHRCFVVGIRWGFLGQNPCDR 144 Query: 189 VKKLQRNRIKPDPLSKTEFNALMESE---KGQSQNLWKFAVYSGLRHGELAALAWEDVDL 245 V + L L ++ GLR GE+ AL W D+DL Sbjct: 145 VVPPAYQAPPIELPDADALARLFRYCLESDDPYAGLVGLSLLCGLRRGEITALRWSDIDL 204 Query: 246 EKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 + G ++V R+ + + PKT AG RT+ + + + L+ Q L + + Sbjct: 205 QTGQLSVVRSGQWIAGRWVETEPKTRAGRRTIYVGEQGIRLLRRQKALVAQLKLQAGPAW 264 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 Q+ VF G S S + A K +G+ + RH A Sbjct: 265 ---------QEHGLVFP-----GPNGQPLSPSRVAAAVQRICKASGVPPLRHHSLRHASA 310 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 L AG ++ Q+GH + +Y I D + L+ Sbjct: 311 SLALLAGVPLPEVSRQLGHANVSITARVYSHCISDG-RRVTEAIERVLA 358 >UniRef50_B2THD3 Site-specific recombinase, phage integrase family n=3 Tax=Clostridium RepID=B2THD3_CLOBB Length = 384 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 69/400 (17%), Positives = 146/400 (36%), Gaps = 46/400 (11%) Query: 20 MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRV 79 GK+ + +G+ K A + + + G + T Sbjct: 20 YENGKQVKTRKQGF----KTKKDAEIWVTDTLGKKHKG---------------YIALTNS 60 Query: 80 IKTFGELCDIWTKIKET-ELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNEL 138 F + + W + ++ NT ++ + + + +S + S I ++ N+L Sbjct: 61 NILFKDYINKWFNEYKVLNVSINTKNDYIYRINAHVVPMIGNYKLSELSTSIIQDFYNKL 120 Query: 139 LHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIK 198 + ++KG + ++ L++A +S I P + ++K + + + Sbjct: 121 I------------SEKGMKPVSAKKVYDIVNGCLKYAKKSKLIYDLPTD-IEKQKLVKPE 167 Query: 199 PDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLT 257 + +K E + ++ + V +GLR GEL L W DV+LE G + V + Sbjct: 168 IEFWTKKEIDFFLDKINDLYLYSPVFLDVLTGLRVGELCGLRWCDVNLESGYIEVNSQVI 227 Query: 258 ILDMFGPP------KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 + KT+ R +++ ++ LK + + +++ RE Sbjct: 228 QDRINKELIFSSILKTSTSHRNISIPPVLIDFLKAMKED-NNALENDFVILSREGLMCNP 286 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG-IRRRNPYHTRHTFACWLLTAGA 370 + L F V K+ S+ + K +++ + + RHT A L+ G Sbjct: 287 RNLSMNFTKTVAKYKK----SIDDIEKENKEVPKDYMQLKQISFHGLRHTHATLLIFNGE 342 Query: 371 NPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 N ++ ++GH + Y +DDM +LN Sbjct: 343 NIKVVSDRLGHRDISITLNTYTHIMDDMKSNTATLLNNLF 382 >UniRef50_Q30S15 Phage integrase n=2 Tax=Campylobacterales RepID=Q30S15_SULDN Length = 393 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 77/407 (18%), Positives = 161/407 (39%), Gaps = 61/407 (14%) Query: 13 RYIRIWFMF-RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTG 71 + + F G+R R T K T N+K ++ ++ +I G Sbjct: 21 GHWYLDFYLPSGERQRGTTK-LRATAENLKV---IKRQVIPDIYEGL---------GKEP 67 Query: 72 AKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDI 131 + T + + + ++++T++ +T+++ + I +I Sbjct: 68 IGIEEEAKTWTLQDFAEEFFELQKTQIRPHTLERNIMHYNNHIAPYFGKRELGRITPLEI 127 Query: 132 LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKK 191 ++N+LL TV + ++L S+ A + + P E V Sbjct: 128 ERWQNQLLQKYKHL--------------TVQKFRSILFSIYDKALHNDLVLKNPLEKVTA 173 Query: 192 LQRNR----IKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEK 247 + + +P ++ E N ++E G +N K +G+R GE+ AL W D+D EK Sbjct: 174 PKVQNNIKIEEINPFTEKELNQIIEHANGYMKNFIKLMAATGMRPGEIIALKWSDIDFEK 233 Query: 248 GIVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFY 302 + V R + G K + R V +L ++L Q +LT Sbjct: 234 RTIKVERTRLRAKKGEDIVDGLTKIKSSNRFVDMLNATHDSLMAQLELT----------- 282 Query: 303 HREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 ++F+ N P+Y+ +G + +K++G++ R Y+ RHTFA Sbjct: 283 ---------SNSEYIFL----NQSNMPFYNHDIIGVNFRKILKQSGVKARPLYNLRHTFA 329 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 +++ GA+ +++ +GH+ + +IY +I + ++ ++ + Sbjct: 330 SQMISKGADITWVSKMLGHKDVSITLKIYTKFIQEDDETRLKKIAQM 376 >UniRef50_B2UXR9 Phage integrase n=3 Tax=Clostridium RepID=B2UXR9_CLOBA Length = 389 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 82/433 (18%), Positives = 151/433 (34%), Gaps = 73/433 (16%) Query: 4 LPTGVEIR---GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 +P + + ++ R R+ + T + +I +E Sbjct: 1 MPKSIYRKRVINGTEYFFYRLRHDNLRKPKDLYARTEK----------ELKAKIKKLNYE 50 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRII-IC 118 + +FG W IK E+ +T K ++ + Sbjct: 51 LDHNIQSNKN-----------SFGVFFSEWLFDIKFMEIKPSTKIKYETVYRNHIKNSEI 99 Query: 119 ESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS 178 I + DI Y N L+ KKG++ V L+ +++AY + Sbjct: 100 SDIKIKELTSKDIQIYYNNLI-------------KKGKSTTLVKTIHKLIAPCIKYAYNN 146 Query: 179 GFISTKPFEGVKKLQRNRIK-------PDPLSKTEFNALMESEKG-QSQNLWKFAVYSGL 230 FI + + P + E +++ KG + + L+ A+ SGL Sbjct: 147 DFIIKDFTGSLIIPKETEKDKLNKESSVIPFTLEEQKEFIKAIKGNKFEALFITALNSGL 206 Query: 231 RHGELAALAWEDVDLEKGIVNVRRNLTILDMF------------GPPKTNAGIRTVTLLQ 278 R GEL AL W D++L++ +NV +NL ++ PKT G R V++ Sbjct: 207 REGELLALTWNDINLKEKYINVNKNLGVVTEVSKDGRGVSKLEVQTPKTRKGKRQVSIPN 266 Query: 279 PALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA 338 + LKE K +R Y + +F N Y + + Sbjct: 267 FLITVLKEYKKQQSKNRLKLANKYTN---------NNLIFCDEYGN-----YLNRDKVTY 312 Query: 339 RWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 ++ +K + I+ R + RHT+A L G + +GH + Y +DDM Sbjct: 313 QYKKLLKESKIKTRKFHDLRHTYATRLFELGEQARTVQELLGHSDVSVTLNTYTHVLDDM 372 Query: 399 NDEQIAMLNARLS 411 ++ ++ L+ + Sbjct: 373 KEKAVSKLDNLFN 385 >UniRef50_A1UH53 Phage integrase family protein n=3 Tax=root RepID=A1UH53_MYCSK Length = 379 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 74/410 (18%), Positives = 126/410 (30%), Gaps = 42/410 (10%) Query: 9 EIR-GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 R I G R + + K + + + L++ Sbjct: 2 RKRANGEGNIRQRANG-RWEGRVSYVDPVTDGRKSVS-----VYAATAAECRKELKKVRD 55 Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKI--KETELTTNTMKKTKSQLKTLRI-IICESTPIS 124 G T W ++ T + + + Sbjct: 56 RIEGGAPAKDAPN-TVSSWLKQWRASSLAASDRKETTKSLYATLSRKHLEGARIGDKRLD 114 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTK 184 ++ SD+ +L K + TV +L L A + G ++ Sbjct: 115 RLKPSDVELLIVQL-------------RGKNLSDSTVRQVYTVLRQALDVAVRDGLLAAN 161 Query: 185 PFEGVKKLQRNRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHGELAALAWEDV 243 P VK+ R + L + L+++ KG + +GLR GE+A L W DV Sbjct: 162 PASKVKRPGVARKEAKYLPAADVARLLDAAKGLRYYLGVVLMATTGLRRGEVAGLLWSDV 221 Query: 244 DLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 DLEKG + VR L+ +D + PKT+ R V L + LK R + Sbjct: 222 DLEKGELTVRHTLSRVDGKLVLTEPKTDRSRRRVPLHAGVVAQLKMHRTQQLQERLAAGD 281 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 + V + +L A + GI + RH+ Sbjct: 282 QWRD--------------TGAVLATEFGTLLDPRNLLRTVEIAAAKVGIEDVGAHTMRHS 327 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A L +G + A +GH + + ++YG D+ + L L Sbjct: 328 AAVAWLESGVHIKAAADLLGHSSIAITGDLYGHTSDETARAAVDGLGTAL 377 >UniRef50_Q1BC50 Phage integrase n=4 Tax=Mycobacterium RepID=Q1BC50_MYCSS Length = 442 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 78/459 (16%), Positives = 145/459 (31%), Gaps = 89/459 (19%) Query: 8 VEIRGRYIRIWFMFRGK-----RCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 V RGR F K R KG T K+A + E + G Sbjct: 5 VYQRGRTWTYRFRAAEKDPSTGRYPTISKGGFSTE---KEAWKACRDAMREADEGRVV-- 59 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTP 122 +T + D W E L T + K K+ + + Sbjct: 60 --------------RPSTRTVTQFLDEWFTAVEASLDATTWQNWKDYAKSYVVPHIGNVK 105 Query: 123 ISHIRYSDILNYRNELLHGETLYLDN---------------------------------- 148 + + ++L +LL + D Sbjct: 106 LQQLDEPELLRLYAKLLTEGRIKQDRNYEMYCYWRRHAIDGESPAPREVADACGTTIHAA 165 Query: 149 ------------PRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 P G +TV N A++ + A + + P V+ +R+R Sbjct: 166 RAAVRRYKSGILPTKMDPGLAPKTVRNIHAMIHRAMADAVAWKYKAHNPAANVRPPKRSR 225 Query: 197 IKPDPLSKTEFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 + ++ + + + + +L+ + +G+R G++ L W DVDL+ V V N Sbjct: 226 SRRTVWNQEDIQKFLRAVSHDRFASLFLLELTTGIRRGQICGLRWHDVDLDVREVTVHDN 285 Query: 256 LTIL----DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEK 311 ++ KT +T+ + + AL++ + R YH Sbjct: 286 RVVVAGHARDKAGGKTRNADQTIAIDRVTAAALRKWREHQNEERAFFGADYH-------- 337 Query: 312 QKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGAN 371 ++VF + S+ R++ AG+ R + RH++A L AG N Sbjct: 338 -PGNYVFTF-----EDGRPPHPDSIRQRFDRLAAVAGLPRITFHDLRHSYATAALKAGVN 391 Query: 372 PAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 P ++ ++GH + Y + + + + A L Sbjct: 392 PKIVSERIGHADVGFFLQTYAHVLKNDDRDAAEQAAAFL 430 >UniRef50_Q7A4J3 Int protein n=24 Tax=Bacilli RepID=Q7A4J3_STAAN Length = 390 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 72/432 (16%), Positives = 142/432 (32%), Gaps = 78/432 (18%) Query: 6 TGVEIRGRYIRIWFMF-----RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 E RG R GK + G+ A + ++ ++ +G++ Sbjct: 2 ASYEKRGNTWRYRISLGKDAETGKYKYISNSGF----KRKSDAKHHAEMVERQLRNGDY- 56 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 TF ++ D W E+ ++++ + + I ++ Sbjct: 57 ---------------IAPSTSTFKQVADDWISQYANEVKVSSVRAREKAI-HHAIERFKN 100 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 PI I+ D + N++ + VD+ + + ++AY Sbjct: 101 KPIQTIKKHDYQRFVNDISIQ--------------YSKNYVDSIVTSTNMIFKYAYDMKL 146 Query: 181 ISTKPFEGVKKLQRN---------RIKPDPLSKTEFNALMESEKGQSQN-----LWKFAV 226 I P EG+K+ ++ I L K E +E K ++ Sbjct: 147 