BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (302 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0ACH9 Melibiose operon regulatory protein n=109 Tax=Ga... 637 0.0 UniRef50_D0Z8I6 DNA-binding transcriptional dual regulator n=9 T... 390 e-107 UniRef50_Q65T74 AraC protein n=2 Tax=Gammaproteobacteria RepID=Q... 307 3e-82 UniRef50_C4L876 Transcriptional regulator, AraC family n=1 Tax=T... 263 5e-69 UniRef50_B8CMD7 Transcriptional regulator, AraC family n=1 Tax=S... 197 3e-49 UniRef50_A4BGH9 Regulator of melibiose operon n=1 Tax=Reinekea b... 196 8e-49 UniRef50_A8H314 Transcriptional regulator, AraC family n=4 Tax=S... 188 2e-46 UniRef50_B1ZNN6 Transcriptional regulator, AraC family n=1 Tax=O... 153 5e-36 UniRef50_B6A4E8 Transcriptional regulator, AraC family n=11 Tax=... 140 4e-32 UniRef50_C6B664 Transcriptional regulator, AraC family n=2 Tax=R... 140 5e-32 UniRef50_Q7US19 Melibiose operon regulatory protein n=1 Tax=Rhod... 137 4e-31 UniRef50_Q2S9E7 AraC-type DNA-binding domain-containing protein ... 137 5e-31 UniRef50_B5JCW6 Transcriptional regulator, AraC family protein n... 135 2e-30 UniRef50_B9JGQ4 Transcriptional regulator protein n=4 Tax=Rhizob... 131 3e-29 UniRef50_B9K1R2 Transcriptional regulator AraC family n=2 Tax=Ag... 127 4e-28 UniRef50_Q2S9F0 AraC-type DNA-binding domain-containing protein ... 125 1e-27 UniRef50_Q7UU63 Melibiose operon regulatory protein n=1 Tax=Rhod... 125 1e-27 UniRef50_Q2CBW0 Regulatory protein n=1 Tax=Oceanicola granulosus... 125 2e-27 UniRef50_B3C996 Putative uncharacterized protein n=1 Tax=Bactero... 117 4e-25 UniRef50_B3CFU1 Putative uncharacterized protein n=2 Tax=Bactero... 117 5e-25 UniRef50_A3I1S3 Melibiose operon regulatory protein n=1 Tax=Algo... 116 1e-24 UniRef50_Q2SQF1 AraC-type DNA-binding domain-containing protein ... 115 1e-24 UniRef50_B6A065 Transcriptional regulator, AraC family n=1 Tax=R... 114 3e-24 UniRef50_Q2CK10 Regulator of melibiose operon n=1 Tax=Oceanicola... 113 8e-24 UniRef50_B6QZ43 AraC protein, putative n=1 Tax=Pseudovibrio sp. ... 112 2e-23 UniRef50_C7MHG0 Response regulator containing CheY-like receiver... 111 3e-23 UniRef50_C0A1S6 Transcriptional regulator, AraC family n=1 Tax=O... 105 1e-21 UniRef50_A6WDN9 Helix-turn-helix-domain containing protein AraC ... 103 7e-21 UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=C... 92 3e-17 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 90 1e-16 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 84 8e-15 UniRef50_UPI0001C35ADD AraC family transcriptional regulator n=1... 83 1e-14 UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=C... 83 1e-14 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 82 2e-14 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 81 4e-14 UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostri... 80 9e-14 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 79 2e-13 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 79 2e-13 UniRef50_A6TX25 Helix-turn-helix-domain containing protein, AraC... 78 3e-13 UniRef50_A8ML53 Transcriptional regulator, AraC family n=1 Tax=A... 78 4e-13 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 77 5e-13 UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus s... 77 7e-13 UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostri... 77 8e-13 UniRef50_C9RT55 Two component transcriptional regulator, AraC fa... 76 1e-12 UniRef50_Q1ZA51 Regulator of melibiose operon n=1 Tax=Photobacte... 76 1e-12 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 76 1e-12 UniRef50_C6CZY9 Transcriptional regulator, AraC family n=1 Tax=P... 76 1e-12 UniRef50_C6CWB0 Two component transcriptional regulator, AraC fa... 75 2e-12 UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=... 75 3e-12 UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=C... 75 4e-12 UniRef50_C6CV07 Two component transcriptional regulator, AraC fa... 75 4e-12 UniRef50_C5ERJ4 Two component transcriptional regulator n=1 Tax=... 75 4e-12 UniRef50_B0A945 Putative uncharacterized protein n=1 Tax=Clostri... 74 4e-12 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 74 5e-12 UniRef50_B0A7Q6 Putative uncharacterized protein n=1 Tax=Clostri... 74 7e-12 UniRef50_UPI00017885E1 two component transcriptional regulator, ... 74 7e-12 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 74 8e-12 UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=C... 74 9e-12 UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=C... 74 9e-12 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 73 9e-12 UniRef50_UPI000178A094 transcriptional regulator, AraC family n=... 73 1e-11 UniRef50_UPI0001C3592F AraC-like transcriptional regulator n=1 T... 73 1e-11 UniRef50_B2V102 AraC-family transcriptional regulator n=2 Tax=Cl... 73 1e-11 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 73 1e-11 UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=B... 73 1e-11 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 73 1e-11 UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC... 73 1e-11 UniRef50_A8VRA4 Response regulator receiver protein n=1 Tax=Baci... 73 1e-11 UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostri... 73 2e-11 UniRef50_C4Z0X2 Two-component system, response regulator YesN n=... 72 2e-11 UniRef50_C8ZWG4 Transcriptional regulator n=1 Tax=Enterococcus g... 72 2e-11 UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillu... 72 2e-11 UniRef50_A5Z5Z2 Putative uncharacterized protein n=1 Tax=Eubacte... 72 2e-11 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 72 2e-11 UniRef50_B8FYL7 Transcriptional regulator, AraC family n=2 Tax=D... 72 2e-11 UniRef50_C7IHS7 Transcriptional regulator, AraC family n=1 Tax=C... 72 3e-11 UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=B... 72 3e-11 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 72 3e-11 UniRef50_C0CGQ4 Putative uncharacterized protein n=1 Tax=Blautia... 72 3e-11 UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1... 72 3e-11 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 72 3e-11 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 72 3e-11 UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=B... 72 3e-11 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 71 4e-11 UniRef50_A9AYE0 Transcriptional regulator, AraC family n=1 Tax=H... 71 4e-11 UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptoco... 71 4e-11 UniRef50_C0AC00 AraC-type DNA-binding domain-containing protein-... 71 4e-11 UniRef50_C6CT66 Two component transcriptional regulator, AraC fa... 71 4e-11 UniRef50_B0G4U8 Putative uncharacterized protein n=2 Tax=Clostri... 71 4e-11 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 71 4e-11 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 71 4e-11 UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Cl... 71 5e-11 UniRef50_C6D6L1 Transcriptional regulator, AraC family n=1 Tax=P... 71 5e-11 UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminoc... 71 5e-11 UniRef50_C0ZBN7 Probable transcriptional regulator n=1 Tax=Brevi... 71 5e-11 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 71 5e-11 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 71 6e-11 UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 71 6e-11 UniRef50_UPI0001C36B1C two component transcriptional regulator, ... 71 6e-11 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 70 6e-11 UniRef50_A5KIY6 Putative uncharacterized protein n=1 Tax=Ruminoc... 70 7e-11 UniRef50_UPI0001C36195 two component transcriptional regulator, ... 70 8e-11 UniRef50_B4AP12 Periplasmic binding protein n=1 Tax=Bacillus pum... 70 8e-11 UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryan... 70 8e-11 UniRef50_B6FT88 Putative uncharacterized protein n=1 Tax=Clostri... 70 8e-11 UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bactero... 70 8e-11 UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridiu... 70 8e-11 UniRef50_UPI0001789626 transcriptional regulator, AraC family n=... 70 9e-11 UniRef50_B7ANK3 Putative uncharacterized protein n=1 Tax=Bactero... 70 9e-11 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 70 1e-10 UniRef50_UPI0001C36BEF two component AraC family transcriptional... 70 1e-10 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 70 1e-10 UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi... 70 1e-10 UniRef50_B8I4H6 Transcriptional regulator, AraC family n=1 Tax=C... 70 1e-10 UniRef50_UPI0001C365B5 response regulator receiver protein n=1 T... 70 1e-10 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 70 1e-10 UniRef50_D2LZN1 Transcriptional regulator, AraC family n=1 Tax=B... 70 1e-10 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 69 1e-10 UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=B... 69 1e-10 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 69 1e-10 UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostri... 69 1e-10 UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulator... 69 2e-10 UniRef50_C3RI67 Transcriptional regulator n=2 Tax=Bacteria RepID... 69 2e-10 UniRef50_C9AKD6 AraC-type DNA-binding domain-containing protein ... 69 2e-10 UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=... 69 2e-10 UniRef50_Q8EPK8 Transcriptional regulator (AraC/XylS family) n=1... 69 2e-10 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 69 2e-10 UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostri... 69 2e-10 UniRef50_A6TTD1 Response regulator receiver protein n=3 Tax=Firm... 69 2e-10 UniRef50_B9MLQ2 Two component transcriptional regulator, AraC fa... 69 2e-10 UniRef50_C6J603 Transcriptional regulator n=5 Tax=Bacilli RepID=... 69 2e-10 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 69 2e-10 UniRef50_A5N731 Transcriptional regulator n=4 Tax=Clostridium Re... 69 2e-10 UniRef50_UPI00017F5E5C putative transcriptional regulator (parti... 69 2e-10 UniRef50_A9KIW7 Two component transcriptional regulator, AraC fa... 69 2e-10 UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=P... 69 2e-10 UniRef50_C5RC38 AraC family transcriptional regulator n=1 Tax=We... 69 2e-10 UniRef50_C6CTG8 Two component transcriptional regulator, AraC fa... 69 2e-10 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 69 2e-10 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 69 2e-10 UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostri... 69 2e-10 UniRef50_D1VVF4 Two-component response regulator n=1 Tax=Peptoni... 69 2e-10 UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=C... 69 3e-10 UniRef50_B6FQ86 Putative uncharacterized protein n=1 Tax=Clostri... 69 3e-10 UniRef50_A7KH24 NapR1 n=1 Tax=Streptomyces sp. CNQ525 RepID=A7KH... 69 3e-10 UniRef50_D1PQY0 DNA-binding response regulator, AraC family n=1 ... 69 3e-10 UniRef50_A6ANN7 Putative melibiose operon regulatory protein n=1... 69 3e-10 UniRef50_A5I0N6 AraC-family transcriptional regulator n=11 Tax=C... 69 3e-10 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 69 3e-10 UniRef50_C4FYZ2 Putative uncharacterized protein n=1 Tax=Abiotro... 69 3e-10 UniRef50_B8FUQ5 Transcriptional regulator, AraC family n=2 Tax=D... 69 3e-10 UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococ... 68 3e-10 UniRef50_A7B093 Putative uncharacterized protein n=1 Tax=Ruminoc... 68 3e-10 UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 T... 68 3e-10 UniRef50_A7B0G0 Putative uncharacterized protein n=1 Tax=Ruminoc... 68 3e-10 UniRef50_UPI0001C36481 AraC family transcriptional regulator n=1... 68 3e-10 UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 T... 68 3e-10 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 68 3e-10 UniRef50_B5CMC6 Putative uncharacterized protein n=1 Tax=Ruminoc... 68 4e-10 UniRef50_UPI000178819A transcriptional regulator, AraC family n=... 68 4e-10 UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID... 68 4e-10 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 68 4e-10 UniRef50_C5EPZ4 Two component transcriptional regulator n=3 Tax=... 68 4e-10 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 68 4e-10 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 68 4e-10 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 68 4e-10 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 68 4e-10 UniRef50_Q9KFT3 Methylphosphotriester-DNA alkyltransferase (AraC... 68 4e-10 UniRef50_C2BXH0 Response regulator n=1 Tax=Listeria grayi DSM 20... 68 4e-10 UniRef50_A4XGU9 Transcriptional regulator, AraC family n=2 Tax=C... 68 4e-10 UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=M... 68 5e-10 UniRef50_B2JAK3 Two component transcriptional regulator, AraC fa... 68 5e-10 UniRef50_A9KSI4 Two component transcriptional regulator, AraC fa... 68 5e-10 UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n... 68 5e-10 UniRef50_C7T9S5 Putative transcriptional regulator n=2 Tax=Lacto... 68 5e-10 UniRef50_UPI0001692E78 DNA-binding response regulator, AraC fami... 68 5e-10 UniRef50_Q8EL34 Hypothetical conserved protein n=1 Tax=Oceanobac... 68 5e-10 UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostri... 67 5e-10 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 67 5e-10 UniRef50_B0KTA0 Transcriptional regulator, AraC family n=2 Tax=P... 67 5e-10 UniRef50_C2CZA7 AraC family transcriptional regulator n=1 Tax=La... 67 5e-10 UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=S... 67 5e-10 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 67 5e-10 UniRef50_C4ZF62 Two-component sensor response regulator n=1 Tax=... 67 5e-10 UniRef50_C0EDZ9 Putative uncharacterized protein n=1 Tax=Clostri... 67 5e-10 UniRef50_B1B7W8 Transcriptional regulator, AraC family protein n... 67 6e-10 UniRef50_C6D143 Two component transcriptional regulator, AraC fa... 67 6e-10 UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostri... 67 6e-10 UniRef50_A8S1Z0 Putative uncharacterized protein n=1 Tax=Clostri... 67 6e-10 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 67 6e-10 UniRef50_C6D3S3 Two component transcriptional regulator, AraC fa... 67 6e-10 UniRef50_UPI0001B9ECBE transcriptional regulator, AraC family n=... 67 6e-10 UniRef50_A6LQ44 Helix-turn-helix-domain containing protein, AraC... 67 7e-10 UniRef50_A5ZM23 Putative uncharacterized protein n=1 Tax=Ruminoc... 67 7e-10 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 67 7e-10 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 67 7e-10 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 67 7e-10 UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=C... 67 7e-10 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 67 7e-10 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 67 8e-10 UniRef50_C6PQL0 Two component transcriptional regulator, AraC fa... 67 8e-10 UniRef50_C0C0Y1 Putative uncharacterized protein n=1 Tax=Clostri... 67 8e-10 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 67 8e-10 UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium re... 67 9e-10 UniRef50_A4XMF1 Two component transcriptional regulator, AraC fa... 67 9e-10 UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostri... 67 9e-10 UniRef50_C6D7J5 Two component transcriptional regulator, AraC fa... 67 9e-10 UniRef50_C9L911 Putative transcriptional regulator n=1 Tax=Blaut... 67 1e-09 UniRef50_C6D454 Two component transcriptional regulator, AraC fa... 67 1e-09 UniRef50_C6CXK7 Two component transcriptional regulator, AraC fa... 67 1e-09 UniRef50_UPI0001C3522D two-component system, response regulator ... 67 1e-09 UniRef50_A4Z280 Putative transcriptional regulator, AraC family ... 67 1e-09 UniRef50_A8RIR6 Putative uncharacterized protein n=1 Tax=Clostri... 67 1e-09 UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostri... 67 1e-09 UniRef50_UPI0001973339 hypothetical protein ClM62_17292 n=1 Tax=... 67 1e-09 UniRef50_C9L8L2 Transcriptional regulator, AraC family n=2 Tax=C... 67 1e-09 UniRef50_C5RF55 Transcriptional regulator, AraC family n=1 Tax=C... 67 1e-09 UniRef50_C0AAS5 AraC-type DNA-binding domain-containing protein-... 67 1e-09 UniRef50_C5RJU1 Two component transcriptional regulator, AraC fa... 67 1e-09 UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B... 66 1e-09 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 66 1e-09 UniRef50_D1PQV2 Putative two-component response regulator n=1 Ta... 66 1e-09 UniRef50_A4XIH8 Transcriptional regulator, AraC family n=1 Tax=C... 66 1e-09 UniRef50_C9A7I8 Transcriptional regulator n=4 Tax=Enterococcus R... 66 1e-09 UniRef50_Q5WIX4 AraC/XylS family transcriptional regulator n=1 T... 66 2e-09 UniRef50_C6CRZ9 Two component transcriptional regulator, AraC fa... 66 2e-09 UniRef50_B9YDR3 Putative uncharacterized protein n=1 Tax=Holdema... 66 2e-09 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 66 2e-09 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 66 2e-09 UniRef50_C6CXM1 Transcriptional regulator, AraC family n=2 Tax=P... 66 2e-09 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 66 2e-09 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 66 2e-09 UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C... 66 2e-09 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 66 2e-09 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 65 2e-09 UniRef50_A8VRA2 Methyl-accepting chemotaxis sensory transducer n... 65 2e-09 UniRef50_UPI0001788F31 transcriptional regulator, AraC family n=... 65 2e-09 UniRef50_C0D789 Putative uncharacterized protein n=1 Tax=Clostri... 65 2e-09 UniRef50_UPI00017884AA transcriptional regulator, AraC family n=... 65 2e-09 UniRef50_A9KR90 Transcriptional regulator, AraC family n=1 Tax=C... 65 2e-09 UniRef50_B4WW69 Transcriptional regulator, AraC family protein n... 65 2e-09 UniRef50_Q21A44 Two component transcriptional regulator, AraC fa... 65 2e-09 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 65 2e-09 UniRef50_Q4ZTP2 Helix-turn-helix, AraC type n=23 Tax=Bacteria Re... 65 2e-09 UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1... 65 2e-09 UniRef50_C6CWR9 Two component transcriptional regulator, AraC fa... 65 2e-09 UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Diali... 65 2e-09 UniRef50_C0D4H9 Putative uncharacterized protein n=1 Tax=Clostri... 65 2e-09 UniRef50_C8P1S0 AraC family DNA-binding response regulator n=1 T... 65 2e-09 UniRef50_A4XN10 Transcriptional regulator, AraC family n=1 Tax=C... 65 2e-09 >UniRef50_P0ACH9 Melibiose operon regulatory protein n=109 Tax=Gammaproteobacteria RepID=MELR_ECOL6 Length = 302 Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 302/302 (100%), Positives = 302/302 (100%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL Sbjct: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM Sbjct: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT Sbjct: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI Sbjct: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF Sbjct: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 Query: 301 PG 302 PG Sbjct: 301 PG 302 >UniRef50_D0Z8I6 DNA-binding transcriptional dual regulator n=9 Tax=Enterobacteriaceae RepID=D0Z8I6_EDWTE Length = 313 Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust. Identities = 180/291 (61%), Positives = 223/291 (76%), Gaps = 2/291 (0%) Query: 6 FMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEK 65 MC+S + Q SPL LY+E+QR+ I P M SHWH QVE+N+PFDG+++Y I++ Sbjct: 13 LMCNSTDPQPHSPLMLYTEHQRLTIALCPPQAMAASHWHAQVELNIPFDGEIDYRIHDRT 72 Query: 66 VNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSL 125 + I QGHI LFWACTPH+L D G C+SMA+ +LPMHLFL+WPLD L++H+THG V+ S Sbjct: 73 LRIPQGHIALFWACTPHRLVDPGRCRSMALLSLPMHLFLAWPLDPQLLSHITHGRVLTSA 132 Query: 126 ATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILV--NKTSRTHKN 183 +L+P E+ RWQQ+L SP Q+RQLA DEI LMLKRFSLSGW + + Sbjct: 133 HPARLTPVEIGRWQQDLQSPCPQMRQLASDEILLMLKRFSLSGWHAMQPGGDDPRAGSGQ 192 Query: 184 SVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAM 243 +SRHA FYV QML F A +YD+ALTI VA HV LNA+YAMG+FQRVMQ+T+KQYITAM Sbjct: 193 GLSRHALFYVGQMLTFTAAHYDRALTIEQVARHVGLNAHYAMGLFQRVMQMTLKQYITAM 252 Query: 244 RINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 RI+HVRALLSDTD+++LDIALTAGF SSSRFYSTF KY GMSPQQYR+L++ Sbjct: 253 RIHHVRALLSDTDRTVLDIALTAGFSSSSRFYSTFSKYTGMSPQQYRRLAR 303 >UniRef50_Q65T74 AraC protein n=2 Tax=Gammaproteobacteria RepID=Q65T74_MANSM Length = 360 Score = 307 bits (787), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 148/290 (51%), Positives = 195/290 (67%), Gaps = 1/290 (0%) Query: 3 TDTFMCSSDEKQTRSPLSLYSEYQRMEIEFR-APHIMPTSHWHGQVEVNVPFDGDVEYLI 61 T T + + SPLSL + + +E + P MP HWHG +E+N+PFD DVEY Sbjct: 29 TSTELADKSGSEIISPLSLSLDARPFNVEIQQPPGNMPAYHWHGHIEINIPFDDDVEYSF 88 Query: 62 NNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMV 121 N IN GHI++FWA PH+LTD C++MA+FN+P++ FLSW L ++LINH+THG++ Sbjct: 89 NEHSTLINAGHISIFWASIPHRLTDKHNCRTMAVFNIPVYQFLSWQLSQNLINHITHGII 148 Query: 122 IKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTH 181 I+S + +S FEV+RW+QEL + +L DEI LM+KR SL GW +L H Sbjct: 149 IQSKNPRLVSLFEVQRWEQELKLEDPNRHKLVYDEIQLMIKRVSLDGWLLLLEPPKKNNH 208 Query: 182 KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYIT 241 + S S+HAQ YV ML +IA +Y+ LT+ VA V LN NYAMG+FQ MQLT+KQYI Sbjct: 209 QLSGSKHAQNYVRTMLDYIANHYNAPLTVQSVANAVGLNTNYAMGLFQSAMQLTIKQYII 268 Query: 242 AMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 MRINH +ALLSDT++S+LDI+LT GF S SRFY F KY G+SP +YRK Sbjct: 269 MMRINHAKALLSDTNRSVLDISLTTGFSSMSRFYDNFLKYTGVSPNKYRK 318 >UniRef50_C4L876 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L876_TOLAT Length = 300 Score = 263 bits (672), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 123/274 (44%), Positives = 177/274 (64%) Query: 17 SPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLF 76 SPLS + + +EFR P MP HWH QVEVN+PF G V YLIN++ + + +GHI LF Sbjct: 8 SPLSWLQADEVLSVEFRQPGDMPGYHWHRQVEVNIPFGGPVRYLINDQLIQLPEGHIGLF 67 Query: 77 WACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVR 136 W PH+L + C M + N+P+ FL P+D L+N V HG V+ S A E+R Sbjct: 68 WGVIPHRLIECENCTQMGVINIPLSRFLGLPVDDLLLNKVLHGSVVISTAKDLFGSHELR 127 Query: 137 RWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQM 196 RW + + + QL +EI LM+KR ++SGWE +L + H ++ Y+ QM Sbjct: 128 RWHNDSLCHSHGLYQLMQEEITLMIKRVAVSGWEELLHTSPGKLHSLQMNERKIRYIQQM 187 Query: 197 LGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTD 256 L FIAE+Y +A+ +N+VA V+L+ NYAM +F++VM ++K +IT M++NH RALL++T+ Sbjct: 188 LSFIAEHYHEAIRVNEVAAKVQLHPNYAMNLFKQVMGYSIKDHITMMKVNHARALLAETN 247 Query: 257 KSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +SILDI+LT GF + SRFY +F K VG++P QYR Sbjct: 248 RSILDISLTTGFSAMSRFYESFHKLVGVTPHQYR 281 >UniRef50_B8CMD7 Transcriptional regulator, AraC family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CMD7_SHEPW Length = 302 Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 97/277 (35%), Positives = 153/277 (55%) Query: 14 QTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHI 73 + SPL + + P IMPTSHWHG +E+N F+ +YLIN + +++ +G + Sbjct: 11 KENSPLETQAHESNFGFQRHKPEIMPTSHWHGHIEINYLFNCSADYLINGKHISVPEGKM 70 Query: 74 TLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF 133 LFWA PHQ+ M +P++ FLSW + D I+++ HG V+ + Sbjct: 71 ILFWASIPHQMVAYEGDGEMVNIYIPLNAFLSWKMSNDFISNILHGEVLVAENLHASDKV 130 Query: 134 EVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV 193 + WQ +L + IDEI ++R S+ + +N+ S ++ Sbjct: 131 ITQLWQDDLQKKEIYLTMQVIDEIRNRIRRMSMESYSTFDLNRNSNKQDRKSLVSGLPHI 190 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 +L +IA+NYDQ +TI+DVA+ L+ NY M +FQ +M++++KQYI +R+ H +ALL Sbjct: 191 QTILKYIADNYDQKITIDDVAKLTGLHPNYVMKLFQGIMKISIKQYINQLRLQHAQALLV 250 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 DT+ +L+IAL AGF S SRFY F + M+P Q+R Sbjct: 251 DTNNPVLNIALEAGFGSISRFYDIFQREFNMTPLQFR 287 >UniRef50_A4BGH9 Regulator of melibiose operon n=1 Tax=Reinekea blandensis MED297 RepID=A4BGH9_9GAMM Length = 289 Score = 196 bits (498), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 7/265 (2%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 +E R P M +HWH +EVN+P+ VEY IN + + + H+ LFWA PHQLT+ G Sbjct: 24 VEEREPECMAQAHWHSHIEVNIPYGDGVEYDINGKFFRLPERHLGLFWAAIPHQLTNPGK 83 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 C+ M I +PM ++W + L + V+ S + ++RR E N ++ + Sbjct: 84 CREMFIAYIPMQTIIAWSQLQRLYRDIVSQAVLHSRVEYPMPIDQMRRLVDEFNRNDDAL 143 Query: 150 RQLAIDEIGLMLKRFSLSGW----EPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 + + DE+ LMLKR S G EP++ + S K + + ML FIA NY Sbjct: 144 KAVVNDELQLMLKRASAYGLEQLVEPVIDSDDSVKEKRTSQSQK---IQAMLEFIASNYK 200 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 Q + + DVAEHV L+ YAM +F+ ++ + MKQYI MR+ + LL DT++SI+DIALT Sbjct: 201 QPIAVTDVAEHVHLHPKYAMQMFKNLIGIPMKQYINRMRLMTAKDLLRDTERSIMDIALT 260 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYR 290 GF S++RFY F +Y +P+++R Sbjct: 261 VGFNSNNRFYIVFRQYEQCTPKEFR 285 >UniRef50_A8H314 Transcriptional regulator, AraC family n=4 Tax=Shewanella RepID=A8H314_SHEPA Length = 292 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 94/276 (34%), Positives = 157/276 (56%), Gaps = 2/276 (0%) Query: 17 SPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLF 76 SPL++ ++ + + + P +MP SHWHG +E+N FD +YLIN +++ + +G + +F Sbjct: 14 SPLAVQAQDTQFGLHRKKPAVMPHSHWHGHIEINYLFDCSADYLINGQEITVPEGRMIIF 73 Query: 77 WACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVR 136 WA PHQ+ + + +P+ FL+W L ++ + HG VI S + + Sbjct: 74 WASFPHQMVASRGDGELVNIYIPLQSFLTWMLPSSFVSQLLHGEVIVSDSLYACDKELTQ 133 Query: 137 RWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPI-LVNKTSRTHKNSVSRHAQFYVSQ 195 W+ ++ + I+EI ++R S+ + L N+ ++ V ++ Sbjct: 134 IWETDIKRNAPLLTSQVINEIRGRIRRMSIEDYSTFELANRVAKQEDKPVFGGLN-HIQT 192 Query: 196 MLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT 255 ML +IA+NYDQ +TI +V+ L+ NYAM +F RVM++++KQYI +R+ H +ALL DT Sbjct: 193 MLRYIADNYDQKITIENVSTSTGLHKNYAMKLFNRVMKVSIKQYINQLRLQHAQALLIDT 252 Query: 256 DKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +L+IAL AGF S SRFY F + GMSP ++R+ Sbjct: 253 QSPVLNIALEAGFGSVSRFYDIFQREFGMSPLEFRR 288 >UniRef50_B1ZNN6 Transcriptional regulator, AraC family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZNN6_OPITP Length = 287 Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 129/259 (49%), Gaps = 2/259 (0%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P MP H ++E+N+ G V YL+ KV I GH+T FWA PHQ+ D G Sbjct: 23 PSRMPRPDHHNELELNLLPGGSVTYLLGGRKVKIEAGHLTTFWAAIPHQVLDYGAAPDYF 82 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIK--SLATQQLSPFEVRRWQQELNSPNEQIRQL 152 + +P+ FL W L + + HG V+ S+A L RW +L+ + + + Sbjct: 83 VATIPLVWFLQWNLPPRFVQRILHGEVLADPSIALASLDHSLFTRWVGDLSHASPAVVRF 142 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 EI L R + + + R ++ V Q+ FIA Y + L I+D Sbjct: 143 VSLEIEARLLRLANALPDEPSATAPRRRARSVPEAGGLNRVEQIACFIARRYREKLRIDD 202 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 +A L+ NYAM +F+R T+ Y+T RI+H + LL +D+ I+D+AL +GF S S Sbjct: 203 IAAAAGLHPNYAMNLFRRTFGTTLGDYLTHHRISHAQRLLVTSDEKIIDVALVSGFTSLS 262 Query: 273 RFYSTFGKYVGMSPQQYRK 291 RF F + G SP++YR+ Sbjct: 263 RFNEAFRRACGCSPREYRR 281 >UniRef50_B6A4E8 Transcriptional regulator, AraC family n=11 Tax=Rhizobiaceae RepID=B6A4E8_RHILW Length = 306 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 76/257 (29%), Positives = 127/257 (49%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P +M HWH QVEVN G V Y +++ + +N G + LFW PHQ+ ++ A Sbjct: 35 PPVMAMPHWHAQVEVNYVIRGSVHYRMSDHEFRLNAGEMCLFWGGQPHQMDESSDDSLYA 94 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 +LP+ F L + + + G + + AT RW + NS N Q A+ Sbjct: 95 GAHLPLVYFFRLRLPISISSRLMKGETLLTSATDAADVDNFARWFRYANSGNPAKAQHAV 154 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 DE+ L ++R +L + + H+ V++M FIA N+ Q + D+A Sbjct: 155 DELLLRIERIALEPYSMTTSKTAVSLESDQPHPHSSRSVARMCDFIAANFLQDIDSVDIA 214 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 L+ YAM +F+R +T+ +Y+T +R++ +A+L ++L +A+ +GF S S F Sbjct: 215 RAADLHPKYAMNLFKRTTGMTLSKYVTLLRLSRAQAMLMSEGANVLQVAMDSGFGSISAF 274 Query: 275 YSTFGKYVGMSPQQYRK 291 +F GMSP +R+ Sbjct: 275 NKSFRHIAGMSPSDFRR 291 >UniRef50_C6B664 Transcriptional regulator, AraC family n=2 Tax=Rhizobium leguminosarum RepID=C6B664_RHILS Length = 288 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 2/272 (0%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 IE M HWH VE+N+ +G + YL N + + G + LFWA PHQ Sbjct: 19 IERHIADAMAAPHWHDHVELNLLMEGRMTYLFNGRQEQVEAGRLVLFWAAIPHQTIAVAE 78 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 + LP+ FL P+D+ + G + + + + RW++E + Sbjct: 79 NAPLVCLYLPLIDFLGLPVDRKARQSIMQGRFLAQANQETMDALTLPRWEKEWQFGSAAR 138 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 R+L ++E+ L ++R L E + N + S++ A +V ++ I Y ++ Sbjct: 139 RKLIVEEVRLRIRRLILDNAE--IDNSPTHVSPTSLAGQAVRHVELLIDLINTRYADPIS 196 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 + D+A+ +++ + A F++V+ +++ +Y+T RI LL+DT+ +L I GF Sbjct: 197 VADLAKLAEMHPSTANSAFRKVLGISVNEYLTRHRIARAMQLLTDTEDPVLQIGFDCGFG 256 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFP 301 SSSRFY F + G +P+ +R+ R P Sbjct: 257 SSSRFYEIFKERTGTTPRHFREAVNSRNTPAP 288 >UniRef50_Q7US19 Melibiose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7US19_RHOBA Length = 285 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 77/260 (29%), Positives = 132/260 (50%), Gaps = 18/260 (6%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P MP + H ++EVN G + YL+ + I+ G + LFWA PHQ+ + Sbjct: 34 PVAMPRADRHSEIEVNFLASGSLTYLVGGHRDTIHAGQMGLFWAAVPHQIVEFDGDDPYF 93 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 + LP++ F+ +D D++N G V+ S + +RW+ +L S + + + A Sbjct: 94 VVTLPLNEFMRSGIDADIVNRTLQGEVLISSVQDERDSASFQRWESDLASQDPALARAAQ 153 Query: 155 DEIGLMLKRF----SLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTI 210 EI L RF S+ G + + +S Q+ +IA ++ Q LT Sbjct: 154 LEIQARLLRFAHDKSIGGTGEPMEDLSS--------------ADQLACYIARHFHQPLTS 199 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 +A V L+ NYAM +F++ +++ +IT R++ + LL T++S+LD++L +GF+S Sbjct: 200 EAIANAVDLHPNYAMTLFRKTFGISITSFITQHRLSEAQRLLVTTNRSVLDVSLASGFQS 259 Query: 271 SSRFYSTFGKYVGMSPQQYR 290 SRF F K G SP+++R Sbjct: 260 LSRFNEVFRKACGCSPRKFR 279 >UniRef50_Q2S9E7 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S9E7_HAHCH Length = 284 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 135/265 (50%), Gaps = 6/265 (2%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 +E E P M T+H H +E+ + G VE L + + ++ G + + A HQ Sbjct: 17 LEGERHQPEAMATAHQHCHLEILILTRGKVEMLYGQQTMILSAGELLCYSALHFHQFGAV 76 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 F LP+ + L + + HG ++ + + RW EL + Sbjct: 77 SDDAVAYSFRLPLFALFNLQLSCGVKQQLFHGAPCRARCAGLVDDTMLARWVAELRLRDP 136 Query: 148 QIRQLAIDEIGLMLKR-FSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 + L +DEI L+L+R F + + P + VS+H + ML FI +NY Sbjct: 137 ALDDLILDEITLLLRRLFKDACFTPP-DQQIPGVSGLKVSQH----IPVMLQFINDNYHA 191 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 ++++ DVA+HV L+ N+AM +F++ + +++ +Y+TA+R++H R +L T + + IA + Sbjct: 192 SISVCDVADHVGLHKNFAMTLFKKTLGMSILEYLTALRVHHARRMLQYTGEQVTQIAYAS 251 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRK 291 GF S +RFY F KY G SPQ+YRK Sbjct: 252 GFSSVTRFYEVFAKYFGESPQKYRK 276 >UniRef50_B5JCW6 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCW6_9BACT Length = 290 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/261 (30%), Positives = 133/261 (50%), Gaps = 4/261 (1%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P M H +VE+N+ G V Y++ KVN+ G + FWA PHQ+ D G+ Sbjct: 23 PSPMGRPDHHNEVELNLMRSGWVSYMLGGAKVNLLAGDLGAFWASIPHQVIDYGSDTEYF 82 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVR--RWQQELNSPNEQIRQL 152 + +P FL + L + G +I +L+ R +W+Q+L + ++ + + Sbjct: 83 VVTIPFAWFLQFSLPNQFTQTLLKGTLITEPLNGKLTTESERFAQWEQDLANNRDESQDI 142 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNS--VSRHAQFYVSQMLGFIAENYDQALTI 210 + E+ L+R +L + L+ + T + ++ V Q+ IA+ Y + LT Sbjct: 143 VLLELQARLQRMALYAKQEKLITTSVDTLSPTSVIADGGLNKVEQIACLIAQRYLEPLTA 202 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 + + V L+ NYAM +F++ T+ YIT RI+H + LL TD+ ILDIA+ +GF + Sbjct: 203 ETIGQAVGLHPNYAMNLFKKTFGTTLVDYITNHRISHAQRLLVTTDQKILDIAMNSGFNT 262 Query: 271 SSRFYSTFGKYVGMSPQQYRK 291 SRF F + G +P++YRK Sbjct: 263 LSRFNEAFRRCCGFTPREYRK 283 >UniRef50_B9JGQ4 Transcriptional regulator protein n=4 Tax=Rhizobiales RepID=B9JGQ4_AGRRK Length = 312 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 128/259 (49%), Gaps = 5/259 (1%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P +M HWH QVE+N G V Y +N+ +V + G I LFW PHQ+ D+ A Sbjct: 33 PPLMAKPHWHAQVEINYIMRGTVHYRMNDHEVQLQAGDICLFWGGQPHQMDDSSEDSIYA 92 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 +LP+ F L D+ + G ++ + AT RW + S + A+ Sbjct: 93 GAHLPLVHFFRMRLPLDISGRLMRGQILVTSATDAADNENFARWHRYAVSGDPAKAGHAV 152 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQF--YVSQMLGFIAENYDQALTIND 212 E+ L L+R + +EP L+ R + H Q +++M FIA N+ + D Sbjct: 153 AELLLRLERIA---FEPYLMLPEKREPEMGGQVHPQSSRSLARMCDFIAGNFLHDIDTVD 209 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 +A+ L+ YAM +F++ +T+ +Y+ +R++ +A+L ++L +A+ +GF S S Sbjct: 210 IAKAADLHPKYAMNLFKKCTGMTLSKYVNLLRLSRAQAMLMRDGANVLQVAMDSGFGSIS 269 Query: 273 RFYSTFGKYVGMSPQQYRK 291 F +F GM+P +R+ Sbjct: 270 AFNKSFRHIAGMTPSDFRR 288 >UniRef50_B9K1R2 Transcriptional regulator AraC family n=2 Tax=Agrobacterium RepID=B9K1R2_AGRVS Length = 311 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 75/280 (26%), Positives = 125/280 (44%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQG 71 E+ PL ++ + + E M H H Q+E+N +G + Y + ++ I++G Sbjct: 19 ERDPAHPLVVFGDNRFCAGELLDVQKMAGPHMHSQIELNFVLEGSMTYWFDGRELTISEG 78 Query: 72 HITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLS 131 + LFW PHQ+ D +PM +FL + V G VI++L + Sbjct: 79 RLCLFWGMIPHQVIDRREGTRFICLYVPMSVFLGLASLSQFRDSVFRGAVIEALHLRAWD 138 Query: 132 PFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQF 191 RW+ EL +E ++ E+ L R GW + ++ Sbjct: 139 REIFLRWRDELLGGDEGDIEIVRSELTARLMRIERDGWRDLREQGSALASLGQRDAGWML 198 Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 +V +ML FI E+ ++ DV L+ NYAM +F+R + T+ Q I R++ ++L Sbjct: 199 HVEKMLRFIGEHAPDTISAEDVGRAAGLHPNYAMSLFKRAVGTTINQAIIRHRLDTAQSL 258 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 L +D I ++A +GF S S FY F + P QYR+ Sbjct: 259 LISSDMPITEVAYESGFGSLSTFYEAFQRRFMEKPVQYRR 298 >UniRef50_Q2S9F0 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S9F0_HAHCH Length = 287 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/261 (31%), Positives = 131/261 (50%), Gaps = 6/261 (2%) Query: 32 FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ 91 F P IM SH H +E+N+ G + ++ + G + F A HQ+ Sbjct: 26 FGEPEIMEGSHQHCHLEINILLSGALRLSYLDQLYELESGDVICFSALHRHQVVSADE-S 84 Query: 92 SMAIFNLPMHLFLSWPLDKDLINHV-THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIR 150 ++A+ L+ ++ H+ G +S AT LS V RW QEL + ++ Sbjct: 85 AVALQLRLPLFLLTDMCANEMFKHLLIRGTPYRSNATGLLSLDTVERWAQELRCMDGPLQ 144 Query: 151 QLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTI 210 L +DEI L L+R + P + + + SRH + M+ FI NY +TI Sbjct: 145 DLVLDEITLFLRRMIMR--NPCKSGQGAGCGEYR-SRHLH-HAHCMVDFINGNYRTPITI 200 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 DVA+ V L+ N+AM +F++ + +++ +Y+T +R+NH R LL + +++IA +GF S Sbjct: 201 ADVADGVGLHKNFAMSVFKKAVGMSVLEYLTDLRVNHARRLLLYSQDQVIEIAFASGFSS 260 Query: 271 SSRFYSTFGKYVGMSPQQYRK 291 +RFY F KY SP +YRK Sbjct: 261 VTRFYEVFAKYFNESPLKYRK 281 >UniRef50_Q7UU63 Melibiose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7UU63_RHOBA Length = 289 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/260 (28%), Positives = 122/260 (46%), Gaps = 3/260 (1%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P MP H ++E+N G + YLI ++ ++ +TLFWA PHQ+ + Sbjct: 23 PVPMPRPDRHDEIEINFLDSGSLTYLIGGNRITVDAHTLTLFWAAVPHQIIEFRDVTHYY 82 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLA---TQQLSPFEVRRWQQELNSPNEQIRQ 151 + +P FL W L + L + G V+ + T F +W +++ E R+ Sbjct: 83 VITIPFGWFLQWGLPESLQTQLILGNVLSGKSDPKTAVRDKFLFEQWHSDVSIDPEDTRE 142 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 + E+ L R + S ++ ++ R + S M IA N+ L I Sbjct: 143 FVLLELKARLLRLARSYFKNPALSSDDREARLRNSSPNLAKAELMACHIARNFKSRLQIK 202 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D+AE V L+ +YA +F++ LT+ IT R+ + LL ++ I+DIA AGF S Sbjct: 203 DIAECVDLHPDYASTLFRKTFGLTLNGLITRHRVAEAQRLLISSNDQIIDIAFAAGFDSL 262 Query: 272 SRFYSTFGKYVGMSPQQYRK 291 SRF F + GM+P+ +RK Sbjct: 263 SRFNRAFKETTGMTPRGFRK 282 >UniRef50_Q2CBW0 Regulatory protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CBW0_9RHOB Length = 294 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 10/261 (3%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P IMP HWH Q+E+N G ++Y + + +++ G I LFW PH+LTDTG Sbjct: 28 PGIMPAPHWHAQIEINYVERGALQYQMADHALSLPAGEIALFWGGLPHRLTDTGADTIYH 87 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 + +LP+ F L + + G V+ + R + L S N + AI Sbjct: 88 VIHLPLPHFFRLRLPPGVQRGLMTGAVLAAAGAPAEEEALFGRIRAYLASGNSRRAAHAI 147 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ----FYVSQMLGFIAENYDQALTI 210 DE+ L L+R +L EP ++ + +R A+ + ++ +A + + Sbjct: 148 DELLLRLERIAL---EP---HRLCGGRLGAAARGAEPGGHPALLRLFEAVAAVFRDEVRA 201 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 D+AE L+ YAM +F+R +++ Y+T +R++ ++ L + S+L+IAL AGF S Sbjct: 202 ADIAEAAGLHPKYAMSLFKRATGMSLADYVTLLRLSFAQSRLVADEASVLEIALDAGFGS 261 Query: 271 SSRFYSTFGKYVGMSPQQYRK 291 S F F + G +P YRK Sbjct: 262 VSAFNKAFRRQTGTTPTAYRK 282 >UniRef50_B3C996 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C996_9BACE Length = 282 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 22/286 (7%) Query: 11 DEKQTR-SPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNIN 69 DEK+ P L E R P +MP H ++E+N +G + Y KV + Sbjct: 11 DEKRDEFKPYGLTCEIWR-------PQLMPKIDRHNEIELNYIPEGGITYFFPTGKVTVP 63 Query: 70 QGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQ- 128 ITLFW PH++ + + + +P +LFL W L ++N + G V+ Sbjct: 64 PRKITLFWGLIPHKIIKSESDAPYFVVTIPFNLFLGWRLPSTIVNRILGGEVVVETVESE 123 Query: 129 -QLSPFEVRRWQQELNSP-NEQIRQLAIDEIGLML-KRFSLSGWEPILVNKTSRTHKNSV 185 +L RW ++ S N++ L I L L K S+S +P + + Sbjct: 124 CRLDKPMFERWVSDMASKQNQEAVSLEIQARILRLTKNMSVSEAKPTAILNPADAS---- 179 Query: 186 SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRI 245 + +++ +IA N+++ + I+D+ V L+ +YA IF++ T+ +Y+ RI Sbjct: 180 ------ILERIVVYIAHNHNRPIKISDIGRAVGLHPDYANAIFKKAFGCTLSRYVAEERI 233 Query: 246 NHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 V+ L TD SI IA GF S SRF +TF G +P+ YR+ Sbjct: 234 GQVKRKLILTDMSITQIAFECGFNSISRFNNTFFNICGQTPRCYRE 279 >UniRef50_B3CFU1 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B3CFU1_9BACE Length = 280 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 12/266 (4%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 + E P +MP H ++E+N G++ YL +NEK+ I T+FW PHQ+ Sbjct: 21 LTCEAWVPRVMPRYDRHNEIEINYLPQGNITYLRHNEKITIPNKRFTIFWGLIPHQIIHY 80 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQ--QLSPFEVRRWQQELNSP 145 + + +P FLSW L ++ + G ++ + Q F + W ++ + Sbjct: 81 ENVEKYYVCTIPFAHFLSWKLPAQFVDSLLRGDILYEQTDEYSQYDEFLLNNWLKD-SGV 139 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 N Q L + E+ + R + + S +++ + + ++ ++ +NY Sbjct: 140 NTQ-SGLVLLEMQTRITRMAH--------HLQSSDDSMALASYQTTLIEKITIYLTKNYC 190 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + ND+ + V L+ +YA IF++ T++ YI +RI H + L TD SI DIA Sbjct: 191 NDIKANDLGDAVGLHPDYANHIFKKAFGTTIRDYIAELRIAHAQRKLLTTDMSITDIAYE 250 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRK 291 GF S +RF +TF K + +P++Y+K Sbjct: 251 CGFNSIARFNATFFKKIQCTPREYKK 276 >UniRef50_A3I1S3 Melibiose operon regulatory protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I1S3_9SPHI Length = 254 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 126/253 (49%), Gaps = 16/253 (6%) Query: 44 HGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLF 103 H ++E+N + + YL +K+ I TLFWA TPHQ+ + +P +F Sbjct: 7 HNEIEINFFPEEGITYLFQGKKIKIPANRFTLFWALTPHQIVAFEAGLPYYVCTVPFSVF 66 Query: 104 LSWPLDKDLINHVTHGMVIKSLATQQLSPFEV--RRWQ---QELNSPNEQIRQLAIDEIG 158 L W L + + +G +I S E +RW QE +P ++A+ E+ Sbjct: 67 LEWKLPASFVEKILNGEIISEANPIYSSVDETNFKRWFDDFQEKKNP-----KIALLEVQ 121 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 + R + + TS++ S + A V ++ FIA++Y + + ++D+ + V+ Sbjct: 122 GRVNRMAYE-----YIPSTSKSISTSHIKEAN-QVEKIAMFIAQHYTEPIKVSDIGKAVE 175 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 L+ ++A IF++ T+ +YIT RI+H + LL +D I +A GF+S SRF + F Sbjct: 176 LHPDHANTIFKKTFGTTLSEYITEERISHAQRLLLTSDLPITQLAFNCGFQSISRFNAAF 235 Query: 279 GKYVGMSPQQYRK 291 K G +P+ +RK Sbjct: 236 LKITGYTPRDFRK 248 >UniRef50_Q2SQF1 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQF1_HAHCH Length = 280 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/195 (32%), Positives = 104/195 (53%), Gaps = 6/195 (3%) Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 LP+ + + + HG + + A + L V RW +EL ++ ++ L DEI Sbjct: 87 LPLSFLAELCIPHRMKQKLLHGEICVADAAKALESETVARWAEELACQDDYLKDLVWDEI 146 Query: 158 GLMLKRFSLSGWEP-ILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 L+L+R P V K + K S RH V +M+ ++ E Y ++++ DVA H Sbjct: 147 ALLLRRLFKDAPGPDACVAKPAGEPKGSC-RH----VHKMVEYMNERYCDSISVADVAAH 201 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 V+L+ N+AMG+F++V+ +T+ +Y+T +R+NH LL+ T IA +GF S +RFY Sbjct: 202 VRLHKNFAMGLFKQVLDMTILEYLTQLRVNHAARLLTTTSLRASQIAFESGFSSITRFYE 261 Query: 277 TFGKYVGMSPQQYRK 291 F + SP YRK Sbjct: 262 VFSRSFSQSPCDYRK 276 >UniRef50_B6A065 Transcriptional regulator, AraC family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A065_RHILW Length = 287 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 4/254 (1%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 +E M ++HWH +EVN+ +G + YL N ++ + GH+ LFWA PHQ Sbjct: 21 VERHVADTMASAHWHDHIEVNLLLEGSMTYLFNGKQEFVEAGHLVLFWAAIPHQTIFVTP 80 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 + LP+ FL+ P+D V G I + T + RW + + Sbjct: 81 ESPLICIYLPLVDFLALPIDAASRQAVLQGAFISEVETFSSTSAARERWVDDWLKGDNAR 140 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 RQL DE ++++R L + + + +S Y + I+ Y + LT Sbjct: 141 RQLVKDETSIVVRRLMLDH----VRKRAAPPPVPKLSGPEVKYAQVLTELISRQYSEELT 196 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 + +A H ++ A F+ V+ +++ +Y+ R+ L++TD IL+I GF Sbjct: 197 LPSIARHAHVHPTTANRAFRSVLGISVMEYLGRYRLARAMQRLAETDDPILNIMNDCGFG 256 Query: 270 SSSRFYSTFGKYVG 283 S++RFY F K G Sbjct: 257 STARFYDAFKKTDG 270 >UniRef50_Q2CK10 Regulator of melibiose operon n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CK10_9RHOB Length = 306 Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 80/277 (28%), Positives = 132/277 (47%), Gaps = 9/277 (3%) Query: 20 SLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWAC 79 +L S R + P +M + HWHG VE N + Y ++ ++V++ + + LFWA Sbjct: 24 ALSSAIGRFGMRLFVPTVMASPHWHGHVEGNFVTGARLVYDVDGDRVDVPENRLILFWAG 83 Query: 80 TPHQLTD---TGTCQS-MAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEV 135 PHQL + TG +A LP+ FL P L + G + +L + S + Sbjct: 84 LPHQLREVIPTGDAPPRLANIYLPLDSFLYMPHIARLQVSLLGG-AMAALPEEACSAERI 142 Query: 136 RRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSV--SRHAQFYV 193 W ++ + + ++ E +L+R L P L + + + S H Q +V Sbjct: 143 EGWYKDYRANEYERLEIMKMEFNALLRRALLDDV-PYLRDGLVEMDEGRILSSVHIQ-HV 200 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 M+ I E+ + L+ DVA + NYA+ +F R M++ MK++I MR+ RALL Sbjct: 201 VAMVKHILEHLSEPLSNADVAAVTGFHQNYALSLFSRTMRMPMKRFIIRMRLLRARALLM 260 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + +I + +GF S+S+FY F G+SP Q R Sbjct: 261 GSSMAISQVVEQSGFTSTSQFYQHFKTAYGLSPHQMR 297 >UniRef50_B6QZ43 AraC protein, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ43_9RHOB Length = 214 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 3/189 (1%) Query: 104 LSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKR 163 L W L + + + G VI + A + W E + R+L + EI R Sbjct: 20 LQWGLPTRITDALISGDVICNKAPCPIDAVRFGHWANEFKRDDINWRKLVLSEISSRFTR 79 Query: 164 FSLSGWEPILVNKTSRTHKNSVSR-HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNAN 222 +L GW + + R V R + +V +ML FI+EN+ +++ DVAE V L+ + Sbjct: 80 LALDGWNTL--HHDYRQSSTVVGRGKSMLHVEEMLRFISENHTSDISVTDVAEFVGLSPS 137 Query: 223 YAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYV 282 +AM +F+R++ L +K+++T +R++H R LL++++ IL IA+ +GFRS S FY F + Sbjct: 138 HAMTLFKRIVGLPIKEHLTRVRLSHARMLLAESEMKILSIAMDSGFRSLSSFYEAFQNHF 197 Query: 283 GMSPQQYRK 291 SP +RK Sbjct: 198 STSPAAFRK 206 >UniRef50_C7MHG0 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MHG0_BRAFD Length = 300 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 80/299 (26%), Positives = 135/299 (45%), Gaps = 56/299 (18%) Query: 34 APHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSM 93 AP M + H H VE+N+ DG + YL + + I +G I +FWA PH L D+ T M Sbjct: 23 APPPMFSMHRHDDVEINLVLDGQLHYLFGGQPLTIREGEIAVFWAAQPHGLVDSRT-GDM 81 Query: 94 AIFNLPMHLFLSWPLDK----------DLINHVTHGMVIKSLATQQLSPFEVRRWQQEL- 142 ++P +FL+W L + LI H + + +A RW +E+ Sbjct: 82 CWLHVPFSMFLAWGLPEAQTAPLLSAQPLITHAPD--LARRIAHM------AERWGEEVG 133 Query: 143 -----------------NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHK--- 182 + +++ ++A+ EI ++R ++ +SR + Sbjct: 134 GAEPGGGTGAAGGADGSSRGDDESTEIALLEIQAAMRR---------VLRASSRANPEAP 184 Query: 183 ----NSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQ 238 SV VS M ++ +++ +T+ D+A V L ++AM +F+R +T+ Sbjct: 185 SDGGGSVPAARLRQVSTMAQYVRDHHRSPVTVADIAASVHLAPSHAMTVFRRTAGVTLGD 244 Query: 239 YITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 Y+T R+ + LL T + +IA AGF S S FY GM+P++YR+ QRR Sbjct: 245 YVTMCRVAEAQRLLLTTSLKVTEIAEEAGFGSLSSFYEHVSAACGMTPREYRR---QRR 300 >UniRef50_C0A1S6 Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A1S6_9BACT Length = 308 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 15/269 (5%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 M + H ++E+N G + + E V++N G +WA PHQ+ + + Sbjct: 31 MAAADQHNEIELNFIERGAMVFRRGVETVSVNAGEGVAYWAAVPHQVLAVEADTVITWVS 90 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLAT-QQLSPFEVRRWQQELNSPNEQIRQLAIDE 156 +P+ FL W L + G ++ A + F + W ++ S E+++ + E Sbjct: 91 VPLSWFLGWELPAVFTRRLLEGGLLGMPAELTGGTVFSLAGWGRDFASEAEELKVVVRLE 150 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHK----------NSVSRHAQFY----VSQMLGFIAE 202 + +R++L + V + + V Y V +M+ +I E Sbjct: 151 LEAFFRRWALGATKASGVELAAAVAGEAALGTGLRLSGVLSGGNGYQCRHVERMVRYINE 210 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 ++ +T+ VA KLN YAM +FQ+ +T+ +++ R++ R LL +D +++I Sbjct: 211 HFRDEITVAMVAGAAKLNPEYAMRLFQKRWGMTLWKFLLRQRVSEARRLLLLSDTPLIEI 270 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 AL GF+S SRFY F G SP YRK Sbjct: 271 ALGCGFQSLSRFYEAFKAECGCSPGAYRK 299 >UniRef50_A6WDN9 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDN9_KINRD Length = 282 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 28/262 (10%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL------TDTGTCQSMAI 95 H H +EVNV G +EYL+ E+V++ +G +FWA PH+L D+ TC Sbjct: 28 HRHDDLEVNVALRGSLEYLVGGERVSVPEGSTAVFWAAAPHRLLSSDGPRDSDTCW---- 83 Query: 96 FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE---VRRWQQELNSP---NEQI 149 +LP+ + L W L V + + T + P WQ++L P Sbjct: 84 VHLPLAVVLRWSLPAAFSATVMSQRTVV-VPTAVIGPHVEGLFTTWQRDLAHPRGAEPDT 142 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 + ++ ++L+ G P T R + V+ M + AEN+ ++ Sbjct: 143 EAMLLEANAMVLRILGHRGPAP-----TPRPRPD------LRPVALMARYTAENFRDRIS 191 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 D+A LN NYA +F+R +T+ + RI + LL T + +A AGF Sbjct: 192 AADIARAANLNPNYATTLFRRATGVTLGDQLLRHRIAEAQRLLLTTSMTTAAVAHAAGFG 251 Query: 270 SSSRFYSTFGKYVGMSPQQYRK 291 S S Y+ F + G SP YR Sbjct: 252 SGSSLYAHFARACGCSPGAYRA 273 >UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGS5_CLOCL Length = 293 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 76/260 (29%), Positives = 132/260 (50%), Gaps = 20/260 (7%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVN---INQGHITLFWACTPHQLTDTGTCQSMAIFNL 98 H H +VE+ DG E + + VN + +G L A T H+L G +S + N+ Sbjct: 36 HTHDRVEIMYVIDGQCEIDVATDNVNNLKLKKGDFILLDAGTVHRLIVLGE-KSCRMLNI 94 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 S+ D D++ + ++I+ + + L FE+R L N+ L I Sbjct: 95 E----FSFIEDSDILTSIR--LLIEKVKSIAL-LFEMRCPFLLLKDNNDIYHSLKNIVIQ 147 Query: 159 LMLK----RFS--LSGWEPIL-VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 L ++ +FS L +E +L ++K + +++N+ + + Y+++ FI+ NYD+ +TI Sbjct: 148 LGMESEENQFSIQLLFYELLLKISKVAMSNENTST--SNIYINKAKHFISMNYDKDITIK 205 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D++ +V +N +Y IF++ T+ +Y+T RI + LLS+TD I+DI G S Sbjct: 206 DISSYVNINEDYLNRIFKKHTGHTITEYVTLFRIEKAKMLLSNTDIPIIDICSYVGINSR 265 Query: 272 SRFYSTFGKYVGMSPQQYRK 291 F F K G+SP +YRK Sbjct: 266 QYFSQVFKKCTGISPYKYRK 285 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 33/266 (12%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH + + + G++ + IN++ + +G +TG S+ N P Sbjct: 48 HWHDEYQFSYVTQGEIYFYINDQTFILKEGQGIFI---------NTGCMHSIKAVNDPES 98 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEV-----RRWQQELNSPNEQIRQLAIDE 156 ++ +DK L + G VI+ L+ + W E + + I Q +D+ Sbjct: 99 TYVCINIDKKLFSSFK-GSVIEQKYLNTLTQSAIFLDLSEEWHIECINKLKDIYQFYVDK 157 Query: 157 ---------IGLM--LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 I LM L + PIL+ T+ K+ + + ++L F+ ++Y Sbjct: 158 SFSFEIDICINLMQTLALVVKNALNPILL--TTIESKDEYQK-----IKKILSFLHQHYA 210 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + +T+ +A+H+ LN N +F+R ++T+ +Y+ R+N LL +DKSI IA+ Sbjct: 211 EKITLEQIAQHIFLNKNECCRLFKRKTKMTIFEYLLEHRLNKSIELLIHSDKSISQIAID 270 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRK 291 GF + S + TF K VG++P +YRK Sbjct: 271 TGFSTVSYYIDTFHKNVGITPNEYRK 296 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 34/266 (12%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL----TDTGTCQSMAIFN 97 HWH + E+ G + I+ E G + +P L + TGT F Sbjct: 35 HWHDEFEIIYVKSGFLTVNISGENYIGKPGDA---FVVSPGNLHFMGSKTGTVDYFT-FL 90 Query: 98 LPMH---LFLSWPLDKDLINHVTHGMV---------IKSLATQQLSPFEVRRWQQELNSP 145 P+ + LD L+ + G + IK L Q + +E ++ ++ELN Sbjct: 91 FPLKYISFYTDDILDDRLLEPLDSGRLMISPSVKDTIKELCEQLIEIYEAKKSERELNIT 150 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 QI+ ++L +F L WE + + + + +N V + +M+ +I +N+ Sbjct: 151 T-QIKT------KIILLQFILEMWEKGFIVENNTSGRNIVEK-------EMVSYIQQNFT 196 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 +++ + E L+ Y F+ +T+ QY+ +R+ + + LL DTD S+ + A+ Sbjct: 197 GKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQLLQDTDISVTEAAMR 256 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRK 291 +G+++ S F +F K G+SP +YRK Sbjct: 257 SGYQNISYFIRSFKKTYGVSPLKYRK 282 >UniRef50_UPI0001C35ADD AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35ADD Length = 304 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 16/260 (6%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 M HWH +E++ D + ++ IN +K + G ITL + H L Sbjct: 29 MILEHWHRSIEIDYLLDCEADFYINGKKKQVAAGSITLINSGDIHALEPREVPVDTEDKI 88 Query: 98 LPMHLFLSWPLDKDL---INHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 + LF+S+ K + I+ +T + + ++L + EL P Sbjct: 89 HGISLFISYEFLKKICPEIDQITFELEGQEERLKELKEVFNSLIRLELAPP--------- 139 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQM---LGFIAENYDQALTIN 211 +E G + K L +L+ + +N S +Q Y+ ++ L ++ ENY + LT+ Sbjct: 140 EEYGYLKKNAMLHSLMYLLLT-YFKEPRNQSSVKSQKYIDRLRVVLDYVEENYREPLTLQ 198 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 VA+H ++ Y I ++ T K ++ +R++ L +TD S+L+IA+ GF + Sbjct: 199 GVADHFSVSMEYLARILKKYTGNTFKTHLNQVRVSKAFRDLLETDYSVLEIAMRNGFSDT 258 Query: 272 SRFYSTFGKYVGMSPQQYRK 291 + F GM+P QYRK Sbjct: 259 RSLINVFRDTYGMTPSQYRK 278 >UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHI4_CLOPH Length = 259 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 116/250 (46%), Gaps = 18/250 (7%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 H H ++E+ + G VE N + + + + I + T H C+ + P Sbjct: 25 HLHKEIEILICQKGVVEATCNGQTLLLEESDIMIALPNTIHSYETKEYCEYILCILSPST 84 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 L PL K ++ T++++PF VR +E N++ ++L I + ++ Sbjct: 85 L----PLFKPYFQKEFTTPFLQMDQTKKITPF-VRMLLEEWE--NDRNQELMISYLSVI- 136 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNA 221 FSL K + T+++ + +L ++ E+Y + ++ D+A H+ N Sbjct: 137 --FSLILKNTTFTEKATSTYED--------ILPSILLYVDEHYLEQFSLEDLASHLGFNP 186 Query: 222 NYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKY 281 +Y +F + T+ Y+ +R+N+ + LL +T+KSI +IA GF + F F + Sbjct: 187 SYVSRLFSERVHCTLTHYVMELRVNYAKHLLQNTEKSITEIAYECGFATQRSFNRVFLQL 246 Query: 282 VGMSPQQYRK 291 V +P++YRK Sbjct: 247 VNTTPREYRK 256 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 66/113 (58%) Query: 182 KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYIT 241 + +S AQ V + + +I +Y LT D+A +V ++ +Y F++ + T +Y+ Sbjct: 1086 RRRLSDQAQMLVRKAMAYIHSHYTHPLTRQDIAHYVGMSEDYLTHCFRQELGTTPVEYLN 1145 Query: 242 AMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 R+ R LL+++DKSI +IAL GF SSS F F K VG SP++YR+L Q Sbjct: 1146 RYRVLQARHLLAESDKSITNIALEVGFSSSSYFSRVFRKEVGQSPEEYRRLKQ 1198 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 12/166 (7%) Query: 135 VRRWQQELNSPN---EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQF 191 + R +E +P+ E + L + E+ +++ R WE + NK+ + + Sbjct: 145 LNRILKERENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKE--------- 195 Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 + + +I NY++ +++ D+A +V L+ +Y F+ M ++ Y+ +R+ + L Sbjct: 196 LIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKEL 255 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 L DTD I DIAL+ GF + RF F KYV ++P QYRK Q ++ Sbjct: 256 LKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNVQVKK 301 >UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIS8_9CLOT Length = 285 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 14/270 (5%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 I A MP H H + E+ +G Y I+ ++ G + HQ + G Sbjct: 18 IRREAAFTMPCKHLHNEYEIYYLLEGQRYYFIDRRTYHVTGGSLVFIDRNQIHQTSQAGP 77 Query: 90 CQSMAIF----NLPMHLFLSWPLDKDLINHVTHGMVIKSL--ATQQLSPFEVRRWQQELN 143 I P FL++ + L I +L Q L+ + + +EL+ Sbjct: 78 GSHERILISLDQNPFSDFLAFTGEMSLEGFFRRNSGILNLDKEGQNLAEYLLDGAAKELH 137 Query: 144 SPNEQIRQLAIDEIG--LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 R + + ++ +L + +SG + + T +H + V ++ +I Sbjct: 138 EKKPGFRHITMSKLSQLFILAQRHMSGPSSLSADLPLSTQ----PKHRK--VDEVASYII 191 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 ++YD+AL++ +A H +N Y IF+ T+ +YI +RI R LLS+T SI + Sbjct: 192 DHYDKALSLEIIAAHFYVNKCYLSRIFKEASGFTVNEYINMIRIRRARELLSNTSMSITE 251 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++ + G+ + + F F +Y SP YRK Sbjct: 252 VSESVGYETITYFERVFHQYTQTSPSGYRK 281 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/281 (22%), Positives = 126/281 (44%), Gaps = 27/281 (9%) Query: 31 EFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTC 90 E + +++ HWH Q+E+ G+ + I+ +K +++ I + H + C Sbjct: 25 ESDSENLIVKHHWHDQLELIHMKKGEFQVEIDMDKHVVHEETICFINSEELHFIKSNHPC 84 Query: 91 QSMAI-FNLPMHLF-----LSWPLDKDLIN-----------HVTHGMVIKSLATQQLSPF 133 + AI F+L M F + L + L+N HG I ++ L + Sbjct: 85 KESAIVFDLKMLSFDMFDSIQGSLIQPLLNGELKMPHFIFKKDKHGEEILKEYSEILEAY 144 Query: 134 EVRRWQQELNSPNEQIRQLAIDEIGL---MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 ++ Q +P I + +I + +LK ++ +L+ + ++ V Sbjct: 145 KIS--GQISQNPEGNITEKLSSQIKIKASLLKILAILYENNLLIKENNKNKDYRVE---- 198 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 Y+ + +I NY + + I D+++ + +N Y F+R++ T +Y+ RI + Sbjct: 199 -YIKTAISYIQNNYSEKIHIKDLSKQINMNEQYFCRFFKRMIGKTPMEYVNEYRIKKAKE 257 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 LL +T++ ++DI L GF + F F K+ G++P +YRK Sbjct: 258 LLRETNRQVMDICLECGFHNMGNFIKVFKKHTGINPMKYRK 298 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 28/280 (10%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 Y E+++ E++F H H E G + + + +G I A T Sbjct: 22 YKEWRQFEMKF---------HSHEAAECMHVLSGSCKVETDEGSYQLKKGQIIFLDAGTR 72 Query: 82 HQLTDTGTCQSMAI-FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL-----SPFE- 134 H+L + C+ + F+ P K + G ++ A+Q L ++ Sbjct: 73 HRLIVSERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLLHDTDDTYQC 132 Query: 135 VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVS 194 +RR E++ +EQ + + L+L + L+ Q YV Sbjct: 133 LRRLILEVDKKSEQTDFM----VQLLLSEY--------LIRIAELAEAKVAEPDQQAYVK 180 Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 + L +I +NYD+ +++ D+A V L+ Y +F+ ++ +++ + RIN +A+L Sbjct: 181 RALAYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQ 240 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 TD SI DI G S F +TF K+V +P +YRK Q Sbjct: 241 TDISITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280 >UniRef50_A6TX25 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TX25_ALKMQ Length = 226 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 3/124 (2%) Query: 173 LVNKTSRTHKNSVSRHAQ---FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQ 229 LV T++ H+ + H YV + L +I Y + +T+ ++A +K+N Y +F+ Sbjct: 100 LVRDTTQIHQGQIGIHGMPLGLYVKKALDYIQAKYSEPITLTELAHDLKINRCYFCTLFK 159 Query: 230 RVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQY 289 + T QY+ +RI + LL + SILDIAL GF + S + TF K +P ++ Sbjct: 160 KETNKTFSQYLNEIRIERSKELLPENKLSILDIALAVGFNNQSYYTMTFKKLANQTPLEF 219 Query: 290 RKLS 293 RK+S Sbjct: 220 RKIS 223 >UniRef50_A8ML53 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8ML53_ALKOO Length = 245 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 67/119 (56%) Query: 182 KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYIT 241 K S+++ + + + +I N + LT+ +VA H L+ Y F++ M+++ Y++ Sbjct: 127 KKSLNKVDNISIRRAIDYILNNLGETLTLEEVANHANLSKCYFCTQFKKEMKMSFTDYLS 186 Query: 242 AMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 RI + LL +++KSILDIA+ GF S S F + F KY G+SP+++R + F Sbjct: 187 HARIEKSKYLLCNSNKSILDIAILIGFNSQSYFTTQFKKYTGVSPKEFRAKKEDNEYVF 245 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 47/286 (16%) Query: 38 MPTS------HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTC- 90 MP S HWH ++E+ + G + Y I+ E ++ +G + L +PH L Sbjct: 1 MPNSYRNLSLHWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLI---SPHILHSAHEMP 57 Query: 91 -QSMAIFNLPMHL-FLSWPLDK----DLINHVTHGMV---------------IKSLATQQ 129 +SM +L HL FL + + +N V G + +K Sbjct: 58 GKSMVSDSLVFHLDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISL 117 Query: 130 LSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHA 189 L F +++ EL + L+++ F L ++ V K TH A Sbjct: 118 LECFNGKQYGYELYTKE------------LLMRLFRLL-YQYGCVAKHEGTHGEF---GA 161 Query: 190 QFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVR 249 + + ++L +I NY + LTI +++ + + M F+R +T +YI RI Sbjct: 162 EEKLKEVLSYIQSNYRETLTIEELSSVCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAA 221 Query: 250 ALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 A L +T++ ++DIA+ GFR+ S F F + G++P YRK S++ Sbjct: 222 ADLVETERQVMDIAMENGFRNISYFNKVFKERFGVTPGSYRKNSRE 267 >UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC61_9FIRM Length = 298 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/256 (21%), Positives = 117/256 (45%), Gaps = 10/256 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ--LTDTGTCQSMAIFNLP 99 HWH ++E+ + DG + Y +N ++ G I L A H + D + ++I LP Sbjct: 41 HWHPEIEITLVLDGQILYKVNQCTYHMKAGDILLGNANVLHAGFMEDMKDGKYVSITFLP 100 Query: 100 MHLFLSWP--LDKDLINHVTHGMVIKSLATQQLSPFE--VRRWQQELNSPNEQIRQLAID 155 ++ S+ L + + H + ++ P+ + +E+ + E+ ++ Sbjct: 101 KIIYGSYGSILRRKYVEPFLHNFSLPAVYIDYSQPWHEVFSEYVREIITLYEEKKEFYEL 160 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 +I L++ W +L N S+ + + +++ ++ NY + + D+AE Sbjct: 161 DITGTLQKL----WRCMLQNLPENLPYTEHSKLERNRMREIMDYLEYNYMNKIQMKDIAE 216 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 + L + +F+R M +++ ++ R+ L +D SI+++A +GF S+ + Sbjct: 217 EIHLCESECSRLFKRYMNVSLFTFLQEYRVERSLEFLLSSDDSIMEVAQKSGFTDSNYYA 276 Query: 276 STFGKYVGMSPQQYRK 291 F + G SPQ+YRK Sbjct: 277 KIFSRVKGCSPQKYRK 292 >UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2G6_9CLOT Length = 299 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 74/312 (23%), Positives = 137/312 (43%), Gaps = 39/312 (12%) Query: 1 MNTDTFMCSSDEKQTRSPLS----LYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGD 56 M + K+ R PL + +E+Q++ + + SHWH ++E+ V +G Sbjct: 1 MEKKKIQTDKEGKELRQPLDGKFPIAAEFQKLSY---YAYGLCISHWHPEMELLVVTEGA 57 Query: 57 VEYLINNEKVNINQGHITLFWACTPH--QLTDTGTCQSMAIFNLPMHLFLSWPLDKDLIN 114 +E I E I + + H ++ + C I P L + K LI Sbjct: 58 LEQRIGEETHMIRENEGVFINSHVMHGARMVNREDCSYRVIRFEPALLGGN---AKSLI- 113 Query: 115 HVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI--------------GLM 160 + +K+L +Q+ + + R P + ++ ID I L Sbjct: 114 ---YEKYVKTLQSQKDLLYRIVR-------PEDIQQRRMIDLIYKITDTYVKREVCYELK 163 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY-VSQMLGFIAENYDQALTINDVAEHVKL 219 +++ L WE +L +T +N++ + + Y + L +I Y +T+ D+A L Sbjct: 164 VQQMMLELWE-LLYKRTGHVEENAIQMNRELYKIQDALAYIQMYYKNPMTLEDIAGACML 222 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 + + +F++V + + +Y+T+ RI L++D SI +IA +GF +SS F F Sbjct: 223 SKSSCCRLFKKVFRQSPMEYVTSYRIQQSFMLIADDRYSITEIAYESGFTNSSYFTEMFR 282 Query: 280 KYVGMSPQQYRK 291 K +GM+P QY+K Sbjct: 283 KVIGMTPTQYKK 294 >UniRef50_C9RT55 Two component transcriptional regulator, AraC family n=4 Tax=Bacillales RepID=C9RT55_GEOSY Length = 259 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 2/111 (1%) Query: 183 NSVSRHAQFY--VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 N++ RH Q + + + FI + +++ DVAEHV LN +Y +F+ MQLT +Y+ Sbjct: 144 NALDRHPQTREPIREAIQFIDQRLKDDISLKDVAEHVHLNPSYFSTLFKEQMQLTFSEYL 203 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 T R+ + LL TD ++ +IA G+R++ F F + G +P YRK Sbjct: 204 TRRRMQRAKELLMTTDMTVAEIAEECGYRTAKYFIHLFKEMEGKTPSSYRK 254 >UniRef50_Q1ZA51 Regulator of melibiose operon n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZA51_PHOPR Length = 131 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 63/108 (58%) Query: 184 SVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAM 243 +V A +S++L +I+ N+ + D+AEH+ L+ NY IF + + +T++QYI + Sbjct: 16 NVDHSANNIMSEVLLYISRNFRSNIKTRDIAEHLGLSPNYVTNIFTKNLGITIRQYILNL 75 Query: 244 RINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 R+++ + LL DT +I +I +GF S + FY F G SP+ Y K Sbjct: 76 RVSYAKTLLIDTSLNITEIIYLSGFFSKNSFYLDFNHIAGCSPKDYSK 123 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 15/270 (5%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH + E+ G V Y + V +++G + H L C+ L Sbjct: 44 HWHDEFELGYISGGSVVYQTSGLTVTLHEGDGIFINSGVLHYLHPLEPCREA---RLQTQ 100 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE----LNSPNEQIRQLAIDE- 156 F L L + + V L +QL + R E L + + + E Sbjct: 101 FFDKSFLAGSLGSLLDIKYVAPVLDQRQLEAVPLYRSDPESKGFLECLQKGVELCSRKEE 160 Query: 157 -IGLMLKRFSLSGWEPIL---VNKTSRTHKNSVSRHAQF-YVSQMLGFIAENYDQALTIN 211 L L+ WE I K S T S+ R + + QM+ ++ ++ + ++++ Sbjct: 161 FFELRLRNLFSELWESIYRWAAQKESST--PSLRRSIEDDRIKQMMRYVQAHFSEKISVS 218 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 +A + ++ +FQ M +T +Y+ ++R+ + ++LL +T+KSILDIAL GF SS Sbjct: 219 SIAASIPISERECYRLFQNSMGITPIEYLISVRLQNAQSLLMNTNKSILDIALETGFGSS 278 Query: 272 SRFYSTFGKYVGMSPQQYRKLSQQRRQTFP 301 S F F + ++P QYR LS+Q+ P Sbjct: 279 SYFGKIFRSHHRLTPAQYRNLSRQKALAAP 308 >UniRef50_C6CZY9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZY9_PAESJ Length = 283 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 1/100 (1%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V +++ +I E+Y + L ++D+A+++ LN +Y + IF+ +T+ Y+ RIN + L Sbjct: 177 VQKLIAYIEEHYREDLELDDIADYMHLNKHYLVKIFKETTGITLFHYLYQRRINQAKMLF 236 Query: 253 S-DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + + D+SI + A GF+ S F TF K+ G SP YRK Sbjct: 237 TMNPDRSITETAFEIGFKYVSHFSQTFKKFTGQSPDDYRK 276 >UniRef50_C6CWB0 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWB0_PAESJ Length = 530 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 1/111 (0%) Query: 182 KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYIT 241 + + RH Q Q++ IAE Y LT+ D+A+ V L+ NY IF+ T+ Y+T Sbjct: 419 ERDLDRH-QSVAEQIMKLIAERYHLPLTVEDIAKEVYLSPNYVRTIFKEKTGETILDYLT 477 Query: 242 AMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 +R+NH LL D + DIA + + S F S F K+ G +P +YRKL Sbjct: 478 RIRMNHAAELLKDRALKVRDIAHRVSYENVSYFCSVFQKHKGSTPNEYRKL 528 >UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=Marinomonas RepID=A6VUH3_MARMS Length = 316 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 16/259 (6%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++EV + +G + N + G + A T H+LT+ GT + I N+ Sbjct: 43 HWHDEIEVVLVIEGATKVECINSSDIVKTGEMVFINANTLHKLTNYGT-EDCRILNVVFS 101 Query: 102 LFLSWPLDKDLI--NHVTHGMVIKSLATQQLSPFEVRRWQQ----ELNSPNEQIRQLAID 155 + + LI HV + K L + S + W + EL + ++ D Sbjct: 102 PKMLGGMGFGLIYKKHVLPVINNKELLFYKFSG--AKAWHEQAINELAAAFNVWKEQGSD 159 Query: 156 E---IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 + + L +F W N+ T ++ ++ + + +L FI NY++ ++I D Sbjct: 160 REFYMNIALMKF----WYIFCTNQQDITATHNTAKANEKRIQSLLNFIHSNYEERISIAD 215 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 ++E ++ + IF+ + + Y+ R+ LL++++K I DIA +GF S+ Sbjct: 216 ISEAANISESECYRIFRNALNCSPNSYLLNYRLRKSVQLLTESNKQIADIAFESGFNCSA 275 Query: 273 RFYSTFGKYVGMSPQQYRK 291 F F ++P Q+RK Sbjct: 276 YFAKKFKLAFNVTPMQFRK 294 >UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KK32_CLOPH Length = 295 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 122/267 (45%), Gaps = 32/267 (11%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT--DTGTCQSMAIFNLP 99 HWH ++E+ + GD+ Y +N+ +++++G + H T + C+ ++I Sbjct: 40 HWHPEIELTLIVKGDMIYTVNDHPLHLHEGEALFGNVSSFHTGTKFENKDCEYISI---- 95 Query: 100 MHLFLSWPLDKDLI----NHVTHGMVIK------SLATQQLSPFEVRRWQQELNSPNEQI 149 D LI N +T+ ++ SL+ QL E W + ++I Sbjct: 96 -------TFDPKLIYGYENSITYRKYVEPITQNFSLSAIQLDYSE--EWHNNIIEIIKEI 146 Query: 150 -----RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENY 204 + A E+ ++++ L W+ + ++ S + + +L ++ NY Sbjct: 147 IAIGQNKEASYELDILMRLQQL--WKILYLHNNSAPAMTPYDKRNYDRIRSILSYVDNNY 204 Query: 205 DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIAL 264 LT+ ++AEH+ L + +F+R M++++ ++I RI L+D+ SI++IA Sbjct: 205 AMKLTLEEIAEHIHLCKSECCRLFKRYMKVSLFEFILQYRIEKSLNYLADSQYSIIEIAN 264 Query: 265 TAGFRSSSRFYSTFGKYVGMSPQQYRK 291 GF S+ + F K G SP +YRK Sbjct: 265 FVGFNDSNYYSKVFTKIKGCSPTKYRK 291 >UniRef50_C6CV07 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV07_PAESJ Length = 529 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 69/114 (60%), Gaps = 1/114 (0%) Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 H N V+ ++ + ++ +IA N DQ L+ +A++V L+ +Y + +F++ L++ YI Sbjct: 410 HINKVA-ASETIIEKIKRYIALNLDQELSRQYIADYVGLSPDYIVKLFKKETGLSVSDYI 468 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 RIN + LL+ TD ++ ++AL GF + S F + F K V M+PQ+YR+ Q Sbjct: 469 LTERINLAKELLAKTDTTVSNVALAVGFCNFSYFSTLFKKEVTMTPQEYRREKQ 522 >UniRef50_C5ERJ4 Two component transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERJ4_9FIRM Length = 538 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 1/106 (0%) Query: 193 VSQMLGFIAENY-DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 V + G+I +NY D +T +AE + ++ +Y GIF++ M +TM QY+T +R+ R L Sbjct: 430 VEKTCGYIRDNYRDPGMTQTQIAESLCVSPSYLSGIFKKTMGVTMVQYLTMVRMEGAREL 489 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 L +++ + DIA G+ F F + G+SP Q RK S RR Sbjct: 490 LLESEYDVKDIAEMVGYHDEYYFSRCFKRQYGLSPMQIRKFSDSRR 535 >UniRef50_B0A945 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A945_9CLOT Length = 421 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 36/93 (38%), Positives = 58/93 (62%) Query: 198 GFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDK 257 GFI++NYD+ +T+ DVA+ V L+++Y +F+ + T+ YIT +RI L+S + Sbjct: 325 GFISDNYDKNITVEDVADSVCLSSSYLSHLFREKLNCTVNNYITRVRIEKSIELMSMREL 384 Query: 258 SILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 SI +I+ GF S S F F +Y+G++P YR Sbjct: 385 SIQEISEKVGFNSQSYFTKIFKRYIGVTPVIYR 417 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 2/116 (1%) Query: 180 THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 T KNS+ + L +I ENY +T+ +VAEHV ++ Y +F++ +++ Y Sbjct: 139 TAKNSIQDGK--VIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSY 196 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 +T ++ + LL +TD ++ IAL ++ + F F K VG++P +YRK S++ Sbjct: 197 VTEKKMQKAKELLENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKRSKK 252 >UniRef50_B0A7Q6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7Q6_9CLOT Length = 241 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 61/104 (58%) Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 ++ + + ++ ++YD+++ I D+ EH+ LN +Y F+ T ++ RI + L Sbjct: 137 HIKKAIEYVHKHYDKSINITDLCEHLNLNKSYFCSTFKTTTGHTFCHFLNHFRIEKSKKL 196 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 L +TD ++LDIAL+ GF + + + + F K+ G +P QYR ++ Sbjct: 197 LLETDLNMLDIALSVGFNNQNYYCTMFKKFTGKTPLQYRVCNKH 240 >UniRef50_UPI00017885E1 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017885E1 Length = 513 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 59/99 (59%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V Q+ I + + QA+TIN +++ V L+ NY IF+ +T+ Y+T +R+N + LL Sbjct: 413 VHQVRTTIDQTFHQAITINSLSDQVYLSPNYLRSIFKEKTGMTIHDYLTKIRLNKAKELL 472 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +D + DIA G+ S+S F S F K G++P +YRK Sbjct: 473 ADDSLKVQDIAQRVGYESTSYFISLFLKSQGVTPNEYRK 511 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 58/110 (52%) Query: 182 KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYIT 241 KNS R YV Q +I + YD A+ D+A V L+ Y IF+ M T+ +Y+ Sbjct: 181 KNSTERQIHHYVRQATEYIHQYYDTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLV 240 Query: 242 AMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +R++ + LL+ TD I+++A G S F F K G+SP +YRK Sbjct: 241 DLRMDKAKMLLARTDVPIIEVADHIGLNSRQYFSMLFKKMTGISPAEYRK 290 >UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJM2_CLOCL Length = 286 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 19/274 (6%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ- 91 + + MP H H E+ G+ Y+INN I +G I L H+ T G Sbjct: 21 KVFYTMPREHSHDYYEIYYQLYGERYYIINNRSYYIKKGDIVLINKGVFHKTTYAGAINY 80 Query: 92 SMAIFNLPMHLFLSW-PLDK--DLINHVTHGMVIKSLATQQLSPFEV--RRWQQELN--- 143 + H+ P ++ +L++ + I +L+ Q FEV + E N Sbjct: 81 ERVLVGFKEHILKDIIPQEEFTELLSTFEKDISIINLSIQNQHTFEVLFTKLIHENNNRL 140 Query: 144 SPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAEN 203 S E +L + E+ + + R G L S HK VS++ +I +N Sbjct: 141 SSYETYSKLLLVELLININRHLEKGHVSYL-EFPSALHKK---------VSEIAQYITDN 190 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 D+ L ++ +A ++ Y +F+ V + Q+I + RI + LL +T I +I Sbjct: 191 CDKVLNLDILAHKFLISPYYLSRVFKDVTGFNLIQFINSERIKKSQYLLIETSLPIYEIC 250 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 GF S+ F F + MSP +YRKL+ +++ Sbjct: 251 EVVGFNSTIHFTRVFNSFTSMSPSKYRKLNSKQK 284 >UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KTC0_CLOPH Length = 298 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 27/277 (9%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIF- 96 MPT H+H + EV +G+ Y I ++ + +G + H+ GT I Sbjct: 26 MPTKHFHDEYEVYYLLEGERYYFIEHQTYLVKKGSLVFVNRGQIHKTGLAGTSYHDRILI 85 Query: 97 ---NLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLA 153 P F S+ D L + + K +L + RR ++ L S + +I+ + Sbjct: 86 ELKEEPFASFFSFFGDLSLKDFFS-----KHYGVLELEEKDQRRIERLLTSISTEIQNKS 140 Query: 154 ID-EIGLMLKRFSLSGWEPILVNKTSRTHKNS--------VSRHAQFYVSQMLGFIAENY 204 I EI +M+K L ++ + + N+ ++H + V ++ +I N Sbjct: 141 IGFEISVMMKLAKL-----LIFSMRCKADTNTFIPATTATTAKHRK--VDEVASYIVNNC 193 Query: 205 DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIAL 264 ++++ +++H ++ Y IF+ V T+ +YI R+ + LL ++ +I +I+ Sbjct: 194 TNPISLDALSKHFFVSKCYLSRIFKEVTGFTVNEYINIHRVQKAQYLLLYSESNISEISA 253 Query: 265 TAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFP 301 GF S + F F KY SP +YRK Q R++ P Sbjct: 254 QLGFESITYFERVFKKYTESSPLKYRK--QNRKEIQP 288 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 122/287 (42%), Gaps = 29/287 (10%) Query: 25 YQRMEIEFRAPHI-MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ 83 Y ME + R + M H H E+ G+ Y I + + G + H+ Sbjct: 15 YLSMEYDRRIGYFSMSADHLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHK 74 Query: 84 LTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELN 143 D+G P H L ++ +L + V LA PF L Sbjct: 75 TLDSGR---------PDHDRLVLYINPELFADLA---VPPELAEGLKEPFGWDVPILRLP 122 Query: 144 SP-NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTS-------RTHKNSVSRHAQF---- 191 SP +E + ++ D + M+ + S W +L ++T R+ + R A Sbjct: 123 SPASEAVERMVGDMVNEMIHPQAGSSW--LLRHRTVELLLFAYRSRHLGMVRSADTEPVL 180 Query: 192 --YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVR 249 ++ ++ +NY QALT+ +VAE +++ +Y +F++ T Y+ +R+ + Sbjct: 181 HPKTQAVVRYLNDNYRQALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQ 240 Query: 250 ALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 LL ++D SI DIA +GF + S F F + V +SP+ YR+ + R Sbjct: 241 RLLRESDDSITDIAWRSGFSNFSHFGKMFKRTVQLSPRAYRQQYRMR 287 >UniRef50_UPI000178A094 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A094 Length = 289 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 18/263 (6%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT---DTGTC--QSMA 94 T H H +EV G ++NN I G + +F C H L D C +S+A Sbjct: 29 TFHSHLGLEVLFIHQGRGTMIVNNNSYEIKPGMLCIFQPCQLHHLKLEYDDHQCFERSIA 88 Query: 95 IFNLPMH--LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQL 152 IF + F WP + N + G + + P+ + S N++ L Sbjct: 89 IFEPTVFEAYFKQWPALHEFYNFIYLGNLPFPCLYEVDDPY----LEGAYKSMNDRFPTL 144 Query: 153 A----IDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQAL 208 + +EI L L +PI + R+ ++ + V +L +I NY Sbjct: 145 SDTEKYEEISLFLVAL-FRSLKPIWDKRKVRSSTYQTRKNHR--VEHILTWIETNYTIPF 201 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 ++D+A+ + L+ + +F+ +++ +YI A RI+ LL+ T K I IA G Sbjct: 202 RLDDMAKSLHLSPYHLSHLFKEATGISITEYIAARRIHQSIQLLATTKKPISLIAEEIGL 261 Query: 269 RSSSRFYSTFGKYVGMSPQQYRK 291 +SS F F +G++P QYRK Sbjct: 262 TNSSYFCKLFKSQMGITPHQYRK 284 >UniRef50_UPI0001C3592F AraC-like transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3592F Length = 284 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/273 (20%), Positives = 115/273 (42%), Gaps = 31/273 (11%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP 99 SHWH +E+ + G++++ + +I + + + + H + D + +P Sbjct: 31 ASHWHRSIEIFLVMKGEIDFYLGERHFSIGEKNFIIVNSNEVHSI-DAPLPNRTLVLQIP 89 Query: 100 MHLF---------LSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIR 150 + F LS+ N G+V++ T + + W+ +++ E ++ Sbjct: 90 VQTFEVYLQEQPYLSFSRRSGEQNEKLMGLVMEMYRTYENKAYA---WELKVSGLFEFVK 146 Query: 151 QLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTI 210 L +L F P ++ + K +S++ ++ +YD+ L++ Sbjct: 147 YL-------LLTEFKDQAQAPDIIRQKIHLEK----------LSEITEYMKNHYDEPLSL 189 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 VA+ + Y IF+R ++ + Y+ +R+ + + TD + DIA+ GF Sbjct: 190 EKVADRFGFSPTYLSRIFKRYANISYRDYLQDLRVEYAVKEMVHTDHELGDIAVNHGFAD 249 Query: 271 SSRFYSTFGKYVGMSPQQYR-KLSQQRRQTFPG 302 S F F K G P +YR KL ++R ++ G Sbjct: 250 SRAFAKAFAKRYGCLPSEYRKKLKEERGESSEG 282 >UniRef50_B2V102 AraC-family transcriptional regulator n=2 Tax=Clostridium botulinum E RepID=B2V102_CLOBA Length = 253 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 65/110 (59%) Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 H+ + + F++ + L +I ENY + +T++ + HV +N +Y +F++ + T QYI Sbjct: 139 HEYIIRKIYSFHIKRALEYIHENYKKNITLDKIVSHVNINKSYFCSLFKKEIGKTCTQYI 198 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 ++RI LL +T+ S+LDI+L GF + + + + F K +SP +++ Sbjct: 199 NSLRIKESEELLLNTEMSLLDISLAVGFNNQNYYNNLFKKEHCISPLKFK 248 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 32/285 (11%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL------TDTGTCQ 91 M HWH +VE+ G+ +N E+ NI++ F+ P +L + G + Sbjct: 35 MVKHHWHEEVELLYFSGGEFCLEVNMERFNISE---ECFYFINPGELHSISVEKNGGCVE 91 Query: 92 SMAIFNLPMHLFLSWPLDK---DLINHVTHGMVIKSLATQQLSP-FE-VRRWQQELNS-- 144 + +F++ M L ++ LD+ +LI V +G + ++ P FE VR+ +E+ + Sbjct: 92 NAVVFHMDM-LNSAYALDQIQTNLIQPVQNGSIQFPRCLRKNEPAFEPVRKSYEEIRNVF 150 Query: 145 ------PNEQIRQLAIDEIGLMLKRFSLSGWEPILV-----NKTSRTHKNSVSRHAQFYV 193 N + D+I L F S IL N T KN R + Sbjct: 151 GGDSFRENYYDGEAVTDDITRQL--FIKSALLRILAVLSANNLFEVTEKNHDHRIET--I 206 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 L +I ENY + + I D+A + +N Y F++V+ + +Y+ RI L Sbjct: 207 KTTLTYIQENYKEKIYIRDLAGLIGMNEQYFCRFFKKVIGRSPMEYVNEYRIKRAIHYLK 266 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 ++D ++ +I L G+ + F F KY +P QYR+ S + Q Sbjct: 267 ESDLTVTEICLECGYNNLGNFLREFRKYTSTTPLQYRRHSLKETQ 311 >UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDM6_9FIRM Length = 298 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 57/99 (57%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + QML ++ ENY + +T+ ++A H + + FQ+V+ L+ QY+ RI LL Sbjct: 195 IKQMLRYLQENYTRRVTVAELAAHANICERECLRCFQKVLHLSPIQYLIRYRIARSCILL 254 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++D S+L+I+ GF S S F TF + G +P QYR+ Sbjct: 255 RESDLSVLEISNLCGFESPSYFTKTFRQITGGTPTQYRR 293 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 72/132 (54%), Gaps = 7/132 (5%) Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 ++L +F L W+ V + + +N V + +M+ +I +N+ +++ + E Sbjct: 170 IILLQFILEMWKKGFVIENDTSGRNIVEK-------EMVSYIQQNFTGKISLKEFGEQFH 222 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 L+ Y F+ +T+ QYIT +R+ + + LL DTD S+ + A+ +G+++ S F +F Sbjct: 223 LSEKYISRYFKEHFHITLSQYITYLRLENAKQLLQDTDLSVTETAMQSGYQNVSYFIRSF 282 Query: 279 GKYVGMSPQQYR 290 K G+SP +YR Sbjct: 283 KKAYGISPLKYR 294 >UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBD9_CLOBU Length = 302 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 7/259 (2%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E + G +EY E + + +G + T H Q +F++ + Sbjct: 43 HWHPEIEFVMITKGKIEYSTEEETLILREGDGIFINSNTLHMAKSIDGYQDSLMFSVVVS 102 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE---IG 158 L + + +I +++ L + WQ+++ S I L +E Sbjct: 103 PKLIYNDTESIIYKKYVKPIVECSKLSYLKLDKYNTWQKQILSHLLYIDALKFNEEHGFE 162 Query: 159 LMLKRFSLSGWEPILVNKTS-RTHKNS-VSRHA--QFYVSQMLGFIAENYDQALTINDVA 214 ++K W+ I +N + H N ++ H+ Q + QML FI +NY +TI+D+A Sbjct: 163 FIIKNQISLIWQLIALNTSHLYLHNNCLINSHSLSQERLKQMLRFIHKNYFNNITIDDIA 222 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 + ++ + F++++ Y+T R+ LL +TD + DI + GF SS + Sbjct: 223 KSANISRSECFRCFKKMINTKPFSYLTDFRLEKSLQLLLETDIPVSDICYSCGFNHSSYY 282 Query: 275 YSTFGKYVGMSPQQYRKLS 293 F + G+SP YRK S Sbjct: 283 GKLFREKFGISPSSYRKSS 301 >UniRef50_A8VRA4 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRA4_9BACI Length = 229 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 56/104 (53%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + Q+ +I E+YDQ LT+ +A LN Y +F+ + K Y+ +R+ H R LL Sbjct: 124 IHQIKTYIDEHYDQPLTLKAIAGRFYLNHVYLGQLFKDTFGVLYKDYLVTVRVQHARRLL 183 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 S TD I +IA GF S F F K GM+P +YRK ++R Sbjct: 184 SQTDCRIEEIAERTGFGSPEYFTERFDKVTGMTPARYRKQFRER 227 >UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BFD5_9FIRM Length = 305 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 61/99 (61%) Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 +V + + +I Y Q +T+ D+A ++ LN +Y IF + ++ K+++T RI+ + Sbjct: 172 HVQEAIAYIKNYYSQKITVEDIANYLALNRSYLYTIFMNSLGISPKEFLTEFRISRGKEQ 231 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 L+ TD S+ +IA++ G+R+S F F + +GM+P QYR Sbjct: 232 LALTDLSVEEIAVSCGYRNSLAFGKVFKQKMGMTPTQYR 270 >UniRef50_C4Z0X2 Two-component system, response regulator YesN n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0X2_EUBE2 Length = 249 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 58/99 (58%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +IAEN+ +T+ DVA H+ LN +Y F+ + +Y+ +R+NH L +TD S Sbjct: 148 YIAENFKNDITLKDVASHLNLNPSYFSSKFKAFNNIGFAEYLRNIRVNHAEWYLIETDLS 207 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 + DIA GF +S+ F TF G+SP ++RK ++ ++ Sbjct: 208 LSDIASECGFCNSNYFGDTFKLVNGISPSEFRKNNKPKK 246 >UniRef50_C8ZWG4 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZWG4_ENTGA Length = 290 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 25/265 (9%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E +G V +++E + ++ I F + PH + + + ++ + Sbjct: 30 HWHKEIEFIYCLEGTVRLGVDDEIIQMHVDEIYFFSSGEPHFFLSSPNSERI-VYQFDIK 88 Query: 102 LFLSW--------PLDKDLINHVTHGM-----VIKSLATQQLSPFEVRRWQQELNSPNEQ 148 LF PL K V + + K + T LS + + Q+E Sbjct: 89 LFQGHDNISPNDRPLAKVFETVVNYSKDWPTPIQKEIQTILLSIYHENQKQREG------ 142 Query: 149 IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSV--SRHAQFYVSQMLGFIAENYDQ 206 Q +I + + K +L P+ KT + +S +R F + +L +I NY Sbjct: 143 -YQYSI--LSSLYKLANLLYQLPLKNKKTEKAALDSTLKNRETLFQIDTILDYIESNYLH 199 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 A+TI DVA+HV + +Y F++ + ++ Y+ RI+ + +L + ++A + Sbjct: 200 AITIQDVADHVGFSPSYFSRFFKKNIGMSFTSYLAEYRIHRAKYILGTELVPMAEVAARS 259 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRK 291 GF S F+ F VG SP +++K Sbjct: 260 GFSSVKTFHHVFKSMVGTSPMKFQK 284 >UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K690_BACHD Length = 530 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 55/93 (59%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 ++ +++ + LT++D+A+H+ L+ Y +F+ LT +Y+T +R+ H + LLS T KS Sbjct: 423 YVHDHFREPLTLDDLAKHIGLSPYYVSKLFKERFDLTFSEYVTQLRVEHAKQLLSLTQKS 482 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + +I G++ + F F K G SP YRK Sbjct: 483 LKEITYEIGYKDPNYFSRVFKKLTGKSPSDYRK 515 >UniRef50_A5Z5Z2 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5Z2_9FIRM Length = 533 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 57/101 (56%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + + + +I ENYD+ +T +AE V L+ Y +F++ M YIT R+ + +L Sbjct: 433 LRKAIKYIKENYDKQITAETLAEVVNLSPVYFSHLFKKQTGKNMTDYITEYRMEIAKKML 492 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 DTDK+I +IA+ GF+ F F + VG +P +YRKL Sbjct: 493 FDTDKTIFEIAVAVGFQDQRYFSKRFKQIVGKTPSEYRKLK 533 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 1/122 (0%) Query: 173 LVNKTSRTHKNSVSRHAQFY-VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 LV RT + Q + ++L FI E+YD+ LTI +A V+++ + F+ + Sbjct: 168 LVKHFPRTEEQKTGTPQQIRQIKKVLQFIDEHYDEKLTIKQLANLVQMSEGHFSRFFKSI 227 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +++T +YI R+N LL +TD++I+DI+++ GF S F F ++ +P ++R+ Sbjct: 228 VRMTAVEYIHTQRLNKAARLLRETDRTIMDISMSVGFDHPSYFIKLFKRHKRCTPSEFRR 287 Query: 292 LS 293 + Sbjct: 288 IG 289 >UniRef50_B8FYL7 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FYL7_DESHD Length = 118 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 60/100 (60%) Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 +V + + F +N ++ L++ V EH+ LN +Y +F+ M T +++ +RI + L Sbjct: 15 HVKKAVDFTYQNLNEELSLERVTEHLNLNKSYFCKLFKHHMGTTYTKFVNELRIEQGKQL 74 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 L +T+ SILDIAL G+ + + F F +++G +P +YRK Sbjct: 75 LLETELSILDIALALGYNNPNYFIKAFKQHLGTTPLKYRK 114 >UniRef50_C7IHS7 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHS7_9CLOT Length = 761 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 60/105 (57%) Query: 188 HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH 247 + ++ ++L +I ENY + + IN +AEHV L+ ++ IF + YI MRI Sbjct: 654 EGKTHIMKILDYIHENYKKDIAINTLAEHVGLSYSHVRKIFNDETGENIVNYINNMRIEE 713 Query: 248 VRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 + LL T+ +I DIAL+ G+ + F F KYVG++P +YR + Sbjct: 714 AQRLLRQTNMNINDIALSLGYNNKQSFNRFFKKYVGINPGEYRSI 758 >UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQR6_BACS4 Length = 302 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 61/104 (58%) Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 YV L FI+ NY++ + + D+AE++ +N +Y IF++ ++++ ++Y+ R++ L Sbjct: 183 YVEHALDFISHNYEKQIKVIDIAEYIGINRSYLTTIFKKSLKVSPQEYLVKYRLDKACTL 242 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 L +TD + +IA G+ ++ F F Y MSP+ YR Q+ Sbjct: 243 LKNTDLLVNEIARNVGYNNALTFSKVFKNYYKMSPKTYRTQHQE 286 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 60/96 (62%) Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 +++ +I +N+ +T+ DVA+HV +++Y +F++ M + +YIT +RI+ + +L + Sbjct: 146 EVVEYIDKNFKNDITLKDVADHVNFSSSYLSKLFKKEMGINFNRYITKIRIDKAKEILIN 205 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 ++ SI +IA + G+ + F F K V M+P +YR Sbjct: 206 SNISINEIAFSVGYNEPNYFCKVFKKIVNMTPSEYR 241 >UniRef50_C0CGQ4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CGQ4_9FIRM Length = 535 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 1/127 (0%) Query: 166 LSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAM 225 +S + +++ + S K ++ ++ Y+SQ +I ++ DQ +T+N+VAE + +N +Y Sbjct: 407 ISTLKHMIIGEISAFQKLQYTKDSR-YISQAKEYIHDHLDQNITLNEVAEMLYINPSYFS 465 Query: 226 GIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMS 285 +F++ T YIT RI + LL D SI +I+ G++ S F F K VG+ Sbjct: 466 TLFKKETGETFSNYITQTRIGRSKELLRDLKYSISEISAMVGYQDSKYFSKVFQKTVGIK 525 Query: 286 PQQYRKL 292 P ++RKL Sbjct: 526 PSKFRKL 532 >UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36471 Length = 287 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 7/127 (5%) Query: 174 VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQ 233 V T T+KN + R + + I +Y + LTI +A+ V+++ Y +F+ + Sbjct: 160 VINTQNTYKNEIVR-------RTVNLIRSSYFEKLTIQWLADQVRVDRTYLYRLFKEEVG 212 Query: 234 LTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 + K+Y+T RI +LS T++SI +I+ GF +S F F KY+G +PQQ+RK+ Sbjct: 213 ICPKEYLTQYRIRMATVMLSTTNQSIKEISYACGFTDTSLFSICFKKYLGFTPQQFRKID 272 Query: 294 QQRRQTF 300 ++ +F Sbjct: 273 GIQQLSF 279 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 17/267 (6%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSM-A 94 + M ++H+H Q E+ G+ Y I + ++ G + L H+ TD T + Sbjct: 26 YTMLSNHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDVHRTTDADTQDHVRV 85 Query: 95 IFNLPMHLFLSWPLDKDLIN--HVTHGMVIKSL-ATQQLSPFEVRRWQQELN--SPNEQI 149 + N LS P L++ + + VI L A QQ + + E+ S Q+ Sbjct: 86 LLNFSKDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVLLDKMIHEIEHQSTGFQV 145 Query: 150 R-QLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQAL 208 Q + ++ + R+ S +L S+ H+ +SQ++ +I NY L Sbjct: 146 ALQALLMDLLVYTSRYIESNRHDVLA-PPSQVHEK---------ISQIVQYINTNYQTPL 195 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 T++ VA++ ++ Y F++ T +YI +RI + LL +T+ ++DI+ GF Sbjct: 196 TLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVGF 255 Query: 269 RSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 S S F F + SP YR+L+ + Sbjct: 256 GSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 7/134 (5%) Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 GL + FSL E + K + N YV +++ +I NY + +N++ E+V Sbjct: 140 GLFYEFFSLIVEENSIEEKDEKNELNP-------YVDKIITYIKNNYWDDINVNNIIEYV 192 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 LN +Y +F++ M +T+++Y+T R++ LL T++SI ++A + G++ F Sbjct: 193 GLNRSYLSTLFKKNMGITIQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFTKA 252 Query: 278 FGKYVGMSPQQYRK 291 + K G++P Q+RK Sbjct: 253 YKKKYGVTPTQHRK 266 >UniRef50_D2LYQ6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYQ6_BACS4 Length = 294 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 59/99 (59%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 ++Q + FI +NY + ++ DVA ++ L+ Y + +F+ M +T QYIT +R+ LL Sbjct: 184 ITQAINFINKNYKASFSVQDVATNINLSKYYFIKLFKESMNMTPGQYITKVRLEQAINLL 243 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 S T+ ++ +IA+ G+ + F F K VG SP ++R+ Sbjct: 244 SHTELTVKEIAMQVGYGDDNYFNKAFRKVVGTSPGEFRR 282 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 47/272 (17%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E+ + G + I N+K +++G +LF T + I Sbjct: 37 HWHKEIEIINIYQGTLYVEIENKKFILSKGD-SLFINSEEMHFMKMNTKEECVI------ 89 Query: 102 LFLSWPLDKDLI-----NHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE 156 +S+ +K LI N++ + + ++LS E+ + E ++LA Sbjct: 90 --ISFVFNKSLICGDKGNNIEQKYIDPLINCKELSALELTK---------EDSKKLA--- 135 Query: 157 IGLMLKRFSLS----GWEPILVNKTSRTHKNSVSRHAQFY-------------VSQMLGF 199 +S S G+E I+ N S N + ++ + + +ML F Sbjct: 136 ----QAYYSYSNNILGYEIIVRNILSEILLNIIRKNQKLLEKSSNNSNTDKERIKRMLAF 191 Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 I +NY + +++ D+A+ + A+ F R + ++ +Y+ RI +L ++++ I Sbjct: 192 IYKNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLLKYRIYTAAEMLRNSEQPI 251 Query: 260 LDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +I L GF S S F F + +G +P++YRK Sbjct: 252 AEICLQTGFNSPSYFSKVFCRMLGTTPREYRK 283 >UniRef50_A9AYE0 Transcriptional regulator, AraC family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AYE0_HERA2 Length = 296 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 63/108 (58%) Query: 188 HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH 247 H Q V Q++ + +N+ +++ND+AE + Y +F+ ++ + +Y+TA+RI+ Sbjct: 18 HQQQAVRQVVETMRQNFWNPMSLNDMAEMANFSPCYFNQVFRSIVGIPPSRYLTALRIDA 77 Query: 248 VRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 + LL DT ++DI G+ S F S F + VG+SPQ +R+L+ Q Sbjct: 78 AKRLLIDTTLRVIDICYEVGYNSLGTFSSRFTELVGISPQGFRELADQ 125 >UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptococcus RepID=C5VY46_STRSE Length = 278 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 70/119 (58%), Gaps = 4/119 (3%) Query: 174 VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQ 233 + KTS H + +FY+ + + F+ NY++A++++D+A+ LN +Y +F+ M Sbjct: 162 LTKTSSKH----DENKEFYIREAINFVERNYEKAISVDDLAQVCNLNRHYFSRLFKEQMN 217 Query: 234 LTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 ++ +Q+I R++ LL +T K++ +IA G+ + F + F ++ +SP ++RK+ Sbjct: 218 ISPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSNQFNFSTAFKRHYQISPNRWRKI 276 >UniRef50_C0AC00 AraC-type DNA-binding domain-containing protein-like protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0AC00_9BACT Length = 340 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 12/179 (6%) Query: 113 INHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPI 172 I H+ HGM + +L + +++ E+ + R+L + L L SL Sbjct: 118 IRHLPHGMTPRH---HEL----IHQFRSEIEN-TRPARRLMTGALALELLVESLRCIHEF 169 Query: 173 LVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVM 232 + NK H + ++ + +I ENY++ LT+ D+A +L+ + +F + Sbjct: 170 ITNK----HPGTTDLPIDIHIRRAKEYILENYEKPLTLADIARSTRLSREHLARLFHQTT 225 Query: 233 QLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 T+ Y+T +RI ++LL DT IA +GF S FY TF K+ G +P +R+ Sbjct: 226 GHTVFDYLTRIRIEAAKSLLCDTTHFANQIATLSGFSSEPLFYRTFKKHTGFTPSVWRR 284 >UniRef50_C6CT66 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CT66_PAESJ Length = 262 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 60/99 (60%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V + + ++ E+ + +T+ D+A+H+ +NA+Y +F+ LT Y+T R+ + LL Sbjct: 154 VKEAIQYLEEHLHEPVTMRDIADHLHMNASYFSVLFKEQTGLTFSDYLTRRRVQRAKELL 213 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++T SI +IA AG++++ F F + G+SP QYRK Sbjct: 214 TNTRLSINEIAEKAGYQTAKYFVKVFRSHEGVSPGQYRK 252 >UniRef50_B0G4U8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0G4U8_9FIRM Length = 540 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%) Query: 197 LGFIAENY-DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT 255 L +I +Y +++LT+ +VA V++NANY IF + M+ T +Y+T R+ R LL DT Sbjct: 441 LEYIQNHYTEESLTLGNVACEVQVNANYLSSIFSQSMEKTFTEYVTEKRMEKARKLLRDT 500 Query: 256 DKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + +IA T G++ S F F K G+SP+ YR Sbjct: 501 TVATAEIAATVGYKDSHYFSFVFKKTQGVSPRDYR 535 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 39/268 (14%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E+ + G + I N+K + +G +LF + I Sbjct: 