135 c1vmaA_ Probab=97.41   E-value=0.0025  Score=39.60  Aligned_columns=130  Identities=16%

Q ss_pred             CCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHHHCCEEEECCCCCCCCCCHHHH
Q ss_conf             34245879988999859999889999998347888842799856605448988898885103899636222878879999
Q batch____        20 GVTFHMQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDN   99 (222)
Q Consensus        20 ~is~~i~~Gei~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~i~~~~~~~~~~lr~~i~~v~q~~~~~~~~tv~e~   99 (222)
                      .+.+.-.+..+++++||+|+||||.+--|+..+.-..-+|.+-..|..+.                              
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~------------------------------  133 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA------------------------------  133 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH------------------------------
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH------------------------------
T ss_conf             00235789669999806887602489999999996799489997587686------------------------------


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf             88578734999889999999999986992352012010798989999999999847989999288888898999999999
Q batch____       100 VAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRL  179 (222)
Q Consensus       100 i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lSgG~~qrl~la~al~~~p~ililDEp~~glD~~~~~~i~~~  179 (222)
                                   -..+....+.+.+++.-.....+..++.-.++-+..++  ..+.++++.|-|=-+-.......=++.
T Consensus       134 -------------gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~IlIDTaGr~~~d~~~~~el~~  198 (294)
T c1vmaA_         134 -------------AAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHAL--ARNKDVVIIDTAGRLHTKKNLMEELRK  198 (294)
T ss_dssp             -------------HHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHHHH--HTTCSEEEEEECCCCSCHHHHHHHHHH
T ss_pred             -------------HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCHHHHHHHHH
T ss_conf             -------------47999999997619828974883698999999999999--779989998188898785799999999


Q ss_pred             HHHHHH------CCCEEEEEE
Q ss_conf             999997------798799991
Q batch____       180 FEEFNR------VGVTVLMAT  194 (222)
Q Consensus       180 l~~~~~------~g~tii~~s  194 (222)
                      +.+..+      ...++++.+
T Consensus       199 ~~~~~~~~~~~~p~~~~LVl~  219 (294)
T c1vmaA_         199 VHRVVKKKIPDAPHETLLVID  219 (294)
T ss_dssp             HHHHGGGTCTTCCSEEEEEEE
T ss_pred             HHHHHHHCCCCCCCEEEEEEE
T ss_conf             999963035668853999811