BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (496 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76237 Uncharacterized protein yeaJ n=99 Tax=Enterobact... 1028 0.0 UniRef50_UPI0001A43649 putative diguanylate cyclase n=1 Tax=Pect... 294 6e-78 UniRef50_B5Y6W9 Ggdef domain protein n=1 Tax=Coprothermobacter p... 115 5e-24 UniRef50_A6CUQ3 Putaitive GGDEF domain n=1 Tax=Vibrio shilonii A... 112 3e-23 UniRef50_D0YXF8 Putative two-component response regulator and GG... 109 2e-22 UniRef50_A5N8E8 Putative uncharacterized protein n=2 Tax=Clostri... 107 1e-21 UniRef50_C9QJS4 Putative two-component response regulator and GG... 107 1e-21 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 103 2e-20 UniRef50_Q4FF43 Sensory box histidine kinase n=5 Tax=Thermotoga ... 102 3e-20 UniRef50_A7HLS0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 102 4e-20 UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 101 5e-20 UniRef50_C8W0S4 Diguanylate cyclase n=1 Tax=Desulfotomaculum ace... 101 5e-20 UniRef50_Q2RGJ9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Moore... 100 9e-20 UniRef50_Q2RGK1 Diguanylate cyclase (GGDEF domain) n=1 Tax=Moore... 100 1e-19 UniRef50_B5YGD8 Sensory box/ggdef domain protein n=1 Tax=Thermod... 100 1e-19 UniRef50_C8R031 Diguanylate cyclase with GAF sensor n=2 Tax=Desu... 100 1e-19 UniRef50_O67439 Putative uncharacterized protein n=1 Tax=Aquifex... 99 3e-19 UniRef50_B5JWB1 Gaf/ggdef-domain containing protein n=1 Tax=gamm... 98 6e-19 UniRef50_C1SHV7 Diguanylate cyclase (GGDEF) domain-containing pr... 98 6e-19 UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 97 1e-18 UniRef50_Q7MFJ4 GGDEF family protein n=2 Tax=Vibrio vulnificus R... 97 1e-18 UniRef50_D1U9W6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 97 2e-18 UniRef50_B5YCH7 Ggdef domain protein n=1 Tax=Dictyoglomus thermo... 97 2e-18 UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilu... 96 2e-18 UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n... 96 2e-18 UniRef50_D0XGD0 Putative uncharacterized protein n=1 Tax=Vibrio ... 96 3e-18 UniRef50_C6MKE8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 96 3e-18 UniRef50_B9L6Y1 Diguanylate cyclase n=1 Tax=Nautilia profundicol... 96 4e-18 UniRef50_Q053C7 Two-component response regulator-(Cyclic diguany... 95 5e-18 UniRef50_Q2W7A4 Response regulator n=4 Tax=Proteobacteria RepID=... 95 5e-18 UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 95 6e-18 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 95 6e-18 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 95 6e-18 UniRef50_B1I2H9 Diguanylate cyclase n=3 Tax=Clostridia RepID=B1I... 95 6e-18 UniRef50_B5EUG0 Ggdef domain protein n=3 Tax=Aliivibrio RepID=B5... 95 7e-18 UniRef50_B1HWA5 Putative diguanylate cyclase (GGDEF domain) n=2 ... 95 7e-18 UniRef50_B5YCT8 Diguanylate cyclase (Ggdef) domain protein n=2 T... 94 9e-18 UniRef50_A4BNX7 Response regulator containing a CheY-like receiv... 94 9e-18 UniRef50_A7HLY2 Diguanylate cyclase n=1 Tax=Fervidobacterium nod... 94 9e-18 UniRef50_O66743 Putative uncharacterized protein n=1 Tax=Aquifex... 94 9e-18 UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 94 1e-17 UniRef50_Q3AB06 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 94 1e-17 UniRef50_A4BB60 Putative sensor protein n=1 Tax=Reinekea blanden... 94 1e-17 UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 94 1e-17 UniRef50_A5F8F8 GGDEF family protein n=28 Tax=Vibrio RepID=A5F8F... 94 2e-17 UniRef50_A1T384 Diguanylate cyclase n=2 Tax=Mycobacterium RepID=... 94 2e-17 UniRef50_Q2BJ34 Putative uncharacterized protein n=1 Tax=Neptuni... 93 2e-17 UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curviba... 93 2e-17 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 93 2e-17 UniRef50_A6B1L2 Ggdef domain protein n=6 Tax=Vibrio RepID=A6B1L2... 93 2e-17 UniRef50_D1B7T5 Diguanylate cyclase with GAF sensor n=1 Tax=Ther... 93 2e-17 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 93 2e-17 UniRef50_A6GF95 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesi... 93 3e-17 UniRef50_C9PHC5 Putative two-component response regulator and GG... 93 3e-17 UniRef50_Q6LT28 Putative uncharacterized protein n=1 Tax=Photoba... 93 3e-17 UniRef50_UPI0001AEC1FC diguanylate cyclase n=1 Tax=Alteromonas m... 93 3e-17 UniRef50_Q21FP0 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 93 3e-17 UniRef50_C1A9Y8 Putative uncharacterized protein n=1 Tax=Gemmati... 92 3e-17 UniRef50_A0YKK9 GGDEF domain protein n=1 Tax=Lyngbya sp. PCC 810... 92 4e-17 UniRef50_Q7MSX2 Putative uncharacterized protein n=1 Tax=Wolinel... 92 4e-17 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 92 4e-17 UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 92 4e-17 UniRef50_Q1NSC4 GGDEF:GAF n=2 Tax=delta proteobacterium MLMS-1 R... 92 5e-17 UniRef50_B4SNB1 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 92 5e-17 UniRef50_Q15WE3 Diguanylate cyclase n=1 Tax=Pseudoalteromonas at... 92 6e-17 UniRef50_Q5LU85 Diguanylate cyclase, putative n=4 Tax=Rhodobacte... 92 6e-17 UniRef50_D2L091 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW... 92 6e-17 UniRef50_B4U722 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp.... 92 6e-17 UniRef50_A8RJQ6 Putative uncharacterized protein n=1 Tax=Clostri... 92 6e-17 UniRef50_Q21LR8 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 92 6e-17 UniRef50_C1A7I4 Putative uncharacterized protein n=1 Tax=Gemmati... 92 7e-17 UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 91 7e-17 UniRef50_Q31JI7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 91 7e-17 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 91 7e-17 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 91 8e-17 UniRef50_Q07ZF0 Diguanylate cyclase n=21 Tax=Shewanella RepID=Q0... 91 8e-17 UniRef50_A0Q1G3 Diguanylate cyclase/phosphodiesterase domain 2 n... 91 8e-17 UniRef50_Q3A9C3 GGDEF domain protein n=2 Tax=cellular organisms ... 91 9e-17 UniRef50_B8CQ67 GGDEF domain protein n=1 Tax=Shewanella piezotol... 91 9e-17 UniRef50_D1UBY9 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 91 1e-16 UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteria... 91 1e-16 UniRef50_C6WY37 Diguanylate cyclase n=1 Tax=Methylotenera mobili... 91 1e-16 UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 91 1e-16 UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium... 91 1e-16 UniRef50_Q4ZZ43 PAS:GGDEF n=17 Tax=Bacteria RepID=Q4ZZ43_PSEU2 91 1e-16 UniRef50_B8G2F8 Diguanylate cyclase n=2 Tax=Desulfitobacterium h... 91 1e-16 UniRef50_B8GME9 Putative diguanylate cyclase n=1 Tax=Thioalkaliv... 91 1e-16 UniRef50_B6ESW5 Membrane associated GGDEF protein n=1 Tax=Aliivi... 91 1e-16 UniRef50_B9R0D3 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 91 1e-16 UniRef50_B6BJE3 GGDEF domain protein n=1 Tax=Campylobacterales b... 91 1e-16 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 91 1e-16 UniRef50_B3E241 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 91 1e-16 UniRef50_B2V8X7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 91 1e-16 UniRef50_B6FK08 Putative uncharacterized protein n=1 Tax=Clostri... 90 2e-16 UniRef50_A4BQ62 Response regulator n=1 Tax=Nitrococcus mobilis N... 90 2e-16 UniRef50_A1HSJ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 90 2e-16 UniRef50_Q3A5K1 Two component signal transduction response regul... 90 2e-16 UniRef50_Q1IRY3 Diguanylate cyclase n=1 Tax=Candidatus Koribacte... 90 2e-16 UniRef50_C9Y9D6 Putative uncharacterized protein n=1 Tax=Curviba... 90 2e-16 UniRef50_A4TQK3 HmsT protein n=39 Tax=Enterobacteriaceae RepID=A... 90 2e-16 UniRef50_A9C2G6 Diguanylate cyclase n=2 Tax=cellular organisms R... 90 2e-16 UniRef50_C9NTT1 GGDEF family protein n=6 Tax=Vibrio RepID=C9NTT1... 90 2e-16 UniRef50_C5JAW9 Diguanylate cyclase n=1 Tax=uncultured bacterium... 90 2e-16 UniRef50_A1SZ67 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 90 2e-16 UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4... 90 2e-16 UniRef50_A4VN66 GGDEF domain protein n=1 Tax=Pseudomonas stutzer... 90 2e-16 UniRef50_UPI00016982CA diguanylate cyclase n=1 Tax=Endoriftia pe... 90 2e-16 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 90 2e-16 UniRef50_A8G0E2 Diguanylate cyclase n=1 Tax=Shewanella sediminis... 90 2e-16 UniRef50_Q3ADI8 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 90 2e-16 UniRef50_C5SCC9 Diguanylate cyclase n=1 Tax=Allochromatium vinos... 90 2e-16 UniRef50_A5IN19 Diguanylate cyclase n=5 Tax=Thermotogaceae RepID... 89 3e-16 UniRef50_C5EJU6 Response regulator pleD n=1 Tax=Clostridiales ba... 89 3e-16 UniRef50_D0KZW3 Response regulator receiver modulated diguanylat... 89 3e-16 UniRef50_Q7MFB4 GGDEF family protein n=2 Tax=Vibrio vulnificus R... 89 3e-16 UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geob... 89 3e-16 UniRef50_UPI0001C35996 diguanylate cyclase/phosphodiesterase wit... 89 3e-16 UniRef50_D0KYN2 Diguanylate cyclase n=1 Tax=Halothiobacillus nea... 89 3e-16 UniRef50_C4UJR8 Diguanylate cyclase n=4 Tax=Enterobacteriaceae R... 89 3e-16 UniRef50_B2A7Y1 Diguanylate cyclase and metal dependent phosphoh... 89 3e-16 UniRef50_A8F535 Diguanylate cyclase n=1 Tax=Thermotoga lettingae... 89 3e-16 UniRef50_Q2BPL4 Signal transduction histidine kinase n=1 Tax=Nep... 89 3e-16 UniRef50_C0FUN6 Putative uncharacterized protein n=1 Tax=Rosebur... 89 3e-16 UniRef50_C6MBM6 Diguanylate cyclase n=1 Tax=Nitrosomonas sp. AL2... 89 4e-16 UniRef50_B8HS15 Diguanylate cyclase with GAF sensor n=5 Tax=Bact... 89 4e-16 UniRef50_C9RA00 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 89 4e-16 UniRef50_Q1ZLF7 Putative uncharacterized protein n=4 Tax=Photoba... 89 4e-16 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 89 4e-16 UniRef50_B4U5Q5 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp.... 89 5e-16 UniRef50_A3ZRB0 Putative uncharacterized protein n=1 Tax=Blastop... 89 5e-16 UniRef50_Q6ARU5 Putative uncharacterized protein n=1 Tax=Desulfo... 89 5e-16 UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteria... 89 5e-16 UniRef50_Q72KK2 Putative response regulator n=1 Tax=Thermus ther... 89 5e-16 UniRef50_A0L4P1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 89 5e-16 UniRef50_A7HJ20 Diguanylate cyclase n=1 Tax=Fervidobacterium nod... 89 5e-16 UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfoc... 89 6e-16 UniRef50_B5YAD1 Ggdef domain protein n=2 Tax=Dictyoglomus RepID=... 89 6e-16 UniRef50_Q5PLI4 Cellulose synthesis regulatory protein n=77 Tax=... 89 6e-16 UniRef50_C7RL44 Diguanylate cyclase n=1 Tax=Candidatus Accumulib... 88 6e-16 UniRef50_B0TAR1 Putative uncharacterized protein n=1 Tax=Helioba... 88 6e-16 UniRef50_C4XU30 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 88 6e-16 UniRef50_B5W7J6 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 88 6e-16 UniRef50_Q0W2L1 Putative signal transduction protein n=1 Tax=unc... 88 6e-16 UniRef50_A4XHJ0 Diguanylate cyclase n=3 Tax=Bacteria RepID=A4XHJ... 88 6e-16 UniRef50_C1SP05 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 88 6e-16 UniRef50_D0XBU8 Putative uncharacterized protein n=1 Tax=Vibrio ... 88 7e-16 UniRef50_C5T000 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 88 7e-16 UniRef50_A8GB07 Diguanylate cyclase n=7 Tax=Enterobacteriaceae R... 88 7e-16 UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 88 7e-16 UniRef50_A6VUN1 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 88 7e-16 UniRef50_Q2SP63 Response regulator containing a CheY-like receiv... 88 7e-16 UniRef50_Q3Z0N3 Cellulose synthesis regulatory protein n=28 Tax=... 88 7e-16 UniRef50_B0VJW7 Putative uncharacterized protein n=1 Tax=Candida... 88 7e-16 UniRef50_B9K8R4 Diguanylate cyclase n=4 Tax=Thermotogaceae RepID... 88 8e-16 UniRef50_C9RRQ1 Diguanylate cyclase n=1 Tax=Fibrobacter succinog... 88 8e-16 UniRef50_D0I9J2 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 88 8e-16 UniRef50_B1LCR1 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 88 9e-16 UniRef50_C1M322 Inner membrane protein yeaI n=1 Tax=Citrobacter ... 88 9e-16 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 88 9e-16 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 88 9e-16 UniRef50_B9K9D5 PleD-related protein n=1 Tax=Thermotoga neapolit... 88 9e-16 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 88 9e-16 UniRef50_A4BIU7 Response regulator containing a CheY-like receiv... 88 9e-16 UniRef50_B7IG95 Ggdef domain protein n=1 Tax=Thermosipho african... 88 9e-16 UniRef50_C6HZ09 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 88 9e-16 UniRef50_Q2LRV5 Sensory box/GGDEF family protein n=1 Tax=Syntrop... 88 1e-15 UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniiba... 88 1e-15 UniRef50_Q5SK54 GGDEF domain protein n=3 Tax=Thermus RepID=Q5SK5... 87 1e-15 UniRef50_A1SVZ1 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 87 1e-15 UniRef50_A3QI98 Diguanylate cyclase n=1 Tax=Shewanella loihica P... 87 1e-15 UniRef50_A8F8N3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 87 1e-15 UniRef50_C5V083 Response regulator receiver modulated diguanylat... 87 1e-15 UniRef50_Q1IVB0 Diguanylate cyclase with GAF sensor n=1 Tax=Cand... 87 1e-15 UniRef50_B3PBW6 GGDEF domain protein n=1 Tax=Cellvibrio japonicu... 87 1e-15 UniRef50_A1U6N7 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 87 1e-15 UniRef50_A0LW67 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 87 1e-15 UniRef50_Q7P0N5 Putative uncharacterized protein n=1 Tax=Chromob... 87 1e-15 UniRef50_B1JAK9 Diguanylate cyclase with GAF sensor n=1 Tax=Pseu... 87 1e-15 UniRef50_B5Y6T7 Ggdef domain protein n=1 Tax=Coprothermobacter p... 87 1e-15 UniRef50_Q07Y51 Diguanylate cyclase n=2 Tax=Alteromonadales RepI... 87 1e-15 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 87 1e-15 UniRef50_A0QK38 Diguanylate cyclase n=2 Tax=Mycobacterium avium ... 87 1e-15 UniRef50_Q30W44 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desul... 87 1e-15 UniRef50_A8F806 Diguanylate cyclase n=1 Tax=Thermotoga lettingae... 87 1e-15 UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 87 1e-15 UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 87 1e-15 UniRef50_C9RCA9 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 87 1e-15 UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=As... 87 1e-15 UniRef50_B8KUK1 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 87 2e-15 UniRef50_Q4KIW6 Response regulator/GGDEF domain protein n=22 Tax... 87 2e-15 UniRef50_B0TNJ9 Diguanylate cyclase n=4 Tax=Shewanella RepID=B0T... 87 2e-15 UniRef50_A3DDM3 Diguanylate cyclase n=3 Tax=Clostridium thermoce... 87 2e-15 UniRef50_B9LE84 Diguanylate cyclase n=2 Tax=Chloroflexus RepID=B... 87 2e-15 UniRef50_C6PSR9 Diguanylate cyclase n=1 Tax=Clostridium carboxid... 87 2e-15 UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (... 87 2e-15 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 87 2e-15 UniRef50_B4S1M7 GGDEF domain protein n=1 Tax=Alteromonas macleod... 87 2e-15 UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingo... 87 2e-15 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 87 2e-15 UniRef50_Q747B1 GGDEF domain/HAMP domain protein n=1 Tax=Geobact... 87 2e-15 UniRef50_A1HS81 Response regulator receiver modulated diguanylat... 87 2e-15 UniRef50_C9LV04 Putative sensory box-containing diguanylate cycl... 87 2e-15 UniRef50_A4BSX0 Putative diguanylate cyclase n=1 Tax=Nitrococcus... 87 2e-15 UniRef50_A0L7G7 Response regulator receiver modulated diguanylat... 87 2e-15 UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 87 2e-15 UniRef50_Q2YBC6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitro... 87 2e-15 UniRef50_A6FCH2 GGDEF domain protein n=1 Tax=Moritella sp. PE36 ... 87 2e-15 UniRef50_C6XL77 Response regulator receiver modulated diguanylat... 87 2e-15 UniRef50_Q7P1K5 Putative uncharacterized protein n=1 Tax=Chromob... 87 2e-15 UniRef50_C9QKN1 GGDEF family protein n=2 Tax=Vibrio RepID=C9QKN1... 87 2e-15 UniRef50_Q1Z5A2 Putative uncharacterized protein n=3 Tax=Photoba... 87 2e-15 UniRef50_B1LB97 Diguanylate cyclase n=2 Tax=Thermotoga RepID=B1L... 87 2e-15 UniRef50_A0LCM0 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 87 2e-15 UniRef50_Q1N062 PAS:GGDEF protein n=1 Tax=Bermanella marisrubri ... 87 2e-15 UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 87 2e-15 UniRef50_B9QU21 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 86 2e-15 UniRef50_Q0AG61 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 2e-15 UniRef50_A6Q588 Two-component response regulator n=1 Tax=Nitrati... 86 2e-15 UniRef50_Q2BLE7 Putative uncharacterized protein n=1 Tax=Neptuni... 86 2e-15 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 86 2e-15 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 86 2e-15 UniRef50_A1K2R0 GGDEF/PAS/PAC-domain containing protein n=1 Tax=... 86 2e-15 UniRef50_Q1NX84 GGDEF:GAF n=3 Tax=delta proteobacterium MLMS-1 R... 86 2e-15 UniRef50_A4VN31 Sensory box protein n=3 Tax=Proteobacteria RepID... 86 2e-15 UniRef50_B9L7P4 Diguanylate cyclase/phosphodiesterase domain 1 n... 86 2e-15 UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain prote... 86 2e-15 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 86 2e-15 UniRef50_Q2BKT0 Sensory box/GGDEF domain/EAL domain protein n=1 ... 86 2e-15 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 86 2e-15 UniRef50_D1B7B3 Diguanylate cyclase n=1 Tax=Thermanaerovibrio ac... 86 3e-15 UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID... 86 3e-15 UniRef50_B1G121 Diguanylate cyclase n=4 Tax=Burkholderia RepID=B... 86 3e-15 UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED1... 86 3e-15 UniRef50_A9VWI8 Diguanylate cyclase n=2 Tax=Methylobacterium ext... 86 3e-15 UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=... 86 3e-15 UniRef50_B0SIV5 GGDEF domain receiver component of a two-compone... 86 3e-15 UniRef50_C5BTH6 Response regulator receiver domain protein n=1 T... 86 3e-15 UniRef50_A8F6M9 Diguanylate cyclase n=1 Tax=Thermotoga lettingae... 86 3e-15 UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepI... 86 3e-15 UniRef50_C4XIT4 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 86 3e-15 UniRef50_A8SWL2 Putative uncharacterized protein n=1 Tax=Coproco... 86 3e-15 UniRef50_B0S9C7 Two-component response regulator n=2 Tax=Leptosp... 86 3e-15 UniRef50_A6AWI3 VbsG n=1 Tax=Vibrio harveyi HY01 RepID=A6AWI3_VIBHA 86 3e-15 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 86 3e-15 UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Nep... 86 3e-15 UniRef50_D1C1N0 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 3e-15 UniRef50_Q2BKU0 Sensory box protein n=1 Tax=Neptuniibacter caesa... 86 3e-15 UniRef50_B8FWQ0 Diguanylate cyclase n=2 Tax=Desulfitobacterium h... 86 3e-15 UniRef50_Q31E96 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 86 3e-15 UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobiu... 86 3e-15 >UniRef50_P76237 Uncharacterized protein yeaJ n=99 Tax=Enterobacteriaceae RepID=YEAJ_ECOLI Length = 496 Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust. Identities = 496/496 (100%), Positives = 496/496 (100%) Query: 1 MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSI 60 MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSI Sbjct: 1 MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSI 60 Query: 61 AAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTI 120 AAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTI Sbjct: 61 AAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTI 120 Query: 121 VEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN 180 VEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN Sbjct: 121 VEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN 180 Query: 181 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI 240 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI Sbjct: 181 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI 240 Query: 241 NKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVS 300 NKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVS Sbjct: 241 NKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVS 300 Query: 301 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP 360 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP Sbjct: 301 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP 360 Query: 361 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI 420 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI Sbjct: 361 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI 420 Query: 421 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA 480 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA Sbjct: 421 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA 480 Query: 481 SDERLYVNKQNKNSRS 496 SDERLYVNKQNKNSRS Sbjct: 481 SDERLYVNKQNKNSRS 496 >UniRef50_UPI0001A43649 putative diguanylate cyclase n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A43649 Length = 494 Score = 294 bits (752), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 172/497 (34%), Positives = 268/497 (53%), Gaps = 23/497 (4%) Query: 11 FIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAA 70 I A L ++ L E+ R + Y+ Y+ + S+ +++ NQ+IA + RA Sbjct: 1 MIVACTTALFTALLFHEV----RNLQNYMGYVAENGKSALFHEESINQNIATRLSRAFF- 55 Query: 71 EQSEVSPEQRR-----AICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAA 125 S SP+ IC+ E+ + G NL A L GT QT +T C+ Sbjct: 56 --SRTSPDNHTDAEVAEICQHVETEGSISGFNLVAKTMNNLEGTFQTLNTSCEEWGRDIG 113 Query: 126 LLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQ 185 L + + + + A + YY+DL+ Y+Y VN + NNW + Sbjct: 114 ALSVIHRTESDALPKYSFSNYTDYAFKNIRYYIDLSHNYIYINRRVNTRNYTFNNW-LVN 172 Query: 186 SGS----------IGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGI 235 +GS I ID ++ + G ++S IYQD TK N++S+LTPV+++ ++KGI Sbjct: 173 NGSRINIARSAHTITIDDNALDDLIRGENIVSHIYQDGYTKNNIISMLTPVFLSDKVKGI 232 Query: 236 VLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPG 295 ++ D+N N+L F T DRPLLW+FL++ +TD +G +II ++ F +++ + Sbjct: 233 LITDVNINDLVVSFKTVDRPLLWKFLSLYVTDNATGANIIFHKPSIKSFDLINHDDTITQ 292 Query: 296 GIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNR 355 + + +D +Y I ++ VLF+ L IL + + +SR+N++DAMTGLYNR Sbjct: 293 YYTLHVKLDAIYVIIANIWLVLFYALITWILCRYASKQLKRQELLSRDNVTDAMTGLYNR 352 Query: 356 KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK 415 KI+TPELEQ+ + LV V IAID D LK+IND+LGH GD AI L A+ +IRK Sbjct: 353 KIITPELEQKTRTLVGRNIPVTVIAIDSDGLKRINDSLGHHMGDKAIQYLGSALGNAIRK 412 Query: 416 SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLH 475 SDY IRLGGDEFC++L+D + + + R ++ L I +K + FS G + + + DTL Sbjct: 413 SDYGIRLGGDEFCLVLIDYSLTKSRDVIARAQEYLLTIDKEKLVAFSWGAHQLHQGDTLE 472 Query: 476 DAYKASDERLYVNKQNK 492 A +DE LY +K++K Sbjct: 473 VAMLKADELLYQHKRSK 489 >UniRef50_B5Y6W9 Ggdef domain protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6W9_COPPD Length = 1059 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 64/154 (41%), Positives = 93/154 (60%), Gaps = 2/154 (1%) Query: 342 RENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLA 401 R +DA+TGL+NR L + +SG S I +D+D LK INDTLGH GD Sbjct: 901 RYGTNDALTGLFNRNFGLEVLNRLWSDYERSGRSFSVIFMDVDNLKNINDTLGHPVGDQV 960 Query: 402 ITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGF 461 + +A +K+ +R+SD+A+R GGDEF +IL+ S Q A ++ ERIE L + +P +G Sbjct: 961 LREVAFGLKKHLRQSDFAVRWGGDEFLVILLQSDEQGAQKVAERIEMELAN-SPMP-VGL 1018 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S GI KE TL + + SD R+Y+ K++K +R Sbjct: 1019 SYGIVEAKEVLTLEELLRTSDARMYLQKRSKKTR 1052 >UniRef50_A6CUQ3 Putaitive GGDEF domain n=1 Tax=Vibrio shilonii AK1 RepID=A6CUQ3_9VIBR Length = 456 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 147/311 (47%), Gaps = 49/311 (15%) Query: 203 RTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLN 262 R V+S IY+D T + V+++ +PVY + G D+N + Y P L+ Sbjct: 173 RIVVSDIYRDNVTNKTVITISSPVYDEFGMVG----DVNAD-----VYLDKFPFLYNKQY 223 Query: 263 VTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGI--RVSLSIDILY---FITSSWKSVL 317 + T ++ GR+III ED + + H + R+S+ I Y + S W + Sbjct: 224 FS-TRSEIGREIII---EDTRYPFHQSAHAERTQVDDRLSIVYKIPYSKIVVDSLW---I 276 Query: 318 FWILTALILLNMVRMHFRLYQNVSRENIS--------DAMTGLYNRKILTPE-LEQRLQK 368 ++ + AL ++R+ V RE + D +TGLYNR IL ++ ++K Sbjct: 277 YFSMVALFFYVVIRLD---ELKVKREKLKLAELAIKLDELTGLYNRAILRDSGIKYAIEK 333 Query: 369 LVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFC 428 + I ID DKLK IND GH GD AI +AQ ++Q R+SDY IR GGDEF Sbjct: 334 -----KGLAVIVIDGDKLKLINDNYGHHVGDEAIVYIAQCMRQCFRESDYLIRSGGDEFL 388 Query: 429 IILVDSTPQIAAQLPERIEKRLQHIAPQKEIG-------FSSGIYAMKENDTLHDAYKAS 481 ++L P Q ER+ L K G S G+ ++E ++L A K + Sbjct: 389 VLL----PGCGLQTAERLANTLSRTIRSKTYGANKLTLDISLGVTVLQEKESLSSAIKRA 444 Query: 482 DERLYVNKQNK 492 D LY K+NK Sbjct: 445 DALLYQVKRNK 455 >UniRef50_D0YXF8 Putative two-component response regulator and GGDEF family protein YeaJ n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YXF8_LISDA Length = 517 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 126/506 (24%), Positives = 217/506 (42%), Gaps = 42/506 (8%) Query: 4 HHRMLRHFIAASVIVL-TSSFLIFELVASD--RAMSAYLRYI---VQKADSSFLYDKYQN 57 HH + + ++ V+ +S LI L+A + R + A YI ++ SS + Y+N Sbjct: 17 HHFLFKSKTWHNIFVVGINSLLIIGLIAFNLYRQIDANKNYIDSNLKLVKSSMMTLAYRN 76 Query: 58 QSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDC 117 A V + L + + + + S N G N + L G+L Sbjct: 77 DRYAQTVTKTL--KDVSIMSQPGLVSINTYPSMNE-FGFNRGIYPDNLLNGSLIGVGKPS 133 Query: 118 DTIVEAAALLPAFDQA-VEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYF 176 + I L D E +R Y +YY+ RY Y ++ F Sbjct: 134 EAIYHDTNLFQILDDLWAEQHRRNITYN----------YYYISHQHRYFYLSSKYSLNDF 183 Query: 177 AMNNWSFLQSGSIGIDRKDIEKVFTGRT--VLSSIYQDQRTKQNVMSLLTPVYVAGQLKG 234 M F + R D+++ T + + Y+D T V+++ +PV+ A K Sbjct: 184 NMTK-DFFTTDFYSQQRSDLQQESTLKKGFYFTPPYRDFFTHDMVITIKSPVFSA---KD 239 Query: 235 IVLLDIN-----KNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSY 289 I++ D+ K+ +R I +D ++LN+ L D + I + + + +++ Sbjct: 240 IIIGDVGVDIPVKSLMRAITLPND---FKQYLNIYLYDDIKKQTITLYDGKRSYLPWINM 296 Query: 290 VHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLN----MVRMHFRLYQNVSRENI 345 + + + I Y + SS + + I+ +I LN +++MH E Sbjct: 297 NRQINDTLSIHAEISSWYILYSSIQDISL-IIVLIIALNYMYSLLKMHKAQKNEYKIEAY 355 Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D++TGLYNR+I+ + LQ+ + S V FI ID + K IND GH GD+A+ + Sbjct: 356 TDSLTGLYNRRIIKSSVMPLLQEAKDTHSPVSFIIIDANDFKIINDNYGHDVGDMALKHI 415 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI---APQKEIGFS 462 A I R SD IRLGGDEFCI+L ++T A L R+E + I + + + Sbjct: 416 ANQIFALSRSSDICIRLGGDEFCIVLPNTTIGQAHSLSRRLELAVYGIKFYSQKITTTIT 475 Query: 463 SGIYAMKENDTLHDAYKASDERLYVN 488 + +TL + + +D+ LY N Sbjct: 476 TSCVQYDGEETLEETFARADKILYNN 501 >UniRef50_A5N8E8 Putative uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5N8E8_CLOK5 Length = 454 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 87/150 (58%), Gaps = 2/150 (1%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D MTG+ NR+ LE+ L + + + +D+D LK+INDT GH EGD I + Sbjct: 301 TDCMTGVLNRRTGLMTLERELSLVCKGDRPLSVCFVDVDGLKKINDTYGHVEGDWVINFI 360 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGI 465 I+ +RK+D R+GGDEF II D + A ++ ERI RL+H + FS GI Sbjct: 361 VSNIELMVRKTDTVSRMGGDEFLIIFPDCCEEDAEKIIERICCRLKHHKKPFKCSFSYGI 420 Query: 466 YAMKEND--TLHDAYKASDERLYVNKQNKN 493 + ++ +++D KASDE++Y NK +KN Sbjct: 421 IEITKDSKFSVNDVIKASDEKMYKNKLSKN 450 >UniRef50_C9QJS4 Putative two-component response regulator and GGDEF family protein YeaJ n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QJS4_VIBOR Length = 471 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%) Query: 201 TGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRF 260 + R ++SSIY D T ++L +PV G++ G + DI D +L + Sbjct: 176 SDRLLVSSIYNDTITGSKTITLSSPVIDQGKVIGDISADI----------YFDMSILAQE 225 Query: 261 LNVTLTDTDSGRDIIINQSEDNLFQYV---SYVHDLPGGIRVSLSIDILYFITSSWKSVL 317 +++ D I ++ + + + SYV D + L I L T + Sbjct: 226 ASISSRDQGGMNYIYVDYPQYPMGELSFRSSYVIDNKSTLVFELPISKLILDT-----LP 280 Query: 318 FWILTALILLNMVRMHFRLYQ-------NVSRENISDAMTGLYNRKIL-TPE-LEQRLQK 368 F++L+ +I L +H+ Y+ V E+ D MTGLYNRK+ TPE L L + Sbjct: 281 FFVLSLVISL-FATVHYMQYKIQKKRFSEVYEESNRDEMTGLYNRKVFSTPEFLSDTLNQ 339 Query: 369 LVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFC 428 ++ +AID +KLK INDT GH GD AI +A+A+K R +DY +R GGDEF Sbjct: 340 ------TIAILAIDGNKLKTINDTYGHHCGDAAIKHIAEAMKGVFRDTDYVVRSGGDEFL 393 Query: 429 IILVDSTPQIAAQLPERIEKRL--QHIAP-QKEIGFSSGIYAMKENDTLHDAYKASDERL 485 +IL +L E+++K + + + P E+ S GI + + L A A+DE L Sbjct: 394 VILPGCPTPRVMELKEKLKKEVARKKVRPYNMEVSVSVGIAFKRPEEELEYALIAADENL 453 Query: 486 YVNK 489 Y +K Sbjct: 454 YRDK 457 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/180 (32%), Positives = 98/180 (54%), Gaps = 8/180 (4%) Query: 325 ILLNMVRMHFRLYQNV---SRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 +LL VR R + + + +D +TGLYNR+ + ++ L+++ ++ + FI + Sbjct: 111 VLLARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQRELERVQRNETDASFIIL 170 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K++ND GH GD + LA+ K++ RK D R GG+EF I L D+ + A Sbjct: 171 DIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKVDLCCRFGGEEFVICLPDTDTEGALL 230 Query: 442 LPERIEKRLQHIAPQKEIG-----FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + ER K+++ ++ E G S G+ + EN TL D K +D+ LY KQN +R+ Sbjct: 231 VAERTRKKVEELSFNTEKGPLHVTISLGVSSANENTTLEDMLKRADDALYQAKQNGRNRT 290 >UniRef50_Q4FF43 Sensory box histidine kinase n=5 Tax=Thermotoga RepID=Q4FF43_THESQ Length = 449 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 87/152 (57%), Gaps = 7/152 (4%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D++TGL+NR ++ +++K + FI ID+D KQINDT GH GD + +A Sbjct: 271 DSLTGLFNRAFFNEWIQDQVRKAQFQNVPLSFIMIDVDNFKQINDTYGHLTGDKVLRFVA 330 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIG----FS 462 + I SIR SD+A+R GGDEF ++L +++ Q A Q+ RI +++++ E+G S Sbjct: 331 RCISDSIRSSDFAVRYGGDEFLVVLYNTSKQQAEQVASRIREKIRN---SDELGVDVDIS 387 Query: 463 SGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 G+ +K D + +DE +Y K+ + S Sbjct: 388 YGVAELKPGDNYLKFLQKADEEMYGMKRERKS 419 >UniRef50_A7HLS0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HLS0_FERNB Length = 538 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/160 (38%), Positives = 88/160 (55%), Gaps = 6/160 (3%) Query: 333 HFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDT 392 F Q + + D +TGLYNR+ L+ +++ + G+ + ID+D LKQINDT Sbjct: 361 KFYYVQKLEEASFKDPLTGLYNRRYFMIMLKNEIRRAKRYGTKSSVMMIDLDGLKQINDT 420 Query: 393 LGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL----VDSTPQIAAQLPERIEK 448 GH +GDLAI LAQA+ S R +D R GGDEF I+L VD I +L E +EK Sbjct: 421 FGHDKGDLAIKTLAQAMISSTRVTDVCARFGGDEFAILLPQTPVDKAQVIVYRLKETLEK 480 Query: 449 RLQHIAPQKEIGFSSGIYAM--KENDTLHDAYKASDERLY 486 + +I FS+GI ++ ++D + K +DE LY Sbjct: 481 FNSESTEKFKIHFSAGITSIIKADDDEGINTLKRADELLY 520 >UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUF5_9AQUI Length = 283 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 50/152 (32%), Positives = 91/152 (59%), Gaps = 1/152 (0%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D++TG YNR+ + L + +++ + G+ + + ID+D K++NDT GH+ GD + + Sbjct: 129 TDSLTGFYNRRKIEEILAKEIERSRRYGNPLSVLFIDVDNFKELNDTYGHKSGDEVLRKI 188 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-PQKEIGFSSG 464 A+ IK +R++DY R GG+EF +IL ++ Q A ++ ERI KR++ ++ S G Sbjct: 189 AEIIKSELRRTDYVGRFGGEEFMVILPETDSQSALRVAERIRKRVEREDFKTGKVTVSVG 248 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + +KE D L+ + D +Y+ K+ +RS Sbjct: 249 VTELKEGDDLNTLFNRVDRAMYLAKERGKNRS 280 >UniRef50_C8W0S4 Diguanylate cyclase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W0S4_DESAS Length = 381 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 104/183 (56%), Gaps = 3/183 (1%) Query: 314 KSVLFW--ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQ 371 K+V+ + I+ +L+L+ + + F L + + D +TGL+NR+ L++ L++ + Sbjct: 190 KTVVLYNAIIVSLLLICSI-LFFYLIDKLRKGVGIDTLTGLWNRQFFHVNLQEELERTNR 248 Query: 372 SGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL 431 +G+ ID+D K+INDT GH GD+A+ +A ++Q++R+ D +R GG+EF I+ Sbjct: 249 TGNPTSLAIIDVDNFKKINDTFGHLAGDVALKKIANTLRQNVRRIDTVVRWGGEEFAIVF 308 Query: 432 VDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 ++ + A ++ ERI K ++ I +I S G+ + L + +D+ LY K+ Sbjct: 309 SNADIETAYEVVERIRKSVEAIEFMCQITISIGLSSTNLTTNLDELVHVADKALYRAKET 368 Query: 492 KNS 494 KN+ Sbjct: 369 KNT 371 >UniRef50_Q2RGJ9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGJ9_MOOTA Length = 275 Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 14/184 (7%) Query: 322 TALILLNMVRMHFRLYQ---NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 T L+L +M+ M L Q RE SD +TGLYNR+ E L++ + S M Sbjct: 91 TFLVLYSMMLMIMELVQASCRYQREAESDPLTGLYNRRTFFASAESVLKEAREGKRSPML 150 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 +D+D +K+INDT GHQ GD A+ +AQAI++S+++ D R GGDEF I+ P++ Sbjct: 151 AILDLDNMKKINDTWGHQYGDEALKRVAQAIQKSVQEGDVTARYGGDEFVILFPGKGPRL 210 Query: 439 AAQLPERIEKRLQHI---APQKEIGFSSGIYAM----KENDTLHDAYKASDERLYVNKQN 491 L R++K LQ + + + S G+ K+ DTL +D R+Y +K+ Sbjct: 211 ET-LRARLKKHLQALRLSGAEIPLSLSVGLARFPADGKDVDTL---LAVADARMYADKEG 266 Query: 492 KNSR 495 K R Sbjct: 267 KKGR 270 >UniRef50_Q2RGK1 Diguanylate cyclase (GGDEF domain) n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGK1_MOOTA Length = 272 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 110/199 (55%), Gaps = 17/199 (8%) Query: 309 ITSSWKSVLFWIL-----TALILLNM--VRMHFRLYQ-NVSRENISDAMTGLYNRKILTP 360 + SW +L ++ TA+ +L M + + F L + +E ++D +TGLYNR+ Sbjct: 66 LPESWGRILGDLVLVNAGTAVTILAMYFLTLKFHLVALALKKEAVTDPLTGLYNRRTFFR 125 Query: 361 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI 420 EL+ RL++ G S +D+D +KQINDTLGHQ GD + A+A+K++ R+ D A Sbjct: 126 ELDCRLER----GGSFAVAVLDLDNMKQINDTLGHQIGDEVLRAAARALKKATREKDIAA 181 Query: 421 RLGGDEFCIILVDSTPQI---AAQLPERIEKRLQHIAPQKEIGFSSGI-YAMKENDTLHD 476 R GGDEF ++ P++ A+L E + L + + E+G S+G+ Y ++ + Sbjct: 182 RYGGDEFVVLFAGKGPRVEKFKARLKENLMAELPYTG-EIEVGLSTGVAYCPEDGEDARS 240 Query: 477 AYKASDERLYVNKQNKNSR 495 A+D R+Y K+ K +R Sbjct: 241 LLSAADARMYAEKEAKKNR 259 >UniRef50_B5YGD8 Sensory box/ggdef domain protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGD8_THEYD Length = 414 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 98/174 (56%), Gaps = 10/174 (5%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L + +++ +LY + +I+D++TG+YNR+ LE+ + ++ G+S I D+D L Sbjct: 238 LELQKINKKLY----KASITDSLTGIYNRRFFFQRLEEEYARTLRYGNSFCLILFDLDNL 293 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K+INDT GH EGD I L A+ +K + RK D A R+GGDEF I + ++ + A + ERI Sbjct: 294 KKINDTFGHPEGDRLIKLFAKILKTNKRKEDIAARIGGDEFGCIFIGASLEGAKKTAERI 353 Query: 447 EKRLQHIAPQKEIGFSSGIYAMKENDTL------HDAYKASDERLYVNKQNKNS 494 ++ L+ + + S + + + + D +K D+ L+ K+ +++ Sbjct: 354 KEELKKRYKKAPVSVSGALCCIGKGELFKFYKNYKDFFKELDKGLFKAKKIRDT 407 >UniRef50_C8R031 Diguanylate cyclase with GAF sensor n=2 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R031_9DELT Length = 493 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 92/170 (54%), Gaps = 10/170 (5%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 RL++NV +E + D +TG+YNR+ E+ L K + +S+ + ID+D K +ND G Sbjct: 189 RLFENVRKEAMHDGLTGIYNRRFFLECAERELHKCQRGSNSLSLLFIDIDHFKDVNDNFG 248 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL---- 450 H GD + LA+ ++ IR+SD R GG+EF ++L D+ + A L E++ ++ Sbjct: 249 HVFGDQVLRQLAKILQCGIRQSDIPARYGGEEFVVLLPDTNGEAACCLAEKLRSKVAEDL 308 Query: 451 ----QHIAPQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 H P K I + G+ + E+ T+ D + +D RLY K+ +R Sbjct: 309 VATPPHEQP-KTINLTVGVASYPEDGKTVIDLLRVADRRLYKGKEEGRNR 357 >UniRef50_O67439 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O67439_AQUAE Length = 236 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 86/155 (55%), Gaps = 1/155 (0%) Query: 343 ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAI 402 E D +TGL+NR L + Q+ G V F+ ID+D K++ND GH EGD + Sbjct: 38 EATHDPLTGLFNRTALQQLFKYEKQRADVLGKKVAFLFIDLDNFKEVNDRYGHAEGDRVL 97 Query: 403 TLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFS 462 +A+ I++SIR +D A+R+GGDEF IIL +S + A ++ ERI+ ++ I S Sbjct: 98 KDIARIIRESIRGTDIAVRIGGDEFLIILPNSNIETAKRVGERIKNAIEETFKDYGISAS 157 Query: 463 SGIYAM-KENDTLHDAYKASDERLYVNKQNKNSRS 496 GI E +TL + +D R+Y K+ K ++ Sbjct: 158 YGISIYPNEGETLEELINLADSRMYQMKREKKLKT 192 >UniRef50_B5JWB1 Gaf/ggdef-domain containing protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JWB1_9GAMM Length = 332 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 4/159 (2%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 R Q E +DA+TGL NR+ + + + G+ + A+D+D LK+IND G Sbjct: 169 RALQKSQEEAATDALTGLKNRRGWDAAVLNEEARAKRYGNPIAIFAVDIDCLKEINDEQG 228 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GD IT A+A+KQ +R+SD R+GGDEFCI+ ++ + +++ K+L+H Sbjct: 229 HAAGDALITRAAEALKQVVRESDTLARIGGDEFCILALECDEDDS----QKLMKKLRHTL 284 Query: 455 PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKN 493 Q E+ S G + L A K +DE +Y NK+ ++ Sbjct: 285 SQYEVKASIGSAIRQPKLGLQHAIKQADEAMYANKEARH 323 >UniRef50_C1SHV7 Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHV7_9BACT Length = 396 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 88/153 (57%), Gaps = 5/153 (3%) Query: 343 ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAI 402 E+I+D +T LYNRK + ++ + + + + +S + +D+D K +ND GH GD + Sbjct: 235 ESITDHLTSLYNRKYMDIKMTEEIDRYRRMNTSFCIMLVDIDYFKNVNDNYGHLIGDQVL 294 Query: 403 TLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-PQKEIGF 461 LA+ +K SIRK+D+A R GG+EF I+L + + A + E+I K+L+ KE F Sbjct: 295 KHLAKLLKDSIRKTDFAFRYGGEEFLIMLTNVDVRNATHVAEQIRKKLKETNFSLKENSF 354 Query: 462 ----SSGIYAMKENDTLHDAYKASDERLYVNKQ 490 S GI +++DT K +DERLY KQ Sbjct: 355 NVTASFGIALFEKDDTQESVIKRADERLYKAKQ 387 >UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Y8_SULSY Length = 492 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 97/162 (59%), Gaps = 5/162 (3%) Query: 338 QNVS-RENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 +NV+ ++ I+D +TGL+NR I+ ++ +++ ++ + + D+D K+INDT GH Sbjct: 326 KNVAEKKAITDKLTGLFNRSIIDTLIQVEIERAKRNNKPISILLFDIDHFKKINDTYGHD 385 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 +GD A+ +A+ ++++RKSDY +R GG+EF IL ++ A ++ E+I +++ Sbjct: 386 KGDYALKTIAEIARRTLRKSDYVLRWGGEEFLAILPETDLDGATKVAEKIRSNIEN-YNF 444 Query: 457 KEIG---FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 K+IG S G+ +K + L +A K +DE LY K +R Sbjct: 445 KDIGRVTVSIGVTMLKIGEPLDNAIKRADEALYAAKNKGRNR 486 >UniRef50_Q7MFJ4 GGDEF family protein n=2 Tax=Vibrio vulnificus RepID=Q7MFJ4_VIBVY Length = 451 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 40/306 (13%) Query: 203 RTVLSSIYQDQRTKQNVMSLLTPVY-------VAGQLKGIVLLDINKNNLRNIFYTHDRP 255 R V+S+IY D +N++S+ +PVY + G+ + D+ N+ I+ + Sbjct: 169 RAVVSTIYHDSDLGENLISVSSPVYSSEEENEIVGEYVFSLFYDLKDRNVETIYNQGFKT 228 Query: 256 LLWRFLNVTLTDTDSGRDIIINQSEDNLFQY------VSYVHDLPGGIRVSLSIDILYFI 309 L + L + I + +F Y + Y + + + LY Sbjct: 229 TLLTYNGYPLAKFAYTKTYIADNKTIFMFSYPLSKLVIDYSYLFFVFLLLFFVYLNLYEQ 288 Query: 310 TSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKL 369 + + K L VS E I D +TGL+NRKI L K Sbjct: 289 SKTRKQQL--------------------DEVSSEVIKDELTGLHNRKIFN----DTLFKD 324 Query: 370 VQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCI 429 S IAID D K INDT GH GD I + +++K + R+ D+ IR GGDEF Sbjct: 325 TLEDSQYTVIAIDGDGFKNINDTFGHHVGDEVICQVGKSMKATFRRGDFLIRTGGDEFLA 384 Query: 430 ILVDSTPQIAAQLPERIEKRLQH-IAPQKE--IGFSSGIYAMKENDTLHDAYKASDERLY 486 IL D + A++L ++++ L++ P K+ I S+G+ + +TL + +DE LY Sbjct: 385 ILPDCDHRKASELVGKLKQHLKNSTLPYKDLTIAVSAGVATRAQGETLQELMMQADEALY 444 Query: 487 VNKQNK 492 K+++ Sbjct: 445 KVKESR 450 >UniRef50_D1U9W6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9W6_9DELT Length = 366 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 6/167 (3%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 R+ + + R +D+MTG++NR + L + +SG + I +D+D K INDT G Sbjct: 177 RMIEEMCRLARTDSMTGMWNRGYFMELAGRELNRARRSGGELSLIMLDVDHFKAINDTHG 236 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI- 453 H GD+A+ LA+ I +S+R+ D A RLGG+EF ++L D++ + A + RI + ++ Sbjct: 237 HDVGDVALMELARVIGESVREVDVAARLGGEEFAVMLPDTSAEDACAVAVRIARTIRRAV 296 Query: 454 --APQKEIGF--SSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 +P+ + S G+ + +E+ D+L K SD LY K+N R Sbjct: 297 VDSPRGPVSMTVSMGLASFEESKDSLDSLLKYSDIALYAAKKNGRDR 343 >UniRef50_B5YCH7 Ggdef domain protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YCH7_DICT6 Length = 464 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 88/156 (56%), Gaps = 6/156 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TG+YN+++ ++ + + S + + +D+D LK++ND GH EGD+ I ++ Sbjct: 308 DPLTGVYNKRVGFEIFQKEMGLSLVRNSPLAVVFVDIDDLKKVNDNFGHNEGDVYIKIIT 367 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI----EKRLQHIAPQKEIGFS 462 +AIK++IRK+D R GGDEF +IL + A ++ E+I +K + + E FS Sbjct: 368 EAIKKNIRKTDTLFRFGGDEFVLILPHCDRETAERIIEKILVNLKKLREELNKPYEFSFS 427 Query: 463 SGI--YAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 GI + KE ++ D + +D ++Y K+ KN Sbjct: 428 YGIAVFYPKEGKSIDDLVREADMKMYEMKKTKNKEG 463 >UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilus RepID=Q5SHT9_THET8 Length = 360 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 2/161 (1%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 Y + +D +TGL NR+ L LE+ L +L + G + + +D+D K +ND GH+ Sbjct: 194 YMEAQLDAYTDFLTGLRNRRYLELILERELFRLQRYGRPLSLVLLDLDGFKAVNDLHGHE 253 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-- 454 GD + LAQ I+ +R+SD A+RLGG+EF ++L ++ A +L ER+ + ++ +A Sbjct: 254 VGDRVLQALAQRIEAHLRRSDRAVRLGGEEFALLLPETPLPQALRLAERLRRAVEAMAVP 313 Query: 455 PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 P I S G+ + DT + +DE +Y K+ +R Sbjct: 314 PVARITASFGVAEARPTDTPLTLLRRADEAMYRAKRKGKNR 354 >UniRef50_Q5NP17 Diguanylate cyclase with beta propeller sensor n=3 Tax=Zymomonas mobilis RepID=Q5NP17_ZYMMO Length = 1008 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 5/155 (3%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +TGL NR+ T E+ + ++ +D+D K+IND GH GD I + Sbjct: 851 TDELTGLLNRRAFTEMFEKNCAQFSKTKDQFSVFILDIDFFKKINDNEGHLAGDAVIQYI 910 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI-----EKRLQHIAPQKEIG 460 AQ I ++IR+ D+A R GG+EF I+L ++ + Q+ RI EK + + + + Sbjct: 911 AQKITENIRQQDFAARYGGEEFVIMLPNADMETTCQVASRIGNAISEKPVPYQGREIPVT 970 Query: 461 FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S G+ MKEND + + +DERLY+ K +R Sbjct: 971 VSIGVAVMKENDDANSLLERADERLYMAKNQGRNR 1005 >UniRef50_D0XGD0 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGD0_VIBHA Length = 447 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 121/213 (56%), Gaps = 24/213 (11%) Query: 291 HDLPGGIRVSL-SIDILYFITSSWKSVL--FWILTALILLNMVRMHFRLYQ-NVS-RENI 345 +DL GG+ + L ++ ++ + K ++ W+L L+ +VR + RLY N+ R+++ Sbjct: 237 YDLAGGLILPLDNVSVVIYQLPVVKVIIDNLWVL--LVTWFLVRTYHRLYSSNIKHRDHL 294 Query: 346 S--------DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + D +T LYNRK+ +Q + ++ G + I ID K KQINDT GH+ Sbjct: 295 AHAIKSASRDELTELYNRKVFE---DQDFEDALKDGHYSV-ILIDGKKFKQINDTYGHKA 350 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL----VDSTPQIAAQLPERIEKRLQHI 453 GDLA+ +A+ +K + R+SD+ IRLGGDEF +++ ++S ++AA L + I R + Sbjct: 351 GDLALIHIARMMKSTFRQSDWLIRLGGDEFVVVMPHCPLESAEELAANLRDSIAAR-PLV 409 Query: 454 APQKEIGFSSGIYAMKENDTLHDAYKASDERLY 486 E+G ++G+ +++L D + +D+ +Y Sbjct: 410 RYGIEVGVTTGVAKGTSDESLLDVIELADQDMY 442 >UniRef50_C6MKE8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter sp. M18 RepID=C6MKE8_9DELT Length = 486 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 7/165 (4%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI-DMDKLKQ 388 V H + + E+ DA+TGLYNR ELE +L Q M + + D++ LK Sbjct: 312 VTAHKEVEVALRHESTHDALTGLYNRAFFDEELE----RLAQGARFPMSVVMADVNGLKA 367 Query: 389 INDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 +ND LGH GD I + A+ I+ + R D R+GGDEF +IL ++ +A + RI Sbjct: 368 VNDALGHAAGDELIQMAARVIRHAFRTKDIVARIGGDEFAVILPETATSVARETVHRIMN 427 Query: 449 RLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKN 493 + + Q I F GI K+ D L D K SDER+Y K + Sbjct: 428 CPEVMDGQVSIAF--GIATAKDRDQLRDTLKLSDERMYREKSEQK 470 >UniRef50_B9L6Y1 Diguanylate cyclase n=1 Tax=Nautilia profundicola AmH RepID=B9L6Y1_NAUPA Length = 469 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 8/156 (5%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +T ++NR+ L + ++ K S + V I +D+D K+INDT GH GDL + L Sbjct: 312 DGLTEIFNRRFLEEKAKELFLKYKLSNTQVGIIMLDIDDFKKINDTYGHDTGDLVLISLV 371 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIIL----VDSTPQIAAQLPERIEKRLQHIAPQKEIGF- 461 IKQ IRK+D IR GG+EF IIL +++T +IA ++ + +EK HI K F Sbjct: 372 STIKQIIRKNDIFIRYGGEEFVIILPNSNIENTYKIAEKIRKEVEKIKIHIG-DKHFSFT 430 Query: 462 -SSGIYAM-KENDTLHDAYKASDERLYVNKQNKNSR 495 S GI + K++ ++++A K +D LY K+N +R Sbjct: 431 ISIGISEIHKDDSSIYEAIKRADINLYKAKRNGKNR 466 >UniRef50_Q053C7 Two-component response regulator-(Cyclic diguanylate (C-diGMP) effector molecule) n=4 Tax=Leptospira RepID=Q053C7_LEPBL Length = 409 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 12/170 (7%) Query: 338 QNVSRENIS--DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 +N+ E IS D +T LYNR+ L + E L++ + S+ I +DMD LK+IND+ GH Sbjct: 219 KNIHIEKISKVDELTKLYNRRYLIEQFELFLKRAQRYRFSLAMIILDMDYLKEINDSYGH 278 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI-----EKRL 450 GDLA+ ++ +KQ +R +D R+GGDEFCI+L QL E++ EK L Sbjct: 279 LAGDLALRTISDVMKQRVRATDICSRIGGDEFCILLDAIKKDDFVQLCEKLRMEVAEKEL 338 Query: 451 QHIAPQKE-----IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + P + + + I + E + D Y + D LY +K+ +R Sbjct: 339 SYRTPSGDPVKISVSIGACILSPMEEFSFDDIYHSIDSALYESKKKGRNR 388 >UniRef50_Q2W7A4 Response regulator n=4 Tax=Proteobacteria RepID=Q2W7A4_MAGSA Length = 634 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 12/170 (7%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 RL + + ++SD MTGL NR+ L ++ + + + S++ + +D+D K +NDT G Sbjct: 453 RLMETLRESSLSDPMTGLNNRRFLEEYVDTLVANVHRRKSALTVMMLDLDHFKMVNDTYG 512 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GD + L++ ++Q++R SD IR GG+EF I+LVD+ A Q+ E+I ++ + Sbjct: 513 HDAGDAVLKALSKVLRQAVRASDLVIRFGGEEFLIVLVDTPSAEADQVAEKIRALVEALV 572 Query: 455 PQK---------EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 Q IG S ++DT A K +D LY K+N +R Sbjct: 573 VQTGTVTIRKTISIGLSD---FPTDSDTFWQAVKFADVALYQAKENGRNR 619 >UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6W8_ALHEH Length = 382 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 95/170 (55%), Gaps = 10/170 (5%) Query: 332 MHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIND 391 M RLY+ +R D +TGL+NR+ LT ++E+ + +++G + + D+D+ K+IND Sbjct: 207 MLLRLYRQATR----DPLTGLFNRRALTEQIERERARFLRTGRPLTVLLFDLDRFKRIND 262 Query: 392 TLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ 451 GH GD + + A ++Q++R +D+ R GG+EF L ++T + A + ER+ + + Sbjct: 263 HHGHLVGDRVLQVFANVVQQNLRTTDHFGRWGGEEFLAALPETTSEQARVVAERVRQACE 322 Query: 452 H----IAPQKEIGFSS--GIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + +A +GF++ G+ + ++TL + DE LY K +R Sbjct: 323 NERLTLAEGPSLGFTTSIGVATLHRDETLDSLFNRVDEALYNAKAYGRNR 372 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 7/164 (4%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 Q + N DA+TG+YNR+ L L++ + + + ID+D K++NDT GHQ Sbjct: 135 QKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPFSLMMIDIDFFKKVNDTHGHQG 194 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL----VDSTPQIAAQLPERIEKRLQHI 453 GDL + +A IRKSD+ R GG+EFC +L D+ +A L IE ++H+ Sbjct: 195 GDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDCDAAETVAEHLRAHIEN-MEHL 253 Query: 454 APQK--EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +K + S GI +D+ K +DE LY K++ +R Sbjct: 254 FQKKVIRVTISLGIACFAPDDSPETLVKRADEALYQAKRSGRNR 297 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 16/204 (7%) Query: 296 GIRVSLSID--ILYFITSSWKSVLF------WILTALILLNMVRMHFRLYQNVSRENISD 347 G VS+ D I F T W+++L ++ T L + R+ F V D Sbjct: 278 GYIVSIKRDNNIKMFDTIFWQNILLGSILILFLFTILFYFAISRIKFEEMATV------D 331 Query: 348 AMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQ 407 +TGL+NR E +++ + + I D+D K+INDT GH GD+ + LA+ Sbjct: 332 KLTGLFNRHKFQEIAEIEIKRSHRHKRPLSVILFDIDHFKKINDTYGHDIGDVVLRELAK 391 Query: 408 AIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ-HIAPQ-KEIGFSSGI 465 IKQ+IRK DYAIR GG+EF I+ ++ + A + E++ K ++ H P+ ++ S G+ Sbjct: 392 IIKQNIRKYDYAIRWGGEEFLILTPETDEKQAFAMAEKLRKAVESHTFPEVGKVTISLGV 451 Query: 466 YAMKENDTLHDAYKASDERLYVNK 489 ++ N+++ A K +D LY +K Sbjct: 452 ASVDPNESIDQAIKKADNALYGSK 475 >UniRef50_B1I2H9 Diguanylate cyclase n=3 Tax=Clostridia RepID=B1I2H9_DESAP Length = 471 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 89/161 (55%), Gaps = 2/161 (1%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 +L + RE +D +TG +N++ L L L++ + G+ + I +D+D K NDT G Sbjct: 304 KLIHRLEREAETDFLTGFFNKRALRNLLIVELERTTRYGTPLSVIFLDIDDFKTYNDTFG 363 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GD+ + A+ I+ SIR D A R GG+EF IIL + + A + ERI+K ++ Sbjct: 364 HVAGDVVLQKTAEIIRNSIRLVDIAGRYGGEEFVIILPGTKEEGAVAVAERIQKSIEAFP 423 Query: 455 -PQKEIGFSSGIYAMKENDTLHDAYKASDERLY-VNKQNKN 493 P++++ S GI K ND++ + +D+ Y +Q KN Sbjct: 424 FPRRQVTTSLGIALAKNNDSVDSLLERADQACYQAKRQGKN 464 >UniRef50_B5EUG0 Ggdef domain protein n=3 Tax=Aliivibrio RepID=B5EUG0_VIBFM Length = 477 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 91/301 (30%), Positives = 149/301 (49%), Gaps = 52/301 (17%) Query: 206 LSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTL 265 L+ Y + T +N+ S+ P+Y L ++++DI + L H+R + Sbjct: 213 LTEKYIEDGTGENIRSIYYPIYNKRHLDALLVVDIKASLL------HER----------I 256 Query: 266 TDTDSGRDIIIN-QSEDNLFQYVSYVHDLPGGI--RVSLSIDILYFITSSWKSVLFWILT 322 + +++++N Q+++NL+Q +Y LP +L I+++ I K ++F L Sbjct: 257 EHYNKIKNMVVNSQNKNNLYQKSAY---LPCSELDPFTLGINLVDLI----KKIIFPSLF 309 Query: 323 ALILLNMVRMHFRLYQNVSRENI---SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 + L F + NV R D MTG Y R E+RL+K+ + + Sbjct: 310 ITLAL------FAIGYNVKRSKFLLQYDTMTGFYRRDFY----EKRLKKM----KAFSLL 355 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS-DYAIRLGGDEFCIIL----VDS 434 ID+D KQINDT GH++GD I +AQ I S+R + DY IR GG+EF I+L V + Sbjct: 356 IIDIDNFKQINDTYGHKKGDEVIQQIAQRILASVRSNQDYCIRWGGEEFIILLDSVSVTN 415 Query: 435 TPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 + + A ++ IEK L IA + G+ + ++ T DAYK +D LY +K N + Sbjct: 416 SEEKAERIRSEIEKEL--IADLQVTVSIGGV--VDDDTTFSDAYKRADAALYQSKNNGRN 471 Query: 495 R 495 R Sbjct: 472 R 472 >UniRef50_B1HWA5 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Bacillaceae RepID=B1HWA5_LYSSC Length = 325 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 3/148 (2%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +TGL NR+ +LEQ+L +S +D+D K++NDT GHQ GD + L Sbjct: 167 TDKLTGLKNRRFFQEKLEQQLNSYYESAKPFSLCILDIDHFKKVNDTFGHQVGDDVLAQL 226 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR--LQHIAPQKEIGFSS 463 AQ + Q RK D +R GG+EF +IL ++ A ++ E+I K L H P ++ S Sbjct: 227 AQLLTQRARKEDTVVRYGGEEFVMILPETEIAAAKEIGEQIRKTVALDH-WPVGQVTISI 285 Query: 464 GIYAMKENDTLHDAYKASDERLYVNKQN 491 G+ + DT K +D+ LY +K+N Sbjct: 286 GLATVTSKDTGTTLLKNADDALYASKKN 313 >UniRef50_B5YCT8 Diguanylate cyclase (Ggdef) domain protein n=2 Tax=Dictyoglomus RepID=B5YCT8_DICT6 Length = 1052 Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 2/149 (1%) Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITL 404 I D +TGL+NR LE+ V+ I ID+D K+INDTLGH GD + Sbjct: 895 IFDPLTGLFNRSYGERRLEEAFLDFVRENEDFSIIFIDIDGFKKINDTLGHSYGDYVLKE 954 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSG 464 +A AI+ SIR+SD A+R GGDEF I+L + A ++ RI+ R++ ++ + EI S G Sbjct: 955 IATAIRNSIRQSDSAVRWGGDEFLILLRRADYNEAMKVVNRIKDRIESVS-KGEIRISYG 1013 Query: 465 IYAM-KENDTLHDAYKASDERLYVNKQNK 492 I KE + + +D ++Y +K K Sbjct: 1014 IETTSKETSSYRELIDRADVKMYAHKFRK 1042 >UniRef50_A4BNX7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNX7_9GAMM Length = 474 Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 87/152 (57%), Gaps = 6/152 (3%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 SD +TGLYN + +L L++ + G + + +D+DK K IND+LGH EGD + L+ Sbjct: 297 SDNLTGLYNSRKCRADLNYELERHRRYGHPLSIVVLDVDKFKHINDSLGHAEGDRVLQLI 356 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIG----- 460 +++S RK+D A R+GG+EF ++L D+ P+ A + RI RL+ A + G Sbjct: 357 GNVLQESRRKADSAYRIGGEEFLMLLPDTEPKDAWIVATRIRDRLRQKAFETLDGTRLLI 416 Query: 461 -FSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 S GI + ++T + + +D+ +Y K++ Sbjct: 417 TLSGGIAGYRGDETEREFFTRADQAMYEAKRS 448 >UniRef50_A7HLY2 Diguanylate cyclase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HLY2_FERNB Length = 490 Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 97/179 (54%), Gaps = 16/179 (8%) Query: 326 LLNMVRMHFRLYQNVSRE-----------NISDAMTGLYNRKILTPELEQRLQKLVQSGS 374 ++NM+ + F + +V RE +I D +TG Y+R+ L LE+ L K + + Sbjct: 316 VVNMITLAFS-FLDVLREVDEERRKLFELSIKDYLTGAYSRRFLEQYLEKELFKSKRMKT 374 Query: 375 SVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDS 434 + + ID++ K+IND GH GD A+ + + + ++IR D R GGDEF I+L ++ Sbjct: 375 PLSVVFIDINDFKKINDIYGHVYGDNALKMFVKIVNETIRSMDLIARYGGDEFVIVLPET 434 Query: 435 TPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKN 493 + A ++ ERI RL+ ++ I S GI E ++ D YK DE++Y K+ KN Sbjct: 435 VLENAQKVIERIIDRLK----EENITISYGIIDASEYGSIDDIYKTVDEKMYEMKKRKN 489 >UniRef50_O66743 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O66743_AQUAE Length = 246 Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 10/165 (6%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 +L +N+ + D++TG+YNRK L + +K I ID+D K++ND G Sbjct: 80 KLLRNLEKRTYIDSLTGVYNRKFLEEIFKLEKEKYRTFRKEFCIIFIDLDNFKEVNDRYG 139 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQ-----IAAQLPERIEKR 449 H EGD + +A+ IK+S+RK DY IR GGDEF II P+ I ++L + I+ + Sbjct: 140 HMEGDKVLKRVAELIKKSVRKEDYVIRYGGDEFVII--TEAPRGDVLSIMSRLQDVIKIK 197 Query: 450 LQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 + + IG S + + L + K +DER+Y K+ KN Sbjct: 198 YKEVEVTASIG--SACFP-NDGKELEELIKKADERMYRIKKMKNE 239 >UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGM9_9PROT Length = 334 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 102/179 (56%), Gaps = 8/179 (4%) Query: 325 ILLNMVRMHFRLYQNVSRE------NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 I L+ +++ ++ Q +S+ I+D +TGLYNR L L+ + K+V+ + + Sbjct: 153 IKLSNIKLEEKIQQELSKNIELNALAITDKLTGLYNRVKLDKVLDLEINKMVKLQAEISI 212 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 I ID+D+ K INDT GHQ GD + +Q +K +IRK+D R GG+EF II ++ + Sbjct: 213 IFIDIDRFKPINDTYGHQIGDKVLQSFSQVLKNNIRKTDIVGRWGGEEFLIICHEANIEG 272 Query: 439 AAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + L E + K +++ + + KE+ S G+ + ++ D++ + +D+ LY K N ++ Sbjct: 