Phyre 2 alignment of P67729 with c1l6lK_

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Job Description | P67729
Confidence | 3.25% | Date | Thu Jan 5 12:10:50 GMT 2012
Rank | 45 | Aligned Residues | 24
% Identity | 13% | Template | c1l6lK_
PDB info | PDB header:lipid transport | Chain: K: PDB Molecule:apolipoprotein a-ii; | PDBTitle: structures of apolipoprotein a-ii and a lipid surrogate2 complex provide insights into apolipoprotein-lipid3 interactions
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | I | A | A | G | M | V | A | V | W | C | L | P | R | L | H | A | M | M | H | Q | M | K | N | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | L | V | S | Q | Y | F | Q | T | V | T | D | Y | G | K | D | L | M | E | K | V | K | S | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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