43 HWHKEIEIITIYKGTLYIEIENKKFTLKKGE-SLFINSEEMHFMRMDAREECRI------ 95 Query: 102 LFLSWPLDKDLI-----NHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE 156 +S+ DK LI + + +I + ++LS E+ E+ Q I Sbjct: 96 --ISFVFDKVLICGEKGSKIDQKYIIPLINCKELSALEL----------TEEDSQKLIQ- 142 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY-------------VSQMLGFIAEN 203 G + G+E ++ N S N V + + + ML FI +N Sbjct: 143 -GYFSYADEILGYEIVIRNVLSEILLNIVRENQELLEKSNGSNNTDRERMKYMLTFIHKN 201 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 Y + +++ D+A+ + A+ F R + + +Y+ RI LL ++ + +I Sbjct: 202 YSEDISLGDIAKEAFIGEREALRCFARTIGTSPIEYLQKYRIYTAAELLRKSELPVTEIC 261 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 L AGF S S F F + +GM+P++YRK Sbjct: 262 LQAGFNSPSYFSKVFCRMLGMTPREYRK 289 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 20/272 (7%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 E R + + HWH VE+ + +G +++ IN+ + + + H + + Sbjct: 21 FEGRDGNYRVSKHWHQSVELFLVLEGTLDFFINSRQYTLKPNDFVIVNPNEIHSI-ECPD 79 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHV----THGMVIKSLATQQLSPFEVRRWQQELNSP 145 + +PM F + D+ I + + +L T +E + L Sbjct: 80 PNITIVLQIPMKSFEGYMSDESRITFADKDESQKARLVALVTAMYRTYEKGEFGYRL--- 136 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 +++ ++ + L++ F + + + V + K +SQ+ ++ ENYD Sbjct: 137 --KVKSQFMEFLYLIVTEFRIEQIDKVRVQQKRHLDK----------LSQVTQYMKENYD 184 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + L++ VA +Y +F+ Q + Y+ +R+ + L ++D+ + DIAL Sbjct: 185 KELSLEMVASRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYVGDIALD 244 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 GF + F F K G P QYRK Q++ Sbjct: 245 HGFADARAFAKAFKKRYGCLPSQYRKQMNQKQ 276 >UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Clostridium difficile RepID=Q184W8_CLOD6 Length = 295 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/294 (20%), Positives = 131/294 (44%), Gaps = 33/294 (11%) Query: 19 LSLYSEYQRM--EIEFRA----PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 +++Y E ++ E FR+ ++ T HWH ++E+ + +G V IN++ + + +G Sbjct: 1 MAIYLEMPKLIHEFPFRSLSNEGEVLTTPHWHKEIEILLITEGVVNLFINDKPMQLKKGE 60 Query: 73 ITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSP 132 I + H + + + + +F + F D L+N ++ + ++ S Sbjct: 61 IVIIKGGDIHYILPSPGSERL-VFQFDISFFN----DLILLNEEKESLINLFSSIKKCS- 114 Query: 133 FEVRRWQQELNSP---------NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSR-THK 182 R W ++ NE + ++ + K ++L PIL + R + Sbjct: 115 ---RDWSAKIRKSVFDILIDIYNEDLYKIEGYSYAIKGKMYNLI---PILYRQIPREIEE 168 Query: 183 NSV-----SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMK 237 N+V S+ ++ + ++ +NY Q + + DV+ V + Y F++ T Sbjct: 169 NTVEYEINSKEILERLNNIFKYVEKNYKQPIKLEDVSYEVGFSVYYFTKFFKKNTGKTFI 228 Query: 238 QYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++ R+ + +L + + SI+D+ GF S+ FY F + +G+SP +++K Sbjct: 229 TFLNEYRLEKAKWILLNNNISIVDLVEEVGFGSTKTFYRVFKEKIGVSPLEFKK 282 >UniRef50_C6D6L1 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6L1_PAESJ Length = 788 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/149 (21%), Positives = 78/149 (52%), Gaps = 9/149 (6%) Query: 149 IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQAL 208 +R +D++ L ++ + + +T+R + Q+L +I N+D+ + Sbjct: 642 LRMETVDDVALAVQDY---------IRETNRRFCAEKRSGPESVAKQILAYIQNNFDKEI 692 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 ++ +A+ ++L+ +YA +F++ + +T Y+ ++R+ + LL ++ ++ DI + G+ Sbjct: 693 SLGGIADQLQLDPSYASRLFKQEISVTFMDYVISLRLEKTKELLKTSELTVKDIGASVGY 752 Query: 269 RSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 + F F KY GM+P +YR + ++ Sbjct: 753 ANQRSFNRIFKKYEGMTPGEYRDIHAPKK 781 >UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7P4_RUMGN Length = 253 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 61/100 (61%) Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 Y++Q + +I +NY LT+ ++A+++ LN +Y +F + +QL+ +Q++T RI L Sbjct: 149 YINQAISYIHKNYQNPLTVQEIADYLSLNRSYLTELFLKTVQLSPQQFLTRYRITKSEEL 208 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 L + SI +IA + G+ SS F F K G+SP +YRK Sbjct: 209 LQSSSLSIQNIAYSCGYSSSFSFSKAFRKVNGLSPSEYRK 248 >UniRef50_C0ZBN7 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBN7_BREBN Length = 396 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 62/120 (51%) Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 H Q +S++ ++ N+D+ L + +A L+ +Y F++ ++ Y+ Sbjct: 3 HNEEYEPSRQMSLSEVRSYMICNFDRPLNVTTLAAMANLSPSYFGDSFKKAYGQSVMDYV 62 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 T++RINH + LL +TD + DIA T G+ F F K VG+SP Y + SQ++ + Sbjct: 63 TSLRINHAKRLLRETDMKLRDIAKTIGYSDEFYFSRKFKKEVGVSPSAYERASQRKVAVY 122 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 60/102 (58%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 +S++ +I ++ + +T++ +A ++ +Y +F++V +++YI +RI + L Sbjct: 178 ISEIASYINCSFQETMTLDGLAGQFYISPSYLSRVFKKVTGFHLQEYIRHIRIREAKKRL 237 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 DTD+ ILDIA GF+ S F F + VG+ P QYRK S+ Sbjct: 238 RDTDEKILDIAADTGFKHISHFNKVFKEIVGIPPLQYRKKSR 279 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 5/115 (4%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 ++ ++ ++ ENY +T+N++AE L+ Y F++ T+ QYI ++R+ H + L Sbjct: 158 ITSIIHYLHENYTYPITLNELAEQFYLSPYYLCREFKKYTNSTIVQYINSLRVGHAQRLF 217 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR-----RQTFPG 302 +TDKS+ +I+ GF + + F + G+SP + RK +++R R PG Sbjct: 218 METDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKSRKQAKERSAAMERHGIPG 272 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 57/99 (57%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + + + +I E+Y++ + + +A V LN +Y IF++ + ++ Y+ +RI + LL Sbjct: 312 IQKCISYINEHYNEDINLETIANIVHLNPSYFSSIFKKEVGVSFSNYLNKIRIEQSKLLL 371 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +TD SI++IAL GF S F F M+P+QYR+ Sbjct: 372 KNTDSSIVEIALEVGFEDQSYFSKVFKNLTKMTPKQYRQ 410 >UniRef50_UPI0001C36B1C two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B1C Length = 505 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 1/99 (1%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + ++ G+I +NY Q L I +AE N +Y +F++ + Y+ +RI + LL Sbjct: 397 IEKLCGYIGKNYRQPLKIETLAEVFGYNGSYLGKLFKQETGESFHSYLDRVRIEKAKKLL 456 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +TD I +A GF+S+ F + F KYVG+SPQ YRK Sbjct: 457 -ETDARIYSVASECGFQSNEYFSNKFKKYVGVSPQAYRK 494 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 107/253 (42%), Gaps = 10/253 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH + E+ G+ +N ++ + G + A H T +F++ Sbjct: 36 HWHTEYEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGILHGGTPIDCVYECIVFDMKSL 95 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID-EIGLM 160 L ++ K + + + + VI SL P + Q N E + Q + E+ Sbjct: 96 LKVNSTCSKQIQDIIHNSKVINSLL-----PTDNLELQTVCNYLFESMAQKKLGYELVTQ 150 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY--VSQMLGFIAENYDQALTINDVAEHVK 218 + L G IL ++ T K + S++ Q +L I + Y LT+ D+++ Sbjct: 151 GSLYHLLGI--ILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQQYPDPLTLEDLSKAAG 208 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 + Y F+ + Q + Y+ RI L T++SI +IAL GF S F TF Sbjct: 209 MTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEIALNCGFNDISYFIKTF 268 Query: 279 GKYVGMSPQQYRK 291 KY G++P+QY K Sbjct: 269 KKYKGVTPKQYLK 281 >UniRef50_A5KIY6 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KIY6_9FIRM Length = 235 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 57/100 (57%) Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 YV+ L +IAE+Y + + D+A + ++ Y +F+ + +T+ YI RINH +L Sbjct: 134 YVAYTLNYIAEHYTEKIIQEDIASQLHISVRYLSKLFKAHIGITLSSYINVYRINHSISL 193 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + +T S+ +IAL +GF +S + F V +P QYRK Sbjct: 194 MQNTKLSLTEIALQSGFTNSQHYSKVFRDCVNTTPSQYRK 233 >UniRef50_UPI0001C36195 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36195 Length = 145 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +I +NYD +L + D+A LN +Y +F+ + + YI +R+ LL +T+ Sbjct: 32 YIEKNYDDSLNVADLARKYGLNVSYLSTLFKERTGINITSYIEGIRMEKAMNLLRETNWK 91 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFPG 302 + ++A G+ +S F F KY G++P +Y ++ ++RR+T PG Sbjct: 92 VTEVAFHVGYSNSGYFSRVFKKYTGVTPGEYGEMEKKRRKT-PG 134 >UniRef50_B4AP12 Periplasmic binding protein n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AP12_BACPU Length = 527 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 1/117 (0%) Query: 182 KNSVSRHAQFYVSQM-LGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 +N + HA Y QM L +IAE+Y Q LT D+A + N +Y F++ + +++ YI Sbjct: 149 QNEKTIHADHYSIQMILQYIAEHYQQELTRKDLAHKMGFNESYFSTFFKKSVGMSVTDYI 208 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 +RI+ + LL TD+ + IA G+ S F F + G SP QYR Q +R Sbjct: 209 AQIRIDEAKKLLFKTDEQVQAIAQRVGYTDSLYFSRKFRQKTGRSPSQYRLSRQPKR 265 >UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAW9_9FIRM Length = 303 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 2/110 (1%) Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 Y+ + +I + + L+I +A +N +Y +F R M T+ YI R+N L Sbjct: 175 YLKKACDYIDRHLLEELSIPAIAACAGVNKSYLQALFSRTMHCTIGSYINQKRLNQAVFL 234 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFP 301 L+++ S+ D+A +G+ S F TF K+ G+SP YR+L RQ P Sbjct: 235 LTNSSLSVTDVAFASGYNSRQHFAHTFQKFYGISPSHYRRL--HSRQLLP 282 >UniRef50_B6FT88 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FT88_9CLOT Length = 293 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 23/267 (8%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQS 92 + PH +P H H +E+ G++E + E ++ +G + + H + +S Sbjct: 35 KKPHHVP-PHLHNAIELVYVTKGELELGVGYELYHMEKGDFAVVFPDLIHHY-QVFSKES 92 Query: 93 MAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQL 152 ++ + L LS P L VIK ++ P+E++ + L S E++ ++ Sbjct: 93 NEVYQIYASLELSGPFMALLQKKCPENPVIK----KENLPYEIKNSLECLIS-GEKVNEI 147 Query: 153 ---AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 A +I L R + E K+SV Y + + ++ ++ + LT Sbjct: 148 VGQAYLQIILYRCRENFRFIE-----------KDSVGSDDLIYAA--MAYLLSHFQEELT 194 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 + VAE + +N IF + QY+ +R+N+ +LL +T+ I DI L AGF Sbjct: 195 LGKVAEALGINKYTLSKIFSGIFHTNFNQYLNEIRLNYATSLLENTEMRITDIYLEAGFE 254 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQQR 296 S F TF + +P +YRKL ++ Sbjct: 255 SQRTFNRTFQQRYNRTPSEYRKLCFEK 281 >UniRef50_A6NS86 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NS86_9BACE Length = 425 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 55/98 (56%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + + + ++ N +T+ D A HV L+ +Y +F+ + + Y+TA+RI+ RA+L Sbjct: 311 ICKAIEYLKRNCRDRVTLEDTAGHVGLSPSYFSRVFKEEVGESFNSYLTALRISRGRAML 370 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 DTD SI +I GF S F F KY G++P ++R Sbjct: 371 LDTDASIAEICDRCGFDDQSYFTKVFRKYTGVTPGRFR 408 >UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IHE3_CLOBU Length = 285 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 57/100 (57%) Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 Y+ + L +I NY + L I+++A + LN Y IF+ + +T +QYI + R+N L Sbjct: 175 YIKKCLNYIEMNYSRKLLISEIAALLGLNTKYFSLIFKESIGVTPQQYIISFRVNKACEL 234 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + + SI DI+ + G+ S F F K GMSP++YR+ Sbjct: 235 MKNFKLSICDISRSVGYDDSLAFSKIFKKQKGMSPKKYRE 274 >UniRef50_UPI0001789626 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789626 Length = 305 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 63/119 (52%) Query: 172 ILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 + + + + S + + FY+ + + ++ +NYD+ + + DVA V L+ Y +F+R Sbjct: 168 VCIARLYEERERSDMQQSDFYIKRSVDYLHQNYDRQIQVKDVAAEVNLHPGYLHRVFRRG 227 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 T+ +Y+T +R+ + LL TD I +I+ G S F+ F KY G +P +YR Sbjct: 228 TGRTITEYLTTIRMEKAKMLLEQTDIPIHEISDYVGVGSRQYFHMLFKKYTGSTPVEYR 286 >UniRef50_B7ANK3 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANK3_9BACE Length = 289 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 20/272 (7%) Query: 25 YQRMEIEFRAPHIMPTS---HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 YQ E E+ + + H H QVE+ G + I++ +N G +++ + P Sbjct: 34 YQNREEEYSVTTTLNNTYPLHLHRQVEMIYVKSGQLRVTIDDNSYVLNAGDLSVAFPNRP 93 Query: 82 HQLTDTGTCQS-MAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQ 140 H G ++ + IFN IN ++ + T+ P E Sbjct: 94 HSTESLGESEAILMIFN--------PEFAGGYINELSRRRPEVPVLTKDTIPHECTYAID 145 Query: 141 ELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFI 200 + R I + G M L P+L ++S +SV ++ +I Sbjct: 146 HILDCCANGRDFRIAQ-GYM--HIILGCIMPLLTMQSSVETGDSVD-----ICHTLIEYI 197 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 A+N+ + ++++ +A + LN Y IF + + Y+ R H LL +T ++ Sbjct: 198 ADNFKEDMSLDTIAHDLGLNKFYISHIFSDKIHESFPAYLGRCRSEHAAHLLKNTHMTVT 257 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 DI +GF SS FY F + G++PQ+YR L Sbjct: 258 DIGYASGFNSSRTFYRAFQRVYGVTPQEYRNL 289 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/271 (22%), Positives = 120/271 (44%), Gaps = 33/271 (12%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++EV G + ++N +N+G + H + GT + I N Sbjct: 45 HWHEEIEVIRVKSGSIHLYLDNSDFVLNEGDGVFINSNILHYIR-AGTSEE-CILN---- 98 Query: 102 LFLSWPLDKDLINHVTHGM--------VIKSLATQQLSPFEVRRWQQELNSP-NEQIRQL 152 S +K+LI+ + ++++ ++ ++ W +E ++ Q Sbjct: 99 ---SLVFNKNLISGGVQSVFEQNFVNPIVENKNLSGIAFYKNTSWGEEASACIKNAFSQF 155 Query: 153 AIDEIG--LMLKRFSLSGWEPIL-------VNKTSRTHKNSVSRHAQFYVSQMLGFIAEN 203 E G ++++ + W +L +NK +R NS + +L F+ +N Sbjct: 156 EKSEFGYEILVREYLSHIWYIMLKNIQDLNLNKNNRNDLNSER------IKNILSFVHKN 209 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 Y++ +T+ND+A+ V L+ + F+ + ++ QYI R++ +L + I I+ Sbjct: 210 YNKQITLNDIAKVVNLSERECLRCFKNTLGISPIQYILKYRVSIATKMLRENKDPITIIS 269 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 GF S S F F +++G++P QYR S+ Sbjct: 270 DAVGFDSPSYFSKIFKRFIGITPTQYRNKSK 300 >UniRef50_UPI0001C36BEF two component AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36BEF Length = 533 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 53/94 (56%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +I +NY Q +++ ++AE N NY +F++ T Y+T +R+ + LL DTD Sbjct: 438 YIKKNYSQKISLEEMAEQGGFNMNYFSELFKKETGKTFTAYVTEVRMEEAKKLLRDTDLP 497 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 + ++A G++ S F F K VG+ P +YRKL Sbjct: 498 VYEVAEAVGYKDSKFFSQQFVKNVGIKPMEYRKL 531 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 115/256 (44%), Gaps = 21/256 (8%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 H H +E+++ +G+ EY++ ++ + G + LF T H G Q ++ +H Sbjct: 30 HHHEFLEISILLEGESEYIVQGQQYHATAGTVFLFNPRTEH-----GEQQKAGTYSHQLH 84 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ--QELNSPNE----QIRQLAID 155 + +S + L +V + F + WQ ELN QI+ L I+ Sbjct: 85 IGISNLYLEGLARNVFPNKSALLDLSHLHGAFLEKAWQIVHELNHQEVESALQIKALVIE 144 Query: 156 EIGLMLKRFSLSGWEPI--LVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDV 213 + +L+ ++ I ++KT + +N V+ H +Y+ ++D+ +T+ + Sbjct: 145 LLVYILRSLAVDQENKIETRLSKTEKRKRNLVN-HTIYYLET-------HHDEEITLEQL 196 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 AE + + Y F+ + Y+ +R+NH + LL + S+ ++A T G+ + Sbjct: 197 AEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLSVKEVAKTVGYEDAYH 256 Query: 274 FYSTFGKYVGMSPQQY 289 F F KY G SP Q+ Sbjct: 257 FSKLFKKYYGKSPSQF 272 >UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDD0_BREBN Length = 298 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 58/99 (58%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 +S+ + FI +Y + +++ D+A L+ Y + +F+ + T QYIT +RI LL Sbjct: 187 ISEAVCFIQAHYKETISLGDIANAAGLSRYYLINLFREYLNTTPLQYITKLRIEKAMDLL 246 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + T+ S+ DIAL G+ +++ F F K +G SP Q+R+ Sbjct: 247 TQTNLSVNDIALAIGYANANYFNKVFKKLIGTSPGQFRE 285 >UniRef50_B8I4H6 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I4H6_CLOCE Length = 760 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 10/140 (7%) Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 +DE GL L L E + + ++ ++L +I +NY + + IN Sbjct: 628 TLDEAGLFLSNIYLQIIE----------YNEMFKVEGKSHIVKILDYIHKNYKKDIAINM 677 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 +AEHV L+ ++ IF + YI MRI + LL T+ +I DIAL+ G+ + Sbjct: 678 LAEHVGLSYSHVRKIFNDETGENIVNYINNMRIEEAQRLLRQTNMNINDIALSLGYNNKQ 737 Query: 273 RFYSTFGKYVGMSPQQYRKL 292 F F KYVG++P +YR + Sbjct: 738 SFNRFFKKYVGINPGEYRNI 757 >UniRef50_UPI0001C365B5 response regulator receiver protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C365B5 Length = 347 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 4/129 (3%) Query: 165 SLSGWEPILVNKTSRTHKNSVSRHAQFY---VSQMLGFIAENYDQALTINDVAEHVKLNA 221 S + W L+ +R H SV+R Q Y ++ L ++ +Y Q L++++VA+ V +N Sbjct: 216 SEAEWSAFLMGYYNRLHL-SVAREHQNYSLIITHALQYLESHYQQELSLSEVAKVVSVNP 274 Query: 222 NYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKY 281 +Y + ++ I R+ H + LL + I ++A +GF+ + FY TF K+ Sbjct: 275 SYLSSLIKKETGKNFIDIIIEARLEHAKKLLQNPSHRINEVADLSGFKDYAYFYQTFKKH 334 Query: 282 VGMSPQQYR 290 VG+SP++YR Sbjct: 335 VGLSPKEYR 343 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 3/126 (2%) Query: 171 PILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQR 230 P ++ KN+++ + + +++ +I +NY + IN +AE + LN Y F++ Sbjct: 157 PYTISTEDELEKNNITFNR---MKKIIEYIEQNYMNEININTLAEILHLNKYYIAHFFKK 213 Query: 231 VMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 L++ QYIT +R+N LL + SI +I L+ GF++ FY F + SP +Y+ Sbjct: 214 HTGLSLGQYITNLRMNKATELLIKNEDSITNIILSCGFKNIKYFYKVFREVYKCSPLEYK 273 Query: 291 KLSQQR 296 Q+R Sbjct: 274 NNRQER 279 >UniRef50_D2LZN1 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZN1_BACS4 Length = 362 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/290 (23%), Positives = 112/290 (38%), Gaps = 34/290 (11%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH VE+ G + E + +++G + PH++ D IF++ Sbjct: 51 HWHEHVEIIYCVRGSFSLRVGGEVMKLSEGDFATINSDVPHEIFDGIEDGLQIIFSVEKS 110 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRR--WQQELNSPNEQIRQLAIDEIGL 159 L ++ + V V K + Q V R W L+ + A + G Sbjct: 111 LLRKEEWEQYQFSTVGDYAVAKDCSDAQQFRKSVARMTWLVTLDRNQMIALEAAHKDFGK 170 Query: 160 MLKRFSLSGWEPI------------------------LVNKTSRTHKNSVSR---HAQFY 192 ++R W + + K KN+V R QF Sbjct: 171 KIER---DEWRELYSSSILQTEEEWYEYQMEVFHCLYCMAKHKSIEKNNVDRLQPKNQFR 227 Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + + I Y L ++E V ++ + Q+ + +++ YI +RI+ V A L Sbjct: 228 LC--IELIHREYGSELDAKKLSEAVGVSEPTIYRMVQKNLGVSLNNYIQMVRIHAVCARL 285 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFPG 302 TD SI ++A GF S S FY F + VG +P+++RK Q + T PG Sbjct: 286 EQTDASITEVAFDCGFTSLSNFYRVFHELVGQTPREFRKGKQTKSVTLPG 335 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 1/134 (0%) Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQM-LGFIAENYDQALTINDVAEHV 217 L LK + + N T R + +R +++ L +I ENY +A++I D+A + Sbjct: 158 LALKGCYFEFFYVLFTNSTVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDIASYC 217 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 + ++ M F+ M ++ Y+ R+N LLS D S+L +A GF + S F Sbjct: 218 GFSESHFMRFFKNTMGVSFVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFNRM 277 Query: 278 FGKYVGMSPQQYRK 291 F K G++P +YR+ Sbjct: 278 FKKKYGVTPSRYRE 291 >UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CVW1_PAESJ Length = 294 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/272 (22%), Positives = 116/272 (42%), Gaps = 42/272 (15%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++++ + G++ IN ++ G H +TD FN P Sbjct: 39 HWHEELQITLATKGNLTIQINGIDYRLHTGQAIFINKSVLHIVTDLTAEGEYVSFNFPEK 98 Query: 102 LFLSW---PLDKDLINHVTHGMVIKSLATQQLSPFEVR---RWQQELNSPNEQIRQLAID 155 L + ++K+ + T+ ++ FE++ WQ+++ ++ Sbjct: 99 LLAFYSDSAMEKNYVLPFTNSYLL---------SFEIKGDTEWQKQI-----------LN 138 Query: 156 EIGLMLKRFSLS---GWE-----------PILVNKTSRTHKNSV--SRHAQFYVSQMLGF 199 + M K F + GW+ IL++ S + S +R Q + ML F Sbjct: 139 ILWSMKKEFEIKKSWGWQYEISIKTVQLWLILISNISLPSEESSKHNRLKQERLQLMLSF 198 Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 I +NY +T+ ++A+ L+ + F+ +++T Y+ RIN LL T+ +I Sbjct: 199 IHQNYSNPITLKEIADAAHLSVSECTRSFKTSIRMTPYSYLVKYRINKSCELLQSTEYTI 258 Query: 260 LDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +IA GF + F F K + ++P+++RK Sbjct: 259 TEIASRVGFNQVNHFIQAFKKDLKLTPKEFRK 290 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 54/98 (55%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + +L +IA N+ + + I D+A + + +Y M F+ M ++ QY+ R+ LL Sbjct: 196 IKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAELL 255 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + T +ILDIA GF + S F F K G+SP++YR Sbjct: 256 TTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR07_9CLOT Length = 515 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 66/118 (55%), Gaps = 2/118 (1%) Query: 173 LVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVM 232 ++++T++ + +H V Q+ +I+ NY +T+ D+A+ + +++ Y +F+ Sbjct: 397 MIDETNQVISGRLEKHD--LVDQISRYISANYQSNITLQDIADQIHISSAYVSRLFRNKT 454 Query: 233 QLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +T+ + I RI+ + LL + + + +IA GF ++ F S F KYVG SP +YR Sbjct: 455 GITITEAINRARIDQAKLLLGNPEYKVYEIAQMVGFEDAAYFTSVFTKYVGCSPSEYR 512 >UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulatory protein n=15 Tax=Bacilli RepID=Q4V1B1_BACCZ Length = 301 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 56/93 (60%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +I ++Y + +T++DVA H+ +N ++ +FQ ++MK +I MRINH LLS T++S Sbjct: 180 YIGKHYIEEITVSDVANHLAVNRSHLSRVFQNHFGISMKDWIIRMRINHAAYLLSMTNES 239 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + +I+ GF S + F F K +P YRK Sbjct: 240 VENISYQVGFHSLAAFSRIFKKVTKETPTHYRK 272 >UniRef50_C3RI67 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RI67_9MOLU Length = 263 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 37/258 (14%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E+ G E +N EK +N + L + + H+L Sbjct: 34 HWHDEIELIYCNQGSFELSVNGEKKFVNTKQLVLINSNSIHRLR---------------- 77 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELN--SPNEQIRQLAI----- 154 FL D+ I + L+T+ F++ + + +L+ EQ+ QL I Sbjct: 78 -FLE---DQTKI-------ITLLLSTELFDEFKLVQCEFDLSLIKDQEQLEQLIIYLGDH 126 Query: 155 -DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDV 213 D+ L++ + +E +L + +K ++++ + Q++ +I ++YD L++ + Sbjct: 127 LDQETLVIHNRMMQIYELLL--EECSVYKLAITKKKLPIIKQIVTYIEQHYDDELSLTIL 184 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 A H + Y +F+ +T+ YI +R+NH L +T +I +IAL GF++ Sbjct: 185 ANHFHFSEVYLSRMFKEKTGITLLSYINKIRLNHAYNDLMNTSLTINEIALNHGFKNVKA 244 Query: 274 FYSTFGKYVGMSPQQYRK 291 F F +Y P +YRK Sbjct: 245 FNKIFKEYYHDIPSKYRK 262 >UniRef50_C9AKD6 AraC-type DNA-binding domain-containing protein n=3 Tax=Enterococcus faecium RepID=C9AKD6_ENTFC Length = 286 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%) Query: 172 ILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 +L+N S ++ +++ +V Q + I EN Q L++ D+A + ++ NY +F+ Sbjct: 156 LLLNSASYLNEGIITKKMNPFVRQTIEIIRENAYQKLSVKDIAVSLSIHENYLSRLFKND 215 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 M +++K+YI+ ++I+ LLS T+ SI I+ GF + F F K G+SP YRK Sbjct: 216 MGISIKEYISEIKISIANDLLSSTEYSIQQISDKIGFSTVQSFSKAFKKANGVSPGVYRK 275 >UniRef50_UPI00016C020E hypothetical protein Epulo_10707 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C020E Length = 420 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 60/99 (60%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + +++ +I Y + ++++ VA+ V L +Y +F++ + QY+ +RI H + LL Sbjct: 320 IRKVINYINTYYAEEISLHKVAKLVHLTPSYFSTVFKKETGYSFTQYLNKVRIEHGKLLL 379 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 DT ++L++A+ GF + + F + F K VG++P Q+RK Sbjct: 380 MDTSMTVLEVAIEVGFDTDTYFCTVFKKVVGVTPNQFRK 418 >UniRef50_Q8EPK8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPK8_OCEIH Length = 769 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 56/96 (58%) Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 +++ I + YD A++++ +A + N NY IFQ+ M+ T +Y+ RIN + L D Sbjct: 667 KIIHIIQKEYDTAISLDSIAARLHYNPNYLSSIFQKEMKTTFSEYLLKYRINIAKKWLVD 726 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 TD S+ DIA+ + +S F +F K G++P ++R Sbjct: 727 TDLSVKDIAIKLQYNNSQNFIRSFRKIEGITPGKFR 762 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 116/272 (42%), Gaps = 32/272 (11%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA-IFNLPM 100 HWH ++E+ G IN EK I + L + H + + MA +F+L M Sbjct: 43 HWHEELEIIYFEQGCFHLEINMEKYEIEEECFCLIKSGDLHYIYSEKDYREMAFVFSLSM 102 Query: 101 -HLFLSWPLDKDLINHVTHG-MVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 F + P+ + L+ + G + + L +Q F + + + Q+A D G Sbjct: 103 LRAFAADPVQEKLVQPLAEGSLSLPGLIYRQNPCFVILK---------REFLQIA-DAAG 152 Query: 159 L------MLKRFSLSGWEPILVNKTSRTHK-NSVSRHAQFYVSQM------------LGF 199 L + ++ +S + K S + + S VSQM L + Sbjct: 153 LPSGASNLRSQYRVSSLPQYMRAKASLLNIFAAFSEQNLLAVSQMPADRRVDTVKKTLSY 212 Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 + E+ + +T+ ++A +N Y F++++ Y+ MRI + LL +TD S+ Sbjct: 213 MQEHMTEKVTMQELAAQANMNEQYFCRFFKKIIGRPPITYLNEMRIRYACRLLKETDHSV 272 Query: 260 LDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +IAL +GF + F TF G +P QYRK Sbjct: 273 TEIALESGFNNLGNFMRTFRLVCGCTPLQYRK 304 >UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFB6_9CLOT Length = 323 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 58/102 (56%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + ++L +I E+Y + ++++AE V +N Y F++ + T+ +YI +R+ L Sbjct: 222 LKKVLQYIGEHYGSPIRLSELAELVNMNEQYFCRYFKKNIGKTITEYINVIRVEKAATAL 281 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 ++T+ I+DIA GF + F F K GM+P +YRK S+ Sbjct: 282 AETEDKIIDIASACGFDNIGYFIRRFKKEKGMTPSEYRKKSK 323 >UniRef50_A6TTD1 Response regulator receiver protein n=3 Tax=Firmicutes RepID=A6TTD1_ALKMQ Length = 263 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 59/99 (59%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + + L F+ EN L++ DVA HV LN++Y +F+ LT +Y+T R+ + + LL Sbjct: 157 IKEALRFVDENGRGQLSLRDVANHVHLNSSYLSVLFKEQTNLTFSEYMTRRRLENAKNLL 216 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 TD +I +IA G++++ F F ++ G++P ++RK Sbjct: 217 MSTDLTIDEIAHEVGYQTAKYFIKLFKEFEGVTPSRFRK 255 >UniRef50_B9MLQ2 Two component transcriptional regulator, AraC family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ2_ANATD Length = 519 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 16/193 (8%) Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 L + LF L +I + ++ +AT S + Q LNS EQI ++ Sbjct: 334 LYIELFGENNLKYKVIKLIIMLLLETGIATSDESIDVEKLISQILNSSYEQIVEI----- 388 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 K+ LS L +K H+ ++ + +++ + FI +NY + +T++ ++ Sbjct: 389 ---FKKAVLS-----LFSKAKTKHEQIINNDS---INKAIEFINQNYSEEITLSQISSTF 437 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 N Y +F++ ++ K Y+T +RI LL +T KSI +I+ GF + F Sbjct: 438 NFNPYYFSKLFKKYTGVSFKTYLTKLRIQKACQLLKNTSKSIKEISFAVGFSDPNYFIKA 497 Query: 278 FGKYVGMSPQQYR 290 F K+ GM+P +R Sbjct: 498 FKKFTGMTPSAFR 510 >UniRef50_C6J603 Transcriptional regulator n=5 Tax=Bacilli RepID=C6J603_9BACL Length = 288 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 24/264 (9%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI-FNLPM 100 HWH ++E+ G V + E V + +G I F + H + + FNL + Sbjct: 30 HWHKEIEIIYSRKGKVNIGVREEIVQLEEGEIFFFPSGEAHYFLASPESERYVYQFNLKL 89 Query: 101 HLFLSWPLDKD-LINHVTHGMVI-----KSLATQQLSPFEVRRWQQELNSPNEQ------ 148 + + +D L+N G + + LA Q+ + + ++ E P Sbjct: 90 FDERTLRISEDSLLNLFETGEPLSRNWPQGLA-QKATELLIHLYEVEQTKPMGMNYLTLG 148 Query: 149 -IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 + QL I E L L R S + +++ HK ++ ++Q+ ++ Y + Sbjct: 149 YLYQL-IGEFYLHLPRRQTSN---LPSKRSTIQHKETLD-----LLNQVFEYVENRYREV 199 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 +T+ DVA+ V + Y F+ T Q++T RIN + +L++ + + ++A AG Sbjct: 200 ITLEDVAKFVGFSPYYFTRFFKANTGQTFMQFLTEYRINQAKFILANENIPMAEVADKAG 259 Query: 268 FRSSSRFYSTFGKYVGMSPQQYRK 291 F S F+ F VG SP QYRK Sbjct: 260 FASVKTFHHVFKDEVGQSPLQYRK 283 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 57/103 (55%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + ML +I ++ + +TI+ +A ++ + + F R + T QY+ RI +L Sbjct: 195 IKTMLQYIQMHFSETITISTLARVALISESEVLRCFHRTIHSTPNQYLKQYRIQKACQML 254 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 DTD + +DIA GF+SSS F TF + +G +P +YRK QQ Sbjct: 255 IDTDMTSIDIAFQCGFQSSSYFTKTFREQIGCTPLEYRKRDQQ 297 >UniRef50_A5N731 Transcriptional regulator n=4 Tax=Clostridium RepID=A5N731_CLOK5 Length = 251 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 57/98 (58%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + +L +I N+++ + +N VA +V LN Y F++ M +T QYIT +R+ + LL Sbjct: 147 IKIILKYIDNNFNRKINLNSVANYVHLNPQYLSRYFKQKMGITFTQYITKLRLEKAKKLL 206 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +TDKSI IAL G+ ++ F F K +SP +++ Sbjct: 207 INTDKSITQIALEVGYVDAAYFSKVFFKNEHLSPYKFK 244 >UniRef50_UPI00017F5E5C putative transcriptional regulator (partial) n=3 Tax=Clostridium difficile RepID=UPI00017F5E5C Length = 246 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 59/103 (57%) Query: 190 QFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVR 249 FYV + + +I +NY + +T++D+ ++LN +Y +F++ T ++ +R+ + Sbjct: 142 SFYVKKTIDYIHKNYSEDITVSDICNDLQLNKSYFCSLFKKESGYTFTNFLNKVRVEKSK 201 Query: 250 ALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 L + D SILD+A+ GF S + + F K+ ++P +Y+ + Sbjct: 202 KYLLEKDLSILDVAVLVGFNSQNYYSMVFKKFNNLTPIEYKNI 244 >UniRef50_A9KIW7 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW7_CLOPH Length = 531 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 1/103 (0%) Query: 199 FIAENY-DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDK 257 +I+ +Y D +L+I D+++HV+L+ +Y +F+ T+ QYIT RI + LLSD Sbjct: 423 YISNHYGDYSLSIKDISDHVRLSFSYLCTVFKTETGETLNQYITNYRIEKAKQLLSDPRN 482 Query: 258 SILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 I++++ G+ ++ F F K VG++P +YR+ R +F Sbjct: 483 KIIEVSSRVGYADNNYFGKIFKKIVGITPSEYREKELGRNTSF 525 >UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8E9_PAESJ Length = 294 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 38/270 (14%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQG------HITLFWACTPHQLTDTGTCQSM 93 HWH +E + DG + + +N E V + +G L + +P D C + Sbjct: 38 ACHWHPDLEFILVLDGYMNFFVNGETVLLEKGTGIFVSSKRLHYGYSP----DKIDCSYI 93 Query: 94 AIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSP--------FEVRRWQQE---- 141 + P L + K ++ P E W ++ Sbjct: 94 VVCIHPSLL-------------GNEQWIGKEYWEEKFGPNTEDFIVLTEHESWHKDALVS 140 Query: 142 LNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 LN E++ + I L+ SL+ + ++ + + + FYV +M FI Sbjct: 141 LNQLYEEMHATKRNPIRLLSIAMSLTA---NIGDRIGEKKEPTAIDPSWFYVWKMTAFIH 197 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 +++ +T++D+A ++ + +F + ++ + Y+ RI LLS+TD+SI + Sbjct: 198 GHFEHKITLDDIAAAGSVSRSQCCILFGKYVEQSPNTYLMKYRIKKSCELLSETDRSISE 257 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 IA++ GF+SSS + F K +G+ P +YR+ Sbjct: 258 IAISCGFQSSSYYTFVFRKELGIVPNEYRR 287 >UniRef50_C5RC38 AraC family transcriptional regulator n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RC38_WEIPA Length = 271 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 1/101 (0%) Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 YV + +++EN+ LTI VA+H+ + Y +FQ++M L+ ++Y+ +RI+H + L Sbjct: 168 YVKPAMTYMSENFATQLTITSVAKHLNVTPQYLDRVFQKIMHLSPQEYLLQIRISHAKKL 227 Query: 252 L-SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 L S ++ +A +GFR ++ F F + G++P +RK Sbjct: 228 LVSQKHLRVVAVANESGFRDAAYFSRIFKRETGVTPLNFRK 268 >UniRef50_C6CTG8 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTG8_PAESJ Length = 255 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 63/99 (63%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 +++++ +I E++ + +T+ +A+ ++++A+Y +F++ T+ YI R+ + LL Sbjct: 151 MNRIIAYIEEHFAEDITLKSLADWIRMDASYVSDLFKKKTGSTLTHYIQNRRVAAAKMLL 210 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++T++++ DI T GF + + F F ++ G++P +YRK Sbjct: 211 AETERTVSDIGRTVGFENDNYFIKIFKRWCGVTPNEYRK 249 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 32/268 (11%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 +H+HG E+ G+ Y I + +I G + L H+ + G + I Sbjct: 34 NHYHGTYEIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVHKTSGHGDPEHERIVINFS 93 Query: 101 HLFLS--WPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 FL PL LA+ L F R L P + I ++++ Sbjct: 94 DSFLGKGHPL----------------LASGLLGMFNQDRPLLRLTVPEQAIIMQILNKMA 137 Query: 159 LMLKRFSLSGWEPIL-------VNKTSR-THKNSVSRHAQF-----YVSQMLGFIAENYD 205 ++ S S +E +L + KT R TH S+ + ++ ++ FI +Y Sbjct: 138 DEIRERSAS-YEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITDVVKFIHVHYA 196 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 +T+ ++E ++ Y IF+ + T+ Y+ RI + LL+DTD I+DIA + Sbjct: 197 DKITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTDLKIVDIAES 256 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 GF S + F TF K + M+ QYRK++ Sbjct: 257 IGFESLTHFDRTFKKIMNMTASQYRKIN 284 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 4/114 (3%) Query: 177 TSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 TS+ +NS A YV + + +I+ NY +T+ D+A ++ L+ ++ FQ ++ ++ Sbjct: 162 TSKPPQNS----ANSYVQKGIEYISANYSYPITVEDIASYIGLSRSHLFRSFQSILGVSP 217 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 K+Y+T RI LL + SI IA + GF +S F TF K G+SP++YR Sbjct: 218 KEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHKIKGLSPKEYR 271 >UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BDP1_9FIRM Length = 321 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 32/280 (11%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ--LTDTGTCQSMAIFNLP 99 HWH ++E+ G +EY++N+++ I++G + H + D C +++ P Sbjct: 43 HWHPEIELTWFVSGQMEYVVNDQRYIISEGEGIFCNSNALHAGYMIDDQDCNYISVTFHP 102 Query: 100 --MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI--- 154 ++ + + L ++ +T SL + P WQ E+ ++I L Sbjct: 103 KFIYGYENSILQTKYVDFITSNEFWSSLVLKPEIP-----WQNEIIEYIKEIYTLTCQVQ 157 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV-------------------SQ 195 + + +P L + R H + Y+ Sbjct: 158 SSSDAFIPGYEGIAEQPELPDYEFRIHLLLCEIWHRLYLHYVQIAQDTPHPQKHLQRLKD 217 Query: 196 MLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT 255 +L ++ E+ + L++ D+A H L + F++ M++T+ Y+ + RI + LL D Sbjct: 218 ILSYLQEHASEELSLEDIAAHAGLCKSECCRFFKKYMRMTIFDYLLSTRIQNSIPLLMDG 277 Query: 256 DKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 + +I IA GF S + + F +Y+GMSP QY+K + Q Sbjct: 278 E-NITTIAGLVGFSSPAYYGQIFKRYIGMSPSQYKKNAAQ 316 >UniRef50_D1VVF4 Two-component response regulator n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVF4_9FIRM Length = 208 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 55/99 (55%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V L +I +NY + +T+ VA + ++ NY +F+ +YI R+N +AL+ Sbjct: 107 VEIALEYINKNYTKKITLQSVASKLHISRNYLCHLFKIKTGYKFCEYINLQRVNKAKALI 166 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + K+ I+ GF S S F +TF KYVG++P +Y+K Sbjct: 167 EEDKKTFEFISFDCGFSSQSHFSTTFKKYVGLTPNEYKK 205 >UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I993_CLOCE Length = 276 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 61/101 (60%), Gaps = 1/101 (0%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA-L 251 ++ ++GFI N+ + +T+ ++A H ++++Y IF++ ++ YI R+N + L Sbjct: 171 LNSIIGFIKNNFKKDITLEELATHAGISSSYLCRIFKKEYGISPFTYILRCRVNAAKEEL 230 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 ++ DKSI I+L GF S S F S F +Y G SP ++R+L Sbjct: 231 INFPDKSIKAISLDTGFNSCSYFGSVFKEYEGYSPNRFREL 271 >UniRef50_B6FQ86 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ86_9CLOT Length = 324 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 13/258 (5%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ-SMAIFNLPM 100 H H +E+ F G ++I+ +V + + TPH + +G + IF LP Sbjct: 65 HTHKYMEIIYMFSGSATHIIDKTEVKLEADDVLFIKQGTPHSASASGYNDIGIKIFVLPE 124 Query: 101 HLFLSWPLDKDLINHVTH-GMVIKSLATQQLSPFEVRRWQ-QELNSPNEQIRQLAIDEIG 158 FL +PL ++N T IK A E + Q+L + + + Sbjct: 125 --FLQYPL--SMLNEDTALRRFIKKAAENDGKDKEFLHFHLQDLPDAQNLLENMTRSLLN 180 Query: 159 LML--KRFSLSGWEPILVNKTSRTHKNSVSRHAQF---YVSQMLGFIAENYDQALTINDV 213 KR + +L+ ++RT+ +V + + V + L +I ENY Q ++N Sbjct: 181 QTRNSKRILQATMGVLLMELSNRTYTITVGSPSSYESQIVLEALRYIEENY-QTASLNKF 239 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 EH L Y + + T +Y+ RI LL++TD I I + G+ +SS Sbjct: 240 CEHHNLPCYYVSRLMTQYSPYTFTKYLQRRRILQAAYLLTETDTPIEQIVVEVGYENSSH 299 Query: 274 FYSTFGKYVGMSPQQYRK 291 F+ F + GM+P++YR+ Sbjct: 300 FHKLFKEEYGMTPKKYRE 317 >UniRef50_A7KH24 NapR1 n=1 Tax=Streptomyces sp. CNQ525 RepID=A7KH24_9ACTO Length = 268 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 60/94 (63%) Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 I E + + L+++D+A+ V+++ + + +F RV +T ++++A+R++ + LL T ++ Sbjct: 12 IRERFFEPLSLDDLAQSVRVSKYHFLRVFTRVTGVTPGRFLSAVRLHEAKRLLLSTSLTV 71 Query: 260 LDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 DI+ G+ S+ F F + VG+SP QYRKLS Sbjct: 72 ADISAQVGYSSTGSFTRRFTESVGLSPTQYRKLS 105 >UniRef50_D1PQY0 DNA-binding response regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQY0_9FIRM Length = 540 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 1/109 (0%) Query: 183 NSVSRHAQFYVSQMLGFIAENY-DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYIT 241 N+ SR + Q + ++ E+Y D++L++N VA + ++ANY +F + M +T +Y+T Sbjct: 426 NASSRQGRSLFRQAVLYLEEHYTDESLSLNQVAREISVSANYLSAVFSQEMGMTFTEYVT 485 Query: 242 AMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 R+ + LL T K ++A G+R F F K G +P+ YR Sbjct: 486 GKRMEKAKELLRTTGKRSGEVAFAVGYRDPHYFSFLFKKTQGCTPRDYR 534 >UniRef50_A6ANN7 Putative melibiose operon regulatory protein n=1 Tax=Vibrio harveyi HY01 RepID=A6ANN7_VIBHA Length = 231 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 54/104 (51%) Query: 188 HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH 247 H V + +I + D T+ +A++V N Y +F+ VM +T+ +I +R+ Sbjct: 126 HNVLMVQRACHYIETHIDDNFTLKQIADYVGTNRTYLTRMFKNVMGITVFNWIKKLRMLK 185 Query: 248 VRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +LL +T S+ DIAL G R S F F Y G++P Q+RK Sbjct: 186 AASLLHETKNSVTDIALDVGIRQVSNFSKMFKSYSGVAPNQFRK 229 >UniRef50_A5I0N6 AraC-family transcriptional regulator n=11 Tax=Clostridium RepID=A5I0N6_CLOBH Length = 252 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 58/100 (58%) Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 ++ + + + NY ++++D++ H+K+N +Y I ++ T Q + +RI + Sbjct: 146 LHIRKAIDLLDANYSDDISLDDISRHLKINKSYFCSILKKETGKTFSQLVNEIRIEKSKE 205 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 LL+ D SIL+IAL+ GF + + F STF K+ +P ++R Sbjct: 206 LLTKNDLSILEIALSVGFNNQNYFSSTFKKFNNKTPIEFR 245 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 5/145 (3%) Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 NE+IR+LA + LM + L+ +E V + + +V AQ V ++ +I ENY+ Sbjct: 155 NEKIRELAT--LALM-QDLWLTFYEN--VKLSDKGDVQTVDEVAQKRVQLIMQYIHENYN 209 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 L+++++A H+ ++ + A+ +F R + T Y+ R+ LL +T+K + IA Sbjct: 210 HNLSLDEIASHIGISKSTALNLFHRFLHTTPVNYLIGYRLQAASWLLKNTNKKVKTIAYE 269 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYR 290 +GF + F F K ++P +YR Sbjct: 270 SGFHNVDYFCRLFKKRYHLTPSEYR 294 >UniRef50_C4FYZ2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYZ2_ABIDE Length = 535 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 57/99 (57%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 +S + F+ NY++ ++INDVAE LN NY +F++ + ++T +R+ + L Sbjct: 431 ISSAIKFMQNNYNKDISINDVAERYNLNINYFSVLFKKKTSRSAINFLTELRMKAAKEYL 490 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +T++++ DI+ G+ + F+ F K G++P YRK Sbjct: 491 KNTEENVADISKKVGYEDTQYFFRVFKKSEGITPLMYRK 529 >UniRef50_B8FUQ5 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUQ5_DESHD Length = 427 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 55/98 (56%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V FI N+ Q LTI D A+H+ ++ ++ +F++ + T Y+T +R+ LL Sbjct: 326 VKDARSFILHNHAQPLTIADAAQHLFISPSHLSRLFRQQLDCTFNDYLTRVRVEKAVELL 385 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + S+ D+AL GF++ S F F KY+G++P YR Sbjct: 386 KKPEFSVKDVALAVGFQNQSHFAKVFRKYIGVTPLVYR 423 >UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococcus RepID=MSMR_STRMU Length = 278 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 64/119 (53%) Query: 173 LVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVM 232 L+ + +H + + YV+Q+ I Y +L +ND+A+ + L+ +Y IF++ Sbjct: 155 LIEEFPLSHLEESNSSTKAYVNQVKKIIHSQYGSSLRVNDIAKKLNLSRSYLYKIFRKST 214 Query: 233 QLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 L++K+YI +R+ + LL + SI +I+ + GF S F F Y G SP ++RK Sbjct: 215 NLSIKEYILQVRMKRSQYLLENPKLSIAEISNSVGFSDSLAFSKAFKNYFGKSPSKFRK 273 >UniRef50_A7B093 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B093_RUMGN Length = 413 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%) Query: 112 LINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEP 171 LIN VT G +S A + S FE R Q +++ ++ I L+ K +G P Sbjct: 195 LINAVTSGR--ESQALEITSKFESRLLPQRISNNLRDMKNYTITLNTLLRKAAEQAGVHP 252 Query: 172 ILVNKTSR---THKNSVSRHAQFYVSQ-------------------------MLGFIAEN 203 I ++ S T S++ Q +Q ++ ++ + Sbjct: 253 IHIDAYSNCNVTMLESLTSATQCLRAQQTIALGYCRIVKEHQHKIHSSIIRKVVAYLETD 312 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 LT+N +A+H+ +NA+Y +F + M ++ Y+ RI+H + LL++TD I DIA Sbjct: 313 LSADLTLNTLAQHLGVNASYLSTLFTKEMGTSLTDYVNHYRIDHAKTLLANTDVPIKDIA 372 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 L G F F + GM+P+ +R+ Sbjct: 373 LRCGIGDVHYFTRLFKRISGMTPKAWRE 400 >UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X9W6_OXAFO Length = 293 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/262 (22%), Positives = 116/262 (44%), Gaps = 21/262 (8%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTC--QSMAIFNLP 99 HWH ++ +G++E +E++ + GH H + +G C +S + Sbjct: 44 HWHEDLQFIYVLEGEIEVRTLDEELKLAAGHGVFINKNVVHSVNQSGDCHYKSFIFPDYF 103 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF-----EVRRWQQELNSPNEQIRQLAI 154 + + P + L++ + M + + P V ++L+ + + + Sbjct: 104 LRFYFGSPAEH-LVDSLVENM---DVPLCRFIPGIGWCDTVLSILRKLSFLEKNGNEFYV 159 Query: 155 DEIGLMLKRFSLSGWEPILVNKT--SRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 E+ + L S W I N + S + VSR Q + L +I ++Y +A++++D Sbjct: 160 YEVLVFLT----SLWLEIRKNVSLPSGKKEKPVSRRMQ----RFLAYIEKHYAEAISLDD 211 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 +A ++ + + F+ MQ T +Y+ R++ LL +TDK + +IA GF +S Sbjct: 212 LAGSGNVSKSECLRCFRVSMQTTPYKYLVEYRLSKAAILLQETDKPVGEIASCTGFHQAS 271 Query: 273 RFYSTFGKYVGMSPQQYRKLSQ 294 F F + G SP+ YR +Q Sbjct: 272 YFGKCFREKTGFSPRDYRGKNQ 293 >UniRef50_A7B0G0 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0G0_RUMGN Length = 289 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 54/98 (55%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 VS L FI ENY L I+ + + + +Y +F++ M +T+ QY+ RI+ + LL Sbjct: 189 VSTALKFIQENYSTTLDIDTICSEISFSKHYFCKLFKKQMGITVHQYVNEYRISKSKELL 248 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 S + SI IA GFR++ F F K + M+P +YR Sbjct: 249 SYSKLSINSIATQVGFRNTLTFLRAFEKSMHMTPSEYR 286 >UniRef50_UPI0001C36481 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36481 Length = 293 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 2/112 (1%) Query: 187 RHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRIN 246 R+A+ +++ +I E+Y + + D+A ++ +Y IF+ V T+ ++I RI Sbjct: 177 RYAK--AREIIQYIMEHYSEVYGLEDLAGIFYMDKSYLSRIFKEVTNFTVNEFINCQRIG 234 Query: 247 HVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 H R +L D S+ +I+ G+ S F F KYVGMSP QYRK +++ + Sbjct: 235 HARDMLLDESLSMEEISQKLGYERLSYFDRVFKKYVGMSPLQYRKSKRKKNE 286 >UniRef50_C7H973 Methylphosphotriester-DNA alkyltransferase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H973_9FIRM Length = 271 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 1/118 (0%) Query: 174 VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQ 233 V + R+ K + R V Q+ ++A NY Q ++ DVA L+ Y +F+RV Sbjct: 151 VEQECRSEKQDI-RPRNETVEQICAYLAANYQQKFSLTDVAARFYLSPYYLSRLFRRVTG 209 Query: 234 LTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++ YI RI + LL TD +I +A GF S++ F F + +G P QYRK Sbjct: 210 QSIVDYINGRRIEAAQRLLESTDLNISAVAEQTGFASAAHFRRVFRETMGTGPLQYRK 267 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 23/263 (8%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 MP H H E+ +G+ Y +++ + +G + + PH L T + + + Sbjct: 29 MPRPHEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMI---VNPHDLHSTASSEKLLFER 85 Query: 98 LPMHLFLSWPLDKD-----LINHVTHGMVIKSLATQ----QLSPFEVRRWQQELNSPNEQ 148 + + ++ D L++H T ++ L Q +L + Q E + Sbjct: 86 VLIGFSRTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSMLAECQTEQTHYSSL 145 Query: 149 IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQAL 208 +R L ++E+ + L R I S+TH+ H + +S++ +I N+ + L Sbjct: 146 VRSL-MNELLIRLHR--------IETTLQSQTHEYEHPMHQK--ISEIAQYIKSNFHEKL 194 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 T+ VA+ ++ +Y +F R+ ++Y+ +RI + +L + S+ I+ AGF Sbjct: 195 TLEQVAKQFYISPSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELAGF 254 Query: 269 RSSSRFYSTFGKYVGMSPQQYRK 291 + F TF K G +P QYRK Sbjct: 255 EHIAHFNKTFKKIAGTTPLQYRK 277 >UniRef50_B5CMC6 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CMC6_9FIRM Length = 309 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 110/269 (40%), Gaps = 14/269 (5%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ--LTDT 87 +E+R H H +E+ G+ I +E ++ G + H L DT Sbjct: 44 VEYRKAGYSFARHLHTNIEIYRILSGECYMDIQSETIHCTAGEFIMLLPDVVHSFYLNDT 103 Query: 88 GTCQSMAI-FNLPMHLFLSWPLDKDLINHVT--HGMVIKSLATQQLS--PFEVRRWQQEL 142 C+ I FN M F + L+ + + +T H ++ + ++ P Q+ + Sbjct: 104 SDCEFQHIHFNPEM--FSTIVLEDEGVFPITLMHAILFSAQFYYRMESDPVIDEHLQKLI 161 Query: 143 NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 + I + L L +++ T H S + YV+ L +I E Sbjct: 162 TLYASSNSLFSAANINVALMNLML-----YILDHTETEHGFSEPQLQNSYVAYTLNYIRE 216 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 N+ Q + D+A + ++ Y IF+ M +T+ YI RIN L+ +T ++ +I Sbjct: 217 NFTQKIRQEDIALQLHISVRYLSKIFKNYMGVTLSNYINIYRINRSIELMQNTSLTLTEI 276 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 AL GF+ S + F + +P YRK Sbjct: 277 ALQVGFKDSQHYSKVFMNVINATPSHYRK 305 >UniRef50_UPI000178819A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178819A Length = 298 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 56/110 (50%) Query: 182 KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYIT 241 KNS + V +L +I E+Y + + +D+ + + N +Y +F ++ T+ +Y+ Sbjct: 183 KNSPHTKSYMKVHALLDYIHEHYAEKIISSDIEQRFECNYDYINRVFAKLTGHTIMRYVN 242 Query: 242 AMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +RINH + L+ T S +I G F F KYVGMSP QY K Sbjct: 243 QVRINHAKELIEATHLSFGEIGYLTGLDDPFYFSKVFKKYVGMSPNQYYK 292 >UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU Length = 267 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 68/120 (56%) Query: 172 ILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 L + T+ ++V+ + YV + + +I NY + +T+N++A+++ LN +Y +F++ Sbjct: 130 FLAKSANITYNDNVAPNYNPYVDKAIEYIQNNYQEMVTVNEIADYLSLNRSYLTTLFKKH 189 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + L+ ++++ R+ LL++TD +I IA + G+ + F F M+P+ YRK Sbjct: 190 LHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKAFSNSHQMAPRDYRK 249 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 112/260 (43%), Gaps = 19/260 (7%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH +VE+ V G +N +N G + + H ++ + +I Sbjct: 39 HWHNEVELIVIKKGQGLVNVNLVTYTVNAGDVVFVFPGQLHSISQ----KDYSIMEYENI 94 Query: 102 LFLSWPLDK---DLINHVTHGMVIKSLATQQLSPFEVRR----WQQELNSPNEQIRQLAI 154 LF S L DL N I+ L + L+ + V + L S +I +L Sbjct: 95 LFKSSLLKSSGYDLCN----DKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCD 150 Query: 155 DE---IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 L +K + + +L++ +S+ A + +L ++AE++ ++I Sbjct: 151 KRPYAYQLAVKSYLFQIFY-LLISNCGLNQIKPISKKALEKIKTILSYVAEHFQDNISIE 209 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 ++A H + +Y M F+ M ++ QY+ R+ LL+ T I++IA+ GF + Sbjct: 210 EIAGHCFYSKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNL 269 Query: 272 SRFYSTFGKYVGMSPQQYRK 291 S F F K G++P +YRK Sbjct: 270 SYFNRCFKKKYGITPGKYRK 289 >UniRef50_C5EPZ4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C5EPZ4_9FIRM Length = 517 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 1/100 (1%) Query: 193 VSQMLGFIAENYDQ-ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 V Q+ FI +NY +L++ DV+EHV L+ +Y +F+ T+ QY+T RI + Sbjct: 415 VFQIKEFIQQNYAAPSLSVPDVSEHVHLSPSYVCTVFKNETGQTLNQYLTDYRIKMSKQF 474 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 LSD I DI+ G+ + + F K VG+SP +YR+ Sbjct: 475 LSDPRYKIADISSKVGYSDGNYYSKAFKKIVGLSPSEYRE 514 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 30/276 (10%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 H M T+H+H E + G+ ++ I + I G + L H+ ++ I Sbjct: 30 HSMDTTHYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSELSQPNHERI 89 Query: 96 ---FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE------VRRWQQELNSPN 146 ++LP LS + L++ I L Q+ E +R Q+ Sbjct: 90 VLHYDLPFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRELQECPPGYQ 149 Query: 147 EQIRQLAIDEIGLM-----LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 +R +A EI L LKR SL E V + V+ ++ I Sbjct: 150 LHVRNMAT-EILLFTARHALKRKSLPSIELTPVQQK---------------VTDIIRHIN 193 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 +++ + L ++++A+ ++ + +F+ V QYI RI LL +TD SI Sbjct: 194 QHFREPLPLDELAKQFFISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQ 253 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 I+ GF + S F F + G+SP+ YRKL Q ++ Sbjct: 254 ISERCGFENFSHFGKVFKELSGLSPRDYRKLEQNQK 289 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 123/263 (46%), Gaps = 31/263 (11%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA-----IF 96 HWH ++E+ +G + I+NE G F+ P +L G+ A +F Sbjct: 35 HWHDELEIIYIRNGSINITIDNELFTGTGGS---FFIVNPGELHYMGSNDLNADYYTILF 91 Query: 97 NLPMHLFLSWPLDKDLI------NHV--THGMVIKSLATQQLSPFEVRRWQQELNSPNEQ 148 L F S ++++ +HV TH + + + +S E + +N + Sbjct: 92 PLEFISFQSNDYVENMLFKPMRSSHVILTHSLPYSEIYAEIISLLEKLIY---INKYEKG 148 Query: 149 IRQLAIDEIGLMLKRFS-LSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 QL D L+L+ S + ILV KTS + + R +++ ++ +NY + Sbjct: 149 FYQL--DCKILLLEILSNILSIPDILVKKTSNA--SDMRR-------EIITYVNDNYLEK 197 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 +T++D+A+ ++ Y F++ +T +Y+ MR+ + + LL T+ SI D+AL++G Sbjct: 198 ITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNISITDVALSSG 257 Query: 268 FRSSSRFYSTFGKYVGMSPQQYR 290 F + S F +F + G +P YR Sbjct: 258 FPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/290 (23%), Positives = 118/290 (40%), Gaps = 36/290 (12%) Query: 16 RSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITL 75 R+ SL S+Y P + +HWH E + +G + Y +N + + +G Sbjct: 24 RAKKSLLSDY---------PTMAAANHWHTDWEFILLLNGKMSYSVNGKSYELQEGQAIF 74 Query: 76 FWACTPHQ--LTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTH--GMVIKSLATQQLS 131 + H D C + I P LI+ +T I + + Sbjct: 75 INSEQMHYGYSADGSDCNFICILFPP-----------SLISSITRIKETYILPVCEDTSN 123 Query: 132 PFEVRR----WQQELNSPNEQIRQLAIDEI-GLMLKRFSLSGWEPILVN-----KTSRTH 181 PF + WQ+ L + + +L +E G L SL + I + K S + Sbjct: 124 PFFILHPEITWQRNLIELLKNVYELCNEEKDGFELHVMSL--FNTICFSLYNNIKDSISI 181 Query: 182 KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYIT 241 + + + M G+I +NY + +T+N++A + + IF+ ++ T Y+T Sbjct: 182 QETADDKKLEAMHNMTGYIQKNYQKRITLNEIAAAGNVCRSSCCDIFKLILNKTPVSYLT 241 Query: 242 AMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 R+ LL + S+ +IAL GF SS F F K +G +P QYR+ Sbjct: 242 EYRLEKSIELLKISSLSVTEIALQCGFTGSSYFTEIFHKTLGCTPSQYRR 291 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 12/146 (8%) Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 E + L +F W L+ + N+ + +M+ +I +NY + +++ + Sbjct: 159 ETKITLIKFIRKMWRNGLILENGTNGTNTTEK-------EMITYIRQNYTREISLKEFGA 211 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 L+ Y F+ +T+ QY+ +R+ H R LL ++ S+ ++A+ +G+++ S F Sbjct: 212 QFHLSEKYISRYFKEHFHITLSQYVNHLRLEHARQLLEESTASVTEVAMCSGYQNVSYFI 271 Query: 276 STFGKYVGMSPQQYRKLSQQRRQTFP 301 +F K G+SP +YR QT P Sbjct: 272 RSFKKMYGVSPLKYRNF-----QTLP 292 >UniRef50_Q9KFT3 Methylphosphotriester-DNA alkyltransferase (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KFT3_BACHD Length = 181 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 56/99 (56%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V + FI+ +Y + L ++ +A + +N Y IF+ +L+ QY+ RI ALL Sbjct: 80 VEKAKAFISAHYTEELNLSVIASQLYVNPFYLRRIFKEETELSPSQYLLKKRIEAALALL 139 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + +++I DIA GF+S + F + F +G+ PQ+YR+ Sbjct: 140 VNQEETITDIAFKVGFKSPAHFSTVFRHMIGLPPQKYRE 178 >UniRef50_C2BXH0 Response regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BXH0_LISGR Length = 495 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%) Query: 170 EPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQ 229 E + ++ K S H Q +L I YDQ L + DVA + +N Y +F+ Sbjct: 368 EETITEIRAQKGKRQYSEHVQ----DVLAIIHNEYDQQLNLKDVANRLHMNTMYVGQLFK 423 Query: 230 RVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQY 289 + + QY+ RI + L DT +I +IA G+ S+ FY +F K G+SP+++ Sbjct: 424 KETNKSFSQYLHQYRIKKAQNFLVDTSDTINEIADKTGYTSAGYFYKSFKKICGISPKEF 483 Query: 290 RKLSQ 294 R+ Q Sbjct: 484 REQYQ 488 >UniRef50_A4XGU9 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XGU9_CALS8 Length = 304 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 2/115 (1%) Query: 177 TSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 T+R K S+ ++ Q++ ++ +NY+Q + + +++ L+ +Y +F++++ Sbjct: 188 TNRAQKESIPVPTDYW--QLVYYVHKNYNQNIDLKTLSKEFHLSPSYISQLFKKLVGSNF 245 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++ +R+ H +LL TDK + DIAL GF S S F F K+ GMS ++RK Sbjct: 246 HNFLIEVRLQHACSLLLSTDKPVTDIALEVGFDSYSTFARVFHKHKGMSALEFRK 300 >UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KND9_9FIRM Length = 298 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 55/103 (53%) Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 Y+S M FI + ++ T+ ++A+++ LN +Y +F+R + + +YI R+ R L Sbjct: 172 YISHMTNFIRTHLEEPFTVQELADYMNLNRSYVTTLFKRYLHCSPHEYIQNCRLTKARHL 231 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 L T S+ IA + G+ S F F + GM+P YR+ Q Sbjct: 232 LETTTFSVESIAYSCGYAKSDSFQRAFLRKAGMTPTAYRRQQQ 274 >UniRef50_B2JAK3 Two component transcriptional regulator, AraC family n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2JAK3_NOSP7 Length = 281 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 56/96 (58%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 FIA NYD+ +++ DVAE + +A Y + + +++++I RI + LL TD+S Sbjct: 163 FIAANYDKPISLCDVAEALGYSATYLTTVVTQTTGKSLQKWIIECRITAAQILLLQTDQS 222 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 + IAL G+ + + FY F Y G SPQ +R++ + Sbjct: 223 VNQIALKVGYENLAHFYRQFRDYHGTSPQVWREVEK 258 >UniRef50_A9KSI4 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSI4_CLOPH Length = 535 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 53/94 (56%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 FI NY + +T+++V+ V NA Y +F++ T +Y++ +RIN + LL DT+ S Sbjct: 440 FIQTNYTRQITLDEVSGKVGFNATYFSSLFKKETGYTFLEYLSEVRINKAKELLKDTNYS 499 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 ++ I G+ F TF K+ + P +YRKL Sbjct: 500 VMAICEHVGYSDIKHFTKTFVKHTNLKPNEYRKL 533 >UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CWX4_9VIBR Length = 316 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 102/255 (40%), Gaps = 17/255 (6%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL-TDTGTCQSMAIFNLP 99 +HWH E G ++ + G + H L + T + + + P Sbjct: 44 AHWHAAAEFICILKGSFAIGVDGNSKTYHSGGMVFLAPNKIHSLQSKTANSRLLTVQFSP 103 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQL---AIDE 156 + L + L V+ +KS Q V W L+ +E + L + Sbjct: 104 L-------LFQQLTGDVSFNYGVKSFEHQSEKDRSV--WDAMLDLASEYVTDLDTISFSH 154 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 + L+ + + ++N T +NSV + + L +I +Y + LT+ D+AE Sbjct: 155 MSLIYRLLANIERVSEVINLT----QNSVRDNDDELIKTCLTYIDSHYMEPLTLTDIAER 210 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 L+ +Y +F+RV K Y+T +R++ LL DT I DIA GF + Sbjct: 211 SGLSYHYVSRMFKRVCGFNFKDYLTFIRVSKALPLLCDTTFPITDIAHKCGFSEHKLLIA 270 Query: 277 TFGKYVGMSPQQYRK 291 F KY +P +RK Sbjct: 271 AFRKYYDQTPTAFRK 285 >UniRef50_C7T9S5 Putative transcriptional regulator n=2 Tax=Lactobacillus RepID=C7T9S5_LACRG Length = 284 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/90 (41%), Positives = 51/90 (56%) Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 E D L I+DVAE VK+ Y IF R + ++ K Y+ +RIN LL +T+ +I D Sbjct: 182 EYADSTLRIDDVAERVKVERTYLYRIFMRNLGVSPKSYLMQLRINQAIELLRNTNDAIGD 241 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 IA+ GF S S+F F K M+P +RK Sbjct: 242 IAIKVGFTSYSQFSKAFVKARRMTPSAFRK 271 >UniRef50_UPI0001692E78 DNA-binding response regulator, AraC family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E78 Length = 520 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 57/100 (57%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V QML + ++Y + +++ ++ + ++ NY +FQ+ M++T +Y+ RI + LL Sbjct: 417 VRQMLDRVQQSYSEEISLKTLSYSMDMHPNYLGQLFQKEMEMTFSEYVNTFRIEKAKHLL 476 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 T+ +IA G+ + FY F KYVG+SP + RK+ Sbjct: 477 LQTELKTNEIAARVGYTDPTYFYRIFKKYVGVSPTELRKM 516 >UniRef50_Q8EL34 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EL34_OCEIH Length = 268 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 1/105 (0%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V Q+ +I Y D+A+ + ++ Y IF+ T QY+T +R+ V+ +L Sbjct: 165 VEQLKHYIDTRYFDIKNAEDIADRMDMSKRYIQSIFKEYYNSTPMQYLTEVRLGLVKQML 224 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 DTDK I+ I GF S S FY F VG+ P YR L+Q+ R Sbjct: 225 VDTDKDIVSICFEVGFESLSTFYRLFKNNVGVPPNMYR-LTQRER 268 >UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=B0P341_9CLOT Length = 282 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 53/262 (20%), Positives = 116/262 (44%), Gaps = 12/262 (4%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 E R + + HWH +E+ F G + + +N+++ + G + + H + Sbjct: 22 FEGRDGNYIREKHWHRSIEIFAVFQGTLGFYLNDQEYLLECGDFIIVNSNEVHSIHAPKE 81 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 ++ + +P+++F + I H + ++ + + + +I Sbjct: 82 NMTV-VLQMPLNMFEKYYTGDQFIC-FAHAPQAQDEQLMEMICEMYMAYSDKHCGYDLKI 139 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 + L D + LM+ R+ P ++++ + K SV + ++ E+Y + L+ Sbjct: 140 QSLFYDMLYLMVTRYREINVHPDILHQHKQLTKLSV----------ITDYMKEHYKEELS 189 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++ +AE + +Y +FQ+ + K Y+ A+R H L +TD +I DI++ GF Sbjct: 190 LSKLAEIFGYSPSYLSRMFQKYAGINYKDYMQAIRTEHGYRQLVETDMTISDISMENGFP 249 Query: 270 SSSRFYSTFGKYVGMSPQQYRK 291 ++ F F K G+ P ++RK Sbjct: 250 NNKAFSKAFYKKYGIMPAEFRK 271 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/265 (22%), Positives = 109/265 (41%), Gaps = 23/265 (8%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E+ G + I+ +K G + + H ++ T F P+ Sbjct: 35 HWHDEMEIIYVRKGPLTVEIDGQKFTGEDGSVFIASPGVLHMMSAPDTPVDYFTFIFPLE 94 Query: 102 LFLSWPLDKDLINHV-------THGM---VIKSLATQQLSPFEVRRWQQELNSPNEQIRQ 151 F+S+ L + V T G V +L P ++ + Q Sbjct: 95 -FISFQTKDALEDEVFFPLRNHTRGFRPEVADRKLLGKLIPILDELVEENGKMGTHRQIQ 153 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 + I + +M S E + N + K ++L +I +NY + + Sbjct: 154 VRIRLLQMMDLLVEYSQLEELTRNASGELEK------------EILLYIQDNYHDNIGLA 201 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 +++EH L+ Y +F +T+ QY+ +R+ + R LL TD S+ +IA+ +G+++ Sbjct: 202 ELSEHFHLSEKYMSRLFSERFHMTLTQYVNYVRLRYARHLLESTDLSVTEIAMKSGYQNV 261 Query: 272 SRFYSTFGKYVGMSPQQYRKLSQQR 296 S F F +G SP +YR +R Sbjct: 262 SYFIRRFSSAMGESPLRYRNGKARR 286 >UniRef50_B0KTA0 Transcriptional regulator, AraC family n=2 Tax=Pseudomonas putida RepID=B0KTA0_PSEPG Length = 351 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 57/102 (55%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V L + N + + I+++AEH L+ + +F+R +Q T +Y +R+ H R LL Sbjct: 239 VRLALELMHANIEDPIGIDEIAEHAGLSRRHLERLFRRHVQATPPRYYLELRLTHARQLL 298 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 T KS+ ++A+ +GF S FY F + ++P+QYR SQ Sbjct: 299 QHTSKSLTEVAVASGFISFPHFYRRFRELFAVAPRQYRARSQ 340 >UniRef50_C2CZA7 AraC family transcriptional regulator n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2CZA7_LACBR Length = 278 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 1/99 (1%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + M+ FI N L+++ +++H LN +Y F+R M L++ +YI+ RIN + LL Sbjct: 181 LQNMIRFIDTNLANDLSLSAISQHFYLNQSYLNRYFKRYMGLSIHKYISESRINQAKILL 240 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 KS+ D GF + S F F +YVG+SP +Y+K Sbjct: 241 K-AGKSVTDACNQCGFGNYSNFIRAFTRYVGISPGKYKK 278 >UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME6_9FIRM Length = 323 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 25/267 (9%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIF- 96 MP+ H H + E+ G Y + +N G + + H+ G S I Sbjct: 62 MPSFHIHHKFEIYYEIAGTCRYFVEGAAYIVNAGSVVMIGENQIHKTASLGDSPSSRIVV 121 Query: 97 ------------NLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNS 144 P F S+ D+ NH+ + +K Q ++ + E S Sbjct: 122 NFSREYLEKVAAAFPEVDFFSFLTDER--NHLLSAITVKQQNHIQSILQQMLDLEGE-TS 178 Query: 145 PNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENY 204 P +Q + +L L + + K VS H V Q+ +IA++Y Sbjct: 179 PEDQALRAM------LLATLLLELKALCVQQQCQGGEKGRVSNHI---VEQIQAYIAQHY 229 Query: 205 DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIAL 264 + LT+ +A ++ Y +F++ L++ +YI +RI + L+ + +SI +A Sbjct: 230 AEKLTLTGIASQFYISPYYLSRLFKKSTNLSLIEYINGVRIKAAQNLIEKSGESISSVAG 289 Query: 265 TAGFRSSSRFYSTFGKYVGMSPQQYRK 291 GF +++ F F G+SPQQYR+ Sbjct: 290 QTGFMTTAHFRRVFKDATGLSPQQYRQ 316 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 55/98 (56%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + +M+ +I E+Y +A+T+ ++AE ++ F+ +++ T Y+++ R+ LL Sbjct: 212 MKKMMQYIVEHYHEAITLKEIAESASISIEECRRCFKDIIKETPMHYLSSYRVMVGMELL 271 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 TD I DIA GF SS F F K GM+P+QYR Sbjct: 272 RTTDLDITDIAFRVGFNDSSYFIQAFKKKNGMTPKQYR 309 >UniRef50_C4ZF62 Two-component sensor response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZF62_EUBR3 Length = 288 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 32/227 (14%) Query: 67 NINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLA 126 NI+ G+ +L W T T +F+ + W +D++ GM + Sbjct: 91 NISSGN-SLPWKTEFATFTGTMAATFREMFDEKEY----WLIDEN------KGMEVSEAI 139 Query: 127 TQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVS 186 + + F+ R ++ L++D G+ML +L ++++ TH N Sbjct: 140 NKAVEDFKERSSDTQM---------LSLDCYGIML----------LLSDQSNHTHDNDDQ 180 Query: 187 RHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRIN 246 + +F + ++ I E+Y ++ ++A+ V ++ Y +F M ++ +Y+T RIN Sbjct: 181 SYVRF-IKPVIDAIEESYIDDISAKELADSVFVSQQYLSRVFTEFMNCSVYEYLTNYRIN 239 Query: 247 HVRALL-SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 + LL ++ + + DIA G+ +S F F K GM+P Q+RKL Sbjct: 240 KAKELLLINSRRKVQDIASDVGYSDASHFIVMFKKLTGMTPTQFRKL 286 >UniRef50_C0EDZ9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDZ9_9CLOT Length = 514 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 10/128 (7%) Query: 173 LVNKTSRTHKNSVSRHAQFYVSQMLGFIAENY--DQALTINDVAEHVKLNANYAMGIFQR 230 LV + S TH ++ A+ YV EN+ D L++ +VA+HV + Y +F+ Sbjct: 385 LVRRKSLTHSQALVDKAKKYV--------ENHYQDPELSLQEVAQHVFVTPQYLSRLFKG 436 Query: 231 VMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 V++++ +Y+T R+ +LL D SI +A G+ S F F K +G+SP ++R Sbjct: 437 VVKVSFTEYVTHYRMQKAVSLLEDVSSSIHTVASEVGYHDSKYFAVCFKKSIGLSPTEFR 496 Query: 291 KLSQQRRQ 298 K R++ Sbjct: 497 KNPHCRKR 504 >UniRef50_B1B7W8 Transcriptional regulator, AraC family protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W8_CLOBO Length = 769 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Query: 193 VSQMLGFIAENYDQAL-TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 V + +I +NY +L ++ V+E+V ++ NY +F+ + ++ +YI R + + L Sbjct: 666 VEKAKNYIEKNYTNSLLSVELVSEYVNISPNYLRTLFKNITGESISKYINICRFENAKKL 725 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 L +TD +ILDI+ G+ +++ FY+ F K G+SP Q+R+ +++ Sbjct: 726 LINTDLTILDISSKVGYSNNNYFYTAFKKTYGISPSQFRRNNKE 769 >UniRef50_C6D143 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D143_PAESJ Length = 536 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 53/92 (57%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 FI E + T+ +AEH LNA+Y +F+R M T+ +++ RI R LL D + Sbjct: 436 FIEERLHEHWTVKQLAEHFNLNASYLSVLFKREMGRTISEFVQDTRIERARKLLQDPNIK 495 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + ++A G ++++ F F K VG++PQ+YR Sbjct: 496 VYEVAEQVGIQTTAYFTYLFKKLVGVTPQEYR 527 >UniRef50_A8RPD4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPD4_9CLOT Length = 532 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 55/94 (58%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +I E+Y + +T+ND+A+ V LN Y +F++ T+ QY+ +RI+ + +L + +++ Sbjct: 437 YIGEHYSENITLNDIADIVFLNPAYLSAMFKKETGQTLTQYLIDVRIDKAKEMLRNPERT 496 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 I +IA G++ F F K G+ P +YR+ Sbjct: 497 IGEIACMVGYQDERHFSKLFSKMTGVKPTEYRRF 530 >UniRef50_A8S1Z0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S1Z0_9CLOT Length = 151 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 54/99 (54%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V L FI + Y + + + D+A ++ + F+ ++ + Y+ R+ LL Sbjct: 49 VRSCLTFIHQEYARKIRLEDIARAASVSTSECCRDFKEILGQSPVDYLITYRVRMGEYLL 108 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + T KSIL+IAL AGF SS F +TF +Y+G +P YRK Sbjct: 109 THTGKSILEIALAAGFSGSSHFSNTFTRYMGCTPLHYRK 147 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 59/101 (58%) Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 FY+ + + +I ++Y +++ +A+ LN NY +F++ + +T Q+I RIN Sbjct: 174 FYIREAIHYIQDHYMDNPSVDQLADICHLNRNYFTRLFKQELHMTPSQFILTYRINQSCE 233 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 LL+ T++SI DIA G+ + F S F + GM+P ++R+ Sbjct: 234 LLASTNRSIRDIADQIGYSNQFNFSSAFKRVKGMTPMEWRR 274 >UniRef50_C6D3S3 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3S3_PAESJ Length = 538 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 21/154 (13%) Query: 159 LMLKRFSLSG--------WEPILVNKT-----SRTHKNSVSRHAQFYVSQMLGFIAENYD 205 L ++RF+ +G W +V K+ S H SV A+ Y+ Q L Sbjct: 388 LSVERFARAGRSAKDALIWIRHIVGKSLDYMNSLEHSPSVVEQAKTYIHQHLA------- 440 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + ++ D+A HV LN +Y IF+R +++ Y+ R+ LL++TD ++ +A Sbjct: 441 EEISREDIASHVYLNPDYLTRIFKRETGMSISDYLLQQRLRIAAELLANTDLAVSAVASR 500 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQT 299 G+ + S F F KY+G++P +YR+ SQ+ RQ+ Sbjct: 501 IGYANFSHFSRIFKKYMGINPLEYRQ-SQESRQS 533 >UniRef50_UPI0001B9ECBE transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECBE Length = 741 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 5/101 (4%) Query: 195 QMLGFIAE-----NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVR 249 +++G I E +D L+++D+A+H+ L+A Y +F + + +I R+ V+ Sbjct: 621 KLIGEIIEYVRYHTHDPMLSVDDIADHIALSAKYVRQLFHEHYGMPLSNFILNERLGKVK 680 Query: 250 ALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 LL T I +IA +GF++ S F++ F K GM+P QYR Sbjct: 681 ELLEQTSMQITEIAEQSGFQTKSHFFTAFKKATGMTPSQYR 721 >UniRef50_A6LQ44 Helix-turn-helix-domain containing protein, AraC type n=3 Tax=Clostridium RepID=A6LQ44_CLOB8 Length = 223 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 58/108 (53%) Query: 183 NSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITA 242 N V F ++++L + N + +++ ++ + L+ Y F++ M +T+ +Y Sbjct: 111 NDVEVKDNFVINRILKHLHLNIESQISLKKLSGELNLSEGYISDCFKKHMGMTIMKYAKK 170 Query: 243 MRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +RI+ + LL T SIL+I LT GF S F+ F + G+SP +YR Sbjct: 171 IRIDRAKVLLVTTTSSILEIGLTLGFHDQSHFHKVFKSFTGVSPSEYR 218 >UniRef50_A5ZM23 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZM23_9FIRM Length = 518 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%) Query: 199 FIAENY-DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDK 257 +I++NY ++ L++ D++ HV L+ +Y F+ T+ QYIT R+ + LL D Sbjct: 421 YISKNYMNETLSVKDISSHVFLSTSYVCTFFKSETGQTLNQYITEYRMEKAKQLLKDARF 480 Query: 258 SILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 I DI+ G+ + F +F KY G+SP +YR+ Sbjct: 481 KITDISSRVGYSDGNYFGKSFKKYSGLSPSEYRE 514 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 35/272 (12%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 M H+H E+ G+ Y I ++ I G + L H+ + +G Sbjct: 27 MDGEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGK-------- 78 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSL---ATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 LS P ++ L+N T V+ +L ++L + L++ +Q+ Q + Sbjct: 79 ------LSQPHERILVNFRTE--VVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLL 130 Query: 155 DEIGLMLKRFSLSGWEPIL-------------VNKTSRTHKNSVSRHAQFY--VSQMLGF 199 + L ++ G+E + H + Y ++++ + Sbjct: 131 ARM-LAEQKQQAGGYEEYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARY 189 Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 I +YD+ L+++D+A L+ Y +F RV LT+ YI +RI ALL +T+ + Sbjct: 190 INAHYDENLSLSDLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPV 249 Query: 260 LDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +IA G++S + F F K +SPQ YR+ Sbjct: 250 TEIAYRVGYQSGTHFGRVFKKAKAVSPQSYRR 281 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 56/262 (21%), Positives = 114/262 (43%), Gaps = 23/262 (8%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++EV G ++ + ++ +N G + + H+ + C+ + +L H Sbjct: 45 HWHEELEVIFLPSGTLDVRVPGKRFRMNAGDCLVINSNILHEAETSNECR---LHSLVFH 101 Query: 102 LFLSWPLDKD---------LINHVTHGMVIKSLATQQLSPFEVRRW---QQELNSPNEQI 149 L D LI+ T V+ + + S +R+ + + N + Sbjct: 102 TDLISGSDSSVFYKKYMYPLISSCTLDCVL--FSAEDTSGVSIRQCFMMAFDALANNREG 159 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 + + E L + ++P + + +++ ++S F + +M+ I Y + L Sbjct: 160 YEFTVRECLSRLCFLLCTFYKPEISDTSAKPDQDS------FRIKEMIHMIQSRYAEPLK 213 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 + D+A+ + + F R + ++ QY+ R++ LL +T+KSI +I+ GF Sbjct: 214 LCDIAQAANIGERECLRCFHRTLGISPMQYLIRYRLSKGALLLINTNKSIAEISTRCGFD 273 Query: 270 SSSRFYSTFGKYVGMSPQQYRK 291 S S F TF + SP++YRK Sbjct: 274 SPSNFSLTFKRKYQCSPREYRK 295 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 55/99 (55%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + + +I E+Y LT+ +VAE+V ++ Y +F+ +T Y+T +RI + + Sbjct: 411 IGKAKDYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDRFGMTFIDYVTEVRIARAKKEM 470 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +D +KS+ +I G+ + F F K+ GMSP +YRK Sbjct: 471 ADPNKSLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRK 509 >UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=Clostridium thermocellum RepID=A3DIQ4_CLOTH Length = 204 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 67/114 (58%), Gaps = 2/114 (1%) Query: 179 RTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQ 238 +T KN +S + F + ++ ++ +++ Q +T+ ++A+ ++ ++ + +F+++ L+ Sbjct: 89 KTEKNLISDN--FEIENIIEYMHQHFGQKITVEELAKKTNMSKSHFIRVFKKITGLSPMD 146 Query: 239 YITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 Y+ +RI + LL K+I +I+ GF S S F STF K VG+SP +Y L Sbjct: 147 YLINIRIEKAKKLLGAGTKNISEISFLCGFNSLSHFSSTFSKIVGVSPSKYNSL 200 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 10/157 (6%) Query: 135 VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVS 194 +RR E+N +E R A+ L+ F+ S + L K R ++ V R + Sbjct: 135 IRRILSEINEMDELERLSAM--FRLLPVIFTSSDY--TLAGKPMRIERD-VRR-----MQ 184 Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 Q+ ++ ++Y ++ ++D+AE V +N + F+R +T Q++T R+N LL + Sbjct: 185 QICAYVMKHYVHSIALDDIAEEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACHLLKN 244 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 T + + +I GF F F +GMSP +YRK Sbjct: 245 TQRGVAEICYMVGFNDLPHFVRVFTNTMGMSPTKYRK 281 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 19/260 (7%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT--CQSMAI-FNL 98 HWH ++++++ G VE+++ + + G H G C AI FN Sbjct: 43 HWHDEIQISIVTKGSVEFIVGEKSYILKNGQAIFINTQRIHMAKSVGDEDCIYHAIMFNA 102 Query: 99 PM-HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEV---RRWQQE-LNSPNEQIRQLA 153 + +F +++ I+ V + + +L+ E+ W+Q+ L ++ I Sbjct: 103 KLLKMFPGSIIEQKYIDPV--------ITSNKLNSIEIYGNNNWEQDALKYISDIINVDI 154 Query: 154 IDEIGLMLKRF---SLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTI 210 I + G LK + +L +K K + + +L FI +NY +T+ Sbjct: 155 IQDKGYELKIYIDLLNFWLLLVLNDKDIFNQKMEPKPINEQRIKDVLSFIHQNYSNKITL 214 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 D+A+ V ++ F++ ++++ Y+ RIN LL ++ SILDI+ GF + Sbjct: 215 QDIADAVFVSKGECCRFFKKSLKMSPYDYLINYRINESMKLLKNSSLSILDISENVGFNN 274 Query: 271 SSRFYSTFGKYVGMSPQQYR 290 S + F K G +P +YR Sbjct: 275 VSHYIQIFKKKTGQTPLEYR 294 >UniRef50_C6PQL0 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQL0_9CLOT Length = 183 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 60/103 (58%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + + L +I +N+++ +++ V++HV LN Y F+ + +Y++ +RI + LL Sbjct: 73 IHEALEYINKNFNKDISLESVSDHVHLNPQYFSRYFKNNTGIKFTEYVSKVRIKEGKKLL 132 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 + TDKS+ I++ G+ + F F KY G+SP +YR + ++ Sbjct: 133 ASTDKSVSRISMDIGYIDPAYFTKVFIKYEGISPHKYRVMKRK 175 >UniRef50_C0C0Y1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0Y1_9CLOT Length = 547 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 8/117 (6%) Query: 175 NKTSRTHKNSVSRHAQFYVSQMLGFIAENYD-QALTINDVAEHVKLNANYAMGIFQRVMQ 233 ++ S RHA L +I NY ++L+++ VA ++A+Y +F + MQ Sbjct: 433 DRRSSYQSGRALRHA-------LEYIDSNYAMESLSLSSVAAEADVSASYLSAVFSQSMQ 485 Query: 234 LTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 T +Y+T R+ + LL TDKS +IAL G++ S F F K G+SP++YR Sbjct: 486 KTFIEYVTEKRMEKAKKLLRATDKSSGEIALEVGYKDSHYFSFVFKKTQGVSPREYR 542 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 64/279 (22%), Positives = 114/279 (40%), Gaps = 24/279 (8%) Query: 25 YQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL 84 Y + R+ HI HWH + + +G+ E+ IN E + + +G H Sbjct: 28 YHTKICDHRSGHI--PLHWHDEFQFVFILEGEAEFHINEETICLKEGDGVFINCGCLHMA 85 Query: 85 TDT-GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELN 143 D GT + N+ H + L ++ H + + W + Sbjct: 86 KDANGTTCTYLCLNVSPHFITANELFTTFVHPYMHASQTPYILLNRKD-----HWPNHIY 140 Query: 144 SPNEQIRQLAIDEI----GLMLKRFSLSGWEPILVNK-----TSRTHKNSVSRHAQFYVS 194 + I++L IDE L L ++ W+ +L N +R H + + Sbjct: 141 QCIQTIQRL-IDETPAYYELELNIQLITMWKCLLQNGFQIKYDARQHDKNER------MK 193 Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 ML +I ++Y + + + D+A +L+ + F+ +++ T Y+ R+ LL + Sbjct: 194 PMLNWIHQHYHEKVLLQDIARAGQLSRSECCRYFKDILKKTPLHYVNEYRVQQSLILLQE 253 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 TD +I +IA GF S+S F S F + +P YRKL Sbjct: 254 TDFNITEIAYKVGFNSTSYFISMFKRIKNTTPLAYRKLK 292 >UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZHR1_EUBR3 Length = 276 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 57/102 (55%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + +L ++A+NY + + + + A+ LN +Y +F++ M +T +Y+ +RINH+ L Sbjct: 174 LKDVLRYVAKNYQEPIALKEAADIASLNQDYFCRMFKKCMGVTFLEYVNQVRINHIHEEL 233 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 T+ SI DI GF + F F GM+P++ RKL + Sbjct: 234 LATEDSITDILEHNGFTNYKVFSRMFKAQFGMTPRELRKLQE 275 >UniRef50_A4XMF1 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF1_CALS8 Length = 518 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 58/103 (56%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 +++ + FI +NY+Q +++ ++ N Y +F++ ++ K Y+T +RI LL Sbjct: 414 INKAIDFINQNYNQEISLAQISAIFNFNPYYFSKLFKKYTGVSYKTYLTKLRIQKACELL 473 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 ++ KSI +IA GF + F F K+VG++P +R + +Q Sbjct: 474 KNSSKSIKEIAFMVGFSDPNYFIKAFKKFVGVTPSFFRNMPEQ 516 >UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUK1_9CLOT Length = 334 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 60/262 (22%), Positives = 116/262 (44%), Gaps = 21/262 (8%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH--QLTDTGTCQSMAIFNLP 99 HWH ++E+ + +G + Y IN++ G + T H ++ + C+ ++I Sbjct: 75 HWHTEIELTLITEGTMVYQINDQIFYPRAGQALFGNSNTMHTGRMENGRDCRYISI---T 131 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID---- 155 H L + I ++++ A + + W E E I + ID Sbjct: 132 FHPRLLYGYQGSRIASRYTDPLMENAALPAVCFDLSQEWHGEAVGLLEDI--IRIDSLRY 189 Query: 156 -----EIGLMLKRFSLSGWEPILVN-KTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 +I + L RF W+ + ++ + R ++ R Q + QML FI ENY +T Sbjct: 190 DTYEMDIQMDLFRF----WKLLYLHCRPDREPAHTAGRKNQERIRQMLSFIHENYQSDIT 245 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++D++ H+ + + +F+ M+ ++ +Y+ RI + + ++ + A+ AGF Sbjct: 246 LDDISRHIHICKSECCRVFKGYMKESLFEYLLKYRIEKSIPDVLEGKLTMTETAIRAGFT 305 Query: 270 SSSRFYSTFGKYVGMSPQQYRK 291 + F F K G SP+ YRK Sbjct: 306 DPNYFSKVFHKIKGCSPRSYRK 327 >UniRef50_C6D7J5 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7J5_PAESJ Length = 544 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 3/115 (2%) Query: 177 TSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 + +TH++S +A F +Q+ GFI +N DQ L++ VA+H N +Y +F+ + Sbjct: 427 SKQTHQSS-QENAVF--NQIKGFIEKNIDQELSLQMVADHFFYNPSYLSRLFKSKLNQNY 483 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++T +RI++ + LL DT++ + D+ G++S F F G +P YR+ Sbjct: 484 LSFVTEIRIDYAKKLLRDTNRLVTDVCTMCGYKSYKHFVKMFRLVAGTTPTDYRR 538 >UniRef50_C9L911 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L911_RUMHA Length = 268 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 1/105 (0%) Query: 190 QFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVR 249 Q YV+ +L I NY + LTI +++ V + Y +FQR + + +Y+T R+N + Sbjct: 164 QRYVAPVLKEIESNYAEELTIQELSHQVFITPQYLTRLFQRFLGCSAYEYLTTWRMNKAK 223 Query: 250 A-LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 LL+ + +IA +GF SS F + F K GM+P ++RKL+ Sbjct: 224 ELLLTFPHAEVQEIARQSGFTDSSHFIAMFKKTTGMTPLEFRKLN 268 >UniRef50_C6D454 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D454_PAESJ Length = 549 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 8/167 (4%) Query: 123 KSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHK 182 K+L SP + L E R + E+ L+ F + +L+ Sbjct: 372 KALKKGNRSPLGTTKDADRLPPRGELNRLGGVGELEKWLQSF----YGVLLILLKEHHAT 427 Query: 183 NSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITA 242 S SRH VSQ +GFI E Y +T+ A + LNA+Y IF+ Q T +Y+ Sbjct: 428 GSYSRH----VSQAIGFILERYSGIVTLELAAGFIGLNASYLSRIFKDETQSTFSEYVNR 483 Query: 243 MRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQY 289 +R++ R LL +I ++ GF + + F+ F + GM+PQ Y Sbjct: 484 VRVDAARRLLESGQYTIKQVSDQVGFTTHNYFFKVFKEVTGMTPQAY 530 >UniRef50_C6CXK7 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CXK7_PAESJ Length = 481 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 57/100 (57%) Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 ++M+ +I +Y+Q L + D++ +N Y +F++ + T +Y++ +RI R LL Sbjct: 382 NRMVAYIDSHYEQKLYLKDLSAQFYINQVYCCQLFKKNLGKTFSEYVSELRIKKARELLK 441 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 TD SI +IA+ G+ F F K+ G++P ++RK S Sbjct: 442 KTDLSIEEIAIQTGYVEYYYFNKVFKKHCGITPSKFRKSS 481 >UniRef50_UPI0001C3522D two-component system, response regulator YesN n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3522D Length = 495 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 3/114 (2%) Query: 178 SRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMK 237 S+T KN S + Q +I +NY Q L++ND++ H ++ NY +F++ + Sbjct: 381 SQTQKNQGSCLKSDKIRQ---YIYQNYTQPLSLNDISSHFYISPNYLCSVFKKETGCNLM 437 Query: 238 QYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++I R+ LL +T+ + IA T GF + S F F Y G SP+ YR+ Sbjct: 438 KFINEYRLEQAAKLLLETEMKVNKIAETVGFSNPSYFSQRFRDYYGESPENYRQ 491 >UniRef50_A4Z280 Putative transcriptional regulator, AraC family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z280_BRASO Length = 304 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 56/97 (57%) Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 Q++ + ++L++ D+A + L+ + +F+R + + +++ RI RALL++ Sbjct: 204 QLVDYFDSRLGESLSVADLAAFLDLSVPHLTELFRRGLGSSPYRWMMQRRIERARALLAE 263 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 D SI DIAL GF SS F + F K G++P +YRK Sbjct: 264 RDHSITDIALALGFASSQHFATAFRKACGLTPSEYRK 300 >UniRef50_A8RIR6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIR6_9CLOT Length = 370 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 3/122 (2%) Query: 172 ILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 I+++ S VSR YV++ + +I +Y++ L+++ VA ++L++ Y +F R+ Sbjct: 245 IVLDAISLLESGDVSR---VYVNKAIQYIQAHYNENLSLDSVANEIELSSPYLSSLFSRI 301 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + T YI ++RI + LL T + +IA G+ F F K G++P Q+R Sbjct: 302 LGTTFVNYIQSVRIQKAKELLCGTTMKVYEIAYCIGYDDEKYFSQVFRKTEGITPSQFRA 361 Query: 292 LS 293 S Sbjct: 362 QS 363 >UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostridium butyricum RepID=B1QUU6_CLOBU Length = 351 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 58/105 (55%) Query: 186 SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRI 245 +R ++ +L +I+ENY + +T+ V++ L+ Y +F++ + YI +I Sbjct: 239 NREVNILLNPVLIYISENYSEKITLESVSKACNLSVFYLSKLFKKNTGMKFIDYINLYKI 298 Query: 246 NHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + LL +TD SI++I+++ G+ S F F K VG++P YR Sbjct: 299 EKAKQLLENTDMSIINISMSLGYDESGYFSKVFKKVVGVTPSAYR 343 >UniRef50_UPI0001973339 hypothetical protein ClM62_17292 n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973339 Length = 225 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 2/112 (1%) Query: 188 HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH 247 H + +MLGFI +Y LT++++A + + FQR ++ QY+ RI Sbjct: 100 HDSVRIRKMLGFIHSHYASGLTLSEIAASAGIGERECLRCFQRSIRTPPMQYLLKYRIMQ 159 Query: 248 VRA-LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK-LSQQRR 297 A LL++ +KSI +A GF S S F F ++ G +P++YR+ L RR Sbjct: 160 GAAMLLAEPEKSIAQVAADCGFDSPSNFSMMFRRFYGQAPREYRRGLKGGRR 211 >UniRef50_C9L8L2 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9L8L2_RUMHA Length = 191 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 60/99 (60%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V+Q+ +I +NY + L+++ +AE V L+ Y IF++ + + ++I A R++ + LL Sbjct: 81 VTQVKNYIYQNYQEELSVDILAEKVYLSPGYLSYIFKQETGMNLNRFIKAFRMDKAKELL 140 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++ K I IA GF ++S F +F +Y G++P+ RK Sbjct: 141 ENSQKKISQIAKEVGFSNNSYFCRSFREYFGVTPESCRK 179 >UniRef50_C5RF55 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RF55_CLOCL Length = 292 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 58/99 (58%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 +++++ +I NY + +TI+D+A NA+Y +F++ T+ +I RI+ ++L+ Sbjct: 185 IARIMEWIKANYYKPITISDIAYEFGYNADYLSSLFRKTSGSTLINFINKTRIDISKSLI 244 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++ D SI + A + GF F TF K+ M+P QY+K Sbjct: 245 TNYDISIKEAAYSCGFTDEKYFLKTFKKFEAMTPSQYKK 283 >UniRef50_C0AAS5 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AAS5_9BACT Length = 371 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 68/110 (61%), Gaps = 1/110 (0%) Query: 182 KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYIT 241 ++SV+R + V + F+ EN+ ++LT+++VA H++L+ + F+++ T+ Y+ Sbjct: 249 QSSVTR-GELIVRRTKEFLFENHRRSLTLDEVARHLRLSPGHVSRAFRQMTGKTVFDYLR 307 Query: 242 AMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +R++ + LL+D+ +++ D+ + GF + + F F + G++PQ YR+ Sbjct: 308 FVRVDIAQQLLADSSRTVADVGRSVGFSTPTLFGRAFKRETGVTPQTYRQ 357 >UniRef50_C5RJU1 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJU1_CLOCL Length = 540 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Query: 189 AQFYVSQMLGFIAENY-DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH 247 + + + +I NY D L IND+ H+ ++ Y +F++ ++T Y+T++R++ Sbjct: 433 CELLIEKAKDYIHRNYSDSELNINDLCNHLHISQTYFSLLFKKETKMTFINYLTSIRMDE 492 Query: 248 VRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + LL TD ++A G+ + F +F +Y+GMSP +YR Sbjct: 493 AKQLLKTTDMKTFEVARKVGYSEPNYFSYSFKRYLGMSPSEYR 535 >UniRef50_B8K3P3 Transcriptional activator n=2 Tax=Vibrio RepID=B8K3P3_VIBPA Length = 306 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 57/103 (55%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 +S++LGFI + D L+++++A + +FQ LT+ Y+ ++++ LL Sbjct: 14 ISKVLGFIHRHLDTPLSLDEIAAQSCWSRWQLQRVFQAETGLTVANYVRQLKLSLAAELL 73 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 DTD+ ++DIAL GF S F F ++ SP+ YRK Q+ Sbjct: 74 LDTDQRVIDIALATGFNSEIAFSRAFKQFFACSPRVYRKAGQR 116 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 57/99 (57%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 ++QM+ FI E Y ++L+I+D+A L+ + F+ V +T +YIT +RIN + LL Sbjct: 199 INQMIAFIHEKYSESLSISDLAGECSLSVFRFIHKFKEVTGMTPMKYITEIRINEAKKLL 258 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 S++ + ++A G+ + F F VG+ P +Y+K Sbjct: 259 SESSLHVKEVAAVVGYDNPLYFSRIFRSTVGIPPSEYKK 297 >UniRef50_D1PQV2 Putative two-component response regulator n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQV2_9FIRM Length = 530 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 52/94 (55%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 ++ ++Y + +T+ DVA N Y +F+R Y+T +R+ + +L +T K+ Sbjct: 435 YVQKHYAEHITLEDVAAMSGFNPTYFSDVFKRKSGKNFSDYLTEVRMAAAKEMLRNTRKT 494 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 + ++A AG++ + F F +Y GM P +YRKL Sbjct: 495 VYEVAEAAGYKDAKYFSQQFARYAGMKPTEYRKL 528 >UniRef50_A4XIH8 Transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XIH8_CALS8 Length = 334 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 1/100 (1%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + +++ I ENYD +++N++A L+ +Y F+ + +T+K+YIT R+ H + Sbjct: 193 LQRIIKLIDENYD-TISVNEIARREHLSLSYLSKYFKNNVGITLKEYITKKRLEHAVKDI 251 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 +TD S+L+IAL GF F ++ M+P Q+RK+ Sbjct: 252 LNTDLSLLEIALKNGFSDEKLLIKCFKEHYNMTPSQFRKM 291 >UniRef50_C9A7I8 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9A7I8_ENTCA Length = 268 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 3/113 (2%) Query: 183 NSVSRHAQF--YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 N +H F Y+ ++ I NYDQA+TI ++A V ++ Y +FQR + + QY+ Sbjct: 154 NPTEKHPLFQQYLVPVIQEIETNYDQAITIKELAGLVYVSPQYLSRLFQRFLGQSTAQYL 213 Query: 241 TAMRINHVRALL-SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 R+ + LL + D I A GF+ +S F + F K VG++P ++R+L Sbjct: 214 LNYRMTRAKELLVAQPDLPIQQAAFAVGFQDASHFTALFKKRVGLTPLKFRQL 266 >UniRef50_Q5WIX4 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIX4_BACSK Length = 765 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 54/100 (54%) Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 +M+ +I ++Y QA+T+ A + NANY +F+ +T +Y+ R+ + L+ Sbjct: 664 KMIDYIHQHYHQAVTLEQCAADLHYNANYLSSVFKEGTAMTFSEYLAQYRLKKAKEWLAK 723 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 T + + IA G+ +S F +F K GM+P QYR+ Q Sbjct: 724 TSEPVKTIAEKLGYNNSQNFIRSFKKMTGMTPGQYRQQKQ 763 >UniRef50_C6CRZ9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRZ9_PAESJ Length = 501 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 1/100 (1%) Query: 193 VSQMLGFIAENY-DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 + Q + +I E+Y D L+I VAE++ LN +Y +F++ T Y+ +++ + L Sbjct: 400 IQQAIDYIEEHYLDSDLSIKQVAENIHLNPSYLSTLFKKETGETFTGYVNKLKLQKAQVL 459 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 L +TD I +I T GF S+ F S F K+ +SP ++R+ Sbjct: 460 LRNTDMKISEICQTVGFEDSTYFSSVFKKHFQISPSEFRQ 499 >UniRef50_B9YDR3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDR3_9FIRM Length = 258 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 2/134 (1%) Query: 164 FSLSGWEPILVNKTSRTHKNSVSRHAQF--YVSQMLGFIAENYDQALTINDVAEHVKLNA 221 FS+ E ++ + + H+ + + + + Q + +I +NY + + + + A+++ + Sbjct: 125 FSVEETEKAVLERLRQIHQEAAADYQRMSPITQQAIAWIKQNYTEEIGLQETADYLGMAP 184 Query: 222 NYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKY 281 Y F R +++++ YIT +RI + LL +T+ I +IA++ G + F F K Sbjct: 185 AYVSRTFSRDLKISLSAYITRLRIERAKLLLMETNMRIAEIAVSVGIVNRDYFSVLFKKN 244 Query: 282 VGMSPQQYRKLSQQ 295 GM PQ YR +Q Sbjct: 245 TGMRPQAYRDCYRQ 258 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 17/168 (10%) Query: 129 QLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSL-----SGWEPILVNKTSRTHKN 183 + P VR ++ L+ N +DE+G + F L + + I K R KN Sbjct: 126 KFGPESVRVIRKTLSEMN------GMDELGRLSAMFRLLPVIFTSSDHIFAGKPMRIEKN 179 Query: 184 SVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAM 243 V R + Q+ ++ ++Y ++ ++D+A V +N + F+R +T Q++T Sbjct: 180 -VRR-----MQQICAYVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQY 233 Query: 244 RINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 R+N LL + K + +I GF F F +GM P +YRK Sbjct: 234 RLNTACDLLKHSQKGVSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRK 281 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 23/262 (8%) Query: 42 HWHGQVEVNVPFDGDVEYL-INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH +E++ G ++ + I+ QG I L + H + A+ Sbjct: 32 HWHESIEISYVLSGKIDDIYIDGIHYTSEQGDIVLINSNAIHSFSVVQGKNRKAVTFFIS 91 Query: 101 HLFL--SWP-LDKDLINHVT------HGMVIKSLATQQLSPFEVRRWQQELNSPNEQIR- 150 + FL ++P +D+ + V+ H + I + + L +R + + I+ Sbjct: 92 YEFLKTNYPDIDQIAFDCVSIDQNDEHKIKIFNELRENLDSI-IRAFSNLRDDSLAHIKV 150 Query: 151 -QLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 L+ + I L+LK F +S ++ ++ ++++ +I ENY Q L+ Sbjct: 151 IGLSYELIYLLLKNFKIS----------KKSFGEIKTKKYLDRLTEITNYIKENYSQDLS 200 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 I+ ++ L+ Y F++ M +T+ YI +R+ L +TD+SI +IAL GF Sbjct: 201 IDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLMNTDQSITEIALEHGFP 260 Query: 270 SSSRFYSTFGKYVGMSPQQYRK 291 + F F + ++P QYRK Sbjct: 261 NEKSFNKVFKTFYNITPNQYRK 282 >UniRef50_C6CXM1 Transcriptional regulator, AraC family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6CXM1_PAESJ Length = 279 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 125/259 (48%), Gaps = 22/259 (8%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI-FN-- 97 SH H E+ + DG+ Y + + ++ G + L H T + +++ FN Sbjct: 31 SHSHDYDELTLVLDGEGYYSSPEQNIKVSAGSLILIPPGLHHGFVCTKPWRGVSVHFNHE 90 Query: 98 -LPM---HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE-QIRQL 152 +P+ +LF + + + I+H+ A S E + W+++ +S + I ++ Sbjct: 91 RIPLQSRYLFHA-GYECNRIHHIQLAEEDTEWAEISYSQLE-KEWKKDRSSMDSFNIMRI 148 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 A + + ++ +R+ L ++T+ ++ Q + ++L I + LT+++ Sbjct: 149 AFETVIVLFQRYQ------ALFSQTAG------GKNDQTVIHEVLKEIHARFYSQLTVHE 196 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 +A ++ + F ++ ++ KQY+ +R+ + LL TDK+I I+ GF SSS Sbjct: 197 LASKHFVSESNLRKKFTEIVGVSPKQYMINLRMEEAKRLLRQTDKAIESISSEVGFTSSS 256 Query: 273 RFYSTFGKYVGMSPQQYRK 291 RFY F K VG++P ++RK Sbjct: 257 RFYDFFVKSVGVTPFEWRK 275 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 54/99 (54%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + ++ +I E+Y L++ VA+ L+ +Y F+ K+YI +RI + LL Sbjct: 175 IQEVATYIYEHYADNLSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLL 234 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +T+KSI DIA GF S+ F F K G+SP +YRK Sbjct: 235 LETNKSITDIAFECGFNDSNYFGDAFRKAKGISPHKYRK 273 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 2/114 (1%) Query: 185 VSRHAQFY--VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITA 242 V R Q Y + + +I +Y + LT+ +VAE ++ Y +F+ +T Y+T Sbjct: 400 VWRQQQAYGKLGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTN 459 Query: 243 MRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 +RI + L++TD+S+ +I + G+ + F F K G+SP +YRK Q R Sbjct: 460 VRIERAKEALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQAR 513 >UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=C7H3E2_9FIRM Length = 306 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 61/99 (61%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + + + ENY+ ++++D AE + ++ N+ + F++ M+++ QYI ++R+ + ++LL Sbjct: 200 IEAAVAYFNENYNTKVSVDDYAESLHISTNWFIRNFKQYMKISPAQYILSLRMVNAQSLL 259 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +T+ +I +IA G+ + F F K G+SP QYRK Sbjct: 260 ENTEYNIGEIAEIVGYDNPLYFSRVFKKEYGVSPAQYRK 298 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 53/93 (56%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +I +Y +++T+ +A + N Y F+ + + QYI RI + LL TD+S Sbjct: 146 YIDAHYRESITLQSIAAELNFNPYYLAHAFREHIGYSPMQYIIRRRIGEAQNLLIGTDRS 205 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 I +IA + G+ +S+ F S F + VGM+P QYR+ Sbjct: 206 ITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYRR 238 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 11/267 (4%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P +HWH + E+ G I+ + G I + H Sbjct: 29 PRYHMITHWHKEYEIIRILSGTFNIKIDAVSYTVKTGDILFLNSGAIHSGIPVDCTYECL 88 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSP-FEVRRWQQELNSPNEQIRQLA 153 +F++ L + ++ +L + + I+ L ++L +++ E+ + QL Sbjct: 89 VFDISSLLQQNSLVNTELNALIHYKKKIQLLFDKKLGAVYDILNQMFEIMKDKKNGYQLR 148 Query: 154 IDEIGLMLKRFSLSGWEPILVNKT--SRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 I G + L + + + + S +K S+SR + ++L FI Y + +++ Sbjct: 149 I--YGNLYYFLGLVEEKNLYIKEKEFSAINKKSLSR-----IKKVLFFIETKYMENISLE 201 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D+A+ +K+N Y F+ + + T +Y+ RI + D SI D+A GF + Sbjct: 202 DMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKFFDSSITDVAYDCGFNDT 261 Query: 272 SRFYSTFGKY-VGMSPQQYRKLSQQRR 297 S F F KY GM+P++Y KL ++ Sbjct: 262 SYFTKVFKKYNSGMTPREYSKLYLKKE 288 >UniRef50_A8VRA2 Methyl-accepting chemotaxis sensory transducer n=2 Tax=Bacillus RepID=A8VRA2_9BACI Length = 262 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 57/99 (57%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + + L FI ++ + I DVA V LN NY F+ + +T +Y+T R+ + ++LL Sbjct: 158 ILEALHFIDDHLSDKIGIKDVAATVHLNPNYLSAHFKEQVGMTFSEYLTRKRLQYAKSLL 217 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 ++ ++ DIA +G++++ F F +Y M+P Q+RK Sbjct: 218 LNSSSTVADIADKSGYQTAKYFVKIFKEYEKMTPSQFRK 256 >UniRef50_UPI0001788F31 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F31 Length = 763 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 6/145 (4%) Query: 154 IDEIGLMLKRFS----LSGW-EPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENY-DQA 207 I I +L+R+S W E I+ S T S + V ++ ++ + D Sbjct: 599 ISSIHQLLERYSTLSEFQAWLESIVTMLASETKVPKSSSRKEEIVLEIKEYVDNHLQDAQ 658 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 L+I VA++ + +Y +F+ +M +++ +YI RI V+ L + S+L+IA G Sbjct: 659 LSIEQVADNFSFSVSYIRQLFKEIMNVSLSEYILQERIEKVKEKLISSQLSVLEIADQCG 718 Query: 268 FRSSSRFYSTFGKYVGMSPQQYRKL 292 F S F+S F K+ ++P+QYR++ Sbjct: 719 FISKGHFFSAFKKFTNLTPKQYREI 743 >UniRef50_C0D789 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D789_9CLOT Length = 535 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 53/94 (56%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +I E+Y ALT+ +V+ L+ Y +F++ +T +Y++ +R++ + LL +T + Sbjct: 440 YIGEHYASALTLEEVSAVAGLSPAYLATVFKKDTGMTFLEYVSKVRMDMAKQLLKETSCT 499 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 + DI G+ F TF KY G+ P +YRKL Sbjct: 500 VADICEKVGYSDVRYFTKTFTKYSGLKPNEYRKL 533 >UniRef50_UPI00017884AA transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017884AA Length = 404 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 59/109 (54%) Query: 187 RHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRIN 246 R + + ++ +I +Y +ALTI +A + Y + +F++ T Y+T +R+N Sbjct: 17 RSGKTSLVEIKEYIDSHYHEALTIGQLAGMANICPKYFVDLFKKTFGQTTIDYLTHVRMN 76 Query: 247 HVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 H + L+++D + DIA G++ F F K VGMSP +Y + S+Q Sbjct: 77 HAKRYLAESDDRLRDIAQKVGYKDEFYFSRIFKKKVGMSPSEYARNSRQ 125 >UniRef50_A9KR90 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KR90_CLOPH Length = 719 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 76/146 (52%), Gaps = 9/146 (6%) Query: 154 IDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDV 213 I++I +LK +S + + +N+ + K + Q++ +I +YD+ +T+ + Sbjct: 284 INDIIALLKEVMISYTKAVAMNRNTIYSKP---------IRQVMEYIQCHYDEKITLEKL 334 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 +E+ +L+ Y + ++ L++ + +RI + LL + + SILD+A GF + Sbjct: 335 SEYTELSTFYLSNLIKKETDLSLPDIVNKVRIEKSKPLLLNMNISILDVAQRVGFNYQNH 394 Query: 274 FYSTFGKYVGMSPQQYRKLSQQRRQT 299 F S F KY ++P +YRK ++ T Sbjct: 395 FASIFKKYTDLTPTEYRKTMSYKQNT 420 >UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE Length = 291 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 53/92 (57%) Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +IA+ +Q + + D+A+ V ++ ++ F++ M LT QY+ RI + LL T +S Sbjct: 198 YIADALEQDIKLADLAQLVGVSQSHFSRQFKKSMGLTPYQYLLQQRIERAKQLLKQTQQS 257 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 ++DIAL GF S S F F K GM+P YR Sbjct: 258 LVDIALVCGFDSHSHFSRQFRKATGMTPSAYR 289 >UniRef50_Q21A44 Two component transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=Q21A44_RHOPB Length = 359 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 63/110 (57%) Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V + + +I N + +T+ D A++ K++A Y +F++ + + Y+T R+ + LL Sbjct: 239 VQKAINYIERNLSKRVTLEDAADYAKISACYLSRMFKKTLDVNFVTYLTTRRMELAKELL 298 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFPG 302 + T++SI +IA + + F +F K +G+SP +YR+ +++ + PG Sbjct: 299 AGTERSITNIAKEFSYNDLNYFCKSFKKEIGVSPSEYRRQAREGQGGAPG 348 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/270 (23%), Positives = 128/270 (47%), Gaps = 19/270 (7%) Query: 34 APHI-MPTSHWHGQ---VEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ-LTDTG 88 +P I +P +++H +E++ G V+YLI EK + +G + + HQ L + Sbjct: 24 SPEIPVPETNYHCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLISNPGVYHQELFEAN 83 Query: 89 T-CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL--SPFEVRRWQQELNSP 145 T C+ + I ++LF + + KD I+ ++ + ++ S E+ Q+ N Sbjct: 84 TNCRELHIGLTNLNLFSN--VKKDYIDIGNKNVLTFTKYKDEILKSCLEIVEEQKTYNQT 141 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHK--NSVSRHAQFYVSQMLGFIAEN 203 + + + + ++ ++L R I T+R K + SR + V + ++ EN Sbjct: 142 SPFMLKSLVMKLLVLLYR-------EINEEDTTRDSKEFSFKSREKKALVESITKYLTEN 194 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 Y + +++ +++++ L+ Y IF+ +M + Y+ +R++ + LL D+ SI IA Sbjct: 195 YTEDISLYTLSKNMYLSPVYISKIFKELMGDSPINYLIQIRLSKAKELLDDSKLSIKSIA 254 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 G+ F + KY G+SP + R S Sbjct: 255 KMVGYSDPYYFSKLYKKYYGVSPNKSRNAS 284 >UniRef50_Q4ZTP2 Helix-turn-helix, AraC type n=23 Tax=Bacteria RepID=Q4ZTP2_PSEU2 Length = 307 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 2/124 (1%) Query: 173 LVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVM 232 L++ T+ H + H+ ++ + +I +Y + L + +VAE++ + Y +F++ Sbjct: 179 LLSGTAVAH--TADEHSVDRTNRAVDYIFAHYGRELPLEEVAEYLGMKPTYFSRVFKQAT 236 Query: 233 QLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 +++ +RI+ LL+D DK + D+ +GF + S F F + GM+P YR+L Sbjct: 237 GRCFVEFVNRLRISKSCELLADGDKPVTDVCFESGFNNISNFNRRFQQLKGMTPSHYRRL 296 Query: 293 SQQR 296 + QR Sbjct: 297 AVQR 300 >UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36461 Length = 276 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 59/116 (50%) Query: 179 RTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQ 238 R+ K V + Y + + FI NY + I+++A +V ++ Y IF ++ KQ Sbjct: 140 RSGKGGVPVDEEGYFKRAVAFIRHNYSYPIQISEIAGYVGIDRTYLYRIFMHQAGVSPKQ 199 Query: 239 YITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 Y++ R+ + +L T+ I +IA + G+ SS F F K G +P +YR + + Sbjct: 200 YLSRYRLEEAKEMLVQTEYRITEIAYSCGYHDSSSFCRHFQKATGNAPARYRSMKK 255 >UniRef50_C6CWR9 Two component transcriptional regulator, AraC family n=2 Tax=Paenibacillus RepID=C6CWR9_PAESJ Length = 540 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 2/136 (1%) Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQFY--VSQMLGFIAENYDQALTINDVAEHVKL 219 +RF + +++ T + S + Q +++ F+ N + L++ + A HV L Sbjct: 398 RRFGIKDLLSVILQVTKAVAEKSTDKKKQSERSMAEAKSFLGRNLYRDLSVEEAATHVGL 457 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 + +Y +F++ T +Y+T R+ ++LL+DT KSI IA G+ F F Sbjct: 458 STSYFSLLFKQTYNETFIEYVTRERMEKAKSLLADTMKSIAQIAKEVGYAERRYFTKVFM 517 Query: 280 KYVGMSPQQYRKLSQQ 295 KY G +P YR QQ Sbjct: 518 KYTGENPTDYRGKHQQ 533 >UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQ90_9FIRM Length = 295 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 21/266 (7%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQG-----HITLFWACTPHQLTDTGTC 90 H+ SHWH ++E DG +++ I + + ++G H + PH D C Sbjct: 36 HLQMISHWHDELEFIYILDGKMDFHIEEKILTASRGDFLAIHASAMRRSAPHNGED---C 92 Query: 91 QSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ--QELNSPNEQ 148 + + P L + + L++ + + SP RR + +E+N NE+ Sbjct: 93 RFIRALIHPSLLTENQSVRNRLLSPLLGNTSRRCFLVPSASPDAPRRGELLREINRINEK 152 Query: 149 -IRQLAIDEIGLM---LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENY 204 + ++ IGL+ L R + + P K ++ AQ +M+ +I+ +Y Sbjct: 153 HLPGFELESIGLLHILLARL-YALFPP---EKQTQEDMPGTDISAQ---RRMVAYISHHY 205 Query: 205 DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIAL 264 + +++ +A ++ + +F++ MQ + ++ R+ R LL T+ SIL+IA Sbjct: 206 PEKISLAGIAAAGSVSRSKCCQLFKKYMQQSPIDFLNRYRLEISRNLLDSTENSILEIAN 265 Query: 265 TAGFRSSSRFYSTFGKYVGMSPQQYR 290 GF S S + F + +P QYR Sbjct: 266 ACGFSSQSYYTKMFSEKFNCTPTQYR 291 >UniRef50_C0D4H9 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4H9_9CLOT Length = 332 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 19/262 (7%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 H H +E + G ++ + +NQG I + PH + G + I + M Sbjct: 73 HIHTVIEFVYVYSGSCTQEVDGRPIQMNQGDICMLDTNIPHSIQSLG--EQDIIITIEMR 130 Query: 102 L------FLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID 155 FL D +INH + A Q F +QE N + I+ + + Sbjct: 131 REYLTQGFLFRLGDYGIINHFLINTLSLDAAHDQYLIFR----KQEENQIHSTIQNILCE 186 Query: 156 EI--GLMLKRFSLSGWEPILVNKTSRTHKN---SVSRHAQFYVSQMLGFIAENYDQALTI 210 G ++ + + +L + R +K+ S ++ + ++LG+I +Y A T+ Sbjct: 187 YYSPGFCSEKI-IDAYMILLFCEILRQYKDQQLSYGKNDGRTIMEILGYIESHYLTA-TL 244 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 D AEH + NY ++ + + K+ I R+N LS+TD I +IA G+ + Sbjct: 245 QDTAEHFGFHPNYLSNYIKKTVGHSFKELIIQQRMNQACFYLSNTDMPIYEIANKIGYNN 304 Query: 271 SSRFYSTFGKYVGMSPQQYRKL 292 FY F M P YR+L Sbjct: 305 LGFFYKKFESLYKMPPSLYRRL 326 >UniRef50_C8P1S0 AraC family DNA-binding response regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1S0_ERYRH Length = 497 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 68/127 (53%) Query: 165 SLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYA 224 S++ +L + T + V + + ++L + ++Y Q +TI+ +A+ + +NA Y Sbjct: 361 SIAEIREVLHHALEATRYDQVLKQHNPNIQKVLQIVLKDYAQDITISSIADTLHMNAMYL 420 Query: 225 MGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGM 284 +F++ + QY+ RI + LL ++ +I +IA G+ SS FY F K G+ Sbjct: 421 GQLFKKETNKSFSQYLNHFRIKEAQNLLLKSNHNINEIAELVGYTSSGYFYKNFKKECGI 480 Query: 285 SPQQYRK 291 SP++YR+ Sbjct: 481 SPKEYRE 487 >UniRef50_A4XN10 Transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XN10_CALS8 Length = 789 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%) Query: 178 SRTHKNSVSRHAQFYVSQMLGFIAENYDQ-ALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 ++T +N + Q+ +I ENY + +TI +A+ V L+ NY IF+ + ++ Sbjct: 667 AKTFENETLVKKKEVAQQVKEYIDENYSRPDITIYTLADKVNLSPNYVRLIFKEIYNISP 726 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 Y+ +R+N + LL TD ++ IA GF + FY TF +Y G + +++RK +Q+ Sbjct: 727 SDYLLEVRMNKAKELLIQTDYTVKKIAELVGFSDNRYFYITFKRYTGKTAEEFRKEHRQK 786 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ACH9 Melibiose operon regulatory protein n=109 Tax=Ga... 410 e-113 UniRef50_D0Z8I6 DNA-binding transcriptional dual regulator n=9 T... 326 4e-88 UniRef50_Q65T74 AraC protein n=2 Tax=Gammaproteobacteria RepID=Q... 299 1e-79 UniRef50_C4L876 Transcriptional regulator, AraC family n=1 Tax=T... 281 2e-74 UniRef50_B8CMD7 Transcriptional regulator, AraC family n=1 Tax=S... 266 8e-70 UniRef50_A8H314 Transcriptional regulator, AraC family n=4 Tax=S... 262 8e-69 UniRef50_B1ZNN6 Transcriptional regulator, AraC family n=1 Tax=O... 250 3e-65 UniRef50_B9K1R2 Transcriptional regulator AraC family n=2 Tax=Ag... 249 9e-65 UniRef50_C6B664 Transcriptional regulator, AraC family n=2 Tax=R... 245 2e-63 UniRef50_A4BGH9 Regulator of melibiose operon n=1 Tax=Reinekea b... 240 6e-62 UniRef50_B6A4E8 Transcriptional regulator, AraC family n=11 Tax=... 