IRILPSEGIKRPKKKVSVEELEDTEIHKKFLEKDELFQFLEIAKNHHSPQNSFEVFYTLA 206 Query: 227 YSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFG------PPKTNAGIRTVTLLQPA 280 Y+G+R GEL AL W D+D E +N+ + + PKT + I +++ Sbjct: 207 YTGMRAGELLALKWSDIDFENNTINITKTYYNPNNNKKQYQILTPKTESSIGKISVDPHV 266 Query: 281 LEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARW 340 ++ LK K+E+ +V V + L Sbjct: 267 IKLLKNYKVDVQDTWKNEL----------------YVDNNFVFTDVNGYPLVIKKLQLWI 310 Query: 341 NAAVKRAGI--RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDM 398 A +K+ I ++ + + RHT L+ AG + I ++ H+ IY + Sbjct: 311 KAILKKTNITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTMNIYAKITNSY 370 Query: 399 NDEQIAMLNARL 410 + + + Sbjct: 371 KKDASQKFSKLM 382 >UniRef50_B3WDC1 Integrase n=3 Tax=root RepID=B3WDC1_LACCB Length = 394 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 74/405 (18%), Positives = 130/405 (32%), Gaps = 56/405 (13%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK + +G+ K A L EI G Y Sbjct: 29 GKEIKIHRRGFP----TEKIAQQEATLAEAEIIKGHSHYQTE---------------RIL 69 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 + + W + + +M + LK I ++ + + + L + Sbjct: 70 MADYLNQWITKLKVNVKEGSMIIYRYNLKKYIIPKIGDIRLAKYTLKEHQEFISSLFND- 128 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVK---KLQRNRIKP 199 G ++ TV L + L+ A G+I+ P GV+ + N K Sbjct: 129 ------------GLSLNTVKLINGTLHNALKKAVAIGYITKNPTVGVEFSAYAKDNSKKL 176 Query: 200 DPLSKTEFNALMESEKGQSQNL----WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRN 255 +K + + +E+ + + + + + GLR GE AL W D+D K ++V Sbjct: 177 HFWTKDQVGSFIEAAEEDKEPMWLSFFVTLIDCGLRVGEAMALRWSDIDFSKNTLSVNAT 236 Query: 256 LTILDMFGP---------PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 G PKT + RT + + L++QY+ H + + + Sbjct: 237 RIYRAETGSNAGKIALDRPKTLSSKRTEYMTARVNDLLQQQYERHFSHGNVQGFRFSTSH 296 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 FVF + K + +N RAG+ + RHT A + Sbjct: 297 N------NDFVFTYS-SDAKFGQPLRSRATTGAFNRITNRAGLPHIRIHDLRHTHAVLMR 349 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 AG + I +GH+ +IY E L+ Sbjct: 350 EAGLSLDDIKDDLGHKDISTT-QIYAEISPAKKKENHQQFEKYLN 393 >UniRef50_B1J5J4 Integrase family protein n=4 Tax=Pseudomonas RepID=B1J5J4_PSEPW Length = 396 Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats. Identities = 111/415 (26%), Positives = 167/415 (40%), Gaps = 53/415 (12%) Query: 4 LPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEF---E 60 LP GVE+ GR IRI F + KRC ETL T I A +LRA + G + Sbjct: 8 LPAGVELVGRSIRIRFTWNKKRCCETLP-LPQTPKGIAAAASLRAQVKGLDKLGALTAEK 66 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 Y FP T + +V + F + W ++ T K +S L+ + Sbjct: 67 YAELFPN--TRSVVVHEQTTPIFFDYAQDWLNS--LQIVEGTRKNYRSALQVYWVPYLAD 122 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 PI I + N++ K + + LL S+ + A Sbjct: 123 KPIDTITSVLLRKIMNDI---------------KWTSPVRRKGVVGLLVSIFQQAVTDEL 167 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQ-------SQNLWKFAVYSGLRHG 233 I P + + + + DP +K E ++++ ++F Y+G+R G Sbjct: 168 IVRNPALSIPGAKVPKREVDPFTKEEADSIIAHLYETTSGMTAIYAAYFEFCFYTGMRPG 227 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGH 293 E+ AL W ++D NV R + KT R V L AL AL++ LT Sbjct: 228 EVMALRWSEIDRRVKTANVCRIQIRGVIQDRTKTKRS-RKVLLNDRALHALEKARPLTEA 286 Query: 294 HRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSV-SSLGARWNAAVKRAGIRRR 352 +VF P + + + +S W AA+++ GIRRR Sbjct: 287 R-------------------SDYVFAPSGTGDRSEMFIRSETSQKRYWLAALRKLGIRRR 327 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND-EQIAML 406 Y TRHT+A L AG NPAFIA+Q+GH Q++ Y WI+ ND ++ L Sbjct: 328 RMYDTRHTYATMCLMAGMNPAFIAAQLGHS-VQVLLSTYAKWINSPNDWAELDKL 381 >UniRef50_C2EIM6 Phage integrase n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EIM6_9LACO Length = 370 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 75/407 (18%), Positives = 138/407 (33%), Gaps = 65/407 (15%) Query: 14 YIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAK 73 I + F GK G+ + + GE+ S Sbjct: 19 RIYVGF-VDGKSKYVNRAGF----KTKTEVKKAYQEVKFAAYQGEYRQESNLDVSLR--- 70 Query: 74 MVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 TFG+L D W + + + ++ K L ++ + +I D N Sbjct: 71 --------TFGDLYDFWFEQYKNTVRGSSYYVIKKGLDKNVYPYLKNKQLKNITLIDCQN 122 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 N+LL + + +L++A I P V K + Sbjct: 123 LFNKLLKTNPGNYV-------------ILSIYT--KKILQYAVTLKLIPENPMNNVIKPR 167 Query: 194 RNRI--KPDPLSKTEFNALMESEKG---QSQNLWKFAVYSGLRHGELAALAWEDVDLEKG 248 + + SK E + K L++ YSG+R GEL AL D+D Sbjct: 168 EKKTYGSNNYYSKEELKTFLAYSKKEKFHVYVLFRLLAYSGMRIGELLALKVADIDFNTS 227 Query: 249 IVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 +++ + ++ PKT G R +++ + + K Sbjct: 228 QISITKTISSDADSRFELHKPKTTTGNRIISVDPDTINLVSTLIK--------------- 272 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW 364 +K+K F+F C+ YS ++ N +K+A +R+ + + RHT+ Sbjct: 273 -----DKKKDDFIFRFYGCS----KPYSPRTVALWKNKIIKKANLRKISLHGFRHTYTSL 323 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 L +G N I Q+GH +M +Y + N++ + + L+ Sbjct: 324 LFESGVNIKKIQKQLGHSKVEMTLNVYTHLSRN-NNDIGSKFDNYLN 369 >UniRef50_D0J3Y8 Phage integrase n=5 Tax=Burkholderiales RepID=D0J3Y8_COMTE Length = 394 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 111/414 (26%), Positives = 173/414 (41%), Gaps = 58/414 (14%) Query: 5 PTGVEIR----GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 P GV+IR G ++I F + G+ CRE L I S+I++A +LR I +I G F Sbjct: 11 PPGVKIRHLVSGDRLQIAFTWEGQECRELLPACAINKSSIQRAASLRDEIRRKIAEGGFS 70 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELT-----TNTMKKTKSQLKTLRI 115 Y FP S A ++ L ++ +T + R+ Sbjct: 71 YADYFPDSPRAA--APSKSNPLMETLLQKQLDTYARQVKNGQMSPSTYNGYAKAITGERM 128 Query: 116 IICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFA 175 + + S + ++ +E+ T + + N + L SL A Sbjct: 129 RRWHGLKVGEVLPSLLRDWVSEM----------------DCTSKAIRNMLTPLRSLFEDA 172 Query: 176 YQSGFISTKPFEGVKKLQRNRIKPD-------PLSKTEFNALMESEKGQSQNLWKFAVYS 228 I PFE + + R P S E A++++ + + + +F + Sbjct: 173 LNDELIDFNPFERIALSKLIRQTAKASDYVVTPFSAAEREAILKACRPDERPMLQFWFET 232 Query: 229 GLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQY 288 GLR GEL AL W +DLE+ I + N + + PKT AGIR V L AL AL+ Q Sbjct: 233 GLRPGELQALQWSHIDLERAIARIELN-QVAGVIKGPKTAAGIRDVELSAEALAALRAQR 291 Query: 289 KLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGAR-WNAAVKRA 347 + K +++ +P+ + + + W KRA Sbjct: 292 -------------------PISELKGERIWLNP---RTGEPWSTDAQIRKTLWQPVCKRA 329 Query: 348 GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDE 401 + RNPY RHT+A LLTAGANP ++ASQ+GHE +MV+ YG +I D + Sbjct: 330 EVEYRNPYQVRHTYASALLTAGANPWYVASQLGHEDVEMVFRTYGKFIRDDYQK 383 >UniRef50_Q65KE0 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KE0_BACLD Length = 381 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 74/422 (17%), Positives = 158/422 (37%), Gaps = 64/422 (15%) Query: 8 VEIRGRYIRIWFMFRG-------KRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 ++ + + +F++ G R ++ +G S++++A + ++ E++ Sbjct: 4 IKKDDKTGKYYFVYSGGVHPITGARIQKRRQGM----SSLREAKEVLKQVIIEVDK---- 55 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 K F + W + K+ L ++T+ + QL + + Sbjct: 56 -----------EKNSHNPNKSVFSTFAEKWFESKKVRLRSSTIVNYREQLDYNILPYLGT 104 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 I I + +Y N L N++ T+ ++ +L+ A + G Sbjct: 105 FKIKDITEEVLQHYINRL------------HNERKLAPATIRTAFGVVAEVLKKASRKGA 152 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEK-----GQSQNLWKFAVYSGLRHGEL 235 + V NRI +++ A +++ + +V +G+R GE+ Sbjct: 153 FDLAILDDVNLPPENRIS-KVWNESNVQAFLDARNRIVSLTRYFIGMVLSVITGMRMGEV 211 Query: 236 AALAWEDVDLEKGIVNVRRNLTILDMFG------PPKTNAGIRTVTLLQPALEALKEQYK 289 L W D+D EKG + +R+ L +D G KT AG RTV L + +E L E K Sbjct: 212 LGLRWSDIDFEKGYLTIRQTLAKIDDEGNYGLVPEVKTAAGFRTVHLPKFFIEYLIEHKK 271 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 + ++ ++ V K + ++ + + + + Sbjct: 272 MVQREKEILGE--------------DYIDYDLVVCTKHGKWVHPNNYRRAFTRLIAQLEL 317 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + P + RHT A +L++ G +P + ++GH + Y + M E + L+ Sbjct: 318 PKIPPKNLRHTHATYLISIGISPKIVQERLGHAHIKTTLGTYSHVLPSMQAELVGKLDDL 377 Query: 410 LS 411 ++ Sbjct: 378 VA 379 >UniRef50_C9N6T9 Integrase family protein n=7 Tax=Streptomyces RepID=C9N6T9_9ACTO Length = 382 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 66/410 (16%), Positives = 131/410 (31%), Gaps = 58/410 (14%) Query: 9 EIRGRYIRIWFMF---RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 + + G R R+T+ G S ++ R +V G Sbjct: 16 QRKDGRYEARVYVPQPDGTRKRKTVYG-----STWEECDTKRQELVLRDRQG-------- 62 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTPIS 124 + T E W + ++ +T+ K ++ ++ I + + + Sbjct: 63 --------IPTPTRSAKLSEWLPYWLEHYVQSRRKLSTLDKYEAHVRLYLIPMLGTKRLE 114 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTK 184 + +D+ + + +T +L + L A + I+ Sbjct: 115 TLSVADVRRFIARVQAAQTAATA--------------KEAHRVLRTALTAAVREELITRN 160 Query: 185 PFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDV 243 V+ + + + P S E + +E+ + + A+ GLR GEL L W DV Sbjct: 161 VASLVEPPRVKQREISPWSLKETLSFLEAARRDPLYAAFMLAICMGLRRGELVGLRWTDV 220 Query: 244 DLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT 300 DL+ +++VR PK+ R V + + L+ Sbjct: 221 DLDNRVLHVRHQTQRRRGTLYDDDPKSRR-RRVVPMPALCVAPLRWHRLKQRETFADTGV 