273 SLHLAENLRKIIENTSFEYIKELTASFGVASFEDGDSIDSLVERADKALYKAKHNGRNK 331 >UniRef50_Q3AB06 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB06_CARHZ Length = 217 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 14/165 (8%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 L++ VS + +DA+TGL+NR +L +++ + I +D+D K IND GH Sbjct: 52 LFKEVSVQANTDALTGLFNRNYFNEKLYN-----IKTKGPISLILLDLDNFKNINDLYGH 106 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI-- 453 GD + +A+ +K RK D +R GGDEF ++L ++T Q A + +RI+ ++++ Sbjct: 107 LAGDTVLQKVAEILKNVTRKVDIIVRWGGDEFAVVLWETTEQEALNIAQRIKTQIENYDF 166 Query: 454 ---APQKEIGFSSGIYAMKENDTLHDA---YKASDERLYVNKQNK 492 + I S GI +M+E+D L+D +K +DE LY+ K K Sbjct: 167 VFGQSRVRISVSIGIASMQESD-LNDKDQLFKTADEALYLAKGKK 210 >UniRef50_A4BB60 Putative sensor protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BB60_9GAMM Length = 411 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 5/163 (3%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + ++ + + D++TG+ NR+ LT L++ +Q+ + + + +D+D KQ+ND GH Sbjct: 243 EELNHQAMHDSLTGVLNRRALTTRLDEEVQRSRRHNHPLTLLFLDLDHFKQVNDHYGHAV 302 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL-----QH 452 GD + QA+ + IR+SD R GG+EF IIL D+T + +L ER+++ +H Sbjct: 303 GDQILQETCQALTECIRESDVLARYGGEEFAIILTDTTLEAGHELAERLQECFSTRFSRH 362 Query: 453 IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +K + S G+ ++ DTL + +D LY K + +R Sbjct: 363 AILEKPLTMSVGLTSLFPTDTLTQLFTRADTALYDAKNSGRNR 405 >UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Cyanothece RepID=B7JZG8_CYAP8 Length = 668 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 8/171 (4%) Query: 333 HFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGS-SVMFIAIDMDKLKQIND 391 + +L + + +++ D +TGL+NR+ L + + L ++Q S+ I +D+D KQ ND Sbjct: 489 NLKLRETLEEQSLRDPLTGLFNRRYLEISINRELNTIIQDQDYSLGLIMLDIDHFKQFND 548 Query: 392 TLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ 451 GH+ GDL + +A ++ IR+SD A R GG+EF IIL ++ + E+I + ++ Sbjct: 549 NFGHEAGDLVLQTVANCLQNHIRQSDIACRFGGEEFMIILPRASLNKTLERAEKIRESIK 608 Query: 452 HIA------PQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 + P I S G+ A +N TLH+ + +D+ LY K+ R Sbjct: 609 QLKIEYKSQPLDSITASFGVAAFPQNGTTLHELFIDADKALYQAKKQGRDR 659 >UniRef50_A5F8F8 GGDEF family protein n=28 Tax=Vibrio RepID=A5F8F8_VIBC3 Length = 443 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 6/149 (4%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D++TG+ NR+ +L L K +S + + D+DK K+INDT GH+ GDL + +A Sbjct: 273 DSLTGILNRRAFKQQLSHALIKAKRSNMKLALLFFDLDKFKEINDTKGHEVGDLVLQEIA 332 Query: 407 QAIKQSIRKSDYAIRLGGDEFCI---ILVDSTPQI--AAQLPERIEKRLQHIAPQKEIGF 461 Q +K SIR+SD+ RLGGDEF + +L D + I A Q+ E+++K LQ EIG Sbjct: 333 QRLKGSIRESDFCGRLGGDEFVVCLDLLQDHSGVINKAYQMLEKLQKPLQLNQESLEIGV 392 Query: 462 SSGIYAMKENDT-LHDAYKASDERLYVNK 489 S G+ E T + + + +DE +Y K Sbjct: 393 SIGVALYPEQATQVPELLRIADEAMYTAK 421 >UniRef50_A1T384 Diguanylate cyclase n=2 Tax=Mycobacterium RepID=A1T384_MYCVP Length = 361 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 6/178 (3%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 +L + +L ++ F L Q S+++++D +T L NR+ L + QRL + +G+ + + Sbjct: 180 LLVTVCILPALQFGFWLLQGSSKQSLTDPLTELTNRRGLAVSM-QRLNEAAPTGADLCAL 238 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP-QI 438 ID+D K++NDTLGH GD + A+ I+QS+R +R GG+EF ++VD P Q Sbjct: 239 LIDVDGFKRVNDTLGHAVGDEVLIRTARRIRQSVRGDAVVVRWGGEEF--LVVDRIPAQQ 296 Query: 439 AAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 A ++ ERI + A Q + S G+ D L D A+D +Y K R Sbjct: 297 AGKVAERIRAAVSAPA-QPPVTVSIGLATCTRPDLDLIDVITAADAAMYEAKARGGDR 353 >UniRef50_Q2BJ34 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ34_9GAMM Length = 229 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 19/199 (9%) Query: 300 SLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILT 359 ++++ + YF S WK + Y+ R +I D++T LYNR+ T Sbjct: 45 TMAVSLAYFAYSRWKEAM-----------------GFYRTAHRLSIRDSLTDLYNRRYFT 87 Query: 360 PELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYA 419 L+Q + +S I ID+D K+INDT+GH+ GD + +Q + + +RKSD A Sbjct: 88 ETLQQEISNCNRSKLPFTLILIDLDDFKRINDTMGHETGDDVLVGFSQVLSKELRKSDTA 147 Query: 420 IRLGGDEFCIILVDSTPQIAAQLPERIEKRL-QHIAPQ-KEIGFSSGIYAMKENDTLHDA 477 R GG+EF I+ ++ A + +++ L + I P+ + + GI N+T+ Sbjct: 148 ARWGGEEFIILCRNTDNPSAQMIADKLLNALRKKIYPKDTHVTATMGITTSFGNETMEII 207 Query: 478 YKASDERLYVNKQNKNSRS 496 K +D+ LY K +++ Sbjct: 208 IKKADDCLYTGKSRGKNQA 226 >UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YC42_9BURK Length = 409 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 11/167 (6%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + R D +TGL+NR L++ + GS+ + +D+D K+INDT GH Sbjct: 243 RELERLTRQDGLTGLFNRNTFVELSTNELKRAKRQGSATTILLLDLDHFKRINDTWGHPA 302 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ------ 451 GD+ + +AQ + S+R +D RLGG+EF ++L +T + + ++ E+I +RL+ Sbjct: 303 GDVVLRHVAQTMVNSVRSTDLVGRLGGEEFIVLLPHTTAEASRKIAEKIRQRLEVSDIRW 362 Query: 452 ---HIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 IA IG SG A +E+ Y +D+ LY+ KQ +R Sbjct: 363 EGKRIAVTASIGL-SGTTA-EESREFDSLYTEADKALYLAKQRGRNR 407 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 22/203 (10%) Query: 299 VSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKIL 358 + L + I YF+T W+ VL L+M + H + R +D +TGL NR+ + Sbjct: 232 IGLLLGITYFLT--WRLVLN--------LDMAQKHLK------RLASTDELTGLKNRRQI 275 Query: 359 TPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDY 418 L++ Q+ ++ G + I +D+D K+INDT GH GDL + +A +K+++R+ D Sbjct: 276 MKRLDEEYQRAIRLGEPLCLIMLDLDHFKKINDTYGHPFGDLVLKCVAGHMKKALRRYDV 335 Query: 419 AIRLGGDEFCIILVDSTPQIAAQLPERIEK--RLQHIAPQKE---IGFSSGI-YAMKEND 472 R+GG+EF I+ +T + A L +R+ ++ IA + + I S G+ + K +D Sbjct: 336 LGRIGGEEFLIVSPGTTREEAVVLAQRLRSTVEMEKIAYEDKKVTITVSCGVAFLYKGDD 395 Query: 473 TLHDAYKASDERLYVNKQNKNSR 495 + K +D LY+ KQ +R Sbjct: 396 NVEILLKRADSALYIAKQEGRNR 418 >UniRef50_A6B1L2 Ggdef domain protein n=6 Tax=Vibrio RepID=A6B1L2_VIBPA Length = 402 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 3/160 (1%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 RL ++++ + DA+TGLYNR+ + + + + + + + + D+D K IND G Sbjct: 217 RLVKSINDLSHLDALTGLYNRRAMEVIVPNLVNQAREKNTPISIVMTDVDDFKTINDQYG 276 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA--QLPER-IEKRLQ 451 H GD + +A KQ++ +S +R GGDEF I+L+ +T A +L R IE+ Sbjct: 277 HTTGDSVMATIATIFKQTLPESACTVRFGGDEFMIVLLANTENAKAYTELVRRSIERETS 336 Query: 452 HIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 +A + ++ S GI + ND+L DA +DE LY +K Sbjct: 337 LLAFKNQVTMSFGISELMPNDSLQDALTRADEALYCSKHT 376 >UniRef50_D1B7T5 Diguanylate cyclase with GAF sensor n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7T5_THEAS Length = 642 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 14/192 (7%) Query: 302 SIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPE 361 S DI +F T +W W M +H + ++ D +TGL+NRK L Sbjct: 461 SADIWFFETLAWHVGALWE-------GMEHLHL-----LELQSFKDPLTGLWNRKYLEAR 508 Query: 362 LEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIR 421 LE+ L++ +SG +V +D+ K +NDT GH+ GD + +A+A+ S+R D +R Sbjct: 509 LEEELRRSARSGQAVCIAMVDLSNFKAVNDTYGHEVGDRVLAEVARALSASVRSCDVLVR 568 Query: 422 LGGDEFCIILVDSTPQIAAQLPERIEKRLQH--IAPQKEIGFSSGIYAMKENDTLHDAYK 479 GGDEF + + + L R+ ++ + I F G+ ++ + DA Sbjct: 569 YGGDEFVVFSPGAGERELEGLLSRVRASMEEMKLCSVGGISFDYGVTCFSPDENIMDAIA 628 Query: 480 ASDERLYVNKQN 491 +D +Y+ K+ Sbjct: 629 RADGIMYLRKRG 640 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/228 (30%), Positives = 116/228 (50%), Gaps = 26/228 (11%) Query: 288 SYVHDLPGGIRVSLSIDILYFITSSWKS-----------VLFWILTALILL--NMVRMHF 334 S V DLP + V + +D +T+ W++ + IL A + L M+R F Sbjct: 272 SRVGDLPLIVVVGVGMDA---VTAPWQAQWLAGAATSVVLCLLILGAAVALRREMLR-RF 327 Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 + Q R + +D++TGL NR+ ++ Q+ + SS+ + +D+D KQ+ND +G Sbjct: 328 EIEQEFLRLSQTDSLTGLPNRRHFDEFGQREWQRAARQRSSIAVLMVDIDHFKQVNDRIG 387 Query: 395 HQEGDLAITLLAQAIKQSI-RKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL--- 450 H GD + ++ I+ S+ R D+A R GG+EF IIL ++ AA + ERI + Sbjct: 388 HPGGDRVLREVSDIIRASLHRPGDFAGRYGGEEFAIILPETDAPAAAHVAERIRAAIEAN 447 Query: 451 --QHIAPQK-EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + +AP IG ++G+ A K TL + A+D LY K+ +R Sbjct: 448 TAEGVAPVTVSIGLAAGLAAPK--GTLAEMMIAADHALYRAKETGRNR 493 >UniRef50_A6GF95 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GF95_9DELT Length = 306 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 11/180 (6%) Query: 326 LLNMVRMHFRLYQNVSRENIS-------DAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 L M+R+ RL Q + E S D +TGL NR+ + L +SG V Sbjct: 122 LTAMLRIR-RLTQYLESERSSYERLAHVDELTGLPNRRRYDERMHSELALARRSGRPVTL 180 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 + +D+D K +ND+LGHQ GD + + + + S R+ D+ R GG+EF II ++T + Sbjct: 181 LLVDIDHFKDVNDSLGHQVGDEVLGFMGELLDASTRRGDWPFRFGGEEFAIIARNTTAKQ 240 Query: 439 AAQLPERIEKRLQHIAPQKEIGF---SSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 A+ L ERI + + + G S GI + + DT + +D RLY KQ +R Sbjct: 241 ASVLGERIRGAFEARSGETAAGLRTCSVGIASFEPADTPEALFARADARLYAAKQAGRNR 300 >UniRef50_C9PHC5 Putative two-component response regulator and GGDEF family protein YeaJ n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PHC5_VIBFU Length = 458 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 19/189 (10%) Query: 313 WKSVLFWILTALI--LLNMVRMH----FRLYQNVSRENISDAMTGLYNRKILTPELEQRL 366 W V+ W+ A + L ++M+ F + NV D +TGL NR +L +Q+ Sbjct: 269 WLFVVMWVGVAYVIYLFRTLKMNRSKLFEVESNVKL----DDLTGLLNRNVLK---DQKF 321 Query: 367 QKLVQS-GSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGD 425 + +++ G+++M AID +KLKQINDT GH GD AI +A ++Q R++DY IR GGD Sbjct: 322 SEDLKAFGAAIM--AIDGNKLKQINDTYGHHVGDDAIKQIAYGMRQVFRENDYLIRTGGD 379 Query: 426 EFCIILVDSTPQIAAQLPERIEKRLQHI---APQKEIGFSSGIYAMKENDTLHDAYKASD 482 EF +L A L ER+++ + + + + S GI + ++T +A K +D Sbjct: 380 EFVAVLPGCNLDNAIILAERLKEAVMGTTFSSYKLNVSISVGITLLMNSETFEEALKRAD 439 Query: 483 ERLYVNKQN 491 LY KQ+ Sbjct: 440 SNLYSEKQS 448 >UniRef50_Q6LT28 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LT28_PHOPR Length = 493 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 115/492 (23%), Positives = 216/492 (43%), Gaps = 30/492 (6%) Query: 15 SVIVLTSSFLIFELVASD-----RAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALA 69 S+I+L +S +I ++ + ++YL + SS L Y+N+ A ++ +LA Sbjct: 4 SLIILVNSIVILLAISINIRNEIENTTSYLESNLSIIKSSLLTLAYRNERYAKYI--SLA 61 Query: 70 AEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPA 129 + Q + N G N +K L GTL + + + P Sbjct: 62 VNNNNNQLGQSLVTVHHYPELNE-FGFNRGQYKDNLLNGTLVGIGEPSPSALTDTFIFPT 120 Query: 130 FDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSI 189 D H + + ++ ++Y+ +F P N+ F +++ + S Sbjct: 121 IDDLWAEKHHLNINYNYYYVSYLNEYFYVSSKYTSTFFKLPPNI--FETQDYN--EQRSY 176 Query: 190 GIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIF 249 K+++K F S Y D TKQ + S+ +P+Y ++ G + +D+ L +I Sbjct: 177 YKSEKELKKGF----YFSQPYIDIVTKQKIFSIKSPIYSNDKIIGDIGVDVP---LTSIT 229 Query: 250 YTHDRP-LLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYF 308 P L + + L + ++II+ + + + + + + +DI Y Sbjct: 230 SAITLPKALHSSIFIYLYAMSTQQEIILRKGLHIFWPIIDVQKTIDDFLHIHAEVDIRYV 289 Query: 309 ITSSWKSVLFWILTALIL---LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQR 365 + S+ ++ ++ ++L + V H Q +E +D +TGLYNR++L + Sbjct: 290 LRSAAPNIALVLILIILLNYLMMRVERHKIQQQTYKKEARTDLLTGLYNRRVLLSIVVNL 349 Query: 366 LQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGD 425 +++ S ++V I ID + K IND GH GD A+ ++ I R +D IRLGGD Sbjct: 350 IEQCRISYNAVSLIVIDANGFKAINDNYGHDIGDAALKHISSQIFLLSRSTDICIRLGGD 409 Query: 426 EFCIILVDSTPQIAAQLPERIEK-----RLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA 480 EFC+IL T A +L R+E R H I ++ ++ ++T+ +A Sbjct: 410 EFCLILPYVTQAQALKLASRLESSISITRFCHHDIYTSI--TTSCTQIQADETIDNALIR 467 Query: 481 SDERLYVNKQNK 492 +D++LY NK+N+ Sbjct: 468 ADKQLYKNKRNR 479 >UniRef50_UPI0001AEC1FC diguanylate cyclase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC1FC Length = 502 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 3/147 (2%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +T Y R+ L + + +SGSS+ F+ D+DK K+IND LGH +GD A+ L+ Sbjct: 349 DTLTQAYTREYLAQRSALEMAQSRESGSSLYFVMFDLDKFKRINDELGHVDGDNALRRLS 408 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSS--G 464 Q K +RK+D R GGDEF ++L + Q A L E++ + + I E+ SS G Sbjct: 409 QVTKDIVRKADVFARFGGDEFVLLLPNINEQNALNLVEKVREGINAII-ISEVSLSSSFG 467 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQN 491 + M+++DTL + +D LY +K+ Sbjct: 468 VTLMQQSDTLETLIQRADRALYASKEK 494 >UniRef50_Q21FP0 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FP0_SACD2 Length = 498 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 12/152 (7%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +T YNR+ + L+ K SG ++ I +D+D K++NDT GH GD+ I ++A Sbjct: 333 DPLTDCYNRRAMRERLDDEFAKAQNSGKDLVCIMLDIDHFKRVNDTYGHGVGDVVIKMVA 392 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL--QHIAPQKEIGFSSG 464 Q +K+++R SD R GG+EFC++L ++T + + +R + Q+ K + S G Sbjct: 393 QVVKEAVRDSDIVARFGGEEFCVVLPNATVEQVKIIAKRCRMTIETQNCGGVK-VTSSFG 451 Query: 465 IYAM-----KENDTLHDAYKASDERLYVNKQN 491 I A+ ND +H A DE LY +KQN Sbjct: 452 IAALSLGAKSPNDLIHQA----DEALYNSKQN 479 >UniRef50_C1A9Y8 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Y8_GEMAT Length = 426 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 6/167 (3%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 R + +E+ +D +TGL NRK+ + +Q V+ + +D+DKLK +ND G Sbjct: 248 RQLEEARKESTTDPLTGLGNRKLFDMMAPRAVQMFSLGRQPVVLLMVDLDKLKLVNDMYG 307 Query: 395 HQEGDLAITLLAQAIKQS-IRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL--- 450 HQ GD AI LA A+ + +R+SD R GGDEF IL ++ ++A L R++++L Sbjct: 308 HQAGDQAIQALANALGRVFLRQSDVLCRFGGDEFTAILHNTDWKMAQTLARRLQEQLAGM 367 Query: 451 --QHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 H A + IG S G+ ++ ++ + + +D+ LY KQN R Sbjct: 368 PAPHPAMEFSIGASVGVAQLEMHEDVGEWLARADKALYKAKQNGRDR 414 >UniRef50_A0YKK9 GGDEF domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YKK9_9CYAN Length = 514 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 26/208 (12%) Query: 307 YFITSSWKS----VLFWILTALILLNMVRMHFRLYQN--VSRENI--------------S 346 Y+I+ S+ VLFW + A+ ++V + Y+N +SR N + Sbjct: 301 YWISVSYDKGFDYVLFWEIMAV---SLVILSLLFYRNLIISRYNKKLIEANKKLDCLYKT 357 Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL+NR I+ E E+ + + + + +D+D KQINDT GH GD + +A Sbjct: 358 DKLTGLFNRHIIDEETEKEVLRANRYNLGFSVVLLDVDHFKQINDTYGHHVGDSVLVEIA 417 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL---QHIAPQKEIGFSS 463 +K ++RK+D R GG+EF +I ++ AA L E++ ++ Q +K I S Sbjct: 418 FILKNNLRKTDVVGRWGGEEFIVICPETQLTNAAHLAEKLRSQIECHQFSGVEKTITASF 477 Query: 464 GIYAMKENDTLHDAYKASDERLYVNKQN 491 G+ A + +DT+ K D LY +K+N Sbjct: 478 GVSAYRVDDTVESLIKRVDSTLYFSKRN 505 >UniRef50_Q7MSX2 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MSX2_WOLSU Length = 609 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 7/167 (4%) Query: 332 MHFRLYQNVSREN-ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIN 390 +H R+ + +E+ + D +TGLYNRK L +E + ++S ++ + ID+D K +N Sbjct: 424 LHTRMLMEMLKESSLRDPLTGLYNRKFLEEYIESATHQALRSKTTYAILMIDVDFFKMVN 483 Query: 391 DTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 DT GH GD I+ L+ I+ +IR++D A+R GG+EF ++L +S P+ A ++ ++I R Sbjct: 484 DTYGHDVGDQVISGLSNIIQNTIREADLAVRFGGEEFIVLLYNSAPEGAERVAQKIRTRF 543 Query: 451 QHIA-----PQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQN 491 + + S GI E+ T+ A K +D LY K++ Sbjct: 544 SEMVFEVNHERFSKTLSVGISMFPEDGPTVWRAIKFADIALYKAKES 590 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 5/155 (3%) Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITL 404 I D +TG+YNR LEQ +++ + S +D+D K INDT GH GD + Sbjct: 458 IHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFSMAFMDIDHFKMINDTYGHDVGDAVLVS 517 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA----PQKEIG 460 LA+ I +R +D R+GG+EF I++ +++ + A + ERI ++ I+ P+K I Sbjct: 518 LAKNISSLLRSTDVFCRVGGEEFVIMMPETSLENALIISERIRSTVEGISSKDVPEK-IT 576 Query: 461 FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S G+ + D + YK +DE LY K+N +R Sbjct: 577 ISMGLVELNSWDNVQSFYKRADEALYKAKENGRNR 611 >UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter sp. M18 RepID=C6MUF5_9DELT Length = 739 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 8/160 (5%) Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 +++DA+TGLYNR+ L LE+ L + ++ G ++ I ID+D K ND GH GD A+ Sbjct: 542 SVTDALTGLYNRRFLKSRLEEELNRSIRQGLNLTVIFIDLDFFKNFNDLCGHLAGDEALK 601 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-------PQ 456 + A IK S+R+ D R GG+EFC +L ++ A + ERI ++ PQ Sbjct: 602 ITADIIKASLREMDIVARYGGEEFCAVLPGTSKAEAMIVAERIRSEIEKEKFPGEKDIPQ 661 Query: 457 KEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + S GI + E+ T +SD LY K + +R Sbjct: 662 MRLTASLGIASFPEDGRTFTTLVHSSDVALYEAKASGRNR 701 >UniRef50_Q1NSC4 GGDEF:GAF n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NSC4_9DELT Length = 376 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 8/173 (4%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 LL M + R Y+ S E D +TGL NR+ L ELE+ + SS+ I +D+D Sbjct: 204 LLGMAITNARRYEEKSAEAGQDVLTGLANRRQLNTELERDWATAQREKSSLAVIMLDLDH 263 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQ NDT GH GD + + Q ++ +R D +R GG+EF ++L + A + ER Sbjct: 264 FKQYNDTHGHLAGDRLLREMGQIMRDCVRCEDLPVRYGGEEFLVLLRRAGDARAEAVAER 323 Query: 446 IEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA---SDERLYVNKQNKNSR 495 + + +A + E+ S G+ +ND HD ++ +DE LY KQ +R Sbjct: 324 LR---EAVAARTEVTVSLGVAGSNQND--HDPWQMVQRADEALYQAKQQGRNR 371 >UniRef50_B4SNB1 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SNB1_STRM5 Length = 350 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 96/203 (47%), Gaps = 14/203 (6%) Query: 299 VSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKIL 358 + LS+ L F+ S+L W L V+ R Q +SR D + L NR L Sbjct: 154 IVLSVPFL-FVYGIGLSILSWQLA-----RRVKSQNRQLQRLSR---MDPLVELANRGFL 204 Query: 359 TPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDY 418 +Q L K G + +D+D K+IND+ GH+ GD + +A +++ R D Sbjct: 205 ILRAQQVLDKAQGQGGFACLLMLDVDDFKRINDSHGHRAGDEVLRQIAATLREFARPGDI 264 Query: 419 AIRLGGDEFCIILVDSTPQIAAQLPERIEKRL----QHIAPQKEIGFSSGIYAMKENDTL 474 RLGGDEF ++L D T + A + ERI L + +AP E S GI A T+ Sbjct: 265 PARLGGDEFVVLLRDCTTRDAMHVAERIRLHLLEAARQVAPGVEFSVSIGIAATPGQGTV 324 Query: 475 HDAYKASDERLY-VNKQNKNSRS 496 D +D+ LY +Q KN+ S Sbjct: 325 EDWLATADKALYHAKRQGKNTAS 347 >UniRef50_Q15WE3 Diguanylate cyclase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WE3_PSEA6 Length = 287 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 2/156 (1%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 Y+ + D +T L NR + + + + + ID+DK KQ+ND GH Sbjct: 132 YERIKLVATRDNLTALGNRSNFDDTMHRLFSQAKRQPCQFALLVIDLDKFKQVNDQFGHT 191 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--IA 454 +GD + AQ I +R++D+A R GGDEFC +L D+ Q+ +RI+ + + Sbjct: 192 QGDKILITCAQTISACLRETDFAFRFGGDEFCCLLTDTCIDSCQQITQRIQLAFKEDSLL 251 Query: 455 PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQ 490 Q I S G +++DT H + +D +Y NK+ Sbjct: 252 AQHYISCSIGSAIYQDDDTQHSLFMRADAAMYRNKK 287 >UniRef50_Q5LU85 Diguanylate cyclase, putative n=4 Tax=Rhodobacteraceae RepID=Q5LU85_SILPO Length = 598 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 93/170 (54%), Gaps = 7/170 (4%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 ++M + R+ + +++ D +TGL+NR+ LT L ++L G + IA+D+D Sbjct: 388 ISMAIANVRMRDQLHDQSVRDPLTGLFNRRHLTETLRKQLLHCQTRGGRLSLIAVDVDHF 447 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K+ NDT GH GD+ + + A++Q+ + + A R+GG+EF ++L+D P+ A E + Sbjct: 448 KKFNDTHGHDAGDMVLRAVGAALEQACDRDEVACRIGGEEFMLVLLDCAPEDALTRAELL 507 Query: 447 EKRLQHIAPQ------KEIGFSSGIYAMKENDTL-HDAYKASDERLYVNK 489 + ++ ++ + + S+G+ + T+ D +A+D+ LY K Sbjct: 508 RQSVEEVSVRYGEKTLPRVTISAGVAHYPRHGTMPQDLMRAADDALYEAK 557 >UniRef50_D2L091 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L091_9DELT Length = 415 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 90/169 (53%), Gaps = 6/169 (3%) Query: 332 MHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIND 391 +H ++++ +SR+ SD +TG+ NR L L + GS + D+D+ K +ND Sbjct: 246 LHVKIHEELSRQRDSDELTGIPNRASLRRNAPSLLSLAERRGSPAALLFCDLDRFKAVND 305 Query: 392 TLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ 451 GH++GD + +A+A+ IR D RLGGDEF +++ D+ AA + +R+ + Sbjct: 306 LFGHEKGDAVLCDVARAMAGRIRAYDMLARLGGDEFVVLMPDAGNHEAAVMAKRLRACVA 365 Query: 452 HIAPQKEIGFSSGI-----YAMK-ENDTLHDAYKASDERLYVNKQNKNS 494 +A +E+ + G+ AM ++ D + +DE +Y +K+ +N Sbjct: 366 QVARDRELSGAPGLSVSIGVAMHVPGQSIDDLIRRADEAMYADKRAENG 414 >UniRef50_B4U722 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U722_HYDS0 Length = 640 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 70/117 (59%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 L + + ++I D +TG YNR+ + ++ L + G + + ID+D K+IND GH Sbjct: 460 LMEKLKEQSIKDQLTGFYNRRYIEEAIDPILNNAKRKGETTGVLMIDVDHFKEINDKYGH 519 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH 452 GD+ + +AQ IK+SIR+SD IR GG+EF ++L + P + + E+I K +++ Sbjct: 520 DVGDMVLKTVAQTIKESIRESDIPIRFGGEEFMVLLTNVKPGDSESVAEKIRKNMEN 576 >UniRef50_A8RJQ6 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJQ6_9CLOT Length = 312 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 96/174 (55%), Gaps = 14/174 (8%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 NM ++++ Y+ D +TGLYNR+ + +L + ++ Q +FI D+D K Sbjct: 142 NMEKLNYMAYR--------DGLTGLYNRRYVVGDLMEDMRSCGQDEVKTVFIMADIDDFK 193 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 Q+NDT GH GD+A+ +A ++ + R+ +R GG+EF +IL + T A +L E++ Sbjct: 194 QVNDTYGHDAGDMALVCIANILESNCRRH-RVVRWGGEEFLLILFNVTKDEAYELSEKVR 252 Query: 448 KRL-QHIAPQKEIGF----SSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 +++ Q + P + GF + G++ E + L + +D+ LY K++ ++S Sbjct: 253 RQVEQFVIPYGDKGFFCTMTLGLHIFHEQEGLEEGIGCADKALYYGKRHGKNQS 306 >UniRef50_Q21LR8 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21LR8_SACD2 Length = 390 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 71/110 (64%), Gaps = 1/110 (0%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +DA+TGLYNR+ ++E+ + +++G + I +D+D K ND+LGH EGD I + Sbjct: 226 TDALTGLYNRRFFNAQIEKEWLRALRTGECLSVIIVDIDNFKGFNDSLGHLEGDRCIARV 285 Query: 406 AQAIKQSIRK-SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 A +K ++R+ +D+A+R GG+EF +IL +++ A L ER+ ++ +A Sbjct: 286 AGVLKGAVREGTDFAVRYGGEEFALILANTSLGAALGLAERLRSGVEGLA 335 >UniRef50_C1A7I4 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7I4_GEMAT Length = 446 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 6/170 (3%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 + MH R + + R +++D +TGLYNR+ EQ+L+ + G + + DMD KQI Sbjct: 193 ISMHKREERRLRRASLTDDLTGLYNRRGFLALAEQQLRVARRHGKDAVVMYADMDDFKQI 252 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 NDT GH GD A+ + + + ++R D RLGGDEF ++ +D+ A + R+++R Sbjct: 253 NDTYGHAVGDRALVAVGRLLADTVRDCDVVARLGGDEFTVLALDADGAGARAIQRRVDER 312 Query: 450 LQHI----APQKEIGFSSGIYAMKENDT--LHDAYKASDERLYVNKQNKN 493 L + A I + G ++ DT + + +D+ LY K+ + Sbjct: 313 LAVLNASEAFPTTISLTVGFTRVRPTDTAGISELLARADQLLYQRKRRRR 362 >UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8QGL2_9ENTR Length = 550 Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 14/225 (6%) Query: 282 NLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTAL---ILLNMVRMHFRLYQ 338 N+ Y+ V L G++ L + F+ S W +LF ++ A+ ++ +VR L + Sbjct: 324 NVDGYIINVQTLKQGMKQELG-RVTLFLLSMW--LLFILMLAVAHQVIFRLVRRQDELSE 380 Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 ++ D +T L NR + + Q + I +D+D K++NDT GH G Sbjct: 381 RLTWRANYDGLTRLLNRSAFFEQFVAQAAHCQQLQRPLSVIQLDVDHFKKVNDTWGHHAG 440 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ------H 452 D A+ +A I ++RK D A R+GG+EFCI+L ++T A+ + ERI RL + Sbjct: 441 DQALIRVASVISHTLRKYDVAGRIGGEEFCIVLPETTLAEASAVAERIRARLAAKTILVN 500 Query: 453 IAPQKEIGFSSGIYAMKE-NDTLHDAYKA-SDERLYVNKQNKNSR 495 + I S+G+ + +E D ++ +A +D RLY+ K N +R Sbjct: 501 ASTTFNITLSAGVTSSEEQGDYDAESLQAKADSRLYLAKTNGRNR 545 >UniRef50_Q31JI7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JI7_THICR Length = 420 Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 94/168 (55%), Gaps = 2/168 (1%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 V ++ Q ++ + DA+TG++NR+ LT + ++++ + G I D+D KQI Sbjct: 249 VSEQVKMQQELNDLAMKDALTGIWNRRHLTDVVNTEMKRVNRYGGRFGMIMFDVDYFKQI 308 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 ND GH GD + +A+ +++ +R++DY R GG+EF +I ++ + A+L E+I + Sbjct: 309 NDDFGHDIGDETLVQIAKIVQKIVRETDYIGRWGGEEFLLIALELDASLTAKLAEKIREA 368 Query: 450 LQHIAPQK--EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ++ K ++ S G +N+T +K +DE LY+ K++ +R Sbjct: 369 IEEFVFPKVGQVTVSLGATVYHKNETEAQLFKRADEALYLAKRHGRNR 416 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 90/159 (56%), Gaps = 7/159 (4%) Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 +I+D +T L+NR+ L +++ Q+ + G+ + + +D+D K+INDT GHQEGD +T Sbjct: 142 SITDPLTHLHNRRHLMEMVDKEFQRSSRKGAPLSLVILDIDYFKKINDTYGHQEGDRVLT 201 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIG--- 460 +LA +++ +R D A R GG+EF ++L ++ Q A + ER+ +Q + +G Sbjct: 202 ILADIVRRRLRSYDLAARYGGEEFVLLLPETPVQEALSIAERLRLEVQEHVFEGSLGGLV 261 Query: 461 --FSSGI--YAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S G+ Y +++ ++ +DE LY KQ +R Sbjct: 262 ITISLGVATYPSSRVESIDSLFRQADEALYRAKQGGRNR 300 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 28/230 (12%) Query: 292 DLPGGIRVSLSIDILY-------FITSSWKSVLFWILTALILLNMVRMHFRL---YQNVS 341 ++ GGI V L + +Y I S + + L ++I + + R+ RL Y+ + Sbjct: 185 EVRGGISVELDVTDIYSQIRANTLIASGLTAAISLSLLSMIWILVSRLARRLTKAYETIE 244 Query: 342 RENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLA 401 +I+D +T L+NR+ L + + + ++ GS + + +D+D K++ND GHQ GD Sbjct: 245 VMSITDELTRLHNRRHFETRLAEEISRSLRYGSPMSLMILDIDHFKRVNDNYGHQAGDWV 304 Query: 402 ITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ---------- 451 +T A +K ++RK+D R GG+EF +IL +ST A E++ + ++ Sbjct: 305 LTQFATLLKDNVRKADVPARWGGEEFVVILTESTISQARMAAEKVRRNVESAEFNIPDGR 364 Query: 452 HIAPQKEIGFS-----SGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 I +G + SG E D L K +D+ LY KQ +R+ Sbjct: 365 SIPVTVSVGVASLDMISGDEMGSEADVL---VKTADDALYRAKQEGRNRT 411 >UniRef50_Q07ZF0 Diguanylate cyclase n=21 Tax=Shewanella RepID=Q07ZF0_SHEFN Length = 530 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 7/158 (4%) Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 N+ D +T L NR L +EQ + V+ + + D+D K IND GH GD + Sbjct: 369 NLLDPLTQLANRTALEDRMEQEYRNHVRFKTPLWIAITDIDHFKNINDNFGHSTGDKTLQ 428 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK------ 457 ++A A+K S+R S++ R GG+EF ++L D T + +QL R+ +++++I P K Sbjct: 429 VIAMALKNSLRDSEFVARYGGEEFVLLLPDVTDEHISQLLNRVREKIKNI-PFKFKNQRI 487 Query: 458 EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S G + EN+TL +A++ +D LY K N R Sbjct: 488 TVTLSIGAAQVMENETLEEAFERADAALYQAKNNGRDR 525 >UniRef50_A0Q1G3 Diguanylate cyclase/phosphodiesterase domain 2 n=1 Tax=Clostridium novyi NT RepID=A0Q1G3_CLONN Length = 192 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 15/158 (9%) Query: 346 SDAMTGLYNR----KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLA 401 +D MTG+ NR K+L E + L K+ S +++ D+DKLK INDT GH+EGD Sbjct: 38 TDVMTGVLNRRAGLKLLNKEFD--LSKI--SNENIVICFADVDKLKMINDTFGHKEGDKV 93 Query: 402 ITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK---E 458 + +A+ ++ SIRK D+ IR+GGDEF I+ ++ + ++ RI++ L+ I Sbjct: 94 LKFVAKTLRDSIRKDDFIIRMGGDEFLIVFPRTSIKDVGKICNRIDEILEEINKNSCDYN 153 Query: 459 IGFSSGIY----AMKENDTLHDAYKASDERLYVNKQNK 492 + S G Y + TL D K++D +Y K+ K Sbjct: 154 LNLSYGFYEYNSKVDNKMTLSDLIKSADMEMYKKKREK 191 >UniRef50_Q3A9C3 GGDEF domain protein n=2 Tax=cellular organisms RepID=Q3A9C3_CARHZ Length = 606 Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 9/163 (5%) Query: 340 VSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGD 399 + R + D++TGL+NR+ EL + + G + +DM+ LK+IND LGHQ GD Sbjct: 437 MERLSYEDSLTGLHNRRYFFEELNKTKYDADRYGEPFTVVFLDMNGLKEINDNLGHQAGD 496 Query: 400 LAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL----VDSTPQIAAQLPERIEKRLQHIAP 455 LA+ L+ Q I+++IR+SD RLGGDEF II ++ + A+L + L+ Sbjct: 497 LALKLIGQKIRENIRQSDVGARLGGDEFGIIYRKMGLEEGKKKIAELKKNFSA-LKIKKY 555 Query: 456 QKEIGFSSG--IYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 Q+E + G Y + E +L K +D+R+Y +K KN RS Sbjct: 556 QREFSLAVGGATYPV-EAGSLEILLKLADDRMYEDK-GKNRRS 596 >UniRef50_B8CQ67 GGDEF domain protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CQ67_SHEPW Length = 296 Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 3/155 (1%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 +Q +S++ + DA+T L NR ++++ + + +S S+ + +D+D KQ+ND GHQ Sbjct: 128 FQEISKQAMFDALTQLGNRHYYLEQVKKEVARAQRSHSTFSLVTLDLDNFKQLNDRYGHQ 187 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 GD A+ A+ + + IR +D A R+GGDEF ILV + AA L +R+ L+ + Sbjct: 188 LGDAALVSFAKLLNRVIRDTDQAFRIGGDEF-TILVQGDAKAAAILCQRVLVALEELTTI 246 Query: 457 K--EIGFSSGIYAMKENDTLHDAYKASDERLYVNK 489 + +I S GI ND+ H Y+ SD LY K Sbjct: 247 ENYQIRTSLGIAQWDNNDSEHSLYQKSDSALYQAK 281 >UniRef50_D1UBY9 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UBY9_9DELT Length = 478 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 7/206 (3%) Query: 284 FQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRE 343 FQ+ V G + +++ ++ + + L I ++ +N HF+ + R Sbjct: 266 FQWHLIVEQNEGEALATARHNLIRTLSVGFGASLLIIFLCVLTVN----HFQ--ARLERM 319 Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 +D +TG NR+ L K ++ + + ID+D K INDTLGH EGD I Sbjct: 320 AKTDPLTGAANRRALEERFHLAAYKARRNATPCSAVIIDLDDFKAINDTLGHMEGDAVIK 379 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSS 463 +A I +++R +D R GGDEF +IL++ST Q A+ + ERI + + I FS Sbjct: 380 TVADTITRTLRPTDLLARWGGDEF-VILMESTAQDASIVTERIRAHMPPGPLGRTISFSC 438 Query: 464 GIYAMKENDTLHDAYKASDERLYVNK 489 GI +D L +D+ +Y K Sbjct: 439 GIAQFTADDDLKSLTHRADQAMYAAK 464 >UniRef50_Q320T0 Diguanylate cyclase yddV n=41 Tax=Enterobacteriaceae RepID=YDDV_SHIBS Length = 460 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 11/169 (6%) Query: 336 LYQNVSRENIS-DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 L++ VSR + D +T L NR+ L ++ + ++G+ + + ID+DK K+INDT G Sbjct: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWG 345 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDS----TPQIAAQLPERIEKRL 450 H GD + ++QA ++R SDY R GGDEF I+L ++ T + A ++ R+EK Sbjct: 346 HNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTK 405 Query: 451 QHIAPQKEIGFSSGIYAMKENDTLHDAY----KASDERLYVNKQNKNSR 495 A ++I S I A N H Y + +DE LY+ K+ +R Sbjct: 406 LKAANGEDIALSLSIGAAMFNG--HPDYERLIQIADEALYIAKRRGRNR 452 >UniRef50_C6WY37 Diguanylate cyclase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WY37_METML Length = 395 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 12/206 (5%) Query: 296 GIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNR 355 G+ V+ SI+ L F+ +S F + L+L+ R+ +YQ SR DA+TG NR Sbjct: 183 GLHVNTSINTLPFVVASLLE--FSVAFGLLLMLNHRLIADVYQMASR----DALTGAMNR 236 Query: 356 KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK 415 + + E + + +++G + + ID+D K IND GH GD + +A ++SIR Sbjct: 237 RRIEEEAVRLRARCIRTGEPLAIMMIDIDFFKSINDRYGHPAGDKVLRAIADIAQKSIRA 296 Query: 416 SDYAIRLGGDEFCIILVDSTPQIAAQLPERI-----EKRLQHIAPQKEIGFSSGIY-AMK 469 DY R GG+EFC++L +T A L ER+ E L Q I S G+ + Sbjct: 297 EDYFARYGGEEFCMLLTSTTESEALDLAERLRLAFAEFTLTLGKEQLNITVSIGVADSSM 356 Query: 470 ENDTLHDAYKASDERLYVNKQNKNSR 495 D A+D+ LY K+N +R Sbjct: 357 VGLEFADMVTAADKALYCAKENGRNR 382 >UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7I354_THIIN Length = 752 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 10/160 (6%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +TG+ NR+ L++ + GS + +A+D+D+ KQIND GHQ GD I Sbjct: 581 TDTLTGIPNRRYFLARAALELRRAQREGSPFVVLALDIDRFKQINDRFGHQVGDAVIRCF 640 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI------APQK-E 458 AQ Q +R D RLGGDEF I+L +T Q+A + +R+ +Q AP Sbjct: 641 AQTCMQQLRGPDLCGRLGGDEFAILLPQTTRQVAFDVAQRLRLSIQEASCLPSSAPDGLT 700 Query: 459 IGFSSGIYAMKENDTLHDA---YKASDERLYVNKQNKNSR 495 + S GI TL DA +D+ LY KQ +R Sbjct: 701 LTTSIGIAEFLPTSTLMDADELLDRADQALYRAKQAGRNR 740 >UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium RepID=B2V5Y5_SULSY Length = 411 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 104/195 (53%), Gaps = 13/195 (6%) Query: 306 LYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQR 365 LYF+ + ++++ WI + LN + + E D +TG +NR+ +++ Sbjct: 222 LYFMILNIQNIMIWIGNEFLYLNT--------KFIKLEMSIDPLTGAFNRRGFEIIIQKL 273 Query: 366 LQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGD 425 L+ + + + D+D K+INDT GH GD A+ IK+++RKSDY R+GG+ Sbjct: 274 LEISQITDAPITLAMADLDYFKKINDTFGHLAGDEALKHFVNIIKRNLRKSDYVFRIGGE 333 Query: 426 EFCIILVDSTPQIAAQLPERIEKRLQ-----HIAPQKEIGFSSGIYAMKENDTLHDAYKA 480 EF I+L ++ + A ++ ERI K L+ + + +I S G+ + + +++ K Sbjct: 334 EFLILLPNTELKDAVEIVERIRKDLEENSLHYDGKEIKITASFGLAEVDKEKYINEIIKK 393 Query: 481 SDERLYVNKQNKNSR 495 +DE+LY K++ ++ Sbjct: 394 ADEKLYKAKESGRNK 408 >UniRef50_Q4ZZ43 PAS:GGDEF n=17 Tax=Bacteria RepID=Q4ZZ43_PSEU2 Length = 719 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 17/178 (9%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 LYQ + ++ ++DA+TGL NR+ L +E L + ++ ++ + +D+D KQINDTLGH Sbjct: 275 LYQQLEKQAVTDALTGLLNRRGLYQAVESMLLRNERADKYLVVLFMDLDGFKQINDTLGH 334 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL-----VDSTPQIAAQLPERIEKRL 450 + GD + +A+ K S+R D R+GGDEF +++ + +IA +L ER+ R Sbjct: 335 EAGDQVLLWVAEQFKDSMRPYDVLARIGGDEFTVVIDGLDYPEQAAKIAEKLIERVSGRR 394 Query: 451 QHIAPQKEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNK-----------QNKNSRS 496 Q + +G S GI + L +A+D +Y K QN N R+ Sbjct: 395 QVDGVEITLGASVGIATFPDCGSNLDGLLRAADIAMYEAKRAGRQQYRFYDQNMNGRA 452 >UniRef50_B8G2F8 Diguanylate cyclase n=2 Tax=Desulfitobacterium hafniense RepID=B8G2F8_DESHD Length = 473 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 99/175 (56%), Gaps = 5/175 (2%) Query: 320 ILTALILLNMVRMH-FRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 ILTA I + V + R + ++R +D +TG+ NR+ + + + ++ S +F Sbjct: 293 ILTAFIRVVGVALETIRQREELARLANTDRLTGILNRQGFEQRVREEIASTLRRDSRFLF 352 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD-STPQ 437 + +D+D+ KQ+NDTLGH GD A+ +AQ ++ ++R+ D R GGDEF ++L D + + Sbjct: 353 LVLDLDRFKQLNDTLGHPMGDRALKEIAQNLRCAVREQDIVARTGGDEFTVVLTDIALNE 412 Query: 438 IAAQLPERIEKRLQHIAPQKEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQN 491 + + ER+ K + H+ + +G S G+ E T + Y+ +D+RLY K + Sbjct: 413 ESLTVIERMRKSM-HL-EEYNLGVSIGVAEFPTEGRTYDELYRLADQRLYRGKNS 465 >UniRef50_B8GME9 Putative diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GME9_THISH Length = 306 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 6/166 (3%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 LY+ +D +TGLYNR L L + L L + + + +D+D K+INDTLGH Sbjct: 135 LYRQAVEAAQTDTLTGLYNRAALDHLLPRELAALRRGQQHLALLVVDIDHFKRINDTLGH 194 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK------R 449 GD + A ++++ R+SD R GG+EF +++ +P+ A ERI + Sbjct: 195 SAGDQVLKAAADCLQEATRESDMLFRYGGEEFVMLMSTESPEDALLAGERIRRVLRNCEA 254 Query: 450 LQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 LQ AP + S G+ + D+ + +D+ +Y KQ R Sbjct: 255 LQSAAPGFTLTASIGVAMARPTDSAFSLFDRADQAMYTAKQAGRDR 300 >UniRef50_B6ESW5 Membrane associated GGDEF protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ESW5_ALISL Length = 413 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 86/352 (24%), Positives = 173/352 (49%), Gaps = 39/352 (11%) Query: 156 YYLDLNDRYVYFYEPVN--VEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQ 213 YY ND +++ PV+ ++F+ + ++ S+ E R ++S+IY Sbjct: 86 YYRSYNDEFLFTTRPVDDYKKFFSKDACEVQKTCSLFSS----EFSLKDRILVSNIYDSY 141 Query: 214 RTK-QNVMSLLTPVYVAGQLKGIVLLDINKNN----LRNIFYTHDRPLLWRFLNVTLTDT 268 + ++V+S+ +PVY G + G +D+N + +NI Y D+ L Sbjct: 142 FDESKSVISISSPVYFLGNVIGDYNMDVNIASDFLLNKNIKYMVDKNL------------ 189 Query: 269 DSGRDIIINQSEDNLFQYVSYV--HDLPGGIRVSLSIDILYFITSSW-KSVLFWILTALI 325 + II + ++ F+ SY + + + +I + F +W LF ++ L Sbjct: 190 ---KKIITLEQKNIFFRNFSYSIERTISNNLVIKYNIPMYIFFKDTWFIFFLFVFISYLF 246 Query: 326 LLNMVRMHF--RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 L+ +++ + +S ++ D +T + NR +L+ ++++ + I+ID Sbjct: 247 LVKNIKISNSKKELSEMSEKSNMDELTKISNRTLLS-----KIKEKNDMDDCLSVISIDG 301 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 + +K+IND+ GH GD AI +A +++ R++DY R+GGDEF +IL++ A +L Sbjct: 302 NNIKKINDSFGHHIGDEAIKHIASSMQFVFRENDYLFRIGGDEFLVILMNCPLDKAQELG 361 Query: 444 ERIEKRLQH---IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNK 492 ++++ ++ I I S+GI +N T+ +A K +D +LY +K+N+ Sbjct: 362 YKLKENTKNKPFIINDLSITISTGIVNKDKNMTIDEALKLADVQLYKDKRNQ 413 >UniRef50_B9R0D3 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0D3_9RHOB Length = 405 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 12/169 (7%) Query: 337 YQNVSRENISDA----MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDT 392 ++ ++R N DA +TG +NR+ LE +LQ +G+ I D+D KQ+ND Sbjct: 205 FEQLARNNHEDARRDPLTGTFNRREFLRRLEGQLQP--ATGAHFGLIQFDLDHFKQVNDR 262 Query: 393 LGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH 452 GH GD A+ + QAI+ +R+SD RLGG+EF ++L + + A + ERI + +++ Sbjct: 263 FGHVAGDEALVKVCQAIRHHLRRSDCFARLGGEEFGLLLPNVGQEDAVVIAERIRRLVEN 322 Query: 453 ----IAPQK-EIGFSSGIY-AMKENDTLHDAYKASDERLYVNKQNKNSR 495 AP +I S G+Y E+ T D +K D LY +K +R Sbjct: 323 QSYEFAPDGFQITISGGMYHGTGESLTPTDLFKIVDTGLYTSKNAGRNR 371 >UniRef50_B6BJE3 GGDEF domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJE3_9PROT Length = 648 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 6/156 (3%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +DA+TG++NR+ L++ + + + ++ + ID+D K INDT GH GD AI + Sbjct: 489 TDALTGIWNRRYFFEMLDREISRSQRYDINMSLLMIDIDLFKNINDTWGHDIGDKAIKHV 548 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDS-TPQIAAQLPERIEKRLQHIA-----PQKEI 459 I ++RK + RLGG+EF IIL+++ P + ERI K ++ + +I Sbjct: 549 VNIINSNVRKENIFSRLGGEEFGIILIETKVPYTPQSISERIRKSIEAVPLIIDEKSIKI 608 Query: 460 GFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S GI + NDT + Y SD LY+ K+N +R Sbjct: 609 TVSIGIANIMNNDTANTLYVRSDRALYLAKENGRNR 644 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 11/163 (6%) Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 ++D +TGLYNR+ L++ Q+ + G + + +D D K+INDT GHQ GD+ + Sbjct: 180 GLTDPLTGLYNRRYFEQRLQEEAQRTRRHGDPLACLMLDADHFKRINDTWGHQAGDVVLK 239 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL-PERIEKRLQ----HIAP--- 455 +LA+ ++Q +R D A R+GG+EF ++L STP QL ERI + H++P Sbjct: 240 VLARRVRQQLRGCDVAARIGGEEFAVLL-PSTPVRHVQLVAERIRLAIAGEPVHVSPDCV 298 Query: 456 -QKEIGFSSGIYAMKENDTLHDAYKA-SDERLYVNKQNKNSRS 496 Q + + + A D + A +D LY K+N +R+ Sbjct: 299 LQVSVSLGAAMLAPGAADISPERLMARADAALYQAKRNGRNRT 341 >UniRef50_B3E241 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E241_GEOLS Length = 557 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 10/233 (4%) Query: 270 SGRDIIINQSEDNLFQYVSYVHDLPGGIRVSL-SIDILYFITSSWKSVLFWILTALILLN 328 +GR + QS+ ++ VS+V P +R L + + SS VL L + LN Sbjct: 311 TGRSMTQVQSDTYYWKMVSFVS--PEIVRTKLYGFRKILLLISSVLIVLLAFLARQVALN 368 Query: 329 MVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQ 388 ++ V DA+TGL NR++L L Q + ++ V + +D+D K Sbjct: 369 ALQRE-ETAALVHAMAFRDALTGLPNRRLLEDRLNQSIASADRNAGKVAVLFLDLDHFKA 427 Query: 389 INDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQ-----IAAQLP 443 +NDTLGH+ GD + ++ +++++RKSD RLGGDEF ++L++ T +A ++ Sbjct: 428 VNDTLGHEVGDQLLKQVSGRLQEAVRKSDTVARLGGDEFILLLLNITSHQDVDSVADKVI 487 Query: 444 ERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA-SDERLYVNKQNKNSR 495 + I + Q ++G S GI E+ T ++ A +D+ LY KQ+ +R Sbjct: 488 QAISRPFSIAGQQAQVGTSIGIALYPEDCTDPESLVAFADKALYKAKQSGRNR 540 >UniRef50_B2V8X7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8X7_SULSY Length = 675 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 6/169 (3%) Query: 333 HFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDT 392 + RL + +I D +TGLYNR+ + + ++K ++G + + ID+D K+IND Sbjct: 503 NLRLIEINKELSIRDPLTGLYNRRFALEFMNKEIEKSKRNGKPLSIVMIDLDDFKKINDI 562 Query: 393 LGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH 452 GH GD + + + +K+ +RKSD + R GG+EF +IL +++ + ERI Q Sbjct: 563 HGHSAGDNILKIFSDVLKKELRKSDISCRWGGEEFLLILPETSKDKTLDVIERIRMTFQL 622 Query: 453 -----IAPQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 ++ + + S GI + E+ D + + K +D+RLYV K+ +R Sbjct: 623 NTMGIVSSRPYLTASMGIASYPEDSDNIDEIIKIADDRLYVAKREGKNR 671 >UniRef50_B6FK08 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK08_9CLOT Length = 779 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 29/252 (11%) Query: 263 VTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILT 322 +++T + +++I S++ L D+ + + + Y T W S + +++T Sbjct: 519 LSVTGKEDWKNVICQSSKEYLIDEYQKGQDV-----IEIQFQMQYQGTERWVSCMIYLMT 573 Query: 323 ---------ALILLNMV----RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKL 369 AL++LN + R RL + R D +TGLYN + + + LQ L Sbjct: 574 DNCRNGHIQALMILNDIDKRKREELRLKERAER----DGLTGLYNATTMKMKADNFLQSL 629 Query: 370 VQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCI 429 + +F+ +D+D KQINDT GHQ GD + ++Q + ++ R +D R+GGDEF I Sbjct: 630 WALEGNHIFMLMDLDCFKQINDTFGHQYGDQVLKDVSQTLTKTFRHNDLIGRMGGDEFAI 689 Query: 430 ILVDST-----PQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKEND-TLHDAYKASDE 483 ++++ + QL + + K + E+ S GI E+ T + Y+ SD+ Sbjct: 690 MILNVSDFSVIEHTVQQLLKELHKSYEQNGKTVEVSASLGIVTAPEHGTTFEELYQKSDQ 749 Query: 484 RLY-VNKQNKNS 494 LY V + KN Sbjct: 750 MLYEVKRSVKNG 761 >UniRef50_A4BQ62 Response regulator n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ62_9GAMM Length = 499 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 5/175 (2%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 L+ VR+ + + ++D +TGL N +L + L + ++ + + F +D+D Sbjct: 312 LVRFVRIRAERGRKLRSLMLTDNLTGLLNHTCTKEQLGKELARAIRRQTPLAFAMVDLDD 371 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K +NDT GH GD I LA+ KQ +R+SDY R GG+EF +I+ +ST + + + Sbjct: 372 FKAVNDTYGHPAGDRVIKTLARLFKQRLRRSDYVGRYGGEEFAVIMPESTAEDGKRTLDE 431 Query: 446 IE---KRLQHIAPQK--EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 I R+ IA + FS+G+ A E D D +D+ LY KQ +R Sbjct: 432 IRIAFGRISQIALNGTFQASFSAGVAAFPEIDDSTDLMYWADQALYKAKQTGRNR 486 >UniRef50_A1HSJ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSJ3_9FIRM Length = 653 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 88/160 (55%), Gaps = 7/160 (4%) Query: 343 ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAI 402 + I D +TGLYNR+ + L L + ++G ++ I +D+D K++ND+ GH+ GD+ + Sbjct: 481 QAIRDPLTGLYNRRYMEEVLAMELAQTERTGGTIGVIMLDIDFFKRVNDSYGHEAGDVVL 540 Query: 403 TLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA---PQKEI 459 L + I +S+RK D A R GG+EF +IL ++ + + E++ + +A +K + Sbjct: 541 KRLGRFIAESVRKGDIACRFGGEEFAVILPNTLAEAVCRRAEQLRQGFAGLAIIYREKIV 600 Query: 460 G---FSSGIYAMKENDTL-HDAYKASDERLYVNKQNKNSR 495 G S+G+ + T D + +D RLY KQ +R Sbjct: 601 GPLSLSAGVAVYPGDATSGEDLVRLADSRLYQAKQAGRNR 640 >UniRef50_Q3A5K1 Two component signal transduction response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5K1_PELCD Length = 323 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 6/175 (3%) Query: 326 LLNMVRMHFRLYQ---NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 L N R+H L+Q ++R ++D++TGLYNR + Q + + + G + + +D Sbjct: 123 LKNRERIHA-LHQAQSQLARIALTDSLTGLYNRAYFDATITQEVARCSRRGLPLSLLMVD 181 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K+INDT GH GD A+ +A +K+ R SD R GG+EF +IL ++T AA + Sbjct: 182 LDHFKKINDTYGHLAGDQALAAVALVLKEQSRISDTVCRFGGEEFAVILPETTNANAATV 241 Query: 443 PERIEKRLQHIAPQKEIGFSSGIYAMK-ENDTLHDAYKA-SDERLYVNKQNKNSR 495 ERI K++ + + S G+ + K N L D A +D LY K +R Sbjct: 242 AERIRKKISQLDLAFPVTASIGVGSAKVTNQLLPDHLIAEADGALYEAKSQGRNR 296 >UniRef50_Q1IRY3 Diguanylate cyclase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRY3_ACIBL Length = 276 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 5/162 (3%) Query: 340 VSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGD 399 V ++ +D +T +YNR+ L + + + + + F+ ID+DK +Q+N GH GD Sbjct: 114 VRLQSFTDPLTEVYNRRSLDDMAGRYISSARRRKTDLTFMLIDVDKFRQVNSKFGHLTGD 173 Query: 400 LAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL---QHIAPQ 456 + + +A ++ S+R SD +R GGDEF IIL +ST + A + +RI + L H Sbjct: 174 VVLAEVAALLRTSVRGSDAVVRYGGDEFLIILPESTAEHATHVVDRINRNLTDWNHSGQL 233 Query: 457 K--EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 K E+ S G+ K+ TL + A+D ++Y K + + S Sbjct: 234 KDFELSLSIGVAQWKDGATLDETLDAADHKMYAMKGAQTAHS 275 >UniRef50_C9Y9D6 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D6_9BURK Length = 710 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 10/114 (8%) Query: 336 LYQNVSR--------ENIS--DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +YQ+V+R E ++ D +TGL NR++LT L+Q L V+SG + +D+D Sbjct: 343 VYQDVTRLRRASAEIEQLAFFDPLTGLPNRRLLTDRLQQALVATVRSGRHGALLFMDLDH 402 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 K +NDTLGH GDL + +AQ +K +R++D RLGGDEF ++L+D +P A Sbjct: 403 FKTLNDTLGHDVGDLLLQQVAQRVKGCVREADTVARLGGDEFVVMLLDLSPDAA 456 >UniRef50_A4TQK3 HmsT protein n=39 Tax=Enterobacteriaceae RepID=A4TQK3_YERPP Length = 390 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 34/234 (14%) Query: 281 DNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNV 340 DN + +H P I V L D + ++F I+ LI ++ + R N Sbjct: 149 DNFLAFC--LHTAPSAITVILLDDF-----HNIFRIIFTIMLPLIGFSLHHLMLRRTDNF 201 Query: 341 SRE---------------NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +R+ ++ D +T LYNR+ L +LE L QS + + +D+D Sbjct: 202 TRKLVDHLSNEREKFSDLSMIDPLTSLYNRRGLESKLETLLS---QSPGNHYVLLLDIDH 258 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K ND GH GD A+ ++ AI+ ++R D +R GG+EF ++L + + A+QL ER Sbjct: 259 FKAYNDNYGHTMGDQALVRISAAIRDAVRSRDIVVRYGGEEFLVLLTHVSEEYASQLAER 318 Query: 446 IEKR-----LQHIAPQK---EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 + +R + H+ K + S+GI ++ D L + KA+DE LY K+N Sbjct: 319 VRQRVLGLDIPHVFNHKVSTTVTLSAGISPLQAYD-LAASLKAADEALYRAKRN 371 >UniRef50_A9C2G6 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A9C2G6_DELAS Length = 393 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 9/180 (5%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 + T ++L VR ++ + E D++T L NR+ E RL + SV+ Sbjct: 204 LFTLMLLACTVR---DVFTALREERNHDSLTNLLNRRAFQEAAELRLADPHMAPISVLIG 260 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 D+D K+IND+ GH GD + +AQ ++Q +R D R GG+EF ++L+ +TPQ A Sbjct: 261 --DIDHFKRINDSWGHDCGDRVLQAVAQTLQQHVRNDDLVCRFGGEEFVLLLMRTTPQEA 318 Query: 440 AQLPERIEKRLQH----IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ++ +RI +L +A + + S GI + N L DA +D LY KQ R Sbjct: 319 ERVAQRIRAQLSADGYVLAAGQRVTISFGIAPVAANTALTDALTRADGLLYAAKQAGRDR 378 >UniRef50_C9NTT1 GGDEF family protein n=6 Tax=Vibrio RepID=C9NTT1_9VIBR Length = 464 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 23/189 (12%) Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF--IAI 381 L+LL FRLYQ R ++ D +T L NR+ L+ + SG +F + + Sbjct: 281 LVLLIAFVTIFRLYQAADRRSLHDELTSLPNRRYFMYTLQGHFDAVSHSGKGEVFAILNV 340 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA- 440 D+DK KQINDT GH GD + +A+ IK +R SD R+GGDEF I+L P+I++ Sbjct: 341 DLDKFKQINDTYGHAAGDKVLIAVAERIKSVLRASDVVARIGGDEFLIML----PRISSI 396 Query: 441 ----QLPERIEKRLQH---------IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYV 487 L ++K + H I +GF+ +Y+ D + D K +D R+Y Sbjct: 397 EDVDVLNIELQKAICHTPVIFEQHLINIHVSVGFA--LYSADFKD-VDDMLKLADVRMYE 453 Query: 488 NKQNKNSRS 496 K+ + RS Sbjct: 454 EKRRQAQRS 462 >UniRef50_C5JAW9 Diguanylate cyclase n=1 Tax=uncultured bacterium RepID=C5JAW9_9BACT Length = 342 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 4/163 (2%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 Y+++ + DA+TGL NR++ + + + + +D+D K IND LGH Sbjct: 177 YEDLYDQARRDALTGLVNRRVFEERADVEMAHAQRHKQPLTLACLDLDFFKVINDRLGHA 236 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK---RLQHI 453 EGD A+ ++Q +++R SD R+GGDEF +IL +++ + AA L ER+ K LQ Sbjct: 237 EGDQALKTVSQTFTKTVRDSDLLARVGGDEFAMILPNTSLENAALLMERLCKAVRALQIS 296 Query: 454 APQK-EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 AP +G S GI + D+L ++ +D LY K+ S+ Sbjct: 297 APDSAPLGVSVGIASWNTEDSLESWWQRADAALYRAKEAGRSQ 339 >UniRef50_A1SZ67 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZ67_PSYIN Length = 409 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 22/189 (11%) Query: 313 WKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQS 372 W +LF ++ + + + M +LY RE+ D +T L NR++L L+K Sbjct: 217 WLFLLFAGISLWLQVGQLSMLMKLY----RESTVDPLTKLINRRVLFRLAANDLEK---- 268 Query: 373 GSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILV 432 S+ I D+D+ K+INDT GH GD + +AQ I++ +R+SD R GG+EF IL Sbjct: 269 QSNFCLIMFDLDRFKRINDTYGHGVGDKVLVSIAQVIQRELRQSDIVARFGGEEFVAIL- 327 Query: 433 DSTPQIAAQLPERIEKRLQHIAPQKEIGF----------SSGIYAMKENDTLHDAYKASD 482 P+I + RI +R++ + Q+ + S G+ + N++L + K +D Sbjct: 328 ---PEIGLEQATRIGQRIRRMISQESVQLTDGLVIKTTSSIGVTQKRVNESLDETLKRAD 384 Query: 483 ERLYVNKQN 491 + LY K+N Sbjct: 385 DFLYYAKEN 393 >UniRef50_A4Y784 Diguanylate cyclase n=18 Tax=Shewanella RepID=A4Y784_SHEPC Length = 368 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 9/161 (5%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 +N+S ++D +T LYNR+ ++ + + + S + +D+D+ KQ NDT GHQ Sbjct: 199 ENLSLAAMTDQLTSLYNRRAYEIAIQDHIHRAQEQHSRCSLLIVDIDRFKQFNDTYGHQI 258 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDS----TPQIAAQLPERIEKRLQHI 453 GD + +A A+KQ +R D+ R GG+EF ++L ++ Q+A L ERI +R I Sbjct: 259 GDKVLAYVALALKQCVRGDDFVARYGGEEFVVLLPNTHFHDALQVAETLRERISERHLTI 318 Query: 454 APQKE-----IGFSSGIYAMKENDTLHDAYKASDERLYVNK 489 K+ I S G+ +++E D + +D+ LY K Sbjct: 319 GKDKKLSLGAITVSIGLASLQEGDDAETLFSRADKALYEAK 359 >UniRef50_A4VN66 GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VN66_PSEU5 Length = 396 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Query: 307 YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL 366 +F ++++L+ I + + L MVR R Q ++SD +TG+ NR+ + L Sbjct: 183 FFAFVIFETLLYAIGISFVTLAMVRE--RAEQQYRHASLSDPLTGIGNRRSFIDAGQALL 240 Query: 367 QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE 426 Q+ G V + D+D K++NDT GHQ GD A+ Q I + +R+ D R+GG+E Sbjct: 241 QRCRARGEPVTLLLCDLDFFKRLNDTFGHQAGDRALIDFGQVIARRMRRQDVFGRIGGEE 300 Query: 427 FCIILVDSTPQIAAQLPERIEKRLQHI--APQKEIGFSSGIYAMKENDTLHDAYKASDER 484 F +L D+ + ++ ERI + A Q ++ S G+ L + +D Sbjct: 301 FACLLADADALVGREVAERIRGEFAAMPFAEQGQLSVSIGVATTTSRYELDELMAQADRA 360 Query: 485 LYVNK 489 LY K Sbjct: 361 LYAAK 365 >UniRef50_UPI00016982CA diguanylate cyclase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016982CA Length = 258 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 5/163 (3%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 LY++ DA+TG+ NR + L ++G+ + I +D+D K+IND GH Sbjct: 90 LYRSAINSAFIDALTGVKNRAAFVSNFNRELDLASRNGTELSIIMLDVDYFKRINDKYGH 149 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP 455 GD+ + +A A++ S+R SD R GG+EF I L + + A QL ERI K ++ ++ Sbjct: 150 TVGDMVLKNIALAVEASVRSSDALYRYGGEEFVITLSGTCAEGAYQLAERIRKNVEALSF 209 Query: 456 QKEIG----FSSGIYAMKENDTLHDAYKASDERLYVNK-QNKN 493 G S G+ +++N++ +K +D LY K Q +N Sbjct: 210 SSPKGLQARLSLGVATLQKNESGETLFKRADAALYCAKGQGRN 252 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 12/185 (6%) Query: 316 VLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSS 375 V+ ++ T + VRM + + R +DA+TGL NR LE+ ++ + G + Sbjct: 236 VVRYVATGKDITERVRME----EELKRAATTDALTGLANRLSFEQLLERDYERCRRYGGA 291 Query: 376 VMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDST 435 + + D+D K +ND GH+ GD + LA + ++R +D R GG+EF ++L ++ Sbjct: 292 LSLLMFDLDHFKAVNDAHGHEAGDAVLQALAGLVLANVRTADTVARWGGEEFMVLLPETP 351 Query: 436 PQIAAQLPERIEKRLQ-----HIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQ 490 A +L E++ +R+ H AP + S G+ A++++DT + +DE LY K Sbjct: 352 LAAAGELAEKLRERVAAHRFPHGAP---VTASFGVCALRDDDTCRTLVRRADEALYRAKH 408 Query: 491 NKNSR 495 R Sbjct: 409 LGRDR 413 >UniRef50_A8G0E2 Diguanylate cyclase n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8G0E2_SHESH Length = 340 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 7/155 (4%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGLYNR L EQ Q SS+ + ID+D K +ND GH+ GD + +A Sbjct: 182 DPLTGLYNRLHLESVFEQITQSESSPDSSLFMLLIDLDHFKSVNDNYGHEVGDKVLVRVA 241 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVD----STPQIAAQLPERIEKRLQHIAPQK-EIGF 461 + IKQ+I ++D+ R+GG+EFC++L S ++A +L IE + K Sbjct: 242 ELIKQTIGENDWGFRVGGEEFCLLLPGTNHASVQEVAQRLQLAIEGSAVSVGEHKVSTTA 301 Query: 462 SSGIYAMKENDTLHDA-YKASDERLY-VNKQNKNS 494 S GI E+ L A Y+ +D RLY +Q +N Sbjct: 302 SIGIAQWPESGELMQALYRTADRRLYRAKEQGRNC 336 >UniRef50_Q3ADI8 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADI8_CARHZ Length = 309 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 17/196 (8%) Query: 309 ITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENI--------SDAMTGLYNRKILTP 360 +TS +K L LT +++ ++ +N S E + +D +TGLYNR L Sbjct: 109 LTSIFKPFLTIALTEVLIKVNLKEKTSQRENYSAEEVRELLNLSYTDNLTGLYNRHFLEK 168 Query: 361 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI 420 E + ++ QS + D+D KQ ND+LGH GD A+ +A IK S+RK D Sbjct: 169 EAKIIDRQTSQSNFEYAILMADIDFFKQYNDSLGHLAGDEALKKIAGIIKNSVRKQDKVF 228 Query: 421 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGF--SSGIYAMKEN-DTLHDA 477 R GG+EF I+L +++P+ A Q+ ERI +A E+ S GI +N + + Sbjct: 229 RFGGEEFLILLPETSPEKARQIAERIR---NSVARDLELSLTISIGIGHFPQNGKSFREV 285 Query: 478 YKASDERLYVNKQNKN 493 KA+D LY Q KN Sbjct: 286 LKAADSALY---QAKN 298 >UniRef50_C5SCC9 Diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCC9_CHRVI Length = 364 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 L A + N +R + +V+R+ D +TGL NR+ L+ + EQ L V+ + +A Sbjct: 176 LAAPAIQNALR-----FSHVNRQLERDPLTGLGNRRALSVQGEQWLADSVRHHHPLSMLA 230 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 +D+D+ K +NDT GH GD + +A+ + R +D +RLGGDEF ++L ++ + A Sbjct: 231 LDLDRFKAVNDTYGHPVGDRVLCRVAETLMAVTRTADLCVRLGGDEFVVLLPETGLRAAL 290 Query: 441 QLPERIEKRL-QHIAPQKE-----IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 ERI L QH + I S G+ ++ + +L Y +D LY KQ +++ Sbjct: 291 DCAERIRSALAQHCITTESGSCIAISVSIGVATLQPDMSLDQLYHQADAALYAAKQARDA 350 >UniRef50_A5IN19 Diguanylate cyclase n=5 Tax=Thermotogaceae RepID=A5IN19_THEP1 Length = 491 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 85/164 (51%) Query: 333 HFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDT 392 + L+Q + D +T Y+R + + L ++ + + +D+D LK INDT Sbjct: 327 EYHLHQKYRELALKDPLTEAYSRHYFNEWIFSHMAWLRRNQKKSILVIMDVDGLKMINDT 386 Query: 393 LGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH 452 GH GD A+ + +K+++R+SD R GGDEF ++LVDST AA + +R+E+ L+ Sbjct: 387 YGHLMGDKALVEFVKTLKRTVRESDLVFRYGGDEFLLVLVDSTKDNAASVLKRVEENLKD 446 Query: 453 IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + +I FS G + + A +D+ LY NK K S Sbjct: 447 VDLPFKIEFSFGYEEIDGFMPIERALARADDLLYKNKFKKRGGS 490 >UniRef50_C5EJU6 Response regulator pleD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJU6_9FIRM Length = 314 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 