Email l.a.kelley@imperial.ac.uk Description P0A8I3 Date Thu Jan 5 11:07:54 GMT 2012 Unique Job ID 9c3777e0b9be5303

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2aq0a1 71.4 16 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 2 d2ovra1 35.2 14 Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like 3 c1kftA_ 31.6 19 PDB header:dna binding protein Chain: A: PDB Molecule:excinuclease abc subunit c; PDBTitle: solution structure of the c-terminal domain of uvrc from e-2 coli 4 d1kfta_ 31.6 19 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Excinuclease UvrC C-terminal domain 5 d1nexa1 30.5 18 Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like 6 c2p1nD_ 28.9 17 PDB header:signaling protein Chain: D: PDB Molecule:skp1-like protein 1a; PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase 7 d1bd0a2 27.0 26 Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain 8 c2ovqA_ 26.9 14 PDB header:transcription/cell cycle Chain: A: PDB Molecule:s-phase kinase-associated protein 1a; PDBTitle: structure of the skp1-fbw7-cyclinedegc complex 9 d1fsea_ 26.0 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:GerE-like (LuxR/UhpA family of transcriptional regulators) 10 c1nexC_ 25.6 17 PDB header:ligase, cell cycle Chain: C: PDB Molecule:centromere dna-binding protein complex cbf3 PDBTitle: crystal structure of scskp1-sccdc4-cpd peptide complex 11 d1x2ia1 22.5 9 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 12 c2rjpC_ 20.3 12 PDB header:hydrolase Chain: C: PDB Molecule:adamts-4; PDBTitle: crystal structure of adamts4 with inhibitor bound 13 c2kc2A_ 19.3 20 PDB header:structural protein Chain: A: PDB Molecule:talin-1; PDBTitle: nmr structure of the f1 domain (residues 86-202) of the2 talin 14 c3ieiD_ 18.6 12 PDB header:transferase Chain: D: PDB Molecule:leucine carboxyl methyltransferase 1; PDBTitle: crystal structure of human leucine carboxylmethyltransferase-1 in2 complex with s-adenosyl homocysteine 15 d2bgwa1 18.0 16 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 16 c3mntA_ 17.9 11 PDB header:transferase Chain: A: PDB Molecule:leucine carboxyl methyltransferase 1; PDBTitle: crystal structure of human leucine carboxyl methyltransferase 1 17 d1rjda_ 17.8 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Leucine carboxy methyltransferase Ppm1 18 d2fm9a1 16.3 14 Fold:SipA N-terminal domain-like Superfamily:SipA N-terminal domain-like Family:SipA N-terminal domain-like 19 c2yfvC_ 15.7 28 PDB header:cell cycle Chain: C: PDB Molecule:scm3; PDBTitle: the heterotrimeric complex of kluyveromyces lactis scm3, cse4 and h4 20 d2fm8c1 15.7 14 Fold:SipA N-terminal domain-like Superfamily:SipA N-terminal domain-like Family:SipA N-terminal domain-like 21 c1wcnA_ not modelled 15.3 9 PDB header:rna-binding protein Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: nmr structure of the carboxyterminal domains of escherichia2 coli nusa 22 d2a1jb1 not modelled 15.2 6 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 23 d1fs2b1 not modelled 14.0 17 Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like 24 d1k78a1 not modelled 13.8 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 25 d1rcqa2 not modelled 13.7 24 Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain 26 c2bhnD_ not modelled 12.3 16 PDB header:hydrolase Chain: D: PDB Molecule:xpf endonuclease; PDBTitle: xpf from aeropyrum pernix 27 d6paxa1 not modelled 12.0 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 28 c2k9lA_ not modelled 11.6 14 PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: structure of the core binding domain of sigma54 29 c2pfcA_ not modelled 10.8 21 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein rv0098/mt0107; PDBTitle: structure of mycobacterium tuberculosis rv0098 30 d2i1qa1 not modelled 10.1 18 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:DNA repair protein Rad51, N-terminal domain 31 d2cg4a1 not modelled 9.6 3 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 32 c2lfcA_ not modelled 9.4 4 PDB header:oxidoreductase Chain: A: PDB Molecule:fumarate reductase, flavoprotein subunit; PDBTitle: solution nmr structure of fumarate reductase flavoprotein subunit from2 lactobacillus plantarum, northeast structural genomics consortium3 target lpr145j 33 d1pzna1 not modelled 7.8 12 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:DNA repair protein Rad51, N-terminal domain 34 d1lb2b_ not modelled 7.7 8 Fold:SAM domain-like Superfamily:C-terminal domain of RNA polymerase alpha subunit Family:C-terminal domain of RNA polymerase alpha subunit 35 c2o8xA_ not modelled 7.3 13 PDB header:transcription Chain: A: PDB Molecule:probable rna polymerase sigma-c factor; PDBTitle: crystal structure of the "-35 element" promoter recognition domain of2 mycobacterium tuberculosis sigc 36 c2g9pA_ not modelled 