Job Description P30192 Confidence 26.20% Date Thu Jan 5 11:46:17 GMT 2012 Rank 6 Aligned Residues 91 % Identity 20% Template c1d5yD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:rob transcription factor; PDBTitle: crystal structure of the e. coli rob transcription factor2 in complex with dna Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.							30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		L	L	N	D	L	L	D	F	S	D	H	P	L	M	P	P	P	S	A	Q	L	F	A	E	H	L	P	.	.	.	.	.	.	T	E	W	I	Q	H	C	L	T	L	S	A	H	A	T	V	R	R	R	R	L	P	G	D	M	V	I	W	M	V	V	Q	N	E	P	I	T	D	V	V	R	R	L	N	L	S	A
Query Conservation																													.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.																								.																				.	.	.	.
Template Conservation																																																										.																				.	.	.	.
Template Sequence		I	I	R	D	L	L	I	W	L	E	G	H	L	D	Q	P	L	S	L	D	N	V	A	A	K	A	G	Y	S	K	W	H	L	Q	R	M	F	K	D	V	T	G	H	A	I	G	A	Y	I	R	A	R	R	L	S	K	.	S	A	V	A	L	R	L	T	A	R	P	I	L	D	I	A	L	Q	Y	.	.	.	.
Template Known Secondary structure											T	T	T	S	S	S	S				T	T	T	T	T	T	T	S	S														S	S														.																			T	.	.	.	.
Template Predicted Secondary structure																																																										.																				.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		D	G	E	A	G	M	N	L	L	A	R	S	A	V	T	Q	A	R	.	Q	R	V	G	A	A	P	V	E	W
Query Conservation																				.
Alig confidence		.	.	.	.	.	.													.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	R	F	D	S	Q	Q	T	F	T	R	A	F	K	K	Q	F	A	Q	T	P	A	L	Y
Template Known Secondary structure		.	.	.	.	.	.	T		S	S													S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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