279 Query: 301 FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHT 360 + + ++F R ++ + AG+R + RH Sbjct: 280 TWS---------ESGYIFATR-----NGRPVEPRNVYRSFTRVAAGAGLRVVRLHDARHG 325 Query: 361 FACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 A L AG P I +GH + ++Y + D E I+ ++ L Sbjct: 326 CATLLTAAGVAPRVIMEILGHSQISITMDVYTHVVHDTQREAISHMDRLL 375 >UniRef50_Q8R890 Tyrosine recombinase xerC-like n=5 Tax=Clostridia RepID=XERCL_THETN Length = 391 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 73/412 (17%), Positives = 138/412 (33%), Gaps = 48/412 (11%) Query: 19 FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTR 78 ++ GK + + N K +R + + + Sbjct: 7 YVKNGKEYY-RVTVTIGRDENGKL---IRKEFYGKTKKEAEAKKEEYLNGIR-NGLNVDF 61 Query: 79 VIKTFGELCDIWT-KIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNE 137 T G+L W ++ T K + + S++ + Sbjct: 62 QDVTLGDLMHTWLFEVVRMSRKPATFVKYEGHYRNYIKN------------SELYGMKIS 109 Query: 138 LLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPF--EGVKKL--- 192 ++ + + ++G++ +T+ L + +A G+++ P + + Sbjct: 110 IIKSIQIQRYYNKLYQQGKSSKTIKALNNFLKTFFNYAVDEGYLAKNPCTGKKIVIPGTP 169 Query: 193 -QRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 ++ + + S E + E+ KG + L+ A +GLR GEL L W D+D EK + Sbjct: 170 EEKIETEIETFSDEEIKKIKEALKGHRLKALFLLAFGTGLRQGELLGLKWTDIDFEKKEL 229 Query: 251 NVRR------------NLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSE 298 V+R N + PKT IRTV + + LKE + Sbjct: 230 RVQRMIKQVTIIDEKGNRKYKTIEQIPKTKNSIRTVPIPSSLIPMLKEHRNRQREEKLKA 289 Query: 299 ITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTR 358 + Y + + +VF + N S+L + + RAG+ R + R Sbjct: 290 GSVYLNDVEK------GYVFTTELGNT-----IDASNLLKTYKKILNRAGVPYRKFHAIR 338 Query: 359 HTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 HT+A L G ++ +GH + IY I + LN Sbjct: 339 HTYATKLFERGVPLKTVSELLGHSNISITANIYTHVIPKQKTNAVETLNDLF 390 >UniRef50_C0X7V2 Integrase family protein n=1 Tax=Enterococcus faecalis TX0104 RepID=C0X7V2_ENTFA Length = 376 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 83/413 (20%), Positives = 140/413 (33%), Gaps = 65/413 (15%) Query: 14 YIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAK 73 RI + GK + G+ + A + ++NSG Sbjct: 13 RYRIRYKENGKFREVSKSGF----RTKRDAQAAANELERKLNSGLVV------------- 55 Query: 74 MVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 E W K+KE ++ +T+ K ++ + I+ IR D +N Sbjct: 56 --QHNKDILVQEYLSSWIKLKEKQVKKSTLAKLNRAIRLHILPQFAYYKITEIRRIDCIN 113 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQS-GFISTKPFEGVKKL 192 + NE+ ++ + +Y + S L A I + P + +K Sbjct: 114 WVNEMCT--------------HLSIESAKSYCSTFNSALEDAVNDFKLIDSNPMKNIKYP 159 Query: 193 QRNRIK--PDPLSKTEFNALMESE----------KGQSQNLWKFAVYSGLRHGELAALAW 240 + + K K E L+ + Q L +GLR GE AL W Sbjct: 160 KTEKRKTAIQFFEKRELQNLLVTAESYKGTKPFINYQYYVLTFLLARTGLRLGEALALKW 219 Query: 241 EDVDLEKGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKS 297 EDV +K + V + L + PKT + RT+ L + +E LK H Sbjct: 220 EDVTEDK--LTVSKTLYRENNQNFITTPKTISSYRTIILDKKCIELLKSFKIKKIEHSLK 277 Query: 298 EITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHT 357 F + FVF + + + A + + +P+ Sbjct: 278 SNAFILNK---------EFVFTDSK-----GDFLKQCNYRTYFTTICTLADVPKLSPHAL 323 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RH+ A LL +G+N F++ ++GH T M +Y M E I+ L Sbjct: 324 RHSHAVHLLESGSNIKFVSERLGHHTINMTANVYLHVSKKMETESISRYENFL 376 >UniRef50_Q0RPW7 Integrase n=1 Tax=Frankia alni ACN14a RepID=Q0RPW7_FRAAA Length = 405 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 74/405 (18%), Positives = 124/405 (30%), Gaps = 48/405 (11%) Query: 16 RIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMV 75 I R G T K A A + + Sbjct: 3 WIQERANHVRVMWREGGRGSTPEYEKFASRTEAEVYKTLVEAAGNRRPTPVVEDGRPPRP 62 Query: 76 TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYR 135 + T W + + T K + L+ + + ++ + +D+ + Sbjct: 63 IAGLPCTVETWATYWLSG-LSGVRGRTAKDYERDLRNHVLPLLGGLELTAVSSTDVGQWV 121 Query: 136 NELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG---FISTKPFEGVKKL 192 L ++G +T+ N LL L + A P + Sbjct: 122 KGL-------------QERGLAPKTIRNQHGLLSVLFQAAVDHEPQAMRPGNPCARTRLP 168 Query: 193 QRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEK--GIV 250 + + + L+ E L+ + + L +GLR GE L +VDL G Sbjct: 169 EASGEEMHFLTPAELERLLAALPPHYRPLVTTLALTGLRWGEATGLTARNVDLLGTPGTT 228 Query: 251 NVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 VR++L GPPKT RTVTL ++ L Sbjct: 229 AVRQSLQRQADGSLQLGPPKTRTSRRTVTLPAKLVDVL--------------------IP 268 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI-RRRNPYHTRHTFACWL 365 + K+ VF + W AV RAG+ + RHT A WL Sbjct: 269 VWSGKEGDEMVFT----TQRGSLVRHSHFYNRVWRPAVLRAGLVPGLRIHDLRHTHAAWL 324 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 ++AG I ++GH + + YG + +++ + L A Sbjct: 325 ISAGRPLPSIQRRLGHRSITTTIDRYGHLLPEVDRGDLDALQAAF 369 >UniRef50_B6G0S2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0S2_9CLOT Length = 376 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 91/418 (21%), Positives = 151/418 (36%), Gaps = 61/418 (14%) Query: 1 MSKLPTGVEIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSG 57 + GV RG +F GKR + SN +A + E Sbjct: 5 VKNYGGGVRKRGNTYHYYFDGKTIDGKRNKIEKSA---KTSNKSEALKQLEKAIEE---- 57 Query: 58 EFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRII 116 +++ T +F E + + +L +T K +L +I Sbjct: 58 -----------YYMSEIDFTLSDISFAEAREKFLSEYVANDLKDSTYTNYKQKLNKPQIK 106 Query: 117 ICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY 176 + E + IR I N + + G + V N + + SL F Sbjct: 107 VLEIYLLKDIRAKHIQNIIDYMALN-------------GFSKNMVKNTLRTISSLFNFCI 153 Query: 177 QSGFISTKPFEGVKKLQR--NRIKPDPLSKTEFNALMESEKG-QSQNLWKFAVYSGLRHG 233 ++ I P + V + + L+ E ++ K +Y+G+R G Sbjct: 154 RAELIKDNPCDKVVLPSKLTQPERKVALTNKEVKRILNRFKNTHWYLSLMLPLYTGMRRG 213 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYK 289 E L W++VDL+KGI+ VR NLT + PKT + IRT+ + P LEALK Sbjct: 214 ECCGLRWKNVDLDKGIIYVRENLTQDKGKKWIISTPKTKSSIRTINIPLPLLEALK---- 269 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 KS + + V + +L GI Sbjct: 270 WQLERNKSNNVATNSD--------------THVLVRDNGSIITNDTLKYLSRVINYDLGI 315 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 + N ++ RHT+A L+ GAN ++ +GH + + +IY D+M D+ + +LN Sbjct: 316 K-FNYHNLRHTYATLLIEKGANIKDVSVLLGHASIKTTMDIYVNNTDNMRDKTLNILN 372 >UniRef50_C7H630 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=24 Tax=Firmicutes RepID=C7H630_9FIRM Length = 463 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 66/447 (14%), Positives = 127/447 (28%), Gaps = 79/447 (17%) Query: 6 TGVEIRGRYIRIWFMFRG-----KRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 + R + + ++ K+ ET N KK + ++ + G F Sbjct: 2 ASIVKRNNRYCVVYTYKHTNGTLKQKWETFTDLAD-AKNRKK------EVEYKESVGTFV 54 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICE 119 +T +L + + T+ +T + + + + Sbjct: 55 ----------------APQCRTLKDLLKEYVTLYGRTKWALSTYQSNTALISNYIEPLIG 98 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 S + + I Y LL E + + + + TV + +L S A + Sbjct: 99 SMKLQDLTTRVIEGYYQRLLKYEAVDPMCGKRQHQYVSPGTVRSVHKILRSAFEQAVKWE 158 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAAL 238 + P + K D + +E L + LR GEL L Sbjct: 159 LMEKNPCIYATLPKYTAKKRDIWTAETLFHALEVCDDPRLRLCINLSFSCSLRLGELLGL 218 Query: 239 AWEDVDLE-------KGIVNVRRNLTILDM---------------------------FGP 264 W+ VD+ + + + + L +D+ Sbjct: 219 TWDCVDISPESIEAGRASIYINKELQRVDIASLNALENKNVITRFPSLSSRCTTVQVLKS 278 Query: 265 PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCN 324 PKT++ IRT+ L + E L + + Y V Sbjct: 279 PKTDSSIRTIFLPKTVAEMLVHYKAEQDMTKDALGAEYAD--------------YNLVVA 324 Query: 325 GKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW-LLTAGANPAFIASQMGHET 383 G S++ ++ + + + RH+ + L G + + GH Sbjct: 325 GPLGMPTEQSTINGALKQLIEENDLPKVVFHSFRHSSITYKLKLNGGDIKAVQGDSGHAQ 384 Query: 384 AQMVYEIYGMWIDDMNDEQIAMLNARL 410 A MV E Y +DD + Sbjct: 385 ASMVTEQYAHILDDDRRLNAQRFDDFF 411 >UniRef50_P96629 ICEBs1 integrase n=1 Tax=Bacillus subtilis RepID=INT_BACSU Length = 368 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 70/394 (17%), Positives = 132/394 (33%), Gaps = 55/394 (13%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 G+R R S K+A L A + E + + Sbjct: 24 GERIRTR-----PVASTRKEALELEAKLRREFQE----------------ERARKSRSVS 62 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 F L I+ E + N + K + + I I + +I ++R L+ Sbjct: 63 FPTLISIYLASCEIDSKPNYYQNQKYIINKHISDYFLKSDIQKITHREITDFRKHLMET- 121 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 G + ++V+N + L + A + P + VK+L R K Sbjct: 122 ------------GLSNKSVNNIMTSLSKIFDTAVHEEILKRNPCDNVKRLPLTRKKMKFW 169 Query: 203 SKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL 259 EF + + + A +GLR GE+ AL W+D+D ++V ++ T L Sbjct: 170 RPEEFKKFISLIPQDQLLFKTFYTVAFLTGLRCGEMLALQWKDIDKILLEIDVHKSCTWL 229 Query: 260 D---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 D + PKT IR V++ + L+ L+ + + + + Sbjct: 230 DGQFVVTTPKTKNSIRRVSINKKLLKLLERWKEAQEELFNELGIRHSHDT---------Y 280 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 +F + + K + + + RH+ L+ G + I Sbjct: 281 IFQYKDT------PSRKDIFSRKIKYFCKDSDLTPIRLHDFRHSHVALLIHQGEDYITIK 334 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 ++GH + + ++YG + E L+ L Sbjct: 335 