237 5e-61 UniRef50_B5JCW6 Transcriptional regulator, AraC family protein n... 236 8e-61 UniRef50_B9JGQ4 Transcriptional regulator protein n=4 Tax=Rhizob... 234 4e-60 UniRef50_Q7US19 Melibiose operon regulatory protein n=1 Tax=Rhod... 234 4e-60 UniRef50_Q7UU63 Melibiose operon regulatory protein n=1 Tax=Rhod... 230 4e-59 UniRef50_Q2S9E7 AraC-type DNA-binding domain-containing protein ... 218 2e-55 UniRef50_B6A065 Transcriptional regulator, AraC family n=1 Tax=R... 214 3e-54 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 211 2e-53 UniRef50_Q2CBW0 Regulatory protein n=1 Tax=Oceanicola granulosus... 210 5e-53 UniRef50_B3C996 Putative uncharacterized protein n=1 Tax=Bactero... 209 8e-53 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 209 9e-53 UniRef50_C7MHG0 Response regulator containing CheY-like receiver... 209 1e-52 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 208 2e-52 UniRef50_B3CFU1 Putative uncharacterized protein n=2 Tax=Bactero... 207 4e-52 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 207 5e-52 UniRef50_C0A1S6 Transcriptional regulator, AraC family n=1 Tax=O... 205 1e-51 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 205 2e-51 UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostri... 205 2e-51 UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostri... 204 3e-51 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 204 3e-51 UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostri... 203 7e-51 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 202 1e-50 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 202 1e-50 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 202 2e-50 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 201 3e-50 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 200 5e-50 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 200 6e-50 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 200 6e-50 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 200 6e-50 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 199 8e-50 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 199 8e-50 UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC... 199 9e-50 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 199 1e-49 UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC... 198 1e-49 UniRef50_Q2S9F0 AraC-type DNA-binding domain-containing protein ... 198 1e-49 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 198 1e-49 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 198 2e-49 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 198 2e-49 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 198 3e-49 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 198 3e-49 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 197 3e-49 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 197 4e-49 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 197 4e-49 UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus s... 197 5e-49 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 197 5e-49 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 197 6e-49 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 196 7e-49 UniRef50_A3I1S3 Melibiose operon regulatory protein n=1 Tax=Algo... 196 8e-49 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 196 8e-49 UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=C... 196 9e-49 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 196 1e-48 UniRef50_Q2CK10 Regulator of melibiose operon n=1 Tax=Oceanicola... 195 1e-48 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 195 1e-48 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 195 1e-48 UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostri... 195 1e-48 UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostri... 195 2e-48 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 195 2e-48 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 194 3e-48 UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 T... 194 4e-48 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 194 4e-48 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 193 4e-48 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 193 5e-48 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 193 5e-48 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 192 1e-47 UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=C... 192 1e-47 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 192 2e-47 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 191 2e-47 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 191 2e-47 UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=B... 191 2e-47 UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=P... 191 3e-47 UniRef50_UPI0001C35ADD AraC family transcriptional regulator n=1... 191 3e-47 UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=C... 190 4e-47 UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Diali... 190 4e-47 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 190 6e-47 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 189 8e-47 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 189 9e-47 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 189 1e-46 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 188 1e-46 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 188 2e-46 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 188 2e-46 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 188 2e-46 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 188 2e-46 UniRef50_C6J603 Transcriptional regulator n=5 Tax=Bacilli RepID=... 188 2e-46 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 188 3e-46 UniRef50_B8I274 Transcriptional regulator, AraC family n=2 Tax=C... 188 3e-46 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 187 3e-46 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 187 4e-46 UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enteroc... 187 4e-46 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 187 4e-46 UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=... 187 4e-46 UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Cl... 187 5e-46 UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostri... 187 6e-46 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 187 6e-46 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 186 8e-46 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 186 8e-46 UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n... 186 8e-46 UniRef50_C0D9W5 Putative uncharacterized protein n=1 Tax=Clostri... 185 2e-45 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 185 2e-45 UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=S... 185 2e-45 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 185 2e-45 UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostri... 184 2e-45 UniRef50_B9Y348 Putative uncharacterized protein n=1 Tax=Holdema... 184 3e-45 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 184 3e-45 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 184 4e-45 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 184 4e-45 UniRef50_UPI0001789626 transcriptional regulator, AraC family n=... 183 4e-45 UniRef50_C3RI67 Transcriptional regulator n=2 Tax=Bacteria RepID... 183 7e-45 UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=B... 183 8e-45 UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 T... 183 8e-45 UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminoc... 183 9e-45 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 183 9e-45 UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=C... 182 1e-44 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 182 2e-44 UniRef50_B7ANK3 Putative uncharacterized protein n=1 Tax=Bactero... 182 2e-44 UniRef50_C8ZWG4 Transcriptional regulator n=1 Tax=Enterococcus g... 181 2e-44 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 181 3e-44 UniRef50_B5CMC6 Putative uncharacterized protein n=1 Tax=Ruminoc... 180 4e-44 UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=C... 180 4e-44 UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=L... 180 6e-44 UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=C... 180 6e-44 UniRef50_UPI0001C3592F AraC-like transcriptional regulator n=1 T... 180 7e-44 UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium re... 179 1e-43 UniRef50_C6CZY9 Transcriptional regulator, AraC family n=1 Tax=P... 179 1e-43 UniRef50_UPI000178A094 transcriptional regulator, AraC family n=... 178 2e-43 UniRef50_UPI0001BC838F helix-turn-helix- domain containing prote... 178 2e-43 UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus c... 177 4e-43 UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryan... 177 4e-43 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 177 4e-43 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 177 4e-43 UniRef50_C6D0F8 Transcriptional regulator, AraC family n=1 Tax=P... 177 4e-43 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 177 6e-43 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 176 9e-43 UniRef50_A6WDN9 Helix-turn-helix-domain containing protein AraC ... 175 1e-42 UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 ... 175 2e-42 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 175 2e-42 UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus g... 175 2e-42 UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bactero... 174 3e-42 UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=C... 174 3e-42 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 174 3e-42 UniRef50_A9VTW6 Transcriptional regulator, AraC family n=9 Tax=B... 174 4e-42 UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacte... 174 4e-42 UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/Xyl... 173 6e-42 UniRef50_UPI0001C36264 transcriptional regulator, AraC family pr... 173 7e-42 UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=P... 173 7e-42 UniRef50_B1MWN3 AraC-type DNA-binding domain-containing protein ... 173 1e-41 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 172 1e-41 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 172 1e-41 UniRef50_B6FQ86 Putative uncharacterized protein n=1 Tax=Clostri... 172 1e-41 UniRef50_D2LZN1 Transcriptional regulator, AraC family n=1 Tax=B... 172 1e-41 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 172 1e-41 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 172 2e-41 UniRef50_A8U727 YfiF n=1 Tax=Carnobacterium sp. AT7 RepID=A8U727... 171 2e-41 UniRef50_A7B6I0 Putative uncharacterized protein n=1 Tax=Ruminoc... 171 2e-41 UniRef50_A9KRM0 Transcriptional regulator, AraC family n=3 Tax=F... 171 2e-41 Sequences not found previously or not previously below threshold: UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 202 1e-50 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 198 1e-49 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 197 4e-49 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 196 9e-49 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 195 1e-48 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 193 9e-48 UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=B... 192 2e-47 UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostri... 191 3e-47 UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 T... 191 3e-47 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 190 4e-47 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 188 2e-46 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 187 5e-46 UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 T... 187 6e-46 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 187 6e-46 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 186 9e-46 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 186 1e-45 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 186 1e-45 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 185 1e-45 UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=... 185 1e-45 UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=B... 185 2e-45 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 185 2e-45 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 184 3e-45 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 184 3e-45 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 184 3e-45 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 183 4e-45 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 183 6e-45 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 183 7e-45 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 183 7e-45 UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blaut... 183 8e-45 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 182 1e-44 UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides Re... 182 2e-44 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 182 2e-44 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 182 2e-44 UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaeros... 181 2e-44 UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enteroc... 181 3e-44 UniRef50_B7C800 Putative uncharacterized protein n=1 Tax=Eubacte... 181 3e-44 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 180 5e-44 UniRef50_B0MHX9 Putative uncharacterized protein n=1 Tax=Anaeros... 180 5e-44 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 180 5e-44 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 180 6e-44 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 180 6e-44 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 180 7e-44 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 179 8e-44 UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=A... 179 1e-43 UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=C... 179 1e-43 UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protei... 179 1e-43 UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=B... 178 2e-43 UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostri... 178 3e-43 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 178 3e-43 UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=C... 178 3e-43 UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=S... 177 4e-43 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 177 5e-43 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 176 7e-43 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 176 7e-43 UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminoc... 176 1e-42 UniRef50_C0WE40 Putative uncharacterized protein n=1 Tax=Acidami... 176 1e-42 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 175 1e-42 UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostri... 175 1e-42 UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=C... 175 1e-42 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 175 1e-42 UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecali... 175 2e-42 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 175 2e-42 UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnos... 175 2e-42 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 175 2e-42 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 175 2e-42 UniRef50_C4Z7H0 AraC family transcriptional regulator, L-rhamnos... 175 2e-42 UniRef50_UPI0001C3636B helix-turn-helix domain-containing protei... 174 4e-42 UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral... 174 4e-42 UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family prot... 174 4e-42 UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotro... 174 4e-42 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 174 4e-42 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 173 5e-42 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 173 5e-42 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 173 7e-42 UniRef50_B0A839 Putative uncharacterized protein n=1 Tax=Clostri... 173 7e-42 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 173 7e-42 UniRef50_A5MLM9 Transcriptional regulator, AraC family (Arabinos... 173 8e-42 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 173 9e-42 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 172 1e-41 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 172 1e-41 UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eu... 172 1e-41 UniRef50_C9LA37 Transcriptional regulator, AraC family n=1 Tax=B... 172 2e-41 UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=P... 171 2e-41 UniRef50_A8S1P5 Putative uncharacterized protein n=2 Tax=Clostri... 171 2e-41 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 171 2e-41 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 171 2e-41 >UniRef50_P0ACH9 Melibiose operon regulatory protein n=109 Tax=Gammaproteobacteria RepID=MELR_ECOL6 Length = 302 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 302/302 (100%), Positives = 302/302 (100%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL Sbjct: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM Sbjct: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT Sbjct: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI Sbjct: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF Sbjct: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 Query: 301 PG 302 PG Sbjct: 301 PG 302 >UniRef50_D0Z8I6 DNA-binding transcriptional dual regulator n=9 Tax=Enterobacteriaceae RepID=D0Z8I6_EDWTE Length = 313 Score = 326 bits (837), Expect = 4e-88, Method: Composition-based stats. Identities = 180/291 (61%), Positives = 223/291 (76%), Gaps = 2/291 (0%) Query: 6 FMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEK 65 MC+S + Q SPL LY+E+QR+ I P M SHWH QVE+N+PFDG+++Y I++ Sbjct: 13 LMCNSTDPQPHSPLMLYTEHQRLTIALCPPQAMAASHWHAQVELNIPFDGEIDYRIHDRT 72 Query: 66 VNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSL 125 + I QGHI LFWACTPH+L D G C+SMA+ +LPMHLFL+WPLD L++H+THG V+ S Sbjct: 73 LRIPQGHIALFWACTPHRLVDPGRCRSMALLSLPMHLFLAWPLDPQLLSHITHGRVLTSA 132 Query: 126 ATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILV--NKTSRTHKN 183 +L+P E+ RWQQ+L SP Q+RQLA DEI LMLKRFSLSGW + + Sbjct: 133 HPARLTPVEIGRWQQDLQSPCPQMRQLASDEILLMLKRFSLSGWHAMQPGGDDPRAGSGQ 192 Query: 184 SVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAM 243 +SRHA FYV QML F A +YD+ALTI VA HV LNA+YAMG+FQRVMQ+T+KQYITAM Sbjct: 193 GLSRHALFYVGQMLTFTAAHYDRALTIEQVARHVGLNAHYAMGLFQRVMQMTLKQYITAM 252 Query: 244 RINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 RI+HVRALLSDTD+++LDIALTAGF SSSRFYSTF KY GMSPQQYR+L++ Sbjct: 253 RIHHVRALLSDTDRTVLDIALTAGFSSSSRFYSTFSKYTGMSPQQYRRLAR 303 >UniRef50_Q65T74 AraC protein n=2 Tax=Gammaproteobacteria RepID=Q65T74_MANSM Length = 360 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 148/294 (50%), Positives = 196/294 (66%), Gaps = 1/294 (0%) Query: 2 NTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAP-HIMPTSHWHGQVEVNVPFDGDVEYL 60 T T + + SPLSL + + +E + P MP HWHG +E+N+PFD DVEY Sbjct: 28 QTSTELADKSGSEIISPLSLSLDARPFNVEIQQPPGNMPAYHWHGHIEINIPFDDDVEYS 87 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 N IN GHI++FWA PH+LTD C++MA+FN+P++ FLSW L ++LINH+THG+ Sbjct: 88 FNEHSTLINAGHISIFWASIPHRLTDKHNCRTMAVFNIPVYQFLSWQLSQNLINHITHGI 147 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 +I+S + +S FEV+RW+QEL + +L DEI LM+KR SL GW +L Sbjct: 148 IIQSKNPRLVSLFEVQRWEQELKLEDPNRHKLVYDEIQLMIKRVSLDGWLLLLEPPKKNN 207 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 H+ S S+HAQ YV ML +IA +Y+ LT+ VA V LN NYAMG+FQ MQLT+KQYI Sbjct: 208 HQLSGSKHAQNYVRTMLDYIANHYNAPLTVQSVANAVGLNTNYAMGLFQSAMQLTIKQYI 267 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 MRINH +ALLSDT++S+LDI+LT GF S SRFY F KY G+SP +YRK + Sbjct: 268 IMMRINHAKALLSDTNRSVLDISLTTGFSSMSRFYDNFLKYTGVSPNKYRKQIR 321 >UniRef50_C4L876 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L876_TOLAT Length = 300 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 123/280 (43%), Positives = 178/280 (63%) Query: 11 DEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQ 70 + SPLS + + +EFR P MP HWH QVEVN+PF G V YLIN++ + + + Sbjct: 2 QDPTEISPLSWLQADEVLSVEFRQPGDMPGYHWHRQVEVNIPFGGPVRYLINDQLIQLPE 61 Query: 71 GHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL 130 GHI LFW PH+L + C M + N+P+ FL P+D L+N V HG V+ S A Sbjct: 62 GHIGLFWGVIPHRLIECENCTQMGVINIPLSRFLGLPVDDLLLNKVLHGSVVISTAKDLF 121 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 E+RRW + + + QL +EI LM+KR ++SGWE +L + H ++ Sbjct: 122 GSHELRRWHNDSLCHSHGLYQLMQEEITLMIKRVAVSGWEELLHTSPGKLHSLQMNERKI 181 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 Y+ QML FIAE+Y +A+ +N+VA V+L+ NYAM +F++VM ++K +IT M++NH RA Sbjct: 182 RYIQQMLSFIAEHYHEAIRVNEVAAKVQLHPNYAMNLFKQVMGYSIKDHITMMKVNHARA 241 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 LL++T++SILDI+LT GF + SRFY +F K VG++P QYR Sbjct: 242 LLAETNRSILDISLTTGFSAMSRFYESFHKLVGVTPHQYR 281 >UniRef50_B8CMD7 Transcriptional regulator, AraC family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CMD7_SHEPW Length = 302 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 97/278 (34%), Positives = 153/278 (55%) Query: 14 QTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHI 73 + SPL + + P IMPTSHWHG +E+N F+ +YLIN + +++ +G + Sbjct: 11 KENSPLETQAHESNFGFQRHKPEIMPTSHWHGHIEINYLFNCSADYLINGKHISVPEGKM 70 Query: 74 TLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF 133 LFWA PHQ+ M +P++ FLSW + D I+++ HG V+ + Sbjct: 71 ILFWASIPHQMVAYEGDGEMVNIYIPLNAFLSWKMSNDFISNILHGEVLVAENLHASDKV 130 Query: 134 EVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV 193 + WQ +L + IDEI ++R S+ + +N+ S ++ Sbjct: 131 ITQLWQDDLQKKEIYLTMQVIDEIRNRIRRMSMESYSTFDLNRNSNKQDRKSLVSGLPHI 190 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 +L +IA+NYDQ +TI+DVA+ L+ NY M +FQ +M++++KQYI +R+ H +ALL Sbjct: 191 QTILKYIADNYDQKITIDDVAKLTGLHPNYVMKLFQGIMKISIKQYINQLRLQHAQALLV 250 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 DT+ +L+IAL AGF S SRFY F + M+P Q+R Sbjct: 251 DTNNPVLNIALEAGFGSISRFYDIFQREFNMTPLQFRN 288 >UniRef50_A8H314 Transcriptional regulator, AraC family n=4 Tax=Shewanella RepID=A8H314_SHEPA Length = 292 Score = 262 bits (671), Expect = 8e-69, Method: Composition-based stats. Identities = 91/278 (32%), Positives = 154/278 (55%) Query: 15 TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHIT 74 SPL++ ++ + + + P +MP SHWHG +E+N FD +YLIN +++ + +G + Sbjct: 12 EASPLAVQAQDTQFGLHRKKPAVMPHSHWHGHIEINYLFDCSADYLINGQEITVPEGRMI 71 Query: 75 LFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE 134 +FWA PHQ+ + + +P+ FL+W L ++ + HG VI S + Sbjct: 72 IFWASFPHQMVASRGDGELVNIYIPLQSFLTWMLPSSFVSQLLHGEVIVSDSLYACDKEL 131 Query: 135 VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVS 194 + W+ ++ + I+EI ++R S+ + + ++ ++ Sbjct: 132 TQIWETDIKRNAPLLTSQVINEIRGRIRRMSIEDYSTFELANRVAKQEDKPVFGGLNHIQ 191 Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 ML +IA+NYDQ +TI +V+ L+ NYAM +F RVM++++KQYI +R+ H +ALL D Sbjct: 192 TMLRYIADNYDQKITIENVSTSTGLHKNYAMKLFNRVMKVSIKQYINQLRLQHAQALLID 251 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 T +L+IAL AGF S SRFY F + GMSP ++R+ Sbjct: 252 TQSPVLNIALEAGFGSVSRFYDIFQREFGMSPLEFRRK 289 >UniRef50_B1ZNN6 Transcriptional regulator, AraC family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZNN6_OPITP Length = 287 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 86/279 (30%), Positives = 132/279 (47%), Gaps = 2/279 (0%) Query: 18 PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFW 77 P + P MP H ++E+N+ G V YL+ KV I GH+T FW Sbjct: 6 PARVDFAPYGFTCVRWQPSRMPRPDHHNELELNLLPGGSVTYLLGGRKVKIEAGHLTTFW 65 Query: 78 ACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVI--KSLATQQLSPFEV 135 A PHQ+ D G + +P+ FL W L + + HG V+ S+A L Sbjct: 66 AAIPHQVLDYGAAPDYFVATIPLVWFLQWNLPPRFVQRILHGEVLADPSIALASLDHSLF 125 Query: 136 RRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ 195 RW +L+ + + + EI L R + + + R ++ V Q Sbjct: 126 TRWVGDLSHASPAVVRFVSLEIEARLLRLANALPDEPSATAPRRRARSVPEAGGLNRVEQ 185 Query: 196 MLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT 255 + FIA Y + L I+D+A L+ NYAM +F+R T+ Y+T RI+H + LL + Sbjct: 186 IACFIARRYREKLRIDDIAAAAGLHPNYAMNLFRRTFGTTLGDYLTHHRISHAQRLLVTS 245 Query: 256 DKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 D+ I+D+AL +GF S SRF F + G SP++YR+ + Sbjct: 246 DEKIIDVALVSGFTSLSRFNEAFRRACGCSPREYRRQHR 284 >UniRef50_B9K1R2 Transcriptional regulator AraC family n=2 Tax=Agrobacterium RepID=B9K1R2_AGRVS Length = 311 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 75/285 (26%), Positives = 127/285 (44%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQG 71 E+ PL ++ + + E M H H Q+E+N +G + Y + ++ I++G Sbjct: 19 ERDPAHPLVVFGDNRFCAGELLDVQKMAGPHMHSQIELNFVLEGSMTYWFDGRELTISEG 78 Query: 72 HITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLS 131 + LFW PHQ+ D +PM +FL + V G VI++L + Sbjct: 79 RLCLFWGMIPHQVIDRREGTRFICLYVPMSVFLGLASLSQFRDSVFRGAVIEALHLRAWD 138 Query: 132 PFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQF 191 RW+ EL +E ++ E+ L R GW + ++ Sbjct: 139 REIFLRWRDELLGGDEGDIEIVRSELTARLMRIERDGWRDLREQGSALASLGQRDAGWML 198 Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 +V +ML FI E+ ++ DV L+ NYAM +F+R + T+ Q I R++ ++L Sbjct: 199 HVEKMLRFIGEHAPDTISAEDVGRAAGLHPNYAMSLFKRAVGTTINQAIIRHRLDTAQSL 258 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 L +D I ++A +GF S S FY F + P QYR+ + + Sbjct: 259 LISSDMPITEVAYESGFGSLSTFYEAFQRRFMEKPVQYRRRMRAK 303 >UniRef50_C6B664 Transcriptional regulator, AraC family n=2 Tax=Rhizobium leguminosarum RepID=C6B664_RHILS Length = 288 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 2/289 (0%) Query: 13 KQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 K T+S + IE M HWH VE+N+ +G + YL N + + G Sbjct: 2 KYTQSRGEWIGSRGQFLIERHIADAMAAPHWHDHVELNLLMEGRMTYLFNGRQEQVEAGR 61 Query: 73 ITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSP 132 + LFWA PHQ + LP+ FL P+D+ + G + + + Sbjct: 62 LVLFWAAIPHQTIAVAENAPLVCLYLPLIDFLGLPVDRKARQSIMQGRFLAQANQETMDA 121 Query: 133 FEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY 192 + RW++E + R+L ++E+ L ++R L E + N + S++ A + Sbjct: 122 LTLPRWEKEWQFGSAARRKLIVEEVRLRIRRLILDNAE--IDNSPTHVSPTSLAGQAVRH 179 Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V ++ I Y +++ D+A+ +++ + A F++V+ +++ +Y+T RI LL Sbjct: 180 VELLIDLINTRYADPISVADLAKLAEMHPSTANSAFRKVLGISVNEYLTRHRIARAMQLL 239 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFP 301 +DT+ +L I GF SSSRFY F + G +P+ +R+ R P Sbjct: 240 TDTEDPVLQIGFDCGFGSSSRFYEIFKERTGTTPRHFREAVNSRNTPAP 288 >UniRef50_A4BGH9 Regulator of melibiose operon n=1 Tax=Reinekea blandensis MED297 RepID=A4BGH9_9GAMM Length = 289 Score = 240 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 101/282 (35%), Positives = 155/282 (54%), Gaps = 1/282 (0%) Query: 14 QTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHI 73 Q P++ + +E R P M +HWH +EVN+P+ VEY IN + + + H+ Sbjct: 8 QPNDPVNPLFVQDNIYVEEREPECMAQAHWHSHIEVNIPYGDGVEYDINGKFFRLPERHL 67 Query: 74 TLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF 133 LFWA PHQLT+ G C+ M I +PM ++W + L + V+ S + Sbjct: 68 GLFWAAIPHQLTNPGKCREMFIAYIPMQTIIAWSQLQRLYRDIVSQAVLHSRVEYPMPID 127 Query: 134 EVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY- 192 ++RR E N ++ ++ + DE+ LMLKR S G E ++ R +Q Sbjct: 128 QMRRLVDEFNRNDDALKAVVNDELQLMLKRASAYGLEQLVEPVIDSDDSVKEKRTSQSQK 187 Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + ML FIA NY Q + + DVAEHV L+ YAM +F+ ++ + MKQYI MR+ + LL Sbjct: 188 IQAMLEFIASNYKQPIAVTDVAEHVHLHPKYAMQMFKNLIGIPMKQYINRMRLMTAKDLL 247 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 DT++SI+DIALT GF S++RFY F +Y +P+++R + Sbjct: 248 RDTERSIMDIALTVGFNSNNRFYIVFRQYEQCTPKEFRNRYR 289 >UniRef50_B6A4E8 Transcriptional regulator, AraC family n=11 Tax=Rhizobiaceae RepID=B6A4E8_RHILW Length = 306 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 130/264 (49%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 +++ P +M HWH QVEVN G V Y +++ + +N G + LFW PHQ+ ++ Sbjct: 28 LQMFHAHPPVMAMPHWHAQVEVNYVIRGSVHYRMSDHEFRLNAGEMCLFWGGQPHQMDES 87 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 A +LP+ F L + + + G + + AT RW + NS N Sbjct: 88 SDDSLYAGAHLPLVYFFRLRLPISISSRLMKGETLLTSATDAADVDNFARWFRYANSGNP 147 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 Q A+DE+ L ++R +L + + H+ V++M FIA N+ Q Sbjct: 148 AKAQHAVDELLLRIERIALEPYSMTTSKTAVSLESDQPHPHSSRSVARMCDFIAANFLQD 207 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 + D+A L+ YAM +F+R +T+ +Y+T +R++ +A+L ++L +A+ +G Sbjct: 208 IDSVDIARAADLHPKYAMNLFKRTTGMTLSKYVTLLRLSRAQAMLMSEGANVLQVAMDSG 267 Query: 268 FRSSSRFYSTFGKYVGMSPQQYRK 291 F S S F +F GMSP +R+ Sbjct: 268 FGSISAFNKSFRHIAGMSPSDFRR 291 >UniRef50_B5JCW6 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCW6_9BACT Length = 290 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 82/286 (28%), Positives = 137/286 (47%), Gaps = 11/286 (3%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQG 71 E+ P L P M H +VE+N+ G V Y++ KVN+ G Sbjct: 7 ERPDFKPYGLTCVNWN-------PSPMGRPDHHNEVELNLMRSGWVSYMLGGAKVNLLAG 59 Query: 72 HITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLS 131 + FWA PHQ+ D G+ + +P FL + L + G +I +L+ Sbjct: 60 DLGAFWASIPHQVIDYGSDTEYFVVTIPFAWFLQFSLPNQFTQTLLKGTLITEPLNGKLT 119 Query: 132 PFEVR--RWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNS--VSR 187 R +W+Q+L + ++ + + + E+ L+R +L + L+ + T + ++ Sbjct: 120 TESERFAQWEQDLANNRDESQDIVLLELQARLQRMALYAKQEKLITTSVDTLSPTSVIAD 179 Query: 188 HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH 247 V Q+ IA+ Y + LT + + V L+ NYAM +F++ T+ YIT RI+H Sbjct: 180 GGLNKVEQIACLIAQRYLEPLTAETIGQAVGLHPNYAMNLFKKTFGTTLVDYITNHRISH 239 Query: 248 VRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 + LL TD+ ILDIA+ +GF + SRF F + G +P++YRK Sbjct: 240 AQRLLVTTDQKILDIAMNSGFNTLSRFNEAFRRCCGFTPREYRKNQ 285 >UniRef50_B9JGQ4 Transcriptional regulator protein n=4 Tax=Rhizobiales RepID=B9JGQ4_AGRRK Length = 312 Score = 234 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 1/265 (0%) Query: 27 RMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD 86 +++ P +M HWH QVE+N G V Y +N+ +V + G I LFW PHQ+ D Sbjct: 25 TLQMFHTHPPLMAKPHWHAQVEINYIMRGTVHYRMNDHEVQLQAGDICLFWGGQPHQMDD 84 Query: 87 TGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPN 146 + A +LP+ F L D+ + G ++ + AT RW + S + Sbjct: 85 SSEDSIYAGAHLPLVHFFRMRLPLDISGRLMRGQILVTSATDAADNENFARWHRYAVSGD 144 Query: 147 EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 A+ E+ L L+R + + +L K V + +++M FIA N+ Sbjct: 145 PAKAGHAVAELLLRLERIAFEPYL-MLPEKREPEMGGQVHPQSSRSLARMCDFIAGNFLH 203 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 + D+A+ L+ YAM +F++ +T+ +Y+ +R++ +A+L ++L +A+ + Sbjct: 204 DIDTVDIAKAADLHPKYAMNLFKKCTGMTLSKYVNLLRLSRAQAMLMRDGANVLQVAMDS 263 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRK 291 GF S S F +F GM+P +R+ Sbjct: 264 GFGSISAFNKSFRHIAGMTPSDFRR 288 >UniRef50_Q7US19 Melibiose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7US19_RHOBA Length = 285 Score = 234 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 77/269 (28%), Positives = 133/269 (49%), Gaps = 10/269 (3%) Query: 26 QRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT 85 E P MP + H ++EVN G + YL+ + I+ G + LFWA PHQ+ Sbjct: 25 YGFTCERWTPVAMPRADRHSEIEVNFLASGSLTYLVGGHRDTIHAGQMGLFWAAVPHQIV 84 Query: 86 DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 + + LP++ F+ +D D++N G V+ S + +RW+ +L S Sbjct: 85 EFDGDDPYFVVTLPLNEFMRSGIDADIVNRTLQGEVLISSVQDERDSASFQRWESDLASQ 144 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 + + + A EI L RF+ + T ++ S Q+ +IA ++ Sbjct: 145 DPALARAAQLEIQARLLRFA----HDKSIGGTGEPMEDLSSA------DQLACYIARHFH 194 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 Q LT +A V L+ NYAM +F++ +++ +IT R++ + LL T++S+LD++L Sbjct: 195 QPLTSEAIANAVDLHPNYAMTLFRKTFGISITSFITQHRLSEAQRLLVTTNRSVLDVSLA 254 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 +GF+S SRF F K G SP+++R + Sbjct: 255 SGFQSLSRFNEVFRKACGCSPRKFRANHR 283 >UniRef50_Q7UU63 Melibiose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7UU63_RHOBA Length = 289 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 3/272 (1%) Query: 26 QRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT 85 E P MP H ++E+N G + YLI ++ ++ +TLFWA PHQ+ Sbjct: 14 YGFTCEVWEPVPMPRPDRHDEIEINFLDSGSLTYLIGGNRITVDAHTLTLFWAAVPHQII 73 Query: 86 DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL---SPFEVRRWQQEL 142 + + +P FL W L + L + G V+ + + F +W ++ Sbjct: 74 EFRDVTHYYVITIPFGWFLQWGLPESLQTQLILGNVLSGKSDPKTAVRDKFLFEQWHSDV 133 Query: 143 NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 + E R+ + E+ L R + S ++ ++ R + S M IA Sbjct: 134 SIDPEDTREFVLLELKARLLRLARSYFKNPALSSDDREARLRNSSPNLAKAELMACHIAR 193 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 N+ L I D+AE V L+ +YA +F++ LT+ IT R+ + LL ++ I+DI Sbjct: 194 NFKSRLQIKDIAECVDLHPDYASTLFRKTFGLTLNGLITRHRVAEAQRLLISSNDQIIDI 253 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 A AGF S SRF F + GM+P+ +RK + Sbjct: 254 AFAAGFDSLSRFNRAFKETTGMTPRGFRKECR 285 >UniRef50_Q2S9E7 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S9E7_HAHCH Length = 284 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 130/264 (49%), Gaps = 4/264 (1%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 +E E P M T+H H +E+ + G VE L + + ++ G + + A HQ Sbjct: 17 LEGERHQPEAMATAHQHCHLEILILTRGKVEMLYGQQTMILSAGELLCYSALHFHQFGAV 76 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 F LP+ + L + + HG ++ + + RW EL + Sbjct: 77 SDDAVAYSFRLPLFALFNLQLSCGVKQQLFHGAPCRARCAGLVDDTMLARWVAELRLRDP 136 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 + L +DEI L+L+R ++ + ++ ML FI +NY + Sbjct: 137 ALDDLILDEITLLLRRL----FKDACFTPPDQQIPGVSGLKVSQHIPVMLQFINDNYHAS 192 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 +++ DVA+HV L+ N+AM +F++ + +++ +Y+TA+R++H R +L T + + IA +G Sbjct: 193 ISVCDVADHVGLHKNFAMTLFKKTLGMSILEYLTALRVHHARRMLQYTGEQVTQIAYASG 252 Query: 268 FRSSSRFYSTFGKYVGMSPQQYRK 291 F S +RFY F KY G SPQ+YRK Sbjct: 253 FSSVTRFYEVFAKYFGESPQKYRK 276 >UniRef50_B6A065 Transcriptional regulator, AraC family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A065_RHILW Length = 287 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 4/264 (1%) Query: 20 SLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWAC 79 + +E M ++HWH +EVN+ +G + YL N ++ + GH+ LFWA Sbjct: 11 EWLGSPRAFTVERHVADTMASAHWHDHIEVNLLLEGSMTYLFNGKQEFVEAGHLVLFWAA 70 Query: 80 TPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ 139 PHQ + LP+ FL+ P+D V G I + T + RW Sbjct: 71 IPHQTIFVTPESPLICIYLPLVDFLALPIDAASRQAVLQGAFISEVETFSSTSAARERWV 130 Query: 140 QELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGF 199 + + RQL DE ++++R L + + + +S Y + Sbjct: 131 DDWLKGDNARRQLVKDETSIVVRRLMLD----HVRKRAAPPPVPKLSGPEVKYAQVLTEL 186 Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 I+ Y + LT+ +A H ++ A F+ V+ +++ +Y+ R+ L++TD I Sbjct: 187 ISRQYSEELTLPSIARHAHVHPTTANRAFRSVLGISVMEYLGRYRLARAMQRLAETDDPI 246 Query: 260 LDIALTAGFRSSSRFYSTFGKYVG 283 L+I GF S++RFY F K G Sbjct: 247 LNIMNDCGFGSTARFYDAFKKTDG 270 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 101/259 (38%), Gaps = 6/259 (2%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P HWH ++E+ G IN N G I L + H T Sbjct: 29 PQYAMPYHWHEELELIHIISGTFHVTINETTRNAVPGDILLVNSGGLHGGTPYDCVYECL 88 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 +F P+ L S + +N + +I + + L + + + Sbjct: 89 VF--PVSLLSSQTYASEFLNRLDRQDLILDEYFPAGDDTAIHSLLERLFALMQDSDEGGK 146 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV-SQMLGFIAENYDQALTINDV 213 + +L +F + + + + K+ +S H Y+ +L +I +Y + +T++++ Sbjct: 147 LQCLGLLYQFMGLLLQD---RRYTASDKSDLSTHRNIYLLKNVLNYIEAHYTEKITLHEL 203 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 A +++ Y F + T Y+ R+ LL+ SI DIA+ GF S Sbjct: 204 ARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIGHSITDIAMLCGFNDVSY 263 Query: 274 FYSTFGKYVGMSPQQYRKL 292 F F KY G+SP QY K+ Sbjct: 264 FTRAFKKYKGISPGQYLKI 282 >UniRef50_Q2CBW0 Regulatory protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CBW0_9RHOB Length = 294 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 120/260 (46%), Gaps = 2/260 (0%) Query: 32 FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ 91 P IMP HWH Q+E+N G ++Y + + +++ G I LFW PH+LTDTG Sbjct: 25 RCEPGIMPAPHWHAQIEINYVERGALQYQMADHALSLPAGEIALFWGGLPHRLTDTGADT 84 Query: 92 SMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQ 151 + +LP+ F L + + G V+ + R + L S N + Sbjct: 85 IYHVIHLPLPHFFRLRLPPGVQRGLMTGAVLAAAGAPAEEEALFGRIRAYLASGNSRRAA 144 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 AIDE+ L L+R +L L + ++ +A + + Sbjct: 145 HAIDELLLRLERIALEPHR--LCGGRLGAAARGAEPGGHPALLRLFEAVAAVFRDEVRAA 202 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D+AE L+ YAM +F+R +++ Y+T +R++ ++ L + S+L+IAL AGF S Sbjct: 203 DIAEAAGLHPKYAMSLFKRATGMSLADYVTLLRLSFAQSRLVADEASVLEIALDAGFGSV 262 Query: 272 SRFYSTFGKYVGMSPQQYRK 291 S F F + G +P YRK Sbjct: 263 SAFNKAFRRQTGTTPTAYRK 282 >UniRef50_B3C996 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C996_9BACE Length = 282 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 17/295 (5%) Query: 2 NTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLI 61 +++ +++ P L E R P +MP H ++E+N +G + Y Sbjct: 3 DSEKLKTFDEKRDEFKPYGLTCEIWR-------PQLMPKIDRHNEIELNYIPEGGITYFF 55 Query: 62 NNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMV 121 KV + ITLFW PH++ + + + +P +LFL W L ++N + G V Sbjct: 56 PTGKVTVPPRKITLFWGLIPHKIIKSESDAPYFVVTIPFNLFLGWRLPSTIVNRILGGEV 115 Query: 122 IKSLAT--QQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSR 179 + +L RW ++ S Q + EI + R + + ++ + Sbjct: 116 VVETVESECRLDKPMFERWVSDMASKQNQ--EAVSLEIQARILRLTKN------MSVSEA 167 Query: 180 THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 ++ + +++ +IA N+++ + I+D+ V L+ +YA IF++ T+ +Y Sbjct: 168 KPTAILNPADASILERIVVYIAHNHNRPIKISDIGRAVGLHPDYANAIFKKAFGCTLSRY 227 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 + RI V+ L TD SI IA GF S SRF +TF G +P+ YR+ ++ Sbjct: 228 VAEERIGQVKRKLILTDMSITQIAFECGFNSISRFNNTFFNICGQTPRCYREQNK 282 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 119/290 (41%), Gaps = 14/290 (4%) Query: 19 LSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWA 78 LY+ + + P HWH + E+ G V Y + V +++G + Sbjct: 26 YGLYTAGYQRVFQADIPW-----HWHDEFELGYISGGSVVYQTSGLTVTLHEGDGIFINS 80 Query: 79 CTPHQLTDTGTCQSMAI-FNLPMHLFL----SWPLDKDLINHVTHGMVIKSLATQQLSPF 133 H L C+ + FL LD + V ++++ + P Sbjct: 81 GVLHYLHPLEPCREARLQTQFFDKSFLAGSLGSLLDIKYVAPVLDQRQLEAVPLYRSDPE 140 Query: 134 EVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHA--QF 191 E ++ + L L+ WE I + R + Sbjct: 141 SKGFL--ECLQKGVELCSRKEEFFELRLRNLFSELWESIYRWAAQKESSTPSLRRSIEDD 198 Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 + QM+ ++ ++ + ++++ +A + ++ +FQ M +T +Y+ ++R+ + ++L Sbjct: 199 RIKQMMRYVQAHFSEKISVSSIAASIPISERECYRLFQNSMGITPIEYLISVRLQNAQSL 258 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFP 301 L +T+KSILDIAL GF SSS F F + ++P QYR LS+Q+ P Sbjct: 259 LMNTNKSILDIALETGFGSSSYFGKIFRSHHRLTPAQYRNLSRQKALAAP 308 >UniRef50_C7MHG0 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MHG0_BRAFD Length = 300 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 25/299 (8%) Query: 18 PLSLYSEYQR--MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITL 75 PLS E + I AP M + H H VE+N+ DG + YL + + I +G I + Sbjct: 5 PLSDAVEDMPPGLWIRRGAPPPMFSMHRHDDVEINLVLDGQLHYLFGGQPLTIREGEIAV 64 Query: 76 FWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQ--QLSPF 133 FWA PH L D+ T M ++P +FL+W L + + + + A + Sbjct: 65 FWAAQPHGLVDSRTGD-MCWLHVPFSMFLAWGLPEAQTAPLLSAQPLITHAPDLARRIAH 123 Query: 134 EVRRWQQEL------------------NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVN 175 RW +E+ + +++ ++A+ EI ++R + Sbjct: 124 MAERWGEEVGGAEPGGGTGAAGGADGSSRGDDESTEIALLEIQAAMRRVLRASSRAN--P 181 Query: 176 KTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLT 235 + SV VS M ++ +++ +T+ D+A V L ++AM +F+R +T Sbjct: 182 EAPSDGGGSVPAARLRQVSTMAQYVRDHHRSPVTVADIAASVHLAPSHAMTVFRRTAGVT 241 Query: 236 MKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 + Y+T R+ + LL T + +IA AGF S S FY GM+P++YR+ + Sbjct: 242 LGDYVTMCRVAEAQRLLLTTSLKVTEIAEEAGFGSLSSFYEHVSAACGMTPREYRRQRR 300 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 25/285 (8%) Query: 25 YQRMEIEFRAPHI-MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ 83 Y ME + R + M H H E+ G+ Y I + + G + H+ Sbjct: 15 YLSMEYDRRIGYFSMSADHLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHK 74 Query: 84 LTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELN 143 D+G P H L ++ +L + V LA PF L Sbjct: 75 TLDSGR---------PDHDRLVLYINPELFADL---AVPPELAEGLKEPFGWDVPILRLP 122 Query: 144 SP-NEQIRQLAIDEIGLMLKRFSLSGW-------EPILVNKTSRTHKNSVSRHAQFYV-- 193 SP +E + ++ D + M+ + S W E +L SR S + + Sbjct: 123 SPASEAVERMVGDMVNEMIHPQAGSSWLLRHRTVELLLFAYRSRHLGMVRSADTEPVLHP 182 Query: 194 --SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 ++ ++ +NY QALT+ +VAE +++ +Y +F++ T Y+ +R+ + L Sbjct: 183 KTQAVVRYLNDNYRQALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRL 242 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 L ++D SI DIA +GF + S F F + V +SP+ YR+ + R Sbjct: 243 LRESDDSITDIAWRSGFSNFSHFGKMFKRTVQLSPRAYRQQYRMR 287 >UniRef50_B3CFU1 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B3CFU1_9BACE Length = 280 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 19/294 (6%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 MN++ ++ P L E P +MP H ++E+N G++ YL Sbjct: 1 MNSEKCYSFDKFREEFKPYGLTCEAW-------VPRVMPRYDRHNEIEINYLPQGNITYL 53 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 +NEK+ I T+FW PHQ+ + + +P FLSW L ++ + G Sbjct: 54 RHNEKITIPNKRFTIFWGLIPHQIIHYENVEKYYVCTIPFAHFLSWKLPAQFVDSLLRGD 113 Query: 121 VI--KSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTS 178 ++ ++ Q F + W ++ S L + E+ + R + + S Sbjct: 114 ILYEQTDEYSQYDEFLLNNWLKD--SGVNTQSGLVLLEMQTRITRMAH--------HLQS 163 Query: 179 RTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQ 238 +++ + + ++ ++ +NY + ND+ + V L+ +YA IF++ T++ Sbjct: 164 SDDSMALASYQTTLIEKITIYLTKNYCNDIKANDLGDAVGLHPDYANHIFKKAFGTTIRD 223 Query: 239 YITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 YI +RI H + L TD SI DIA GF S +RF +TF K + +P++Y+K Sbjct: 224 YIAELRIAHAQRKLLTTDMSITDIAYECGFNSIARFNATFFKKIQCTPREYKKK 277 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 107/284 (37%), Gaps = 6/284 (2%) Query: 9 SSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNI 68 +E + R E+ I+ P + + HWH + E+ +G + ++ + Sbjct: 5 DHNEDRPRGTYEFPFEFHH--IDHTHPRYVMSYHWHVEYEIIRILEGSLTVTLDEKSFTA 62 Query: 69 NQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQ 128 + + + H +F++ L + P+ + I + H + Sbjct: 63 VKNDVIFVHSGILHSGIPHDCVYQCIVFDMNTFLK-NNPVCGEYIQKILHQETMLFPHFS 121 Query: 129 QLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 P + ++ E+ + G F L + +RT ++ Sbjct: 122 DEHPQILNCISVLFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRD---YK 178 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 + Q+L FI +NY +T+ +++ V ++ Y F + T Y+ RI Sbjct: 179 RILQLKQVLEFIEKNYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEA 238 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 L+ TD SI +IA GF S F TF KY GM+P +Y++ Sbjct: 239 CLQLAATDDSITEIAYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_C0A1S6 Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A1S6_9BACT Length = 308 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 15/278 (5%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 M + H ++E+N G + + E V++N G +WA PHQ+ + Sbjct: 29 EAMAAADQHNEIELNFIERGAMVFRRGVETVSVNAGEGVAYWAAVPHQVLAVEADTVITW 88 Query: 96 FNLPMHLFLSWPLDKDLINHVTHGMVI-KSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 ++P+ FL W L + G ++ + F + W ++ S E+++ + Sbjct: 89 VSVPLSWFLGWELPAVFTRRLLEGGLLGMPAELTGGTVFSLAGWGRDFASEAEELKVVVR 148 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSV--------------SRHAQFYVSQMLGFI 200 E+ +R++L + V + + + + +V +M+ +I Sbjct: 149 LELEAFFRRWALGATKASGVELAAAVAGEAALGTGLRLSGVLSGGNGYQCRHVERMVRYI 208 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 E++ +T+ VA KLN YAM +FQ+ +T+ +++ R++ R LL +D ++ Sbjct: 209 NEHFRDEITVAMVAGAAKLNPEYAMRLFQKRWGMTLWKFLLRQRVSEARRLLLLSDTPLI 268 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 +IAL GF+S SRFY F G SP YRK + Q Sbjct: 269 EIALGCGFQSLSRFYEAFKAECGCSPGAYRKRHAKPSQ 306 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 111/263 (42%), Gaps = 11/263 (4%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT-----CQS 92 M H+H E+ G+ Y I ++ I G + L H+ + +G + Sbjct: 27 MDGEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQPHERI 86 Query: 93 MAIFNLPMHLFLSWPLDKDLINHVTHGMVIK-SLATQQLSPFEVRRWQQELNSPNEQIRQ 151 + F + L +++L V++ S QQL + R E ++ + Sbjct: 87 LVNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLAE-----QKQQA 141 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 +E +L L + + + + + ++++ +I +YD+ L+++ Sbjct: 142 GGYEEYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLS 201 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D+A L+ Y +F RV LT+ YI +RI ALL +T+ + +IA G++S Sbjct: 202 DLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSG 261 Query: 272 SRFYSTFGKYVGMSPQQYRKLSQ 294 + F F K +SPQ YR+ + Sbjct: 262 THFGRVFKKAKAVSPQSYRREQR 284 >UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2G6_9CLOT Length = 299 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 129/300 (43%), Gaps = 15/300 (5%) Query: 1 MNTDTFMCSSDEKQTRSPLS----LYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGD 56 M + K+ R PL + +E+Q++ + + SHWH ++E+ V +G Sbjct: 1 MEKKKIQTDKEGKELRQPLDGKFPIAAEFQKLSY---YAYGLCISHWHPEMELLVVTEGA 57 Query: 57 VEYLINNEKVNINQGHITLFWACTPH--QLTDTGTCQSMAIFNLPMHLFLS--WPLDKDL 112 +E I E I + + H ++ + C I P L + + + Sbjct: 58 LEQRIGEETHMIRENEGVFINSHVMHGARMVNREDCSYRVIRFEPALLGGNAKSLIYEKY 117 Query: 113 INHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPI 172 + + + + + R + +++ E+ +++ L WE + Sbjct: 118 VKTLQSQKDLLYRIVRPEDIQQRRMIDLIYKITDTYVKREVCYELK--VQQMMLELWE-L 174 Query: 173 LVNKTSRTHKNSVSRHAQFY-VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 L +T +N++ + + Y + L +I Y +T+ D+A L+ + +F++V Sbjct: 175 LYKRTGHVEENAIQMNRELYKIQDALAYIQMYYKNPMTLEDIAGACMLSKSSCCRLFKKV 234 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + + +Y+T+ RI L++D SI +IA +GF +SS F F K +GM+P QY+K Sbjct: 235 FRQSPMEYVTSYRIQQSFMLIADDRYSITEIAYESGFTNSSYFTEMFRKVIGMTPTQYKK 294 >UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUK1_9CLOT Length = 334 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 112/256 (43%), Gaps = 9/256 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH--QLTDTGTCQSMAIFNLP 99 HWH ++E+ + +G + Y IN++ G + T H ++ + C+ ++I P Sbjct: 75 HWHTEIELTLITEGTMVYQINDQIFYPRAGQALFGNSNTMHTGRMENGRDCRYISITFHP 134 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI---RQLAIDE 156 L + I ++++ A + + W E E I L D Sbjct: 135 ---RLLYGYQGSRIASRYTDPLMENAALPAVCFDLSQEWHGEAVGLLEDIIRIDSLRYDT 191 Query: 157 IGLMLKRFSLSGWEPILVN-KTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 + ++ W+ + ++ + R ++ R Q + QML FI ENY +T++D++ Sbjct: 192 YEMDIQMDLFRFWKLLYLHCRPDREPAHTAGRKNQERIRQMLSFIHENYQSDITLDDISR 251 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 H+ + + +F+ M+ ++ +Y+ RI + + ++ + A+ AGF + F Sbjct: 252 HIHICKSECCRVFKGYMKESLFEYLLKYRIEKSIPDVLEGKLTMTETAIRAGFTDPNYFS 311 Query: 276 STFGKYVGMSPQQYRK 291 F K G SP+ YRK Sbjct: 312 KVFHKIKGCSPRSYRK 327 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 103/254 (40%), Gaps = 7/254 (2%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG--TCQSMAIFNLP 99 HWH + E G + Y I +++ + G + H C++ + P Sbjct: 38 HWHSEFEFVYILSGAILYSIEDKEYCVKAGEGLFIHSNQLHAARSFNGMPCEACVVLFHP 97 Query: 100 MHLFLSWPLD--KDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 + I + G ++ + E +R +L S + ++ + E Sbjct: 98 NLFGHNKQSSTYSKFIYPILEGDLVFENYFK--CEEEWQRLVMKLLSELDDLKYENVSEN 155 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ-FYVSQMLGFIAENYDQALTINDVAEH 216 L+LK W N + + +R+ + + +L +I ENY + +T+ +A+ Sbjct: 156 ELLLKSKIFEIWHLCYKNSVALAPQGRKNRNYKLERMQPVLNYIHENYKEEITLMALAKI 215 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 + ++ F+ VM ++ Y+ RI LL++TD I DIA GF + S F Sbjct: 216 LPMSEGQFCHAFKEVMNISPIAYVIRHRILQSCTLLTETDWKIADIARNVGFNNISYFNR 275 Query: 277 TFGKYVGMSPQQYR 290 F K +G SP +YR Sbjct: 276 EFIKAIGCSPSKYR 289 >UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIS8_9CLOT Length = 285 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 10/270 (3%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 I A MP H H + E+ +G Y I+ ++ G + HQ + G Sbjct: 18 IRREAAFTMPCKHLHNEYEIYYLLEGQRYYFIDRRTYHVTGGSLVFIDRNQIHQTSQAGP 77 Query: 90 CQSMAIF----NLPMHLFLSWPLDKDLINHV--THGMVIKSLATQQLSPFEVRRWQQELN 143 I P FL++ + L G++ Q L+ + + +EL+ Sbjct: 78 GSHERILISLDQNPFSDFLAFTGEMSLEGFFRRNSGILNLDKEGQNLAEYLLDGAAKELH 137 Query: 144 SPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAEN 203 R + + ++ + P ++ R V ++ +I ++ Sbjct: 138 EKKPGFRHITMSKLSQLFILAQRHMSGPSSLSADLPLSTQPKHRK----VDEVASYIIDH 193 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 YD+AL++ +A H +N Y IF+ T+ +YI +RI R LLS+T SI +++ Sbjct: 194 YDKALSLEIIAAHFYVNKCYLSRIFKEASGFTVNEYINMIRIRRARELLSNTSMSITEVS 253 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 + G+ + + F F +Y SP YRK Sbjct: 254 ESVGYETITYFERVFHQYTQTSPSGYRKQY 283 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 123/301 (40%), Gaps = 17/301 (5%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M+ + P+SLY + AP + HWH ++E+ + +G + Sbjct: 1 MDKSLLKEARKHGNPIYPVSLY----EITCPSDAP--LLDLHWHDELELLLVTEGTAVFR 54 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 ++ + + G + H G + +F S I+++ Sbjct: 55 VDLQDYELQAGEAIFVNSGELHSGYVVGGKP----CSFDAVVFHSSLFSSGSIDYLFDRY 110 Query: 121 VIKSLATQQLSPFEVRRWQQ---ELNSPNEQIRQLAIDE---IGLMLKRFSLSGWEPIL- 173 + L + P +RR EL + +QI ++ +E L +K S ++ Sbjct: 111 ISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVS 170 Query: 174 VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQ 233 + K S K + + ++ +I +NY + + + +AE +++ +Y F+R+ Sbjct: 171 LGKPSVRVKPEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITT 230 Query: 234 LTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 + +Y+ + R+ + L TD I+++AL GF S S F + F + G +P++YR Sbjct: 231 KSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRL 290 Query: 294 Q 294 Q Sbjct: 291 Q 291 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 66/301 (21%), Positives = 122/301 (40%), Gaps = 17/301 (5%) Query: 1 MNTDTFMCSSDEKQTRSPLSLY---SEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDV 57 MN F+ + K+ + + Y + R+ HI HWH + + +G+ Sbjct: 1 MNNYHFLIDYNLKELTEHSTTTWSIALYHTKICDHRSGHI--PLHWHDEFQFVFILEGEA 58 Query: 58 EYLINNEKVNINQGHITLFWACTPHQLTDT-GTCQSMAIFNLPMHLFLSWPLDKDLINHV 116 E+ IN E + + +G H D GT + N+ H + L ++ Sbjct: 59 EFHINEETICLKEGDGVFINCGCLHMAKDANGTTCTYLCLNVSPHFITANELFTTFVHPY 118 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE----IGLMLKRFSLSGWEPI 172 H + + W + + I++L IDE L L ++ W+ + Sbjct: 119 MHASQTPYILLNRKD-----HWPNHIYQCIQTIQRL-IDETPAYYELELNIQLITMWKCL 172 Query: 173 LVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVM 232 L N + ++ + ML +I ++Y + + + D+A +L+ + F+ ++ Sbjct: 173 LQNGFQIKY-DARQHDKNERMKPMLNWIHQHYHEKVLLQDIARAGQLSRSECCRYFKDIL 231 Query: 233 QLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 + T Y+ R+ LL +TD +I +IA GF S+S F S F + +P YRKL Sbjct: 232 KKTPLHYVNEYRVQQSLILLQETDFNITEIAYKVGFNSTSYFISMFKRIKNTTPLAYRKL 291 Query: 293 S 293 Sbjct: 292 K 292 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 118/257 (45%), Gaps = 5/257 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++EV G + ++N +N+G + H + GT + + +L + Sbjct: 45 HWHEEIEVIRVKSGSIHLYLDNSDFVLNEGDGVFINSNILHYIR-AGTSEECILNSLVFN 103 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQ-IRQLAIDEIG-- 158 L + + ++++ ++ ++ W +E ++ + Q E G Sbjct: 104 KNLISGGVQSVFEQNFVNPIVENKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEFGYE 163 Query: 159 LMLKRFSLSGWEPILVN-KTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 ++++ + W +L N + +KN+ + + +L F+ +NY++ +T+ND+A+ V Sbjct: 164 ILVREYLSHIWYIMLKNIQDLNLNKNNRNDLNSERIKNILSFVHKNYNKQITLNDIAKVV 223 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 L+ + F+ + ++ QYI R++ +L + I I+ GF S S F Sbjct: 224 NLSERECLRCFKNTLGISPIQYILKYRVSIATKMLRENKDPITIISDAVGFDSPSYFSKI 283 Query: 278 FGKYVGMSPQQYRKLSQ 294 F +++G++P QYR S+ Sbjct: 284 FKRFIGITPTQYRNKSK 300 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 8/259 (3%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P HWH + E+ G+ +N ++ + G + A H T Sbjct: 29 PRYNMPYHWHTEYEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGILHGGTPIDCVYECI 88 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 +F++ L ++ K + + + + VI SL P + Q N E + Q + Sbjct: 89 VFDMKSLLKVNSTCSKQIQDIIHNSKVINSLL-----PTDNLELQTVCNYLFESMAQKKL 143 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY--VSQMLGFIAENYDQALTIND 212 L+ + IL ++ T K + S++ Q +L I + Y LT+ D Sbjct: 144 G-YELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQQYPDPLTLED 202 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 +++ + Y F+ + Q + Y+ RI L T++SI +IAL GF S Sbjct: 203 LSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEIALNCGFNDIS 262 Query: 273 RFYSTFGKYVGMSPQQYRK 291 F TF KY G++P+QY K Sbjct: 263 YFIKTFKKYKGVTPKQYLK 281 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 97/253 (38%), Gaps = 8/253 (3%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH + E+ G + ++ ++ + + H + AI Sbjct: 36 PHWHDEFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGKAEDNPEPYAIVFSLS 95 Query: 101 HLFLSWP--LDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 LF P + V+ ++ + + E+ + + +L + Sbjct: 96 MLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHTRELISNIITVWKEKPKGYELLVKGY- 154 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 L + + L + + T R + + + L FI NY + I+ +A+ Sbjct: 155 LFVIFYYLFNKRYVTASSTDRELDLKLEK-----IKSALDFINSNYSSDIDIDLLAKLAN 209 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 L+ Y +F+ + LT YI R+ L+ +T+ SI +IA GF + S F F Sbjct: 210 LSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFIKVF 269 Query: 279 GKYVGMSPQQYRK 291 +YVG++P +Y+K Sbjct: 270 KEYVGVTPFKYKK 282 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 7/257 (2%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTC-QSMAIFNLPM 100 HWH +VE+ V G +N +N G + + H ++ Sbjct: 39 HWHNEVELIVIKKGQGLVNVNLVTYTVNAGDVVFVFPGQLHSISQKDYSIMEYENILFKS 98 Query: 101 HLFLSWPLD---KDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 L S D I + G + ++ S F+ L + +++ Sbjct: 99 SLLKSSGYDLCNDKFIQPLLSGNL--NIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAY 156 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 L +K + + +L++ +S+ A + +L ++AE++ ++I ++A H Sbjct: 157 QLAVKSYLFQIF-YLLISNCGLNQIKPISKKALEKIKTILSYVAEHFQDNISIEEIAGHC 215 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 + +Y M F+ M ++ QY+ R+ LL+ T I++IA+ GF + S F Sbjct: 216 FYSKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRC 275 Query: 278 FGKYVGMSPQQYRKLSQ 294 F K G++P +YRK ++ Sbjct: 276 FKKKYGITPGKYRKDAR 292 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 12/268 (4%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA- 94 + HWH ++E+ G IN EK I + L + H + + MA Sbjct: 37 PFLAKHHWHEELEIIYFEQGCFHLEINMEKYEIEEECFCLIKSGDLHYIYSEKDYREMAF 96 Query: 95 IFNLPMH-LFLSWPLDKDLINHVTHGMV-IKSLATQQLSPFEVRRWQQE-------LNSP 145 +F+L M F + P+ + L+ + G + + L +Q F + + + L S Sbjct: 97 VFSLSMLRAFAADPVQEKLVQPLAEGSLSLPGLIYRQNPCFVILKREFLQIADAAGLPSG 156 Query: 146 NEQIRQLAI--DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAEN 203 +R M + SL + + V + L ++ E+ Sbjct: 157 ASNLRSQYRVSSLPQYMRAKASLLNIFAAFSEQNLLAVSQMPADRRVDTVKKTLSYMQEH 216 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 + +T+ ++A +N Y F++++ Y+ MRI + LL +TD S+ +IA Sbjct: 217 MTEKVTMQELAAQANMNEQYFCRFFKKIIGRPPITYLNEMRIRYACRLLKETDHSVTEIA 276 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 L +GF + F TF G +P QYRK Sbjct: 277 LESGFNNLGNFMRTFRLVCGCTPLQYRK 304 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 112/259 (43%), Gaps = 11/259 (4%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQS-MAIFNLPM 100 HWH + + + G++ + IN++ + +G H + +S N+ Sbjct: 48 HWHDEYQFSYVTQGEIYFYINDQTFILKEGQGIFINTGCMHSIKAVNDPESTYVCINIDK 107 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 LF V + +L + W E + + I Q +D+ Sbjct: 108 KLF------SSFKGSVIEQKYLNTLTQSAIFLDLSEEWHIECINKLKDIYQFYVDKSFSF 161 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSV----SRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 ++ + + + + + + S+ + ++L F+ ++Y + +T+ +A+H Sbjct: 162 EIDICINLMQTLALVVKNALNPILLTTIESKDEYQKIKKILSFLHQHYAEKITLEQIAQH 221 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 + LN N +F+R ++T+ +Y+ R+N LL +DKSI IA+ GF + S + Sbjct: 222 IFLNKNECCRLFKRKTKMTIFEYLLEHRLNKSIELLIHSDKSISQIAIDTGFSTVSYYID 281 Query: 277 TFGKYVGMSPQQYRKLSQQ 295 TF K VG++P +YRK + Sbjct: 282 TFHKNVGITPNEYRKRELK 300 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 111/265 (41%), Gaps = 7/265 (2%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P +HWH + E+ G I+ + G I + H Sbjct: 29 PRYHMITHWHKEYEIIRILSGTFNIKIDAVSYTVKTGDILFLNSGAIHSGIPVDCTYECL 88 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSP-FEVRRWQQELNSPNEQIRQLA 153 +F++ L + ++ +L + + I+ L ++L +++ E+ + QL Sbjct: 89 VFDISSLLQQNSLVNTELNALIHYKKKIQLLFDKKLGAVYDILNQMFEIMKDKKNGYQLR 148 Query: 154 IDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDV 213 I G + L + + + +++++ + + ++L FI Y + +++ D+ Sbjct: 149 I--YGNLYYFLGLVEEKNLYI---KEKEFSAINKKSLSRIKKVLFFIETKYMENISLEDM 203 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 A+ +K+N Y F+ + + T +Y+ RI + D SI D+A GF +S Sbjct: 204 AKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKFFDSSITDVAYDCGFNDTSY 263 Query: 274 FYSTFGKY-VGMSPQQYRKLSQQRR 297 F F KY GM+P++Y KL ++ Sbjct: 264 FTKVFKKYNSGMTPREYSKLYLKKE 288 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 63/267 (23%), Positives = 116/267 (43%), Gaps = 17/267 (6%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 + M ++H+H Q E+ G+ Y I + ++ G + L H+ TD T + + Sbjct: 26 YTMLSNHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDVHRTTDADTQDHVRV 85 Query: 96 F-NLPMHLFLSWPLDKDLIN--HVTHGMVIKSL-ATQQLSPFEVRRWQQELNSPNEQIR- 150 N LS P L++ + + VI L A QQ + + E+ + + Sbjct: 86 LLNFSKDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVLLDKMIHEIEHQSTGFQV 145 Query: 151 --QLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQAL 208 Q + ++ + R+ S +L + K +SQ++ +I NY L Sbjct: 146 ALQALLMDLLVYTSRYIESNRHDVLAPPSQVHEK----------ISQIVQYINTNYQTPL 195 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 T++ VA++ ++ Y F++ T +YI +RI + LL +T+ ++DI+ GF Sbjct: 196 TLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVGF 255 Query: 269 RSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 S S F F + SP YR+L+ + Sbjct: 256 GSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 6/267 (2%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 +F + SHWH + E+ +G+V + I++E + + G H G Sbjct: 27 YQFAPGAHVVDSHWHKEAEIFYVMEGEVLFQIDSEYIPVRAGEAIFIDGGDLHTGHAQGN 86 Query: 90 --CQSMA-IFNLPMHLFLSWPL-DKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 C A +F++ M S+ L + +I + + +E+ Sbjct: 87 EGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQERRAAFPRRMTSGTDERLLEHIKEMMLL 146 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 ++ I L + SR+ ++R + +++ +I +Y Sbjct: 147 SKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSRSEAADMTRT--ERLKKVILYIQSHYH 204 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + + ++++A+ + ++ F+ + T Y+ + R+ LL D I DIAL Sbjct: 205 RPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQAAELLRSPDNKISDIALD 264 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKL 292 GF S F F K + +P +YRK Sbjct: 265 VGFGHISYFVRVFRKIMNCTPSEYRKK 291 >UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBD9_CLOBU Length = 302 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 66/306 (21%), Positives = 125/306 (40%), Gaps = 18/306 (5%) Query: 1 MNTDTFMCSSDEKQTRS------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFD 54 M + ++ +T S P+ +Y + + HWH ++E + Sbjct: 1 MEVNKVTVDANLLETTSHGNREFPMDVYRDDFSKYY-----TNIINWHWHPEIEFVMITK 55 Query: 55 GDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLIN 114 G +EY E + + +G + T H Q +F++ + L + + +I Sbjct: 56 GKIEYSTEEETLILREGDGIFINSNTLHMAKSIDGYQDSLMFSVVVSPKLIYNDTESIIY 115 Query: 115 HVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE---IGLMLKRFSLSGWEP 171 +++ L + WQ+++ S I L +E ++K W+ Sbjct: 116 KKYVKPIVECSKLSYLKLDKYNTWQKQILSHLLYIDALKFNEEHGFEFIIKNQISLIWQL 175 Query: 172 ILVNKTSRTHKNS----VSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGI 227 I +N + N+ +Q + QML FI +NY +TI+D+A+ ++ + Sbjct: 176 IALNTSHLYLHNNCLINSHSLSQERLKQMLRFIHKNYFNNITIDDIAKSANISRSECFRC 235 Query: 228 FQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQ 287 F++++ Y+T R+ LL +TD + DI + GF SS + F + G+SP Sbjct: 236 FKKMINTKPFSYLTDFRLEKSLQLLLETDIPVSDICYSCGFNHSSYYGKLFREKFGISPS 295 Query: 288 QYRKLS 293 YRK S Sbjct: 296 SYRKSS 301 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 62/286 (21%), Positives = 110/286 (38%), Gaps = 17/286 (5%) Query: 12 EKQTRSPLS---LYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNI 68 +K+ P+ Y E+++ E++F H H E G + + + Sbjct: 9 QKEPYYPVVKFYYYKEWRQFEMKF---------HSHEAAECMHVLSGSCKVETDEGSYQL 59 Query: 69 NQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQ 128 +G I A T H+L + C+ +FN+ + ++ + Sbjct: 60 KKGQIIFLDAGTRHRLIVSERCR---MFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNK 116 Query: 129 QLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 Q S + I L +D+ L+ Sbjct: 117 QASQLLLHDTDDTYQCLRRLI--LEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPD 174 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 Q YV + L +I +NYD+ +++ D+A V L+ Y +F+ ++ +++ + RIN Sbjct: 175 QQAYVKRALAYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKA 234 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 +A+L TD SI DI G S F +TF K+V +P +YRK Q Sbjct: 235 KAMLKQTDISITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280 >UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYV7_CLOB8 Length = 303 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 121/283 (42%), Gaps = 10/283 (3%) Query: 18 PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFW 77 PL++Y++ + F +I HWH +V+ + V I +E++ ++ G + Sbjct: 27 PLAIYTDKFNL---FEDGYI--RWHWHKEVQFSYSLYDKVVVFIEDEEIILSPGEGIMIN 81 Query: 78 ACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRR 137 + HQ+ +F++ L ++ LI +I+S + +S Sbjct: 82 SNVLHQIKPYKNID-CMMFSIDFDSTLIGGSEESLIEKKYLSPIIESNNLKFISLKPDVP 140 Query: 138 WQQELNSPNEQIRQLAIDE---IGLMLKRFSLSGWEPILVN-KTSRTHKNSVSRHAQFYV 193 WQ+ + S EQ+ L+ ++ L +K + W ++ K + + V Sbjct: 141 WQKRILSHLEQVFILSHEKSYGYELEMKNYLSIVWLNLIKEIKEDIKISMPSASNDDERV 200 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 + +I ++Y + ++ +A ++ + F+R++++T +Y+ R++ LL Sbjct: 201 KMAMQYIQKHYADNIDLDSIARAANISKSECCRSFKRILKVTPFEYLMEYRVSKAAELLL 260 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 SI +I+L GF S F F KY SP +YR +R Sbjct: 261 KNKDSISNISLDVGFNGISYFGKVFKKYRNCSPSEYRTKYCRR 303 >UniRef50_Q2S9F0 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S9F0_HAHCH Length = 287 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 4/266 (1%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 + F P IM SH H +E+N+ G + ++ + G + F A HQ+ Sbjct: 22 VSFHFGEPEIMEGSHQHCHLEINILLSGALRLSYLDQLYELESGDVICFSALHRHQVVSA 81 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 LP+ L ++ + + G +S AT LS V RW QEL + Sbjct: 82 DESAVALQLRLPLFLLTDMCANEMFKHLLIRGTPYRSNATGLLSLDTVERWAQELRCMDG 141 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 ++ L +DEI L L+R + +++ HA M+ FI NY Sbjct: 142 PLQDLVLDEITLFLRRMIMRNPCKSGQGAGCGEYRSRHLHHA----HCMVDFINGNYRTP 197 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 +TI DVA+ V L+ N+AM +F++ + +++ +Y+T +R+NH R LL + +++IA +G Sbjct: 198 ITIADVADGVGLHKNFAMSVFKKAVGMSVLEYLTDLRVNHARRLLLYSQDQVIEIAFASG 257 Query: 268 FRSSSRFYSTFGKYVGMSPQQYRKLS 293 F S +RFY F KY SP +YRK Sbjct: 258 FSSVTRFYEVFAKYFNESPLKYRKQH 283 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 5/254 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++++++ G VE+++ + + G H G + + + Sbjct: 43 HWHDEIQISIVTKGSVEFIVGEKSYILKNGQAIFINTQRIHMAKSVGD-EDCIYHAIMFN 101 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE-LNSPNEQIRQLAIDEIGLM 160 L +I VI S + + W+Q+ L ++ I I + G Sbjct: 102 AKLLKMFPGSIIEQKYIDPVITSNKLNSIEIYGNNNWEQDALKYISDIINVDIIQDKGYE 161 Query: 161 LKRFSLSGWEPILVNKTSR---THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 LK + +L+ + K + + +L FI +NY +T+ D+A+ V Sbjct: 162 LKIYIDLLNFWLLLVLNDKDIFNQKMEPKPINEQRIKDVLSFIHQNYSNKITLQDIADAV 221 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 ++ F++ ++++ Y+ RIN LL ++ SILDI+ GF + S + Sbjct: 222 FVSKGECCRFFKKSLKMSPYDYLINYRINESMKLLKNSSLSILDISENVGFNNVSHYIQI 281 Query: 278 FGKYVGMSPQQYRK 291 F K G +P +YR Sbjct: 282 FKKKTGQTPLEYRN 295 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 101/260 (38%), Gaps = 6/260 (2%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQS-M 93 P HWH + E+ G E ++ I+ G +L + H T C+ Sbjct: 29 PRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDAGCCSLIIGGSMHGGTPKDNCRYDC 88 Query: 94 AIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLA 153 +F++ L S L + H + + P + + + E + Sbjct: 89 LVFDMAALLKSSQICTLHLQPIINHERRFITFFSADSEPAKDAKAVIDAMLEKEPGYEFT 148 Query: 154 IDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDV 213 + L + ++ E +T+ + V R ++ +I +NY + +T+ ++ Sbjct: 149 VPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKN-----VISYIEQNYRKNITLEEL 203 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 A +N NY F+ T +Y+ RI L++ TD+ ++DIA+ GF S Sbjct: 204 ANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAMKCGFNDYSY 263 Query: 274 FYSTFGKYVGMSPQQYRKLS 293 F F G++P+ Y + S Sbjct: 264 FIKVFKSMKGVTPRDYCRRS 283 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 110/253 (43%), Gaps = 4/253 (1%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH + E+ G ++ ++ + +N+G + + H + + + + Sbjct: 38 PHWHNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVNSGSIHSGLEM--IKRSIGYAIVF 95 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 L L + + D H +I S + ++ E ++ + L Sbjct: 96 DLRLLYSEEPDYCKHEYFLPLINKRYHIP-SNLNDEHIRNDICRIIEVFKEKSYG-YELY 153 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 +K + + R +++ + + +L +I +NY++ L++++++ V ++ Sbjct: 154 IKSLLFDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVDMS 213 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 Y +F+ ++++ +YI +R++ LL +TD S+ +IA GF + S F F K Sbjct: 214 KFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKK 273 Query: 281 YVGMSPQQYRKLS 293 Y+ +P ++RK + Sbjct: 274 YMHTTPLKFRKQN 286 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 113/265 (42%), Gaps = 14/265 (5%) Query: 32 FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTC- 90 A M +H H E+ F G+ L+++ + G + + H+ + Sbjct: 16 REAAFRMDETHSHDCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEIHKTSYGSNDK 75 Query: 91 ----QSMAIFNLPMHLFLSWPLDKDLI-NHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 ++ F++ +L L KD + +++T G++ ++ + R E P Sbjct: 76 VRQQRTALRFSIKDTDWLCSALGKDFVKDNLTAGIIEVPDKRKEYIENLITRMIYENQMP 135 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 +E L++ + + + F + L TS ++ + + ++ NYD Sbjct: 136 DE----LSMGMVKTLFQEFMIFVLRCKLYGDTSAHEIDA----QNSTIQDVATYVYNNYD 187 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + + ++DVA+ ++ +Y F++ K+Y+ +RI LL +T+ SI DIA Sbjct: 188 KQIYLDDVAKQFSISRSYLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFA 247 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYR 290 GF S+ F F + G+SP +YR Sbjct: 248 CGFNDSNYFGDAFRRIKGISPNKYR 272 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 116/280 (41%), Gaps = 21/280 (7%) Query: 31 EFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT--DTG 88 F + H E+ G + I I I + PH+ Sbjct: 32 RFHDTSWHMEPNKHECFEMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHKFIVKSES 91 Query: 89 TCQSMAIFNLPMHLFLSWPLDKDLINHV-------THGMVIKSLATQQLSPFEVRRWQQE 141 C+ + + ++ F D L N + T + ++ + + R +E Sbjct: 92 GCEFIVLSFKFVNRFDGQYSDVSLENFLDFVSGKETGPFITLKVSQKNDIIVLLNRILKE 151 Query: 142 LNSPN---EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLG 198 +P+ E + L + E+ +++ R WE + NK+ + + + + Sbjct: 152 RENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKE---------LIQASVN 202 Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +I NY++ +++ D+A +V L+ +Y F+ M ++ Y+ +R+ + LL DTD Sbjct: 203 YINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNR 262 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 I DIAL+ GF + RF F KYV ++P QYRK Q ++ Sbjct: 263 ISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNVQVKKH 302 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 113/273 (41%), Gaps = 12/273 (4%) Query: 25 YQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL 84 ++ E R + + HWH VE+ + +G +++ IN+ + + + H + Sbjct: 16 FRMFIFEGRDGNYRVSKHWHQSVELFLVLEGTLDFFINSRQYTLKPNDFVIVNPNEIHSI 75 Query: 85 TDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNS 144 + + +PM F + D+ I K+ L R +++ Sbjct: 76 -ECPDPNITIVLQIPMKSFEGYMSDESRITFADKDESQKARLV-ALVTAMYRTYEKGEFG 133 Query: 145 PNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENY 204 +++ ++ + L++ F + + + V + K +SQ+ ++ ENY Sbjct: 134 YRLKVKSQFMEFLYLIVTEFRIEQIDKVRVQQKRHLDK----------LSQVTQYMKENY 183 Query: 205 DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIAL 264 D+ L++ VA +Y +F+ Q + Y+ +R+ + L ++D+ + DIAL Sbjct: 184 DKELSLEMVASRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYVGDIAL 243 Query: 265 TAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 GF + F F K G P QYRK Q++ Sbjct: 244 DHGFADARAFAKAFKKRYGCLPSQYRKQMNQKQ 276 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 99/255 (38%), Gaps = 11/255 (4%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG-TCQSMAIFNLPM 100 HWH +VE+ V G ++ +++ G I H ++ Sbjct: 44 HWHDEVEIIVIKKGSGIVSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIMEYENILFKS 103 Query: 101 HLFLSWPLD---KDLINHVTHGMVIKSLATQQLSPF--EVRRWQQELNSPNEQIRQLAID 155 L S D I + G + +P+ V E++ + Sbjct: 104 SLLKSSGYDLCNDKFIQPLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQL 163 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 I L + + NK ++ S+ + + +L +IA N+ + + I D+A Sbjct: 164 SIKAHLFQILYTLVSNCGQNKIKPINQKSLKK-----IKTILSYIANNFQENIAIEDIAN 218 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 + + +Y M F+ M ++ QY+ R+ LL+ T +ILDIA GF + S F Sbjct: 219 YCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFN 278 Query: 276 STFGKYVGMSPQQYR 290 F K G+SP++YR Sbjct: 279 RCFKKKYGVSPRKYR 293 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 120/284 (42%), Gaps = 13/284 (4%) Query: 14 QTRSPLSLYSEYQRME-------IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKV 66 +T+ P L +E R++ P +P HWH E++ G+ E+ +N Sbjct: 2 ETKQPPRLTNEDYRLQPRAPVQVFHGIHPGTIPL-HWHEFYELSYVVGGEGEHRLNGSAY 60 Query: 67 NINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLA 126 ++ G + L H+L + + I+N+ +F +D +L + + G ++ Sbjct: 61 PLSSGTLFLLTPADFHELVSVED-KPLEIYNV---IFTEAMMDDNLYHWLFGGKLVLHAQ 116 Query: 127 TQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVS 186 +++ ++ + + R+ + I L+R + N T+ + + Sbjct: 117 LEEMQHRQIFADYERMREETGASREGSEIAIRATLQRLLVDLNRGSTANCALPTN-GTGN 175 Query: 187 RHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRIN 246 R + + L +I ++ + L + D A + +A Y F + + + ++Y+ +R+ Sbjct: 176 RQLNVNLQRALIYIHHHFREDLRLEDAAAQAQYSATYFSECFSKSVGQSFQRYLQNVRMQ 235 Query: 247 HVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +LL + + +I +GF + F F + GMSP+QYR Sbjct: 236 FAESLLRVSSLPVTEICYASGFNTLGHFERVFRQRKGMSPRQYR 279 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 111/277 (40%), Gaps = 18/277 (6%) Query: 23 SEYQRMEIEFRAP--HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACT 80 +E + E A M SH+H E+ G +++I + + + +F Sbjct: 10 AEGRPFASERIAGVNDNMVRSHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPPFV 69 Query: 81 PH-QLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ 139 H + + + S ++ ++ + L Q +P + Sbjct: 70 MHHSFEENDVPFRRLLLYFNPEVIRS----PQILRTLSERARVYKLPRAQSAP--IYNLM 123 Query: 140 QELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGF 199 +++ E+ + + I LM+ +L + R + + V+ ++ + Sbjct: 124 KDILQEQERDDLYSRELITLMVNALAL---------QLVRNSDEAARPEQRNRVTDIINY 174 Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 + E++ + +T+ +A H ++ + F+R T+ QYI +R+ H + LL ++D SI Sbjct: 175 LHEHFTEDITLEQLANHFYVSQYHLCREFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSI 234 Query: 260 LDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 +I+ GF + + F + GMSP Q ++ +R Sbjct: 235 TEISKRVGFSNVTHFNRVYKSVTGMSPSQNKQAYLKR 271 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 18/283 (6%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT---DTGT 89 R M HWH +VE+ G+ +N E+ NI++ H ++ + G Sbjct: 30 RIKGNMVKHHWHEEVELLYFSGGEFCLEVNMERFNISEECFYFINPGELHSISVEKNGGC 89 Query: 90 CQSMAIFNLPM--HLFLSWPLDKDLINHVTHGMVIKSLATQQLSP--FEVRRWQQELNS- 144 ++ +F++ M + + +LI V +G + ++ P VR+ +E+ + Sbjct: 90 VENAVVFHMDMLNSAYALDQIQTNLIQPVQNGSIQFPRCLRKNEPAFEPVRKSYEEIRNV 149 Query: 145 -------PNEQIRQLAIDEI--GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ 195 N + D+I L +K L + N + + H + Sbjct: 150 FGGDSFRENYYDGEAVTDDITRQLFIKSALLRILAVLSANNLFEVTEKN-HDHRIETIKT 208 Query: 196 MLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT 255 L +I ENY + + I D+A + +N Y F++V+ + +Y+ RI L ++ Sbjct: 209 TLTYIQENYKEKIYIRDLAGLIGMNEQYFCRFFKKVIGRSPMEYVNEYRIKRAIHYLKES 268 Query: 256 DKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 D ++ +I L G+ + F F KY +P QYR+ S + Q Sbjct: 269 DLTVTEICLECGYNNLGNFLREFRKYTSTTPLQYRRHSLKETQ 311 >UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC61_9FIRM Length = 298 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 120/262 (45%), Gaps = 10/262 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ--LTDTGTCQSMAIFNLP 99 HWH ++E+ + DG + Y +N ++ G I L A H + D + ++I LP Sbjct: 41 HWHPEIEITLVLDGQILYKVNQCTYHMKAGDILLGNANVLHAGFMEDMKDGKYVSITFLP 100 Query: 100 MHLFLSWP--LDKDLINHVTHGMVIKSLATQQLSPFE--VRRWQQELNSPNEQIRQLAID 155 ++ S+ L + + H + ++ P+ + +E+ + E+ ++ Sbjct: 101 KIIYGSYGSILRRKYVEPFLHNFSLPAVYIDYSQPWHEVFSEYVREIITLYEEKKEFYEL 160 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 +I L++ W +L N S+ + + +++ ++ NY + + D+AE Sbjct: 161 DITGTLQKL----WRCMLQNLPENLPYTEHSKLERNRMREIMDYLEYNYMNKIQMKDIAE 216 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 + L + +F+R M +++ ++ R+ L +D SI+++A +GF S+ + Sbjct: 217 EIHLCESECSRLFKRYMNVSLFTFLQEYRVERSLEFLLSSDDSIMEVAQKSGFTDSNYYA 276 Query: 276 STFGKYVGMSPQQYRKLSQQRR 297 F + G SPQ+YRK + ++ Sbjct: 277 KIFSRVKGCSPQKYRKQNTKKE 298 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 113/279 (40%), Gaps = 19/279 (6%) Query: 28 MEIEFRAP-HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD 86 +E + R H M T+H+H E + G+ ++ I + I G + L H+ ++ Sbjct: 21 IEFDRRIGYHSMDTTHYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSE 80 Query: 87 TGTCQSMAI---FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE--VRRWQQE 141 I ++LP LS + L++ I L Q+ E +E Sbjct: 81 LSQPNHERIVLHYDLPFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRE 140 Query: 142 LNSPNEQIRQLAID---EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLG 198 L + + EI L R +L + T K V+ ++ Sbjct: 141 LQECPPGYQLHVRNMATEILLFTARHALKRKSLPSIELTPVQQK----------VTDIIR 190 Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 I +++ + L ++++A+ ++ + +F+ V QYI RI LL +TD S Sbjct: 191 HINQHFREPLPLDELAKQFFISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWS 250 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 I I+ GF + S F F + G+SP+ YRKL Q ++ Sbjct: 251 ITQISERCGFENFSHFGKVFKELSGLSPRDYRKLEQNQK 289 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 113/291 (38%), Gaps = 22/291 (7%) Query: 14 QTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHI 73 + P+ ++ Q ++ + ++ HWH E+ V G + I++E + G + Sbjct: 15 EKMHPVQIF---QNRALQKKPGELILYLHWHEHFEIIVMQQGSAVFHIDSESYEAHPGDV 71 Query: 74 TLFWACTPH---QLTDTGTCQSMAIFNLPMHLFLSWPLDK---DLINHVTHGMVIKSLAT 127 A H L + ++N LF +W D + G V + Sbjct: 72 LFVPAGALHVGYSLCEGDLSYLAIVYN--SSLFQNWMQDSLHTKYVLPYLEGRVQLPVKP 129 Query: 128 QQLSP------FEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTH 181 +L P + + + E + + + ++ ++L S L + + + Sbjct: 130 TRLDPSCADYYYLLEQANSEFKAKQPAYQLMVKSQLHMLLTLLSRKFLPHQLPEQATNQY 189 Query: 182 KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYIT 241 H + ++ +I N+ T+ D A + LN ++ +F+++ T Y+ Sbjct: 190 -----VHNREQFKALIEYIEANFADKQTVADAARRMNLNVHHFCKMFKKLTGRTFIDYVN 244 Query: 242 AMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 R+N LL D SI +IA G +S+ F + KY G++P Q RK Sbjct: 245 VCRVNEAERLLLAGDLSITEIAGCVGCDNSNYFTKMYKKYKGVAPSQLRKQ 295 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 108/255 (42%), Gaps = 12/255 (4%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM- 100 HWH + E+ G + I+ E G + H + F P+ Sbjct: 48 HWHDEFEIIYVKSGLLTVSISGESYIGKAGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLK 107 Query: 101 --HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 LD L+ + G ++ + + + + + N++ +I Sbjct: 108 YISFRTDDMLDDKLLEPLNSGHLMINPRVKDSAKELCEQLIDIYMAENDETESKITAQIK 167 Query: 159 --LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 ++L +F L W+ V + + +N V + +M+ +I +N+ +++ + E Sbjct: 168 TKIILLQFILEMWKKGFVIENDTSGRNIVEK-------EMVSYIQQNFTGKISLKEFGEQ 220 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 L+ Y F+ +T+ QYIT +R+ + + LL DTD S+ + A+ +G+++ S F Sbjct: 221 FHLSEKYISRYFKEHFHITLSQYITYLRLENAKQLLQDTDLSVTETAMQSGYQNVSYFIR 280 Query: 277 TFGKYVGMSPQQYRK 291 +F K G+SP +YR Sbjct: 281 SFKKAYGISPLKYRN 295 >UniRef50_A3I1S3 Melibiose operon regulatory protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I1S3_9SPHI Length = 254 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 127/258 (49%), Gaps = 10/258 (3%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 M H ++E+N + + YL +K+ I TLFWA TPHQ+ + Sbjct: 1 MHRPDRHNEIEINFFPEEGITYLFQGKKIKIPANRFTLFWALTPHQIVAFEAGLPYYVCT 60 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE--VRRWQQELNSPNEQIRQLAID 155 +P +FL W L + + +G +I S E +RW + ++ ++A+ Sbjct: 61 VPFSVFLEWKLPASFVEKILNGEIISEANPIYSSVDETNFKRWFDDFQ--EKKNPKIALL 118 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 E+ + R + + TS++ S + A V ++ FIA++Y + + ++D+ + Sbjct: 119 EVQGRVNRMAYE-----YIPSTSKSISTSHIKEANQ-VEKIAMFIAQHYTEPIKVSDIGK 172 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 V+L+ ++A IF++ T+ +YIT RI+H + LL +D I +A GF+S SRF Sbjct: 173 AVELHPDHANTIFKKTFGTTLSEYITEERISHAQRLLLTSDLPITQLAFNCGFQSISRFN 232 Query: 276 STFGKYVGMSPQQYRKLS 293 + F K G +P+ +RK + Sbjct: 233 AAFLKITGYTPRDFRKSN 250 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 4/255 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP-- 99 HWH +++ G++ + + + +G + H T F P Sbjct: 57 HWHDEIQFTYVSKGELTMQVEGREYVLKEGEALFINSGLIHVTTSISEDGQYEGFMFPEK 116 Query: 100 -MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 + F ++++ + V+ + S + + N + + Sbjct: 117 LLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRESAEDEKILSDIRNLRELFNNKENVTAFE 176 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSV-SRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 + + W I+ N + K Q + +M+ +I E+Y +A+T+ ++AE