11 c1ni5A_ Probab=99.91   E-value=2.2e-23  Score=158.41  Aligned_columns=189  Identities=11%

Q ss_pred             HHHHHHHCCCEEEEECCHHHHHHHHHHHHHHH-HHCCCCEEEEEECCCCCC--HHHHHHHHHHHHHHCCCEEEEECCHHH
Q ss_conf             99999753988999439268999999999997-423897799994498983--589999999999809918998676577
Q batch____        20 IREVAAEFSNPVMLYSIGKDSSVMLHLARKAF-YPGTLPFPLLHVDTGWKF--REMYEFRDRTAKAYGCELLVHKNPEGV   96 (302)
Q Consensus        20 ir~~~~~~~~i~v~~SGGKDS~vlL~L~~~a~-~~~~~~i~vv~iDtg~ef--pet~~~~~~~~~~~~l~l~~~~~~~~~   96 (302)
                      ....+...++++|++|||+||+||||++.+.. ...+.++.++|+|+|+..  .+..+|+.++++++|+++++....   
T Consensus         6 ~~~~~~~~~~vlva~SGG~DS~~Ll~~l~~~~~~~~~~~l~~~hvdhglr~~s~~~~~~v~~~~~~~~i~~~~~~~~---   82 (433)
T c1ni5A_           6 LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQ---   82 (433)
T ss_dssp             HHHHHTTCSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred             HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE---
T ss_conf             52176899779999679711799999999984204896699999675888285888999999999709968999965---


Q ss_pred             HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             40478887777789775717999999986099299984324334001014210134333456643344200112345566
Q batch____        97 AMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQIN  176 (302)
Q Consensus        97 ~~~~~~~~~~~~~cc~~~K~~pl~~~l~~~g~~~~i~G~R~dEs~~Ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (302)
                         ......+.+.+|...+...+.+.+.  +.++++|||+.||..++..+..+++....+...+...+...         
T Consensus        83 ---~~~~~~~~e~~aR~~Ry~~~~~~~~--~~~~i~~aH~~dD~aEt~l~~l~rG~~~~gl~~~~~~~~~~---------  148 (433)
T c1ni5A_          83 ---LAQEGLGIEAQARQARYQAFARTLL--PGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAXAEVSEFA---------  148 (433)
T ss_dssp             ---CCCSSSTTTTHHHHHHHHHHHHTCC--TTEEEECCCCHHHHHHHHHHHHTTTCCTTGGGCCCSEEEET---------
T ss_pred             ---CCCCCCCHHHHHHHHHHHHHHHHHH--HCCEEEEEECHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC---------
T ss_conf             ---0546889989999999999999986--09849994043578999999862399843336670002258---------


Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             78749998333389999999999818980757455545310000111222333211243
Q batch____       177 KGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQP  235 (302)
Q Consensus       177 ~~~~~~i~PI~~Ws~~DVw~Yi~~~~lP~npLY~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (302)
                        +...++|+++++++||..|+..++||+        .++.+|....+.+|+.|..++|
T Consensus       149 --~~~iiRPLl~~~k~eI~~y~~~~~l~~--------~eD~sN~~~~y~RNriR~~iiP  197 (433)
T c1ni5A_         149 --GTRLIRPLLARTRGELVQWARQYDLRW--------IEDESNQDDSYDRNFLRLRVVP  197 (433)
T ss_dssp             --TEEEECGGGSCCHHHHHHHHHHTTCCC--------BCCCCGGGTTSHHHHHHHTHHH
T ss_pred             --CCEEECCCCCCCHHHHHHHHHHCCCCE--------EECCCCCCCCHHHHHHHHHHHH
T ss_conf             --967980576798999999999808975--------7178986872068999878678