86/155 (55%), Gaps = 6/155 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGLYNR+ + +L + ++ + +F +D+D K++NDT GH GD+A+ +A Sbjct: 155 DGLTGLYNRRYVVGDLLEDMRSCGKEAVETVFAMVDIDDFKRVNDTYGHDAGDMALVCIA 214 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL-QHIAPQKEIGFSS-- 463 ++ + R+ +R GG+EF IIL + T A + ERI +++ Q + P + FS Sbjct: 215 NILESNCREH-RVVRWGGEEFLIILFNVTVDEAFDICERIRRQVEQFVVPYGKEWFSCTI 273 Query: 464 --GIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 G++ K ++ L + +D+ LY K+N ++ Sbjct: 274 TLGLHVFKPHEALEECISCADKALYYGKRNGKNQG 308 >UniRef50_D0KZW3 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZW3_HALNC Length = 547 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 LL MVR Y+ E SD++TGL N + +E + + + + + ID+D Sbjct: 356 LLKMVRYRALRYRQSMAEKRSDSLTGLLNHNAIKDLVEAEIDRANRQNQPLSVVLIDIDH 415 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K +NDT GHQ GD+ I L+ + +R+ D R GG+EF I L ++ Q AA L R Sbjct: 416 FKNVNDTFGHQAGDIVIRKLSNLLNTRLRRYDGVGRYGGEEFMITLPNTDEQTAAHLINR 475 Query: 446 IEKRLQHIAPQKEIG------FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + A + E G FS+GI + L +A+D+ LYV K N +R Sbjct: 476 LRVQFGQSAIRTENGSNMLCTFSAGIASFPRFLDLTSLIEAADQHLYVAKANGRNR 531 >UniRef50_Q7MFB4 GGDEF family protein n=2 Tax=Vibrio vulnificus RepID=Q7MFB4_VIBVY Length = 387 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 90/165 (54%), Gaps = 4/165 (2%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 RL N+ + ++ D +T +YNR+ + + + L + + G+ + I +D+D K+IND G Sbjct: 216 RLITNIYQTSLRDTLTNIYNRRAMEEMIPRELSRASRLGAELSIIILDLDHFKRINDQYG 275 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH-- 452 HQ GD ++ + Q + +RK D + R+GG+EF ++L D+ + A + E++ +++ Sbjct: 276 HQVGDQTLSGIGQLLTSQLRKQDISFRIGGEEFLVVLPDTPIESAVLVAEKLRQKIAETR 335 Query: 453 IAP-QKEIGFSS-GIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 AP Q+E +S G+ + D K +D LY+ K +R Sbjct: 336 FAPKQRETWTASFGVAQLITGDDWDALMKRADAALYLAKHKGRNR 380 >UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geobacter RepID=C6E9C6_GEOSM Length = 713 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 8/160 (5%) Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 +++DA+TGLYNR+ L LE+ L + ++ G ++ I ID+D K ND GH GD A+ Sbjct: 513 SVTDALTGLYNRRFLKNRLEEELNRSIRQGLNLTVIFIDLDFFKNYNDLCGHLAGDDALR 572 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-------PQ 456 + A+ IK S+R D R GG+EFC +L ++ A + ERI ++ PQ Sbjct: 573 ITAEIIKASLRDMDIVARYGGEEFCAVLPGTSKVEAMIVAERIRSEIEREKFPGESEIPQ 632 Query: 457 KEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + S G+ + E+ T ASD LY K +R Sbjct: 633 VRLTASLGVASFPEDGRTFTALVHASDVALYEAKAGGRNR 672 >UniRef50_UPI0001C35996 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35996 Length = 598 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 6/164 (3%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + +S+E +D +TGL NR+ L + L + D++ LK++NDT GH+E Sbjct: 284 KKLSKEASTDELTGLLNRRGGKNRLAEMLNMARHQEEVLTVCMYDVNSLKKVNDTFGHRE 343 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK 457 GD + ++A +K + + D+A RL GDEF I T Q A +L + +E+RL + Q Sbjct: 344 GDNLLRVIANMVKSVLTERDFACRLSGDEFLITFAGKTEQEADELIKLVEERLLAVRRQD 403 Query: 458 ----EIGFSSGIYAMKENDTLH--DAYKASDERLYVNKQNKNSR 495 E+ F +GI +K T+ D + DER+Y K+ + R Sbjct: 404 RIPYELSFCTGILELKPEHTMSVTDILREVDERMYDQKRQYHMR 447 >UniRef50_D0KYN2 Diguanylate cyclase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYN2_HALNC Length = 311 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 6/160 (3%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 L+Q E D +TGL NR++ E+ + + V+ + +D++ LK INDT GH Sbjct: 144 LFQKALFEANQDPLTGLKNRRVFDTEIAREQARFVRYNIKSSLVVMDLNGLKSINDTWGH 203 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL---QH 452 GD AI L + ++Q +R +D A R GGDEFC IL + A ++ ER+ L + Sbjct: 204 DVGDRAIRLFSNGLQQVLRDTDQAFRFGGDEFCAILPATNLYGAKKMAERMSAWLDAHEL 263 Query: 453 IAPQKE---IGFSSGIYAMKENDTLHDAYKASDERLYVNK 489 P E + S G+ ++N + ++ +D+ LY NK Sbjct: 264 SLPSGELINVRTSFGLAEAEKNSDEKEWFRRADQSLYHNK 303 >UniRef50_C4UJR8 Diguanylate cyclase n=4 Tax=Enterobacteriaceae RepID=C4UJR8_YERRU Length = 372 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 90/180 (50%), Gaps = 10/180 (5%) Query: 326 LLNMVRMHF--RLYQN---VSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 LL V H RL +N + R ++ D +TGLYNR+ +L + + + Sbjct: 188 LLGWVTFHTAKRLVENKEELLRISVRDGLTGLYNRRHWEHQLHNQFDSCRRYKHCSSLVL 247 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 ID+D+ K INDT GH GD AIT+LA+ + +R D R GGDEF IL ++T + A Sbjct: 248 IDIDQFKTINDTYGHTVGDDAITVLAEELLLGLRAIDIVGRYGGDEFGAILPNTTAEQAR 307 Query: 441 QLPERIEKRLQHI----APQKEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNSR 495 ++ RI+ +L I +P ++ S+G+ K E KA D LY K N R Sbjct: 308 EVLTRIQGKLAEIEFKQSPGLQLKISAGVAEFKPEMANYQQWLKAVDSALYHAKNNGRDR 367 >UniRef50_B2A7Y1 Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A7Y1_NATTJ Length = 593 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 7/148 (4%) Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITL 404 I D++T LYNR L EL RL V++ + I D++ LK INDT GHQ GD A+ Sbjct: 261 IHDSLTSLYNRAYLEKEL-TRLD--VKTQLPISIIIADVNGLKLINDTYGHQVGDRALKR 317 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK-EIGFSS 463 +A A++++ RK D R GGDEF I+L + Q A Q+ ERI + ++I + ++ F+ Sbjct: 318 VADALRKACRKEDIISRWGGDEFVILLPKTNKQAANQIAERIREVSENIVKKSIKVNFAV 377 Query: 464 GIYAMKEN--DTLHDAYKASDERLYVNK 489 G A KEN + +K +++ +Y NK Sbjct: 378 GT-ATKENIDKPFKEIFKEAEDSMYKNK 404 >UniRef50_A8F535 Diguanylate cyclase n=1 Tax=Thermotoga lettingae TMO RepID=A8F535_THELT Length = 535 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 5/150 (3%) Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQ-SGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 I+D +TG Y R T E R Q +++ G ++ I ID+D+ K IND GH GD + Sbjct: 383 ITDPLTGCYTRYYFT-EYFDRFQGIIERKGGTISLIMIDVDRFKTINDKYGHIVGDKVLR 441 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH-IAPQ--KEIG 460 + Q + + +RK D +R GGDEF I+L D+ A ++ R+ KR+ I P+ ++I Sbjct: 442 EIGQTLTKCVRKMDLVVRYGGDEFLIMLSDTDKSKAKRIANRLAKRVSEIIIPELDEQIT 501 Query: 461 FSSGIYAMKENDTLHDAYKASDERLYVNKQ 490 S GI + +L D K +D +Y K+ Sbjct: 502 ISFGISVYDGSKSLEDVLKIADRTMYKQKR 531 >UniRef50_Q2BPL4 Signal transduction histidine kinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPL4_9GAMM Length = 427 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 94/171 (54%), Gaps = 11/171 (6%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 L + + + ++D++TGL+NR+ + +++ + S I +D+D KQ NDT GH Sbjct: 253 LEEKIEKLAVTDSLTGLFNRRNFEYLSDSLIERAKRENSFFCLIILDIDHFKQYNDTYGH 312 Query: 396 QEGDLAITLLAQAIKQSIRK-SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 EGD + ++Q +++++R+ +DY R+GG+EF +I + T A L ERI+ ++ +A Sbjct: 313 LEGDEVLKKISQTLRKNVRRGNDYCFRVGGEEFAVIFTERTKGAATALAERIKNEVESLA 372 Query: 455 -PQKEIGFSS------GIYAMK---ENDTLHDAYKASDERLYVNKQNKNSR 495 P K G S G+ K + D + Y+ +DE LY K++ ++ Sbjct: 373 IPHKHNGASQYVTISLGLMMTKDFTDEDPISAIYQHTDELLYKAKESGRNK 423 >UniRef50_C0FUN6 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUN6_9FIRM Length = 704 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 91/153 (59%), Gaps = 7/153 (4%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVM-FIAIDMDKLKQINDTLGHQEGDLAITL 404 +DA+TGLYNR+ + +++Q+ ++ V I+ID+DK KQ+NDT GH EGD + Sbjct: 544 TDALTGLYNRRAAEDHITRQMQEDGRNPGCVRPLISIDLDKFKQVNDTYGHLEGDALLIA 603 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP-QIAAQLPERIEKRLQHIAPQKE----I 459 +A ++ S+R SD R+GGDEF + L + T Q A + E++ + ++ ++ K+ I Sbjct: 604 VADTLRTSVRSSDIVGRIGGDEFVVYLSNVTDRQNAMAVAEKLCQVIRELSTMKKEWSNI 663 Query: 460 GFSSGI-YAMKENDTLHDAYKASDERLYVNKQN 491 S GI +A N + + Y ++D+ +Y K+N Sbjct: 664 SASIGISFADHPNIKMEELYISADKAMYSAKEN 696 >UniRef50_C6MBM6 Diguanylate cyclase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBM6_9PROT Length = 637 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 5/159 (3%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 Q +S + D +TG NR+ E+ + +L +S ++ F +D+D KQ+NDT GH Sbjct: 451 QEMSEQVQEDHLTGALNRRGFDKAFEREITQLARSQGTLCFALLDIDNFKQLNDTHGHHV 510 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ-----H 452 GD A+ L +A+K+++R+ D R GG+EF I+L +S + A RI + L H Sbjct: 511 GDDALKYLVEAVKETVRRDDVISRYGGEEFAILLPNSGLKAAISTVARIRRYLTKKFFLH 570 Query: 453 IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 + I FS+G+ + ++ +K +DE LY K+N Sbjct: 571 GNNRLLITFSAGVAQYQPGESQESLFKRTDEALYFAKRN 609 >UniRef50_B8HS15 Diguanylate cyclase with GAF sensor n=5 Tax=Bacteria RepID=B8HS15_CYAP4 Length = 314 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 14/169 (8%) Query: 333 HFRLYQNVSRENISDAMTGLYNRK----ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQ 388 R + E ++D++T LYNR+ +L E E R Q+ G +AID+D LKQ Sbjct: 155 QIRQIERAQAEALTDSLTSLYNRRGWDQLLAAE-ETRCQRY---GHPACVVAIDLDGLKQ 210 Query: 389 INDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 INDT GH +GD I +AI++ +R+ D R+GGDEF ++ V+ A L ERI Sbjct: 211 INDTQGHGKGDELICRAGRAIRKVLRQQDVLARIGGDEFVVLGVECDALSAKNLIERIYA 270 Query: 449 RLQHIAPQKEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNSRS 496 L + + +G AM++ L A + +D+ +Y KQ + ++ Sbjct: 271 SLSAVQVEASVGL-----AMRDPRQGLCHAVEQADQAMYACKQTRKTKC 314 >UniRef50_C9RA00 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9RA00_AMMDK Length = 307 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 83/165 (50%), Gaps = 6/165 (3%) Query: 334 FRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTL 393 F YQ + D +TGL NR ELE RL++ V FI D+D LK+ ND Sbjct: 116 FYWYQRLQYLTCHDCLTGLPNRAYFEAELE-RLKEAF--AYPVSFIVCDLDNLKEANDNQ 172 Query: 394 GHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL-QH 452 GH GD + A+ IK+S+R+SD R+GGDEF +IL + Q A ++ RI+KR+ H Sbjct: 173 GHSFGDELLRAAAKLIKESVRESDVVARIGGDEFVVILPRTERQAALKVARRIKKRMAAH 232 Query: 453 IA--PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + P + S G+ L + +D +Y +K + R Sbjct: 233 NSQFPHIPLSISVGVGTASSPGRLREGLDEADRAMYRDKVQRKER 277 >UniRef50_Q1ZLF7 Putative uncharacterized protein n=4 Tax=Photobacterium RepID=Q1ZLF7_PHOAS Length = 285 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 2/158 (1%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 YQ V R + D ++GL NR ++ + + ++ D+D KQ+ND GH Sbjct: 128 YQKVKRMALKDKLSGLCNRMCFEQDIHHAIAMSEKRDVELVLFICDLDNFKQVNDNFGHL 187 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--IA 454 +GD I A A+K + R SD R+GGDEF I+L ++ + ++ RI + +Q I Sbjct: 188 DGDKVIKDFANALKFATRTSDRCYRIGGDEFIILLQPASARSEIKVASRINQYIQQSPIL 247 Query: 455 PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNK 492 IGFS G + D++ + +D +LY +K+NK Sbjct: 248 GILNIGFSYGTATFNQGDSMLSLIERADRKLYHHKRNK 285 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 6/174 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 +++ + +L + + ++NI DA+TGLYNR+ L L++ L++ + S+ I ID+D Sbjct: 308 ISLALANIKLCETLKQQNIRDALTGLYNRRYLEESLKKELERAKRKERSLGIIMIDVDHF 367 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL----VDSTPQIAAQL 442 K +NDT GH +GD + L +++ IR SD A R GG+E +IL +++T Q A QL Sbjct: 368 KNVNDTFGHDKGDQVLKKLGGFLQRHIRGSDIACRYGGEELTLILPEASLENTRQRAEQL 427 Query: 443 PERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDA-YKASDERLYVNKQNKNSR 495 + + K L + S GI E+ A K +D+ LY KQ R Sbjct: 428 RQAV-KNLDLDLCDHTLTISVGIACFPEHGYSGKALLKTADQALYQAKQQGRDR 480 >UniRef50_B4U5Q5 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5Q5_HYDS0 Length = 497 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 5/154 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 DA+TG+YNR+ E+ +++ ++ + + D+D K++NDT GH GD+ + A Sbjct: 329 DALTGIYNRRFFFEEINISIEQAKRANVPICIVMYDIDNFKKVNDTYGHDMGDVVLKDFA 388 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI-----APQKEIGF 461 I SIRKSD RLGG+EF L ++ + ++ I + ++ + Sbjct: 389 NVIVSSIRKSDIPARLGGEEFAAYLYNTDIENGFRVANNIRQNFENSTHTLNGTTIKCTC 448 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S GIY +++ D + A K DE LYV K+ +R Sbjct: 449 SGGIYQIQQEDGIDSALKKVDEALYVAKRTTKNR 482 >UniRef50_A3ZRB0 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZRB0_9PLAN Length = 300 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 11/200 (5%) Query: 303 IDILYFITSSWKSVLF---WILT--ALILLNMVRMHFRLYQNVSRENI---SDAMTGLYN 354 ID +F+ S+ V W+ T A L +V + +RL RE + D++TGL N Sbjct: 91 IDDTFFLHSTSPGVTLTEVWLTTVHACFFLAIVSVIWRLRCAYERERVFARIDSLTGLLN 150 Query: 355 RKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIR 414 E+ + +SGS + ID D KQ+NDTLGH+ GD + +A+ + QS+R Sbjct: 151 ITAFNDTAEREAARCRRSGSPLTVAFIDCDNFKQVNDTLGHRTGDRLLKQIARTLCQSVR 210 Query: 415 KSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK--EIGFSSGIYAMKEND 472 + D RLGGDEF ++L ++ A + +R+ RL + + FS G+ D Sbjct: 211 EMDAVARLGGDEFALLLPNANRDQAEIVIKRVRARLSDAMSTENWPVTFSIGVAVYHNPD 270 Query: 473 TLHDA-YKASDERLYVNKQN 491 DA +D+ +Y K N Sbjct: 271 ADADALLHGADQLMYDVKHN 290 >UniRef50_Q6ARU5 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ARU5_DESPS Length = 363 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +T L N+ EL + L + + G + I D+DK K +ND+ GH+ GD + ++A Sbjct: 206 DGLTKLLNQHAFYSELRRELARAQRRGYCTVLIYFDLDKFKALNDSEGHRRGDEVLVMVA 265 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIY 466 ++K S+R ++ R GGDEFCIIL +ST + A ++ +R+ K L+ + S GI Sbjct: 266 NSMKASLRDNELCARYGGDEFCIILPESTLKEAEKVCQRLCKELEKSLVGTGVSCSMGI- 324 Query: 467 AMKENDTLHDA---YKASDERLYVNKQ 490 A+ + HDA K +D+ +Y K+ Sbjct: 325 AISDTANSHDADTLVKEADKAMYEAKK 351 >UniRef50_D2TII3 Diguanylate cyclase YddV n=13 Tax=Enterobacteriaceae RepID=D2TII3_CITRO Length = 460 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 7/167 (4%) Query: 336 LYQNVSRENIS-DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 L++ VSR + D +T L NR+ L ++ + ++G+ + + ID+DK K+INDT G Sbjct: 286 LFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRAGTPLSILIIDVDKFKEINDTWG 345 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GD + ++QA ++R SDY R GGDEF I+L ++T ++ ERI R++ Sbjct: 346 HNTGDEILRRVSQAFYDNVRSSDYVFRYGGDEFIIVLTEATQADTLRIAERIRLRVEKTK 405 Query: 455 PQKEIG------FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + G S G + + +DE LY K+ +R Sbjct: 406 IKSPDGATIPLSLSIGAAMFNGHPDYERLIQIADEALYTAKRQGRNR 452 >UniRef50_Q72KK2 Putative response regulator n=1 Tax=Thermus thermophilus HB27 RepID=Q72KK2_THET2 Length = 229 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 6/151 (3%) Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITL 404 ++ +TGL NR+ L LE+ ++ + G + +D+D K++ND GH+EGD + Sbjct: 75 LTCPLTGLPNRRALEMALEREAARVERGGPPFALVLVDLDGFKRVNDEGGHREGDRYLRR 134 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSG 464 +A+A+ +R+ D R GGDEF ++L+ + + A ++ ER+ +RLQ +G + Sbjct: 135 VARALVSGVRRGDLVARWGGDEFAVLLLGTGEKEAVEVAERLGRRLQEEGVSASLGVA-- 192 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +YA L D + +D+ LY K R Sbjct: 193 VYA----GDLEDLFLRADQALYRAKALGKGR 219 >UniRef50_A0L4P1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P1_MAGSM Length = 809 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 +L A+I + V R+ + + + D +TGLYNR + ++ + ++ Sbjct: 370 VLGAIITVKDVTEQQRMSEKIRYQARHDHLTGLYNRHAFADLCRESMEAM-KADEVHCLC 428 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 ID+D+ K INDT GH+ GD+A+ ++ I+ +RK DYA R+GGDEF I L D + Sbjct: 429 VIDLDRFKAINDTCGHKAGDMALKQISTMIQGCVRKYDYAARIGGDEFTIFLADCSQADG 488 Query: 440 AQLPERIEKRLQHI-----APQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 ++ E++ +++Q Q +GFS GI + +++A+D ++ K + Sbjct: 489 VKVMEKLLEQVQDYRFLWEGQQFNLGFSIGICEIHFQVPFEKSFQAADAAVFQAKDD 545 >UniRef50_A7HJ20 Diguanylate cyclase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJ20_FERNB Length = 501 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 2/152 (1%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL R + ++E+ + I+ID D K+INDT GH EGD + + Sbjct: 347 DTLTGLLTRYVFNSQIERLYVSSKADKIPLSAISIDADNFKKINDTYGHAEGDEVLKKIG 406 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE--IGFSSG 464 + I ++IR SD+ IR+GG+E I+L ++ A + ERI ++Q K + S G Sbjct: 407 EIILKNIRLSDFPIRMGGEEILILLPEADINAAYSIAERIRNKVQEEFKSKPYTVTISLG 466 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + +K DT+ K +D+ LYV+K N +++ Sbjct: 467 VTQLKPEDTIETFLKRADDALYVSKTNGKNQT 498 >UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUP2_DESOH Length = 1644 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 68/115 (59%) Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 +SR+ ++D +TGLYN L+Q L + G + I ID+D K+ NDT GHQ G Sbjct: 1476 ELSRKAVTDGLTGLYNHDYFQNMLQQELLLAKRKGRELSMIMIDIDHFKRFNDTWGHQAG 1535 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI 453 D+ + +A I++S R SD R GG+E ++L ++ P+ A L E+I +R++ + Sbjct: 1536 DMVLREVAAEIRESCRSSDVVARYGGEEMALLLHETGPEAAFALAEKIRRRVEAL 1590 >UniRef50_B5YAD1 Ggdef domain protein n=2 Tax=Dictyoglomus RepID=B5YAD1_DICT6 Length = 471 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 88/149 (59%), Gaps = 10/149 (6%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +T LYNR+ L E++ + ++ + + + +D+D K+IND GH+ GD + +A Sbjct: 328 DPLTRLYNRRFL----EEKYGYIKRNYDTFVLVFVDLDNFKEINDRWGHELGDKVLIEVA 383 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFS-SGI 465 + +++ R+ D+ +R GGDEFCIILV+ + A ++ ERI+ + + I GF+ S Sbjct: 384 EFFRRNFREYDFVVRYGGDEFCIILVNVDKEKAERILERIKNKFE-IEILNFFGFNLSFT 442 Query: 466 YAM----KENDTLHDAYKASDERLYVNKQ 490 Y + K+ ++L K +DER+Y +K+ Sbjct: 443 YGVAEYPKDGESLDTLVKIADERMYKHKK 471 >UniRef50_Q5PLI4 Cellulose synthesis regulatory protein n=77 Tax=Enterobacteriaceae RepID=YEDQ_SALPA Length = 570 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 22/221 (9%) Query: 290 VHDLPGGIRVSLSIDILYFITSSWKSVLFWIL-TALILLN------MVRMHFRLYQNVSR 342 VH L GI+ + F + S L W+L TA++L++ +V+ F L ++ Sbjct: 344 VHTLREGIQGN-------FGSISIALTLLWVLFTAMLLISWGVIRHIVKNMFVLQNSLQW 396 Query: 343 ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAI 402 + D +T LYNR L + + ++ ++ I +D+D K +ND GHQ GD + Sbjct: 397 QAWHDPLTRLYNRGALFEKASRLAKRYREARQPFSVIQLDLDYFKSVNDRFGHQAGDRVL 456 Query: 403 TLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL--QHIAPQK--- 457 + A I +IR D A R+GG+EFCI+L +T A Q+ ERI +R+ + I K Sbjct: 457 SHAAGLIGSTIRAHDIAGRVGGEEFCIVLPGATKAQALQIAERIRQRINDKEILVTKSTT 516 Query: 458 -EIGFSSGIYAMKE--NDTLHDAYKASDERLYVNKQNKNSR 495 I S GI + +E + +D+RLY KQ+ +R Sbjct: 517 LRISASMGISSAEEYGDYDFEQLQSLADKRLYYAKQSGRNR 557 >UniRef50_C7RL44 Diguanylate cyclase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RL44_9PROT Length = 243 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 86/152 (56%), Gaps = 4/152 (2%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +DA+TG NR+ ++ + + ++GS + ID+D K++NDTLGHQ GD A+ L Sbjct: 87 TDALTGALNRRGFDDAYQREVARARRNGSRLALALIDLDDFKRLNDTLGHQAGDEALVHL 146 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-PQKE--IGFS 462 A+ ++ ++R SD R GG+EF ++L ++ AA R ++ L A P ++ + FS Sbjct: 147 AKGLRAALRPSDILCRFGGEEFVLLLPETGLSEAATAIARFQRHLAANALPDRDVVVTFS 206 Query: 463 SGIYAMKENDTLHDAYKASDERLYVNKQ-NKN 493 +G+ ++L D+ + +D Y K+ KN Sbjct: 207 AGVVVQGPGESLEDSLQRADAATYAAKRAGKN 238 >UniRef50_B0TAR1 Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TAR1_HELMI Length = 999 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 7/170 (4%) Query: 333 HFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDT 392 + RL + R ++ D +TGL+NR+ L LE L + ++ I D+D+ K NDT Sbjct: 822 NMRLIDHNRRLSLIDPLTGLHNRRYLEQTLENLLVRSRETERPFCLIMADIDQFKGFNDT 881 Query: 393 LGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH 452 GH GD A+ ++A ++ +R+ D A+R GG+E +IL+ + ++A + +RI KR++ Sbjct: 882 FGHDAGDKALRMVAANVRNCLREEDIAVRFGGEEITVILMGVSKELAVTIADRIRKRIEQ 941 Query: 453 IAPQ------KEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 + + I S G+ A E+ TL + +D LY K+ +R Sbjct: 942 TPIEIGDGQLQYITLSMGVSAFPEDGKTLEKLIQRADLALYEAKRLGKNR 991 >UniRef50_C4XU30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XU30_DESMR Length = 410 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 3/162 (1%) Query: 332 MHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIND 391 +H ++++ ++R+ SD +TG+ NR L L + + V + D+D+ K +ND Sbjct: 244 LHVKIHEELARQRESDELTGIPNRAFLRRHGPALLSLSARREAPVALLFCDLDRFKAVND 303 Query: 392 TLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ 451 T GH+ GDL + +A+A+ +R D RLGGDEF +++ D+ AA + ERI + Sbjct: 304 TFGHEAGDLVLGDVARAMAARVRVYDLLARLGGDEFVVVMPDAGADEAAVMAERIRDCVA 363 Query: 452 HIAPQK---EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQ 490 +A ++ + S G+ + D +A+D +Y K+ Sbjct: 364 EVAAERGLPGLSVSIGVALHAPGQDIDDLVRAADAAMYREKR 405 >UniRef50_B5W7J6 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Arthrospira RepID=B5W7J6_SPIMA Length = 1651 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 68/114 (59%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L++ + +L + + E+I D +TGL+NR+ L L Q L K + + I ID+D Sbjct: 1469 LSLALFNLKLQEQLRLESIRDPLTGLFNRRYLQETLNQALAKANRKNEPLCIIMIDIDHF 1528 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 K NDT GH+ GDL + +A I+ +IR SD A R GG+E +IL ++T +IA+ Sbjct: 1529 KHFNDTFGHEAGDLVLQEIAHFIQTNIRSSDTACRYGGEEMTLILPETTLEIAS 1582 >UniRef50_Q0W2L1 Putative signal transduction protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2L1_UNCMA Length = 810 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 9/152 (5%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSS--VMFIAIDMDKLKQINDTLGHQEGDLAITL 404 D +TGL+NR EQ L +L + S+ V +A D+D LK INDTLGH GD + + Sbjct: 475 DGLTGLHNRAYF----EQELGRLESASSAFPVSIVAADVDGLKLINDTLGHTAGDQHLKV 530 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE---KRLQHIAPQKEIGF 461 I S R GGDEFCI+L A ++ E + +R P + Sbjct: 531 AGNMISAVFSASGDVCRTGGDEFCILLPGCGEAAAGKMLELLREEIRRYNERQPGPPLSI 590 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKN 493 S+GI A+ ++L+DAYK +D +Y +K ++ Sbjct: 591 STGIAAINPGESLYDAYKRADRLMYEHKLKRD 622 >UniRef50_A4XHJ0 Diguanylate cyclase n=3 Tax=Bacteria RepID=A4XHJ0_CALS8 Length = 581 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 6/155 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGLYNR+ EL + G DMD LK +ND GH GD AI ++A Sbjct: 427 DELTGLYNRRYFIKELIMESLSCDRYGGKFCLAFFDMDNLKLLNDFYGHSMGDKAIRMIA 486 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ---KEIGFSS 463 +AIK +IRK+D RLGGDEF +I + + + E I+K ++ + + K+I S Sbjct: 487 RAIKDNIRKTDVPARLGGDEFAVIFKNCSKEDIENRIENIKKLIEEESEKQLPKKIRVSC 546 Query: 464 GIYAMKENDT--LHDAYKASDERLYVNKQNKNSRS 496 G+ A+ +DT L + K +D R+Y K S Sbjct: 547 GV-AVYPDDTKSLDELLKIADMRMYEEKLKNKGES 580 >UniRef50_C1SP05 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP05_9BACT Length = 303 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 6/164 (3%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + E +D +T + NRK L +R+ + + G +D+D K +NDT GH Sbjct: 136 EKLKEEVYTDTLTSIGNRKYAEITLTRRINEWLDVGIPFSVFFLDIDDFKTVNDTYGHDT 195 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER----IEKRLQHI 453 GD + ++ +++ ++R D A R GG+EF II + TP + ER IEK H Sbjct: 196 GDKVLKMVGKSLTGTLRSMDVACRWGGEEFVIIAPNLTPASTRAVAERLRIFIEKSWIHA 255 Query: 454 APQKEIGF--SSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 KEI S G K NDT K +D +Y +KQ+ +R Sbjct: 256 GDNKEISITVSVGCTVCKGNDTPESVIKRADSAMYKSKQSGKNR 299 >UniRef50_D0XBU8 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XBU8_VIBHA Length = 543 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 6/149 (4%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +T L+NR+ L ++ Q L S I ID+D K +NDT GH GD + +A Sbjct: 386 DPLTNLFNRRALINQVHQELVNKAMHSHSTSLILIDLDYFKAVNDTFGHDVGDQVLMHVA 445 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDS----TPQIAAQLPERIEKRLQHIAPQKEIGFS 462 + ++RK D R GG+EF I+L D+ + QIA L E++ L++ +P + FS Sbjct: 446 DFLSANVRKQDLIARWGGEEFVILLRDTSIEQSEQIATNLQEKM--TLENFSPVTSMTFS 503 Query: 463 SGIYAMKENDTLHDAYKASDERLYVNKQN 491 +G+ + + D +D+ LY K++ Sbjct: 504 AGVATLSAGQSFDDLIANADKALYTAKKS 532 >UniRef50_C5T000 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T000_ACIDE Length = 350 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 12/174 (6%) Query: 334 FRLYQNVSREN-------ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 +RL + VSR+N DA+TGLY R + E L+ +G + +D+D Sbjct: 164 YRLIRQVSRQNQLLDELRRIDALTGLYGRGHWQEQAEAALRLHHATGEPACLVMLDIDHF 223 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL----VDSTPQIAAQL 442 KQIND GH GD AI LA ++ ++R +D A R GGDEF I+L +D +A ++ Sbjct: 224 KQINDLHGHTVGDEAIRALAHIVRSNVRTTDCAGRYGGDEFAIVLRGMHMDKALAVAQRI 283 Query: 443 PERIEKRLQHIAPQKEIGFSSGIYAM-KENDTLHDAYKASDERLYVNKQNKNSR 495 E+++ H P+ + S G+ A + +L A+D LY K + +R Sbjct: 284 CEQVQAMRLHDMPELQFTSSLGVAAADHRHSSLRAWTDAADAELYQAKASGRNR 337 >UniRef50_A8GB07 Diguanylate cyclase n=7 Tax=Enterobacteriaceae RepID=A8GB07_SERP5 Length = 353 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 5/163 (3%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 Q + R ++ D +TGLYNR+ L + + S I +D+D K INDT GH Sbjct: 183 QELLRISMRDGLTGLYNRRHWEHLLHHQFDSCRRYQHSATLILMDIDHFKTINDTFGHAL 242 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI---- 453 GD A+ +LA+ + +R D R GGDEF +L +++ + A+ RI++RL I Sbjct: 243 GDEALAVLAEELLIGLRAVDIVGRYGGDEFGAVLPNTSAEQASIALLRIQERLNEIVFRE 302 Query: 454 APQKEIGFSSGIYAMKENDTLH-DAYKASDERLYVNKQNKNSR 495 APQ + S+GI + + + D KA+D LY K N +R Sbjct: 303 APQLRLNISAGIADYHGDMSGYLDWLKAADNALYRAKNNGRNR 345 >UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors n=2 Tax=Synechococcus elongatus RepID=Q31K54_SYNE7 Length = 1099 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 90/170 (52%), Gaps = 7/170 (4%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L + + +L + + +EN+ D +TGL+NR+ L EQ L + +SG S+ + +D+D Sbjct: 892 LALAIANLQLRETLRQENLRDPLTGLFNRRYLQEFFEQELARAKRSGDSIGILMLDIDYF 951 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K+ ND GH GD+ + +A+A+ +R SD R GG+E I++ ++ +++A+ ++I Sbjct: 952 KRFNDEFGHDAGDMVLKQVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQI 1011 Query: 447 EKRLQ------HIAPQKEIGFSSGIYAMKENDTLHDAY-KASDERLYVNK 489 + + H + S G+ A E+ D K++D LY K Sbjct: 1012 RQAIAQLIISYHEQTLPSLTISIGVAAFPESGLASDTLIKSADTSLYQAK 1061 >UniRef50_A6VUN1 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VUN1_MARMS Length = 345 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 15/184 (8%) Query: 318 FWILTALILLNMVRMHF-----RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQS 372 FW+ T++I + F L Q + ENI D +TGL+NR+ L + L + Sbjct: 154 FWLTTSIIFSGVFGRFFLKRYTELTQQLKNENIQDPLTGLFNRRGLNLHFTKELDSADTT 213 Query: 373 GSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILV 432 S + I ID+D K+IND GH GD+ + +A + Q+IRK+D R GG+EF IIL Sbjct: 214 SSPLSLILIDIDYFKKINDMYGHDIGDVCLIEIANTLSQAIRKNDIIARFGGEEFIIILP 273 Query: 433 DSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAM-------KENDTLHDAYKASDERL 485 ++ + E+++ I+ QK F+ + K ND K +D+ L Sbjct: 274 NTPKNETVAIAEKLKVL---ISNQKFSSFNLSLTITQGLTEYNKNNDNALKMIKRADKAL 330 Query: 486 YVNK 489 Y K Sbjct: 331 YRGK 334 >UniRef50_Q2SP63 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q2SP63_HAHCH Length = 584 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 11/181 (6%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 LT ++LL++ + R+ + R+ +DA+TGL+NR+ + + QS + + Sbjct: 384 LTEMVLLSLA-LSSRV-NELQRKTYTDALTGLFNRRHFDDKFATEFHRAQQSKQPLTLLV 441 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 ID+D KQ NDT GH GD A+ +A+ + + +RK + R GG+EF +IL ++ A Sbjct: 442 IDIDCFKQFNDTYGHNVGDHALKEVARILAKGVRKPNCPCRYGGEEFAVILPNTDHDAAM 501 Query: 441 QLPERIEKRLQHIAPQKEIGF----SSGIYAMK--ENDTLHDAYKASDERLYVNKQNKNS 494 L R+ +++ + E G+ S G+ +M E D + ++ +D LY KQ + Sbjct: 502 SLANRLRVKVEE---ETESGYKLSISVGVASMAHDEFDCPNKLFERADYALYTAKQQGRN 558 Query: 495 R 495 R Sbjct: 559 R 559 >UniRef50_Q3Z0N3 Cellulose synthesis regulatory protein n=28 Tax=Enterobacteriaceae RepID=YEDQ_SHISS Length = 569 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 20/220 (9%) Query: 290 VHDLPGGIR-----VSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSREN 344 VH L G+R +S+++ +L+ + ++ +++ ++ MV + L ++ + Sbjct: 349 VHTLSEGVRGDFGSISIALTLLWALFTT-----MLLISWYVIRRMVSNMYVLQSSLQWQA 403 Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGS-SVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 D +T LYNR L E + L KL Q+ I +D+D K IND GHQ GD ++ Sbjct: 404 WHDTLTRLYNRGALF-EKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLS 462 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH----IAPQKEI 459 A I S+R D A R+GG+EFC+IL ++ AA++ ERI +L IA I Sbjct: 463 HAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTI 522 Query: 460 GFSSGIYAMKENDT----LHDAYKASDERLYVNKQNKNSR 495 S+ + +T +D RLY+ KQ +R Sbjct: 523 RISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNR 562 >UniRef50_B0VJW7 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJW7_9BACT Length = 578 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 9/169 (5%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 LY+ V +++D++TGL NR+ L L Q + + V F ID+D K +ND GH Sbjct: 395 LYEKVGELSLTDSLTGLRNRRYLEGNLFQMVILAARHNVPVCFSMIDIDFFKLVNDNYGH 454 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL----- 450 GD + LA+ + RKSD IR GGDEF +IL DS +++ + E + +++ Sbjct: 455 LAGDFVLKELARILNSEFRKSDVVIRYGGDEFLVILFDSDQRLSYSIMEDLRQKIEAYSF 514 Query: 451 ----QHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 Q I IG + + + L +D+ YV K N +R Sbjct: 515 DYNNQIITFTISIGIACDFHISSQPKNLAKCIACADQACYVAKTNGRNR 563 >UniRef50_B9K8R4 Diguanylate cyclase n=4 Tax=Thermotogaceae RepID=B9K8R4_THENN Length = 243 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 94/180 (52%), Gaps = 11/180 (6%) Query: 324 LILLNMVRMHF---RLYQNVSRENISDAMTGLYNR-----KILTPELEQRLQKLVQSGSS 375 +IL+ +V + F R+++ + I D +TGLY R + L E+E++ +K G Sbjct: 57 IILIGIVVVFFGTIRIFKKLKEIAIRDYLTGLYTRYYFFEEWLPQEMERQKRK---KGKG 113 Query: 376 VMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDST 435 + F+ ID+D K IND H+ GD + AQ I ++IR++D A+R GGDE + ++ Sbjct: 114 IAFLVIDLDDFKMINDRYSHRMGDKLLKFAAQKIVENIRRTDCAVRFGGDEILVAFPEAD 173 Query: 436 PQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + +R+EK+L + FS GI + + + + + +D ++Y K K + Sbjct: 174 EKTVENIVKRLEKKLMFNPFGLPLKFSYGIETWRPGENIENVVQKADLQMYSLKSLKKQK 233 >UniRef50_C9RRQ1 Diguanylate cyclase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRQ1_FIBSS Length = 443 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 5/161 (3%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 Y+ S+E D +TG NR L + +KL ++G V F+ D+D K++NDT GH Sbjct: 276 YEKSSKE---DPLTGCLNRAGFGGVLLREQEKLNRTGGPVSFMIFDIDHFKEVNDTYGHL 332 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--IA 454 GD + LA+ ++ IR +D +R GG+EF I+ D++ Q AA L E++ K ++ + Sbjct: 333 VGDEVLVNLAKLVQGMIRNTDSLVRWGGEEFVILSDDTSIQNAAFLAEKLRKAIESATLI 392 Query: 455 PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 Q+++ S G+ M + +D+ LY +K+N +R Sbjct: 393 TQQQVTCSFGVTEMIPGEDPKSFIARADKALYSSKENGRNR 433 >UniRef50_D0I9J2 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I9J2_VIBHO Length = 498 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 ++ + +++ DA+TG+YNR+ + E +++ + ++ + +D+D K +NDT GH+ Sbjct: 321 FKRLESDSMHDALTGVYNRRHIEERFEDEVKRAKRYARALSLLVVDLDNFKNLNDTEGHR 380 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL--QHIA 454 GD + + A+ ++ +RK D+ R GGDEF +I + A ++ ERI +R Q Sbjct: 381 AGDKGLVVAAEHLRSQLRKHDHIGRWGGDEFVVICPELDRADAIEIAERIRRRFEAQQFP 440 Query: 455 PQKEIGFSSGIYAMKEND---TLHDAYKASDERLYVNKQNKNSR 495 ++ S G+ ++ + T D ++ +D+ LY+ K+ +R Sbjct: 441 WCHKMTMSIGVASLSPDTSVMTPRDLFEEADQALYLAKERGRNR 484 >UniRef50_B1LCR1 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Thermotogaceae RepID=B1LCR1_THESQ Length = 643 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 5/152 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D++TG+YNR+ L + + + F+ ID+D K+IND+ GH GD + Sbjct: 486 DSLTGVYNREAFESRLAYLINLSKRYSRKLSFVFIDLDDFKRINDSKGHLVGDRVLKEFV 545 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK----EIGFS 462 + +RKSD RLGGDEF IIL ++ A L +RIE+ + P + FS Sbjct: 546 NRLTSLLRKSDVVGRLGGDEFGIILPETDRTGAEILMKRIEEHFRESVPVDGELFSVNFS 605 Query: 463 SGIYAMKEN-DTLHDAYKASDERLYVNKQNKN 493 GI E+ +++ + K +DER+Y+NK +K Sbjct: 606 YGISVFPEDGESVEELLKVADERMYMNKFSKK 637 >UniRef50_C1M322 Inner membrane protein yeaI n=1 Tax=Citrobacter sp. 30_2 RepID=C1M322_9ENTR Length = 473 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 17/184 (9%) Query: 320 ILTALILLNMVRMH-FRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 +++AL +++++ + F + + + I DAMT +YNRK+ L+ L K +V Sbjct: 288 VISALCIISILMYNTFIILKKETDSAIKDAMTKIYNRKLFYKSLKSSLAK-----GTVCV 342 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 + +D+DK K+INDT GHQEGD I + + +SIR +D R+GG+EF I+L + Sbjct: 343 MVLDIDKFKRINDTYGHQEGDRVIISIVDIVNKSIRDTDIFARVGGEEFAILLKCNDKDE 402 Query: 439 AAQLPERIEKRLQH--IAP-----QKEIGFSSGIYAMKENDTLHDAYKA-SDERLYVNKQ 490 A + ERI + +++ P ++++ S G+Y K +D D + +D LY + Sbjct: 403 AIVVAERIRRNVENGTTIPNSYNLKEKMTISIGVYCSKIDDESADKVVSYADAALY---E 459 Query: 491 NKNS 494 KNS Sbjct: 460 AKNS 463 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 2/157 (1%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 +L + + R +I+D +T YNR+ T LE+ +++ ++ I +D+D K +ND G Sbjct: 496 KLEEQLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIMLDIDHFKNVNDRFG 555 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--H 452 H GDL + LA IK IR++D R GG+EF I+L ++ + AA L E + ++L Sbjct: 556 HAAGDLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAAGLAEELREQLSMLE 615 Query: 453 IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNK 489 I + S G+ DTL +D+ LY K Sbjct: 616 IPGVGRVTASFGVTGYCPGDTLDTLLMRADQMLYTAK 652 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 2/161 (1%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 Y+ + + +D +TG +NR L +LE+ +++ + G+ + I D+D K INDT GH Sbjct: 178 YEKIKKLATTDPLTGAFNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHN 237 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 GD + + IK IRK+D R GG+EF II + A + E+I K ++ I + Sbjct: 238 IGDQVLKITIDTIKNHIRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKDIKVE 297 Query: 457 --KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 EI S G+ ++++ D K +D LY K+ +R Sbjct: 298 GIPEITISVGVAEYFPDESITDFIKKADIALYSAKKKGKNR 338 >UniRef50_B9K9D5 PleD-related protein n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K9D5_THENN Length = 647 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 5/153 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TG+YNR+ L + + + FI ID+D K IND+ GH GD + A Sbjct: 490 DPLTGVYNREAFESRLVYLMNLSKRYNRKLSFIFIDLDDFKHINDSKGHLVGDRVLKEFA 549 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE----IGFS 462 + + +RKSD RLGGDEF I+L ++ A + RIE R + E + FS Sbjct: 550 RTLSTLLRKSDIVGRLGGDEFGIVLPETDFNGAEAMIRRIEDRFREPVVVDEDRFLVKFS 609 Query: 463 SGIYAMKEN-DTLHDAYKASDERLYVNKQNKNS 494 GI ++ +++ + K +DER+Y+NK K Sbjct: 610 YGISVFPDDGESIEELMKVADERMYINKFRKKE 642 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 2/157 (1%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 R + + R++I+D +T +YNR+ LEQ ++++ ++ I D+D K +ND G Sbjct: 526 RFEELLYRQSITDPLTNIYNRRFFMQMLEQEIERVKRNKKLFSLIMFDLDHFKNVNDRFG 585 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GD+ + +A +K IRK+DY R GG+EF I+L +++ AA+L E + K++ Sbjct: 586 HAAGDMVLKSVADTVKGRIRKTDYFARWGGEEFIILLPETSLNNAAELAEELRKKISETE 645 Query: 455 PQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNK 489 ++ S G+ + DT+ D LY K Sbjct: 646 LDGIGKVTASFGVTEYRNTDTVDTVLLRVDGALYEAK 682 >UniRef50_A4BIU7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BIU7_9GAMM Length = 318 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 86/157 (54%), Gaps = 6/157 (3%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +T LYNR L ++ + + I D+D K++NDT GHQ GD I + Sbjct: 158 TDGLTQLYNRAYWEEMLSNEFKRQKRHAHDLSLIMFDIDHFKKVNDTYGHQVGDDVIRAV 217 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH---IAPQKE--IG 460 A+ ++ + R +D A R GG+EF ++L+DS + A ER+ K +++ P+ E + Sbjct: 218 AEEVRHNSRNTDIAGRYGGEEFALLLIDSDAENALLFAERLRKAIENRRVSTPEGELQVT 277 Query: 461 FSSGIYAMKENDTLHDAY-KASDERLYVNKQNKNSRS 496 S G+ KE+ ++A+ +A+D+ LY +K +RS Sbjct: 278 VSLGVAPWKESFHHYNAWIEAADKALYTSKDEGRNRS 314 >UniRef50_B7IG95 Ggdef domain protein n=1 Tax=Thermosipho africanus TCF52B RepID=B7IG95_THEAB Length = 483 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 22/172 (12%) Query: 316 VLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSS 375 V+F +LIL+ + +N+ D MT L+NR I+ + + G Sbjct: 322 VIFRTGISLILIKKFEEIVKEKENLKDLTFVDPMTQLFNRNII--------ENIPNKGKL 373 Query: 376 VMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDST 435 ++ ID+D K++NDTLGHQ GD + A +K++ R +DY IRLGGDEF I+ Sbjct: 374 IL---IDLDNFKELNDTLGHQFGDKILKEFADILKENTRSTDYVIRLGGDEFAIV----- 425 Query: 436 PQIAAQLPERIEKRLQHIAPQK-EIGFSSGIYAMKENDTLHDAYKASDERLY 486 + PE++ R+++I+ +K ++ FS GI N AY +D+RLY Sbjct: 426 --TDTENPEQLVNRIRNISIKKLQLDFSYGI---SNNFNFDKAYSVADKRLY 472 >UniRef50_C6HZ09 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZ09_9BACT Length = 1514 Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 34/291 (11%) Query: 181 WSFLQ-SGS-IGIDRKDIEKVF--TGRTVLSSI-YQDQRTKQNVMSLLTPVYVAGQLKGI 235 WS L SGS + R +I ++ GR++ ++ +DQ ++ +S L G Sbjct: 852 WSLLLLSGSDPNLQRSEIREIVEEAGRSLSRALDRRDQEVRERALSSLNRAITENARVGF 911 Query: 236 VLLD--------INKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGR--DIIINQSEDNLFQ 285 +L+D +N ++L + Y D PL + L D + R D + ++ + Sbjct: 912 ILVDMKDGELLYVNPHHLEELGYPPDYPLRGMPFRLFLADDEELRHVDEALKRARQEGRE 971 Query: 286 YVSYVHDLPGGIRVSLSIDILYFITSSW-----KSVLFWILTALILLNMVRMHFRLYQNV 340 +VS V+ +R L+ + W W + N RL + + Sbjct: 972 WVSLVNVR---LRRRDGAVFLFDLFGRWIDHEGSQRFLWTVVNATERN------RLQRRI 1022 Query: 341 SRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDL 400 E D++T L NR+ + LE + + ++G S++ ID+D K +ND GH+ GD Sbjct: 1023 EYEATHDSLTDLPNRRAMESYLEMAIARTRRNGGSLVTALIDLDDFKPVNDLYGHEAGDR 1082 Query: 401 AITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ 451 + ++ ++ +R+SD+ RLGGDEF I+L + A + PER+ K L+ Sbjct: 1083 LLREFSKRVRTLLRESDFFCRLGGDEFVIVL-----EFAGRDPERVHKELE 1128 >UniRef50_Q2LRV5 Sensory box/GGDEF family protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRV5_SYNAS Length = 294 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 14/163 (8%) Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 ++ D +TG+YNR+ EQ ++ ++ ++ ID+D LK+INDTLGH+ GD A+ Sbjct: 135 SLRDQLTGIYNRRGFINLAEQWIKTANRAKRQMLLSFIDVDDLKKINDTLGHEGGDKALV 194 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--------IAP 455 A ++Q+ R+SD R+GGDEF ++++D T PE + +RLQH ++ Sbjct: 195 ETANILRQTFRESDIVARIGGDEFAVLVLDMTDLN----PEILSRRLQHNIDEWNAKVSR 250 Query: 456 QKEIGFSSG--IYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 Q ++ S G +Y + +L+ SD+ +Y K+ K ++S Sbjct: 251 QYKLAMSWGMTLYDPESPISLNQLMSLSDKLMYARKKAKMNKS 293 >UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQN9_9GAMM Length = 529 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 7/152 (4%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +TGL NR ++ Q ++ + +S + D+D K+INDT GH GD + L+ Sbjct: 371 TDPLTGLPNRAAYDEQIAQEYERWSRYRTSFSVVVADLDFFKKINDTYGHLAGDKVLRLV 430 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ------HIAPQKEI 459 A+ I ++IR +D+ R GG+EF I+L + + AAQ +++ + L H P I Sbjct: 431 AKVITKNIRVTDFVARYGGEEFVILLPSTVAEEAAQAMDKLRESLASSPFNFHGKPVG-I 489 Query: 460 GFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 S G+ +KE D+L D + +DE LY K++ Sbjct: 490 TMSFGVTEIKEGDSLDDVFTRADEALYQAKED 521 >UniRef50_Q5SK54 GGDEF domain protein n=3 Tax=Thermus RepID=Q5SK54_THET8 Length = 316 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 6/151 (3%) Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITL 404 ++ +TGL NR+ L LE+ ++ + G + +D+D K++ND GH+EGD + Sbjct: 162 LTCPLTGLPNRRALEMALEREAARVERGGPPFALVLLDLDGFKRVNDEGGHREGDRYLRR 221 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSG 464 +A+A+ +R+ D R GGDEF ++L + + A ++ ER+ +RLQ +G + Sbjct: 222 VARALVSGVRRGDLVARWGGDEFAVLLPGTGEKEAVEVAERLGRRLQEEGVSASLGVA-- 279 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +YA L D + +D+ LY K R Sbjct: 280 VYA----GDLEDLFLRADQALYRAKALGKGR 306 >UniRef50_A1SVZ1 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SVZ1_PSYIN Length = 477 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 93/182 (51%), Gaps = 8/182 (4%) Query: 315 SVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGS 374 S+L IL A ++L V +++ +++++ DA+T L NR+ ELE L + S Sbjct: 291 SLLGTILIAFLILKTVNKYYKEMEHLAK---YDALTNLKNRRAFNEELEHSLLLCKRRAS 347 Query: 375 SVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDS 434 + D+D K +NDT GHQ GD + +A +K IR++D R GG+EF + +D+ Sbjct: 348 HLSLTFFDLDDFKSVNDTFGHQTGDKVLQYVADILKDDIRQTDIIGRWGGEEFIVAFIDT 407 Query: 435 TPQIAAQLPERIEKRLQHIA-----PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNK 489 + A + E+I ++ + ++ S G+ + DTL + +D+ LY K Sbjct: 408 ELEDAKFITEKIRAHIEKDSFLSQLKNMKVTASFGLTTITTQDTLDSLLERADQALYKAK 467 Query: 490 QN 491 +N Sbjct: 468 EN 469 >UniRef50_A3QI98 Diguanylate cyclase n=1 Tax=Shewanella loihica PV-4 RepID=A3QI98_SHELP Length = 401 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 9/189 (4%) Query: 317 LFWILTALIL-LNMVRMH---FRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQS 372 + W+ + L +N++ M RL Q + ++ D +TGL+NR+ + +LEQ Q+ ++ Sbjct: 197 MLWLYVVMTLWINVIMMGNALTRLVQKMRQQADRDYLTGLWNRRAMQQQLEQLHQRWLRD 256 Query: 373 GSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILV 432 G + I D+D KQIND GH GD + AQ I + R D RLGG+EF ++L Sbjct: 257 GQAYSLILFDLDFFKQINDKFGHSAGDAVLVKTAQQIGKVTRAMDIFCRLGGEEFLLVLP 316 Query: 433 DSTPQIAAQLPERIEKRLQHIAPQKE-----IGFSSGIYAMKENDTLHDAYKASDERLYV 487 + ++A + +++++ L+ + + I S GI DT +D+ +Y Sbjct: 317 GTDGEVAEIIAQKLQQALRQSSLNWQGSLIPISASFGIVTTATGDTPDSLLALADKAMYR 376 Query: 488 NKQNKNSRS 496 K+ R Sbjct: 377 AKETGRDRC 385 >UniRef50_A8F8N3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermotoga lettingae TMO RepID=A8F8N3_THELT Length = 466 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/105 (40%), Positives = 69/105 (65%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL NR++L E E+ L +SG +V I ID+ K+IND GH GD ++++A Sbjct: 308 DPLTGLPNRRMLEEEAERILSSSNRSGKTVSVIYIDLMGFKKINDQYGHSTGDKVLSVVA 367 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ 451 + +K+ +RKSD+ RLGGDEF +L + ++A +L ER+ ++++ Sbjct: 368 KRLKKCMRKSDFVARLGGDEFVFLLPGTPARLAVKLIERVIEQIE 412 >UniRef50_C5V083 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V083_9PROT Length = 635 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 3/112 (2%) Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITL 404 ++DA+TGL NR+ + LEQ ++G V + +D+D K INDT GHQ GD A+ L Sbjct: 476 VTDALTGLPNRRYMMERLEQEWALATRAGRPVCCMMVDIDHFKMINDTYGHQLGDEALKL 535 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 +A +++Q++RK D R+GG+EF +I DS + ER+ QH+A Q Sbjct: 536 VASSLQQAMRKQDVLCRVGGEEFMVICPDSDNKAGFIYAERLR---QHVAFQ 584 >UniRef50_Q1IVB0 Diguanylate cyclase with GAF sensor n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IVB0_ACIBL Length = 1125 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 89/163 (54%), Gaps = 3/163 (1%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 ++Q + +++I+DA+TG R+ L+ ++ +S + ID+DK KQ+NDT+GH Sbjct: 714 VFQKMQQQSITDALTGSKTRRYFLEALQSEWKRASRSTRPFSVVMIDLDKFKQVNDTMGH 773 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HI 453 EGDL + +A+ ++Q R+S+ R GGDEF I++ ++ A L ER+ + + Sbjct: 774 LEGDLVLARIARLLEQKCRQSNVVARFGGDEFVILMPETGVDQAQILAERLRLWIATDPM 833 Query: 454 APQKEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNSR 495 + +I S G+ ++ D + +D +YV+K ++ Sbjct: 834 LSEHQITGSFGVATYPIHGSSVEDIMRVADAGMYVSKHAGGNK 876 >UniRef50_B3PBW6 GGDEF domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PBW6_CELJU Length = 325 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 2/151 (1%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +T L NR+ L L+Q L ++ + I D+D KQIND GH GD + LA Sbjct: 170 DPLTELANRRALNQTLKQCLDDFQRNQTPATLIIFDLDYFKQINDKFGHSIGDEILQNLA 229 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPE--RIEKRLQHIAPQKEIGFSSG 464 Q I + IR +D A R GG+EF ++ ++ + A E R+ L+ AP+ EI S G Sbjct: 230 QLITRRIRTTDRAFRFGGEEFIVLARNTQLEEARLFAEQLRVNISLELNAPEGEITASFG 289 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +K N+TL + +D+ +Y KQ +R Sbjct: 290 CAELKPNETLDGWFNRADKAVYQAKQLGRNR 320 >UniRef50_A1U6N7 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U6N7_MARAV Length = 364 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 11/212 (5%) Query: 292 DLPG-GIRVSLSIDILYFITSSWKSVLFWILTA--LILLNMVRMHFRLYQNVSRENISDA 348 D+PG S I +F T +++S+ ++L A L N + + +++ +R +D Sbjct: 138 DMPGVSAEYSTDFKIRFFATLTFESIFCFVLEAGRLRARNKLVALAQAHEHAAR---TDE 194 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TGL NR+ + L + +SG + ID+D K+IND GH GD + A Sbjct: 195 LTGLANRRDMQGRLNTEFSRFERSGHHFSVVLIDLDLFKRINDDFGHDAGDEVLRQFADL 254 Query: 409 IKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK-----RLQHIAPQKEIGFSS 463 ++Q +R+SD A R GG+EF ++L D+T A L ER+ R H + S+ Sbjct: 255 VRQMVRQSDVAARWGGEEFLLLLPDTTLLQALTLAERLRAEVAATRFHHREQTLPVTISA 314 Query: 464 GIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 G+ ++ ++ ++++ K +D +LY K++ +R Sbjct: 315 GVCSISKSGSINELLKQADVQLYNAKESGRNR 346 >UniRef50_A0LW67 Diguanylate cyclase/phosphodiesterase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LW67_ACIC1 Length = 884 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 11/168 (6%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 L Q +++ D +TGL NR + + L Q L K G + + ID+D K +NDTLGH Sbjct: 432 LEQKLTQLAFHDPLTGLANRALFSERLSQVLAKAKAEGRTCAVLFIDLDDFKTVNDTLGH 491 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL--QHI 453 GD + +A+ I +R SD RLGGDEF +I+ D+ ++ Q ERI R+ Q Sbjct: 492 DAGDELLCAVAERITGCLRPSDQPARLGGDEFAVIIEDA---LSTQAAERIAARITEQLR 548 Query: 454 AP------QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 AP + I S GI + T + + +D +Y+ K + R Sbjct: 549 APISVHGCELHIRASIGIATSQGVQTADELLRNADLAMYMAKADGKGR 596 >UniRef50_Q7P0N5 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0N5_CHRVO Length = 400 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 24/264 (9%) Query: 247 NIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDIL 306 N F DR ++ + + D +++ + Q +++ + VS+++D++ Sbjct: 129 NAFMERDRDIIAMYRSGDAAQRDKASKLVMGEE----IQIFTHISQNTNALAVSITLDLM 184 Query: 307 --------YFITSSWKSVLFWILTALILLNMVRMHFR-------LYQNVSRENISDAMTG 351 Y I + W ++ WI+ + + + +VR+ + L Q + +D +T Sbjct: 185 KKVAQSNSYGIVARWIMLVMWIIASAMAILLVRLLHKWLGQMRSLMQKLEALAGTDELTQ 244 Query: 352 LYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQ 411 L NR+ ++E L + + D+D KQ ND+ GH EGD + +A IK Sbjct: 245 LPNRRTWDIQIEMMLATARRYRQPIAVALFDLDHFKQFNDSYGHPEGDRLLREVAVLIKS 304 Query: 412 SIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKEN 471 +R+SD R GG+EF + L+D AA RIE ++ Q+ FS G+ E Sbjct: 305 RMRQSDLFARFGGEEFVLALMDCNLDQAA---ARIESLRGNLPDQQT--FSVGVTVWLEG 359 Query: 472 DTLHDAYKASDERLYVNKQNKNSR 495 + +H +D+ LY+ K R Sbjct: 360 ERIHSTLARADKALYLAKNGGRDR 383 >UniRef50_B1JAK9 Diguanylate cyclase with GAF sensor n=1 Tax=Pseudomonas putida W619 RepID=B1JAK9_PSEPW Length = 313 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 10/189 (5%) Query: 314 KSVLFWILTALILLNMVRMHFRLYQNVSR------ENISDAMTGLYNRKILTPELEQRLQ 367 + V + L + +L +++M R R + + D+MTGL+NR + + Sbjct: 126 EQVQLFELISRLLNALLQMEIRAENQTRRAERFAAQALQDSMTGLFNRAGWDQLMAKEEH 185 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 + + G S + I ID+D+LKQIND GH GD I A+A+ ++ R D RLGGDEF Sbjct: 186 RCRRHGKSCVVIVIDLDELKQINDREGHLAGDSLIRRTAEALSEAARSEDVVARLGGDEF 245 Query: 428 CIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYV 487 II V+ L ER+ RL ++ I S G+ + ++ A+ +D R+Y Sbjct: 246 GIIGVNCDLVHGQVLLERVLDRL----AERGIAASVGMSSRPAKGGINGAFIEADLRMYE 301 Query: 488 NKQNKNSRS 496 K+ K+S++ Sbjct: 302 QKRLKSSKN 310 >UniRef50_B5Y6T7 Ggdef domain protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6T7_COPPD Length = 1053 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 82/153 (53%), Gaps = 2/153 (1%) Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 + D++TGL+NR L + + ++ G + +D+D KQ+ND+ GH+ GD + Sbjct: 896 GMQDSLTGLFNRTYGNQRLTEEWELYLRGGPQFSILFLDLDGFKQVNDSFGHEMGDKVLM 955 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGF 461 ++ ++ S+R +D AIR GGDEF +IL D+ + AA + R+ ++ K + Sbjct: 956 EFSKLLRSSLRATDVAIRWGGDEFLVILPDTDEEEAATISRRLSNQISSCITSLGKPVTA 1015 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 S G ++ E +++ +D+R Y+ K K + Sbjct: 1016 SIGASSVSEVNSVEQLVDLADQRTYLAKTRKKN 1048 >UniRef50_Q07Y51 Diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q07Y51_SHEFN Length = 359 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 5/148 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL NR +L + + L + SV + +D+D K+IND GH GD + ++ Sbjct: 182 DPLTGLNNRLLLDSIFDMLCESLPEQHQSVSVLILDLDHFKRINDQYGHDVGDKVLVEVS 241 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI----APQKEIGFS 462 + I R++D+A RLGG+EFC+++ DS Q A Q+ ER+ K ++ + + + S Sbjct: 242 RIINSVRRQNDWAFRLGGEEFCMLIPDSNLQQAGQIAERLRKAVELVTVIDGSELNLSIS 301 Query: 463 SGIYAMKENDT-LHDAYKASDERLYVNK 489 G+ E+ YK +D RLY K Sbjct: 302 IGVSRWPEDGAHFSQIYKTADARLYQAK 329 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 10/179 (5%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 +LT +L +++ F+ + D +TG+YN+ L+ L + + G + I Sbjct: 324 LLTMSFILGVIKERFKAMAEI------DTLTGIYNKGKFNHLLQVELDRSKRYGRPLSLI 377 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 D+D K+IND GHQ GD + LA+ + +IR +D+ R GG+EF I+ ++ + A Sbjct: 378 IFDIDHFKKINDAFGHQAGDYVLKTLAKIVSSNIRSTDFFARWGGEEFVILAPETDLEGA 437 Query: 440 AQLPERIEKRLQHIAPQKEIG---FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 L E+I K ++ P + +G S G+ ENDT+ K +D LY K +R Sbjct: 438 QILAEKIRKAIEEY-PFETVGKVTSSFGVTEAFENDTVDSFVKRADVALYKAKDKGRNR 495 >UniRef50_A0QK38 Diguanylate cyclase n=2 Tax=Mycobacterium avium RepID=A0QK38_MYCA1 Length = 315 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 14/148 (9%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +DA+T L +R L P L S + ID+D K+ NDT GH GD + Sbjct: 178 TDALTQLLDRSTLGPRLSAH-------ASESAVVVIDLDNFKRYNDTHGHSAGDELLVAF 230 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGI 465 A A++ S+ D R+GGDEF I+LVD+ + A ++ +R+ R + + +GFS+GI Sbjct: 231 ADALRWSVGADDAVFRIGGDEFLIMLVDADREQAERVLDRLRGRWAELG--EPVGFSAGI 288 Query: 466 YAMKENDTLHDAYKASDERLYVNKQNKN 493 A + D + +DE +Y NK++++ Sbjct: 289 AAGAQ-----DLMRLADEHMYANKRSRD 311 >UniRef50_Q30W44 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30W44_DESDG Length = 476 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 11/181 (6%) Query: 314 KSVLFWILTALILLNMVRMHFRLYQ-NVSRENISDAMTGLYNRKILTPELEQRLQ----K 368 +++ ++ L++L + + YQ + +D +TG NR+ ELE+R + Sbjct: 289 RTLAMGFVSTLVILALCVLAVNKYQARIEHLARTDPLTGAANRR----ELEERFDLAAYR 344 Query: 369 LVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFC 428 + G + ID+D K++ND LGH GD + +A+ I+ +R +D R GGDEF Sbjct: 345 ASRDGIPFSILIIDLDGFKEVNDRLGHLAGDEVLASMARVIRGRLRPTDLLARWGGDEF- 403 Query: 429 IILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVN 488 IIL+D + A L RI + AP +GFSSG+ A +++D L + +D +Y Sbjct: 404 IILLDGNEESARALARRISAAV-CAAPDIPVGFSSGVAAYRDSDDLTSLTRRADNAMYQA 462 Query: 489 K 489 K Sbjct: 463 K 463 >UniRef50_A8F806 Diguanylate cyclase n=1 Tax=Thermotoga lettingae TMO RepID=A8F806_THELT Length = 538 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 17/168 (10%) Query: 335 RLYQNVSRENISDAMTGLYNR----KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIN 390 +L + + + ++D +TG+YNR KIL+ L+ K + D+D LK IN Sbjct: 376 KLQKRLEKLALTDELTGVYNRYAALKILSAYLKTNRFK-------ITICYFDIDHLKLIN 428 Query: 391 DTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 D++GH GD + + + +K+ +RKSD R+GGDEF I+ +S+ + + ER+ L Sbjct: 429 DSIGHSAGDNLLKFVVEVVKRCVRKSDKIARIGGDEFLIVFPNSSEKEVKFIMERVNSSL 488 Query: 451 QHIAPQK----EIGFSSGIYAMKENDTL--HDAYKASDERLYVNKQNK 492 + P + E+ S G+ ++ N +L D K +D+++Y NK++K Sbjct: 489 NNEKPDEFKSFEVSISYGLIELEPNSSLDIDDILKIADKKMYQNKRSK 536 >UniRef50_C1DXV0 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DXV0_SULAA Length = 437 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 7/178 (3%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 L L +LN + + NVS+ + D++TG +NR +L L + + + G + + Sbjct: 254 LKLLFILNRISL-----DNVSKIALKDSLTGFFNRHMLDVLLSKETSRSKRHGYKISILM 308 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 +D+D K IND GH GD + ++ +K ++R+SDY R GG+EF I+L + + A Sbjct: 309 MDLDNFKNINDIYGHLVGDEVLMHFSRIVKNNLRESDYPFRYGGEEFLILLPHTDEEGAL 368 Query: 441 QLPERIEKRLQ-HIAPQKE-IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + ERI K ++ + P E I S G+ +K D + + +D LY+ K+ +R Sbjct: 369 VVAERIRKSVESYKFPVIERITVSCGVREIKNLDNPYIDIEEADRYLYIAKKTGKNRC 426 >UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales RepID=B4RZE8_ALTMD Length = 325 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/123 (37%), Positives = 70/123 (56%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 L Q + + D +TGL+NR+ ++ + V+ + +D+D K+INDT GH Sbjct: 151 LNQELKTASRVDGLTGLFNRRYWQERFDEMYKLCVRRDKPSTAVMLDIDHFKRINDTYGH 210 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP 455 Q GD I +LA IK+ +R++D A R GG+EF IIL DST + A + ERI + Q + Sbjct: 211 QAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSTVEDARIVAERIRQLAQRLVV 270 Query: 456 QKE 458 + E Sbjct: 271 EHE 273 >UniRef50_C9RCA9 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9RCA9_AMMDK Length = 706 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 12/158 (7%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 V D +TGL+ R +L LV G + +D+D K++NDT GH E Sbjct: 359 PGVGPAGARDPLTGLHTRDLLA--------SLV-PGEVCSVVFVDLDGFKRVNDTYGHDE 409 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK 457 GD + L + +++ +R+ D A+R GGDEF ++L D+ P A ++ E + + + + P Sbjct: 410 GDRVLALFGECLRRRLRERDLAVRWGGDEFVLVLPDTHPGAAERVVEDLRREWERVRPYP 469 Query: 458 EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +GFS+G A++ +L +A + +D R+Y K + +R Sbjct: 470 -VGFSAGTAAVR--GSLEEAVREADRRMYAEKAARKAR 504 >UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SFB8_9CAUL Length = 726 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/156 (35%), Positives = 83/156 (53%), Gaps = 5/156 (3%) Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITL 404 + D +TGL NR + T L Q ++L + G SV + + +D+ K +NDTLGH GD I Sbjct: 291 LHDGLTGLPNRTLFTDRLNQATERLRRHGGSVAVMCVGLDRFKDVNDTLGHSAGDELIRH 350 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ-HIAPQKEIGFSS 463 AQ I IR D RLGGD F II D+ AA L +R+ + L+ + + +SS Sbjct: 351 SAQKIGSMIRAGDTLARLGGDVFVIIQTDTDAHSAAALAKRVLEGLKGQVTLESGPVYSS 410 Query: 464 ---GIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 G+ ++E+D +A + +D LY K+ S+ Sbjct: 411 CSIGVTLLQESDIEAAEALRQADLALYRAKEQGRSQ 446 >UniRef50_B8KUK1 Diguanylate cyclase n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KUK1_9GAMM Length = 378 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 7/174 (4%) Query: 319 WILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 W+L+ L ++R+ + ++ ++D +TG NR+ L P+ E+ + + Sbjct: 181 WVLS----LGLMRLIAQQTDELADLALTDPLTGALNRRYLKPQTERNIADYRRYSRLSTL 236 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 + ID+D K INDTLGH EGD A+ L +++ IR D RLGG+EF I+L ++ Sbjct: 237 VMIDIDHFKAINDTLGHSEGDRALQNLVTLVEKRIRGVDMLYRLGGEEFVIMLAETGTSS 296 Query: 439 