Sbjct: 177 YEVAVRMTAIWLQIVRNVSDTMQKMPACYLQRQERMKKMMQYIVEHYHEAITLKEIAESA 236 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 ++ F+ +++ T Y+++ R+ LL TD I DIA GF SS F Sbjct: 237 SISIEECRRCFKDIIKETPMHYLSSYRVMVGMELLRTTDLDITDIAFRVGFNDSSYFIQA 296 Query: 278 FGKYVGMSPQQYRKL 292 F K GM+P+QYR Sbjct: 297 FKKKNGMTPKQYRNH 311 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 111/278 (39%), Gaps = 14/278 (5%) Query: 18 PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFW 77 PL +YS + + + HWH ++E G + + ++ G Sbjct: 17 PLQVYSHHD------KDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFTLHPGEFCFIN 70 Query: 78 ACTPHQLTDTGTCQSMAIFNLP--MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE- 134 + H++ G AI P + L I VT G +I SP E Sbjct: 71 SGELHEIKSGGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFPTLPSVFSPEES 130 Query: 135 --VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY 192 + QE+ + A I + + + ++ + + + K + +Q Sbjct: 131 QMILFHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISSK---EKDSQNK 187 Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + +++ +I ENY +++ D+A+ ++ NY F++ + +I RI +L Sbjct: 188 LKKVIEYIHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQIL 247 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +D++ + +A++ GF + S F F +Y ++P +YR Sbjct: 248 TDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYR 285 >UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KTC0_CLOPH Length = 298 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 117/271 (43%), Gaps = 11/271 (4%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 + MPT H+H + EV +G+ Y I ++ + +G + H+ GT I Sbjct: 24 YNMPTKHFHDEYEVYYLLEGERYYFIEHQTYLVKKGSLVFVNRGQIHKTGLAGTSYHDRI 83 Query: 96 FNL----PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQ 151 P F S+ D L + + + L + RR ++ L S + +I+ Sbjct: 84 LIELKEEPFASFFSFFGDLSLKDFFSKHYGVLELEEKDQ-----RRIERLLTSISTEIQN 138 Query: 152 LAID-EIGLMLKRFSLSGWEPILVNKTSR-THKNSVSRHAQFYVSQMLGFIAENYDQALT 209 +I EI +M+K L + T+ + + V ++ +I N ++ Sbjct: 139 KSIGFEISVMMKLAKLLIFSMRCKADTNTFIPATTATTAKHRKVDEVASYIVNNCTNPIS 198 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++ +++H ++ Y IF+ V T+ +YI R+ + LL ++ +I +I+ GF Sbjct: 199 LDALSKHFFVSKCYLSRIFKEVTGFTVNEYINIHRVQKAQYLLLYSESNISEISAQLGFE 258 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 S + F F KY SP +YRK +++ Q Sbjct: 259 SITYFERVFKKYTESSPLKYRKQNRKEIQPI 289 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 104/256 (40%), Gaps = 12/256 (4%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD--TGTCQSMAIFNLP 99 HWH E G + +++ ++ +++G + H C A+ P Sbjct: 37 HWHEGFEYLTVTKGRAVFKVDDLEIEVSKGEGIFINSNVLHSAHSINEEECSFFAVVCHP 96 Query: 100 --MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE- 156 + +++ +++ IN + + + + ++ WQ+ + Q+ + ++ Sbjct: 97 AFLSSYINDCINQRFINPILNHSLYFPIHLKKDVD-----WQRNILLLLTQVYDINKEKE 151 Query: 157 --IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 L+LK W + N +K S + + + +L +I ENY + +++ A Sbjct: 152 FGYELLLKSKIYEIWFECIKNAKKSINKGSNTSYKTERMKVVLNYIHENYFNKIVVSEFA 211 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 V ++ + F+ + T+ Y+ RI LS T+K I +IA GF S F Sbjct: 212 SLVHMSDEHFCRFFKAMTHFTLVSYVNRYRIERSCVFLSQTNKKISEIAGDVGFGDISYF 271 Query: 275 YSTFGKYVGMSPQQYR 290 F K +G +P YR Sbjct: 272 NKVFRKIMGCTPVDYR 287 >UniRef50_Q2CK10 Regulator of melibiose operon n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CK10_9RHOB Length = 306 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 5/287 (1%) Query: 13 KQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 R +L S R + P +M + HWHG VE N + Y ++ ++V++ + Sbjct: 17 SHERHFYALSSAIGRFGMRLFVPTVMASPHWHGHVEGNFVTGARLVYDVDGDRVDVPENR 76 Query: 73 ITLFWACTPHQLTDT----GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQ 128 + LFWA PHQL + +A LP+ FL P L + G + +L + Sbjct: 77 LILFWAGLPHQLREVIPTGDAPPRLANIYLPLDSFLYMPHIARLQVSLLGGA-MAALPEE 135 Query: 129 QLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 S + W ++ + + ++ E +L+R L + +S Sbjct: 136 ACSAERIEGWYKDYRANEYERLEIMKMEFNALLRRALLDDVPYLRDGLVEMDEGRILSSV 195 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 +V M+ I E+ + L+ DVA + NYA+ +F R M++ MK++I MR+ Sbjct: 196 HIQHVVAMVKHILEHLSEPLSNADVAAVTGFHQNYALSLFSRTMRMPMKRFIIRMRLLRA 255 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 RALL + +I + +GF S+S+FY F G+SP Q R Q Sbjct: 256 RALLMGSSMAISQVVEQSGFTSTSQFYQHFKTAYGLSPHQMRARYTQ 302 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 105/269 (39%), Gaps = 19/269 (7%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG--TCQS 92 P + +HWH E + +G + Y +N + + +G + H C Sbjct: 34 PTMAAANHWHTDWEFILLLNGKMSYSVNGKSYELQEGQAIFINSEQMHYGYSADGSDCNF 93 Query: 93 MAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRR----WQQELNSPNEQ 148 + I P + + + I + +PF + WQ+ L + Sbjct: 94 ICILFPPSLISSITRIKETYI---------LPVCEDTSNPFFILHPEITWQRNLIELLKN 144 Query: 149 IRQLAIDEIGLM----LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENY 204 + +L +E + F+ + K S + + + + M G+I +NY Sbjct: 145 VYELCNEEKDGFELHVMSLFNTICFSLYNNIKDSISIQETADDKKLEAMHNMTGYIQKNY 204 Query: 205 DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIAL 264 + +T+N++A + + IF+ ++ T Y+T R+ LL + S+ +IAL Sbjct: 205 QKRITLNEIAAAGNVCRSSCCDIFKLILNKTPVSYLTEYRLEKSIELLKISSLSVTEIAL 264 Query: 265 TAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 GF SS F F K +G +P QYR+ Sbjct: 265 QCGFTGSSYFTEIFHKTLGCTPSQYRRKK 293 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 110/306 (35%), Gaps = 29/306 (9%) Query: 3 TDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLIN 62 + S R P Y + + HWH + E +G+ + ++ Sbjct: 6 RRSLKESKSHGNERQPFGTY------WYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVD 59 Query: 63 NEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVI 122 + + G H G Q A F+L +F + L + V +V+ Sbjct: 60 TDYFPVGAGEAVFIDGGDIHAAHAHGD-QGCAFFSL---VFDTQLLASAHYDAVQENLVL 115 Query: 123 KSLATQQLSPFEVRR--------------WQQELNSPNEQIRQLAIDEIGLMLKRFSLSG 168 + P +RR + ++ + + LML + +G Sbjct: 116 PLQERKATFPRHIRRETAADLSLLEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATG 175 Query: 169 WEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIF 228 + +SR+ + + R + ++ I NY + + ++A + ++ F Sbjct: 176 RAVNRSHSSSRSESSKIDR-----LKTVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFF 230 Query: 229 QRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQ 288 + + + T YI + RI LL + ++ I DIAL GF + S F F K + SP + Sbjct: 231 KSMTRQTPMDYINSYRIRQAAELLREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSE 290 Query: 289 YRKLSQ 294 +RK Q Sbjct: 291 FRKRLQ 296 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 6/263 (2%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 H H E G+ N + + + +G + + A PH+L + + Sbjct: 31 DFHMGFHQHDWTEFMYVISGNCTVETNKDVIAMRKGDLIMLDAGVPHRLI-VESGSPCRM 89 Query: 96 FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI- 154 N+ + + H + L Q+L +R ++ + + +L + Sbjct: 90 LNVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQRLDTIVLRDYEDIQVNLRNLVFELDLG 149 Query: 155 ----DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTI 210 ++ M+ +S + + KNS R YV Q +I + YD A+ Sbjct: 150 GEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQIHHYVRQATEYIHQYYDTAIQA 209 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 D+A V L+ Y IF+ M T+ +Y+ +R++ + LL+ TD I+++A G S Sbjct: 210 KDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKMLLARTDVPIIEVADHIGLNS 269 Query: 271 SSRFYSTFGKYVGMSPQQYRKLS 293 F F K G+SP +YRK Sbjct: 270 RQYFSMLFKKMTGISPAEYRKSK 292 >UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BDP1_9FIRM Length = 321 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 115/280 (41%), Gaps = 32/280 (11%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH--QLTDTGTCQSMAIFNLP 99 HWH ++E+ G +EY++N+++ I++G + H + D C +++ P Sbjct: 43 HWHPEIELTWFVSGQMEYVVNDQRYIISEGEGIFCNSNALHAGYMIDDQDCNYISVTFHP 102 Query: 100 MHLF--LSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID-- 155 ++ + L ++ +T SL + P WQ E+ ++I L Sbjct: 103 KFIYGYENSILQTKYVDFITSNEFWSSLVLKPEIP-----WQNEIIEYIKEIYTLTCQVQ 157 Query: 156 --------------------EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ 195 + + W + ++ + + Sbjct: 158 SSSDAFIPGYEGIAEQPELPDYEFRIHLLLCEIWHRLYLHYVQIAQDTPHPQKHLQRLKD 217 Query: 196 MLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT 255 +L ++ E+ + L++ D+A H L + F++ M++T+ Y+ + RI + LL D Sbjct: 218 ILSYLQEHASEELSLEDIAAHAGLCKSECCRFFKKYMRMTIFDYLLSTRIQNSIPLLMDG 277 Query: 256 DKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 + +I IA GF S + + F +Y+GMSP QY+K + Q Sbjct: 278 E-NITTIAGLVGFSSPAYYGQIFKRYIGMSPSQYKKNAAQ 316 >UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=B0P341_9CLOT Length = 282 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 122/285 (42%), Gaps = 15/285 (5%) Query: 14 QTRSPLSLYSEYQRME---IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQ 70 + + L + +E + E R + + HWH +E+ F G + + +N+++ + Sbjct: 3 EIQHELIMTNEDLPFKMFLFEGRDGNYIREKHWHRSIEIFAVFQGTLGFYLNDQEYLLEC 62 Query: 71 GHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL 130 G + + H + + +P+++F + I H + ++ Sbjct: 63 GDFIIVNSNEVHSIHAPKE-NMTVVLQMPLNMFEKYYTGDQFIC-FAHAPQAQDEQLMEM 120 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 + + + +I+ L D + LM+ R+ P ++++ + K SV Sbjct: 121 ICEMYMAYSDKHCGYDLKIQSLFYDMLYLMVTRYREINVHPDILHQHKQLTKLSV----- 175 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 + ++ E+Y + L+++ +AE + +Y +FQ+ + K Y+ A+R H Sbjct: 176 -----ITDYMKEHYKEELSLSKLAEIFGYSPSYLSRMFQKYAGINYKDYMQAIRTEHGYR 230 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 L +TD +I DI++ GF ++ F F K G+ P ++RK + Sbjct: 231 QLVETDMTISDISMENGFPNNKAFSKAFYKKYGIMPAEFRKRQKN 275 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 26/264 (9%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM- 100 HWH + E+ G + I+ E G + H + F P+ Sbjct: 35 HWHDEFEIIYVKSGFLTVNISGENYIGKPGDAFVVSPGNLHFMGSKTGTVDYFTFLFPLK 94 Query: 101 --HLFLSWPLDKDLINHVTHGMV---------IKSLATQQLSPFEVRRWQQELNSPNEQI 149 + LD L+ + G + IK L Q + +E ++ ++ELN + Sbjct: 95 YISFYTDDILDDRLLEPLDSGRLMISPSVKDTIKELCEQLIEIYEAKKSERELNITTQIK 154 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 + ++L +F L WE + + + + +N V + +M+ +I +N+ ++ Sbjct: 155 TK-------IILLQFILEMWEKGFIVENNTSGRNIVEK-------EMVSYIQQNFTGKIS 200 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 + + E L+ Y F+ +T+ QY+ +R+ + + LL DTD S+ + A+ +G++ Sbjct: 201 LKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQLLQDTDISVTEAAMRSGYQ 260 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLS 293 + S F +F K G+SP +YRK Sbjct: 261 NISYFIRSFKKTYGVSPLKYRKKQ 284 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 114/260 (43%), Gaps = 13/260 (5%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ-SMAIFNLPM 100 HWH ++EV G ++ + ++ +N G + + H+ + C+ +F+ + Sbjct: 45 HWHEELEVIFLPSGTLDVRVPGKRFRMNAGDCLVINSNILHEAETSNECRLHSLVFHTDL 104 Query: 101 HLFLSWPLDKD-----LINHVTHGMVIKSLA-TQQLSPFEVRRWQQELNSPNEQIRQLAI 154 + LI+ T V+ S T +S + + + N + + + Sbjct: 105 ISGSDSSVFYKKYMYPLISSCTLDCVLFSAEDTSGVSIRQCFMMAFDALANNREGYEFTV 164 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 E L + ++P + + +++ ++S F + +M+ I Y + L + D+A Sbjct: 165 RECLSRLCFLLCTFYKPEISDTSAKPDQDS------FRIKEMIHMIQSRYAEPLKLCDIA 218 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 + + + F R + ++ QY+ R++ LL +T+KSI +I+ GF S S F Sbjct: 219 QAANIGERECLRCFHRTLGISPMQYLIRYRLSKGALLLINTNKSIAEISTRCGFDSPSNF 278 Query: 275 YSTFGKYVGMSPQQYRKLSQ 294 TF + SP++YRK ++ Sbjct: 279 SLTFKRKYQCSPREYRKNNK 298 >UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X9W6_OXAFO Length = 293 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 105/256 (41%), Gaps = 9/256 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++ +G++E +E++ + GH H + +G C + Sbjct: 44 HWHEDLQFIYVLEGEIEVRTLDEELKLAAGHGVFINKNVVHSVNQSGDCHYKSFIFPDYF 103 Query: 102 LFLSWPLDKD-LINHVTHGMVIKSLATQQLS--PFEVRRWQQELNSPNEQIRQLAIDEIG 158 L + + L++ + M + V ++L+ + + + E+ Sbjct: 104 LRFYFGSPAEHLVDSLVENMDVPLCRFIPGIGWCDTVLSILRKLSFLEKNGNEFYVYEVL 163 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 + L L + K + + + L +I ++Y +A++++D+A Sbjct: 164 VFLTSLWLE------IRKNVSLPSGKKEKPVSRRMQRFLAYIEKHYAEAISLDDLAGSGN 217 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 ++ + + F+ MQ T +Y+ R++ LL +TDK + +IA GF +S F F Sbjct: 218 VSKSECLRCFRVSMQTTPYKYLVEYRLSKAAILLQETDKPVGEIASCTGFHQASYFGKCF 277 Query: 279 GKYVGMSPQQYRKLSQ 294 + G SP+ YR +Q Sbjct: 278 REKTGFSPRDYRGKNQ 293 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 15/264 (5%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E+ + G + Y I+ E ++ +G + L H + ++ + Sbjct: 11 HWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSMVSDSLVFHL 70 Query: 102 LFLSWPLDK----DLINHVTHG-----MVIKSLATQQLSPFEVRRWQQELNSPNEQIRQL 152 FL + + +N V G V+K A E E + + +L Sbjct: 71 DFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECFNGKQYGYEL 130 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 E+ + L R ++ V K TH A+ + ++L +I NY + LTI + Sbjct: 131 YTKELLMRLFRLL---YQYGCVAKHEGTHG---EFGAEEKLKEVLSYIQSNYRETLTIEE 184 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 ++ + + M F+R +T +YI RI A L +T++ ++DIA+ GFR+ S Sbjct: 185 LSSVCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFRNIS 244 Query: 273 RFYSTFGKYVGMSPQQYRKLSQQR 296 F F + G++P YRK S++ Sbjct: 245 YFNKVFKERFGVTPGSYRKNSREN 268 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 3/271 (1%) Query: 23 SEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH 82 E+ I P +H+HG E+ G+ Y I + +I G + L H Sbjct: 17 GEFYYHRIHRTKP-FERNNHYHGTYEIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVH 75 Query: 83 QLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQEL 142 + + G + I FL L+ GM + +L+ E Q L Sbjct: 76 KTSGHGDPEHERIVINFSDSFLGKGHP--LLASGLLGMFNQDRPLLRLTVPEQAIIMQIL 133 Query: 143 NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 N ++IR+ + ++ + + + ++ N ++ ++ FI Sbjct: 134 NKMADEIRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITDVVKFIHV 193 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 +Y +T+ ++E ++ Y IF+ + T+ Y+ RI + LL+DTD I+DI Sbjct: 194 HYADKITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTDLKIVDI 253 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 A + GF S + F TF K + M+ QYRK++ Sbjct: 254 AESIGFESLTHFDRTFKKIMNMTASQYRKIN 284 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 111/298 (37%), Gaps = 13/298 (4%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 + + + + P + Y ++ + HWH +E+ G Sbjct: 4 LEYENLLENKTHADPMFPYNTYLCSIPLDFNS------VSLHWHEFMEIIYIKKGKGNVT 57 Query: 61 INNEKVNINQGHITLFWACTPHQLTD-TGTCQSMAIFNLPMHLFLSW---PLDKDLINHV 116 ++ + +G I + H ++ G + +F S LD + + Sbjct: 58 VDFTTHYVEEGDIIIILPGHIHGISQHEGYSMEYENILFSVDMFRSKNHDSLDSEFFLPL 117 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNK 176 G V + P + LN ++ + L LK + + N Sbjct: 118 LAGDVDIKSIYDKDDP-LYPQLSSCLNRVDKLCSETPKG-YHLALKGCYFEFFYVLFTNS 175 Query: 177 TSRTHKNSVSRHAQ-FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLT 235 T R + +R +L +I ENY +A++I D+A + + ++ M F+ M ++ Sbjct: 176 TVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDIASYCGFSESHFMRFFKNTMGVS 235 Query: 236 MKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 Y+ R+N LLS D S+L +A GF + S F F K G++P +YR+ Sbjct: 236 FVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFNRMFKKKYGVTPSRYRETH 293 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 121/281 (43%), Gaps = 13/281 (4%) Query: 31 EFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTC 90 E + +++ HWH Q+E+ G+ + I+ +K +++ I + H + C Sbjct: 25 ESDSENLIVKHHWHDQLELIHMKKGEFQVEIDMDKHVVHEETICFINSEELHFIKSNHPC 84 Query: 91 -QSMAIFNLPMHLFLSW-PLDKDLINHVTHGMV--IKSLATQQLSPFEVRRWQQELNSPN 146 +S +F+L M F + + LI + +G + + + E+ + E+ Sbjct: 85 KESAIVFDLKMLSFDMFDSIQGSLIQPLLNGELKMPHFIFKKDKHGEEILKEYSEILEAY 144 Query: 147 EQIRQLAID---------EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQML 197 + Q++ + + +K L + N N + Y+ + Sbjct: 145 KISGQISQNPEGNITEKLSSQIKIKASLLKILAILYENNLLIKENNKNKDYRVEYIKTAI 204 Query: 198 GFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDK 257 +I NY + + I D+++ + +N Y F+R++ T +Y+ RI + LL +T++ Sbjct: 205 SYIQNNYSEKIHIKDLSKQINMNEQYFCRFFKRMIGKTPMEYVNEYRIKKAKELLRETNR 264 Query: 258 SILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 ++DI L GF + F F K+ G++P +YRK ++ Sbjct: 265 QVMDICLECGFHNMGNFIKVFKKHTGINPMKYRKNFINKKS 305 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 8/254 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT--CQSMAIFNLP 99 HWH +E+ G ++ E G + + H ++ G+ + I LP Sbjct: 84 HWHEDMEIIAVKKGRGVVTVDMEPYEARAGEAVVVFPGQLHGISQCGSEAMEYENIIFLP 143 Query: 100 MHLF--LSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 L S D + +T G + K L P E +Q+ Sbjct: 144 SMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLPDYGAFM--ECIGILDQLCGKKNYAY 201 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 + +K W L+ R ++ + ++L ++ E+Y + +T+ D AE Sbjct: 202 QMGVKGTLF--WFLGLIAGIWGPEAAGQPRKSRERMKRLLEYMEEHYGEKITVEDGAELC 259 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 + ++ M F++ M + QY+ R+ +L T + +A GF + S F Sbjct: 260 FYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTPDPVTAVAQRCGFDNISYFNRL 319 Query: 278 FGKYVGMSPQQYRK 291 F + G +P +YRK Sbjct: 320 FRRKYGKTPGEYRK 333 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 9/267 (3%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNL 98 P H H E+ G ++ +++ ++ + QG L HQ+ G F + Sbjct: 101 PQPHKHDFFELVYVVRGSMKNVVDGRRILLEQGDFCLMNPNAVHQVETDGKDPLAINFLM 160 Query: 99 PMHLF----LSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 LF LS L+ +L + + Q F R ++ + S Sbjct: 161 KKELFNKAFLSIVLENELFANFFVDSIYHKKNKQNYLVFSARHLEEPIISQYLLQIFREY 220 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKN----SVSRHAQFYVSQMLGFIAENYDQALTI 210 + L +R S + V T + S+ +S+++ +++ENY A T+ Sbjct: 221 ENDQLYSQRVIESAMSCLFVEFTRSYKRELEFESLQDLPGGNISKIISYLSENYRTA-TL 279 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 A+ + Y + ++ + + + + R+ H LL T+ I D+A +G+ + Sbjct: 280 QTTAKQFNYHPKYLPNLLKKYLGQSFSEIVQQFRLAHACELLKQTELPISDVAQESGYTN 339 Query: 271 SSRFYSTFGKYVGMSPQQYRKLSQQRR 297 + FY F + GMSP YR +Q R Sbjct: 340 RTYFYKVFQQKFGMSPNDYRHQNQAPR 366 >UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGS5_CLOCL Length = 293 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 6/259 (2%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLI---NNEKVNINQGHITLFWACTPHQLTDTGTCQS 92 + H H +VE+ DG E + N + + +G L A T H+L G +S Sbjct: 30 NYKMDYHTHDRVEIMYVIDGQCEIDVATDNVNNLKLKKGDFILLDAGTVHRLIVLGE-KS 88 Query: 93 MAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQL 152 + N+ + I + + +L + PF + + ++ + I Sbjct: 89 CRMLNIEFSFIEDSDILTS-IRLLIEKVKSIALLFEMRCPFLLLKDNNDIYHSLKNIVIQ 147 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 E L +E +L+ + N + + Y+++ FI+ NYD+ +TI D Sbjct: 148 LGMESEENQFSIQLLFYE-LLLKISKVAMSNENTSTSNIYINKAKHFISMNYDKDITIKD 206 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 ++ +V +N +Y IF++ T+ +Y+T RI + LLS+TD I+DI G S Sbjct: 207 ISSYVNINEDYLNRIFKKHTGHTITEYVTLFRIEKAKMLLSNTDIPIIDICSYVGINSRQ 266 Query: 273 RFYSTFGKYVGMSPQQYRK 291 F F K G+SP +YRK Sbjct: 267 YFSQVFKKCTGISPYKYRK 285 >UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8V9_9FIRM Length = 300 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 106/274 (38%), Gaps = 5/274 (1%) Query: 25 YQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL 84 Y R I P + HWH +E+ +G++ Y IN+ + + + + + H Sbjct: 24 YIRTGILSNYPDMKALCHWHEDIELIYVIEGEMNYRINDRDILLKEKDCLVVNSRQLHYG 83 Query: 85 TD--TGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQEL 142 C+ + I P L S + + + I S Q L Sbjct: 84 YAHLRRECRFICILFHPGLLNASPKIYQYYVAPFIENKNIAYFHYAADSA--NHEQVQAL 141 Query: 143 NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV-SQMLGFIA 201 + ++ D L W + + S + ++ + +M+ +I Sbjct: 142 LNRILLLKTEEKDAYELEAISTLYLLWRILFLQHKSLLEQEPAYDYSDLTLQKKMVSYIY 201 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 E+Y LT++ +A ++ + IF+R ++ + + R+ R LL++T SI Sbjct: 202 EHYQDTLTLDAIAASGNISRSKCCIIFKRYLRQSPIDFANKYRLEVSRYLLANTRSSIAQ 261 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 IA++ GF S F F + G +P +YRK + Q Sbjct: 262 IAVSCGFNHLSYFSKLFCREYGCTPTEYRKAAHQ 295 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 108/261 (41%), Gaps = 4/261 (1%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 ++ HWH ++E G+ E+ I + + G + H Sbjct: 29 GQVIIHCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEGLFIPSGHLHGAYPVSDKPFSL 88 Query: 95 IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI---RQ 151 + F+S DLI S T + W ++ + + Q Sbjct: 89 YATVVHPDFIS-SFGYDLIQSRYIDPFKDSERTGPIKLCPTHYWMSDMLTMLQATISQFQ 147 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 + L++K L ++ + + + + + ++L FI E+YD+ LTI Sbjct: 148 QKEEGYELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIRQIKKVLQFIDEHYDEKLTIK 207 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 +A V+++ + F+ ++++T +YI R+N LL +TD++I+DI+++ GF Sbjct: 208 QLANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARLLRETDRTIMDISMSVGFDHP 267 Query: 272 SRFYSTFGKYVGMSPQQYRKL 292 S F F ++ +P ++R++ Sbjct: 268 SYFIKLFKRHKRCTPSEFRRI 288 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 116/283 (40%), Gaps = 16/283 (5%) Query: 18 PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFW 77 PL +Y+ R +F SHWH ++E +G E I+ + ++ G + Sbjct: 21 PLEVYNVEFRNSADF-------YSHWHDEMEFIYILNGSAEICIDFKIFSVTTGDFIIIP 73 Query: 78 ACTPHQLTDTGTCQ-SMAIFNLPMHLFLSWPLDKDLINHVT----HGMVIKSLA--TQQL 130 + H + + S + L LD IN V + + K++ + Sbjct: 74 NGSIHYMIGKENSKISYVALVFNLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIRTSNVG 133 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 V + + S N + ++ G + FS E + + + + + + Sbjct: 134 HAKIVNSFNNIIESYNNKSYGFQLEIKGSLFSIFSTIFKEGYISLNLNSENYSDLIKVEN 193 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 + +++ +I NY ++I ++A+ + + + + F+ T QYI RI Sbjct: 194 --LKEVIKYIQTNYKNPISIKELADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQKATL 251 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 LL DT+ SI +IA GF S F TF K++ +SP +YRK + Sbjct: 252 LLFDTNLSITEIAYEVGFGDVSYFIKTFKKFLSISPTKYRKSN 294 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 103/261 (39%), Gaps = 1/261 (0%) Query: 42 HWHGQVEVNVPFDGDVE-YLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH +E++ G ++ I+ QG I L + H + A+ Sbjct: 32 HWHESIEISYVLSGKIDDIYIDGIHYTSEQGDIVLINSNAIHSFSVVQGKNRKAVTFFIS 91 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 + FL + ++ + E+R + +R ++ I ++ Sbjct: 92 YEFLKTNYPDIDQIAFDCVSIDQNDEHKIKIFNELRENLDSIIRAFSNLRDDSLAHIKVI 151 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 + L + ++ ++ ++++ +I ENY Q L+I+ ++ L+ Sbjct: 152 GLSYELIYLLLKNFKISKKSFGEIKTKKYLDRLTEITNYIKENYSQDLSIDIISAKFNLS 211 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 Y F++ M +T+ YI +R+ L +TD+SI +IAL GF + F F Sbjct: 212 PEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLMNTDQSITEIALEHGFPNEKSFNKVFKT 271 Query: 281 YVGMSPQQYRKLSQQRRQTFP 301 + ++P QYRK + + Sbjct: 272 FYNITPNQYRKKIKALKSVIK 292 >UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDM6_9FIRM Length = 298 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 5/269 (1%) Query: 27 RMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD 86 +P + HWH + E + F G V Y + + +G + T H + Sbjct: 26 PCGCYNASPEVQVPWHWHEEYECSYVFHGAVTYHTPQGEFRLGEGDGIFLNSGTLHTVEV 85 Query: 87 TGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPN 146 +L H L + ++ + A Q L W E+ S Sbjct: 86 APAGSLKKS-DLVFHGRLIYGSRDSVLYQKYVQPLSAPDAFQTLILRRTVSWHAEILSRI 144 Query: 147 EQIRQLAIDE---IGLMLK-RFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 ++ +L +E ++ S ++ ++ + + QML ++ E Sbjct: 145 KKAVRLCQNEPEGYEFTVRSLLSEIFFDLYCYRNAPAAETSAATASENARIKQMLRYLQE 204 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 NY + +T+ ++A H + + FQ+V+ L+ QY+ RI LL ++D S+L+I Sbjct: 205 NYTRRVTVAELAAHANICERECLRCFQKVLHLSPIQYLIRYRIARSCILLRESDLSVLEI 264 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + GF S S F TF + G +P QYR+ Sbjct: 265 SNLCGFESPSYFTKTFRQITGGTPTQYRR 293 >UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8E9_PAESJ Length = 294 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 116/276 (42%), Gaps = 12/276 (4%) Query: 27 RMEIEFRAPHIMP------TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACT 80 ++ + +MP HWH +E + DG + + +N E V + +G + Sbjct: 19 NFQLYIKKGTLMPFDKYAAACHWHPDLEFILVLDGYMNFFVNGETVLLEKGTGIFVSSKR 78 Query: 81 PHQLTDTG--TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRW 138 H C + + P L + K+ + + + Sbjct: 79 LHYGYSPDKIDCSYIVVCIHPSLLGNEQWIGKEYWEEKFGPNTEDFIVLTEHESWHKDAL 138 Query: 139 QQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLG 198 LN E++ + I L+ SL+ + ++ + + + FYV +M Sbjct: 139 VS-LNQLYEEMHATKRNPIRLLSIAMSLTA---NIGDRIGEKKEPTAIDPSWFYVWKMTA 194 Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 FI +++ +T++D+A ++ + +F + ++ + Y+ RI LLS+TD+S Sbjct: 195 FIHGHFEHKITLDDIAAAGSVSRSQCCILFGKYVEQSPNTYLMKYRIKKSCELLSETDRS 254 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 I +IA++ GF+SSS + F K +G+ P +YR+ + Sbjct: 255 ISEIAISCGFQSSSYYTFVFRKELGIVPNEYRRQYR 290 >UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJC5_9CLOT Length = 309 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 117/285 (41%), Gaps = 12/285 (4%) Query: 18 PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFW 77 P+ +Y+ + IE M HWH +++ V G ++ ++ + +++G+ Sbjct: 27 PIEMYT-VTQGNIEPSGRGYMDL-HWHEELQFTVVTSGKLKLRVDGKLYTLDEGNGIFIN 84 Query: 78 ACTPHQLTDTGTCQSMAIFNLP---MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE 134 H T+ FN P + F ++++ + I + ++ + ++ Sbjct: 85 RNLLHITTEISDGGRYLSFNFPDKVVSFFSGSTMEENFVLPYVGNYGIAVVEFKRTTSWQ 144 Query: 135 ------VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 + + + E+ + + +E + +K + + K+ + NS R Sbjct: 145 KEILDTLLKMELLFKRRREKRQAVGREEYQIAIKIVEIWYMMICNIEKSGKKISNSYIR- 203 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 Q + ML +I Y + + D+A+ ++ F+ V+ + +Y+ RI Sbjct: 204 KQERIQAMLSYIHNQYMHPMCLADIAQAGNVSVGECCRGFKEVVCKSPNEYLAEYRILRS 263 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 + LL T+ S+ +++ GF S S F F K G++P+ Y+ + Sbjct: 264 KELLRGTELSVTEVSGAVGFNSVSHFIQCFKKMTGVTPKAYKNMK 308 >UniRef50_UPI0001C35ADD AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35ADD Length = 304 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 16/273 (5%) Query: 27 RMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD 86 ++ + + M HWH +E++ D + ++ IN +K + G ITL + H L Sbjct: 18 QLRLHRGQINYMILEHWHRSIEIDYLLDCEADFYINGKKKQVAAGSITLINSGDIHALEP 77 Query: 87 TGTCQSMAIFNLPMHLFLSWPLDKDL---INHVTHGMVIKSLATQQLSPFEVRRWQQELN 143 + LF+S+ K + I+ +T + + ++L + EL Sbjct: 78 REVPVDTEDKIHGISLFISYEFLKKICPEIDQITFELEGQEERLKELKEVFNSLIRLELA 137 Query: 144 SPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ---MLGFI 200 P +E G + K L +L+ + +N S +Q Y+ + +L ++ Sbjct: 138 PP---------EEYGYLKKNAMLHSLMYLLLTYF-KEPRNQSSVKSQKYIDRLRVVLDYV 187 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 ENY + LT+ VA+H ++ Y I ++ T K ++ +R++ L +TD S+L Sbjct: 188 EENYREPLTLQGVADHFSVSMEYLARILKKYTGNTFKTHLNQVRVSKAFRDLLETDYSVL 247 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 +IA+ GF + + F GM+P QYRK + Sbjct: 248 EIAMRNGFSDTRSLINVFRDTYGMTPSQYRKKN 280 >UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z0_9FIRM Length = 302 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 102/263 (38%), Gaps = 9/263 (3%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ--LTDTGTCQSMAIF 96 HWH +E G + Y +N +++ +N+G + A H + C + I Sbjct: 40 APCHWHDDIEWIYIITGKMRYYVNGKRLILNEGDSLMVNARQMHYGYAFEQQDCYFLCIL 99 Query: 97 NLPMHLFLSWPLDKDLINHVTHGMVIK--SLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 P + L + ++ + + +V R+ QE+ E Sbjct: 100 FHPSLFGNNQILQEKYFLPFFENTSLEFHHFYSNDEAGVKVGRYLQEVLLLKEDSDSG-- 157 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ-MLGFIAENYDQALTINDV 213 L + L W ++ KN + + + M+ FI ++Y + +++ D+ Sbjct: 158 --YELGVISCMLELWSFLIRTDLLSAAKNKSESEQELNIQKDMVSFIYQHYPEKISLTDI 215 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 A + + IF+ MQ + ++ R+ LL T KSI +IA+ GF S Sbjct: 216 AAAGHVGRSKCCQIFKHYMQQSPVDFLNTYRLKISCRLLCTTQKSITEIAILCGFNHLSY 275 Query: 274 FYSTFGKYVGMSPQQYRKLSQQR 296 F F + G +P++YR L + Sbjct: 276 FSKYFMECYGCTPREYRTLHEHE 298 >UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KK32_CLOPH Length = 295 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 116/256 (45%), Gaps = 6/256 (2%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT--DTGTCQSMAIFNLP 99 HWH ++E+ + GD+ Y +N+ +++++G + H T + C+ ++I P Sbjct: 40 HWHPEIELTLIVKGDMIYTVNDHPLHLHEGEALFGNVSSFHTGTKFENKDCEYISITFDP 99 Query: 100 MHLF--LSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 ++ + + + +T + ++ + + + A E+ Sbjct: 100 KLIYGYENSITYRKYVEPITQNFSLSAIQLDYSEEWHNNIIEIIKEIIAIGQNKEASYEL 159 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 ++++ L W+ + ++ S + + +L ++ NY LT+ ++AEH+ Sbjct: 160 DILMRLQQL--WKILYLHNNSAPAMTPYDKRNYDRIRSILSYVDNNYAMKLTLEEIAEHI 217 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 L + +F+R M++++ ++I RI L+D+ SI++IA GF S+ + Sbjct: 218 HLCKSECCRLFKRYMKVSLFEFILQYRIEKSLNYLADSQYSIIEIANFVGFNDSNYYSKV 277 Query: 278 FGKYVGMSPQQYRKLS 293 F K G SP +YRK + Sbjct: 278 FTKIKGCSPTKYRKKN 293 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 123/291 (42%), Gaps = 19/291 (6%) Query: 1 MNTDTFMCSSDEKQ-TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEY 59 M + F E++ P +Y+ + AP+ H H E+ G E Sbjct: 1 MAHEHFYVKRSERESLVQPELIYT-----GLLEDAPNWFNIQHSHDFCEILYVAGGAGEA 55 Query: 60 LINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHG 119 ++ +K + G + + T H+ + + + L + F L ++ + Sbjct: 56 ILEGKKFRLAPGDLVVVNPGTLHE-ERSDAKAPLRLIFLAIRDFAVPGLPAGCLSQEKYR 114 Query: 120 MVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSR 179 ++ ++ + +R QE +S E ++++ + +L +LV + R Sbjct: 115 VLSCGEYRYKMDIY-LRELLQETSSQIEFYQEISQGLVSALL----------VLVMRLIR 163 Query: 180 THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 + + +Q ++ ++ +N+ +T++ ++E V ++ +Y +F+ ++ +Y Sbjct: 164 INPEDEAALSQEC-QKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFKEQTGVSPIKY 222 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +T+ R+ LLS+T+ + +++ G+ + F F + G+SP +YR Sbjct: 223 LTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQ90_9FIRM Length = 295 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 13/264 (4%) Query: 34 APHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACT-----PHQLTDTG 88 H+ SHWH ++E DG +++ I + + ++G A PH + Sbjct: 34 QAHLQMISHWHDELEFIYILDGKMDFHIEEKILTASRGDFLAIHASAMRRSAPH---NGE 90 Query: 89 TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRR--WQQELNSPN 146 C+ + P L + + L++ + + SP RR +E+N N Sbjct: 91 DCRFIRALIHPSLLTENQSVRNRLLSPLLGNTSRRCFLVPSASPDAPRRGELLREINRIN 150 Query: 147 EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 E+ E +L + K ++ AQ +M+ +I+ +Y + Sbjct: 151 EKHLPGFELESIGLLHILLARLYALFPPEKQTQEDMPGTDISAQ---RRMVAYISHHYPE 207 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 +++ +A ++ + +F++ MQ + ++ R+ R LL T+ SIL+IA Sbjct: 208 KISLAGIAAAGSVSRSKCCQLFKKYMQQSPIDFLNRYRLEISRNLLDSTENSILEIANAC 267 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYR 290 GF S S + F + +P QYR Sbjct: 268 GFSSQSYYTKMFSEKFNCTPTQYR 291 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 115/281 (40%), Gaps = 12/281 (4%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 SE+ E HWH E+ G ++ +N+ + +N+ A Sbjct: 22 TSEFPIAFYEENLSSYSIPWHWHEDFEIIWVISGSIKVSVNSTEHILNKNQGIFINAGFL 81 Query: 82 HQLTDTGTCQSM---AIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRW 138 H + T + + +F+ + + ++ I + K+L L PF W Sbjct: 82 HSIHATNDGEYVLRSIVFHPRLIGSIDSIYWQNYIEPIIQN---KNLPYILLDPFI--NW 136 Query: 139 QQELNSPNEQIRQLAIDE---IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ-FYVS 194 Q ++ + + + + + ++ +L N + K S+ + Sbjct: 137 QDKILAYSISVWNRLYNTENGFEIYVRNELSQLILIVLTNHSICEAKPSIRNLRNADRIK 196 Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 ML +I ++ + +TI+ +A ++ + + F R + T QY+ RI +L D Sbjct: 197 TMLQYIQMHFSETITISTLARVALISESEVLRCFHRTIHSTPNQYLKQYRIQKACQMLID 256 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 TD + +DIA GF+SSS F TF + +G +P +YRK QQ Sbjct: 257 TDMTSIDIAFQCGFQSSSYFTKTFREQIGCTPLEYRKRDQQ 297 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 128/298 (42%), Gaps = 17/298 (5%) Query: 4 DTFMCSSDEKQ--TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLI 61 F+ + K+ + L + I +P HWH +++ + G + I Sbjct: 2 KNFVIDQNLKELTEHRTVELPVACYKTTINQNINGYIPL-HWHDEIQFVLILKGIALFQI 60 Query: 62 NNEKVNINQGHITLFWACTPHQLTD-TGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 N EK+ +++G + H + G+ + N+ H LS L + Sbjct: 61 NEEKIEVHEGDGLFINSGYLHMAEEKEGSDCTYICLNVSPHFVLSQELYSSYVQPY---- 116 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQL-----AIDEIGLMLKRFSLSGWEPILVN 175 + S L ++W + + ++I QL ++ EI + ++ + W+ ++VN Sbjct: 117 -MFSTNLPYLFLAGNQQWAKNILDAVKKINQLIQQKTSLYEIDITMQLTLM--WKNLVVN 173 Query: 176 KTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLT 235 + S + QML +I +Y + +T+ D+A+ +L+ + F+R++ T Sbjct: 174 GFQLEYDQS-EMIKSHRMKQMLNWIHLHYVEKITLEDIAKAGQLSRSECCRYFKRMLNKT 232 Query: 236 MKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 +Y+ RI LL + ++ +++ GF S+S F S F + + M+P Y+K++ Sbjct: 233 PLRYVMDYRIQKSLLLLQHPESNVTEVSYQVGFNSTSYFISKFQQAMNMTPLSYKKMN 290 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 105/256 (41%), Gaps = 9/256 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E+ G + I+ E + + + H + F P+ Sbjct: 35 HWHDELEIIYVKQGKLHVTISGENYIGSPKDAFVVSPGSLHLMGSPTGDADYYTFLFPLE 94 Query: 102 LFLSWP---LDKDLINHVTHGMVIKSLA---TQQLSPFEVRRWQQELNSPNEQIRQLAID 155 ++K +++ + G ++ S T + ++++ N + A Sbjct: 95 YISFQTDDLMEKSILSPLKRGRLMISPQINDTAADICERLIEINEQISGKNAEKTDAANI 154 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 E K + + N + + + + +M+ +I +NY + +++ + Sbjct: 155 EAQFETKITLIKFIRKMWRNGLILENGTNGTNTTE---KEMITYIRQNYTREISLKEFGA 211 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 L+ Y F+ +T+ QY+ +R+ H R LL ++ S+ ++A+ +G+++ S F Sbjct: 212 QFHLSEKYISRYFKEHFHITLSQYVNHLRLEHARQLLEESTASVTEVAMCSGYQNVSYFI 271 Query: 276 STFGKYVGMSPQQYRK 291 +F K G+SP +YR Sbjct: 272 RSFKKMYGVSPLKYRN 287 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 107/265 (40%), Gaps = 3/265 (1%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 ++ + M H H E+ G+ Y IN +G + + H+ + T Sbjct: 18 MQRKGFTEMNAPHVHEGYELYYLLSGERTYFINQSVYTAEKGTMIIINPHDLHRTSSTEV 77 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 + I H F+ L + +A V E+ + Sbjct: 78 QEFERILINFSHDFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAVEHMLMEMKKECKLK 137 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 ++ D + +L + + + + ++T +S++ +I ++ + +T Sbjct: 138 KEGHEDVVRALLFQLLFTIYRSLAGGGRNQTRPL---HPMDEKISEIASYINCSFQETMT 194 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++ +A ++ +Y +F++V +++YI +RI + L DTD+ ILDIA GF+ Sbjct: 195 LDGLAGQFYISPSYLSRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDEKILDIAADTGFK 254 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQ 294 S F F + VG+ P QYRK S+ Sbjct: 255 HISHFNKVFKEIVGIPPLQYRKKSR 279 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 102/253 (40%), Gaps = 5/253 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E+ + G + I N+K + +G + H + + I + Sbjct: 43 HWHKEIEIITIYKGTLYIEIENKKFTLKKGESLFINSEEMHFMR-MDAREECRIISFVFD 101 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 L I+ +I + ++LS E+ + I +++ Sbjct: 102 KVLICGEKGSKID---QKYIIPLINCKELSALELTEEDSQKLIQGYFSYADEILGYEIVI 158 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQ-FYVSQMLGFIAENYDQALTINDVAEHVKLN 220 + I+ K++ S + + ML FI +NY + +++ D+A+ + Sbjct: 159 RNVLSEILLNIVRENQELLEKSNGSNNTDRERMKYMLTFIHKNYSEDISLGDIAKEAFIG 218 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 A+ F R + + +Y+ RI LL ++ + +I L AGF S S F F + Sbjct: 219 EREALRCFARTIGTSPIEYLQKYRIYTAAELLRKSELPVTEICLQAGFNSPSYFSKVFCR 278 Query: 281 YVGMSPQQYRKLS 293 +GM+P++YRK Sbjct: 279 MLGMTPREYRKNK 291 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 119/292 (40%), Gaps = 16/292 (5%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRA-PHIMPTS-HWHGQVEVNVPFDGDVEYLINNEKVNIN 69 E + P EY E R PH HWH ++E+ G + I+ +K Sbjct: 4 ELKENHPHG-TREYPFCEYHMRYFPHAFQIPVHWHDEMEIIYVRKGPLTVEIDGQKFTGE 62 Query: 70 QGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHV-----THGMVIKS 124 G + + H ++ T F P+ F+S+ L + V H + Sbjct: 63 DGSVFIASPGVLHMMSAPDTPVDYFTFIFPLE-FISFQTKDALEDEVFFPLRNHTRGFRP 121 Query: 125 LATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNS 184 + ++ EL N ++ ++ + L + E + + +R Sbjct: 122 EVADRKLLGKLIPILDELVEENGKMGTHRQIQVRIRLLQMMDLLVEYSQLEELTRNASGE 181 Query: 185 VSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMR 244 + + ++L +I +NY + + +++EH L+ Y +F +T+ QY+ +R Sbjct: 182 LEK-------EILLYIQDNYHDNIGLAELSEHFHLSEKYMSRLFSERFHMTLTQYVNYVR 234 Query: 245 INHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 + + R LL TD S+ +IA+ +G+++ S F F +G SP +YR +R Sbjct: 235 LRYARHLLESTDLSVTEIAMKSGYQNVSYFIRRFSSAMGESPLRYRNGKARR 286 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 111/265 (41%), Gaps = 6/265 (2%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 + +HWH +E+ +G V I +E + + + + +F + H + Sbjct: 26 NTHIPAHWHEAMEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSKLYMFLC 85 Query: 96 FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF-EVRRWQQELNSPNEQIRQLAI 154 ++ + D +L + + + + ++ N N+ + Sbjct: 86 IHVDKKQLSVYCPDLELYHIKCRPVSLDDSKSTPYIHLCQLAHDLTRTNVENKNTSAMRS 145 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 D L++ + + + T+ + + + + +++ ++ E+Y + L++ +VA Sbjct: 146 DGTALLMLADLIRYFSVYSLPGTT-----TGTGQSNDILRKIISYVNEHYTEKLSLEEVA 200 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 V + Y F++ M +T +Y+ +RI+H +L +TDKSI ++ +GF + + F Sbjct: 201 NQVGFSREYFCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTIF 260 Query: 275 YSTFGKYVGMSPQQYRKLSQQRRQT 299 F + GM+P+Q R + + Sbjct: 261 NRLFKEIYGMTPRQARNSYAENTYS 285 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 7/260 (2%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQS 92 + + MP HWH + E+ +G+ I+ EK+ + I + H Sbjct: 28 HSRYNMP-YHWHTECEIIRILEGEFILFIDKEKILAKKNDIIFVHSGIFHGGLPNDCIYE 86 Query: 93 MAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIR-Q 151 +F++ + L + K + + V H VI P V+ S E +R + Sbjct: 87 CIVFDMKLLLKDNNACTKQIYDIVNHNKVIAHKL-----PSNVQALNNCCTSLFEAMRVK 141 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 E + L G ++ + ++ I Y LT+ Sbjct: 142 STGYEFIAQGALYYLIGTILENQLYVKNNKYTKKTKERFLQLKNVITLIENEYQNPLTLE 201 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D+++ ++ Y F ++ T +Y+ RI L T+ SI +IAL GF Sbjct: 202 DLSKASGMSPKYFCRFFHEMINKTPIEYLNYYRIEISCEKLLATELSITEIALNCGFNDV 261 Query: 272 SRFYSTFGKYVGMSPQQYRK 291 S F TF K+ G++P+QY K Sbjct: 262 SYFIKTFKKHKGVTPKQYLK 281 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 110/260 (42%), Gaps = 16/260 (6%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 M SH+H E+ DG+ +++ ++ ++ G + LF H+ I Sbjct: 39 MMKSHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKRIV- 97 Query: 98 LPMHLFLSWPLDKDLINHV--THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID 155 ++ S K+L++ + +GM AT+Q + ++ +P++ + Sbjct: 98 --LYFESSEVASKELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYRRT 155 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 + + L +L++ R + +Q++ +I +Y + +T+ +A+ Sbjct: 156 LLNMFLF--------TMLMHTRRREPEQ---MEETGRTTQIVSYIHSHYQEDITLEQLAQ 204 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 ++ Y F+R T+ QY+ R+ + + L +TDK+I +I+ GF + + F Sbjct: 205 KFYVSQFYLCREFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFN 264 Query: 276 STFGKYVGMSPQQYRKLSQQ 295 F G +P YRK Q Sbjct: 265 RVFKSVTGTTPSGYRKHHQN 284 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 102/265 (38%), Gaps = 11/265 (4%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 I + +M H+H E+ G + IN + + G +T+ H+ + Sbjct: 24 IRRSSSFVMKRPHYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPS 83 Query: 90 CQSM---AIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPN 146 ++ F+ ++ H+ ++ P E R +EL + Sbjct: 84 WEAERFGIYFSRDTVTSFLSLCGREAFGHIFSQP-------KRTIPSEFRPKIEELLAQM 136 Query: 147 EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 + + + L + + +R +++ + V + ++ ++Y + Sbjct: 137 QDEEKQGDSYCQIQLCSLLHQILVVLGRCQEARREGHALEEAEEAMV-RAARYMNQHYQE 195 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 +T+ VA ++ Y F+ L K+Y+ +R+ +L +TD S+ +A+ Sbjct: 196 GVTLGQVAAFANMSPTYFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMAC 255 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRK 291 GF + F F + G+SP++YRK Sbjct: 256 GFSDGNYFGDVFRRLTGVSPREYRK 280 >UniRef50_C6J603 Transcriptional regulator n=5 Tax=Bacilli RepID=C6J603_9BACL Length = 288 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 102/256 (39%), Gaps = 6/256 (2%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH ++E+ G V + E V + +G I F + H + + ++ + Sbjct: 29 PHWHKEIEIIYSRKGKVNIGVREEIVQLEEGEIFFFPSGEAHYFLASPESERY-VYQFNL 87 Query: 101 HLFLSWPL---DKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 LF L + L+N G + Q L+ + + + Sbjct: 88 KLFDERTLRISEDSLLNLFETGEPLSRNWPQGLAQKATELLIHLYEVEQTKPMGMNYLTL 147 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY--VSQMLGFIAENYDQALTINDVAE 215 G + + ++ K S +H + ++Q+ ++ Y + +T+ DVA+ Sbjct: 148 GYLYQLIGEFYLHLPRRQTSNLPSKRSTIQHKETLDLLNQVFEYVENRYREVITLEDVAK 207 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 V + Y F+ T Q++T RIN + +L++ + + ++A AGF S F+ Sbjct: 208 FVGFSPYYFTRFFKANTGQTFMQFLTEYRINQAKFILANENIPMAEVADKAGFASVKTFH 267 Query: 276 STFGKYVGMSPQQYRK 291 F VG SP QYRK Sbjct: 268 HVFKDEVGQSPLQYRK 283 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 110/253 (43%), Gaps = 5/253 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E+ + G + I N+K +++G + H T + I + Sbjct: 37 HWHKEIEIINIYQGTLYVEIENKKFILSKGDSLFINSEEMH-FMKMNTKEECVIISF--- 92 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 +F + D N++ + + ++LS E+ + + + I +++ Sbjct: 93 VFNKSLICGDKGNNIEQKYIDPLINCKELSALELTKEDSKKLAQAYYSYSNNILGYEIIV 152 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQ-FYVSQMLGFIAENYDQALTINDVAEHVKLN 220 + I+ K+S + + + +ML FI +NY + +++ D+A+ + Sbjct: 153 RNILSEILLNIIRKNQKLLEKSSNNSNTDKERIKRMLAFIYKNYSEDISLADIAKEAFIG 212 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 A+ F R + ++ +Y+ RI +L ++++ I +I L GF S S F F + Sbjct: 213 EREALRCFARTIGISPIEYLLKYRIYTAAEMLRNSEQPIAEICLQTGFNSPSYFSKVFCR 272 Query: 281 YVGMSPQQYRKLS 293 +G +P++YRK Sbjct: 273 MLGTTPREYRKNK 285 >UniRef50_B8I274 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I274_CLOCE Length = 276 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 107/251 (42%), Gaps = 9/251 (3%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 H H Q+E+ DG++E +N + +G +++ + + H + M + + Sbjct: 24 PHLHAQLELLYVEDGEIEITVNGCTRLLKKGDLSVSFPNSVHSYNTPPHQERMNCIVVIL 83 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 +L L+ L+ I S + P+ + +E N + I + + Sbjct: 84 NLILAGDFINTLLKFHPKVPFISSDNLHKDVPYAINTLYEEYNYAQSKPVYTPICKAYIQ 143 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 + L ++ N + + ++ +I ENY Q +++ND++ + + Sbjct: 144 IIISRLLQQMELITN---------TDVNYFDIIFDIINYINENYMQPISLNDMSRALGVG 194 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 +Y +F ++++ YI +R++ +L +T+K+I IA GF+S F F K Sbjct: 195 KHYLSRVFSDKIKISFSDYINGIRVSWACNMLLNTNKNITQIAYDCGFQSIRTFNRAFHK 254 Query: 281 YVGMSPQQYRK 291 +SP ++RK Sbjct: 255 ACHVSPSKFRK 265 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 14/257 (5%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIF--- 96 +H H E+ G+ I++ +G + + + H+ T G I Sbjct: 26 GAHVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRTTYNGKGMHERIVISF 85 Query: 97 -NLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQ-LAI 154 N + + + N + G+V + + + E +SP+E + + Sbjct: 86 RNEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALLDKLIFENDSPDELSPAFIKV 145 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 I L+L +E ++ + + ++ +I E+Y L++ VA Sbjct: 146 GLIELLLFIIRCKNYEENVIKEIDV---------DNRIIQEVATYIYEHYADNLSLEYVA 196 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 + L+ +Y F+ K+YI +RI + LL +T+KSI DIA GF S+ F Sbjct: 197 DKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYF 256 Query: 275 YSTFGKYVGMSPQQYRK 291 F K G+SP +YRK Sbjct: 257 GDAFRKAKGISPHKYRK 273 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 8/253 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH +E+N G LIN K+ QG I + H+ +T I P Sbjct: 57 HWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAYETENLVMDVIMFEPSL 116 Query: 102 LFLSWPLDKDLINHVTH-GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 L + D DL+ G V + +RR +E + L ++ Sbjct: 117 LSIDLKFDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLIRSDL--- 173 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 ++ SL+ ++ ++ H+ R + ++L + + D T+ ++++ L+ Sbjct: 174 IRFLSLANRH---LSSPAQEHRPIKGR-GMHALKEVLRTMELHLDYGWTLQELSDLTHLS 229 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 + +FQ+ + + Y+ +R+ H LL TD+ I++IA T GFR+ S F F + Sbjct: 230 PSRFSALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQ 289 Query: 281 YVGMSPQQYRKLS 293 +VG SP + R+ + Sbjct: 290 HVGASPSEIRERA 302 >UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9AXT8_ENTCA Length = 308 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 95/251 (37%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH ++E+ G +E ++N I I L T H + Sbjct: 41 PHWHKEIEILCVHQGQLELVVNGFSRKIKANTIVLIPPNTLHTAYRIAQQSCRFSCIVFS 100 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 ++ + + +I+ T + + + L +Q L Sbjct: 101 EQLITSRQSDRIQSQQIDPFLIQEGVTSYVDFPDKSQQSLTLFQLFDQCFMGKSSYRELR 160 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 LK + +L T + K S R + +L +I NY + + + D+A+ V L+ Sbjct: 161 LKGIVIQLLSHLLEVGTDQPAKKSSERLQEKREKIVLSYIHSNYHEMIQLQDLADSVSLS 220 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 F++ + + Y+ R+ LL +TD +++ IA GF +S+ F F K Sbjct: 221 KEQFTRFFKQSFRTSPMAYLNHYRLIRSAELLRETDLTMVAIAQAVGFCNSNHFSVCFKK 280 Query: 281 YVGMSPQQYRK 291 G +P QYRK Sbjct: 281 MFGETPTQYRK 291 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 101/267 (37%), Gaps = 6/267 (2%) Query: 32 FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ 91 F + HWH +E+ +G ++ IN + ++ QG I + H Sbjct: 20 FNDGYSNTPHHWHEDIEIIYLVEGTLKACINRDTYDLTQGDILIIGGGEIHCFFKEKKFS 79 Query: 92 SMAIFNLPMHL---FLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQ 148 + A+ + FLS D +I + + + L + R E+ + + Sbjct: 80 NRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSI--HLTMGNEIHALMERHINEIINEYSK 137 Query: 149 IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQAL 208 + I L + + ++ + S + + + ++ NY + + Sbjct: 138 AEEGYKLIIKARLYDLAGILIRYM-PKQSYSSEDLSREKERLKKMDSVFQYVDTNYQERI 196 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 ++D+++ + + Y F+ +T Y+ RI + + D++I +IA GF Sbjct: 197 DLDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIEEDETIAEIAYNCGF 256 Query: 269 RSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 S F F VG +P +YR+ ++ Sbjct: 257 NSIKTFNRLFKNIVGCTPMKYRRDNKN 283 >UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=Marinomonas RepID=A6VUH3_MARMS Length = 316 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 119/303 (39%), Gaps = 17/303 (5%) Query: 1 MNTDTFMCSSDEKQTRS------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFD 54 M + ++ + P Y E+ + P HWH ++EV + + Sbjct: 1 MQIYKIETEENGRELTTHGSHDFPCESYDEHFSHFVGGEVPW-----HWHDEIEVVLVIE 55 Query: 55 GDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLIN 114 G + N + G + A T H+LT+ GT + I N+ + + LI Sbjct: 56 GATKVECINSSDIVKTGEMVFINANTLHKLTNYGT-EDCRILNVVFSPKMLGGMGFGLIY 114 Query: 115 HVTHGMVIKSLATQQLSPFEVRRWQQ----ELNSPNEQIRQLAIDEIGLMLKRFSLSGWE 170 VI + + W + EL + ++ D + + W Sbjct: 115 KKHVLPVINNKELLFYKFSGAKAWHEQAINELAAAFNVWKEQGSDR-EFYMNIALMKFWY 173 Query: 171 PILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQR 230 N+ T ++ ++ + + +L FI NY++ ++I D++E ++ + IF+ Sbjct: 174 IFCTNQQDITATHNTAKANEKRIQSLLNFIHSNYEERISIADISEAANISESECYRIFRN 233 Query: 231 VMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + + Y+ R+ LL++++K I DIA +GF S+ F F ++P Q+R Sbjct: 234 ALNCSPNSYLLNYRLRKSVQLLTESNKQIADIAFESGFNCSAYFAKKFKLAFNVTPMQFR 293 Query: 291 KLS 293 K Sbjct: 294 KNY 296 >UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Clostridium difficile RepID=Q184W8_CLOD6 Length = 295 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 115/285 (40%), Gaps = 11/285 (3%) Query: 19 LSLYSEYQRMEIEF------RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 +++Y E ++ EF ++ T HWH ++E+ + +G V IN++ + + +G Sbjct: 1 MAIYLEMPKLIHEFPFRSLSNEGEVLTTPHWHKEIEILLITEGVVNLFINDKPMQLKKGE 60 Query: 73 ITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPL----DKDLINHVTHGMVIKSLATQ 128 I + H + + + + +F + F L + LIN + + Sbjct: 61 IVIIKGGDIHYILPSPGSERL-VFQFDISFFNDLILLNEEKESLINLFSSIKKCSRDWSA 119 Query: 129 QLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 ++ N +I + G M + + + + S+ Sbjct: 120 KIRKSVFDILIDIYNEDLYKIEGYSYAIKGKMYNLIPILYRQIPREIEENTVEYEINSKE 179 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 ++ + ++ +NY Q + + DV+ V + Y F++ T ++ R+ Sbjct: 180 ILERLNNIFKYVEKNYKQPIKLEDVSYEVGFSVYYFTKFFKKNTGKTFITFLNEYRLEKA 239 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 + +L + + SI+D+ GF S+ FY F + +G+SP +++K Sbjct: 240 KWILLNNNISIVDLVEEVGFGSTKTFYRVFKEKIGVSPLEFKKRY 284 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 104/261 (39%), Gaps = 7/261 (2%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNL 98 H H +E+ G +Y I + ++++G I + HQ T F + Sbjct: 30 ARYHSHDFIEMAFILSGHGKYKIADRLYDVSEGDIIILNPGQKHQALCTDPSNPATEFFV 89 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF--EVRRWQQELNSPNEQIRQLAIDE 156 + ++ + + + E+R+ ++ + + Sbjct: 90 GLCDVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAMSVENDVCRSG 149 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNS----VSRHAQFYVSQMLGFIAENYDQALTIND 212 +MLK + + +L ++ N+ S ++ V Q++ + ++Y + ++++ Sbjct: 150 RYIMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFEDHYSEKISLDQ 209 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT-DKSILDIALTAGFRSS 271 +AE++ L+ Y IF+ T +++ +R+ + LL + D SI ++A G+ Sbjct: 210 IAENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQEVAAKVGYDDV 269 Query: 272 SRFYSTFGKYVGMSPQQYRKL 292 F F K GM P + R+L Sbjct: 270 YHFSKLFKKRFGMPPSKIRRL 290 >UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFB6_9CLOT Length = 323 Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 61/331 (18%), Positives = 124/331 (37%), Gaps = 48/331 (14%) Query: 3 TDTFMCSSDEKQTRS------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGD 56 M ++ K+ R+ P++LY E E+ HWH ++E GD Sbjct: 2 KKQEMANTLLKENRTHGTVQYPVALY--EWNGENEWHV-----VPHWHEEMEWIYFQKGD 54 Query: 57 VEYLINNEKVNINQGHITLFWACTPHQLT-DTGTCQSMAIFNLPMHLFLSWPLDK-DLIN 114 IN ++ ++ H L + +S +F + + F + + ++ Sbjct: 55 FPVWINTKEYQVHAPAFMCIHPEELHALILEKDGIESAVVFPVDILCFERYDAAEAKVLG 114 Query: 115 HVTHGMVIKSLATQQLSP--FEVRRWQQELNSPNEQIRQ--------------------- 151 + G + + Q E+ +E+ Q+++ Sbjct: 115 PLAEGKLRMPVLCQSGDAAFEELSACYKEIEQVLRQMKEHDTKKVQHLDSSITRENVAGE 174 Query: 152 --------LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAEN 203 + I + ++ L + R + + ++L +I E+ Sbjct: 175 PKQNLQKNMLYLNIKAKMLELIAVAYKYDLFTRQVREDREESGTVEN--LKKVLQYIGEH 232 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 Y + ++++AE V +N Y F++ + T+ +YI +R+ L++T+ I+DIA Sbjct: 233 YGSPIRLSELAELVNMNEQYFCRYFKKNIGKTITEYINVIRVEKAATALAETEDKIIDIA 292 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 GF + F F K GM+P +YRK S+ Sbjct: 293 SACGFDNIGYFIRRFKKEKGMTPSEYRKKSK 323 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 10/257 (3%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSM-AIFNLP 99 +HWH ++E+ + G+ IN + G I L + + H + S Sbjct: 35 AHWHNEIELILVLSGEFNLKINTDSYTCKDGDIILINSGSLHYFSTKENESSTWNSIVFN 94 Query: 100 MHLFLSWPLDK---DLINHVTHGMVIKSLATQQLSPFEVRR---WQQELNSPNEQIRQLA 153 M S LD + I + + + + S +++ N + Sbjct: 95 MDQLNSNILDNCSVNFITPIINNEFKLPVIIHKDSLINNELKCIILNIIDTYNSKYYGFE 154 Query: 154 IDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDV 213 ++ L+ K FSL ++ KT+ T N + +L +I ENY++ + IN + Sbjct: 155 LEIKSLIFKYFSLLFKFNLVKKKTNNTCLNE---EKIEKIKIVLEYIQENYNKEIDINRL 211 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 + N ++ M F++ T Q+I R+ +L+S+TD SI +I+L GF + S Sbjct: 212 SAICHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKAASLISNTDLSITEISLEVGFTNISY 271 Query: 274 FYSTFGKYVGMSPQQYR 290 F +F + +P+ ++ Sbjct: 272 FIRSFKEKYNTTPKGFK 288 >UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG17_9FIRM Length = 317 Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 111/266 (41%), Gaps = 10/266 (3%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH--QLTDTGTCQSM 93 + SHWH VE+ G ++Y +N E + + + + + H C + Sbjct: 34 NYTAVSHWHEDVEIIYVLSGTMQYDVNGENITLYENEGIVVNSRNFHFGYSDKKEECGFI 93 Query: 94 AIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLA 153 P L + + + + T I L + ++WQ EL + L Sbjct: 94 CFIIHPSVLSGNPYIRERYVRPFTECQAIPFLHLRPD-----KKWQNELLEVLWTVFHLN 148 Query: 154 ID--EIGLMLKRFSLSGWEPILVNKTSR-THKNSVSRHAQFYVSQMLGFIAENYDQALTI 210 D E L+ + + + N + K+ + + + +M+G+I ++Y ++ + Sbjct: 149 QDAPEFYLLCQEAVFRIFTLLYTNNMELLSEKSEKADISLIQLRKMVGYIQKHYQDSIML 208 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 +D+A+ ++ IF++ M + Y+ R+ LL++T I +IA +GF + Sbjct: 209 DDIAKIGEMGKTACCNIFKKYMNTSPIDYVITYRLAQSTVLLTETRLPITEIAYGSGFHN 268 Query: 271 SSRFYSTFGKYVGMSPQQYRKLSQQR 296 +S + +F K G +P Q RK ++ Sbjct: 269 ASYYTKSFRKQYGKTPGQMRKEYLKQ 294 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 105/260 (40%), Gaps = 5/260 (1%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 HWH +VE G + Y NN + + G + H + C S Sbjct: 38 GYSFGCHWHPEVEFTYILSGSMIYQANNTQHLVKAGDVIFVNQNCLHSGKASNDC-SCRY 96 Query: 96 FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID 155 F + + L + + G +I S + ++ +++ S ++ +L + Sbjct: 97 FAITFNPTLISGYKSSIFENKYIGEIINSDRIPFVYFEGSKKENEQIVSLLMRLEELYRE 156 Query: 156 E---IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY-VSQMLGFIAENYDQALTIN 211 + L+++ W + + + + + + L +I +NY + LT++ Sbjct: 157 KAEGYELLIESKLFELWFYLYRDVYCKVPDELIKQTKNIMQIKAALDYIHDNYKENLTLD 216 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D++E L+ + +F++++ T Y+ + RI L +I + AL+ GF SS Sbjct: 217 DISEACNLSKSSCCRLFKKIVHGTPFNYLLSYRIQRSIPYLLSEGMNITEAALSVGFSSS 276 Query: 272 SRFYSTFGKYVGMSPQQYRK 291 S + F KY+ +P +Y+ Sbjct: 277 SYYSEIFKKYMKCTPTEYKN 296 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 99/258 (38%), Gaps = 9/258 (3%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 MP H H E+ +G+ Y +++ + +G + + H + + Sbjct: 29 MPRPHEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHDLHSTASSEKLLFERVLI 88 Query: 98 LPMHLFLSWPLD--KDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID 155 F+ +L++H T ++ L Q + E + L Sbjct: 89 GFSRTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSMLAECQTEQTHYSSLVRS 148 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 + +L R + T ++ + +S++ +I N+ + LT+ VA+ Sbjct: 149 LMNELLIRLHR-------IETTLQSQTHEYEHPMHQKISEIAQYIKSNFHEKLTLEQVAK 201 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 ++ +Y +F R+ ++Y+ +RI + +L + S+ I+ AGF + F Sbjct: 202 QFYISPSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELAGFEHIAHFN 261 Query: 276 STFGKYVGMSPQQYRKLS 293 TF K G +P QYRK Sbjct: 262 KTFKKIAGTTPLQYRKRH 279 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 109/256 (42%), Gaps = 8/256 (3%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH E+ +P + ++ +++G I + H+L + + I L Sbjct: 33 PHWHTPFELIMPTESGYSVHCGEKEYVLDEGDIIIICPGVIHELFSPP--KGVRIIFLVS 90 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 + +I+ ++ ++I Q+ ++ R E+ +E R L E + Sbjct: 91 LAQIDLQELDLVISMISPAILISPEKFPQIHA-QIHRLMLEIR--DEYFRNLPYTESSIY 147 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ---MLGFIAENYDQALTINDVAEHV 217 K + + ++ + + + Q Y+ + + +I E+Y + L++ +VA Sbjct: 148 AKFLEILVLVGRCYAEIAQHNFEAKNNKQQEYMEKFLFICNYINEHYAEPLSLEEVASLA 207 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 + + +F++ T +Y+ RI H + LL D + S+LDI+L GF + S F Sbjct: 208 GFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLLVDKNLSVLDISLQCGFSNLSSFLRM 267 Query: 278 FGKYVGMSPQQYRKLS 293 F K G +P + RK+ Sbjct: 268 FRKLTGFTPTELRKMY 283 >UniRef50_A6CWX4 Transcriptional regulator, AraC family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CWX4_9VIBR Length = 316 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 62/281 (22%), Positives = 105/281 (37%), Gaps = 25/281 (8%) Query: 16 RSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITL 75 R P+++++ R +HWH E G ++ + G + Sbjct: 29 REPVNVFAADVR----------QCEAHWHAAAEFICILKGSFAIGVDGNSKTYHSGGMVF 78 Query: 76 FWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEV 135 H L + LF + L V+ +KS Q V Sbjct: 79 LAPNKIHSLQSKTANSRLLTVQFSPLLF------QQLTGDVSFNYGVKSFEHQSEKDRSV 132 Query: 136 RRWQQELNSPNEQIRQL---AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY 192 W L+ +E + L + + L+ + + ++N T +NSV + Sbjct: 133 --WDAMLDLASEYVTDLDTISFSHMSLIYRLLANIERVSEVINLT----QNSVRDNDDEL 186 Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + L +I +Y + LT+ D+AE L+ +Y +F+RV K Y+T +R++ LL Sbjct: 187 IKTCLTYIDSHYMEPLTLTDIAERSGLSYHYVSRMFKRVCGFNFKDYLTFIRVSKALPLL 246 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 DT I DIA GF + F KY +P +RK Sbjct: 247 CDTTFPITDIAHKCGFSEHKLLIAAFRKYYDQTPTAFRKKY 287 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 10/262 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG-TCQSMAIFNLPM 100 HWH + E V G V + +E+ + G + L H + G + Sbjct: 82 HWHSEAEFIVVTRGSVCLQVGSERHVLADGDVALLSGGELHSMAAPGKGPSECKAIVFGL 141 Query: 101 HLFLSWPLDK---DLINHVTHGMVIKSLATQQLSP---FEVRRWQQELNSPNEQIRQLAI 154 L D+ ++ + G ++ A P + R + + + EQ + Sbjct: 142 DLLEGPSSDRVQQSYLSPLASGKLLLPGAIAHDHPVRQYLAARLCEIVEALEEQPVGYEL 201 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 G + + +LV + R + + +L +I + L + D+A Sbjct: 202 AVKGCLYDVLAQLFRAELLVEHSPR---REMDDRRADTLKAVLTYIDAHLSDKLRLADLA 258 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 ++ + F+ + QY+ R+ LL D ++SI I + GF S F Sbjct: 259 RVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAADLLKDPNRSITAIGMDLGFHDVSYF 318 Query: 275 YSTFGKYVGMSPQQYRKLSQQR 296 F Y +P YRK ++ Sbjct: 319 IKVFRSYKHCTPLAYRKALLKK 340 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 113/294 (38%), Gaps = 18/294 (6%) Query: 6 FMCSSDEKQTRS------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEY 59 + ++ ++ P++ Y+E + HWH + E + G + Sbjct: 44 VVADAEGREMVQHGSALFPIACYAENLK--------SYSVAWHWHEEFEYILAMKGPLTV 95 Query: 60 LINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHG 119 +N +V + + H + +++ + H L +D + Sbjct: 96 DVNKTRVTLQTNQGVFLNSGILHAVEQAEKGEALL-HSGVFHPRLVGGMDTIFWQKLIRP 154 Query: 120 MVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLK-RFSLSGWEPILVNKTS 178 M+ L V Q L E + +A++ + R+ LS +L + Sbjct: 155 MLQPDAPAFFLLDEAVPWQAQVLACLREAWQAVAVEPFDYENRVRYYLSAALRLLSTQCV 214 Query: 179 --RTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 +T + + A + QML F+ E+Y + LT+ +A V L+ + + F++++ +T Sbjct: 215 GGKTKVSQQEQIAAERMKQMLRFVEEHYAEELTVERIAASVALSESACLRSFRQMLGITP 274 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 QY+ R+ LL T +I + GF S F TF + +P++YR Sbjct: 275 IQYVKQFRVEKAAELLRSTRLKTGEIGMECGFADGSYFIKTFREIKHCTPKEYR 328 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 113/296 (38%), Gaps = 23/296 (7%) Query: 6 FMCSSDEKQTRS------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEY 59 + + ++ P++ Y+E HWH + E + G + Sbjct: 23 VVADAAGREQTQHGSPLFPIACYAEDLSC--------FSVAWHWHEEFEFILAALGPIHV 74 Query: 60 LINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA--IFNLPMHLFLSWPLDKDLINHVT 117 +N ++ + G + H + + +F + + + LI + Sbjct: 75 DVNKTRLTLQTGQGVFINSGALHAVEPAEGRALLHSGVFQPRLVGGMDTVFWQKLIRPLL 134 Query: 118 HGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLK-RFSLSGWEPILVNK 176 + P++ +Q L E + +A + + R+ L+ +L+ + Sbjct: 135 QPGTPPFFLLDEAVPWQ----RQVLLCLREAWKGVADEPFDYENRVRYHLTAALRLLITQ 190 Query: 177 --TSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQL 234 + + + + A + QML ++ E+Y + LT+ +A V L+ + + F++ + + Sbjct: 191 CVSGKVKVSEQEQIASERMKQMLRYVEEHYAEELTVEKLAGCVALSESACLRSFRQFLGI 250 Query: 235 TMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 T QY+ R+ LL T ++ L GF +S F TF + +P++YR Sbjct: 251 TPIQYVKQFRVEKAAELLRSTRLKTGEVGLECGFSDASYFIKTFREIKHCTPREYR 306 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 97/254 (38%), Gaps = 4/254 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNL--- 98 HWH E+ G+V Y I + G + + H + ++ L Sbjct: 34 HWHEHFELIYVESGEVLYTIGGQPFPTKPGDMLFVNSGELHSAASLNPNEPFTVYALVFN 93 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 P L L P DL+ T+GM + + +Q Q L E ++ E+ Sbjct: 94 PSILGLKEPHIVDLVAPYTNGMSMIASRIEQTDSLYPLLKQTTLRLAGEFEQKPRGYELA 153 Query: 159 LMLKRFSLSGWEPILVNKTSRTH-KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 + L W R+ + + R ++L + + + +T+ A V Sbjct: 154 VRSYCQLLFTWLSREFTVMQRSDTEMNAFRARTNRFKELLTRLESDVAERVTVEQAASFV 213 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 ++ + +F+++ T QY+ RIN LL +T S+ DIA G S + F Sbjct: 214 HMSPYHFCRMFKKITGQTFVQYMNLNRINRAEYLLKNTAMSVTDIAAEIGCSSINSFSKL 273 Query: 278 FGKYVGMSPQQYRK 291 F + G+SP+ RK Sbjct: 274 FRQLRGVSPRDLRK 287 >UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=Firmicutes RepID=B8DFE8_LISMH Length = 292 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 112/269 (41%), Gaps = 15/269 (5%) Query: 34 APHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSM 93 ++ HWH ++E+ G + +N+ + + +G I + H + + + Sbjct: 22 EGEVLVYPHWHKEIEIIYALKGSLNLGVNDMPIQLKEGEIQVINGGDVHYFLASPSSER- 80 Query: 94 AIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQ----- 148 + + LF D + + + + +++ V + Q + + +E+ Sbjct: 81 VVIQFDLSLFQEEMQMDDQMQTLREMLTEMAHLSREWPEETVAKMQSLIMNIHEESSGEK 140 Query: 149 ------IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 ++ + IGL+ + +P V K+ + H + Q+ ++ + Sbjct: 141 PGKHYILKADLLAIIGLIYREIPQIKTQPDSVISEEAVLKSQETLHK---LDQIFSYVEK 197 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 +Y + +++ +VA + + Y F+R +T ++ R+N + +L + + ++ Sbjct: 198 HYQEPVSLQEVANYTGFSTYYFTKFFKRNTGMTFVTFLNDYRLNKAKWMLLNEAFPVTEV 257 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 A AGF S F+ F + +G++P +YRK Sbjct: 258 AELAGFSSVKTFHHAFKRAMGVAPLKYRK 286 >UniRef50_C0D9W5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9W5_9CLOT Length = 316 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 124/300 (41%), Gaps = 24/300 (8%) Query: 6 FMCSSDEKQTRS--------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDV 57 F+ S++EKQ P+S+Y+++ R + A +P HWHG+++V +G + Sbjct: 15 FVISTNEKQQEEVRFLSGDFPVSVYTQHYR----YAASDYVPL-HWHGELQVLWIAEGAL 69 Query: 58 EYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVT 117 EY +N + + L H G N +F + ++ + Sbjct: 70 EYSVNGRHFVLGPDKLLLVNRRQLHGSRTMGGDSRTLCINFTPDIFHPLIRENYVLPLLQ 129 Query: 118 HGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKT 177 SL L P++ + + LN E ++ ++ F +E IL + Sbjct: 130 SDSFTHSLLL--LLPYQTEKLKTFLNWKCEPLQYFSVI-------NFLSLVFEDIL--GS 178 Query: 178 SRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMK 237 S KN + + M+ F+ +Y + LT+ ++ + N N +F++ L+ Sbjct: 179 SENTKNPQNYEEIKLIQTMIRFVQTHYAEPLTVRQISAYAITNKNRCTALFRKYTGLSPI 238 Query: 238 QYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 +Y+ R+ + ++ +DK I +I+ G+ S F F G+ P +YR +R+ Sbjct: 239 KYLNEYRLYTAKNMIVSSDKPISEISSDVGYNQISYFIEQFRGSYGLPPLKYRNQFGRRQ 298 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 99/257 (38%), Gaps = 11/257 (4%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 +HWH ++E+ G +N E + + G + + H + + Sbjct: 29 NHWHDEMELIYIESGSGLVRLNKEILRVKAGDLIIVNRGVLHGIKTDLKNILYFRSIVFD 88 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE------VRRWQQELNSPNEQIRQLAI 154 FLS P V ++ + + ++S +++ + Sbjct: 89 LNFLSGPAGDLCQERVISLLMDNQAEFTHIISRSDDNYGNICLLFDRIHSCHKEKKPYYF 148 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 ++ + F + + S++ + ++L +I NY Q LT ++ Sbjct: 149 VKLKALFFSFFYEMLMGNYITPADKDENKSLAS-----IKKILDYINLNYSQPLTAAELT 203 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 + Y M +F++ T+ YI +RI + +L +D S+ +IAL GF ++S F Sbjct: 204 ALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSDSSVTEIALEVGFNNTSYF 263 Query: 275 YSTFGKYVGMSPQQYRK 291 F + GMSP ++R+ Sbjct: 264 IKKFQQATGMSPHKFRR 280 >UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME6_9FIRM Length = 323 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 115/287 (40%), Gaps = 25/287 (8%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 +++ ++ MP+ H H + E+ G Y + +N G + + Sbjct: 46 QTDFFIERLDRDKGPDMPSFHIHHKFEIYYEIAGTCRYFVEGAAYIVNAGSVVMIGENQI 105 Query: 82 HQLTDTGTCQSMAIFN-------------LPMHLFLSWPLDKDLINHVTHGMVIKSLATQ 128 H+ G S I P F S+ D+ NH+ + +K Sbjct: 106 HKTASLGDSPSSRIVVNFSREYLEKVAAAFPEVDFFSFLTDER--NHLLSAITVKQQNHI 163 Query: 129 QLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 Q ++ + E + ++ +R + + L + + K VS H Sbjct: 164 QSILQQMLDLEGETSPEDQALRAMLL-------ATLLLELKALCVQQQCQGGEKGRVSNH 216 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 V Q+ +IA++Y + LT+ +A ++ Y +F++ L++ +YI +RI Sbjct: 217 ---IVEQIQAYIAQHYAEKLTLTGIASQFYISPYYLSRLFKKSTNLSLIEYINGVRIKAA 273 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 + L+ + +SI +A GF +++ F F G+SPQQYR+ ++ Sbjct: 274 QNLIEKSGESISSVAGQTGFMTTAHFRRVFKDATGLSPQQYRQQYKR 320 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 112/257 (43%), Gaps = 4/257 (1%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH ++E+ +G ++ I+ + +G + + HQ+ + I + Sbjct: 26 PHWHDEIEIVKVLEGKIKVSISESVCFLEKGEMAIIKHKEIHQIQSLENESLLQIIQINY 85 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 + I+ + + I ++ + + +N + + + I + Sbjct: 86 KFMETHFPHLSRISFENNLLNISKDINLNVASNLKQLINEMINYLSVRNQGYEFHVISAI 145 Query: 161 LKRF-SLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 K F S+ P ++ KN+++ + + +++ +I +NY + IN +AE + L Sbjct: 146 YKVFGSIISNVPYTISTEDELEKNNITFN---RMKKIIEYIEQNYMNEININTLAEILHL 202 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 N Y F++ L++ QYIT +R+N LL + SI +I L+ GF++ FY F Sbjct: 203 NKYYIAHFFKKHTGLSLGQYITNLRMNKATELLIKNEDSITNIILSCGFKNIKYFYKVFR 262 Query: 280 KYVGMSPQQYRKLSQQR 296 + SP +Y+ Q+R Sbjct: 263 EVYKCSPLEYKNNRQER 279 >UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH72_9FIRM Length = 294 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 6/263 (2%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT--GTCQSM 93 HWH +E DG ++Y IN ++ I QG + + H C + Sbjct: 35 GYEALCHWHPDLEFIYIIDGAMDYFINGNRIPIRQGQVIFVNSRRLHYGFSRQKEECTFI 94 Query: 94 AIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLA 153 A+ P LF + + G ++ + ++ +I + Sbjct: 95 ALVVHP-SLFTNSFDKAWIFAEQKFGFANVDYILLDSHISWQKKMIEGIDRIYREINAAS 153 Query: 154 IDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDV 213 + + L+ + S+ + + K++V+ Q M +I NY + LT++ + Sbjct: 154 FNPLRLLAEAISICADAGEHIETMESSGKHNVT---QMAFLNMTEYIQNNYREKLTLDKI 210 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 A + + + +F++ ++++ Y+T R++ LL DT+ S+ +IA GF+S S Sbjct: 211 AGAGAVCRSKSCQLFRQYVRMSPVAYLTKYRLSKSAELLRDTELSVSEIASLCGFQSPSY 270 Query: 274 FYSTFGKYVGMSPQQYRKLSQQR 296 + + F K G +P YRK S+ + Sbjct: 271 YINLFKKETGQTPLNYRKASEIK 293 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 103/258 (39%), Gaps = 14/258 (5%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 M SH+H E+ +G+ ++I E ++ LF H I Sbjct: 27 MTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPFKRIVL 86 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 ++ L++ V + Q+ + E++ P + +++ Sbjct: 87 YFSPDLIANDTICQLLSEKELLFVNEGYIPNQILSLLL-SLTHEIDVPGKYHDAYICNQL 145 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 +L +E +V + ++ + +I +Y + +++N +AE + Sbjct: 146 NGLLLNMLRLDFE-------------AVKSIPKTRSAKAVDYIHNHYMEDISVNQLAEIL 192 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 ++ + F+ T+ QY+ RI H + L+ +TD +I I+ GF + + F T Sbjct: 193 YVSPYHLCHEFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRT 252 Query: 278 FGKYVGMSPQQYRKLSQQ 295 F K G++P++ +KL Q+ Sbjct: 253 FKKITGVAPREKKKLYQK 270 >UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4Y3_9CLOT Length = 291 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 102/259 (39%), Gaps = 11/259 (4%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP 99 + H H E++ G Y N + + G I L+ H + + + + Sbjct: 33 SEHKHTAFEISCILSGSGLYKTQNALYHFHAGDIFLYSTNEIHYIIEIFDNCDILNLHFE 92 Query: 100 MHLFLSWP---LDKDLIN-HVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID 155 S D +N HG ++ Q +R+ E+ + + Sbjct: 93 PRFIWSPGNDLFDSKYLNIFFNHGDSFENCLEQDEDTARIRQLLLEIEKEFNE----KLP 148 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV---SQMLGFIAENYDQALTIND 212 + LM+K L+ + N + ++S+ ++ + L +I +N + +N Sbjct: 149 DYELMVKVKVLTILVTLGRNFNFSIPQKALSQSRSQHLLQLDKALAYIDDNISSDIDLNT 208 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 +A+ ++ +Y IF+ + LT +YI R+ L+ TD SILDIA GF +++ Sbjct: 209 IAKTAHMSRSYFSTIFKEMNGLTPWEYIINKRVELAAHYLTSTDFSILDIACKCGFNNTA 268 Query: 273 RFYSTFGKYVGMSPQQYRK 291 F F K SP +RK Sbjct: 269 NFNHAFKKVTRKSPSDFRK 287 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 106/277 (38%), Gaps = 10/277 (3%) Query: 23 SEYQRMEIEFRAPHI-MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 ++ ++ R P+ M +H H E+ G + +N+ N+++G + L Sbjct: 4 NQDLKITRIKRDPYFSMKDAHLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGAL 63 Query: 82 HQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE 141 H+ T I FL + L V+K + + + RR E Sbjct: 64 HRTTYISGGSHERICITFSKSFL-----QPLFQEFGEEAVLKCFSQPYVRIPQSRREYFE 118 Query: 142 LNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVS----RHAQFYVSQML 197 + D L L + ++ S + ++ ++ + + Sbjct: 119 DLISKAHREMMYQDTYSLYLASSHVYELILFILRLNSISKQDDITPYDASPDDQIMEKAA 178 Query: 198 GFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDK 257 +I NY +T+ + A + ++ Y F+ V K+Y+ ++RI LL T Sbjct: 179 KYICSNYQSPVTLEETAAYCNMSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKL 238 Query: 258 SILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 I +IAL +GF S+ F F + G+SP +YRK + Sbjct: 239 PITEIALLSGFNDSNYFGDVFKRMKGISPCKYRKNKE 275 >UniRef50_B9Y348 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y348_9FIRM Length = 297 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 7/263 (2%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG--TCQS 92 P+ +HWH +E V G + Y ++ E + +N G + A H C Sbjct: 36 PNYTALNHWHEDLEFIVVHSGSMSYNVSGEILTLNSGEGLIVNARQMHYGFSPDRTECTF 95 Query: 93 MAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQL 152 + + P L ++LI+ + + + P WQ+E+ I Sbjct: 96 LCLLLHPQLLCPLPSFKRNLIDPLIENTAAPFVFLRPEIP-----WQKEIRDHILAIEAG 150 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 A + ++ +LV V + M+G I + Q LT+ Sbjct: 151 ADTHSAPLQALSRMAAIGALLVENLPPAVVTDVENPDLRCLKVMVGTIHLRFAQKLTLAQ 210 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 +A + + +F R + T Y+ R+ LL +T S+ +IAL GF S+S Sbjct: 211 IAASGAVGQSKCCKLFMRFLNQTPMAYVNQYRLYQSLELLRNTAMSVTEIALAVGFGSAS 270 Query: 273 RFYSTFGKYVGMSPQQYRKLSQQ 295 + F K SP QYRK + Sbjct: 271 YYAEAFRKGFDQSPTQYRKEHNR 293 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 97/292 (33%), Gaps = 12/292 (4%) Query: 4 DTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINN 63 T + P+ + R E + R ++ HWH +E+ G+ + Sbjct: 3 KTLREPMTMPDPQFPIKV----HRCEFDGR-GQVLFNHHWHEHLEILYFVSGEATLECGS 57 Query: 64 EKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDK---DLINHVTHGM 120 +G + + H L S LD I +T Sbjct: 58 TTFTAKEGDMIVINRNELHYGLSQSDHLFYYALIADFSLLQSHSLDAPEMKFITPITQNR 117 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 +I + E +LAI L L G+ ++ + Sbjct: 118 LIFENRISGADALAPMLSIIKELERQEFGYELAIKSELYRLLTLLLRGYVATVLTQDEYV 177 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 + + + +I E+Y + L++ ++ L+ + +F+ + T+ +Y+ Sbjct: 178 ERM----KNVERFAPIFKYIEEHYREDLSVEQLSGMAGLSRFHFSRLFKEISGRTVTEYV 233 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 R+N LL ++ ++ +IA GF F TF KY M+P RK Sbjct: 234 NETRLNRADYLLRESPLTVSEIAAATGFNDIYYFSRTFKKYKRMAPSALRKK 285 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 3/249 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E+ +G + I+NE G + H + P+ Sbjct: 35 HWHDELEIIYIRNGSINITIDNELFTGTGGSFFIVNPGELHYMGSNDLNADYYTILFPLE 94 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 F+S+ + + N + M + P+ E+ S E++ + E G Sbjct: 95 -FISFQSNDYVENMLFKPMRSSHVILTHSLPYS--EIYAEIISLLEKLIYINKYEKGFYQ 151 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNA 221 + E + + + +A +++ ++ +NY + +T++D+A+ ++ Sbjct: 152 LDCKILLLEILSNILSIPDILVKKTSNASDMRREIITYVNDNYLEKITLSDLADEFHMSE 211 Query: 222 NYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKY 281 Y F++ +T +Y+ MR+ + + LL T+ SI D+AL++GF + S F +F + Sbjct: 212 KYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNISITDVALSSGFPNVSYFIRSFKES 271 Query: 282 VGMSPQQYR 290 G +P YR Sbjct: 272 YGKTPFSYR 280 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 95/267 (35%), Gaps = 9/267 (3%) Query: 27 RMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD 86 + EF M SHWH E + G + IN+ + G I H+ T Sbjct: 9 KRSYEFH----MAESHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTY 64 Query: 87 TGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPN 146 + + + +L + +V + + + V + + Sbjct: 65 HSSPVNERVTISFDGEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRI---- 120 Query: 147 EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 + + D ++K+ L + + + +I ++Y Sbjct: 121 -EYEETGQDGFSPLMKKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQN 179 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 +T+ +VAE ++ Y F+ V K+Y+T +RI LL + S+ +IA Sbjct: 180 PITLEEVAELSHMSPAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRC 239 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRKLS 293 GF + F F K G+SP+ +RK+ Sbjct: 240 GFGDGNYFGDAFRKAKGVSPRAFRKMQ 266 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 9/253 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH + E G+V I +++ +++G + H+ I N Sbjct: 47 HWHREFEFLYVESGEVTCGIGEKQIILSEGEAIFINSKILHRFYAPSGG---IIPNFVCM 103 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 P + + ++ ++ Q+ E+ WQ ++ +I ++ +E L Sbjct: 104 PEFIAPENSLIYKKYILPIISSNIYFQRFQTDEL--WQTKIIQTMIKIMEIQGNEKIREL 161 Query: 162 KRFSL--SGWEPILVN--KTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 +L W N + + +V AQ V ++ +I ENY+ L+++++A H+ Sbjct: 162 ATLALMQDLWLTFYENVKLSDKGDVQTVDEVAQKRVQLIMQYIHENYNHNLSLDEIASHI 221 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 ++ + A+ +F R + T Y+ R+ LL +T+K + IA +GF + F Sbjct: 222 GISKSTALNLFHRFLHTTPVNYLIGYRLQAASWLLKNTNKKVKTIAYESGFHNVDYFCRL 281 Query: 278 FGKYVGMSPQQYR 290 F K ++P +YR Sbjct: 282 FKKRYHLTPSEYR 294 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 106/271 (39%), Gaps = 23/271 (8%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 M SH+H E+ G ++ ++ +N G LF H Sbjct: 19 MAKSHYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSF----- 73 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID-E 156 K L+ + T M+ T L E N + +R L + E Sbjct: 74 ------------KRLVLYFTKEMIAVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQE 121 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 +L ++ R + Q ++ ++ ++ ENY +T+N++AE Sbjct: 122 FNDNYSEEALYFILNQILILLLRNSTETAKPEKQSRITSIIHYLHENYTYPITLNELAEQ 181 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 L+ Y F++ T+ QYI ++R+ H + L +TDKS+ +I+ GF + + F Sbjct: 182 FYLSPYYLCREFKKYTNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNR 241 Query: 277 TFGKYVGMSPQQYRKLSQQR-----RQTFPG 302 + G+SP + RK +++R R PG Sbjct: 242 VYRSVTGLSPSKSRKQAKERSAAMERHGIPG 272 >UniRef50_UPI0001789626 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789626 Length = 305 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 109/276 (39%), Gaps = 10/276 (3%) Query: 19 LSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLIN----NEKVNINQGHIT 74 Y+ Y + + + P+ H H E+ G + + V + +G Sbjct: 17 PRFYAYYYKQWMNYEMPY-----HQHDSTEIMYMISGVCRIDVKAGDTEKSVILKKGEFM 71 Query: 75 LFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE 134 + A PH+L S + N+ S + L + V + L + Sbjct: 72 VLDAGVPHRLI-VDQAASCRMLNVEFGFMESEGMAPSLRHIVGEEEEVSFLLKRPFRYLV 130 Query: 135 VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVS 194 + ++ + +L + +L + + + + S + + FY+ Sbjct: 131 LADQEEVYPVLKSLVLELDQRGTDGRMMTHALFIQLLVCIARLYEERERSDMQQSDFYIK 190 Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 + + ++ +NYD+ + + DVA V L+ Y +F+R T+ +Y+T +R+ + LL Sbjct: 191 RSVDYLHQNYDRQIQVKDVAAEVNLHPGYLHRVFRRGTGRTITEYLTTIRMEKAKMLLEQ 250 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 TD I +I+ G S F+ F KY G +P +YR Sbjct: 251 TDIPIHEISDYVGVGSRQYFHMLFKKYTGSTPVEYR 286 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 98/262 (37%), Gaps = 19/262 (7%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ--LTDTGTCQSMAIFNLP 99 HWH ++E+ +G + Y +N + +G + H + + C+ + P Sbjct: 42 HWHPELEIACILEGTMTYQVNQNLYQLGKGDCLFVNSNALHSGCMFENNDCKYIVATFNP 101 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVR------RWQQELNSPNEQIRQLA 153 L + +K + + L T + F R Q++ Sbjct: 102 S---LIYGYEK---SDIDTNYTFPLLNTDNFTSFVFRDGADGNETFQKIMKEMAAFYTEE 155 Query: 154 IDEIGLMLKRFSLSGWEPILVNKTSRTHKNS----VSRHAQFYVSQMLGFIAENYDQALT 209 L +K W +L + R+ S + + FI +Y +T Sbjct: 156 NACYELHIKSRLCELW-ALLFEEFQRSQLPSGAGLAEAKQISRLKNAIIFIHSSYTDPIT 214 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++ +AE + + IF++ + T +Y+ RI LL SI +IA GF Sbjct: 215 LDQMAESCHTSKSEFCRIFKKTLHQTPFEYLLRYRIQKSLPLLVTDTCSITEIASQVGFS 274 Query: 270 SSSRFYSTFGKYVGMSPQQYRK 291 SS + F KY+G SP++Y+K Sbjct: 275 GSSYYSEVFRKYMGCSPREYKK 296 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 105/268 (39%), Gaps = 12/268 (4%) Query: 31 EFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTC 90 E A M H+H E+ G+ LIN+ ++ G L H+ Sbjct: 19 ERDADFHMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMHRFVYDCNS 78 Query: 91 ---QSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 + F + L KD++ H+ H V+ + Q + + + + Sbjct: 79 TVKRYNLFFTMDFAASLFHSDTKDILEHLFHYPVLHLTSLLQGNATRLFDTLYQETVGQD 138 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 Q I ++ + + I + A+ + +I+ ++ + Sbjct: 139 SCSQAVIPAYISLILSLLVRNRDHIQLQDLDS---------AENAIQASARYISTHFQEP 189 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 ++++ VA++V ++ Y F+++ + K+Y+T R+ LL+ T ++ +IA+ G Sbjct: 190 VSLHMVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRCG 249 Query: 268 FRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 F + F F K G+SP QYRK + Sbjct: 250 FNDGNYFGDAFRKEFGLSPLQYRKRQKN 277 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 113/279 (40%), Gaps = 6/279 (2%) Query: 25 YQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL 84 Y+ E + HWH ++EV +G Y I+ + N G I L H + Sbjct: 21 YRFFHNEVKNGRPDILFHWHPELEVTYVCEGTARYHIDYDFFNSQAGDIILIRPNGMHSI 80 Query: 85 TDTGTCQSMA-IFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELN 143 + + F + + +D+ ++++ + + P ++ Sbjct: 81 HPIAKEKHITDNFQFHLDMLGLSVVDQVSLHYLQPLQNSVNKFVHCIKPHMPG--YDDIK 138 Query: 144 SPNEQIRQLAIDE---IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFI 200 + I LA +E ++LK + ++ + + Q++ +I Sbjct: 139 ACLFDIFSLAKEESRHFEILLKSKLHEFIYLLYFHRYVVKKNTDDTYRKNEKIRQLIDYI 198 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 +Y LTI+ +++ + + + M +F++ + +++ +R++ LL + + IL Sbjct: 199 NNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKACELLIHSTRPIL 258 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQT 299 +IA GF + S F F +Y ++P QYRK + +++ Sbjct: 259 EIANEIGFNNLSNFNRQFKRYYNLTPSQYRKKYTKPKES 297 >UniRef50_C3RI67 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RI67_9MOLU Length = 263 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 105/254 (41%), Gaps = 21/254 (8%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 + HWH ++E+ G E +N EK +N + L + + H+L + Sbjct: 30 VMKPHWHDEIELIYCNQGSFELSVNGEKKFVNTKQLVLINSNSIHRLRFLEDQTKIITLL 89 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 L LF + L + ++ +QL + QE Sbjct: 90 LSTELFDEFKL---VQCEFDLSLIKDQEQLEQLIIYLGDHLDQE---------------- 130 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 L++ + +E +L +K ++++ + Q++ +I ++YD L++ +A H Sbjct: 131 TLVIHNRMMQIYELLLEE--CSVYKLAITKKKLPIIKQIVTYIEQHYDDELSLTILANHF 188 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 + Y +F+ +T+ YI +R+NH L +T +I +IAL GF++ F Sbjct: 189 HFSEVYLSRMFKEKTGITLLSYINKIRLNHAYNDLMNTSLTINEIALNHGFKNVKAFNKI 248 Query: 278 FGKYVGMSPQQYRK 291 F +Y P +YRK Sbjct: 249 FKEYYHDIPSKYRK 262 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 109/261 (41%), Gaps = 22/261 (8%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 M SH+H E+ +G+ ++I + I+ G +F H N Sbjct: 20 MSKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQE--------N 71 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKS----LATQQLSPFEVRRWQQELNSPNEQIRQLA 153 +P L + K+ ++ V V++ Q V R +L + + Sbjct: 72 VPFKRLLVY-FSKEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYH 130 Query: 154 IDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDV 213 D I +L L+ +R + V + ++ ++ +I +NY + ++I+ + Sbjct: 131 EDYIHTLLNMALLT---------IARNIQTPVKPEKRNRITDVISYIHQNYQEDISIDQL 181 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 A+ ++ Y F+R T+ QY+ R+ + + + +T+K+I +I+ GF + + Sbjct: 182 AQMSYVSPYYLCREFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITH 241 Query: 274 FYSTFGKYVGMSPQQYRKLSQ 294 F F +GM+P +RK+ + Sbjct: 242 FNRVFKSVMGMTPSNFRKMYK 262 >UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CVW1_PAESJ Length = 294 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 120/292 (41%), Gaps = 18/292 (6%) Query: 13 KQTRSPLSLYSE-YQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQG 71 P +Y+ R E R + + HWH ++++ + G++ IN ++ G Sbjct: 12 PDETFPYIMYTHTIHRSIPEGRGFNDL---HWHEELQITLATKGNLTIQINGIDYRLHTG 68 Query: 72 HITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLS 131 H +TD FN P L + + + L Sbjct: 69 QAIFINKSVLHIVTDLTAEGEYVSFNFPEKLLAFYS------DSAMEKNYVLPFTNSYLL 122 Query: 132 PFEVR---RWQQELNSPNEQIRQLAIDEI----GLMLKRFSLSGWEPILVNKTSRTHKNS 184 FE++ WQ+++ + +++ + + ++ W ++ N + + ++S Sbjct: 123 SFEIKGDTEWQKQILNILWSMKKEFEIKKSWGWQYEISIKTVQLWLILISNISLPSEESS 182 Query: 185 V-SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAM 243 +R Q + ML FI +NY +T+ ++A+ L+ + F+ +++T Y+ Sbjct: 183 KHNRLKQERLQLMLSFIHQNYSNPITLKEIADAAHLSVSECTRSFKTSIRMTPYSYLVKY 242 Query: 244 RINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 RIN LL T+ +I +IA GF + F F K + ++P+++RK + Sbjct: 243 RINKSCELLQSTEYTITEIASRVGFNQVNHFIQAFKKDLKLTPKEFRKNRTE 294 >UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4N0_RUMHA Length = 275 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 89/254 (35%), Gaps = 16/254 (6%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH ++E+ G +N E+ I + + H + A+ P Sbjct: 37 HHWHDEMEILYFSKGSYTLFVNMEQFQIEEKCFYFIYPGELHAIVPHSDSTESALVFHPS 96 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 L + L + + SPFE +E Q D + Sbjct: 97 LLGFEYKLFPQCLKP----------SNPAFSPFE-----KEYRKVFHIFHQFPEDSLSAR 141 Query: 161 LKRFS-LSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 L S + IL S + + L F+ +Y + L I D+A V + Sbjct: 142 LFIQSGIFKMAGILSTFPSLLQTERKTDMRIETIKTALDFLHSHYQEKLYIRDLALQVNM 201 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 N Y F++V+ + Y+ RI LL TD I+++ + GF F F Sbjct: 202 NEQYFCRFFKKVLGKSPITYLNEYRIKQACILLQTTDLPIMEVGMDCGFFHLGNFMKEFK 261 Query: 280 KYVGMSPQQYRKLS 293 KY +P QYRK S Sbjct: 262 KYTETTPLQYRKKS 275 >UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE80_9FIRM Length = 323 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 113/290 (38%), Gaps = 14/290 (4%) Query: 15 TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHIT 74 P+ +Y + + P HWH ++E +G +E+ I G Sbjct: 21 PAFPMEVYLDNLDLYPNRFIPW-----HWHKELEFVYVLEGTIEFQTGVSTYVIGSGQGG 75 Query: 75 LFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKS----LATQQL 130 L + H ++ + +L L LI + + Sbjct: 76 LVPSNMLHMVSPYHRQHGSIYCAVLADSYLLHGLSGGLIEEQYISALFRPETDFFFLDGT 135 Query: 131 SPFE--VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 SP+ V E+ + + + ++ +++++ L +E + + SV Sbjct: 136 SPWHAGVLACIHEMYQCDCSRPRGYLWKLQILVQQAGLILFENL---DMKQEPCPSVHDS 192 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 V L +I + Y L + D+A ++ + F+ V+ + Y+ + R+ Sbjct: 193 RYQRVRCCLEYIHKEYAGRLRLEDIARAANVSVSECCRDFKEVLSQSPVDYLISYRVRMG 252 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 +L+ +DKS+L+IAL GF SS F +TF +Y+G +P YRK + R+ Sbjct: 253 EYMLAHSDKSVLEIALAVGFSGSSHFSNTFCRYMGCTPLYYRKHLMEDRE 302 >UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP25_9FIRM Length = 300 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 107/255 (41%), Gaps = 7/255 (2%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++E G+V + I +N+G+ + + H+L + I N Sbjct: 47 HWHSELEFIYIESGNVVFDIGTVHFELNEGNGIMINSKILHRLQSSSD---AIIPNFLFQ 103 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG--L 159 P D + + ++ SL P WQ++ + I + E + Sbjct: 104 PSFIAPQDSLIYKKYINPVISSSLEYLVFQPDI--PWQKKALEIIKTIIAVQETEFNREI 161 Query: 160 MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 ++ W +L N T +N + ++ + M+ ++ +Y + +T+ D+A + Sbjct: 162 IVSMSVQQLWILLLENLTFDQFENMGAVISRTRLQLMMQYVHAHYSENITLEDIARTANI 221 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 + + A+ +FQ ++LT +Y+ R+ LL +T++ I I+ GF + F TF Sbjct: 222 SKSTALHLFQNNLKLTPVKYLINYRLTQAALLLINTEEKIATISNNTGFNNVDHFCRTFK 281 Query: 280 KYVGMSPQQYRKLSQ 294 K M+P YR + Sbjct: 282 KTYKMTPTDYRNQER 296 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 92/251 (36%), Gaps = 15/251 (5%) Query: 42 HWHGQ-VEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 H H E+ + G + I+ + G + F + H T + + + Sbjct: 2 HQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSCLGVS- 60 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 + L N + + L+ + + +D++ Sbjct: 61 ----DFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDAPCVLDQLTCA 116 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 + +++ H + + +I +Y +++T+ +A + N Sbjct: 117 I---------LCKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFN 167 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 Y F+ + + QYI RI + LL TD+SI +IA + G+ +S+ F S F + Sbjct: 168 PYYLAHAFREHIGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKR 227 Query: 281 YVGMSPQQYRK 291 VGM+P QYR+ Sbjct: 228 LVGMTPGQYRR 238 >UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWT0_CLOB8 Length = 263 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 96/253 (37%), Gaps = 23/253 (9%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP- 99 H H VE+ +G +E IN+ + + G +++ + H G + + P Sbjct: 28 PHLHPYVEIAYVIEGSIEVTINDTQCCLKAGEVSICFPNDIHTFNSDGFSKIILFIFSPD 87 Query: 100 -MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 F +DK L N ++ + + + DE Sbjct: 88 LTRSFFGIRMDKTLENPFMSKNIV--------------------DDGISSLLYMLHDEYK 127 Query: 159 LMLKRFSLSGWEPILVNKTSRTHK-NSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 + ++ + G ++ K S + +L +I +Y + ++++ +A+ + Sbjct: 128 SVNNKYVIKGLLYTILGKLDSHFTFKKSSTFYNSTMQNLLKYIEIHYHEKISLDSIAKDL 187 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 + Y IF + YI +RIN + LLS+TD + IAL GF S F Sbjct: 188 GFSKFYLSRIFSNKIGYQFNDYINRLRINKAQKLLSETDLPVTIIALECGFESQRNFNRI 247 Query: 278 FGKYVGMSPQQYR 290 F + ++P ++R Sbjct: 248 FKELTALTPTKFR 260 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 104/267 (38%), Gaps = 6/267 (2%) Query: 27 RMEIEFRAP--HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL 84 + +R H MP SH+H E+ G E+ I + + I++G I + H+ Sbjct: 12 TFSVSYRKARSHNMPVSHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDIVIISPNILHRT 71 Query: 85 TDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNS 144 T+T T + + ++ D+++ ++ + T Q Q + Sbjct: 72 TNTETPEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIETMLQTMIAE 131 Query: 145 PNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENY 204 +E+ + + L L+ + K+S +S+++ ++ +Y Sbjct: 132 MSEKKPGFELYALTLALQLLLICCRHA----KSSSMETLESPSPMHERISEVVRYMNSHY 187 Query: 205 DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIAL 264 L+++ +AE ++ Y F+ T +Y+ ++RI + LL + + IA Sbjct: 188 MNELSLHLLAEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVNLIAK 247 Query: 265 TAGFRSSSRFYSTFGKYVGMSPQQYRK 291 GF S + F F G P YRK Sbjct: 248 RVGFGSVTHFGRVFKSVTGYVPLHYRK 274 >UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides RepID=C3QPX4_9BACE Length = 325 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 119/291 (40%), Gaps = 9/291 (3%) Query: 13 KQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 K L++ + + P H+H + E+ G+ + L+ + ++ ++G Sbjct: 35 KIMNEKLTITTSNPVRARFYEYPRFTYPWHFHSEYEIIYVEKGEGDCLVGDSIISYSKGD 94 Query: 73 ITLFWACTPHQLTDTGTCQSMAIFNLPMHLFL---SWPLDKDL----INHVTHGMVIKSL 125 + LF + PH + + L + + +KD I+ + + I++L Sbjct: 95 LILFGSELPHSMQSPPDGGEESDNEEKSELKVRGVNIQFEKDFMHYSISQYSQFIPIRNL 154 Query: 126 ATQQL--SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKN 183 F + R + + + +D+I L+L + T+ + Sbjct: 155 LEDACRGIKFTITRSGKIIKLLKQIPSAKGVDQIILLLSLLQMMATSNHRKYLTTSHYTP 214 Query: 184 SVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAM 243 S S + +++ ++ ++Y +++ ++++A + +N F+ T K+Y+ M Sbjct: 215 SPSIMRNERMEKVIAYLNKHYTESIGLDEIASYTAMNPTAFCRYFKENTGKTFKEYVLDM 274 Query: 244 RINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 RI + LL+ + +I I+ T GF S F F + GM+P YR+ + Sbjct: 275 RIGYACKLLNSSMMNISQISATCGFESPVHFNRIFKRVTGMTPTFYREQME 325 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 9/262 (3%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP 99 H H E+ + G V +++ +V + QG + + A H L G ++ + Sbjct: 75 APHKHDFFELIYVYQGSVINVVDAHEVVLQQGDLCIMNASAVHTLGKLGKQDTVYNILIK 134 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE--- 156 LF L N + + S+ + +S + Q+ S + + + Sbjct: 135 PELFNQAFLGLIAENEIISSFFLNSIYQKSISRNFMTFHTQDFPSDDAETYVHRLIMENH 194 Query: 157 -----IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 ++ + + + R +NS VSQ++ +I+++Y + ++I Sbjct: 195 FKDIYYNKSIEISLVGLFIELTRGYKHRQDQNSSIELGMSNVSQIIAYISDHY-KDISIK 253 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 VA+H + NY + ++ T + + +R + L D I +I G+ + Sbjct: 254 QVADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFTAAKEYLQKLDIPINEIVYMVGYTNK 313 Query: 272 SRFYSTFGKYVGMSPQQYRKLS 293 S FY TF + +G++P QYRK + Sbjct: 314 SHFYRTFKQEMGITPAQYRKQA 335 >UniRef50_B7ANK3 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANK3_9BACE Length = 289 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 113/277 (40%), Gaps = 18/277 (6%) Query: 19 LSLYSEYQRMEIEFRAPHIMPTS---HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITL 75 L + + YQ E E+ + + H H QVE+ G + I++ +N G +++ Sbjct: 28 LYMSAFYQNREEEYSVTTTLNNTYPLHLHRQVEMIYVKSGQLRVTIDDNSYVLNAGDLSV 87 Query: 76 FWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEV 135 + PH G +++ + P IN ++ + T+ P E Sbjct: 88 AFPNRPHSTESLGESEAILMIFNP-------EFAGGYINELSRRRPEVPVLTKDTIPHEC 140 Query: 136 RRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ 195 + R I + + L P+L ++S +SV Sbjct: 141 TYAIDHILDCCANGRDFRIAQGYM---HIILGCIMPLLTMQSSVETGDSVD-----ICHT 192 Query: 196 MLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT 255 ++ +IA+N+ + ++++ +A + LN Y IF + + Y+ R H LL +T Sbjct: 193 LIEYIADNFKEDMSLDTIAHDLGLNKFYISHIFSDKIHESFPAYLGRCRSEHAAHLLKNT 252 Query: 256 DKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 ++ DI +GF SS FY F + G++PQ+YR L Sbjct: 253 HMTVTDIGYASGFNSSRTFYRAFQRVYGVTPQEYRNL 289 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 91/260 (35%), Gaps = 6/260 (2%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 ++ P HWH + E+ DG+ + + + + + H + Sbjct: 24 VDHTHPQYEMPFHWHIEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKLHGGSPKDC 83 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 +F+ + S+ D L + I + + + + S E Sbjct: 84 TYECIVFDFNILRQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFDAIRSEEEGY 143 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 + + L + + + + S+ A + L I +Y + LT Sbjct: 144 ELSILGSLLLFFAALQKNEYY------SKEEEYDLKSQKAIEQLKASLELIVTDYAKPLT 197 