 |
| Job Description | P0AAV0 | | Confidence | 1.54% | Date | Thu Jan 5 11:13:54 GMT 2012 |
| Rank | 87 | Aligned Residues | 10 |
| % Identity | 30% | Template | c3g9rF_ |
| PDB info |
PDB header:viral protein | Chain: F: PDB Molecule:fusion complex of hiv-1 envelope glycoprotein |
PDBTitle: structure of the hiv-1 gp41 membrane-proximal ectodomain2 region in a putative prefusion conformation
|
| Resolution | 2.00 Å |
|
|   |   |
68 | . | 70 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
F | R | P | Q | K | V | L | W | Q | G |
| Query Conservation |   |
|   |
|
|   |
|   |
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |
|
|
|
|
|
| Template Sequence |   |
F | N | I | T | N | W | L | W | Y | I |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
12 | . | . | . | . | . | . | . | 20 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|