AAQLPERIEKRLQHIA---PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNK 489 A ++ E + R+ ++ P K S G+ + + D + DE LY K Sbjct: 297 ATRVAEELRVRISEMSSDEPSKRFTVSMGVCDVTVATSAEDWLRQLDEALYRAK 350 >UniRef50_Q4KIW6 Response regulator/GGDEF domain protein n=22 Tax=Pseudomonas RepID=Q4KIW6_PSEF5 Length = 555 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 7/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 L+ VR +N+ + D++TGLYN + LE + + G + F +D+D Sbjct: 358 LITTVRNRAARARNLKARMVRDSLTGLYNHTHILQLLEDCSFRARREGKPLSFAMLDIDH 417 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K++ND+ GH GD I LA +KQ +RK+D+ R GG+EF I++ D+ A ++ + Sbjct: 418 FKRVNDSHGHPMGDRVIKSLALFLKQRLRKTDFIGRYGGEEFAIVMPDTDQDAACKVLDE 477 Query: 446 IEKRLQHI----APQK-EIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 I +R I PQ FS+G+ M+E+ D+L A +A DE LY K +R Sbjct: 478 IRQRFAEIHYPAQPQDLWCTFSAGVVEMQEDSDSLIMASQA-DEALYRAKHGGRNR 532 >UniRef50_B0TNJ9 Diguanylate cyclase n=4 Tax=Shewanella RepID=B0TNJ9_SHEHH Length = 300 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 9/158 (5%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 Y+ +S + + DA+T L NR L + L + ++ S I +D+D KQ+ND GHQ Sbjct: 126 YKEMSLQAMYDALTNLGNRHYYQESLRKELARAERNNESFSLITLDLDNFKQLNDDFGHQ 185 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 GD A+ A+ + +IR SD A R+GGDEF ILV + + A L +RI L IA Sbjct: 186 LGDSALVEFAKMLNTTIRNSDQAFRIGGDEF-TILVQANVEAAGILCQRI---LDAIAIH 241 Query: 457 K-----EIGFSSGIYAMKENDTLHDAYKASDERLYVNK 489 + ++ S G+ + NDT Y+ +D LY K Sbjct: 242 QYLEKYQVKTSMGVAQWRHNDTEESLYQRADNALYEAK 279 >UniRef50_A3DDM3 Diguanylate cyclase n=3 Tax=Clostridium thermocellum RepID=A3DDM3_CLOTH Length = 1826 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 84/154 (54%), Gaps = 4/154 (2%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +TG Y RK +E +L+K + S + I ID+DK K IND GHQ+GD ++ + Sbjct: 1487 TDKLTGTYTRKFFENAIETQLKKASREKSQMSIIMIDIDKFKSINDNYGHQKGDEILSKV 1546 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH---IAPQKEIGFS 462 + ++IR +D R GG+EF IIL D+ P A L ER+ ++ + + S Sbjct: 1547 GNILLKNIRPTDICCRYGGEEFVIILPDTGPSEAEALAERLRSTVEKARLMGQGNSLTIS 1606 Query: 463 SGIYAMKENDTL-HDAYKASDERLYVNKQNKNSR 495 GI ++ ++ ++ + +D+ LY K++ +R Sbjct: 1607 LGISCYPKHGSIRNELIEKADQALYHAKESGRNR 1640 >UniRef50_B9LE84 Diguanylate cyclase n=2 Tax=Chloroflexus RepID=B9LE84_CHLSY Length = 301 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 71/134 (52%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 RLY V ++D++TG+ NR+ LE+ + G + I +D+D K NDT G Sbjct: 121 RLYAEVEALAVTDSLTGIANRRAFDRALEREFVRARHYGYPLALIMVDIDSFKHYNDTYG 180 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GD + +AQ + QS+R+ D+ R GG+EF IIL ++ Q A + E+I ++ + Sbjct: 181 HLAGDDRLRAVAQLLAQSVREVDFVARYGGEEFAIILTNTDKQTAIAVAEQIRRKAEMSC 240 Query: 455 PQKEIGFSSGIYAM 468 P+ G Y + Sbjct: 241 PEPLNGLPVSGYTL 254 >UniRef50_C6PSR9 Diguanylate cyclase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSR9_9CLOT Length = 521 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 90/164 (54%), Gaps = 3/164 (1%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 RL + + ++I D +TG+YN+K +T L++ ++K ++S + ID+D K+IND G Sbjct: 354 RLNEELYSDSIKDGLTGVYNKKYITTLLQEEIKKTLKSSIPLTIAMIDIDHFKKINDNYG 413 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GD + LA + + ++ R GG+EF I++ D+ + +L E+I ++ + Sbjct: 414 HLTGDKVLKKLADLVTTELGLNEKFGRFGGEEFLILMFDTQLKDGYELCEKIRSKVSNYK 473 Query: 455 PQKE---IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + E I S GI +K +D++ K +D+ LY K N ++ Sbjct: 474 FEYECSHITISIGIAELKCDDSISSLIKRADDCLYKAKFNGRNK 517 >UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UW14_9AQUI Length = 218 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 83/152 (54%), Gaps = 2/152 (1%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +TGL NR+ + L+ + ++G+ + ID+D K INDT GH GD + L Sbjct: 63 TDPLTGLPNRREIMNFLDFEFNRAKRNGTPLSVAVIDLDDFKFINDTYGHVAGDEVLKSL 122 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIAPQKEIGFSS 463 A I++++R +D R GG+EF +++ D+ A ++ ER+ + ++ + P + S Sbjct: 123 ASLIRRNLRSTDMVGRFGGEEFVVVMPDTPLNTAVKVMERLRRVVEETYFEPIGSVSISV 182 Query: 464 GIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 G+ ++E D + + +D +LY K+ +R Sbjct: 183 GVAQLREGDDVSNLLSRADGKLYQAKREGKNR 214 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 6/151 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGLYNR+ ++ + V+ + +D+D K+INDT GHQ GD I +LA Sbjct: 165 DGLTGLYNRRYWQERFDEMHKLCVRREKPSTALMLDIDHFKRINDTYGHQAGDKVIKMLA 224 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE---IGFSS 463 IK+ +R++D A R GG+EF IIL DS+ + A + ERI + Q + + E I F+ Sbjct: 225 ALIKRCVRETDLAGRYGGEEFAIILNDSSVEDAKIVAERIRQLAQRLVVEHEGESISFTV 284 Query: 464 GIYAMKENDTLHDAY---KASDERLYVNKQN 491 + + + A + +D+ LY K+N Sbjct: 285 SLGLAQFSPDFKGAMAWLECADQALYEAKEN 315 >UniRef50_B4S1M7 GGDEF domain protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S1M7_ALTMD Length = 949 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 5/158 (3%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + ++R + D++TGL NR+ T + Q+ + G + + +D+D K+IND GHQ Sbjct: 784 EKLTRLSTQDSLTGLKNRRYFTQRAKAEWQEFQRHGHTFSLLLLDIDYFKRINDEYGHQT 843 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI---A 454 GD + +A+ ++ S+R+SD R GG+EF I+L Q A + E++ K + + + Sbjct: 844 GDSVLVKIAKILQSSLRESDVIARWGGEEFLILLPSLKEQEAYWVAEKLRKAVASLVIDS 903 Query: 455 P--QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQ 490 P Q + + G+ +K D++ A D++LY K+ Sbjct: 904 PPYQLNVTITCGVADIKNYDSIEACIHAVDKKLYKGKE 941 >UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEB9_9SPHN Length = 600 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 77/150 (51%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +TG+ NR+ L+Q + QSG SV D+D K+IND+ GH GD I + Sbjct: 446 TDQLTGIANRRRTEFVLDQAIGAAEQSGKSVSIAIFDIDHFKRINDSYGHHTGDEVIKRV 505 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGI 465 AQ +R D R GG+EF I+L D+T + A ++ ERI + ++ + S G+ Sbjct: 506 AQDAAAQLRSGDLVGRYGGEEFVIVLPDATQETALRVGERIRETIEAANSGPPVTISIGV 565 Query: 466 YAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + +T + +D LY K+ +R Sbjct: 566 AELAQGETADALLRRADRALYSAKRAGRNR 595 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 4/159 (2%) Query: 340 VSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGD 399 ++R+ +D +TGL+NR L Q L ++ ++G + + D+D K++ND GH GD Sbjct: 561 LARQATTDPLTGLHNRLRFNEGLAQELARVRRTGQPLSLVMFDVDHFKEVNDRYGHPTGD 620 Query: 400 LAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEI 459 + L+Q +R++D R GG+EF I+LVD+ A ++ E + +RL P +I Sbjct: 621 QVLIRLSQTAAAQLRQTDLLARWGGEEFAILLVDADLHAAVEVAENL-RRLVARTPFDQI 679 Query: 460 G---FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 G S G+ + +++ + +D LY K N +R Sbjct: 680 GSVTASFGVAECRPDESADSLLERADAALYRAKSNGRNR 718 >UniRef50_Q747B1 GGDEF domain/HAMP domain protein n=1 Tax=Geobacter sulfurreducens RepID=Q747B1_GEOSL Length = 533 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 6/151 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D++TGLYNR E+ QR+ + V + +D+D LK +NDT GH GD I A Sbjct: 368 DSLTGLYNRLFFEAEM-QRIDR--GRHFPVSMVMVDVDNLKTVNDTFGHTAGDALIIKAA 424 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR---LQHIAPQKEIGFSS 463 QA++ + R D R+GGDEF +I+ S + A + ER+ + L E+ S Sbjct: 425 QALRAAFRSEDVVARVGGDEFAVIMEGSDHETALEALERVRETVALLNSDGDSPELALSL 484 Query: 464 GIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 G TL +++ +D+R+Y +K + + Sbjct: 485 GTATATAPLTLGQSWRLADQRMYADKARRKA 515 >UniRef50_A1HS81 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS81_9FIRM Length = 553 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 84/157 (53%), Gaps = 2/157 (1%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 ++ + + + +++D++T +YNR+ +LE+ +++ ++GS + +D+D+ K IND G Sbjct: 383 KMEEELRQLSVTDSLTNVYNRRYFVQKLEEEIERAKRAGSKFSLVMLDIDRFKSINDRFG 442 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH-- 452 H GDL + +A+ IK IRK D R GG+EF ++L ++T A L E + + L Sbjct: 443 HNAGDLVLKSMAEMIKNRIRKIDTLARWGGEEFVMLLPETTVNKAVVLVEELRESLSQMD 502 Query: 453 IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNK 489 I + S G+ DT+ + D +Y K Sbjct: 503 IPGVGRVTASFGVVGYCPGDTIDTLMQRVDALMYEAK 539 >UniRef50_C9LV04 Putative sensory box-containing diguanylate cyclase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LV04_9FIRM Length = 589 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 4/151 (2%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 DA+TGL NR+ + + L + S + +DMD K INDT GH GD A+ LA Sbjct: 432 DALTGLMNRRAMERSFKDILHDALASDIPFAVMMLDMDDFKGINDTFGHAMGDEALVALA 491 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK---RLQHIAPQK-EIGFS 462 ++ S+R D R GGDEF +IL + A ++ ERI + L + P K +G S Sbjct: 492 DILRSSVRSVDIVSRWGGDEFFVILTHADRAAAERVVERIHRGASSLSLLMPDKRSVGLS 551 Query: 463 SGIYAMKENDTLHDAYKASDERLYVNKQNKN 493 G+ +DT ++ +D LY +K+ Sbjct: 552 IGVTLSSAHDTPETVFQRADAALYESKRTAG 582 >UniRef50_A4BSX0 Putative diguanylate cyclase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSX0_9GAMM Length = 386 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 9/203 (4%) Query: 296 GIRVSLSIDILYFITSSWKSVLFW-ILTALILLNMVRMHFRLYQ---NVSRENISDAMTG 351 G V+LS++ IT ++F + +ILL + R+ + N+ + D++TG Sbjct: 157 GAMVALSVNGAGGITQITPGLVFLNLFGGIILLYTYVLMSRIERSRFNLEERSRLDSLTG 216 Query: 352 LYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQ 411 L NR+ L + L+ L++ G V + DMD KQIND GH GDL + A+ +++ Sbjct: 217 LVNRRALEEAADALLKSLLEHGGEVAVMLADMDDFKQINDRHGHAVGDLVLRRFARILQR 276 Query: 412 SIRKSDYAIRLGGDEFCIILVD----STPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYA 467 SIR D A R GGDEF +IL+D T ++A ++ E + + A + F A Sbjct: 277 SIRSHDIAARYGGDEFVLILLDIDLAGTERVAQRIQESVAAWARENALCCTVTFGLAA-A 335 Query: 468 MKENDTLHDAYKASDERLYVNKQ 490 + +L KA DE LY K+ Sbjct: 336 PRHGTSLPVLLKAIDEALYRGKR 358 >UniRef50_A0L7G7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7G7_MAGSM Length = 476 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 5/168 (2%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 + H R + ++ +D +TG+ NR L L +Q+ + G + I D+D KQ+ Sbjct: 277 IESHMRKLEEIA---FTDGLTGVANRASLQQILNAEMQRSRRHGGTFSIILFDIDHFKQV 333 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 ND GHQ GD + LLA I ++R +D R GG+EF ++ + + A +L E++ + Sbjct: 334 NDNFGHQVGDDVLRLLASTIADNLRATDTIARWGGEEFMVVCPEINIEAAHRLAEKLRQL 393 Query: 450 LQHIA-PQ-KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ++HI P+ K+I S G+ ++ND + +D LY K+ +R Sbjct: 394 IEHITFPEVKQITSSFGVTQFQKNDQSRSLTQRADCALYRAKEGGRNR 441 >UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SY9_SULDN Length = 611 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 2/151 (1%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TG YNR+++ +++ + V+ ++ I D+D K +NDT GHQ GD ++ + Sbjct: 457 DKLTGAYNRRMIDEFMKKEIFLHVRDSKNLSLIMADIDHFKLVNDTYGHQAGDAVLSDVG 516 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIAPQKEIGFSSG 464 + I +IRKSD R GG+EF +I +++ Q A L ++I + ++ H A S G Sbjct: 517 RIISSTIRKSDIFGRYGGEEFIVICPNTSSQQALILAQKIREEIENFHFAEVGHKTISLG 576 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + ND + + K +D+ LY+ K+ +R Sbjct: 577 VATLIANDEVENIIKRADDALYIAKKEGRNR 607 >UniRef50_Q2YBC6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YBC6_NITMU Length = 569 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 6/153 (3%) Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 +I+D++TGLYNR L L +L + ++ + +D+D K +NDT GH GD + Sbjct: 407 SITDSLTGLYNRNKLDAILADQLARFRRTQRPFALLMLDIDHFKTLNDTYGHITGDKILA 466 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE---KRLQHIAPQKEIG 460 +AQ + QSIR DYA R GGDEF IILV++ A + ERI ++L + A + I Sbjct: 467 KVAQILLQSIRSIDYAARYGGDEFIIILVETYIDQAVKTAERIRTHVEKLTYPAGKSTIS 526 Query: 461 FSSGIYAMK---ENDTLHDAYKASDERLYVNKQ 490 + I A++ ++ T + +D LY K+ Sbjct: 527 ITVSIGAVECRSDDSTTTAVFSRADNALYEAKR 559 >UniRef50_A6FCH2 GGDEF domain protein n=1 Tax=Moritella sp. PE36 RepID=A6FCH2_9GAMM Length = 291 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 2/168 (1%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 LL MH + Q + + D +TGL NR +++ + S++ + D++ Sbjct: 122 LLETNLMHALMLQEMQVRIMKDHLTGLDNRASFDENIKRSYSLCQRHKSNMALLVTDLND 181 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K++NDT GH GD + A +++SIR SD A RLGGDEF IIL ++ Q + ER Sbjct: 182 FKRVNDTYGHPFGDKILKHYAHVLQRSIRNSDVAFRLGGDEFAIILQPASVQSTRLVIER 241 Query: 446 IEKRLQHIAPQKEIGFSSGIYAM--KENDTLHDAYKASDERLYVNKQN 491 I+ +++ E +S I + + +T+ +K +DE LY NK N Sbjct: 242 IDSEIKNDVLLSEFNITSAIGSATWRAGETIESLFKLADEDLYNNKFN 289 >UniRef50_C6XL77 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alphaproteobacteria RepID=C6XL77_HIRBI Length = 459 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 10/160 (6%) Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITL 404 ++D +TGL+NR+ + +LEQ +++ G V + D+D K++ND GH GD + Sbjct: 293 VTDQLTGLHNRRYMENQLEQFMKRANMGGGPVSILLCDLDHFKKVNDGHGHDVGDEVLRQ 352 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP--------Q 456 + + +IR SD A R GG+EF +I+ D+T Q+A ERI +++ AP + Sbjct: 353 FSDRLMHNIRPSDIACRYGGEEFMVIMPDTTIQMAQLTAERIREKVDG-APFSINNGLGR 411 Query: 457 KEIGFSSGI-YAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ++ S G +D++ K +DE LY K+N +R Sbjct: 412 LDVTMSGGASVTFPPDDSVAQLIKRADEALYNAKENGRNR 451 >UniRef50_Q7P1K5 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1K5_CHRVO Length = 180 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 6/156 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL NR + L+ + +L +SG + + +D+D+ K +NDT GH GD + L+A Sbjct: 21 DRLTGLANRNLFYDRLQHAITRLDRSGKRLGLLFLDLDRFKPVNDTYGHVVGDRVLQLIA 80 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVD-----STPQIAAQLPERIEKRLQHIAPQKEIGF 461 I+ IR D R+GGDEF I++ D ++AA+L + I+ Q + +G Sbjct: 81 ARIRDVIRNEDTVARIGGDEFVILMEDIESNREADKVAARLKQAIQMPYQVDQHRVLVGV 140 Query: 462 SSGIYAMKENDTLHDAYKA-SDERLYVNKQNKNSRS 496 S GI E+ L D A +D ++Y NKQ+ + S Sbjct: 141 SIGIAYYPEDGLLIDELLAVADRKMYGNKQSPSRHS 176 >UniRef50_C9QKN1 GGDEF family protein n=2 Tax=Vibrio RepID=C9QKN1_VIBOR Length = 260 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 21/161 (13%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 +L + ++ E D +TGLYNRK L+ + I +D+D LK++ND+ G Sbjct: 118 KLIKQINEEACIDELTGLYNRKKLSSIRMKHFD----------LIYLDLDGLKKVNDSKG 167 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GDL I AQAI Q I + + A R+GGDEF I++ P QL +R+E+ LQ A Sbjct: 168 HAVGDLMIIRFAQAINQVIGRHEQAFRVGGDEFVIVV---KPNEGQQLIDRLEQELQGEA 224 Query: 455 PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 I FS GI A N+ L A + +D+ +Y + KNS+ Sbjct: 225 ----IKFSYGIEATSINE-LTQALEKTDQAMY---EMKNSQ 257 >UniRef50_Q1Z5A2 Putative uncharacterized protein n=3 Tax=Photobacterium profundum RepID=Q1Z5A2_PHOPR Length = 395 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 17/188 (9%) Query: 317 LFWILTALILL------NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLV 370 ++W+ + L L+ + + M RLY R+ I D +TG+YNR++L ++ + + Sbjct: 183 IYWLQSVLALMVIWSQVSKLHMLMRLY----RQAILDPLTGIYNRRMLLQLGKKNMLECE 238 Query: 371 QSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCII 430 G + D+DK K+INDT GH GD +T ++ IRK+D R GG+EF + Sbjct: 239 LKGEPFSVLLFDIDKFKRINDTWGHSVGDKVLTGFTSFVQSKIRKTDLFGRYGGEEFVLF 298 Query: 431 LVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSS-------GIYAMKENDTLHDAYKASDE 483 L D P A ++ R+ ++ + I S GI ENDTL + +D Sbjct: 299 LPDCPPDTAIKISNRMLIAIRDLKLPINIDNQSLSITTCIGISTYSENDTLASMLERADL 358 Query: 484 RLYVNKQN 491 LY K + Sbjct: 359 ALYKCKHS 366 >UniRef50_B1LB97 Diguanylate cyclase n=2 Tax=Thermotoga RepID=B1LB97_THESQ Length = 240 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 11/180 (6%) Query: 324 LILLNMVRMHF---RLYQNVSRENISDAMTGLYNR-----KILTPELEQRLQKLVQSGSS 375 +IL+ +V F ++++ + I D +TGLY R + L E+E++ +K +G Sbjct: 54 IILVGIVVTFFGVTKIFKRLKEIAIKDYLTGLYTRYYFFEEWLPMEMERQKRK---NGKG 110 Query: 376 VMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDST 435 + F+ ID+D K IND H+ GD + +A I ++IRK+D A+R GGDE I D+ Sbjct: 111 ISFLIIDLDDFKTINDKYSHRMGDKLLKYVASEIIKNIRKTDCAVRFGGDEILIAFPDTD 170 Query: 436 PQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + +R+EK+L + FS GI K + + + +D ++Y K K + Sbjct: 171 KKTVENIVKRLEKKLIFNPVGLPVEFSYGIETWKPGENVEGIVQNADLQMYALKNLKKQK 230 >UniRef50_A0LCM0 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCM0_MAGSM Length = 344 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 4/163 (2%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 Y+++ + DA+TGL NR++L LEQ + V+ G + +D+D K +ND LGH Sbjct: 174 YEDLYDQARRDALTGLVNRRVLDERLEQEVANAVRYGHPLCLAYLDLDHFKAVNDVLGHA 233 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI--- 453 EGD+A+ ++ A+ IR SD R+GGDEF +IL + + + ER+ ++ + Sbjct: 234 EGDVALRQVSLALSGMIRDSDCLARVGGDEFAMILPHTDLERGRKFMERLCTTVRSLNIQ 293 Query: 454 APQKEI-GFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 AP + G S GI + + +D LY K R Sbjct: 294 APGHPVLGVSIGISQWHSGLAMDHWLEVTDAALYKAKAGGRCR 336 >UniRef50_Q1N062 PAS:GGDEF protein n=1 Tax=Bermanella marisrubri RepID=Q1N062_9GAMM Length = 312 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 4/159 (2%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 Y + + + D +TG N + EL +++ +SG +V + ID+D KQ+ND GH Sbjct: 152 YAELEQMSRKDGLTGALNIRAFKEELLDAMERYHRSGQNVTLVFIDLDDFKQVNDQYGHI 211 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI--- 453 GD +T A+ + R+ D R GGDEF ++L D+T Q A +R+ ++ Sbjct: 212 VGDEVLTTFAKTLLNQSRRCDAVARYGGDEFAMLLDDTTEQEALDFCKRLGSEIEFETGN 271 Query: 454 APQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQN 491 K + FS G+ +K+N T+ D + +D+ +Y +K++ Sbjct: 272 GKTKSMSFSFGMSQLKKNHRTVEDWFAEADQHMYRDKES 310 >UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0Y0_9NEIS Length = 528 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 10/158 (6%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +TGL NR+ L LEQ+LQ+ ++G + +D+D K +ND GH GD I L Sbjct: 356 TDTLTGLPNRRALEEALEQQLQRSRRNGEQASLVLLDIDHFKVVNDRYGHDAGDAVIRAL 415 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ-----HIAPQKEIG 460 +A+ ++IR D A R GG+EF ++L + + AA ER+ R++ H Sbjct: 416 GKAMSETIRNVDVAGRWGGEEFLVVLANVDEEGAAAFAERLRTRVESSTVAHGELHVRYT 475 Query: 461 FSSGIYAMKENDTLH-DAY-KASDERLYVNKQNKNSRS 496 S G+ + T H +A+ K +DE LY K + +R+ Sbjct: 476 ISLGVAPL---STPHREAWLKRADEALYRAKLDGRNRT 510 >UniRef50_B9QU21 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QU21_9RHOB Length = 365 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 8/155 (5%) Query: 343 ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAI 402 E++ D +T L NRK LE+ ++ ++SG + D+D K+ NDT GHQ GD + Sbjct: 188 ESLIDELTTLNNRKHFDNSLEKVIRNSIESGRGFALLMTDIDHFKKFNDTYGHQTGDQVL 247 Query: 403 TLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE-----KRLQHIAPQK 457 L+A ++KQ+I D A R GG+EF IIL + A ++ E+I K L + + Sbjct: 248 RLVALSVKQNISSQDVACRYGGEEFAIILPHAALDEAVEVAEKIRAAVMAKELVKRSTGE 307 Query: 458 EIG---FSSGIYAMKENDTLHDAYKASDERLYVNK 489 +G S+G+ A +D H +DE +Y K Sbjct: 308 NLGRITISAGVAAYNPDDNEHTIVSRADEAMYAAK 342 >UniRef50_Q0AG61 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Nitrosomonadaceae RepID=Q0AG61_NITEC Length = 984 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 12/153 (7%) Query: 347 DAMTGLYNRKILTPELEQRL---QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 D +T LYNR+ + ELEQ L ++ G+ + F D+D+ K +NDT GHQ GD + Sbjct: 561 DPLTNLYNRRRFSEELEQILSWAERYQHPGALLFF---DLDRFKFVNDTSGHQAGDAMLK 617 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI-----APQKE 458 ++A + +++R +D A RLGGDEF +IL + P A ++ ++I RL Sbjct: 618 MVADMLSRTVRTADIAARLGGDEFAVILPEIMPGAAIEVAKKILARLGETQLSLNGRTHN 677 Query: 459 IGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQ 490 I S GI E+ + +HD A+D +Y K+ Sbjct: 678 ISASIGIAIFPEHGNNVHDLLAAADLAMYQAKE 710 >UniRef50_A6Q588 Two-component response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q588_NITSB Length = 414 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 14/192 (7%) Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQ 367 F+ ++ + F ++ +MV+ H + I DA+TG YNR L ++ + Sbjct: 225 FLKKNFFNAEFVCRIDNVVKSMVQFH-----KIKELAIKDALTGCYNRYYLFDMGQKLFE 279 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 + V +D+D KQINDT GH GD + Q ++ S+R+ D+ +R GG+EF Sbjct: 280 NFKRQQKPVSIAILDLDHFKQINDTFGHSIGDEVLRHFGQILQNSLRQGDFVVRYGGEEF 339 Query: 428 CIILVDSTPQIAAQL-PERIEKRLQHIAPQKEIG------FSSGIYAMKENDTLHDAYKA 480 I + + + A ++ ERI KR+ + G FS GI +E L+ K Sbjct: 340 VIFFGNCSKEDAKRIVEERIRKRVHEDCIMTDDGQNVYYNFSCGICDSEEQ--LNQLIKK 397 Query: 481 SDERLYVNKQNK 492 +DE+LY+ K+ + Sbjct: 398 ADEKLYMAKKTR 409 >UniRef50_Q2BLE7 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLE7_9GAMM Length = 444 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 8/160 (5%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 Q R +D MTGL NR+ L + ++ L+ L +S + + ID+D K+INDT GH Sbjct: 276 QKAERLAHTDVMTGLDNRRSLYQKCDEILKFLNRSTDHLCAVVIDIDYFKKINDTWGHNI 335 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK 457 GD AI L+ +KQSIR++D A R GG+EF +IL ++ A + E++ R++ + + Sbjct: 336 GDHAIKLVGDLLKQSIRRTDIAARYGGEEFALILPNTDLHQAYKFAEKVRLRIEEMVIET 395 Query: 458 E-------IGFSSGIYAMKENDTLHDAYKASDERLYVNKQ 490 E F Y N+ + D A+D LY K+ Sbjct: 396 ENESIDLTASFGVATYNASMNE-VGDLLNAADIALYSAKR 434 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 100/189 (52%), Gaps = 2/189 (1%) Query: 309 ITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQK 368 + S + ++ L A+IL V + + + + +D +TGLYN+ L++ +Q+ Sbjct: 270 LKSFYTNITLSFLLAVILGFSVYIFLKDLEKFRYLSETDRLTGLYNKGKFNEVLQREIQR 329 Query: 369 LVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFC 428 + + I D+D K+INDT GH+ GD + LA+ IK++IRK+D+A R GG+EF Sbjct: 330 AKRYKRPLSLIIFDIDHFKKINDTYGHKVGDEVLKALAKLIKKNIRKTDFAARWGGEEFV 389 Query: 429 IILVDSTPQIAAQLPERIEKRLQ--HIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLY 486 I+ ++ + A +L E++ + ++ ++ S G+ ++ ++ D +D LY Sbjct: 390 ILAPETNVEGAKKLAEKLRQAVETYKFPTVGKVTISLGVAQLEPDEKPEDFIVRADMALY 449 Query: 487 VNKQNKNSR 495 K+ +R Sbjct: 450 KAKEGGRNR 458 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 5/154 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TG++NR+ L L++ L++ + G+ + + +D+D K+INDT GH GD + ++ Sbjct: 142 DGLTGVFNRRYLDTRLQEELERSRRHGNPLSIMMLDIDHFKEINDTHGHICGDYTLRKIS 201 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL-----QHIAPQKEIGF 461 + + + +R SD R GG+EFC IL +++ + A L ER ++ Q + Sbjct: 202 ELLLELVRTSDILGRYGGEEFCCILPETSFEQALVLAERCRTQVAASQFSCTDHQSRVTV 261 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S G+ + +DTL K +D+ LY K+ +R Sbjct: 262 SIGVTDLHRDDTLDSIIKRADDALYQAKRTGRNR 295 >UniRef50_A1K2R0 GGDEF/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2R0_AZOSB Length = 901 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 15/154 (9%) Query: 334 FRLYQNVS----------RENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 RLY++V+ R D +TG +NR+ E + ++S + +D+ Sbjct: 712 LRLYRDVTERKHHEQALQRLATLDPLTGTWNRRAFLERAEHERLRYLRSEHPASLVMLDL 771 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 D K++NDT GH GD + + ++Q +R +D RLGG+EF ++LVD+TP+ AA+L Sbjct: 772 DHFKRVNDTWGHAAGDAVLCHFVRVLQQRLRATDLLGRLGGEEFALLLVDTTPEGAAELT 831 Query: 444 ERIEKRL-QHIAPQKE----IGFSSGIYAMKEND 472 ER+ + +H P + I S+GI ++D Sbjct: 832 ERLRAAIAEHPLPLGDRTISITVSAGIAPFVQDD 865 >UniRef50_Q1NX84 GGDEF:GAF n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NX84_9DELT Length = 488 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 7/162 (4%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 +L++ V RE + D +TGLYNR+ L + L K ++ V + +D+D K++ND G Sbjct: 188 QLFERVRREAMHDELTGLYNRRYLQDSGRRELHKAERARQPVALLLLDLDHFKEVNDYWG 247 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR----- 449 H GD + LA ++ ++R+SD R GG+EF ++L D+ A QL +++ + Sbjct: 248 HLRGDRVLRELAGLLRCNLRQSDVPARYGGEEFVVLLPDTASGEAGQLADKLRRLVEEQL 307 Query: 450 -LQHIAPQKEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNK 489 L+ ++ + + G+ A + + L + +D RLY K Sbjct: 308 VLEEGEERRLVTATIGVAAYPADGNNLEELLAVADRRLYAGK 349 >UniRef50_A4VN31 Sensory box protein n=3 Tax=Proteobacteria RepID=A4VN31_PSEU5 Length = 474 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 6/165 (3%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 +LY + R D +TGL NR L L ++ ++G + + +D+D+ KQ+NDT G Sbjct: 303 QLYARLERMAQYDELTGLPNRACFRDRLSTALARVRRNGGRIALLYLDLDQFKQVNDTYG 362 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL-----VDSTPQIAAQLPERIEKR 449 H GD + +A+ + +R +D RLGGDEF ++L + ++ A++ + E Sbjct: 363 HGGGDQLLQTVAERLGGCVRDTDTVARLGGDEFVVLLESIIDAEDAQRVVAKIRDAFEAP 422 Query: 450 LQHIAPQKEIGFSSGIYAMKENDTLH-DAYKASDERLYVNKQNKN 493 L EIG S GI E+ + K +DER+Y+ K + Sbjct: 423 LPIAGHSLEIGMSIGIALYPEDGEVEAQLLKQADERMYLMKSGRG 467 >UniRef50_B9L7P4 Diguanylate cyclase/phosphodiesterase domain 1 n=1 Tax=Nautilia profundicola AmH RepID=B9L7P4_NAUPA Length = 614 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 84/153 (54%), Gaps = 17/153 (11%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 DA+T +YNR + L +++++ GS + F D+D K IND GH++GDL + LA Sbjct: 465 DALTQIYNRGTIEKILNKKIKE--TDGSLIFF---DIDHFKNINDNYGHEKGDLVLASLA 519 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE-----IGF 461 + I+++IR SDY R GG+EF IIL PQ ++ +I ++L+ I Q + I Sbjct: 520 RIIQKNIRSSDYFGRWGGEEFVIIL----PQAPYEIAYKIAEKLRKIIEQTDFDGLNITI 575 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 S G+ K+ D K DE LY + KNS Sbjct: 576 SLGVSEFKKGDNPEVVLKKVDEALY---EAKNS 605 >UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain protein) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9W6_SHEAM Length = 557 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 85/155 (54%), Gaps = 6/155 (3%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +TG+ NR+ + +L QRL L I ID+D+ K INDTLGH+ GD +T + Sbjct: 400 TDPLTGIANRRAFSEQL-QRLWHLDSQRRCRALIMIDIDRFKSINDTLGHEVGDKVLTDI 458 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI---APQKEIGFS 462 A+ I+ SIR D R GG+EF ++L ++ + A + ERI ++ + AP ++ + Sbjct: 459 ARVIRYSIRNRDQCGRWGGEEFVVLLASASEEEAGIIAERIRHNIESLSFPAPANKLKVT 518 Query: 463 SGI-YAMKENDTLH-DAYKASDERLYVNKQNKNSR 495 + + + E + H D + +DE +Y K +R Sbjct: 519 ASVGVCLDEGHSRHEDILRRADEAMYHAKDAGGNR 553 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 85/159 (53%), Gaps = 6/159 (3%) Query: 343 ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAI 402 + I D++TG +NR+ L LE+ L + + G + + +D+D K+INDT GH GD A+ Sbjct: 554 QAIRDSLTGCFNRRYLDETLERELSRSRREGYPLSLLILDLDHFKRINDTYGHMAGDQAL 613 Query: 403 TLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA---PQKEI 459 +LA+ ++ IR D R GG+EF I++ IAA+ E ++ I E+ Sbjct: 614 IVLAETLRAGIRHEDVLCRYGGEEFVILMPRMPLAIAAERAELWRSKIAEIRVTFGNFEL 673 Query: 460 GF--SSGIYAMKENDTLHDAY-KASDERLYVNKQNKNSR 495 F S+G+ A ++ + D +A+D+ LY K +R Sbjct: 674 SFTASAGVAAYPDHGKMPDELTQAADQALYTAKNEGRNR 712 >UniRef50_Q2BKT0 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKT0_9GAMM Length = 812 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 106/231 (45%), Gaps = 21/231 (9%) Query: 272 RDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVR 331 R + +NQ+E+ + ++ G ++ SI F+ S + LF + T + MV+ Sbjct: 316 RSVEVNQTEEAV---TDFIWSSQTGKKLHFSITAAPFVYFSEPATLF-VATDISEQKMVQ 371 Query: 332 MHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIND 391 H N D +TGL NR +L LEQ L +SG + ID+D K IND Sbjct: 372 DHISYMAN------HDTLTGLPNRALLNDRLEQALAASRRSGDLNALMFIDLDHFKNIND 425 Query: 392 TLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL--VDSTPQIAAQLPERIEKR 449 +LGH GDL + +A+ + +R D RLGGDEF I+L S Q ER+ + Sbjct: 426 SLGHGVGDLLLKKVAEILINEVRSCDTVARLGGDEFVILLQAFQSDVDQVTQDVERVCHK 485 Query: 450 LQHIAPQK--------EIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQN 491 L I Q IG S G+ D TL D + +D +Y K+N Sbjct: 486 LLTILSQPIEVKQHQLRIGASIGVVLFPMADKTLDDLMRFADTAMYHAKEN 536 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 7/182 (3%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 LT L + + +L + +S+++I DA+TGL+NR+ + LE+ + + + + I Sbjct: 1154 LTVAEHLALSLANLKLRETLSQQSIRDALTGLFNRRYMEESLEREIHRAQRHQRPMGIIM 1213 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 +D+D K NDT GH+ GD + L +++SIR SD A R GG+E +IL D++ Sbjct: 1214 LDIDHFKHFNDTFGHEAGDAVLRELGIFLQRSIRASDIACRYGGEELMLILPDASLADTK 1273 Query: 441 QLPERIE---KRLQ---HIAPQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKN 493 Q E+I K LQ H I S G+ A E+ T + A+D LY K Sbjct: 1274 QRAEQIRHDVKGLQIEYHHKLLDAIAISVGVAAFAEHGSTAQELIAAADRALYQAKAQGR 1333 Query: 494 SR 495 R Sbjct: 1334 DR 1335 >UniRef50_D1B7B3 Diguanylate cyclase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7B3_THEAS Length = 331 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 4/160 (2%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 L Q + I D +TGLYNR+ L+ + + + + G+ + +++D+D KQ+ND+LGH Sbjct: 160 LNQRLQEMAIRDHLTGLYNRRYLSEVFPREVARSRRYGTRLTLVSMDLDGFKQVNDSLGH 219 Query: 396 QEGDLAITLLAQAIKQSIRKS-DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 EGD + A+ ++ R+ DY R+GGDEF +ILV + A + R+E++++ Sbjct: 220 LEGDRVLAEFARLLEGCTRRQVDYPFRVGGDEFLLILVGVGEEEAEGVMARLEEQVRREL 279 Query: 455 PQKEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKN 493 P +G S G+ + + L +D R+Y K+ K Sbjct: 280 PV--VGLSHGVVQVDVSSPDLDGVLMEADRRMYRAKRAKG 317 >UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID=C6DCR6_PECCP Length = 532 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 8/178 (4%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 L +IL + +H R+ + +S + +D +TGL NR+ + +E L K + V I Sbjct: 344 LKRVILFGTLLLHKRIGK-LSLQAHTDPLTGLLNRRGIYESIELILPK----SNQVAAIV 398 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 ID+D K++NDT GH GD I LLA++IKQ R+SD R GG+EF +L D+ + A Sbjct: 399 IDIDHFKRVNDTYGHNIGDDVIRLLAKSIKQGSRESDLICRTGGEEFLALLPDTDMKQAV 458 Query: 441 QLPERIEKRLQHIA-PQKE-IGFSSGIYA-MKENDTLHDAYKASDERLYVNKQNKNSR 495 + ER+ K+++ + P E I S G+ + + + + K +D+ LY K +R Sbjct: 459 DIAERLRKKVEKMPLPIPENITISLGVTCFIPGAEQIDNVLKIADDALYQAKHEGRNR 516 >UniRef50_B1G121 Diguanylate cyclase n=4 Tax=Burkholderia RepID=B1G121_9BURK Length = 524 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 101/190 (53%), Gaps = 14/190 (7%) Query: 275 IINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWK---------SVLF---WILT 322 + + D + + ++VH +PG ++ + + S W+ ++ F +++ Sbjct: 267 VARSAVDGVQRMFTFVH-VPGTPLIAAVAPAVDDVLSPWRHRAMIVGALTLAFGTVFVIV 325 Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 + +L +R R + R +D +TGL NR++L L++ ++ ++G + + ID Sbjct: 326 SWLLAFALRDKLRAQAALMRLAATDPLTGLSNRRVLDNRLDEEWRRARRTGQPLSALFID 385 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS-DYAIRLGGDEFCIILVDSTPQIAAQ 441 +D K+ NDT GH GD A++ +A+ I ++R++ D R GG+EF +IL D++ AA Sbjct: 386 IDHFKRFNDTYGHASGDDALSAVAECISSTVRRAVDLVARYGGEEFAVILPDTSADGAAA 445 Query: 442 LPERIEKRLQ 451 + E+I + +Q Sbjct: 446 VAEKIRRNVQ 455 >UniRef50_A3Y6G1 Sensory box protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6G1_9GAMM Length = 702 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 12/160 (7%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL NR++L LEQ + ++ + SS+ +D+D+ K++ND GH +GDL + +A Sbjct: 263 DHLTGLPNRRLLLDRLEQLIHRIHHTNSSLALFYLDLDRFKEVNDKFGHAKGDLLLQDVA 322 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVD----------STPQIAAQLPERIEKRLQHIAPQ 456 + + Q +RKSD RLGGDEF II+ + + +IA + + + + Q Sbjct: 323 KRLTQCVRKSDTVARLGGDEFTIIIAELEDEDKANKITVERIAQAILNALNRPFKLDNEQ 382 Query: 457 KEIGFSSGIYAMKENDTLHDA-YKASDERLY-VNKQNKNS 494 I S GI E+ D A+D+ +Y KQ KN Sbjct: 383 VYISASIGITFYPEDANFSDVLLNAADQAMYAAKKQGKNC 422 >UniRef50_A9VWI8 Diguanylate cyclase n=2 Tax=Methylobacterium extorquens group RepID=A9VWI8_METEP Length = 1428 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 10/151 (6%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL NR +LEQ + + ++ S+ + +D+D+ K +NDTLGHQ GD + ++A Sbjct: 300 DPLTGLPNRLHFREQLEQEIARTKRTSSTFALLCLDLDRFKLVNDTLGHQAGDRLLKVVA 359 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDST-PQIAAQLPERIEKRLQHIAPQKEIGFSSGI 465 Q IK +R D RLGGDEF II + + A++L ER+ + + P G+ +G+ Sbjct: 360 QRIKSVLRTEDTLARLGGDEFVIIQTNCARAEDASRLAERVIAAM--LPPVDLGGYPAGV 417 Query: 466 -----YAMKENDTL-HD-AYKASDERLYVNK 489 A+ D+L HD Y +D+ LY K Sbjct: 418 GVSIGIALAPQDSLDHDHLYALADQALYRAK 448 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 7/155 (4%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 DA+TGL NR++ LEQ L + G+SV + +D+D L+ +ND GH GD + ++ Sbjct: 991 DALTGLPNRRLFHQRLEQALAAAERGGTSVTLLLVDLDTLRDVNDIHGHDAGDAVLREVS 1050 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDS-----TPQIAAQLPERIEKRLQHIAPQKEIGF 461 + + +R SD RLGGDEF ++L + + A L ER+ + L + + Sbjct: 1051 SRLVEGLRASDTVARLGGDEFALLLTEPLRLEHAAKHAEVLLERLRQPLVYRGHRLTCTA 1110 Query: 462 SSGIYAMKEND-TLHDAYKASDERLYVNK-QNKNS 494 S G+ A ++ +D K +D LY K Q +NS Sbjct: 1111 SIGLAAYPDHHRNPYDLLKDADIALYRAKAQGRNS 1145 >UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=Q48MB2_PSE14 Length = 509 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 21/229 (9%) Query: 274 IIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMH 333 ++I QSED ++ L G L + IL+ LT L+ + R H Sbjct: 280 VVIGQSEDEVYAVWRRNAWLVGSATSVLCLGILW-------------LTWLLCRELRRRH 326 Query: 334 FRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTL 393 R ++ +D +TGL NR+ L +E + +SG + + ID+D K N+ Sbjct: 327 -RAEDALASLAATDGLTGLDNRRQLDEAMETEWARAQRSGKQLSLLMIDVDHFKAFNERH 385 Query: 394 GHQEGDLAITLLAQAIKQSIRK-SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH 452 GHQ GD A+ L+AQ I +IR+ D R GG+EF ++L ++ A + E+I K + Sbjct: 386 GHQGGDEALRLIAQTISFNIRRPGDRVARYGGEEFVVVLPETELPGAMMIAEKIRKAAES 445 Query: 453 IA----PQKEIGFSSGIYA--MKENDTLHDAYKASDERLYVNKQNKNSR 495 + Q+ I S G+ + +++ D L + +D+ LY K +R Sbjct: 446 LPLFPDAQQPITVSIGVVSEMVRQGDKLEAFFGIADKALYQAKHKGRNR 494 >UniRef50_B0SIV5 GGDEF domain receiver component of a two-component response regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SIV5_LEPBA Length = 298 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 8/164 (4%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 L+ + I D MTGLYNR+ + +EQ Q+ + S + ID+DK K INDT GH Sbjct: 128 LHDQLRETAIRDVMTGLYNRRYMEERIEQEFQRCKRHDSLLSMAMIDIDKFKNINDTYGH 187 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP 455 + GD I LA +K S RKSD R GG+EF I+ ++ A ++ +R+ + + + Sbjct: 188 EIGDQVIKQLAHELKTSFRKSDIISRFGGEEFVILFPETGVVDATRILDRVRENVSKLEM 247 Query: 456 QKE------IGFSSGIYAMKEND--TLHDAYKASDERLYVNKQN 491 + + FS G+ +D + + K +D+ LY K + Sbjct: 248 KSDTDQIFHFTFSGGVAGGDLSDIQSNQELLKIADKNLYEAKSS 291 >UniRef50_C5BTH6 Response regulator receiver domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BTH6_TERTT Length = 221 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 7/151 (4%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +TGLYN++ L + L++ ++G I +D+D K+ NDT GH GD A+ L Sbjct: 42 TDPLTGLYNKRYFDSVLHRELERTQRTGMPTTLIMLDVDHFKRFNDTHGHVAGDHALKHL 101 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH-------IAPQKE 458 A+ ++ ++R D A R GG+EF ++L + +A Q+ ER+ ++L + A + Sbjct: 102 ARTLRSNLRNLDIACRFGGEEFVVVLPSTPLLVAIQVAERLRQQLTNSTLVIDASAMKLT 161 Query: 459 IGFSSGIYAMKENDTLHDAYKASDERLYVNK 489 F Y + D L D + D++LY+ K Sbjct: 162 ASFGVDTYTHEHRDNLLDFVERVDKQLYLAK 192 >UniRef50_A8F6M9 Diguanylate cyclase n=1 Tax=Thermotoga lettingae TMO RepID=A8F6M9_THELT Length = 170 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + R +I+D + GL+NR + E+ + + I ID+D K++NDT GHQ Sbjct: 6 EELERISITDKLNGLFNRYKMDEEMRKAFYLWKRYQRPFSLIMIDIDWFKKVNDTYGHQI 65 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--IAP 455 GD + L +K+S+R SD R GG+EF ++ ++ + A L E+I +++ A Sbjct: 66 GDKVLQELGALLKKSLRASDIVSRWGGEEFLVLSLEIDEKGAITLAEKIRSEIENYSFAE 125 Query: 456 QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +I S G+ + K ++T+ + + DE++Y+ KQ+ +R Sbjct: 126 NIKITVSIGVCSAKNHETIDELLVSVDEKMYIAKQSGRNR 165 >UniRef50_C5UZW0 Diguanylate cyclase n=2 Tax=Gallionellaceae RepID=C5UZW0_9PROT Length = 599 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 5/154 (3%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TG NR+ L ++ +++ +S S+ +D+D K++NDT+GHQ GD A+ L Sbjct: 441 DQLTGALNRRGLDAAFDRESRRVDRSHESLCIALLDIDNFKRLNDTMGHQVGDKALIHLC 500 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL-----QHIAPQKEIGF 461 IK+++R SD R GG+EF +IL D T AA ER+++ L H + + F Sbjct: 501 HVIKEALRPSDSVARYGGEEFVLILPDVTLAEAALTVERLQRELTKQFFMHENDRILVTF 560 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S+G+ + N++ + +D+ +Y KQ +R Sbjct: 561 SAGVAQLAPNESQEELIGRADKAMYQAKQTGKNR 594 >UniRef50_C4XIT4 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XIT4_DESMR Length = 365 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 2/151 (1%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +DA+T L NR+ L + + + ++ + ID+D KQ NDTLGHQEGD + + Sbjct: 207 TDALTQLNNRRAFFDALRREVARSLRHKEEFVLAYIDLDNFKQANDTLGHQEGDRILICM 266 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGI 465 A+A+++S+R D R+GGDEF +I+ + A ++ ER+ KR + S G+ Sbjct: 267 AEAVRESLRAEDLGARIGGDEFAVIIANVDLAKAKEVIERLTKRFDTNKGNSPVTMSVGL 326 Query: 466 YAMK-ENDTLHDA-YKASDERLYVNKQNKNS 494 E L DA K +D +Y K++K + Sbjct: 327 ARFNLEYPQLPDALMKEADVAMYNAKKHKGN 357 >UniRef50_A8SWL2 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SWL2_9FIRM Length = 1039 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 15/175 (8%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 N + R ++N R +D +TGL N ++EQRL ++ + + I +D+D+ K Sbjct: 865 NKADVRLRNWENTYR---TDPLTGLLNHAAFRSDMEQRL---LECTHTAVMIMMDVDRFK 918 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILV-------DSTPQIAA 440 Q NDT GH GD + L+AQA++ ++R D+A R+GGDEF +L D + A Sbjct: 919 QYNDTYGHHNGDKYLVLVAQALQAALRGDDHACRMGGDEFAAMLFFNKSVSDDVIRERAQ 978 Query: 441 QLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 Q+ +++ ++ A + G S G + T ++ Y+ +D LY K++ R Sbjct: 979 QIFDKVNLTVK--ATEGGTGISMGAVIARTELTFNEMYEEADNALYDVKESGRGR 1031 >UniRef50_B0S9C7 Two-component response regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9C7_LEPBA Length = 397 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 10/171 (5%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 R+ Q + + D+MT L+NR+ L + + ++ + G + + +D+DKLK IND G Sbjct: 221 RINQKIEDLSRVDSMTELFNRRHLLEQFDLYKKRSHREGFVIGLVILDLDKLKTINDRYG 280 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI- 453 H++GDLAI A+ +K R +D A R+GGDEFC+++ + L E I +++ + Sbjct: 281 HKQGDLAIQAFAKTLKSRTRITDIAARIGGDEFCLLVSPIDKEGLHTLTESIRGKMEELK 340 Query: 454 -----APQKEIGFSSGI----YAMKENDTLHDAYKASDERLYVNKQNKNSR 495 AP + + + I + +++ + + Y D LY +K +R Sbjct: 341 IPIYNAPNESLTLTVSIGGTLFHPEDDPSFDELYHKIDTALYTSKNEGRNR 391 >UniRef50_A6AWI3 VbsG n=1 Tax=Vibrio harveyi HY01 RepID=A6AWI3_VIBHA Length = 445 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 82/289 (28%), Positives = 134/289 (46%), Gaps = 48/289 (16%) Query: 218 NVMSLLTPVYVAGQLKGIVLLDINKN-----------NLRNIFYTHDRPLLWRFLNVTLT 266 + ++ +PVY G + G V++DI N NL N FY + F N + Sbjct: 180 DTFTVTSPVYKEGTIVGDVVVDIRVNYQNLNGRTVETNLVNGFYY----VTVGFENYPFS 235 Query: 267 DTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSV-LFWILTALI 325 + + I+ ++Q LP + + ID L+ + +W V F L A Sbjct: 236 NLAGALILPIDNDSAIIYQ-------LP---IIKVLIDNLWVLFVTWAIVGTFHRLYA-- 283 Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + V+ L + +I D +T LYNRK+ + + ++ G + I ID K Sbjct: 284 --SNVQHRSHLAHAIKNASI-DELTSLYNRKVFE---DSDFENAIKEGHYAV-ILIDGKK 336 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL----VDSTPQIAAQ 441 KQINDT GH+ GDLA+ +A+ +K + R+SD+ IRLGGDEF +++ ++S ++A Sbjct: 337 FKQINDTHGHKAGDLALIHIARTMKSTFRQSDWLIRLGGDEFVVVMPLCPLESAERLATN 396 Query: 442 LPERIEKRLQHIAPQKEIGFS----SGIYAMKENDTLHDAYKASDERLY 486 L E I R P G S +G+ + L D + +D+ +Y Sbjct: 397 LRENIVAR-----PLGRYGISVQVTTGVAKATSEEMLMDVIERADQDMY 440 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 84/151 (55%), Gaps = 2/151 (1%) Query: 342 RENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLA 401 +++ D +TG+YNR+ L +LE+ ++ + + I D+D K IND+ GH GD Sbjct: 613 KQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKHINDSFGHDVGDKV 672 Query: 402 ITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIAPQKEI 459 + +A+ + ++IR +D R GG+EF II ++T + A L E++ ++ H + Sbjct: 673 LKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRNLHFEEGINV 732 Query: 460 GFSSGIYAMKENDTLHDAYKASDERLYVNKQ 490 S G+ +++++DT K +DE LY K+ Sbjct: 733 TCSFGVASLEKHDTKETLLKRADEALYEAKK 763 >UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLJ7_9GAMM Length = 478 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 18/216 (8%) Query: 293 LPGG-----IRVSLSID---ILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSREN 344 +PGG RV I+ + + + W + AL V M RLYQ + Sbjct: 246 IPGGSWQLEARVKPDINAHGVPHALLDLWGMLASLTFGALSAYTCVLMR-RLYQR----S 300 Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITL 404 ++D++TGLYNR+ EQ + V+ + + ID+D+ KQIND GHQ GD + Sbjct: 301 VTDSLTGLYNRQHFKFRAEQEASRAVRYNQPLTMLMIDIDQFKQINDKFGHQTGDTVLQQ 360 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH----IAPQKEIG 460 +Q I+ ++R+SD R GG+EF ++L S + A Q +RI L I Sbjct: 361 ASQYIRDNLRESDLLGRYGGEEFIVLLPQSDLEQATQCADRIRDSLDKSIFIYGSLVSIS 420 Query: 461 FSSGIYAMKENDTLHDAYKA-SDERLYVNKQNKNSR 495 S G+ + ++D + +D+ LY K+N +R Sbjct: 421 VSVGLAQQSPDTFVYDELVSQADQALYTAKRNGRNR 456 >UniRef50_D1C1N0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1N0_SPHTD Length = 942 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 12/157 (7%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +T L NR L+ L + +V + +D+D K++NDTLGH+ GD + LA Sbjct: 499 DPLTNLPNRAFFMDRLQSSLAAGQRRSDAVAVLFVDLDGFKEVNDTLGHEAGDRLLVELA 558 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDST-PQIAAQLPERIEKRL--------QHIAPQK 457 +++++R+ D RLGGDEF I+LVD P A Q ERI RL Q I + Sbjct: 559 DRLRRALREQDVIARLGGDEFAIVLVDVVEPNDAVQTAERILDRLREPVLLDGQPIPIRA 618 Query: 458 EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 IG + G DT+ + +D LY K+ S Sbjct: 619 SIGIALGTPGRDRPDTV---LRQADSALYAAKRAGKS 652 >UniRef50_Q2BKU0 Sensory box protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKU0_9GAMM Length = 342 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 82/151 (54%), Gaps = 3/151 (1%) Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 DA+TG+YNR++ L+ +++ + + I D+D K +ND GH GD + +A Sbjct: 180 DALTGIYNRRMFESFLDIEIKRAKRYSQPMCVILADIDLFKHVNDRYGHSSGDKVLVEVA 239 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSS--G 464 ++Q +R+SDY R GG+EF IIL ++ ++A + ER+ ++ + + I + G Sbjct: 240 LTLQQHLRESDYLARWGGEEFAIILPNTATKVAMETAERLRHEVESLVTTEGISVTCSFG 299 Query: 465 IYAMKENDTLHDAYKASDERLYVNK-QNKNS 494 + + D + D+ LY+ K QN+N+ Sbjct: 300 VTQFHQKDCGTSIFSRMDQALYMAKDQNRNT 330 >UniRef50_B8FWQ0 Diguanylate cyclase n=2 Tax=Desulfitobacterium hafniense RepID=B8FWQ0_DESHD Length = 248 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 11/149 (7%) Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D+MTGL N+ + L ++K + ID+D+ K INDT GH GD I + Sbjct: 74 TDSMTGLPNKGFMYLRLNIDMEKYAKQEKEYSLAMIDIDRFKNINDTYGHLAGDKVIKEV 133 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH------IAPQKEI 459 A +++++R SD IR GG+EF I+L +++ + AA L ERI +++ IA QK + Sbjct: 134 AGLLRKNVRASDEVIRWGGEEFAILLPETSEEGAANLIERIRNLMENHDFGPEIASQK-V 192 Query: 460 GFSSGIYAMKENDTLHDAYKASDERLYVN 488 FS+G+ + K+ + + KA + RL N Sbjct: 193 TFSAGVVSYKKLEEV----KAKENRLTNN 217 >UniRef50_Q31E96 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E96_THICR Length = 775 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 84/149 (56%), Gaps = 2/149 (1%) Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 +++D +TG+YNR+ L L+ ++++ + GS+ I +D+D K++ND GH GD + Sbjct: 616 SVTDHLTGVYNRQYLDQRLDSEVERVNRYGSTFSVIMMDLDNFKKVNDKFGHLVGDEVLV 675 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIG--F 461 + AQ +++ IRK D R GG+EF +I ++ A QL +++ K ++ + I Sbjct: 676 VFAQTVEKEIRKIDIFGRWGGEEFILICPETPLTHAIQLGKKVRKSIESQDYPENISQTV 735 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQ 490 S G+ + + ++D +D+ LY KQ Sbjct: 736 SLGVAEYQTGEAINDCLNRADQNLYKAKQ 764 >UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRM0_AZOC5 Length = 514 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 5/181 (2%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 I AL+L + + RL + + +++D +TG+ NR+ + Q+ + GS V + Sbjct: 306 IAIALVLRHDLMRRSRLQAELLQLSLTDDLTGIANRRRFFDVAIREWQRAQRLGSPVAVL 365 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK-SDYAIRLGGDEFCIILVDSTPQI 438 ID+D+ K +ND LGH GD + +AQ I+ S+R+ +D A R GG+EF IL D+ Sbjct: 366 MIDIDRFKLLNDRLGHAAGDAVLQAIAQLIRHSLRRPADLAARYGGEEFTAILPDTDMAG 425 Query: 439 AAQLPERIEKRLQH--IAPQKEIGFSSGIYA--MKENDTLHDAYKASDERLYVNKQNKNS 494 A Q ERI +++ I + S GI A N+T + A+D LY K++ + Sbjct: 426 AFQTAERIRTQVERDVIRGDHPVTVSIGIAAAIASPNETFENVVAAADRALYRAKESGRN 485 Query: 495 R 495 R Sbjct: 486 R 486 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76237 Uncharacterized protein yeaJ n=99 Tax=Enterobact... 645 0.0 UniRef50_UPI0001A43649 putative diguanylate cyclase n=1 Tax=Pect... 451 e-125 UniRef50_D0YXF8 Putative two-component response regulator and GG... 417 e-115 UniRef50_Q6LT28 Putative uncharacterized protein n=1 Tax=Photoba... 411 e-113 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 248 4e-64 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 245 3e-63 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 244 6e-63 UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilu... 243 1e-62 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 242 2e-62 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 240 9e-62 UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobiu... 239 2e-61 UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 238 4e-61 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 237 5e-61 UniRef50_Q3A5K1 Two component signal transduction response regul... 237 8e-61 UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteri... 237 8e-61 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 237 1e-60 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 237 1e-60 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 237 1e-60 UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas Rep... 236 1e-60 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 236 1e-60 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 236 1e-60 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 236 2e-60 UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas camp... 236 2e-60 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 235 2e-60 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 235 3e-60 UniRef50_A1HS81 Response regulator receiver modulated diguanylat... 235 3e-60 UniRef50_B6ESW5 Membrane associated GGDEF protein n=1 Tax=Aliivi... 235 3e-60 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 235 4e-60 UniRef50_C8R031 Diguanylate cyclase with GAF sensor n=2 Tax=Desu... 235 4e-60 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 234 6e-60 UniRef50_Q7P0N5 Putative uncharacterized protein n=1 Tax=Chromob... 233 9e-60 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 233 1e-59 UniRef50_C9R8E3 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 233 1e-59 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 233 1e-59 UniRef50_C6HZ09 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 233 1e-59 UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acid... 233 1e-59 UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 232 2e-59 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 232 2e-59 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 232 2e-59 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 232 3e-59 UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=... 231 4e-59 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 231 4e-59 UniRef50_B1I2H9 Diguanylate cyclase n=3 Tax=Clostridia RepID=B1I... 231 5e-59 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 230 6e-59 UniRef50_C6MLU9 Response regulator receiver modulated diguanylat... 230 6e-59 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 230 7e-59 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 230 8e-59 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 230 8e-59 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 230 1e-58 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 230 1e-58 UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulo... 230 1e-58 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 230 1e-58 UniRef50_B7KW39 Diguanylate cyclase n=3 Tax=Methylobacterium ext... 230 1e-58 UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax... 229 2e-58 UniRef50_B8GTD8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 228 4e-58 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 228 5e-58 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 228 5e-58 UniRef50_A1HSJ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 227 5e-58 UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingo... 227 5e-58 UniRef50_Q7MFJ4 GGDEF family protein n=2 Tax=Vibrio vulnificus R... 227 5e-58 UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (... 227 5e-58 UniRef50_C6XL77 Response regulator receiver modulated diguanylat... 227 6e-58 UniRef50_B3E243 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 227 7e-58 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 227 8e-58 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 227 8e-58 UniRef50_Q31E96 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 227 8e-58 UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 227 9e-58 UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 227 9e-58 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 227 9e-58 UniRef50_C9QJS4 Putative two-component response regulator and GG... 227 9e-58 UniRef50_A6CUQ3 Putaitive GGDEF domain n=1 Tax=Vibrio shilonii A... 227 1e-57 UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 226 1e-57 UniRef50_A8GZ56 Diguanylate cyclase n=3 Tax=Alteromonadales RepI... 226 1e-57 UniRef50_B9L5Q2 Diguanylate cyclase n=2 Tax=Nautilia profundicol... 226 1e-57 UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nit... 226 1e-57 UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 226 2e-57 UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 226 2e-57 UniRef50_Q31GI5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 225 2e-57 UniRef50_Q2W7A4 Response regulator n=4 Tax=Proteobacteria RepID=... 225 2e-57 UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 225 3e-57 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 225 3e-57 UniRef50_A6VEW2 Ggdef domain protein n=8 Tax=Pseudomonas RepID=A... 225 3e-57 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 225 3e-57 UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Nep... 225 3e-57 UniRef50_D1U9W6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 225 3e-57 UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geob... 225 3e-57 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 225 3e-57 UniRef50_Q1NSC4 GGDEF:GAF n=2 Tax=delta proteobacterium MLMS-1 R... 225 4e-57 UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 225 4e-57 UniRef50_Q2IXE2 Response regulator receiver modulated diguanylat... 224 5e-57 UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 224 6e-57 UniRef50_A0L7G7 Response regulator receiver modulated diguanylat... 224 6e-57 UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geob... 224 7e-57 UniRef50_C6WY37 Diguanylate cyclase n=1 Tax=Methylotenera mobili... 224 8e-57 UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniiba... 224 8e-57 UniRef50_A3QI98 Diguanylate cyclase n=1 Tax=Shewanella loihica P... 224 9e-57 UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 224 9e-57 UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 223 9e-57 UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turn... 223 1e-56 UniRef50_Q3SK04 Putative diguanylate cyclase (GGDEF domain) n=1 ... 222 2e-56 UniRef50_Q2SAD1 Response regulator containing a CheY-like receiv... 222 2e-56 UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID... 222 2e-56 UniRef50_A8F6M9 Diguanylate cyclase n=1 Tax=Thermotoga lettingae... 222 2e-56 UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 222 2e-56 UniRef50_Q7MFB4 GGDEF family protein n=2 Tax=Vibrio vulnificus R... 222 2e-56 UniRef50_Q7WZ31 MmoQ n=1 Tax=Methylococcus capsulatus RepID=Q7WZ... 222 2e-56 UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 222 2e-56 UniRef50_Q0VQ38 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q... 222 2e-56 UniRef50_B3E241 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 222 3e-56 UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 222 3e-56 UniRef50_Q2SP63 Response regulator containing a CheY-like receiv... 222 3e-56 UniRef50_B0TAR1 Putative uncharacterized protein n=1 Tax=Helioba... 222 3e-56 UniRef50_B3PG18 GGDEF domain protein n=1 Tax=Cellvibrio japonicu... 222 3e-56 UniRef50_A9FTU9 Putative membrane protein (GAF and GGDEF domain)... 222 3e-56 UniRef50_A1W3W7 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID... 222 3e-56 UniRef50_B2V8X7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 222 3e-56 UniRef50_Q1NX84 GGDEF:GAF n=3 Tax=delta proteobacterium MLMS-1 R... 222 3e-56 UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longb... 222 4e-56 UniRef50_A5IF46 Sensor histidine kinase n=5 Tax=Bacteria RepID=A... 221 4e-56 UniRef50_A1VD04 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgar... 221 4e-56 UniRef50_C0QDC5 Signal transduction family protein (GGDEF domain... 221 4e-56 UniRef50_Q21F47 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 221 4e-56 UniRef50_A4X2X1 Diguanylate cyclase n=5 Tax=Actinomycetales RepI... 221 5e-56 UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax... 221 5e-56 UniRef50_B1A0P6 Diguanylate cyclase response regulator n=1 Tax=C... 220 6e-56 UniRef50_B9QXS2 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 220 6e-56 UniRef50_A4BB60 Putative sensor protein n=1 Tax=Reinekea blanden... 220 7e-56 UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 220 8e-56 UniRef50_A5F641 GGDEF family protein n=40 Tax=Gammaproteobacteri... 220 9e-56 Sequences not found previously or not previously below threshold: UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 240 1e-61 UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanoph... 240 1e-61 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 239 3e-61 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 237 7e-61 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 236 2e-60 UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing pr... 235 2e-60 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 235 4e-60 UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthom... 235 4e-60 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 234 5e-60 UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=... 233 9e-60 UniRef50_Q04NQ1 GGDEF family protein n=7 Tax=Leptospira RepID=Q0... 233 1e-59 UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 232 2e-59 UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobact... 