33 c3ojaA_ Probab=99.82   E-value=1.1e-19  Score=99.04  Aligned_columns=224  Identities=16%

Q ss_pred             CCHHHHCCCCCCCEEECCCCCCCCCC---HHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             86148602899989998888046438---666788889988887578676200012364120044555433332212343
Q batch____         2 ITDLILHNHPRMKTITLNDNHIAHLN---AKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYW   78 (318)
Q Consensus         2 ip~~~f~~l~~L~~L~Ls~N~L~~l~---~~~l~~L~~L~Ls~N~l~~l~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~   78 (318)
                      ++..+|..+.+|++|||++|+|+.++   ++.+++|++|+||+|.|+.+++ +..++.|+.++++.|.+..++....-..
T Consensus        25 ~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~~-l~~l~~L~~L~Ls~N~l~~l~~~~~l~~  103 (482)
T c3ojaA_          25 ALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLVGPSIET  103 (482)
T ss_dssp             HHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEECTTCCE
T ss_pred             HHHHHHHCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCE
T ss_conf             447887315788899888882655493385168888789787885677765-0008867789788983343778876345


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             32222222222222222222233333333332222332222232222222222222222222222222222222211122
Q batch____        79 TAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQFTHFDATNYDRLVKLSLNSNALESINFPQGRNVSITHIS  158 (318)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (318)
                      .......................................                                         
T Consensus       104 l~l~~n~i~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~-----------------------------------------  142 (482)
T c3ojaA_         104 LHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGC-----------------------------------------  142 (482)
T ss_dssp             EECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGG-----------------------------------------
T ss_pred             EECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHCC-----------------------------------------
T ss_conf             863665345478000444321101237656778500013-----------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             22223222222222233322222222221112345543332122223322222222222233322222223444432222
Q batch____       159 MNNNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNL  238 (318)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (318)
                                                   ..................................................+
T Consensus       143 -----------------------------~~~l~~L~l~~n~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~~~~~l  193 (482)
T c3ojaA_         143 -----------------------------RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKL  193 (482)
T ss_dssp             -----------------------------GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTC
T ss_pred             -----------------------------CCCCCEEECCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCC
T ss_conf             -----------------------------676665326668778688567742024343103578855436842112224


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEECCCCCCCC
Q ss_conf             22221111222221212588888899988885774484597068988899888971573
Q batch____       239 NTLLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITH  297 (318)
Q Consensus       239 ~~~~l~~n~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~l~~l~~L~~L~Ls~N~L~~  297 (318)
                      ..+.+.+|.+...+..+..++.|+.|++++|.++.+++. +..+++|+++++++|.+..
T Consensus       194 ~~l~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-l~~~~~L~~l~l~~N~~~~  251 (482)
T c3ojaA_         194 KTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKA-LRFSQNLEHFDLRGNGFHC  251 (482)
T ss_dssp             CEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTT-CCCCTTCCEEECTTCCBCH
T ss_pred             CCCCCCCCCCCCCCHHHHCCCCCCEEHHHHCCHHHHHHH-HHCCCCCCEECCCCCCCCC
T ss_conf             815357582123772340168758703200002022456-5215787766657885432