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 + +++ L+ Y FQ T Y+ RI +S ++ ++ DIA GF Sbjct: 198 LQELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRCGFN 257 Query: 270 SSSRFYSTFGKYVGMSPQQY 289 S F TF KY G++P++Y Sbjct: 258 DFSYFIKTFKKYKGITPKKY 277 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 16/282 (5%) Query: 24 EYQRMEIEFRAPH-IMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH 82 + +E R H M H HGQ E+ F G+ +Y I + K I G + L A H Sbjct: 14 DLFFLEYNKRKGHFTMSVEHIHGQYELYYLFSGERQYFIKDRKYPIAAGDLVLIPANELH 73 Query: 83 QLTDTGTCQSM-AIFNLPMHLFLSWPLDKD--LINHVTHGMVIKSLATQQLSPFE----- 134 + +DTG + F + ++ L++ + LA Q+ FE Sbjct: 74 KTSDTGVPNHARIVLYYNEKYFEQYGKEESELLLSPFLGSRRVFRLAHQERLRFEQLLYG 133 Query: 135 VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVS 194 + + QE +E + A+ E L R ++ NK + + A Sbjct: 134 LLQEVQERPPGHEMPIRHAVAEALLFAARHAIH-------NKPDPSDGSVPPSPAAAKAM 186 Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 ++ ++A+++ + LT++ ++ L+ +Y F++ + +YI R+ + L + Sbjct: 187 EIASYVADHFREPLTLDSLSRQFHLSTSYLSRTFKKYTGFGLTEYIGITRVKEAQHQLRE 246 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 TD+ I +IA GF S S+F F ++ +SP+ YR Q+ Sbjct: 247 TDERITEIAAEVGFESLSQFERVFKTHIRLSPRDYRNQYGQK 288 >UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9M5_9FIRM Length = 315 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 97/262 (37%), Gaps = 4/262 (1%) Query: 32 FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ 91 FR + HWH ++E +V +G+ Y + + +G H + + Sbjct: 38 FRYYNRYFRCHWHPEIEFSVITEGECIYEAGDRVYELKKGDGIFINQNVLH-MAEMKGKL 96 Query: 92 SMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQ 151 + F + LI VI + + + WQ+ L ++ + Sbjct: 97 ECRFGVVRAEAFFLGGSTESLIYRKFMEPVINNPEISCVPFYGDIPWQKRLMRQLAELIR 156 Query: 152 LAIDE---IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQAL 208 + + LM+ W + + + + +I NY + + Sbjct: 157 IYEERPEGFELMMTSGFSLLWLEFVKALGEEKGNAVSINKDAERIRKGISYIQRNYTKKI 216 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 T+ D+AE + + +F+ V++ + +Y+ RI L+ + S+ +IA GF Sbjct: 217 TLKDIAEICQSCQSECCRMFRNVVKESPIEYVNTYRIRRSLILIEEGTYSMTEIAQKTGF 276 Query: 269 RSSSRFYSTFGKYVGMSPQQYR 290 SS F F K +G +P +Y+ Sbjct: 277 SGSSYFTEVFKKKMGCTPSKYK 298 >UniRef50_C8ZWG4 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZWG4_ENTGA Length = 290 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 7/257 (2%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH ++E +G V +++E + ++ I F + PH + + + ++ + Sbjct: 29 PHWHKEIEFIYCLEGTVRLGVDDEIIQMHVDEIYFFSSGEPHFFLSSPNSERI-VYQFDI 87 Query: 101 HLFLSW----PLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE 156 LF P D+ L + + + +Q Sbjct: 88 KLFQGHDNISPNDRPLAKVFETVVNYSKDWPTPIQKEIQTILLSIYHENQKQREGYQYSI 147 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSV--SRHAQFYVSQMLGFIAENYDQALTINDVA 214 + + K +L P+ KT + +S +R F + +L +I NY A+TI DVA Sbjct: 148 LSSLYKLANLLYQLPLKNKKTEKAALDSTLKNRETLFQIDTILDYIESNYLHAITIQDVA 207 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 +HV + +Y F++ + ++ Y+ RI+ + +L + ++A +GF S F Sbjct: 208 DHVGFSPSYFSRFFKKNIGMSFTSYLAEYRIHRAKYILGTELVPMAEVAARSGFSSVKTF 267 Query: 275 YSTFGKYVGMSPQQYRK 291 + F VG SP +++K Sbjct: 268 HHVFKSMVGTSPMKFQK 284 >UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enterococcus casseliflavus RepID=C9A5Y7_ENTCA Length = 279 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 107/254 (42%), Gaps = 18/254 (7%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++++ +G Y I++E++ +N+ + + H F+ Sbjct: 40 HWHDELQIVWVEEGSFVYTIDDEQILLNKNETIIINSRVLHGAVLASENVRYCCFDFSSG 99 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 F++ P+ K+ I + H R +++ + Q + L+ Sbjct: 100 -FIADPVFKEAIEQLVHDRT--------------RSYRRLTLTAQHQAFVQTVRLPLLIE 144 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNA 221 +RF+L + + S+ + + + ML F+ E+Y + LT+ +A+ +N Sbjct: 145 QRFTL---YELFLAALSQLMAARPASPKKETIYLMLAFVHEHYQEPLTVPAIAKAAAINT 201 Query: 222 NYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKY 281 +F++ LT Y+ R++ + LL +T++ I I GF S F F + Sbjct: 202 RTCTALFRQYTTLTPINYLIDYRLSQAKNLLIETEEPISTICYHVGFNHLSYFSKRFQRK 261 Query: 282 VGMSPQQYRKLSQQ 295 G++P QYRK ++ Sbjct: 262 FGLTPLQYRKTYRE 275 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 6/186 (3%) Query: 112 LINHVTHGMVIKSLATQQLSPFE-VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWE 170 I + + + + F + R EL E++ A LKR +L + Sbjct: 333 YIEELASSHSLPAAGRKAEETFVWLGRLLSELGIRYERLASFASCRSAAELKRAALDELD 392 Query: 171 PILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQR 230 I + + + + + + +I +Y + LT+ +VAE ++ Y +F+ Sbjct: 393 RIAADLEVWRQQQAYGK-----LGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKE 447 Query: 231 VMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +T Y+T +RI + L++TD+S+ +I + G+ + F F K G+SP +YR Sbjct: 448 HFGITFIDYVTNVRIERAKEALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYR 507 Query: 291 KLSQQR 296 K Q R Sbjct: 508 KKVQAR 513 >UniRef50_B7C800 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C800_9FIRM Length = 295 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 10/263 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++ + G V Y +N + + + H D P Sbjct: 39 HWHEDLQFVLCTKGYVNYQVNGIEYKLKEKEALFINKGALHMSNDMSEDGEYVTLTFPEE 98 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI---DEIG 158 L + + + + V L +E++ + E+ S I + + D Sbjct: 99 LLFFFKE-----SRMKYKYVWPYTRMDFLRCYEIKE-ENEIISYLYDIYNIYLNGSDMFE 152 Query: 159 LMLKRFSLSGWEPILVNKTSRTH-KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 + W ++ + + N Q V ML +I +Y L++ D+A+ Sbjct: 153 YDVSILITMIWRDLVKSLSKIDFIPNKKDVERQERVQVMLVYIHTHYADELSLKDIADAG 212 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 ++ F +++ +T +Y+ R+ LL D ++ +I+ GF + + F Sbjct: 213 MMSIAQCNRCFNKMLNVTPYEYLIQYRLQKATNLLKDATLNVTEISEIVGFNNVTHFIQA 272 Query: 278 FGKYVGMSPQQYRKLSQQRRQTF 300 F K G+SP++YR + Q + Sbjct: 273 FKKVYGISPKKYRMMEDQDEKGS 295 >UniRef50_B5CMC6 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CMC6_9FIRM Length = 309 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 108/268 (40%), Gaps = 12/268 (4%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT--DT 87 +E+R H H +E+ G+ I +E ++ G + H DT Sbjct: 44 VEYRKAGYSFARHLHTNIEIYRILSGECYMDIQSETIHCTAGEFIMLLPDVVHSFYLNDT 103 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVT--HGMVIKSLATQQL--SPFEVRRWQQELN 143 C+ I P +F + L+ + + +T H ++ + ++ P Q+ + Sbjct: 104 SDCEFQHIHFNP-EMFSTIVLEDEGVFPITLMHAILFSAQFYYRMESDPVIDEHLQKLIT 162 Query: 144 SPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAEN 203 + I + L L +++ T H S + YV+ L +I EN Sbjct: 163 LYASSNSLFSAANINVALMNLML-----YILDHTETEHGFSEPQLQNSYVAYTLNYIREN 217 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 + Q + D+A + ++ Y IF+ M +T+ YI RIN L+ +T ++ +IA Sbjct: 218 FTQKIRQEDIALQLHISVRYLSKIFKNYMGVTLSNYINIYRINRSIELMQNTSLTLTEIA 277 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 L GF+ S + F + +P YRK Sbjct: 278 LQVGFKDSQHYSKVFMNVINATPSHYRK 305 >UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHI4_CLOPH Length = 259 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 120/276 (43%), Gaps = 19/276 (6%) Query: 19 LSLYSEYQRMEIEFRAPHIM-PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFW 77 + L+ E + M H H ++E+ + G VE N + + + + I + Sbjct: 1 MKLFYENKSRTFNLYQGTNMTFPPHLHKEIEILICQKGVVEATCNGQTLLLEESDIMIAL 60 Query: 78 ACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRR 137 T H C+ + P L PL K ++ T++++PF VR Sbjct: 61 PNTIHSYETKEYCEYILCILSPSTL----PLFKPYFQKEFTTPFLQMDQTKKITPF-VRM 115 Query: 138 WQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQML 197 +E + Q +L I + ++ FSL K + T+++ + +L Sbjct: 116 LLEEWENDRNQ--ELMISYLSVI---FSLILKNTTFTEKATSTYEDILPS--------IL 162 Query: 198 GFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDK 257 ++ E+Y + ++ D+A H+ N +Y +F + T+ Y+ +R+N+ + LL +T+K Sbjct: 163 LYVDEHYLEQFSLEDLASHLGFNPSYVSRLFSERVHCTLTHYVMELRVNYAKHLLQNTEK 222 Query: 258 SILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 SI +IA GF + F F + V +P++YRK Sbjct: 223 SITEIAYECGFATQRSFNRVFLQLVNTTPREYRKTY 258 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 5/255 (1%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH-QLTDTGTCQSMAIFNLP 99 H H E+ + G + I++ + G I + + H L D G + + Sbjct: 32 HHLHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIVPGNSIHCSLLDKGKTVTTSALYFC 91 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI-RQLAIDEIG 158 L S + + H + + T+Q + R Q L ++I ++ AI ++ Sbjct: 92 PSLLASMIGSE---SDSLHSLFTTAKTTKQYRYYMEREKQAFLAGLFDEIAKETAIADLY 148 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 L + + V++ T + +S ++ + L +I + + L + +A H Sbjct: 149 SGETVALLIRYAIVFVSRNCGTAQEKLSPLVPAWIKESLAYIDAHLHEELDLKMLAAHAC 208 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 ++ +Y F+ + LT +++ + R+ + LL TD SI IA G+ S FY TF Sbjct: 209 VHPSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLKTTDLSIQAIAEACGYHSMPHFYRTF 268 Query: 279 GKYVGMSPQQYRKLS 293 G +P YRK S Sbjct: 269 RAATGTTPAAYRKNS 283 >UniRef50_B0MHX9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MHX9_9FIRM Length = 306 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 104/268 (38%), Gaps = 9/268 (3%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 +E + +P HWH ++E+ G +EY K+ +G + + H Sbjct: 32 VEFDRCIGGQIPW-HWHKEIELFYIEKGTLEYDTPGGKIVFPEGSGGMVNSNILHSTKSL 90 Query: 88 GTCQSMAIFNLPMHLFL-----SWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQEL 142 + + L LD+ I T + L+ +P E R + Sbjct: 91 DPKKDTIQLDHIFDSSLISGQHGSLLDQKYILPFTGSPQAEILSFYPRTPKEKRLLKLLR 150 Query: 143 NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 +S + + ++L+ W +L + + + M+ +I + Sbjct: 151 DSFFLSPHEFGYE---ILLRSALSKLWCLMLSLSRPLLGQKKPQSGSDQKIKSMMEYIQD 207 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 +Y + LT+ +A ++ IF++ + +T +Y+ RI +LSD S+ I Sbjct: 208 HYSEKLTVPRIALAAYISERECFRIFRQSLGITPSEYVKNFRIRQACIMLSDPSLSVSYI 267 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + G SSS F TF + +G +P++YR Sbjct: 268 GQSCGLGSSSYFGKTFREVMGCTPREYR 295 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 104/252 (41%), Gaps = 6/252 (2%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 H H +E++ +G + + ++ + I +G + + T H + + I+N Sbjct: 34 HTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPIGTSHVFRPSSQDNQLVIYN---- 89 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI--GL 159 L + L + + + SL + ++Q + + + + + + G Sbjct: 90 CIFRTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKFDKFLSIMHGMFREYLKKGP 149 Query: 160 MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 + + +L S+ + + +I +++ LT+ VAE + Sbjct: 150 RYEFLMMGQLIQVLAMLQRYECDGSMVSTPTNNMDDAIQYINDHFATNLTVQQVAERSFM 209 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 + ++ +F++ +T Q++ +R+ LL T+ SI + A G++ F+S F Sbjct: 210 SPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSLFR 269 Query: 280 KYVGMSPQQYRK 291 K G++P++YR+ Sbjct: 270 KKTGVTPREYRR 281 >UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=C7G9X0_9FIRM Length = 303 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 119/305 (39%), Gaps = 18/305 (5%) Query: 1 MNTDTFMCSSDEKQTRS------PLSLYSE-YQRMEIEFRAPHIMPTSHWHGQVEVNVPF 53 M T ++T P + Y + + + HWH ++E Sbjct: 6 METFKITTDETLRETIQHGNNRYPFAYYPDNIWKFDFHRID------WHWHHELEFLYTA 59 Query: 54 DGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL--FLSWPLDKD 111 +G LI K+ +++G + H+ + + I P L S +K Sbjct: 60 EGTALCLIGTSKIELHKGCGIFINSGVLHRFEAQSSTFAPNIVFSPTLLAPENSLIYEKY 119 Query: 112 LINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEP 171 ++ ++ + + + +V + ++ + E + I L+ + +++ Sbjct: 120 ILPVISSSVPYQVFSPSNTFGKQVLQLLSQICTIQETKPDNELCTIQLLFQLWNILQKNM 179 Query: 172 ILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 + ++ H+ + H Q + M+ +I ++Y + +T+ +A ++ + A+ IFQ Sbjct: 180 DWTSDSNSIHRLN---HKQARLQAMMQYIHDHYMEEITLETIAASASISKSGALHIFQTG 236 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + + Y+ R+ L T KS+ IA GF SS F F +Y MSP +YRK Sbjct: 237 IHCSPVAYLIQYRLAQAAEQLYITQKSVSSIAEETGFTSSGYFCRKFRQYYHMSPNEYRK 296 Query: 292 LSQQR 296 + Sbjct: 297 RKTEE 301 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 105/305 (34%), Gaps = 26/305 (8%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIM------PTSHWHGQVEVNVPFD 54 ++ T M + +++R+ + + + + HWH ++EV V Sbjct: 3 LHRTTVMVDTHGRESRA-----DDIHQFDFAAYDADMHQFISGCIPPHWHDELEVFVLLS 57 Query: 55 GDVEYLINNEKVNINQGHITLFWACTPHQLT--DTGTCQSMAIFNLPMHLFLSWP---LD 109 G VE + + +N G H G C+ F + P D Sbjct: 58 GQVEVVTGDISCIVNAGEGCFINGGVLHTFRALSLGECR-YHSFVFESSIVAGAPGSIFD 116 Query: 110 KDLINHVTHG--MVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLS 167 + + + + PF + + ++ + D R SL+ Sbjct: 117 TKYMKPFVEKGHSFVHMKRDEGMEPF-FEEFDRCFDACAGEGYAYEFD------IRDSLT 169 Query: 168 GWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGI 227 + + + + A+ + MLG+I N +T++ +A + I Sbjct: 170 RMILCIAQNMNAPGDSDMPHLAEVRIKDMLGWIDRNLKDEITVSGIAGSANICVRECQRI 229 Query: 228 FQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQ 287 F + + +Y+ RI LL T + + DIAL GF S S F F VG +P Sbjct: 230 FSQYVHYRPMEYVQRRRITLAAELLRTTHRQVTDIALECGFSSVSYFIKQFKNIVGCTPT 289 Query: 288 QYRKL 292 YRK Sbjct: 290 GYRKK 294 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 95/266 (35%), Gaps = 13/266 (4%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG- 88 I + ++M H+H E+ G I+ + + G + H+ Sbjct: 26 IRRSSSYVMKRPHYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRALYEEG 85 Query: 89 ---TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 M F + + + + + + E Sbjct: 86 LQAERYDMYFTKEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHE---N 142 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 ++ + + L+ + L G + ++ K+S++ ++ + + +I Y Sbjct: 143 GQEDAYSHVQQQSLLFQILVLIG-----RCQDTQQEKDSLND-SEAAIVKAARYINLQYR 196 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + LT++ +A ++ Y F+ K+Y+ +R+ LL +TD ++ IA+ Sbjct: 197 EHLTLDAMAAMSNMSPTYFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIA 256 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRK 291 GF + F F K G+SP++YR Sbjct: 257 CGFSDGNYFGDVFKKLTGLSPREYRN 282 >UniRef50_C5RJM2 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJM2_CLOCL Length = 286 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 9/269 (3%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQS 92 + + MP H H E+ G+ Y+INN I +G I L H+ T G Sbjct: 21 KVFYTMPREHSHDYYEIYYQLYGERYYIINNRSYYIKKGDIVLINKGVFHKTTYAGAINY 80 Query: 93 MAIFNLPMHLFLSWPLDKD----LINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQ 148 + L + ++ L++ + I +L+ Q FEV + + ++ N + Sbjct: 81 ERVLVGFKEHILKDIIPQEEFTELLSTFEKDISIINLSIQNQHTFEVL-FTKLIHENNNR 139 Query: 149 IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQAL 208 + L+++ + + +++ + VS++ +I +N D+ L Sbjct: 140 LSSYETYSKLLLVELLININRHLEKGHVSYLEFPSALHKK----VSEIAQYITDNCDKVL 195 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 ++ +A ++ Y +F+ V + Q+I + RI + LL +T I +I GF Sbjct: 196 NLDILAHKFLISPYYLSRVFKDVTGFNLIQFINSERIKKSQYLLIETSLPIYEICEVVGF 255 Query: 269 RSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 S+ F F + MSP +YRKL+ +++ Sbjct: 256 NSTIHFTRVFNSFTSMSPSKYRKLNSKQK 284 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 90/262 (34%), Gaps = 10/262 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG-TCQSMAIFNLPM 100 HWH + E V G V + +++ + G + L H + G + Sbjct: 38 HWHSEAEFIVVTRGSVCLQVGSQRHVLADGGVALLSGGELHSMASPGKGPSECKAIVFGL 97 Query: 101 HLFLSWPLDK---DLINHVTHGMVIKS---LATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 L D+ ++ + G + + P R + + EQ + Sbjct: 98 DLLEGPSGDRVQQSYLSPLASGKLRLPGAIAHDHPVRPHLAARLCEIAEALEEQPVGYEL 157 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 G + + +LV + R + + +L +I E+ L + D+A Sbjct: 158 AVKGCLYDVLAQLFRAKLLVEDSPR---REMDDRRADTLKAVLTYIDEHLSDKLRLADLA 214 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 ++ + F+ + QY+ R+ LL D ++SI I + GF S F Sbjct: 215 RVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAADLLKDPNRSITAIGMDLGFHDVSYF 274 Query: 275 YSTFGKYVGMSPQQYRKLSQQR 296 F Y +P YRK ++ Sbjct: 275 IKVFRSYKHCTPLAYRKALLRK 296 >UniRef50_UPI0001C3592F AraC-like transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3592F Length = 284 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 113/276 (40%), Gaps = 13/276 (4%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 E SHWH +E+ + G++++ + +I + + + + H + D Sbjct: 19 FLFEGGEGKYKRASHWHRSIEIFLVMKGEIDFYLGERHFSIGEKNFIIVNSNEVHSI-DA 77 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 + +P+ F + ++ ++ + ++ L R ++ + + Sbjct: 78 PLPNRTLVLQIPVQTFEVYLQEQPYLS-FSRRSGEQNEKLMGLVMEMYRTYENKAYAWEL 136 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 ++ L L+L F P ++ + K +S++ ++ +YD+ Sbjct: 137 KVSGLFEFVKYLLLTEFKDQAQAPDIIRQKIHLEK----------LSEITEYMKNHYDEP 186 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 L++ VA+ + Y IF+R ++ + Y+ +R+ + + TD + DIA+ G Sbjct: 187 LSLEKVADRFGFSPTYLSRIFKRYANISYRDYLQDLRVEYAVKEMVHTDHELGDIAVNHG 246 Query: 268 FRSSSRFYSTFGKYVGMSPQQYR-KLSQQRRQTFPG 302 F S F F K G P +YR KL ++R ++ G Sbjct: 247 FADSRAFAKAFAKRYGCLPSEYRKKLKEERGESSEG 282 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 110/276 (39%), Gaps = 11/276 (3%) Query: 25 YQRMEIEFRAPHIMP----TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACT 80 R ++FR H + +HWH +E+ +P +++ +K + +G I + + Sbjct: 13 NYRNSMDFRLFHNVDYEDYPTHWHVGIEILMPVTEIYGVIVDQKKYVLQEGDILIVNSGV 72 Query: 81 PHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQ 140 PH L T + + I L S + L+ I L P + ++ Sbjct: 73 PHALEAPPTGERI-ILQFDPALLYSLKEMETLLLLFPPVFYITPENEPDLYPLVKAKMEE 131 Query: 141 ELNSPNEQ------IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVS 194 + + Q + ++ E+ + R + R K Q Sbjct: 132 IIREYDGQQAFAGALVYASLIELFAGVGRITRERNIEGTALHDMRRSKQDRQWEYQEVAL 191 Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 + +I ++Y + LT+ + A+ V + + +F++ M +T +Y+ R+ LL Sbjct: 192 KACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMTFYEYLNKKRVKCAEGLLYS 251 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 T+ SI D+A+ +GF S S F TF SP ++R Sbjct: 252 TEMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFR 287 >UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZHR1_EUBR3 Length = 276 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 97/254 (38%), Gaps = 9/254 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH +E+ G ++ + + + + + + H + + + +P Sbjct: 32 HWHDHIEIIYVVSGSLQVVCGENEYTLKENEFFVINSNKIHGTQSYERVRVLLV-QIPYA 90 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 S+ D I + + + + + L S R+ L L Sbjct: 91 YLDSYIDDYGQIRF-------RECYETENGSRKYEQMKSLLKSIAHIYRKKGKG-YELRL 142 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNA 221 + N + + + +L ++A+NY + + + + A+ LN Sbjct: 143 MAKVNEFLYILFTNYSYKEMNAGKESRQIARLKDVLRYVAKNYQEPIALKEAADIASLNQ 202 Query: 222 NYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKY 281 +Y +F++ M +T +Y+ +RINH+ L T+ SI DI GF + F F Sbjct: 203 DYFCRMFKKCMGVTFLEYVNQVRINHIHEELLATEDSITDILEHNGFTNYKVFSRMFKAQ 262 Query: 282 VGMSPQQYRKLSQQ 295 GM+P++ RKL + Sbjct: 263 FGMTPRELRKLQEN 276 >UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEF5_ALKOO Length = 854 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 103/257 (40%), Gaps = 3/257 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH VE+ + G+V + + K + + + L + +T + + Sbjct: 29 HWHSAVEILLVLQGNVSLGVGDHKYLLKENDLILINYNEIYSITRGKEDNLLLSLQIDPV 88 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 + D + V Q VR + ++ + + I + Sbjct: 89 TLSQY--DPNFSRLVFDCKSFMYCKDNQEKFDVVRYYMAKVVWEYSKKKPGYQLRIASNI 146 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNA 221 + L N+ K+ + + ++L +I EN D+ +++ +A++ ++ Sbjct: 147 HLLAAHLVNN-LTNENLNQLKSEIKDKDLARLKRILSYINENIDKKISLKTIAKNEHISY 205 Query: 222 NYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKY 281 Y + + +T ++YI +R++ LL ++K+I +++ +GF + F F + Sbjct: 206 FYLSRFIKDNLGVTFQEYINTLRLDKAVNLLLSSNKTITEVSYESGFANIKLFNKLFKET 265 Query: 282 VGMSPQQYRKLSQQRRQ 298 G SP QY+K+ ++ + Sbjct: 266 FGASPLQYKKIHKESSE 282 >UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSF8_CLOPH Length = 292 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 107/263 (40%), Gaps = 6/263 (2%) Query: 40 TSHWHGQV-EVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNL 98 H H E+ G +Y I++ ++ G + + HQ + + F Sbjct: 30 AYHAHQDFTELTYILSGTSKYRIDDIYYDVKAGDMIVCNPGVFHQNMLLDGEEPLVEFCT 89 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 F + ++ I G ++ + + E R ++ + NE + + Sbjct: 90 GFTDFQFKNMPENTIQLSNQGHIVHLSSEAK---RETSRLCYDMLAENEAGQVGKYFMLK 146 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY-VSQMLGFIAENYDQALTINDVAEHV 217 L + + ++ + +++ Y V +++ ++ ENY+ ++++ +A ++ Sbjct: 147 AQLIQMLMLLMREVIEAPKVTQKGCNFETYSKSYAVKRIINYLMENYEHKISLDQIAHNM 206 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTD-KSILDIALTAGFRSSSRFYS 276 L+ Y IF+ + Y+ +R+ + +LS+ + SI +IA G+ F Sbjct: 207 YLSPVYISKIFKEETGESPINYLIKIRLEKAKEILSEREGGSIKNIANEIGYDDVYHFSK 266 Query: 277 TFGKYVGMSPQQYRKLSQQRRQT 299 F KY G+SPQ YRK +R T Sbjct: 267 LFKKYFGISPQNYRKSLIAQRTT 289 >UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B6C Length = 303 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 96/264 (36%), Gaps = 5/264 (1%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG--TC 90 R P HWH +E G++ Y IN + + + + + H + C Sbjct: 38 RYPDRKALCHWHDDLEFIRIVHGEMNYYINGKNLVLKEHDGIMVNTRQMHYGSSINQNDC 97 Query: 91 QSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIR 150 + I P + + + + + + + P + + Q++ Sbjct: 98 SFLCILVHPALFSSNRLIYQKYLLPLLEDRETEFVYLDSGRPD--HGFILDCLMEMTQLK 155 Query: 151 QLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ-MLGFIAENYDQALT 209 + L + W + + V + M+ FI ++Y + LT Sbjct: 156 EHGEYGYELEIIGLFYLIWRHLARQFKAGKTAAPGIEDMDTKVQKDMVSFIYQHYTEKLT 215 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++ +A + + IF++ + + ++ + R+ LL TDKSI +IA GF Sbjct: 216 LSAIAASGGVCRSKCCQIFKKYLCQSPIDFLNSYRLEVSSHLLKKTDKSITEIATECGFN 275 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLS 293 S + F ++ G +P+Q+R Sbjct: 276 HLSYYSELFMRHYGCTPRQFRSQH 299 >UniRef50_C6CZY9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZY9_PAESJ Length = 283 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 6/255 (2%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 H H + E+ G + LI + + G++ L T H + + Sbjct: 24 FHSHLEYEIYYFHSGKCKLLIGDSIYELAPGNLILMNGMTLHYPSIDNRYEYCRTVVHFD 83 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ---QELNSPNEQIRQLAIDEI 157 F S + + ++ L E R + + L + L+ D + Sbjct: 84 PAFASGLFQPPFLIPLLLPFERQTNRLISLKAEEQARIEPLLERLCQLRQSNDPLSHDRL 143 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 L + L +E + + +H V +++ +I E+Y + L ++D+A+++ Sbjct: 144 ILCFQELLLLIYEFAHMPSYGQASPPGSIKHQN--VQKLIAYIEEHYREDLELDDIADYM 201 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL-SDTDKSILDIALTAGFRSSSRFYS 276 LN +Y + IF+ +T+ Y+ RIN + L + D+SI + A GF+ S F Sbjct: 202 HLNKHYLVKIFKETTGITLFHYLYQRRINQAKMLFTMNPDRSITETAFEIGFKYVSHFSQ 261 Query: 277 TFGKYVGMSPQQYRK 291 TF K+ G SP YRK Sbjct: 262 TFKKFTGQSPDDYRK 276 >UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C6D193_PAESJ Length = 833 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 100/262 (38%), Gaps = 8/262 (3%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP 99 HWH ++E+ G V ++ + + + I + + H+L T + Sbjct: 27 RFHWHKEIELIYVLQGAVTVYVDQRQYRLAEDDIIAINSMSVHKLECTNLDNVLLTLQFG 86 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGL 159 L + L + + + + R E N R ++ + Sbjct: 87 PELLDD---EGTLFDCNSMSQTEYNRYRYDRLRRCLARMVWESNKKGPGHRNYSMGSLQT 143 Query: 160 MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 ++ + T+ + + +++++ ++ ++Y++ +T+ +A+ L Sbjct: 144 LIGHLT-----RYFTAGTNGGPREKGKDYDYMRLNRIIQYVDKHYNEKITLQTIADQEHL 198 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 + +Y F + + ++Y+T +R+ A LSDTDKS+ IAL GF + F F Sbjct: 199 SLHYFSHFFSDKIGIPFQKYLTLIRLEKAAAQLSDTDKSMTQIALDCGFANVKLFNQYFK 258 Query: 280 KYVGMSPQQYRKLSQQRRQTFP 301 G +P YR + P Sbjct: 259 GKYGSTPGSYRDALANAKTVDP 280 >UniRef50_UPI000178A094 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A094 Length = 289 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 109/279 (39%), Gaps = 13/279 (4%) Query: 21 LYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACT 80 LY Y+R + T H H +EV G ++NN I G + +F C Sbjct: 13 LYFAYRRKSENY---EHKETFHSHLGLEVLFIHQGRGTMIVNNNSYEIKPGMLCIFQPCQ 69 Query: 81 PHQLT---DTGTCQSMAIFNLPM----HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF 133 H L D C +I F WP + N + G + + P+ Sbjct: 70 LHHLKLEYDDHQCFERSIAIFEPTVFEAYFKQWPALHEFYNFIYLGNLPFPCLYEVDDPY 129 Query: 134 EVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV 193 ++ + +EI L L +PI + R+ ++ V Sbjct: 130 LEGAYKSMNDRFPTLSDTEKYEEISLFLVAL-FRSLKPIWDKRKVRSSTYQTRKNH--RV 186 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 +L +I NY ++D+A+ + L+ + +F+ +++ +YI A RI+ LL+ Sbjct: 187 EHILTWIETNYTIPFRLDDMAKSLHLSPYHLSHLFKEATGISITEYIAARRIHQSIQLLA 246 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 T K I IA G +SS F F +G++P QYRK Sbjct: 247 TTKKPISLIAEEIGLTNSSYFCKLFKSQMGITPHQYRKK 285 >UniRef50_UPI0001BC838F helix-turn-helix- domain containing protein AraC type n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC838F Length = 289 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 3/250 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI-FNLPM 100 H+H E+N+ + + +I + + + L PH+ ++ I Sbjct: 32 HFHSDYELNLVMNTSGKRIIGDSIEDFENCDLVLLGPGLPHKWKAPTLDETQVITIQFHE 91 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 ++ S+ L+K + + ++I+S + R ++ L + + E + Sbjct: 92 QMYNSFLLNKRVFEPIRE-LLIRSTRGIVYTGKTFERVKERLLNLSNARGFNTALEFYSI 150 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 L S++ E L+ S V + ++ +I N+ + +T+ ++AE V ++ Sbjct: 151 LYDLSIAD-EQRLLTSASYDSSLLVRESRSRRIEKICKYIEVNFKKDITLKEIAELVNMS 209 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 + F++ + Y+T +RI + LL++T +S+ DIA GF + S F F K Sbjct: 210 ESAISHFFKKRTNRSFITYLTDVRIGYASRLLAETTQSVADIAFECGFSNLSNFNRIFKK 269 Query: 281 YVGMSPQQYR 290 Y +P YR Sbjct: 270 YKNQTPTDYR 279 >UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RST4_9CLOT Length = 307 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 99/262 (37%), Gaps = 16/262 (6%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH +E+ G ++ + + +++ QG + + H C+ ++ P+ Sbjct: 45 HWHEDLEIIYVESGHLKLQVPGKTLHLKQGEGAVVNSNILHFAAAEPLCELHSLVFHPLL 104 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQ-IRQLAIDEI--- 157 + +KD + + V L + +L + N + A D Sbjct: 105 V----TGEKDSV--FSRRYVAPLLQCRSFDICPFDYLAGDLRAGNPAAVFTAAFDAFCGE 158 Query: 158 ---GLMLKRFSLSGWEPILVNKTSRTHKNS--VSRHAQFYVSQMLGFIAENYDQALTIND 212 + R LS L S +S + + +M+ FI E++ + L + Sbjct: 159 PLGYEFVVREKLSCICCCLYMYYSHAMDSSKPMPDTDNIRIQKMISFIHEHFQENLDLAQ 218 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH-VRALLSDTDKSILDIALTAGFRSS 271 +A + + F+R +Q + QY+ R+ LL SI IA GF S Sbjct: 219 IARAADIGERECLRCFKRAIQTSPLQYLLKYRVTQGASMLLRSPHSSISSIAGMCGFNSP 278 Query: 272 SRFYSTFGKYVGMSPQQYRKLS 293 S F F ++ +P++YRK S Sbjct: 279 SNFSQMFVRFFKCTPREYRKAS 300 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 108/271 (39%), Gaps = 18/271 (6%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH ++E+ + G Y I+ + + G I L H + + Sbjct: 50 FHWHPELEIQYVYGGTARYHIDYDYFDSQAGDIFLIRPNGLHSIHPVDNQPH----HTDT 105 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 F L + L++ ++ ++ L Q S F+ ++ + + +I+ L ++ Sbjct: 106 LHFHLDMLGQSLVDPLS----LRYLQPLQNSNFKFKQCLRPSDEGYTEIKDLLFKIFKMI 161 Query: 161 LKR----------FSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTI 210 ++ + + + + +++ +I ++Y + LTI Sbjct: 162 RQKERHYELLLKSKLEELIYLLYFYRLVERKTSDDHYRKNEKIREIIDYINQHYAENLTI 221 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 ++E + + + M IF++ + ++I R+N L ++ K +L+IA T GF + Sbjct: 222 EKLSELMGYSKTHFMTIFKQHTGTSCTEFIIQARLNAACEELRNSVKPVLEIATTVGFNN 281 Query: 271 SSRFYSTFGKYVGMSPQQYRKLSQQRRQTFP 301 S F F Y +P QYRK +++T Sbjct: 282 LSNFNRQFKHYYDQTPSQYRKTHSNKKKTKK 312 >UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I9A5_CLOCE Length = 289 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 10/255 (3%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH E+ G IN +++ + + + H + G+C AI Sbjct: 33 PHWHNHFEMVFSQKGSCMVYINGSSFLVSENQLIIIPPGSLHSIFPQGSCSYCAIVA-GE 91 Query: 101 HLFLSWPLDKDLINHVTHGMVI-----KSLATQQLSPFEVRRWQQELNSPNEQIRQLAID 155 LF D + +T M I L+ + + EL N+Q R Sbjct: 92 SLFEGLVADPHISEVLTPFMSIGFYPPLHLSEKDRVFKKCFLLVHELQRENDQKRNG--- 148 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 G +K + + + + S K + + + L ++ +Y + +T+ND++ Sbjct: 149 -YGARIKSQMIILFSVLQESLPSEFFKKNKLPDSTRLIKYSLDYLRIHYSERITVNDMSV 207 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 + L+ + +F+ T +Y+T R+ R +L TD I I GF +S+ F Sbjct: 208 YCHLSIQHFSRLFKACTGKTFVEYLTLFRLEKARKILIGTDIPITQIPDLVGFCNSNYFC 267 Query: 276 STFGKYVGMSPQQYR 290 + KY G P + R Sbjct: 268 RLYKKYYGHPPSKDR 282 >UniRef50_C9AXU1 Transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AXU1_ENTCA Length = 299 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 111/279 (39%), Gaps = 19/279 (6%) Query: 23 SEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH 82 + Y + +E + H H E+ G + + ++ + + + A H Sbjct: 13 TAYYSVALERFS----MDPHQHPACEIMFVTKGKCKIKVQDQVIVLERNDFVFINAFVEH 68 Query: 83 QLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQ-- 140 L G ++ + S +D+ ++ + + + + + + Sbjct: 69 ALLVEGDSCTILNIEFLLSETPSGLCVRDVFAYIKGNVQLNEPYAKSRDVRQFGQAIKSL 128 Query: 141 ----ELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQM 196 ++ EQ I L+ KR + + +T R YV+ Sbjct: 129 LQLLMIDDTQEQPSAERQFTIELLFKRMLMELAFSLRTKETKR---------GNCYVNAA 179 Query: 197 LGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTD 256 + +I +++D+ + ++ +A V + Y +F + +T+ ++T+ R+ LLS++ Sbjct: 180 INYIQQHFDEDIQVSQIAAAVGITKTYLHKLFHEQLGVTVNHFLTSERLKQAAFLLSNSQ 239 Query: 257 KSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 I++IA AGF S F +TF + GMSP+ Y+ L +Q Sbjct: 240 LPIVEIAAQAGFNSRQHFTNTFKQKKGMSPKAYQLLYKQ 278 >UniRef50_C6LAW9 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAW9_9FIRM Length = 303 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 99/277 (35%), Gaps = 23/277 (8%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P H H E+ DG + ++++ Q + PHQL + + Sbjct: 23 PEYHMPVHSHTSCELMYVTDGVCTVFCDGTEISLKQNQFIFIDSAVPHQL-EIAAGHPCS 81 Query: 95 IFNL---------PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 I NL P+ + + Q+ + ++ L Sbjct: 82 ILNLEFTVHTEKTPLPMQQLLEESAEFRKFWASRPPFAVSDDQRSMGYSMKDLLSRLQKQ 141 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 EQ L L+ R L + S Y+ + +I + Sbjct: 142 PEQPDFL----FRLLFYRMLLEMTWCF---------RRRRSASGLEYLKKACDYIDRHLL 188 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + L+I +A +N +Y +F R M T+ YI R+N LL+++ S+ D+A Sbjct: 189 EELSIPAIAACAGVNKSYLQALFSRTMHCTIGSYINQKRLNQAVFLLTNSSLSVTDVAFA 248 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFPG 302 +G+ S F TF K+ G+SP YR+L ++ G Sbjct: 249 SGYNSRQHFAHTFQKFYGISPSHYRRLHSRQLLPDTG 285 >UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQZ7_9FIRM Length = 296 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 105/281 (37%), Gaps = 9/281 (3%) Query: 18 PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFW 77 P++ YS+ + P HWH E+ G ++Y + + + G Sbjct: 21 PVAFYSDELADLPDRAGPV-----HWHPYFEIATAQSGVLDYQVGQTHIRLEPGDSIFVN 75 Query: 78 ACTPHQLT----DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF 133 H + + +F+ + + + I V + + + S Sbjct: 76 QNMLHGIRQLSGAAPDPLPILVFSGTVVAPEHSAVYRKYIQPVLGCSTLPFVVFRHDSDL 135 Query: 134 EVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV 193 QQ + + + A E+ + S+ ++ + V AQ + Sbjct: 136 WQAVRQQIHRACDAMRERPACYELTVQRSLCSVLEAIFRHLDSLPPLPSSRVQLTAQIRL 195 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 +ML ++ E+Y Q +T+ D+A ++ + A FQ + + + + R+ +L Sbjct: 196 QKMLSYLYEHYAQPVTLADIAAAAHISRSEAGRCFQAYLGCSPVEALIQYRLQRAWRMLQ 255 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 +TD + +I+L GF S F F K G +P + RKL + Sbjct: 256 ETDMTQQEISLACGFHSVQYFRRQFRKRYGCAPGEKRKLGK 296 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 14/281 (4%) Query: 18 PLSLYSEYQRMEIEFRAPHIMPTSHWH-GQVEVNVPFDGDVEYLINNEKVNINQGHITLF 76 P L+ E P H H +E++ G V+YLI EK + +G + + Sbjct: 13 PQILFVIDGWCSPEIPVPET--NYHCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLIS 70 Query: 77 WACTPHQ--LTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL--SP 132 HQ C+ + I ++LF + + KD I+ ++ + ++ S Sbjct: 71 NPGVYHQELFEANTNCRELHIGLTNLNLFSN--VKKDYIDIGNKNVLTFTKYKDEILKSC 128 Query: 133 FEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY 192 E+ Q+ N + + + + ++ ++L R + SR + Sbjct: 129 LEIVEEQKTYNQTSPFMLKSLVMKLLVLLYREINEE-----DTTRDSKEFSFKSREKKAL 183 Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 V + ++ ENY + +++ +++++ L+ Y IF+ +M + Y+ +R++ + LL Sbjct: 184 VESITKYLTENYTEDISLYTLSKNMYLSPVYISKIFKELMGDSPINYLIQIRLSKAKELL 243 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 D+ SI IA G+ F + KY G+SP + R S Sbjct: 244 DDSKLSIKSIAKMVGYSDPYYFSKLYKKYYGVSPNKSRNAS 284 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 111/254 (43%), Gaps = 17/254 (6%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 H H +E+++ +G+ EY++ ++ + G + LF T H G Q ++ +H Sbjct: 30 HHHEFLEISILLEGESEYIVQGQQYHATAGTVFLFNPRTEH-----GEQQKAGTYSHQLH 84 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ--QELNSPNE----QIRQLAID 155 + +S + L +V + F + WQ ELN QI+ L I+ Sbjct: 85 IGISNLYLEGLARNVFPNKSALLDLSHLHGAFLEKAWQIVHELNHQEVESALQIKALVIE 144 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 + +L+ ++ I T + + + V+ + ++ ++D+ +T+ +AE Sbjct: 145 LLVYILRSLAVDQENKI------ETRLSKTEKRKRNLVNHTIYYLETHHDEEITLEQLAE 198 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 + + Y F+ + Y+ +R+NH + LL + S+ ++A T G+ + F Sbjct: 199 MLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLSVKEVAKTVGYEDAYHFS 258 Query: 276 STFGKYVGMSPQQY 289 F KY G SP Q+ Sbjct: 259 KLFKKYYGKSPSQF 272 >UniRef50_C6D0F8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0F8_PAESJ Length = 275 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 107/263 (40%), Gaps = 11/263 (4%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSM-AIFN 97 P H H EV G YLI ++ + G + + + T H + + + +I + Sbjct: 14 PFFHSHMHYEVYYFHGGKCNYLIGDQIYELAPGDLIIMYGMTLHCAKADPSVEYIRSIIH 73 Query: 98 LPMHL---FLSWPLDKDLINHV--THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQL 152 L +L P ++++ + ++ + + E + + Sbjct: 74 FEPTLLQPYLELPHARNILQPFQQLNNYRLRLRGEDKAEVERILARMDEYQKRGDAVGDN 133 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 + L L E L+N+ + + S + V +++ + ENY + L + Sbjct: 134 RFRLAFVDLLYMILDHCEQPLLNRNRQEY----SSEKEATVQRIISVLEENYTEDLNMEL 189 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL-LSDTDKSILDIALTAGFRSS 271 + E + L+ +Y +F+ V +T+ YI RIN + L L + S+ ++ GF+ Sbjct: 190 LEERLHLSKSYLSKLFKEVTGVTIFHYIYTRRINEAKILFLMQPELSVTEVCFRLGFKHL 249 Query: 272 SRFYSTFGKYVGMSPQQYRKLSQ 294 + F F +Y GM P+Q+RK Q Sbjct: 250 AHFSRLFKQYAGMPPEQFRKREQ 272 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 96/258 (37%), Gaps = 8/258 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTC-QSMAIFNLPM 100 HWH ++V G + + + + H L T I P Sbjct: 34 HWHEHLQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELHYLESTSDNLVFYTIRFEPS 93 Query: 101 HLFLSW--PLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI-RQLAIDEI 157 LF + L + +T + + Q + + + N++I +LAI Sbjct: 94 FLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKIGYELAIKGY 153 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 L L ++ ++ K + I + Y++ +T++ +A V Sbjct: 154 IYYLVVTLLRNHVQHILTQSELDDKEAT----LIRFQPAFELIEKKYNEKITLSKLANTV 209 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 L+ ++ F+++ T YI +R++ L TD +I +IAL GF + + F Sbjct: 210 GLSVHHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNYFSRI 269 Query: 278 FGKYVGMSPQQYRKLSQQ 295 F KY SP QYR L + Sbjct: 270 FKKYHSTSPSQYRNLYKN 287 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 108/264 (40%), Gaps = 25/264 (9%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P H H ++E+N G+ + NE ++ ++ + + + H ++ Sbjct: 36 PFETFGPHKHLRIEINYVKKGNCILHLENESISFSENEMMVICSNVEHTFEAGSEDTTLM 95 Query: 95 IFNLPMHLFLSWPLD-----KDL--INHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 +F + D KDL + + + + V+R E+N ++ Sbjct: 96 QLEFLPEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVNEMNQKSK 155 Query: 148 QIRQLAID---EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENY 204 + L + E+ +++ R+ + PI N + + + + +I NY Sbjct: 156 YYQYLVVMYYAELLILIYRYLDEAYLPICTNDS---------------LKKAISYIRLNY 200 Query: 205 DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIAL 264 +TI+DVA + Y +F + + L+ Y+ +RIN LL +T+ S+ ++ Sbjct: 201 QSDITISDVASQTGVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCF 260 Query: 265 TAGFRSSSRFYSTFGKYVGMSPQQ 288 GF+S F F + +G+SP++ Sbjct: 261 ACGFQSPQYFSRIFKQQMGISPRE 284 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 100/254 (39%), Gaps = 8/254 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH +E+ +P +G I ++ V++N+ I + H+L T + + I + Sbjct: 34 HWHTPMEIIMPLEGGYTVQIGDDLVHLNENDIIFIASGVKHRLIAPDTGKRL-ILQIEWS 92 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 ++ + + + + + + N +L Sbjct: 93 AVSKIKELNSILTLIAPAITLTPETSGDIHSNIRKLLLDISNEYQTDSFLSEAVIYSKIL 152 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ---MLGFIAENYDQALTINDVAEHVK 218 + L G + S H N Q Y+ + + +I + + +T++++A+ Sbjct: 153 EVLVLIGRH----HTASSCHFNVGRHKQQEYLERFLSICEYIDTHCTEDITLDEIAKIAG 208 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 + + +F++ T +Y+ RI LL+D + S+ + A+ +GF + S F F Sbjct: 209 FSKYHFTRLFKQFTNNTFYKYLNQKRIELALTLLADPNISVTETAMQSGFANPSTFIRVF 268 Query: 279 GKYVGMSPQQYRKL 292 G +P ++RK+ Sbjct: 269 KTEKGCTPTEFRKM 282 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 93/256 (36%), Gaps = 12/256 (4%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ---SMAIFNL 98 HWH +E+ G + +G I +F T H L + IF Sbjct: 37 HWHESMELVFVKQGMGLVQVGVVTYPAYRGDIFIFAPGTLHALRQAEGQRMEYENIIFEP 96 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKS--LATQQLSPFEVRRWQQELNSPNEQIRQLAIDE 156 + + + + G + L L + +EL N R Sbjct: 97 ELLGGAEDLCAEKYLLPLQSGRLSLPVRLTPNDLCYLQAAACLRELEDANRAKRPG---- 152 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 L++K L ++ + + +L +++ +Y + L + D A Sbjct: 153 YELLVKGALLRFLALLIAQGRQCLSTETADTQ---RLKTVLQWLSAHYAEPLRVADAAGV 209 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 +A++ M F+++ + ++ R+N L TD+++L IA GF + S F Sbjct: 210 CSFSASHFMRWFRQMTGQSFIAFLNEYRLNTAAEALRTTDETVLTIASRCGFENLSYFNR 269 Query: 277 TFGKYVGMSPQQYRKL 292 F + GM+P+ YRK Sbjct: 270 AFKAHFGMTPRDYRKK 285 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 103/281 (36%), Gaps = 20/281 (7%) Query: 23 SEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH 82 + + P + H H E+ G + + + G + L H Sbjct: 15 NHSFFFIDQRTEPSLEAKLHRHDAWELYYVVHGQGNRMAGDTLQHFEAGDVALIPPSMLH 74 Query: 83 -------QLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEV 135 + G + + + + S + +L N + V+ + P V Sbjct: 75 RWEYAADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRL--ADVMFPTDALKFGPESV 132 Query: 136 RRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSR--HAQFYV 193 R ++ L+ N +DE+G + F L P++ + R + Sbjct: 133 RVIRKTLSEMN------GMDELGRLSAMFRL---LPVIFTSSDHIFAGKPMRIEKNVRRM 183 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 Q+ ++ ++Y ++ ++D+A V +N + F+R +T Q++T R+N LL Sbjct: 184 QQICAYVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLK 243 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 + K + +I GF F F +GM P +YRK + Sbjct: 244 HSQKGVSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRKQFK 284 >UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0C8_RUMGN Length = 301 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 115/281 (40%), Gaps = 15/281 (5%) Query: 22 YSEYQRMEIE---FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWA 78 YSE + + +E + + M ++H+H + E+ +G+ + NN + +G + L Sbjct: 7 YSEMEGISLEHLKRSSGYDMRSNHFHNEYEIYFLTEGERLFFFNNRAYQVKKGSLILVDT 66 Query: 79 CTPHQLTDTGTCQS------MAIFNLPMHLFLSWPLDKDLINHV--THGMVIKSLATQQL 130 H + + I M F +L+ +G+ + Q+ Sbjct: 67 NLIHMTHAPEDDTTGYTRIILYIDKFKMQQFDEKFPHLNLVPFFREHYGVYNLTQKQQEK 126 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 + E ++ + + L EI F E + + HK+S Sbjct: 127 FLHMYEVLKTEFSNRSRSYKALIEMEIIHYFIDFIRDNPELTPIKDETAIHKSS----KY 182 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 + + +I+++Y ++++++ +A L+ Y F+ V + +Y+ +R + Sbjct: 183 QTIYNIADYISDHYAESISLDGLAGVFYLSKFYLSRSFKEVTGYGVNEYVNILRTKRAKQ 242 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 LL +T S+ +IA T G+ S + F F Y+ +SP +YRK Sbjct: 243 LLEETTLSVSEIAGTVGYESITYFEKVFKTYMSISPLKYRK 283 >UniRef50_C0WE40 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WE40_9FIRM Length = 283 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 101/254 (39%), Gaps = 6/254 (2%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI-FNLPM 100 HWH ++++ + GD+ ++ ++K ++ G + A H++ + + NL Sbjct: 28 HWHEKIQILLAIQGDMAVMLTDQKFELHPGEGLIMNAGQLHRVIPRQQKSGILVCLNLSP 87 Query: 101 H---LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 L +D++ + T ++ L P+ + + I++ Sbjct: 88 SALGLRSGSYMDRNFVEPYTKNPEFTAVHLHPLIPWCKKLMDE--VQGAYLIKRGGETAY 145 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 + L W + N T K S S Q ++GFI +Y + I D+A Sbjct: 146 EVDLMSVMYRIWSLFIKNVTFTKAKKSTSARHQSITKTLMGFIKAHYHENFAITDLAAFT 205 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 + + IF+ + T+ Q++ R+ LL +T+ + +A GF S+S F Sbjct: 206 SYSGSECCRIFKETVHETIYQFLNKYRLEKAAVLLRNTELPVSAVAQRTGFSSTSYFIKC 265 Query: 278 FGKYVGMSPQQYRK 291 F +P Q+RK Sbjct: 266 FKLQTMRTPLQFRK 279 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 93/255 (36%), Gaps = 7/255 (2%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH + E + +G +K + QG A H C + ++ H Sbjct: 42 HWHDEFEAVIVSEGTALIAAGTKKYTLKQGEGIFINAGILHAAWS-KNCSICHLHSITFH 100 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE----- 156 L + H ++ + + + W +E E +E Sbjct: 101 PRLIGGSIDSIFWHNYVQPLLTNPIVKHIHLDSSEAWHKEATHAIESAWNSCANEPFGYE 160 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 + L SR V R++ + ML FI ++Y + ++ +A+ Sbjct: 161 FQVHSSLSQLILHLSAYHPVISRQPSEKVLRNSN-RLKLMLQFIQDHYHDQINVSMIADT 219 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 ++ + + F+ ++ + QY+ RI L+ T+++I I GF+ +S F Sbjct: 220 AMISESECLRCFRNIIGIPPIQYLKQFRIQKAVEFLTSTNETITKIGAKCGFQDTSYFVK 279 Query: 277 TFGKYVGMSPQQYRK 291 TF + +P +YRK Sbjct: 280 TFREQKKCTPSEYRK 294 >UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostridiales RepID=C4ZFS6_EUBR3 Length = 293 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 103/278 (37%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQG 71 +K+ ++ Q+ A + + T+HWH + E+ + G Y I+ + +G Sbjct: 11 QKENAKHGEVFFPVQKYITRLAADYPVITTHWHDEAELTLITKGSCTYQIDLLEYEAKEG 70 Query: 72 HITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLS 131 I H ++ + + + FL + ++ A L Sbjct: 71 DIIFIPPLLLHSISIRDCDEFYSETYVFHINFLGGNNTDICSSRYLTPLINHEFAMPYLI 130 Query: 132 PFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQF 191 + + + E L + L+ + S + + + Sbjct: 131 APKHPAYSSLCKCFMRITNLYSRQEFAYELALKAFLLQAIFLLLQYSEKNADFGVNTSSD 190 Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 + +L +I +Y +++ + ++A + + M F++ M +T QYI +R+ Sbjct: 191 KLKNVLDYIDVHYAESIQVAELAGLCYFSEYHFMRFFKKHMNMTCVQYINNVRLEKSVEQ 250 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQY 289 + SILD++L+ GF + S F+ F K M+P + Sbjct: 251 FERGNTSILDVSLSVGFHNLSYFHRAFKKRYHMTPLSF 288 >UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=Clostridium RepID=A5I5L7_CLOBH Length = 688 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 97/260 (37%), Gaps = 4/260 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH +EV +G ++ I E +N+ I + H + + IF + Sbjct: 27 HWHNAMEVIYVLEGSIKITIETESHRVNKQEIGIINPEEAHSIKSITNNNKVLIFQIDTS 86 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 F + D+ N + A + +R++ L Q D + +L Sbjct: 87 FFNKYY---DIENMFFYTDFSAPEAQKHEKYDVLRKYLSTLLCEIAQKGDNYEDVVEEIL 143 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNA 221 + Y +++ +I NY+ ++I D+A L++ Sbjct: 144 VDLLYHLINNFHYLIYDEEELKENEVQFERY-DRIIKYIYSNYNNKISIQDIARLEFLSS 202 Query: 222 NYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKY 281 +Y + + + ++ R+ LL DTDK+I +I+ GF + F F K+ Sbjct: 203 HYLSNEMKNKVGYSFNDFVNLTRVEEAIKLLLDTDKTISEISEELGFSHTRYFNKHFKKH 262 Query: 282 VGMSPQQYRKLSQQRRQTFP 301 +P QYRK + +T+ Sbjct: 263 YKCTPMQYRKKYKVDEETYE 282 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 100/283 (35%), Gaps = 13/283 (4%) Query: 25 YQRMEIEFRAPHIMPT------SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWA 78 ++ + F HI+P HWH +E+ G+ + I +E V G + Sbjct: 13 HRDQDFPFDVFHIIPPGKEVLHLHWHDDLELIYFIRGNATFYIGSETVKPEPGDLMFVNK 72 Query: 79 CTPHQLTDTGT---CQSMAIFNLPMHLFLSWPLDK-DLINHVTHGMVIKSLATQQLSPF- 133 H +F+ + + N G + + Sbjct: 73 GMIHTGFADDEHQVEYYALVFHSVLAESRVAGSSHVQITNPYASGKRFFPILLPVTDAYN 132 Query: 134 -EVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY 192 + +++ + EQ I ML + ++ + + ++V Sbjct: 133 SLIAGIVKQMIAEYEQQAIGYQVAIQSMLHLLLVHLSRHHHLHGPTGSA-DTVGAELTDR 191 Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 +++ F+ +Y + LT+ A V L+ + F++V T +Y+ +RIN LL Sbjct: 192 FKELIAFVERHYPEKLTVQQAAGIVNLSEYHFCRTFKKVTGKTFVEYVNLLRINAAEQLL 251 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 + I +IA GF S + F F +Y SP Q RK + Sbjct: 252 IHSSDPITEIAFKVGFGSVNYFSQMFRQYKRHSPSQCRKRYAR 294 >UniRef50_A6WDN9 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDN9_KINRD Length = 282 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 70/277 (25%), Positives = 111/277 (40%), Gaps = 16/277 (5%) Query: 20 SLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWAC 79 +L + + + M H H +EVNV G +EYL+ E+V++ +G +FWA Sbjct: 6 ALTVVEPALWVHRGSAPPMREFHRHDDLEVNVALRGSLEYLVGGERVSVPEGSTAVFWAA 65 Query: 80 TPHQLTDTGTCQS--MAIFNLPMHLFLSWPLDKDLINHVTHGM--VIKSLATQQLSPFEV 135 PH+L + + +LP+ + L W L V V+ + Sbjct: 66 APHRLLSSDGPRDSDTCWVHLPLAVVLRWSLPAAFSATVMSQRTVVVPTAVIGPHVEGLF 125 Query: 136 RRWQQELNSPN--EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV 193 WQ++L P E + + E M+ R R V Sbjct: 126 TTWQRDLAHPRGAEPDTEAMLLEANAMVLRIL----------GHRGPAPTPRPRPDLRPV 175 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 + M + AEN+ ++ D+A LN NYA +F+R +T+ + RI + LL Sbjct: 176 ALMARYTAENFRDRISAADIARAANLNPNYATTLFRRATGVTLGDQLLRHRIAEAQRLLL 235 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 T + +A AGF S S Y+ F + G SP YR Sbjct: 236 TTSMTTAAVAHAAGFGSGSSLYAHFARACGCSPGAYR 272 >UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHV0_9FIRM Length = 309 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 12/263 (4%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT----DTGTCQSM 93 M +H+H + E+ + G + N G++ L + H D T Sbjct: 37 MRYNHFHQEYEIYLLLRGRRQMFFENRAYEAQAGNLILVDSGQIHMSHSIVGDPETEYER 96 Query: 94 AIFNL-----PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQ 148 I + + L H +G+ + + + +EL+ Sbjct: 97 VILYVDRDIVEKVDKMFPELKIGAFFHKHYGIYELTPKQTANTRRLFLQIMEELDKAEPM 156 Query: 149 IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQAL 208 + + E+ L F S + +N + S V Q+ +I++++ + L Sbjct: 157 SQTAILSELILGFIYFRRSNQQVACLND---VQEGKASGGKFDAVYQISDYISDHFQERL 213 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 +++ +AE ++ Y F V + +YI +R+ ++LL T S+ +IA GF Sbjct: 214 SLDSLAEQFYISKYYLSRSFHEVTGFGINEYINILRVKKAQSLLETTTLSVSEIASRTGF 273 Query: 269 RSSSRFYSTFGKYVGMSPQQYRK 291 S + F KY ++P QYRK Sbjct: 274 ESITYLGRVFKKYQHVTPAQYRK 296 >UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 Tax=Clostridiales RepID=C4ZF37_EUBR3 Length = 291 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 100/256 (39%), Gaps = 7/256 (2%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD-TGTCQSMAIFNLPM 100 HWH +E+ G ++ ++ ++ + L H + + Sbjct: 39 HWHDDMELIYIKKGCGHISVDFKEYHVTAPSLVLILPGQLHSIDQYMDESMEYENIIFSL 98 Query: 101 HLFLSWPLD---KDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 + L D +D + + G + P+ +++ +E + + Sbjct: 99 SMLLPGKYDYTKEDFLTPLLAGRFTVPTVFTPVYPY-YEDVVAPIDACDEICKTMP-QGY 156 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 L +K L + +L N+ K S+ + +L ++ NY ++I D+A+ Sbjct: 157 QLYIKS-KLYEFFFVLDNRCRNLTKPLKSKKTLDKMKVVLKYVENNYADKISIADIADVA 215 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 + ++ M F+ M + Y+ R+ LL +D S+L I+ GF S S F Sbjct: 216 GFSESHFMRYFKETMGTSFVDYLKDYRLTMAARLLQSSDSSVLSISGEVGFESLSYFNRA 275 Query: 278 FGKYVGMSPQQYRKLS 293 F K+ GM+P QYRK S Sbjct: 276 FKKHYGMTPLQYRKGS 291 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 108/269 (40%), Gaps = 3/269 (1%) Query: 29 EIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG 88 E + HWH E+ + G +++ E +++ G + + H + Sbjct: 29 GGESHPHDVTEIEHWHDFCELAMVTGGRGVHVLEGESFHVSTGDVFVLQGRQVHCFRERQ 88 Query: 89 TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQ 148 + + P L L L + L + M+ + + +R ++EL S Sbjct: 89 GLALINVMYDPERLPLPLGLLRRLPGYSALFMLEPTFRSTHRFSSRLRLARRELGSAEAI 148 Query: 149 IRQLAIDEIGL-MLKRFSLSGWEPILVNKTSRTHKNSVSR--HAQFYVSQMLGFIAENYD 205 + ++ + L L+ SR + S +R HA V Q++ + + + Sbjct: 149 VERIENESKAAQEGHEAVLLSLLVELMVLLSRHYAQSDTRESHALLQVGQLVSMLEQRFG 208 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + T+ +AE +++ + + +F++ + ++ +RI R LL +D + +IAL Sbjct: 209 EPWTLEQLAEQARVSRSNLLRMFRQATGQSPIDFLIGLRIEAARRLLRRSDLGMTEIALE 268 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 GF + F F K G++P YR+ + Sbjct: 269 CGFSDGNFFPRQFRKTCGVTPSIYRRQMR 297 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 95/255 (37%), Gaps = 15/255 (5%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH-QLTDTGTCQSMAIFNLP 99 H H E+ G + I +++ + + + L PH + + + Sbjct: 36 EHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQPWEYIALGIE 95 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGL 159 F + V + P+ + +E+ + E + + + + L Sbjct: 96 GVQFQYSEKEAPY-----SYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQTICQNLLEL 150 Query: 160 MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 +L + S + L +T + + +I E+Y + +T++ ++ V + Sbjct: 151 ILLSVARSTRQEFLSAPRQKTTREC---------RLVEQYINEHYHEDITLDTLSALVHI 201 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 N Y + F+ ++ Y+ R+ R LL T+ S+ I +GF S S F TF Sbjct: 202 NKYYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFR 261 Query: 280 KYVGMSPQQYRKLSQ 294 + G +P YRK + Sbjct: 262 RLTGTTPNAYRKKKK 276 >UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A3T9_ENTGA Length = 296 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 99/274 (36%), Gaps = 10/274 (3%) Query: 32 FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ 91 R HWH + E+ +G+ +LI + I G + + H Sbjct: 22 RRDSIYNMVKHWHSECEIQYFIEGNRYFLIGEKTYKIQPGTLVMIHPDCVHNTFSGKYIY 81 Query: 92 SMAIFNLPMHLFL-----SWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPN 146 + L S +D + HG++ A + + + E+ Sbjct: 82 HDRVLVLYEASKFPRIAQSMGIDLETFFLKHHGIIQIPPADRSYVQTLLAKIADEVIHKE 141 Query: 147 EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 + + ++ + L ++ + + V+Q+ FI NY Sbjct: 142 YNYQVMVETKLIELFIFIQRIKNFRGLSDEPAESLG-----KQSELVNQIAAFIRRNYAS 196 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 ++ +A L+ +Y IF+R T+ +Y RI + LL DTD I +IA + Sbjct: 197 IHSLEQIASSFYLDKSYLCRIFKRATGYTITEYTNIQRIRQSQRLLEDTDWDIAEIARKS 256 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 G+ + + + F KY SP QYRK +++ Sbjct: 257 GYSNITYYNRVFKKYTETSPLQYRKKQIAYKESL 290 >UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B4_EUBE2 Length = 291 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 99/256 (38%), Gaps = 9/256 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT-DTGTCQSMAIFNLPM 100 HWH ++E+ G + ++ E +N G I + H + + + Sbjct: 39 HWHNEMELIYIKKGCMIVSVDLEYSVVNAGDIVVVMPGHIHSIIQNESDSCEYENILFNL 98 Query: 101 HLFLSWPLDKDLINHVT-----HGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID 155 + +S D D ++ +G ++ ++ + E ++ + Sbjct: 99 DMLVSRQCDYDTVSFFNGIAGFNGYCPPVISKTAPHYSDLIHYIDEADNICKYFPDGYRL 158 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 +I L F + H +S + +L +I +N+ +A++I ++A+ Sbjct: 159 KIRACLFNFFFELNAHFYTHTDMPVH---LSDDKMDKLKLVLNYIEKNFARAISIEEIAQ 215 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 + ++ M F+ + Y+ R+ +L T + ++ +A GF + S F Sbjct: 216 WCHFSQSHFMKFFKNCTGTSFITYLNDYRLIIAARILKTTTQPVIIVASDCGFDNISYFN 275 Query: 276 STFGKYVGMSPQQYRK 291 F + G+SP+++RK Sbjct: 276 RKFKEKYGVSPREFRK 291 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 103/255 (40%), Gaps = 10/255 (3%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP 99 HWH ++V +G N + NI QG + + + H L + + Sbjct: 34 KEHWHEHLQVFYFINGKGFLRCNTKSFNIIQGDVIIINSRDLHYLESLNNDLRFYLIRID 93 Query: 100 MHLFLSWPLD---KDLINHVTHGMVIKSLATQQLSPFE--VRRWQQELNSPNEQIRQLAI 154 + S +D ++ ++ +++ + ++ +E N E +LA+ Sbjct: 94 LPFLFSDQVDLCQTKYLSPLSENLILFKNLIRNDDEIVRCIKTIIKEYNKK-EIGYELAV 152 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 L + + ++K + + + ++ F+ N+++ ++ +++ Sbjct: 153 KANLYNLVVLLIRNY----IDKFVTKRQLAFKINNDERFYKVFEFVHSNFNKKISTLNLS 208 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 ++ Y IF+++ T +YI +R+ LL +++ +I ++A+ GF + F Sbjct: 209 NIAHVSPYYFCRIFKQITGKTTTEYINEVRLKKSIELLKNSNMNITEVAINCGFNDVNYF 268 Query: 275 YSTFGKYVGMSPQQY 289 F K G+SP ++ Sbjct: 269 SRLFKKKYGVSPTKF 283 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 100/263 (38%), Gaps = 16/263 (6%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ-SMAIFNL 98 T+H H E+ G+ ++ + + + + + H + + Sbjct: 35 TTHTHSCTELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGV 94 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 FL D + + ++ + E + + + D + Sbjct: 95 ASMEFLFSKADTNY-------AIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLE 147 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 ++L W + + + + + + + +++ ++ NY + ++++ +AE Sbjct: 148 VLL------IWLVRCTTISLQLEEAAPTENREC--AEIKRYLDTNYREDISLDLLAELAH 199 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 LN Y FQR ++ Y+ RI + +L +T S+ I+ GF S S F F Sbjct: 200 LNKYYLAHTFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPSYFSQCF 259 Query: 279 GKYVGMSPQQYRKLSQQRRQTFP 301 K GM+P +YR+ ++Q ++ P Sbjct: 260 RKAEGMTPNEYRRQTRQGKRPAP 282 >UniRef50_C4Z7H0 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=8 Tax=Bacteria RepID=C4Z7H0_EUBE2 Length = 303 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 94/256 (36%), Gaps = 2/256 (0%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH VE+ G +EY + K+ G + + H + Sbjct: 45 HWHRTVELFYMESGSIEYDTSGGKILFPAGSGGMINSNVLHMTKAISQKEKNIQLLHIFD 104 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG--L 159 + L I +I + + F ++ + +++ DE G + Sbjct: 105 VSLLAGEQGSRIEQKYITPIITVPQIEVIPLFPGNAEEERILKLLAASFRISSDEFGYEI 164 Query: 160 MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 L+ W + S K + + M+ +I E+Y + L+I+++A L Sbjct: 165 KLREALTEIWLMLFELSRSMREKKGEHNKSNDKIKLMMIYIHEHYREKLSISELAAAAYL 224 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 + +F + +T +YIT R+ +L+ + + I+ G SSS F F Sbjct: 225 SERECYRVFHDCLHMTPVEYITTYRLQIACQMLAKGQEPVTVISHECGLGSSSYFGKVFR 284 Query: 280 KYVGMSPQQYRKLSQQ 295 +Y SP +YRK Q Sbjct: 285 EYAHCSPIEYRKKWQN 300 >UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NUZ5_BACSE Length = 305 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 14/260 (5%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSM-------- 93 H+H Q E+ + + ++G + LF PH + Sbjct: 48 HFHSQYEIIYVKKSCGRCFVGDCIECFSEGDVVLFGPSLPHYMRSDDAYHGDNPRLRVQG 107 Query: 94 AIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLA 153 I + F+ + D +++K + +++ S +++ Sbjct: 108 TIIQFEEN-FMQYSFDH-YPQFHQIRVLLKEARRGVVFHTADAGAVRDMVSAFPELKGFG 165 Query: 154 -IDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 I + +L+ ++S +L + + + +++ FI NY ++L +++ Sbjct: 166 QITGLLDLLQALAVSVPRRMLASPCYYEKFPTA---GNKRIDKIISFINSNYTRSLKLDE 222 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 +AE +N++ F+ T QY+ MRI + LL+ D I IA+ GF S Sbjct: 223 IAEMANMNSSAFCRFFKDATGKTFLQYVADMRIGYACKLLTIGDMEISQIAVECGFDSIP 282 Query: 273 RFYSTFGKYVGMSPQQYRKL 292 F TF + G++P QYR Sbjct: 283 HFNRTFKQLTGLTPTQYRNQ 302 >UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ07_CALS8 Length = 283 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 9/252 (3%) Query: 44 HGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLF 103 H E+ G++E+ + +EK+ + G + + T H+ G ++ I F Sbjct: 31 HDSYELIFVKKGNIEFWVEDEKIELRAGDLLIIKPHTRHKFEVVGNFKAEFIV----MGF 86 Query: 104 LSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELN---SPNEQIRQLAIDEIGLM 160 P K I + SPF ++ N +++ ++ GL+ Sbjct: 87 YLKPESKSKIEALKEIYGFLESLENISSPFYFIHIRKRSNVFFCLESILQEAKENKKGLL 146 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 L S+ + I + + + + +I +NY + + I D+A+ + ++ Sbjct: 147 LYIKSIELF--IYITREMNNLEIKKGFDYSKIAKFIKDYIDQNYMEDIKIGDIAKKLFMS 204 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 + +F+ + K+Y+ + RI + LS ++ I +IA+ GF S RF F K Sbjct: 205 ESSISRLFKSQFGILPKEYLLSKRIEKAKEYLSVSNLKISEIAIMCGFSSLQRFNDIFKK 264 Query: 281 YVGMSPQQYRKL 292 Y G SP YRKL Sbjct: 265 YTGCSPTHYRKL 276 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 106/257 (41%), Gaps = 14/257 (5%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT--CQSMAIFNLP 99 H+H ++E+ G+ + I + QG + L + PH S ++ + Sbjct: 38 HYHPEIELVYVNGGNGKRQIGSHVSYYTQGDLILIGSNLPHCGFTDACTGNTSESVVQMK 97 Query: 100 MHL----FLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID 155 F S P +++ +A + ++ + L ++ R LAI Sbjct: 98 TDFLGSDFFSIPEMRNIRQLFEKAK--GGIAFTGSAKKKIGEKIEILEYKSDFQRLLAI- 154 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 + ++ + S S ++ + S + ++ + F+ ENY + +++ ++A+ Sbjct: 155 -LNILNELGSTSEYQILNAEHLSVETQ----SKENERINSIFNFVKENYREPISLEEMAD 209 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 + F++V T Q++ R+ H LLS+ + SI +I +GF + S F Sbjct: 210 LTHMTVPSFCRYFKKVTNKTFVQFVNEYRMVHASNLLSENEMSITEICFESGFNNFSHFN 269 Query: 276 STFGKYVGMSPQQYRKL 292 +F + GMSP +YR Sbjct: 270 KSFKAFTGMSPSEYRNQ 286 >UniRef50_A9VTW6 Transcriptional regulator, AraC family n=9 Tax=Bacillus cereus group RepID=A9VTW6_BACWK Length = 293 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 104/256 (40%), Gaps = 12/256 (4%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 H HWH +E+++ G+V +N +K ++ G + H+ + Sbjct: 34 HYYIPPHWHRSIEISLVVYGEVFLYVNGQKKKVSAGEFIFVNSGDVHEFEKVKNTSCAVM 93 Query: 96 FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID 155 + + FL + + IK Q+ + ++ +EL + ++ + + I+ Sbjct: 94 MLIISYEFLKEVNG----DFDKYRFNIKESVVQKTNLQQIFYELKELVTNSDDLSYIKIN 149 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 + + IL+ + +M+ +I ++YD+ L + DVA+ Sbjct: 150 SL--------IYEIVYILLRYCKEGESIDNNYQLGNKQKEMITYIYKHYDEELKLKDVAK 201 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 + ++ + +F++ ++T R+ + ++ SI DIA+ GF + F Sbjct: 202 YFFVSEEHFSRMFKKSFGSNFTTFLTRYRLYKAYEDIINSTNSIQDIAVKHGFPNVKSFI 261 Query: 276 STFGKYVGMSPQQYRK 291 S F + G +P QYRK Sbjct: 262 SQFKEKYGYTPLQYRK 277 >UniRef50_UPI0001C3636B helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3636B Length = 274 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 104/266 (39%), Gaps = 7/266 (2%) Query: 32 FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ 91 F HWH ++E G + ++ +++G + + H +T Sbjct: 13 FYKDEFSSKKHWHKEIEFTYLVTGKLIICVDEVMHELHEGELFVVSGGVVHYYIETEEKY 72 Query: 92 SMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQ 151 + I + + F + + G L + +++ +++ + + + Sbjct: 73 KVGIAKMSLQAFDGF---SKKVKDFFRGFYSSVLYVAKDD--QIKTIFRDIINLISK-QN 126 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 + I E L+ + L+ + + + A+ + +M + AE+Y++ + + Sbjct: 127 IVIQESVLISRIIDLTVYLSSHEELIKNREEYRKNSDAE-LLERMRTYFAEHYNEKIGLA 185 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D+A H+ + +Y ++ + +Y+ + RI LL T+ S+ +IA GF S Sbjct: 186 DMASHLGFSESYCSKYIKKKTNMNFLEYLNSCRIMRAETLLRTTENSVTEIAYAIGFTSI 245 Query: 272 SRFYSTFGKYVGMSPQQYRKLSQQRR 297 F F + SP +YRK ++ Sbjct: 246 QSFNRVFKSFCDESPTEYRKRLHDKK 271 >UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZJ5_9BACL Length = 310 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 108/275 (39%), Gaps = 17/275 (6%) Query: 24 EYQRMEIE-----FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWA 78 + +++ E +++ +I H+H ++E G + +N E + QG + + + Sbjct: 42 QNWKLDPELPMDIYQSTNITFYPHFHAEIEFIYVLSGTIRIGVNEEIRLLRQGDMVICGS 101 Query: 79 CTPHQLTDTGTCQSMAIFNLPMHLFL---SWPLDKDLINHVTHGMVIKSLATQQLSPFEV 135 H + I SWP D + L T + E+ Sbjct: 102 NDIHYFDSRELESEIIILICKPEWITMTKSWPSDFRFASPYIPAGT-PGLETVKTILDEL 160 Query: 136 RRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ 195 R + E + + I ++ L+R + + +++T++ S + + Q Sbjct: 161 IREKDEKKPGYPLLLKAGILKLCGSLQR----AVDTLPMDRTTKEKYES----RRARMQQ 212 Query: 196 MLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT 255 +L +I ++Y + L + +A+ + ++ F+ + + K Y+ +R+ L + Sbjct: 213 ILSYIEDHYREELNVKVMAKRFSMEPSHFSRSFKAAIGMNFKTYLNTVRVLSAEHQLLTS 272 Query: 256 DKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 D SI++IAL GF S F F + G P R Sbjct: 273 DLSIMEIALECGFSSIRTFNRVFKELRGTVPSSLR 307 >UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR68_9FIRM Length = 301 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 101/257 (39%), Gaps = 9/257 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH +VE G ++L+ + ++ G + H+ T S I N+ Sbjct: 47 HWHPEVEFVYVQQGMADFLVGGNRYVLSSGDGIFINSQVIHRFEATD---SAIIPNIVFS 103 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEV--RRWQQELNSPNEQIRQLAIDEIGL 159 L P + + ++ + S E R + + S E+ Sbjct: 104 PVLLAPQGSLIYSRYIRPIIESTTECVIFSAEETAHRSIIETMRSVFAVQGSGTASEMKT 163 Query: 160 --MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 +L + +E IL+ +S A+ + M+ +I +NY +T++D+A V Sbjct: 164 AELLLKLWRLLYESILITDCGSMSVHSAQTQAKLQI--MMQYIHDNYSGQITLDDIARTV 221 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 ++ + + IF+ + + Y+ R+ LL DT+ S+ IA GF + F Sbjct: 222 LISKSSVLNIFRTYLHTSPINYVVEYRLKCASKLLVDTENSVCTIAHETGFENIGYFCRR 281 Query: 278 FGKYVGMSPQQYRKLSQ 294 F K G++P YR + Sbjct: 282 FKKLYGVTPIYYRNHGR 298 >UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BH94_9GAMM Length = 305 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 100/261 (38%), Gaps = 20/261 (7%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 H H E G + +N+ + ++ G + A H + Sbjct: 28 HRHQATEALWVLQGAIRVQVNDHQYSLRDGDLLFINADDHHATEAASDDNLVLCLQHRFE 87 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI-RQLAIDEIGLM 160 L + T V+K+ + W+Q+ + Q+ + + ++ L+ Sbjct: 88 -----ELVNVSVAPGTSNPVLKARLNDLRTTLAHLWWEQKYQPAHWQLATENGLAQLQLI 142 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 L R+ ++ A + + Q+ ++ +Y + +++ ++EH L+ Sbjct: 143 LLRYF----------SSASPAPAESRDDASWRIQQITRYLEAHYREPISLTSLSEHFGLS 192 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 Y F+ T+ +++T +R+ L TD ++ ++AL GF S F S F + Sbjct: 193 ETYLSHYFKDKTGSTLVRWLTQLRLERCLPDLIQTDSTVAELALEHGFPSIKAFNSAFKR 252 Query: 281 YVGMSPQQYRKLSQQRRQTFP 301 +P ++R Q++Q+ P Sbjct: 253 EYQCTPSEFR----QQQQSAP 269 >UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G478_ABIDE Length = 299 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 10/255 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ--LTDTGTCQSMAIFNLP 99 HWH ++E+ + +G V I N +N+G + H L Q IF+ Sbjct: 42 HWHDELEIIIITEGSVSVQIANSSFVLNKGEGYFLNSGILHSAKLLSPKGHQRALIFSPE 101 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE---VRRWQQELNSPNEQIRQLAIDE 156 + + K I + + + ++ +R + + I Sbjct: 102 IAAHNEDIVWKTYIKPIFKKQALPFIKLSPGISWQNSILRLSNDVWLTGAYEKTDYPITV 161 Query: 157 IGLMLKRFSLSGWEPILV-NKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 + K FSL L+ N+T THK ++ + + ++L FI NY +TI D+A+ Sbjct: 162 RHNLTKVFSLIKSNIDLIENETEFTHK---TKQDELRIKKILFFIENNYSTTITIADIAK 218 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTD-KSILDIALTAGFRSSSRF 274 ++ + + +F+++++ T QY+ R+ + +SI DIA + GF ++ F Sbjct: 219 SGDISISSCLRLFKQILKTTPIQYLIKYRLQKAVEEFDSLEGRSIGDIAYSCGFSDATYF 278 Query: 275 YSTFGKYVGMSPQQY 289 F K G +P +Y Sbjct: 279 NRCFKKEFGCTPTEY 293 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 105/283 (37%), Gaps = 9/283 (3%) Query: 16 RSPLSLYSEYQRMEIEFRAPHIMPTS-HWHGQVEVNVPFDGDVEYLINNEKVNINQGHIT 74 + ++ E + + S H H +E++ +G +N E + G Sbjct: 2 EQQMKMFQEDRNLPFSVYIAQDEKFSWHCHKHMELDYCSEGHCTIKVNGESYDCQPGDFV 61 Query: 75 LFWACTPHQLTDTGTCQSMAIFNLPMHLF---LSWPLDKDLINHVTHGMVIKSLATQQLS 131 + H L C+ + + + + + S + + G + Sbjct: 62 IIHTMEDHTLIRNSDCKLLGV-QMDLSVLDTAFSPFYESQYLVPFIRGSGKYQRRIRVPK 120 Query: 132 PFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQF 191 + E+ ++ + + +K L + ++ K + +V+ Sbjct: 121 GSLLESILSEILVEYQKKQPG----YEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDLE 176 Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 + ++ ++ ++ + L++ A+ ++ + +F++V+ T +Y +RI L Sbjct: 177 RIKPVIDYMEQHIETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEKL 236 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 L TD++I +IA GF S + F F K G +P YRK + Sbjct: 237 LITTDRTITNIAFETGFGSVAYFNRVFKKETGQAPANYRKKMR 279 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 103/256 (40%), Gaps = 7/256 (2%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH +E+N G Y+IN +K QG + L + H +T I Sbjct: 39 HWHNVLEINYIKSGMGYYIINGQKFEFQQGDVLLINSNDLHCAYETKDLVMTVISFDSTW 98 Query: 102 LFLSWPLDKDLINHV----THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 + D +L + H M + + ++ + EQ + Sbjct: 99 FIHNLRFDPELFSPFREMGKHYMNLIPRDHPAMGKLRSLLFELQEEHVGEQRSYATVV-Y 157 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 L+L+ + + + + + S+S + Q++ + +N+ T+ ++A V Sbjct: 158 SLLLQFLATVNRQCRIEGEGG--SEPSISERQLEKMRQVIMVMEQNFAHPWTLEELASLV 215 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 L+ + IF+R + + Y+ +R+ +L ++D+AL GFR+ + F Sbjct: 216 YLSPSRFSEIFKRAVGMPPLLYLIHIRLEQAVTMLEGGHMKVMDVALECGFRTLTNFNRL 275 Query: 278 FGKYVGMSPQQYRKLS 293 F K++GM+P+ +K Sbjct: 276 FKKHIGMTPKASQKQH 291 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 104/255 (40%), Gaps = 4/255 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT-DTGTCQSMAIFNLPM 100 H+H E+N+ + E ++ + + + + PH + + Sbjct: 32 HYHSDYEINLVMNTYGERIVGDSVEKFDNLDLVMTGPNLPHAWKGEIVEGNHVVTIQFSD 91 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 L L+K L + + +++ S S + ++++ + E + Sbjct: 92 KLLNFPILEKRLFSPIKQ-LLLDSQKGISFSENTMLAMKEKILQLTRMQGFHTVLEFLSI 150 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 L S + ++ N K+++ ++++ +I +N+++ + + DVA V ++ Sbjct: 151 LYDLSTADRHILVSNLYD--TKDTIRTSKSRRIAKVCDYIEKNFEEPIKLGDVAALVNMS 208 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 + F++ T YI +R+ +L++T ++ +I + GF + S F F K Sbjct: 209 ESAFSHFFRKKTNCTFIDYINNLRVARACQMLTETSHTVAEICYSCGFNNLSNFIRIFKK 268 Query: 281 YVGMSPQQYRKLSQQ 295 G +P +YR + QQ Sbjct: 269 KKGNTPSEYRTILQQ 283 >UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/XylS family) n=2 Tax=Bacillaceae RepID=B1HRT8_LYSSC Length = 294 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 5/252 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH +++ G +Y + + + +G H+ + ++ + + Sbjct: 45 HWHKEIQFVYLKSGCAKYRVGANVLVLEEGEGLFINTSELHEAKPFQ-MEHAIVYCINVD 103 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 + D + V L T + ++ + + + I Q L + Sbjct: 104 PIIIGGHDGSI---FMTNYVQPYLTTHRQPYLKLTKELTQKVACMADILQKQEAFYQLKV 160 Query: 162 KRFSLSGWEPILVNKTSRTH-KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 R L WE +L + Q ML F+ +Y Q +T+ D+A+HV L+ Sbjct: 161 WRELLYIWEVMLTQSLLTEEIVDPSIIVQQERAKAMLNFLHTHYQQKITLEDLAKHVYLS 220 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 F++V+ LT Y+ R+ LL D ++++ IA GF + S + F + Sbjct: 221 RAECSRYFKKVIGLTPFTYLLQYRLRKSIELLRDDEQNVTIIAANTGFSTVSYYIEKFKE 280 Query: 281 YVGMSPQQYRKL 292 Y G SP YRK Sbjct: 281 YTGYSPHVYRKK 292 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 109/290 (37%), Gaps = 18/290 (6%) Query: 6 FMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEK 65 M +S + PL + Y+ ++ H H VE+ +G + I E Sbjct: 9 VMSASSFFEPGVPLYVNRAYESFDM---------GEHSHEFVEITYVSEGAGIHYIAGEA 59 Query: 66 VNINQGHITLFWACTPHQLTD--TGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIK 123 V + G + H + + ++N L +L + + I Sbjct: 60 VPVEHGTLFFIPVGQSHVFRPKTPKKDRPLIVYN----CLLPASYLSELRDGFPYATEIL 115 Query: 124 SLATQQ-LSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPI--LVNKTSRT 180 + LS F V+ E ++ ++ Q + + + + L + Sbjct: 116 DCFADEGLSWFSVKDSTGEYHAMFRELYQEFAAKPPAYMAVLASLVMRILTGLYRHKLQI 175 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 + R V + + FI NY L + ++A KL+ +F+R +++ +Y+ Sbjct: 176 IAPAGDRPQWLSVDEAIAFIDRNYASELKLGELAAQAKLSERQFSRLFRRHTGMSLIEYV 235 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 ++R++ LL+ S+ DIA G+ FY F K G++P+QYR Sbjct: 236 QSIRMDAACRLLTTRHSSVEDIAGAVGYADMKFFYRLFKKKTGVTPRQYR 285 >UniRef50_B0A839 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A839_9CLOT Length = 303 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 106/252 (42%), Gaps = 7/252 (2%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH--QLTDTGTCQSMAIFNL 98 HWH ++ +V +G +EY +N++ + +G + T H + + C +A+ Sbjct: 41 YHWHYEMTFSVILEGSMEYRVNDKIYEMKKGDGLFINSHTLHTAKGYNNKDCAFLALMFR 100 Query: 99 PMHLF--LSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE 156 P +F + I+ + +G S + + L + + I Q Sbjct: 101 PNFIFGHEESIIKTKYIDIIENGGQCPSFFFNSNNKTHQKIMSLVLEAND--IFQNKGPC 158 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQF-YVSQMLGFIAENYDQALTINDVAE 215 L++K W + +++VS +S++L FI NY +T++D++E Sbjct: 159 YELLVKSKVCEIWSLFFNEVSFILQEDNVSNSNDVVRLSKILNFIHSNYKNKITLDDISE 218 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 ++ + F++ + T +Y+ RI LL +I +I+ + GF ++S + Sbjct: 219 CCNISKSECCRFFKKATRQTPFEYLLNYRIKKSIPLLLSDQYNITEISESVGFSNASYYT 278 Query: 276 STFGKYVGMSPQ 287 F + + +SP Sbjct: 279 EIFKRVMDLSPT 290 >UniRef50_UPI0001C36264 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36264 Length = 282 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 102/263 (38%), Gaps = 17/263 (6%) Query: 37 IMPTSHWHG--QVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 H H +E N +G Y I E N+ + ++ + TPH+L +C +M+ Sbjct: 29 YYMDYHQHPAGSIEFNYIVEGTCYYNIAGEIYNLKKRNLMIVNGNTPHKLISPDSCINMS 88 Query: 95 IFNLPMHLFLSWPLDKDLINHVT-HGMVIKSLATQQL--SPFEVRRWQQELNSPNEQIRQ 151 I L S L+ G ++L T + + + +E+ + + Sbjct: 89 INYYQSELTPSIGTLSALVQAYPCLGTFFQNLNTGLVIQNARNIFHLLEEICNETNNKKD 148 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 + +++ + + + K+ YV Q +I ++ I+ Sbjct: 149 PYY--LNILVNKALIEVVRLLSAEKS----------PTDTYVEQTKNYINYHFFSIENID 196 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 ++A +V LN Y IF+ LT+ Y+T R+ L +D I DI G S Sbjct: 197 EIASYVALNKVYLQKIFREKTGLTIWNYLTKYRMEKAVYFLLYSDTPISDIDELVGINSR 256 Query: 272 SRFYSTFGKYVGMSPQQYRKLSQ 294 FY F K GMSP +YRK + Sbjct: 257 QNFYLLFKKQYGMSPSEYRKRYK 279 >UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K6_PAESJ Length = 277 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 106/270 (39%), Gaps = 12/270 (4%) Query: 28 MEIEFRAPHIMPTSHWHGQV-EVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD 86 +P P H H E+ + +G ++++ + + G + L+ H+ Sbjct: 19 FNCHEASPFQHPL-HRHETFSELLLVEEGRGTFVVDGKPYEVGPGTVLLYHRGIWHEEWS 77 Query: 87 TGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPN 146 T F ++ VI+ + VR EL+S Sbjct: 78 THYPFRATYFAFK--DLQVKGCPQNYFLGPDQAPVIELGEKTDETASLVRECLAELHSGL 135 Query: 147 EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 + R A G + + + + + A+ V + G+I ENY Q Sbjct: 136 AESRAAANHLFG--------LLLARLARLVPGESTERRIVKPAEAAVIKARGYIEENYQQ 187 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 +T+ +A+ ++ Y +FQ+ + +++ Q++ R+ + L T + + +I Sbjct: 188 PITLEQLAKVTFVSKYYLSHLFQQEVGISVIQFLIQCRMEAAKRYLIMTGRPVKEIGELV 247 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 G++S F++ F K G++P Q+R+ ++++ Sbjct: 248 GYQSEPTFHNLFKKVTGLTPGQFRESAREK 277 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 173 bits (438), Expect = 7e-42, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 100/267 (37%), Gaps = 14/267 (5%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ--LTDTGTCQSMAIFNL 98 +H H ++ G + + + I +G I + T H ++ + + Sbjct: 46 THCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFM 105 Query: 99 PMHL---FLSWPLDKDLINHVTHGMVIKS-------LATQQLSPFEVRRWQQELNSPNEQ 148 P + F P D + ++ + ++ VR +++ E Sbjct: 106 PSFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYE- 164 Query: 149 IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQAL 208 R+ +I L K L VN S + +++++ I +Y + + Sbjct: 165 -RRTPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDM 223 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 +ND+ L+ + +F+ T +Y+T +RI +L + S+ D+ + GF Sbjct: 224 NLNDLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGF 283 Query: 269 RSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 S F F KY G+SP +RK + + Sbjct: 284 NELSYFCRIFKKYTGISPTDFRKQAMK 310 >UniRef50_A5MLM9 Transcriptional regulator, AraC family (Arabinose-binding/dimerisation), putative n=1 Tax=Streptococcus pneumoniae SP19-BS75 RepID=A5MLM9_STRPN Length = 293 Score = 173 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 93/253 (36%), Gaps = 3/253 (1%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSM---AIFN 97 HWH +E+ +G + I+ + N +G I L H + F Sbjct: 36 FHWHTDMEIIYVHEGQARFHIDTDYFNSEKGDIILIRPNALHSIHPIENTYHYMDAINFQ 95 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 L + + + H + + + + +Q L + E Sbjct: 96 LDLIGYSTKDFAAIHYLHPLYNGQLDFKRVIKPNQPGYTEIRQTLINSMEIGYYRKTFFE 155 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 + N + ++ + + +++ +I+E+Y + L+IN +AE Sbjct: 156 LELKSELLKLLHLLFQYNYVYSSKQSIDGYRREEKIRKIIDYISEHYQEDLSINLLAELC 215 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 + + M F++ + ++ Y+ R+ LL + S+L+IA + GF + S F Sbjct: 216 GYSPTHFMNFFKKNLGVSCMDYLIHYRLRKATELLQHSTLSVLEIASSVGFSNLSNFNRQ 275 Query: 278 FGKYVGMSPQQYR 290 F K P++YR Sbjct: 276 FKKIYKTIPRKYR 288 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 98/255 (38%), Gaps = 3/255 (1%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 H H +E V G ++ I+ + + +G L T H+ + + + + Sbjct: 32 YHAHDFIEFAVIMGGKGKFYIDGKDYEVEEGDFILLNPGTYHRSKAGYSKEGLKECYIAF 91 Query: 101 HLFLSWPLDKDLINHVT-HGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGL 159 +G +IK + + F++ + R + + Sbjct: 92 SGVSFKGCKSGYFPSFKGNGKIIKMADRMKKNIFQICTVMNKEARECSAGRYFMLKAYLI 151 Query: 160 MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 + + + + + S ++ V Q++ ++ ENY + +++ +A ++ L Sbjct: 152 QILCLVVREQKEEKQEGEGKGYIFQ-STGKKYVVQQIMKYMEENYREKISLEQIAANMYL 210 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLS-DTDKSILDIALTAGFRSSSRFYSTF 278 ++ Y IF+ T Y+ +R+ + +L ++ I ++A G+ + F F Sbjct: 211 SSFYIAKIFKSETGDTPINYLIRLRMEKAKEILEISPEEPIKEVAAAVGYSDAYHFSKLF 270 Query: 279 GKYVGMSPQQYRKLS 293 K+ G+SP Y+K S Sbjct: 271 KKHYGISPLYYKKDS 285 >UniRef50_B1MWN3 AraC-type DNA-binding domain-containing protein n=1 Tax=Leuconostoc citreum KM20 RepID=B1MWN3_LEUCK Length = 290 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 115/259 (44%), Gaps = 15/259 (5%) Query: 41 SHWHGQVEVNVPFDGDVE-YLINNEKVNINQGHITLFWACTPHQL-TDTGTCQSMAIFNL 98 HWH ++E+++ +G ++ + ++ + G + + + + H + ++ +F Sbjct: 43 KHWHEELELSLTVNGHIDQFTVDGRPYHTKTGDVLVINSGSVHSVPIQKPGTEAFTLFFN 102 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 P L + P +++ TH + ++ + +L + + P Sbjct: 103 PDFLRAALPQASEIV-FATHPNDVSAVESTELVDYLYAMHYTVRHDPMNY---------- 151 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVS--RHAQFYVSQMLGFIAENYDQALTINDVAEH 216 L + R + + ++++ ++R + + + ++L +I + LT+ VAEH Sbjct: 152 LRITRLAYDILDELVMHFSNREFGINPHLIQTVDERLYKILFYIKAHIYNGLTVAAVAEH 211 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 ++ +Y F+ +Q++ Y+ A+R+N L +T+KS+ I+ T GF F Sbjct: 212 FDISTSYLSRYFKIKLQMSPLAYLQAVRLNKAYQYLMNTNKSMSWISDTTGFGDVKSFER 271 Query: 277 TFGKYVGMSPQQYRKLSQQ 295 F K G SP+ YR+ ++ Sbjct: 272 LFKKKYGTSPKSYRQQFRK 290 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 112/272 (41%), Gaps = 11/272 (4%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 +E R P H H E+ + G ++ + + G + PH + Sbjct: 23 VERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELVTGDTFVIGGDRPHDYLNMDQ 82 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQ-------QLSPFEVRRWQQEL 142 + I P+ L LS + L + + + + QL+P E+ + + Sbjct: 83 LSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKRHQFTSRLQLNPAELIETLRYV 142 Query: 143 NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 S +++++Q + +L+ + + + +++ + I Sbjct: 143 ESLDQELKQRSAG----FRTMATLTMLQLVTFLSRCYIRTRNPESKKLLRIAEAISHIQR 198 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 ++D+ ++++D+ E ++ + F+ M+ + +Y+ +RI LL TD+SI DI Sbjct: 199 HFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQEASRLLRSTDRSITDI 258 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 A GF S+ F F ++G+SP++YRK + Sbjct: 259 AFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 101/268 (37%), Gaps = 18/268 (6%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH-------QLTDTG 88 ++ H H E+ G + + G + L H + G Sbjct: 28 NLEAKLHQHDAWELYYVVHGQGNRMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEEG 87 Query: 89 TCQSMAIFNLPMHLFLSWPLDKDLINHVTH-GMVIKSLATQQLSPFEVRRWQQELNSPNE 147 + + + L + +L N ++ +L S +RR E+N +E Sbjct: 88 HVRYLMVAFSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESSRIIRRILSEINEMDE 147 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 R A+ L + + L K R ++ + Q+ ++ ++Y + Sbjct: 148 LERLSAM----FRLLPVIFTSSDYTLAGKPMRIERDV------RRMQQICAYVMKHYVHS 197 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 + ++D+AE V +N + F+R +T Q++T R+N LL +T + + +I G Sbjct: 198 IALDDIAEEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVG 257 Query: 268 FRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 F F F +GMSP +YRK + Sbjct: 258 FNDLPHFVRVFTNTMGMSPTKYRKQYKN 285 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 108/267 (40%), Gaps = 13/267 (4%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQS 92 R+ M SH+H E+ +G + ++++ G + LF + H + Sbjct: 21 RSSENMMKSHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYSMH--HSYAPSED 78 Query: 93 MAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQL 152 A + ++ D LI + H + + ++ + + L Sbjct: 79 QAFQRIVVYFTEKAIGDLTLIEKMRHAGGL--YHPDRRMSHQIHGLLGMMLMEQSETDDL 136 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 + +L+ L + + RT +V++ V +++ +I+++Y + L +++ Sbjct: 137 HDITMETILRAILLLLLKDV------RTLNPTVNK---SRVIKVIEYISDHYMEDLRLDE 187 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 +A ++ Y F++ T+ QYI RI + + + +T+ +A GF SS+ Sbjct: 188 LAGRFYVSQYYLCREFKKYTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASST 247 Query: 273 RFYSTFGKYVGMSPQQYRKLSQQRRQT 299 F F GM+P +RK QR+ T Sbjct: 248 HFSRVFRSVTGMTPTAFRKSCSQRQVT 274 >UniRef50_B6FQ86 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ86_9CLOT Length = 324 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 9/259 (3%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG-TCQSMAIFNLP 99 H H +E+ F G ++I+ +V + + TPH + +G + IF LP Sbjct: 64 EHTHKYMEIIYMFSGSATHIIDKTEVKLEADDVLFIKQGTPHSASASGYNDIGIKIFVLP 123 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGL 159 FL +PL + + K+ + Q+L + + + Sbjct: 124 E--FLQYPLSMLNEDTALRRFIKKAAENDGKDKEFLHFHLQDLPDAQNLLENMTRSLLNQ 181 Query: 160 ML--KRFSLSGWEPILVNKTSRTHK---NSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 KR + +L+ ++RT+ S S + V + L +I ENY A ++N Sbjct: 182 TRNSKRILQATMGVLLMELSNRTYTITVGSPSSYESQIVLEALRYIEENYQTA-SLNKFC 240 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 EH L Y + + T +Y+ RI LL++TD I I + G+ +SS F Sbjct: 241 EHHNLPCYYVSRLMTQYSPYTFTKYLQRRRILQAAYLLTETDTPIEQIVVEVGYENSSHF 300 Query: 275 YSTFGKYVGMSPQQYRKLS 293 + F + GM+P++YR+ Sbjct: 301 HKLFKEEYGMTPKKYREKY 319 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 101/299 (33%), Gaps = 21/299 (7%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 ++ + S E + I P + HWH +E+ G Sbjct: 82 LDRKKELESFQETKKHGSTMFPFNIYPCTIPGDFPSV--ALHWHKSMEIIFVKKGTGRIQ 139 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWP----LDKDLINHV 116 G I + T H + + FL DK+ + + Sbjct: 140 TGRNMQEARSGDIFVMPPGTLHAIYAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPL 199 Query: 117 THGMVIKSLATQQLSP-----FEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEP 171 G +++ + R +EL S E+ +L + + E Sbjct: 200 ASGQLLQPAVFSPVDAGYKQISACLRRAEELCSARERGYELGV----------KAALLEL 249 Query: 172 ILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 +L + ++L I ++Y + LT+ D+A ++++ M F+R+ Sbjct: 250 LLYLLRMCPEAPERDTPDMERLKRVLQRIEQDYAKPLTVPDMAAVCGCSSSHFMRWFKRM 309 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + Y+ R+ L +TD IL IA AGF + S F F K G++P+ YR Sbjct: 310 TGTSPLAYLNERRLAAAAENLRETDDKILVIAENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7U7_EUBE2 Length = 304 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 106/265 (40%), Gaps = 15/265 (5%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH---QLTDTGTCQSMA 94 M H+H Q E+ +G+ ++ +N+ N G I + H ++D + Sbjct: 28 MNVKHFHNQYEIFYIIEGERQFFFDNKSYNAYAGDIAILDTNLVHTTCSISDEDKGYNRV 87 Query: 95 IFNL---PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE--VRRWQQELNSPNEQI 149 I + M F +L+N+ + I L Q F R + EL N Sbjct: 88 ILYIDYEKMCDFDKKYPGLNLVNYFHNNYGIYHLNEDQRIAFLNLYRDLRHELTKKNSGY 147 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 + L + + ++ + K + + + ++ NY + L Sbjct: 148 QSRVEIATIYWLYKLLSLKHDSTQIHAVINSPKELSASN-------ISAYLEANYTKELA 200 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++ +++ + ++ Y IF+ T+ +Y+ +RI +L ++ SI D+A GF Sbjct: 201 LDTISDELFMSKYYMCRIFKEYTGFTITEYVNTLRIKKATQILESSNLSISDVAAELGFE 260 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQ 294 S+S F F K + ++P +YRK Q Sbjct: 261 SASYFERIFKKIMTVTPLKYRKTHQ 285 >UniRef50_D2LZN1 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZN1_BACS4 Length = 362 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 120/303 (39%), Gaps = 25/303 (8%) Query: 25 YQRMEIEFRAPHIM-PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ 83 + +M+ A ++M HWH VE+ G + E + +++G + PH+ Sbjct: 33 HPQMQATVLAGNVMYNRLHWHEHVEIIYCVRGSFSLRVGGEVMKLSEGDFATINSDVPHE 92 Query: 84 LTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRR--WQQE 141 + D IF++ L ++ + V V K + Q V R W Sbjct: 93 IFDGIEDGLQIIFSVEKSLLRKEEWEQYQFSTVGDYAVAKDCSDAQQFRKSVARMTWLVT 152 Query: 142 LNSPNEQIRQLAIDEIGLMLKR--------------------FSLSGWEPI-LVNKTSRT 180 L+ + A + G ++R + + + + + K Sbjct: 153 LDRNQMIALEAAHKDFGKKIERDEWRELYSSSILQTEEEWYEYQMEVFHCLYCMAKHKSI 212 Query: 181 HKNSVSR-HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 KN+V R + + I Y L ++E V ++ + Q+ + +++ Y Sbjct: 213 EKNNVDRLQPKNQFRLCIELIHREYGSELDAKKLSEAVGVSEPTIYRMVQKNLGVSLNNY 272 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQT 299 I +RI+ V A L TD SI ++A GF S S FY F + VG +P+++RK Q + T Sbjct: 273 IQMVRIHAVCARLEQTDASITEVAFDCGFTSLSNFYRVFHELVGQTPREFRKGKQTKSVT 332 Query: 300 FPG 302 PG Sbjct: 333 LPG 335 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 104/284 (36%), Gaps = 18/284 (6%) Query: 19 LSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWA 78 + + + I H H E+ G + + + G + L Sbjct: 11 PEVENHSFFFIDQRVTTSIEAKLHRHDAWELYYVVHGYGKRMAGDTLQPFAAGDVALIPP 70 Query: 79 CTPH-------QLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKS-LATQQL 130 H D G + + + + + +L N +T + L Sbjct: 71 SMLHHWEYSPDSADDDGYVRYLMVAFSHSLVERCMAVFPELRNRLTGITFPTNALKFGTG 130 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 S +RR ++N +DE+G + + F L + T ++ R + Sbjct: 131 SSQTIRRILSQMND---------MDELGRLCEMFRLLPAIFTSSDHTFAGKPMNIERDVR 181 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 + Q+ ++ +Y ++++D+A V +N + F+R +T QY+T R+N Sbjct: 182 -RMQQICVYVMTHYIHTISLDDIAAEVGMNRSAFCSYFKRCKGMTFSQYVTQYRLNTACE 240 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 LL + K + +I T GF F F +GMSP +YR+ Q Sbjct: 241 LLKHSQKQVSEICFTVGFNDLPHFVRVFKNTLGMSPSKYRRRFQ 284 >UniRef50_C9LA37 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LA37_RUMHA Length = 326 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 100/295 (33%), Gaps = 9/295 (3%) Query: 3 TDTFMCSSDEKQTRSPLSL-YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLI 61 + Q +P Y +Q + E HWH + E G + Sbjct: 18 KSEIIMYKINIQEENPHGTPYFPFQALSQEDFCGQYFAPYHWHEETEFIYITKGSLMLRT 77 Query: 62 NNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMV 121 + +G++ H + PM FLS+ N + ++ Sbjct: 78 ETNSQLLTEGNVYFINPGMVHGIFGHSEVSHHYALLFPMS-FLSFSQYDICQNELLTPLL 136 Query: 122 IKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTH 181 K L + S + Q + S + +L +++ IL Sbjct: 137 SKKLLFPEGSSLSLEISLQ-IGSLISKAARLYLEDTSANTALSIKIILLQILEILFQEHA 195 Query: 182 KNSVSRHA------QFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLT 235 +S +H + + +I ++Y + +T+ +AE + LN NY F+ + T Sbjct: 196 FSSAQKHEAEKDFENHSLKSVFSYIEKHYMEPVTLEALAECIPLNKNYFCKFFKEKVGKT 255 Query: 236 MKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 Y+ RIN A L T I ++AL G+ + S F F Y +P +R Sbjct: 256 PFAYLNEYRINQAAAQLLKTTAPITEVALNNGYENISYFVRQFKHYKHCTPSDFR 310 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 47/149 (31%), Positives = 79/149 (53%) Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 +E+ L + +L + S E + + + + +S AQ V + + +I +Y Sbjct: 1050 SEEDMALLNQGVTTILSKGIFSADETLAHLQAALERRRRLSDQAQMLVRKAMAYIHSHYT 1109 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 LT D+A +V ++ +Y F++ + T +Y+ R+ R LL+++DKSI +IAL Sbjct: 1110 HPLTRQDIAHYVGMSEDYLTHCFRQELGTTPVEYLNRYRVLQARHLLAESDKSITNIALE 1169 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 GF SSS F F K VG SP++YR+L Q Sbjct: 1170 VGFSSSSYFSRVFRKEVGQSPEEYRRLKQ 1198 >UniRef50_A8U727 YfiF n=1 Tax=Carnobacterium sp. AT7 RepID=A8U727_9LACT Length = 302 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 113/266 (42%), Gaps = 12/266 (4%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ----SMAIF 96 H H Q E+ + G+ +YLINN+ ++ G + H+ TG + SM F Sbjct: 32 FHSHQQYELYFFYGGECKYLINNQIYDLQPGDMLFLDGLDLHKAHVTGNKELYERSMIHF 91 Query: 97 N----LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQL 152 + LP+ L D + + HG+ S + L + L+ E + Sbjct: 92 SPEWILPVLQELDALFLFDTFSQLHHGLFHTSNVKETLEIERLINQLSLLSQATEVDNEA 151 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 + +L L + KT+ + + YV ++ ++ + + + + I D Sbjct: 152 KAEAKAKILLIQLLFKVHEL--EKTTMLVLDKGNEGKYLYVEKIASYLQKYFKEVIYIED 209 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL--SDTDKSILDIALTAGFRS 270 +++ + L+ +Y F+ T+ QY+ R+ + L+ + +K+I +I+ GF S Sbjct: 210 ISKALNLSPSYISHTFKESTGYTVMQYLMDYRLIQAKYLIEVAGENKTIKEISRECGFES 269 Query: 271 SSRFYSTFGKYVGMSPQQYRKLSQQR 296 + F F K +G++P +YRK + Sbjct: 270 DAHFNRFFKKKIGVTPNEYRKKQLYK 295 >UniRef50_A7B6I0 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6I0_RUMGN Length = 311 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 112/252 (44%), Gaps = 8/252 (3%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP 99 +H H ++E+ + GD + IN + ++ I L A H++ ++ ++ Sbjct: 27 AAHLHPEIELILVLKGDPAFNINGNTTSFSEKDIILINANELHEIISEKAPSTLLSLHIL 86 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGL 159 F + I+ + + ++ K+ ++L + + + + I + Sbjct: 87 PQYFEGYFPQMSHISFLENTLLSKN---ERLFTYSFCKLLKIYLLQAPYYQLECAGLINI 143 Query: 160 MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 M+ S + K +++ +S+++ +I E+ + +T++D+A+H++L Sbjct: 144 MVHDILQSCAYYEMYG-----DKLALTTKRNSQLSEIIRYIEEHSAERVTLSDLAKHMQL 198 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 +A+Y Q+ + + +++T R + +ALL + S++DI GF + F Sbjct: 199 SASYLSHFIQKNLHRSFSEFLTYTRYLNAKALLMKGELSLIDICYGCGFSDYRYMNNAFK 258 Query: 280 KYVGMSPQQYRK 291 KY G +P +++K Sbjct: 259 KYTGQTPNEFKK 270 >UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV13_PAESJ Length = 285 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 93/249 (37%), Gaps = 2/249 (0%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH +E+N G YLIN + + +G I L + H+ + I P + Sbjct: 36 HWHTALEINYISRGSGYYLINGTRYDFREGDILLINSNDLHRAFENEGLVMTIIMFDPAY 95 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 L D +L+ + + P R E + E + Sbjct: 96 FALEQRYDTELLIPFREIGMRFDNMLDRGHPILPRLGAAIEEMRCEFAGREPHYEAVIRS 155 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNA 221 + + K + S V L I + T+ ++A L+ Sbjct: 156 QLVQFMAFVNRYFAK--EQERRSSRIRGMEIVRLTLNTIEADIAYPWTLKELAAAAHLSP 213 Query: 222 NYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKY 281 + +F + + + Y+ +R++ +LL +DK I+++A +AGFR+ S F F ++ Sbjct: 214 SRFSALFVQTVGTSPMDYLIQLRLSAAVSLLESSDKKIIEVAESAGFRNLSNFNRLFKQH 273 Query: 282 VGMSPQQYR 290 +G P + R Sbjct: 274 IGKQPSELR 282 >UniRef50_A8S1P5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S1P5_9CLOT Length = 309 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 99/260 (38%), Gaps = 10/260 (3%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT---GTCQSMA 94 M H+H Q E+ +G+ + NN + G + L H T + Sbjct: 26 MRVKHFHNQYEIFYIIEGERLFFFNNREYVARSGDLILVDTNLIHMTKSVTAEDTGHNRV 85 Query: 95 IFNLP---MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQ 151 I + M F L+ + L +Q + F + + Sbjct: 86 ILYVSYDRMKAFDGQYPSLQLVRFFHEHYGVYHLDKEQQALFLNFYRNLRIAMTEKAHNY 145 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 ++ + F ++ + V+K +S + +++EN +Q +++ Sbjct: 146 KVGIDLETLTWLFKITSY----VSKQEGASPHSSDHPKYRTAYAIADYLSENCEQNISLE 201 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 ++A H L+ Y F+ + T+ +Y RI + LL +TD SI +IA G+ S Sbjct: 202 ELAAHFYLSKYYVCRTFKEITGYTVTEYTNIHRIRKAKRLLEETDMSISEIAHELGYESL 261 Query: 272 SRFYSTFGKYVGMSPQQYRK 291 + F F ++ +SP +YRK Sbjct: 262 TYFERMFKSFMTISPLKYRK 281 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 100/258 (38%), Gaps = 1/258 (0%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 +HWH +E+ +P + + + + +I I + + H L + + IF + Sbjct: 53 THWHNAIEIILPVENHYDVEASGQAYHILPSEILIIPSGEMHALYAPESGKRF-IFLFDV 111 Query: 101 HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM 160 + + +T + I Q+ + Q N + + Sbjct: 112 SSIAQMKGYTSIQSLMTSCLHITKTTYPQIYNDVYQLLVQMRNEYFSSNEFRELAIYSHL 171 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 + F G I ++ + +++L +I +Y + LT++++A+ + Sbjct: 172 INLFVSIGRNRINNVDLFPNTRSHKQKEYLQKFNEVLDYIDSHYTEELTLDNIADFSGFS 231 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 + +F++ T Y+ RI LL++ + SI +IAL +GF S S F F + Sbjct: 232 KYHFTRLFKQYTDSTFYDYLIYRRIKAAEELLANPELSITEIALQSGFSSISTFNRIFKQ 291 Query: 281 YVGMSPQQYRKLSQQRRQ 298 G +P +YR L R Sbjct: 292 KKGCTPSEYRSLYSMNRH 309 >UniRef50_A9KRM0 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=A9KRM0_CLOPH Length = 296 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 96/252 (38%), Gaps = 1/252 (0%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH E+ +P + E ++NN + + G I L + HQL T IF Sbjct: 34 HWHTAAEIIMPIENTYEVVVNNIRHELEVGDIILLPSGELHQLY-APTKGKRIIFQFDYS 92 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 L + + + +I + + + ++ +++ Sbjct: 93 LLYNLTGFDSVFHMFHPCTLITNETMPDIHDNLHSLMLRIMDEYFGDSPLKEAAIYSMLV 152 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNA 221 F + G I K K+ + I E+ + + ++D+A+ + Sbjct: 153 NFFVILGRNYITSEKKFPNTKSPKRHEYIDKFLMVCTHINEHCTEPINVDDLAQLAGFSK 212 Query: 222 NYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKY 281 + M +F+ ++ Y+ RI H LL D + +I +IA+ +GF S + F F + Sbjct: 213 YHFMRLFKEFSGISYYDYLNKQRIMHAEKLLIDPNLTITEIAMHSGFNSLATFNRIFKEQ 272 Query: 282 VGMSPQQYRKLS 293 +P +Y++L Sbjct: 273 KQCTPSEYKRLH 284 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 97/269 (36%), Gaps = 10/269 (3%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH-------QLT 85 PH+ H H + E+ + G I + N G +TL PH Sbjct: 20 HFPHLSYPLHCHEEYELVIVTAGTGREYIGHAVENYRAGDMTLIGPDIPHLHLCDSLTGK 79 Query: 86 DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 + + I LF + + + P R+ ++++ Sbjct: 80 NGSEESACEILYFSPSLFPDNMDGIAEYRAIAAVLEKSRRGVRYSDPALTRQIRKQVQRL 139 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 ++ I + +L + S ++ + R N + Q V + ++ E++ Sbjct: 140 DKGQGIGRIRWLLALLDTLARSQETSLIASGPVR---NGTALRRQETVDTVCRYLREHFR 196 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + L + +A +N + F++ T+ ++ +RI + LL +T SI IA Sbjct: 197 ENLCLQAIAREACMNPSALCRHFRQRTGKTLFAFLAGIRIENACRLLLETRLSISAIAWE 256 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 GF + S F F G +P +YRK + Sbjct: 257 TGFANLSHFNRQFKSLTGQTPGEYRKNIR 285 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ACH9 Melibiose operon regulatory protein n=109 Tax=Ga... 301 2e-80 UniRef50_D0Z8I6 DNA-binding transcriptional dual regulator n=9 T... 259 7e-68 UniRef50_Q65T74 AraC protein n=2 Tax=Gammaproteobacteria RepID=Q... 248 1e-64 UniRef50_B9K1R2 Transcriptional regulator AraC family n=2 Tax=Ag... 238 1e-61 UniRef50_B8CMD7 Transcriptional regulator, AraC family n=1 Tax=S... 237 3e-61 UniRef50_A8H314 Transcriptional regulator, AraC family n=4 Tax=S... 237 5e-61 UniRef50_C4L876 Transcriptional regulator, AraC family n=1 Tax=T... 236 6e-61 UniRef50_B1ZNN6 Transcriptional regulator, AraC family n=1 Tax=O... 232 1e-59 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 229 7e-59 UniRef50_C6B664 Transcriptional regulator, AraC family n=2 Tax=R... 227 4e-58 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 220 3e-56 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 220 4e-56 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 220 4e-56 UniRef50_B9JGQ4 Transcriptional regulator protein n=4 Tax=Rhizob... 