ERLGHGSVKTTIDVYGHLYPNKQKEMADKLDDLL 368 >UniRef50_A5VJF0 Phage integrase family protein n=4 Tax=Lactobacillus reuteri RepID=A5VJF0_LACRD Length = 386 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 83/419 (19%), Positives = 143/419 (34%), Gaps = 55/419 (13%) Query: 7 GVEIRGRYIRIWFMF---RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLR 63 V RG+ F GKR + G + +H + Y Sbjct: 4 NVRKRGKKWYYRFDIADKDGKRRQYERVGGDS-----------YKEAMHRLRVALELYEN 52 Query: 64 RFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICESTP 122 VT + + + W +T L+ NT + L Sbjct: 53 --------TGAVTNTDKISTHDYFEFWYDNYVKTNLSKNTQLNYRHVLDKYVQPTLGIYQ 104 Query: 123 ISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQ-SGFI 181 +S + I N++ D+ R + TV+ + ++ R A + Sbjct: 105 LSKVTPELIQKTINKIADSTEYKPDHSRLHGH-----TVEIILMVIKEGFRQAVHPWHIL 159 Query: 182 STKPFEGVKKLQRN-----RIKPDPLSKTEFNALMESEK-GQSQNL-WKFAVYSGLRHGE 234 + P E V++ + N R ++ +FN L+E G +L + Y+G+R GE Sbjct: 160 TQSPAEYVRQPKYNHPKTTREDLKIITLQQFNQLLEQFPLGHPFHLPLLISFYTGMRRGE 219 Query: 235 LAALAWEDVDLEKGIVNVRRNLTILDM----FGPPKTNAGIRTVTLLQPALEALKEQYKL 290 +A L W++V L +NV + + G KT A RT+ + + ALK Q +L Sbjct: 220 VAGLEWDNVSLPDAEINVTQQMKQYSKTDVRLGKLKTAASYRTIAIGDQLIHALKVQRRL 279 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 +R YH VC + + +S+ + K G Sbjct: 280 QNENRLRYGKNYHES--------------NFVCTKENGKPVTPNSIKYYASTVTKELGFP 325 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 N + RHT A LL AGA+ + ++GH + Y + + +L+ Sbjct: 326 -FNFHSLRHTHATMLLEAGASAKEVQVRLGHNKIATTLDTYVHLSNKKKHQTANLLDQI 383 >UniRef50_A2RN22 Phage integrase n=9 Tax=Streptococcaceae RepID=A2RN22_LACLM Length = 404 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 71/402 (17%), Positives = 125/402 (31%), Gaps = 53/402 (13%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHE-INSGEFEYLRRFPQSSTGAKMVTTRVIK 81 GK+ R T+ T N K N +++ I +G + + Sbjct: 39 GKQVRTTV-----TAKNRKTCENKAHQAMNKFIKNGSTVAREKVSFDN------------ 81 Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 F L W + + NT++ + LK + + + I + N N+ Sbjct: 82 -FNALATSWFDSYKLTVKANTIRINSNFLKNYILPALGNYKVEKITTVLLQNIVNDWARN 140 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR---IK 198 + +KG++ + ++ +L + Q G IS P V + K Sbjct: 141 ANTAEIVNGNREKGKSKDY-KLLLNIIKRILDYGMQLGVISDNPAIKVFSPKLKTRTVKK 199 Query: 199 PDPLSKTEFNALMESEKG--------QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 + E ++ +S L+K + +GLR E AL+W D+D V Sbjct: 200 IKYFNNDELKRFLDYLDSLQSTTANIKSTTLYKLLLATGLRICEALALSWSDIDFVNNTV 259 Query: 251 NVRRNL-TILDMFGP-PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGR 308 +V + L + KT R V++ + LKE K Sbjct: 260 SVSKTLIQYSNEIQDSAKTKESNRLVSVDSETISMLKEWRKHQN--------------YG 305 Query: 309 TEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTA 368 VF + + K+A + + RHT A L+ Sbjct: 306 AISLHDSLVFSY------HQKMRTYELERQHLVRHFKKAKVPNIGFHGFRHTHASLLMNN 359 Query: 369 GANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 NP I ++GH + +Y + E L Sbjct: 360 DVNPKEIQMRLGHADYSITMNLYSHLAKEKKKETAEKFANIL 401 >UniRef50_B1HWF0 Prophage Lp3 protein 1, integrase n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HWF0_LYSSC Length = 390 Score = 270 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 68/405 (16%), Positives = 128/405 (31%), Gaps = 67/405 (16%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK+ R +G+ K+A A I ++ +G ++ R +T Sbjct: 34 GKQKRTMKRGF----KTHKQAELALARIKLDVANGTYKQAR----------------AET 73 Query: 83 FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 + EL D+W E + +T KT + + I I + ++ Sbjct: 74 YQELYDLWIPHYEKTVEESTFTKTVGIFRNHILPAMREYKIDKITVDVCQKHVDKWAEKL 133 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP--- 199 + K +L FA + G++ T PF V K Sbjct: 134 KKFRVVKAYAAK----------------VLDFAIKRGYMQTNPFTHVDMPIAASKKVTII 177 Query: 200 ------DPLSKTEFNALMESEKGQS----QNLWKFAVYSGLRHGELAALAWEDVDLEKGI 249 + ++ + + + ++ L++ +SG+R GE AL W D++ Sbjct: 178 EEEEAENFYTREQLIQFLACLEQENNYKAYALFRLLAFSGMRKGEALALTWNDLNFTTNE 237 Query: 250 VNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHRE 305 + + + L+ KT RT+ + + L K + + Sbjct: 238 MRINKALSRGKNNKLYVKSTKTGFA-RTIKMDDKTMAIL--------KEWKKKQKQEYLV 288 Query: 306 YGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWL 365 G Q VF ++ + + K+ + + RHT L Sbjct: 289 LGFNTMQPKQLVFSN-----ERNEFLQPTKTRKWILHVQKKYKLGTITTHGLRHTHCSLL 343 Query: 366 LTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 AGA+ + ++GH Q IY +E I + L Sbjct: 344 FEAGASLKEVQDRLGHSDVQTTMNIYAHVTKKAKEEAIQKFASYL 388 >UniRef50_C9B4G9 Integrase n=1 Tax=Enterococcus faecium 1,231,501 RepID=C9B4G9_ENTFC Length = 380 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 63/413 (15%), Positives = 127/413 (30%), Gaps = 53/413 (12%) Query: 14 YIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAK 73 + G + + I K R + + + QS Sbjct: 3 KFEQYKKKNGDKAWKFQAYLGINPETGKSVKTTRRNFKTQREA---KLALARLQSEYENN 59 Query: 74 MVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 ++ KT+ ++ D+W + + +T+ KT+ K + IS I I Sbjct: 60 LLKKEKPKTYRDVYDLWMTEYKRTVRGSTLLKTERIFKNHVLEELGDIYISEITPIKIQK 119 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 ++ + T + + ++A + G I + P + ++K + Sbjct: 120 LMDKWANKYD----------------TAPKMMNYTGLVFKYAVRFGIIESNPTDAIRKPK 163 Query: 194 RNRI---KPDPLSKTEFNALMESEKGQS----QNLWKFAVYSGLRHGELAALAWEDVDLE 246 R + + K + ++ Q Q ++ +G+R E AL W D+D + Sbjct: 164 RRKKATVEEPFYDKKQLKLFLDELYNQPNLKIQAFFRLLAMTGMRKQEAGALEWRDIDFK 223 Query: 247 KGIVNVRRNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 VN+ + +T KT R +++ Q L+ L E + + F H Sbjct: 224 AKTVNIYKAVTRTANGLEIDTTKTVGSSRIISIDQGTLDKLLEWKEAVLPPSDEWLIFGH 283 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG------IRRRNPYHT 357 S+ + + + R + Sbjct: 284 SSAKNPHD------------------IMSLDTSRKWLLNIQDQMDKKQKKKLPRITVHGF 325 Query: 358 RHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 RHT A L+ GA+ + ++GHE Q Y ++ N + Sbjct: 326 RHTQASLLIEMGASLKEVQFRLGHEDIQTTMNTYAHVSKLAKEQLADKFNKFI 378 >UniRef50_C7XQF9 Phage integrase n=1 Tax=Fusobacterium sp. 3_1_36A2 RepID=C7XQF9_9FUSO Length = 351 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 70/387 (18%), Positives = 140/387 (36%), Gaps = 50/387 (12%) Query: 31 KGWEITNSNIKKA----GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGEL 86 ++ + +A + + + G + TF L Sbjct: 6 PAYKDDKTGKWEALFYYTDYKNERRKKHRRGFNTKREALEFEREFLTQSQFSIEMTFKSL 65 Query: 87 CDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYL 146 ++ ++ + TM+ + + T + E + I+ I ++ +LL E Sbjct: 66 YSLYHNDMKSRIKKTTMETKEYIVNTKILPFFEKMKVKDIKPIHIRKWQTDLLKME---- 121 Query: 147 DNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV-KKLQRNRIKPDPLSKT 205 + + L ++ +A + + P +++ + LS Sbjct: 122 ---------YSKTYLKTIYNQLTAIFNYAIRFHNLDKNPCHIAGSIGKKDADEMQILSLQ 172 Query: 206 EFNALMESE-KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM--- 261 EFN +++ +++ + ++G+R GEL AL +EDVD E + + +N I+ Sbjct: 173 EFNKMIDCVTDKENKFFYIILFWTGMRKGELLALTYEDVDFENKTITINKNFQIVKKERL 232 Query: 262 FGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPR 321 PKT G R + + L +K+ + + K++ FY Sbjct: 233 ITDPKTPRGRRVIAVNDVVLNCIKDLWNTSYKPNKTDKIFY------------------- 273 Query: 322 VCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGH 381 S SL + + A K+AG+ R + RH+ A +LL+ G N ++ ++GH Sbjct: 274 ---------LSKDSLKRQLDTACKKAGVPRIRVHDLRHSHASYLLSNGVNIVILSRRLGH 324 Query: 382 ETAQMVYEIYGMWIDDMNDEQIAMLNA 408 E Q IY D +LN+ Sbjct: 325 EKVQTTLNIYCHICPSSEDRLNDVLNS 351 >UniRef50_UPI0001C34CB8 phage integrase family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34CB8 Length = 468 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 64/445 (14%), Positives = 129/445 (28%), Gaps = 75/445 (16%) Query: 6 TGVEIRGRYIRIWF---MFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYL 62 + R + + G + + T ++ +A +A I ++ ++G F Sbjct: 2 ASIVKRKSKYSVVYNCIDENGVKRQRW-----ETFASQAEAKKRKAQIEYQQSTGTF--- 53 Query: 63 RRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLRIIICEST 121 KT EL + + I +T + ++ + I Sbjct: 54 -------------IAPTAKTIRELLEEYINIYGVNTWALSTYESRRALIDNYINPIIGDM 100 Query: 122 PISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFI 181 + + Y LL ++ S + + RTV +L + A + I Sbjct: 101 QLEQATPRVMDQYYRNLLTVKSKPRPYQSSRNEYLSPRTVKEIHKILRNAFNQAVKWEMI 160 Query: 182 STKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWK-FAVYSGLRHGELAALAW 240 S P + + + +E + +L A LR GE+ AL W Sbjct: 161 SRNPVLNATLPKCEAKPREIWTADTLFHALELCDDDNLSLALNLAFSCSLRMGEMLALTW 220 Query: 241 EDVDLEKGIVN-------VRRNLTILD---------------------------MFGPPK 266 + +D+ ++ V + L + + PK Sbjct: 221 DCIDISAESISQDCASIFVNKELQRVQKQSLEMLDGKGVIKVFPSILVSKHTALVLKEPK 280 Query: 267 TNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGK 326 T IR V L + E L ++ ++ Y +F + Sbjct: 281 TKTSIRKVFLPKTVAEMLLKRQAEQNELKELFGDEYT---------DYGLIFCSPMGT-- 329 Query: 327 QKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW-LLTAGANPAFIASQMGHETAQ 385 + N ++ G+ + + RH+ + L G + + GH + Sbjct: 330 ---PIEGQVINRALNKLIEDNGLPKVVFHSLRHSSITYKLKLNGGDMKSVQGDSGHAQLK 386 Query: 386 MVYEIYGMWIDDMNDEQIAMLNARL 410 MV ++Y ID+ Sbjct: 387 MVADVYSHIIDEDRRINAKRFEDAF 411 >UniRef50_A7WY94 Integrase homolog n=25 Tax=Firmicutes RepID=A7WY94_STAA1 Length = 397 Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats. Identities = 73/416 (17%), Positives = 141/416 (33%), Gaps = 73/416 (17%) Query: 11 RGRYIRIW----FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 + + +GK+ ++ G+ ++ L Sbjct: 10 KNGTYYFRANLGYDSKGKKIQKYRSGFTTKKEAREEYSKLLL------------------ 51 Query: 67 QSSTGAKMVTTRVIKTFGEL-CDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISH 125 ++ + TF +I+ +T++ T + +K + +S Sbjct: 52 --MKPEELSENKDKMTFKHYIFEIFLPWYKTQVKLRTYENRLPTIKKHFS-YFDKMAVSD 108 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 I D+ N++ +L K V L + A G +T P Sbjct: 109 IEPIDVQNWQLKLS--------------KKCKSSYVRAVQGLFSVAMDRAIVLGITTTNP 154 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQN---LW---KFAVYSGLRHGELAALA 239 + + +++ + K + +K EF ++ + L+ F +G+R GE A+ Sbjct: 155 SKIIGNVKKQKSKIEFWTKEEFEKVISLIYKEDYYQHFLFISLWFLFMTGMRIGEATAIQ 214 Query: 240 WEDVDLEKGIVNVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHR 295 WED+D + G++ + + L + F PKT A +R + L + L L E ++ + Sbjct: 215 WEDIDFDSGVLTINKTLYYKNQSNYRFVEPKTKASVRHIVLDKCTLTYLSEWKEVQQNLI 274 Query: 296 KSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPY 355 +++ +L K AGI R + Sbjct: 275 QTDFVM-----------------------SYNGIPTQKHTLSYAIERYAKLAGIHRIRIH 311 Query: 356 HTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 RH+ A L++ G NP I ++GHE + YG + N E LN +S Sbjct: 312 GLRHSHASLLISMGENPLIIKDRLGHEDIETTLGTYGHLYPNSNFEVANKLNGAIS 367 >UniRef50_C9AWV9 Integrase n=3 Tax=Bacilli RepID=C9AWV9_ENTCA Length = 389 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 61/402 (15%), Positives = 125/402 (31%), Gaps = 55/402 (13%) Query: 23 GKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKT 82 GK R T +G+ K+A I + + T Sbjct: 29 GKEVRTTRRGF----KTKKEAQLELNKIKLDFEK---------------NGSLKNNNKIT 69 Query: 83 -FGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 F +L ++W + + T ++ +I + I I N+ Sbjct: 70 YFKQLYEVWYEQHHKNIKETTKQRISIHFNNHILIEFGNLKIDKITPLFCQRVLNKWAE- 128 Query: 142 ETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD- 200 ++++ + F G ++ P E + ++ + Sbjct: 129 ---------------SLKSYPQLKIYTSKVFDFGILLGILTVNPMERTITPKISKTAQNE 173 Query: 201 ---PLSKTEFNAL---MESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 +K E +E+ K ++ ++G+R GE AL W DVD + +++ Sbjct: 174 SHSYYTKDELKQFFVRLETLKDDRSFAFFRLLAFTGIRKGEAMALTWGDVDFKNKTISIN 233 Query: 254 RNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRT 309 + L L + KT++ R V + L L K + S R Sbjct: 234 KTLAELKSGKPVIQDVKTSSSNRVVEVDNQTLAILSNWKKKVLQDKLSLGL-------RD 286 Query: 310 EKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG 369 + VF V + + Y + K + + R T A L +G Sbjct: 287 DNFDTSVVFCNSVYYNQNQYLYKSYANNVLLRLKRKFPDQKIIKVHDFRKTHASLLFESG 346 Query: 370 ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + +++++GH++ ++ +IY E ++ Sbjct: 347 VSIKDVSNRLGHKSTKITEDIYVKVTPTKKKESAQKFAEYMA 388 >UniRef50_C4Z3W8 Integrase/recombinase XerC n=7 Tax=Clostridiales RepID=C4Z3W8_EUBE2 Length = 400 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 71/389 (18%), Positives = 136/389 (34%), Gaps = 55/389 (14%) Query: 26 CRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGE 85 + K W N IKK G +Y R + + TFGE Sbjct: 16 VKFYCKDWTGENKQIKKRGF-------ATKREALDYERNY------KIRQENNLDMTFGE 62 Query: 86 LCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLY 145 ++T+ + + NT + + T + + ++ I D+ ++NE++ Sbjct: 63 FWKLYTEDVKNYVKLNTWLTKEHIVDTKILPYFRNLKMNEITPGDVRKWQNEMVA----- 117 Query: 146 LDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKL-QRNRIKPDPLSK 204 N K + +L ++ A + + + P + + + + + Sbjct: 118 --FRYENGKCYSQTYKKTMHNILSAIFNHACRFYNLKSNPARQAGNMGREEKKEMLFWTT 175 Query: 205 TEFNALMESE--KGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTIL--- 259 E+ E+ K S ++ ++G+R GEL AL ED D EK V + ++ L Sbjct: 176 EEYKKFSEAVIDKPVSFYAFEMLYWTGMRLGELLALTMEDFDFEKNTVRINKSYQRLQGQ 235 Query: 260 DMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFM 319 D+ PKT RT+ L + E ++E + + ++ F Sbjct: 236 DVITTPKTPKSNRTIKLPKFLAEEMQEYFAMLYDQTPTDRIF------------------ 277 Query: 320 PRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQM 379 + S L K +G+++ + RH+ L+ G + IA ++ Sbjct: 278 ----------LVTKSFLHHEMERGCKLSGVKKIRIHDLRHSHISHLIDLGFSAVAIADRV 327 Query: 380 GHETAQMVYEIYGMWIDDMNDEQIAMLNA 408 GHE+ + Y Y L+A Sbjct: 328 GHESIDITYR-YSHLFPSKQVAMADRLDA 355 >UniRef50_C7N7P7 Site-specific recombinase XerD n=3 Tax=Bacteria RepID=C7N7P7_SLAHD Length = 356 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 132/371 (35%), Gaps = 43/371 (11%) Query: 44 GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTM 103 + R H I G ++ +K + + F + +++T+ L +T Sbjct: 18 RDSRNRRRHTIKRGFKSEEEANEWEASFSKADSENMSMKFSQFMNLYTEDMRPRLRESTW 77 Query: 104 KKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 + + + + I D++ ++NE++ + G + Sbjct: 78 HTKQHMIDKKIMPFFGEMSMDEITTIDVIRWQNEMMSEK-------GPKGTGYAETYLRA 130 Query: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKL-QRNRIKPDPLSKTEFNALMESE--KGQSQN 220 L ++ A + + P V K+ + + +K E+ E+ K S Sbjct: 131 VNNQLNAIFNHAVRYYGLPKSPCARVDKMGSKQGDEMKFWTKEEYLKFAEAIMDKPDSFT 190 Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI---LDMFGPPKTNAGIRTVTLL 277 ++ + GLR GE+ AL D++LE+ ++V + D PKT IR VT+ Sbjct: 191 AFEILYWCGLRVGEMLALTPSDINLERSTISVTKTFQRIHGRDTVTEPKTKKSIRLVTMP 250 Query: 278 QPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG 337 + E + E + +F ++ + + Sbjct: 251 KFLSEEIAEYIA------------------SLDVGDHDRLF-----------PFTKTRMH 281 Query: 338 ARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 + K +G++R + RH+ L+ G + IA ++GHE+A + Y Y + Sbjct: 282 HEMDRGCKESGVKRIRIHDLRHSHVSLLIDMGFSAVAIADRVGHESANITYR-YAHMFPN 340 Query: 398 MNDEQIAMLNA 408 + + L+A Sbjct: 341 KQRDMASALDA 351 >UniRef50_UPI0001C3746F phage integrase family site specific recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3746F Length = 366 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 74/416 (17%), Positives = 141/416 (33%), Gaps = 64/416 (15%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 M+K + + R F G R K + + G A + ++ Sbjct: 1 MAKRGSNIYKRKDG-----RFEG-RVHVGYKA-DGSKKYRSVYGKTLAEVKEKMAD---- 49 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 + + + + T E D W + ++ ++ L + I Sbjct: 50 ------LYAVRTEKNISAIRLTVREAADQWLSAARLRVKESSYANYENILNNHILPILGG 103 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 IS + I ++ + L + + G + +TV + + + S+ R+ Y+ Sbjct: 104 EYISSLTTGRINDFIHYKLT------NGRLKGQGGLSAKTVRDIMTVYRSVERYVYREYG 157 Query: 181 ISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESE---KGQSQNLWKFAVYSGLRHGELAA 237 I + D L+ E L ++ +++GLR GEL Sbjct: 158 IRE---TNFTMPKTESGNADVLNCEERKKLESYLIKNMDRTNLAVLLCLFTGLRIGELCG 214 Query: 238 LAWEDVDLEKGIVNVRRNLTILD-------MFGPPKTNAGIRTVTLLQPALEALKEQYKL 290 L WED+D EK ++V+R + + + G PK+ IRTV + + L++ + Sbjct: 215 LKWEDIDFEKNTLSVKRTVQRVSRNGKSQVIIGSPKSRTSIRTVPIPIFMMALLRKFRSI 274 Query: 291 TGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR 350 FV ++ R+ A +K GIR Sbjct: 275 ----------------------DSLFVITNLS------KPTEPRTMQNRFKAILKLCGIR 306 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 N + RHT+A + G +P ++ +GH A + Y D+ ++ L Sbjct: 307 NVNFHSLRHTYATVCIEKGFDPKALSELLGHADASITLNRYVHSSMDVKKNYVSRL 362 >UniRef50_A7A695 Putative uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A695_BIFAD Length = 389 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 70/386 (18%), Positives = 139/386 (36%), Gaps = 50/386 (12%) Query: 14 YIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAK 73 IR + GKR + + +++ + ++++ + S GA Sbjct: 4 TIRQYTTKSGKRYEVRYRKPDGSSTGRR-------GFKRKMDADAWGAANVTAAKSVGAY 56 Query: 74 MVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILN 133 + + + + W K+T+ + +K + + + I ++ Sbjct: 57 IDPQAGRRLVEDFWEPWLAAKKTKAKPSYIKSLEDAWRVHVEPQWGMREMQSITRDEVQR 116 Query: 134 YRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQ 193 + +L R+ LL SL+ A I P +G++ + Sbjct: 117 WVTDLAGR--------------RSASVTIRAENLLRSLMERAKADRCIHDNPCDGIELPR 162 Query: 194 RNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVR 253 + K LS E + + G + + G+R GEL AL EDVDL++ +++ Sbjct: 163 KQVRKHVYLSADELSRVAMQC-GWREPIVLTLGLCGMRWGELVALRVEDVDLQRCRLHIY 221 Query: 254 RNLTILD---MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTE 310 R++T L + PKT+ G R+V L Q + Sbjct: 222 RSITRLSSRLVETDPKTHDG-RSVMFPLVLRPLLARQCEGRR------------------ 262 Query: 311 KQKLHFVFM--PRVCNGKQKPYYSVSSLGARWNAAVKRAGIR--RRNPYHTRHTFACWLL 366 F+F + ++ + + A++RAG+ + RHT A ++ Sbjct: 263 --SSDFLFTAPGEPLDEPMGNGWNPTRSDGWFAVALRRAGVDRGHMTIHDLRHTAASLMV 320 Query: 367 TAGANPAFIASQMGHETAQMVYEIYG 392 +GAN + Q+GH++A M ++Y Sbjct: 321 QSGANVKTVQRQLGHKSAAMTLDVYA 346 >UniRef50_B1R824 Prophage LambdaBa04, site-specific recombinase, phage integrase family n=4 Tax=Clostridium perfringens RepID=B1R824_CLOPE Length = 368 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 67/397 (16%), Positives = 139/397 (35%), Gaps = 68/397 (17%) Query: 24 KRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTF 83 KR R +G+ K+A ++++G + Sbjct: 26 KRIRVKKQGF----KTKKEAERFVNEYSSKVDNGFL---------------LPKSKDIYL 66 Query: 84 GELCDIWTKIKET-ELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGE 142 + W + + NT S+++T + + + ++ + I N+ N LL + Sbjct: 67 KDFILDWFYNHKILSIGINTKNNYLSRIETYIVPLLGNYKLTELDTLTIQNFYNYLLTKD 