232 2e-59 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 232 3e-59 UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepI... 232 3e-59 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 231 4e-59 UniRef50_B9ZS17 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 231 4e-59 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 231 5e-59 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 231 5e-59 UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobac... 231 6e-59 UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burk... 230 6e-59 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 230 6e-59 UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 230 7e-59 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 230 8e-59 UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 230 9e-59 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 230 1e-58 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 230 1e-58 UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepI... 229 1e-58 UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 229 2e-58 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 228 3e-58 UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter Rep... 228 3e-58 UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 228 4e-58 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 228 4e-58 UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 227 5e-58 UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 227 6e-58 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 227 7e-58 UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=... 227 8e-58 UniRef50_C7HZC5 Diguanylate cyclase n=1 Tax=Thiomonas intermedia... 227 8e-58 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 227 9e-58 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 227 1e-57 UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 227 1e-57 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 226 1e-57 UniRef50_Q2VZ27 Response regulator containing a CheY-like receiv... 226 1e-57 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 226 1e-57 UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesi... 226 1e-57 UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnic... 226 1e-57 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 226 2e-57 UniRef50_B1Y3T8 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii... 225 2e-57 UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID... 225 2e-57 UniRef50_Q478M9 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 225 2e-57 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 225 3e-57 UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Synt... 225 3e-57 UniRef50_A4XPL1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 225 4e-57 UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 225 4e-57 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 225 4e-57 UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain prote... 225 4e-57 UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerob... 224 4e-57 UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptu... 224 5e-57 UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID... 224 5e-57 UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax... 224 5e-57 UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliil... 224 5e-57 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 224 5e-57 UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=... 224 5e-57 UniRef50_D1SQW2 Diguanylate cyclase n=1 Tax=Acidovorax avenae su... 224 6e-57 UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomona... 224 6e-57 UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing pr... 224 7e-57 UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum... 224 7e-57 UniRef50_C4XRL8 GGDEF domain protein n=2 Tax=Desulfovibrio RepID... 224 7e-57 UniRef50_B8FL29 Response regulator receiver modulated diguanylat... 224 7e-57 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 224 8e-57 UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromob... 224 9e-57 UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobact... 223 1e-56 UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvest... 223 1e-56 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 223 1e-56 UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnet... 223 1e-56 UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 223 1e-56 UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelo... 223 1e-56 UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 223 1e-56 UniRef50_Q1D817 HAMP domain/GAF domain/GGDEF domain protein n=3 ... 223 1e-56 UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteoba... 223 1e-56 UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=De... 223 1e-56 UniRef50_Q3JE99 Response regulator receiver modulated diguanylat... 223 1e-56 UniRef50_Q2IF81 Response regulator receiver modulated diguanylat... 223 2e-56 UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-... 223 2e-56 UniRef50_A1WXD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 222 2e-56 UniRef50_Q21HV6 Response regulator receiver modulated diguanylat... 222 2e-56 UniRef50_Q0G1R3 Periplasmic sensor diguanylate cyclase (GGDEF) n... 222 2e-56 UniRef50_B1Y766 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii... 222 2e-56 UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthono... 222 2e-56 UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 222 2e-56 UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 222 2e-56 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 222 2e-56 UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thioox... 222 2e-56 UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain... 222 2e-56 UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG8... 222 3e-56 UniRef50_A0LD73 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 222 3e-56 UniRef50_C5S9J2 Diguanylate cyclase n=1 Tax=Allochromatium vinos... 222 3e-56 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 222 3e-56 UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica R... 221 4e-56 UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 221 4e-56 UniRef50_C1D6K0 GGDEF domain protein n=1 Tax=Laribacter hongkong... 221 4e-56 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 221 4e-56 UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 221 4e-56 UniRef50_Q88L38 Sensory box protein n=12 Tax=Pseudomonas RepID=Q... 221 5e-56 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 221 5e-56 UniRef50_Q47C21 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 221 5e-56 UniRef50_Q7NQQ0 Putative uncharacterized protein n=1 Tax=Chromob... 221 6e-56 UniRef50_B9ZLB8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 221 6e-56 UniRef50_Q02P32 Putative two-component response regulator n=6 Ta... 221 6e-56 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 221 6e-56 UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 220 7e-56 UniRef50_A9BVC7 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID... 220 7e-56 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 220 7e-56 UniRef50_Q30XX0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desul... 220 7e-56 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 220 7e-56 UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 220 8e-56 UniRef50_Q2L341 Putative signaling protein n=3 Tax=Bordetella Re... 220 8e-56 UniRef50_Q1J085 Diguanylate cyclase n=1 Tax=Deinococcus geotherm... 220 8e-56 UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobac... 220 9e-56 UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID... 220 9e-56 UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus... 220 9e-56 >UniRef50_P76237 Uncharacterized protein yeaJ n=99 Tax=Enterobacteriaceae RepID=YEAJ_ECOLI Length = 496 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 496/496 (100%), Positives = 496/496 (100%) Query: 1 MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSI 60 MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSI Sbjct: 1 MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSI 60 Query: 61 AAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTI 120 AAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTI Sbjct: 61 AAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTI 120 Query: 121 VEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN 180 VEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN Sbjct: 121 VEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN 180 Query: 181 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI 240 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI Sbjct: 181 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI 240 Query: 241 NKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVS 300 NKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVS Sbjct: 241 NKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVS 300 Query: 301 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP 360 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP Sbjct: 301 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP 360 Query: 361 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI 420 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI Sbjct: 361 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI 420 Query: 421 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA 480 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA Sbjct: 421 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA 480 Query: 481 SDERLYVNKQNKNSRS 496 SDERLYVNKQNKNSRS Sbjct: 481 SDERLYVNKQNKNSRS 496 >UniRef50_UPI0001A43649 putative diguanylate cyclase n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A43649 Length = 494 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 172/497 (34%), Positives = 268/497 (53%), Gaps = 23/497 (4%) Query: 11 FIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAA 70 I A L ++ L E+ R + Y+ Y+ + S+ +++ NQ+IA + RA Sbjct: 1 MIVACTTALFTALLFHEV----RNLQNYMGYVAENGKSALFHEESINQNIATRLSRAFF- 55 Query: 71 EQSEVSPEQRR-----AICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAA 125 S SP+ IC+ E+ + G NL A L GT QT +T C+ Sbjct: 56 --SRTSPDNHTDAEVAEICQHVETEGSISGFNLVAKTMNNLEGTFQTLNTSCEEWGRDIG 113 Query: 126 LLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQ 185 L + + + + A + YY+DL+ Y+Y VN + NNW + Sbjct: 114 ALSVIHRTESDALPKYSFSNYTDYAFKNIRYYIDLSHNYIYINRRVNTRNYTFNNW-LVN 172 Query: 186 SGS----------IGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGI 235 +GS I ID ++ + G ++S IYQD TK N++S+LTPV+++ ++KGI Sbjct: 173 NGSRINIARSAHTITIDDNALDDLIRGENIVSHIYQDGYTKNNIISMLTPVFLSDKVKGI 232 Query: 236 VLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPG 295 ++ D+N N+L F T DRPLLW+FL++ +TD +G +II ++ F +++ + Sbjct: 233 LITDVNINDLVVSFKTVDRPLLWKFLSLYVTDNATGANIIFHKPSIKSFDLINHDDTITQ 292 Query: 296 GIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNR 355 + + +D +Y I ++ VLF+ L IL + + +SR+N++DAMTGLYNR Sbjct: 293 YYTLHVKLDAIYVIIANIWLVLFYALITWILCRYASKQLKRQELLSRDNVTDAMTGLYNR 352 Query: 356 KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK 415 KI+TPELEQ+ + LV V IAID D LK+IND+LGH GD AI L A+ +IRK Sbjct: 353 KIITPELEQKTRTLVGRNIPVTVIAIDSDGLKRINDSLGHHMGDKAIQYLGSALGNAIRK 412 Query: 416 SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLH 475 SDY IRLGGDEFC++L+D + + + R ++ L I +K + FS G + + + DTL Sbjct: 413 SDYGIRLGGDEFCLVLIDYSLTKSRDVIARAQEYLLTIDKEKLVAFSWGAHQLHQGDTLE 472 Query: 476 DAYKASDERLYVNKQNK 492 A +DE LY +K++K Sbjct: 473 VAMLKADELLYQHKRSK 489 >UniRef50_D0YXF8 Putative two-component response regulator and GGDEF family protein YeaJ n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YXF8_LISDA Length = 517 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 120/499 (24%), Positives = 213/499 (42%), Gaps = 32/499 (6%) Query: 4 HHRMLRHFIAASVIVL-TSSFLIFELVASD--RAMSAYLRYI---VQKADSSFLYDKYQN 57 HH + + ++ V+ +S LI L+A + R + A YI ++ SS + Y+N Sbjct: 17 HHFLFKSKTWHNIFVVGINSLLIIGLIAFNLYRQIDANKNYIDSNLKLVKSSMMTLAYRN 76 Query: 58 QSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDC 117 A V + L + + + + S N G N + L G+L Sbjct: 77 DRYAQTVTKTL--KDVSIMSQPGLVSINTYPSMNE-FGFNRGIYPDNLLNGSLIGVGKPS 133 Query: 118 DTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFA 177 + I L D ++ + +YY+ RY Y ++ F Sbjct: 134 EAIYHDTNLFQILDDLWAEQHRRNITYN---------YYYISHQHRYFYLSSKYSLNDFN 184 Query: 178 MNNWSFLQSGSIGIDRKDIEKVFTGRT--VLSSIYQDQRTKQNVMSLLTPVYVA-GQLKG 234 M F + R D+++ T + + Y+D T V+++ +PV+ A + G Sbjct: 185 MTK-DFFTTDFYSQQRSDLQQESTLKKGFYFTPPYRDFFTHDMVITIKSPVFSAKDIIIG 243 Query: 235 IVLLDINKNNL-RNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDL 293 V +DI +L R I +D ++LN+ L D + I + + + +++ + Sbjct: 244 DVGVDIPVKSLMRAITLPND---FKQYLNIYLYDDIKKQTITLYDGKRSYLPWINMNRQI 300 Query: 294 PGGIRVSLSIDILYFITSSWKSVLFWILTALIL---LNMVRMHFRLYQNVSRENISDAMT 350 + + I Y + SS + + I+ + L ++++MH E +D++T Sbjct: 301 NDTLSIHAEISSWYILYSSIQDISLIIVLIIALNYMYSLLKMHKAQKNEYKIEAYTDSLT 360 Query: 351 GLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIK 410 GLYNR+I+ + LQ+ + S V FI ID + K IND GH GD+A+ +A I Sbjct: 361 GLYNRRIIKSSVMPLLQEAKDTHSPVSFIIIDANDFKIINDNYGHDVGDMALKHIANQIF 420 Query: 411 QSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR---LQHIAPQKEIGFSSGIYA 467 R SD IRLGGDEFCI+L ++T A L R+E ++ + + ++ Sbjct: 421 ALSRSSDICIRLGGDEFCIVLPNTTIGQAHSLSRRLELAVYGIKFYSQKITTTITTSCVQ 480 Query: 468 MKENDTLHDAYKASDERLY 486 +TL + + +D+ LY Sbjct: 481 YDGEETLEETFARADKILY 499 >UniRef50_Q6LT28 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LT28_PHOPR Length = 493 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 112/491 (22%), Positives = 214/491 (43%), Gaps = 28/491 (5%) Query: 15 SVIVLTSSFLIFELVASD-----RAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALA 69 S+I+L +S +I ++ + ++YL + SS L Y+N+ A ++ +LA Sbjct: 4 SLIILVNSIVILLAISINIRNEIENTTSYLESNLSIIKSSLLTLAYRNERYAKYI--SLA 61 Query: 70 AEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPA 129 + Q + N G N +K L GTL + + + P Sbjct: 62 VNNNNNQLGQSLVTVHHYPELNE-FGFNRGQYKDNLLNGTLVGIGEPSPSALTDTFIFPT 120 Query: 130 FDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSI 189 D H + + ++ ++Y+ +F P N+ F +++ + S Sbjct: 121 IDDLWAEKHHLNINYNYYYVSYLNEYFYVSSKYTSTFFKLPPNI--FETQDYN--EQRSY 176 Query: 190 GIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIF 249 K+++K F S Y D TKQ + S+ +P+Y ++ G + +D+ ++ + Sbjct: 177 YKSEKELKKGF----YFSQPYIDIVTKQKIFSIKSPIYSNDKIIGDIGVDVPLTSITSAI 232 Query: 250 YTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFI 309 L + + L + ++II+ + + + + + + +DI Y + Sbjct: 233 TLPK--ALHSSIFIYLYAMSTQQEIILRKGLHIFWPIIDVQKTIDDFLHIHAEVDIRYVL 290 Query: 310 TSSWKSVLFWILTALIL---LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL 366 S+ ++ ++ ++L + V H Q +E +D +TGLYNR++L + + Sbjct: 291 RSAAPNIALVLILIILLNYLMMRVERHKIQQQTYKKEARTDLLTGLYNRRVLLSIVVNLI 350 Query: 367 QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE 426 ++ S ++V I ID + K IND GH GD A+ ++ I R +D IRLGGDE Sbjct: 351 EQCRISYNAVSLIVIDANGFKAINDNYGHDIGDAALKHISSQIFLLSRSTDICIRLGGDE 410 Query: 427 FCIILVDSTPQIAAQLPERIEKRLQ-----HIAPQKEIGFSSGIYAMKENDTLHDAYKAS 481 FC+IL T A +L R+E + H I S ++ ++T+ +A + Sbjct: 411 FCLILPYVTQAQALKLASRLESSISITRFCHHDIYTSITTSC--TQIQADETIDNALIRA 468 Query: 482 DERLYVNKQNK 492 D++LY NK+N+ Sbjct: 469 DKQLYKNKRNR 479 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 2/167 (1%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 + +L + + R +I+D +T YNR+ T LE+ +++ ++ I +D+D K + Sbjct: 491 LTERKKLEEQLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIMLDIDHFKNV 550 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 ND GH GDL + LA IK IR++D R GG+EF I+L ++ + AA L E + ++ Sbjct: 551 NDRFGHAAGDLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAAGLAEELREQ 610 Query: 450 LQ--HIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 L I + S G+ DTL +D+ LY K + + Sbjct: 611 LSMLEIPGVGRVTASFGVTGYCPGDTLDTLLMRADQMLYTAKASGRN 657 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 5/217 (2%) Query: 283 LFQYVSYVHDLPGGIRVSLSIDILY--FITSSWKSVLFWILTALILLNMVRMHFRLYQNV 340 + + L G V S D Y + S + ++ L A+IL V + + + Sbjct: 243 FIPVFNLNNHL-MGYLVRYSKDNTYPIILKSFYTNITLSFLLAVILGFSVYIFLKDLEKF 301 Query: 341 SRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDL 400 + +D +TGLYN+ L++ +Q+ + + I D+D K+INDT GH+ GD Sbjct: 302 RYLSETDRLTGLYNKGKFNEVLQREIQRAKRYKRPLSLIIFDIDHFKKINDTYGHKVGDE 361 Query: 401 AITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIAPQKE 458 + LA+ IK++IRK+D+A R GG+EF I+ ++ + A +L E++ + ++ + Sbjct: 362 VLKALAKLIKKNIRKTDFAARWGGEEFVILAPETNVEGAKKLAEKLRQAVETYKFPTVGK 421 Query: 459 IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S G+ ++ ++ D +D LY K+ +R Sbjct: 422 VTISLGVAQLEPDEKPEDFIVRADMALYKAKEGGRNR 458 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 10/264 (3%) Query: 240 INKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLP-GGIR 298 + + H PL T R ++ + S V LP GI Sbjct: 457 VPAAPEQPSSTPHSEPLRHAVTGGEWTRFGGRRSYVLRSVVE--GTPWSVVLTLPVAGIT 514 Query: 299 VSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFR--LYQN---VSRENISDAMTGLY 353 S + I+ + + ++ ++ + + V+ R L + ++R+ +D +TGL+ Sbjct: 515 ASRLLGIIITLQLALTALFYFFGRERGVRDRVQQLLRSELQERAAALARQATTDPLTGLH 574 Query: 354 NRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSI 413 NR L Q L ++ ++G + + D+D K++ND GH GD + L+Q + Sbjct: 575 NRLRFNEGLAQELARVRRTGQPLSLVMFDVDHFKEVNDRYGHPTGDQVLIRLSQTAAAQL 634 Query: 414 RKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKEN 471 R++D R GG+EF I+LVD+ A ++ E + + + + S G+ + + Sbjct: 635 RQTDLLARWGGEEFAILLVDADLHAAVEVAENLRRLVARTPFDQIGSVTASFGVAECRPD 694 Query: 472 DTLHDAYKASDERLYVNKQNKNSR 495 ++ + +D LY K N +R Sbjct: 695 ESADSLLERADAALYRAKSNGRNR 718 >UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilus RepID=Q5SHT9_THET8 Length = 360 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 5/193 (2%) Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRLYQ---NVSRENISDAMTGLYNRKILTPELEQ 364 F W ++ + L + ++ + RL + + +D +TGL NR+ L LE+ Sbjct: 162 FQPVHWNALTQFFGANLAYVGLLYLLVRLKEGYMEAQLDAYTDFLTGLRNRRYLELILER 221 Query: 365 RLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGG 424 L +L + G + + +D+D K +ND GH+ GD + LAQ I+ +R+SD A+RLGG Sbjct: 222 ELFRLQRYGRPLSLVLLDLDGFKAVNDLHGHEVGDRVLQALAQRIEAHLRRSDRAVRLGG 281 Query: 425 DEFCIILVDSTPQIAAQLPERIEKRLQHIA--PQKEIGFSSGIYAMKENDTLHDAYKASD 482 +EF ++L ++ A +L ER+ + ++ +A P I S G+ + DT + +D Sbjct: 282 EEFALLLPETPLPQALRLAERLRRAVEAMAVPPVARITASFGVAEARPTDTPLTLLRRAD 341 Query: 483 ERLYVNKQNKNSR 495 E +Y K+ +R Sbjct: 342 EAMYRAKRKGKNR 354 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 20/229 (8%) Query: 284 FQYVSYVHDLPGGIRVSLSIDILYFITSSWKS------------VLFWILTALILLNMVR 331 + S V DLP + V + +D +T+ W++ L + A+ L + Sbjct: 268 YYVFSRVGDLPLIVVVGVGMDA---VTAPWQAQWLAGAATSVVLCLLILGAAVALRREML 324 Query: 332 MHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIND 391 F + Q R + +D++TGL NR+ ++ Q+ + SS+ + +D+D KQ+ND Sbjct: 325 RRFEIEQEFLRLSQTDSLTGLPNRRHFDEFGQREWQRAARQRSSIAVLMVDIDHFKQVND 384 Query: 392 TLGHQEGDLAITLLAQAIKQSI-RKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 +GH GD + ++ I+ S+ R D+A R GG+EF IIL ++ AA + ERI + Sbjct: 385 RIGHPGGDRVLREVSDIIRASLHRPGDFAGRYGGEEFAIILPETDAPAAAHVAERIRAAI 444 Query: 451 QHIAPQK--EIGFSSGIYA--MKENDTLHDAYKASDERLYVNKQNKNSR 495 + + + S G+ A TL + A+D LY K+ +R Sbjct: 445 EANTAEGVAPVTVSIGLAAGLAAPKGTLAEMMIAADHALYRAKETGRNR 493 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats. Identities = 58/180 (32%), Positives = 98/180 (54%), Gaps = 8/180 (4%) Query: 325 ILLNMVRMHFRLYQNV---SRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 +LL VR R + + + +D +TGLYNR+ + ++ L+++ ++ + FI + Sbjct: 111 VLLARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQRELERVQRNETDASFIIL 170 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K++ND GH GD + LA+ K++ RK D R GG+EF I L D+ + A Sbjct: 171 DIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKVDLCCRFGGEEFVICLPDTDTEGALL 230 Query: 442 LPERIEKRLQHIAPQKE-----IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + ER K+++ ++ E + S G+ + EN TL D K +D+ LY KQN +R+ Sbjct: 231 VAERTRKKVEELSFNTEKGPLHVTISLGVSSANENTTLEDMLKRADDALYQAKQNGRNRT 290 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 + + ++ RL + +++I D +TGLYNR+ L + L ++ + + + ID+D Sbjct: 366 VALSLVNLRLRATLRQQSIRDPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHF 425 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 KQ NDT GH GD + LA +++ R D R GG+EF ++L + A E + Sbjct: 426 KQHNDTYGHALGDTLLRRLATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEAL 485 Query: 447 EKRLQHIAPQKE------IGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 + ++++A + S G + ++ T D +D LY K +R Sbjct: 486 RRSVENLAVTSNDAEFVALTISIGGASWPDHATTPEDLLARADAALYRAKHRGRNR 541 >UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AX52_RUBXD Length = 378 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 3/205 (1%) Query: 295 GGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFR-LYQNVSRENISDAMTGLY 353 G R++L S++ + + ++ A + R L + + R +D +TG+ Sbjct: 170 SGHRITLDQTAWIAQQSAFLAAVIALVYATSYVKSQLARQRTLAEAMHRLAHTDPLTGIS 229 Query: 354 NRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSI 413 NR+ L L + ++ + G + I D+D+ K +NDT GH +GD A+ +A + ++ Sbjct: 230 NRRSLYAALRREMEAARRYGKPLSVILFDLDRFKLLNDTYGHNQGDAALRRVAHTARAAL 289 Query: 414 RKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP--QKEIGFSSGIYAMKEN 471 R SD+ R GG+EF ++ ++ A L ER+ + + P + + S G+ + + + Sbjct: 290 RASDHLGRWGGEEFIVLAPETDLDQARHLAERLREAIALDRPPGRPPLTASFGVASCRPD 349 Query: 472 DTLHDAYKASDERLYVNKQNKNSRS 496 D+ D + +DE LY K +R+ Sbjct: 350 DSPEDLLRRADEGLYRAKAGGRNRA 374 >UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRM0_AZOC5 Length = 514 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 9/211 (4%) Query: 290 VHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAM 349 + D+ R + + +T + S+ AL+L + + RL + + +++D + Sbjct: 280 IRDIFLPWRYRVLVGTAAVLTVGFASIAI----ALVLRHDLMRRSRLQAELLQLSLTDDL 335 Query: 350 TGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAI 409 TG+ NR+ + Q+ + GS V + ID+D+ K +ND LGH GD + +AQ I Sbjct: 336 TGIANRRRFFDVAIREWQRAQRLGSPVAVLMIDIDRFKLLNDRLGHAAGDAVLQAIAQLI 395 Query: 410 KQSIRK-SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--IAPQKEIGFSSGIY 466 + S+R+ +D A R GG+EF IL D+ A Q ERI +++ I + S GI Sbjct: 396 RHSLRRPADLAARYGGEEFTAILPDTDMAGAFQTAERIRTQVERDVIRGDHPVTVSIGIA 455 Query: 467 A--MKENDTLHDAYKASDERLYVNKQNKNSR 495 A N+T + A+D LY K++ +R Sbjct: 456 AAIASPNETFENVVAAADRALYRAKESGRNR 486 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 5/175 (2%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 ++ H + + + +D +TGL NR+ LE +Q+ + G+ + I+ID+D+ Sbjct: 532 IITDTTEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDR 591 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K++NDT GH GD + LA + +R D R+GG+EF ++L D+ P+ A + ER Sbjct: 592 FKRVNDTWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAER 651 Query: 446 IEKRLQH-----IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + ++ A + S G+ A D + +D LY K +R Sbjct: 652 LRAGVEAAPLLTTAGPLTVTLSLGVSASPPCDGADTLLREADRALYRAKAGGRNR 706 >UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUF5_9AQUI Length = 283 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 51/162 (31%), Positives = 94/162 (58%), Gaps = 1/162 (0%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 L + + +D++TG YNR+ + L + +++ + G+ + + ID+D K++NDT GH Sbjct: 119 LIRELRFLADTDSLTGFYNRRKIEEILAKEIERSRRYGNPLSVLFIDVDNFKELNDTYGH 178 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ-HIA 454 + GD + +A+ IK +R++DY R GG+EF +IL ++ Q A ++ ERI KR++ Sbjct: 179 KSGDEVLRKIAEIIKSELRRTDYVGRFGGEEFMVILPETDSQSALRVAERIRKRVEREDF 238 Query: 455 PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 ++ S G+ +KE D L+ + D +Y+ K+ +RS Sbjct: 239 KTGKVTVSVGVTELKEGDDLNTLFNRVDRAMYLAKERGKNRS 280 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 7/182 (3%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 LT L + + +L + +S+++I DA+TGL+NR+ + LE+ + + + + I Sbjct: 1154 LTVAEHLALSLANLKLRETLSQQSIRDALTGLFNRRYMEESLEREIHRAQRHQRPMGIIM 1213 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 +D+D K NDT GH+ GD + L +++SIR SD A R GG+E +IL D++ Sbjct: 1214 LDIDHFKHFNDTFGHEAGDAVLRELGIFLQRSIRASDIACRYGGEELMLILPDASLADTK 1273 Query: 441 QLPERIEKRLQHIAPQKE------IGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKN 493 Q E+I ++ + + I S G+ A E+ T + A+D LY K Sbjct: 1274 QRAEQIRHDVKGLQIEYHHKLLDAIAISVGVAAFAEHGSTAQELIAAADRALYQAKAQGR 1333 Query: 494 SR 495 R Sbjct: 1334 DR 1335 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 2/174 (1%) Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 + + + + L + + D +T NR L+Q ++ + + +D+ Sbjct: 612 IAMFHDITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLLLDI 671 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 D K+INDT GH+ GD + L A+K +R++D R GG+EF ++L + + + Sbjct: 672 DHFKRINDTFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERGQHVA 731 Query: 444 ERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 E++ +++ A + S G+ + +++ D K +DE +YV K+ +R Sbjct: 732 EQLREQVTATAFPCVGLVTISLGVAECRPGESIRDWVKRADEAMYVAKKGGRNR 785 >UniRef50_Q3A5K1 Two component signal transduction response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5K1_PELCD Length = 323 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 2/170 (1%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 + + ++R ++D++TGLYNR + Q + + + G + + +D+D K Sbjct: 127 ERIHALHQAQSQLARIALTDSLTGLYNRAYFDATITQEVARCSRRGLPLSLLMVDLDHFK 186 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 +INDT GH GD A+ +A +K+ R SD R GG+EF +IL ++T AA + ERI Sbjct: 187 KINDTYGHLAGDQALAAVALVLKEQSRISDTVCRFGGEEFAVILPETTNANAATVAERIR 246 Query: 448 KRLQHIAPQKEIGFSSGIYAMKENDTL--HDAYKASDERLYVNKQNKNSR 495 K++ + + S G+ + K + L +D LY K +R Sbjct: 247 KKISQLDLAFPVTASIGVGSAKVTNQLLPDHLIAEADGALYEAKSQGRNR 296 >UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=C4RZH3_YERBE Length = 431 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 131/311 (42%), Gaps = 11/311 (3%) Query: 189 IGIDRKDIEKVFTGRTVLSSIYQDQ--RTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLR 246 + I + + G+ +D+ +Q + P+ + L+ ++D N+ R Sbjct: 124 LYIAENVLTQPNMGQLCSKPYRRDEQGFYEQLFNTNTAPMLLIDPLREGQIVDANQAATR 183 Query: 247 NIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDIL 306 Y+ D + + D + + ++++H L G + Sbjct: 184 FYGYSRDEMCMKHTWEINTMGRDVLPVMNEVARLPGGHKPLNFIHKLADG-------NTR 236 Query: 307 YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL 366 + T + L + L +++ + RL Q + + D +T L NR+ P +E Sbjct: 237 HVQTYAGPVELDGVRLMLCIIHDITEQKRLEQALEHAALRDPLTDLGNRRQFFPLVEHAH 296 Query: 367 QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE 426 + + G I +D+D K IND LGH +GD + LLA+ ++ IR+SD R GG+E Sbjct: 297 AQSQRYGHCFSLILLDVDHFKSINDQLGHNKGDEVLILLARTLESIIRESDSVFRWGGEE 356 Query: 427 FCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDER 484 F I+L + + A QL E I + +Q I ++ S G+ + + +K DE Sbjct: 357 FTILLPLTHLEGALQLAESIRETIQMICQPNLPQLTVSIGVAQHQSGEDTDSLFKRMDEA 416 Query: 485 LYVNKQNKNSR 495 LY K + +R Sbjct: 417 LYRAKASGRNR 427 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 9/180 (5%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 ++ + + + + ++D +TGLYNR+ L++ Q+ + G + + +D D Sbjct: 162 IVTLCLENVLNRERLKWLGLTDPLTGLYNRRYFEQRLQEEAQRTRRHGDPLACLMLDADH 221 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K+INDT GHQ GD+ + +LA+ ++Q +R D A R+GG+EF ++L + + + ER Sbjct: 222 FKRINDTWGHQAGDVVLKVLARRVRQQLRGCDVAARIGGEEFAVLLPSTPVRHVQLVAER 281 Query: 446 IEKRLQ----HIAPQ--KEIGFSSGIYAMKEND---TLHDAYKASDERLYVNKQNKNSRS 496 I + H++P ++ S G + + +D LY K+N +R+ Sbjct: 282 IRLAIAGEPVHVSPDCVLQVSVSLGAAMLAPGAADISPERLMARADAALYQAKRNGRNRT 341 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 2/174 (1%) Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 A+ ++ + R + + R++I+D +T +YNR+ LEQ ++++ ++ I D Sbjct: 514 AIGIIRDISERKRFEELLYRQSITDPLTNIYNRRFFMQMLEQEIERVKRNKKLFSLIMFD 573 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K +ND GH GD+ + +A +K IRK+DY R GG+EF I+L +++ AA+L Sbjct: 574 LDHFKNVNDRFGHAAGDMVLKSVADTVKGRIRKTDYFARWGGEEFIILLPETSLNNAAEL 633 Query: 443 PERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 E + K++ ++ S G+ + DT+ D LY K + + Sbjct: 634 AEELRKKISETELDGIGKVTASFGVTEYRNTDTVDTVLLRVDGALYEAKGSGRN 687 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 7/175 (4%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 + ++ RL +++ +++I D +TGLYNR+ L E+ L + +S + I +D+D K Sbjct: 450 ALAIVNLRLRESLRQQSIRDPLTGLYNRRYLEESFERELHRAQRSDDPIAVIMLDIDHFK 509 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 ND+ GH+ GD + L Q + IR D A R GG+EF ++ T A + +++ Sbjct: 510 HFNDSHGHEAGDELLRALGQLLSGCIRAEDVACRYGGEEFAMVFPGMTLDQATRWADQLR 569 Query: 448 KRLQHIAPQ------KEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ++ +++ S G+ A ++ L D +A+D LY K+ +R Sbjct: 570 HTVESTQFASRGEALEQVSVSLGVAAFPQHGRHLADLIRAADAALYRAKREGRNR 624 >UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas RepID=Q2P4J7_XANOM Length = 569 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L++ + RL +++ R++I DA+TGLYNR+ L L L + + G + + +D+D Sbjct: 382 LSLALSNLRLRESLRRQSIRDALTGLYNRRYLEESLSHELARCARRGLPLSVLMLDVDHF 441 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 KQ ND+ GH GDL + + + + +R D A R GG+EF ++L ++ + A ++ E+I Sbjct: 442 KQFNDSQGHAGGDLLLAAVGELLLTRLRTEDVACRYGGEEFTVLLPEADGEEALRVAEQI 501 Query: 447 EKRLQHIAPQKE------IGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNSR 495 + +A E + S G+ + + + + +D LY K +R Sbjct: 502 RGYIAALAVSDEARALPKVTASIGVASFPADGEQGASLIQKADAALYRAKHRGRNR 557 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 17/242 (7%) Query: 271 GRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSID-----ILYFITSSWKSVLFWIL---- 321 GR + Q + LF LP I L F+ + +L I Sbjct: 517 GRSHGVKQGQHALFCNHVNDQHLPLASLCIPLIAQGETLGLLFLCTFKGEILPDIRQQLA 576 Query: 322 -TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 T L + + +L + + +++ D +T L+NR+ L L Q L + + SV + Sbjct: 577 KTVAEQLALAIANLKLREQLEEQSLRDPLTKLFNRRYLEQRLSQELARAKRHHYSVGVLM 636 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 ID+D K+ ND+LGH GD + + +K +IR SD A R GG+E IIL D+T + A+ Sbjct: 637 IDVDHFKRFNDSLGHDAGDRILASIGTLLKNNIRTSDVACRYGGEEITIILPDATLEEAS 696 Query: 441 QLPERIEKRLQHIAPQ------KEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKN 493 Q E + + + + + + S G+ + +T + + +D+ LY KQ Sbjct: 697 QKAEFLRQAIAEMKIEYSGKIVNSVTASFGVACYPDHGETGQEIIQIADKALYDAKQAGR 756 Query: 494 SR 495 +R Sbjct: 757 NR 758 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 2/168 (1%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 + R+ + + + D +T LYNR+ L L L + + G + + +D+D K+I Sbjct: 319 ITERTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDIDHFKRI 378 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 NDT GH GDL +T +A+ I +R +D R GG+EF I ++ AA L E+I Sbjct: 379 NDTFGHDSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAEKIRSS 438 Query: 450 LQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + + S GI ++ D ++ K +D LY K+ +R Sbjct: 439 IAMFSFPTVGAVTISVGISLLESKDDINALIKRADTALYAAKEMGRNR 486 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 52/174 (29%), Positives = 94/174 (54%), Gaps = 4/174 (2%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +++ + +L + + ++NI DA+TGLYNR+ L L++ L++ + S+ I ID+D Sbjct: 307 HISLALANIKLCETLKQQNIRDALTGLYNRRYLEESLKKELERAKRKERSLGIIMIDVDH 366 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K +NDT GH +GD + L +++ IR SD A R GG+E +IL +++ + Q E+ Sbjct: 367 FKNVNDTFGHDKGDQVLKKLGGFLQRHIRGSDIACRYGGEELTLILPEASLENTRQRAEQ 426 Query: 446 IEKRLQHIAP---QKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + + ++++ + S GI E+ + K +D+ LY KQ R Sbjct: 427 LRQAVKNLDLDLCDHTLTISVGIACFPEHGYSGKALLKTADQALYQAKQQGRDR 480 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 7/182 (3%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 + +A+ L + + L++ + + D +T L+NR+ L + L + + + + Sbjct: 327 LHSAMRHLALAVKNALLFREMRLQADHDGLTQLHNRRHFDTRLREELDRHGRYSMPLTLM 386 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 +D+D KQIND GHQ GD + LA ++++IR +DY R GG+EF IL + Q A Sbjct: 387 MLDIDYFKQINDRFGHQAGDAVLRELASVLRETIRTTDYCARYGGEEFVAILPHTDEQQA 446 Query: 440 AQLPERIEKRLQ-----HIAPQKEIGFSSGIYAMKEN--DTLHDAYKASDERLYVNKQNK 492 L ER+ K ++ H + S G+ K + + +D LY+ K N Sbjct: 447 RVLAERLRKNIESRVFRHHGKTIQATVSIGLTGFKPGALTPRDELVREADAALYLAKANG 506 Query: 493 NS 494 + Sbjct: 507 RN 508 >UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4USH9_XANC8 Length = 578 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L++ + RL +++ R++I DA+TGLYNR+ L L L + + + + +D+D Sbjct: 382 LSLALSNLRLRESLRRQSIRDALTGLYNRRYLEEALSHELARCARRDLPLSVLMLDVDHF 441 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 KQ ND GH GDL + + + + +R D A R GG+EF +IL ++ + A ++ E+I Sbjct: 442 KQFNDGQGHAGGDLLLAAVGELLLTRLRAEDVACRYGGEEFTVILPETDGEEAMRVAEQI 501 Query: 447 EKRLQHIAPQ------KEIGFSSGIYAMKENDTLHD-AYKASDERLYVNKQNKNSR 495 + +A + S G+ + + L + +D LYV K+ +R Sbjct: 502 RGHIAALAVSDGQRALPRVTASIGVASFPADGELGSALIQKADAALYVAKRQGRNR 557 >UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLF8_MEIRU Length = 373 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 1/179 (0%) Query: 318 FWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVM 377 F + L LL M R Y + + +DA+T L NR+ + +LE L + + Sbjct: 174 FSNIAYLALLYMFAYLRRHYAQMHQMAHTDALTNLTNRRAMQQKLEGELDRARRYNRPFA 233 Query: 378 FIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQ 437 + D+D KQINDT GH GD + +A + Q +R+SD R GG+EF I+ ++ Q Sbjct: 234 LLLADLDHFKQINDTYGHSVGDQVLREVAGRLAQHLRESDSLARWGGEEFLILAPETDLQ 293 Query: 438 IAAQLPERIEKRLQHIAPQK-EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 A L +R+ ++ ++ S G+ ++ D++ +DE +Y K ++ Sbjct: 294 QAYLLAQRLLGAIRESPISGVQVTLSLGVACYRQGDSIAALLSRADEAMYRAKAGGRNQ 352 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 7/199 (3%) Query: 304 DILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELE 363 + + I S + L + + +R + V + + +D +T + NR+ L L Sbjct: 182 NATWLILLLGLSTPYIGLLVAMNSSAIRRWRQRESEVRQLSTTDPLTQVANRRHLLERLN 241 Query: 364 QRLQKLVQSGSS-VMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRL 422 + + +SG S + + +D+D K IND GH GD A+ + A+ +++ R +D R Sbjct: 242 LEISRCERSGHSELSLLMMDLDHFKSINDEHGHLFGDEALRVTARVLREQSRNTDLVGRY 301 Query: 423 GGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE------IGFSSGIYAMKENDTLHD 476 GG+EFC++L D+ PQ A Q+ ER + L+ +E I S G+ + DT Sbjct: 302 GGEEFCLLLPDTGPQGALQIAERCRQALEQADIDREDGEVLHITTSIGLATYQMGDTNES 361 Query: 477 AYKASDERLYVNKQNKNSR 495 +DE LY K+ +R Sbjct: 362 LLHRADEALYQAKEQGRNR 380 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 7/181 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 T + L + + +L + +++ DA+TGL+NR+ L LEQ + + ++ SV + I Sbjct: 1064 TVVEHLAIALANVKLQEKFKAQSMRDALTGLFNRRYLEESLEQEIHRARRNHYSVGIVMI 1123 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K+ ND GH GD + +A+ ++ SIR SD A R GG+E +IL +++ Sbjct: 1124 DIDHFKRFNDQFGHDAGDEVLKTVARLLQGSIRSSDIACRYGGEELTLILPEASLSDTQA 1183 Query: 442 LPERIEKRLQHIAPQ------KEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNS 494 E+I ++H+ I S G+ E +TL + +D LY K + Sbjct: 1184 RSEQIRYMIEHLQLHYENQSLGSITASFGVACFPEHGETLEAVLRIADTALYQAKALGRN 1243 Query: 495 R 495 R Sbjct: 1244 R 1244 >UniRef50_A1HS81 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS81_9FIRM Length = 553 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 3/211 (1%) Query: 286 YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENI 345 + L ++ ++ I +W + L V + ++ + + + ++ Sbjct: 335 FCRGDEALDKNAPINSEVEFAGGIWDTWW-IPLGEDIYLHYATDVTRYKKMEEELRQLSV 393 Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D++T +YNR+ +LE+ +++ ++GS + +D+D+ K IND GH GDL + + Sbjct: 394 TDSLTNVYNRRYFVQKLEEEIERAKRAGSKFSLVMLDIDRFKSINDRFGHNAGDLVLKSM 453 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--IAPQKEIGFSS 463 A+ IK IRK D R GG+EF ++L ++T A L E + + L I + S Sbjct: 454 AEMIKNRIRKIDTLARWGGEEFVMLLPETTVNKAVVLVEELRESLSQMDIPGVGRVTASF 513 Query: 464 GIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 G+ DT+ + D +Y K + Sbjct: 514 GVVGYCPGDTIDTLMQRVDALMYEAKAAGRN 544 >UniRef50_B6ESW5 Membrane associated GGDEF protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ESW5_ALISL Length = 413 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 83/351 (23%), Positives = 167/351 (47%), Gaps = 39/351 (11%) Query: 156 YYLDLNDRYVYFYEPVN--VEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQ 213 YY ND +++ PV+ ++F+ + ++ S+ E R ++S+IY Sbjct: 86 YYRSYNDEFLFTTRPVDDYKKFFSKDACEVQKTCSLFSS----EFSLKDRILVSNIYDSY 141 Query: 214 RTK-QNVMSLLTPVYVAGQLKGIVLLDINKNN----LRNIFYTHDRPLLWRFLNVTLTDT 268 + ++V+S+ +PVY G + G +D+N + +NI Y D+ L Sbjct: 142 FDESKSVISISSPVYFLGNVIGDYNMDVNIASDFLLNKNIKYMVDKNL------------ 189 Query: 269 DSGRDIIINQSEDNLFQYVSYV--HDLPGGIRVSLSIDILYFITSSWKSVLFWILTALIL 326 + II + ++ F+ SY + + + +I + F +W ++ + + Sbjct: 190 ---KKIITLEQKNIFFRNFSYSIERTISNNLVIKYNIPMYIFFKDTWFIFFLFVFISYLF 246 Query: 327 L---NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 L + + +S ++ D +T + NR +L ++++ + I+ID Sbjct: 247 LVKNIKISNSKKELSEMSEKSNMDELTKISNRTLL-----SKIKEKNDMDDCLSVISIDG 301 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 + +K+IND+ GH GD AI +A +++ R++DY R+GGDEF +IL++ A +L Sbjct: 302 NNIKKINDSFGHHIGDEAIKHIASSMQFVFRENDYLFRIGGDEFLVILMNCPLDKAQELG 361 Query: 444 ERIEKRLQH---IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 ++++ ++ I I S+GI +N T+ +A K +D +LY +K+N Sbjct: 362 YKLKENTKNKPFIINDLSITISTGIVNKDKNMTIDEALKLADVQLYKDKRN 412 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 + + + +L + + +I D +TGL+NR+ L LE+ + + ++ +V I ID+D Sbjct: 824 MALAIANLQLREELQNRSIRDPLTGLFNRRYLEESLEREINRACRNDHNVGVIMIDIDHF 883 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K+ NDT GH GD + + + +K S+R SD A R GG+E +IL +++ + + E++ Sbjct: 884 KRFNDTFGHDGGDAVLKEVGKLLKSSLRASDIACRYGGEEMTLILPEASIENTYKRAEQV 943 Query: 447 EKRLQHIAPQKE------IGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 K ++ I + + I S G+ E+ T + +D LY K+ R Sbjct: 944 RKLIKQINIEHKRQSLGTITASLGVACFPEHGMTGDAVVQRADTALYQAKKEGRDR 999 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 13/265 (4%) Query: 237 LLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGG 296 LD+N+ R + YT L + + I + + H G Sbjct: 715 FLDVNEVACRRLGYTRRELLAMTPRELDAEEFAEQVGERIRRLREEGSLTFESAHRTRNG 774 Query: 297 IRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRK 356 + + I V L + + RL Q + RE +D +TG+ NR+ Sbjct: 775 TVLPVEIHAKLLDFDGKPVV-------LSIARDITDRKRLEQALMREATTDPLTGIRNRR 827 Query: 357 ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS 416 + E+ + + V+ G + + +D+D+ K++ND GH GD + QA +Q++R++ Sbjct: 828 QFFVDAEREMGRAVRYGRPLAVLMLDLDRFKRVNDRFGHHAGDAVLMGCVQACQQALRET 887 Query: 417 DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI-----APQKEIGFSSGIYAMKEN 471 D RLGG+EF +L+++ A ER+ + ++ + + S G+ Sbjct: 888 DILGRLGGEEFAAVLLETDLDDALAAAERLRRAVEEMDVPFSGQRLRCTVSIGLALRGPG 947 Query: 472 D-TLHDAYKASDERLYVNKQNKNSR 495 D L D + +D LY K+ +R Sbjct: 948 DGALDDILRRADSALYAAKEAGRNR 972 >UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UB95_XANAL Length = 595 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 12/234 (5%) Query: 269 DSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLN 328 D+I + ++ V + + LS L + L + L Sbjct: 348 AQTSDVICDPAQALYGACVPMIVQGERLGMIHLSSPNLAVLER-----LNLVEVVAEQLA 402 Query: 329 MVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQ 388 M + L + ++I D +TGLYNR+ L L + L + + + + +D+D K Sbjct: 403 MALHNLHLRHRLRTQSIRDPLTGLYNRRYLEESLLRELSRCARRDLPLALMMLDLDHFKA 462 Query: 389 INDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 +ND GH GD + Q + +R D A R GG+EF +IL + +A + E+I Sbjct: 463 LNDRFGHAGGDALLAAFGQLLGGLVRPEDIACRYGGEEFTVILPGAAADVAQRRAEQIRA 522 Query: 449 RLQHIAPQK------EIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ++ + Q I S G+ A E+ T + + +D LY K++ +R Sbjct: 523 AVEQMQVQHHGQMLPSITVSIGVAAYPEHGSTGEELLRCADAALYCGKRSGRNR 576 >UniRef50_C8R031 Diguanylate cyclase with GAF sensor n=2 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R031_9DELT Length = 493 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 8/177 (4%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L + RL++NV +E + D +TG+YNR+ E+ L K + +S+ + ID+D Sbjct: 181 LAVALERARLFENVRKEAMHDGLTGIYNRRFFLECAERELHKCQRGSNSLSLLFIDIDHF 240 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K +ND GH GD + LA+ ++ IR+SD R GG+EF ++L D+ + A L E++ Sbjct: 241 KDVNDNFGHVFGDQVLRQLAKILQCGIRQSDIPARYGGEEFVVLLPDTNGEAACCLAEKL 300 Query: 447 EKRLQH-------IAPQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ++ K I + G+ + E+ T+ D + +D RLY K+ +R Sbjct: 301 RSKVAEDLVATPPHEQPKTINLTVGVASYPEDGKTVIDLLRVADRRLYKGKEEGRNR 357 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 7/174 (4%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 + R +++ +D +TGLYNR+ L+ +++ + S+ I++D+D K I Sbjct: 402 ITERKRAEEHLRYLATTDELTGLYNRRHFMEILDTEIERAKRYEQSLALISLDIDHFKTI 461 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 NDT GH GD A+ LA + R+ D RLGG+EF +I + A +L ERI Sbjct: 462 NDTHGHAVGDAALEHLAAQLLACKRQPDSLGRLGGEEFALIAPHTDRAGATELAERIRSE 521 Query: 450 LQHIAPQKE-----IGFSSGIYAM--KENDTLHDAYKASDERLYVNKQNKNSRS 496 L+ + E S G+ A+ ++NDT+ K +D+ LY K+ +R+ Sbjct: 522 LERTPIELESTSLHPTISLGVTALNIQDNDTIDALLKRADDALYEAKRTGRNRT 575 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 5/181 (2%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 I + +++ V Q + N DA+TG+YNR+ L L++ + + + Sbjct: 117 ITSLFLIVQDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPFSLM 176 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 ID+D K++NDT GHQ GDL + +A IRKSD+ R GG+EFC +L ++ A Sbjct: 177 MIDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDCDAA 236 Query: 440 AQLPERIEKRLQHI-----APQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 + E + ++++ + S GI +D+ K +DE LY K++ + Sbjct: 237 ETVAEHLRAHIENMEHLFQKKVIRVTISLGIACFAPDDSPETLVKRADEALYQAKRSGRN 296 Query: 495 R 495 R Sbjct: 297 R 297 >UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=2 Tax=Desulfovibrio RepID=B8DIR5_DESVM Length = 474 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 4/201 (1%) Query: 297 IRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRK 356 + ++ Y++ + F +L ++L R+ R+ + R +D +T L NR Sbjct: 272 VPITAQTSADYWLVARVAG-FFALLVGVVLWYNRRLK-RMNAVLERLARTDPLTDLPNRS 329 Query: 357 ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS 416 L + +++ + + +D+D K++ND LGH GD + + A ++ S+R + Sbjct: 330 RLNELFRREVERAQRYRRPFSIVILDIDHFKRVNDELGHLAGDRTLQVFAGVVRDSVRGT 389 Query: 417 DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-KEI-GFSSGIYAMKENDTL 474 D R GG+EF ++ ++T + A QL ER+ L+ + I S+G+ A +E D++ Sbjct: 390 DTVGRWGGEEFLVLCPETTAEEAVQLAERLRGSLRATQFEGGRIHTLSAGVAAFREGDSV 449 Query: 475 HDAYKASDERLYVNKQNKNSR 495 +D LY K R Sbjct: 450 DTLLHRADTALYRAKNGGRDR 470 >UniRef50_Q7P0N5 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0N5_CHRVO Length = 400 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 24/264 (9%) Query: 247 NIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDIL 306 N F DR ++ + + D +++ + Q +++ + VS+++D++ Sbjct: 129 NAFMERDRDIIAMYRSGDAAQRDKASKLVMGEE----IQIFTHISQNTNALAVSITLDLM 184 Query: 307 --------YFITSSWKSVLFWILTALILLNMVRMHFR-------LYQNVSRENISDAMTG 351 Y I + W ++ WI+ + + + +VR+ + L Q + +D +T Sbjct: 185 KKVAQSNSYGIVARWIMLVMWIIASAMAILLVRLLHKWLGQMRSLMQKLEALAGTDELTQ 244 Query: 352 LYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQ 411 L NR+ ++E L + + D+D KQ ND+ GH EGD + +A IK Sbjct: 245 LPNRRTWDIQIEMMLATARRYRQPIAVALFDLDHFKQFNDSYGHPEGDRLLREVAVLIKS 304 Query: 412 SIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKEN 471 +R+SD R GG+EF + L+D AA E + L P ++ FS G+ E Sbjct: 305 RMRQSDLFARFGGEEFVLALMDCNLDQAAARIESLRGNL----PDQQ-TFSVGVTVWLEG 359 Query: 472 DTLHDAYKASDERLYVNKQNKNSR 495 + +H +D+ LY+ K R Sbjct: 360 ERIHSTLARADKALYLAKNGGRDR 383 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 5/181 (2%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 I I + V + + D +TG++NR+ L L++ L++ + G+ + + Sbjct: 115 ISAIYITVQDVTDFVIYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIM 174 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 +D+D K+INDT GH GD + +++ + + +R SD R GG+EFC IL +++ + A Sbjct: 175 MLDIDHFKEINDTHGHICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQA 234 Query: 440 AQLPERIEKRLQHIAP-----QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 L ER ++ Q + S G+ + +DTL K +D+ LY K+ + Sbjct: 235 LVLAERCRTQVAASQFSCTDHQSRVTVSIGVTDLHRDDTLDSIIKRADDALYQAKRTGRN 294 Query: 495 R 495 R Sbjct: 295 R 295 >UniRef50_C9R8E3 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R8E3_AMMDK Length = 414 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 7/211 (3%) Query: 293 LPGGIRVSLSIDILYFITSSWKSVLFWILTALI-----LLNMVRMHFRLYQNVSRENISD 347 +P L++ L+F+ S F AL L ++ LY+ V D Sbjct: 195 IPLEYDAGLALGYLFFLRRSPAPAFFLRRAALRENLGRLGAAALVNSYLYREVKELAERD 254 Query: 348 AMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQ 407 +TGLYNR+ + L++ + + + +D+D K NDT GH GD + + + Sbjct: 255 GLTGLYNRRKFWEIFLKELERAKRYRRKLAILLLDVDNFKDYNDTFGHLAGDECLRRIGE 314 Query: 408 AIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEI-GFSSGIY 466 I + IR SD A R GG+EF I+LV++ + A + ER+ R++ I ++ S G+ Sbjct: 315 VIGKEIRASDTAARYGGEEFVILLVETGGEGAVAVAERLRHRVEDIGKREPFPTISLGVA 374 Query: 467 AMKEN-DTLHDAYKASDERLYVNKQNKNSRS 496 E+ + +D LY K++ +R+ Sbjct: 375 VFPEDAQSAEALLTCADNALYTAKRSGKNRT 405 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 2/168 (1%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 + R+ + + R +DA+TGL NR LE+ ++ + G ++ + D+D K + Sbjct: 246 ITERVRMEEELKRAATTDALTGLANRLSFEQLLERDYERCRRYGGALSLLMFDLDHFKAV 305 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 ND GH+ GD + LA + ++R +D R GG+EF ++L ++ A +L E++ +R Sbjct: 306 NDAHGHEAGDAVLQALAGLVLANVRTADTVARWGGEEFMVLLPETPLAAAGELAEKLRER 365 Query: 450 LQ--HIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + S G+ A++++DT + +DE LY K R Sbjct: 366 VAAHRFPHGAPVTASFGVCALRDDDTCRTLVRRADEALYRAKHLGRDR 413 >UniRef50_Q04NQ1 GGDEF family protein n=7 Tax=Leptospira RepID=Q04NQ1_LEPBJ Length = 535 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 93/518 (17%), Positives = 202/518 (38%), Gaps = 35/518 (6%) Query: 1 MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSI 60 +K+ R+L + A + VL FLI+E + + + + + Q +++ Sbjct: 14 VKIKKRILFSLL-AIIFVLLLFFLIYENLRMKKEIDRVVGMRTRVMKDYIRRVGSQTRAL 72 Query: 61 AAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTI 120 + L + + + + + N + G T ++ Sbjct: 73 GLSISDYLTFYEDTFANPSLVKKFKNYPNINR---FGIPHISRENKEGADSGTLTAIGSV 129 Query: 121 VEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN 180 + L + + + S E Y +++Y E + + Sbjct: 130 YKLNPSL--LKEIEAALNLRGQFESLTEKQSEVVWAYYLSKQKFLYITPKFKDENYYFTD 187 Query: 181 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI 240 +L + + TGR +++ +Y D K ++++ PVYV + G+ +DI Sbjct: 188 DLYL---GPYWTQATPQINPTGRQIITDLYDDLAGKGLMITISEPVYVNEKFIGVASIDI 244 Query: 241 NKNNLRNIFYTHD---RPLLWRFLNVTLTDTDSGR----------DIIINQSEDNLFQ-- 285 + ++ I + D +L + + + + +I+ + + Sbjct: 245 GLDAMQRILESGDCIGESMLIDENGKIIAKSGTFKLDTRLPLPVITMIMEPQDLFFLEKG 304 Query: 286 -YVSYVHDLPGGIRVSLSIDILYFITSSWKSVL-FWILTA---LILLNMVRMHFRLYQNV 340 + I + I I +I K++L FW+L ++L+ V++ + Q V Sbjct: 305 SFWIRNKIKDEEIWLVHEIKIFEYIIYIIKNLLPFWVLVFTFFIVLILYVKLRSSMNQ-V 363 Query: 341 SRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDL 400 ++ +D +TG++NR+ ++ L + G + +D+D KQ+ND GH GD Sbjct: 364 AKLIHTDPLTGIWNRRGFLKLTQRSLTIGNRHGKDWTILLVDIDHFKQVNDKFGHDTGDK 423 Query: 401 AITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH---IAPQK 457 + +AQ + +SIR++D R GG+EF I L + + + E + K +++ + Sbjct: 424 TLIKVAQVLSRSIRQTDAVCRWGGEEFAIFLFGVGQKASTDIAEDLRKEVENQVRLDDGN 483 Query: 458 EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S G+ + L +A+ +D+ LY K + +R Sbjct: 484 PVTLSIGVSQGTLD--LEEAFVNADQALYRAKSSGRNR 519 >UniRef50_C6HZ09 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZ09_9BACT Length = 1514 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 78/344 (22%), Positives = 149/344 (43%), Gaps = 33/344 (9%) Query: 181 WSFLQ-SGS-IGIDRKDIEKVF--TGRTVLSSI-YQDQRTKQNVMSLLTPVYVAGQLKGI 235 WS L SGS + R +I ++ GR++ ++ +DQ ++ +S L G Sbjct: 852 WSLLLLSGSDPNLQRSEIREIVEEAGRSLSRALDRRDQEVRERALSSLNRAITENARVGF 911 Query: 236 VLLD--------INKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGR--DIIINQSEDNLFQ 285 +L+D +N ++L + Y D PL + L D + R D + ++ + Sbjct: 912 ILVDMKDGELLYVNPHHLEELGYPPDYPLRGMPFRLFLADDEELRHVDEALKRARQEGRE 971 Query: 286 YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENI 345 +VS V+ +R L+ + W ++N + RL + + E Sbjct: 972 WVSLVNVR---LRRRDGAVFLFDLFGRWIDHEGSQRFLWTVVNATERN-RLQRRIEYEAT 1027 Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 D++T L NR+ + LE + + ++G S++ ID+D K +ND GH+ GD + Sbjct: 1028 HDSLTDLPNRRAMESYLEMAIARTRRNGGSLVTALIDLDDFKPVNDLYGHEAGDRLLREF 1087 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIIL------VDSTPQIAAQLPERIEKRLQ-----HIA 454 ++ ++ +R+SD+ RLGGDEF I+L + + ER+ + Sbjct: 1088 SKRVRTLLRESDFFCRLGGDEFVIVLEFAGRDPERVHKELEAALERLHGAVDIPFDVGEG 1147 Query: 455 PQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNK--QNKNSR 495 +G + G+ + E +T+ + +D +Y K + + R Sbjct: 1148 RLARVGMTLGVARLSEETETVDALLREADLAMYALKSWKGQRDR 1191 >UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LR80_ACIC1 Length = 710 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 6/173 (3%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 ++ + L+Q R +++DA+TGL+N + LT L +++ + + + ID+D+ K Sbjct: 493 SVAIENVLLHQEAERLSLTDALTGLWNYRYLTMTLGHEIERATRFRRPLALLMIDLDRFK 552 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 IND GHQ GD + LA+ + ++R+ D R GG+EF +IL ++ AA ER+ Sbjct: 553 DINDRHGHQAGDAVLVELARRLHTTVREVDTVARYGGEEFVVILPETDADGAAHTAERLR 612 Query: 448 KRLQHIAPQKE-----IGFSSGIYAMKENDTLHD-AYKASDERLYVNKQNKNS 494 + ++ E + S GI + + +A+DE LYV K + Sbjct: 613 QAVRGTPFHVEQMDIPVTASIGIAVFPRHGSSAAILLRAADEALYVAKHSGRD 665 >UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXY8_CHRSD Length = 608 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 7/174 (4%) Query: 329 MVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQ 388 + + RL + + +I DA+TGLYNR+ L L + L + + + + +D+D K Sbjct: 429 LSLSNVRLREQLEEASIRDALTGLYNRRFLDETLARELARAERQAVPLCVLMLDIDHFKP 488 Query: 389 INDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 IND GH GD A+ +A+ + +R+ D R GG+EF II+ + A + + + + Sbjct: 489 INDDYGHALGDRALVAVAELLNAHVRRDDIVCRYGGEEFVIIMPGAGLDAAQRRGDHLRR 548 Query: 449 RLQHIAPQKEI------GFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNSR 495 + + + + S G+ + D ++D LY KQ +R Sbjct: 549 CVSALDVEANVPAPIRLTVSLGLACYPQHGDNAEHLLHSADMALYEAKQGGRNR 602 >UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8QGL2_9ENTR Length = 550 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 101/538 (18%), Positives = 194/538 (36%), Gaps = 54/538 (10%) Query: 6 RMLRHFIAASVIVLTSSFLIFELV----ASDRAMSAYLRYIVQKADSSFLYDKYQNQSIA 61 + H +V + ++ + E + + + A L I + DS F + Sbjct: 14 FLPVHLCFLAVFLFSAFLTVHEALELKTSYEDRQRAQLAEIQKNLDSQFQESVDELVYYQ 73 Query: 62 AHVMRALAAEQSEVSPEQRRAICEAFESANN--THGLNLTAHKYPGLRGTLQTASTDCDT 119 + AL + + R + F++ L L + + L G Sbjct: 74 KMLSYALMHP---LDSDNAREAVQRFQTLRQRPLWQLQLNSPRSMPLNGVGDAWLARDPL 130 Query: 120 IVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMN 179 + +AL+ +A + +Y+ Y+ P Sbjct: 131 LKRDSALIDQEIRAALEFSFIMQFSD-PDHDFHSRFWYISRAGFYI-SSRPPQSPQELEQ 188 Query: 180 NWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLD 239 +++ + + D ++ + + +S YQ + +++L P+ G G++ +D Sbjct: 189 SYATMVQRAYFRAL-DPQQNISPQLRWTSGYQGLFDEGLMLTLSAPIISNGYWYGVLSMD 247 Query: 240 INKNNLRNIFYTHDRPLLWRFLNVTLTDTDS-----GRDIIINQSED------------- 281 + +RN+ LL L + D I +E Sbjct: 248 FPQARIRNLLAETRHTLLQGNLVFLDRKMNEVTRLHAPDEIPLNAEHRQELLNRMQHERS 307 Query: 282 ----------------NLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALI 325 N+ Y+ V L G++ L L+ ++ +L + + Sbjct: 308 GILRLGTQFASWSKLTNVDGYIINVQTLKQGMKQELGRVTLFLLSMWLLFILMLAVAHQV 367 Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + +VR L + ++ D +T L NR + + Q + I +D+D Sbjct: 368 IFRLVRRQDELSERLTWRANYDGLTRLLNRSAFFEQFVAQAAHCQQLQRPLSVIQLDVDH 427 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K++NDT GH GD A+ +A I ++RK D A R+GG+EFCI+L ++T A+ + ER Sbjct: 428 FKKVNDTWGHHAGDQALIRVASVISHTLRKYDVAGRIGGEEFCIVLPETTLAEASAVAER 487 Query: 446 IEKRLQ------HIAPQKEIGFSSGIYAMKEND--TLHDAYKASDERLYVNKQNKNSR 495 I RL + + I S+G+ + +E +D RLY+ K N +R Sbjct: 488 IRARLAAKTILVNASTTFNITLSAGVTSSEEQGDYDAESLQAKADSRLYLAKTNGRNR 545 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L + + RLY+ V R +I D +TGL+N L + L + ++G + + +D+D Sbjct: 212 LGLAIDNARLYETVRRLSIYDPLTGLFNHGQFYNLLAEELSRHQRTGRPLSLLMLDIDHF 271 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K++NDT GH+ GD + L+ +K+ R D R GG+E +IL ++ + A Q ER+ Sbjct: 272 KKVNDTYGHRAGDAVLQQLSGLLKKQARAIDRVCRYGGEELALILPETDREAARQTAERL 331 Query: 447 EKRLQHIAP------QKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + ++ + + S G + + A+D LY K+ +R Sbjct: 332 RRHVEKCCFATCGQQEIGVTVSIGAATCPDAAISAETLVNAADRALYAAKRAGRNR 387 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 2/176 (1%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 A+ + L + +++ D +TG+YNR+ L +LE+ ++ + + I Sbjct: 593 VAVFTFVDITKEKELSDMLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMF 652 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K IND+ GH GD + +A+ + ++IR +D R GG+EF II ++T + A Sbjct: 653 DIDFFKHINDSFGHDVGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKI 712 Query: 442 LPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 L E++ ++++ + + S G+ +++++DT K +DE LY K+ ++ Sbjct: 713 LAEKLRSLIRNLHFEEGINVTCSFGVASLEKHDTKETLLKRADEALYEAKKTGRNK 768 >UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSY0_9GAMM Length = 261 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 8/196 (4%) Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRL---YQNVSRENISDAMTGLYNRKILTPELEQ 364 F + + F++ T L+ N+++ + +L + + DA+TGLYNR+ + Sbjct: 47 FAVPAALIIPFFVGTPLVH-NLIKSNIKLLRVQKQLEELANKDALTGLYNRQYFFDHANE 105 Query: 365 RLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGG 424 ++ ++ + +D+D K IND GH GD + ++ IK +R+ D R GG Sbjct: 106 WDKRCRENSGHFSLLMLDVDHFKSINDRFGHPVGDRVLQRVSNVIKGFMRQEDMCARYGG 165 Query: 425 DEFCIILVDSTPQIAAQLPERIEKRLQHIAP----QKEIGFSSGIYAMKENDTLHDAYKA 480 +EF +L D+ A + ERI ++H A + S G M ND L + Sbjct: 166 EEFICLLPDTNAAGAKAVAERIRLGMEHQAFLKARGLSLSVSIGATTMSANDNLETLIER 225 Query: 481 SDERLYVNKQNKNSRS 496 +D+ LY K +R+ Sbjct: 226 ADQALYEAKDGGRNRA 241 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 3/178 (1%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 + A ++ + RL + + +D +TGL NR+ L+Q L + + + + Sbjct: 328 IIARHFNKLLEVVERLLREKDQLAGTDQLTGLNNRRRFKELLDQELIRYRRIPKPLSLLI 387 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 D+D K++NDT GH+ GDL + +AQ ++ ++R++D R GG+EF ++L +T + A Sbjct: 388 FDIDHFKRVNDTYGHETGDLVLKEMAQLLQATVRRTDTPARWGGEEFLVLLPATTAEAAM 447 Query: 441 QLPERIEKRLQH--IAPQKEIGFSSGIYAMKENDTLHD-AYKASDERLYVNKQNKNSR 495 L E++ + ++ + S G+ A + + + D+ LY K+ +R Sbjct: 448 ALAEKLRQAIEEHDFPRVGRVTASFGVAAFHDGEQEESALLRRVDKALYQAKRQGRNR 505 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 