220 6e-56 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 220 7e-56 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 218 2e-55 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 218 2e-55 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 218 2e-55 UniRef50_Q7US19 Melibiose operon regulatory protein n=1 Tax=Rhod... 217 3e-55 UniRef50_B6A4E8 Transcriptional regulator, AraC family n=11 Tax=... 217 5e-55 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 215 1e-54 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 215 2e-54 UniRef50_Q7UU63 Melibiose operon regulatory protein n=1 Tax=Rhod... 215 2e-54 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 214 2e-54 UniRef50_B5JCW6 Transcriptional regulator, AraC family protein n... 214 4e-54 UniRef50_A4BGH9 Regulator of melibiose operon n=1 Tax=Reinekea b... 213 4e-54 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 213 4e-54 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 213 5e-54 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 213 5e-54 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 213 5e-54 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 212 2e-53 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 212 2e-53 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 212 2e-53 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 211 2e-53 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 211 2e-53 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 211 3e-53 UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostri... 210 4e-53 UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC... 210 5e-53 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 210 5e-53 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 210 5e-53 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 210 6e-53 UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bactero... 210 7e-53 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 209 8e-53 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 209 9e-53 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 209 1e-52 UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 T... 209 1e-52 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 208 1e-52 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 208 1e-52 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 208 1e-52 UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=B... 208 2e-52 UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides Re... 208 2e-52 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 207 3e-52 UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC... 207 3e-52 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 207 3e-52 UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaeros... 207 3e-52 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 207 3e-52 UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=S... 207 4e-52 UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=B... 207 4e-52 UniRef50_UPI0001745A92 transcriptional regulator n=1 Tax=Verruco... 207 5e-52 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 206 9e-52 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 206 1e-51 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 205 1e-51 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 205 1e-51 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 205 1e-51 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 205 1e-51 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 205 2e-51 UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostri... 205 2e-51 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 205 2e-51 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 204 3e-51 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 204 3e-51 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 204 3e-51 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 203 4e-51 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 203 5e-51 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 203 5e-51 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 203 5e-51 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 203 5e-51 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 203 6e-51 UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=S... 203 6e-51 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 203 6e-51 UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus s... 203 7e-51 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 203 7e-51 UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 T... 203 7e-51 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 203 8e-51 UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminoc... 203 8e-51 UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostri... 203 8e-51 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 203 9e-51 UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enteroc... 203 9e-51 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 202 9e-51 UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostri... 202 1e-50 UniRef50_B0MHX9 Putative uncharacterized protein n=1 Tax=Anaeros... 202 1e-50 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 202 1e-50 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 202 1e-50 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 202 1e-50 UniRef50_C7PB15 Transcriptional regulator, AraC family n=1 Tax=C... 202 2e-50 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 202 2e-50 UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verruco... 202 2e-50 UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 ... 202 2e-50 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 201 2e-50 UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 T... 201 2e-50 UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protei... 201 2e-50 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 201 2e-50 UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=B... 201 3e-50 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 201 3e-50 UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacterial... 201 3e-50 UniRef50_C6JDN8 Putative uncharacterized protein (Fragment) n=1 ... 200 4e-50 UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=D... 200 4e-50 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 200 4e-50 UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=L... 200 4e-50 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 200 4e-50 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 200 4e-50 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 200 5e-50 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 200 5e-50 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 200 6e-50 UniRef50_Q2S9E7 AraC-type DNA-binding domain-containing protein ... 200 6e-50 UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostri... 200 6e-50 UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=S... 200 6e-50 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 200 6e-50 UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostri... 200 6e-50 UniRef50_UPI0001BC838F helix-turn-helix- domain containing prote... 200 6e-50 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 200 7e-50 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 199 7e-50 UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=A... 199 8e-50 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 199 8e-50 UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 T... 199 8e-50 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 199 8e-50 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 199 1e-49 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 199 1e-49 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 199 1e-49 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 199 1e-49 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 199 1e-49 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 198 1e-49 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 198 1e-49 UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostri... 198 1e-49 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 198 1e-49 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 198 2e-49 UniRef50_Q1QUA4 Transcriptional regulator, AraC family n=1 Tax=C... 198 2e-49 UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales ... 198 2e-49 UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=C... 198 2e-49 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 198 2e-49 UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostri... 198 2e-49 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 198 3e-49 UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=... 198 3e-49 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 197 3e-49 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 197 3e-49 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 197 3e-49 UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Diali... 197 3e-49 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 197 4e-49 UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=... 197 4e-49 UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=... 197 4e-49 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 197 5e-49 UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=B... 197 5e-49 UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnos... 197 5e-49 UniRef50_C7MHG0 Response regulator containing CheY-like receiver... 197 5e-49 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 197 5e-49 UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=C... 196 7e-49 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 196 8e-49 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 196 9e-49 UniRef50_C4Z7H0 AraC family transcriptional regulator, L-rhamnos... 196 9e-49 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 196 9e-49 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 196 1e-48 UniRef50_Q2CBW0 Regulatory protein n=1 Tax=Oceanicola granulosus... 195 1e-48 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 195 1e-48 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 195 1e-48 UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula m... 195 1e-48 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 195 1e-48 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 195 1e-48 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 195 1e-48 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 195 1e-48 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 195 1e-48 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 195 2e-48 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 195 2e-48 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 195 2e-48 UniRef50_B3CFU1 Putative uncharacterized protein n=2 Tax=Bactero... 195 2e-48 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 195 2e-48 UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostri... 195 2e-48 UniRef50_B6A065 Transcriptional regulator, AraC family n=1 Tax=R... 195 2e-48 UniRef50_Q4ZTP2 Helix-turn-helix, AraC type n=23 Tax=Bacteria Re... 195 2e-48 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 195 2e-48 UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=P... 195 2e-48 UniRef50_C9KIY1 Transcriptional regulator, AraC family n=1 Tax=M... 195 2e-48 UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacteri... 195 2e-48 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 195 2e-48 UniRef50_C0A1S6 Transcriptional regulator, AraC family n=1 Tax=O... 194 3e-48 UniRef50_C7PTR1 Transcriptional regulator, AraC family n=1 Tax=C... 194 3e-48 UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Cl... 194 3e-48 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 194 4e-48 UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=B... 194 4e-48 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 193 4e-48 UniRef50_B3C996 Putative uncharacterized protein n=1 Tax=Bactero... 193 4e-48 UniRef50_A9KRM0 Transcriptional regulator, AraC family n=3 Tax=F... 193 4e-48 UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotro... 193 5e-48 UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=S... 193 5e-48 UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium re... 193 5e-48 UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=C... 193 6e-48 UniRef50_A3HT27 Transcriptional regulator n=1 Tax=Algoriphagus s... 193 6e-48 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 193 7e-48 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 193 7e-48 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 192 1e-47 UniRef50_UPI00019737F8 L-rhamnose operon transcriptional activat... 192 1e-47 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 192 2e-47 UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=C... 192 2e-47 UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blaut... 192 2e-47 UniRef50_C9LA37 Transcriptional regulator, AraC family n=1 Tax=B... 191 2e-47 UniRef50_C6J603 Transcriptional regulator n=5 Tax=Bacilli RepID=... 191 2e-47 UniRef50_B8I274 Transcriptional regulator, AraC family n=2 Tax=C... 191 3e-47 UniRef50_B3CFD8 Putative uncharacterized protein n=3 Tax=Bactero... 191 3e-47 UniRef50_C5ETS2 Helix-turn-helix domain-containing protein n=1 T... 191 3e-47 UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=S... 191 3e-47 UniRef50_A1ZWA4 Activator protein MtlR n=1 Tax=Microscilla marin... 191 3e-47 UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminoc... 191 3e-47 UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral... 191 3e-47 UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostri... 191 3e-47 UniRef50_Q2SE27 Putative uncharacterized protein n=1 Tax=Hahella... 191 3e-47 UniRef50_B9Y348 Putative uncharacterized protein n=1 Tax=Holdema... 190 4e-47 UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enteroc... 190 4e-47 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 190 4e-47 UniRef50_C6VY23 Transcriptional regulator, AraC family n=2 Tax=S... 190 4e-47 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 190 5e-47 UniRef50_A5MLM9 Transcriptional regulator, AraC family (Arabinos... 190 5e-47 UniRef50_C0D9W5 Putative uncharacterized protein n=1 Tax=Clostri... 190 6e-47 UniRef50_A9E4Z4 tRNA delta(2)-isopentenylpyrophosphate transfera... 190 6e-47 UniRef50_Q9S309 Putative AraC-type Regulator n=1 Tax=Ruminococcu... 190 6e-47 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 190 6e-47 UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostri... 190 7e-47 UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=C... 189 8e-47 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 189 9e-47 UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family prot... 189 1e-46 UniRef50_A7AFT7 Putative uncharacterized protein n=2 Tax=Parabac... 189 1e-46 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 189 1e-46 UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostri... 188 1e-46 UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecali... 188 2e-46 UniRef50_B7C800 Putative uncharacterized protein n=1 Tax=Eubacte... 188 2e-46 UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostri... 188 2e-46 UniRef50_A5FA16 Transcriptional regulator, AraC family n=3 Tax=F... 188 2e-46 UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=C... 188 3e-46 UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacte... 188 3e-46 UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 T... 188 3e-46 UniRef50_Q93PA7 MS124, putative transcriptional activator n=1 Ta... 187 3e-46 UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminoc... 187 4e-46 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 187 4e-46 UniRef50_C6W148 Transcriptional regulator, AraC family n=1 Tax=D... 187 4e-46 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 187 4e-46 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 187 4e-46 Sequences not found previously or not previously below threshold: UniRef50_B4D507 Transcriptional regulator, AraC family n=1 Tax=C... 195 2e-48 UniRef50_Q7CUK1 Transcriptional regulator, AraC family n=1 Tax=A... 192 1e-47 UniRef50_B9JPZ9 Transcriptional regulator (AraC/XylS family) n=1... 192 2e-47 UniRef50_B2JDH4 Transcriptional regulator, AraC family n=33 Tax=... 190 5e-47 UniRef50_B4CY94 Transcriptional regulator, AraC family n=1 Tax=C... 190 6e-47 UniRef50_D2QF95 Transcriptional regulator, AraC family n=1 Tax=S... 189 1e-46 UniRef50_B1Y6T0 Transcriptional regulator, AraC family n=4 Tax=B... 187 3e-46 >UniRef50_P0ACH9 Melibiose operon regulatory protein n=109 Tax=Gammaproteobacteria RepID=MELR_ECOL6 Length = 302 Score = 301 bits (771), Expect = 2e-80, Method: Composition-based stats. Identities = 302/302 (100%), Positives = 302/302 (100%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL Sbjct: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM Sbjct: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT Sbjct: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI Sbjct: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF Sbjct: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 Query: 301 PG 302 PG Sbjct: 301 PG 302 >UniRef50_D0Z8I6 DNA-binding transcriptional dual regulator n=9 Tax=Enterobacteriaceae RepID=D0Z8I6_EDWTE Length = 313 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 180/292 (61%), Positives = 223/292 (76%), Gaps = 2/292 (0%) Query: 5 TFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNE 64 MC+S + Q SPL LY+E+QR+ I P M SHWH QVE+N+PFDG+++Y I++ Sbjct: 12 ELMCNSTDPQPHSPLMLYTEHQRLTIALCPPQAMAASHWHAQVELNIPFDGEIDYRIHDR 71 Query: 65 KVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKS 124 + I QGHI LFWACTPH+L D G C+SMA+ +LPMHLFL+WPLD L++H+THG V+ S Sbjct: 72 TLRIPQGHIALFWACTPHRLVDPGRCRSMALLSLPMHLFLAWPLDPQLLSHITHGRVLTS 131 Query: 125 LATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILV--NKTSRTHK 182 +L+P E+ RWQQ+L SP Q+RQLA DEI LMLKRFSLSGW + + Sbjct: 132 AHPARLTPVEIGRWQQDLQSPCPQMRQLASDEILLMLKRFSLSGWHAMQPGGDDPRAGSG 191 Query: 183 NSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITA 242 +SRHA FYV QML F A +YD+ALTI VA HV LNA+YAMG+FQRVMQ+T+KQYITA Sbjct: 192 QGLSRHALFYVGQMLTFTAAHYDRALTIEQVARHVGLNAHYAMGLFQRVMQMTLKQYITA 251 Query: 243 MRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 MRI+HVRALLSDTD+++LDIALTAGF SSSRFYSTF KY GMSPQQYR+L++ Sbjct: 252 MRIHHVRALLSDTDRTVLDIALTAGFSSSSRFYSTFSKYTGMSPQQYRRLAR 303 >UniRef50_Q65T74 AraC protein n=2 Tax=Gammaproteobacteria RepID=Q65T74_MANSM Length = 360 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 148/294 (50%), Positives = 196/294 (66%), Gaps = 1/294 (0%) Query: 2 NTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAP-HIMPTSHWHGQVEVNVPFDGDVEYL 60 T T + + SPLSL + + +E + P MP HWHG +E+N+PFD DVEY Sbjct: 28 QTSTELADKSGSEIISPLSLSLDARPFNVEIQQPPGNMPAYHWHGHIEINIPFDDDVEYS 87 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 N IN GHI++FWA PH+LTD C++MA+FN+P++ FLSW L ++LINH+THG+ Sbjct: 88 FNEHSTLINAGHISIFWASIPHRLTDKHNCRTMAVFNIPVYQFLSWQLSQNLINHITHGI 147 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 +I+S + +S FEV+RW+QEL + +L DEI LM+KR SL GW +L Sbjct: 148 IIQSKNPRLVSLFEVQRWEQELKLEDPNRHKLVYDEIQLMIKRVSLDGWLLLLEPPKKNN 207 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 H+ S S+HAQ YV ML +IA +Y+ LT+ VA V LN NYAMG+FQ MQLT+KQYI Sbjct: 208 HQLSGSKHAQNYVRTMLDYIANHYNAPLTVQSVANAVGLNTNYAMGLFQSAMQLTIKQYI 267 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 MRINH +ALLSDT++S+LDI+LT GF S SRFY F KY G+SP +YRK + Sbjct: 268 IMMRINHAKALLSDTNRSVLDISLTTGFSSMSRFYDNFLKYTGVSPNKYRKQIR 321 >UniRef50_B9K1R2 Transcriptional regulator AraC family n=2 Tax=Agrobacterium RepID=B9K1R2_AGRVS Length = 311 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 75/285 (26%), Positives = 127/285 (44%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQG 71 E+ PL ++ + + E M H H Q+E+N +G + Y + ++ I++G Sbjct: 19 ERDPAHPLVVFGDNRFCAGELLDVQKMAGPHMHSQIELNFVLEGSMTYWFDGRELTISEG 78 Query: 72 HITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLS 131 + LFW PHQ+ D +PM +FL + V G VI++L + Sbjct: 79 RLCLFWGMIPHQVIDRREGTRFICLYVPMSVFLGLASLSQFRDSVFRGAVIEALHLRAWD 138 Query: 132 PFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQF 191 RW+ EL +E ++ E+ L R GW + ++ Sbjct: 139 REIFLRWRDELLGGDEGDIEIVRSELTARLMRIERDGWRDLREQGSALASLGQRDAGWML 198 Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 +V +ML FI E+ ++ DV L+ NYAM +F+R + T+ Q I R++ ++L Sbjct: 199 HVEKMLRFIGEHAPDTISAEDVGRAAGLHPNYAMSLFKRAVGTTINQAIIRHRLDTAQSL 258 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 L +D I ++A +GF S S FY F + P QYR+ + + Sbjct: 259 LISSDMPITEVAYESGFGSLSTFYEAFQRRFMEKPVQYRRRMRAK 303 >UniRef50_B8CMD7 Transcriptional regulator, AraC family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CMD7_SHEPW Length = 302 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 157/291 (53%) Query: 8 CSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVN 67 + + + SPL + + P IMPTSHWHG +E+N F+ +YLIN + ++ Sbjct: 5 VNRIKFKENSPLETQAHESNFGFQRHKPEIMPTSHWHGHIEINYLFNCSADYLINGKHIS 64 Query: 68 INQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLAT 127 + +G + LFWA PHQ+ M +P++ FLSW + D I+++ HG V+ + Sbjct: 65 VPEGKMILFWASIPHQMVAYEGDGEMVNIYIPLNAFLSWKMSNDFISNILHGEVLVAENL 124 Query: 128 QQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSR 187 + WQ +L + IDEI ++R S+ + +N+ S Sbjct: 125 HASDKVITQLWQDDLQKKEIYLTMQVIDEIRNRIRRMSMESYSTFDLNRNSNKQDRKSLV 184 Query: 188 HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH 247 ++ +L +IA+NYDQ +TI+DVA+ L+ NY M +FQ +M++++KQYI +R+ H Sbjct: 185 SGLPHIQTILKYIADNYDQKITIDDVAKLTGLHPNYVMKLFQGIMKISIKQYINQLRLQH 244 Query: 248 VRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 +ALL DT+ +L+IAL AGF S SRFY F + M+P Q+R ++ Sbjct: 245 AQALLVDTNNPVLNIALEAGFGSISRFYDIFQREFNMTPLQFRNSIVNPQK 295 >UniRef50_A8H314 Transcriptional regulator, AraC family n=4 Tax=Shewanella RepID=A8H314_SHEPA Length = 292 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 91/285 (31%), Positives = 154/285 (54%) Query: 8 CSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVN 67 SPL++ ++ + + + P +MP SHWHG +E+N FD +YLIN +++ Sbjct: 5 VEKISFNEASPLAVQAQDTQFGLHRKKPAVMPHSHWHGHIEINYLFDCSADYLINGQEIT 64 Query: 68 INQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLAT 127 + +G + +FWA PHQ+ + + +P+ FL+W L ++ + HG VI S + Sbjct: 65 VPEGRMIIFWASFPHQMVASRGDGELVNIYIPLQSFLTWMLPSSFVSQLLHGEVIVSDSL 124 Query: 128 QQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSR 187 + W+ ++ + I+EI ++R S+ + + ++ Sbjct: 125 YACDKELTQIWETDIKRNAPLLTSQVINEIRGRIRRMSIEDYSTFELANRVAKQEDKPVF 184 Query: 188 HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH 247 ++ ML +IA+NYDQ +TI +V+ L+ NYAM +F RVM++++KQYI +R+ H Sbjct: 185 GGLNHIQTMLRYIADNYDQKITIENVSTSTGLHKNYAMKLFNRVMKVSIKQYINQLRLQH 244 Query: 248 VRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 +ALL DT +L+IAL AGF S SRFY F + GMSP ++R+ Sbjct: 245 AQALLIDTQSPVLNIALEAGFGSVSRFYDIFQREFGMSPLEFRRK 289 >UniRef50_C4L876 Transcriptional regulator, AraC family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L876_TOLAT Length = 300 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 123/280 (43%), Positives = 178/280 (63%) Query: 11 DEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQ 70 + SPLS + + +EFR P MP HWH QVEVN+PF G V YLIN++ + + + Sbjct: 2 QDPTEISPLSWLQADEVLSVEFRQPGDMPGYHWHRQVEVNIPFGGPVRYLINDQLIQLPE 61 Query: 71 GHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL 130 GHI LFW PH+L + C M + N+P+ FL P+D L+N V HG V+ S A Sbjct: 62 GHIGLFWGVIPHRLIECENCTQMGVINIPLSRFLGLPVDDLLLNKVLHGSVVISTAKDLF 121 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 E+RRW + + + QL +EI LM+KR ++SGWE +L + H ++ Sbjct: 122 GSHELRRWHNDSLCHSHGLYQLMQEEITLMIKRVAVSGWEELLHTSPGKLHSLQMNERKI 181 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 Y+ QML FIAE+Y +A+ +N+VA V+L+ NYAM +F++VM ++K +IT M++NH RA Sbjct: 182 RYIQQMLSFIAEHYHEAIRVNEVAAKVQLHPNYAMNLFKQVMGYSIKDHITMMKVNHARA 241 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 LL++T++SILDI+LT GF + SRFY +F K VG++P QYR Sbjct: 242 LLAETNRSILDISLTTGFSAMSRFYESFHKLVGVTPHQYR 281 >UniRef50_B1ZNN6 Transcriptional regulator, AraC family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZNN6_OPITP Length = 287 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 86/279 (30%), Positives = 132/279 (47%), Gaps = 2/279 (0%) Query: 18 PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFW 77 P + P MP H ++E+N+ G V YL+ KV I GH+T FW Sbjct: 6 PARVDFAPYGFTCVRWQPSRMPRPDHHNELELNLLPGGSVTYLLGGRKVKIEAGHLTTFW 65 Query: 78 ACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVI--KSLATQQLSPFEV 135 A PHQ+ D G + +P+ FL W L + + HG V+ S+A L Sbjct: 66 AAIPHQVLDYGAAPDYFVATIPLVWFLQWNLPPRFVQRILHGEVLADPSIALASLDHSLF 125 Query: 136 RRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ 195 RW +L+ + + + EI L R + + + R ++ V Q Sbjct: 126 TRWVGDLSHASPAVVRFVSLEIEARLLRLANALPDEPSATAPRRRARSVPEAGGLNRVEQ 185 Query: 196 MLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT 255 + FIA Y + L I+D+A L+ NYAM +F+R T+ Y+T RI+H + LL + Sbjct: 186 IACFIARRYREKLRIDDIAAAAGLHPNYAMNLFRRTFGTTLGDYLTHHRISHAQRLLVTS 245 Query: 256 DKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 D+ I+D+AL +GF S SRF F + G SP++YR+ + Sbjct: 246 DEKIIDVALVSGFTSLSRFNEAFRRACGCSPREYRRQHR 284 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 123/301 (40%), Gaps = 17/301 (5%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M+ + P+SLY + AP + HWH ++E+ + +G + Sbjct: 1 MDKSLLKEARKHGNPIYPVSLYE----ITCPSDAP--LLDLHWHDELELLLVTEGTAVFR 54 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 ++ + + G + H G + +F S I+++ Sbjct: 55 VDLQDYELQAGEAIFVNSGELHSGYVVGGKP----CSFDAVVFHSSLFSSGSIDYLFDRY 110 Query: 121 VIKSLATQQLSPFEVRRW---QQELNSPNEQIRQLAIDE---IGLMLKRFSLSGWEPIL- 173 + L + P +RR EL + +QI ++ +E L +K S ++ Sbjct: 111 ISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVS 170 Query: 174 VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQ 233 + K S K + + ++ +I +NY + + + +AE +++ +Y F+R+ Sbjct: 171 LGKPSVRVKPEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITT 230 Query: 234 LTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 + +Y+ + R+ + L TD I+++AL GF S S F + F + G +P++YR Sbjct: 231 KSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRL 290 Query: 294 Q 294 Q Sbjct: 291 Q 291 >UniRef50_C6B664 Transcriptional regulator, AraC family n=2 Tax=Rhizobium leguminosarum RepID=C6B664_RHILS Length = 288 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 2/275 (0%) Query: 27 RMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD 86 + IE M HWH VE+N+ +G + YL N + + G + LFWA PHQ Sbjct: 16 QFLIERHIADAMAAPHWHDHVELNLLMEGRMTYLFNGRQEQVEAGRLVLFWAAIPHQTIA 75 Query: 87 TGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPN 146 + LP+ FL P+D+ + G + + + + RW++E + Sbjct: 76 VAENAPLVCLYLPLIDFLGLPVDRKARQSIMQGRFLAQANQETMDALTLPRWEKEWQFGS 135 Query: 147 EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 R+L ++E+ L ++R L + N + S++ A +V ++ I Y Sbjct: 136 AARRKLIVEEVRLRIRRLILD--NAEIDNSPTHVSPTSLAGQAVRHVELLIDLINTRYAD 193 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 +++ D+A+ +++ + A F++V+ +++ +Y+T RI LL+DT+ +L I Sbjct: 194 PISVADLAKLAEMHPSTANSAFRKVLGISVNEYLTRHRIARAMQLLTDTEDPVLQIGFDC 253 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFP 301 GF SSSRFY F + G +P+ +R+ R P Sbjct: 254 GFGSSSRFYEIFKERTGTTPRHFREAVNSRNTPAP 288 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 102/291 (35%), Gaps = 10/291 (3%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M+ + P Y + P HWH ++E+ G Sbjct: 1 MHYIKYKEIKHHGTADFPAGYY------HVTESHPQYAMPYHWHEELELIHIISGTFHVT 54 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 IN N G I L + H T + P+ L S + +N + Sbjct: 55 INETTRNAVPGDILLVNSGGLHGGTPYDCVYECLV--FPVSLLSSQTYASEFLNRLDRQD 112 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 +I + + L + + + + +L +F + + ++ Sbjct: 113 LILDEYFPAGDDTAIHSLLERLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKS 172 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 + + + + +L +I +Y + +T++++A +++ Y F + T Y+ Sbjct: 173 --DLSTHRNIYLLKNVLNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYV 230 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 R+ LL+ SI DIA+ GF S F F KY G+SP QY K Sbjct: 231 NYYRVERACCLLAGIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPGQYLK 281 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 107/283 (37%), Gaps = 18/283 (6%) Query: 21 LYSEYQRMEIEFRAP--HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWA 78 +E + E A M SH+H E+ G +++I + + + +F Sbjct: 8 FMAEGRPFASERIAGVNDNMVRSHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPP 67 Query: 79 CTPH-QLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRR 137 H + + + S + + L + + + Sbjct: 68 FVMHHSFEENDVPFRRLLLYFNPEVIRSPQILRTLSERA------RVYKLPRAQSAPIYN 121 Query: 138 WQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQML 197 +++ E+ + + I LM+ +L R + + V+ ++ Sbjct: 122 LMKDILQEQERDDLYSRELITLMVNALALQL---------VRNSDEAARPEQRNRVTDII 172 Query: 198 GFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDK 257 ++ E++ + +T+ +A H ++ + F+R T+ QYI +R+ H + LL ++D Sbjct: 173 NYLHEHFTEDITLEQLANHFYVSQYHLCREFKRYTSSTIVQYIHNLRVLHAQRLLQESDY 232 Query: 258 SILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 SI +I+ GF + + F + GMSP Q ++ +R + Sbjct: 233 SITEISKRVGFSNVTHFNRVYKSVTGMSPSQNKQAYLKRGKPA 275 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 125/311 (40%), Gaps = 20/311 (6%) Query: 4 DTFMCSSDEKQTRS------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDV 57 + S K+T + LY+ + + P HWH + E+ G V Sbjct: 5 EKMDLDSSLKETITYESQMLHYGLYTAGYQRVFQADIP-----WHWHDEFELGYISGGSV 59 Query: 58 EYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI-FNLPMHLFL----SWPLDKDL 112 Y + V +++G + H L C+ + FL LD Sbjct: 60 VYQTSGLTVTLHEGDGIFINSGVLHYLHPLEPCREARLQTQFFDKSFLAGSLGSLLDIKY 119 Query: 113 INHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPI 172 + V ++++ + P E ++ + L L+ WE I Sbjct: 120 VAPVLDQRQLEAVPLYRSDPESKGFL--ECLQKGVELCSRKEEFFELRLRNLFSELWESI 177 Query: 173 LVNKTSRTHKNSVSRHA--QFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQR 230 + R + + QM+ ++ ++ + ++++ +A + ++ +FQ Sbjct: 178 YRWAAQKESSTPSLRRSIEDDRIKQMMRYVQAHFSEKISVSSIAASIPISERECYRLFQN 237 Query: 231 VMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 M +T +Y+ ++R+ + ++LL +T+KSILDIAL GF SSS F F + ++P QYR Sbjct: 238 SMGITPIEYLISVRLQNAQSLLMNTNKSILDIALETGFGSSSYFGKIFRSHHRLTPAQYR 297 Query: 291 KLSQQRRQTFP 301 LS+Q+ P Sbjct: 298 NLSRQKALAAP 308 >UniRef50_B9JGQ4 Transcriptional regulator protein n=4 Tax=Rhizobiales RepID=B9JGQ4_AGRRK Length = 312 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 7/296 (2%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQR--MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVE 58 M ++ P + E +++ P +M HWH QVE+N G V Sbjct: 1 MAKSKV----GDRAVYQPGASSIEGLPTTLQMFHTHPPLMAKPHWHAQVEINYIMRGTVH 56 Query: 59 YLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTH 118 Y +N+ +V + G I LFW PHQ+ D+ A +LP+ F L D+ + Sbjct: 57 YRMNDHEVQLQAGDICLFWGGQPHQMDDSSEDSIYAGAHLPLVHFFRMRLPLDISGRLMR 116 Query: 119 GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTS 178 G ++ + AT RW + S + A+ E+ L L+R + + +L K Sbjct: 117 GQILVTSATDAADNENFARWHRYAVSGDPAKAGHAVAELLLRLERIAFEPYL-MLPEKRE 175 Query: 179 RTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQ 238 V + +++M FIA N+ + D+A+ L+ YAM +F++ +T+ + Sbjct: 176 PEMGGQVHPQSSRSLARMCDFIAGNFLHDIDTVDIAKAADLHPKYAMNLFKKCTGMTLSK 235 Query: 239 YITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 Y+ +R++ +A+L ++L +A+ +GF S S F +F GM+P +R+ + Sbjct: 236 YVNLLRLSRAQAMLMRDGANVLQVAMDSGFGSISAFNKSFRHIAGMTPSDFRRDMR 291 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 117/297 (39%), Gaps = 9/297 (3%) Query: 1 MNTDTFMCSSDEKQTRSPLSLY---SEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDV 57 MN F+ + K+ + + Y + R+ H HWH + + +G+ Sbjct: 1 MNNYHFLIDYNLKELTEHSTTTWSIALYHTKICDHRSGH--IPLHWHDEFQFVFILEGEA 58 Query: 58 EYLINNEKVNINQGHITLFWACTPHQLTD-TGTCQSMAIFNLPMHLFLSWPLDKDLINHV 116 E+ IN E + + +G H D GT + N+ H + L ++ Sbjct: 59 EFHINEETICLKEGDGVFINCGCLHMAKDANGTTCTYLCLNVSPHFITANELFTTFVHPY 118 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNK 176 H + + + +Q +++ L L ++ W+ +L N Sbjct: 119 MHASQTPYILLNRKDHWPNHIYQ--CIQTIQRLIDETPAYYELELNIQLITMWKCLLQNG 176 Query: 177 TSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 + ++ + ML +I ++Y + + + D+A +L+ + F+ +++ T Sbjct: 177 FQIKY-DARQHDKNERMKPMLNWIHQHYHEKVLLQDIARAGQLSRSECCRYFKDILKKTP 235 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 Y+ R+ LL +TD +I +IA GF S+S F S F + +P YRKL Sbjct: 236 LHYVNEYRVQQSLILLQETDFNITEIAYKVGFNSTSYFISMFKRIKNTTPLAYRKLK 292 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 107/277 (38%), Gaps = 7/277 (2%) Query: 25 YQRMEIEFRAPHI-MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ 83 Y ME + R + M H H E+ G+ Y I + + G + H+ Sbjct: 15 YLSMEYDRRIGYFSMSADHLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHK 74 Query: 84 LTDTGTCQS-MAIFNLPMHLFLSWPLDKDLINHVTHGMV--IKSLATQQLSPFEVRRWQQ 140 D+G + + LF + +L + + L + V R Sbjct: 75 TLDSGRPDHDRLVLYINPELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVERMVG 134 Query: 141 ELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFI 200 ++ + + + + L + + V ++ ++ Sbjct: 135 DMVNEMIHPQAGSSWLLRHRTVELLLFAYRSRHLGMVRSADTEPVLHPKT---QAVVRYL 191 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 +NY QALT+ +VAE +++ +Y +F++ T Y+ +R+ + LL ++D SI Sbjct: 192 NDNYRQALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSIT 251 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 DIA +GF + S F F + V +SP+ YR+ + R Sbjct: 252 DIAWRSGFSNFSHFGKMFKRTVQLSPRAYRQQYRMRS 288 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 109/298 (36%), Gaps = 13/298 (4%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 + + + + P + Y ++ + HWH +E+ G Sbjct: 4 LEYENLLENKTHADPMFPYNTYLCSIPLDFN------SVSLHWHEFMEIIYIKKGKGNVT 57 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQ-SMAIFNLPMHLFLS---WPLDKDLINHV 116 ++ + +G I + H ++ + +F S LD + + Sbjct: 58 VDFTTHYVEEGDIIIILPGHIHGISQHEGYSMEYENILFSVDMFRSKNHDSLDSEFFLPL 117 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNK 176 G V + P + + +++ L LK + + N Sbjct: 118 LAGDVDIKSIYDKDDPLYPQ--LSSCLNRVDKLCSETPKGYHLALKGCYFEFFYVLFTNS 175 Query: 177 TSRTHKNSVSRHAQ-FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLT 235 T R + +R +L +I ENY +A++I D+A + + ++ M F+ M ++ Sbjct: 176 TVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDIASYCGFSESHFMRFFKNTMGVS 235 Query: 236 MKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 Y+ R+N LLS D S+L +A GF + S F F K G++P +YR+ Sbjct: 236 FVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFNRMFKKKYGVTPSRYRETH 293 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 100/294 (34%), Gaps = 12/294 (4%) Query: 3 TDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLIN 62 + S+ R P Y +F + SHWH + E+ +G+V + I+ Sbjct: 6 RQSLKESTVHGNERFPFGAY------WYQFAPGAHVVDSHWHKEAEIFYVMEGEVLFQID 59 Query: 63 NEKVNINQGHITLFWACTPHQLTDTGTCQSMAI-FNLPMHLFLSWPLD---KDLINHVTH 118 +E + + G H G + + S D + +I Sbjct: 60 SEYIPVRAGEAIFIDGGDLHTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQE 119 Query: 119 GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTS 178 + + +E+ ++ I L + S Sbjct: 120 RRAAFPRRMTSGTDERLLEHIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRS 179 Query: 179 RTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQ 238 R+ + + +++ +I +Y + + ++++A+ + ++ F+ + T Sbjct: 180 RSE--AADMTRTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVD 237 Query: 239 YITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 Y+ + R+ LL D I DIAL GF S F F K + +P +YRK Sbjct: 238 YMNSYRVRQAAELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKK 291 >UniRef50_Q7US19 Melibiose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7US19_RHOBA Length = 285 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 13/289 (4%) Query: 6 FMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEK 65 + S + T P E P MP + H ++EVN G + YL+ + Sbjct: 8 ILRSMKQFDTTRP---EFAPYGFTCERWTPVAMPRADRHSEIEVNFLASGSLTYLVGGHR 64 Query: 66 VNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSL 125 I+ G + LFWA PHQ+ + + LP++ F+ +D D++N G V+ S Sbjct: 65 DTIHAGQMGLFWAAVPHQIVEFDGDDPYFVVTLPLNEFMRSGIDADIVNRTLQGEVLISS 124 Query: 126 ATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSV 185 + +RW+ +L S + + + A EI L RF+ Sbjct: 125 VQDERDSASFQRWESDLASQDPALARAAQLEIQARLLRFA----------HDKSIGGTGE 174 Query: 186 SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRI 245 Q+ +IA ++ Q LT +A V L+ NYAM +F++ +++ +IT R+ Sbjct: 175 PMEDLSSADQLACYIARHFHQPLTSEAIANAVDLHPNYAMTLFRKTFGISITSFITQHRL 234 Query: 246 NHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 + + LL T++S+LD++L +GF+S SRF F K G SP+++R + Sbjct: 235 SEAQRLLVTTNRSVLDVSLASGFQSLSRFNEVFRKACGCSPRKFRANHR 283 >UniRef50_B6A4E8 Transcriptional regulator, AraC family n=11 Tax=Rhizobiaceae RepID=B6A4E8_RHILW Length = 306 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 130/264 (49%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 +++ P +M HWH QVEVN G V Y +++ + +N G + LFW PHQ+ ++ Sbjct: 28 LQMFHAHPPVMAMPHWHAQVEVNYVIRGSVHYRMSDHEFRLNAGEMCLFWGGQPHQMDES 87 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 A +LP+ F L + + + G + + AT RW + NS N Sbjct: 88 SDDSLYAGAHLPLVYFFRLRLPISISSRLMKGETLLTSATDAADVDNFARWFRYANSGNP 147 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 Q A+DE+ L ++R +L + + H+ V++M FIA N+ Q Sbjct: 148 AKAQHAVDELLLRIERIALEPYSMTTSKTAVSLESDQPHPHSSRSVARMCDFIAANFLQD 207 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 + D+A L+ YAM +F+R +T+ +Y+T +R++ +A+L ++L +A+ +G Sbjct: 208 IDSVDIARAADLHPKYAMNLFKRTTGMTLSKYVTLLRLSRAQAMLMSEGANVLQVAMDSG 267 Query: 268 FRSSSRFYSTFGKYVGMSPQQYRK 291 F S S F +F GMSP +R+ Sbjct: 268 FGSISAFNKSFRHIAGMSPSDFRR 291 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 94/261 (36%), Gaps = 8/261 (3%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ-SMA 94 HWH +E+ G ++ E G + + H ++ G+ Sbjct: 78 FRQVPVHWHEDMEIIAVKKGRGVVTVDMEPYEARAGEAVVVFPGQLHGISQCGSEAMEYE 137 Query: 95 IFNLPMHLFLSWPLDK---DLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQ 151 + +S D D + +T G + K L P E +Q+ Sbjct: 138 NIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLPDYGAFM--ECIGILDQLCG 195 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 + +K W L+ R ++ + ++L ++ E+Y + +T+ Sbjct: 196 KKNYAYQMGVKGTLF--WFLGLIAGIWGPEAAGQPRKSRERMKRLLEYMEEHYGEKITVE 253 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D AE + ++ M F++ M + QY+ R+ +L T + +A GF + Sbjct: 254 DGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTPDPVTAVAQRCGFDNI 313 Query: 272 SRFYSTFGKYVGMSPQQYRKL 292 S F F + G +P +YRK Sbjct: 314 SYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 98/296 (33%), Gaps = 15/296 (5%) Query: 1 MNTD-TFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEY 59 M + + R P +LY + + HWH +E+ G Sbjct: 1 MQNQASLQETKQHGAVRFPFNLYPCTIPGDFQ------QVALHWHESMELVFVKQGMGLV 54 Query: 60 LINNEKVNINQGHITLFWACTPHQLTDTGTCQ-SMAIFNLPMHLF--LSWPLDKDLINHV 116 + +G I +F T H L + L + + + Sbjct: 55 QVGVVTYPAYRGDIFIFAPGTLHALRQAEGQRMEYENIIFEPELLGGAEDLCAEKYLLPL 114 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNK 176 G + + ++ E + L++K L ++ Sbjct: 115 QSGRLSLPVRLTPNDLCYLQAAA--CLRELEDANRAKRPGYELLVKGALLRFLALLIAQG 172 Query: 177 TSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 S + +L +++ +Y + L + D A +A++ M F+++ + Sbjct: 173 RQCL---STETADTQRLKTVLQWLSAHYAEPLRVADAAGVCSFSASHFMRWFRQMTGQSF 229 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 ++ R+N L TD+++L IA GF + S F F + GM+P+ YRK Sbjct: 230 IAFLNEYRLNTAAEALRTTDETVLTIASRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_Q7UU63 Melibiose operon regulatory protein n=1 Tax=Rhodopirellula baltica RepID=Q7UU63_RHOBA Length = 289 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 3/272 (1%) Query: 26 QRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT 85 E P MP H ++E+N G + YLI ++ ++ +TLFWA PHQ+ Sbjct: 14 YGFTCEVWEPVPMPRPDRHDEIEINFLDSGSLTYLIGGNRITVDAHTLTLFWAAVPHQII 73 Query: 86 DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQ---LSPFEVRRWQQEL 142 + + +P FL W L + L + G V+ + + F +W ++ Sbjct: 74 EFRDVTHYYVITIPFGWFLQWGLPESLQTQLILGNVLSGKSDPKTAVRDKFLFEQWHSDV 133 Query: 143 NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 + E R+ + E+ L R + S ++ ++ R + S M IA Sbjct: 134 SIDPEDTREFVLLELKARLLRLARSYFKNPALSSDDREARLRNSSPNLAKAELMACHIAR 193 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 N+ L I D+AE V L+ +YA +F++ LT+ IT R+ + LL ++ I+DI Sbjct: 194 NFKSRLQIKDIAECVDLHPDYASTLFRKTFGLTLNGLITRHRVAEAQRLLISSNDQIIDI 253 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 A AGF S SRF F + GM+P+ +RK + Sbjct: 254 AFAAGFDSLSRFNRAFKETTGMTPRGFRKECR 285 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 110/265 (41%), Gaps = 11/265 (4%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT---CQS 92 M H+H E+ G+ Y I ++ I G + L H+ + +G Sbjct: 25 FSMDGEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQPHE 84 Query: 93 MAIFNLPMHLF--LSWPLDKDLINHVTHGMVIK-SLATQQLSPFEVRRWQQELNSPNEQI 149 + N + L +++L V++ S QQL + R E ++ Sbjct: 85 RILVNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLAE-----QKQ 139 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 + +E +L L + + + + + ++++ +I +YD+ L+ Sbjct: 140 QAGGYEEYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLS 199 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++D+A L+ Y +F RV LT+ YI +RI ALL +T+ + +IA G++ Sbjct: 200 LSDLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQ 259 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQ 294 S + F F K +SPQ YR+ + Sbjct: 260 SGTHFGRVFKKAKAVSPQSYRREQR 284 >UniRef50_B5JCW6 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCW6_9BACT Length = 290 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 11/288 (3%) Query: 9 SSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNI 68 E+ P L P M H +VE+N+ G V Y++ KVN+ Sbjct: 4 FDPERPDFKPYGLTCVNWN-------PSPMGRPDHHNEVELNLMRSGWVSYMLGGAKVNL 56 Query: 69 NQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQ 128 G + FWA PHQ+ D G+ + +P FL + L + G +I Sbjct: 57 LAGDLGAFWASIPHQVIDYGSDTEYFVVTIPFAWFLQFSLPNQFTQTLLKGTLITEPLNG 116 Query: 129 QL--SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSV- 185 +L +W+Q+L + ++ + + + E+ L+R +L + L+ + T + Sbjct: 117 KLTTESERFAQWEQDLANNRDESQDIVLLELQARLQRMALYAKQEKLITTSVDTLSPTSV 176 Query: 186 -SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMR 244 + V Q+ IA+ Y + LT + + V L+ NYAM +F++ T+ YIT R Sbjct: 177 IADGGLNKVEQIACLIAQRYLEPLTAETIGQAVGLHPNYAMNLFKKTFGTTLVDYITNHR 236 Query: 245 INHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 I+H + LL TD+ ILDIA+ +GF + SRF F + G +P++YRK Sbjct: 237 ISHAQRLLVTTDQKILDIAMNSGFNTLSRFNEAFRRCCGFTPREYRKN 284 >UniRef50_A4BGH9 Regulator of melibiose operon n=1 Tax=Reinekea blandensis MED297 RepID=A4BGH9_9GAMM Length = 289 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 102/295 (34%), Positives = 157/295 (53%), Gaps = 7/295 (2%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M + Q P++ + +E R P M +HWH +EVN+P+ VEY Sbjct: 1 MQEEKVY------QPNDPVNPLFVQDNIYVEEREPECMAQAHWHSHIEVNIPYGDGVEYD 54 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 IN + + + H+ LFWA PHQLT+ G C+ M I +PM ++W + L + Sbjct: 55 INGKFFRLPERHLGLFWAAIPHQLTNPGKCREMFIAYIPMQTIIAWSQLQRLYRDIVSQA 114 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 V+ S + ++RR E N ++ ++ + DE+ LMLKR S G E ++ Sbjct: 115 VLHSRVEYPMPIDQMRRLVDEFNRNDDALKAVVNDELQLMLKRASAYGLEQLVEPVIDSD 174 Query: 181 HKNSVSRHAQ-FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 R +Q + ML FIA NY Q + + DVAEHV L+ YAM +F+ ++ + MKQY Sbjct: 175 DSVKEKRTSQSQKIQAMLEFIASNYKQPIAVTDVAEHVHLHPKYAMQMFKNLIGIPMKQY 234 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 I MR+ + LL DT++SI+DIALT GF S++RFY F +Y +P+++R + Sbjct: 235 INRMRLMTAKDLLRDTERSIMDIALTVGFNSNNRFYIVFRQYEQCTPKEFRNRYR 289 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 111/299 (37%), Gaps = 20/299 (6%) Query: 1 MNTDTFMCSSDEKQTR---SPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDV 57 M+ + + K P + Y ++ + HWH +VE+ V G Sbjct: 6 MDKLQYKIYHENKIHTPDDFPYNTYLCSIPLDFQ------SVNLHWHDEVEIIVIKKGSG 59 Query: 58 EYLINNEKVNINQGHITLFWACTPHQLTDTGTC-QSMAIFNLPMHLFLSWPLD---KDLI 113 ++ +++ G I H ++ L S D I Sbjct: 60 IVSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIMEYENILFKSSLLKSSGYDLCNDKFI 119 Query: 114 NHVTHGMVIKSLATQQLSPFE--VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEP 171 + G + +P+ V E++ + I L + + Sbjct: 120 QPLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQLSIKAHLFQILYT---- 175 Query: 172 ILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 LV+ + +++ + + +L +IA N+ + + I D+A + + +Y M F+ Sbjct: 176 -LVSNCGQNKIKPINQKSLKKIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKET 234 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 M ++ QY+ R+ LL+ T +ILDIA GF + S F F K G+SP++YR Sbjct: 235 MGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 112/294 (38%), Gaps = 6/294 (2%) Query: 5 TFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNE 64 +S ++ + SE+ E HWH E+ G ++ +N+ Sbjct: 7 NVTVNSSGEEVQKHG--TSEFPIAFYEENLSSYSIPWHWHEDFEIIWVISGSIKVSVNST 64 Query: 65 KVNINQGHITLFWACTPHQLTDTGTCQSM---AIFNLPMHLFLSWPLDKDLINHVTHGMV 121 + +N+ A H + T + + +F+ + + ++ I + Sbjct: 65 EHILNKNQGIFINAGFLHSIHATNDGEYVLRSIVFHPRLIGSIDSIYWQNYIEPIIQNKN 124 Query: 122 IKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTH 181 + + ++ + ++ N EI + S + + Sbjct: 125 LPYILLDPFINWQDKILAYSISVWNRLYNTENGFEIYVR-NELSQLILIVLTNHSICEAK 183 Query: 182 KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYIT 241 + + + ML +I ++ + +TI+ +A ++ + + F R + T QY+ Sbjct: 184 PSIRNLRNADRIKTMLQYIQMHFSETITISTLARVALISESEVLRCFHRTIHSTPNQYLK 243 Query: 242 AMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 RI +L DTD + +DIA GF+SSS F TF + +G +P +YRK QQ Sbjct: 244 QYRIQKACQMLIDTDMTSIDIAFQCGFQSSSYFTKTFREQIGCTPLEYRKRDQQ 297 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 94/297 (31%), Gaps = 11/297 (3%) Query: 3 TDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLIN 62 + S R P Y + + HWH + E +G+ + ++ Sbjct: 6 RRSLKESKSHGNERQPFGTY------WYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVD 59 Query: 63 NEKVNINQGHITLFWACTPHQLTDTGT-CQSMAIFNLPMHLFLSWPLD---KDLINHVTH 118 + + G H G + L S D ++L+ + Sbjct: 60 TDYFPVGAGEAVFIDGGDIHAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQE 119 Query: 119 GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSG-WEPILVNKT 177 ++ + ++ + + + E + F + Sbjct: 120 RKATFPRHIRRETAADLSLLEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVN 179 Query: 178 SRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMK 237 + + ++ I NY + + ++A + ++ F+ + + T Sbjct: 180 RSHSSSRSESSKIDRLKTVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPM 239 Query: 238 QYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 YI + RI LL + ++ I DIAL GF + S F F K + SP ++RK Q Sbjct: 240 DYINSYRIRQAAELLREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQ 296 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 105/284 (36%), Gaps = 6/284 (2%) Query: 9 SSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNI 68 +E + R E+ I+ P + + HWH + E+ +G + ++ + Sbjct: 5 DHNEDRPRGTYEFPFEFH--HIDHTHPRYVMSYHWHVEYEIIRILEGSLTVTLDEKSFTA 62 Query: 69 NQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQ 128 + + + H +F++ + P+ + I + H + Sbjct: 63 VKNDVIFVHSGILHSGIPHDCVYQCIVFDMNT-FLKNNPVCGEYIQKILHQETMLFPHFS 121 Query: 129 QLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 P + ++ E+ + G F L + +RT + Sbjct: 122 DEHPQILNCISVLFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRR---DYK 178 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 + Q+L FI +NY +T+ +++ V ++ Y F + T Y+ RI Sbjct: 179 RILQLKQVLEFIEKNYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEA 238 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 L+ TD SI +IA GF S F TF KY GM+P +Y++ Sbjct: 239 CLQLAATDDSITEIAYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 118/294 (40%), Gaps = 10/294 (3%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M D ++ + P ++Y ++ ++ HWH ++E G+ E+ Sbjct: 1 MKDDQWLEARAHGDPMFPCNVYR------VKEVNGQVIIHCHWHHEMEWIYMEAGEAEFQ 54 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 I + + G + H + F+S DLI Sbjct: 55 IGTKMTTVRAGEGLFIPSGHLHGAYPVSDKPFSLYATVVHPDFISS-FGYDLIQSRYIDP 113 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQ---IRQLAIDEIGLMLKRFSLSGWEPILVNKT 177 S T + W ++ + + Q + L++K L ++ + Sbjct: 114 FKDSERTGPIKLCPTHYWMSDMLTMLQATISQFQQKEEGYELVIKANLLQMMAELVKHFP 173 Query: 178 SRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMK 237 + + + + ++L FI E+YD+ LTI +A V+++ + F+ ++++T Sbjct: 174 RTEEQKTGTPQQIRQIKKVLQFIDEHYDEKLTIKQLANLVQMSEGHFSRFFKSIVRMTAV 233 Query: 238 QYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 +YI R+N LL +TD++I+DI+++ GF S F F ++ +P ++R+ Sbjct: 234 EYIHTQRLNKAARLLRETDRTIMDISMSVGFDHPSYFIKLFKRHKRCTPSEFRR 287 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 94/255 (36%), Gaps = 10/255 (3%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH + E+ G + ++ ++ + + H + AI Sbjct: 36 PHWHDEFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGKAEDNPEPYAIVFSLS 95 Query: 101 HLFLSWP--LDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 LF P + V+ ++ + + +EL S + + Sbjct: 96 MLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHT-------RELISNIITVWKEKPKGYE 148 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVS-RHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 L++K + + + + + L FI NY + I+ +A+ Sbjct: 149 LLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDIDIDLLAKLA 208 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 L+ Y +F+ + LT YI R+ L+ +T+ SI +IA GF + S F Sbjct: 209 NLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFIKV 268 Query: 278 FGKYVGMSPQQYRKL 292 F +YVG++P +Y+K Sbjct: 269 FKEYVGVTPFKYKKN 283 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 118/293 (40%), Gaps = 14/293 (4%) Query: 3 TDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLIN 62 + PL ++ + F + + HWH + E+ G ++ ++ Sbjct: 6 KELIESDVSHGTPDFPLFVHEDI------FVYRNGVVNPHWHNEFEILYMERGIGKFYVD 59 Query: 63 NEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVI 122 + +N+G + + H + + L S D + H + Sbjct: 60 GYEYKLNEGEYLFVNSGSIHSGLEMIKRSIGYAIVFDLRLLYSEEPD-----YCKHEYFL 114 Query: 123 KSLATQQLSPFEV--RRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 + + P + + ++ E ++ + L +K + + R Sbjct: 115 PLINKRYHIPSNLNDEHIRNDICRIIEVFKEKSYG-YELYIKSLLFDIFWRVFKYYAERR 173 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 +++ + + +L +I +NY++ L++++++ V ++ Y +F+ ++++ +YI Sbjct: 174 NQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYI 233 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 +R++ LL +TD S+ +IA GF + S F F KY+ +P ++RK + Sbjct: 234 NKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQN 286 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 119/301 (39%), Gaps = 16/301 (5%) Query: 1 MNTDTFMCSSDEKQTR---SPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDV 57 M + + + K+ P + Y ++ + HWH +VE+ V G Sbjct: 1 MEKNQYEIYHENKKHTPNDFPYNTYLCSIPLDFK------SVNLHWHNEVELIVIKKGQG 54 Query: 58 EYLINNEKVNINQGHITLFWACTPHQLTDTG-TCQSMAIFNLPMHLFLSWPLD---KDLI 113 +N +N G + + H ++ + L S D I Sbjct: 55 LVNVNLVTYTVNAGDVVFVFPGQLHSISQKDYSIMEYENILFKSSLLKSSGYDLCNDKFI 114 Query: 114 NHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPIL 173 + G + ++ S F+ L + +++ L +K + + ++ Sbjct: 115 QPLLSGNL--NIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQLAVKSYLFQIFYLLI 172 Query: 174 VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQ 233 N K +S+ A + +L ++AE++ ++I ++A H + +Y M F+ M Sbjct: 173 SNCGLNQIKP-ISKKALEKIKTILSYVAEHFQDNISIEEIAGHCFYSKSYFMKFFKETMG 231 Query: 234 LTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 ++ QY+ R+ LL+ T I++IA+ GF + S F F K G++P +YRK + Sbjct: 232 MSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFKKKYGITPGKYRKDA 291 Query: 294 Q 294 + Sbjct: 292 R 292 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 97/294 (32%), Gaps = 11/294 (3%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 ++ + S E + I P + HWH +E+ G Sbjct: 82 LDRKKELESFQETKKHGSTMFPFNIYPCTIPGDFPSV--ALHWHKSMEIIFVKKGTGRIQ 139 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWP----LDKDLINHV 116 G I + T H + + FL DK+ + + Sbjct: 140 TGRNMQEARSGDIFVMPPGTLHAIYAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPL 199 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNK 176 G +++ + + E++ L +K L +L Sbjct: 200 ASGQLLQPAVFSPVDAGY--KQISACLRRAEELCSARERGYELGVKAALLELLLYLLRMC 257 Query: 177 TSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 + ++L I ++Y + LT+ D+A ++++ M F+R+ + Sbjct: 258 P---EAPERDTPDMERLKRVLQRIEQDYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSP 314 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 Y+ R+ L +TD IL IA AGF + S F F K G++P+ YR Sbjct: 315 LAYLNERRLAAAAENLRETDDKILVIAENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 7/257 (2%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT--CQSMAIF 96 HWH + E G + Y I +++ + G + H C++ + Sbjct: 35 FYLHWHSEFEFVYILSGAILYSIEDKEYCVKAGEGLFIHSNQLHAARSFNGMPCEACVVL 94 Query: 97 NLPMHLFLS--WPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 P + I + G ++ + E +R +L S + ++ + Sbjct: 95 FHPNLFGHNKQSSTYSKFIYPILEGDLVFENYFK--CEEEWQRLVMKLLSELDDLKYENV 152 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH-AQFYVSQMLGFIAENYDQALTINDV 213 E L+LK W N + + +R+ + +L +I ENY + +T+ + Sbjct: 153 SENELLLKSKIFEIWHLCYKNSVALAPQGRKNRNYKLERMQPVLNYIHENYKEEITLMAL 212 Query: 214 AEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSR 273 A+ + ++ F+ VM ++ Y+ RI LL++TD I DIA GF + S Sbjct: 213 AKILPMSEGQFCHAFKEVMNISPIAYVIRHRILQSCTLLTETDWKIADIARNVGFNNISY 272 Query: 274 FYSTFGKYVGMSPQQYR 290 F F K +G SP +YR Sbjct: 273 FNREFIKAIGCSPSKYR 289 >UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2G6_9CLOT Length = 299 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 119/299 (39%), Gaps = 13/299 (4%) Query: 1 MNTDTFMCSSDEKQTRSPLS----LYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGD 56 M + K+ R PL + +E+Q++ + + SHWH ++E+ V +G Sbjct: 1 MEKKKIQTDKEGKELRQPLDGKFPIAAEFQKLSY---YAYGLCISHWHPEMELLVVTEGA 57 Query: 57 VEYLINNEKVNINQGHITLFWACTPH--QLTDTGTCQSMAIFNLPMHLFLS--WPLDKDL 112 +E I E I + + H ++ + C I P L + + + Sbjct: 58 LEQRIGEETHMIRENEGVFINSHVMHGARMVNREDCSYRVIRFEPALLGGNAKSLIYEKY 117 Query: 113 INHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPI 172 + + + + + R + +++ L +++ L WE + Sbjct: 118 VKTLQSQKDLLYRIVRPEDIQQRRMIDLIYKITDTYVKREVC--YELKVQQMMLELWELL 175 Query: 173 LVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVM 232 + + L +I Y +T+ D+A L+ + +F++V Sbjct: 176 YKRTGHVEENAIQMNRELYKIQDALAYIQMYYKNPMTLEDIAGACMLSKSSCCRLFKKVF 235 Query: 233 QLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + + +Y+T+ RI L++D SI +IA +GF +SS F F K +GM+P QY+K Sbjct: 236 RQSPMEYVTSYRIQQSFMLIADDRYSITEIAYESGFTNSSYFTEMFRKVIGMTPTQYKK 294 >UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYV7_CLOB8 Length = 303 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 125/306 (40%), Gaps = 16/306 (5%) Query: 1 MNTDTFMCSSDEKQTRS------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFD 54 M + + ++T PL++Y++ + + HWH +V+ + Sbjct: 4 MQATRIEVNDNLQETVKHGSHDFPLAIYTDKFNLFEDG-----YIRWHWHKEVQFSYSLY 58 Query: 55 GDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLIN 114 V I +E++ ++ G + + HQ+ +F++ L ++ LI Sbjct: 59 DKVVVFIEDEEIILSPGEGIMINSNVLHQIKPYKNID-CMMFSIDFDSTLIGGSEESLIE 117 Query: 115 HVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE---IGLMLKRFSLSGWEP 171 +I+S + +S WQ+ + S EQ+ L+ ++ L +K + W Sbjct: 118 KKYLSPIIESNNLKFISLKPDVPWQKRILSHLEQVFILSHEKSYGYELEMKNYLSIVWLN 177 Query: 172 ILVN-KTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQR 230 ++ K + + V + +I ++Y + ++ +A ++ + F+R Sbjct: 178 LIKEIKEDIKISMPSASNDDERVKMAMQYIQKHYADNIDLDSIARAANISKSECCRSFKR 237 Query: 231 VMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 ++++T +Y+ R++ LL SI +I+L GF S F F KY SP +YR Sbjct: 238 ILKVTPFEYLMEYRVSKAAELLLKNKDSISNISLDVGFNGISYFGKVFKKYRNCSPSEYR 297 Query: 291 KLSQQR 296 +R Sbjct: 298 TKYCRR 303 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 105/293 (35%), Gaps = 17/293 (5%) Query: 6 FMCSSDEKQTRS------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEY 59 + + ++ P++ Y+E HWH + E + G + Sbjct: 23 VVADAAGREQTQHGSPLFPIACYAEDLSC--------FSVAWHWHEEFEFILAALGPIHV 74 Query: 60 LINNEKVNINQGHITLFWACTPHQLTDTGTCQ--SMAIFNLPMHLFLSWPLDKDLINHVT 117 +N ++ + G + H + +F + + + LI + Sbjct: 75 DVNKTRLTLQTGQGVFINSGALHAVEPAEGRALLHSGVFQPRLVGGMDTVFWQKLIRPLL 134 Query: 118 HGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKT 177 + P++ R+ L + + D + + + I + Sbjct: 135 QPGTPPFFLLDEAVPWQ-RQVLLCLREAWKGVADEPFDYENRVRYHLTAALRLLITQCVS 193 Query: 178 SRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMK 237 + + + A + QML ++ E+Y + LT+ +A V L+ + + F++ + +T Sbjct: 194 GKVKVSEQEQIASERMKQMLRYVEEHYAEELTVEKLAGCVALSESACLRSFRQFLGITPI 253 Query: 238 QYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 QY+ R+ LL T ++ L GF +S F TF + +P++YR Sbjct: 254 QYVKQFRVEKAAELLRSTRLKTGEVGLECGFSDASYFIKTFREIKHCTPREYR 306 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 95/292 (32%), Gaps = 12/292 (4%) Query: 14 QTRSPLSLYSEYQRMEIEFRAPHI--MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQG 71 + R + + HWH + E V G V + +E+ + G Sbjct: 52 EHRQHGDTTFHIRAYHVVLTPGPYQQTVNLHWHSEAEFIVVTRGSVCLQVGSERHVLADG 111 Query: 72 HITLFWACTPHQLTDTG-TCQSMAIFNLPMHLFLSWPLD---KDLINHVTHGMVIKS--- 124 + L H + G + L D + ++ + G ++ Sbjct: 112 DVALLSGGELHSMAAPGKGPSECKAIVFGLDLLEGPSSDRVQQSYLSPLASGKLLLPGAI 171 Query: 125 LATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNS 184 + + R + + + EQ + G + + +LV + R Sbjct: 172 AHDHPVRQYLAARLCEIVEALEEQPVGYELAVKGCLYDVLAQLFRAELLVEHSPR---RE 228 Query: 185 VSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMR 244 + + +L +I + L + D+A ++ + F+ + QY+ R Sbjct: 229 MDDRRADTLKAVLTYIDAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERR 288 Query: 245 INHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 + LL D ++SI I + GF S F F Y +P YRK ++ Sbjct: 289 VARAADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKALLKK 340 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 104/285 (36%), Gaps = 8/285 (2%) Query: 8 CSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVN 67 ++ PL +YS + + + HWH ++E G + + Sbjct: 7 ENNTHGTAVFPLQVYSHHD------KDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFT 60 Query: 68 INQGHITLFWACTPHQLTDTGTCQSMAIFNLP--MHLFLSWPLDKDLINHVTHGMVIKSL 125 ++ G + H++ G AI P + L I VT G +I Sbjct: 61 LHPGEFCFINSGELHEIKSGGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFPT 120 Query: 126 ATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSV 185 SP E + + L + + +S Sbjct: 121 LPSVFSPEESQMILFHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISSK 180 Query: 186 SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRI 245 + +Q + +++ +I ENY +++ D+A+ ++ NY F++ + +I RI Sbjct: 181 EKDSQNKLKKVIEYIHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRI 240 Query: 246 NHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +L+D++ + +A++ GF + S F F +Y ++P +YR Sbjct: 241 QKACQILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYR 285 >UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NUZ5_BACSE Length = 305 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 98/288 (34%), Gaps = 10/288 (3%) Query: 15 TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHIT 74 L + + H+H Q E+ + + ++G + Sbjct: 21 INEQLQISESNPIKARYYDYDRFTYPWHFHSQYEIIYVKKSCGRCFVGDCIECFSEGDVV 80 Query: 75 LFWACTPHQLTDTG----TCQSMAI---FNLPMHLFLSWPLDKDLINHVTHGMVIKSLAT 127 LF PH + + + F+ + D +++K Sbjct: 81 LFGPSLPHYMRSDDAYHGDNPRLRVQGTIIQFEENFMQYSFDH-YPQFHQIRVLLKEARR 139 Query: 128 QQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSR 187 + +++ S +++ +I +L S + Sbjct: 140 GVVFHTADAGAVRDMVSAFPELKGFG--QITGLLDLLQALAVSVPRRMLASPCYYEKFPT 197 Query: 188 HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH 247 + +++ FI NY ++L ++++AE +N++ F+ T QY+ MRI + Sbjct: 198 AGNKRIDKIISFINSNYTRSLKLDEIAEMANMNSSAFCRFFKDATGKTFLQYVADMRIGY 257 Query: 248 VRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 LL+ D I IA+ GF S F TF + G++P QYR + Sbjct: 258 ACKLLTIGDMEISQIAVECGFDSIPHFNRTFKQLTGLTPTQYRNQIMK 305 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 110/291 (37%), Gaps = 19/291 (6%) Query: 1 MNTDTFMCSSDEKQ-TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEY 59 M + F E++ P +Y+ + AP+ H H E+ G E Sbjct: 1 MAHEHFYVKRSERESLVQPELIYT-----GLLEDAPNWFNIQHSHDFCEILYVAGGAGEA 55 Query: 60 LINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHG 119 ++ +K + G + + T H+ + + L + F L ++ Sbjct: 56 ILEGKKFRLAPGDLVVVNPGTLHEERS-DAKAPLRLIFLAIRDFAVPGLPAGCLSQ-EKY 113 Query: 120 MVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSR 179 V+ + +R QE +S E ++++ + +L Sbjct: 114 RVLSCGEYRYKMDIYLRELLQETSSQIEFYQEISQGLVSALLVLVMRLIRIN-------- 165 Query: 180 THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 ++ ++ +N+ +T++ ++E V ++ +Y +F+ ++ +Y Sbjct: 166 ---PEDEAALSQECQKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFKEQTGVSPIKY 222 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +T+ R+ LLS+T+ + +++ G+ + F F + G+SP +YR Sbjct: 223 LTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 105/259 (40%), Gaps = 3/259 (1%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQS-MAIF 96 HWH + + + G++ + IN++ + +G H + +S Sbjct: 44 YVIWHWHDEYQFSYVTQGEIYFYINDQTFILKEGQGIFINTGCMHSIKAVNDPESTYVCI 103 Query: 97 NLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE 156 N+ LF S +I + +S LS +L + + Sbjct: 104 NIDKKLFSS--FKGSVIEQKYLNTLTQSAIFLDLSEEWHIECINKLKDIYQFYVDKSFSF 161 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 + + + S+ + ++L F+ ++Y + +T+ +A+H Sbjct: 162 EIDICINLMQTLALVVKNALNPILLTTIESKDEYQKIKKILSFLHQHYAEKITLEQIAQH 221 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 + LN N +F+R ++T+ +Y+ R+N LL +DKSI IA+ GF + S + Sbjct: 222 IFLNKNECCRLFKRKTKMTIFEYLLEHRLNKSIELLIHSDKSISQIAIDTGFSTVSYYID 281 Query: 277 TFGKYVGMSPQQYRKLSQQ 295 TF K VG++P +YRK + Sbjct: 282 TFHKNVGITPNEYRKRELK 300 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 106/302 (35%), Gaps = 14/302 (4%) Query: 2 NTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLI 61 + + P + Y + HWH ++E+ G I Sbjct: 5 DITPLKENRLHGTAAFPCACYQADSAASP--AGTPFLAKHHWHEELEIIYFEQGCFHLEI 62 Query: 62 NNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL--FLSWPLDKDLINHVTHG 119 N EK I + L + H + + MA L F + P+ + L+ + G Sbjct: 63 NMEKYEIEEECFCLIKSGDLHYIYSEKDYREMAFVFSLSMLRAFAADPVQEKLVQPLAEG 122 Query: 120 MVIKSLATQQLSPFEVRRWQQELNSPNEQ----------IRQLAIDEIGLMLKRFSLSGW 169 + + +P V ++ L + + M + SL Sbjct: 123 SLSLPGLIYRQNPCFVILKREFLQIADAAGLPSGASNLRSQYRVSSLPQYMRAKASLLNI 182 Query: 170 EPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQ 229 + + V + L ++ E+ + +T+ ++A +N Y F+ Sbjct: 183 FAAFSEQNLLAVSQMPADRRVDTVKKTLSYMQEHMTEKVTMQELAAQANMNEQYFCRFFK 242 Query: 230 RVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQY 289 +++ Y+ MRI + LL +TD S+ +IAL +GF + F TF G +P QY Sbjct: 243 KIIGRPPITYLNEMRIRYACRLLKETDHSVTEIALESGFNNLGNFMRTFRLVCGCTPLQY 302 Query: 290 RK 291 RK Sbjct: 303 RK 304 >UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z0_9FIRM Length = 302 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 97/261 (37%), Gaps = 5/261 (1%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG--TCQSMAIF 96 HWH +E G + Y +N +++ +N+G + A H C + I Sbjct: 40 APCHWHDDIEWIYIITGKMRYYVNGKRLILNEGDSLMVNARQMHYGYAFEQQDCYFLCIL 99 Query: 97 NLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE 156 P + L + ++ V+ +++ + Sbjct: 100 FHPSLFGNNQILQEKYFLPFFENTSLEFHHFYSNDEAGVK--VGRYLQEVLLLKEDSDSG 157 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ-MLGFIAENYDQALTINDVAE 215 L + L W ++ KN + + + M+ FI ++Y + +++ D+A Sbjct: 158 YELGVISCMLELWSFLIRTDLLSAAKNKSESEQELNIQKDMVSFIYQHYPEKISLTDIAA 217 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 + + IF+ MQ + ++ R+ LL T KSI +IA+ GF S F Sbjct: 218 AGHVGRSKCCQIFKHYMQQSPVDFLNTYRLKISCRLLCTTQKSITEIAILCGFNHLSYFS 277 Query: 276 STFGKYVGMSPQQYRKLSQQR 296 F + G +P++YR L + Sbjct: 278 KYFMECYGCTPREYRTLHEHE 298 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 101/295 (34%), Gaps = 13/295 (4%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M + + P + Y + P HWH + E+ G E Sbjct: 1 MKYIEYREKREHGTREFPYACYRVTENF------PRYNMIPHWHNECEIIYVRSGYFELF 54 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQS-MAIFNLPMHLFLSWPLDKDLINHVTHG 119 ++ I+ G +L + H T C+ +F++ L S L + H Sbjct: 55 LDGHTHRIDAGCCSLIIGGSMHGGTPKDNCRYDCLVFDMAALLKSSQICTLHLQPIINHE 114 Query: 120 MVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSR 179 + + P + + + E + + + + G Sbjct: 115 RRFITFFSADSEPAKDAKAVIDAMLEKEPGYEFTVPG-----RLLCMLGHIVARQEHYQS 169 Query: 180 THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 + ++ +I +NY + +T+ ++A +N NY F+ T +Y Sbjct: 170 GETAASDIKKVRRFKNVISYIEQNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEY 229 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQY-RKLS 293 + RI L++ TD+ ++DIA+ GF S F F G++P+ Y R+ Sbjct: 230 LNYFRIESACELIASTDEKLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDYCRRSF 284 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 102/265 (38%), Gaps = 11/265 (4%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 I + +M H+H E+ G + IN + + G +T+ H+ + Sbjct: 24 IRRSSSFVMKRPHYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPS 83 Query: 90 CQSM---AIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPN 146 ++ F+ ++ H+ ++ P E R +EL + Sbjct: 84 WEAERFGIYFSRDTVTSFLSLCGREAFGHIFSQP-------KRTIPSEFRPKIEELLAQM 136 Query: 147 EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 + + + L + + +R +++ + V + ++ ++Y + Sbjct: 137 QDEEKQGDSYCQIQLCSLLHQILVVLGRCQEARREGHALEEAEEAMV-RAARYMNQHYQE 195 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 +T+ VA ++ Y F+ L K+Y+ +R+ +L +TD S+ +A+ Sbjct: 196 GVTLGQVAAFANMSPTYFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMAC 255 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRK 291 GF + F F + G+SP++YRK Sbjct: 256 GFSDGNYFGDVFRRLTGVSPREYRK 280 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 112/299 (37%), Gaps = 18/299 (6%) Query: 4 DTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINN 63 ++ + P+ ++ Q ++ + ++ HWH E+ V G + I++ Sbjct: 5 KELRENTRIDEKMHPVQIF---QNRALQKKPGELILYLHWHEHFEIIVMQQGSAVFHIDS 61 Query: 64 EKVNINQGHITLFWACTPHQLTDT-GTCQSMAIFNLPMHLFLSWPLDK---DLINHVTHG 119 E + G + A H S LF +W D + G Sbjct: 62 ESYEAHPGDVLFVPAGALHVGYSLCEGDLSYLAIVYNSSLFQNWMQDSLHTKYVLPYLEG 121 Query: 120 MVIKSLATQQLSP------FEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPIL 173 V + +L P + + + E + + + ++ ++L S L Sbjct: 122 RVQLPVKPTRLDPSCADYYYLLEQANSEFKAKQPAYQLMVKSQLHMLLTLLSRKFLPHQL 181 Query: 174 VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQ 233 + + + ++ + ++ +I N+ T+ D A + LN ++ +F+++ Sbjct: 182 PEQATNQYVHN-----REQFKALIEYIEANFADKQTVADAARRMNLNVHHFCKMFKKLTG 236 Query: 234 LTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 T Y+ R+N LL D SI +IA G +S+ F + KY G++P Q RK Sbjct: 237 RTFIDYVNVCRVNEAERLLLAGDLSITEIAGCVGCDNSNYFTKMYKKYKGVAPSQLRKQ 295 >UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDM6_9FIRM Length = 298 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 58/270 (21%), Positives = 106/270 (39%), Gaps = 5/270 (1%) Query: 26 QRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT 85 +P + HWH + E + F G V Y + + +G + T H + Sbjct: 25 FPCGCYNASPEVQVPWHWHEEYECSYVFHGAVTYHTPQGEFRLGEGDGIFLNSGTLHTVE 84 Query: 86 DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 +L H L + ++ + A Q L W E+ S Sbjct: 85 VAPAGSLKKS-DLVFHGRLIYGSRDSVLYQKYVQPLSAPDAFQTLILRRTVSWHAEILSR 143 Query: 146 NEQIRQLAIDE---IGLMLKRFSLSGWEPI-LVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 ++ +L +E ++ + + ++ + + QML ++ Sbjct: 144 IKKAVRLCQNEPEGYEFTVRSLLSEIFFDLYCYRNAPAAETSAATASENARIKQMLRYLQ 203 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 ENY + +T+ ++A H + + FQ+V+ L+ QY+ RI LL ++D S+L+ Sbjct: 204 ENYTRRVTVAELAAHANICERECLRCFQKVLHLSPIQYLIRYRIARSCILLRESDLSVLE 263 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 I+ GF S S F TF + G +P QYR+ Sbjct: 264 ISNLCGFESPSYFTKTFRQITGGTPTQYRR 293 >UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides RepID=C3QPX4_9BACE Length = 325 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 107/295 (36%), Gaps = 17/295 (5%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQG 71 +K L++ + + P H+H + E+ G+ + L+ + ++ ++G Sbjct: 34 KKIMNEKLTITTSNPVRARFYEYPRFTYPWHFHSEYEIIYVEKGEGDCLVGDSIISYSKG 93 Query: 72 HITLFWACTPHQLTDTGTCQSM-------------AIFNLPMHLFLSWPLDKDLINHVTH 118 + LF + PH + + + Sbjct: 94 DLILFGSELPHSMQSPPDGGEESDNEEKSELKVRGVNIQFEKDFMHYSISQYSQFIPIRN 153 Query: 119 GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTS 178 + F + R + + + +D+I L+L + T+ Sbjct: 154 ----LLEDACRGIKFTITRSGKIIKLLKQIPSAKGVDQIILLLSLLQMMATSNHRKYLTT 209 Query: 179 RTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQ 238 + S S + +++ ++ ++Y +++ ++++A + +N F+ T K+ Sbjct: 210 SHYTPSPSIMRNERMEKVIAYLNKHYTESIGLDEIASYTAMNPTAFCRYFKENTGKTFKE 269 Query: 239 YITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 Y+ MRI + LL+ + +I I+ T GF S F F + GM+P YR+ Sbjct: 270 YVLDMRIGYACKLLNSSMMNISQISATCGFESPVHFNRIFKRVTGMTPTFYREQM 324 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 110/294 (37%), Gaps = 11/294 (3%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M+ + P+ ++ + + HWH E G + Sbjct: 1 MDKEMLKEKVMHGDDNFPIGIHKTD-----IDKGRDNILYLHWHEGFEYLTVTKGRAVFK 55 Query: 61 INNEKVNINQGHITLFWACTPHQLTD--TGTCQSMAIFNLP--MHLFLSWPLDKDLINHV 116 +++ ++ +++G + H C A+ P + +++ +++ IN + Sbjct: 56 VDDLEIEVSKGEGIFINSNVLHSAHSINEEECSFFAVVCHPAFLSSYINDCINQRFINPI 115 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNK 176 + + + ++ ++ L + I + L+LK W + N Sbjct: 116 LNHSLYFPIHLKKDVDWQRNILL--LLTQVYDINKEKEFGYELLLKSKIYEIWFECIKNA 173 Query: 177 TSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 +K S + + + +L +I ENY + +++ A V ++ + F+ + T+ Sbjct: 174 KKSINKGSNTSYKTERMKVVLNYIHENYFNKIVVSEFASLVHMSDEHFCRFFKAMTHFTL 233 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 Y+ RI LS T+K I +IA GF S F F K +G +P YR Sbjct: 234 VSYVNRYRIERSCVFLSQTNKKISEIAGDVGFGDISYFNKVFRKIMGCTPVDYR 287 >UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBD9_CLOBU Length = 302 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 66/306 (21%), Positives = 125/306 (40%), Gaps = 18/306 (5%) Query: 1 MNTDTFMCSSDEKQTRS------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFD 54 M + ++ +T S P+ +Y + + HWH ++E + Sbjct: 1 MEVNKVTVDANLLETTSHGNREFPMDVYRDDFSKYY-----TNIINWHWHPEIEFVMITK 55 Query: 55 GDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLIN 114 G +EY E + + +G + T H Q +F++ + L + + +I Sbjct: 56 GKIEYSTEEETLILREGDGIFINSNTLHMAKSIDGYQDSLMFSVVVSPKLIYNDTESIIY 115 Query: 115 HVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE---IGLMLKRFSLSGWEP 171 +++ L + WQ+++ S I L +E ++K W+ Sbjct: 116 KKYVKPIVECSKLSYLKLDKYNTWQKQILSHLLYIDALKFNEEHGFEFIIKNQISLIWQL 175 Query: 172 ILVNKTSRTHKNS----VSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGI 227 I +N + N+ +Q + QML FI +NY +TI+D+A+ ++ + Sbjct: 176 IALNTSHLYLHNNCLINSHSLSQERLKQMLRFIHKNYFNNITIDDIAKSANISRSECFRC 235 Query: 228 FQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQ 287 F++++ Y+T R+ LL +TD + DI + GF SS + F + G+SP Sbjct: 236 FKKMINTKPFSYLTDFRLEKSLQLLLETDIPVSDICYSCGFNHSSYYGKLFREKFGISPS 295 Query: 288 QYRKLS 293 YRK S Sbjct: 296 SYRKSS 301 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 105/283 (37%), Gaps = 6/283 (2%) Query: 13 KQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 K+ R + + P HWH + E+ G+ +N ++ + G Sbjct: 7 KENRQHGTFDFPIAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTLNGNELKLKTGD 66 Query: 73 ITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSL-ATQQLS 131 + A H T +F++ L ++ K + + + + VI SL T L Sbjct: 67 LAFIHAGILHGGTPIDCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNLE 126 Query: 132 PFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQF 191 V + E + + +L L L ++ S ++ Sbjct: 127 LQTVCNYLFESMAQKKLGYELVTQGSLYHLLGIILE-----HRLYSTPKEATSKNQQRIN 181 Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 +L I + Y LT+ D+++ + Y F+ + Q + Y+ RI Sbjct: 182 QFKNVLSLIEQQYPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQ 241 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 L T++SI +IAL GF S F TF KY G++P+QY K Sbjct: 242 LVSTNESITEIALNCGFNDISYFIKTFKKYKGVTPKQYLKDYH 284 >UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9M5_9FIRM Length = 315 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 99/291 (34%), Gaps = 5/291 (1%) Query: 4 DTFMCSSDEKQTRSPLSLYSEYQRMEIEF-RAPHIMPTSHWHGQVEVNVPFDGDVEYLIN 62 + ++ L F R + HWH ++E +V +G+ Y Sbjct: 9 RQIETDQNFRELNQTLDQRFPIWASSDSFFRYYNRYFRCHWHPEIEFSVITEGECIYEAG 68 Query: 63 NEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVI 122 + + +G H + F + LI VI Sbjct: 69 DRVYELKKGDGIFINQNVLHMAE-MKGKLECRFGVVRAEAFFLGGSTESLIYRKFMEPVI 127 Query: 123 KSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE---IGLMLKRFSLSGWEPILVNKTSR 179 + + + WQ+ L ++ ++ + LM+ W + Sbjct: 128 NNPEISCVPFYGDIPWQKRLMRQLAELIRIYEERPEGFELMMTSGFSLLWLEFVKALGEE 187 Query: 180 THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 + + + +I NY + +T+ D+AE + + +F+ V++ + +Y Sbjct: 188 KGNAVSINKDAERIRKGISYIQRNYTKKITLKDIAEICQSCQSECCRMFRNVVKESPIEY 247 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + RI L+ + S+ +IA GF SS F F K +G +P +Y+ Sbjct: 248 VNTYRIRRSLILIEEGTYSMTEIAQKTGFSGSSYFTEVFKKKMGCTPSKYK 298 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 4/255 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP-- 99 HWH +++ G++ + + + +G + H T F P Sbjct: 57 HWHDEIQFTYVSKGELTMQVEGREYVLKEGEALFINSGLIHVTTSISEDGQYEGFMFPEK 116 Query: 100 -MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 + F ++++ + V+ + S + + N + + Sbjct: 117 LLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRESAEDEKILSDIRNLRELFNNKENVTAFE 176 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSR-HAQFYVSQMLGFIAENYDQALTINDVAEHV 217 + + W I+ N + K Q + +M+ +I E+Y +A+T+ ++AE Sbjct: 177 YEVAVRMTAIWLQIVRNVSDTMQKMPACYLQRQERMKKMMQYIVEHYHEAITLKEIAESA 236 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 ++ F+ +++ T Y+++ R+ LL TD I DIA GF SS F Sbjct: 237 SISIEECRRCFKDIIKETPMHYLSSYRVMVGMELLRTTDLDITDIAFRVGFNDSSYFIQA 296 Query: 278 FGKYVGMSPQQYRKL 292 F K GM+P+QYR Sbjct: 297 FKKKNGMTPKQYRNH 311 >UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRP4_9SPHI Length = 290 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 105/288 (36%), Gaps = 4/288 (1%) Query: 13 KQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 K L + + F+ P+ H+H + E+ + + + G Sbjct: 2 KALFEKLVFSEQSSLLVRRFQIPYFDAPWHYHPEYELTYIVKSHGRRFVGDHVDSFQAGD 61 Query: 73 ITLFWACTPHQLTDTGTCQSMAIFN--LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL 130 + L PH + + + + + + V ++ L + Sbjct: 62 LVLLGPDLPHFWRNDDDYYQAGSVQKAVSIVVQFPATFPERGLATVPEAESVRKLLERSR 121 Query: 131 SPFEVRRWQQELNSP--NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 + + S + +Q + ++ +L + + S ++ + Sbjct: 122 YGLRFSQAMSQSVSELLEQLPQQTGLPQLLGLLTILNELATDQEAYLLASDGYQLAPGAA 181 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 + ++L F+ ++ + + I +A + F+ + T +Y+ +RI H Sbjct: 182 ETERMKRVLEFVLLHFREEIRIESIASIAGMAPAAFCRYFKNRTRKTFVEYLNELRIGHA 241 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 R LL+ TD SI ++L G+ +SS F+ F Y ++P QY+ L++ + Sbjct: 242 RKLLTTTDLSISQVSLDCGYNNSSHFHRQFKLYTSITPFQYQALAKGK 289 >UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8V9_9FIRM Length = 300 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 107/278 (38%), Gaps = 5/278 (1%) Query: 25 YQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL 84 Y R I P + HWH +E+ +G++ Y IN+ + + + + + H Sbjct: 24 YIRTGILSNYPDMKALCHWHEDIELIYVIEGEMNYRINDRDILLKEKDCLVVNSRQLHYG 83 Query: 85 TDT--GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQEL 142 C+ + I P L S + + + I + Q L Sbjct: 84 YAHLRRECRFICILFHPGLLNASPKIYQYYVAPFIENKNI--AYFHYAADSANHEQVQAL 141 Query: 143 NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV-SQMLGFIA 201 + ++ D L W + + S + ++ + +M+ +I Sbjct: 142 LNRILLLKTEEKDAYELEAISTLYLLWRILFLQHKSLLEQEPAYDYSDLTLQKKMVSYIY 201 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 E+Y LT++ +A ++ + IF+R ++ + + R+ R LL++T SI Sbjct: 202 EHYQDTLTLDAIAASGNISRSKCCIIFKRYLRQSPIDFANKYRLEVSRYLLANTRSSIAQ 261 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQT 299 IA++ GF S F F + G +P +YRK + Q + Sbjct: 262 IAVSCGFNHLSYFSKLFCREYGCTPTEYRKAAHQAQTP 299 >UniRef50_UPI0001745A92 transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745A92 Length = 297 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 101/291 (34%), Gaps = 2/291 (0%) Query: 8 CSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVN 67 + K R + L E + P+ H+H + ++ + ++ + Sbjct: 4 ANQVRKPIRETVPLSEHESFHCEEVQGPNYGAQWHFHPEHQLTLVLKSRGYRVVGDSLAP 63 Query: 68 INQGHITLFWACTPHQLTDTG--TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSL 125 + G + L + PH A+ + + ++ D L + Sbjct: 64 LTAGDLVLVGSNLPHVWHQDESAGRSRKAVHAIIIRFLDNFMGDDFLQRPELENVRQLLK 123 Query: 126 ATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSV 185 + F + + + + +L L + + S + + Sbjct: 124 RASRGLHFTGKTRNEVAERLRRLADNQGLPRVIELLSILDLLSHSKDVKSLASPQYAPEL 183 Query: 186 SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRI 245 Q + + + +I N + + ++ A H L+ F+ T+ QY+ +RI Sbjct: 184 KGSDQGRMERAIRYIHGNLLETVDRDEAAAHASLSPGAFSRFFRTRTGKTLPQYVNELRI 243 Query: 246 NHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 + L + D I D+AL GF + + F F + +GM+P+ YR+ Q+ Sbjct: 244 GRACSRLVEEDIKIADLALDCGFGNLANFNRQFQRVMGMTPKAYRREFQRN 294 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 103/278 (37%), Gaps = 6/278 (2%) Query: 21 LYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACT 80 + + F + HWH +E+ +G ++ IN + ++ QG I + Sbjct: 9 VLESEFPFRLFFNDGYSNTPHHWHEDIEIIYLVEGTLKACINRDTYDLTQGDILIIGGGE 68 Query: 81 PHQLTDTGTCQSMAIFNLPMHL---FLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRR 137 H + A+ + FLS D +I + + + L + R Sbjct: 69 IHCFFKEKKFSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSI--HLTMGNEIHALMER 126 Query: 138 WQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQML 197 E+ + + + I L + + ++ + S + + + Sbjct: 127 HINEIINEYSKAEEGYKLIIKARLYDLAGILIRYM-PKQSYSSEDLSREKERLKKMDSVF 185 Query: 198 GFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDK 257 ++ NY + + ++D+++ + + Y F+ +T Y+ RI + + D+ Sbjct: 186 QYVDTNYQERIDLDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIEEDE 245 Query: 258 SILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 +I +IA GF S F F VG +P +YR+ ++ Sbjct: 246 TIAEIAYNCGFNSIKTFNRLFKNIVGCTPMKYRRDNKN 283 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 100/266 (37%), Gaps = 3/266 (1%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG--TC 90 P + +HWH E + +G + Y +N + + +G + H C Sbjct: 32 DYPTMAAANHWHTDWEFILLLNGKMSYSVNGKSYELQEGQAIFINSEQMHYGYSADGSDC 91 Query: 91 QSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIR 150 + I P + + + I V ++ R + L + E Sbjct: 92 NFICILFPPSLISSITRIKETYILPVCEDTSNPFFILHPEITWQ-RNLIELLKNVYELCN 150 Query: 151 QLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTI 210 + ++ F+ + K S + + + + M G+I +NY + +T+ Sbjct: 151 EEKDGFELHVMSLFNTICFSLYNNIKDSISIQETADDKKLEAMHNMTGYIQKNYQKRITL 210 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 N++A + + IF+ ++ T Y+T R+ LL + S+ +IAL GF Sbjct: 211 NEIAAAGNVCRSSCCDIFKLILNKTPVSYLTEYRLEKSIELLKISSLSVTEIALQCGFTG 270 Query: 271 SSRFYSTFGKYVGMSPQQYRKLSQQR 296 SS F F K +G +P QYR+ Sbjct: 271 SSYFTEIFHKTLGCTPSQYRRKKFNN 296 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 110/298 (36%), Gaps = 8/298 (2%) Query: 1 MNTDTFMCSSDEKQTRSP--LSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVE 58 M + + ++ ++ HWH ++E+ + G + Sbjct: 1 MQCTKILTDKNNEELAVHGNYEFPCAVYFSDVSKYTAG-EIAWHWHKEIEIITIYKGTLY 59 Query: 59 YLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTH 118 I N+K + +G + H + + I + L I+ Sbjct: 60 IEIENKKFTLKKGESLFINSEEMHFMR-MDAREECRIISFVFDKVLICGEKGSKID---Q 115 Query: 119 GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTS 178 +I + ++LS E+ + I ++++ I+ Sbjct: 116 KYIIPLINCKELSALELTEEDSQKLIQGYFSYADEILGYEIVIRNVLSEILLNIVRENQE 175 Query: 179 RTHKNSVSRH-AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMK 237 K++ S + + + ML FI +NY + +++ D+A+ + A+ F R + + Sbjct: 176 LLEKSNGSNNTDRERMKYMLTFIHKNYSEDISLGDIAKEAFIGEREALRCFARTIGTSPI 235 Query: 238 QYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 +Y+ RI LL ++ + +I L AGF S S F F + +GM+P++YRK Sbjct: 236 EYLQKYRIYTAAELLRKSELPVTEICLQAGFNSPSYFSKVFCRMLGMTPREYRKNKLN 293 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 98/288 (34%), Gaps = 11/288 (3%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRA----PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVN 67 +K R P+++ +++ ++ HWH +E+ G+ + Sbjct: 2 DKTLREPMTMPDPQFPIKVHRCEFDGRGQVLFNHHWHEHLEILYFVSGEATLECGSTTFT 61 Query: 68 INQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDK---DLINHVTHGMVIKS 124 +G + + H L S LD I +T +I Sbjct: 62 AKEGDMIVINRNELHYGLSQSDHLFYYALIADFSLLQSHSLDAPEMKFITPITQNRLIFE 121 Query: 125 LATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNS 184 + E +LAI L L G+ ++ + + Sbjct: 122 NRISGADALAPMLSIIKELERQEFGYELAIKSELYRLLTLLLRGYVATVLTQDEYVERM- 180 Query: 185 VSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMR 244 + + +I E+Y + L++ ++ L+ + +F+ + T+ +Y+ R Sbjct: 181 ---KNVERFAPIFKYIEEHYREDLSVEQLSGMAGLSRFHFSRLFKEISGRTVTEYVNETR 237 Query: 245 INHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 +N LL ++ ++ +IA GF F TF KY M+P RK Sbjct: 238 LNRADYLLRESPLTVSEIAAATGFNDIYYFSRTFKKYKRMAPSALRKK 285 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 115/293 (39%), Gaps = 18/293 (6%) Query: 5 TFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNE 64 + +P S+Y IE HWH + E+ G + I+ E Sbjct: 17 ELKENKPHGTKDNPFSIY------HIENAGRSFQIPVHWHDEFEIIYVKSGLLTVSISGE 70 Query: 65 KVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM---HLFLSWPLDKDLINHVTHGMV 121 G + H + F P+ LD L+ + G + Sbjct: 71 SYIGKAGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHL 130 Query: 122 IKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG--LMLKRFSLSGWEPILVNKTSR 179 + + + + + + N++ +I ++L +F L W+ V + Sbjct: 131 MINPRVKDSAKELCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIENDT 190 Query: 180 THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 + +N V +M+ +I +N+ +++ + E L+ Y F+ +T+ QY Sbjct: 191 SGRNIVE-------KEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQY 243 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 IT +R+ + + LL DTD S+ + A+ +G+++ S F +F K G+SP +YR Sbjct: 244 ITYLRLENAKQLLQDTDLSVTETAMQSGYQNVSYFIRSFKKAYGISPLKYRNS 296 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 115/260 (44%), Gaps = 5/260 (1%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNL 98 + HWH ++EV G + ++N +N+G + H + + + + + Sbjct: 42 ISWHWHEEIEVIRVKSGSIHLYLDNSDFVLNEGDGVFINSNILHYIRAGTSEECILNSLV 101 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQ---IRQLAID 155 +S + + ++++ ++ ++ W +E ++ + + + Sbjct: 102 FNKNLISGGVQSVFEQNFV-NPIVENKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEF 160 Query: 156 EIGLMLKRFSLSGWEPILVNKTS-RTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 ++++ + W +L N +KN+ + + +L F+ +NY++ +T+ND+A Sbjct: 161 GYEILVREYLSHIWYIMLKNIQDLNLNKNNRNDLNSERIKNILSFVHKNYNKQITLNDIA 220 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 + V L+ + F+ + ++ QYI R++ +L + I I+ GF S S F Sbjct: 221 KVVNLSERECLRCFKNTLGISPIQYILKYRVSIATKMLRENKDPITIISDAVGFDSPSYF 280 Query: 275 YSTFGKYVGMSPQQYRKLSQ 294 F +++G++P QYR S+ Sbjct: 281 SKIFKRFIGITPTQYRNKSK 300 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 120/303 (39%), Gaps = 16/303 (5%) Query: 1 MNTDTFMCSSDEKQ--TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVE 58 + T D ++ + A + + HWH ++EV G ++ Sbjct: 3 LQECTVSTDQDRREVCPHGTIEFPCAGYDSVYSSHAINRI-PWHWHEELEVIFLPSGTLD 61 Query: 59 YLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNL-------PMHLFLSWPLDKD 111 + ++ +N G + + H+ + C+ ++ +F + Sbjct: 62 VRVPGKRFRMNAGDCLVINSNILHEAETSNECRLHSLVFHTDLISGSDSSVFYKKYMYPL 121 Query: 112 LINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEP 171 + + ++ + T +S + + + N + + + E L + ++P Sbjct: 122 ISSCTLDCVLFSAEDTSGVSIRQCFMMAFDALANNREGYEFTVRECLSRLCFLLCTFYKP 181 Query: 172 ILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 + + +++ ++S + +M+ I Y + L + D+A+ + + F R Sbjct: 182 EISDTSAKPDQDSF------RIKEMIHMIQSRYAEPLKLCDIAQAANIGERECLRCFHRT 235 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + ++ QY+ R++ LL +T+KSI +I+ GF S S F TF + SP++YRK Sbjct: 236 LGISPMQYLIRYRLSKGALLLINTNKSIAEISTRCGFDSPSNFSLTFKRKYQCSPREYRK 295 Query: 292 LSQ 294 ++ Sbjct: 296 NNK 298 >UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJC5_9CLOT Length = 309 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 116/286 (40%), Gaps = 12/286 (4%) Query: 17 SPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLF 76 P+ +Y+ Q IE M HWH +++ V G ++ ++ + +++G+ Sbjct: 26 FPIEMYTVTQG-NIEPSGRGYM-DLHWHEELQFTVVTSGKLKLRVDGKLYTLDEGNGIFI 83 Query: 77 WACTPHQLTDTGTCQSMAIFNLPM---HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF 133 H T+ FN P F ++++ + I + ++ + + Sbjct: 84 NRNLLHITTEISDGGRYLSFNFPDKVVSFFSGSTMEENFVLPYVGNYGIAVVEFKRTTSW 143 Query: 134 E------VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSR 187 + + + + E+ + + +E + +K + + K+ + NS R Sbjct: 144 QKEILDTLLKMELLFKRRREKRQAVGREEYQIAIKIVEIWYMMICNIEKSGKKISNSYIR 203 Query: 188 HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH 247 Q + ML +I Y + + D+A+ ++ F+ V+ + +Y+ RI Sbjct: 204 K-QERIQAMLSYIHNQYMHPMCLADIAQAGNVSVGECCRGFKEVVCKSPNEYLAEYRILR 262 Query: 248 VRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 + LL T+ S+ +++ GF S S F F K G++P+ Y+ + Sbjct: 263 SKELLRGTELSVTEVSGAVGFNSVSHFIQCFKKMTGVTPKAYKNMK 308 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 109/299 (36%), Gaps = 18/299 (6%) Query: 4 DTFMCSSDEKQTRS------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDV 57 + ++ ++ P++ Y+E + HWH + E + G + Sbjct: 42 QDVVADAEGREMVQHGSALFPIACYAENLK--------SYSVAWHWHEEFEYILAMKGPL 93 Query: 58 EYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVT 117 +N +V + + H + +++ + H L +D + Sbjct: 94 TVDVNKTRVTLQTNQGVFLNSGILHAVEQAEKGEALL-HSGVFHPRLVGGMDTIFWQKLI 152 Query: 118 HGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKT 177 M+ L V Q L E + +A++ + L++ Sbjct: 153 RPMLQPDAPAFFLLDEAVPWQAQVLACLREAWQAVAVEPFDYENRVRYYLSAALRLLSTQ 212 Query: 178 SRTHKNSVSRHAQ---FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQL 234 K VS+ Q + QML F+ E+Y + LT+ +A V L+ + + F++++ + Sbjct: 213 CVGGKTKVSQQEQIAAERMKQMLRFVEEHYAEELTVERIAASVALSESACLRSFRQMLGI 272 Query: 235 TMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 T QY+ R+ LL T +I + GF S F TF + +P++YR Sbjct: 273 TPIQYVKQFRVEKAAELLRSTRLKTGEIGMECGFADGSYFIKTFREIKHCTPKEYRAKF 331 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 113/294 (38%), Gaps = 7/294 (2%) Query: 3 TDTFMCSSDEKQ--TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 F+ + K+ + L + I + HWH +++ + G + Sbjct: 1 MKNFVIDQNLKELTEHRTVELPVACYKTTINQNINGYI-PLHWHDEIQFVLILKGIALFQ 59 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQ-SMAIFNLPMHLFLSWPLDKDLINHVTHG 119 IN EK+ +++G + H + + N+ H LS L + Sbjct: 60 INEEKIEVHEGDGLFINSGYLHMAEEKEGSDCTYICLNVSPHFVLSQELYSSYVQPYMFS 119 Query: 120 MVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSR 179 + L + + Q+ Q + + W+ ++VN Sbjct: 120 TNLPYLFLAGNQQWAKNIL--DAVKKINQLIQQKTSLYEIDITMQLTLMWKNLVVNGFQL 177 Query: 180 THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 + + + QML +I +Y + +T+ D+A+ +L+ + F+R++ T +Y Sbjct: 178 EY-DQSEMIKSHRMKQMLNWIHLHYVEKITLEDIAKAGQLSRSECCRYFKRMLNKTPLRY 236 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 + RI LL + ++ +++ GF S+S F S F + + M+P Y+K++ Sbjct: 237 VMDYRIQKSLLLLQHPESNVTEVSYQVGFNSTSYFISKFQQAMNMTPLSYKKMN 290 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 110/265 (41%), Gaps = 6/265 (2%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 + +HWH +E+ +G V I +E + + + + +F + H + Sbjct: 26 NTHIPAHWHEAMEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSKLYMFLC 85 Query: 96 FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF-EVRRWQQELNSPNEQIRQLAI 154 ++ + D +L + + + + ++ N N+ + Sbjct: 86 IHVDKKQLSVYCPDLELYHIKCRPVSLDDSKSTPYIHLCQLAHDLTRTNVENKNTSAMRS 145 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 D L++ + + + T + + + + +++ ++ E+Y + L++ +VA Sbjct: 146 DGTALLMLADLIRYFSVYSLPGT-----TTGTGQSNDILRKIISYVNEHYTEKLSLEEVA 200 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 V + Y F++ M +T +Y+ +RI+H +L +TDKSI ++ +GF + + F Sbjct: 201 NQVGFSREYFCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTIF 260 Query: 275 YSTFGKYVGMSPQQYRKLSQQRRQT 299 F + GM+P+Q R + + Sbjct: 261 NRLFKEIYGMTPRQARNSYAENTYS 285 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 104/293 (35%), Gaps = 11/293 (3%) Query: 3 TDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLIN 62 ++ P++++ + I HWH E+ G+V Y I Sbjct: 2 RSDLWENTVMTDPALPINVF--HPTFGI-----GCSLPLHWHEHFELIYVESGEVLYTIG 54 Query: 63 NEKVNINQGHITLFWACTPHQLTDTGTCQS---MAIFNLPMHLFLSWPLDKDLINHVTHG 119 + G + + H + A+ P L L P DL+ T+G Sbjct: 55 GQPFPTKPGDMLFVNSGELHSAASLNPNEPFTVYALVFNPSILGLKEPHIVDLVAPYTNG 114 Query: 120 MVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSR 179 M + + +Q Q L E ++ E+ + L W R Sbjct: 115 MSMIASRIEQTDSLYPLLKQTTLRLAGEFEQKPRGYELAVRSYCQLLFTWLSREFTVMQR 174 Query: 180 THKN-SVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQ 238 + + R ++L + + + +T+ A V ++ + +F+++ T Q Sbjct: 175 SDTEMNAFRARTNRFKELLTRLESDVAERVTVEQAASFVHMSPYHFCRMFKKITGQTFVQ 234 Query: 239 YITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 Y+ RIN LL +T S+ DIA G S + F F + G+SP+ RK Sbjct: 235 YMNLNRINRAEYLLKNTAMSVTDIAAEIGCSSINSFSKLFRQLRGVSPRDLRK 287 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 109/268 (40%), Gaps = 7/268 (2%) Query: 34 APHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSM 93 + + HWH ++E+ + G + Y I+ E ++ +G + L H + + Sbjct: 3 NSYRNLSLHWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSMV 62 Query: 94 AIFNLPMHLFLSWPLDK----DLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 + + FL + + +N V G + + + +E + Sbjct: 63 SDSLVFHLDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEE--MKECFISLLEC 120 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSR-HAQFYVSQMLGFIAENYDQAL 208 L K + + + H+ + A+ + ++L +I NY + L Sbjct: 121 FNGKQYGYELYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSNYRETL 180 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 