1 d1musa_ Probab=98.61   E-value=5.6e-08  Score=64.81  Aligned_columns=182  Identities=15%

Q ss_pred             HHHHHHHHHCCCCCEEEECCCHHHHHHHHH-----HCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
Q ss_conf             999999974186200100288999877686-----078689999750200477655222360234577774485899999
Q batch____        31 EWIQHCLTLSAHATVRRRRLPGDMVIWMVV-----QNEPITDVVRRLNLSADGEAGMNLLARSAVTQARQRVGAAPVEWL  105 (299)
Q Consensus        31 e~i~~~l~~tg~a~~R~R~LPa~~~vw~vi-----r~~s~~~V~~~L~~~~~~~~~~~~~a~Sai~qARqRLG~~pl~~L  105 (299)
                      +|+++.+...+....|+++    ..+|++.     .+.|+.++|.......  .+.|.|.+...++--.      -+.-.
T Consensus         8 ~w~~~~~~~~~~gd~Rl~~----rl~~l~~~l~~~~~~sip~~~~~~~a~~--~AaYRFl~n~~v~~~~------i~~~~   75 (458)
T d1musa_           8 DWAKSVFSSAALGDPRRTA----RLVNVAAQLAKYSGKSITISSEGSKAAQ--EGAYRFIRNPNVSAEA------IRKAG   75 (458)
T ss_dssp             HHHHHHHTTCCCSSHHHHH----HHHHHHHHHHHTTTSCHHHHTTTCHHHH--HHHHHHHTCTTCCHHH------HHHHH
T ss_pred             HHHHHHHHHCCCCHHHHHH----HHHHHHHHHHHCCCCCCCHHHCCCHHHH--HHHHHHHCCCCCCHHH------HHHHH
T ss_conf             5889886516657047787----9999999974034786113322750123--4444553088878899------99999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCEEEEEECCEEEECCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE-----
Q ss_conf             998631102344565430332578751405535899889985277777777877555999999996247834665-----
Q batch____       106 FRQTAQDRGAERYLKDDWHGLQLFAIDGAQFRTPDKPELREYYGSANTSTKRQNAYPVMRLVALMNLGSHILLNA-----  180 (299)
Q Consensus       106 F~~~a~~~~~~~~~~~~w~G~Rv~aVDGt~~~~PDt~eN~~~Fg~~~~~~~~~~~fP~vrlv~L~el~t~~~lda-----  180 (299)
                      +.++.+....        +...++..|.|.+.--....  +..|..++......|| .++-+..++..++..++.     
T Consensus        76 ~~~t~~r~~~--------~~~vLii~DTT~l~~~~~~~--~~~g~~~~~~~~~~G~-~lHs~lav~~~~~~pLgl~~~~~  144 (458)
T d1musa_          76 AMQTVKLAQE--------FPELLAIEDTTSLSYRHQVA--EELGKLGSIQKASRGW-WVHSVLLLEATTFRTVGLLHQEW  144 (458)
T ss_dssp             HHHHHHHHTT--------CSCEEEEEEEEEEEECSGGG--GGSBCSSSTTCSCEEE-EEEEEEEEETTTCCEEEEEEEEE
T ss_pred             HHHHHHHCCC--------CCEEEEEECCCEEECCCCCC--CCCCCCCCCCCCCCCE-EEEEEEEEECCCCCCCCHHHHHH
T ss_conf             9999986166--------88169997155210468653--2235556656531115-88788887258764542122011


Q ss_pred             -----EEECCCCCHH-------HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf             -----7613567779-------99998742178984899945416989999998528621445440367
Q batch____       181 -----VTAPYRQSET-------VLAHSMLATIPDNSITLFDKLFYSEDLLLTLNQKGCNRHWLLPAWKN  237 (299)
Q Consensus       181 -----~igp~~~~E~-------~lA~~ll~~l~~~~LlL~DRGy~S~~ll~~~~~~G~~~hwli~ak~n  237 (299)
                           ...|+...|.       ..+...+.......+.++||||.+|+++..+...|.+  |++|++.|
T Consensus       145 ~~R~~~~~~~~eKeS~rw~e~~~~~~~~l~~~~~~vV~V~DRg~d~y~~f~~~~~~g~~--fLIR~k~n  211 (458)
T d1musa_         145 WMRPDDPADADEKESGKWLAAAATSRLRMGSMMSNVIAVCDREADIHAYLQDKLAHNER--FVVRSKHP  211 (458)
T ss_dssp             ECCCSSGGGCSSCGGGHHHHHHHHHHHHHGGGGGGEEEEECGGGCCHHHHHHHHHTTCE--EEEECCSC
T ss_pred             HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCCCC--EEEEECCC
T ss_conf             04565446646655566885799999740255652678663034769999754555981--89996256