9/200 (4%) Query: 304 DILYFITSSWKSVLFWILTALILLNMV-----RMHFRLYQNVSRENISDAMTGLYNRKIL 358 +I F+ +S L +I+TA++L + ++ RL Q++ ++ D++T LYNR+ + Sbjct: 180 NIDDFLQASSIHQLAFIITAILLSTIGFTYNWLLNARLMQSLYSSSMKDSLTQLYNRRAM 239 Query: 359 TPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDY 418 L + + V+ + I +D+D KQ+ND GHQ GD + + ++ ++R +D Sbjct: 240 NEMLRREWMRSVRHNHPLSVIILDIDHFKQVNDQHGHQTGDQVLKKIGIILQHNLRAADI 299 Query: 419 AIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP----QKEIGFSSGIYAMKENDTL 474 R GG+EF I+L D+ A ++ E++ ++ + S G+ + D + Sbjct: 300 PFRYGGEEFLIVLPDTRIGEACKVAEKLRIIIEETKFWRQQSANLTASFGLSELWAEDKV 359 Query: 475 HDAYKASDERLYVNKQNKNS 494 K +DE LY K+N + Sbjct: 360 PSMIKRADEALYYAKENGRN 379 >UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepID=A4VQF4_PSEU5 Length = 466 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 2/184 (1%) Query: 314 KSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSG 373 + V+ + L L +R RL + ++ +D++TGL NR L L++ + Sbjct: 272 QVVVVFSAMLLTSLFWIRRLRRLNDQLRIKSQTDSLTGLANRAALDRRFATALEQARRYR 331 Query: 374 SSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD 433 + + +D+D K+IND GHQ GD + A + +R SD R GG+EF ++ + Sbjct: 332 RPLSIVMLDIDHFKRINDDFGHQMGDRVLRDFAALLDDCLRGSDAVGRWGGEEFLVLCPE 391 Query: 434 STPQIAAQLPERIEKRLQHIAPQKEI--GFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 ++ A Q ER+ ++ + + S+G+ + +DT + +D LY K Sbjct: 392 TSGPQAVQFAERLCEQARAFPFATGVSQTLSAGVAELSPSDTPDSLLRRADAALYRAKHE 451 Query: 492 KNSR 495 R Sbjct: 452 GRDR 455 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 7/180 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 A I +V+ + + + I D +TGLYNR L + + + + G + I Sbjct: 150 LAFIFSFIVKEELEKKRLLEK-AIIDHLTGLYNRFYLEEAGAREIARAKRYGFPISLIMF 208 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D KQ+NDT GHQ GD + A + ++R +D +R GG+EF ++L + P+ A + Sbjct: 209 DLDNFKQVNDTYGHQVGDRVLVKFASIVSSNVRSTDMPVRYGGEEFVVLLPHTYPEEAVK 268 Query: 442 LPERIEKRLQHIAPQKE-----IGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + ERI + + + E + S+GI + +L + + +D+ +Y K+ +R Sbjct: 269 VAERIREEFEKFLFRFEGEVMRLTVSAGISFCNSGECSLGELIQMADKAMYEAKEKGKNR 328 >UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=Q48MB2_PSE14 Length = 509 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 21/229 (9%) Query: 274 IIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMH 333 ++I QSED ++ L G L + IL+ +L +R Sbjct: 280 VVIGQSEDEVYAVWRRNAWLVGSATSVLCLGILWL--------------TWLLCRELRRR 325 Query: 334 FRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTL 393 R ++ +D +TGL NR+ L +E + +SG + + ID+D K N+ Sbjct: 326 HRAEDALASLAATDGLTGLDNRRQLDEAMETEWARAQRSGKQLSLLMIDVDHFKAFNERH 385 Query: 394 GHQEGDLAITLLAQAIKQSIRK-SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH 452 GHQ GD A+ L+AQ I +IR+ D R GG+EF ++L ++ A + E+I K + Sbjct: 386 GHQGGDEALRLIAQTISFNIRRPGDRVARYGGEEFVVVLPETELPGAMMIAEKIRKAAES 445 Query: 453 IAP----QKEIGFSSGIYA--MKENDTLHDAYKASDERLYVNKQNKNSR 495 + Q+ I S G+ + +++ D L + +D+ LY K +R Sbjct: 446 LPLFPDAQQPITVSIGVVSEMVRQGDKLEAFFGIADKALYQAKHKGRNR 494 >UniRef50_B9ZS17 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZS17_9GAMM Length = 491 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 8/249 (3%) Query: 248 IFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILY 307 I YT W + D +G + + L V P I + +D Sbjct: 238 IAYTLFATAAWHPSSQVNPDDRTGSHELSRRRLYILGSAAVLV---PAIILFTAGVDTDT 294 Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQ 367 ++ S+L ++L + ++R R Q + + + +D +TG NR+ L LE L Sbjct: 295 VRVAAGASILIFLLVLYRMSGLIRETQRQAQALEQLSRTDPLTGAANRRHLETVLEDELA 354 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 ++ + + + ID+D KQ ND GH +GD + L A Q +R SD R GG+EF Sbjct: 355 RVRRLDTPLALAFIDLDYFKQYNDLHGHAQGDRLLRDLVTAWHQELRPSDTIARYGGEEF 414 Query: 428 CIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYV 487 ++L + P A + ER+ +R P ++ S+GI + +T + +D+ LY Sbjct: 415 VVVLPHTGPDQAGTVIERLRQR----TPNQQ-TCSAGIACAEPMETAESLLRRADQALYR 469 Query: 488 NKQNKNSRS 496 K ++S Sbjct: 470 AKDEGRNQS 478 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 10/188 (5%) Query: 318 FWILTALILLNMVR--MHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSS 375 F +L AL L + R + + R+ +D +TG+ NR+ L E L + ++ G + Sbjct: 303 FLLLVALATLGLRSYLTTVRQREELRRQADTDPLTGVPNRRHLMSVAEHELARTLRYGGA 362 Query: 376 VMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDST 435 + +D+D K INDT GH GD I +LA A+ S R+ D A RLGG+EF +L ++ Sbjct: 363 LALFMVDIDHFKAINDTWGHPTGDRVIQVLAAAMAASAREQDTAGRLGGEEFAAVLPETD 422 Query: 436 PQIAAQLPERIEKRLQHI-------APQKEIGFSSGIYAMKEND-TLHDAYKASDERLYV 487 + AA + ER+ + ++ I S G+ A++ D ++ D +D LY Sbjct: 423 LEGAAIMAERLREAVEAITSALDDQGQPVRFTVSIGVAAIQLGDGSVEDILGRADRALYA 482 Query: 488 NKQNKNSR 495 K +R Sbjct: 483 AKHGGRNR 490 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 + M + L + ++I D +TGL+NR+ L L Q + + + + I +D+D Sbjct: 1200 IGMAIANLNLRATLEHQSIRDPLTGLFNRRYLEEYLSQEIARAQRQKHPIGVIMMDIDNF 1259 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K NDT GH GD + + + +KQ +R+ D A R GG+E +IL S+ + + E+I Sbjct: 1260 KHFNDTFGHDAGDYVLQKVGELLKQKVREYDVACRYGGEEMTLILPGSSLENTSMRAEQI 1319 Query: 447 EKRLQHI------APQKEIGFSSGIYAMKENDTLH-DAYKASDERLYVNKQNKNSR 495 + + + I S G+ A ++ ++ D +A+D LY K + +R Sbjct: 1320 REAIASLVVASGGQHLGSITASFGVAAFPKHGSIGIDLIQAADAALYRAKADGRNR 1375 >UniRef50_B1I2H9 Diguanylate cyclase n=3 Tax=Clostridia RepID=B1I2H9_DESAP Length = 471 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 1/171 (0%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + + + +L + RE +D +TG +N++ L L L++ + G+ + I +D+D Sbjct: 295 FVAVALANAKLIHRLEREAETDFLTGFFNKRALRNLLIVELERTTRYGTPLSVIFLDIDD 354 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K NDT GH GD+ + A+ I+ SIR D A R GG+EF IIL + + A + ER Sbjct: 355 FKTYNDTFGHVAGDVVLQKTAEIIRNSIRLVDIAGRYGGEEFVIILPGTKEEGAVAVAER 414 Query: 446 IEKRLQHIA-PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 I+K ++ P++++ S GI K ND++ + +D+ Y K+ +R Sbjct: 415 IQKSIEAFPFPRRQVTTSLGIALAKNNDSVDSLLERADQACYQAKRQGKNR 465 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 14/254 (5%) Query: 249 FYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYF 308 FY RP L + + TD + + + + + G + + L Sbjct: 173 FYGERRPQLMDLVFQSDTDLERRYAHVTREGDTLTAEGFCNALHDGHGAWILARVAPL-- 230 Query: 309 ITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQK 368 + ++ A+ ++ + RL +++ + D +T L+NR+ EQ Q+ Sbjct: 231 -----RDAAGQVVGAMEIIRDITDSKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQR 285 Query: 369 LVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFC 428 ++ + ID+D K +ND GH GD + ++AQ + ++R+ D R GG+EF Sbjct: 286 FLRYHHPMALCMIDIDHFKSVNDRYGHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFV 345 Query: 429 IILVDSTPQIAAQLPERIE-----KRLQHIAPQKEIGFSSGIYAMKEN--DTLHDAYKAS 481 I+L ++ Q A ER+ +R++ + + S G+ A+ + TL A+ Sbjct: 346 ILLPETDLQTACASTERLRVAVAERRIETPSGPVSVTLSLGVVAIADGPAMTLERLLDAA 405 Query: 482 DERLYVNKQNKNSR 495 D+ LY KQ +R Sbjct: 406 DQMLYRAKQAGRNR 419 >UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D632_MYXXD Length = 710 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 6/189 (3%) Query: 314 KSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSG 373 + VL I I + +LY+ + R +D +TGLYN + + ++ L + + Sbjct: 503 QDVLRMIEVIAIQAAQAVLRAQLYEQMERMATTDGLTGLYNHRTFQAKADEVLAQSRRYQ 562 Query: 374 SSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD 433 I D+D K +NDT GH GD + +A+ IK R +D R GG+EF II+ + Sbjct: 563 RKFSLILTDVDHFKSVNDTYGHPTGDQVLKGVARIIKTMARDTDIVARYGGEEFVIIMPE 622 Query: 434 STPQIAAQLPERIEKRLQHIAPQKE-----IGFSSGIYAMKEN-DTLHDAYKASDERLYV 487 + + A + ERI + ++ Q E I S GI ++ +D+ LY Sbjct: 623 TDAKGAFTISERIREAVKAEVFQTEMGPLRITMSLGIATFPDSAMEKQQLIDLADQCLYH 682 Query: 488 NKQNKNSRS 496 +K+N ++S Sbjct: 683 SKRNGRNQS 691 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 22/227 (9%) Query: 292 DLPGGIRVSLSIDILY-------FITSSWKSVLFWILTALILLNMVRMHFRL---YQNVS 341 ++ GGI V L + +Y I S + + L ++I + + R+ RL Y+ + Sbjct: 185 EVRGGISVELDVTDIYSQIRANTLIASGLTAAISLSLLSMIWILVSRLARRLTKAYETIE 244 Query: 342 RENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLA 401 +I+D +T L+NR+ L + + + ++ GS + + +D+D K++ND GHQ GD Sbjct: 245 VMSITDELTRLHNRRHFETRLAEEISRSLRYGSPMSLMILDIDHFKRVNDNYGHQAGDWV 304 Query: 402 ITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ----- 456 +T A +K ++RK+D R GG+EF +IL +ST A E++ + ++ Sbjct: 305 LTQFATLLKDNVRKADVPARWGGEEFVVILTESTISQARMAAEKVRRNVESAEFNIPDGR 364 Query: 457 -KEIGFSSGIYAMK------ENDTLHDAYKASDERLYVNKQNKNSRS 496 + S G+ ++ K +D+ LY KQ +R+ Sbjct: 365 SIPVTVSVGVASLDMISGDEMGSEADVLVKTADDALYRAKQEGRNRT 411 >UniRef50_C6MLU9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter sp. M18 RepID=C6MLU9_9DELT Length = 465 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 4/170 (2%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 + + + RLY+ ++ D +TGL NR+ L +LE+ + + G + I +D+D Sbjct: 290 IGIAVNNSRLYEETKSVSLHDPLTGLANRRFLDIQLEKVFELARRHGENQSVIMLDIDHF 349 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K NDT GHQ GD + LA +K +RKSD+ R GG+EF +L D+ +A ER+ Sbjct: 350 KIYNDTYGHQGGDQLLVRLAGILKAQMRKSDFVFRYGGEEFLALLPDTDLPMACDAAERV 409 Query: 447 EKRLQHIAPQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ++ + + S G+ A ++ +A+D LY K+ +R Sbjct: 410 RAAVER---EAGVTISLGVAAYRDGMPDKEALVRAADAALYRAKERGRNR 456 >UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TF13_9BURK Length = 531 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 27/262 (10%) Query: 259 RFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWK---- 314 + +T DSG + + D + + +Y H +PG + + + + W+ Sbjct: 252 SPTFLPMTAHDSGSYVSV-SPVDGVRRIFTYAH-VPGTPLIVAIAPAVDDVLAPWQRRSH 309 Query: 315 -----SVLF---WILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL 366 ++ F +++ + +L +R R + R +D +TGL NR++L L+ Sbjct: 310 VAAALTIAFGAVFVVVSWLLAFALRDKQRAQAALLRLASTDPLTGLSNRRVLDKRLDDEW 369 Query: 367 QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS-DYAIRLGGD 425 + + + + ID+D K+ NDT GH+ GD + +A I R+S D R GG+ Sbjct: 370 MRARRDNRPLSVLFIDIDHFKRFNDTYGHESGDEVLVAVADCIASVARRSVDLVARYGGE 429 Query: 426 EFCIILVDSTPQIAAQLPERIEKRLQ-------HIAPQKEIGFSSGIYAMKEND----TL 474 EF ++L D+T Q A + E+I ++++ H APQ + S G + + Sbjct: 430 EFAVVLPDTTAQGAFAVAEQIRRKVESRVIVRGHEAPQA-VTVSVGCATARPSTADFANG 488 Query: 475 HDAYKASDERLYVNKQNKNSRS 496 + A+D +LYV K +R+ Sbjct: 489 LELLAAADAQLYVAKNEGRNRT 510 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 6/179 (3%) Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 A+ + + + +D++TGL+NR+ E+ + + ++ + +D Sbjct: 869 AVATIRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMD 928 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K++NDT GH GD + LA+ + ++R+ D RLGG+EF ++L ++ A ++ Sbjct: 929 IDHFKRVNDTHGHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEV 988 Query: 443 PERIEKRLQHI-----APQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 +R+ + ++ A I S G + +T+ K +D LY KQ+ ++ Sbjct: 989 AQRLRRAIEKASMATDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNK 1047 >UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM04_9GAMM Length = 291 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 19/226 (8%) Query: 289 YVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDA 348 Y+ +P + SI L F L+ + V R + E+I+D Sbjct: 54 YLGFIPLNWGLYHSIPDLLVPIIFLLGGSFVCSVVLLTYSSV-ESIRRITRLEHESITDP 112 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TGL+NR+ + L++ + + + G + + +D+D+ K IND LGH GD + +AQ Sbjct: 113 LTGLFNRRHMDRRLDEEVARSRRYGQPLSVVMLDIDEFKGINDRLGHLAGDYILESIAQR 172 Query: 409 IKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL----------QHIAP--- 455 ++Q++R+ D A R GG+EF +I + A QL E++ + +H+ P Sbjct: 173 LRQNLRRVDLAARFGGEEFVVIAPHTDQDAALQLAEKLRSEIAQTPIILKGHEHVPPCAP 232 Query: 456 -QKEIGFSSGIYAM----KENDTLHDAYKASDERLYVNKQNKNSRS 496 + + S G+ ++ D + +D+ LY K +R Sbjct: 233 DELYVTVSVGVASLNIEPDSRDNADFLLQRADDALYRAKAGGRNRC 278 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 2/175 (1%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 +A + + + Q + +DA+T ++NR + LE+ +++ + G + I + Sbjct: 507 SAYQIEQLNQELTEANQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRHGRDLAVILL 566 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K++ND GH GD + L+++AI Q +R SD R GG+EF II ++ + A Q Sbjct: 567 DIDHFKRVNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEEFLIIAPETDLESANQ 626 Query: 442 LPERIEKRLQHIAPQK--EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 L ER+ +RL ++ K ++ S G+ + ++ + K +D LY K++ + Sbjct: 627 LAERLRRRLSNLQFDKVGQVTASFGVAELLPSEDRNSLVKRADNALYQVKESGRN 681 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 +++ + +L + + ++I D +TGL+NR+ L Q + + + S+ I D+D Sbjct: 784 VSLAIANIKLRERLENQSIRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGDIDHF 843 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 KQ ND LGH GD + + + ++ +IR SD A R GG+E I+L ++ + E + Sbjct: 844 KQFNDQLGHDAGDHVLKTIGRILQSNIRGSDIACRYGGEEMTIVLPQTSLEDTLVKAESL 903 Query: 447 EKRLQHIAPQ------KEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNSR 495 + + + + + S G+ +T+ + +A+D LY K +R Sbjct: 904 RQAIASMEVEYKGKELGTLTVSLGVACYPNHGETMVNIIQAADRALYQAKAAGRNR 959 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 2/168 (1%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 V Q + SD +TGL NR+ LE+ + SG I D+D K + Sbjct: 281 VTTRLGREQKLLEIAHSDPLTGLNNRRAAEHTLERLIDTARISGKPFSLIIGDIDHFKSV 340 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 ND GH GD +T +A +KQ IR D A R GG+EF I++ DS+ AA+L +RI K Sbjct: 341 NDRYGHPAGDRVLTSVAVILKQRIRLQDVAARWGGEEFLILVPDSSLDHAAELADRIRKG 400 Query: 450 LQH--IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ++ I + S G+ + +T + +D+ LY K+ +R Sbjct: 401 VEDLLIPNTGSVTISLGVAQLSPGETAASLIQRADKALYQAKRRGRNR 448 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats. Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 4/205 (1%) Query: 296 GIRVSLSID--ILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLY 353 G VS+ D I F T W+++L + L L ++ D +TGL+ Sbjct: 278 GYIVSIKRDNNIKMFDTIFWQNILLGSILILFLFTILFYFAISRIKFEEMATVDKLTGLF 337 Query: 354 NRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSI 413 NR E +++ + + I D+D K+INDT GH GD+ + LA+ IKQ+I Sbjct: 338 NRHKFQEIAEIEIKRSHRHKRPLSVILFDIDHFKKINDTYGHDIGDVVLRELAKIIKQNI 397 Query: 414 RKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--IAPQKEIGFSSGIYAMKEN 471 RK DYAIR GG+EF I+ ++ + A + E++ K ++ ++ S G+ ++ N Sbjct: 398 RKYDYAIRWGGEEFLILTPETDEKQAFAMAEKLRKAVESHTFPEVGKVTISLGVASVDPN 457 Query: 472 DTLHDAYKASDERLYVNKQNKNSRS 496 +++ A K +D LY +K +++ Sbjct: 458 ESIDQAIKKADNALYGSKLGGRNKT 482 >UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU2_ALHEH Length = 686 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 2/169 (1%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 + R Q + D +TGLYNR+ LE+ L+ ++G V + D+D K++ Sbjct: 512 ITERKRREQALRYRASHDGLTGLYNRRHTQRALERELRLAARTGHPVSVVLFDLDHFKRV 571 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 NDT GH GD + LA + + +R +D R GG+EF ++L + A QL E + Sbjct: 572 NDTHGHNAGDQVLRQLAGLVTERVRDTDIVGRWGGEEFLLVLPGTDETGAGQLAEVLRAY 631 Query: 450 LQH--IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + + S G ++ +K D+ LY K N +R+ Sbjct: 632 VAEARFPIPDPVTISLGYAQAGADEGADALFKRVDQALYAAKANGRNRA 680 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 113/241 (46%), Gaps = 12/241 (4%) Query: 267 DTDSGRDIIINQSEDNLFQ---YVSYVHDLPGGIRVSLSIDILYFITSSWKS--VLFWIL 321 D R + + ++ + + + L F+T + + ++ + Sbjct: 60 RMDGFRFLTMMRAREEFQDLPVIILTGREDRDTKIRGLEQGASDFVTKPFDTGELVARVR 119 Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 L + + R + + +I+D +T L+NR+ L +++ Q+ + G+ + + + Sbjct: 120 VQLKMKGLQDELKRSNEMLRTLSITDPLTHLHNRRHLMEMVDKEFQRSSRKGAPLSLVIL 179 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K+INDT GHQEGD +T+LA +++ +R D A R GG+EF ++L ++ Q A Sbjct: 180 DIDYFKKINDTYGHQEGDRVLTILADIVRRRLRSYDLAARYGGEEFVLLLPETPVQEALS 239 Query: 442 LPERIEKRLQHIAPQKE-----IGFSSGIYAMKEN--DTLHDAYKASDERLYVNKQNKNS 494 + ER+ +Q + I S G+ + +++ ++ +DE LY KQ + Sbjct: 240 IAERLRLEVQEHVFEGSLGGLVITISLGVATYPSSRVESIDSLFRQADEALYRAKQGGRN 299 Query: 495 R 495 R Sbjct: 300 R 300 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 97/177 (54%), Gaps = 7/177 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +++ ++ +L +++ ++I D++T LYNR+ + L++ + + SV I ID+D Sbjct: 893 HISLALVNLQLRESLKAQSIKDSLTDLYNRRYMEESLKREISLAQRKQHSVGLIMIDVDH 952 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K+ NDT GH+ GDL + ++ + ++R D A R GG+EF +IL +++ + Q E+ Sbjct: 953 FKEFNDTFGHKAGDLVLQEVSNFLMINVRSGDIACRYGGEEFLLILPEASLTDSQQRAEQ 1012 Query: 446 IEKRLQHIAPQ------KEIGFSSGIYAMKENDTLHD-AYKASDERLYVNKQNKNSR 495 I + ++ + + + + S G+ + ++ T +D +A+D LY K+ R Sbjct: 1013 IRQGIKQLDFKRYDQSFRSVTVSVGVASFPDHGTNNDQLIQAADTALYQAKKQGRDR 1069 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 9/166 (5%) Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 + + +D +T L NR+ LT + +++ ++ S++ + ID+D K++NDT GH G Sbjct: 323 RLEQLAQTDPLTQLLNRRALTERITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHLVG 382 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH------ 452 D + + Q + +IR SD R GG+EF ++L ++ A ERI ++ Sbjct: 383 DDVLRDVGQLLGHTIRGSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFARD 442 Query: 453 -IAPQKEIGFSSGIYAMKEN--DTLHDAYKASDERLYVNKQNKNSR 495 +A ++ S G+ + + D + +D LY K +R Sbjct: 443 SMAEPLKLTASIGVAVFPAARIENVEDLFARADAALYRAKAEGRNR 488 >UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSI3_ACIC1 Length = 517 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 1/169 (0%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 + + L + ++ +D +TG+ NR+ L L++ + ++ + + +D+D K Sbjct: 331 ALALANSWLLEQITLLAATDMLTGVANRRTLEENLDRMFAQASRAAQPISVVMVDIDHFK 390 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 INDT GHQ GD + +A+A++Q R SD R GG+EF ++L D+ AA E + Sbjct: 391 HINDTFGHQVGDQTLQRVARALQQGCRSSDLVARYGGEEFVVVLPDTDLAGAATAAENLR 450 Query: 448 KRLQHIAPQKEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNSR 495 +R+ + + + S G+ + A+D LY +K +R Sbjct: 451 RRIFGLDAEPRVTVSLGVATFPLHGGSPDHILSAADAALYQSKSAGRNR 499 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 7/207 (3%) Query: 296 GIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQN-VSRENISDAMTGLYN 354 + D L + ++ ++ + L + ++ + Q + R +D +TGL N Sbjct: 212 TLIRETDTDKLMIVAATIGTIGLLLGITYFLTWRLVLNLDMAQKHLKRLASTDELTGLKN 271 Query: 355 RKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIR 414 R+ + L++ Q+ ++ G + I +D+D K+INDT GH GDL + +A +K+++R Sbjct: 272 RRQIMKRLDEEYQRAIRLGEPLCLIMLDLDHFKKINDTYGHPFGDLVLKCVAGHMKKALR 331 Query: 415 KSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE-----KRLQHIAPQKEIGFSSGIY-AM 468 + D R+GG+EF I+ +T + A L +R+ +++ + + I S G+ Sbjct: 332 RYDVLGRIGGEEFLIVSPGTTREEAVVLAQRLRSTVEMEKIAYEDKKVTITVSCGVAFLY 391 Query: 469 KENDTLHDAYKASDERLYVNKQNKNSR 495 K +D + K +D LY+ KQ +R Sbjct: 392 KGDDNVEILLKRADSALYIAKQEGRNR 418 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 88/180 (48%), Gaps = 7/180 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 +A+ L + + +++ V D +T +YNR L +++ + + + + Sbjct: 303 SAVNHLGLALRNALIFKEVKLRADRDGLTRIYNRHSFDERLIYEIKRRRRYNHDLSLLMV 362 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D KQ+NDT GH+ GD+ + + + + ++ R +D A R GG+EF ++L ++ + A + Sbjct: 363 DLDHFKQVNDTYGHKAGDMVLRKVGEILTETFRTTDLAARYGGEEFVVLLPHTSEEAAWK 422 Query: 442 LPERIEKRLQHI-----APQKEIGFSSGIYAMKEN--DTLHDAYKASDERLYVNKQNKNS 494 L ERI + +Q + + S G+ +++ D +D+ LY K N + Sbjct: 423 LAERIRESIQGCVFRFDGHEFSVTASIGVASVEAGALTRDDDLLIKADKALYKAKNNGRN 482 >UniRef50_B7KW39 Diguanylate cyclase n=3 Tax=Methylobacterium extorquens group RepID=B7KW39_METC4 Length = 574 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 91/172 (52%), Gaps = 3/172 (1%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 +++ + L + + + + D +TGLYNR+ + LE+ ++ + G V I ID+D Sbjct: 374 MSLALSNIALREKLRNQALRDPLTGLYNRRYMEDSLERYVRLAEREGRKVSVIMIDLDHF 433 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K++ND GH GD + A AI ++R++D A R GG+E + L D + AA E+I Sbjct: 434 KRLNDEHGHATGDAVLCEAAAAIVGALRETDVACRYGGEEMIVFLPDCDLEDAAAKAEQI 493 Query: 447 EKRLQHIAPQK--EIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNSR 495 R++ ++ ++ S G+ ++ + T + +A+D LY K N ++ Sbjct: 494 RGRIESLSGTHGAKVSASLGVASVPSTSGTSAELIRAADTALYRAKHNGRNQ 545 >UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W5X6_MAGSA Length = 317 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 2/159 (1%) Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 + + +I+DA+TGL+NR+ L L + + V I D+D K +ND GH G Sbjct: 156 ELEKASITDALTGLFNRRRLDESFAHELDRAQRYAEPVSLIISDVDHFKSVNDIHGHHVG 215 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL--QHIAPQ 456 D + +A ++ +R D R GG+EF II ++ A L E++ + Sbjct: 216 DEVLQAMAGLLRHGVRALDVVGRWGGEEFLIICPNTDLDGATALAEKLRAAIASAQFPGI 275 Query: 457 KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S G+ ++ ++ D +D LY K N +R Sbjct: 276 GTSSASFGVAQYQDGESFKDTVARADTALYRAKVNGRNR 314 >UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Chloroflexus RepID=B8GC13_CHLAD Length = 728 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 9/214 (4%) Query: 291 HDLPGGIRVSLSIDILYFITSSWKSVLFWILTALI--LLNMVRMHFRLYQNVSRENISDA 348 H I + + DI + + + + L + + + + L + + I D Sbjct: 498 HHCTCCIPLVVQGDIFGLLYIAGEELPRSELIVMTGDTIKLALSNLALRATLREQAIIDP 557 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TGLYNR+ L L + L + + + ID+D KQ ND GH GD + LA Sbjct: 558 LTGLYNRRYLETSLSRELHRAQREQIPLTVAMIDIDHFKQFNDQYGHDAGDTLLRELAVI 617 Query: 409 IKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI------APQKEIGFS 462 ++ +R+SD A R GG+EF +IL A + + + +Q AP + I S Sbjct: 618 FREHLRQSDLACRFGGEEFVLILPGVNQATAQTRLQHLREVVQQRQIIFAGAPLRPITIS 677 Query: 463 SGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 G + ++ + H + +D LY K++ +R Sbjct: 678 IGYFTCEKEEIEPHILLQRADAALYAAKRSGRNR 711 >UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VL34_ALCBS Length = 487 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 16/232 (6%) Query: 279 SEDNLFQYVSYVHDLPGGIRVSLSIDIL--------YFITSSWKSVLFWILTALILLNMV 330 + + Y+H + V L++ ++ YF+ S + + + L L Sbjct: 251 KRSSYWMKKRYIHKNGHIVWVLLAVSLVRNGDGSPRYFL-SQIEDITAQVTAELTLREKQ 309 Query: 331 RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIN 390 L Q ++ +D +TGLYNR +L L Q + + + I +D+D KQ N Sbjct: 310 GELEELNQELASMARTDPLTGLYNRLVLMEGLRQEFSRCERRSEPMSVIFMDVDHFKQYN 369 Query: 391 DTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 D+ GH EGD A+ +A+A++ IR +D R GG+EF +L + Q A ++ ER + + Sbjct: 370 DSYGHVEGDAALQAVAEALRPVIRDTDVLARYGGEEFVALLPTANSQDAERVAERCRRAV 429 Query: 451 QHIAP-QKEIGFSSGIYAMKEND------TLHDAYKASDERLYVNKQNKNSR 495 I+ + + S G+ ++ D + A+D LYV K +R Sbjct: 430 AEISSLSRPVSLSVGVATLRFGDEADETKSPESLLSAADRALYVAKGAGRNR 481 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 L + RL + + D++TGLYNR+ L LE+ + + + G + + +D+D Sbjct: 457 LHARIEEIGRLQVALQELAVRDSLTGLYNRRYLDETLEREVSRARREGIPLSLVMLDIDH 516 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQ+NDT GHQ GD + +LA + IR D A R GG+EF I+L + + + Sbjct: 517 FKQVNDTYGHQVGDEVLRILASTLSADIRAEDVACRYGGEEFLILLPNMPLETTMLRAQG 576 Query: 446 IEKRLQ-----HIAPQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ++ H Q S G+ A E+ T D + +D+ LY K ++ Sbjct: 577 WRSAVEALSVKHGNFQITFTISLGVAAYPEHGKTPDDLTRCADQALYRAKNEGRNQ 632 >UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter RepID=B8JB86_ANAD2 Length = 764 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 6/183 (3%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 +L + RL+ R +D +TGL N + L+ L + + G + Sbjct: 568 LLVISMHAAQSIDRARLFDQTERLATTDGLTGLTNHRTFQERLDAHLGQAQRYGKRTSLL 627 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 D+D K +NDT GH GD + +A+ + ++ R +D R GG+EF I++ ++ A Sbjct: 628 LCDIDHFKSVNDTYGHPVGDQVLRGVARTLARAARGTDVVARYGGEEFAIVMPETDTGGA 687 Query: 440 AQLPERIEKRLQHIAPQKE-----IGFSSGIYAMKENDTLH-DAYKASDERLYVNKQNKN 493 + ERI +++ + + E + S G+ ++ + +D LY K++ Sbjct: 688 MVIAERIREKVGQLVFETEQGPLKVTLSLGVATFPDDGAQKPALIERADACLYHAKRHGR 747 Query: 494 SRS 496 ++S Sbjct: 748 NQS 750 >UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8W9_ALHEH Length = 302 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 4/178 (2%) Query: 322 TALILLNMVRMHFR--LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 T +++++ + + R L + + D +TGL NR L + +++ + G I Sbjct: 121 TRMVMVSAIDLSVRKALEAQLHHQANHDPLTGLVNRYHFEELLAREIERGQRYGGGFALI 180 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 +D+D K +NDT GH EGD + A+ + IR +D R GG+EF ++L + A Sbjct: 181 MLDIDHFKAVNDTYGHLEGDKVLRRFAEELTGKIRAADTLARWGGEEFMLLLPGTDIAGA 240 Query: 440 AQLPERIEKRLQ--HIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 L E I + + ++ S G+ + +++ K DE LY K + Sbjct: 241 RALAEAIRVAVNGCRMPVPGQVTVSLGVTGYRNGESVWGLLKRVDEALYAAKLAGRDQ 298 >UniRef50_B8GTD8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTD8_THISH Length = 451 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 5/167 (2%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 R + ++ + D +TG+ NR+ L Q + + + + I D+D+ K IND+ G Sbjct: 282 RTMDDERKQALIDQLTGVPNRQAFDERLAQEYSRWKRFNTPLALIMWDVDRFKLINDSYG 341 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H+ GD I +AQ +K+ IR++D R GG+EF ++L ++ Q A + E+I + + Sbjct: 342 HKAGDKVIRAVAQKLKERIRETDMVARYGGEEFVMLLTGASGQDALAIAEKIRAEIAGLG 401 Query: 455 PQ-----KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 I S+GI E DT A+ +D LY K +R Sbjct: 402 FHFRGERVPITISAGIALFAEGDTPETAFDNADRALYEAKNTGRNRC 448 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 7/177 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +++ ++ +L +++ ++I D++TGLYNR+ + L++ + + V I ID+D Sbjct: 937 HISLALVNLQLRESLESQSIKDSLTGLYNRRYMEESLKREINLAQRKQHPVGLIMIDVDH 996 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQ ND GH+ GDL + + + ++R D A R GG+EF +IL +++ + Q E+ Sbjct: 997 FKQFNDNFGHKAGDLILHEVGNFLMANVRSGDIACRYGGEEFLLILPEASLSDSQQRAEQ 1056 Query: 446 IEKRLQHIAPQK------EIGFSSGIYAMKENDTL-HDAYKASDERLYVNKQNKNSR 495 I K ++ + Q+ + S G+ + +++D LY K R Sbjct: 1057 IRKGIKQLNFQQYNSAFTSLTVSIGVACFPAHGKQGETLIQSADMALYQAKNQGRDR 1113 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 3/174 (1%) Query: 325 ILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMD 384 +L+ + + I D +TG+YNR LEQ +++ + S +D+D Sbjct: 438 VLMTDITEEEHYKSQLEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFSMAFMDID 497 Query: 385 KLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPE 444 K INDT GH GD + LA+ I +R +D R+GG+EF I++ +++ + A + E Sbjct: 498 HFKMINDTYGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPETSLENALIISE 557 Query: 445 RIEKRLQHIAPQ---KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 RI ++ I+ + ++I S G+ + D + YK +DE LY K+N +R Sbjct: 558 RIRSTVEGISSKDVPEKITISMGLVELNSWDNVQSFYKRADEALYKAKENGRNR 611 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 2/195 (1%) Query: 303 IDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPEL 362 + I Y +++ +++ ++ Y+ + + +D +TG +NR L +L Sbjct: 144 VPIPYSPDEIRQALSAYVVIMVLAYVFESALLSSYEKIKKLATTDPLTGAFNRYQLFKKL 203 Query: 363 EQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRL 422 E+ +++ + G+ + I D+D K INDT GH GD + + IK IRK+D R Sbjct: 204 EEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHNIGDQVLKITIDTIKNHIRKTDTLGRF 263 Query: 423 GGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK--EIGFSSGIYAMKENDTLHDAYKA 480 GG+EF II + A + E+I K ++ I + EI S G+ ++++ D K Sbjct: 264 GGEEFMIICPGINDEGARNIAEKIRKLVKDIKVEGIPEITISVGVAEYFPDESITDFIKK 323 Query: 481 SDERLYVNKQNKNSR 495 +D LY K+ +R Sbjct: 324 ADIALYSAKKKGKNR 338 >UniRef50_A1HSJ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSJ3_9FIRM Length = 653 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 7/165 (4%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + + I D +TGLYNR+ + L L + ++G ++ I +D+D K++ND+ GH+ Sbjct: 476 EKLYEQAIRDPLTGLYNRRYMEEVLAMELAQTERTGGTIGVIMLDIDFFKRVNDSYGHEA 535 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA--- 454 GD+ + L + I +S+RK D A R GG+EF +IL ++ + + E++ + +A Sbjct: 536 GDVVLKRLGRFIAESVRKGDIACRFGGEEFAVILPNTLAEAVCRRAEQLRQGFAGLAIIY 595 Query: 455 ---PQKEIGFSSGIYAMKENDTL-HDAYKASDERLYVNKQNKNSR 495 + S+G+ + T D + +D RLY KQ +R Sbjct: 596 REKIVGPLSLSAGVAVYPGDATSGEDLVRLADSRLYQAKQAGRNR 640 >UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEB9_9SPHN Length = 600 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 49/158 (31%), Positives = 78/158 (49%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 Q +D +TG+ NR+ L+Q + QSG SV D+D K+IND+ GH Sbjct: 438 QRALIMAQTDQLTGIANRRRTEFVLDQAIGAAEQSGKSVSIAIFDIDHFKRINDSYGHHT 497 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK 457 GD I +AQ +R D R GG+EF I+L D+T + A ++ ERI + ++ Sbjct: 498 GDEVIKRVAQDAAAQLRSGDLVGRYGGEEFVIVLPDATQETALRVGERIRETIEAANSGP 557 Query: 458 EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S G+ + + +T + +D LY K+ +R Sbjct: 558 PVTISIGVAELAQGETADALLRRADRALYSAKRAGRNR 595 >UniRef50_Q7MFJ4 GGDEF family protein n=2 Tax=Vibrio vulnificus RepID=Q7MFJ4_VIBVY Length = 451 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 86/371 (23%), Positives = 145/371 (39%), Gaps = 37/371 (9%) Query: 138 RHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVN-----VEYFAMNNWSFLQSGSIGID 192 +Y L + YY + + VN F+ N + Sbjct: 103 HETRNYFMSLFNNKNSVFYYRSYSGKKYLLDRKVNGFKVDARKFSENWCKTQFVCT---- 158 Query: 193 RKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYV-------AGQLKGIVLLDINKNNL 245 + R V+S+IY D +N++S+ +PVY G+ + D+ N+ Sbjct: 159 QHAWPDQLLDRAVVSTIYHDSDLGENLISVSSPVYSSEEENEIVGEYVFSLFYDLKDRNV 218 Query: 246 RNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDI 305 I+ + L + L + I + +F Y + Sbjct: 219 ETIYNQGFKTTLLTYNGYPLAKFAYTKTYIADNKTIFMFSY--------------PLSKL 264 Query: 306 LYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQR 365 + + + L L L + + VS E I D +TGL+NRKI L + Sbjct: 265 VIDYSYLFFVFLLLFFVYLNLYEQSKTRKQQLDEVSSEVIKDELTGLHNRKIFNDTLFKD 324 Query: 366 LQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGD 425 + Q IAID D K INDT GH GD I + +++K + R+ D+ IR GGD Sbjct: 325 TLEDSQY----TVIAIDGDGFKNINDTFGHHVGDEVICQVGKSMKATFRRGDFLIRTGGD 380 Query: 426 EFCIILVDSTPQIAAQLPERIEKRLQHIA---PQKEIGFSSGIYAMKENDTLHDAYKASD 482 EF IL D + A++L ++++ L++ I S+G+ + +TL + +D Sbjct: 381 EFLAILPDCDHRKASELVGKLKQHLKNSTLPYKDLTIAVSAGVATRAQGETLQELMMQAD 440 Query: 483 ERLYVNKQNKN 493 E LY K+++ Sbjct: 441 EALYKVKESRR 451 >UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZP43_9GAMM Length = 336 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 2/163 (1%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 + + + R +DA+TG++NR+ E E + + + + I +D+D K++ND G Sbjct: 161 QQQEELVRLASTDALTGVWNRQKFKTEAEHEVARAERYNLPLSLIFLDLDYFKEVNDRYG 220 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI- 453 H GD + + Q ++ +R+SD R GG+EF I++ + AA L E++ + + Sbjct: 221 HATGDAILREMCQRLQACLRESDRLGRWGGEEFLILVPHADSDRAALLAEKLRQAIADTP 280 Query: 454 -APQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 A + + S G+ + + D L D + +D LY K +R Sbjct: 281 AAHGQPMSISLGVVSREPGDALEDLVRKADAALYRAKARGRNR 323 >UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UW14_9AQUI Length = 218 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 2/154 (1%) Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 +D +TGL NR+ + L+ + ++G+ + ID+D K INDT GH GD + Sbjct: 61 ASTDPLTGLPNRREIMNFLDFEFNRAKRNGTPLSVAVIDLDDFKFINDTYGHVAGDEVLK 120 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--IAPQKEIGF 461 LA I++++R +D R GG+EF +++ D+ A ++ ER+ + ++ P + Sbjct: 121 SLASLIRRNLRSTDMVGRFGGEEFVVVMPDTPLNTAVKVMERLRRVVEETYFEPIGSVSI 180 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S G+ ++E D + + +D +LY K+ +R Sbjct: 181 SVGVAQLREGDDVSNLLSRADGKLYQAKREGKNR 214 >UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GW9_DECAR Length = 469 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 109/261 (41%), Gaps = 25/261 (9%) Query: 259 RFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSL------------SIDIL 306 ++ + + D+II+ + +N + + P + + S L Sbjct: 200 QWQSFYASKRPIMADLIIDDARENAVDRLYHGRFRPSPLILGGYEAEDFFPHFGESGRWL 259 Query: 307 YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSR-------ENISDAMTGLYNRKILT 359 +F + ++ ++ A+ L V R + + + +D++TGL+N + L Sbjct: 260 FFTAAPLRNGAGQVIGAIETLQDVTERRRAEEALRESEERYRSLSQTDSLTGLFNSRHLH 319 Query: 360 PELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYA 419 +L L++ + G + + +D D K +ND GH GD + LA AI +R+SD+A Sbjct: 320 EQLPNELERAGRYGRPLSLLVLDCDNFKCVNDRYGHLGGDKVLQSLATAIGHCLRRSDFA 379 Query: 420 IRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE------IGFSSGIYAMKENDT 473 R GG+EF ++L ++ Q A + ER+ + I S G+ ++ Sbjct: 380 FRYGGEEFVVLLPETAIQAALAIAERLRSQFASIETPAPSGDAICCTVSIGVAECVPGES 439 Query: 474 LHDAYKASDERLYVNKQNKNS 494 + +DE Y+ K + Sbjct: 440 EASLVRRADEACYMAKARGKN 460 >UniRef50_C6XL77 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alphaproteobacteria RepID=C6XL77_HIRBI Length = 459 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 9/172 (5%) Query: 332 MHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIND 391 + RL Q++ ++D +TGL+NR+ + +LEQ +++ G V + D+D K++ND Sbjct: 281 LRARLDQSME-LAVTDQLTGLHNRRYMENQLEQFMKRANMGGGPVSILLCDLDHFKKVND 339 Query: 392 TLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR-- 449 GH GD + + + +IR SD A R GG+EF +I+ D+T Q+A ERI ++ Sbjct: 340 GHGHDVGDEVLRQFSDRLMHNIRPSDIACRYGGEEFMVIMPDTTIQMAQLTAERIREKVD 399 Query: 450 -----LQHIAPQKEIGFSSGIY-AMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + + ++ S G +D++ K +DE LY K+N +R Sbjct: 400 GAPFSINNGLGRLDVTMSGGASVTFPPDDSVAQLIKRADEALYNAKENGRNR 451 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 6/172 (3%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 + R+ + R +D +TG++NR+ + + + G ++ + +D+D K+I Sbjct: 403 ITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLDIDHFKRI 462 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 NDT GH GD+AI LA Q IR D R+GG+EF I+L ++ A + ER+ + Sbjct: 463 NDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALLVAERLRQA 522 Query: 450 LQHIAPQKEI-----GFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + I E+ S G+ E D T+ +D LY K++ ++ Sbjct: 523 VAAIRIPAELGTVAFTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRNK 574 >UniRef50_B3E243 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E243_GEOLS Length = 646 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 2/177 (1%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 I+ ++ + + +L + + +I+D +TG+YNR+ L L + L + + G I Sbjct: 463 IIGSVTVFRDITERKQLEEQLRLLSITDPLTGVYNRRFLQETLLKELCRAERHGEPFSLI 522 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 +D+D KQ+ND GH GD + L + I++ IR SD R GG+EF ++L + A Sbjct: 523 MLDIDHFKQVNDRYGHDVGDQVLRHLVKLIQKRIRSSDCLARWGGEEFIVLLPHTGLLAA 582 Query: 440 AQLPERIEK--RLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 A L E + + R+ + + S G+ + DT+ + +D +Y+ KQ + Sbjct: 583 AALAETLLEDLRVSELKGVGCVTASFGVAVSRPGDTVEQLGQRADALMYLAKQAGRN 639 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 L + +L + + I D++TG +NR+ L LE+ L + + G + + +D+D Sbjct: 537 LRKQLEEIEKLQVALREQAIRDSLTGCFNRRYLDETLERELSRSRREGYPLSLLILDLDH 596 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K+INDT GH GD A+ +LA+ ++ IR D R GG+EF I++ IAA+ E Sbjct: 597 FKRINDTYGHMAGDQALIVLAETLRAGIRHEDVLCRYGGEEFVILMPRMPLAIAAERAEL 656 Query: 446 IEKRLQHI-----APQKEIGFSSGIYAMKENDTL-HDAYKASDERLYVNKQNKNSR 495 ++ I + S+G+ A ++ + + +A+D+ LY K +R Sbjct: 657 WRSKIAEIRVTFGNFELSFTASAGVAAYPDHGKMPDELTQAADQALYTAKNEGRNR 712 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 72/373 (19%), Positives = 140/373 (37%), Gaps = 21/373 (5%) Query: 127 LPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFL-- 184 FD GN + + ++ + V + ++FL Sbjct: 140 FSIFDLGKGGNDRDTIGFKYTFPVTDGNIFIGNVEFTLPFSAVRVEMRKIFRGEYNFLII 199 Query: 185 QSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNN 244 + + ++ + + Y ++ + V+ P ++ + L I Sbjct: 200 KDLIYSKKFSEEKQNYIQSEIDPDFYYEEDPEFKVIRWNIP----EEIISEINLQIRNKL 255 Query: 245 LRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSID 304 N+ + + D I I+ ++ Y+ Y + Sbjct: 256 KGNLEDFKPKSIAVDING----DYYIASFIPISNKKEKYIGYLVYYEKDNTYGVFKNTFI 311 Query: 305 ILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQ 364 I Y ++ +LT +L +++ F+ + D +TG+YN+ L+ Sbjct: 312 ISYV---GINLLVGLLLTMSFILGVIKERFKAMAEI------DTLTGIYNKGKFNHLLQV 362 Query: 365 RLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGG 424 L + + G + I D+D K+IND GHQ GD + LA+ + +IR +D+ R GG Sbjct: 363 ELDRSKRYGRPLSLIIFDIDHFKKINDAFGHQAGDYVLKTLAKIVSSNIRSTDFFARWGG 422 Query: 425 DEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASD 482 +EF I+ ++ + A L E+I K ++ + ++ S G+ ENDT+ K +D Sbjct: 423 EEFVILAPETDLEGAQILAEKIRKAIEEYPFETVGKVTSSFGVTEAFENDTVDSFVKRAD 482 Query: 483 ERLYVNKQNKNSR 495 LY K +R Sbjct: 483 VALYKAKDKGRNR 495 >UniRef50_Q31E96 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E96_THICR Length = 775 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 119/270 (44%), Gaps = 9/270 (3%) Query: 233 KGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHD 292 ++ I + L N+ + + P D II + +Y Sbjct: 502 VAVIGHHIKNSGLANVKISGEMPFRADIAIAVRDDWPELHSIIQKVLQQ--IPPETYAEI 559 Query: 293 LPGGIRVSLSIDILYF-ITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRE----NISD 347 ++VS + +T +L + +R + Q +++ +++D Sbjct: 560 SNKWLQVSYQKQYNWQQMTIVLAPILLLLGVFAFFNRKLRQTQKKLQETNKQLSILSVTD 619 Query: 348 AMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQ 407 +TG+YNR+ L L+ ++++ + GS+ I +D+D K++ND GH GD + + AQ Sbjct: 620 HLTGVYNRQYLDQRLDSEVERVNRYGSTFSVIMMDLDNFKKVNDKFGHLVGDEVLVVFAQ 679 Query: 408 AIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEI--GFSSGI 465 +++ IRK D R GG+EF +I ++ A QL +++ K ++ + I S G+ Sbjct: 680 TVEKEIRKIDIFGRWGGEEFILICPETPLTHAIQLGKKVRKSIESQDYPENISQTVSLGV 739 Query: 466 YAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + ++D +D+ LY KQ ++ Sbjct: 740 AEYQTGEAINDCLNRADQNLYKAKQLGRNQ 769 >UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZT6_DESAD Length = 442 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 132/337 (39%), Gaps = 13/337 (3%) Query: 167 FYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQD----QRTKQNVMSL 222 P+N F + + +G + K + + Y + +NV+S Sbjct: 107 LKLPLNTRLFVSTKLNINKLSELGDFPLAVTKDGYAESYIREKYPEIKLVSYPNENVISD 166 Query: 223 LTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDN 282 +V + L +K + + FY + + + R I ++ Sbjct: 167 SRLAFVTDYPAAMYHL--HKMGIHDKFYVAETLYTKQLHAAVSKGNKNLRKFIEEGMQNI 224 Query: 283 LFQYVSYVHDLPGGIRVSLSIDILYFITSSW--KSVLFWILTALILLNMVRMHFRLYQNV 340 Q ++ + ++S+ +F+ ++ ++ L + + R + + Sbjct: 225 PDQEINR---ITQKWIQAVSVTPDWFLPTAIAGFGIMAGGFIFLYIFTLKRQVASRTEEL 281 Query: 341 SRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDL 400 + + +D +TGLYNR+ + + + + + + FI ID+D K INDT GH GD Sbjct: 282 RQMSQTDMLTGLYNRRKMDEIMHHEFDRFKRYNTPITFILIDIDNFKTINDTYGHAVGDN 341 Query: 401 AITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK--E 458 + A+ + + RK+D R GG+EF ++ ++T + E++ +R+ Sbjct: 342 VLVRFAEILISNTRKTDRIGRWGGEEFIVVCPETTSGEGMIIAEKLRQRIAETRFPTINN 401 Query: 459 IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S GI + + D + D LY +K+ ++ Sbjct: 402 CTASFGITEINQQDDFMSLFARCDTALYSSKEQGRNK 438 >UniRef50_C7HZC5 Diguanylate cyclase n=1 Tax=Thiomonas intermedia K12 RepID=C7HZC5_THIIN Length = 400 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 4/180 (2%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 + + L L+ + RL + + + D +TGL NR+ LE+ + Sbjct: 204 VASFLSLIYGGMLMARLVRRLHDLALKDPLTGLLNRRAAQQLLEREWASYRHKDLPFCVL 263 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 ID+D K+IND GH GD +T LA +++ R +D+ R+GG+EF + L + A Sbjct: 264 MIDIDHFKRINDEYGHAVGDRVLTGLATLLREGTRPTDHVARMGGEEFLVFLPQTELPSA 323 Query: 440 AQLPERIEKRLQH---IAPQKEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 ER+ + + I S G+ D+ D +D LY K +R Sbjct: 324 QAAAERLRQHTAAWVLQPEELSITISIGVAQAAAEDSAFDDLLIRADRALYAAKSAGRNR 383 >UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5K2_HYDS0 Length = 901 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 2/174 (1%) Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 L +L + + + +I D +TG+ NR+ L +LE+ L + + I D+ Sbjct: 724 LCILQDITEESMIIKYFEELSIKDDLTGICNRRCLEDKLEEYLTLAKRYNRPLSVIMFDI 783 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 D K IND+ GH GD + +A + +IR +D R GG+EF II ++T + A L Sbjct: 784 DFFKHINDSYGHDIGDKVLKTIANIVLSNIRATDILARYGGEEFVIISPETTLEDAKALA 843 Query: 444 ERIEKRLQHIAPQK--EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 E++ K +++ ++ I S G+ ++ + DT K DE LY K+ +R Sbjct: 844 EKLRKEIENFLFEEGFSITCSFGVTSLNQEDTKETILKRVDEALYKAKREGRNR 897 >UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors n=2 Tax=Synechococcus elongatus RepID=Q31K54_SYNE7 Length = 1099 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 7/175 (4%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L + + +L + + +EN+ D +TGL+NR+ L EQ L + +SG S+ + +D+D Sbjct: 892 LALAIANLQLRETLRQENLRDPLTGLFNRRYLQEFFEQELARAKRSGDSIGILMLDIDYF 951 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K+ ND GH GD+ + +A+A+ +R SD R GG+E I++ ++ +++A+ ++I Sbjct: 952 KRFNDEFGHDAGDMVLKQVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQI 1011 Query: 447 EKRLQHIAPQ------KEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNS 494 + + + + S G+ A E+ K++D LY K + Sbjct: 1012 RQAIAQLIISYHEQTLPSLTISIGVAAFPESGLASDTLIKSADTSLYQAKAAGRN 1066 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 7/173 (4%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 + +L + + R+ D +TG+ NR+ + EQ +Q+ + + + F +D+D KQ+ Sbjct: 413 ITERKQLEEELKRQARIDFLTGVSNRRYFMEQAEQEIQRTSRYDTPLSFFMLDIDLFKQV 472 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 NDT GH+ GD+ + +A ++++R+ D R+GG+EF I+L ++ AA++ ER+ Sbjct: 473 NDTYGHKSGDIVLKRMASVCRETLREIDIIGRVGGEEFAILLPETDKAQAAEVAERLRSV 532 Query: 450 LQ------HIAPQKEIGFSSGIYA-MKENDTLHDAYKASDERLYVNKQNKNSR 495 L + S G+ + + D + +DE LY K+ +R Sbjct: 533 LADEKVPTEAGAPIQFTVSIGVASRVSSQDNIDMLLNLADEALYQAKKYGRNR 585 >UniRef50_C9QJS4 Putative two-component response regulator and GGDEF family protein YeaJ n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QJS4_VIBOR Length = 471 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 96/407 (23%), Positives = 162/407 (39%), Gaps = 45/407 (11%) Query: 110 LQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYE 169 L + T + P +E ++ S + A + ++ + +Y+ Sbjct: 73 LNKIYDESGTYGLDIYVYPVTGGDLEIKGKEEIIVSSMIYAFGNMNSFIGKENSLIYYRS 132 Query: 170 ----------------PVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQ 213 + F S ++ + R ++SSIY D Sbjct: 133 YENDGKLMSFSRLDDFQFDKNMFNQERCQMYNLCSTY----ATKESLSDRLLVSSIYNDT 188 Query: 214 RTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRD 273 T ++L +PV G++ G + DI D +L + +++ D Sbjct: 189 ITGSKTITLSSPVIDQGKVIGDISADI----------YFDMSILAQEASISSRDQGGMNY 238 Query: 274 IIINQSEDNLFQYV---SYVHDLPGGIRVSLSIDILYFITSSWKSVLFWI-LTALILLNM 329 I ++ + + + SYV D + L I L T + + I L A + Sbjct: 239 IYVDYPQYPMGELSFRSSYVIDNKSTLVFELPISKLILDTLPFFVLSLVISLFATVHYMQ 298 Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILT--PELEQRLQKLVQSGSSVMFIAIDMDKLK 387 ++ + + V E+ D MTGLYNRK+ + L L ++ +AID +KLK Sbjct: 299 YKIQKKRFSEVYEESNRDEMTGLYNRKVFSTPEFLSDTL------NQTIAILAIDGNKLK 352 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 INDT GH GD AI +A+A+K R +DY +R GGDEF +IL +L E+++ Sbjct: 353 TINDTYGHHCGDAAIKHIAEAMKGVFRDTDYVVRSGGDEFLVILPGCPTPRVMELKEKLK 412 Query: 448 KRLQHIAPQK---EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 K + + E+ S GI + + L A A+DE LY +K Sbjct: 413 KEVARKKVRPYNMEVSVSVGIAFKRPEEELEYALIAADENLYRDKAQ 459 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 125/296 (42%), Gaps = 26/296 (8%) Query: 213 QRTKQNVMSLLTPVY----VAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDT 268 Q T V L +Y Q G + +I + LR++ T F +V+ D Sbjct: 203 QGTHLMVTDLEGRIYLHAPNQEQHVGRTVPEIKNSALRDMQSTP-------FTSVSAADH 255 Query: 269 DSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLN 328 R+++ + + + +++ P + + + + + S++ ++ A + Sbjct: 256 ---RELVAGDTRISRYPLLAFAS-FPREMVLEPWKN--HAMVYGGASIVLVLVVAGLSTL 309 Query: 329 MVRMHFRLYQNVSRENI---SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +VR RL + + +D +TG NR+ + ++ + G + I ID+D Sbjct: 310 LVRGQIRLNRQSRELALAASTDMLTGALNRRAFMESASREFARVCRYGGHLSCIMIDLDH 369 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K +NDT GH GDL ++ A I +R+ D R GG+EF I+L + AA + E Sbjct: 370 FKNVNDTYGHAAGDLVLSSSAHYIASRLREPDMFCRYGGEEFVILLPGTDRNGAATVAEE 429 Query: 446 IEKRLQHIAPQK-----EIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 + L + Q+ + S G+ + TL +D+ LY K+N +R Sbjct: 430 LRAGLAGLDLQRGDEKLPLTASFGVAEIHAQCATLDTLLSLADQALYEAKENGRNR 485 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 12/207 (5%) Query: 301 LSIDILYFITSSWKSVLFWILTALILL-----NMVRMHFRLYQNVSRENISDAMTGLYNR 355 + F+ + W S L + +++ + L +S D +TGLYNR Sbjct: 178 YEVPPEDFMNAGWLSALAIVAGEFLVILSSFCTIWMASDELQDELSEIARIDPLTGLYNR 237 Query: 356 KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK 415 + + + +SG+ I D+D K++ND GH GD + A +K+ IRK Sbjct: 238 RAFDECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGHHVGDEVLRRFANTLKEHIRK 297 Query: 416 SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK------EIGFSSGIYAMK 469 D R GG+EF ++L + ++ E++ + + S G+ Sbjct: 298 HDVVARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQITIGDDVCLTLSASFGVAHYD 357 Query: 470 ENDTLHDA-YKASDERLYVNKQNKNSR 495 +D A +D LY K+ +R Sbjct: 358 SSDREWSAVLHRADNALYAAKKQGRNR 384 >UniRef50_A6CUQ3 Putaitive GGDEF domain n=1 Tax=Vibrio shilonii AK1 RepID=A6CUQ3_9VIBR Length = 456 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 102/373 (27%), Positives = 168/373 (45%), Gaps = 43/373 (11%) Query: 140 QDDYGSGLGMAEEKFH--YYLDL-------NDRYVYFYEPVNVEYFAMNNWSFLQSGSIG 190 Q + S +A + + YY + + VN E F+ S Sbjct: 106 QRMFNSMPELALGQEYLLYYRSYEGMKILSSHAFGLTNTNVN-EVFSKKICLESFKCSKY 164 Query: 191 IDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFY 250 ++D++ R V+S IY+D T + V+++ +PVY + G V D+ Y Sbjct: 165 APQEDLD----NRIVVSDIYRDNVTNKTVITISSPVYDEFGMVGDVNADV---------Y 211 Query: 251 THDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGI--RVSLSIDILY- 307 P L+ + T ++ GR+III ED + + H + R+S+ I Y Sbjct: 212 LDKFPFLYNKQYFS-TRSEIGREIII---EDTRYPFHQSAHAERTQVDDRLSIVYKIPYS 267 Query: 308 --FITSSWKSVLFWILTALILLNMVRMHFRLYQ-NVSRENIS-DAMTGLYNRKILTPE-L 362 + S W L +++ + + + + ++ I D +TGLYNR IL + Sbjct: 268 KIVVDSLWIYFSMVALFFYVVIRLDELKVKREKLKLAELAIKLDELTGLYNRAILRDSGI 327 Query: 363 EQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRL 422 + ++K + I ID DKLK IND GH GD AI +AQ ++Q R+SDY IR Sbjct: 328 KYAIEK-----KGLAVIVIDGDKLKLINDNYGHHVGDEAIVYIAQCMRQCFRESDYLIRS 382 Query: 423 GGDEFCIILVDSTPQIAAQLPERIEKRLQHI---APQKEIGFSSGIYAMKENDTLHDAYK 479 GGDEF ++L Q A +L + + ++ A + + S G+ ++E ++L A K Sbjct: 383 GGDEFLVLLPGCGLQTAERLANTLSRTIRSKTYGANKLTLDISLGVTVLQEKESLSSAIK 442 Query: 480 ASDERLYVNKQNK 492 +D LY K+NK Sbjct: 443 RADALLYQVKRNK 455 >UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21PN7_SACD2 Length = 565 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 5/166 (3%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 + + D +T L NR+ L + + G + D+D K+INDT GH Sbjct: 396 QLEEQRYKATHDPLTSLPNREAYNERAFHELHRFKRYGHPLTLAVCDLDHFKKINDTFGH 455 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP 455 Q GD + L+AQ + +R D+ R GG+EF +++ ++ + A + +++ + Sbjct: 456 QAGDKVLKLVAQVVSTRLRNVDFVARYGGEEFVLVMPETDAEQAKTVLDKMRAAIAKTPF 515 Query: 456 QKE-----IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + + I S GI + D++ A+ +D+ LY K N ++ Sbjct: 516 RFKDSPVTITMSFGIVQFRGEDSVESAFARADKALYEAKANGRNQC 561 >UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0Y0_9NEIS Length = 528 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 9/196 (4%) Query: 306 LYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQR 365 + ++ +W+ ++ +V ++ +D +TGL NR+ L LEQ+ Sbjct: 319 AFVGFFGYRMFTYWLDSS---TRLVNELAEANSKLAHLARTDTLTGLPNRRALEEALEQQ 375 Query: 366 LQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGD 425 LQ+ ++G + +D+D K +ND GH GD I L +A+ ++IR D A R GG+ Sbjct: 376 LQRSRRNGEQASLVLLDIDHFKVVNDRYGHDAGDAVIRALGKAMSETIRNVDVAGRWGGE 435 Query: 426 EFCIILVDSTPQIAAQLPERIEKRLQ-----HIAPQKEIGFSSGIYAMKENDTLHDAYKA 480 EF ++L + + AA ER+ R++ H S G+ + K Sbjct: 436 EFLVVLANVDEEGAAAFAERLRTRVESSTVAHGELHVRYTISLGVAPLSTPHR-EAWLKR 494 Query: 481 SDERLYVNKQNKNSRS 496 +DE LY K + +R+ Sbjct: 495 ADEALYRAKLDGRNRT 510 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 + + + L + + ++I D +TGLYNR+ L L Q + + + + + ID+D Sbjct: 1433 VALAIANLNLRETLQYQSIRDPLTGLYNRRYLEEVLTQEIARGQRRQHPISVVMIDVDYF 1492 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K+ NDT GH GD + + +K+++R SD A R GG+E +IL +S+ + E I Sbjct: 1493 KRFNDTYGHDVGDYVLQTIGAMLKETVRGSDIACRYGGEEMTLILPESSLEETTIKAEEI 1552 Query: 447 EKRLQHIA------PQKEIGFSSGIYAMKENDTLH-DAYKASDERLYVNKQNKNSR 495 + + + ++ S GI ++ T +A+D LY K ++ Sbjct: 1553 REAIAQLTLAYNGQHLGKLTISLGIAGFPKHGTTGIALIQAADAALYRAKAAGRNQ 1608 >UniRef50_Q2VZ27 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VZ27_MAGSA Length = 355 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 117/285 (41%), Gaps = 23/285 (8%) Query: 230 GQLKGIVLLDINKNN--LRNIFYTHD-----RPLLWRFLNVTLTDTDSGRDIIINQSEDN 282 GQ+ ++ DI + F RPL + + D ++ + + Sbjct: 70 GQVIDLLPADILPADRRFMLEFEYGFVRRTGRPLWRSYTALFGQDLPQTWQRLVLPAGNG 129 Query: 283 LFQYVSYVHDLP-----GGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLY 337 +Y D+P G + L ID + + + + L+ L R Sbjct: 130 RLVVGAYPVDVPPPAQGGEALLHLVIDRVPVVLAEDGGIEDLALS----LGAFCDTSRHM 185 Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + D++T NR+ L + G S +A+D+D K+INDT GH Sbjct: 186 AELEELASRDSLTQTANRRHFEHLAGLELDHARRMGRSFALLALDIDHFKRINDTWGHAA 245 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK 457 GD A+ A A + S+R+ D R+GG+EF + L ++ P A + ER+ ++ + + Sbjct: 246 GDEALKAFANACRLSLREYDILGRIGGEEFAVALPNTGPDGARVIAERLRAAVEELVVRP 305 Query: 458 ------EIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ++ S GI ++E D T+ + +D+ LY K + +R Sbjct: 306 AKGELFDLTVSIGIAQLREGDLTVETMLERADQALYRAKNSGRNR 350 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 6/179 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 + + + RL ++ +D +TG YNR+ Q LQ+ + + + Sbjct: 219 VLVCVFRDISARKRLESDLKHLATTDGLTGAYNRRSFVEVCGQELQRADRRARPTSLLLM 278 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K++ND GH GD + + + ++ +R D R+GGDEF ++L +T + A + Sbjct: 279 DIDHFKRLNDRFGHAAGDEVLRQIVETGRRVLRSEDVVGRIGGDEFAVLLPATTLEQAGR 338 Query: 442 LPERIEKRLQHIAP-----QKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNS 494 + E++ + +A S G+ K + T+ + + +D LY K + Sbjct: 339 VAEQLRTTYERLAVPARGGTATFTVSFGVAEWKPHLRTVEELLQRADRALYAAKNAGRN 397 >UniRef50_A8GZ56 Diguanylate cyclase n=3 Tax=Alteromonadales RepID=A8GZ56_SHEPA Length = 456 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 6/196 (3%) Query: 306 LYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQR 365 ++ +T W +L +AL M ++ Q ++ ++D +TGL NR+ ++ Sbjct: 255 IFVVTICWFVILMISYSALFQEKMDLERRQMEQLLTLAAMNDQLTGLANRRKFHEFAQEE 314 Query: 366 LQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGD 425 L ++ ++ S + +D+D K+INDT GH GD + L++ +K S+R D R+GG+ Sbjct: 315 LNRVQRNKSQFWVLVMDVDFFKKINDTAGHDMGDQVLIELSKVLKNSVRAVDLVSRMGGE 374 Query: 426 EFCIILVDSTPQIAAQLPERIEKRLQHIAPQ------KEIGFSSGIYAMKENDTLHDAYK 479 EF IIL D+T Q A ++ E I ++ I + I S G D L + K Sbjct: 375 EFSIILSDTTKQGAERVAESIRSSIESIKIKGWTDIYGPITASIGGATSDGADKLENTLK 434 Query: 480 ASDERLYVNKQNKNSR 495 +D LY KQ ++ Sbjct: 435 IADSALYQAKQRGRNQ 450 >UniRef50_B9L5Q2 Diguanylate cyclase n=2 Tax=Nautilia profundicola AmH RepID=B9L5Q2_NAUPA Length = 463 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 131/279 (46%), Gaps = 12/279 (4%) Query: 226 VYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDT-------DSGRDIIINQ 278 Y A + +++ +INK N+ + PL ++ + D + D I Sbjct: 181 AYAAIDIMPVLIYNINKYEFANLKISGKTPLEFKMQFMIRNDYTPLASAINKAIDTITPY 240 Query: 279 SEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQ 338 ++ ++ YV G S+ + + I + ++ + L ++ +L + Sbjct: 241 DKEKIYGKWIYVKYQTG---FSVEQVLTWAIIIGILITILFVYWIIRLKKEIKKRHKLEE 297 Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 + + + D++T +YNR + L+ +++ + + I D+D K+INDT GH+ G Sbjct: 298 ELKKISFYDSLTDIYNRYKIDLSLKSQIELAKKYKIPLSIIFFDIDDFKKINDTYGHKVG 357 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-- 456 D + L++ IK++IR++D R GG+EF IIL ++ A + +++K ++ + Sbjct: 358 DEVLIELSKLIKRNIRQTDIFGRWGGEEFIIILPNTDLTTATHIANKLKKAIEEHSFPII 417 Query: 457 KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 K + S G+ +K+ND+L+ +D LY K +R Sbjct: 418 KHLTCSFGVTELKDNDSLNTLTVRADSFLYEAKNKGKNR 456 >UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRN6_9GAMM Length = 504 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 10/167 (5%) Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 + D +TG YNR+ L QR + + + +D+D K +ND GHQ G Sbjct: 333 QLQEMARRDPLTGAYNRRYFDEMLSQRFEAATRHQQPLSLGFLDLDHFKMVNDRYGHQAG 392 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-- 456 D+ + +A+AI +R D+ R GG+EF ++L ++ ++A ++ ERI ++ Sbjct: 393 DVVLAGVAKAISSRLRGDDFLARYGGEEFVLLLPNTNLELAQRILERIRAHIETEEHTVA 452 Query: 457 ----KEIGFSSGIYAMKEND----TLHDAYKASDERLYVNKQNKNSR 495 I S+G A + L D +A+D LY+ K+ +R Sbjct: 453 PEHMIRITLSAGAAAHMDGSRISNKLDDLIRAADRALYLAKRQGRNR 499 >UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB67_9DELT Length = 752 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 6/175 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 + + + R+YQ++ +D +TGL N + LEQ ++G I D+D Sbjct: 570 VGVSMQNARMYQSMEERATTDGLTGLTNHRAFQERLEQLHALSERTGQKFSIILTDIDHF 629 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K +NDT GH GD + +A + RK D R GG+EF ++L D+ + AA R+ Sbjct: 630 KSVNDTYGHPVGDAVLKRVAAIFTRRARKVDIVARYGGEEFVLVLPDTDAEGAAVFANRL 689 Query: 447 EKRLQHIAPQK-----EIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 + + + S G+ + T H+ + +D+ LY K++ +R Sbjct: 690 REEIAAQTITSDNGSFSVTLSLGVAEFPRDSTKRHELIELADQALYYCKEHGRNR 744 >UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8J1_ALHEH Length = 689 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 2/160 (1%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + R+ +D++TG++NR + ++E + G+ + D+D K +ND GH+ Sbjct: 525 RRLKRQATTDSLTGVWNRYRMQEQIELERGAHERYGTPCSLLLFDIDHFKAVNDQYGHEA 584 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ- 456 GD + LA+A+ +R +D+ R GG+EF ++ +S P+ A L ER+ + + + Sbjct: 585 GDQVLVALARAVVGELRATDFLGRWGGEEFIVLATNSAPEEAWTLAERLRQCIAGLRFPG 644 Query: 457 -KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S G+ ++ DT+ +D +Y KQ +R Sbjct: 645 VGPVTISVGVASLSRGDTVDRLIDRADRAMYRAKQRGRNR 684 >UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Cyanothece RepID=B7JZG8_CYAP8 Length = 668 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 8/177 (4%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSG-SSVMFIAIDMDK 385 + + + +L + + +++ D +TGL+NR+ L + + L ++Q S+ I +D+D Sbjct: 483 IAIAFANLKLRETLEEQSLRDPLTGLFNRRYLEISINRELNTIIQDQDYSLGLIMLDIDH 542 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQ ND GH+ GDL + +A ++ IR+SD A R GG+EF IIL ++ + E+ Sbjct: 543 FKQFNDNFGHEAGDLVLQTVANCLQNHIRQSDIACRFGGEEFMIILPRASLNKTLERAEK 602 Query: 446 IEKRLQHI------APQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 