 |
| Job Description | P76056 | | Confidence | 6.17% | Date | Wed Jan 25 15:21:05 GMT 2012 |
| Rank | 98 | Aligned Residues | 35 |
| % Identity | 17% | Template | c3adiC_ |
| PDB info |
PDB header:gene regulation/rna | Chain: C: PDB Molecule:f21m12.9 protein; |
PDBTitle: structure of arabidopsis hyl1 and its molecular implications for mirna2 processing
|
| Resolution | 3.20 Å |
|
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | G | R | Y | I | R | I | W | F | M | F | R | G | K | R | C | R | E | T | L | K | G | W | E | I | T | N | S | N | I | K | K | A | G | N | L | R | A | L | I |
| Query Conservation |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   | . | . | . | . | . |   |
|
|
|   |
|
|   |   |
|
|   |   |
| Template Sequence |   |
H | K | S | L | F | Q | S | T | V | I | L | D | G | V | R | Y | N | S | L | P | G | F | . |
. |
. |
. |
. |
F | N | R | K | A | A | E | Q | S | A | A | E | V |
| Template Known Secondary structure |   |
T | S |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |
|
| S |
| B | . | . | . | . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|