38 c3in1A_ Probab=99.71   E-value=3.8e-15  Score=106.69  Aligned_columns=229  Identities=20%

Q ss_pred             CHHHHHHHHHHHHHCCCEEEEEEEE-----------------------------------EEEECCCCCCEEEEECCHHH
Q ss_conf             7535787789999879843466566-----------------------------------76307998711589889899
Q batch____        28 GSVGNSIAVPAIKQNGLNVFAVPTV-----------------------------------LLSNTPHYDTFYGGAIPDEW   72 (283)
Q Consensus        28 G~~g~~a~i~~l~~~G~~~~~v~T~-----------------------------------l~s~~tg~~~~~~~~~~~e~   72 (283)
                      ||.|..++ ..++++|+++..+..+                                   ....+.+.............
T Consensus        39 GG~~~Nva-~~la~lG~~v~~i~~iG~d~~g~~i~~~l~~~gi~~~~i~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~  117 (312)
T c3in1A_          39 GGDAINEA-TIISRLGHRTALXSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLW  117 (312)
T ss_dssp             ESHHHHHH-HHHHHTTCCEEEEEEEESSHHHHHHHHHHHHHTCBCTTEEEETTSCCCEEEEEEETTSCEEEECCTTSHHH
T ss_pred             CCHHHHHH-HHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC
T ss_conf             85799999-99997799339998605997899999987741478615896088762269999879963799833776543


Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999999852785788889993459989999999999984012887105432100016898557976899999964430
Q batch____        73 FSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPL  152 (283)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~av~iG~l~s~~~~~~v~~~l~~~~~~~~~~~iv~DPvm~d~~g~~~~~~~~~~~~~~~Ll~~  152 (283)
                      .....+...........-.+..+.+...-..+.+.++++..+..  +.++++|    ..........+...    .++++
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d----~~~~~~~~~~~~~~----~~l~~  187 (312)
T c3in1A_         118 KLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKAR--QXIICAD----XIKPRLNETLDDIC----EALSY  187 (312)
T ss_dssp             HCCGGGCCGGGGGGCSEEEEEEETTSTTSCHHHHHHHHHHHHTT--TCEEEEE----ECCCSSSCCGGGGH----HHHTT
T ss_pred             CCCHHHHCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHC--CCEEEEE----CCCCCHHHHHHHHH----HHHHC
T ss_conf             25966403211046988999702346788999999999998873--9889940----87632135556689----87401


Q ss_pred             CCEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCC-CCCCH
Q ss_conf             88995598999998389998967999999999985798899907877664556269995599799913676687-85785
Q batch____       153 AQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVKT-DLKGT  231 (283)
Q Consensus       153 adiitPN~~Ea~~L~g~~~~~~~~~~~a~~~l~~~g~~~vvi~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Ga  231 (283)
                      +|++.||..|+..+.+..     +..++++.+.+++++.++++.|.      .+..++..++.++..+++...+ |++|+
T Consensus       188 ~d~~~~~~~e~~~~~~~~-----~~~~~~~~l~~~~~~~vivt~G~------~G~~~~~~~~~~~~~~~~~~~vvdttGA  256 (312)
T c3in1A_         188 VDYLFPNFAEAKLLTGKE-----TLDEIADCFLACGVKTVVIKTGK------DGCFIKRGDXTXKVPAVAGITAIDTIGA  256 (312)
T ss_dssp             CSEEECBHHHHHHHHCCC-----SHHHHHHHHHHTTCSEEEEECGG------GCEEEEETTEEEEECCCSSCCCSCCTTH
T ss_pred             CCEEEECHHHHHHHCCCC-----CHHHHHHHHHHHCCCEEEEEECC------CEEEEEECCEEEEECCCCCCCCCCCCCH
T ss_conf             999986657755304788-----78999999998389889983469------6059997784552146675200257770


Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             589999999999879998999999999999999998627986327785101
Q batch____       232 GDLFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQHESDELILPPLAE  282 (283)
Q Consensus       232 GD~fsa~l~~~l~~G~~l~~A~~~A~~~~~~~i~~~~~~~~~el~lp~~~~  282 (283)
                      ||+|.|+|+++|++|+++++|++.|+......+++-.....-    |..+|
T Consensus       257 GD~f~ag~~~~l~~g~~~~~al~~a~~~aa~~v~~~G~~~~~----p~~~e  303 (312)
T c3in1A_         257 GDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGV----KNRKL  303 (312)
T ss_dssp             HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSSSC----SSSHH
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCC----CCHHH
T ss_conf             268899999999879998999999999989984104788889----89899