I + ++ + P I S G+ A +N TLH+ + +D+ LY K+ R Sbjct: 603 IRESIKQLKIEYKSQPLDSITASFGVAAFPQNGTTLHELFIDADKALYQAKKQGRDR 659 >UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Y8_SULSY Length = 492 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 81/391 (20%), Positives = 157/391 (40%), Gaps = 18/391 (4%) Query: 120 IVEAAALLPAFDQAVEGNRHQDDYGS------GLGMAEEKFHYYLDLN--DRYVYFYEPV 171 I + D V H D E + +D N D VY Y P+ Sbjct: 99 IGFDRFIFTLPDGTVYLRMHNFDRYGDKISEIAEIANYENNYLSIDKNLLDSLVYLY-PI 157 Query: 172 NVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQN---VMSLLTPVYV 228 + + D+ F + K+N + S L+P Y Sbjct: 158 FLN--NKRVCDVYLNVPFYKISDDLANTFNKSYLFIIKKDFLNLKENKGYIQSDLSPDYF 215 Query: 229 AGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVS 288 +L N+ ++ + + + + S I + F + Sbjct: 216 VESKFYNQILKTKNNDSFSLSEINKKAKKEIDKKLREEVSFSYPIDINGNTILMTFMLIK 275 Query: 289 YVHDLPGGIRVSLSIDILY--FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENIS 346 +++ G +S D + F S + + + +I+ + +L ++ I+ Sbjct: 276 SFNNISIGYLISYEADTTFKVFSKSFYIMISSLLFIMIIINIFIINIIKLKNVAEKKAIT 335 Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL+NR I+ ++ +++ ++ + + D+D K+INDT GH +GD A+ +A Sbjct: 336 DKLTGLFNRSIIDTLIQVEIERAKRNNKPISILLFDIDHFKKINDTYGHDKGDYALKTIA 395 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSG 464 + ++++RKSDY +R GG+EF IL ++ A ++ E+I +++ + + S G Sbjct: 396 EIARRTLRKSDYVLRWGGEEFLAILPETDLDGATKVAEKIRSNIENYNFKDIGRVTVSIG 455 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + +K + L +A K +DE LY K +R Sbjct: 456 VTMLKIGEPLDNAIKRADEALYAAKNKGRNR 486 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 8/183 (4%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 + + ++ + + + +D +TG NR+ EQ L++ + G++V + Sbjct: 292 MGTIGIVTDITERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLM 351 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 ID+D KQ+ND GH GD A+ AI+ ++R+ D RLGG+EF +L ++T A Sbjct: 352 IDIDHFKQVNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGAL 411 Query: 441 QLPERIEKRLQHIA-------PQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNK 492 + ER+ + ++ IA P + S G+ + + + +D LY K Sbjct: 412 LVAERLRQAVEAIALPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKAEG 471 Query: 493 NSR 495 +R Sbjct: 472 RNR 474 >UniRef50_B1Y3T8 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3T8_LEPCP Length = 366 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 6/223 (2%) Query: 275 IINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHF 334 +I L Y L + + + F+T V+ AL Sbjct: 141 LIQAENAGLLPRPDYSVGLMQWVTYTALFGLASFLTYQGNQVVRR---ALARAEAEIEQR 197 Query: 335 RLYQ-NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTL 393 +L + +SR I+DA+TG++NR+ + K + + + + D+D K +ND Sbjct: 198 KLVEAELSRIAITDALTGVWNRRHFEQTIGAERAKAQRHHTPLSLLLFDVDHFKALNDQF 257 Query: 394 GHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI 453 GHQ GD +T LA+ + +S+R D R GG+EF +IL A +L E++ + Sbjct: 258 GHQAGDQVLTELARLVGRSLRDGDVLARWGGEEFAVILHHCPAADALRLAEKLRGLVAGH 317 Query: 454 APQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 A + S G+ ++ ++TL ++ D LY K + Sbjct: 318 AFDRVGTVTASFGVAELQPDETLDAWFRRVDLALYAAKSGGRN 360 >UniRef50_Q31GI5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GI5_THICR Length = 532 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 95/189 (50%), Gaps = 1/189 (0%) Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQ 367 F+ + ++ +L++ +R R + + + +D +TGL NR I L + ++ Sbjct: 336 FLQHLLINEFLLLIISLLVFFFIRNQIRQRRLLHKMAKTDNLTGLPNRSIFKRALNENIK 395 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 + + + I D+D K+INDT GH GD + +A+ I+ + D R GG+EF Sbjct: 396 RSNKKQWPLSLIFFDIDHFKKINDTYGHLVGDKVLKKVARNIEDGLTHKDIFARWGGEEF 455 Query: 428 CIILVDSTPQIAAQLPERIEKRLQHIA-PQKEIGFSSGIYAMKENDTLHDAYKASDERLY 486 I+L ++ Q A ++ ER+ ++L+ + I S G+ ++ +DT + DE LY Sbjct: 456 VILLPNTDLQDAEKVAERLRQKLEAMTDFDITITSSFGVSDLRPDDTAESFMQRGDEMLY 515 Query: 487 VNKQNKNSR 495 +K+ +R Sbjct: 516 RSKEQGRNR 524 >UniRef50_Q2W7A4 Response regulator n=4 Tax=Proteobacteria RepID=Q2W7A4_MAGSA Length = 634 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 6/172 (3%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 V RL + + ++SD MTGL NR+ L ++ + + + S++ + +D+D K + Sbjct: 448 VLETKRLMETLRESSLSDPMTGLNNRRFLEEYVDTLVANVHRRKSALTVMMLDLDHFKMV 507 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 NDT GH GD + L++ ++Q++R SD IR GG+EF I+LVD+ A Q+ E+I Sbjct: 508 NDTYGHDAGDAVLKALSKVLRQAVRASDLVIRFGGEEFLIVLVDTPSAEADQVAEKIRAL 567 Query: 450 LQHIAPQ-----KEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNSR 495 ++ + Q S G+ ++DT A K +D LY K+N +R Sbjct: 568 VEALVVQTGTVTIRKTISIGLSDFPTDSDTFWQAVKFADVALYQAKENGRNR 619 >UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NY46_9DELT Length = 525 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 20/253 (7%) Query: 261 LNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWI 320 + + + + ++ NQ + V P G +S + D F+ + K + + Sbjct: 270 QQLPDEHSFTWKVMVGNQPWAVNLLRIHDVEQRPVGYLISYAPDN--FLVALRKEFIVSL 327 Query: 321 LTALILLNMVRMHF----RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 L A +L + + F R + R +D +TGL NR+ L ++ + G+ V Sbjct: 328 LVAWLLAAGLGLLFVLLARSRDEMVRLATTDPLTGLANRRSFMDRLGLEQERFKRFGNPV 387 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 + +D+D K++NDT GH GD + A ++Q++R D RLGG+EF ++L + Sbjct: 388 GLLMLDIDFFKKVNDTHGHHVGDEVLGQFATLMRQNLRHVDLVGRLGGEEFAVVLPGADL 447 Query: 437 QIAAQLPERIE-------------KRLQHIAPQKEIGFSSGIYAMKENDT-LHDAYKASD 482 + R+ R A I S G+ ++ D + + +D Sbjct: 448 EGTLHFANRLRCGVGERLQGEVCGHRFSTSAGILNITVSIGVAVLQPGDDGVEPVLRRAD 507 Query: 483 ERLYVNKQNKNSR 495 LY K+N +R Sbjct: 508 TALYRAKENGRNR 520 >UniRef50_Q478M9 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q478M9_DECAR Length = 523 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 9/207 (4%) Query: 297 IRVSLSIDILYFITSSWKSVLFWILTALILLNM---VRMHFRLYQNVSRENISDAMTGLY 353 + + +T + V +L L++ +RM + + + D +TGL Sbjct: 311 AWYGRDVSSVIAVTGAGLGVALALLAWLMVTGRARALRMAAEMTEELRHMAQHDPLTGLP 370 Query: 354 NRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSI 413 NR + + L + L + + + +D+D K IND GH GDL + +A +K ++ Sbjct: 371 NRALFSDRLHKELARAKRHDGQFALVFLDLDHFKPINDNYGHAIGDLVLQQVALRLKDTV 430 Query: 414 RKSDYAIRLGGDEFCIILVD-STPQIAAQLPERIEKRLQH----IAPQKEIGFSSGIYAM 468 R+SD R+GGDEF +++ + + A L E+I + ++ Q +I S G+ Sbjct: 431 RESDTVGRIGGDEFVVLVPELAESDAALSLAEKIRQVIRQPFALDGRQLDISCSLGVAIY 490 Query: 469 KENDTLH-DAYKASDERLYVNKQNKNS 494 ++ K +DE +Y K + Sbjct: 491 PDDGIDEISLTKRADEAMYRAKDDGRD 517 >UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6W8_ALHEH Length = 382 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 86/163 (52%), Gaps = 6/163 (3%) Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 + R+ D +TGL+NR+ LT ++E+ + +++G + + D+D+ K+IND GH G Sbjct: 210 RLYRQATRDPLTGLFNRRALTEQIERERARFLRTGRPLTVLLFDLDRFKRINDHHGHLVG 269 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH------ 452 D + + A ++Q++R +D+ R GG+EF L ++T + A + ER+ + ++ Sbjct: 270 DRVLQVFANVVQQNLRTTDHFGRWGGEEFLAALPETTSEQARVVAERVRQACENERLTLA 329 Query: 453 IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 P S G+ + ++TL + DE LY K +R Sbjct: 330 EGPSLGFTTSIGVATLHRDETLDSLFNRVDEALYNAKAYGRNR 372 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 5/173 (2%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 ++ + + D++TGL NR+ +E+ L + +S + + +D+D+ K Sbjct: 275 RFLKELREAQEKLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRFK 334 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 +INDT GHQ GD ++ +++ +RK D R GG+EF ++L D++P A E+I Sbjct: 335 KINDTYGHQAGDAVLSEFGATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIR 394 Query: 448 K-----RLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + Q + S GI M+ ++T +D LY K + +R Sbjct: 395 AVTAATPIMFAGRQIAVTTSIGISMMQGDETAKAMIARADAALYEAKNSGRNR 447 >UniRef50_A6VEW2 Ggdef domain protein n=8 Tax=Pseudomonas RepID=A6VEW2_PSEA7 Length = 668 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 5/164 (3%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 ++ ++ ++D +TGL NR L+ LEQ + + + G ++ +D+D K+IND GH Sbjct: 501 LEDQRQKALTDPLTGLPNRAALSERLEQEVARRRRDGGELLLAVLDIDHFKRINDDFGHL 560 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 GD + ++A +++ +R++D+ R GG+EF ++L + QL ER+ + Sbjct: 561 AGDKVLKIIAGELRKRLRQADFIARFGGEEFVVLLPATPLDAGRQLLERLRAAIAACPFH 620 Query: 457 -----KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 I S+GI A N+ A++ +D+ LY K+ R Sbjct: 621 FKGEPLSITCSAGITAFVGNEAGEAAFERADQALYRAKRAGRDR 664 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 +T +I + + R + + R D +T L NR+ ++ +++ + GS + + Sbjct: 195 ITRIIAIALQRDGH--EKQLYRLATQDGLTELNNRRQFIELADREIERSRRHGSRMSVLM 252 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 +D+D K IND GH GD I +Q ++ +R SD RLGG+EF +L D+ A Sbjct: 253 MDLDHFKDINDHYGHAVGDEVIRHFSQVCREVLRASDLCGRLGGEEFAAVLPDTGLDDAR 312 Query: 441 QLPERIEK-----RLQHIAPQKEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNS 494 Q+ ER+ RL ++ S G+ ++T + + +D++LY K++ + Sbjct: 313 QVAERLRSLASSARLSAVSGSLGYTVSIGVAERHADETDIDEVLGRADKQLYQAKRDGRN 372 Query: 495 R 495 R Sbjct: 373 R 373 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 6/167 (3%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 L + + + D +TGLYNR+ ++ + V+ + +D+D K+INDT G Sbjct: 153 HLNEELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRREKPSTALMLDIDHFKRINDTYG 212 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR----- 449 HQ GD I +LA IK+ +R++D A R GG+EF IIL DS+ + A + ERI + Sbjct: 213 HQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSSVEDAKIVAERIRQLAQRLV 272 Query: 450 LQHIAPQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 ++H S G+ + + +D+ LY K+N ++ Sbjct: 273 VEHEGESISFTVSLGLAQFSPDFKGAMAWLECADQALYEAKENGRNQ 319 >UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLJ7_9GAMM Length = 478 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 33/314 (10%) Query: 196 IEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRP 255 + + +G ++ + + +T + A + L + Sbjct: 162 LPQGGSGFIAHKPLFDREGLETKFWGFITVIIDADAFFDEISL-------------LPQD 208 Query: 256 LLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGG-----IRVSLSID---ILY 307 L R+ V R I ++ +PGG RV I+ + + Sbjct: 209 NLARYRIVAKNIQSDQRQAIFGNHTVESTPDLTAPIAIPGGSWQLEARVKPDINAHGVPH 268 Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQ 367 + W + AL V M RLYQ +++D++TGLYNR+ EQ Sbjct: 269 ALLDLWGMLASLTFGALSAYTCVLMR-RLYQR----SVTDSLTGLYNRQHFKFRAEQEAS 323 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 + V+ + + ID+D+ KQIND GHQ GD + +Q I+ ++R+SD R GG+EF Sbjct: 324 RAVRYNQPLTMLMIDIDQFKQINDKFGHQTGDTVLQQASQYIRDNLRESDLLGRYGGEEF 383 Query: 428 CIILVDSTPQIAAQLPERIEKRLQH----IAPQKEIGFSSGIYAMKENDTL--HDAYKAS 481 ++L S + A Q +RI L I S G+ DT + + Sbjct: 384 IVLLPQSDLEQATQCADRIRDSLDKSIFIYGSLVSISVSVGLAQQSP-DTFVYDELVSQA 442 Query: 482 DERLYVNKQNKNSR 495 D+ LY K+N +R Sbjct: 443 DQALYTAKRNGRNR 456 >UniRef50_D1U9W6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9W6_9DELT Length = 366 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +L V R+ + + R +D+MTG++NR + L + +SG + I +D+D Sbjct: 168 VLVDVTERKRMIEEMCRLARTDSMTGMWNRGYFMELAGRELNRARRSGGELSLIMLDVDH 227 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K INDT GH GD+A+ LA+ I +S+R+ D A RLGG+EF ++L D++ + A + R Sbjct: 228 FKAINDTHGHDVGDVALMELARVIGESVREVDVAARLGGEEFAVMLPDTSAEDACAVAVR 287 Query: 446 IEKRLQHIAPQK-----EIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 I + ++ + S G+ + +E+ D+L K SD LY K+N R Sbjct: 288 IARTIRRAVVDSPRGPVSMTVSMGLASFEESKDSLDSLLKYSDIALYAAKKNGRDR 343 >UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geobacter RepID=Q39S35_GEOMG Length = 686 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 8/164 (4%) Query: 340 VSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGD 399 + + +I+D +TGLYNR+ L +E+ L + ++ S+ + ID+D K ND GH GD Sbjct: 499 LEQLSITDPLTGLYNRRFLKRRMEEELARSIRQNLSLTVMLIDLDNFKIYNDLCGHLAGD 558 Query: 400 LAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL-------QH 452 A+ +A+ + + R+ D R GG+EFCIIL ++ + + + ERI + + + Sbjct: 559 RALKKMARILSDTARQMDVVTRYGGEEFCIILPGTSKKESLFVAERIRREIEGEEFSHEE 618 Query: 453 IAPQKEIGFSSGIYAMKENDTLHD-AYKASDERLYVNKQNKNSR 495 PQ + S G+ + E+ + KA+D LY K +R Sbjct: 619 NLPQGRLTASIGVSSFPEDGNVEAVLVKAADVALYRAKSEGRNR 662 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 8/174 (4%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 V RL Q + R +D +TGL NR+ + +++ V+ + + ID+D K + Sbjct: 283 VTESHRLRQELERLATTDPLTGLSNRRAFLMRAREEVERAVRHDRPMSVVMIDVDHFKSV 342 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKS-DYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 ND GH GDL + +A ++ ++R S D A R GG+EF ++L ++T A QL ERI Sbjct: 343 NDRYGHDIGDLVLQDVAATVQGALRNSGDVAARFGGEEFVLLLPETTVSGAQQLAERIRV 402 Query: 449 RLQHIAPQKE-----IGFSSGIYAMKENDT--LHDAYKASDERLYVNKQNKNSR 495 + A + E S G+ + + + K +D+ LY K+ +R Sbjct: 403 AFERTAVETEQGAVRFTASFGVDVFRSDMDTGIDTVLKRADDALYRAKEAGRNR 456 >UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AV70_SYNWW Length = 459 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 131/272 (48%), Gaps = 13/272 (4%) Query: 235 IVLLDINKNNLRNIFYTHDRPLLWRFLNV---TLTDTDSGRDIIINQSEDNLFQYVSYVH 291 + LD+N++ L + ++ D + + +++ +++++ + + ++ ++ Sbjct: 187 SIYLDVNESFLNTLGFSRDEVIGHSCSELGILSISQKKEIQEMLLKKGKIRNWE-SKFIA 245 Query: 292 DLPGGIRVSLSIDILYFITSSWKSVLFWILTALI-----LLNMVRMHFRLYQNVSRENIS 346 + LS+D++ ++F +T I L + L + + + I+ Sbjct: 246 KAGEEVPGLLSVDLIQLRDKKLLLMVFHDITERIRMKEELEEKNQQLRELNRILQVQAIT 305 Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D++TGLYN + + +L+ + + + + + +D+D K IND GHQ GD+ + +A Sbjct: 306 DSLTGLYNHRQVLEKLQLEIARANRYQQELTIMMLDIDHFKSINDEFGHQVGDVVLVEVA 365 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE---IGFSS 463 Q IK+++R D A R GG+EF IIL + Q+ ERI ++++ + I S Sbjct: 366 QIIKRNLRNIDIAGRYGGEEFLIILPQTNLNNGRQVGERIRRQVEIEGFEDSKEGITVSI 425 Query: 464 GIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 GI + + + D + +D+ LY K+ +R Sbjct: 426 GISQ-HQGEEMVDYIERADQLLYRAKRKGRNR 456 >UniRef50_Q1NSC4 GGDEF:GAF n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NSC4_9DELT Length = 376 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 4/171 (2%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 LL M + R Y+ S E D +TGL NR+ L ELE+ + SS+ I +D+D Sbjct: 204 LLGMAITNARRYEEKSAEAGQDVLTGLANRRQLNTELERDWATAQREKSSLAVIMLDLDH 263 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQ NDT GH GD + + Q ++ +R D +R GG+EF ++L + A + ER Sbjct: 264 FKQYNDTHGHLAGDRLLREMGQIMRDCVRCEDLPVRYGGEEFLVLLRRAGDARAEAVAER 323 Query: 446 IEKRLQHIAPQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + + + + E+ S G+ +ND + +DE LY KQ +R Sbjct: 324 LREAVAA---RTEVTVSLGVAGSNQNDHDPWQMVQRADEALYQAKQQGRNR 371 >UniRef50_A4XPL1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPL1_PSEMY Length = 557 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 6/174 (3%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 +R L++ + + + D +TGLYNR+ L + L + + + ID+D K Sbjct: 369 ERLRTISNLHEQLREQALCDPLTGLYNRRYLDEFFSRELARAQRENLPLALALIDLDHFK 428 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 ++ND GH GD + +A+ + ++R +D R+GG+EF +IL P A + + I Sbjct: 429 RLNDECGHLVGDDVLKAVAKHLLDNLRSTDAVFRIGGEEFLLILPGVDPVEACERLQNIC 488 Query: 448 -----KRLQHIAPQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + + +++ S+G+ + L + A+D LY K+ +R Sbjct: 489 SQLAGQSIATRGGDQQVTLSAGLAHWPQQGVVLEELLHAADAALYQAKRGGRNR 542 >UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXI5_MARAV Length = 523 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 7/187 (3%) Query: 316 VLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSS 375 V+ W+ ++ + + L + R + D++TGL NR+ + +S Sbjct: 331 VISWVYQSVEKIGITLSGLALRAELQRFSYEDSLTGLKNRRYFDELFRHEREVSARSDRP 390 Query: 376 VMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDST 435 + + D+D K ND GH+ GD A+ ++ + R SD R GG+EF +++ ++ Sbjct: 391 LCLLIFDIDHFKLFNDCHGHEAGDQALRMVGDVLATCFRGSDTVCRYGGEEFSVLMPGAS 450 Query: 436 PQIAAQLPERIEKRLQHIAPQK------EIGFSSGIYAMKEN-DTLHDAYKASDERLYVN 488 A Q E++ + + + S+GI +EN + ++A+D+ LY Sbjct: 451 LDEARQRAEQLRAAISAEPVEHRGENLGSLTISAGIACWRENCPEFDELFRAADQALYQA 510 Query: 489 KQNKNSR 495 K+ +R Sbjct: 511 KETGRNR 517 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 6/178 (3%) Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 +++ + V R + + R +D MTG++NR+ ++ + + G + + ID+ Sbjct: 145 MLIYSDVTDIVRNAEELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMIDI 204 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 D K IND GHQ GD I LA+ + R D R+GG+EF ++L ++ A + Sbjct: 205 DHFKSINDDFGHQVGDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAVA 264 Query: 444 ERIEKRLQH-----IAPQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 ER+ + + S G D + D +A+D LY K +R Sbjct: 265 ERLRGEVAASSLLMASGSVRATVSIGAATSAATIDGISDLMRAADRALYEAKHGGRNR 322 >UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC96_DESAH Length = 1268 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 5/192 (2%) Query: 306 LYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQR 365 L+ + +LFW L R + + +++D +TGLYNR + L + Sbjct: 1075 LFITALLFSGILFW---NRKLSAFNRQMAEANAKLEQLSVTDRLTGLYNRMKIDDTLLEE 1131 Query: 366 LQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGD 425 + ++++ + I +D+D KQ+NDT GHQ GD + +A+ + ++IR +D R GG+ Sbjct: 1132 IGRVLRYNYPLSLILMDIDLFKQVNDTHGHQAGDAVLIQMAKTMDKNIRSTDICGRWGGE 1191 Query: 426 EFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEI--GFSSGIYAMKENDTLHDAYKASDE 483 EF +I + + A L E + + + I S G+ D+ D +D Sbjct: 1192 EFMVICPHTDLKGALSLAEHLRESIARQIFPHVITQTGSFGVAQYGNGDSEADLIARADR 1251 Query: 484 RLYVNKQNKNSR 495 +Y+ K+ +R Sbjct: 1252 AMYLAKEGGRNR 1263 >UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter sp. M18 RepID=C6MUF5_9DELT Length = 739 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 9/213 (4%) Query: 291 HDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMT 350 + + G I +S ++ F + + + + A + + + + + +++DA+T Sbjct: 490 YKIIGVINLSDKKNLTPFTEADLRVLTSFANLASLTIERTEV-LEESERFEQLSVTDALT 548 Query: 351 GLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIK 410 GLYNR+ L LE+ L + ++ G ++ I ID+D K ND GH GD A+ + A IK Sbjct: 549 GLYNRRFLKSRLEEELNRSIRQGLNLTVIFIDLDFFKNFNDLCGHLAGDEALKITADIIK 608 Query: 411 QSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-------PQKEIGFSS 463 S+R+ D R GG+EFC +L ++ A + ERI ++ PQ + S Sbjct: 609 ASLREMDIVARYGGEEFCAVLPGTSKAEAMIVAERIRSEIEKEKFPGEKDIPQMRLTASL 668 Query: 464 GIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 GI + E+ T +SD LY K + +R Sbjct: 669 GIASFPEDGRTFTTLVHSSDVALYEAKASGRNR 701 >UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9S7_SPHTD Length = 1765 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 6/174 (3%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 + + RL+ V R ++D +TG YNR+ L E+ L + + + I +D+D+ K Sbjct: 1588 GVAIENARLFAEVQRLAVTDDLTGTYNRRHLLTTAERELSRAQRFNRPLAAIILDIDEFK 1647 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 ++ND GH GD + +A ++ +R+ D R GG+EF IIL ++ A Q+ ER+ Sbjct: 1648 RVNDAHGHAVGDEVLRAVADRLRSGLREVDVLGRYGGEEFVIILPETDLISAYQIAERLR 1707 Query: 448 KRLQHIAP-----QKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + + S G+ A D+ LY K+ +R Sbjct: 1708 NSIAAEPIATSTGPVSVTISLGVAAADPTTPDFASLLSRIDDLLYTAKRRGRNR 1761 >UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZW4_HYPNA Length = 455 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 11/171 (6%) Query: 336 LYQNVSR---ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDT 392 L Q V R ++ D +TGL+NR+ + +LEQ +Q+ + + + D+D K +NDT Sbjct: 279 LRQRVDRGLELSVIDQLTGLHNRRYMNGQLEQFMQRAARGNQPLSLMMTDIDHFKAVNDT 338 Query: 393 LGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH 452 GHQ GD + + + ++ ++R +D R GG+EF +++ ++ +A ERI K + Sbjct: 339 HGHQAGDDVLREIGKRLRANVRPTDVVCRTGGEEFVVLMPNTPGDLACAAAERIRKAVAA 398 Query: 453 I-------APQKEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNSR 495 + I S+G+ ++ DT D +D LY K +R Sbjct: 399 EEFPVLGGSQNLRITVSAGVSTLQGAGDTTDDLMHRADTALYQAKTGGRNR 449 >UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID=Q2T680_BURTA Length = 506 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 108/232 (46%), Gaps = 20/232 (8%) Query: 284 FQYVSYVHDLPGGIRVSLSIDILY---------FITSSWKSVLFWILTALILLNMVRMHF 334 F + +P ++V+++ D +Y F + L +++ + L + + Sbjct: 268 FYLYRRLDGVPLVVQVAIADDDIYATWRVRAWRFGVVTGVFALIFVVMSAYLAHSLWRKS 327 Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 ++R +D++TGL+NR+ L LE+ ++ V + + +D+D K+ NDT G Sbjct: 328 TAEAALARLAGTDSLTGLHNRRALDETLEREWRRAVGGERPLAILFVDIDHFKRYNDTYG 387 Query: 395 HQEGDLAITLLAQAI-KQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI 453 HQ GD + +++ I +Q+ R D R GG+EF ++L D+ A + ER+ ++ + Sbjct: 388 HQVGDEVLATVSRCIAQQAARLGDVVARYGGEEFVVVLPDTPRGGALVVAERVRLGVRML 447 Query: 454 APQKE------IGFSSGIYAMKENDT----LHDAYKASDERLYVNKQNKNSR 495 + E + S G+ + + + +A+D+ LY K +R Sbjct: 448 GIEHEGSEVGFVTVSVGVAVWQPDGARAPHIAAIVEAADQALYQAKAAGRNR 499 >UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8Q2_9ALTE Length = 379 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 5/197 (2%) Query: 304 DILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELE 363 ++ F+ + ++ + L + R F Q + +D +TGL NR + LE Sbjct: 165 QLIPFLFDPLVMIFLGMVVSGSLSQLRRSEFLSRQQLKSLASTDQLTGLLNRHAIHKSLE 224 Query: 364 QRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLG 423 Q + + + G I D+DK K++ND+ GH GD + A ++ +R D R G Sbjct: 225 QLVARHARHGHPFSLILGDLDKFKRVNDSYGHNVGDEVLIETANRLQDHVRAGDILCRWG 284 Query: 424 GDEFCIILVDSTPQIAAQLPERIEKRLQHI-----APQKEIGFSSGIYAMKENDTLHDAY 478 G+E ++L D+ A + E++ + E S G+ + + Sbjct: 285 GEELLVVLPDTERDSALAVAEKLRCAIGEAPMTAGGHSIEQTISFGVTCYHNGEHIDTTI 344 Query: 479 KASDERLYVNKQNKNSR 495 +D LY+ KQ +R Sbjct: 345 MRADSALYLAKQGGRNR 361 >UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NS82_9VIBR Length = 385 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 9/245 (3%) Query: 260 FLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFW 319 F+ + DI ++ +L ++L I I F+ S L + Sbjct: 136 FIAILANQKGKSTDITPSKFLLSLGLATQGGYNLFRFIWTLFEERIDDFMISGMAHQLAF 195 Query: 320 ILTALILLNMV-----RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGS 374 + T L+++ + + RL + +I D +T LYNR+ L L + + + + Sbjct: 196 VSTLLMVIFIGFSVTWMLTGRLVATIYDTSIKDELTQLYNRRALEELLPKEIARSSRHKQ 255 Query: 375 SVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDS 434 + + +D+D K++NDT GHQ GD + + + RK D + R GG+EF ++L ++ Sbjct: 256 PLSVLLLDIDHFKKVNDTYGHQAGDRVLRTTGKLLILQTRKDDLSFRYGGEEFLVLLPNT 315 Query: 435 TPQIAAQLPERIEKRLQHI----APQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQ 490 + A + E++ + ++ S G+ D A + +D+ LY K+ Sbjct: 316 DVEKAVIVAEKLREAIKRARMLPTNVDSCTASFGVTQFNGEDDWQTAIERADQALYSAKE 375 Query: 491 NKNSR 495 N ++ Sbjct: 376 NGRNQ 380 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 5/184 (2%) Query: 317 LFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 +F L + R+ L Q ++ +D +TGL NR+ L LE + ++G + Sbjct: 176 IFAGLAEYTRRHTQRLLILLTQQLAESARTDELTGLANRRALCERLEYEQVRARRTGRPL 235 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 D+D K +ND GHQ GDL + +A + ++R D R GG+EF ++L ++ Sbjct: 236 SIAICDIDHFKSVNDCYGHQCGDLVLQSVAGLLHDNLRHQDTICRWGGEEFLLLLPETDE 295 Query: 437 QIAAQLPERIEKRLQHI-----APQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 AA+L E++ ++ + + S G++ + + +D++LY+ K+ Sbjct: 296 AGAARLAEKLRSLVEAMEYSYHGIPVSVTLSFGVHTCGPEGDIDYHIRKADQKLYLAKEQ 355 Query: 492 KNSR 495 +R Sbjct: 356 GRNR 359 >UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D095_MYXXD Length = 347 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 12/177 (6%) Query: 331 RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIN 390 + + + +DA+TGL NR+ L + + G+ + + +D+D K+IN Sbjct: 165 KELAARREELLALTRTDALTGLSNRRAFEERLNDEFARSRRYGAPLSLVMLDIDHFKRIN 224 Query: 391 DTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 D+ GH GD + +AQ + +R+ D R GG+EF +L ++ P A ++ ER+ + Sbjct: 225 DSFGHPFGDHVLKAVAQTARARLREVDLLARYGGEEFIALLPETGPADALRVCERVRDAI 284 Query: 451 QHIAPQK----------EIGFSSGIYAMKEND--TLHDAYKASDERLYVNKQNKNSR 495 + + + S G+ + D + +A+D LY K +R Sbjct: 285 AALELEHVGGSGKPQCVRLTASLGVATVPSGDLPSAEALLRAADASLYAAKGAGRNR 341 >UniRef50_Q2IXE2 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Alphaproteobacteria RepID=Q2IXE2_RHOP2 Length = 457 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 13/271 (4%) Query: 238 LDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQS-EDNLFQYVSYVHDLPGG 296 +D+ N +F+ + +++ L + D R +S E + + D Sbjct: 181 IDVEPNPSEALFHAAEGNYDLLIVSLGLENFDGLRLCSQARSLERTRHVPILAIADADNN 240 Query: 297 IRVSLSIDI---LYFITSSWKSVLFWILTALILLNMVRMHFR-LYQNVSRENISDAMTGL 352 R+ ++I Y + K+ L I H R Q+ I+D +TGL Sbjct: 241 ARLLRGLEIGVNDYLLRPVDKNELLARARTQIRRRRYTDHLRDNVQHSIEMAITDGLTGL 300 Query: 353 YNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQS 412 +NR+ + L ++ G + + +D+D K INDT GH GD + A IK+S Sbjct: 301 HNRRYMESHLATLAEQAGSRGKPLALMILDIDFFKAINDTYGHDAGDDVLREFAVRIKKS 360 Query: 413 IRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE-------IGFSSGI 465 IR D A R GG+EF I++ ++ Q+A + ER+ + + E + S G+ Sbjct: 361 IRGIDLACRYGGEEFVIVMPETDLQVAQMVAERLRRAIAGEPFAIEKGTKRIAVTISIGL 420 Query: 466 YAM-KENDTLHDAYKASDERLYVNKQNKNSR 495 + ++ + + D K +D LY K + +R Sbjct: 421 STLERKGEAVRDLLKRADTALYRAKHDGRNR 451 >UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y4_AMMDK Length = 615 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 10/205 (4%) Query: 296 GIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNR 355 G S +F + +S+ ++ ++ + RL + R ++ D +T LYNR Sbjct: 387 GWVRVGSRQPYFFDAETKRSIEGYVSITAAMIA----NLRLSELNRRLSLIDPLTQLYNR 442 Query: 356 KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK 415 + L L ++ + + + ID+D+ K +ND GH+ GD+A+TLLAQ IKQ++R+ Sbjct: 443 RFLEEYLTHQVVEAQRLNRPFSILFIDVDQFKNVNDFYGHEVGDIALTLLAQTIKQNLRE 502 Query: 416 SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE------IGFSSGIYAMK 469 +D +R GG+EF +L + + AAQ E++ + + E + S G+ + Sbjct: 503 ADAVVRYGGEEFIAVLPGTDLEGAAQAAEKVRRAVAETPICLESGENIFLTVSIGVAQYR 562 Query: 470 ENDTLHDAYKASDERLYVNKQNKNS 494 + + +DE +Y K + Sbjct: 563 IGLNPEEVIQRADEAMYQAKIKGKN 587 >UniRef50_D1SQW2 Diguanylate cyclase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SQW2_9BURK Length = 407 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 30/217 (13%) Query: 310 TSSWKSVLFWILTALILLNMVRMHFRLY-----------------QNVSRENISDAMTGL 352 SS SV + I+TA++LL + RL +++ D +TGL Sbjct: 174 HSSGLSVAYGIMTAVVLLGSTFLTTRLQATREDLRRQKHDLARALEHIRELATHDELTGL 233 Query: 353 YNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQS 412 NR+ + + +++ +S ++ +D+D K +NDT GH GD + AQA+++ Sbjct: 234 LNRRHMLELMRLEQRRVSRSDFPLVIALLDVDHFKAVNDTHGHAAGDRVLQAFAQAVRRC 293 Query: 413 IRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP-------------QKEI 459 +R D R GG+EF ++L ++ P+ A L ER+ + + ++ I Sbjct: 294 VRDGDVISRWGGEEFVLMLCNTPPEAARALLERVREAVAALSVPADRGDGAGASAGHLRI 353 Query: 460 GFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 S G + + + + +D LY K +R+ Sbjct: 354 TVSIGFALHRPRHPIEETLERADRALYAAKLGGRNRT 390 >UniRef50_Q4KKJ4 Diguanylate cyclase, putative n=5 Tax=Pseudomonas fluorescens RepID=Q4KKJ4_PSEF5 Length = 727 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 5/164 (3%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 + ++ + D +TGL NR + LE + + Q G+S++ +D+D K+IND GH Sbjct: 560 LEEQRQKALIDPLTGLPNRAAWSERLEHEVGQWQQHGNSLLLAMLDLDHFKRINDNYGHL 619 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 GD + ++A +++ +R SD+ R GG+EF ++L ++ + ++ E + ++ Sbjct: 620 AGDKVLKIIANVLRKRLRGSDFIARFGGEEFVLLLPNTPWPVGVRIVEALRAAIEACPFH 679 Query: 457 KE-----IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + I S G+ A K D K +D+ LY K +R Sbjct: 680 FKGEPVTITVSVGLSAFKAGDRSDLVIKRADQALYRAKDAGRNR 723 >UniRef50_A0L7G7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7G7_MAGSM Length = 476 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 5/178 (2%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 ++ + + H R + +D +TG+ NR L L +Q+ + G + I Sbjct: 267 LVFTFADIASIESHMR---KLEEIAFTDGLTGVANRASLQQILNAEMQRSRRHGGTFSII 323 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 D+D KQ+ND GHQ GD + LLA I ++R +D R GG+EF ++ + + A Sbjct: 324 LFDIDHFKQVNDNFGHQVGDDVLRLLASTIADNLRATDTIARWGGEEFMVVCPEINIEAA 383 Query: 440 AQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +L E++ + ++HI K+I S G+ ++ND + +D LY K+ +R Sbjct: 384 HRLAEKLRQLIEHITFPEVKQITSSFGVTQFQKNDQSRSLTQRADCALYRAKEGGRNR 441 >UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYG3_9DEIN Length = 354 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 5/190 (2%) Query: 311 SSWKSVLFWILTALILLNMVRMHFRLYQNV---SRENISDAMTGLYNRKILTPELEQRLQ 367 S+ S+ + L L L ++ ++ +L +N+ + +D +T L NR+ L P L+Q LQ Sbjct: 153 SALNSIAQFYLANLAFLALLNVYAQLRENMLIMEQLAHTDHLTRLTNRRGLEPLLKQELQ 212 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 + + G + D+D K++ND GH GD + +A + ++R++D R GG+EF Sbjct: 213 RAERYGLPFAVLLADLDHFKEVNDRHGHAIGDQVLREVAPRLDHNLRQADTVARWGGEEF 272 Query: 428 CIILVDSTPQIAAQLPERIEKRL--QHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERL 485 I+ + A QL ER+ + + + + + S G+ + D+L + +DE L Sbjct: 273 LILAPTTDLAQAGQLAERLIEVIRSEPVVGSIPVTISIGVSCYRAGDSLESLLQRADEAL 332 Query: 486 YVNKQNKNSR 495 Y K +R Sbjct: 333 YRAKALGRNR 342 >UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIT1_HALO1 Length = 732 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 121/297 (40%), Gaps = 12/297 (4%) Query: 208 SIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTD 267 +IY+ +R + V S+ A + L D+ + + + + L D Sbjct: 424 TIYEPERKRHRVYSVRVSDEDAPLIDPESLADLEFRDNTGLAAMVVKNKHYLPAGGELRD 483 Query: 268 T--DSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALI 325 + + ++L D G + S + F + + I+ + Sbjct: 484 LTAPVYTKQVRLKEAESLLVLPLLSGDEAIGTFMLASRERQQFGKDVRE--MLGIIANQV 541 Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +++ + +Y+ + +D +TGL N + L Q L + ++ + D+D Sbjct: 542 AVSL--QNGMMYKTMETMATTDGLTGLTNHRTFQDRLVQLLDRAERTRQPAAILLCDVDH 599 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K +NDT GH GD + +A + +S+RK D R GG+EF ++L + + A L ER Sbjct: 600 FKNVNDTYGHPIGDEVLRQVAGVLLRSVRKIDIPARYGGEEFAVVLEATDLEGAMNLAER 659 Query: 446 IEKRLQHIAPQK-----EIGFSSGIYAMKENDTLHD-AYKASDERLYVNKQNKNSRS 496 I K + + ++ S GI + ++ T + +D LY+ K++ +R Sbjct: 660 IRKDVAALVVDSDKGPFQVTMSIGIASFPDDATDRAVLIERADSALYLAKESGRNRC 716 >UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geobacter RepID=C6E9C6_GEOSM Length = 713 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 9/211 (4%) Query: 293 LPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGL 352 + G + +S ++ F + + + + A +++ + + + +++DA+TGL Sbjct: 463 IIGVLNLSDKKNLAPFTDADLQVLTSFANLASLMIERTEV-LEESERFEQLSVTDALTGL 521 Query: 353 YNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQS 412 YNR+ L LE+ L + ++ G ++ I ID+D K ND GH GD A+ + A+ IK S Sbjct: 522 YNRRFLKNRLEEELNRSIRQGLNLTVIFIDLDFFKNYNDLCGHLAGDDALRITAEIIKAS 581 Query: 413 IRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-------PQKEIGFSSGI 465 +R D R GG+EFC +L ++ A + ERI ++ PQ + S G+ Sbjct: 582 LRDMDIVARYGGEEFCAVLPGTSKVEAMIVAERIRSEIEREKFPGESEIPQVRLTASLGV 641 Query: 466 YAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + E+ T ASD LY K +R Sbjct: 642 ASFPEDGRTFTALVHASDVALYEAKAGGRNR 672 >UniRef50_C4XRL8 GGDEF domain protein n=2 Tax=Desulfovibrio RepID=C4XRL8_DESMR Length = 434 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 2/175 (1%) Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 L++L V + + D +T NR+ L LE + + + +D Sbjct: 248 CLLMLADVTELELERRELLDLANRDPLTRTLNRRKLGDVLEAETARAARYATPFSLALLD 307 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K IND+ GH GD + LA+ I S+R+ D R GG+EF + AA+L Sbjct: 308 IDHFKHINDSHGHDAGDAVLVELARRITASLRQVDRLARFGGEEFVVAAPGIDLAGAAEL 367 Query: 443 PERIEKRL--QHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ER+ + + + A + S G+ A + D D K +D LY K +R Sbjct: 368 AERLRRAVADEPFAGVGRVTASFGLAAWRPGDKPEDLIKRADAALYRAKDGGRNR 422 >UniRef50_B8FL29 Response regulator receiver modulated diguanylate cyclase n=5 Tax=Bacteria RepID=B8FL29_DESAA Length = 593 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 7/183 (3%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 I TAL + + + + +I+D +TGL NR+ ++ +QK +GS + Sbjct: 407 IATALEKARLRKETRLAQEKIVDMSITDELTGLSNRRYFNEVVDIEVQKARNNGSPLTLC 466 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 +D+D K +NDT GH GD + +KQ R D R GG+EF +IL D+ + A Sbjct: 467 MMDLDHFKNVNDTYGHLTGDKVLAETGALLKQGFRSHDMIFRYGGEEFAVILPDTDLEHA 526 Query: 440 AQLPERIEKRLQHI-----APQKEIGFSSGIYAMKENDTLH--DAYKASDERLYVNKQNK 492 + ER + +Q Q +I S GI M + + A+D LY K+ Sbjct: 527 KRACERFRESVQEHVMDAKVKQVKITISIGIANMPGEQIMEAGELIDAADHALYRAKELG 586 Query: 493 NSR 495 +R Sbjct: 587 RNR 589 >UniRef50_C6WY37 Diguanylate cyclase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WY37_METML Length = 395 Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 12/206 (5%) Query: 296 GIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNR 355 G+ V+ SI+ L F+ +S F + L+L+ ++ RL +V + DA+TG NR Sbjct: 183 GLHVNTSINTLPFVVASLLE--FSVAFGLLLM----LNHRLIADVYQMASRDALTGAMNR 236 Query: 356 KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK 415 + + E + + +++G + + ID+D K IND GH GD + +A ++SIR Sbjct: 237 RRIEEEAVRLRARCIRTGEPLAIMMIDIDFFKSINDRYGHPAGDKVLRAIADIAQKSIRA 296 Query: 416 SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-----PQKEIGFSSGIYAMKE 470 DY R GG+EFC++L +T A L ER+ Q I S G+ Sbjct: 297 EDYFARYGGEEFCMLLTSTTESEALDLAERLRLAFAEFTLTLGKEQLNITVSIGVADSSM 356 Query: 471 -NDTLHDAYKASDERLYVNKQNKNSR 495 D A+D+ LY K+N +R Sbjct: 357 VGLEFADMVTAADKALYCAKENGRNR 382 >UniRef50_Q2BQN9 Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQN9_9GAMM Length = 529 Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 5/163 (3%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 + +D +TGL NR ++ Q ++ + +S + D+D K+INDT GH Sbjct: 362 MEEERLRARTDPLTGLPNRAAYDEQIAQEYERWSRYRTSFSVVVADLDFFKKINDTYGHL 421 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 GD + L+A+ I ++IR +D+ R GG+EF I+L + + AAQ +++ + L Sbjct: 422 AGDKVLRLVAKVITKNIRVTDFVARYGGEEFVILLPSTVAEEAAQAMDKLRESLASSPFN 481 Query: 457 KE-----IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 I S G+ +KE D+L D + +DE LY K++ + Sbjct: 482 FHGKPVGITMSFGVTEIKEGDSLDDVFTRADEALYQAKEDGRN 524 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 18/202 (8%) Query: 313 WKSVLFWILTALILLNMVRMHFRLYQ-------------NVSRENISDAMTGLYNRKILT 359 W S++F + A +L R+ F Q + D++T L NR+ Sbjct: 795 WLSIIFALGLAATILVRARIRFLNNQRAQLELMVAEKTKELKGLARQDSLTQLGNRRAFD 854 Query: 360 PELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYA 419 +L+ ++ +S + ID+D K IND H GD + L+ + +R DY Sbjct: 855 EQLQYEFKRCERSEQPLSLAIIDVDHFKSINDRFLHVIGDQVLIELSALLSNMLRDIDYI 914 Query: 420 IRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ-----HIAPQKEIGFSSGIYAMKENDTL 474 R GG+EF +++ ++T + A Q ERI +R++ H+A + + S G+ + + Sbjct: 915 ARWGGEEFALLMPETTAKEALQAAERIRQRIEDTSYQHLADELAVTVSIGVASSEHYPNH 974 Query: 475 HDAYKASDERLYVNKQNKNSRS 496 A+D+ LY KQ+ +R+ Sbjct: 975 SALLVAADKALYKAKQSGRNRT 996 >UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQK2_CHRVO Length = 585 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 87/168 (51%), Gaps = 3/168 (1%) Query: 331 RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIN 390 R+ + +++ +DA+TGL+NR +L++ + +SG+ + +D+D K++N Sbjct: 410 RLLVQKAAQLAQLARNDALTGLHNRMAANEQLQEEHLRHGRSGAPYAVLLLDVDHFKRVN 469 Query: 391 DTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 DT GH GD + +A ++++ R +D+ R GG+EF ++L ++ AA L E+I + Sbjct: 470 DTHGHDAGDRVLRHIADILRRAARATDFVARFGGEEFLLLLPETDADGAAVLAEKIRASV 529 Query: 451 Q--HIAPQKEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 + + S G+ + D+ A K +D+ LY K +R Sbjct: 530 EQSQAPDVGRVTLSIGLATVVPADSQPEMAVKRADQALYRAKAAGRNR 577 >UniRef50_A3QI98 Diguanylate cyclase n=1 Tax=Shewanella loihica PV-4 RepID=A3QI98_SHELP Length = 401 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 7/201 (3%) Query: 301 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP 360 SI I W V+ + +I++ RL Q + ++ D +TGL+NR+ + Sbjct: 187 ASIQSADAIPMLWLYVVMTLWINVIMMGNALT--RLVQKMRQQADRDYLTGLWNRRAMQQ 244 Query: 361 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI 420 +LEQ Q+ ++ G + I D+D KQIND GH GD + AQ I + R D Sbjct: 245 QLEQLHQRWLRDGQAYSLILFDLDFFKQINDKFGHSAGDAVLVKTAQQIGKVTRAMDIFC 304 Query: 421 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-----KEIGFSSGIYAMKENDTLH 475 RLGG+EF ++L + ++A + +++++ L+ + I S GI DT Sbjct: 305 RLGGEEFLLVLPGTDGEVAEIIAQKLQQALRQSSLNWQGSLIPISASFGIVTTATGDTPD 364 Query: 476 DAYKASDERLYVNKQNKNSRS 496 +D+ +Y K+ R Sbjct: 365 SLLALADKAMYRAKETGRDRC 385 >UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7I354_THIIN Length = 752 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 10/182 (5%) Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 + + + +D +TG+ NR+ L++ + GS + +A+D+ Sbjct: 559 IFAFKDITEAKARESELRNLAYTDTLTGIPNRRYFLARAALELRRAQREGSPFVVLALDI 618 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 D+ KQIND GHQ GD I AQ Q +R D RLGGDEF I+L +T Q+A + Sbjct: 619 DRFKQINDRFGHQVGDAVIRCFAQTCMQQLRGPDLCGRLGGDEFAILLPQTTRQVAFDVA 678 Query: 444 ERIEKRLQHIA-------PQKEIGFSSGIYAMKENDTL---HDAYKASDERLYVNKQNKN 493 +R+ +Q + + S GI TL + +D+ LY KQ Sbjct: 679 QRLRLSIQEASCLPSSAPDGLTLTTSIGIAEFLPTSTLMDADELLDRADQALYRAKQAGR 738 Query: 494 SR 495 +R Sbjct: 739 NR 740 >UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA43_HYDS0 Length = 610 Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats. Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 2/175 (1%) Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 A+ + L + + +++I D +TG+YNR+ L +LE+ + + + I D Sbjct: 432 AVFTFVDITKEKELSELLLKQSIEDTLTGIYNRRYLKDKLERHVNLAKRYERPLSVIMFD 491 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K INDT GH GD + +++ + ++IR +D R GG+EF I+ ++T + A L Sbjct: 492 IDFFKHINDTFGHDVGDKVLIAISKVVSENIRNTDIFARYGGEEFIIVAPETTKEDAKIL 551 Query: 443 PERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 E++ ++++ + + S G+ ++++ DT K D LY K+ +R Sbjct: 552 AEKLRSLIRNLHFEEGINVTCSFGVVSLEKPDTKETLLKRVDNALYEAKRTGRNR 606 >UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJI0_9BACT Length = 750 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 8/190 (4%) Query: 314 KSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSG 373 K ++ + + R Y + I+D +TGL+N +L + + +SG Sbjct: 530 KELVVRVKALIAQKREFEAMLRAYHSARHRAITDGLTGLFNHAYFLEKLTREAELAGRSG 589 Query: 374 SSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD 433 + I +D+D+ K NDT GH+ G+ + LA+ +++ R+SD R GG+EF ++L + Sbjct: 590 RPLSVIMLDVDRFKHFNDTNGHETGNELLKDLARLMERCFRRSDLLARYGGEEFVVLLPN 649 Query: 434 STPQIAAQLPERIEKRLQHIAPQKE-------IGFSSGIYAMKENDT-LHDAYKASDERL 485 + AA L ER+ +R+ + S G+ AM + + + +D L Sbjct: 650 TPKSQAAVLAERLRRRVAEYPFVGRESQPGGCLTVSLGVAAMPTDTSDPKQLLELADRAL 709 Query: 486 YVNKQNKNSR 495 Y KQN +R Sbjct: 710 YRAKQNGRNR 719 >UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvestris BL2 RepID=B8EJQ5_METSB Length = 738 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 62/307 (20%), Positives = 121/307 (39%), Gaps = 24/307 (7%) Query: 213 QRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTH--DRPLLWRFLNVTLTDTDS 270 + ++ + P + G+++L L + DR + + T+ Sbjct: 414 NVLEADLRAFDQPYFFVDP-DGLIVLTNQPALLLRQLWPPSSDRKSIPARQSPTVNIAPP 472 Query: 271 GRDIIINQSEDNLFQ---YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILL 327 + I++ + NL +V + L+I + + ++ +L L+ L Sbjct: 473 SKREIVDATWINLGGERVFVRRRFANDSEWSLVLTIPMAELFANRVLGIVITLLATLMAL 532 Query: 328 -----------NMVRMHFRL-YQNVSR----ENISDAMTGLYNRKILTPELEQRLQKLVQ 371 + V+M RL Q ++R + +D +TGL+NR L + + + Sbjct: 533 IYLFGKERSVYDSVQMDKRLKLQELARSLEFQASTDPLTGLFNRMKFDQALAAEILRANR 592 Query: 372 SGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL 431 + + D+D K IND GHQ GD + L++ IR +D R GG+EF I++ Sbjct: 593 YNRPLSLVLFDIDHFKNINDLHGHQVGDNVLVQLSRIAAAHIRGTDVLARWGGEEFVILV 652 Query: 432 VDSTPQIAAQLPERIEKRLQHIAPQK--EIGFSSGIYAMKENDTLHDAYKASDERLYVNK 489 +S Q+A Q E + + +K + S G+ + D +D +Y K Sbjct: 653 PESNGQMAYQTAENLRNAIGQAVFEKAGAVTCSFGVAEYVDGDAAESLISRADAAMYRAK 712 Query: 490 QNKNSRS 496 +++ Sbjct: 713 IKGRNQA 719 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 6/164 (3%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + + +DA+TG+ NR+ L + + + + G+ + + +D+D K+IND GH Sbjct: 297 RKLEQLASTDALTGVANRRQLVERADMEVPRSERHGAPLSLLCLDLDHFKRINDDYGHLA 356 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI---- 453 GD + +A+AI+QS+R SD R+GG+EF ++L D+ A + ERI +L+ + Sbjct: 357 GDEVLKQVAEAIQQSLRPSDLLARVGGEEFHVLLPDTDLAGARDVAERIRVKLEGLDIPV 416 Query: 454 -APQKEIGFSSGIYAM-KENDTLHDAYKASDERLYVNKQNKNSR 495 + S G + + + +DERLY K +R Sbjct: 417 QGVVLHVTVSVGCAQLGPDGADMKSLTHTADERLYQAKALGRNR 460 >UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384142 Length = 445 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 6/179 (3%) Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 + L V RL + ++R D++TG+ NR+ + + ++ + + + +D Sbjct: 262 FVALKEDVTETKRLQEELTRLASQDSLTGIANRRHFLERAHTEIIRAGRAKTPLAVLMLD 321 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K+IND GH GD A+ LA + ++R++D RLGG+EF I+ A + Sbjct: 322 VDHFKKINDEYGHAAGDAALKALADTCRSTLRETDLFGRLGGEEFGILFPGDDLNAATEA 381 Query: 443 PERIEKRLQHIAPQKE-----IGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ER+ + I S G+ +++ + ++ A +D+ LYV KQ +R Sbjct: 382 AERLRLAIAATKITIGGATIAITASLGLSLLQDGEKSIDAALSRADQALYVAKQAGRNR 440 >UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPG9_DESMR Length = 368 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 7/173 (4%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 + L + + R SD +TGL NR+ + L + G+ + I +D+D K + Sbjct: 182 ISARKALEEELLRLAASDPLTGLANRRGFFEGAARMLGMARRCGTPLSMIMLDIDHFKAV 241 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 ND GH GD + +A +++S+R SD A R+GG+EF ++ + +L ER+ Sbjct: 242 NDAYGHDAGDAVLRAVAGRLRESLRVSDLAGRVGGEEFAVLCPGTDLAGGVELAERLRLA 301 Query: 450 LQHIAPQ-----KEIGFSSGIYAMKENDT--LHDAYKASDERLYVNKQNKNSR 495 L+ + ++ S G+ +++ +D LY K+ +R Sbjct: 302 LEDMVVTADCRAVKVTASFGVAQCRDDRDAAPSACLTRADRALYAAKRGGRNR 354 >UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ARY2_PELPD Length = 355 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 16/252 (6%) Query: 256 LLWRFLNVTLTDTDSGRD----IIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITS 311 LL R + D ++ + +I ++ +L G+ + F + Sbjct: 99 LLRRNEVYYVEDREASQIPEEHLIAHEQSRSLVAVPLVSQSSIHGMLCLDDVIPRTFDKN 158 Query: 312 SWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQ 371 +L A I + + H + + I+D++TGL NR+ L Q ++ + Sbjct: 159 RISQILVLASFAAISIENAKFH----EETHQLAINDSLTGLNNRRYFDKVLPQEYERAHR 214 Query: 372 SGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL 431 G + ID+D K NDT GH GD + + + +++++R D+A R GG+EF +IL Sbjct: 215 EGLPFSLMMIDVDNFKLFNDTHGHHLGDRILATIGRVLRKTLRSIDFAFRYGGEEFVVIL 274 Query: 432 VDSTPQIAAQLPERIEKRLQHIA-------PQKEIGFSSGIYAMKENDTLH-DAYKASDE 483 ++ + A ++ ERI +R+ + + + S GI + +D+ Sbjct: 275 PETDLESAHKVAERIRQRVMAESRKLLRNPQDRPVTVSVGISCYPRDAACSITLLAMADQ 334 Query: 484 RLYVNKQNKNSR 495 LY K+ +R Sbjct: 335 LLYQAKRTGRNR 346 >UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SM80_AERS4 Length = 432 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 7/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +L + RL + + +D +TG+ NR+ ++Q +Q+ + G ++ + +D+D Sbjct: 247 ILRDISERARLVEELKVAATTDPLTGIANRRRFDELVKQEVQRCQRFGHTMSLLLLDIDH 306 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQ+NDT GHQ+GD AI L + I + +R+ D R GG+EF I+L +++ +A ER Sbjct: 307 FKQVNDTHGHQQGDQAILSLVRRIAKQLREVDILGRWGGEEFIILLPETSLDLAWASAER 366 Query: 446 IEKRLQHIA------PQKEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNS 494 I + + + + S GI A + D + + + +D LY+ K+ + Sbjct: 367 IRLAIASESHPLGADIEIPLTVSIGISASQGPQDNVDNMVRRADTALYLAKKQGRN 422 >UniRef50_C5BK03 Ggdef domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BK03_TERTT Length = 580 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 5/167 (2%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 L + D++TGL NR+ + Q ++ + + D+D K+IND G Sbjct: 405 ELLEEERYRATHDSLTGLPNREAYNERVYQEYRRFTRYSRPLGIAVCDIDHFKKINDNFG 464 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 HQ GD + L+A+ I +RK D+ R GG+EF I+L +++ + + ++I + A Sbjct: 465 HQTGDRVLKLIARLISTRLRKVDFVARYGGEEFVILLPETSASQSRSVLDKIRAAVAKAA 524 Query: 455 PQ-----KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + +I S GI A + +DT+ A++ +D+ LY K + +R Sbjct: 525 FRFGDDPVKITLSFGISAFRSDDTIETAFQRADKALYQAKADGRNRC 571 >UniRef50_Q1D817 HAMP domain/GAF domain/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D817_MYXXD Length = 645 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 8/172 (4%) Query: 333 HFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDT 392 + RL+ + ++D +TG+ NR+ L +E L + + G+ + + +D+D K+IND Sbjct: 434 NARLHAETVKLTMTDPLTGVPNRRHLFQRMELELARSNRFGTPLALLMVDVDHFKRINDL 493 Query: 393 LGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH 452 GH+ GD + + ++ +RK D R GG+EF I+L + A ++ E++ + + Sbjct: 494 AGHRVGDETLRRVCDVLRLRVRKVDTLARYGGEEFVILLPQTNKAEAMEVAEKLRRAVAE 553 Query: 453 IA-------PQKEIGFSSGIYAMKENDTL-HDAYKASDERLYVNKQNKNSRS 496 P + S G + + + +D LY +K+ +R+ Sbjct: 554 SVELVQPGLPGNHVTVSIGASHFPSDASAQEELVDCADAALYFSKRTGRNRT 605 >UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7X2_9GAMM Length = 365 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 2/163 (1%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 R + + +D +T L NR+ L LEQ ++ + + I +D+D K +NDT G Sbjct: 196 RANEKLEYLASTDPLTELVNRRRLDEVLEQEFERTSRYQGELSLILLDIDHFKAVNDTRG 255 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--H 452 HQ GD I + KQ RKSD A R GG+EF I+ ++ A E++ ++ Sbjct: 256 HQVGDEVIAGVGNIAKQMSRKSDTAGRWGGEEFLIVAPQTSCDNAVAFAEKLRLSIENTE 315 Query: 453 IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + S G+ +++ +T+ K +DE LY K N +R Sbjct: 316 FSSGVRVSASFGVASLETGETIQLVLKRADEALYRAKHNGRNR 358 >UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=Deltaproteobacteria RepID=Q1NJD1_9DELT Length = 469 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 6/168 (3%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 + Q +I D +TGL+N++ L +++ + + + +D+D K NDT G Sbjct: 299 KSEQRYKELSIVDELTGLFNKRYFNKHLRLEVERARRYQHPLSLLIMDIDNFKHYNDTYG 358 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GD ++ L ++ S+R +D A R GG+EF +IL + + +L ER+ +R + Sbjct: 359 HPAGDRVLSALGGMLRDSMRLNDLACRFGGEEFVVILPMTDGETGLKLAERLRERFAALE 418 Query: 455 PQK------EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 Q S G+ ++ ++ +D+ LY K RS Sbjct: 419 FQPLEGVVIRKTMSVGVAQFEDEESPESLLARADKNLYAAKAAGRDRS 466 >UniRef50_Q3JE99 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Nitrosococcus oceani RepID=Q3JE99_NITOC Length = 661 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 6/164 (3%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + + ++D++TGL NR+ +EQ + ++ + + +D+D K++ND GH+ Sbjct: 467 RRLGQMAMTDSLTGLPNRRYAMERMEQAWAEYERNQTPFSCLVMDLDFFKRVNDQYGHEI 526 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH----- 452 GD + +A + S R SD RLGG+EF ++ + A Q+ ER+ + ++ Sbjct: 527 GDSVLLEIANVFRGSARSSDIICRLGGEEFLVVCPHTVATEAFQVAERLRRAVEEHSWTM 586 Query: 453 IAPQKEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 + + S G+ A E +D Y+ +D+ LY K+N +R Sbjct: 587 LDSTSVLSVSIGLAASSEGMQHWNDLYRLADQALYQAKRNGRNR 630 >UniRef50_Q2IF81 Response regulator receiver modulated diguanylate cyclase n=4 Tax=Anaeromyxobacter RepID=Q2IF81_ANADE Length = 351 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 62/286 (21%), Positives = 104/286 (36%), Gaps = 18/286 (6%) Query: 225 PVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLF 284 V + D + D LL L D I+ + ED Sbjct: 51 RVLEREEYDVRTAADGKDAIRKVRGEPPDLVLLDMIL--PDMDGLEVLRIVKARPEDQFI 108 Query: 285 QYVSY-VHDLPGGIRVSLSIDILYFITSSWKSV-LFWILTALILLNMVRMHFRLYQN-VS 341 + V L I F+ + + A++ + ++ R Q + Sbjct: 109 PVIILSVKSDLDSKVAGLRIGADDFLAKPFAEAEILARCAAMLRIKTLQDQLRETQRRLR 168 Query: 342 RENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLA 401 + ++D +TGL NR+ L++ ++ + V I ID+D K +ND GH GDL Sbjct: 169 EQTLTDDLTGLKNRRAFDERLQEEFRRAHRYSDPVSLIMIDLDHFKLVNDRYGHPFGDLV 228 Query: 402 ITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL----------- 450 + ++ ++ S R D R GG+EF +IL + A + ERI K L Sbjct: 229 LRGASEQLRASTRDPDICARYGGEEFAVILPKTHLSGALAVAERIWKELSARSYPVPAGS 288 Query: 451 QHIAPQKEIGFSSGIYAMKEND--TLHDAYKASDERLYVNKQNKNS 494 ++ S GI D + + +DE LY K+ + Sbjct: 289 AEPDTAIQVTASMGIAFYPSKDIGSPEALVRYADEALYQAKKAGRN 334 >UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-binding domain protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RTE2_9PROT Length = 483 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 91/215 (42%), Gaps = 12/215 (5%) Query: 293 LPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQ----------NVSR 342 + + + L + S S++ + + + M + RL Q + + Sbjct: 104 IRQCLWLKLPVLGADQELQSIASIIHEVTPSPEIPAMQQTLDRLRQANQELQQTVVELEQ 163 Query: 343 ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAI 402 +D +TG +NR+ + + + +L + + + +D+D K IND GH GD + Sbjct: 164 VAGTDKLTGAWNRRRIEECVRSEMDRLNRYDQPLSLLVVDIDHFKAINDQHGHGAGDQVL 223 Query: 403 TLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIG 460 + ++ +R +D R GG+EF ++ ++ AA L ER+ ++ ++ Sbjct: 224 QAVTALLQSRLRGTDALARWGGEEFVVVCPNTGRSTAALLAERLRGQIASADFPLIGQLT 283 Query: 461 FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S G DT + ++ +DE LY K ++ Sbjct: 284 VSIGAAECSPGDTWEEWFQRADEALYRAKTGGRNQ 318 >UniRef50_Q3SK04 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK04_THIDA Length = 393 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 11/226 (4%) Query: 275 IINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHF 334 II Q ++ L + Y L G V+L +D + + + F + L +V+ Sbjct: 163 IIRQHDEFLGMPIVY---LSGETNVALQVDAMRLGGDHFLTKPF---NPVFLNTIVKSKI 216 Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 Y+ + R D++TGL N L+ L + ++ + ID+D KQIND+ G Sbjct: 217 ERYRALRRSMYHDSLTGLLNHSSGKNTLDMVLSGIAHEEGTLSVVMIDIDHFKQINDSYG 276 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GD I L+ +KQ +RK D R GG+EF + L + A + ER+ + I Sbjct: 277 HPTGDQVIRSLSWLLKQRLRKHDILCRYGGEEFLVGLPHTDAGQALAILERVRQDFAQIR 336 Query: 455 P-----QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S+G+ + + KA+DE LY K +R Sbjct: 337 HPYRDTHFSASVSAGVASYPHQQSGDALIKAADEALYQAKHRGRNR 382 >UniRef50_Q2SAD1 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAD1_HAHCH Length = 553 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 128/334 (38%), Gaps = 30/334 (8%) Query: 167 FYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPV 226 P ++ S I + ++Y Q +Q M+ V Sbjct: 235 LQSPPDIS----QLLSKFDQCFISESDVPYRVLLIDDDSELAMYHAQLLEQAQMN--ARV 288 Query: 227 YVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQY 286 + VL++ + + Y L + + L + I Q Sbjct: 289 VSQPEDIPDVLMEFFPDVILMDLY------LPGYNGIELA-------VAIRQDATLYGVP 335 Query: 287 VSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENIS 346 + +V R L I + L + AL LL V R + + Sbjct: 336 IIFVSVEQDIAR------HLGAIRAGGDDFLIKPVPALFLLASVESRARRGRELRGMLSR 389 Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL N L Q+L + + GSS+ ++ +D+D K++ND GH GD + A Sbjct: 390 DGLTGLLNHISAEEYLSQQLSRARRMGSSLAYVMVDLDHFKRVNDQYGHLMGDRVLVNFA 449 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE-----IGF 461 + ++ +R+SD R GG+EF +IL D+T + A + E + I E + F Sbjct: 450 RYLQGRLRRSDVIGRYGGEEFVVILPDTTKEHARFVIESMRMSFATINHNTEEDPLQVTF 509 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S+GI A + D + KA+D+ LY KQ ++ Sbjct: 510 SAGIAAFPDIDDMTMLSKAADDALYDAKQQGRNK 543 >UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID=Q98G89_RHILO Length = 426 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 7/165 (4%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + +++I D TGLYNR+ L + L+++ +SG + I +D+D KQ NDT GH+ Sbjct: 240 ETLRQQSIRDPNTGLYNRRYLEETSSRELRRMERSGQPLAMIMLDVDHFKQFNDTFGHEA 299 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK 457 GDL + +A + R+SD R GG+EF +++ ++ AA+ E + K ++ + Sbjct: 300 GDLVLKQVAATLLDHARESDVVSRYGGEEFALMMPGTSLADAAERAEALRKAIKQLHLTH 359 Query: 458 ------EIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNSR 495 I S G+ A E + + A+D LY K + R Sbjct: 360 RGRTLGTITASFGVSAFPELGASWVEIVNAADRSLYQAKADGRDR 404 >UniRef50_A8F6M9 Diguanylate cyclase n=1 Tax=Thermotoga lettingae TMO RepID=A8F6M9_THELT Length = 170 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 48/162 (29%), Positives = 89/162 (54%), Gaps = 2/162 (1%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 + + + R +I+D + GL+NR + E+ + + I ID+D K++NDT GH Sbjct: 4 INEELERISITDKLNGLFNRYKMDEEMRKAFYLWKRYQRPFSLIMIDIDWFKKVNDTYGH 63 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--I 453 Q GD + L +K+S+R SD R GG+EF ++ ++ + A L E+I +++ Sbjct: 64 QIGDKVLQELGALLKKSLRASDIVSRWGGEEFLVLSLEIDEKGAITLAEKIRSEIENYSF 123 Query: 454 APQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 A +I S G+ + K ++T+ + + DE++Y+ KQ+ +R Sbjct: 124 AENIKITVSIGVCSAKNHETIDELLVSVDEKMYIAKQSGRNR 165 >UniRef50_A1WXD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXD1_HALHL Length = 324 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 2/168 (1%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 V L Q + R+ D +TG YNR+ + L Q ++ ++ + + ID D K I Sbjct: 148 VTDRVALEQELERQAQQDGLTGTYNRRKMDNLLHQERERAIRYRQQLTAMLIDADGFKAI 207 Query: 390 NDTLGHQEGDLAITLLAQ-AIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 ND GH+ GD + L + +R D+ R GGDEF +IL +++ + A + ERI Sbjct: 208 NDNYGHEAGDELLHDLVHCCFRPCLRTIDHLGRWGGDEFLVILPETSEEAAYHVAERIRD 267 Query: 449 RLQHIAPQKE-IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +++ + P I S GI A + ++ D +++D LY K+ +R Sbjct: 268 QVETLQPGPGAITVSIGISAYQPEESPRDWLRSADFALYEAKRGGRNR 315 >UniRef50_Q21HV6 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q21HV6_SACD2 Length = 301 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 7/182 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 +AL L+ R + + + R D +TG+ NR+ E L K ++ G + + + Sbjct: 117 SALRLIQAKRDLEKANKELERLATRDPLTGINNRRSFFKLAEAELTKTIRHGRDIALLML 176 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D D K INDT GH GD A+ + + + + R+SD RLGG+EF I D+ + A Sbjct: 177 DADHFKMINDTYGHAAGDEALLTITEICQNACRESDILARLGGEEFAICCPDTNLEGAYA 236 Query: 442 LPERIEKR-----LQHIAPQKEIGFSSGIYAM--KENDTLHDAYKASDERLYVNKQNKNS 494 + ERI ++ ++H + I S GI ++ ++ + + +D LY K+ + Sbjct: 237 VAERIRQQCENTVIEHNSASFGITLSIGITTFVPSQDKSITEMLQRADNLLYQAKEMGRN 296 Query: 495 RS 496 RS Sbjct: 297 RS 298 >UniRef50_Q0G1R3 Periplasmic sensor diguanylate cyclase (GGDEF) n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G1R3_9RHIZ Length = 442 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 4/200 (2%) Query: 299 VSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKIL 358 + +D + + + F IL L V + + RE +D++TGL NR+ Sbjct: 166 FAPGVDPMRTLVPHVAANWFGILLLGHFLTGVGRRRHATRILQREAFTDSLTGLPNRRAF 225 Query: 359 TPELEQRLQKLVQSGS---SVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK 415 +E+ L L + G V + ID+D KQ+ND GH GD + ++ I++ +R+ Sbjct: 226 DQSVER-LSDLRERGEVPGPVALLLIDIDHFKQVNDQWGHFFGDKVLRSVSTTIRRQVRR 