14/01/2012 20:30:24 : INFO  : Run start: Sat Jan 14 20:30:23 GMT 2012
14/01/2012 20:30:30 : INFO  : Initialised job
14/01/2012 20:30:32 : INFO  : Renaming log file 'phyre2_20120114_203023.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/9bcdf97e57716955/phyre_20120114_203023.log'
14/01/2012 20:30:33 : INFO  : Initialised job:
Sequence
>batch____
MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLW
HVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQF
THFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSA
AHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNT
LLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDT
NNTSDIGTLFPIIKQSKT

14/01/2012 20:30:34 : INFO  : Checked sequence
14/01/2012 20:30:38 : INFO  : Finding homologues with PSI-BLAST
14/01/2012 20:30:39 : INFO  : PSI-BLAST 3 iterations
14/01/2012 20:33:15 : INFO  : PSI-BLAST 5 iterations
14/01/2012 20:38:44 : INFO  : Finished PSI-BLAST
14/01/2012 20:38:46 : INFO  : Running Buildali to generate a3m file
14/01/2012 22:20:53 : INFO  : Converting to HMM
14/01/2012 22:21:16 : INFO  : Calibrating HMM
14/01/2012 22:21:31 : INFO  : Searching HMM database
14/01/2012 22:26:57 : INFO  : Finished buildali
14/01/2012 22:26:59 : INFO  : Predicting secondary structure
14/01/2012 22:27:09 : INFO  : Predicted secondary structure (PSI-Pred)
14/01/2012 22:27:10 : INFO  : Predicting Disordered regions
14/01/2012 22:27:15 : INFO  : Predicted Disorder (Disopred)
14/01/2012 22:27:16 : INFO  : Running memsat_svm check
14/01/2012 22:27:40 : INFO  : Globular protein
14/01/2012 22:27:41 : INFO  : Predicted Transmembrane (memsat_svm) ID '9bcdf97e57716955'
14/01/2012 22:27:43 : INFO  : Initialising fold library search
14/01/2012 22:27:47 : INFO  : Initialised search input
14/01/2012 22:27:49 : INFO  : Building Ensemble models
14/01/2012 22:27:53 : INFO  : Building hh.c2ft3B_.model.1.pdb
14/01/2012 22:28:13 : INFO  : Building hh.c3ojaB_.model.2.pdb
14/01/2012 22:28:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/9bcdf97e57716955/hh.c3ojaB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/9bcdf97e57716955/c3ojaB_.2.pdb
14/01/2012 22:28:32 : INFO  : Building hh.d2omza2.model.3.pdb
14/01/2012 22:28:48 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/9bcdf97e57716955/hh.d2omza2.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/9bcdf97e57716955/d2omza2.3.pdb
14/01/2012 22:28:54 : INFO  : Building hh.c1xkuA_.model.4.pdb
14/01/2012 22:29:07 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/9bcdf97e57716955/hh.c1xkuA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/9bcdf97e57716955/c1xkuA_.4.pdb
14/01/2012 22:29:12 : INFO  : Building hh.d1xkua_.model.5.pdb
14/01/2012 22:29:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/9bcdf97e57716955/hh.d1xkua_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/9bcdf97e57716955/d1xkua_.5.pdb
14/01/2012 22:29:34 : INFO  : Building hh.c2id5D_.model.6.pdb
14/01/2012 22:29:50 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/9bcdf97e57716955/hh.c2id5D_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/9bcdf97e57716955/c2id5D_.6.pdb
14/01/2012 22:29:55 : INFO  : Building c2ft3B_.1.pdb
14/01/2012 22:30:12 : INFO  : Building c3ojaB_.2.pdb
14/01/2012 22:30:28 : INFO  : Building d2omza2.3.pdb
14/01/2012 22:30:46 : INFO  : Building c1xkuA_.4.pdb
14/01/2012 22:31:01 : INFO  : Building d1xkua_.5.pdb
14/01/2012 22:31:16 : INFO  : Building c2id5D_.6.pdb
14/01/2012 22:31:34 : INFO  : Building c2z63A_.7.pdb
14/01/2012 22:31:48 : INFO  : Building c2omwA_.8.pdb
14/01/2012 22:32:02 : INFO  : Building c2z64A_.9.pdb
14/01/2012 22:32:18 : INFO  : Building c3o6nA_.10.pdb
14/01/2012 22:32:35 : INFO  : Building c3fxiA_.11.pdb
14/01/2012 22:32:52 : INFO  : Building c1ziwA_.12.pdb
14/01/2012 22:33:08 : INFO  : Building c3rg1I_.13.pdb
14/01/2012 22:33:25 : INFO  : Building c3a79A_.14.pdb
14/01/2012 22:33:46 : INFO  : Building c2a0zA_.15.pdb
14/01/2012 22:34:05 : INFO  : Building c2z7xB_.16.pdb
14/01/2012 22:34:24 : INFO  : Building c3a79B_.17.pdb
14/01/2012 22:34:44 : INFO  : Building c3rgxA_.18.pdb
14/01/2012 22:35:05 : INFO  : Building c2z81A_.19.pdb
14/01/2012 22:35:26 : INFO  : Building c2z80A_.20.pdb
14/01/2012 22:37:52 : INFO  : Finished HH model building
14/01/2012 22:37:54 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
14/01/2012 22:39:10 : INFO  : html domain output complete ID '9bcdf97e57716955'
14/01/2012 23:24:09 : INFO  : Run end  : Sat Jan 14 23:24:07 GMT 2012
