46 c1otnA_ Probab=99.73   E-value=9.4e-18  Score=90.82  Aligned_columns=194  Identities=10%

Q ss_pred             CCCHHHHCCCCCCCEEECCCCCCCCCC-HHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             986148602899989998888046438-6667888899888875786762000123641200445554333322123433
Q batch____         1 MITDLILHNHPRMKTITLNDNHIAHLN-AKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWT   79 (318)
Q Consensus         1 ~ip~~~f~~l~~L~~L~Ls~N~L~~l~-~~~l~~L~~L~Ls~N~l~~l~~~~~~~~~l~~l~l~~n~~~~~~~~~~~~~~   79 (318)
                      |.||   .++.++..+++++|++++.. ++.+++|++|++++|.|+++++ ...++.++.++++.|.+............
T Consensus        12 ~~pd---~~l~~l~~l~l~~n~~~~~~~~~~l~~L~~L~Ls~N~i~~l~~-l~~l~~L~~L~l~~N~~~~~~~~~~~~~~   87 (207)
T c1otnA_          12 IFPD---AAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKPLTNLKNL   87 (207)
T ss_dssp             HCCS---HHHHHHHHHHTTCSCTTSEECHHHHHTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGGGTTCTTC
T ss_pred             CCCC---HHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEECCCCCCCCCCC-HHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             1758---7899999986377788875697773656899917998888679-65620132111123333221122343321


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             22222222222222222222333333333322223322222322222222222222222222222222222222111222
Q batch____        80 AVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQFTHFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISM  159 (318)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (318)
                      ...........                                                                     
T Consensus        88 ~~~~~~~~~~~---------------------------------------------------------------------   98 (207)
T c1otnA_          88 GWLFLDENKIK---------------------------------------------------------------------   98 (207)
T ss_dssp             CEEECCSSCCC---------------------------------------------------------------------
T ss_pred             CCCCCCCCCCC---------------------------------------------------------------------
T ss_conf             00112222322---------------------------------------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             22232222222222333222222222211123455433321222233222222222222333222222234444322222
Q batch____       160 NNNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLN  239 (318)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (318)
                                               .......................................................
T Consensus        99 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (207)
T c1otnA_          99 -------------------------DLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKL  153 (207)
T ss_dssp             -------------------------CGGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTC
T ss_pred             -------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             -------------------------2222222222222222222222222222222222222222222222222222222


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEECCCCC
Q ss_conf             2221111222221212588888899988885774484597068988899888971
Q batch____       240 TLLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNK  294 (318)
Q Consensus       240 ~~~l~~n~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~l~~l~~L~~L~Ls~N~  294 (318)
                      ...............+..+++|++|++++|+|+++++  |+++++|++|+|++|+
T Consensus       154 ~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~lt~l~~--l~~l~~L~~L~L~~Nq  206 (207)
T c1otnA_         154 DTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRA--LAGLKNLDVLELFSQE  206 (207)
T ss_dssp             SEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCCCCCEEECCSCC
T ss_pred             CCCCCCCCCCCCCCHHCCCCCCCEEECCCCCCCCCCH--HHCCCCCCEEECCCCC
T ss_conf             2222222234443112018999799988986789735--4168999899675884