57 c1ni5A_ Probab=98.01   E-value=0.00012  Score=49.07  Aligned_columns=117  Identities=12%

Q ss_pred             HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf             99997216980899824884358999999873012333332334556675314411899997899999999809960999
Q batch____       219 SVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEI  298 (554)
Q Consensus       219 AV~~rl~sd~pvgv~LSGGLDSS~Iaala~~~~~~~~~~~~~~~~~~~~~~tfsig~~~~~D~~~A~~vA~~lg~~h~~i  298 (554)
                      ...+.+....+|.+.+|||.||.+++.++.+...+.........-.+..++..+..     |.++++..|+.+|++++.+
T Consensus         5 ~~~~~~~~~~~vlva~SGG~DS~~Ll~~l~~~~~~~~~~~l~~~hvdhglr~~s~~-----~~~~v~~~~~~~~i~~~~~   79 (433)
T c1ni5A_           5 TLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADA-----WVTHCENVCQQWQVPLVVE   79 (433)
T ss_dssp             HHHHHHTTCSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHH-----HHHHHHHHHHHTTCCEEEE
T ss_pred             HHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHH-----HHHHHHHHHHHCCCCEEEE
T ss_conf             45217689977999967971179999999998420489669999967588828588-----8999999999709968999


Q ss_pred             ECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHH
Q ss_conf             87978999999999997148787643026999999999996798499918782134
Q batch____       299 HFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEV  354 (554)
Q Consensus       299 ~~~~~e~~~~l~~~i~~le~p~~~~~~~s~~~~~l~~~a~~~g~kViLsGeGaDEl  354 (554)
                      .++              .+......-..+-..-..+-.....+..++++|+..|..
T Consensus        80 ~~~--------------~~~~~~~~e~~aR~~Ry~~~~~~~~~~~~i~~aH~~dD~  121 (433)
T c1ni5A_          80 RVQ--------------LAQEGLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQ  121 (433)
T ss_dssp             CCC--------------CCCSSSTTTTHHHHHHHHHHHHTCCTTEEEECCCCHHHH
T ss_pred             EEE--------------CCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHH
T ss_conf             965--------------054688998999999999999998609849994043578