126 Query: 143 TLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPL 202 T + I L + L++A + I+ P + ++K+ + K + Sbjct: 127 T-----------PLKPSSAKKVIEALSNCLKYAKKLKLITYLPTD-IEKVNIEKPKIEFW 174 Query: 203 SKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDM 261 SK E + + K +G+R GEL L W DVD ++G +N+ R + Sbjct: 175 SKQELDFFLNEIKDTYLYFPVLICALTGVRVGELCGLKWCDVDFKRGYLNITRQVISDKS 234 Query: 262 FGPP------KTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLH 315 KT RT+++ + L RE+ + K + Sbjct: 235 TNTLVCTENLKTTKSDRTISIPKVLL----------------------REFEKNLKAPNN 272 Query: 316 FVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG--IRRRNPYHTRHTFACWLLTAGANPA 373 F+ + R + + ++ + V + + + + + RHT A L+ G N Sbjct: 273 FIVLSR-----ENEMCNPRNISMDFTKKVNKYKDRLPQISIHGLRHTHATLLILNGENIK 327 Query: 374 FIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 ++ ++GH Y +++M D +L+ Sbjct: 328 IVSDRLGHNDITTTLNTYTHIMEEMKDNTAELLDNLF 364 >UniRef50_C7H2F1 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2F1_9FIRM Length = 475 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 63/466 (13%), Positives = 134/466 (28%), Gaps = 92/466 (19%) Query: 1 MSKLPTGVEIRGR-YIRIW----FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEIN 55 M+K+ ++ G I + RG++ KK Sbjct: 1 MAKITKRMKKDGTCSYCIRVSNGYDRRGRQVMVNRTFTPPPGMTGKKLEKELQR------ 54 Query: 56 SGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIK-ETELTTNTMKKTKSQLKTLR 114 F Q ++ +L + W E +L T+ + + Sbjct: 55 -----QADAFEQEVHAGVLL--DASMKVDDLIERWFTEYAEKKLKPKTVYNYRRLV-PRI 106 Query: 115 IIICESTPISHIRYSDILNYRNELLHGETLYLDNPRS----------------------- 151 + ++ + ++ + + L + Sbjct: 107 SAGLGQLKVCQVKPAHLMAFYSNLEEQGVREDSTYTATPALLERLPHGKRGQIAKAAGIG 166 Query: 152 --------NKKGRTVRTVDNY------------------------------IALLCSLLR 173 + T + +L S+ Sbjct: 167 DDTMRNVYRGANVSQSTAEKVVRVVGLPLSKAFTEHVKDGGRLNGNTVQHYHRMLSSVFT 226 Query: 174 FAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKG---QSQNLWKFAVYSGL 230 A Q G + P + + + I L + + L+E+ + Q + + A+++G Sbjct: 227 KAVQWGLVPENPCKRAEAPKAEEIDVQALEEKDVARLLEALQDAPAQFSVITQLALFTGA 286 Query: 231 RHGELAALAWEDVDLEKGIVNVRRNLTIL----DMFGPPKTNAGIRTVTLLQPALEALKE 286 R E+ L W DVDL+ G +++ RN+ + +F PKT R + + ++ L+E Sbjct: 287 RRSEICGLRWCDVDLDAGTLSIERNVQYIPGKGTVFTTPKTKRSRRCIKIGPECVQLLRE 346 Query: 287 QYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKR 346 + R T + R K V + ++ + + Sbjct: 347 YRQHQRAERLRMGTAWVRRVEIAGK----MVENDLLFTKWNGAPIDPKTVTTWFPGFLAA 402 Query: 347 AGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 + + + RHT A L+ A ++ ++GH +IY Sbjct: 403 HDLPPVHFHSLRHTNASLLIAAHVPVTAVSGRLGHAKTSTTTDIYA 448 >UniRef50_A1WV14 Phage integrase family protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WV14_HALHL Length = 384 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 83/408 (20%), Positives = 146/408 (35%), Gaps = 42/408 (10%) Query: 12 GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTG 71 ++ G+R RET G T N ++ I EI G F+Y FP S Sbjct: 9 NGVLQYDLCLYGRRFRET-SGLRDTPENRRRIRRDLRRINAEIEMGTFDYAAWFPNSRKL 67 Query: 72 AKMV-------TTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPIS 124 A+ + + FG W ++ + + ++ L+ I P+ Sbjct: 68 AEAQRWLREQGSRAPDQRFGPYAWQWYQLHLGDWKESYARRVCGVLEGYLIPHFGEWPLD 127 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTK 184 I + +R+ELL ++ + ++ + L ++RFA +S Sbjct: 128 QITERAVRAFRHELLE------LTNARGERRLSNARINFILTPLAGVMRFA-ESELGIEH 180 Query: 185 PFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVD 244 P ++ L+ +R P PL+ + +A + + +K Y+GLR E+ L VD Sbjct: 181 PMRQIRPLRDDRDDPMPLTAEQVHAFLAAVDPDYYLYFKLRFYTGLRSCEVDGLKVCYVD 240 Query: 245 LEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 LE+ + VR K R + L L + Sbjct: 241 LERRQLRVREARV-DGRQTTLKHRKTRRDIPLSPGLAAELDRHIRGRQ------------ 287 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSL-GARWNAAVKRAGIRRRNPYHTRHTFAC 363 +VF S + W +K G+ R Y TRHT A Sbjct: 288 --------GDDYVF-----TRSDGRPLHPSWVAEQVWKPTLKALGLAPRRVYQTRHTAAV 334 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 L AG NP F++ +GH + +M++E Y ++ + + + A ++ Sbjct: 335 LHLAAGENPLFVSRLLGHSSTKMLFERYAPFVANALGDDGSAFEAMMA 382 >UniRef50_A8ZS80 Integrase family protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS80_DESOH Length = 403 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 89/403 (22%), Positives = 156/403 (38%), Gaps = 63/403 (15%) Query: 9 EIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRA-LIVHEINSGEFEYLRRFPQ 67 + R GK + +L + + A +LR + + + G+ + Sbjct: 15 QKRDNTFYFRKKHNGKVFKRSLNTTD-----KRTARDLRNFYLRNLVEYGQLD------- 62 Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 A + TFGE+ W I + E+ +T S + + + PI+ I Sbjct: 63 ----APEKVDYDVITFGEVAKEWASIHKKEVRYSTWPDYVSSMNGHILPNFKDMPIAEIT 118 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 Y D+L +R+ L G + +N + + S+ +A + G I Sbjct: 119 YGDVLKFRSGLKVG----------------AKRANNILVPMKSVFDYADREGIIQDNVMR 162 Query: 188 GVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDV--DL 245 +K+L + P S E N L+++ Q A ++G+R GE L W D D+ Sbjct: 163 KIKRLSEEAPEIHPFSYDEVNRLLDAVHPWYQPYLIVAFFTGMRAGEQNGLCWSDFLEDM 222 Query: 246 E-KGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 + + + +R+ G PKT R + L LEAL EQ KLTG ++ +T Sbjct: 223 QPEPRIFIRKTYVY-KKDGIPKTKKSKRYIKCLPQVLEALSEQRKLTGKNKHIFLTI--- 278 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGA-RWNAAVKRAGIRRRNPYHTRHTFAC 363 + + W A+++AGI R P TRHTFA Sbjct: 279 ----------------------DGRRMTPDHIRKEVWIPALEKAGIEYRPPIQTRHTFAT 316 Query: 364 WLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAML 406 +L+AG + ++ + +GH + QM+++ Y W+ + Sbjct: 317 MMLSAGEDIGWVQNMLGHSSLQMIFQRYYAWVPEKTRSDGHAF 359 >UniRef50_C6JIX5 Phage integrase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JIX5_FUSVA Length = 357 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 66/419 (15%), Positives = 140/419 (33%), Gaps = 74/419 (17%) Query: 1 MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 MS + E + ++GKR ++ +G+ K+A + + ++ Sbjct: 1 MSTYKSKDEKSWETSFYYIDYQGKRKQKHKRGF----RTKKEAEKWKREFLVKM------ 50 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICES 120 T+ +F + D++ + + + TM + + + Sbjct: 51 ---------------TSDPTMSFQSMYDLYYEDLKVRVKYITMINKEKIFNLHILPFFKD 95 Query: 121 TPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGF 180 +S I I ++N+LL KK + + L + +A + Sbjct: 96 ISVSDITPLTIREWQNKLL-------------KKDYSNSYIGGIQKYLNAFFNYAIKFHN 142 Query: 181 ISTKPFEGVKKLQ--RNRIKPDPLSKTEFNALMES-EKGQS--QNLWKFAVYSGLRHGEL 235 + + P + K + + + + + EF + + K ++ + Y G R GE+ Sbjct: 143 LKSNPLKITGKAKLNKPKKEMEIWEPHEFEKFIGTFLKEDYLHRSFFSLLFYGGFRIGEV 202 Query: 236 AALAWEDVDLEKGIVNVRRN---LTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTG 292 AL +D+D + + V +T + PKT R V + +E LK+ K Sbjct: 203 LALRLDDIDFKNSTIRVDETKTFVTKDAIINSPKTEKSNRVVDMPLSVMEILKKHIKT-- 260 Query: 293 HHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRR 352 + + N SS+ +K+AG++ Sbjct: 261 --------------------------LYGIENRDFIYSRHQSSIRNNLRRHLKKAGLKNI 294 Query: 353 NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 + RH+ L+ G N IA ++GH+ Y + + +L ++ Sbjct: 295 RIHDLRHSHVSMLIHMGVNVVDIADRVGHDNPTTTLNTYSHMYSNNGKKIADLLENNIT 353 >UniRef50_C4ZBA5 Phage integrase family protein n=10 Tax=Firmicutes RepID=C4ZBA5_EUBR3 Length = 363 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 132/371 (35%), Gaps = 47/371 (12%) Query: 44 GNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTM 103 N + H+ G K + + G D++ + K EL T+ Sbjct: 25 ENWKGEKKHKKKRGFATKKEALEWEREFLKSTSANMEMMLGAFVDVYFQDKAGELKERTI 84 Query: 104 KKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDN 163 K + ++ + + ++ I SDI+ ++NE+ KG + + Sbjct: 85 KNKQYMIEAHVLPYFANKRMNEITPSDIIQWQNEM-------------RAKGYSQTYLRM 131 Query: 164 YIALLCSLLRFAYQSGFISTKPFEGVKKL-QRNRIKPDPLSKTEFNALMESEKG--QSQN 220 + +L A + P + VKK+ + + K + +K E+++ + + Sbjct: 132 VQNQITALFTHACNIYNLGNNPCKKVKKMGKADADKLNFWTKAEYDSFIRGIDKESRYFV 191 Query: 221 LWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTI---LDMFGPPKTNAGIRTVTLL 277 +++ ++G R GE+ AL D+D E +++ + D+ PKT IR + + Sbjct: 192 IFEILFWTGCREGEMLALTKSDIDFENNQISITKTYYRTERRDIITTPKTEQSIRVIDIP 251 Query: 278 QPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLG 337 + + ++ +E F ++ Sbjct: 252 EFLKKEIEAYVNRCYGLPDNERLF----------------------------PIVAEAVQ 283 Query: 338 ARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDD 397 + ++G+++ + RH+ +L+ G P I ++GH ++ YG + Sbjct: 284 HKLKRECAKSGVKQIRVHDLRHSHVAYLINQGVQPLIIKERLGHRDIKITLNTYGHLYPN 343 Query: 398 MNDEQIAMLNA 408 + MLNA Sbjct: 344 QQKKVADMLNA 354 >UniRef50_A6FXR9 Phage integrase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXR9_9DELT Length = 421 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 75/391 (19%), Positives = 134/391 (34%), Gaps = 32/391 (8%) Query: 22 RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIK 81 G+ R T + A E+ +G F+ + +G + + + Sbjct: 10 DGRTKRVRKVSPVQTK---RAAQAFERETRAELMAGLFDEENNHGPNGSGRRKAKPQAVP 66 Query: 82 TFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHG 141 T E + + T + +S LK + + + I I Y+ L Sbjct: 67 TLAEFAPEFMAYQATLNKATELASKRSSLKNHLLPVFGDLRLDQIDARAIDRYKMRKLSP 126 Query: 142 ETLYL--DNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKP 199 E R +G +T++N++ +L LR A + G + P ++ L+ + Sbjct: 127 EHAATVASTRRRAGEGLKPKTINNHLMVLSRALRVAQKWGVLDRVP--EIELLRVTKQPF 184 Query: 200 DPLSKTEFNALMESEKGQ---SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNL 256 D L E + + + A +GLR GEL AL W+ V L + V + Sbjct: 185 DFLDFEEAERYLAAAREHYPDWHVFVLVAARTGLRVGELLALQWKHVRLAGRTLRVELSY 244 Query: 257 TILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHF 316 T PK+ R V L AL+ ++ G + + Sbjct: 245 TRAGGVSSPKSGKA-REVPLTWDVARALEVHREV---------------LGAKARARDAL 288 Query: 317 VFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIA 376 VF S+ S+G + K A +R +P+ RHTFA + G + Sbjct: 289 VFPNA-----DGERGSLRSVGHFVSRIAKAAKLRHVHPHMLRHTFASHAVMRGVPMRVVQ 343 Query: 377 SQMGHETAQMVYEIYGMWIDDMNDEQIAMLN 407 +GH + +M Y + + + I + Sbjct: 344 EWLGHASIEMTMR-YAHLAEGIGLDLIDRIA 373 >UniRef50_A0AGT2 Complete genome n=7 Tax=Bacilli RepID=A0AGT2_LISW6 Length = 386 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 70/404 (17%), Positives = 145/404 (35%), Gaps = 39/404 (9%) Query: 21 FRGKRCRETL-KGWEITNSNIKKAGNLRALI--VHEINSGEFEYLRRFPQSSTGAKMVTT 77 ++ K+ ++ + + T+ + KK + + G +Y+ T + +++ Sbjct: 8 YQDKKTKKWFFRAYLGTDMDGKKIQKTKRGYGSQRDAKRGYDQYMLTHGFHQTLSSHLSS 67 Query: 78 RVIKTFGELCD-IWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRN 136 TF E + E ++ + T + + + ++ I I DI ++ + Sbjct: 68 ASQMTFEEFYRIRFVNWYEKQVKSQTFENAQFIFEK-KMEYFYRMRIRDISSQDIEDWMH 126 Query: 137 ELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNR 196 EL T + ++ + L +L A + G I P + V + Sbjct: 127 ELSQTATRNSRKQEEI-TTLSRTYINRILGHLRIILNRAVKEGLIERNPVDSVSYFPKEN 185 Query: 197 IKPDPLSKTEFNALMESEKG------QSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIV 250 K + EF +M + +++ Y+GLR GEL AL+WE+V+ EK + Sbjct: 186 NKVEFWEIEEFQKVMAMIPENSIQNQHRKIIYEMLFYTGLRIGELQALSWENVNFEKNQI 245 Query: 251 NVRRNLTILD----MFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREY 306 V + L F PKTN RT+++ + + LK+ +L Sbjct: 246 TVEKTLIYQGKNDWYFSTPKTNKSYRTISIGKTLSKRLKKWQELQRM------------- 292 Query: 307 GRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLL 366 + + + S + ++AG+ + RH+ L+ Sbjct: 293 ----------IGNFEYMSQLDGTFTPSYSFSNWLKDSARKAGVIPIKLHALRHSHVALLI 342 Query: 367 TAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARL 410 P I ++GH Q+ YG + + + +L+ + Sbjct: 343 DQNIQPLVIQERLGHANIQITLGTYGHLYAKSDSQVVDVLDKII 386 >UniRef50_Q30RZ4 Phage integrase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30RZ4_SULDN Length = 392 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 78/413 (18%), Positives = 152/413 (36%), Gaps = 60/413 (14%) Query: 8 VEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQ 67 + R + + F KR R + +N ++ I+ E+ G Sbjct: 19 IIERSGHWNLDFFIDNKRQRRSTSL----KANSDNLLIIKKEIIPELMLGL------TGA 68 Query: 68 SSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIR 127 + + T E + + + ++ + K + T IS I+ Sbjct: 69 NIALEEEFDDPKDMTVEEFGIKSINSNKPNIKPHVYERKMAAFKNYVVPYFGKTKISAIK 128 Query: 128 YSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFE 187 DI +++N LL T + Y ++ ++L+ A+ + I P + Sbjct: 129 PMDIQDWQNRLLTT--------------LTPSSAQKYRSIFYNILQDAFINEIIVKNPMQ 174 Query: 188 GVKKLQRNRIKPDPLSKTE---------FNALME--SEKGQSQNLWKFAVYSGLRHGELA 236 VK ++ + + E ++E ++N +K +++G+R GE Sbjct: 175 LVKAPKQKSKQKTLFDEEEDVMPFNNAEIKLILEDTQLFEHNKNFYKLMLFTGMRPGEAV 234 Query: 237 ALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRK 296 AL W+D+ +K + + + G PKT + +R V +L LE L Q KLTG Sbjct: 235 ALRWQDILFDKKQIKIMQTRV-AGKDGTPKTMSSMRYVDILPQTLEVLLSQQKLTG---- 289 Query: 297 SEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYH 356 ++F K Y+S +L A + + R I+ R Y+ Sbjct: 290 ----------------DKEYLF----YTRSGKRYFSHDTLAASFKRLLTRNKIKERVLYN 329 Query: 357 TRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 RHTFA +++ G + +++ +GH+ + Y +I + + L Sbjct: 330 LRHTFASQMISQGVDIVWVSKTLGHKDVSITLSTYTKFIQEDEATRFQKLEKF 382 >UniRef50_B4AH95 DNA integration/recombination/invertion protein n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AH95_BACPU Length = 427 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 78/424 (18%), Positives = 143/424 (33%), Gaps = 45/424 (10%) Query: 6 TGVEIRG-RYIRIW----FMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 +E RG R+ + GKR R+ I+ + ++ + Sbjct: 2 ASIEKRGSNSFRLVVETGYDANGKRLRKY--------KTIRIEDHKLLKTKRKLQEYLSD 53 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTK--IKETELTT---NTMKKTKSQLKTLRI 115 L +F + TF W + + + T S LK + Sbjct: 54 QLYQFKMEVNSGEY-IEPEKLTFESFIYKWKEKKLYQKSGKPYSLTTSDVYWSLLKNHIL 112 Query: 116 IICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLR-F 174 + I I+ I+++ ++L P G RT+ + LL + + Sbjct: 113 PVFGHMRIERIKSLHIVDFLDDLSKDGARKDGKPG----GLGERTILDIFKLLQVVFKTA 168 Query: 175 AYQSGFISTKPFEGVKKLQRNRIKPDPLSKTE----FNALMESEKGQSQNLWKFAVYSGL 230 A + I P +G+ + + + E L E + + + A+ GL Sbjct: 169 AEEWKIIKIDPMKGLPLPVNEKKEMNYFEADEAAQCIKILYEEVDIKWRLYFLAAMIGGL 228 Query: 231 RHGELAALAWE-DVDLEKGIVNVRRNLTIL----DMFGPPKTNAGIRTVTLLQPALEALK 285 R GE AL W DVD + G + R+L+ PK+ + R V + + L Sbjct: 229 RRGEGLALEWHLDVDWDAGGFKINRSLSKTIQGKPHVKDPKSKSSKRFVQMPDWYMNELS 288 Query: 286 EQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVK 345 Y + ++ + E ++F Y ++ +WN + Sbjct: 289 LYYHMWKREKEKLDDAW-------EGGDHQYIFHSGF-----GKPYYFTTPTTKWNRITQ 336 Query: 346 RAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAM 405 + I+ + RHT L+ AG + + I + GH +A+ +IYG D+M Sbjct: 337 KYKIKNIRLHDLRHTMVALLMEAGESISAIQRRAGHASARTTSDIYGHVTDEMKKSAANH 396 Query: 406 LNAR 409 N Sbjct: 397 FNKF 400 >UniRef50_C2HC71 Phage integrase family site specific recombinase n=12 Tax=Enterococcus RepID=C2HC71_ENTFC Length = 409 Score = 266 bits (682), Expect = 8e-70, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 122/388 (31%), Gaps = 45/388 (11%) Query: 38 SNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETE 97 + ++A ++ EI S E+ T + D W + Sbjct: 43 KSHEEAERFAKIVEGEIASEEY--------------TQNNPKNLTIEKFMDDWINNYKMN 88 Query: 98 LTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRT 157 + T ++ +K + +D + N+LL + K+G + Sbjct: 89 VKEGTRIVHRANIKMYITPYIGKYKLDKYTRADHQRFINQLLTKK-----GLGRTKEGLS 143 Query: 158 VRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQR--NRIKPDPLSKTEFNALMESEK 215 V T + A L + + A Q +I P V+ + ++ K + + +E K Sbjct: 144 VTTAKSINATLSNAFKKAIQLRYIKNNPTSFVEFPRNPSDKKKVKYYTFDQSELFLEFAK 203 Query: 216 GQ----SQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGP------- 264 + + GLR E L W D+D + +N+ R GP Sbjct: 204 KEKSFIWYPFFLIIFDQGLRKSEALGLQWADIDFSQNTLNINRERLGAAEKGPNKGLIIT 263 Query: 265 --PKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRV 322 KT +G R++ + + +AL + F+F+ Sbjct: 264 DDTKTPSGTRSLPMTKRVKKALLTLRNQVIKE---------FGFLPETDDHEAFLFINTY 314 Query: 323 CNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHE 382 K ++ + KRA + + RHTFA AG I +GH+ Sbjct: 315 RKNK-GIPIRDRTVNGASHRIEKRANLPHITVHDGRHTFAARTRQAGIPLEDIKDFLGHK 373 Query: 383 TAQMVYEIYGMWIDDMNDEQIAMLNARL 410 ++Y ++ + L + Sbjct: 374 DVSTT-QVYAHISPEVKKRSMNQLENYI 400 >UniRef50_B0KSD4 Integrase family protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KSD4_PSEPG Length = 417 Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats. Identities = 131/409 (32%), Positives = 196/409 (47%), Gaps = 20/409 (4%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 TG+EI G +RI FM+R RCRE+L G +T +NIK A LRA I+HEI G FEY R F Sbjct: 18 TGIEIHGGNLRIVFMWRRIRCRESL-GLPVTKANIKHAALLRAAILHEIKLGTFEYGRHF 76 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISH 125 P S + + L + + +K ++T T +K + ++ Sbjct: 77 PNSKHATNYSNAKDER-LEALAERYKPLKAIDITPMTEEKYAYAIDICVALVGGDRLAGI 135 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 + DI R L+ R T ++Y+A L + + + Sbjct: 136 LLPEDIHVLRARLIET--------------RAPSTANHYLATFAGFLTWCESNNYCMAGL 181 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALME--SEKGQSQNLWKFAVYSGLRHGELAALAWEDV 243 + + +PDPL+ EF+ L+ Q AVY+GLR GEL ALA ED+ Sbjct: 182 AGACTRFAMSDKEPDPLTHDEFDLLISNGCLHPQDAAAITLAVYTGLRPGELCALAVEDI 241 Query: 244 DLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYH 303 +L+ G + + R +T F PKT RTV L++PALEA + ++ +H K +I Y Sbjct: 242 NLQAGKIEITRAITADGSFKTPKTGK-PRTVLLMEPALEACRTLLEIVMNHPKRDIRVYQ 300 Query: 304 REYGRTEKQKLHFVFMPRVCNGKQ-KPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFA 362 + E + + ++ ++ +W A +RAGIR R PY TRHT+A Sbjct: 301 NRHEWREISVTPLLSPSTQARKRGINEWFVSTAWNTKWAAIQRRAGIRPRRPYQTRHTYA 360 Query: 363 CWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS 411 CW LTA N AFIA QMGH+ M+ E+Y W+D +DE++ + +S Sbjct: 361 CWCLTARGNLAFIAKQMGHKDFTMLVEVYAKWMDSESDEELTRIWEGIS 409 >UniRef50_A5KPC6 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A5KPC6_9FIRM Length = 400 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 65/423 (15%), Positives = 122/423 (28%), Gaps = 74/423 (17%) Query: 2 SKLPTGVEIR-GRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFE 60 +L G+ R F + T + ++ +E Sbjct: 8 KELGKGISQRADGRYIARFTSK-------------TGKRKTLYDFKLNELKRKLREAVYE 54 Query: 61 YLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKET-ELTTNTMKKTKSQLKTLRIIICE 119 + T WT++ + + T+ K S Sbjct: 55 DE---------HGLNGNGESITLNAWYVTWTELYKKKTVKMTTIYKNHSYYNARVKNSIG 105 Query: 120 STPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSG 179 + I+ + + NEL+ G TV N +L + A S Sbjct: 106 KMYLQDIKTYHVQKFINELIDS-------------GLAHGTVSNIRFMLSDMFDKAVLSE 152 Query: 180 FISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQ-NLWKFAVYSGLRHGELAAL 238 +I P V+ + + + L++ E N+ KFAV +G R GE+ L Sbjct: 153 YIRKNPCIAVEMPPKVKKERRVLTREEQKKFFTFASSYIHINVLKFAVTTGCRIGEVLGL 212 Query: 239 AWEDVDLEKGIVNVRRNLTILD----------MFGPPKTNAGIRTVTLLQPALEALKEQY 288 WED D EK + + + + + KT + R + + E L+ Q Sbjct: 213 KWEDCDFEKREITINKTIHYSKASSPVEGSKFFYTTAKTISSNRVIPMTDEVYEILQNQK 272 Query: 289 KLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAG 348 + + R + K+ + VF ++ + V + Sbjct: 273 IKQTEQKM-----WKRSIWKQHKEFQNLVFTCS-----DGSPVYYYNVNSAIKDYVAKIN 322 Query: 349 I------------RRR----NPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG 392 + + + RHT+A G + + +GH T M ++Y Sbjct: 323 VIEIELAKEEKREPKIFELFTCHTLRHTYATRCYENGVDQQVVQKLLGHSTLAMTTDLYT 382 Query: 393 MWI 395 Sbjct: 383 HVS 385 >UniRef50_C6VKZ1 Prophage Lp4 protein 1, integrase n=1 Tax=Lactobacillus plantarum JDM1 RepID=C6VKZ1_LACPJ Length = 385 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 117/362 (32%), Gaps = 57/362 (15%) Query: 70 TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYS 129 TF E+ ++W K + + +T+ + + K I+ I + Sbjct: 60 RKNNPAAIMDNPTFDEVYEVWLKTYKLGVKESTLNRVEGIFKHHITPSFGGMRINTITWQ 119 Query: 130 DILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV 189 + +V+ + + R A + G I+T P + V Sbjct: 120 KCQEEALKWRE----------------SVKQFNKLAQYAALVFRTAQKMGVITTNPMKLV 163 Query: 190 KKLQ------RNRIKPDPLSKTEFNALMESE----------KGQSQNLWKFAVYSGLRHG 233 + +++ + + + + + L+ +G+R G Sbjct: 164 DVPKIAVDYSKDKAADNFWTAEQLATFLAVVDATDGHRTQPRYDRSALFYLLATTGMRKG 223 Query: 234 ELAALAWEDVDLEKGIVNVRRNLTIL----DMFGPPKTNAGIRTVTLLQPALEALKEQYK 289 E AL W D+DL+ G+V + + ++ + PKT RT++L ++ LK+ K Sbjct: 224 EALALTWSDIDLKNGLVTINKTISRSIDNHQIISTPKTRNAYRTLSLNSSTIDRLKKYRK 283 Query: 290 LTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGI 349 + +F ++ SV + A + + Sbjct: 284 S----------------LVVIPRAKDLIFTN-----QKGQIMSVMTPNHWLEALIGETDL 322 Query: 350 RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + RHTFA + N + QMGH ++ IY Q+ ++ Sbjct: 323 PTITVHGLRHTFASIQVANNINVKALQMQMGHSDIKITLNIYAHLSQQELSAQVYDMSKI 382 Query: 410 LS 411 L+ Sbjct: 383 LA 384 >UniRef50_D1VST0 Phage integrase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VST0_9FIRM Length = 360 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 69/405 (17%), Positives = 137/405 (33%), Gaps = 69/405 (17%) Query: 13 RYIRIWFMF---RGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSS 69 F + G+ ++ +G+ S K+A EY R F + Sbjct: 11 NKWYCSFRYVNLDGETKQKKKEGF----STKKEAD---------------EYERNFLNNI 51 Query: 70 TGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYS 129 F L ++ + + + +T+ + + + + IS I Sbjct: 52 KF------NPEMNFKSLYKMYLEDMKPRIKEHTLASKEYITENKILPYFKDMKISGIGSI 105 Query: 130 DILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGV 189 ++ ++N LL + K + L ++ +A + + P V Sbjct: 106 EVQRWQNLLLQAKNP------KTNKPYAPTYLKTINNQLTAIFNYAVKFHNLKNNPVHKV 159 Query: 190 -KKLQRNRIKPDPLSKTEFNALMESEKGQSQNL-WKFAVYSGLRHGELAALAWEDVDLEK 247 ++N + + S EFN + + ++ +L + +SG R GEL AL W D+D + Sbjct: 160 GTIGEKNAPEKEIWSIEEFNEFINLVEDKTLHLGFNILYWSGCRIGELLALTWNDIDFKN 219 Query: 248 GIVNVRRNLTI---LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 I+N+ ++ D+ PKT IR +T++ ++ ++ KL + F Sbjct: 220 NIINIDKSYQRLNCKDVITEPKTKKSIRKITVVSDVIKEIESYKKLFYKPGDDDRIFNC- 278 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW 364 + KR ++R + RH+ A Sbjct: 279 ---------------------------TKHKFEHAIINICKRNNLKRIRIHDLRHSHASL 311 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND--EQIAMLN 407 LL G N ++ ++GHE Y I + + L+ Sbjct: 312 LLNEGINIVALSKRLGHEKVSTTLNTYSHMIPSEDKILNVMEKLS 356 >UniRef50_C2KIC3 Bacteriophage integrase n=2 Tax=Leuconostoc mesenteroides subsp. cremoris ATCC 19254 RepID=C2KIC3_LEUMC Length = 375 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 75/419 (17%), Positives = 134/419 (31%), Gaps = 73/419 (17%) Query: 10 IRGRYI----RIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 G+ I G + R +G++ + + A + F Sbjct: 9 KHGKVYEVVGYIGRHQDGTQARAKKRGFD----SKRSAQQWFN-----------NEVALF 53 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISH 125 + TT + T EL D+W + + + +T+ KT + I T ++ Sbjct: 54 SNGQSKYNKKTTPNVMTVKELYDMWLETYQHTVEESTLNKTMNVFNVHIIPAWGDTHVTD 113 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 I+ D+ Y N + Y L LL A + I P Sbjct: 114 IKPLDLQRYINTMQGKILHY----------------RKITGYLRRLLNIAVRMDMIPVDP 157 Query: 186 FEGVKKLQRNR---IKPDPLSKTEFNALMESEKGQS-------QNLWKFAVYSGLRHGEL 235 F ++ + R + + EF A +E Q L + +G+R EL Sbjct: 158 FTKIEMPKERRQVNKRKQFMDVDEFKAFLEVLDSQYKYINQQAYTLLRLGALTGMRTEEL 217 Query: 236 AALAWEDVDLEKGIVNVRRNLTI----LDMFGPPKTNAGIRTVTLLQPALEALKEQYKLT 291 AL WE VD G +++ + L PK+ RT+ + L L + Y++ Sbjct: 218 LALQWEQVDFNGGYISIVQALGRGFNGGTYIKAPKSQTSKRTLKIDNKMLAVLSDWYEV- 276 Query: 292 GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR- 350 FVF + + + + G+ Sbjct: 277 ----------------SHYNSNDDFVFNNQGKTLQVMRP------NKWLHDVSDKYGVAV 314 Query: 351 RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNAR 409 + + RHT+A L GA+ + + +GH M ++Y +DE +L+ Sbjct: 315 GLSMHKLRHTWATLALDQGASVKQVQTYLGHADVSMTLDVYSDITKRASDETGNILSKL 373 >UniRef50_A9BYB6 Integrase family protein n=2 Tax=Comamonadaceae RepID=A9BYB6_DELAS Length = 375 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 109/408 (26%), Positives = 174/408 (42%), Gaps = 48/408 (11%) Query: 6 TGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRF 65 GV +R +Y++I G RE L+ + T +NI+ A +RA I+ +I G F F Sbjct: 2 PGVIVRDKYLQIDLRAHGF-GRERLE-LQPTPANIRHAERMRAEILGKIERGTFVLGDYF 59 Query: 66 PQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISH 125 P S V + T G+L W +K+ EL +T+ + + + Sbjct: 60 PDSPRARADVPS---MTVGQLFGEWLDVKKPELQHSTIHSYQQTIDSY------------ 104 Query: 126 IRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKP 185 R +L+ T + +T +N ++L +L + Y++ ++ Sbjct: 105 ----HFDGVRRDLVGNFTFRSLKRLLARLPANPKTFNNVASVLRQVLEYGYKAKILTEPL 160 Query: 186 FEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS-QNLWKFAVYSGLRHGELAALAWEDVD 244 E ++ +R + +PDP + E L+ K ++ +N ++FA +SGLR EL AL W VD Sbjct: 161 HESIEMRRRQKPEPDPFTLDEVEVLLSKMKAEAARNYFEFAFFSGLRPSELIALTWSKVD 220 Query: 245 LEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHR 304 L G V V LT KT + +R V L A +AL+ Q K Sbjct: 221 LRSGTVMVDSALTR-GRVKGTKT-SEVRKVELPGRARDALERQRK--------------- 263 Query: 305 EYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACW 364 + VF+ + + S W A+K +GIR R+ TRHT+A Sbjct: 264 ----VSQLAGGRVFLTVAGGELENTDMPLDS---WWKPAMKVSGIRHRDARQTRHTYATM 316 Query: 365 LLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIA-MLNARLS 411 +L AG PA+ A QMGH +M Y WID + L++ +S Sbjct: 317 MLMAGVTPAYAARQMGHG-IEMFLRTYSKWIDGADKGAEQRKLDSFIS 363 >UniRef50_C7GI02 Site-specific recombinase, phage integrase family n=12 Tax=Bacteria RepID=C7GI02_9FIRM Length = 431 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 153/443 (34%), Gaps = 62/443 (13%) Query: 7 GVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFP 66 V +G+ F K T E S + LR+ Sbjct: 5 SVRKKGKKWYYRFYVEDASGNLVQKECVGT----------------ESKSETEKLLRQAM 48 Query: 67 QSSTGAKMVTTRVIKTFGELCDIWTKI--KETELTTNTMKKTKSQLKTLRIIICESTPIS 124 K V T G+L D+W + K L+ T++ ++ ++ + Sbjct: 49 DDYEKKKFVAKADNLTVGQLLDVWAEEELKTGTLSNGTVENYLGTIRNIKKHPLAERKLK 108 Query: 125 HIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAY-QSGFIST 183 ++ + ++ + L G +KG + + ++ A++ RFA +I+ Sbjct: 109 NVTSEHLQSFFDLLSFGGVHPDG---KERKGYSKDYIHSFSAVMQQSFRFAVFPKQYITF 165 Query: 184 KPFEGVKKLQRNRIKPD------------PLSKTEFNALMESEKGQSQNLWK---FAVYS 228 P + +K + + D P+S+ ++ L+ + ++ A Y+ Sbjct: 166 NPMQYIKL-RYQTDEVDLFSDEDMDGNVQPISREDYERLLAYLQKKNPAAILPIQIAYYA 224 Query: 229 GLRHGELAALAWEDVDLEKGIVNVRRNLTILD-----MFGPPKTNAGIRTVTLLQPALEA 283 GLR GE LAW+DV+LE+ + +RR++ + GP K +R V +E Sbjct: 225 GLRIGEACGLAWQDVNLEEQCLTIRRSIRYDGSKRKYIIGPTK-RKKVRVVDFGDTLVEI 283 Query: 284 LKEQYKLTGHHRKSEITFYHREYGRTEKQKL-----------------HFVFMPRVCNGK 326 + K +R YH Y + K+K + + VC Sbjct: 284 FRNARKEQLKNRMQYEELYHTNYYKEVKEKNRVYYEYYCLDRTQEVPADYKEISFVCLRP 343 Query: 327 QKPYYSVSSLGARWNAAVKRA-GIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQ 385 ++LG K G + + RHT+ LL GA P + +GH Sbjct: 344 DGCLELPTTLGTVCRKVAKALEGFEGFHFHQLRHTYTSNLLANGAAPKDVQELLGHSDVS 403 Query: 386 MVYEIYGMWIDDMNDEQIAMLNA 408 +Y D + + +L+ Sbjct: 404 TTMNVYAHSTRDAKRKSVRLLDK 426 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.170 0.528 Lambda K H 0.267 0.0522 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,693,854,269 Number of Sequences: 3077464 Number of extensions: 131189037 Number of successful extensions: 419174 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 6934 Number of HSP's successfully gapped in prelim test: 4857 Number of HSP's that attempted gapping in prelim test: 383313 Number of HSP's gapped (non-prelim): 14686 length of query: 411 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 280 effective length of database: 637,248,572 effective search space: 178429600160 effective search space used: 178429600160 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 95 (40.9 bits)