7.2 62 PDB header:antimicrobial protein Chain: A: PDB Molecule:antimicrobial peptide latarcin 2a; PDBTitle: nmr structure of a novel antimicrobial peptide, latarcin 2a,2 from spider (lachesana tarabaevi) venom 37 d1lvaa4 not modelled 6.7 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal fragment of elongation factor SelB 38 d1y0pa3 not modelled 6.5 15 Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 39 d1szpb1 not modelled 6.4 11 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:DNA repair protein Rad51, N-terminal domain 40 d1y0ua_ not modelled 6.3 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ArsR-like transcriptional regulators 41 c3ijrF_ not modelled 6.3 20 PDB header:oxidoreductase Chain: F: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: 2.05 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex3 with nad+ 42 c2wp0C_ not modelled 6.3 13 PDB header:dna binding protein Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: crystal structure of a hoba-dnaa (domain i-ii) complex from2 helicobacter pylori. 43 c1qqp4_ not modelled 6.3 56 PDB header:virus Chain: 4: PDB Molecule:protein (genome polyprotein); PDBTitle: foot-and-mouth disease virus/ oligosaccharide receptor complex. 44 d1cooa_ not modelled 6.2 8 Fold:SAM domain-like Superfamily:C-terminal domain of RNA polymerase alpha subunit Family:C-terminal domain of RNA polymerase alpha subunit 45 d2gwfa1 not modelled 6.1 8 Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Ubiquitin carboxyl-terminal hydrolase 8, USP8 46 c3k0bA_ not modelled 6.0 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted n6-adenine-specific dna methylase; PDBTitle: crystal structure of a predicted n6-adenine-specific dna methylase2 from listeria monocytogenes str. 4b f2365 47 c3g9kD_ not modelled 6.0 21 PDB header:hydrolase Chain: D: PDB Molecule:capsule biosynthesis protein capd; PDBTitle: crystal structure of bacillus anthracis transpeptidase enzyme capd 48 d1d4ca3 not modelled 6.0 4 Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 49 d1bmlc1 not modelled 5.9 25 Fold:beta-Grasp (ubiquitin-like) Superfamily:Staphylokinase/streptokinase Family:Staphylokinase/streptokinase 50 d1szpa1 not modelled 5.8 11 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:DNA repair protein Rad51, N-terminal domain 51 c1giqA_ not modelled 5.8 11 PDB header:toxin Chain: A: PDB Molecule:iota toxin component ia; PDBTitle: crystal structure of the enzymatic componet of iota-toxin2 from clostridium perfringens with nadh 52 c2nrzB_ not modelled 5.7 10 PDB header:hydrolase Chain: B: PDB Molecule:uvrabc system protein c; PDBTitle: crystal structure of the c-terminal half of uvrc bound to2 its catalytic divalent cation 53 d1l4db_ not modelled 5.7 25 Fold:beta-Grasp (ubiquitin-like) Superfamily:Staphylokinase/streptokinase Family:Staphylokinase/streptokinase 54 d1z3eb1 not modelled 5.6 11 Fold:SAM domain-like Superfamily:C-terminal domain of RNA polymerase alpha subunit Family:C-terminal domain of RNA polymerase alpha subunit 55 d1xsva_ not modelled 5.6 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:YlxM/p13-like 56 c3us8A_ not modelled 5.6 10 PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase [nadp]; PDBTitle: crystal structure of an isocitrate dehydrogenase from sinorhizobium2 meliloti 1021 57 c3bqsB_ not modelled 5.5 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from2 listeria monocytogenes, trigonal form 58 c2vswB_ not modelled 5.5 23 PDB header:hydrolase Chain: B: PDB Molecule:dual specificity protein phosphatase 16; PDBTitle: the structure of the rhodanese domain of the human dual2 specificity phosphatase 16 59 d1wc9a_ not modelled 5.4 16 Fold:Ligand-binding domain in the NO signalling and Golgi transport Superfamily:Ligand-binding domain in the NO signalling and Golgi transport Family:TRAPP components 60 d1vfsa2 not modelled 5.4 27 Fold:TIM beta/alpha-barrel Superfamily:PLP-binding barrel Family:Alanine racemase-like, N-terminal domain 61 d1l4zb_ not modelled 5.3 25 Fold:beta-Grasp (ubiquitin-like) Superfamily:Staphylokinase/streptokinase Family:Staphylokinase/streptokinase 62 d2e9xb2 not modelled 5.2 16 Fold:GINS/PriA/YqbF domain Superfamily:PriA/YqbF domain Family:PSF2 N-terminal domain-like 63 d1b22a_ not modelled 5.2 14 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:DNA repair protein Rad51, N-terminal domain 64 c1b22A_ not modelled 5.2 14 PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad51; PDBTitle: rad51 (n-terminal domain) 65 d1doqa_ not modelled 5.2 5 Fold:SAM domain-like Superfamily:C-terminal domain of RNA polymerase alpha subunit Family:C-terminal domain of RNA polymerase alpha subunit 66 d1a04a1 not modelled 5.1 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:GerE-like (LuxR/UhpA family of transcriptional regulators)