TI +++ + + M F+R +T +YI RI A L +T++ ++DIA+ GF Sbjct: 181 TIEELSSVCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGF 240 Query: 269 RSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 R+ S F F + G++P YRK S++ Sbjct: 241 RNISYFNKVFKERFGVTPGSYRKNSREN 268 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 105/270 (38%), Gaps = 5/270 (1%) Query: 27 RMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD 86 + HWH ++++++ G VE+++ + + G H Sbjct: 28 SFSEIRKLSKGYVKLHWHDEIQISIVTKGSVEFIVGEKSYILKNGQAIFINTQRIHMAKS 87 Query: 87 TGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE-LNSP 145 G + + + L +I VI S + + W+Q+ L Sbjct: 88 VGD-EDCIYHAIMFNAKLLKMFPGSIIEQKYIDPVITSNKLNSIEIYGNNNWEQDALKYI 146 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSR---THKNSVSRHAQFYVSQMLGFIAE 202 ++ I I + G LK + +L+ + K + + +L FI + Sbjct: 147 SDIINVDIIQDKGYELKIYIDLLNFWLLLVLNDKDIFNQKMEPKPINEQRIKDVLSFIHQ 206 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 NY +T+ D+A+ V ++ F++ ++++ Y+ RIN LL ++ SILDI Sbjct: 207 NYSNKITLQDIADAVFVSKGECCRFFKKSLKMSPYDYLINYRINESMKLLKNSSLSILDI 266 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 + GF + S + F K G +P +YR Sbjct: 267 SENVGFNNVSHYIQIFKKKTGQTPLEYRNS 296 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 101/272 (37%), Gaps = 16/272 (5%) Query: 31 EFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG-T 89 T+H H E+ G+ ++ + + + + + H + Sbjct: 26 SRFGGDWNSTTHTHSCTELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQVEHTELSLNAS 85 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 + + FL D + + ++ + E + + Sbjct: 86 PLEYIVLGVASMEFLFSKADTNY-------AIFNCRENRERMVTLLHMLLAEADRSLDGC 138 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 + D + ++L W + + + + + + + +++ ++ NY + ++ Sbjct: 139 ETVCQDLLEVLL------IWLVRCTTISLQLEEAAPTENRE--CAEIKRYLDTNYREDIS 190 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++ +AE LN Y FQR ++ Y+ RI + +L +T S+ I+ GF Sbjct: 191 LDLLAELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFS 250 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFP 301 S S F F K GM+P +YR+ ++Q ++ P Sbjct: 251 SPSYFSQCFRKAEGMTPNEYRRQTRQGKRPAP 282 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 9/279 (3%) Query: 23 SEYQRMEIEFRAPHI-MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 SE +E + R + M T+H+H E + G+ ++ I + I G + L Sbjct: 16 SEPLWIEFDRRIGYHSMDTTHYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDV 75 Query: 82 HQLTDTGTCQSMAIFNLPMHLFLSWPLDKD---LINHVTHGMVIKSLATQQLSPFEVRRW 138 H+ ++ I F ++ L++ I L Q+ + Sbjct: 76 HRTSELSQPNHERIVLHYDLPFFDGLSREETELLLSPFASAHPIIKLNLQERMH--LEAL 133 Query: 139 QQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLG 198 + L ++ + M L L K+ + + + Q V+ ++ Sbjct: 134 FESLLRELQECPPGYQLHVRNMATEILLFTARHALKRKSLPSIELT---PVQQKVTDIIR 190 Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 I +++ + L ++++A+ ++ + +F+ V QYI RI LL +TD S Sbjct: 191 HINQHFREPLPLDELAKQFFISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWS 250 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 I I+ GF + S F F + G+SP+ YRKL Q ++ Sbjct: 251 ITQISERCGFENFSHFGKVFKELSGLSPRDYRKLEQNQK 289 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 111/280 (39%), Gaps = 5/280 (1%) Query: 17 SPLSLYSEYQRME--IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHIT 74 P +E+ ++ + M H H E+ G+ Y IN +G + Sbjct: 3 HPKYFIAEHSFSIQYMQRKGFTEMNAPHVHEGYELYYLLSGERTYFINQSVYTAEKGTMI 62 Query: 75 LFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE 134 + H+ + T + I H F+ L + +A Sbjct: 63 IINPHDLHRTSSTEVQEFERILINFSHDFIEPLLKCSHYRLLPFPENQNFIAFSLREQAA 122 Query: 135 VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVS 194 V E+ + ++ D + +L + + + + ++T +S Sbjct: 123 VEHMLMEMKKECKLKKEGHEDVVRALLFQLLFTIYRSLAGGGRNQT---RPLHPMDEKIS 179 Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 ++ +I ++ + +T++ +A ++ +Y +F++V +++YI +RI + L D Sbjct: 180 EIASYINCSFQETMTLDGLAGQFYISPSYLSRVFKKVTGFHLQEYIRHIRIREAKKRLRD 239 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 TD+ ILDIA GF+ S F F + VG+ P QYRK S+ Sbjct: 240 TDEKILDIAADTGFKHISHFNKVFKEIVGIPPLQYRKKSR 279 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 3/268 (1%) Query: 24 EYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ 83 E+ I P +H+HG E+ G+ Y I + +I G + L H+ Sbjct: 18 EFYYHRIHRTKP-FERNNHYHGTYEIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVHK 76 Query: 84 LTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELN 143 + G + I FL L+ GM + +L+ E Q LN Sbjct: 77 TSGHGDPEHERIVINFSDSFLGKGHP--LLASGLLGMFNQDRPLLRLTVPEQAIIMQILN 134 Query: 144 SPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAEN 203 ++IR+ + ++ + + + ++ N ++ ++ FI + Sbjct: 135 KMADEIRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITDVVKFIHVH 194 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 Y +T+ ++E ++ Y IF+ + T+ Y+ RI + LL+DTD I+DIA Sbjct: 195 YADKITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTDLKIVDIA 254 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + GF S + F TF K + M+ QYRK Sbjct: 255 ESIGFESLTHFDRTFKKIMNMTASQYRK 282 >UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQZ7_9FIRM Length = 296 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 105/282 (37%), Gaps = 9/282 (3%) Query: 17 SPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLF 76 P++ YS+ + P HWH E+ G ++Y + + + G Sbjct: 20 FPVAFYSDELADLPDRAGPV-----HWHPYFEIATAQSGVLDYQVGQTHIRLEPGDSIFV 74 Query: 77 WACTPHQLT----DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSP 132 H + + +F+ + + + I V + + + S Sbjct: 75 NQNMLHGIRQLSGAAPDPLPILVFSGTVVAPEHSAVYRKYIQPVLGCSTLPFVVFRHDSD 134 Query: 133 FEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFY 192 QQ + + + A E+ + S+ ++ + V AQ Sbjct: 135 LWQAVRQQIHRACDAMRERPACYELTVQRSLCSVLEAIFRHLDSLPPLPSSRVQLTAQIR 194 Query: 193 VSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALL 252 + +ML ++ E+Y Q +T+ D+A ++ + A FQ + + + + R+ +L Sbjct: 195 LQKMLSYLYEHYAQPVTLADIAAAAHISRSEAGRCFQAYLGCSPVEALIQYRLQRAWRML 254 Query: 253 SDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 +TD + +I+L GF S F F K G +P + RKL + Sbjct: 255 QETDMTQQEISLACGFHSVQYFRRQFRKRYGCAPGEKRKLGK 296 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 103/261 (39%), Gaps = 5/261 (1%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 HWH +VE G + Y NN + + G + H + C Sbjct: 38 GYSFGCHWHPEVEFTYILSGSMIYQANNTQHLVKAGDVIFVNQNCLHSGKASNDCS-CRY 96 Query: 96 FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPN---EQIRQL 152 F + + L + + G +I S + ++ +++ S E++ + Sbjct: 97 FAITFNPTLISGYKSSIFENKYIGEIINSDRIPFVYFEGSKKENEQIVSLLMRLEELYRE 156 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ-FYVSQMLGFIAENYDQALTIN 211 + L+++ W + + + + + + L +I +NY + LT++ Sbjct: 157 KAEGYELLIESKLFELWFYLYRDVYCKVPDELIKQTKNIMQIKAALDYIHDNYKENLTLD 216 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D++E L+ + +F++++ T Y+ + RI L +I + AL+ GF SS Sbjct: 217 DISEACNLSKSSCCRLFKKIVHGTPFNYLLSYRIQRSIPYLLSEGMNITEAALSVGFSSS 276 Query: 272 SRFYSTFGKYVGMSPQQYRKL 292 S + F KY+ +P +Y+ Sbjct: 277 SYYSEIFKKYMKCTPTEYKNN 297 >UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC61_9FIRM Length = 298 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 120/265 (45%), Gaps = 10/265 (3%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ--LTDTGTCQSMAIF 96 HWH ++E+ + DG + Y +N ++ G I L A H + D + ++I Sbjct: 38 FLWHWHPEIEITLVLDGQILYKVNQCTYHMKAGDILLGNANVLHAGFMEDMKDGKYVSIT 97 Query: 97 NLPMHLFLSWP--LDKDLINHVTHGMVIKSLATQQLSPFE--VRRWQQELNSPNEQIRQL 152 LP ++ S+ L + + H + ++ P+ + +E+ + E+ ++ Sbjct: 98 FLPKIIYGSYGSILRRKYVEPFLHNFSLPAVYIDYSQPWHEVFSEYVREIITLYEEKKEF 157 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 +I L++ W +L N S+ + + +++ ++ NY + + D Sbjct: 158 YELDITGTLQKL----WRCMLQNLPENLPYTEHSKLERNRMREIMDYLEYNYMNKIQMKD 213 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 +AE + L + +F+R M +++ ++ R+ L +D SI+++A +GF S+ Sbjct: 214 IAEEIHLCESECSRLFKRYMNVSLFTFLQEYRVERSLEFLLSSDDSIMEVAQKSGFTDSN 273 Query: 273 RFYSTFGKYVGMSPQQYRKLSQQRR 297 + F + G SPQ+YRK + ++ Sbjct: 274 YYAKIFSRVKGCSPQKYRKQNTKKE 298 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 105/284 (36%), Gaps = 9/284 (3%) Query: 15 TRSPLSLYSEYQRMEIEFRAPHIM-PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHI 73 + ++ E + + + H H +E++ +G +N E + G Sbjct: 1 MEQQMKMFQEDRNLPFSVYIAQDEKFSWHCHKHMELDYCSEGHCTIKVNGESYDCQPGDF 60 Query: 74 TLFWACTPHQLTDTGTCQSMAIFNLPMHLF---LSWPLDKDLINHVTHGMVIKSLATQQL 130 + H L C+ + + + + + S + + G + Sbjct: 61 VIIHTMEDHTLIRNSDCKLLGV-QMDLSVLDTAFSPFYESQYLVPFIRGSGKYQRRIRVP 119 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 + E+ ++ + + +K L + ++ K + +V+ Sbjct: 120 KGSLLESILSEILVEYQKKQPG----YEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDL 175 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 + ++ ++ ++ + L++ A+ ++ + +F++V+ T +Y +RI Sbjct: 176 ERIKPVIDYMEQHIETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEK 235 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 LL TD++I +IA GF S + F F K G +P YRK + Sbjct: 236 LLITTDRTITNIAFETGFGSVAYFNRVFKKETGQAPANYRKKMR 279 >UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE80_9FIRM Length = 323 Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 111/292 (38%), Gaps = 14/292 (4%) Query: 15 TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHIT 74 P+ +Y + + P+ HWH ++E +G +E+ I G Sbjct: 21 PAFPMEVYLDNLDL-----YPNRFIPWHWHKELEFVYVLEGTIEFQTGVSTYVIGSGQGG 75 Query: 75 LFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLS--- 131 L + H ++ + +L L LI + + Sbjct: 76 LVPSNMLHMVSPYHRQHGSIYCAVLADSYLLHGLSGGLIEEQYISALFRPETDFFFLDGT 135 Query: 132 ---PFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 V E+ + + + ++ +++++ L +E + + SV Sbjct: 136 SPWHAGVLACIHEMYQCDCSRPRGYLWKLQILVQQAGLILFENL---DMKQEPCPSVHDS 192 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 V L +I + Y L + D+A ++ + F+ V+ + Y+ + R+ Sbjct: 193 RYQRVRCCLEYIHKEYAGRLRLEDIARAANVSVSECCRDFKEVLSQSPVDYLISYRVRMG 252 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 +L+ +DKS+L+IAL GF SS F +TF +Y+G +P YRK + R+ Sbjct: 253 EYMLAHSDKSVLEIALAVGFSGSSHFSNTFCRYMGCTPLYYRKHLMEDREDD 304 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 112/281 (39%), Gaps = 10/281 (3%) Query: 25 YQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL 84 Y+ E + HWH ++EV +G Y I+ + N G I L H + Sbjct: 21 YRFFHNEVKNGRPDILFHWHPELEVTYVCEGTARYHIDYDFFNSQAGDIILIRPNGMHSI 80 Query: 85 TDTGTCQSMA-IFNLPMHLFLSWPLDK---DLINHVTH--GMVIKSLATQQLSPFEVRRW 138 + + F + + +D+ + + + + + +++ Sbjct: 81 HPIAKEKHITDNFQFHLDMLGLSVVDQVSLHYLQPLQNSVNKFVHCIKPHMPGYDDIKAC 140 Query: 139 QQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLG 198 ++ S ++ + ++LK + ++ + + Q++ Sbjct: 141 LFDIFSLAKEESRH----FEILLKSKLHEFIYLLYFHRYVVKKNTDDTYRKNEKIRQLID 196 Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +I +Y LTI+ +++ + + + M +F++ + +++ +R++ LL + + Sbjct: 197 YINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKACELLIHSTRP 256 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQT 299 IL+IA GF + S F F +Y ++P QYRK + +++ Sbjct: 257 ILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKKYTKPKES 297 >UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWD2_9FIRM Length = 298 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 103/298 (34%), Gaps = 14/298 (4%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRA----PHIMPTSHWHGQVEVNVPFDGD 56 M T + S ++ +E M + HWH +E+N+ +G+ Sbjct: 1 MAKRTILVDSARRELEKHG---TENFPMTVNHDDLWSFEGKNVPIHWHNDLEINLIREGE 57 Query: 57 VEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFL----SWPLDKDL 112 + + + + G L PH + G L FL +++ Sbjct: 58 AVFQVYQKSYRVRTGEGFLLNRNVPHSCSSPGNEHVRYSTILVRPDFLYGDFGSDVERKC 117 Query: 113 INHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPI 172 I + Q+ + E+ L +K + I Sbjct: 118 FQPFLQNSAIPCIYLTGFDENGKEILQK--LNQVEEAFDRKRFCYELKIKGLLCEAFAMI 175 Query: 173 LVNKTSRTHKN-SVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 L K + + +ML ++ ++ + +++ D+A+ V L+ +F+++ Sbjct: 176 LYGHRQELTKFVPANLQELERLEKMLNYLNMHFTEVISLQDLADQVHLSREVCCRLFKKM 235 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQY 289 T+ Y+ R+N +L+ S+ I GF + SRF S F K G +P +Y Sbjct: 236 TGKTITGYLEEYRVNKSFSLVQSGQYSMTQITEMVGFSNPSRFASAFRKRFGCNPGEY 293 >UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUK1_9CLOT Length = 334 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 121/307 (39%), Gaps = 10/307 (3%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIM--PTSHWHGQVEVNVPFDGDVE 58 M + + +++ ++ Y + E + HWH ++E+ + +G + Sbjct: 32 MPSKIQIITNEHQEELKEHGTYEFPVLVSDEALSRFYTSSFQWHWHTEIELTLITEGTMV 91 Query: 59 YLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTH 118 Y IN++ G + T H + ++ H L + I Sbjct: 92 YQINDQIFYPRAGQALFGNSNTMHTGR-MENGRDCRYISITFHPRLLYGYQGSRIASRYT 150 Query: 119 GMVIKSLATQQLSPFEVRRWQQELNSPNEQI---RQLAIDEIGLMLKRFSLSGWEPILVN 175 ++++ A + + W E E I L D + ++ W+ + ++ Sbjct: 151 DPLMENAALPAVCFDLSQEWHGEAVGLLEDIIRIDSLRYDTYEMDIQMDLFRFWKLLYLH 210 Query: 176 -KTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQL 234 + R ++ R Q + QML FI ENY +T++D++ H+ + + +F+ M+ Sbjct: 211 CRPDREPAHTAGRKNQERIRQMLSFIHENYQSDITLDDISRHIHICKSECCRVFKGYMKE 270 Query: 235 TMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 ++ +Y+ RI + + ++ + A+ AGF + F F K G SP+ YRK Sbjct: 271 SLFEYLLKYRIEKSIPDVLEGKLTMTETAIRAGFTDPNYFSKVFHKIKGCSPRSYRKT-- 328 Query: 295 QRRQTFP 301 R P Sbjct: 329 -RSSPLP 334 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 97/269 (36%), Gaps = 10/269 (3%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH-------QLT 85 PH+ H H + E+ + G I + N G +TL PH Sbjct: 20 HFPHLSYPLHCHEEYELVIVTAGTGREYIGHAVENYRAGDMTLIGPDIPHLHLCDSLTGK 79 Query: 86 DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 + + I LF + + + P R+ ++++ Sbjct: 80 NGSEESACEILYFSPSLFPDNMDGIAEYRAIAAVLEKSRRGVRYSDPALTRQIRKQVQRL 139 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 ++ I + +L + S ++ + R N + Q V + ++ E++ Sbjct: 140 DKGQGIGRIRWLLALLDTLARSQETSLIASGPVR---NGTALRRQETVDTVCRYLREHFR 196 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + L + +A +N + F++ T+ ++ +RI + LL +T SI IA Sbjct: 197 ENLCLQAIAREACMNPSALCRHFRQRTGKTLFAFLAGIRIENACRLLLETRLSISAIAWE 256 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 GF + S F F G +P +YRK + Sbjct: 257 TGFANLSHFNRQFKSLTGQTPGEYRKNIR 285 >UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9AXT8_ENTCA Length = 308 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 106/287 (36%), Gaps = 5/287 (1%) Query: 6 FMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEK 65 + +++ PL+ Y + EF HWH ++E+ G +E ++N Sbjct: 11 YYEAANHGTEDFPLAYYPNLVSVWREFF-----FVPHWHKEIEILCVHQGQLELVVNGFS 65 Query: 66 VNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSL 125 I I L T H + ++ + + +I+ Sbjct: 66 RKIKANTIVLIPPNTLHTAYRIAQQSCRFSCIVFSEQLITSRQSDRIQSQQIDPFLIQEG 125 Query: 126 ATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSV 185 T + + + L +Q L LK + +L T + K S Sbjct: 126 VTSYVDFPDKSQQSLTLFQLFDQCFMGKSSYRELRLKGIVIQLLSHLLEVGTDQPAKKSS 185 Query: 186 SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRI 245 R + +L +I NY + + + D+A+ V L+ F++ + + Y+ R+ Sbjct: 186 ERLQEKREKIVLSYIHSNYHEMIQLQDLADSVSLSKEQFTRFFKQSFRTSPMAYLNHYRL 245 Query: 246 NHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 LL +TD +++ IA GF +S+ F F K G +P QYRK Sbjct: 246 IRSAELLRETDLTMVAIAQAVGFCNSNHFSVCFKKMFGETPTQYRKN 292 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 202 bits (515), Expect = 9e-51, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 111/273 (40%), Gaps = 12/273 (4%) Query: 25 YQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL 84 ++ E R + + HWH VE+ + +G +++ IN+ + + + H + Sbjct: 16 FRMFIFEGRDGNYRVSKHWHQSVELFLVLEGTLDFFINSRQYTLKPNDFVIVNPNEIHSI 75 Query: 85 TDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNS 144 + +PM F + D+ I + L R +++ Sbjct: 76 ECPD-PNITIVLQIPMKSFEGYMSDESRI-TFADKDESQKARLVALVTAMYRTYEKGEFG 133 Query: 145 PNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENY 204 +++ ++ + L++ F + + + V + + +SQ+ ++ ENY Sbjct: 134 YRLKVKSQFMEFLYLIVTEFRIEQIDKVRVQQ----------KRHLDKLSQVTQYMKENY 183 Query: 205 DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIAL 264 D+ L++ VA +Y +F+ Q + Y+ +R+ + L ++D+ + DIAL Sbjct: 184 DKELSLEMVASRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYVGDIAL 243 Query: 265 TAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 GF + F F K G P QYRK Q++ Sbjct: 244 DHGFADARAFAKAFKKRYGCLPSQYRKQMNQKQ 276 >UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BDP1_9FIRM Length = 321 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 123/317 (38%), Gaps = 23/317 (7%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQ-RMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEY 59 M + ++K+ + S Q E HWH ++E+ G +EY Sbjct: 1 MKGIQILTEKNKKEVKEHGSYTFPVQVSPEAIQSYEQHSFMWHWHPEIELTWFVSGQMEY 60 Query: 60 LINNEKVNINQGHITLFWACTPH--QLTDTGTCQSMAIFNLPMHLF--LSWPLDKDLINH 115 ++N+++ I++G + H + D C +++ P ++ + L ++ Sbjct: 61 VVNDQRYIISEGEGIFCNSNALHAGYMIDDQDCNYISVTFHPKFIYGYENSILQTKYVDF 120 Query: 116 VTHGMVIKSLATQQLSPFEVRRWQQE-----------------LNSPNEQIRQLAIDEIG 158 +T SL + P++ + + Q + + Sbjct: 121 ITSNEFWSSLVLKPEIPWQNEIIEYIKEIYTLTCQVQSSSDAFIPGYEGIAEQPELPDYE 180 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 + W + ++ + + +L ++ E+ + L++ D+A H Sbjct: 181 FRIHLLLCEIWHRLYLHYVQIAQDTPHPQKHLQRLKDILSYLQEHASEELSLEDIAAHAG 240 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 L + F++ M++T+ Y+ + RI + LL D + +I IA GF S + + F Sbjct: 241 LCKSECCRFFKKYMRMTIFDYLLSTRIQNSIPLLMDGE-NITTIAGLVGFSSPAYYGQIF 299 Query: 279 GKYVGMSPQQYRKLSQQ 295 +Y+GMSP QY+K + Q Sbjct: 300 KRYIGMSPSQYKKNAAQ 316 >UniRef50_B0MHX9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MHX9_9FIRM Length = 306 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 107/301 (35%), Gaps = 7/301 (2%) Query: 1 MNTDT-FMCSSDEKQTRSP---LSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGD 56 MN ++ K+ P +E + HWH ++E+ G Sbjct: 1 MNHVHGIQYKNNSKEELFPDFGPDFPYTCSYVEFDRCIGG-QIPWHWHKEIELFYIEKGT 59 Query: 57 VEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHV 116 +EY K+ +G + + H + + L L++ Sbjct: 60 LEYDTPGGKIVFPEGSGGMVNSNILHSTKSLDPKKDTIQLDHIFDSSLISGQHGSLLDQK 119 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE--IGLMLKRFSLSGWEPILV 174 S + LS + ++ L L+ E ++L+ W +L Sbjct: 120 YILPFTGSPQAEILSFYPRTPKEKRLLKLLRDSFFLSPHEFGYEILLRSALSKLWCLMLS 179 Query: 175 NKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQL 234 + + + M+ +I ++Y + LT+ +A ++ IF++ + + Sbjct: 180 LSRPLLGQKKPQSGSDQKIKSMMEYIQDHYSEKLTVPRIALAAYISERECFRIFRQSLGI 239 Query: 235 TMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 T +Y+ RI +LSD S+ I + G SSS F TF + +G +P++YR Q Sbjct: 240 TPSEYVKNFRIRQACIMLSDPSLSVSYIGQSCGLGSSSYFGKTFREVMGCTPREYRCKWQ 299 Query: 295 Q 295 Sbjct: 300 N 300 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 86/266 (32%), Gaps = 13/266 (4%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG- 88 I + ++M H+H E+ G I+ + + G + H+ Sbjct: 26 IRRSSSYVMKRPHYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRALYEEG 85 Query: 89 ---TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 M F + + + + + + E Sbjct: 86 LQAERYDMYFTKEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHE---- 141 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 D + ++ L ++ + ++ + + +I Y Sbjct: 142 -----NGQEDAYSHVQQQSLLFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYR 196 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 + LT++ +A ++ Y F+ K+Y+ +R+ LL +TD ++ IA+ Sbjct: 197 EHLTLDAMAAMSNMSPTYFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIA 256 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRK 291 GF + F F K G+SP++YR Sbjct: 257 CGFSDGNYFGDVFKKLTGLSPREYRN 282 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 94/303 (31%), Gaps = 14/303 (4%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M + + Y HWH + E V G V Sbjct: 1 MEAVHLLEHRQHGDATFHIQAYHVVLTPGPH----QQTVNLHWHSEAEFIVVTRGSVCLQ 56 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTG-TCQSMAIFNLPMHLFLSWPLD---KDLINHV 116 + +++ + G + L H + G + L D + ++ + Sbjct: 57 VGSQRHVLADGGVALLSGGELHSMASPGKGPSECKAIVFGLDLLEGPSGDRVQQSYLSPL 116 Query: 117 THGMVIKS---LATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPIL 173 G + + P R + + EQ + G + + +L Sbjct: 117 ASGKLRLPGAIAHDHPVRPHLAARLCEIAEALEEQPVGYELAVKGCLYDVLAQLFRAKLL 176 Query: 174 VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQ 233 V + R + + +L +I E+ L + D+A ++ + F+ + Sbjct: 177 VEDSPR---REMDDRRADTLKAVLTYIDEHLSDKLRLADLARVANMSEGHFCRFFKEMTH 233 Query: 234 LTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 QY+ R+ LL D ++SI I + GF S F F Y +P YRK Sbjct: 234 RKPMQYVNERRVARAADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKAL 293 Query: 294 QQR 296 ++ Sbjct: 294 LRK 296 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 106/276 (38%), Gaps = 1/276 (0%) Query: 27 RMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVE-YLINNEKVNINQGHITLFWACTPHQLT 85 ++ + HWH +E++ G ++ I+ QG I L + H + Sbjct: 17 KIIFHTSDDAQLVPRHWHESIEISYVLSGKIDDIYIDGIHYTSEQGDIVLINSNAIHSFS 76 Query: 86 DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 A+ + FL + ++ + E+R + Sbjct: 77 VVQGKNRKAVTFFISYEFLKTNYPDIDQIAFDCVSIDQNDEHKIKIFNELRENLDSIIRA 136 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 +R ++ I ++ + L + ++ ++ ++++ +I ENY Sbjct: 137 FSNLRDDSLAHIKVIGLSYELIYLLLKNFKISKKSFGEIKTKKYLDRLTEITNYIKENYS 196 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 Q L+I+ ++ L+ Y F++ M +T+ YI +R+ L +TD+SI +IAL Sbjct: 197 QDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLMNTDQSITEIALE 256 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFP 301 GF + F F + ++P QYRK + + Sbjct: 257 HGFPNEKSFNKVFKTFYNITPNQYRKKIKALKSVIK 292 >UniRef50_C7PB15 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PB15_CHIPD Length = 291 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 113/285 (39%), Gaps = 12/285 (4%) Query: 18 PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFW 77 + +++ Q IE P+ H+H + E+ + + + ++ + + + G + Sbjct: 7 KVGAFADNQITIIERCDPYFNTPFHFHPECELVFVMESNGKRIVGDSIESFDVGDMVFLG 66 Query: 78 ACTPHQLTDTGTCQ--------SMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQ 129 PH + + + P +F +T + ++ + Sbjct: 67 PHIPHVWYNDESYHKNNDQLKARSVVIYFPKDIFGEKFYGLPETKSLT-DLFHRAQRGMK 125 Query: 130 LSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHA 189 + ++++ S ++ ++ I +L + + S + ++ + Sbjct: 126 ILGPTYDMLKEQILSL---PKKEGLERIISLLNILKILAETKDVQYLASTGYSHAFNAKD 182 Query: 190 QFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVR 249 + ++ ++ N+ + +++ DVA L+ F+ + + Q++ +RI H Sbjct: 183 NHKIDEVFKYVMGNFSKEISLQDVASITNLSPQSFCRFFKNRTKKSFVQFLNEVRIGHAC 242 Query: 250 ALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 L++ D SI +IA + GF++ S F F + VG +P++Y+ + Sbjct: 243 KRLTEEDWSIAEIAYSCGFKNLSNFNRFFKEIVGKTPKEYKNELR 287 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 97/298 (32%), Gaps = 6/298 (2%) Query: 4 DTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHI-MPTSHWHGQVEVNVPFDGDVEYLIN 62 + + + + + + + A HWH ++E+ +G + Y +N Sbjct: 3 REIITDKNMLELNPHGNYGFPFYLIYVTLSAYQFGRFNCHWHPELEIACILEGTMTYQVN 62 Query: 63 NEKVNINQGHITLFWACTPHQ--LTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 + +G + H + + C+ + P ++ D D Sbjct: 63 QNLYQLGKGDCLFVNSNALHSGCMFENNDCKYIVATFNPSLIYGYEKSDIDTNYTFPLLN 122 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 + + Q++ L +K W + Sbjct: 123 TDNFTSFVFRDGADGNETFQKIMKEMAAFYTEENACYELHIKSRLCELWALLFEEFQRSQ 182 Query: 181 HKNSV---SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMK 237 + + + FI +Y +T++ +AE + + IF++ + T Sbjct: 183 LPSGAGLAEAKQISRLKNAIIFIHSSYTDPITLDQMAESCHTSKSEFCRIFKKTLHQTPF 242 Query: 238 QYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 +Y+ RI LL SI +IA GF SS + F KY+G SP++Y+K Sbjct: 243 EYLLRYRIQKSLPLLVTDTCSITEIASQVGFSGSSYYSEVFRKYMGCSPREYKKNLMN 300 >UniRef50_UPI0001745884 transcriptional regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745884 Length = 295 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 97/271 (35%), Gaps = 6/271 (2%) Query: 24 EYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ 83 E H+H ++E+ + ++ + N++ G + L + PH Sbjct: 25 EDPIFCEHLAGSSYGTPWHFHPELELVLVKKSQGYRIVGDNITNLSAGDLVLVGSNLPHL 84 Query: 84 LTDTG--TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE 141 + + V ++ K+ ++ R Sbjct: 85 WHQDNTAGELEAVVVQFVADFLGREFAGRSDFEPV-RQLMDKARRGLHITGDVRDRVADR 143 Query: 142 LNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 +++ + E+ +L + S P + +S + Q V +++ FI Sbjct: 144 MSAMVGLGPLRRLAELLSILDDLAHS---PGVAFLSSPGFAPQLGLGDQARVDRVMQFIH 200 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 ++ + + + VA L+ F+ T Y+ +R+ LLS TD ++D Sbjct: 201 KHLCEPINRDQVAAIAALSPGAFSRFFRSRTGRTFPAYLNELRLGRAARLLSTTDLRVVD 260 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 +A GFR+ + F F K+ G++P ++RK Sbjct: 261 VAADCGFRNLAHFNRLFLKWKGVTPSEFRKR 291 >UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 Tax=Clostridiales RepID=C4ZF37_EUBR3 Length = 291 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 107/295 (36%), Gaps = 13/295 (4%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 + + + + P + Y ++ HWH +E+ G Sbjct: 4 LEYENYHEDKTHVELTFPYNTYLCSIPLDFSG------VPLHWHDDMELIYIKKGCGHIS 57 Query: 61 INNEKVNINQGHITLFWACTPHQL-TDTGTCQSMAIFNLPMHLFLSWPLD---KDLINHV 116 ++ ++ ++ + L H + + + L D +D + + Sbjct: 58 VDFKEYHVTAPSLVLILPGQLHSIDQYMDESMEYENIIFSLSMLLPGKYDYTKEDFLTPL 117 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNK 176 G + P+ +++ +E + + L +K + +L N+ Sbjct: 118 LAGRFTVPTVFTPVYPY-YEDVVAPIDACDEICKTMPQG-YQLYIKSKLYEFFF-VLDNR 174 Query: 177 TSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 K S+ + +L ++ NY ++I D+A+ + ++ M F+ M + Sbjct: 175 CRNLTKPLKSKKTLDKMKVVLKYVENNYADKISIADIADVAGFSESHFMRYFKETMGTSF 234 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 Y+ R+ LL +D S+L I+ GF S S F F K+ GM+P QYRK Sbjct: 235 VDYLKDYRLTMAARLLQSSDSSVLSISGEVGFESLSYFNRAFKKHYGMTPLQYRK 289 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 112/288 (38%), Gaps = 15/288 (5%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRAPH--IMPTSHWHGQVEVNVPFDGDVEYLINNEKVNIN 69 E + P + HWH + E+ G + I+ E Sbjct: 4 ELKENKPHG-TKDDPFSTYHIENAGQSFQIPVHWHDEFEIIYVKSGFLTVNISGENYIGK 62 Query: 70 QGHITLFWACTPHQLTDTGTCQSMAIFNLPM---HLFLSWPLDKDLINHVTHGMVIKSLA 126 G + H + F P+ + LD L+ + G ++ S + Sbjct: 63 PGDAFVVSPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMISPS 122 Query: 127 TQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG--LMLKRFSLSGWEPILVNKTSRTHKNS 184 + + + + + +I ++L +F L WE + + + + +N Sbjct: 123 VKDTIKELCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGRNI 182 Query: 185 VSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMR 244 V +M+ +I +N+ +++ + E L+ Y F+ +T+ QY+ +R Sbjct: 183 VE-------KEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLR 235 Query: 245 INHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 + + + LL DTD S+ + A+ +G+++ S F +F K G+SP +YRK Sbjct: 236 LEYAKQLLQDTDISVTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKK 283 >UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG17_9FIRM Length = 317 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 115/280 (41%), Gaps = 10/280 (3%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 Y Y R + + SHWH VE+ G ++Y +N E + + + + + Sbjct: 20 YPVYIRSAFLSQYHNYTAVSHWHEDVEIIYVLSGTMQYDVNGENITLYENEGIVVNSRNF 79 Query: 82 HQLTDT--GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ 139 H C + P L + + + + T I L + ++WQ Sbjct: 80 HFGYSDKKEECGFICFIIHPSVLSGNPYIRERYVRPFTECQAIPFLHLRPD-----KKWQ 134 Query: 140 QELNSPNEQIRQLAID--EIGLMLKRFSLSGWEPILVNKTSR-THKNSVSRHAQFYVSQM 196 EL + L D E L+ + + + N + K+ + + + +M Sbjct: 135 NELLEVLWTVFHLNQDAPEFYLLCQEAVFRIFTLLYTNNMELLSEKSEKADISLIQLRKM 194 Query: 197 LGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTD 256 +G+I ++Y ++ ++D+A+ ++ IF++ M + Y+ R+ LL++T Sbjct: 195 VGYIQKHYQDSIMLDDIAKIGEMGKTACCNIFKKYMNTSPIDYVITYRLAQSTVLLTETR 254 Query: 257 KSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 I +IA +GF ++S + +F K G +P Q RK ++ Sbjct: 255 LPITEIAYGSGFHNASYYTKSFRKQYGKTPGQMRKEYLKQ 294 >UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B6C Length = 303 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 96/264 (36%), Gaps = 5/264 (1%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG--TC 90 R P HWH +E G++ Y IN + + + + + H + C Sbjct: 38 RYPDRKALCHWHDDLEFIRIVHGEMNYYINGKNLVLKEHDGIMVNTRQMHYGSSINQNDC 97 Query: 91 QSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIR 150 + I P + + + + + + + P + + Q++ Sbjct: 98 SFLCILVHPALFSSNRLIYQKYLLPLLEDRETEFVYLDSGRPD--HGFILDCLMEMTQLK 155 Query: 151 QLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ-MLGFIAENYDQALT 209 + L + W + + V + M+ FI ++Y + LT Sbjct: 156 EHGEYGYELEIIGLFYLIWRHLARQFKAGKTAAPGIEDMDTKVQKDMVSFIYQHYTEKLT 215 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++ +A + + IF++ + + ++ + R+ LL TDKSI +IA GF Sbjct: 216 LSAIAASGGVCRSKCCQIFKKYLCQSPIDFLNSYRLEVSSHLLKKTDKSITEIATECGFN 275 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLS 293 S + F ++ G +P+Q+R Sbjct: 276 HLSYYSELFMRHYGCTPRQFRSQH 299 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 92/280 (32%), Gaps = 8/280 (2%) Query: 23 SEYQRMEIEFRAPHIMPTS-HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 ++ P HWH +E+ G+ + I +E V G + Sbjct: 16 QDFPFDVFHIIPPGKEVLHLHWHDDLELIYFIRGNATFYIGSETVKPEPGDLMFVNKGMI 75 Query: 82 HQLTDTGT-CQSMAIFNLPMHLFLSWPLDKDLI---NHVTHGMVIKSLATQQLSPF--EV 135 H L S + N G + + + Sbjct: 76 HTGFADDEHQVEYYALVFHSVLAESRVAGSSHVQITNPYASGKRFFPILLPVTDAYNSLI 135 Query: 136 RRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ 195 +++ + EQ I ML + ++ + ++V + Sbjct: 136 AGIVKQMIAEYEQQAIGYQVAIQSMLHLLLVHLSRHHHLHGPT-GSADTVGAELTDRFKE 194 Query: 196 MLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT 255 ++ F+ +Y + LT+ A V L+ + F++V T +Y+ +RIN LL + Sbjct: 195 LIAFVERHYPEKLTVQQAAGIVNLSEYHFCRTFKKVTGKTFVEYVNLLRINAAEQLLIHS 254 Query: 256 DKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 I +IA GF S + F F +Y SP Q RK + Sbjct: 255 SDPITEIAFKVGFGSVNYFSQMFRQYKRHSPSQCRKRYAR 294 >UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C6D193_PAESJ Length = 833 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 97/263 (36%), Gaps = 8/263 (3%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNL 98 HWH ++E+ G V ++ + + + I + + H+L T + Sbjct: 26 IRFHWHKEIELIYVLQGAVTVYVDQRQYRLAEDDIIAINSMSVHKLECTNLDNVLLTLQF 85 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 L + + + +RR + + + + Sbjct: 86 GPELLDDEGT-------LFDCNSMSQTEYNRYRYDRLRRCLARMVWESNKKGPGHRN-YS 137 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 + + + T+ + + +++++ ++ ++Y++ +T+ +A+ Sbjct: 138 MGSLQTLIGHLTRYFTAGTNGGPREKGKDYDYMRLNRIIQYVDKHYNEKITLQTIADQEH 197 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 L+ +Y F + + ++Y+T +R+ A LSDTDKS+ IAL GF + F F Sbjct: 198 LSLHYFSHFFSDKIGIPFQKYLTLIRLEKAAAQLSDTDKSMTQIALDCGFANVKLFNQYF 257 Query: 279 GKYVGMSPQQYRKLSQQRRQTFP 301 G +P YR + P Sbjct: 258 KGKYGSTPGSYRDALANAKTVDP 280 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 9/274 (3%) Query: 31 EFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL--TDTG 88 F + H E+ G + I I I + PH+ Sbjct: 32 RFHDTSWHMEPNKHECFEMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHKFIVKSES 91 Query: 89 TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQ 148 C+ + + ++ F D L N + + T +V + + N Sbjct: 92 GCEFIVLSFKFVNRFDGQYSDVSLENFL---DFVSGKETGPFITLKVSQKNDIIVLLNRI 148 Query: 149 IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQML----GFIAENY 204 +++ +IG + L +L+++ + + ++ + +++ +I NY Sbjct: 149 LKERENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNY 208 Query: 205 DQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIAL 264 ++ +++ D+A +V L+ +Y F+ M ++ Y+ +R+ + LL DTD I DIAL Sbjct: 209 ERDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIAL 268 Query: 265 TAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 + GF + RF F KYV ++P QYRK Q ++ Sbjct: 269 SVGFSNQQRFNDIFKKYVKLTPLQYRKNVQVKKH 302 >UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ATK5_9FLAO Length = 288 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 98/290 (33%), Gaps = 12/290 (4%) Query: 13 KQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 KQ L + E APH P H+H + ++ + +G + ++ + G Sbjct: 2 KQAIRKLPISKSKSFAIHELIAPHFDPHWHFHNEYQLVIVLEGTGTRFVGDDISHFEAGD 61 Query: 73 ITLFWACTPHQLTDTGTC-------QSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSL 125 + L + PH + T + + + +N + + L Sbjct: 62 MVLTGSNLPHVWRNDETYFQGLSLVTHCIVIYFSLDFMEG-----EFLNKEEMKGIRELL 116 Query: 126 ATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSV 185 + + + +L + L L + L + N+V Sbjct: 117 DRSHRGLEISGEIRDTVKKIMCDMLRLKGFDGVLSLLQILNILSSQKLKFINKEGYLNTV 176 Query: 186 SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRI 245 + + + +I +N+ + + +VA L+ F+ T ++ +RI Sbjct: 177 TDSDSKRMRTIHSYILDNFKGDIRLEEVASLANLSPTSFSRYFKSHTNKTFSNFVAELRI 236 Query: 246 NHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 LL D SIL IA G+ + S F F + SP +YRK Q+ Sbjct: 237 GAACKLLHSNDLSILGIAHECGYNTLSNFNKKFKELTNDSPLRYRKRYQK 286 >UniRef50_C6JDN8 Putative uncharacterized protein (Fragment) n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDN8_9FIRM Length = 301 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 111/305 (36%), Gaps = 14/305 (4%) Query: 1 MNTDTFMCSSDEKQTRS------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFD 54 M + ++ P+++ + E ++ HWH +E+++P + Sbjct: 1 MAMRKILVDETNRELCEHGTVGFPMTV-NHDDLWAFEGKS----VPIHWHNDLEISLPRE 55 Query: 55 GDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLIN 114 G+ Y + + + G + L PH + L F+ D+ Sbjct: 56 GEAIYQVYRKSYTVRPGDVLLLNRNVPHSCHSPNNSHARYSTFLTRPDFICGEYGSDVER 115 Query: 115 HVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE--QIRQLAIDEIGLMLKRFSLSGWEPI 172 + S L E + + NE + L +K + I Sbjct: 116 RCFRPFLQNSAVPCILLTSESSCTRTVIQKLNETEALFDQKTFCYELKIKGLLCEIFGMI 175 Query: 173 LVNKTSRTHKNSVSRH-AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 L + K + + QML ++ ++ +++ ++A+ V L+ +F+++ Sbjct: 176 LCEHQNDLAKFIPANQLELERLEQMLDYLNTHFGSVISLQELADQVHLSREVCCRLFKKM 235 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 T+ Y+ R+N L+ S++ IA GF ++SRF F + G +P +Y Sbjct: 236 TGKTITGYLEEYRVNQSLPLVQSCQYSMIQIADMTGFSNASRFARAFRRQFGCNPGEYNS 295 Query: 292 LSQQR 296 L Q+ Sbjct: 296 LKLQK 300 >UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W740_DYAFD Length = 288 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 100/290 (34%), Gaps = 14/290 (4%) Query: 10 SDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNIN 69 + + PL E + H+H + E+ V + + N + Sbjct: 2 KAQFEAFQPLP---ESSFRIFGYEVKEFDAPWHYHPEYELTVILQSEGIRYVGNSMESFE 58 Query: 70 QGHITLFWACTPHQLTDTGT---CQSMAIFNLPMHLFLSWPLDKDLINHV--THGMVIKS 124 G + L PH +T S + P S L+ + + + + Sbjct: 59 AGDLVLLGPNLPHCWKNTPDSVGPASSIVVQWPAEFMGSGWLNVEEFKSIRRLLQLATQG 118 Query: 125 LATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNS 184 + Q V + R + EI +L + + + Sbjct: 119 VRFNQEVSARVLPMLAAMLDMQPFPRLMKFLEILELL------ATVKSIHLLCEQGFTHP 172 Query: 185 VSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMR 244 ++ ++ + +I E+Y + +T+ +A V ++ F R MQ + ++ R Sbjct: 173 LNYEDNQRINTVYNYIREHYAERITLATLAGLVHMSEESFSRFFSRTMQKPLFTFLNEYR 232 Query: 245 INHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 IN +L +TD + +I+ G+ S F+ F K+ G++P YR + Sbjct: 233 INMASKMLIETDMQVAEISFACGYESPPFFFRQFRKFGGITPAAYRNQFR 282 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 109/274 (39%), Gaps = 6/274 (2%) Query: 25 YQRMEIEFRAP---HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 + R + M ++H+H Q E+ G+ Y I + ++ G + L Sbjct: 12 DRSFHFSAREVFGHYTMLSNHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDV 71 Query: 82 HQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE 141 H+ TD T + + ++ + L + + G+ + + E + + Sbjct: 72 HRTTDADTQDHVRVL---LNFSKDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVL 128 Query: 142 LNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 L+ +I + + +++R + +SQ++ +I Sbjct: 129 LDKMIHEIEHQSTGFQVALQALLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYIN 188 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 NY LT++ VA++ ++ Y F++ T +YI +RI + LL +T+ ++D Sbjct: 189 TNYQTPLTLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVID 248 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 I+ GF S S F F + SP YR+L+ + Sbjct: 249 ISEAVGFGSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=C7G9X0_9FIRM Length = 303 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 119/307 (38%), Gaps = 18/307 (5%) Query: 1 MNTDTFMCSSDEKQTRS------PLSLYSEY-QRMEIEFRAPHIMPTSHWHGQVEVNVPF 53 M T ++T P + Y + + + HWH ++E Sbjct: 6 METFKITTDETLRETIQHGNNRYPFAYYPDNIWKFDFHRID------WHWHHELEFLYTA 59 Query: 54 DGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL--FLSWPLDKD 111 +G LI K+ +++G + H+ + + I P L S +K Sbjct: 60 EGTALCLIGTSKIELHKGCGIFINSGVLHRFEAQSSTFAPNIVFSPTLLAPENSLIYEKY 119 Query: 112 LINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEP 171 ++ ++ + + + +V + ++ + E + I L+ + +++ Sbjct: 120 ILPVISSSVPYQVFSPSNTFGKQVLQLLSQICTIQETKPDNELCTIQLLFQLWNILQKNM 179 Query: 172 ILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRV 231 + ++ H+ + H Q + M+ +I ++Y + +T+ +A ++ + A+ IFQ Sbjct: 180 DWTSDSNSIHRLN---HKQARLQAMMQYIHDHYMEEITLETIAASASISKSGALHIFQTG 236 Query: 232 MQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + + Y+ R+ L T KS+ IA GF SS F F +Y MSP +YRK Sbjct: 237 IHCSPVAYLIQYRLAQAAEQLYITQKSVSSIAEETGFTSSGYFCRKFRQYYHMSPNEYRK 296 Query: 292 LSQQRRQ 298 + Sbjct: 297 RKTEEIS 303 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 98/276 (35%), Gaps = 8/276 (2%) Query: 18 PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFW 77 P+ Y++ + HWH ++E+ G +N E + + G + + Sbjct: 13 PIETYTDNCEIFHSLYN-------HWHDEMELIYIESGSGLVRLNKEILRVKAGDLIIVN 65 Query: 78 ACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRR 137 H + + FLS P V ++ + Sbjct: 66 RGVLHGIKTDLKNILYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHIISRSDDN 125 Query: 138 WQQELNSPNEQIRQLAIDEIGLMLKR-FSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQM 196 + + + +K + ++ T + + + ++ Sbjct: 126 YGNICLLFDRIHSCHKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKDENKSLASIKKI 185 Query: 197 LGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTD 256 L +I NY Q LT ++ + Y M +F++ T+ YI +RI + +L +D Sbjct: 186 LDYINLNYSQPLTAAELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSD 245 Query: 257 KSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 S+ +IAL GF ++S F F + GMSP ++R+ Sbjct: 246 SSVTEIALEVGFNNTSYFIKKFQQATGMSPHKFRRN 281 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 116/288 (40%), Gaps = 12/288 (4%) Query: 10 SDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNIN 69 + + +P + +S+Y +++ HWH ++E+ G + I+ E + Sbjct: 6 KENRPHGTPENPFSQYHISDVKRA---FQIPVHWHDELEIIYVKQGKLHVTISGENYIGS 62 Query: 70 QGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFL---SWPLDKDLINHVTHGMVIKSLA 126 + + H + F P+ ++K +++ + G ++ S Sbjct: 63 PKDAFVVSPGSLHLMGSPTGDADYYTFLFPLEYISFQTDDLMEKSILSPLKRGRLMISPQ 122 Query: 127 TQQ---LSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKN 183 + ++++ N + A E K + + N + Sbjct: 123 INDTAADICERLIEINEQISGKNAEKTDAANIEAQFETKITLIKFIRKMWRNGLILENGT 182 Query: 184 SVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAM 243 + + + +M+ +I +NY + +++ + L+ Y F+ +T+ QY+ + Sbjct: 183 NGTNTTE---KEMITYIRQNYTREISLKEFGAQFHLSEKYISRYFKEHFHITLSQYVNHL 239 Query: 244 RINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 R+ H R LL ++ S+ ++A+ +G+++ S F +F K G+SP +YR Sbjct: 240 RLEHARQLLEESTASVTEVAMCSGYQNVSYFIRSFKKMYGVSPLKYRN 287 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 105/272 (38%), Gaps = 2/272 (0%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 Y + ++ + HWH E+ +P + ++ +++G I + Sbjct: 14 YRKDMQIRLHNNDVCENYPPHWHTPFELIMPTESGYSVHCGEKEYVLDEGDIIIICPGVI 73 Query: 82 HQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE 141 H+L + I L + +I+ ++ ++I Q+ R + Sbjct: 74 HELFSPPKG--VRIIFLVSLAQIDLQELDLVISMISPAILISPEKFPQIHAQIHRLMLEI 131 Query: 142 LNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 + + L+ L G + + + KN+ + + +I Sbjct: 132 RDEYFRNLPYTESSIYAKFLEILVLVGRCYAEIAQHNFEAKNNKQQEYMEKFLFICNYIN 191 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 E+Y + L++ +VA + + +F++ T +Y+ RI H + LL D + S+LD Sbjct: 192 EHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLLVDKNLSVLD 251 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 I+L GF + S F F K G +P + RK+ Sbjct: 252 ISLQCGFSNLSSFLRMFRKLTGFTPTELRKMY 283 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 91/285 (31%), Gaps = 10/285 (3%) Query: 15 TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHIT 74 + + + ++ H H E+ G + + G + Sbjct: 7 PYELPEVENHSFFFIDQQVEVNLEAKLHQHDAWELYYVVHGQGNRMAGDTLQPFTAGDVV 66 Query: 75 LFWACTPHQLT----DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL 130 L H+ T + + L + ++ Sbjct: 67 LIPPSMIHRWEYNADSTDEEGHVRYLMVAFSHSLLERCIEVFPELRNRLSGVQFPTDALK 126 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 E R + + S ++ +L L + + K Sbjct: 127 FGLESSRIIRRILSEINEMDELE------RLSAMFRLLPVIFTSSDYTLAGKPMRIERDV 180 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 + Q+ ++ ++Y ++ ++D+AE V +N + F+R +T Q++T R+N Sbjct: 181 RRMQQICAYVMKHYVHSIALDDIAEEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACH 240 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 LL +T + + +I GF F F +GMSP +YRK + Sbjct: 241 LLKNTQRGVAEICYMVGFNDLPHFVRVFTNTMGMSPTKYRKQYKN 285 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 97/255 (38%), Gaps = 12/255 (4%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP-- 99 H H E+ G+ I++ +G + + + H+ T G I Sbjct: 28 HVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRTTYNGKGMHERIVISFRN 87 Query: 100 --MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 + + + N + G+V + + + E +SP+E Sbjct: 88 EATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALLDKLIFENDSPDELSP------- 140 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 +K + I+ K + + ++ +I E+Y L++ VA+ Sbjct: 141 -AFIKVGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKF 199 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 L+ +Y F+ K+YI +RI + LL +T+KSI DIA GF S+ F Sbjct: 200 NLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDA 259 Query: 278 FGKYVGMSPQQYRKL 292 F K G+SP +YRK Sbjct: 260 FRKAKGISPHKYRKN 274 >UniRef50_Q2S9E7 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S9E7_HAHCH Length = 284 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 9/286 (3%) Query: 7 MCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKV 66 M + P E E P M T+H H +E+ + G VE L + + Sbjct: 1 MIGQSYGRESHPYGFELE-----GERHQPEAMATAHQHCHLEILILTRGKVEMLYGQQTM 55 Query: 67 NINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLA 126 ++ G + + A HQ F LP+ + L + + HG ++ Sbjct: 56 ILSAGELLCYSALHFHQFGAVSDDAVAYSFRLPLFALFNLQLSCGVKQQLFHGAPCRARC 115 Query: 127 TQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVS 186 + + RW EL + + L +DEI L+L+R ++ + Sbjct: 116 AGLVDDTMLARWVAELRLRDPALDDLILDEITLLLRRL----FKDACFTPPDQQIPGVSG 171 Query: 187 RHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRIN 246 ++ ML FI +NY ++++ DVA+HV L+ N+AM +F++ + +++ +Y+TA+R++ Sbjct: 172 LKVSQHIPVMLQFINDNYHASISVCDVADHVGLHKNFAMTLFKKTLGMSILEYLTALRVH 231 Query: 247 HVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 H R +L T + + IA +GF S +RFY F KY G SPQ+YRK Sbjct: 232 HARRMLQYTGEQVTQIAYASGFSSVTRFYEVFAKYFGESPQKYRKS 277 >UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostridiales RepID=C4ZFS6_EUBR3 Length = 293 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 104/281 (37%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQG 71 +K+ ++ Q+ A + + T+HWH + E+ + G Y I+ + +G Sbjct: 11 QKENAKHGEVFFPVQKYITRLAADYPVITTHWHDEAELTLITKGSCTYQIDLLEYEAKEG 70 Query: 72 HITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLS 131 I H ++ + + + FL + ++ A L Sbjct: 71 DIIFIPPLLLHSISIRDCDEFYSETYVFHINFLGGNNTDICSSRYLTPLINHEFAMPYLI 130 Query: 132 PFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQF 191 + + + E L + L+ + S + + + Sbjct: 131 APKHPAYSSLCKCFMRITNLYSRQEFAYELALKAFLLQAIFLLLQYSEKNADFGVNTSSD 190 Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 + +L +I +Y +++ + ++A + + M F++ M +T QYI +R+ Sbjct: 191 KLKNVLDYIDVHYAESIQVAELAGLCYFSEYHFMRFFKKHMNMTCVQYINNVRLEKSVEQ 250 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 + SILD++L+ GF + S F+ F K M+P + K Sbjct: 251 FERGNTSILDVSLSVGFHNLSYFHRAFKKRYHMTPLSFIKS 291 >UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QN46_9SPHI Length = 288 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 107/278 (38%), Gaps = 5/278 (1%) Query: 22 YSEYQRMEIEFR-APHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACT 80 + + I+ AP+ H+H ++++ + G+ ++ ++ N + L A Sbjct: 10 TVDDRSFRIDQDNAPYFYGQLHFHPEIQLTLIQQGEGTLIVGDKIDRFNPYDVLLLGANL 69 Query: 81 PHQLTDTGT---CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRR 137 PH L +S LF L+K ++N + L Q Sbjct: 70 PHVLRSDTDYYQPESTRRATSVSVLFKPEHLEKTMLNLPETRHLTTLLQEAQHGVRLRCG 129 Query: 138 WQQELNSPNEQIRQLA-IDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQM 196 + L E I + +++ +L+ P ++ + Q + Q+ Sbjct: 130 TENALTQLLEDIPEKRPFEQLLGLLQVLDNLAANPEREVLSATAYAQPQRPDDQRRLEQV 189 Query: 197 LGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTD 256 +I + Y ++++DVA L F++ + T Q + +RI H L ++ Sbjct: 190 FSYILQRYASPISLDDVANVANLTPGAFCRFFRQHTRKTFSQLLNEVRIEHACRYLRESQ 249 Query: 257 KSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 ++I IAL G+ + S F F + VGM P +Y + + Sbjct: 250 ENISQIALNCGYTNLSNFNRQFKEIVGMPPGEYIRSYR 287 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 107/280 (38%), Gaps = 11/280 (3%) Query: 28 MEIEFRAPHIM--PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT 85 + I P P H H E+ G ++ +++ ++ + QG L HQ+ Sbjct: 88 ILINAHIPFFNRSPQPHKHDFFELVYVVRGSMKNVVDGRRILLEQGDFCLMNPNAVHQVE 147 Query: 86 DTGTCQSMAIFNLPMHLF----LSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE 141 G F + LF LS L+ +L + + Q F R ++ Sbjct: 148 TDGKDPLAINFLMKKELFNKAFLSIVLENELFANFFVDSIYHKKNKQNYLVFSARHLEEP 207 Query: 142 LNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTS----RTHKNSVSRHAQFYVSQML 197 + S + L +R S + V T S+ +S+++ Sbjct: 208 IISQYLLQIFREYENDQLYSQRVIESAMSCLFVEFTRSYKRELEFESLQDLPGGNISKII 267 Query: 198 GFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDK 257 +++ENY A T+ A+ + Y + ++ + + + + R+ H LL T+ Sbjct: 268 SYLSENYRTA-TLQTTAKQFNYHPKYLPNLLKKYLGQSFSEIVQQFRLAHACELLKQTEL 326 Query: 258 SILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 I D+A +G+ + + FY F + GMSP YR +Q R Sbjct: 327 PISDVAQESGYTNRTYFYKVFQQKFGMSPNDYRHQNQAPR 366 >UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFB6_9CLOT Length = 323 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 117/325 (36%), Gaps = 38/325 (11%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M + + P++LY HWH ++E GD Sbjct: 6 MANTLLKENRTHGTVQYPVALYEWN-------GENEWHVVPHWHEEMEWIYFQKGDFPVW 58 Query: 61 INNEKVNINQGHITLFWACTPHQ-LTDTGTCQSMAIFNLPMHLFLSWP-LDKDLINHVTH 118 IN ++ ++ H + + +S +F + + F + + ++ + Sbjct: 59 INTKEYQVHAPAFMCIHPEELHALILEKDGIESAVVFPVDILCFERYDAAEAKVLGPLAE 118 Query: 119 GMVIKSLATQQLSP--FEVRRWQQELNSPNEQIRQL------------------------ 152 G + + Q E+ +E+ Q+++ Sbjct: 119 GKLRMPVLCQSGDAAFEELSACYKEIEQVLRQMKEHDTKKVQHLDSSITRENVAGEPKQN 178 Query: 153 ---AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 + + + K L T + ++ + ++L +I E+Y + Sbjct: 179 LQKNMLYLNIKAKMLELIAVAYKYDLFTRQVREDREESGTVENLKKVLQYIGEHYGSPIR 238 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++++AE V +N Y F++ + T+ +YI +R+ L++T+ I+DIA GF Sbjct: 239 LSELAELVNMNEQYFCRYFKKNIGKTITEYINVIRVEKAATALAETEDKIIDIASACGFD 298 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQ 294 + F F K GM+P +YRK S+ Sbjct: 299 NIGYFIRRFKKEKGMTPSEYRKKSK 323 >UniRef50_UPI0001BC838F helix-turn-helix- domain containing protein AraC type n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC838F Length = 289 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 108/271 (39%), Gaps = 3/271 (1%) Query: 21 LYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACT 80 L E + + H+H E+N+ + + +I + + + L Sbjct: 11 LTDEDLFVLLNNPKAKFDYPIHFHSDYELNLVMNTSGKRIIGDSIEDFENCDLVLLGPGL 70 Query: 81 PHQLTDTG-TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ 139 PH+ + ++ S+ L+K + + ++I+S + R + Sbjct: 71 PHKWKAPTLDETQVITIQFHEQMYNSFLLNKRVFEPIRE-LLIRSTRGIVYTGKTFERVK 129 Query: 140 QELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGF 199 + L + + E +L S++ E L+ S V + ++ + Sbjct: 130 ERLLNLSNARGFNTALEFYSILYDLSIAD-EQRLLTSASYDSSLLVRESRSRRIEKICKY 188 Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 I N+ + +T+ ++AE V ++ + F++ + Y+T +RI + LL++T +S+ Sbjct: 189 IEVNFKKDITLKEIAELVNMSESAISHFFKKRTNRSFITYLTDVRIGYASRLLAETTQSV 248 Query: 260 LDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 DIA GF + S F F KY +P YR Sbjct: 249 ADIAFECGFSNLSNFNRIFKKYKNQTPTDYR 279 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 101/296 (34%), Gaps = 10/296 (3%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M+ + + + S + + + P+ H+H ++E+ G+ + Sbjct: 1 MDMLKLKPAFEAIEPDFGQSFTYQ----KFDALKPNKNLVWHYHPEIELVYVNGGNGKRQ 56 Query: 61 INNEKVNINQGHITLFWACTPHQLTDT--GTCQSMAIFNLPMHLFLSWPLDKDLINHVTH 118 I + QG + L + PH S ++ + S Sbjct: 57 IGSHVSYYTQGDLILIGSNLPHCGFTDACTGNTSESVVQMKTDFLGSDFFSI----PEMR 112 Query: 119 GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTS 178 + + F ++ + + +L + G + Sbjct: 113 NIRQLFEKAKGGIAFTGSAKKKIGEKIEILEYKSDFQRLLAILNILNELGSTSEYQILNA 172 Query: 179 RTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQ 238 ++ + F+ ENY + +++ ++A+ + F++V T Q Sbjct: 173 EHLSVETQSKENERINSIFNFVKENYREPISLEEMADLTHMTVPSFCRYFKKVTNKTFVQ 232 Query: 239 YITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 ++ R+ H LLS+ + SI +I +GF + S F +F + GMSP +YR + Sbjct: 233 FVNEYRMVHASNLLSENEMSITEICFESGFNNFSHFNKSFKAFTGMSPSEYRNQLK 288 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 104/262 (39%), Gaps = 7/262 (2%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 H H +E+ G +Y I + ++++G I + HQ T F Sbjct: 29 EARYHSHDFIEMAFILSGHGKYKIADRLYDVSEGDIIILNPGQKHQALCTDPSNPATEFF 88 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF--EVRRWQQELNSPNEQIRQLAID 155 + + ++ + + + E+R+ ++ + + Sbjct: 89 VGLCDVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAMSVENDVCRS 148 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSV----SRHAQFYVSQMLGFIAENYDQALTIN 211 +MLK + + +L ++ N+ S ++ V Q++ + ++Y + ++++ Sbjct: 149 GRYIMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFEDHYSEKISLD 208 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT-DKSILDIALTAGFRS 270 +AE++ L+ Y IF+ T +++ +R+ + LL + D SI ++A G+ Sbjct: 209 QIAENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQEVAAKVGYDD 268 Query: 271 SSRFYSTFGKYVGMSPQQYRKL 292 F F K GM P + R+L Sbjct: 269 VYHFSKLFKKRFGMPPSKIRRL 290 >UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEF5_ALKOO Length = 854 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 103/257 (40%), Gaps = 3/257 (1%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH VE+ + G+V + + K + + + L + +T + + Sbjct: 29 HWHSAVEILLVLQGNVSLGVGDHKYLLKENDLILINYNEIYSITRGKEDNLLLSLQIDPV 88 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLML 161 + D + V Q VR + ++ + + I + Sbjct: 89 TLSQY--DPNFSRLVFDCKSFMYCKDNQEKFDVVRYYMAKVVWEYSKKKPGYQLRIASNI 146 Query: 162 KRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNA 221 + + ++ K+ + + ++L +I EN D+ +++ +A++ ++ Sbjct: 147 HLLAAHLVNNLTNENLNQL-KSEIKDKDLARLKRILSYINENIDKKISLKTIAKNEHISY 205 Query: 222 NYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKY 281 Y + + +T ++YI +R++ LL ++K+I +++ +GF + F F + Sbjct: 206 FYLSRFIKDNLGVTFQEYINTLRLDKAVNLLLSSNKTITEVSYESGFANIKLFNKLFKET 265 Query: 282 VGMSPQQYRKLSQQRRQ 298 G SP QY+K+ ++ + Sbjct: 266 FGASPLQYKKIHKESSE 282 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 115/298 (38%), Gaps = 11/298 (3%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M F T+ P + Y + P +HWH + E+ G Sbjct: 1 MKYIEFKEDMVHGSTKFPFAYY------YVNSYHPRYHMITHWHKEYEIIRILSGTFNIK 54 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 I+ + G I + H +F++ L + ++ +L + + Sbjct: 55 IDAVSYTVKTGDILFLNSGAIHSGIPVDCTYECLVFDISSLLQQNSLVNTELNALIHYKK 114 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 I+ L ++L V ++ + + I L F E L K Sbjct: 115 KIQLLFDKKLGA--VYDILNQMFEIMKDKKNGYQLRIYGNLYYFLGLVEEKNLYIK--EK 170 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 +++++ + + ++L FI Y + +++ D+A+ +K+N Y F+ + + T +Y+ Sbjct: 171 EFSAINKKSLSRIKKVLFFIETKYMENISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYL 230 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYV-GMSPQQYRKLSQQRR 297 RI + D SI D+A GF +S F F KY GM+P++Y KL ++ Sbjct: 231 NHYRIECACEKIKFFDSSITDVAYDCGFNDTSYFTKVFKKYNSGMTPREYSKLYLKKE 288 >UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X9W6_OXAFO Length = 293 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 106/258 (41%), Gaps = 11/258 (4%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM 100 HWH ++ +G++E +E++ + GH H + +G C F P Sbjct: 43 MHWHEDLQFIYVLEGEIEVRTLDEELKLAAGHGVFINKNVVHSVNQSGDC-HYKSFIFPD 101 Query: 101 HL--FLSWPLDKDLINHVTHGMVIKSLATQQLS--PFEVRRWQQELNSPNEQIRQLAIDE 156 + F + L++ + M + V ++L+ + + + E Sbjct: 102 YFLRFYFGSPAEHLVDSLVENMDVPLCRFIPGIGWCDTVLSILRKLSFLEKNGNEFYVYE 161 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 + + L L + K + + + L +I ++Y +A++++D+A Sbjct: 162 VLVFLTSLWLE------IRKNVSLPSGKKEKPVSRRMQRFLAYIEKHYAEAISLDDLAGS 215 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 ++ + + F+ MQ T +Y+ R++ LL +TDK + +IA GF +S F Sbjct: 216 GNVSKSECLRCFRVSMQTTPYKYLVEYRLSKAAILLQETDKPVGEIASCTGFHQASYFGK 275 Query: 277 TFGKYVGMSPQQYRKLSQ 294 F + G SP+ YR +Q Sbjct: 276 CFREKTGFSPRDYRGKNQ 293 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 109/276 (39%), Gaps = 4/276 (1%) Query: 21 LYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACT 80 + S+ + + H+H E+N+ + E ++ + + + + Sbjct: 11 ISSDDLFIVLNHPNAKFDYPVHYHSDYEINLVMNTYGERIVGDSVEKFDNLDLVMTGPNL 70 Query: 81 PHQLT-DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ 139 PH + + L L+K L + + +++ S S + + Sbjct: 71 PHAWKGEIVEGNHVVTIQFSDKLLNFPILEKRLFSPIKQ-LLLDSQKGISFSENTMLAMK 129 Query: 140 QELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGF 199 +++ + E +L S + ++ N K+++ ++++ + Sbjct: 130 EKILQLTRMQGFHTVLEFLSILYDLSTADRHILVSNLYDT--KDTIRTSKSRRIAKVCDY 187 Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 I +N+++ + + DVA V ++ + F++ T YI +R+ +L++T ++ Sbjct: 188 IEKNFEEPIKLGDVAALVNMSESAFSHFFRKKTNCTFIDYINNLRVARACQMLTETSHTV 247 Query: 260 LDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 +I + GF + S F F K G +P +YR + QQ Sbjct: 248 AEICYSCGFNNLSNFIRIFKKKKGNTPSEYRTILQQ 283 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 111/291 (38%), Gaps = 14/291 (4%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRAPH--IMPTSHWHGQVEVNVPFDGDVEYLINNEKVNIN 69 E + P EY E R HWH ++E+ G + I+ +K Sbjct: 4 ELKENHPHG-TREYPFCEYHMRYFPHAFQIPVHWHDEMEIIYVRKGPLTVEIDGQKFTGE 62 Query: 70 QGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSW----PLDKDLINHVTHGMVIKSL 125 G + + H ++ T F P+ D+ H + Sbjct: 63 DGSVFIASPGVLHMMSAPDTPVDYFTFIFPLEFISFQTKDALEDEVFFPLRNHTRGFRPE 122 Query: 126 ATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSV 185 + ++ EL N ++ ++ + L + E + + +R + Sbjct: 123 VADRKLLGKLIPILDELVEENGKMGTHRQIQVRIRLLQMMDLLVEYSQLEELTRNASGEL 182 Query: 186 SRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRI 245 ++L +I +NY + + +++EH L+ Y +F +T+ QY+ +R+ Sbjct: 183 E-------KEILLYIQDNYHDNIGLAELSEHFHLSEKYMSRLFSERFHMTLTQYVNYVRL 235 Query: 246 NHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 + R LL TD S+ +IA+ +G+++ S F F +G SP +YR +R Sbjct: 236 RYARHLLESTDLSVTEIAMKSGYQNVSYFIRRFSSAMGESPLRYRNGKARR 286 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 96/292 (32%), Gaps = 21/292 (7%) Query: 14 QTRSPLSLY---SEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQ 70 T P L + + P + H H E+ G + + + Sbjct: 3 DTAIPYELPEAENHSFFFIDQRTEPSLEAKLHRHDAWELYYVVHGQGNRMAGDTLQHFEA 62 Query: 71 GHITLFWACTPHQLT------DTGTCQSMAIFNLPMHLFL-SWPLDKDLINHVTHGMVIK 123 G + L H+ D C + L S + +L N + M Sbjct: 63 GDVALIPPSMLHRWEYAADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPT 122 Query: 124 S-LATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHK 182 L S +R+ E+N +E R L + K Sbjct: 123 DALKFGPESVRVIRKTLSEMNGMDELGR----------LSAMFRLLPVIFTSSDHIFAGK 172 Query: 183 NSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITA 242 + Q+ ++ ++Y ++ ++D+A V +N + F+R +T Q++T Sbjct: 173 PMRIEKNVRRMQQICAYVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQ 232 Query: 243 MRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 R+N LL + K + +I GF F F +GM P +YRK + Sbjct: 233 YRLNTACDLLKHSQKGVSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRKQFK 284 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 112/284 (39%), Gaps = 13/284 (4%) Query: 14 QTRSPLSLYSEYQRME-------IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKV 66 +T+ P L +E R++ P + HWH E++ G+ E+ +N Sbjct: 2 ETKQPPRLTNEDYRLQPRAPVQVFHGIHPGTI-PLHWHEFYELSYVVGGEGEHRLNGSAY 60 Query: 67 NINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLA 126 ++ G + L H+L + F +D +L + + G ++ Sbjct: 61 PLSSGTLFLLTPADFHELVSVEDKPLEIYNVI----FTEAMMDDNLYHWLFGGKLVLHAQ 116 Query: 127 TQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVS 186 +++ ++ + + R+ + I L+R + N + + + Sbjct: 117 LEEMQHRQIFADYERMREETGASREGSEIAIRATLQRLLVDLNRGSTAN-CALPTNGTGN 175 Query: 187 RHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRIN 246 R + + L +I ++ + L + D A + +A Y F + + + ++Y+ +R+ Sbjct: 176 RQLNVNLQRALIYIHHHFREDLRLEDAAAQAQYSATYFSECFSKSVGQSFQRYLQNVRMQ 235 Query: 247 HVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +LL + + +I +GF + F F + GMSP+QYR Sbjct: 236 FAESLLRVSSLPVTEICYASGFNTLGHFERVFRQRKGMSPRQYR 279 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 95/272 (34%), Gaps = 2/272 (0%) Query: 23 SEYQRMEIEFRAPHI-MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 ++ ++ R P+ M +H H E+ G + +N+ N+++G + L Sbjct: 4 NQDLKITRIKRDPYFSMKDAHLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGAL 63 Query: 82 HQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE 141 H+ T I FL + V + Q + Sbjct: 64 HRTTYISGGSHERICITFSKSFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISK 123 Query: 142 LNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 + ++ + L ++K S + + +I Sbjct: 124 AHREMMYQDTYSLYLASSHVYELILFILRLNSISKQDDITPYDAS-PDDQIMEKAAKYIC 182 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 NY +T+ + A + ++ Y F+ V K+Y+ ++RI LL T I + Sbjct: 183 SNYQSPVTLEETAAYCNMSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITE 242 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 IAL +GF S+ F F + G+SP +YRK Sbjct: 243 IALLSGFNDSNYFGDVFKRMKGISPCKYRKNK 274 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 94/259 (36%), Gaps = 15/259 (5%) Query: 37 IMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ-LTDTGTCQSMAI 95 H H E+ G + I +++ + + + L PH + Sbjct: 32 WHSMEHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQPWEYIA 91 Query: 96 FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID 155 + F + V + P+ + +E+ + E + + + Sbjct: 92 LGIEGVQFQYSEKEAPY-----SYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQTICQN 146 Query: 156 EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 + L+L + S + L ++ + + +I E+Y + +T++ ++ Sbjct: 147 LLELILLSVARSTRQEFL---------SAPRQKTTRECRLVEQYINEHYHEDITLDTLSA 197 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 V +N Y + F+ ++ Y+ R+ R LL T+ S+ I +GF S S F Sbjct: 198 LVHINKYYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFS 257 Query: 276 STFGKYVGMSPQQYRKLSQ 294 TF + G +P YRK + Sbjct: 258 QTFRRLTGTTPNAYRKKKK 276 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 98/272 (36%), Gaps = 16/272 (5%) Query: 31 EFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG-T 89 T H H E+ G+ ++L++ + + + + H + Sbjct: 57 SRFGGDWNSTVHTHSCTELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQVEHTELSLNAS 116 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 + + L D + ++ + E + + Sbjct: 117 PLEYIVLGVSGIEILFGKADSTY-------AIFNCRENRERMVTLLHMLLAEADRSLDGC 169 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 + D + ++L W + + ++ S + + ++ ++ NY + ++ Sbjct: 170 ETVCQDLLEVLL------IWLVRCTTLSLQVEESPRSDNRECV--EIKRYLDNNYREEIS 221 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++ +AE +N Y FQ+ ++ Y+ RI + +L +T S+ I+ GF Sbjct: 222 LDTLAEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFS 281 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFP 301 S S F F K G++P +YR+ +Q ++ P Sbjct: 282 SPSYFSQCFRKAEGLTPNEYRRQVRQGQRPAP 313 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 100/259 (38%), Gaps = 14/259 (5%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT-CQSMAIF 96 M SH+H E+ DG+ +++ ++ ++ G + LF H+ + Sbjct: 39 MMKSHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKRIVL 98 Query: 97 NLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE 156 S L L +GM AT+Q + ++ +P++ + Sbjct: 99 YFESSEVASKELLDALDE--NNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYRRTL 156 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 + + L + + +Q++ +I +Y + +T+ +A+ Sbjct: 157 LNMFLFTMLMHTRR-----------REPEQMEETGRTTQIVSYIHSHYQEDITLEQLAQK 205 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 ++ Y F+R T+ QY+ R+ + + L +TDK+I +I+ GF + + F Sbjct: 206 FYVSQFYLCREFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNR 265 Query: 277 TFGKYVGMSPQQYRKLSQQ 295 F G +P YRK Q Sbjct: 266 VFKSVTGTTPSGYRKHHQN 284 >UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGR3_9CLOT Length = 345 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 93/269 (34%), Gaps = 7/269 (2%) Query: 34 APHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSM 93 P H H E+ G E + + +G I L HQ+ + Sbjct: 78 QPPKQYVWHNHDYFEIIYVHSGSCFNRFQGETIKLCKGDILLLNPTILHQIYALHEEDHI 137 Query: 94 AIFNLPMHLFLSWPLD----KDLINHVTHGMVIKSLATQQLSPFEV--RRWQQELNSPNE 147 L LF +IN+ + T+ F +E + Sbjct: 138 FNIMLSKSLFEGSMWQLLSGNKIINNFFVNYFYQMNKTKDYVHFRCSQNHLIEETITSLI 197 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 +++ + + + + + + + ++ FIA+NY Q+ Sbjct: 198 AEYLGKKPAYYQVIQSYLIILFAYLSRIYSEQHFIEQQDLEKIGILPDIISFIAQNY-QS 256 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 +T+ ++ ++ Y + + T + + ++NH + LL T+ +I DIA G Sbjct: 257 VTLTEIQNVFNYSSGYTSRLIKHHTGKTFSEIVHDFKLNHAKELLVSTNLNITDIAEKIG 316 Query: 268 FRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 F S F K G++P QYR+ ++ Sbjct: 317 FNDSHYLNKVFKKRFGITPTQYRRGMKKE 345 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 60/311 (19%), Positives = 126/311 (40%), Gaps = 19/311 (6%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M + P + Y E + +++ HWH Q+E+ G+ + Sbjct: 1 MKKNQLKEIKKHGTAYFPCAFYYT------ESDSENLIVKHHWHDQLELIHMKKGEFQVE 54 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTC-QSMAIFNLPMHLF-LSWPLDKDLINHVTH 118 I+ +K +++ I + H + C +S +F+L M F + + LI + + Sbjct: 55 IDMDKHVVHEETICFINSEELHFIKSNHPCKESAIVFDLKMLSFDMFDSIQGSLIQPLLN 114 Query: 119 GMV--IKSLATQQLSPFEVRRWQQELNSPNEQIRQLAID---------EIGLMLKRFSLS 167 G + + + E+ + E+ + Q++ + + +K L Sbjct: 115 GELKMPHFIFKKDKHGEEILKEYSEILEAYKISGQISQNPEGNITEKLSSQIKIKASLLK 174 Query: 168 GWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGI 227 + N N + Y+ + +I NY + + I D+++ + +N Y Sbjct: 175 ILAILYENNLLIKENNKNKDYRVEYIKTAISYIQNNYSEKIHIKDLSKQINMNEQYFCRF 234 Query: 228 FQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQ 287 F+R++ T +Y+ RI + LL +T++ ++DI L GF + F F K+ G++P Sbjct: 235 FKRMIGKTPMEYVNEYRIKKAKELLRETNRQVMDICLECGFHNMGNFIKVFKKHTGINPM 294 Query: 288 QYRKLSQQRRQ 298 +YRK ++ Sbjct: 295 KYRKNFINKKS 305 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 5/261 (1%) Query: 32 FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ 91 M SHWH E + G + IN+ + G I H+ T + Sbjct: 10 RSYEFHMAESHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPV 69 Query: 92 SMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQ 151 + + F LD + ++ P R +EL E + Sbjct: 70 NERVTI----SFDGEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIE-YEE 124 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 D ++K+ L + + + +I ++Y +T+ Sbjct: 125 TGQDGFSPLMKKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLE 184 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 +VAE ++ Y F+ V K+Y+T +RI LL + S+ +IA GF Sbjct: 185 EVAELSHMSPAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDG 244 Query: 272 SRFYSTFGKYVGMSPQQYRKL 292 + F F K G+SP+ +RK+ Sbjct: 245 NYFGDAFRKAKGVSPRAFRKM 265 >UniRef50_Q1QUA4 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUA4_CHRSD Length = 303 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 93/271 (34%), Gaps = 4/271 (1%) Query: 23 SEYQRMEIEFR---APHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWAC 79 S+ + + P + ++H + E+++ + Y + + G++ L Sbjct: 20 SQDPKFSFYWHCHDFPAPIARWNYHPEYELHLIRYSEGNYFVGDYIGRFGPGNLVLVGPN 79 Query: 80 TPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVR-RW 138 PH I + L + ++ + +L + Sbjct: 80 VPHAWLSDPDDSRSVIKGRDVVLQFKGEWLEHMMALCPELNCLSTLIEDSRQGVAFQGEE 139 Query: 139 QQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLG 198 + + L + + +SR + + + V +L Sbjct: 140 ATRCGELLITMGEQDHAGRLLTMLTILRGLSQCDYATLSSREYGLEATGVSSAQVDAILR 199 Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +I +++ + L ++ +A ++ + F+ T ++ +RI H LL + +S Sbjct: 200 YIHDHFHEELRMSALAARNGMSPSSFSRFFKHATGDTFVAFLRRIRIGHACQLLLEGRQS 259 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQY 289 I DI G+ + S F F + GM+P+QY Sbjct: 260 IADICFQVGYNNLSNFNRHFRELKGMTPRQY 290 >UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales RepID=A6LH31_PARD8 Length = 293 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 101/288 (35%), Gaps = 4/288 (1%) Query: 13 KQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 K L + PH + H+H +E+ G + + +G Sbjct: 2 KPLFQELPFPIDSHIHFYVEDLPHFIVPWHYHPAIEIMYITSGTGTRFVGDHVEGYFEGD 61 Query: 73 ITLFWACTPHQLTDTG---TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQ 129 + + PH+ + S F + +LI + + + + Sbjct: 62 VCMIGPQLPHEWRNDPVYFDKSSGLRATCICLFFKRQIFEPNLIRLPEMNNIRELIERSR 121 Query: 130 LSPFEVRRWQQELNSPNEQI-RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 V + ++++ Q + + ++ L S +V+ Sbjct: 122 RGIKFVGKSRKKIAELISQSANETGASRVIKLIALLELMATSEEYEILASTGFTETVNSD 181 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 +++ ++ +N+ + + +VA V L F++ + T +Y+ MRI H Sbjct: 182 DFERFNKVYKYLVKNFTSPVKLEEVAALVGLTPTAFCRYFKKRTKKTFVEYLNDMRIGHA 241 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 + LL + + I I+ AGF + S F F K M P +Y+K ++R Sbjct: 242 KKLLIEGNLKISTISSEAGFNNLSNFIGQFKKTTNMLPSEYQKKYKER 289 >UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KTC0_CLOPH Length = 298 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 11/277 (3%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 I + MPT H+H + EV +G+ Y I ++ + +G + H+ GT Sbjct: 18 IIRDYEYNMPTKHFHDEYEVYYLLEGERYYFIEHQTYLVKKGSLVFVNRGQIHKTGLAGT 77 Query: 90 CQSMAIFNL----PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 I P F S+ D L + + + L + RR ++ L S Sbjct: 78 SYHDRILIELKEEPFASFFSFFGDLSLKDFFSKHYGVLELEEKDQ-----RRIERLLTSI 132 Query: 146 NEQIRQLAID-EIGLMLKRFSLSGWEPILVNKTSR-THKNSVSRHAQFYVSQMLGFIAEN 203 + +I+ +I EI +M+K L + T+ + + V ++ +I N Sbjct: 133 STEIQNKSIGFEISVMMKLAKLLIFSMRCKADTNTFIPATTATTAKHRKVDEVASYIVNN 192 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 ++++ +++H ++ Y IF+ V T+ +YI R+ + LL ++ +I +I+ Sbjct: 193 CTNPISLDALSKHFFVSKCYLSRIFKEVTGFTVNEYINIHRVQKAQYLLLYSESNISEIS 252 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 GF S + F F KY SP +YRK +++ Q Sbjct: 253 AQLGFESITYFERVFKKYTESSPLKYRKQNRKEIQPI 289 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 98/268 (36%), Gaps = 2/268 (0%) Query: 34 APHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSM 93 HWH ++E+ + G Y I+ + + G I L H + Sbjct: 43 NGRPDILFHWHPELEIQYVYGGTARYHIDYDYFDSQAGDIFLIRPNGLHSIHPVDNQPHH 102 Query: 94 AIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLA 153 L L L + + +Q + + + + + + Sbjct: 103 TDTLHFHLDMLGQSLVDPLSLRYLQPLQNSNFKFKQCLRPSDEGYTEIKDLLFKIFKMIR 162 Query: 154 IDE--IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 E L+LK + + + + +++ +I ++Y + LTI Sbjct: 163 QKERHYELLLKSKLEELIYLLYFYRLVERKTSDDHYRKNEKIREIIDYINQHYAENLTIE 222 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 ++E + + + M IF++ + ++I R+N L ++ K +L+IA T GF + Sbjct: 223 KLSELMGYSKTHFMTIFKQHTGTSCTEFIIQARLNAACEELRNSVKPVLEIATTVGFNNL 282 Query: 272 SRFYSTFGKYVGMSPQQYRKLSQQRRQT 299 S F F Y +P QYRK +++T Sbjct: 283 SNFNRQFKHYYDQTPSQYRKTHSNKKKT 310 >UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIS8_9CLOT Length = 285 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 109/270 (40%), Gaps = 10/270 (3%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 I A MP H H + E+ +G Y I+ ++ G + HQ + G Sbjct: 18 IRREAAFTMPCKHLHNEYEIYYLLEGQRYYFIDRRTYHVTGGSLVFIDRNQIHQTSQAGP 77 Query: 90 CQSMAIF----NLPMHLFLSWPLDKDLINHVTHGMVIKSLAT--QQLSPFEVRRWQQELN 143 I P FL++ + L I +L Q L+ + + +EL+ Sbjct: 78 GSHERILISLDQNPFSDFLAFTGEMSLEGFFRRNSGILNLDKEGQNLAEYLLDGAAKELH 137 Query: 144 SPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAEN 203 R + + ++ + + + + ++ V ++ +I ++ Sbjct: 138 EKKPGFRHITMSKLSQLF----ILAQRHMSGPSSLSADLPLSTQPKHRKVDEVASYIIDH 193 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 YD+AL++ +A H +N Y IF+ T+ +YI +RI R LLS+T SI +++ Sbjct: 194 YDKALSLEIIAAHFYVNKCYLSRIFKEASGFTVNEYINMIRIRRARELLSNTSMSITEVS 253 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 + G+ + + F F +Y SP YRK Sbjct: 254 ESVGYETITYFERVFHQYTQTSPSGYRKQY 283 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 100/285 (35%), Gaps = 11/285 (3%) Query: 10 SDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNIN 69 +K+ P+ + H H E G + + + Sbjct: 7 KLQKEPYYPVV------KFYYYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEGSYQLK 60 Query: 70 QGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQ 129 +G I A T H+L + +FN+ + ++ +Q Sbjct: 61 KGQIIFLDAGTRHRLIVSE---RCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQ 117 Query: 130 LSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHA 189 S + I L +D+ L+ Sbjct: 118 ASQLLLHDTDDTYQCLRRLI--LEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQ 175 Query: 190 QFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVR 249 Q YV + L +I +NYD+ +++ D+A V L+ Y +F+ ++ +++ + RIN + Sbjct: 176 QAYVKRALAYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAK 235 Query: 250 ALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 A+L TD SI DI G S F +TF K+V +P +YRK Q Sbjct: 236 AMLKQTDISITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280 >UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3766F Length = 286 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 105/275 (38%), Gaps = 4/275 (1%) Query: 21 LYSEYQRMEIEFRAPHIM-PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWAC 79 + E QR + + I +HWH VEV +P + + ++++ I + Sbjct: 12 VEYENQRFVMLYDNDEIEEYPTHWHNAVEVIIPLHNGFTVVSGGVEYHLSEKEIIVIPPG 71 Query: 80 TPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ 139 H + IF + P + ++ V V + + + R+ Sbjct: 72 ELHSMPAQDG--RRIIFQCDNSVISEVPSLESIL-PVFSSAVHITPSLNKELYVLARKNI 128 Query: 140 QELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGF 199 ++ + +A I + L + E L + + + + + + Sbjct: 129 LDIYTEYYSKAPMADVRIYMYLITILTAIREFQLNSADENSASAAENSDESRKFGLVTKY 188 Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 I +NY L + +A + + IF++ ++ QYI + RI L++D+ I Sbjct: 189 INQNYMYELPLEKLASIAGYSKYHFSRIFKKYNNMSYIQYINSKRIKAAERLMADSSLPI 248 Query: 260 LDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 ++A+ GF S + F F K G +P ++RKL + Sbjct: 249 TEVAMQCGFSSLTTFNRAFRKAKGCTPTEFRKLFK 283 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 95/288 (32%), Gaps = 18/288 (6%) Query: 15 TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHIT 74 + + + I H H E+ G + + + G + Sbjct: 7 PYELPEVENHSFFFIDQRVTTSIEAKLHRHDAWELYYVVHGYGKRMAGDTLQPFAAGDVA 66 Query: 75 LFWACTPHQLTDTGTC-------QSMAIFNLPMHLFLSWPLDKDLINHVT-HGMVIKSLA 126 L H + + + + + + +L N +T +L Sbjct: 67 LIPPSMLHHWEYSPDSADDDGYVRYLMVAFSHSLVERCMAVFPELRNRLTGITFPTNALK 126 Query: 127 TQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVS 186 S +RR ++N +E R L + + K Sbjct: 127 FGTGSSQTIRRILSQMNDMDELGR----------LCEMFRLLPAIFTSSDHTFAGKPMNI 176 Query: 187 RHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRIN 246 + Q+ ++ +Y ++++D+A V +N + F+R +T QY+T R+N Sbjct: 177 ERDVRRMQQICVYVMTHYIHTISLDDIAAEVGMNRSAFCSYFKRCKGMTFSQYVTQYRLN 236 Query: 247 HVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 LL + K + +I T GF F F +GMSP +YR+ Q Sbjct: 237 TACELLKHSQKQVSEICFTVGFNDLPHFVRVFKNTLGMSPSKYRRRFQ 284 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 103/295 (34%), Gaps = 12/295 (4%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M + + P+ Y + HWH + E+ +G+ Sbjct: 1 MKYFDYKENKQHGTFDFPIEFY------HVTPNHSRYNMPYHWHTECEIIRILEGEFILF 54 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 I+ EK+ + I + H +F++ + L + K + + V H Sbjct: 55 IDKEKILAKKNDIIFVHSGIFHGGLPNDCIYECIVFDMKLLLKDNNACTKQIYDIVNHNK 114 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIR-QLAIDEIGLMLKRFSLSGWEPILVNKTSR 179 VI P V+ S E +R + E + L G Sbjct: 115 VI-----AHKLPSNVQALNNCCTSLFEAMRVKSTGYEFIAQGALYYLIGTILENQLYVKN 169 Query: 180 THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 ++ + ++ I Y LT+ D+++ ++ Y F ++ T +Y Sbjct: 170 NKYTKKTKERFLQLKNVITLIENEYQNPLTLEDLSKASGMSPKYFCRFFHEMINKTPIEY 229 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 + RI L T+ SI +IAL GF S F TF K+ G++P+QY K + Sbjct: 230 LNYYRIEISCEKLLATELSITEIALNCGFNDVSYFIKTFKKHKGVTPKQYLKSLK 284 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 101/259 (38%), Gaps = 16/259 (6%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT-CQSMAIF 96 M SH+H E+ +G+ ++I E ++ LF H + Sbjct: 27 MTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPFKRIVL 86 Query: 97 NLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE 156 L + + + L + + + E++ P + ++ Sbjct: 87 YFSPDLIANDTICQLLSEK--ELLFVNEGYIPNQILSLLLSLTHEIDVPGKYHDAYICNQ 144 Query: 157 IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 + +L +E +V + ++ + +I +Y + +++N +AE Sbjct: 145 LNGLLLNMLRLDFE-------------AVKSIPKTRSAKAVDYIHNHYMEDISVNQLAEI 191 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 + ++ + F+ T+ QY+ RI H + L+ +TD +I I+ GF + + F Sbjct: 192 LYVSPYHLCHEFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNR 251 Query: 277 TFGKYVGMSPQQYRKLSQQ 295 TF K G++P++ +KL Q+ Sbjct: 252 TFKKITGVAPREKKKLYQK 270 >UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQ90_9FIRM Length = 295 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 7/264 (2%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL--TDTGTC 90 H+ SHWH ++E DG +++ I + + ++G A + + C Sbjct: 33 SQAHLQMISHWHDELEFIYILDGKMDFHIEEKILTASRGDFLAIHASAMRRSAPHNGEDC 92 Query: 91 QSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRR--WQQELNSPNEQ 148 + + P L + + L++ + + SP RR +E+N NE+ Sbjct: 93 RFIRALIHPSLLTENQSVRNRLLSPLLGNTSRRCFLVPSASPDAPRRGELLREINRINEK 152 Query: 149 IRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQAL 208 E +L + K ++ AQ M+ +I+ +Y + + Sbjct: 153 HLPGFELESIGLLHILLARLYALFPPEKQTQEDMPGTDISAQRR---MVAYISHHYPEKI 209 Query: 209 TINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGF 268 ++ +A ++ + +F++ MQ + ++ R+ R LL T+ SIL+IA GF Sbjct: 210 SLAGIAAAGSVSRSKCCQLFKKYMQQSPIDFLNRYRLEISRNLLDSTENSILEIANACGF 269 Query: 269 RSSSRFYSTFGKYVGMSPQQYRKL 292 S S + F + +P QYR Sbjct: 270 SSQSYYTKMFSEKFNCTPTQYRSR 293 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 100/266 (37%), Gaps = 9/266 (3%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 + MP H H E+ +G+ Y +++ + +G + + H + Sbjct: 21 MSRNGSSSMPRPHEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHDLHSTASSEK 80 Query: 90 CQSMAIFNLPMHLFLSWPLD--KDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 + F+ +L++H T ++ L Q + E + Sbjct: 81 LLFERVLIGFSRTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSMLAECQTEQT 140 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 L + +L R + T ++ + +S++ +I N+ + Sbjct: 141 HYSSLVRSLMNELLIRL-------HRIETTLQSQTHEYEHPMHQKISEIAQYIKSNFHEK 193 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 LT+ VA+ ++ +Y +F R+ ++Y+ +RI + +L + S+ I+ AG Sbjct: 194 LTLEQVAKQFYISPSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELAG 253 Query: 268 FRSSSRFYSTFGKYVGMSPQQYRKLS 293 F + F TF K G +P QYRK Sbjct: 254 FEHIAHFNKTFKKIAGTTPLQYRKRH 279 >UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=Firmicutes RepID=B8DFE8_LISMH Length = 292 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 106/274 (38%), Gaps = 9/274 (3%) Query: 26 QRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT 85 ++ HWH ++E+ G + +N+ + + +G I + H Sbjct: 14 FPFRSFVNEGEVLVYPHWHKEIEIIYALKGSLNLGVNDMPIQLKEGEIQVINGGDVHYFL 73 Query: 86 DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 + + + + + LF D + + + + +++ V + Q + + Sbjct: 74 ASPSSER-VVIQFDLSLFQEEMQMDDQMQTLREMLTEMAHLSREWPEETVAKMQSLIMNI 132 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNS--------VSRHAQFYVSQML 197 +E+ + ++ +T +S S+ + Q+ Sbjct: 133 HEESSGEKPGKHYILKADLLAIIGLIYREIPQIKTQPDSVISEEAVLKSQETLHKLDQIF 192 Query: 198 GFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDK 257 ++ ++Y + +++ +VA + + Y F+R +T ++ R+N + +L + Sbjct: 193 SYVEKHYQEPVSLQEVANYTGFSTYYFTKFFKRNTGMTFVTFLNDYRLNKAKWMLLNEAF 252 Query: 258 SILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 + ++A AGF S F+ F + +G++P +YRK Sbjct: 253 PVTEVAELAGFSSVKTFHHAFKRAMGVAPLKYRK 286 >UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=Marinomonas RepID=A6VUH3_MARMS Length = 316 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 113/298 (37%), Gaps = 7/298 (2%) Query: 1 MNTDTFMCSSDEKQTRSP--LSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVE 58 M + ++ + E HWH ++EV + +G + Sbjct: 1 MQIYKIETEENGRELTTHGSHDFPCESYDEHFSHFVGG-EVPWHWHDEIEVVLVIEGATK 59 Query: 59 YLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTH 118 N + G + A T H+LT+ GT + I N+ + + LI Sbjct: 60 VECINSSDIVKTGEMVFINANTLHKLTNYGT-EDCRILNVVFSPKMLGGMGFGLIYKKHV 118 Query: 119 GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE---IGLMLKRFSLSGWEPILVN 175 VI + + W ++ + + ++ + + W N Sbjct: 119 LPVINNKELLFYKFSGAKAWHEQAINELAAAFNVWKEQGSDREFYMNIALMKFWYIFCTN 178 Query: 176 KTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLT 235 + T ++ ++ + + +L FI NY++ ++I D++E ++ + IF+ + + Sbjct: 179 QQDITATHNTAKANEKRIQSLLNFIHSNYEERISIADISEAANISESECYRIFRNALNCS 238 Query: 236 MKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 Y+ R+ LL++++K I DIA +GF S+ F F ++P Q+RK Sbjct: 239 PNSYLLNYRLRKSVQLLTESNKQIADIAFESGFNCSAYFAKKFKLAFNVTPMQFRKNY 296 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 118/292 (40%), Gaps = 8/292 (2%) Query: 7 MCSSDEKQTRSP--LSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNE 64 M + K+ + HWH ++E+ + G + I N+ Sbjct: 1 MTDENNKELAVHGNYEFPCAVY-FSYVSKYTAGEIDWHWHKEIEIINIYQGTLYVEIENK 59 Query: 65 KVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKS 124 K +++G + H + T + I + +F + D N++ + Sbjct: 60 KFILSKGDSLFINSEEMHFMK-MNTKEECVIISF---VFNKSLICGDKGNNIEQKYIDPL 115 Query: 125 LATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNS 184 + ++LS E+ + + + I ++++ I+ K+S Sbjct: 116 INCKELSALELTKEDSKKLAQAYYSYSNNILGYEIIVRNILSEILLNIIRKNQKLLEKSS 175 Query: 185 VSRH-AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAM 243 + + + + +ML FI +NY + +++ D+A+ + A+ F R + ++ +Y+ Sbjct: 176 NNSNTDKERIKRMLAFIYKNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLLKY 235 Query: 244 RINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 RI +L ++++ I +I L GF S S F F + +G +P++YRK + Sbjct: 236 RIYTAAEMLRNSEQPIAEICLQTGFNSPSYFSKVFCRMLGTTPREYRKNKVK 287 >UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CVW1_PAESJ Length = 294 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 114/295 (38%), Gaps = 12/295 (4%) Query: 4 DTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHI--MPTSHWHGQVEVNVPFDGDVEYLI 61 + P +Y+ I P HWH ++++ + G++ I Sbjct: 3 KQLYEAIRFPDETFPYIMYTH----TIHRSIPEGRGFNDLHWHEELQITLATKGNLTIQI 58 Query: 62 NNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWP---LDKDLINHVTH 118 N ++ G H +TD FN P L + ++K+ + T+ Sbjct: 59 NGIDYRLHTGQAIFINKSVLHIVTDLTAEGEYVSFNFPEKLLAFYSDSAMEKNYVLPFTN 118 Query: 119 GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTS 178 ++ + ++ L S ++ + ++ W ++ N + Sbjct: 119 SYLLSF--EIKGDTEWQKQILNILWSMKKEFEIKKSWGWQYEISIKTVQLWLILISNISL 176 Query: 179 RTHKNSVSRH-AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMK 237 + ++S Q + ML FI +NY +T+ ++A+ L+ + F+ +++T Sbjct: 177 PSEESSKHNRLKQERLQLMLSFIHQNYSNPITLKEIADAAHLSVSECTRSFKTSIRMTPY 236 Query: 238 QYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 Y+ RIN LL T+ +I +IA GF + F F K + ++P+++RK Sbjct: 237 SYLVKYRINKSCELLQSTEYTITEIASRVGFNQVNHFIQAFKKDLKLTPKEFRKN 291 >UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B4_EUBE2 Length = 291 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 99/262 (37%), Gaps = 9/262 (3%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ-SMA 94 HWH ++E+ G + ++ E +N G I + H + + Sbjct: 33 FTEVPLHWHNEMELIYIKKGCMIVSVDLEYSVVNAGDIVVVMPGHIHSIIQNESDSCEYE 92 Query: 95 IFNLPMHLFLSWPLDKDLINHV-----THGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 + + +S D D ++ +G ++ ++ + E ++ + Sbjct: 93 NILFNLDMLVSRQCDYDTVSFFNGIAGFNGYCPPVISKTAPHYSDLIHYIDEADNICKYF 152 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 +I L F + H +S + +L +I +N+ +A++ Sbjct: 153 PDGYRLKIRACLFNFFFELNAHFYTHTDMPVH---LSDDKMDKLKLVLNYIEKNFARAIS 209 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 I ++A+ + ++ M F+ + Y+ R+ +L T + ++ +A GF Sbjct: 210 IEEIAQWCHFSQSHFMKFFKNCTGTSFITYLNDYRLIIAARILKTTTQPVIIVASDCGFD 269 Query: 270 SSSRFYSTFGKYVGMSPQQYRK 291 + S F F + G+SP+++RK Sbjct: 270 NISYFNRKFKEKYGVSPREFRK 291 >UniRef50_C7MHG0 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MHG0_BRAFD Length = 300 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 23/287 (8%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 + I AP M + H H VE+N+ DG + YL + + I +G I +FWA PH L D+ Sbjct: 17 LWIRRGAPPPMFSMHRHDDVEINLVLDGQLHYLFGGQPLTIREGEIAVFWAAQPHGLVDS 76 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVT--HGMVIKSLATQQLSPFEVRRWQQEL--- 142 T ++P +FL+W L + + ++ + + RW +E+ Sbjct: 77 RTGDMC-WLHVPFSMFLAWGLPEAQTAPLLSAQPLITHAPDLARRIAHMAERWGEEVGGA 135 Query: 143 ---------------NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSR 187 + +++ ++A+ EI ++R + + SV Sbjct: 136 EPGGGTGAAGGADGSSRGDDESTEIALLEIQAAMRRVLRASSRA--NPEAPSDGGGSVPA 193 Query: 188 HAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH 247 VS M ++ +++ +T+ D+A V L ++AM +F+R +T+ Y+T R+ Sbjct: 194 ARLRQVSTMAQYVRDHHRSPVTVADIAASVHLAPSHAMTVFRRTAGVTLGDYVTMCRVAE 253 Query: 248 VRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 + LL T + +IA AGF S S FY GM+P++YR+ + Sbjct: 254 AQRLLLTTSLKVTEIAEEAGFGSLSSFYEHVSAACGMTPREYRRQRR 300 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 108/264 (40%), Gaps = 12/264 (4%) Query: 32 FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTC- 90 A M +H H E+ F G+ L+++ + G + + H+ + Sbjct: 16 REAAFRMDETHSHDCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEIHKTSYGSNDK 75 Query: 91 ----QSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPN 146 ++ F++ +L L KD + +I+ ++ + + N Sbjct: 76 VRQQRTALRFSIKDTDWLCSALGKDFVKDNLTAGIIEVPDKRK---EYIENLITRMIYEN 132 Query: 147 EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 + +L++ + + + F + L TS ++ + + ++ NYD+ Sbjct: 133 QMPDELSMGMVKTLFQEFMIFVLRCKLYGDTSAHEIDA----QNSTIQDVATYVYNNYDK 188 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 + ++DVA+ ++ +Y F++ K+Y+ +RI LL +T+ SI DIA Sbjct: 189 QIYLDDVAKQFSISRSYLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFAC 248 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYR 290 GF S+ F F + G+SP +YR Sbjct: 249 GFNDSNYFGDAFRRIKGISPNKYR 272 >UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PTM2_CHIPD Length = 291 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 100/273 (36%), Gaps = 8/273 (2%) Query: 31 EFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG-- 88 E H+H + E+ + +G + + N + G + F PH ++ Sbjct: 19 EEHFTVNEFPLHFHPEYELILILNGSGKRFVGNNIAEFSSGDLCFFGPNLPHTYSNKHIA 78 Query: 89 --TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPN 146 + DK + ++ KS+ + ++ + + + Sbjct: 79 GPRDIHQIVVQFNEDFLGKGFFDKAPFKPI-RALLDKSIRGFTFTGETLQEVTRMIRAMV 137 Query: 147 EQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 E + ++ +L + S +L +SR + R + +++ +I N+ + Sbjct: 138 EMDETAVVIQLLSVLYTLAKSAEFELL---SSRGFSSKSDRAESERMGRVMDYILRNFRE 194 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 + +N +A L+ F++ + T +++ +RI H LL + I++ + Sbjct: 195 EIPLNVIASVACLSPEAFCRYFKKYTRKTFSEFLIEVRIGHACKLLQQQLLGVNQISMQS 254 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQT 299 GF + S F F +P +Y+K+ R Sbjct: 255 GFNNISYFNRKFKSMTKKTPVEYQKMFAAGRLP 287 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 109/274 (39%), Gaps = 6/274 (2%) Query: 21 LYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACT 80 ++ + I + H H +E++ +G + + ++ + I +G + + T Sbjct: 13 FFNPDFDIFINREVEGFCLSQHTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPIGT 72 Query: 81 PHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQ 140 H + + I+N L + L + + + SL + ++Q Sbjct: 73 SHVFRPSSQDNQLVIYN----CIFRTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQD 128 Query: 141 ELNSPNEQIRQLAIDEI--GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLG 198 + + + + + + G + + +L S+ + + Sbjct: 129 KFDKFLSIMHGMFREYLKKGPRYEFLMMGQLIQVLAMLQRYECDGSMVSTPTNNMDDAIQ 188 Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 +I +++ LT+ VAE ++ ++ +F++ +T Q++ +R+ LL T+ S Sbjct: 189 YINDHFATNLTVQQVAERSFMSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEIS 248 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 I + A G++ F+S F K G++P++YR+ Sbjct: 249 IQEAANQVGYQDMKFFHSLFRKKTGVTPREYRRS 282 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 105/274 (38%), Gaps = 3/274 (1%) Query: 24 EYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ 83 + + +E R P H H E+ + G ++ + + G + PH Sbjct: 17 DGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELVTGDTFVIGGDRPHD 76 Query: 84 LTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELN 143 + + I P+ L LS + L + + + + ++ EL Sbjct: 77 YLNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKRHQFTSRLQLNPAELI 136 Query: 144 SPNEQIRQLAIDEIGL---MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFI 200 + L + +L+ + + + +++ + I Sbjct: 137 ETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCYIRTRNPESKKLLRIAEAISHI 196 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 ++D+ ++++D+ E ++ + F+ M+ + +Y+ +RI LL TD+SI Sbjct: 197 QRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQEASRLLRSTDRSIT 256 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 DIA GF S+ F F ++G+SP++YRK + Sbjct: 257 DIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_C4Z7H0 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=8 Tax=Bacteria RepID=C4Z7H0_EUBE2 Length = 303 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 93/260 (35%), Gaps = 2/260 (0%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 HWH VE+ G +EY + K+ G + + H + Sbjct: 41 YVPWHWHRTVELFYMESGSIEYDTSGGKILFPAGSGGMINSNVLHMTKAISQKEKNIQLL 100 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE- 156 + L I +I + + F ++ + +++ DE Sbjct: 101 HIFDVSLLAGEQGSRIEQKYITPIITVPQIEVIPLFPGNAEEERILKLLAASFRISSDEF 160 Query: 157 -IGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAE 215 + L+ W + S K + + M+ +I E+Y + L+I+++A Sbjct: 161 GYEIKLREALTEIWLMLFELSRSMREKKGEHNKSNDKIKLMMIYIHEHYREKLSISELAA 220 Query: 216 HVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFY 275 L+ +F + +T +YIT R+ +L+ + + I+ G SSS F Sbjct: 221 AAYLSERECYRVFHDCLHMTPVEYITTYRLQIACQMLAKGQEPVTVISHECGLGSSSYFG 280 Query: 276 STFGKYVGMSPQQYRKLSQQ 295 F +Y SP +YRK Q Sbjct: 281 KVFREYAHCSPIEYRKKWQN 300 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 102/275 (37%), Gaps = 7/275 (2%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 Y + + +HWH +E+ +P +++ +K + +G I + + P Sbjct: 14 YRNSMDFRLFHNVDYEDYPTHWHVGIEILMPVTEIYGVIVDQKKYVLQEGDILIVNSGVP 73 Query: 82 HQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE 141 H L T + I L S + L+ I L P + ++ Sbjct: 74 HALEAPPTGER-IILQFDPALLYSLKEMETLLLLFPPVFYITPENEPDLYPLVKAKMEEI 132 Query: 142 LNSPNEQIRQLAIDEIGLMLK------RFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQ 195 + + Q +++ R + R K Q + Sbjct: 133 IREYDGQQAFAGALVYASLIELFAGVGRITRERNIEGTALHDMRRSKQDRQWEYQEVALK 192 Query: 196 MLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDT 255 +I ++Y + LT+ + A+ V + + +F++ M +T +Y+ R+ LL T Sbjct: 193 ACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMTFYEYLNKKRVKCAEGLLYST 252 Query: 256 DKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + SI D+A+ +GF S S F TF SP ++R Sbjct: 253 EMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFR 287 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 101/257 (39%), Gaps = 14/257 (5%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 M SH+H E+ +G+ ++I + I+ G +F H + Sbjct: 20 MSKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRLLV 79 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 + ++ T Q V R +L + + D I Sbjct: 80 YFSKEEVDSVQLLKVLEKGTG-----VYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYI 134 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 +L L+ +R + V + ++ ++ +I +NY + ++I+ +A+ Sbjct: 135 HTLLNMALLTI---------ARNIQTPVKPEKRNRITDVISYIHQNYQEDISIDQLAQMS 185 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 ++ Y F+R T+ QY+ R+ + + + +T+K+I +I+ GF + + F Sbjct: 186 YVSPYYLCREFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRV 245 Query: 278 FGKYVGMSPQQYRKLSQ 294 F +GM+P +RK+ + Sbjct: 246 FKSVMGMTPSNFRKMYK 262 >UniRef50_Q2CBW0 Regulatory protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CBW0_9RHOB Length = 294 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 121/266 (45%), Gaps = 4/266 (1%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 + P IMP HWH Q+E+N G ++Y + + +++ G I LFW PH+LTDT Sbjct: 21 LHASRCEPGIMPAPHWHAQIEINYVERGALQYQMADHALSLPAGEIALFWGGLPHRLTDT 80 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 G + +LP+ F L + + G V+ + R + L S N Sbjct: 81 GADTIYHVIHLPLPHFFRLRLPPGVQRGLMTGAVLAAAGAPAEEEALFGRIRAYLASGNS 140 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPIL-VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQ 206 + AIDE+ L L+R +L + A + + + + + Sbjct: 141 RRAAHAIDELLLRLERIALEPHRLCGGRLGAAARGAEPGGHPALLRLFEAVAAV---FRD 197 Query: 207 ALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTA 266 + D+AE L+ YAM +F+R +++ Y+T +R++ ++ L + S+L+IAL A Sbjct: 198 EVRAADIAEAAGLHPKYAMSLFKRATGMSLADYVTLLRLSFAQSRLVADEASVLEIALDA 257 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRKL 292 GF S S F F + G +P YRK Sbjct: 258 GFGSVSAFNKAFRRQTGTTPTAYRKS 283 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 113/301 (37%), Gaps = 15/301 (4%) Query: 1 MNTD---TFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDV 57 M+ + + PL +Y+ R +F + HWH ++E +G Sbjct: 1 MDNKSYLQLKEQVNHGNMQLPLEVYNVEFRNSADFYS-------HWHDEMEFIYILNGSA 53 Query: 58 EYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVT 117 E I+ + ++ G + + H + + + + + + Sbjct: 54 EICIDFKIFSVTTGDFIIIPNGSIHYMIGKENSKISYVALVFNLSLIEGNTLDYSQINFV 113 Query: 118 HGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI--GLMLKRFSLSGWEPILVN 175 + ++ L + + + +NS N I L +K S + I Sbjct: 114 NPIMKNKLFFKNIIRTSNVGHAKIVNSFNNIIESYNNKSYGFQLEIKGSLFSIFSTIFKE 173 Query: 176 KTSRTHKNSVSRHAQFYV---SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVM 232 + NS + V +++ +I NY ++I ++A+ + + + + F+ Sbjct: 174 GYISLNLNSENYSDLIKVENLKEVIKYIQTNYKNPISIKELADIAQYSEYHFLRFFKAQT 233 Query: 233 QLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 T QYI RI LL DT+ SI +IA GF S F TF K++ +SP +YRK Sbjct: 234 GKTCTQYINYFRIQKATLLLFDTNLSITEIAYEVGFGDVSYFIKTFKKFLSISPTKYRKS 293 Query: 293 S 293 + Sbjct: 294 N 294 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 115/280 (41%), Gaps = 3/280 (1%) Query: 11 DEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQ 70 K+ R+ + Y + + + HWH ++E+ +G + I+NE Sbjct: 4 TLKENRNHGTKDYPYSQYHVFNQQTAFQFPIHWHDELEIIYIRNGSINITIDNELFTGTG 63 Query: 71 GHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL 130 G + H + P+ F+S+ + + N + M + Sbjct: 64 GSFFIVNPGELHYMGSNDLNADYYTILFPLE-FISFQSNDYVENMLFKPMRSSHVILTHS 122 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 P+ E+ S E++ + E G + E + + + +A Sbjct: 123 LPYS--EIYAEIISLLEKLIYINKYEKGFYQLDCKILLLEILSNILSIPDILVKKTSNAS 180 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 +++ ++ +NY + +T++D+A+ ++ Y F++ +T +Y+ MR+ + + Sbjct: 181 DMRREIITYVNDNYLEKITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKN 240 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 LL T+ SI D+AL++GF + S F +F + G +P YR Sbjct: 241 LLDTTNISITDVALSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMH3_9PLAN Length = 294 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 106/283 (37%), Gaps = 12/283 (4%) Query: 25 YQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL 84 + E A H H ++E+ G L+ + + G + L PH Sbjct: 14 HSFRCFERSALETPAKWHRHPELEITYVPYGTGTRLVGDHVARYSPGDLVLSGENLPHTW 73 Query: 85 TDTG------TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRW 138 + S + +N V M+ K+ SP V+R Sbjct: 74 LSDDFVGKKFDRHIAYVIQFSNDFLGSTFFESPELNDVRL-MLHKARRGLLFSPSAVQRV 132 Query: 139 QQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLG 198 + EQ + + L + G E + S + + + + + Sbjct: 133 GDIMKLMPEQQGLTQLISLFNCLNLLAEEGGEVL----ASEGYTPGFDHASDWRIDKACN 188 Query: 199 FIAENYDQA-LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDK 257 +I E+ + L+ + + V +N + +F+R T+ QY++ +RI LL +T Sbjct: 189 YINEHLEDPELSHAAICKEVDMNPSSFSRMFKRATGRTVTQYVSELRIGIACRLLMETGD 248 Query: 258 SILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 SILD++L +GF + S F +F K M+P++YR + ++ Sbjct: 249 SILDVSLKSGFDNLSSFNRSFRKIKQMTPREYRSTFLEAHKSA 291 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 106/275 (38%), Gaps = 12/275 (4%) Query: 24 EYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ 83 +Y+ E A M H+H E+ G+ LIN+ ++ G L H+ Sbjct: 12 DYKIDFAERDADFHMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMHR 71 Query: 84 L-TDTGTCQSMAIFNLPMHL--FLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQ 140 D + M L KD++ H+ H V+ + Q + + Sbjct: 72 FVYDCNSTVKRYNLFFTMDFAASLFHSDTKDILEHLFHYPVLHLTSLLQGNATRLFDTLY 131 Query: 141 ELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFI 200 + + Q I ++ + + I + + +I Sbjct: 132 QETVGQDSCSQAVIPAYISLILSLLVRNRDHIQLQDLDSAENA---------IQASARYI 182 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 + ++ + ++++ VA++V ++ Y F+++ + K+Y+T R+ LL+ T ++ Sbjct: 183 STHFQEPVSLHMVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLNVT 242 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 +IA+ GF + F F K G+SP QYRK + Sbjct: 243 EIAIRCGFNDGNYFGDAFRKEFGLSPLQYRKRQKN 277 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 105/262 (40%), Gaps = 6/262 (2%) Query: 37 IMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIF 96 H H E G+ N + + + +G + + A PH+L + + Sbjct: 32 FHMGFHQHDWTEFMYVISGNCTVETNKDVIAMRKGDLIMLDAGVPHRLI-VESGSPCRML 90 Query: 97 NLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI-- 154 N+ + + H + L Q+L +R ++ + + +L + Sbjct: 91 NVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQRLDTIVLRDYEDIQVNLRNLVFELDLGG 150 Query: 155 ---DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 ++ M+ +S + + KNS R YV Q +I + YD A+ Sbjct: 151 EGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQIHHYVRQATEYIHQYYDTAIQAK 210 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D+A V L+ Y IF+ M T+ +Y+ +R++ + LL+ TD I+++A G S Sbjct: 211 DIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKMLLARTDVPIIEVADHIGLNSR 270 Query: 272 SRFYSTFGKYVGMSPQQYRKLS 293 F F K G+SP +YRK Sbjct: 271 QYFSMLFKKMTGISPAEYRKSK 292 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 112/261 (42%), Gaps = 4/261 (1%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 HWH ++E+ +G ++ I+ + +G + + HQ+ + I Sbjct: 23 NYPPHWHDEIEIVKVLEGKIKVSISESVCFLEKGEMAIIKHKEIHQIQSLENESLLQIIQ 82 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 + + I+ + + I ++ + + +N + + + I Sbjct: 83 INYKFMETHFPHLSRISFENNLLNISKDINLNVASNLKQLINEMINYLSVRNQGYEFHVI 142 Query: 158 GLMLKRF-SLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEH 216 + K F S+ P ++ KN+++ + + +++ +I +NY + IN +AE Sbjct: 143 SAIYKVFGSIISNVPYTISTEDELEKNNITFN---RMKKIIEYIEQNYMNEININTLAEI 199 Query: 217 VKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS 276 + LN Y F++ L++ QYIT +R+N LL + SI +I L+ GF++ FY Sbjct: 200 LHLNKYYIAHFFKKHTGLSLGQYITNLRMNKATELLIKNEDSITNIILSCGFKNIKYFYK 259 Query: 277 TFGKYVGMSPQQYRKLSQQRR 297 F + SP +Y+ Q+R Sbjct: 260 VFREVYKCSPLEYKNNRQERS 280 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 100/254 (39%), Gaps = 8/254 (3%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP 99 HWH +E+N G LIN K+ QG I + H+ +T I P Sbjct: 55 RLHWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAYETENLVMDVIMFEP 114 Query: 100 MHLFLSWPLDKDLINHVTH-GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 L + D DL+ G V + +RR +E + L ++ Sbjct: 115 SLLSIDLKFDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLIRSDLI 174 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 L + + + + ++L + + D T+ ++++ Sbjct: 175 RFLSLANRHL-------SSPAQEHRPIKGRGMHALKEVLRTMELHLDYGWTLQELSDLTH 227 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 L+ + +FQ+ + + Y+ +R+ H LL TD+ I++IA T GFR+ S F F Sbjct: 228 LSPSRFSALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLF 287 Query: 279 GKYVGMSPQQYRKL 292 ++VG SP + R+ Sbjct: 288 KQHVGASPSEIRER 301 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 92/302 (30%), Gaps = 20/302 (6%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIM------PTSHWHGQVEVNVPFD 54 ++ T M + +++R+ + + + + HWH ++EV V Sbjct: 3 LHRTTVMVDTHGRESRA-----DDIHQFDFAAYDADMHQFISGCIPPHWHDELEVFVLLS 57 Query: 55 GDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLF----LSWPLDK 110 G VE + + +N G H + + D Sbjct: 58 GQVEVVTGDISCIVNAGEGCFINGGVLHTFRALSLGECRYHSFVFESSIVAGAPGSIFDT 117 Query: 111 DLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWE 170 + + +I L R L Sbjct: 118 KYMKPFVEKGHSFVHMKRDEGMEPFFEEFDRCFDACAGEGYAYEFDIRDSLTRMIL---- 173 Query: 171 PILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQR 230 + + + + A+ + MLG+I N +T++ +A + IF + Sbjct: 174 -CIAQNMNAPGDSDMPHLAEVRIKDMLGWIDRNLKDEITVSGIAGSANICVRECQRIFSQ 232 Query: 231 VMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + +Y+ RI LL T + + DIAL GF S S F F VG +P YR Sbjct: 233 YVHYRPMEYVQRRRITLAAELLRTTHRQVTDIALECGFSSVSYFIKQFKNIVGCTPTGYR 292 Query: 291 KL 292 K Sbjct: 293 KK 294 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 105/272 (38%), Gaps = 2/272 (0%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 Y EY +++ A HWH +E+ +P +G I ++ V++N+ I + Sbjct: 14 YKEYSNVKLFINAEAEDYPIHWHTPMEIIMPLEGGYTVQIGDDLVHLNENDIIFIASGVK 73 Query: 82 HQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE 141 H+L T + I + ++ + + + T +R+ + Sbjct: 74 HRLIAPDTGKR-LILQIEWSAVSKIKELNSILTLIAPAITLTP-ETSGDIHSNIRKLLLD 131 Query: 142 LNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 +++ + L+ I + + + + + +I Sbjct: 132 ISNEYQTDSFLSEAVIYSKILEVLVLIGRHHTASSCHFNVGRHKQQEYLERFLSICEYID 191 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 + + +T++++A+ + + +F++ T +Y+ RI LL+D + S+ + Sbjct: 192 THCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQKRIELALTLLADPNISVTE 251 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 A+ +GF + S F F G +P ++RK+ Sbjct: 252 TAMQSGFANPSTFIRVFKTEKGCTPTEFRKMF 283 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 107/288 (37%), Gaps = 4/288 (1%) Query: 7 MCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKV 66 M + K+ R + + +HWH ++E+ + G+ IN + Sbjct: 1 MIKDNCKEKREHGNFLLPLGIYNVSLGNIEKSIIAHWHNEIELILVLSGEFNLKINTDSY 60 Query: 67 NINQGHITLFWACTPHQLTDTGTCQSMAI-FNLPMHLFLSWPLDK---DLINHVTHGMVI 122 G I L + + H + S M S LD + I + + Sbjct: 61 TCKDGDIILINSGSLHYFSTKENESSTWNSIVFNMDQLNSNILDNCSVNFITPIINNEFK 120 Query: 123 KSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHK 182 + + S LN + + E+ + F +T+ Sbjct: 121 LPVIIHKDSLINNELKCIILNIIDTYNSKYYGFELEIKSLIFKYFSLLFKFNLVKKKTNN 180 Query: 183 NSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITA 242 ++ + +L +I ENY++ + IN ++ N ++ M F++ T Q+I Sbjct: 181 TCLNEEKIEKIKIVLEYIQENYNKEIDINRLSAICHYNQSHFMRFFKKHTGKTCIQFIKN 240 Query: 243 MRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 R+ +L+S+TD SI +I+L GF + S F +F + +P+ ++ Sbjct: 241 YRLEKAASLISNTDLSITEISLEVGFTNISYFIRSFKEKYNTTPKGFK 288 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 90/258 (34%), Gaps = 5/258 (1%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNL 98 HWH + E + +G +K + QG A H C + ++ Sbjct: 39 VPWHWHDEFEAVIVSEGTALIAAGTKKYTLKQGEGIFINAGILHAAWS-KNCSICHLHSI 97 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE-- 156 H L + H ++ + + + W +E E +E Sbjct: 98 TFHPRLIGGSIDSIFWHNYVQPLLTNPIVKHIHLDSSEAWHKEATHAIESAWNSCANEPF 157 Query: 157 -IGLMLKRFSLSGWEPILVNKTSRTHKNSVSR-HAQFYVSQMLGFIAENYDQALTINDVA 214 + + + + S + ML FI ++Y + ++ +A Sbjct: 158 GYEFQVHSSLSQLILHLSAYHPVISRQPSEKVLRNSNRLKLMLQFIQDHYHDQINVSMIA 217 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 + ++ + + F+ ++ + QY+ RI L+ T+++I I GF+ +S F Sbjct: 218 DTAMISESECLRCFRNIIGIPPIQYLKQFRIQKAVEFLTSTNETITKIGAKCGFQDTSYF 277 Query: 275 YSTFGKYVGMSPQQYRKL 292 TF + +P +YRK Sbjct: 278 VKTFREQKKCTPSEYRKN 295 >UniRef50_B3CFU1 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B3CFU1_9BACE Length = 280 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 15/292 (5%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 MN++ ++ P L E P +MP H ++E+N G++ YL Sbjct: 1 MNSEKCYSFDKFREEFKPYGLTCEAW-------VPRVMPRYDRHNEIEINYLPQGNITYL 53 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 +NEK+ I T+FW PHQ+ + + +P FLSW L ++ + G Sbjct: 54 RHNEKITIPNKRFTIFWGLIPHQIIHYENVEKYYVCTIPFAHFLSWKLPAQFVDSLLRGD 113 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 ++ + E +S L + E+ + R + + S Sbjct: 114 ILYEQTDEYSQYDEFLLNNWLKDSGVNTQSGLVLLEMQTRITRMA--------HHLQSSD 165 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 +++ + + ++ ++ +NY + ND+ + V L+ +YA IF++ T++ YI Sbjct: 166 DSMALASYQTTLIEKITIYLTKNYCNDIKANDLGDAVGLHPDYANHIFKKAFGTTIRDYI 225 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 +RI H + L TD SI DIA GF S +RF +TF K + +P++Y+K Sbjct: 226 AELRIAHAQRKLLTTDMSITDIAYECGFNSIARFNATFFKKIQCTPREYKKK 277 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 96/277 (34%), Gaps = 17/277 (6%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 H H E+ G +L+ +E I + + + Sbjct: 17 TCHLLYSTYSKYEEDWSSYPHTHYFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNIT 76 Query: 82 HQLTDT-GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQ 140 H + + + F +I+ ++ S + F R + Sbjct: 77 HTEKSSLEDPLEYIVLGVDGLNF--------VIDDANEYLLFHSDEMKDRLDFYFRTILE 128 Query: 141 ELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFI 200 E + + ++ + + +++ S +S + S+ +I Sbjct: 129 ETENSQKDYEKVCQNLLNILVVHLSRYA--------SSSVEIFPFHKMESRECSRAKRYI 180 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 ++ + +T++ +AE ++N Y F ++ Y+T RI + LL+ TD S+ Sbjct: 181 DSSFRENITLDKLAEIAQINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLA 240 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 IA GF SSS F F K GM+P YRK + + Sbjct: 241 QIAQQCGFSSSSYFTQCFRKSCGMTPTAYRKQFLRNQ 277 >UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RST4_9CLOT Length = 307 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 5/284 (1%) Query: 12 EKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQG 71 E Q A + HWH +E+ G ++ + + +++ QG Sbjct: 16 ELQPHGTPDFPCAGYSSVYTDSAGDV-VPWHWHEDLEIIYVESGHLKLQVPGKTLHLKQG 74 Query: 72 HITLFWACTPHQLTDTGTCQSMAIFNLPMHL--FLSWPLDKDLINHVTHGMVIKSLATQQ 129 + + H C+ ++ P+ + + + + Sbjct: 75 EGAVVNSNILHFAAAEPLCELHSLVFHPLLVTGEKDSVFSRRYVAPLLQCRSFDICPFDY 134 Query: 130 LSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSV-SRH 188 L+ + + +++ + + + + Sbjct: 135 LAGDLRAGNPAAVFTAAFDAFCGEPLGYEFVVREKLSCICCCLYMYYSHAMDSSKPMPDT 194 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINH- 247 + +M+ FI E++ + L + +A + + F+R +Q + QY+ R+ Sbjct: 195 DNIRIQKMISFIHEHFQENLDLAQIARAADIGERECLRCFKRAIQTSPLQYLLKYRVTQG 254 Query: 248 VRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 LL SI IA GF S S F F ++ +P++YRK Sbjct: 255 ASMLLRSPHSSISSIAGMCGFNSPSNFSQMFVRFFKCTPREYRK 298 >UniRef50_B6A065 Transcriptional regulator, AraC family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A065_RHILW Length = 287 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 4/264 (1%) Query: 20 SLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWAC 79 + +E M ++HWH +EVN+ +G + YL N ++ + GH+ LFWA Sbjct: 11 EWLGSPRAFTVERHVADTMASAHWHDHIEVNLLLEGSMTYLFNGKQEFVEAGHLVLFWAA 70 Query: 80 TPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ 139 PHQ + LP+ FL+ P+D V G I + T + RW Sbjct: 71 IPHQTIFVTPESPLICIYLPLVDFLALPIDAASRQAVLQGAFISEVETFSSTSAARERWV 130 Query: 140 QELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGF 199 + + RQL DE ++++R L + + + +S Y + Sbjct: 131 DDWLKGDNARRQLVKDETSIVVRRLMLD----HVRKRAAPPPVPKLSGPEVKYAQVLTEL 186 Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 I+ Y + LT+ +A H ++ A F+ V+ +++ +Y+ R+ L++TD I Sbjct: 187 ISRQYSEELTLPSIARHAHVHPTTANRAFRSVLGISVMEYLGRYRLARAMQRLAETDDPI 246 Query: 260 LDIALTAGFRSSSRFYSTFGKYVG 283 L+I GF S++RFY F K G Sbjct: 247 LNIMNDCGFGSTARFYDAFKKTDG 270 >UniRef50_Q4ZTP2 Helix-turn-helix, AraC type n=23 Tax=Bacteria RepID=Q4ZTP2_PSEU2 Length = 307 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 111/304 (36%), Gaps = 18/304 (5%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRA---PHIMPTSHWHGQVEVNVPFDGDV 57 MN T + L ++ + I +R P + H+H + E+++ Sbjct: 7 MNKTTRIADPS-------YELMDDHNGLSIIYREHGFPCPLVRWHFHKEYELHLIVASSG 59 Query: 58 EYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA-----IFNLPMHLFLSWPLDKDL 112 + + + N N + L PH + + N L S + Sbjct: 60 KVFVGDYIGNFNPASLFLTGPNLPHNWISQIDDGEVVPKRDMLVNFTDELLESG---NQV 116 Query: 113 INHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPI 172 + + A + R +Q + + I +G L Sbjct: 117 FAELKTLTPLLERARYGIEFRCKRTIRQAMKQMQKIADSRGITRLGHFFILLELLAASDD 176 Query: 173 LVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVM 232 + ++ H+ ++ + +I +Y + L + +VAE++ + Y +F++ Sbjct: 177 YQLLSGTAVAHTADEHSVDRTNRAVDYIFAHYGRELPLEEVAEYLGMKPTYFSRVFKQAT 236 Query: 233 QLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 +++ +RI+ LL+D DK + D+ +GF + S F F + GM+P YR+L Sbjct: 237 GRCFVEFVNRLRISKSCELLADGDKPVTDVCFESGFNNISNFNRRFQQLKGMTPSHYRRL 296 Query: 293 SQQR 296 + QR Sbjct: 297 AVQR 300 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 110/282 (39%), Gaps = 16/282 (5%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTC-- 90 R M HWH +VE+ G+ +N E+ NI++ H ++ Sbjct: 30 RIKGNMVKHHWHEEVELLYFSGGEFCLEVNMERFNISEECFYFINPGELHSISVEKNGGC 89 Query: 91 -QSMAIFNLPM--HLFLSWPLDKDLINHVTHGMVIKSLATQQLSP--FEVRRWQQELNS- 144 ++ +F++ M + + +LI V +G + ++ P VR+ +E+ + Sbjct: 90 VENAVVFHMDMLNSAYALDQIQTNLIQPVQNGSIQFPRCLRKNEPAFEPVRKSYEEIRNV 149 Query: 145 --------PNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQM 196 + D + + +L +L H + Sbjct: 150 FGGDSFRENYYDGEAVTDDITRQLFIKSALLRILAVLSANNLFEVTEKNHDHRIETIKTT 209 Query: 197 LGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTD 256 L +I ENY + + I D+A + +N Y F++V+ + +Y+ RI L ++D Sbjct: 210 LTYIQENYKEKIYIRDLAGLIGMNEQYFCRFFKKVIGRSPMEYVNEYRIKRAIHYLKESD 269 Query: 257 KSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 ++ +I L G+ + F F KY +P QYR+ S + Q Sbjct: 270 LTVTEICLECGYNNLGNFLREFRKYTSTTPLQYRRHSLKETQ 311 >UniRef50_B4D507 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D507_9BACT Length = 288 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 103/284 (36%), Gaps = 2/284 (0%) Query: 13 KQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 K T ++ ++ +E R P T H+H + ++ + G ++ + + G Sbjct: 2 KVTYHQVTQTTQESFRVMELRGPDYKCTWHFHPEYQLGMVVKGSGHRIVGDNIGPLEAGE 61 Query: 73 ITLFWACTPHQLTDTGTCQ-SMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLS 131 I+L PH + + + F L D + + L + Sbjct: 62 ISLLGPNLPHAWQFEDAPRGQRKELHGIIIYFREDFLGADFFQRPEAERIHRLLKRAAVG 121 Query: 132 PFEVRRWQQELNSPNEQI-RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 + ++ + + + R+ + +L+ L LV S + Sbjct: 122 LQVRGKTRRTAAALMQALPRRQGFARVLDLLQLLDLLAGSEELVPICSAGFLPQLPDQHG 181 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 + ++ I + + L +++A + F+ T +++ +RI Sbjct: 182 ERLRRVCELIQQRIAEPLNRDEIARLAHFSPGAFSRFFKARTGKTFHEFVNELRIGRACR 241 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 LL++ + +I +IAL GF + + F +F + +P Q+R+ Q Sbjct: 242 LLAEQELNITEIALGCGFANVASFSRSFRRAKRCNPTQFRRKLQ 285 >UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8E9_PAESJ Length = 294 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 116/276 (42%), Gaps = 12/276 (4%) Query: 27 RMEIEFRAPHIMP------TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACT 80 ++ + +MP HWH +E + DG + + +N E V + +G + Sbjct: 19 NFQLYIKKGTLMPFDKYAAACHWHPDLEFILVLDGYMNFFVNGETVLLEKGTGIFVSSKR 78 Query: 81 PHQLTDTG--TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRW 138 H C + + P L + K+ + + + Sbjct: 79 LHYGYSPDKIDCSYIVVCIHPSLLGNEQWIGKEYWEEKFGPNTEDFIVLTEHESWHKDAL 138 Query: 139 QQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLG 198 LN E++ + I L+ SL+ + ++ + + + FYV +M Sbjct: 139 VS-LNQLYEEMHATKRNPIRLLSIAMSLTA---NIGDRIGEKKEPTAIDPSWFYVWKMTA 194 Query: 199 FIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKS 258 FI +++ +T++D+A ++ + +F + ++ + Y+ RI LLS+TD+S Sbjct: 195 FIHGHFEHKITLDDIAAAGSVSRSQCCILFGKYVEQSPNTYLMKYRIKKSCELLSETDRS 254 Query: 259 ILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 I +IA++ GF+SSS + F K +G+ P +YR+ + Sbjct: 255 ISEIAISCGFQSSSYYTFVFRKELGIVPNEYRRQYR 290 >UniRef50_C9KIY1 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIY1_9FIRM Length = 298 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 104/296 (35%), Gaps = 8/296 (2%) Query: 5 TFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNE 64 T ++K+ S+ + E HWH + E + F+G + + E Sbjct: 7 TLHTDKNQKEITRHGSVL--FPVACYEDDMACTDVPIHWHDEFEYILAFNGTIHLHVGTE 64 Query: 65 KVNINQGHITLFWACTPHQL-TDTGTCQSMAIFNLPMHLFLSWP---LDKDLINHVTHGM 120 + + QG L A H + + + L P + L+ Sbjct: 65 PITLRQGAGILINAGLLHSVSHSLRKPSILRSLVVHPDLIAGSPQSCYWQKLVLPFYGRQ 124 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 + L + P+ +++ + ++ + + + + N S Sbjct: 125 NLPFLLMEGNEPWHATIAHLMMHAWDAITQET--EAYTIEARYALSKALHILCQNLPSSP 182 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 S + +L +I ++Y + ++ + + + + F++ + + Y+ Sbjct: 183 PTISRDVSLLERMKLLLQYIEQHYMETISNQTLMRLAACSESVLLRSFKKTVGTSPMNYL 242 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 RI +LL TD + +IA+ GF S F F + G++PQ++R + + Sbjct: 243 QNYRIQQASSLLLSTDMTSSEIAIATGFHDISYFTKIFHRTTGLAPQRFRAAHRTK 298 >UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C2KAS7_9FLAO Length = 311 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 101/255 (39%), Gaps = 6/255 (2%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ--LTDTGTCQSMAIFNL 98 H+H +VE+ G + I + ++G + L + PH ++ + + Sbjct: 56 WHYHPEVELIFVCKGSGKRQIGSSITYFSEGDLVLIGSNLPHCGLTNESTHNEYEMVIQF 115 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 D + + ++ KS A +R +E+ +E ++D++ Sbjct: 116 KPDFLGEPIWDIPEMQRI-SALLEKSKAGIVFGEEVKKRIGKEITEMHE---TSSLDKLC 171 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 LK + + ++ + ++ +++ +A+T+ +VA+ Sbjct: 172 RFLKILDELSVTQDYRILNAGKYYLQTQVEDNERINLIFNYVKDHFKEAITLEEVADLAN 231 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 + F+++ T Q++ RI H LL++ SI ++ +GF + S F TF Sbjct: 232 MKVPSFCRYFKKITNKTFTQFVNEYRITHALKLLAEQPLSITEVCFESGFNNFSYFNRTF 291 Query: 279 GKYVGMSPQQYRKLS 293 +Y+ SP QYRK Sbjct: 292 KEYIQKSPSQYRKEF 306 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 106/280 (37%), Gaps = 2/280 (0%) Query: 19 LSLYSEYQRMEIEFRAPHI-MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFW 77 + +E R H M H HGQ E+ F G+ +Y I + K I G + L Sbjct: 9 YGDSEDLFFLEYNKRKGHFTMSVEHIHGQYELYYLFSGERQYFIKDRKYPIAAGDLVLIP 68 Query: 78 ACTPHQLTDTGTCQS-MAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVR 136 A H+ +DTG + F + ++ + + Sbjct: 69 ANELHKTSDTGVPNHARIVLYYNEKYFEQYGKEESELLLSPFLGSRRVFRLAHQERLRFE 128 Query: 137 RWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQM 196 + L ++ I + L + NK + + A ++ Sbjct: 129 QLLYGLLQEVQERPPGHEMPIRHAVAEALLFAARHAIHNKPDPSDGSVPPSPAAAKAMEI 188 Query: 197 LGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTD 256 ++A+++ + LT++ ++ L+ +Y F++ + +YI R+ + L +TD Sbjct: 189 ASYVADHFREPLTLDSLSRQFHLSTSYLSRTFKKYTGFGLTEYIGITRVKEAQHQLRETD 248 Query: 257 KSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 + I +IA GF S S+F F ++ +SP+ YR Q+ Sbjct: 249 ERITEIAAEVGFESLSQFERVFKTHIRLSPRDYRNQYGQK 288 >UniRef50_C0A1S6 Transcriptional regulator, AraC family n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A1S6_9BACT Length = 308 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 15/278 (5%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 M + H ++E+N G + + E V++N G +WA PHQ+ + Sbjct: 29 EAMAAADQHNEIELNFIERGAMVFRRGVETVSVNAGEGVAYWAAVPHQVLAVEADTVITW 88 Query: 96 FNLPMHLFLSWPLDKDLINHVTHGMVI-KSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 ++P+ FL W L + G ++ + F + W ++ S E+++ + Sbjct: 89 VSVPLSWFLGWELPAVFTRRLLEGGLLGMPAELTGGTVFSLAGWGRDFASEAEELKVVVR 148 Query: 155 DEIGLMLKRFSL--------------SGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFI 200 E+ +R++L +G + + + + +V +M+ +I Sbjct: 149 LELEAFFRRWALGATKASGVELAAAVAGEAALGTGLRLSGVLSGGNGYQCRHVERMVRYI 208 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 E++ +T+ VA KLN YAM +FQ+ +T+ +++ R++ R LL +D ++ Sbjct: 209 NEHFRDEITVAMVAGAAKLNPEYAMRLFQKRWGMTLWKFLLRQRVSEARRLLLLSDTPLI 268 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 +IAL GF+S SRFY F G SP YRK + Q Sbjct: 269 EIALGCGFQSLSRFYEAFKAECGCSPGAYRKRHAKPSQ 306 >UniRef50_C7PTR1 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PTR1_CHIPD Length = 298 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 110/300 (36%), Gaps = 11/300 (3%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDV-EY 59 M DT + ++ S L H H ++E+N+ G + Sbjct: 1 MLNDTILQKKVLREITS---LGVHDCCSIFFRHKRQFAFPLHTHEELELNLVLGGAGIQR 57 Query: 60 LINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI---FNLPMHLFLSWPLDKDLINHV 116 +I + +I + L PH + + LF L+ +L+ H Sbjct: 58 IIGDHIGHIGHAELVLVGPNLPHGWFTLDDREEDILEVTLQFRKELFTEGFLNTELL-HA 116 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNK 176 ++ + +P R ++L + ++ + + +L S++ +L + Sbjct: 117 IRKLLDNAGRGILFTPDVAERVYEKLLALDKMSGFDSFIGLLSLLHELSVAKDTTLLSSV 176 Query: 177 TSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 + + + Q ++ +Y + + +A+ V ++ + LT Sbjct: 177 SFSREEIVSESRQ---LEQAFEYMNRHYGNPIALTAIAKVVHMSEASFSRFMKAQTGLTF 233 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 + + +R+ HV +L T +I +IA GF + + F F ++ G +P++YR ++ Sbjct: 234 TENLVELRLGHVARMLVTTQLTIAEIAYHCGFNNMANFNKLFKRHKGCTPKEYRSNYNRQ 293 >UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Clostridium difficile RepID=Q184W8_CLOD6 Length = 295 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 114/285 (40%), Gaps = 11/285 (3%) Query: 19 LSLYSEYQRMEIEF------RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 +++Y E ++ EF ++ T HWH ++E+ + +G V IN++ + + +G Sbjct: 1 MAIYLEMPKLIHEFPFRSLSNEGEVLTTPHWHKEIEILLITEGVVNLFINDKPMQLKKGE 60 Query: 73 ITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLD----KDLINHVTHGMVIKSLATQ 128 I + H + + + +F + F L + LIN + + Sbjct: 61 IVIIKGGDIHYILPSPGSER-LVFQFDISFFNDLILLNEEKESLINLFSSIKKCSRDWSA 119 Query: 129 QLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRH 188 ++ N +I + G M + + + + S+ Sbjct: 120 KIRKSVFDILIDIYNEDLYKIEGYSYAIKGKMYNLIPILYRQIPREIEENTVEYEINSKE 179 Query: 189 AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHV 248 ++ + ++ +NY Q + + DV+ V + Y F++ T ++ R+ Sbjct: 180 ILERLNNIFKYVEKNYKQPIKLEDVSYEVGFSVYYFTKFFKKNTGKTFITFLNEYRLEKA 239 Query: 249 RALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 + +L + + SI+D+ GF S+ FY F + +G+SP +++K Sbjct: 240 KWILLNNNISIVDLVEEVGFGSTKTFYRVFKEKIGVSPLEFKKRY 284 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 114/291 (39%), Gaps = 8/291 (2%) Query: 4 DTFMCSSDEKQTRSPLS--LYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLI 61 + + + + + S +Y +E H + HWH + E G+V I Sbjct: 8 NKILTDEEFMEIKQHGSSDYPFQYYYDNLELFDFHCI-EWHWHREFEFLYVESGEVTCGI 66 Query: 62 NNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMV 121 +++ +++G + H+ I N P + + ++ Sbjct: 67 GEKQIILSEGEAIFINSKILHRFYAPSGG---IIPNFVCMPEFIAPENSLIYKKYILPII 123 Query: 122 IKSLATQQLSPFEV--RRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSR 179 ++ Q+ E+ + Q + E I E+ + L V + + Sbjct: 124 SSNIYFQRFQTDELWQTKIIQTMIKIMEIQGNEKIRELATLALMQDLWLTFYENVKLSDK 183 Query: 180 THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 +V AQ V ++ +I ENY+ L+++++A H+ ++ + A+ +F R + T Y Sbjct: 184 GDVQTVDEVAQKRVQLIMQYIHENYNHNLSLDEIASHIGISKSTALNLFHRFLHTTPVNY 243 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + R+ LL +T+K + IA +GF + F F K ++P +YR Sbjct: 244 LIGYRLQAASWLLKNTNKKVKTIAYESGFHNVDYFCRLFKKRYHLTPSEYR 294 >UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH72_9FIRM Length = 294 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 105/257 (40%), Gaps = 4/257 (1%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 HWH +E DG ++Y IN ++ I QG + + H + I Sbjct: 35 GYEALCHWHPDLEFIYIIDGAMDYFINGNRIPIRQGQVIFVNSRRLHYGFSRQKEECTFI 94 Query: 96 -FNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 + LF + + G ++ + ++ +I + Sbjct: 95 ALVVHPSLFTNSFDKAWIFAEQKFGFANVDYILLDSHISWQKKMIEGIDRIYREINAASF 154 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 + + L+ + S+ + + K++V+ Q M +I NY + LT++ +A Sbjct: 155 NPLRLLAEAISICADAGEHIETMESSGKHNVT---QMAFLNMTEYIQNNYREKLTLDKIA 211 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 + + + +F++ ++++ Y+T R++ LL DT+ S+ +IA GF+S S + Sbjct: 212 GAGAVCRSKSCQLFRQYVRMSPVAYLTKYRLSKSAELLRDTELSVSEIASLCGFQSPSYY 271 Query: 275 YSTFGKYVGMSPQQYRK 291 + F K G +P YRK Sbjct: 272 INLFKKETGQTPLNYRK 288 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 102/266 (38%), Gaps = 4/266 (1%) Query: 26 QRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT 85 + H MP SH+H E+ G E+ I + + I++G I + H+ T Sbjct: 13 FSVSYRKARSHNMPVSHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDIVIISPNILHRTT 72 Query: 86 DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 +T T + + ++ D+++ ++ + T Q Q + Sbjct: 73 NTETPEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIETMLQTMIAEM 132 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 +E+ + + L L+ + K+S +S+++ ++ +Y Sbjct: 133 SEKKPGFELYALTLALQLLLICCRHA----KSSSMETLESPSPMHERISEVVRYMNSHYM 188 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 L+++ +AE ++ Y F+ T +Y+ ++RI + LL + + IA Sbjct: 189 NELSLHLLAEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVNLIAKR 248 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRK 291 GF S + F F G P YRK Sbjct: 249 VGFGSVTHFGRVFKSVTGYVPLHYRK 274 >UniRef50_B3C996 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C996_9BACE Length = 282 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 72/295 (24%), Positives = 132/295 (44%), Gaps = 17/295 (5%) Query: 2 NTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLI 61 +++ +++ P L E R P +MP H ++E+N +G + Y Sbjct: 3 DSEKLKTFDEKRDEFKPYGLTCEIWR-------PQLMPKIDRHNEIELNYIPEGGITYFF 55 Query: 62 NNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMV 121 KV + ITLFW PH++ + + + +P +LFL W L ++N + G V Sbjct: 56 PTGKVTVPPRKITLFWGLIPHKIIKSESDAPYFVVTIPFNLFLGWRLPSTIVNRILGGEV 115 Query: 122 IKSLATQ--QLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSR 179 + +L RW ++ S ++ EI + R ++ + Sbjct: 116 VVETVESECRLDKPMFERWVSDMASKQN--QEAVSLEIQARILRL------TKNMSVSEA 167 Query: 180 THKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQY 239 ++ + +++ +IA N+++ + I+D+ V L+ +YA IF++ T+ +Y Sbjct: 168 KPTAILNPADASILERIVVYIAHNHNRPIKISDIGRAVGLHPDYANAIFKKAFGCTLSRY 227 Query: 240 ITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 + RI V+ L TD SI IA GF S SRF +TF G +P+ YR+ ++ Sbjct: 228 VAEERIGQVKRKLILTDMSITQIAFECGFNSISRFNNTFFNICGQTPRCYREQNK 282 >UniRef50_A9KRM0 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=A9KRM0_CLOPH Length = 296 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 101/272 (37%), Gaps = 1/272 (0%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 Y E + + + HWH E+ +P + E ++NN + + G I L + Sbjct: 14 YDENIGIRLYLNEEYEDYPIHWHTAAEIIMPIENTYEVVVNNIRHELEVGDIILLPSGEL 73 Query: 82 HQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE 141 HQL + IF L + + + +I + + + Sbjct: 74 HQLYAPTKGKR-IIFQFDYSLLYNLTGFDSVFHMFHPCTLITNETMPDIHDNLHSLMLRI 132 Query: 142 LNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 ++ +++ F + G I K K+ + I Sbjct: 133 MDEYFGDSPLKEAAIYSMLVNFFVILGRNYITSEKKFPNTKSPKRHEYIDKFLMVCTHIN 192 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 E+ + + ++D+A+ + + M +F+ ++ Y+ RI H LL D + +I + Sbjct: 193 EHCTEPINVDDLAQLAGFSKYHFMRLFKEFSGISYYDYLNKQRIMHAEKLLIDPNLTITE 252 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 IA+ +GF S + F F + +P +Y++L Sbjct: 253 IAMHSGFNSLATFNRIFKEQKQCTPSEYKRLH 284 >UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G478_ABIDE Length = 299 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 105/287 (36%), Gaps = 6/287 (2%) Query: 7 MCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKV 66 S ++ + S++ + + HWH ++E+ + +G V I N Sbjct: 9 KTDSSGRELLT--YGTSDFPIAFFDDDLTKVKVPWHWHDELEIIIITEGSVSVQIANSSF 66 Query: 67 NINQGHITLFWACTPHQLT--DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKS 124 +N+G + H Q IF+ + + K I + + Sbjct: 67 VLNKGEGYFLNSGILHSAKLLSPKGHQRALIFSPEIAAHNEDIVWKTYIKPIFKKQALPF 126 Query: 125 LATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKR-FSLSGWEPILVNKTSRTHKN 183 + ++ + + + I + S + + + T Sbjct: 127 IKLSPGISWQNSILRLSNDVWLTGAYEKTDYPITVRHNLTKVFSLIKSNIDLIENETEFT 186 Query: 184 SVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAM 243 ++ + + ++L FI NY +TI D+A+ ++ + + +F+++++ T QY+ Sbjct: 187 HKTKQDELRIKKILFFIENNYSTTITIADIAKSGDISISSCLRLFKQILKTTPIQYLIKY 246 Query: 244 RINHVRALLSD-TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQY 289 R+ +SI DIA + GF ++ F F K G +P +Y Sbjct: 247 RLQKAVEEFDSLEGRSIGDIAYSCGFSDATYFNRCFKKEFGCTPTEY 293 >UniRef50_D1PME6 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME6_9FIRM Length = 323 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 108/277 (38%), Gaps = 1/277 (0%) Query: 23 SEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH 82 +++ ++ MP+ H H + E+ G Y + +N G + + H Sbjct: 47 TDFFIERLDRDKGPDMPSFHIHHKFEIYYEIAGTCRYFVEGAAYIVNAGSVVMIGENQIH 106 Query: 83 QLTDTGT-CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE 141 + G S + N ++ + ++ ++ + Q Sbjct: 107 KTASLGDSPSSRIVVNFSREYLEKVAAAFPEVDFFSFLTDERNHLLSAITVKQQNHIQSI 166 Query: 142 LNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 L + + + ++ L + E + + R + V Q+ +IA Sbjct: 167 LQQMLDLEGETSPEDQALRAMLLATLLLELKALCVQQQCQGGEKGRVSNHIVEQIQAYIA 226 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 ++Y + LT+ +A ++ Y +F++ L++ +YI +RI + L+ + +SI Sbjct: 227 QHYAEKLTLTGIASQFYISPYYLSRLFKKSTNLSLIEYINGVRIKAAQNLIEKSGESISS 286 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 +A GF +++ F F G+SPQQYR+ ++ + Sbjct: 287 VAGQTGFMTTAHFRRVFKDATGLSPQQYRQQYKRINK 323 >UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZHR1_EUBR3 Length = 276 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 102/272 (37%), Gaps = 10/272 (3%) Query: 25 YQRMEIEFRAPHIMPTS-HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ 83 + + + + + HWH +E+ G ++ + + + + + + H Sbjct: 14 HLPIYCDRYEDYRQFSPRHWHDHIEIIYVVSGSLQVVCGENEYTLKENEFFVINSNKIHG 73 Query: 84 LTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELN 143 + + + +P S+ D I + + + + + L Sbjct: 74 TQSYERVRVLLV-QIPYAYLDSYIDDYGQIRF-------RECYETENGSRKYEQMKSLLK 125 Query: 144 SPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAEN 203 S R+ L L + N + + + +L ++A+N Sbjct: 126 SIAHIYRKKGKG-YELRLMAKVNEFLYILFTNYSYKEMNAGKESRQIARLKDVLRYVAKN 184 Query: 204 YDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIA 263 Y + + + + A+ LN +Y +F++ M +T +Y+ +RINH+ L T+ SI DI Sbjct: 185 YQEPIALKEAADIASLNQDYFCRMFKKCMGVTFLEYVNQVRINHIHEELLATEDSITDIL 244 Query: 264 LTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 GF + F F GM+P++ RKL + Sbjct: 245 EHNGFTNYKVFSRMFKAQFGMTPRELRKLQEN 276 >UniRef50_C7G8V4 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7G8V4_9FIRM Length = 310 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 106/277 (38%), Gaps = 1/277 (0%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 + + + I + + +HWH +E+ +P + + + + +I I + + Sbjct: 34 FQKDSTIRIWYNEQNQNYDTHWHNAIEIILPVENHYDVEASGQAYHILPSEILIIPSGEM 93 Query: 82 HQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE 141 H L + + IF + + + +T + I Q+ + Q Sbjct: 94 HALYAPESGKR-FIFLFDVSSIAQMKGYTSIQSLMTSCLHITKTTYPQIYNDVYQLLVQM 152 Query: 142 LNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 N + ++ F G I ++ + +++L +I Sbjct: 153 RNEYFSSNEFRELAIYSHLINLFVSIGRNRINNVDLFPNTRSHKQKEYLQKFNEVLDYID 212 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 +Y + LT++++A+ + + +F++ T Y+ RI LL++ + SI + Sbjct: 213 SHYTEELTLDNIADFSGFSKYHFTRLFKQYTDSTFYDYLIYRRIKAAEELLANPELSITE 272 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 IAL +GF S S F F + G +P +YR L R Sbjct: 273 IALQSGFSSISTFNRIFKQKKGCTPSEYRSLYSMNRH 309 >UniRef50_A3HT27 Transcriptional regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HT27_9SPHI Length = 293 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 103/273 (37%), Gaps = 16/273 (5%) Query: 31 EFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG-- 88 E AP+ H+H + ++ V G I ++ +G + + PH Sbjct: 20 ELIAPYFDKYWHFHPEYQLVVILKGRGTRYIGDDIKPFKEGDLVMTGPNLPHVWRSDDIY 79 Query: 89 ------TCQSMAIFNLPMHLFLSWPLDKDLINHV--THGMVIKSLATQQLSPFEVRRWQQ 140 + + P + +K+ + I+ L+ S EV + + Sbjct: 80 FDPENDLETHLIVIYFPEDFLGNGIFEKEEFEDIGRLMKASIRGLSVNGKSNAEVTKMMK 139 Query: 141 ELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFI 200 +L ++ ++ +L+ + + T+ + N + + ++ ++ Sbjct: 140 KL------VQLKGSSQLVQLLEILTYLSHSKDITPITNPEYINLNKESEKDRMGEVYEYV 193 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 NY +T+ +VAE L+ + F+ + +++ +RI+H LL + D I Sbjct: 194 MNNYKSKITLQEVAELANLSVSAFSRFFKSRANKSFSDFVSDVRISHACKLLHEEDIHIS 253 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 ++ +GF + S F F +G +P YRK Sbjct: 254 EVCYESGFNTLSNFNKQFKDRIGKTPLNYRKEY 286 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 25/285 (8%) Query: 26 QRMEIEFRAP--HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ 83 ++ E M SH+H E+ G ++ ++ +N G LF H Sbjct: 5 YQIACERIQGVNDNMAKSHYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMHH 64 Query: 84 LTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELN 143 S K L+ + T M+ T L E N Sbjct: 65 -----------------SYGDSGVSFKRLVLYFTKEMIAVPGVTDVLDQHAWVYKSDEKN 107 Query: 144 SPNEQIRQLAID-EIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 + +R L + E +L ++ R + Q ++ ++ ++ E Sbjct: 108 ETHALLRALLKEQEFNDNYSEEALYFILNQILILLLRNSTETAKPEKQSRITSIIHYLHE 167 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 NY +T+N++AE L+ Y F++ T+ QYI ++R+ H + L +TDKS+ +I Sbjct: 168 NYTYPITLNELAEQFYLSPYYLCREFKKYTNSTIVQYINSLRVGHAQRLFMETDKSVTEI 227 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR-----RQTFPG 302 + GF + + F + G+SP + RK +++R R PG Sbjct: 228 SKIVGFSNVTHFNRVYRSVTGLSPSKSRKQAKERSAAMERHGIPG 272 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 94/266 (35%), Gaps = 6/266 (2%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 ++ P HWH + E+ DG+ + + + + + H + Sbjct: 24 VDHTHPQYEMPFHWHIEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKLHGGSPKDC 83 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 +F+ + S+ D L + I + + + + S E Sbjct: 84 TYECIVFDFNILRQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFDAIRSEEEGY 143 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 E+ ++ + + S+ A + L I +Y + LT Sbjct: 144 ------ELSILGSLLLFFAALQKNEYYSKEEEYDLKSQKAIEQLKASLELIVTDYAKPLT 197 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 + +++ L+ Y FQ T Y+ RI +S ++ ++ DIA GF Sbjct: 198 LQELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRCGFN 257 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQQ 295 S F TF KY G++P++Y+ + ++ Sbjct: 258 DFSYFIKTFKKYKGITPKKYQMMWKE 283 >UniRef50_Q7CUK1 Transcriptional regulator, AraC family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CUK1_AGRT5 Length = 297 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 101/285 (35%), Gaps = 9/285 (3%) Query: 19 LSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWA 78 +S+ ++ + + R P H+H + E+ + + + + N G + L Sbjct: 8 VSVPADRSWLLFDRRLPEFPFNWHYHPEFELTLTLNSAGMRFVGDSVENYGDGDLVLLGP 67 Query: 79 CTPHQLTDTG-----TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPF 133 PH G + ++ +T +V + F Sbjct: 68 NLPHAWQSHGLINAPGVHRAVVCWFTRDWIEGLIALTPELSAITPLLV----ESGHGICF 123 Query: 134 EVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV 193 + + +I +L ++ S + + + Sbjct: 124 GEDALAKVGERLATLHKIAPEQQILTLLGVLVDLARVSDRRPLSAGEVTASTAPRDRARM 183 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 ++L I +Y ++I ++E L+ + +F+R ++T+ QYI +R+ LL+ Sbjct: 184 QRVLNHIHAHYIGTISIKPLSEIAHLSDSQLQRLFKRSTRMTISQYIGQLRVGGACRLLA 243 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 TD S+ IA GF ++ F F GM+P YR+ Q ++ Sbjct: 244 QTDLSLARIAEETGFSDAAHFSRQFRAARGMTPGDYRRQFDQTQR 288 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 98/266 (36%), Gaps = 14/266 (5%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQ--LTDTGTCQSMAIFNLP 99 H H ++ G + + + I +G I + T H ++ + +P Sbjct: 47 HCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFMP 106 Query: 100 M---HLFLSWPLDKDLINHVTHGMVIKS-------LATQQLSPFEVRRWQQELNSPNEQI 149 F P D + ++ + ++ VR +++ E Sbjct: 107 SFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDM--LIEYE 164 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 R+ +I L K L VN S + +++++ I +Y + + Sbjct: 165 RRTPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMN 224 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 +ND+ L+ + +F+ T +Y+T +RI +L + S+ D+ + GF Sbjct: 225 LNDLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFN 284 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQQ 295 S F F KY G+SP +RK + + Sbjct: 285 ELSYFCRIFKKYTGISPTDFRKQAMK 310 >UniRef50_UPI00019737F8 L-rhamnose operon transcriptional activator n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019737F8 Length = 305 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 104/293 (35%), Gaps = 10/293 (3%) Query: 9 SSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNI 68 S +EK L + E+++ HWH +E+ G+++Y ++ Sbjct: 13 SKEEKLPYRTLDFPYTASQAELDYYRERF-VPWHWHRAIELFYIESGEIQYCTPHKTAVF 71 Query: 69 NQGHITLFWACTPHQ--LTDTGTCQSMAIFNLPMHLF---LSWPLDKDLINHVTHGMVIK 123 G + + H + I L +++ I + I+ Sbjct: 72 PAGTAGMVNSNVLHMTKIRSHREKNIQLIHIFDPKLLAGGQGSLIEQKYITPLITAPQIE 131 Query: 124 SLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKN 183 LA P + + R + ++ W + + N Sbjct: 132 ILALYPDQPEQSALIDSIRGAFLLAERDFG---YEINIREALSKIWVQLCKISFALLQDN 188 Query: 184 SVSRHAQ-FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITA 242 + V QM+ ++ E+Y + ++I ++A V L+ FQ + +T +YI + Sbjct: 189 PQRENRTADKVKQMMVYVHEHYTEKISIPELAGCVFLSERECYRAFQNCLHMTPAEYIKS 248 Query: 243 MRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 R+ +L+D+ I + G ++S F F ++ G +P QYR+ Q Sbjct: 249 YRLQMACQILADSQMPITEAGYACGLGNASYFGKVFREFAGCTPLQYRRRWQN 301 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 110/287 (38%), Gaps = 4/287 (1%) Query: 10 SDEKQTRSPLSLYSEYQRMEIE-FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNI 68 +E + + L Y + HWH +E+N G Y+IN +K Sbjct: 6 REEAIPKEKVILAKNYPIFVADTIGVTSPYQKLHWHNVLEINYIKSGMGYYIINGQKFEF 65 Query: 69 NQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTH--GMVIKSLA 126 QG + L + H +T I + D +L + + + Sbjct: 66 QQGDVLLINSNDLHCAYETKDLVMTVISFDSTWFIHNLRFDPELFSPFREMGKHYMNLIP 125 Query: 127 TQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVS 186 + ++R EL + ++ + +L +F + + + S+S Sbjct: 126 RDHPAMGKLRSLLFELQEEHVGEQRSYATVVYSLLLQFLATVNRQCRIEG-EGGSEPSIS 184 Query: 187 RHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRIN 246 + Q++ + +N+ T+ ++A V L+ + IF+R + + Y+ +R+ Sbjct: 185 ERQLEKMRQVIMVMEQNFAHPWTLEELASLVYLSPSRFSEIFKRAVGMPPLLYLIHIRLE 244 Query: 247 HVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 +L ++D+AL GFR+ + F F K++GM+P+ +K Sbjct: 245 QAVTMLEGGHMKVMDVALECGFRTLTNFNRLFKKHIGMTPKASQKQH 291 >UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=Clostridium RepID=A5I5L7_CLOBH Length = 688 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 97/262 (37%), Gaps = 4/262 (1%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP 99 HWH +EV +G ++ I E +N+ I + H + + IF + Sbjct: 25 PIHWHNAMEVIYVLEGSIKITIETESHRVNKQEIGIINPEEAHSIKSITNNNKVLIFQID 84 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGL 159 F + D+ N + A + +R++ L Q D + Sbjct: 85 TSFFNKYY---DIENMFFYTDFSAPEAQKHEKYDVLRKYLSTLLCEIAQKGDNYEDVVEE 141 Query: 160 MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 +L + Y +++ +I NY+ ++I D+A L Sbjct: 142 ILVDLLYHLINNFHYLIYDEEELKENEVQFERY-DRIIKYIYSNYNNKISIQDIARLEFL 200 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 +++Y + + + ++ R+ LL DTDK+I +I+ GF + F F Sbjct: 201 SSHYLSNEMKNKVGYSFNDFVNLTRVEEAIKLLLDTDKTISEISEELGFSHTRYFNKHFK 260 Query: 280 KYVGMSPQQYRKLSQQRRQTFP 301 K+ +P QYRK + +T+ Sbjct: 261 KHYKCTPMQYRKKYKVDEETYE 282 >UniRef50_B9JPZ9 Transcriptional regulator (AraC/XylS family) n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JPZ9_AGRRK Length = 312 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 98/289 (33%), Gaps = 9/289 (3%) Query: 16 RSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITL 75 + + P + ++H + E+++ + + + G +T+ Sbjct: 24 FEQILTTEHDTFLWRIDDYPWVRSLWNFHPEFEIHLIRKSSGTAYVGDYIGDFGPGDLTV 83 Query: 76 FWACTPHQL-----TDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL 130 + PH D + I + Q+ Sbjct: 84 IGSNLPHDWVSHIGKDDKIPGRDLVVQFDPDKLRQASQHLPEIKRLNS----LLTTAQRG 139 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 F Q+ + + ++ + L+ L +S +V Sbjct: 140 LRFSGATAQRAAHLLETIGKFDGLERLIRFLRVLELLADSKECDVLSSPEFAPNVDAITL 199 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 + + + I ++ + + + DVA ++ N F + + Y+ ++RI Sbjct: 200 NTMQRAILHINSHFTEKIQLPDVAAVANMSTNRFSRFFIKNTGRSFTDYVVSLRIGRACR 259 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQT 299 LLS++DK ++DI G+ + S F +F ++VG SP YR+ + +R + Sbjct: 260 LLSESDKPVIDICYEVGYTNLSNFNRSFLRHVGKSPSAYRRAAHGKRVS 308 >UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4N0_RUMHA Length = 275 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 86/256 (33%), Gaps = 16/256 (6%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNL 98 HWH ++E+ G +N E+ I + + H + A+ Sbjct: 35 VPHHWHDEMEILYFSKGSYTLFVNMEQFQIEEKCFYFIYPGELHAIVPHSDSTESALVFH 94 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 P L + L + +++E Q D + Sbjct: 95 PSLLGFEYKLFPQCLKPSNPAFSP---------------FEKEYRKVFHIFHQFPEDSLS 139 Query: 159 LMLKRFS-LSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 L S + IL S + + L F+ +Y + L I D+A V Sbjct: 140 ARLFIQSGIFKMAGILSTFPSLLQTERKTDMRIETIKTALDFLHSHYQEKLYIRDLALQV 199 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 +N Y F++V+ + Y+ RI LL TD I+++ + GF F Sbjct: 200 NMNEQYFCRFFKKVLGKSPITYLNEYRIKQACILLQTTDLPIMEVGMDCGFFHLGNFMKE 259 Query: 278 FGKYVGMSPQQYRKLS 293 F KY +P QYRK S Sbjct: 260 FKKYTETTPLQYRKKS 275 >UniRef50_C9LA37 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LA37_RUMHA Length = 326 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 94/297 (31%), Gaps = 5/297 (1%) Query: 3 TDTFMCSSDEKQTRSPLSL-YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLI 61 + Q +P Y +Q + E HWH + E G + Sbjct: 18 KSEIIMYKINIQEENPHGTPYFPFQALSQEDFCGQYFAPYHWHEETEFIYITKGSLMLRT 77 Query: 62 NNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLD---KDLINHVTH 118 + +G++ H + PM D +L+ + Sbjct: 78 ETNSQLLTEGNVYFINPGMVHGIFGHSEVSHHYALLFPMSFLSFSQYDICQNELLTPLLS 137 Query: 119 GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTS 178 ++ + ++ + + + + + + S Sbjct: 138 KKLLFPEGSSLSLEISLQIGSLISKAARLYLEDTSANTALSIKIILLQILEILFQEHAFS 197 Query: 179 RTHKNSVSRH-AQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMK 237 K+ + + + +I ++Y + +T+ +AE + LN NY F+ + T Sbjct: 198 SAQKHEAEKDFENHSLKSVFSYIEKHYMEPVTLEALAECIPLNKNYFCKFFKEKVGKTPF 257 Query: 238 QYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 Y+ RIN A L T I ++AL G+ + S F F Y +P +R ++ Sbjct: 258 AYLNEYRINQAAAQLLKTTAPITEVALNNGYENISYFVRQFKHYKHCTPSDFRTSAK 314 >UniRef50_C6J603 Transcriptional regulator n=5 Tax=Bacilli RepID=C6J603_9BACL Length = 288 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 105/276 (38%), Gaps = 6/276 (2%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 + + + HWH ++E+ G V + E V + +G I F + Sbjct: 10 FQDSILFRTFLNDGMTIVYPHWHKEIEIIYSRKGKVNIGVREEIVQLEEGEIFFFPSGEA 69 Query: 82 HQLTDTGTCQSMAIFNLPMHLFLSWPL---DKDLINHVTHGMVIKSLATQQLSPFEVRRW 138 H + + ++ + LF L + L+N G + Q L+ Sbjct: 70 HYFLASPESERY-VYQFNLKLFDERTLRISEDSLLNLFETGEPLSRNWPQGLAQKATELL 128 Query: 139 QQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ--FYVSQM 196 + + +G + + ++ K S +H + ++Q+ Sbjct: 129 IHLYEVEQTKPMGMNYLTLGYLYQLIGEFYLHLPRRQTSNLPSKRSTIQHKETLDLLNQV 188 Query: 197 LGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTD 256 ++ Y + +T+ DVA+ V + Y F+ T Q++T RIN + +L++ + Sbjct: 189 FEYVENRYREVITLEDVAKFVGFSPYYFTRFFKANTGQTFMQFLTEYRINQAKFILANEN 248 Query: 257 KSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 + ++A AGF S F+ F VG SP QYRK Sbjct: 249 IPMAEVADKAGFASVKTFHHVFKDEVGQSPLQYRKN 284 >UniRef50_B8I274 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I274_CLOCE Length = 276 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 110/261 (42%), Gaps = 9/261 (3%) Query: 32 FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ 91 FR + H H Q+E+ DG++E +N + +G +++ + + H + Sbjct: 15 FRENSLDFLPHLHAQLELLYVEDGEIEITVNGCTRLLKKGDLSVSFPNSVHSYNTPPHQE 74 Query: 92 SMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQ 151 M + ++L L+ L+ I S + P+ + +E N + Sbjct: 75 RMNCIVVILNLILAGDFINTLLKFHPKVPFISSDNLHKDVPYAINTLYEEYNYAQSKPVY 134 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 I + + + L ++ N + + ++ +I ENY Q +++N Sbjct: 135 TPICKAYIQIIISRLLQQMELITN---------TDVNYFDIIFDIINYINENYMQPISLN 185 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 D++ + + +Y +F ++++ YI +R++ +L +T+K+I IA GF+S Sbjct: 186 DMSRALGVGKHYLSRVFSDKIKISFSDYINGIRVSWACNMLLNTNKNITQIAYDCGFQSI 245 Query: 272 SRFYSTFGKYVGMSPQQYRKL 292 F F K +SP ++RK Sbjct: 246 RTFNRAFHKACHVSPSKFRKS 266 >UniRef50_B3CFD8 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=B3CFD8_9BACE Length = 323 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 95/280 (33%), Gaps = 4/280 (1%) Query: 15 TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHIT 74 L + + H+H Q E+ + + + + G + Sbjct: 39 INEKLPISESNPIKARHYDYDRFTYPWHFHSQYEIIYVKESHGLCFVGDCIEKFSAGDVI 98 Query: 75 LFWACTPHQLTDTG----TCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL 130 LF PH + + + + ++ + + +++ Sbjct: 99 LFGTNLPHYMRSNDIYGSENATSRVQGTIIQFEQNFMQYSFDYYPQFLQIKMLLEESKRG 158 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 F + + + + +I +L P S + Sbjct: 159 IIFPKQDATRVGELLSGFLLLSGFHQISGLLDLLQELAVSPQRKTLASLHYYEKFPTLGN 218 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 + +++ FI NY + L +N++A +N++ F+ T+ QY+ MR+ + Sbjct: 219 KRIDKIISFINNNYTRNLKLNEIAGMASMNSSAFCRYFKENTGKTLLQYVMEMRVGYACK 278 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 LL+ + I IA+ GF S + F TF + V ++P QYR Sbjct: 279 LLALGEMDISQIAVECGFDSITHFNRTFKQLVNLTPTQYR 318 >UniRef50_C5ETS2 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETS2_9FIRM Length = 311 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 94/270 (34%), Gaps = 2/270 (0%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 ME + + HWH +VE+ G VEY I KV G + + H Sbjct: 35 MEFDIQKAGRFVPWHWHKEVELFYVESGVVEYYIPKGKVVFPAGSGGMVNSNVLHMTKSK 94 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 + + N + L I + + +S ++ Q + Sbjct: 95 DSAANTIQLNHIFDVSLIGGSQGSRIEKKFILPLTTASHIGIISLDPNQQEQDAILKDIR 154 Query: 148 QIRQLAIDEI--GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 + Q++ E + L+ W I + + + M+ +I E++ Sbjct: 155 KSFQISSGEYAYEIKLRSALSDIWARIFALSSPLLKEGRDKDKTDDKLKLMIIYIQEHFW 214 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 +++ D+A ++ F + T Y+ R+ +L+ ++ ++ Sbjct: 215 DKVSVKDIASAAFISERECYRTFSECLHTTPLGYLRNYRLQQACRMLTQGQDAVTAVSHA 274 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 G SSS F S F + G SP +YRK Q Sbjct: 275 CGLGSSSYFGSVFKENFGCSPMEYRKRWQN 304 >UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQS2_9FIRM Length = 291 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 92/254 (36%), Gaps = 2/254 (0%) Query: 39 PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNL 98 HWH E+ P + +E + + I + H +T + I N Sbjct: 31 FPLHWHVPGEIICPIQNTYNVTVADEILYLKPHDILFIGSGELHSITAPKEGERY-ILNF 89 Query: 99 PMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIG 158 +F + + +++ Q + + + + Sbjct: 90 STAMFEQFHELALFFAALHPFRLLRYQDQPQFNDQLLALMTRMEKEYFGAAVFRDCELSS 149 Query: 159 LMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 LML F++ G + N + Q S + +I + + L+++++A Sbjct: 150 LMLHFFAVIG-RKLHQNAPHENISPLRQKEQQERFSMLCNYINAHCTEDLSLDELANEAG 208 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 + + +F+ + T Y+ R+ + LL+D I ++A+ +GF S + F F Sbjct: 209 FSKYHFARLFKEITGTTCHNYLLGRRLLFAKTLLADFSLPITEVAMRSGFNSLATFNRIF 268 Query: 279 GKYVGMSPQQYRKL 292 +G +P ++RKL Sbjct: 269 KFQIGCTPSEFRKL 282 >UniRef50_A1ZWA4 Activator protein MtlR n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWA4_9SPHI Length = 290 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 95/279 (34%), Gaps = 8/279 (2%) Query: 25 YQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQL 84 Y + P H+H ++E+ G + N G + PH Sbjct: 14 YSFRVLYLDQPLFTYPFHFHEELELTWIIQGSGTRYVGNHITTFTDGDLVFLGEKVPHAW 73 Query: 85 TDTGTC----QSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQ 140 + + + ++ + + + QQ F+ Sbjct: 74 ISYDEDVKHNTKAVVLQFRKDFLGNAFWNTPEVDEIKKMIHLS----QQGIHFQGDILNI 129 Query: 141 ELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFI 200 N ++ ID + +LK + + + +++ FI Sbjct: 130 LRNDLLTLGKKQGIDRLNGVLKILDTLATWKHYTPLINDEVNINYMTTDFERIEKVMNFI 189 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 +N+ + ++ +AE ++++ ++ T+ + + +R+ + LL TDK+I Sbjct: 190 YQNFRSDIKLSKIAEIANMSSSAFCHFLKKRTHKTLSRILNEIRLGYASQLLIKTDKNIS 249 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQT 299 +IA +G+ S S F F SP+ YR +++ + Sbjct: 250 EIAYESGYNSISYFNKAFKDIYECSPKTYRVEIKKKSRV 288 >UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP25_9FIRM Length = 300 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 114/296 (38%), Gaps = 12/296 (4%) Query: 4 DTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPT---SHWHGQVEVNVPFDGDVEYL 60 ++ +T +EY HWH ++E G+V + Sbjct: 8 TKTTTDANLMETVHHG--SAEYPFRYYYENIALFDFKCIDWHWHSELEFIYIESGNVVFD 65 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM 120 I +N+G+ + + H+L + I N P D + + + Sbjct: 66 IGTVHFELNEGNGIMINSKILHRLQSSSD---AIIPNFLFQPSFIAPQDSLIYKKYINPV 122 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI--GLMLKRFSLSGWEPILVNKTS 178 + SL P WQ++ + I + E +++ W +L N T Sbjct: 123 ISSSLEYLVFQPDI--PWQKKALEIIKTIIAVQETEFNREIIVSMSVQQLWILLLENLTF 180 Query: 179 RTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQ 238 +N + ++ + M+ ++ +Y + +T+ D+A ++ + A+ +FQ ++LT + Sbjct: 181 DQFENMGAVISRTRLQLMMQYVHAHYSENITLEDIARTANISKSTALHLFQNNLKLTPVK 240 Query: 239 YITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 Y+ R+ LL +T++ I I+ GF + F TF K M+P YR + Sbjct: 241 YLINYRLTQAALLLINTEEKIATISNNTGFNNVDHFCRTFKKTYKMTPTDYRNQER 296 >UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZJ5_9BACL Length = 310 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 98/277 (35%), Gaps = 17/277 (6%) Query: 22 YSEYQRMEIE-----FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLF 76 + + +++ E +++ +I H+H ++E G + +N E + QG + + Sbjct: 40 FYQNWKLDPELPMDIYQSTNITFYPHFHAEIEFIYVLSGTIRIGVNEEIRLLRQGDMVIC 99 Query: 77 WACTPHQLTDTGTCQSMAIFNLPMHLFL---SWPLDKDLINHVTHGMVIKSLATQQLSPF 133 + H + I SWP D + Sbjct: 100 GSNDIHYFDSRELESEIIILICKPEWITMTKSWPSDFRFASPYIPAGTP--------GLE 151 Query: 134 EVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV 193 V+ EL ++ + + + + S + RT K + Sbjct: 152 TVKTILDELIREKDEKKPGYPLLLKAGILKLCGSLQRAVDTLPMDRTTKEKYESRR-ARM 210 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 Q+L +I ++Y + L + +A+ + ++ F+ + + K Y+ +R+ L Sbjct: 211 QQILSYIEDHYREELNVKVMAKRFSMEPSHFSRSFKAAIGMNFKTYLNTVRVLSAEHQLL 270 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 +D SI++IAL GF S F F + G P R Sbjct: 271 TSDLSIMEIALECGFSSIRTFNRVFKELRGTVPSSLR 307 >UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=B0P341_9CLOT Length = 282 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 122/285 (42%), Gaps = 15/285 (5%) Query: 14 QTRSPLSLYSEYQRME---IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQ 70 + + L + +E + E R + + HWH +E+ F G + + +N+++ + Sbjct: 3 EIQHELIMTNEDLPFKMFLFEGRDGNYIREKHWHRSIEIFAVFQGTLGFYLNDQEYLLEC 62 Query: 71 GHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQL 130 G + + H + + +P+++F + I H + ++ Sbjct: 63 GDFIIVNSNEVHSIHAPKE-NMTVVLQMPLNMFEKYYTGDQFIC-FAHAPQAQDEQLMEM 120 Query: 131 SPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQ 190 + + + +I+ L D + LM+ R+ P ++++ + K SV Sbjct: 121 ICEMYMAYSDKHCGYDLKIQSLFYDMLYLMVTRYREINVHPDILHQHKQLTKLSV----- 175 Query: 191 FYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA 250 + ++ E+Y + L+++ +AE + +Y +FQ+ + K Y+ A+R H Sbjct: 176 -----ITDYMKEHYKEELSLSKLAEIFGYSPSYLSRMFQKYAGINYKDYMQAIRTEHGYR 230 Query: 251 LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 L +TD +I DI++ GF ++ F F K G+ P ++RK + Sbjct: 231 QLVETDMTISDISMENGFPNNKAFSKAFYKKYGIMPAEFRKRQKN 275 >UniRef50_Q2SE27 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SE27_HAHCH Length = 288 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 1/282 (0%) Query: 13 KQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGH 72 K + + + + H+H + E+ + + + + G Sbjct: 2 KALYEKVRYPEDASWRFFLRQLDELPFQWHYHPEYELTYTLNSAGQRYVGDHVDRYESGD 61 Query: 73 ITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSP 132 + L PH + + + F +D+ L N +G V L + Sbjct: 62 LVLIGPNLPHSWRSSQRPDEDKPHTVYVLWFNQQWVDRLLENFPEYGDVGDILKQSRRGL 121 Query: 133 FEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTH-KNSVSRHAQF 191 + + E L L + S + SR Q Sbjct: 122 TFSPTDHASVERLFTALPTQGPKERLLTLLSLLGGLAQIPHTPLASANFCTGTTSRREQD 181 Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 + +L + LTI D+A ++ + F + M + QY+T +R+ + Sbjct: 182 ILDGILDCAHLAFADKLTIEDMARRHNMSVSKFSRFFSKHMNQSFNQYLTQIRLGQACSK 241 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 L +T I IA GF + S F F K+ G++PQ +RK Sbjct: 242 LINTAAPIALIAEQTGFNNLSNFNRLFKKHKGVTPQGFRKRF 283 >UniRef50_B9Y348 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y348_9FIRM Length = 297 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 98/265 (36%), Gaps = 7/265 (2%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG--TC 90 P+ +HWH +E V G + Y ++ E + +N G + A H C Sbjct: 34 DYPNYTALNHWHEDLEFIVVHSGSMSYNVSGEILTLNSGEGLIVNARQMHYGFSPDRTEC 93 Query: 91 QSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIR 150 + + P L ++LI+ + + + P WQ+E+ I Sbjct: 94 TFLCLLLHPQLLCPLPSFKRNLIDPLIENTAAPFVFLRPEIP-----WQKEIRDHILAIE 148 Query: 151 QLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTI 210 A + ++ +LV V + M+G I + Q LT+ Sbjct: 149 AGADTHSAPLQALSRMAAIGALLVENLPPAVVTDVENPDLRCLKVMVGTIHLRFAQKLTL 208 Query: 211 NDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRS 270 +A + + +F R + T Y+ R+ LL +T S+ +IAL GF S Sbjct: 209 AQIAASGAVGQSKCCKLFMRFLNQTPMAYVNQYRLYQSLELLRNTAMSVTEIALAVGFGS 268 Query: 271 SSRFYSTFGKYVGMSPQQYRKLSQQ 295 +S + F K SP QYRK + Sbjct: 269 ASYYAEAFRKGFDQSPTQYRKEHNR 293 >UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enterococcus casseliflavus RepID=C9A5Y7_ENTCA Length = 279 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 106/293 (36%), Gaps = 22/293 (7%) Query: 7 MCSSDEKQTRSPLSLYSEYQRMEIEFR----APHIMPTSHWHGQVEVNVPFDGDVEYLIN 62 M K+ + + I R HWH ++++ +G Y I+ Sbjct: 1 MYFKRTKENEETTKHTTTNRSFAIYQRCLQQKRGDQLPLHWHDELQIVWVEEGSFVYTID 60 Query: 63 NEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVI 122 +E++ +N+ + + H F+ F++ P+ K+ I + H Sbjct: 61 DEQILLNKNETIIINSRVLHGAVLASENVRYCCFDF-SSGFIADPVFKEAIEQLVHDRTR 119 Query: 123 KSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHK 182 + + L EQ L + + + + Sbjct: 120 SYRRLTLTAQHQAFVQTVRLPLLIEQRFTLYELFLAALSQLMA----------------- 162 Query: 183 NSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITA 242 + + + ML F+ E+Y + LT+ +A+ +N +F++ LT Y+ Sbjct: 163 ARPASPKKETIYLMLAFVHEHYQEPLTVPAIAKAAAINTRTCTALFRQYTTLTPINYLID 222 Query: 243 MRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 R++ + LL +T++ I I GF S F F + G++P QYRK ++ Sbjct: 223 YRLSQAKNLLIETEEPISTICYHVGFNHLSYFSKRFQRKFGLTPLQYRKTYRE 275 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 99/257 (38%), Gaps = 6/257 (2%) Query: 36 HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAI 95 HWH ++V +G N + NI QG + + + H L + Sbjct: 30 GTNFKEHWHEHLQVFYFINGKGFLRCNTKSFNIIQGDVIIINSRDLHYLESLNNDLRFYL 89 Query: 96 FNLPMHLFLSWPLD---KDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQL 152 + + S +D ++ ++ +++ + E+ R + + + Sbjct: 90 IRIDLPFLFSDQVDLCQTKYLSPLSENLILFKNLIRNDD--EIVRCIKTIIKEYNKKEIG 147 Query: 153 AIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIND 212 + L + ++K + + + ++ F+ N+++ ++ + Sbjct: 148 YELAVKANLYNLVVLLIRN-YIDKFVTKRQLAFKINNDERFYKVFEFVHSNFNKKISTLN 206 Query: 213 VAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSS 272 ++ ++ Y IF+++ T +YI +R+ LL +++ +I ++A+ GF + Sbjct: 207 LSNIAHVSPYYFCRIFKQITGKTTTEYINEVRLKKSIELLKNSNMNITEVAINCGFNDVN 266 Query: 273 RFYSTFGKYVGMSPQQY 289 F F K G+SP ++ Sbjct: 267 YFSRLFKKKYGVSPTKF 283 >UniRef50_C6VY23 Transcriptional regulator, AraC family n=2 Tax=Sphingobacteriales RepID=C6VY23_DYAFD Length = 302 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 102/274 (37%), Gaps = 5/274 (1%) Query: 27 RMEIEFRAP-HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLT 85 I + H+H ++E+ G + + + G + L PH Sbjct: 15 SFSIRRDVVLYFYNRWHYHPELELIHIEQGSGTQFVGDNIRSFQSGDLLLIGPNLPHYWR 74 Query: 86 DTGTC---QSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQEL 142 S + F L K+ ++ + + L +L + ++ Sbjct: 75 CDEKYFQRGSQLYAQATVVHFSEEMLGKNFLSLPENKSIHDLLVKARLGLKILGEGTDKV 134 Query: 143 NSPNEQIRQLAI-DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIA 201 + + + I +L+ + ++ ++N ++ ++Q+ + Sbjct: 135 KALLHDLLNQTNGNSIIGLLQILETLAHCEDINVLSNTQYQNEYDQYDTDRINQIYQYSI 194 Query: 202 ENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILD 261 N+ + ++I ++AE ++ + F+ + T Q++ +RI H LLS++ + Sbjct: 195 SNFQKKISIEEIAEVANISPHSFCRYFKSRSRKTYSQFLLELRIGHACKLLSESRIPVAQ 254 Query: 262 IALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 + +GF + + F F + G SP QY+K ++ Sbjct: 255 VCFESGFHNFANFNKYFKLHTGKSPMQYQKEFRK 288 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 91/261 (34%), Gaps = 6/261 (2%) Query: 38 MPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFN 97 HWH ++V G + + + + H L T Sbjct: 30 NFPRHWHEHLQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELHYLESTSDNLVFYTIR 89 Query: 98 LPMHLFLSWPLD---KDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAI 154 S +D + +T + + Q + E+ +++ + Sbjct: 90 FEPSFLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNT--ELTELVKKVLMEYFNKKIGYE 147 Query: 155 DEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVA 214 I + ++ + + +++ + I + Y++ +T++ +A Sbjct: 148 LAIKGYIYYLVVTLLRNHVQHILTQSELDDKEA-TLIRFQPAFELIEKKYNEKITLSKLA 206 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 V L+ ++ F+++ T YI +R++ L TD +I +IAL GF + + F Sbjct: 207 NTVGLSVHHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNYF 266 Query: 275 YSTFGKYVGMSPQQYRKLSQQ 295 F KY SP QYR L + Sbjct: 267 SRIFKKYHSTSPSQYRNLYKN 287 >UniRef50_B2JDH4 Transcriptional regulator, AraC family n=33 Tax=Proteobacteria RepID=B2JDH4_BURP8 Length = 339 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 97/272 (35%), Gaps = 23/272 (8%) Query: 35 PHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMA 94 P+ H+H + E+++ + + + G++ L PH Sbjct: 24 PYRTVRWHFHPEFEIHLIVATTGKMFVGDYIGPFAPGNLVLMGPNLPHNWVSEVPEGVTI 83 Query: 95 -----IFNLPMHL-------FLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQEL 142 + P F W + L+ G+ + + ++ P Sbjct: 84 EQRNLVVQFPQDFVAHCTQSFPEWRTLEALLADSRRGVSFGAQTSAKIQPLF-------- 135 Query: 143 NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 E + + I L L + S ++ + +A ++ +L +I + Sbjct: 136 ---MELLDARGLRRIVLFLSMMEILLNASDRELLASPAYQIDPTSYASTRINHVLSYIGK 192 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 N L +++A+ + + F+R LT QY+ MRIN LL D + S+ DI Sbjct: 193 NLSSELRESELAQLAGQSVSAFSRYFRRHTGLTFVQYVNRMRINLACQLLMDDELSVTDI 252 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 GF + S F F GM+P ++R+ Q Sbjct: 253 CYKVGFNNLSNFNRQFLTAKGMAPSKFRRFQQ 284 >UniRef50_A5MLM9 Transcriptional regulator, AraC family (Arabinose-binding/dimerisation), putative n=1 Tax=Streptococcus pneumoniae SP19-BS75 RepID=A5MLM9_STRPN Length = 293 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 93/253 (36%), Gaps = 3/253 (1%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSM---AIFN 97 HWH +E+ +G + I+ + N +G I L H + F Sbjct: 36 FHWHTDMEIIYVHEGQARFHIDTDYFNSEKGDIILIRPNALHSIHPIENTYHYMDAINFQ 95 Query: 98 LPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 L + + + H + + + + +Q L + E Sbjct: 96 LDLIGYSTKDFAAIHYLHPLYNGQLDFKRVIKPNQPGYTEIRQTLINSMEIGYYRKTFFE 155 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHV 217 + N + ++ + + +++ +I+E+Y + L+IN +AE Sbjct: 156 LELKSELLKLLHLLFQYNYVYSSKQSIDGYRREEKIRKIIDYISEHYQEDLSINLLAELC 215 Query: 218 KLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYST 277 + + M F++ + ++ Y+ R+ LL + S+L+IA + GF + S F Sbjct: 216 GYSPTHFMNFFKKNLGVSCMDYLIHYRLRKATELLQHSTLSVLEIASSVGFSNLSNFNRQ 275 Query: 278 FGKYVGMSPQQYR 290 F K P++YR Sbjct: 276 FKKIYKTIPRKYR 288 >UniRef50_B4CY94 Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CY94_9BACT Length = 307 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 96/297 (32%), Gaps = 17/297 (5%) Query: 11 DEKQTRSPLSLYSEYQRMEIEFRAP-HIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNIN 69 +Q + S + E H+H +V++ + ++ + + Sbjct: 3 SARQPILETTPQSSRESFHCEVVKGSGYGARWHFHPEVQLTLVMKSAGYRIVGDNIAPLV 62 Query: 70 QGHITLFWACTPHQLTDTGTCQSM----------------AIFNLPMHLFLSWPLDKDLI 113 G + A PH A+ + + + D L Sbjct: 63 PGDLVFVGANLPHVWHQEEGNAECGMRNVESGARKKERTDAVHAIVVRFREDFLGDHFLQ 122 Query: 114 NHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPIL 173 + + + + + S E + + +L+ + L Sbjct: 123 SPEMEAVRRLLKRSARGLQVTGVTREVVARSMQELADSQGLGRLLKLLEIVNALAASKHL 182 Query: 174 VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQ 233 S + + +++ +I E+ D+ + +VA L+ F+ Sbjct: 183 HPIASANFSPELRDSDTPRMQRVMRYIHEHLDEVIEREEVARCAALSEGAFSRFFKTRTG 242 Query: 234 LTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 T+ QYI +R+ + A L D + + DIAL GF + + F F GMSP++YR Sbjct: 243 KTLPQYINELRVGNACARLRDAEAKVADIALACGFENLANFNRQFRAITGMSPREYR 299 >UniRef50_C0D9W5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9W5_9CLOT Length = 316 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 118/301 (39%), Gaps = 24/301 (7%) Query: 5 TFMCSSDEKQTRS--------PLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGD 56 F+ S++EKQ P+S+Y+++ A HWHG+++V +G Sbjct: 14 EFVISTNEKQQEEVRFLSGDFPVSVYTQHY-----RYAASDYVPLHWHGELQVLWIAEGA 68 Query: 57 VEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHV 116 +EY +N + + L H G N +F + ++ + Sbjct: 69 LEYSVNGRHFVLGPDKLLLVNRRQLHGSRTMGGDSRTLCINFTPDIFHPLIRENYVLPLL 128 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNK 176 SL L P++ + + LN E ++ ++ ++ L Sbjct: 129 QSDSFTHSLLL--LLPYQTEKLKTFLNWKCEPLQYFSVINFLSLVFEDIL---------G 177 Query: 177 TSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTM 236 +S KN + + M+ F+ +Y + LT+ ++ + N N +F++ L+ Sbjct: 178 SSENTKNPQNYEEIKLIQTMIRFVQTHYAEPLTVRQISAYAITNKNRCTALFRKYTGLSP 237 Query: 237 KQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 +Y+ R+ + ++ +DK I +I+ G+ S F F G+ P +YR +R Sbjct: 238 IKYLNEYRLYTAKNMIVSSDKPISEISSDVGYNQISYFIEQFRGSYGLPPLKYRNQFGRR 297 Query: 297 R 297 + Sbjct: 298 Q 298 >UniRef50_A9E4Z4 tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Kordia algicida OT-1 RepID=A9E4Z4_9FLAO Length = 288 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 93/267 (34%), Gaps = 10/267 (3%) Query: 31 EFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT--- 87 E R H H +++++ G ++I + + + LF + PH L Sbjct: 20 EDRGRTFYEQLHQHEEIQLSYIVSGKGTFIIGDTIRDFQPNDVLLFGSNVPHVLKSDVTT 79 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 M F + + + L + + + S E Sbjct: 80 DEDSYMISLFFTHDSFGEHFFMLPKLQQL------QKLLNDARFGVKFTKHSTIVKSLFE 133 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 + + +S + + + +S + F+ ++DQ Sbjct: 134 GVLHQNSLQQFATFFEILSVLTPSDYETVSSFINTKNYTDDEGKRMSAVFEFVMNHFDQK 193 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTD-KSILDIALTA 266 + + D+A + N F++ T +++T +RI + L+++ SI +IA + Sbjct: 194 IILEDIATVANMTPNAFCKYFKQRTNKTFFRFLTEVRIENACKFLTNSSQLSIAEIAYSC 253 Query: 267 GFRSSSRFYSTFGKYVGMSPQQYRKLS 293 GF + S F F + G++P ++RK Sbjct: 254 GFFNVSNFNRKFKEIKGLTPTKFRKSY 280 >UniRef50_Q9S309 Putative AraC-type Regulator n=1 Tax=Ruminococcus flavefaciens RepID=Q9S309_RUMFL Length = 282 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 100/270 (37%), Gaps = 4/270 (1%) Query: 21 LYSEYQRMEIEFRAPHIM-PTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWAC 79 + E QR + + I +HWH VEV +P ++N+ I + Sbjct: 12 VEYENQRFVMLYDNDEIEEYPTHWHNAVEVIIPLHNGFTVTAGGVDYHLNEKEIIIIPPG 71 Query: 80 TPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQ 139 H + IF + P + ++ + I +++L R+ Sbjct: 72 ELHSMPAQEG--RRIIFQCDNSIISDVPALEAIVPVFSEAFHITPTISKELYILS-RKSI 128 Query: 140 QELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGF 199 ++ S L+ I L L + S E L R S ++ + Sbjct: 129 LDIYSEYYSKSSLSDVRIYLCLIKMLTSVREYQLTQAADAFSGELGGRDDTRKFSMVMKY 188 Query: 200 IAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSI 259 I +NY + + +A + + IF++ ++ QYI + RI LL D + S+ Sbjct: 189 INQNYMYEIPLEKIASIAGYSKYHFSRIFKKYNNVSYIQYINSKRIKAAERLLIDPNLSV 248 Query: 260 LDIALTAGFRSSSRFYSTFGKYVGMSPQQY 289 ++A+ AGF S + F F K +P ++ Sbjct: 249 TEVAMRAGFASLTTFNRAFKKAKNCTPTEF 278 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 91/262 (34%), Gaps = 15/262 (5%) Query: 41 SHWHGQ-VEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP 99 H H E+ + G + I+ + G + F + H T + + + Sbjct: 1 MHQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSCLGV- 59 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGL 159 L +++ + + + Q L Sbjct: 60 SDFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDAP-----------C 108 Query: 160 MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 +L + + + + + + + +I +Y +++T+ +A + Sbjct: 109 VLDQLTCAILCKLDEELARHGQPPRPQQESLGL--TVKAYIDAHYRESITLQSIAAELNF 166 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 N Y F+ + + QYI RI + LL TD+SI +IA + G+ +S+ F S F Sbjct: 167 NPYYLAHAFREHIGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFK 226 Query: 280 KYVGMSPQQYRKLSQQRRQTFP 301 + VGM+P QYR+ Q Sbjct: 227 RLVGMTPGQYRRDWVQNALPQT 248 >UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM6_9CLOT Length = 383 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 102/284 (35%), Gaps = 10/284 (3%) Query: 23 SEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPH 82 SEY + +E H H H + F G+ E+ + QG I H Sbjct: 97 SEYHNITLESIRTHFETGLHTHEYFVITYVFRGECYCYFGGEEFHFKQGDIWFLNTQVSH 156 Query: 83 QLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQEL 142 +L G + L F S LDK N + S+ + +P ++ +EL Sbjct: 157 KLLLPGDDCVVFHICLRQTSFCSVLLDKIKNNEQFVHFFVNSIFDEDNNPCLMQFHIREL 216 Query: 143 NSPNEQIRQLAIDEIGLMLKRF---------SLSGWEPILVNKTSRTHKNSVSRHAQFYV 193 + + ++ + + L E + + R + Sbjct: 217 SVAQYYLFKMLEEYYDQKMHSQEVIAYLFCCLLIQLERNCEAEAVEQEAHRNGRQKNLDI 276 Query: 194 SQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLS 253 S+++ ++ E+ Q +T+ A H Y QR T +++ +R+ +L Sbjct: 277 SEVIAYLMEH-QQTVTLQQAASHFHYVPAYLSRFIQRHTGKTFLEFLNGIRLERAAEMLR 335 Query: 254 DTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRR 297 +T I I+ G+ S F +F + M+P++YR ++ + Sbjct: 336 NTTLPIRQISHMVGYSDRSSFDRSFKRQYHMTPRKYRDNGRESQ 379 >UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I9A5_CLOCE Length = 289 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 104/286 (36%), Gaps = 8/286 (2%) Query: 7 MCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKV 66 + ++ + S + + I+ + HWH E+ G IN Sbjct: 3 LTNASNFEHISFNDITFPFNCFYIK----NSNTLPHWHNHFEMVFSQKGSCMVYINGSSF 58 Query: 67 NINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL--FLSWPLDKDLINHVTHGMVIKS 124 +++ + + + H + G+C AI ++ P +++ Sbjct: 59 LVSENQLIIIPPGSLHSIFPQGSCSYCAIVAGESLFEGLVADPHISEVLTPFMSIGFYPP 118 Query: 125 LATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNS 184 L + + + L ++ + G +K + + + + S K + Sbjct: 119 LHLSEKDRVFKKCFL--LVHELQRENDQKRNGYGARIKSQMIILFSVLQESLPSEFFKKN 176 Query: 185 VSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMR 244 + + L ++ +Y + +T+ND++ + L+ + +F+ T +Y+T R Sbjct: 177 KLPDSTRLIKYSLDYLRIHYSERITVNDMSVYCHLSIQHFSRLFKACTGKTFVEYLTLFR 236 Query: 245 INHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 + R +L TD I I GF +S+ F + KY G P + R Sbjct: 237 LEKARKILIGTDIPITQIPDLVGFCNSNYFCRLYKKYYGHPPSKDR 282 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 104/303 (34%), Gaps = 17/303 (5%) Query: 6 FMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTS---------HWHGQVEVNVPFDGD 56 + +Q Y+ E A + H HG E+ + G Sbjct: 27 EQMRENLRQEVKENGFYNISFNRLKENIAVTMHGPPDPFDAEGLMHNHGYFELVYVYHGS 86 Query: 57 VEYLI-NNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPL----DKD 111 L N E++ +NQG I L H T + L LF L D Sbjct: 87 CVNLFPNQERIVLNQGDILLLNPNALHCPYTTLEDDYIFNIVLKPKLFEKSMLSLLSDNP 146 Query: 112 LINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDE--IGLMLKRFSLSGW 169 L ++ + + + F ++ + I +L E + + + Sbjct: 147 LFSNFFVNYMYRVNKARDYMLFHTNGEKRIAQTMENIITELYSKEMCYRRAAEAELIVLF 206 Query: 170 EPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQ 229 + + V+ ++ ++ EN+ QA T+ VA+H + +Y + + Sbjct: 207 TCLARIYKEQLGLKGFDEVKNKQVTDIITYMDENFSQA-TLQSVADHFGYSTHYLSRMIK 265 Query: 230 RVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQY 289 + + I + ++ + L TD + +IA GF +S F+ F + G SP +Y Sbjct: 266 KHTNKNFSEIIHSFKLENACTYLETTDIPMREIAELVGFNDASYFHKVFKQKYGQSPAEY 325 Query: 290 RKL 292 RK Sbjct: 326 RKQ 328 >UniRef50_D2QF95 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QF95_9SPHI Length = 295 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 93/275 (33%), Gaps = 10/275 (3%) Query: 31 EFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD---- 86 E PH P H+H ++ + G I + G + PH Sbjct: 20 ELVEPHFDPNWHFHPHYQLFLVEKGTGTRFIGDSIKPFGPGDLVFLGPNLPHLWRSDQVY 79 Query: 87 ----TGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEV--RRWQQ 140 + + I + F L D + + L + + R Q Sbjct: 80 FDRQPDSNPAELITRGIVVYFTEDFLGPDFFEKQEMTPLRQLLNQSRQGLEWMGPTRGQA 139 Query: 141 ELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFI 200 E N + + + +L + TS + N+V + + ++ Sbjct: 140 EKALKNLSKQPVGFQRVISLLTLLNDLTLATDFRYLTSPGYTNTVKPAETDRMQLVHDYV 199 Query: 201 AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSIL 260 ++ L+++ VA+ + + F+ T ++++ +RI H LL + +I Sbjct: 200 LGHFPDDLSLDTVADLAGMTSPAFCRYFKARANKTFSEFVSEVRIGHACKLLMNGKLNIT 259 Query: 261 DIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQ 295 I+ +GFR+ S F F G +P Y K ++ Sbjct: 260 QISFESGFRTLSNFNRQFKDITGQTPSGYVKTYRR 294 >UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BH94_9GAMM Length = 305 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 101/261 (38%), Gaps = 20/261 (7%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 H H E G + +N+ + ++ G + A H + Sbjct: 28 HRHQATEALWVLQGAIRVQVNDHQYSLRDGDLLFINADDHHATEAASDDNLVLCLQHRFE 87 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI-RQLAIDEIGLM 160 ++ + T V+K+ + W+Q+ + Q+ + + ++ L+ Sbjct: 88 ELVNVS-----VAPGTSNPVLKARLNDLRTTLAHLWWEQKYQPAHWQLATENGLAQLQLI 142 Query: 161 LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLN 220 L R+ ++ A + + Q+ ++ +Y + +++ ++EH L+ Sbjct: 143 LLRYF----------SSASPAPAESRDDASWRIQQITRYLEAHYREPISLTSLSEHFGLS 192 Query: 221 ANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGK 280 Y F+ T+ +++T +R+ L TD ++ ++AL GF S F S F + Sbjct: 193 ETYLSHYFKDKTGSTLVRWLTQLRLERCLPDLIQTDSTVAELALEHGFPSIKAFNSAFKR 252 Query: 281 YVGMSPQQYRKLSQQRRQTFP 301 +P ++R Q++Q+ P Sbjct: 253 EYQCTPSEFR----QQQQSAP 269 >UniRef50_A7AFT7 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AFT7_9PORP Length = 289 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 92/277 (33%), Gaps = 13/277 (4%) Query: 22 YSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTP 81 R + P H+H ++E+ G +I + +G + L P Sbjct: 14 SCASLRYDYSSLYPKDEMPLHFHPEIEICYVVKGSGYRMIGDFLEPFEEGEVVLVPTNQP 73 Query: 82 HQLT------DTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEV 135 H + + + L + + H L+ Q Sbjct: 74 HCWMYNPESCEPDGKRRCIVVQFNPDLLQTGLSFFTEWEYAAHR-----LSAIQQGILLT 128 Query: 136 RRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSG-WEPILVNKTSRTHKNSVSRHAQFYVS 194 ++ S E++ L E LML R L+ + + + Sbjct: 129 GETAGKIKSCLEEMNLLNASERMLMLIRILQQIGTTTDLIPIGLQETAFNGITKNMQRMQ 188 Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 + ++ E Y + +T++D A + ++ F+R T +I RI V LL + Sbjct: 189 LIFKYVIEYYKEKITLSDAANVISMSTTAFCSFFKRETGKTFTNFINEYRIEAVGTLLRN 248 Query: 255 -TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYR 290 DK I +IA GF F F K M+P+Q+R Sbjct: 249 FPDKDINEIAWQCGFTDIPYFNRYFKKMKQMTPKQWR 285 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 103/261 (39%), Gaps = 9/261 (3%) Query: 40 TSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLP 99 H H E+ + G V +++ +V + QG + + A H L G ++ + Sbjct: 75 APHKHDFFELIYVYQGSVINVVDAHEVVLQQGDLCIMNASAVHTLGKLGKQDTVYNILIK 134 Query: 100 MHLFLSWPL----DKDLINHVTHGMVIKSLATQQLSPFEVRRWQQE----LNSPNEQIRQ 151 LF L + ++I+ + + ++ F + + + Sbjct: 135 PELFNQAFLGLIAENEIISSFFLNSIYQKSISRNFMTFHTQDFPSDDAETYVHRLIMENH 194 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 ++ + + + R +NS VSQ++ +I+++Y + ++I Sbjct: 195 FKDIYYNKSIEISLVGLFIELTRGYKHRQDQNSSIELGMSNVSQIIAYISDHY-KDISIK 253 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 VA+H + NY + ++ T + + +R + L D I +I G+ + Sbjct: 254 QVADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFTAAKEYLQKLDIPINEIVYMVGYTNK 313 Query: 272 SRFYSTFGKYVGMSPQQYRKL 292 S FY TF + +G++P QYRK Sbjct: 314 SHFYRTFKQEMGITPAQYRKQ 334 >UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8S1Q1_9CLOT Length = 322 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 112/299 (37%), Gaps = 16/299 (5%) Query: 1 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL 60 M+ + + SD+ L Q + I + H H VEV G+ ++ Sbjct: 32 MDREDMVIDSDK--------LLEAGQLITIRPHTRFVHFPEHTHNYVEVIYMCRGETTHV 83 Query: 61 INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLS----WPLDKDLINHV 116 ++ ++ + +G + ++ G F + F + +++L+ Sbjct: 84 VDGRELKLKEGELLFLNQHAVQEIQPAGQDDIAVNFIILPEFFDTAFRMMGEEENLLRDF 143 Query: 117 THGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKR---FSLSGWEPIL 173 G + + F++ N + L + G+ L + Sbjct: 144 IVGCLCDDTRYGRYLHFQIADVLPVQNLVENLVWSLMHEREGMQAMNQTTMGLLLRHLMH 203 Query: 174 VNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQ 233 R +++S Q Q+L +I E+Y + ++ ++A + + + R++ Sbjct: 204 YTGRIRVNRDSEQSFEQQLTLQVLRYIDEHYREG-SLTELAALMGYDVYWLSRAINRLLG 262 Query: 234 LTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 K+ + R+N LL T + D++ G+ ++S FY F Y GMSP++YRK Sbjct: 263 RNYKELLQIKRLNQAAFLLHSTRMPVADVSFAVGYDNTSYFYRIFRTYYGMSPKEYRKN 321 >UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHV0_9FIRM Length = 309 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 97/270 (35%), Gaps = 6/270 (2%) Query: 29 EIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTD-- 86 + A M +H+H + E+ + G + N G++ L + H Sbjct: 28 HMVRPANFDMRYNHFHQEYEIYLLLRGRRQMFFENRAYEAQAGNLILVDSGQIHMSHSIV 87 Query: 87 --TGTCQSMAIFNLPMHLFL--SWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQEL 142 T I + + + I H T + + R + Q + Sbjct: 88 GDPETEYERVILYVDRDIVEKVDKMFPELKIGAFFHKHYGIYELTPKQTANTRRLFLQIM 147 Query: 143 NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 ++ + ++ F V + + S V Q+ +I++ Sbjct: 148 EELDKAEPMSQTAILSELILGFIYFRRSNQQVACLNDVQEGKASGGKFDAVYQISDYISD 207 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 ++ + L+++ +AE ++ Y F V + +YI +R+ ++LL T S+ +I Sbjct: 208 HFQERLSLDSLAEQFYISKYYLSRSFHEVTGFGINEYINILRVKKAQSLLETTTLSVSEI 267 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRKL 292 A GF S + F KY ++P QYRK Sbjct: 268 ASRTGFESITYLGRVFKKYQHVTPAQYRKS 297 >UniRef50_B7C800 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C800_9FIRM Length = 295 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 8/262 (3%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 HWH ++ + G V Y +N + + + H D P Sbjct: 39 HWHEDLQFVLCTKGYVNYQVNGIEYKLKEKEALFINKGALHMSNDMSEDGEYVTLTFPEE 98 Query: 102 LFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQ--IRQLAIDEIGL 159 L + + + + V L +E++ + ++ + I D Sbjct: 99 LLFFFKE-----SRMKYKYVWPYTRMDFLRCYEIKEENEIISYLYDIYNIYLNGSDMFEY 153 Query: 160 MLKRFSLSGWEPILVNKTSRTH-KNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK 218 + W ++ + + N Q V ML +I +Y L++ D+A+ Sbjct: 154 DVSILITMIWRDLVKSLSKIDFIPNKKDVERQERVQVMLVYIHTHYADELSLKDIADAGM 213 Query: 219 LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTF 278 ++ F +++ +T +Y+ R+ LL D ++ +I+ GF + + F F Sbjct: 214 MSIAQCNRCFNKMLNVTPYEYLIQYRLQKATNLLKDATLNVTEISEIVGFNNVTHFIQAF 273 Query: 279 GKYVGMSPQQYRKLSQQRRQTF 300 K G+SP++YR + Q + Sbjct: 274 KKVYGISPKKYRMMEDQDEKGS 295 >UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4Y3_9CLOT Length = 291 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 101/258 (39%), Gaps = 11/258 (4%) Query: 42 HWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMH 101 H H E++ G Y N + + G I L+ H + + + + Sbjct: 35 HKHTAFEISCILSGSGLYKTQNALYHFHAGDIFLYSTNEIHYIIEIFDNCDILNLHFEPR 94 Query: 102 LFLSWP---LDKDLIN-HVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEI 157 S D +N HG ++ Q +R+ E+ + + + Sbjct: 95 FIWSPGNDLFDSKYLNIFFNHGDSFENCLEQDEDTARIRQLLLEIEKEFNE----KLPDY 150 Query: 158 GLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYV---SQMLGFIAENYDQALTINDVA 214 LM+K L+ + N + ++S+ ++ + L +I +N + +N +A Sbjct: 151 ELMVKVKVLTILVTLGRNFNFSIPQKALSQSRSQHLLQLDKALAYIDDNISSDIDLNTIA 210 Query: 215 EHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274 + ++ +Y IF+ + LT +YI R+ L+ TD SILDIA GF +++ F Sbjct: 211 KTAHMSRSYFSTIFKEMNGLTPWEYIINKRVELAAHYLTSTDFSILDIACKCGFNNTANF 270 Query: 275 YSTFGKYVGMSPQQYRKL 292 F K SP +RK Sbjct: 271 NHAFKKVTRKSPSDFRKS 288 >UniRef50_A5FA16 Transcriptional regulator, AraC family n=3 Tax=Flavobacteriales RepID=A5FA16_FLAJ1 Length = 292 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 99/288 (34%), Gaps = 11/288 (3%) Query: 8 CSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLI-NNEKV 66 + + + +PL + + + H+H + E+N +G + + Sbjct: 3 TAKNFYREIAPL--SAGDSFLVFDRVKDSFDFPVHYHPEFEINFILNGKGVRRVVGDNIE 60 Query: 67 NINQGHITLFWACTPHQLTDTGTCQ---SMAIFNLPMHLFLSWPLDKDLINHVTHGMVIK 123 I+ + L H LF L + ++N + M + Sbjct: 61 EIDNVELVLIGPNLYHGWELNKCTNKKIHEITIQFHNDLFHESLLARRIMNPI-RDMFNR 119 Query: 124 SLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKN 183 S+ S L ++ EI +L + S + +L T K Sbjct: 120 SIHGILFSKKTAEELTPRLVRLSKLDGIDYFLEITSLLYDLANSRNQRLLSTYTVDYDK- 178 Query: 184 SVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAM 243 + + ++ +++ + +T+ DVA ++ ++ T YI + Sbjct: 179 ---FDDYDKMKLVYEYVQKHFAEKITLEDVANVASMSIISFNRFIKKRTGKTFVNYINDI 235 Query: 244 RINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 RI + L + D S+ ++A +GF + + F +F +P QYR+ Sbjct: 236 RIGYAARWLVEKDMSVSEVAFKSGFNNIANFNRSFKAIKNCTPSQYRE 283 >UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KK32_CLOPH Length = 295 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 124/295 (42%), Gaps = 9/295 (3%) Query: 5 TFMCSSDEKQTRSPLSLYSEYQRMEIEF--RAPHIMPTSHWHGQVEVNVPFDGDVEYLIN 62 + + K+ + + + + E + HWH ++E+ + GD+ Y +N Sbjct: 2 QIITNKFHKEMKEHGNDQFPFL-ISYERLSKYESGSFLWHWHPEIELTLIVKGDMIYTVN 60 Query: 63 NEKVNINQGHITLFWACTPHQL--TDTGTCQSMAIFNLPMHLF--LSWPLDKDLINHVTH 118 + +++++G + H + C+ ++I P ++ + + + +T Sbjct: 61 DHPLHLHEGEALFGNVSSFHTGTKFENKDCEYISITFDPKLIYGYENSITYRKYVEPITQ 120 Query: 119 GMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTS 178 + ++ + + + A E+ ++++ W+ + ++ S Sbjct: 121 NFSLSAIQLDYSEEWHNNIIEIIKEIIAIGQNKEASYELDILMR--LQQLWKILYLHNNS 178 Query: 179 RTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQ 238 + + +L ++ NY LT+ ++AEH+ L + +F+R M++++ + Sbjct: 179 APAMTPYDKRNYDRIRSILSYVDNNYAMKLTLEEIAEHIHLCKSECCRLFKRYMKVSLFE 238 Query: 239 YITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 +I RI L+D+ SI++IA GF S+ + F K G SP +YRK + Sbjct: 239 FILQYRIEKSLNYLADSQYSIIEIANFVGFNDSNYYSKVFTKIKGCSPTKYRKKN 293 >UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR68_9FIRM Length = 301 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 103/294 (35%), Gaps = 4/294 (1%) Query: 3 TDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIM-PTSHWHGQVEVNVPFDGDVEYLI 61 D + ++T S S + + HWH +VE G ++L+ Sbjct: 7 KDRIITDETLRETASHGSEEYPFCYYYEDIWDFDFHCIDWHWHPEVEFVYVQQGMADFLV 66 Query: 62 NNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL-FLSWPLDKDLINHVTHGM 120 + ++ G + H+ T + I P+ L + I + Sbjct: 67 GGNRYVLSSGDGIFINSQVIHRFEATDSAIIPNIVFSPVLLAPQGSLIYSRYIRPIIEST 126 Query: 121 VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT 180 + + + + R + + S E+ L + T Sbjct: 127 TECVIFSAEETAH--RSIIETMRSVFAVQGSGTASEMKTAELLLKLWRLLYESILITDCG 184 Query: 181 HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI 240 + S Q + M+ +I +NY +T++D+A V ++ + + IF+ + + Y+ Sbjct: 185 SMSVHSAQTQAKLQIMMQYIHDNYSGQITLDDIARTVLISKSSVLNIFRTYLHTSPINYV 244 Query: 241 TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQ 294 R+ LL DT+ S+ IA GF + F F K G++P YR + Sbjct: 245 VEYRLKCASKLLVDTENSVCTIAHETGFENIGYFCRRFKKLYGVTPIYYRNHGR 298 >UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WI14_BACSK Length = 275 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 90/265 (33%), Gaps = 12/265 (4%) Query: 28 MEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT 87 + R + H+H +E+ +G + + + + + PH Sbjct: 19 FIFQARTTERVIPMHFHSNMELIYCINGSLRVWHEGKVTTLMDKDMLFINSNVPHSTQSL 78 Query: 88 GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNE 147 + + P F S + ++ + + +QL + + L Sbjct: 79 TE-NRVLVLYFPKSFFASEQV-----------LIQLNTSEEQLDEQVLSNLRTLLMEIYN 126 Query: 148 QIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQA 207 + L R + + + SR + + +L FI E+Y + Sbjct: 127 LHYSTGTYDYILAQSRIIELKYWLARHFSQTAELSPATSRSDRQKIQTILDFIKEHYTEN 186 Query: 208 LTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAG 267 +++ + A + Y +F T +Y + + LL T+KS+ +I+ G Sbjct: 187 ISLAETARICGYSEAYLSRMFHEYTGQTFTEYKQILCLEKAIDLLDTTNKSLTEISYETG 246 Query: 268 FRSSSRFYSTFGKYVGMSPQQYRKL 292 F + F F + +G +P +Y+K Sbjct: 247 FPNVKSFRKVFKEVMGKTPYEYKKS 271 >UniRef50_B1Y6T0 Transcriptional regulator, AraC family n=4 Tax=Burkholderiales RepID=B1Y6T0_LEPCP Length = 315 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 92/274 (33%), Gaps = 14/274 (5%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 +E P + H+H + E+++ + + + G + L PH Sbjct: 43 LEHGFPTPLARWHYHDEYELHLITSTSGKVFVGDWIGQFQPGQLVLTGPRLPHNWVSMDV 102 Query: 90 CQ-----SMAIFNLP--MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQEL 142 + + P + + + + + +S WQ+ Sbjct: 103 PEGGVPLRDLVIQFPHEPLVRAAETIPELAELLPLLERARHGIEFFGISDRAQAHWQRVK 162 Query: 143 NSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAE 202 S + ++ ++ H+ + ++ + + Sbjct: 163 ASR-------GLRRFTEFCTFLCDLSACTDYRLLSNVQLQSVDDDHSLDQIDAVVMRLTD 215 Query: 203 NYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDI 262 N Q ++ DVA + ++ + F+R T ++ +RIN LL ++D+ I I Sbjct: 216 NLAQPISAADVAAELGMSESRFSRFFRRATGNTFTDFVNRVRINRACQLLMESDRLITHI 275 Query: 263 ALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQR 296 GF + + F F + GM+P ++RK + R Sbjct: 276 CYEVGFNNVANFNRRFLEIKGMTPSEFRKQADNR 309 >UniRef50_Q93PA7 MS124, putative transcriptional activator n=1 Tax=Microscilla sp. PRE1 RepID=Q93PA7_9SPHI Length = 283 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 93/266 (34%), Gaps = 5/266 (1%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGT 89 + P H+H + E+ + G + ++ + +G + + + PH + Sbjct: 19 FIYSKPTFESPWHFHPEYELTLILKGSGIRYVGDDISDFKEGDLVMLGSNLPHCWKNDQE 78 Query: 90 CQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQI 149 L + WP + +G+ +Q+ + N + + Sbjct: 79 HTGE-----SKSLVIQWPEKTIGDLPLFNGIKTLMTKSQRGLRLGAEILNRTSNLMYKVL 133 Query: 150 RQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALT 209 I +++ + T ++ +S + + F+ Y + Sbjct: 134 ESSGIQRYLRLIELLDHLAEQAEHNFITGASYSYDLSSSTTNRLDTVQTFVKNRYKGKIR 193 Query: 210 INDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFR 269 ++DVA+ + ++ F + M ++ R+N ++ +TD + +IA G+ Sbjct: 194 LSDVADELNMSEQAFSRFFSKTMNKPFFLFLNEYRVNIASRMILETDLQMAEIAYKCGYD 253 Query: 270 SSSRFYSTFGKYVGMSPQQYRKLSQQ 295 S FY F K G +P +RK+ Sbjct: 254 SLPFFYKQFKKLKGYTPLDFRKMYTH 279 >UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0C8_RUMGN Length = 301 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 103/280 (36%), Gaps = 7/280 (2%) Query: 19 LSLYSEYQRMEIE---FRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITL 75 + YSE + + +E + + M ++H+H + E+ +G+ + NN + +G + L Sbjct: 4 IIYYSEMEGISLEHLKRSSGYDMRSNHFHNEYEIYFLTEGERLFFFNNRAYQVKKGSLIL 63 Query: 76 FWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLA----TQQLS 131 H + + + H+ + Q Sbjct: 64 VDTNLIHMTHAPEDDTTGYTRIILYIDKFKMQQFDEKFPHLNLVPFFREHYGVYNLTQKQ 123 Query: 132 PFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQF 191 + + L + + I + + + + + Sbjct: 124 QEKFLHMYEVLKTEFSNRSRSYKALIEMEIIHYFIDFIRDNPELTPIKDETAIHKSSKYQ 183 Query: 192 YVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRAL 251 + + +I+++Y ++++++ +A L+ Y F+ V + +Y+ +R + L Sbjct: 184 TIYNIADYISDHYAESISLDGLAGVFYLSKFYLSRSFKEVTGYGVNEYVNILRTKRAKQL 243 Query: 252 LSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRK 291 L +T S+ +IA T G+ S + F F Y+ +SP +YRK Sbjct: 244 LEETTLSVSEIAGTVGYESITYFEKVFKTYMSISPLKYRK 283 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 100/286 (34%), Gaps = 16/286 (5%) Query: 15 TRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHIT 74 P + H H E+ DG ++LI ++ I++ + Sbjct: 10 PEHPTAQNITLLNTSSSRYEGDWPSIPHSHAFTELFYVRDGQGDFLIEDQIFPISKDDLV 69 Query: 75 LFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFE 134 + H G+ L S+ K+ + + F Sbjct: 70 IINPHINHTEISKGSPPLSYFTVGVDGLCFSFNGHKEY-------RIFNCREKKTDLLFY 122 Query: 135 VRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVS 194 QEL+ +E + + +++ + T + ++H + Sbjct: 123 FNSLFQELDRQSEGYETICSHMLDILILQLRRI---------TDSPFELITAQHPSKECA 173 Query: 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSD 254 + ++ NY + +T++ ++E LN Y F + ++ Y+ RI + LL + Sbjct: 174 HIKRYLDSNYGENITLDHLSELSHLNKYYLSHEFTKYYGISPINYLNRKRIEVCKELLEN 233 Query: 255 TDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF 300 TD I DIA GF S S +F K GM+ YRKL ++R+ Sbjct: 234 TDYGISDIAHLTGFSSQSYLSQSFRKSCGMTAGTYRKLKKKRKDPI 279 >UniRef50_C6W148 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W148_DYAFD Length = 286 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 4/268 (1%) Query: 30 IEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDT-- 87 E + PH P H+H ++ +G + LI + G PH Sbjct: 19 HELKEPHFDPNWHFHPHYQLFTVLEGTGKRLIGDSIQTFGPGDTVFLGPDVPHLWRSDPA 78 Query: 88 --GTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSP 145 S+ + ++ + L G+ +++ ++ + Sbjct: 79 YFEAGSSLMTHGIVLYFQEDFLGKDFLEKPEMLGLRQLLADSKRGICYKGELSEHIREQL 138 Query: 146 NEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYD 205 I +L + +S + N+ + ++ ++ +++ Sbjct: 139 ISLTSVEGFKGILQLLTLLDKLAHDNSGEFISSYGYVNNFKVSETERMQKVHNYVLQHFF 198 Query: 206 QALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALT 265 Q + ++DVA + F+ T ++ +RI H LL + +I IA Sbjct: 199 QEIRLSDVASLAGMTEAAFCRYFKARSNKTFIDFVNEIRIGHACKLLLEDKWTIAQIAYD 258 Query: 266 AGFRSSSRFYSTFGKYVGMSPQQYRKLS 293 +GF S S F F KY+G +P++Y+ Sbjct: 259 SGFDSLSNFNRNFKKYIGHTPREYKGNY 286 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 90/267 (33%), Gaps = 16/267 (5%) Query: 33 RAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTG-TCQ 91 H H E+ G + I ++ N+ + + T H Sbjct: 29 YEGDWHSQLHSHHFTELFYVTKGCGGFKIGADEFNVQENDFVIINPNTMHTEVSRDRNPL 88 Query: 92 SMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQ 151 + + F + + + + F + +E + NE Sbjct: 89 EYIVIAIDGISFEIP------EDSLKDYISCNYANYKNEILFYLNLMVKESQAKNELYDD 142 Query: 152 LAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTIN 211 + + ++L + + + K + + +I NY + +T++ Sbjct: 143 MCQQLMQVLLINILRLNRINVSLTQGKTIRKE---------IFMIKNYIDRNYHKEITLD 193 Query: 212 DVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSS 271 +AE +N Y F+ + ++ Y+ RI + LL DTD SI I+ GF S Sbjct: 194 TLAEKTHMNKFYLAHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGFSSL 253 Query: 272 SRFYSTFGKYVGMSPQQYRKLSQQRRQ 298 S F F K SP QYRK Q+ + Sbjct: 254 SYFAQAFKKSTNFSPLQYRKNHQKYNK 280 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 97/256 (37%), Gaps = 17/256 (6%) Query: 41 SHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQ-SMAIFNLP 99 H H E+ G+ ++L NE +I G + + H + + Sbjct: 36 FHTHHFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYLEHTEQSVKGKSLEYYVIGID 95 Query: 100 MHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGL 159 FL+ + + Q + E+ + + + + + + Sbjct: 96 KISFLAENGQTGIQAFC-------NFRDQSSVSDIFAQMLYEMRNDDYGSEIICQNLLEI 148 Query: 160 MLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKL 219 ++ R S + + R K +Q+ ++ NY + +T++ + + Sbjct: 149 LILRIIRSQRLIPISINSERMTKE---------CAQIKEYLDTNYTERITLDTLTSLTHM 199 Query: 220 NANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFG 279 N Y F + L+ QY+ R+ LL DTD S+ DIA + GF S S F +F Sbjct: 200 NKYYMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQSYFTQSFR 259 Query: 280 KYVGMSPQQYRKLSQQ 295 KY GM+P QYR+ + + Sbjct: 260 KYYGMTPLQYRQQNAE 275 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.151 0.469 Lambda K H 0.267 0.0466 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,091,793,714 Number of Sequences: 3077464 Number of extensions: 126432593 Number of successful extensions: 387932 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 20201 Number of HSP's successfully gapped in prelim test: 2607 Number of HSP's that attempted gapping in prelim test: 331583 Number of HSP's gapped (non-prelim): 28741 length of query: 302 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 174 effective length of database: 646,480,964 effective search space: 112487687736 effective search space used: 112487687736 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 93 (40.2 bits)