284 Query: 416 SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLH 475 D R GG+E +IL + A + ERI +++ + +I S G+ ++ + Sbjct: 285 GDILARYGGEEIAVILPSTQHSDACSVAERIRMAVENGEFRVKITASVGVAIDEDINAFC 344 Query: 476 DAYKASDERLYVNKQNKNSR 495 D ++A+D LY K+N +R Sbjct: 345 DLFQAADRALYRAKKNGRNR 364 >UniRef50_B1Y766 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y766_LEPCP Length = 381 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 9/213 (4%) Query: 292 DLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRL---YQNVSRENISDA 348 +P ++ ++ + + K + + + + H RL V + D Sbjct: 160 TIPADTAAQQALSGMFLLWTLVKGASINLAGMALRMELNDSHERLAAALLRVEQLAERDE 219 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TGL NR+ + L + ++ ++G S +D+D K+IND GH GD + +AQ Sbjct: 220 LTGLPNRRRMQAALAEERERCSRNGVSFSVAMLDIDHFKRINDLYGHPMGDAVLRSVAQL 279 Query: 409 IKQSIRKSDYAIRLGGDEFCIILVDST-PQIAAQLPERIEKRLQ-----HIAPQKEIGFS 462 ++ ++RK D R+GG+EF +IL + + A + ER+ ++ ++ S Sbjct: 280 MRTALRKPDLVGRVGGEEFLMILPGAARLEEAKHVVERVRAAIEGNDWSATRADLQVTAS 339 Query: 463 SGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 G+ + +++ + +D LY+ KQ ++ Sbjct: 340 IGVAVGEPGESVESLFDRADRGLYLAKQGGRNQ 372 >UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGM9_9PROT Length = 334 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 66/271 (24%), Positives = 136/271 (50%), Gaps = 3/271 (1%) Query: 228 VAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYV 287 GQ +V+ DI+ ++ I T + + + + S +++IN + + +++ Sbjct: 61 DNGQYYDLVISDIDMPHMNGIEMTRAISEINKEQAILIISAFSNSEMLINLIDIGINKFI 120 Query: 288 SY-VHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENIS 346 D + +S ++ + + +++ L+ + L ++ ++ I+ Sbjct: 121 QKPTKDHEFFLVLSKMLNDISIEKENIENIKNIKLSNIKLEEKIQQELSKNIELNALAIT 180 Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGLYNR L L+ + K+V+ + + I ID+D+ K INDT GHQ GD + + Sbjct: 181 DKLTGLYNRVKLDKVLDLEINKMVKLQAEISIIFIDIDRFKPINDTYGHQIGDKVLQSFS 240 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSG 464 Q +K +IRK+D R GG+EF II ++ + + L E + K +++ + + KE+ S G Sbjct: 241 QVLKNNIRKTDIVGRWGGEEFLIICHEANIEGSLHLAENLRKIIENTSFEYIKELTASFG 300 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + ++ D++ + +D+ LY K N ++ Sbjct: 301 VASFEDGDSIDSLVERADKALYKAKHNGRNK 331 >UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VVS2_9CYAN Length = 314 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 92/176 (52%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 L +V+ H +L + + I+D +TGL+NR+ Q + + + + ID+D Sbjct: 135 LNRLVKEHEKLANLLRKLAITDPLTGLWNRRHFLTVAYQEFNRASRYKRFMSILMIDIDH 194 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQIND GH GD + +A++I S+R++DY R GG+EF +L ++ A ++ ER Sbjct: 195 FKQINDEYGHTMGDEVLKGVAKSIVGSLREADYCGRFGGEEFVTLLPETDSSGAVRVAER 254 Query: 446 IEKRLQHIA-----PQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + KR++ I Q ++ + G+ + + +D + + +++ LY K +R Sbjct: 255 LRKRMEQITIGIGDKQVQMTVTVGVASYQLDDANIEVIIQRANKALYHAKSQGYNR 310 >UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW5_9GAMM Length = 274 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 5/179 (2%) Query: 322 TALILLNMVRMHFRLYQ---NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 TA+ + ++ ++ L + + R+ D +TG+ NR L + L + + G+ Sbjct: 85 TAVDITDLKQVELELQRANAELKRQAYYDRLTGVANRHYFETLLNRELARADRYGAPFAL 144 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 + D+D K++NDT GH GD+ + + + I + +R +D R GG+EF ++L + Sbjct: 145 VMFDLDHFKRVNDTFGHAAGDVVLQEVTRVIAERLRDADVLGRWGGEEFMVLLPGTQEAD 204 Query: 439 AAQLPERIEKRLQ--HIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 AA++ E + R++ + S G+ A + + DE LY K +R Sbjct: 205 AARVAETMRARVEGHDFPEAGRVTISLGVAAFCAGEPRTGLLRRVDEALYRAKGEGRNR 263 >UniRef50_Q21VE2 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21VE2_RHOFD Length = 398 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 6/167 (3%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 RL + + I D +TGLYNR+ L+ L + + + ++ SS+ F+ D+D K +ND+ G Sbjct: 221 RLQVELHEQAIHDPLTGLYNRRYLSDALAREIIQAKRANSSLTFVMADIDHFKFVNDSYG 280 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR----- 449 H GD + +A +K+ R SD A R GG+EF ++ ++ ++A + E I++ Sbjct: 281 HLAGDEVLVQVASLLKKHARGSDIACRYGGEEFLLVFPGTSLELAHKRAEEIQQNCAALS 340 Query: 450 LQHIAPQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 +QH + S G+ A ++ +D+ LY +K N ++ Sbjct: 341 IQHEGKNIAVMLSFGVAAYPDHGQQWEQIIVKADKALYQSKCNGRNQ 387 >UniRef50_Q7MFB4 GGDEF family protein n=2 Tax=Vibrio vulnificus RepID=Q7MFB4_VIBVY Length = 387 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 104/214 (48%), Gaps = 9/214 (4%) Query: 291 HDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMV-----RMHFRLYQNVSRENI 345 L +S I+ F+ +S L ++ +++L + ++ RL N+ + ++ Sbjct: 167 WMLFRTYVTHMSSQIVDFMFASSIHQLSFLALIMLILTLGFTFPWMINARLITNIYQTSL 226 Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 D +T +YNR+ + + + L + + G+ + I +D+D K+IND GHQ GD ++ + Sbjct: 227 RDTLTNIYNRRAMEEMIPRELSRASRLGAELSIIILDLDHFKRINDQYGHQVGDQTLSGI 286 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEI----GF 461 Q + +RK D + R+GG+EF ++L D+ + A + E++ +++ + Sbjct: 287 GQLLTSQLRKQDISFRIGGEEFLVVLPDTPIESAVLVAEKLRQKIAETRFAPKQRETWTA 346 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S G+ + D K +D LY+ K +R Sbjct: 347 SFGVAQLITGDDWDALMKRADAALYLAKHKGRNR 380 >UniRef50_Q7WZ31 MmoQ n=1 Tax=Methylococcus capsulatus RepID=Q7WZ31_METCA Length = 634 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 5/162 (3%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + +D +TGL NR+ LE+ + + + +D+D K IND+LGH Sbjct: 466 RRLELMAHTDQLTGLPNRRYAMDRLEREWAQARTFDRPLSIMMLDLDWFKSINDSLGHDA 525 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP-- 455 GD A+ A+ +++++R SD R+GG+EF II+ D+ A Q ER+ ++ P Sbjct: 526 GDQALVHAARVMRETVRTSDVVCRMGGEEFLIIIPDTAGPAAIQTAERVRSAVEQQQPAK 585 Query: 456 ---QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 + + S G+ +L D +D LY KQN + Sbjct: 586 LKLSRPLTASIGVADSTSAPSLKDLLLKADNALYQVKQNGRN 627 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 85/162 (52%), Gaps = 2/162 (1%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 + + + ++ +DA+TG++NR L +++ + ++ I D+D KQ+ND+ GH Sbjct: 264 INELLEKQASTDALTGIFNRMKFNQTLTSEIKRAKRYRVALSLILFDIDHFKQVNDSYGH 323 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP 455 GD + LA+ + ++R+ D R GG+EF I +++ + A +L E++ ++++ Sbjct: 324 LSGDTVLKHLARLVASNLREIDIFARWGGEEFVIQAPETSLESAIKLAEKLRSKIENYVF 383 Query: 456 --QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 K+I S G+ + +D +DE LY K+ ++ Sbjct: 384 PAPKKITVSFGVATFRSSDNDITLVNRADEALYRAKEGGRNQ 425 >UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TWE2_ACIAC Length = 377 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 6/204 (2%) Query: 298 RVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKI 357 ++L++ + F +S++ + + L L + + + D +TGLYNR+ Sbjct: 166 ILALTLFLTVFAHTSYRRAMEQQKSNDRLREQFEEIRALQDQLQEQAVRDPLTGLYNRRH 225 Query: 358 LTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSD 417 L L + + G + + ID+D K+INDT GH GD + LAQ +++ +R D Sbjct: 226 LDATLASEIARCGAQGLPLSLMMIDIDHFKRINDTHGHAAGDAMLQALAQLLQRHVRVRD 285 Query: 418 YAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ-----HIAPQKEIGFSSGIYAMKEND 472 A RLGG+EF ++L ++ +A + E + + + H S G+ A ++ Sbjct: 286 LACRLGGEEFVLLLPETPLAVARERAEALREAFEALQVRHDPEVLSATLSCGVAAFPQHA 345 Query: 473 TLHDAYKA-SDERLYVNKQNKNSR 495 A A +DE LY K +R Sbjct: 346 RQPLALTASADEALYAAKMQGRNR 369 >UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N773_9GAMM Length = 462 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 94/207 (45%), Gaps = 6/207 (2%) Query: 296 GIRVSLSIDILYF---ITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGL 352 + ++D+ + + V + L++ R R+ + + + + D +TG+ Sbjct: 253 SLSFHQNVDLTWLWRMLIVIAVVVALFFYRYLLVNQHNRELQRVNKKLEQLSQRDHLTGI 312 Query: 353 YNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQS 412 +NR L +Q L + + + +D+D KQIND+ GH GD I +A +++ Sbjct: 313 HNRYYLDQAFQQELTRYKRYQHGFTIVMLDIDLFKQINDSYGHVVGDDVIKQIAMLLREH 372 Query: 413 IRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP---QKEIGFSSGIYAMK 469 +R D R GG+EF I+ +++ A L E + + ++ + ++ S G+ + Sbjct: 373 VRDQDVVARWGGEEFLILNPETSLDGARTLAEHLRRLIRRTPFTVDKIDVTVSFGVTDYR 432 Query: 470 ENDTLHDAYKASDERLYVNKQNKNSRS 496 + + + +D LY KQ+ ++ Sbjct: 433 AGEDIETMIQRADSALYQAKQSGRDKT 459 >UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEH9_DESAH Length = 341 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 2/172 (1%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 ++ R + + + + I D +TGL+NR+ L L + L + + G+S I +D+D Sbjct: 160 VMERTRELEKKNRELEQIAIIDQLTGLFNRRKLDEMLSRELIRSRRYGNSFGLIMVDIDF 219 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K +NDT GHQ GD + A +KQ +R+ D R GG+EF II ++ L E+ Sbjct: 220 FKTVNDTHGHQIGDQVLQRFADQLKQGVREVDVLGRWGGEEFLIICPETIKDYLILLAEK 279 Query: 446 IEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + +Q IA E S G+ ++ D L D+ LY+ K+ +R Sbjct: 280 LRIAVQSIAVPGVGEKTASFGVTVYEKGDNLDTLVDKVDKALYLAKEKGRNR 331 >UniRef50_Q0VQ38 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VQ38_ALCBS Length = 364 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 4/169 (2%) Query: 331 RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIN 390 R + +S + D +TGLYNR+ LE+ + + + + + ID+D KQ+N Sbjct: 191 RRLHEAHNRLSAIAVRDDLTGLYNRRHFLERLEEEMSRANRENNPLHLAIIDLDHFKQVN 250 Query: 391 DTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 DT GH GD + AQ +RKSD R GG+EF ++ ++ Q ER+ R Sbjct: 251 DTYGHHAGDDVLHRFAQLAAMGLRKSDLLARYGGEEFVVLFPHTSTQACQAAMERLRNRF 310 Query: 451 --QHIAPQKEI--GFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 QH + ++ FS+G+ + ++ + K +D LY K +R Sbjct: 311 AQQHYSFSGDLRSKFSAGLTPYQPGESAEEFIKRADRALYQAKDLGRNR 359 >UniRef50_B3E241 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E241_GEOLS Length = 557 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 75/270 (27%), Positives = 125/270 (46%), Gaps = 15/270 (5%) Query: 233 KGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHD 292 G +L D I+ PL ++ T +GR + QS+ ++ VS+V Sbjct: 279 DGQILTDKGLFTFSTIY-----PLQTGQVSSTGNTAATGRSMTQVQSDTYYWKMVSFVS- 332 Query: 293 LPGGIRVSL-SIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTG 351 P +R L + + SS VL L + LN ++ V DA+TG Sbjct: 333 -PEIVRTKLYGFRKILLLISSVLIVLLAFLARQVALNALQRE-ETAALVHAMAFRDALTG 390 Query: 352 LYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQ 411 L NR++L L Q + ++ V + +D+D K +NDTLGH+ GD + ++ +++ Sbjct: 391 LPNRRLLEDRLNQSIASADRNAGKVAVLFLDLDHFKAVNDTLGHEVGDQLLKQVSGRLQE 450 Query: 412 SIRKSDYAIRLGGDEFCIILVDSTPQI-----AAQLPERIEKRLQHIAPQKEIGFSSGIY 466 ++RKSD RLGGDEF ++L++ T A ++ + I + Q ++G S GI Sbjct: 451 AVRKSDTVARLGGDEFILLLLNITSHQDVDSVADKVIQAISRPFSIAGQQAQVGTSIGIA 510 Query: 467 AMKENDT-LHDAYKASDERLYVNKQNKNSR 495 E+ T +D+ LY KQ+ +R Sbjct: 511 LYPEDCTDPESLVAFADKALYKAKQSGRNR 540 >UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087A8_SHEFN Length = 321 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 3/178 (1%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 ++ + + + + L + R +D +TGL+NR+ T E + + + Sbjct: 139 LIGLIGISTDITAAYHLRSKLERLANTDPLTGLFNRRSFTSFCEHEFFRATRYFQPFSLM 198 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 ID+D K++NDT GH GD I +A + +R++D R+GG+EF I+L D+ A Sbjct: 199 IIDIDLFKKVNDTYGHLVGDEVIKRVANICNEHVREADVLARIGGEEFAILLPDTDIDSA 258 Query: 440 AQLPERIEKRLQHIAPQK--EIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNS 494 L ER+ + Q QK I S G+ ++ D + +K +D+ LY +K + Sbjct: 259 YVLAERLREAQQQYEEQKTPSITISIGVATLRSQDKAFLEIFKRADKALYSSKNVGRN 316 >UniRef50_Q2SP63 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q2SP63_HAHCH Length = 584 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 5/178 (2%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 LT ++LL++ + R+ +DA+TGL+NR+ + + QS + + Sbjct: 384 LTEMVLLSLALSS--RVNELQRKTYTDALTGLFNRRHFDDKFATEFHRAQQSKQPLTLLV 441 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 ID+D KQ NDT GH GD A+ +A+ + + +RK + R GG+EF +IL ++ A Sbjct: 442 IDIDCFKQFNDTYGHNVGDHALKEVARILAKGVRKPNCPCRYGGEEFAVILPNTDHDAAM 501 Query: 441 QLPERIEKRLQHIAPQK-EIGFSSGIYAMKEN--DTLHDAYKASDERLYVNKQNKNSR 495 L R+ +++ ++ S G+ +M + D + ++ +D LY KQ +R Sbjct: 502 SLANRLRVKVEEETESGYKLSISVGVASMAHDEFDCPNKLFERADYALYTAKQQGRNR 559 >UniRef50_B4WZN3 GGDEF domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZN3_9GAMM Length = 395 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 9/199 (4%) Query: 306 LYFITSSWKSVLFWILTALILLNMVRMHFRLYQ-NVSRENISDAMTGLYNRKILTPELEQ 364 Y+I S+ + ++ L L++++ + + V + D +TGL NR+ L + Sbjct: 183 YYWIASTVAFSVPFVAGVLTLVSLLLRRWVYREAQVRAMAVQDPLTGLSNRRALFDQFAH 242 Query: 365 RLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGG 424 + + ++G ++ +D+D KQIND GH GD + +A +++ +R++D R+GG Sbjct: 243 EMARARRTGEALSVCVMDLDHFKQINDRHGHAAGDTVLVRVANLLRECLRETDRIGRIGG 302 Query: 425 DEFCIILVDSTPQIAAQLPERIEKRL------QHIAPQKEIGFSSGIYAMKEND--TLHD 476 +EF ++L D+ + A ++ ER L + + S G+ + T Sbjct: 303 EEFVLVLPDTGHEGAEKVIERCRAALVGTPVMLDVGEPLTVSASFGVVTALAGEQATESQ 362 Query: 477 AYKASDERLYVNKQNKNSR 495 +D+ LY+ K+ +R Sbjct: 363 LVSRADDALYLAKKRGRNR 381 >UniRef50_A0LD73 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD73_MAGSM Length = 513 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 6/189 (3%) Query: 313 WKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQS 372 + ++ ++ L + V RL + + + D +TGL NR+ L + + Sbjct: 301 FPYIIPFLQVFLRESSSVIESKRLMEKLRESALKDPLTGLNNRRFLEEYERTIVASSQRK 360 Query: 373 GSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILV 432 + + +D+D K +NDT GHQ GD + LA + Q R SD +R GG+EF ++L Sbjct: 361 EMFLSVLMMDLDHFKMVNDTHGHQVGDAVLKSLAGVLMQQTRASDLVVRYGGEEFMVVLQ 420 Query: 433 DSTPQIAAQLPERIEKRLQHIAPQ-----KEIGFSSGIYAMKENDT-LHDAYKASDERLY 486 + P + Q+ E+I + ++ + + S G+ + T D + +D LY Sbjct: 421 NERPHMGNQIAEKIRETVERLKINVPGGCLQKTISIGVAEFPTDGTDFDDVVEKADMALY 480 Query: 487 VNKQNKNSR 495 K+ +R Sbjct: 481 RAKEQGRNR 489 >UniRef50_C5S9J2 Diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9J2_CHRVI Length = 498 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 4/192 (2%) Query: 307 YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL 366 + + SS I + LI L + + + + +D +TGLYNR+ L L + Sbjct: 283 WALVSSTPMNFSGIPSRLIGLADISELKAIQDELRAASFTDPLTGLYNRRYLYQRLAHEI 342 Query: 367 QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE 426 + + I D+D K+INDT GH GD + ++ +K IR+ D A R GG+E Sbjct: 343 DLANRYKHPLAVILFDLDLFKRINDTFGHGVGDDVLVCVSGTLKSCIREVDVAGRHGGEE 402 Query: 427 FCIILVDSTPQIAAQLPERIEKRLQHIAPQKE---IGFSSGIYAMKENDTLHDAYKASDE 483 F +IL + A ++ ERI + I+ E S G+ ++L +D Sbjct: 403 FLVILPHADLTEATEVAERIRASVAQISWSVEGLAATISGGVAQ-HCGESLDAFLDVADR 461 Query: 484 RLYVNKQNKNSR 495 RLY+ K + +R Sbjct: 462 RLYMAKDSGRNR 473 >UniRef50_B0TAR1 Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TAR1_HELMI Length = 999 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 7/183 (3%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 + + L L + RL + R ++ D +TGL+NR+ L LE L + ++ I Sbjct: 809 VRSLLALAAPTISNMRLIDHNRRLSLIDPLTGLHNRRYLEQTLENLLVRSRETERPFCLI 868 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 D+D+ K NDT GH GD A+ ++A ++ +R+ D A+R GG+E +IL+ + ++A Sbjct: 869 MADIDQFKGFNDTFGHDAGDKALRMVAANVRNCLREEDIAVRFGGEEITVILMGVSKELA 928 Query: 440 AQLPERIEKRLQHIAPQKE------IGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNK 492 + +RI KR++ + I S G+ A E+ TL + +D LY K+ Sbjct: 929 VTIADRIRKRIEQTPIEIGDGQLQYITLSMGVSAFPEDGKTLEKLIQRADLALYEAKRLG 988 Query: 493 NSR 495 +R Sbjct: 989 KNR 991 >UniRef50_B3PG18 GGDEF domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PG18_CELJU Length = 512 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 5/163 (3%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 + + + DA+T L NR+ +Q+ + G + ID+D K+IND GHQ Sbjct: 345 LEQQRFKALHDALTELPNREAYNERARAEVQRWERYGRPLAIAIIDIDHFKKINDNYGHQ 404 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 GD I ++ ++I + +R+ D+ R GG+EF ++ +++ A + E+I + A Sbjct: 405 AGDRVIKVIGRSIAKRLREVDFFCRYGGEEFVALMPETSGDNALIVLEKIRDAIARAAFN 464 Query: 457 -----KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 +I S+G+ K DTL A++ +D+ LY K N + Sbjct: 465 YKEQPLQITISAGLTEFKPGDTLDSAFERADQALYAAKSNGRN 507 >UniRef50_A9FTU9 Putative membrane protein (GAF and GGDEF domain) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FTU9_SORC5 Length = 859 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 14/217 (6%) Query: 290 VHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAM 349 VHD P G V S F T S +S L + + + + + R+ + + D + Sbjct: 498 VHDRPLGTLVLGSRRRAAF-TDSVRSTLEVLAS---HMAVSLSNARMVRRLEELATMDGL 553 Query: 350 TGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAI 409 TGL N++ + +Q++ + + + D+D K++NDT GH GD+ I L + Sbjct: 554 TGLLNKRAMLEVADQKITAARRFSRRLSVLVTDIDHFKKVNDTYGHDVGDVIIKGLGDVL 613 Query: 410 KQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL---------QHIAPQKEIG 460 +++ R +D R GG+EF +I ++ + A L ER+ + L Q ++ Sbjct: 614 RRAKRTTDAVARFGGEEFVVICEETDARGAMLLAERVREELGRTTFHAAGSSGPVQCQVT 673 Query: 461 FSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNSRS 496 S GI E T + +KA+DE LYV+K++ +RS Sbjct: 674 CSIGIATYPEAGSTWEELFKAADESLYVSKRSGRNRS 710 >UniRef50_A1W3W7 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID=A1W3W7_ACISJ Length = 388 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 106/220 (48%), Gaps = 23/220 (10%) Query: 299 VSLSIDILYFITS------SWKSVLFWILTALILLNMVRMHFRLYQNVSRENI------- 345 V++ + ++ TS ++ +++ +L +++N+ R + RE + Sbjct: 145 VAVVVSPRFYATSFDTMDGAYAAMILIVLGGCMVVNLRVQQMRQRLDRQREALAEALAEN 204 Query: 346 -----SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDL 400 D +TGLYNR+ + ++ ++ + +++F ID+D K++ND GH GD Sbjct: 205 RALAMRDELTGLYNRRAMVELIQLECRRRRRGQGTLLFAMIDVDHFKRVNDHHGHAMGDH 264 Query: 401 AITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI-----AP 455 + + A A++ ++R++D R GGDEF ++L D P+ A L ER + + + P Sbjct: 265 VLRVFADALRANVRETDVLARWGGDEFLLLLSDIEPRSAQTLLERTREAIAALPVPNAPP 324 Query: 456 QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S+G+ + + + + +D+ LY K +R Sbjct: 325 DLRLSMSAGLALHMPHSSPQETLERADQALYAAKDQGRNR 364 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 145/361 (40%), Gaps = 35/361 (9%) Query: 154 FHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIY--- 210 Y+LD + + +P + W F S + ++++ + +Y Sbjct: 122 LRYHLDHKNSAFFIGKP-QLSKVHNQRWFFGFSKAERDQYGRLKRILVAIIDIDHLYGRY 180 Query: 211 QDQRTKQNVM--------SLLTPVYVAGQLKGIVL---LDINKNNLRNIFYTHDRPLLWR 259 ++ ++++ ++ T + Q+ G + N ++ + P+ Sbjct: 181 RELDLPEDMIITISSEDGTIYTRIPGHEQVVGQNFPGGTKLLCNLKKSKIFHGASPINGE 240 Query: 260 FLNVTLTDTDSGRDIIINQ-SEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLF 318 L +L I +EDN F L GG + + ++LF Sbjct: 241 RLFASLERVGDTSMIAAVSINEDNFFADWRRHSLLMGGFGLVVG------------AILF 288 Query: 319 WILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 + +++ + + FR+ Q + ++ +D +TG+ NR+ + +++ ++G+ + Sbjct: 289 TL--SILTVRSQQEQFRIQQQLQQQATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSV 346 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 + +D+D K++NDT GH GD + +AQ + R+SD R GG+EF I+L + Sbjct: 347 VMMDIDHFKKVNDTYGHHVGDQVLMEVAQTCRSHCRESDLVSRFGGEEFLILLPSTNLNG 406 Query: 439 AAQLPERIEKRLQHIAP-----QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKN 493 A E+I + ++ ++ + S G+ + + +D LY K + Sbjct: 407 AQTHAEKIRQAIEDLSFPTAEGNVSVTASFGVSQWQGETKIDRVVSRADAALYQAKHDGR 466 Query: 494 S 494 + Sbjct: 467 N 467 >UniRef50_B2V8X7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V8X7_SULSY Length = 675 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 53/176 (30%), Positives = 95/176 (53%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + + V + RL + +I D +TGLYNR+ + + ++K ++G + + ID+D Sbjct: 496 IFSPVLSNLRLIEINKELSIRDPLTGLYNRRFALEFMNKEIEKSKRNGKPLSIVMIDLDD 555 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K+IND GH GD + + + +K+ +RKSD + R GG+EF +IL +++ + ER Sbjct: 556 FKKINDIHGHSAGDNILKIFSDVLKKELRKSDISCRWGGEEFLLILPETSKDKTLDVIER 615 Query: 446 IEKRLQH-----IAPQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 I Q ++ + + S GI + E+ D + + K +D+RLYV K+ +R Sbjct: 616 IRMTFQLNTMGIVSSRPYLTASMGIASYPEDSDNIDEIIKIADDRLYVAKREGKNR 671 >UniRef50_Q1NX84 GGDEF:GAF n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NX84_9DELT Length = 488 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L +L++ V RE + D +TGLYNR+ L + L K ++ V + +D+D Sbjct: 180 LAAALERAQLFERVRREAMHDELTGLYNRRYLQDSGRRELHKAERARQPVALLLLDLDHF 239 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K++ND GH GD + LA ++ ++R+SD R GG+EF ++L D+ A QL +++ Sbjct: 240 KEVNDYWGHLRGDRVLRELAGLLRCNLRQSDVPARYGGEEFVVLLPDTASGEAGQLADKL 299 Query: 447 EKRLQHIAPQKE------IGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNSR 495 + ++ +E + + G+ A + + L + +D RLY K ++ Sbjct: 300 RRLVEEQLVLEEGEERRLVTATIGVAAYPADGNNLEELLAVADRRLYAGKTAGRNQ 355 >UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD98_LEGLO Length = 721 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 92/185 (49%), Gaps = 7/185 (3%) Query: 318 FWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVM 377 I L + + RL +N+ +++ D +TGLYNR+ L L +++ + ++ S + Sbjct: 510 LLITAFSELTALAFANVRLRENLRYQSMRDPLTGLYNRRYLEDFLLKQIHQSERTKSPIS 569 Query: 378 FIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQ 437 + +D+D K+INDT GH GD+A+ L + +++ IR D A R GG+EF + ++ + Sbjct: 570 LLMLDLDHFKKINDTYGHDAGDVALKELGKILQEDIRVGDIAARYGGEEFIVAFYNTDEK 629 Query: 438 IAAQLPERIEKRLQHI------APQKEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQ 490 E I + + + P I S G+ + ++ +++D+ LY K Sbjct: 630 TIKTRAESIREAVSRLQVKYGAQPVGPITVSIGVAVYPTDGRNTNELIESADKALYFAKT 689 Query: 491 NKNSR 495 N +R Sbjct: 690 NGKNR 694 >UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica RepID=A9L0C9_SHEB9 Length = 466 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 10/213 (4%) Query: 292 DLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHF---RLYQNVSRENISDA 348 D+ + + ++ SV +L +L + R++ R +++ ++++ D Sbjct: 234 DVTLTLFAGARFSLGWYAARISSSVSSMVLLCALLWEVNRLYVATQRANESLYQQSVKDT 293 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TGL+NR+ L +L + + + + +D+D K ND GH GD + +A+ Sbjct: 294 LTGLFNRRYLESQLAIHIDHAKRHKEPLCLLVLDVDHFKAFNDQHGHLAGDDCLVTVAKQ 353 Query: 409 IKQSI-RKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE-----KRLQHIAPQKEIGFS 462 ++QS+ R +D+ R GG+EF ++L + + Q+ ER+ +++++ + S Sbjct: 354 LEQSLYRPADFIARYGGEEFIVVLPHTDAKDGMQIAERLRLNVSAEKIEYQGQLLSVTIS 413 Query: 463 SGIYAM-KENDTLHDAYKASDERLYVNKQNKNS 494 G + +T A+D LY K + Sbjct: 414 IGCAVLRHSEETAQSLLIAADSALYQAKAAGRN 446 >UniRef50_A5IF46 Sensor histidine kinase n=5 Tax=Bacteria RepID=A5IF46_LEGPC Length = 565 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 9/190 (4%) Query: 314 KSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSG 373 + +L ++ I L + + L + + +++ D ++GLYNR+ L L++ L + + Sbjct: 372 QEILASMMAEQIALGI--SNIMLRETLRNQSLRDVLSGLYNRRYLNEVLDRELNRCARKS 429 Query: 374 SSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD 433 S+ + +D+D KQ ND GH+ GD+ I A ++Q RK D A R GG+EF +I+ + Sbjct: 430 LSLAVLMLDIDHFKQFNDKFGHEAGDMVIQAFANVLRQVTRKEDIACRYGGEEFILIIPE 489 Query: 434 STPQIAAQLPERIEKRLQHIAPQ------KEIGFSSGIYAMKENDT-LHDAYKASDERLY 486 + A Q + I + I + +I S G+ + + D A+D LY Sbjct: 490 IDLEAALQRAQSIHDAVSRIHLRYGGNALTQITISIGLTMYPAHGNDMQDLITAADNALY 549 Query: 487 VNKQNKNSRS 496 K + +++ Sbjct: 550 EAKNSGRNKT 559 >UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WV4_DESDG Length = 398 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 24/191 (12%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 V H R+ + +S +D +TGL NR+ ++++ SG + + +D+D K++ Sbjct: 191 VTAHRRMLEELSHMARTDPLTGLNNRRFFMEAARAEVERMQSSGRPLSLLMLDIDHFKRV 250 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 NDT GH GD+ + L+ + +++R D RLGG+EF ++L ++ A + E + + Sbjct: 251 NDTWGHDAGDMVLKQLSCCLAETMRGQDVCARLGGEEFAVLLPETGHAEACRAAETLRQA 310 Query: 450 LQHIAP---QKEIGFSSGIYAMKE---------------------NDTLHDAYKASDERL 485 + +A + S G+ + + K +D L Sbjct: 311 VAGMAFAGHGFSVTSSLGLTTLDSAGHAVSGQRPVPGGVAVSACCGQVVEILLKRADIAL 370 Query: 486 YVNKQNKNSRS 496 Y K+N +R+ Sbjct: 371 YAAKKNGRNRT 381 >UniRef50_C1D6K0 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6K0_LARHH Length = 585 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 2/160 (1%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + + + +D +TGL NR L E+ +++ + I +D+D K +ND GHQ Sbjct: 422 RELEKLSSTDRLTGLANRLRLDEEVARQISLAQRHAQEFSLILLDLDHFKLVNDQHGHQV 481 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIAP 455 GD + +A ++Q++R SD A R GG+EF I+L ++ + A ++ +++ + + + Sbjct: 482 GDRVLIEIAALLRQTLRNSDTAGRWGGEEFLIVLPQTSVESARKVADKLRRTIAGHNFGS 541 Query: 456 QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S GI DT + D +Y +K++ +R Sbjct: 542 VGPQTASFGIAVWHTGDTAKTLFVRVDHAMYQSKRDGRNR 581 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 99/219 (45%), Gaps = 9/219 (4%) Query: 286 YVSYVHDLPGGIRVSLSIDI------LYFITSSWKSVLFWILTALI-LLNMVRMHFRLYQ 338 ++ + G I V +I + ++ S +++ T ++ + V ++ + Sbjct: 856 FLQFNKKRQGEIIVVPNIPVKRKNGSIFLADISSAAIILDGRTIMVGFFHDVTERKKVEE 915 Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 + +D++TG+ NR+ + L L++ + G+ + + D+D K++ND GH G Sbjct: 916 EIKLLATTDSLTGIANRRAFSTHLASELERSNRYGTPLSLVMFDIDYFKKVNDNFGHDAG 975 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-- 456 D + L++ +K++IR D R GG+EF +++ +S A E++ + + Sbjct: 976 DDVLQALSELVKRNIRAVDIVARWGGEEFMLLMPESDISAATAAIEKLRREISDFPFGQV 1035 Query: 457 KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S GI N+ K D+ LY K+ +R Sbjct: 1036 GSLTVSFGITVFVLNEDSKVFLKRVDDALYQAKEKGRNR 1074 >UniRef50_A1VD04 Diguanylate cyclase n=3 Tax=Desulfovibrio vulgaris RepID=A1VD04_DESVV Length = 331 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 8/174 (4%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 +R R + ++R+ +D +TGL NR+ T LE L++ + + + +D+D K + Sbjct: 122 LREWQRTIEEMARQRDTDPLTGLPNRRAFTRHLEAELERTRRGRGDLSLVILDIDHFKSV 181 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 ND GH GD + LA ++ S+R D A R+GG+EF I+L ++ A L ERI +R Sbjct: 182 NDNYGHPCGDEVLLRLASQLQTSVRLYDLAARIGGEEFAIVLPGASALKAQALCERILQR 241 Query: 450 LQHIA------PQKEIGFSSGIYAMKENDTLHD--AYKASDERLYVNKQNKNSR 495 P + FS GI T +D+ LY KQ +R Sbjct: 242 FASTGMDCPGVPPFHVTFSGGIATCTTGVTCPASLLVDRADKALYEAKQAGRNR 295 >UniRef50_C0QDC5 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDC5_DESAH Length = 305 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 6/213 (2%) Query: 289 YVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDA 348 Y + V+ F ++ + I L + + R H ++ + I+D Sbjct: 82 YSANYSYEEAVNAGASDFIFKPFRFEELDLRIKRVLREVRLKREHAKMVDKLEELAITDG 141 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TGLYN + +L+ +++ + + + +D+D K NDT GH EGD + + + Sbjct: 142 LTGLYNSRHFFCQLKAEIERYTRYHHPLSVLLLDIDLFKNYNDTWGHLEGDKVLMTMGEI 201 Query: 409 IKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE------IGFS 462 I +R +D A R GG+EF ++L ++ + A + ERI L E + S Sbjct: 202 ITSCLRSNDTAYRYGGEEFTVVLPETRVEEACLVGERIRGILSQRVFTPEKEKTAKVTIS 261 Query: 463 SGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 G +DTL K +D+ +Y +K+ + Sbjct: 262 IGATQFSTSDTLESFIKRADKAMYDSKKAGRDQ 294 >UniRef50_Q21F47 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21F47_SACD2 Length = 368 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 4/206 (1%) Query: 293 LPGGIRVSLSIDILYFITSSWK--SVLFWILTALILLNMVRMHFRLYQNVSRENISDAMT 350 L G + Y + W S F L AL+L + F Q + ++D +T Sbjct: 157 LAGSAFYFIEQQSSYVMHVFWLACSFSFGFLGALMLDRSRKQFFVSQQELQHLAVTDPLT 216 Query: 351 GLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIK 410 GLYNR L L + + + + S + ID+D K IND+ GH+ GD + ++Q + Sbjct: 217 GLYNRNQLNIVLNKEMAREQRYNRSFGLLVIDVDFFKSINDSFGHEAGDNVLKQISQDLL 276 Query: 411 QSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIAPQKEIGFSSGIYAM 468 QS+RK D IR GG+EF ++ + Q L E + K+++ + S G Sbjct: 277 QSVRKIDTVIRWGGEEFIVVASEVDKQSIVALSENLCKKIEGSEFNGVGRVTVSIGATLY 336 Query: 469 KENDTLHDAYKASDERLYVNKQNKNS 494 K +DT D +D+ LY K+ + Sbjct: 337 KLDDTPSDLLSRADKALYKAKETGRN 362 >UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ09_DESAC Length = 521 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 11/190 (5%) Query: 315 SVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGS 374 + +LT + ++ +++ Q + R + D +TGLYNR+ E+ + +S + Sbjct: 328 MAIIVLLTCYLFVSRRKLYL-AQQKLMRISERDPLTGLYNRRKFMNYYEKEWKAAQRSKT 386 Query: 375 SVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSI-RKSDYAIRLGGDEFCIILVD 433 + + ID+D K ND GH GD+A+T +A AI+ I R D R GG+EF +L + Sbjct: 387 PLAVLMIDIDHFKDYNDHYGHLAGDVALTAVAGAIETRITRPRDCTARYGGEEFIGLLPE 446 Query: 434 STPQIAAQLPERIEKRLQHIAPQK-------EIGFSSGIYAMKENDTLH--DAYKASDER 484 + AAQ+ E+I +++ + Q I S GI +++E D ++ + +D+ Sbjct: 447 TDDLAAAQVAEKIRIQVEKLQVQHAYSATADHITVSIGITSLQEGDKINRMELINLADKA 506 Query: 485 LYVNKQNKNS 494 LY K+ + Sbjct: 507 LYEAKEAGRN 516 >UniRef50_A4X2X1 Diguanylate cyclase n=5 Tax=Actinomycetales RepID=A4X2X1_SALTO Length = 753 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 10/188 (5%) Query: 317 LFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 L + T + + R+++ R +++D +TGL+N + L L + +++ + G + Sbjct: 493 LVTLRTFAGHAAVAVDNVRVHEETQRLSLTDPLTGLWNYRYLRQSLRREVERATRFGRML 552 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 +A+D+D+ K +NDT GH GD + A+ I+ IR+ D A RLGG+EF ++L ++ Sbjct: 553 SVLALDLDRFKHVNDTHGHAAGDRVLVEFARRIRGEIREVDLAFRLGGEEFVVLLPETDV 612 Query: 437 QIAAQLPERIEKRLQH---------IAPQKEIGFSSGIYAMKE-NDTLHDAYKASDERLY 486 AA + ER+ ++ + + S G+ + T + A+DE LY Sbjct: 613 VGAAIVAERLGAAVRDTPIAVDGLGVPVLVPVTVSIGVAVHPDHGGTGQEVLNAADEALY 672 Query: 487 VNKQNKNS 494 V K + Sbjct: 673 VAKASGRD 680 >UniRef50_Q88L38 Sensory box protein n=12 Tax=Pseudomonas RepID=Q88L38_PSEPK Length = 800 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 2/161 (1%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 + + +++D++TG++NR+ L+ L++ + G + I +D+D K+IND GH Sbjct: 634 EEELRALSVTDSLTGIHNRRYFQERLKIELERAQRDGLPLAVIMLDIDHFKRINDRFGHA 693 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 GD + L Q I Q +R++D RLGG+EF ++ S A L + + ++++ + Sbjct: 694 VGDRVLRSLCQRIAQRLRRTDVFCRLGGEEFMVLCPGSDANQARLLALELWQGVRNVPVE 753 Query: 457 --KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ++ S G+ + + +D +Y KQ R Sbjct: 754 GVGQVTASFGVAGWRSGEGADALLLRADAGVYAAKQAGRDR 794 >UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAX1_PSEFS Length = 388 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 17/212 (8%) Query: 294 PGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRE-------NIS 346 P ++V ++I +L F T F + L + + FRL + + R + Sbjct: 179 PSSMQVGVAIAVLVFST-------FVVSATRKLSDALEKAFRLTRQMERAHTISTRAAQT 231 Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL NR+ + ++ + + + +DMD KQINDT GHQ GD + + Sbjct: 232 DELTGLMNRRAFFEHAQVLYEQCRHNRQPLCALMMDMDHFKQINDTYGHQAGDQVLRQIG 291 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA--PQKEIGFSSG 464 I S R++D RLGG+EF ++L +++ A + E++ K + +A P + S G Sbjct: 292 GVISASFRQADVYGRLGGEEFAVLLPNTSLDTARTIAEQLVKAISGLASEPVHGLSASLG 351 Query: 465 IYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + + D LH +D+ LY K ++ Sbjct: 352 VASTHTQDQDLHGLMNTADKALYRAKAQGRNQ 383 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 6/178 (3%) Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 + ++N + + +++ R + +D +TGL+NR+ + + + ++ + +D+ Sbjct: 358 MAMVNDITHQQQYQEHLKRLSRTDELTGLFNRRHFITLMHKEFSRARRTHERLTLAMLDI 417 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 D K +ND GH GD + L + +++ +R D A R GG+EF I D+ A + Sbjct: 418 DHFKDVNDKYGHDVGDHVLQHLGRILREDVRPYDIAARYGGEEFAICFPDTDLSQADHIC 477 Query: 444 ERIE-----KRLQHIAPQKEIGFSSGIYAM-KENDTLHDAYKASDERLYVNKQNKNSR 495 ER+ + S G+ + E++ L K++D LY K N +R Sbjct: 478 ERLRTLCAASEVSRNGGTIGFTVSFGLSELRPEHEDLDGLLKSADNALYAAKANGRNR 535 >UniRef50_Q47C21 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C21_DECAR Length = 410 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 81/162 (50%), Gaps = 5/162 (3%) Query: 340 VSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGD 399 + R + D +TG +NR++ +++ L + ++ ++ I D+D K+INDT GH GD Sbjct: 245 IHRLSTIDPLTGCFNRRLFNERIQEELDRAIRYQRALAVIFCDIDHFKRINDTCGHLLGD 304 Query: 400 LAITLLAQAIKQSIRKS-DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH----IA 454 + A+ ++ +R D+ R GG+EF I+L +++ A ER+ L + Sbjct: 305 QVLQEAAECFRRELRGHIDWVARYGGEEFVIVLPETSLPAAIATAERLRLALTESMVALL 364 Query: 455 PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 P + S G+ +T+ + + +D +LY K +++ Sbjct: 365 PGLTVTASFGVTQHVPGETVQELLQRADNQLYAAKAAGRNQT 406 >UniRef50_Q7NQQ0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQQ0_CHRVO Length = 249 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 2/183 (1%) Query: 315 SVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGS 374 S + + +R +L + + R+ D +TGL NR+ L++ ++ +SG Sbjct: 57 SFTMALSMTWFAVRRLREARQLLKALRRQAERDDITGLANRRRANQALQRETERSYRSGR 116 Query: 375 SVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDS 434 + +D+D K IND+ GH GD+ + QA++Q R+ D R GG+EF II ++ Sbjct: 117 PYSVLLLDLDHFKHINDSHGHLAGDMVLQRFGQALRQRARQLDTVARWGGEEFIIICPET 176 Query: 435 TPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNK 492 A L E I + L+ + S G+ + ++DT +D LY KQ Sbjct: 177 EQAGALTLAENIGQLLRETDFGAVARVTASIGVATLSDDDTPDSLVHRADMHLYAAKQAG 236 Query: 493 NSR 495 R Sbjct: 237 RDR 239 >UniRef50_B9ZLB8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLB8_9GAMM Length = 332 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 6/178 (3%) Query: 323 ALILLNMVRMHFRLYQNVSR----ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 A +L MVR + +NV R +D +TGL+NR LE L++ + S + Sbjct: 150 AQVLERMVRDRTQDLENVQRHLEHLATTDPLTGLHNRMKGNHALEDELERARRQSSPLAT 209 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 I +D+D K IND GH +GD + + Q + + +R++D A R GG+EF I+ +T Sbjct: 210 IMVDLDHFKAINDHQGHAQGDHVLRAVGQLLHERLRETDTAARWGGEEFLILCPHTTAGQ 269 Query: 439 AAQLPERIEKRLQH--IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 A+ L E + + ++ + S G+ A++ DT +D LY K+ + Sbjct: 270 ASSLAETLRQSIEQHDFGTDPPLTASFGVAALEPGDTAEGLIARADRALYAAKRASRN 327 >UniRef50_Q02P32 Putative two-component response regulator n=6 Tax=Pseudomonas aeruginosa RepID=Q02P32_PSEAB Length = 525 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 7/182 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 LI + + Q + +D +TGL+NR + E L+ + + + + Sbjct: 339 ATLIWCYDISRRKAMEQELRLLASTDTLTGLHNRHSFLHQAELMLKAAERFRHPCVALML 398 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K IND+ GH GD A+ +A+ ++Q +R+ D RLGG+EF +L + + A Sbjct: 399 DIDHFKNINDSHGHLTGDRALQRVAETLRQGLREVDLLGRLGGEEFAALLPEVSLDQALD 458 Query: 442 LPERIEKRLQHI------APQKEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNS 494 + ER+ ++ + + S G+ ++ D L +D LY K + Sbjct: 459 VAERLRAGVEALRVSNPDGEPLRMTVSIGVALRRDAGDDLESLLVRADSALYQAKSGGRN 518 Query: 495 RS 496 R+ Sbjct: 519 RT 520 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 9/167 (5%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 + E+++D +T + NR+ L L + + + G + I ID+D K+INDT GH Sbjct: 281 LKKAKEESLTDPLTQVANRRALFQSLTRETARTRRYGEPLSLIIIDLDHFKKINDTYGHP 340 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI--- 453 GD + +A + +R SD R GG+EF +L ++T A + E+I + + Sbjct: 341 VGDRVLKEVAGHARALLRDSDTLARYGGEEFVALLPETTLPQAMEKAEQIRLSVAAMRFK 400 Query: 454 --APQKEIGFSSGIYAMKENDTL----HDAYKASDERLYVNKQNKNS 494 I S G+ + + + +D+ LY K + Sbjct: 401 LKGESLSISASLGVAQLDDGASQDANNEAFVHRADQALYRAKSGGRN 447 >UniRef50_B1A0P6 Diguanylate cyclase response regulator n=1 Tax=Candidatus Pelagibacter ubique RepID=B1A0P6_PELUB Length = 455 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 9/215 (4%) Query: 290 VHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAM 349 + + L D + F T S + I T L+ + + Q + ++D + Sbjct: 232 IETATTLAALDLGADDVLFPTFSGSEIAHRIATQLVHKRVNDHLRAMVQEGFKAAVTDPL 291 Query: 350 TGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAI 409 TGLYNR+ L + Q+ Q + + +D+D K++NDT GH EGD + +A+ + Sbjct: 292 TGLYNRRYAMTHLCHQFQRATQGQTDLALFVLDLDFFKRVNDTYGHAEGDQVLRRVAKLL 351 Query: 410 KQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK---EIGFSSGI- 465 + R SD R G +EF ++L D++ +IA + ER+ ++ + EI S G+ Sbjct: 352 QHVTRASDMVARFGREEFLVVLPDASAEIAGNIAERVCTMIRRLKIGPNLIEITASIGVS 411 Query: 466 -----YAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + T + K +D LY K R Sbjct: 412 LRYNAAQIHVHLTAQELMKQADRALYRAKAMGRDR 446 >UniRef50_B9QXS2 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXS2_9RHOB Length = 543 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 15/211 (7%) Query: 300 SLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRL--------YQNVSRENISDAMTG 351 L +LY I S SV +L + ++ +L + + DA+TG Sbjct: 313 GLKDPLLYLIPISLTSVFALVLVFMFFEERSKVRLKLAHGKLEQANRQLDALARQDALTG 372 Query: 352 LYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQ 411 L NR+ L+Q L +L + F+ +D+DK K INDT GH GD + A ++ Sbjct: 373 LANRRAFFDRLDQLLNELDRHPHPASFLMLDLDKFKIINDTRGHAAGDEVLKAFASLCQE 432 Query: 412 SIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK-------EIGFSSG 464 ++RK D R+GG+EF I+L ++ + A ER+ + I + S G Sbjct: 433 TVRKVDVVGRIGGEEFAILLPHTSAEDATVFAERLRTAVAAIRFSETGPLSGLTFTVSIG 492 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + A+ E +D+ LY +K + +R Sbjct: 493 LSAISERIDARTWLSQADKALYQSKASGRNR 523 >UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U463_9DELT Length = 974 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 14/265 (5%) Query: 237 LLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGG 296 ++D N + Y D L + ++ + S Y + H L G Sbjct: 714 IVDANPAAVHFYGYPAD-TLRSMPFSDINAQDETAIFKEMVDSRREKRSYFIHRHRLADG 772 Query: 297 IRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRK 356 DI S ++ +++ + RL + + R +D++TG NR Sbjct: 773 -------DIRDVEVYSGPIMVQGNQLLYSVIHDITERVRLEREMKRLATTDSLTGAANRH 825 Query: 357 ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS 416 E L++ ++ G S+ + +D+D K INDT GHQ GD + L+ ++ ++R + Sbjct: 826 EFFRLAELELRRAMRYGHSLAVLMLDIDYFKSINDTHGHQTGDAVLKALSALVRTTLRDT 885 Query: 417 DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE-----IGFSSGIYAMKEN 471 D RLGG+EF +L ++ + +R+ + L + + S G+ +++ Sbjct: 886 DIFGRLGGEEFAAVLPETDLAGGVLVADRLRRELGALKVRLRDIEVMFTVSIGLTETRKS 945 Query: 472 DTL-HDAYKASDERLYVNKQNKNSR 495 + L DA +DE +Y K+ +R Sbjct: 946 ERLIDDAINRADEAMYKAKRMGRNR 970 >UniRef50_A9BVC7 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID=A9BVC7_DELAS Length = 583 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 3/159 (1%) Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 + + SD +TGL NR+ +L+ + +SG + + ID+D K+IND GH G Sbjct: 419 ELEHQARSDPLTGLLNRRGFDFQLDFAMALARRSGRPLSVLVIDVDHFKRINDQHGHDMG 478 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIAPQ 456 D + LA+A + +R+SD R+GG+EF +L D+T A + E++ + L +A Sbjct: 479 DAVLRTLARAFRMRLRESDVLARMGGEEFLALLPDTTADAAVVIAEQLRELLATTPMAHG 538 Query: 457 KEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNS 494 + + S G+ ++ DT + DE LY K + Sbjct: 539 EPVTASVGVATLRGTTDTATAMLRRGDEALYEAKGAGRN 577 >UniRef50_A4BB60 Putative sensor protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BB60_9GAMM Length = 411 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 5/163 (3%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + ++ + + D++TG+ NR+ LT L++ +Q+ + + + +D+D KQ+ND GH Sbjct: 243 EELNHQAMHDSLTGVLNRRALTTRLDEEVQRSRRHNHPLTLLFLDLDHFKQVNDHYGHAV 302 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL-----QH 452 GD + QA+ + IR+SD R GG+EF IIL D+T + +L ER+++ +H Sbjct: 303 GDQILQETCQALTECIRESDVLARYGGEEFAIILTDTTLEAGHELAERLQECFSTRFSRH 362 Query: 453 IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +K + S G+ ++ DTL + +D LY K + +R Sbjct: 363 AILEKPLTMSVGLTSLFPTDTLTQLFTRADTALYDAKNSGRNR 405 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 13/184 (7%) Query: 325 ILLNMVRMHFRLYQ---NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 +L + +++ +L Q ++R D +T + NR+ +E ++ +S S+ I + Sbjct: 314 VLQSRIQILMQLKQSQDQLARSARVDGLTQVNNRREFERNIEMEWRRAQRSKRSLALIML 373 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSI-RKSDYAIRLGGDEFCIILVDSTPQIAA 440 D+D K ND GH GD + +AQ IK SI R D R GG+EF +IL ++ A Sbjct: 374 DIDHFKPFNDGYGHLAGDGCLRTVAQTIKHSIQRAQDMVCRYGGEEFVVILPETDLDGAQ 433 Query: 441 QLPERIEKRLQHIAPQKE-------IGFSSGIYAMKE--NDTLHDAYKASDERLYVNKQN 491 + ERI K + + E I S+G+ + + H+ +D+ LY K Sbjct: 434 MIAERIRKAIAKLKINHEFSSTDNTITISAGVACLSPSQEGSPHELILLADQGLYQAKAQ 493 Query: 492 KNSR 495 ++ Sbjct: 494 GRNQ 497 >UniRef50_Q30XX0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XX0_DESDG Length = 252 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 9/196 (4%) Query: 309 ITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQK 368 + W + T L+ + + R + + + D +T L+N++ L Q + + Sbjct: 45 LYERWLFAYMLVGTVLVFMLFGLIIGRHERRFAGLCLIDPLTSLFNKRHFDLRLGQEVAR 104 Query: 369 LVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFC 428 + S + I +D+D K++NDTLGHQ GD+ + +A ++ +R D R+GG+EF Sbjct: 105 HQREDSPMCVIMLDLDHFKKVNDTLGHQAGDVVLMAVASTLRGCVRTEDVLARVGGEEFA 164 Query: 429 IILVDSTPQIAAQLPERIEKRLQHI------APQKEIGFSSGIYAMKENDT---LHDAYK 479 +++ + A L ERI ++ + I S G+ M+ HD + Sbjct: 165 VVVPRTDMHGGAALAERIRAAVEEQIIPVGGGRETTIRVSLGVACMEAGSVPVLPHDLME 224 Query: 480 ASDERLYVNKQNKNSR 495 +DE LY K N +R Sbjct: 225 QADEALYRAKANGRNR 240 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 7/195 (3%) Query: 308 FITSSWKSVLFWILTALILLNMVRMH--FRLYQNVSRENISDAMTGLYNRKILTPELEQR 365 F+ + +++ ++ L V+ H + +S +D +TGL R+ L +L Sbjct: 166 FMVMAQMALIGGFISKLRASLRVKNHQLNEALEKISVMASTDELTGLCTRRELMKQLSNE 225 Query: 366 LQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGD 425 + +S ++ +D+D K+IND+ GHQ GD + +AQ ++ +R D R GG+ Sbjct: 226 FSRCRRSSGALSLCLLDIDHFKRINDSYGHQAGDAVLKKVAQTMQSLVRSIDCLGRYGGE 285 Query: 426 EFCIILVDSTPQIAAQLPERIEKRLQ-----HIAPQKEIGFSSGIYAMKENDTLHDAYKA 480 EF +IL + A ER+ + + +AP+ + S G ++E + + Sbjct: 286 EFLLILPQTPLDGAFITAERLRRAVMDIPFPEVAPEFRVTISLGAAELEEGEAMETLISR 345 Query: 481 SDERLYVNKQNKNSR 495 D+ LY K +R Sbjct: 346 VDKALYAAKGAGRNR 360 >UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPE0_9GAMM Length = 424 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 2/174 (1%) Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 + L V R+ + R +D +TG+ NR L LE +++ + G + I D+ Sbjct: 247 VALGKDVTDRLRMEDEIRRVAHTDWLTGVANRLSLGNTLEAEIERSQRYGRPLSLIMFDL 306 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 D K +ND GH+ GD + LAQ + +R +D R GG+EF I++ ++ A L Sbjct: 307 DHFKAVNDQYGHEAGDEVLKALAQTVSAELRDADTLGRWGGEEFIIVVPETRLVGATALA 366 Query: 444 ERIEKRLQ--HIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 E++ + + + + S G+ + D+ + +DE +Y KQ R Sbjct: 367 EKLRQAVSTMSVPGVPGVTASFGVAELASGDSAKLLARRADEAMYQAKQAGRDR 420 >UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8W1_MAGSM Length = 564 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 3/178 (1%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 + + L+ V RL Q + + +D +T L NR+ + L++ L++ V+ G ++ + Sbjct: 375 IGSAALILDVTDEKRLEQQLRELSTTDGLTKLINRRRMDELLDEELKRAVRYGLNLSILL 434 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 +D+D K+ NDT GH++GD + LA +K R DY R GG+EF +IL ++ A Sbjct: 435 LDVDHFKKFNDTYGHEQGDHVLIALAAEMKSYFRNIDYPCRYGGEEFFVILPNTDADGAI 494 Query: 441 QLPERIEKRL-QHIAPQKEIGFSSGIYAMKE--NDTLHDAYKASDERLYVNKQNKNSR 495 ++ +R+ +R+ + + S G+ + + +A+D LYV K+ ++ Sbjct: 495 KVADRLRERVAEKEVDGLRVTISIGVASYPDLSITRPDAMVRAADSALYVAKEQGRNK 552 >UniRef50_Q2L341 Putative signaling protein n=3 Tax=Bordetella RepID=Q2L341_BORA1 Length = 521 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 7/162 (4%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 + + +++++DA+TGL NR+ L L+ + G ++ +A+D+D K IND LGH Sbjct: 355 FNQLRQDSLTDALTGLLNRRGLDEILQSE----PRYGRAMSVLAVDIDHFKAINDELGHA 410 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIA 454 GD I +A ++ R SD RLGG+EF ++L ++ A Q ERI ++ Sbjct: 411 AGDAVIRGIAALLRSRARASDILGRLGGEEFVVLLPNTDRAQALQAAERIRAAVETFQAV 470 Query: 455 PQKEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNSR 495 P S G+ E +L + +DE LY K+ +R Sbjct: 471 PGGACTVSIGVAVYPHEGASLTAVLERADEALYEAKRGGRNR 512 >UniRef50_Q1J085 Diguanylate cyclase n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J085_DEIGD Length = 385 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 3/158 (1%) Query: 340 VSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGD 399 + R+ +D +TGL NR++L E+EQ L L + GS I +D+D K INDT GH GD Sbjct: 211 LERQARTDPLTGLPNRRVLYQEIEQLLLDLGR-GSPGGVILLDLDHFKAINDTHGHPTGD 269 Query: 400 LAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE- 458 + Q ++ +R D R GG+EF ++L + + + ER+ RLQ+ Sbjct: 270 DVLVQTGQLLRLDLRSEDILGRWGGEEFMVVLPATPAEGIGLVAERLRARLQNTPHPVAG 329 Query: 459 -IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S G+ A + DT + +D LY KQ +R Sbjct: 330 IVTASFGVAAARPGDTFGELTTRADGALYRAKQGGRNR 367 >UniRef50_A5F641 GGDEF family protein n=40 Tax=Gammaproteobacteria RepID=A5F641_VIBC3 Length = 512 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 8/229 (3%) Query: 268 TDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILL 327 G+ + +N + FQ+ V + DI + ++ ++ AL +L Sbjct: 287 YADGQKVYLNSRWVDEFQWYIIVEQKDE-----FNHDIWF--KATLGNLAISAFVALGVL 339 Query: 328 NMVRMHFRLYQN-VSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 + +M FR YQ + + D +TG YNR++ ++ + + + ID+D Sbjct: 340 GLAQMSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVIDLDHF 399 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 KQ+ND GH GDL + + ++ I + R GG+EF ++L T Q A Q E I Sbjct: 400 KQVNDNYGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESI 459 Query: 447 EKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + A Q ++ S G+ ++N++L + +D+ +Y K ++ Sbjct: 460 RAEIAMHASQPQVTVSIGVVQYQQNESLLHLFNRADQAMYTAKSEGRNK 508 >UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5G2_ACIC5 Length = 369 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 5/173 (2%) Query: 328 NMVRMHFRLYQN---VSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMD 384 + RL + + +DA+TG+ NR+ L+Q + ++ S + + +D+D Sbjct: 179 RLRESQTRLKEANACLQEMVTTDALTGVKNRRAFDEGLQQAWKMSARTKSPLSLLMVDVD 238 Query: 385 KLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPE 444 K++NDTLGH+ GD + L+AQ ++ R +D R GG+EF ++L + + A E Sbjct: 239 HFKRVNDTLGHEAGDDVLRLVAQTLQFMTRSTDMVARYGGEEFVVVLPGTEAEPAVAFAE 298 Query: 445 RIEKRLQHIA-PQKEIGFSSGI-YAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ++ + +++ + S G+ T + +D LY K + +R Sbjct: 299 QLRLNIANLSWRGHPLTVSIGVDSGSGSGKTECELVAHADAALYRAKNSGRNR 351 >UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID=A1WD95_ACISJ Length = 382 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 12/206 (5%) Query: 302 SIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQ------NVSRENISDAMTGLYNR 355 ++ Y + + LT + R+ + + + + D +TGL NR Sbjct: 172 ALSAAYLVMIAVVLASSTFLTTRVHSARARLRSQQRELAAAVEQIRELAVRDELTGLPNR 231 Query: 356 KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK 415 + + + + +S ++ +D+D K +NDT GH GD+A+ AQ + +R Sbjct: 232 RYMLEMMRLEHARAQRSRQPLLLAQLDLDHFKAVNDTHGHAAGDVALQSFAQTVHGCVRA 291 Query: 416 SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP------QKEIGFSSGIYAMK 469 SD R GG+EF +++ ++ P +L ER+ + Q + S G+ + Sbjct: 292 SDLLARWGGEEFLLLMANTHPADGTRLLERVRATVAATPVALPGGTQLSLTVSVGLAELA 351 Query: 470 ENDTLHDAYKASDERLYVNKQNKNSR 495 ++ + +D LY K+ +R Sbjct: 352 HGESTAALLQRADAALYGAKRLGRNR 377 >UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TNG7_RICCO Length = 204 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 10/187 (5%) Query: 318 FWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVM 377 F ++ +L + M++ R + + ++D +T ++NR+ + E+ L +SG + Sbjct: 3 FALMGSLGFVLMIKE--RSDREIRTLAMTDPLTKIFNRRAFMIQAEKELAAAERSGLPLA 60 Query: 378 FIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQ 437 F+ +D+D KQIND GH GD + + + + +RK D R GG+EFC +L + Q Sbjct: 61 FLMLDIDHFKQINDKYGHAAGDEVLVRIVEVLSSHLRKQDTLGRYGGEEFCALLPGTDAQ 120 Query: 438 IAAQLPERIEKRLQHIAPQKE-----IGFSSGIYAMK---ENDTLHDAYKASDERLYVNK 489 A L E++ + + E + S G + + + +D LY K Sbjct: 121 GAMALAEKLRLEVAMTRIEVEENSLGLTLSIGGSTWEHLGPTKDYRELMEEADRALYQAK 180 Query: 490 QNKNSRS 496 +RS Sbjct: 181 TGGRNRS 187 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76237 Uncharacterized protein yeaJ n=99 Tax=Enterobact... 469 e-130 UniRef50_UPI0001A43649 putative diguanylate cyclase n=1 Tax=Pect... 357 4e-97 UniRef50_D0YXF8 Putative two-component response regulator and GG... 356 1e-96 UniRef50_Q6LT28 Putative uncharacterized protein n=1 Tax=Photoba... 354 5e-96 UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b Re... 352 1e-95 UniRef50_Q04NQ1 GGDEF family protein n=7 Tax=Leptospira RepID=Q0... 351 4e-95 UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID... 318 4e-85 UniRef50_A4SKF7 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 306 2e-81 UniRef50_B5YAI6 Ggdef domain n=2 Tax=Dictyoglomus RepID=B5YAI6_D... 306 2e-81 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 297 8e-79 UniRef50_B8KV43 Sensory box histidine kinase n=1 Tax=gamma prote... 289 1e-76 UniRef50_B6BJE3 GGDEF domain protein n=1 Tax=Campylobacterales b... 287 9e-76 UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteri... 283 9e-75 UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 283 1e-74 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 282 2e-74 UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC... 279 2e-73 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 276 1e-72 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 276 1e-72 UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=... 274 4e-72 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 274 8e-72 UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio... 272 3e-71 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 270 9e-71 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 267 5e-70 UniRef50_Q31E96 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 267 8e-70 UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvest... 267 9e-70 UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain prote... 267 9e-70 UniRef50_Q1K453 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 266 1e-69 UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 266 1e-69 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 266 2e-69 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 266 2e-69 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 266 2e-69 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 266 2e-69 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 265 2e-69 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 265 3e-69 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 265 3e-69 UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanoph... 265 3e-69 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 265 3e-69 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 264 5e-69 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 264 5e-69 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 264 6e-69 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 264 7e-69 UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=... 264 8e-69 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 263 8e-69 UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thioox... 263 1e-68 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 263 1e-68 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 262 2e-68 UniRef50_B9L5Q2 Diguanylate cyclase n=2 Tax=Nautilia profundicol... 261 3e-68 UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 261 4e-68 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 261 5e-68 UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfo... 261 5e-68 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 261 5e-68 UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acid... 261 5e-68 UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepI... 261 5e-68 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 261 6e-68 UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 260 8e-68 UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobiu... 260 1e-67 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 259 1e-67 UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 259 2e-67 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 259 2e-67 UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing pr... 259 2e-67 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 259 2e-67 UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 258 3e-67 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 258 3e-67 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 258 3e-67 UniRef50_B9ZS17 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 258 4e-67 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 258 4e-67 UniRef50_A1HS81 Response regulator receiver modulated diguanylat... 257 5e-67 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 257 5e-67 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 257 6e-67 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 257 6e-67 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 257 6e-67 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 257 7e-67 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 257 9e-67 UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 257 9e-67 UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter Rep... 257 9e-67 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 256 1e-66 UniRef50_B3E3B5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 256 1e-66 UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 256 1e-66 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 256 1e-66 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 256 1e-66 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 256 1e-66 UniRef50_A0YKK9 GGDEF domain protein n=1 Tax=Lyngbya sp. PCC 810... 256 1e-66 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 256 2e-66 UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 256 2e-66 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 256 2e-66 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 256 2e-66 UniRef50_Q2VZ27 Response regulator containing a CheY-like receiv... 256 2e-66 UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum... 256 2e-66 UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnic... 255 2e-66 UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilu... 255 2e-66 UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 2e-66 UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 2e-66 UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-... 255 2e-66 UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 255 3e-66 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 255 3e-66 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 255 4e-66 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 255 4e-66 UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Synt... 254 4e-66 UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepI... 254 4e-66 UniRef50_Q2IF81 Response regulator receiver modulated diguanylat... 254 5e-66 UniRef50_B1Y3T8 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii... 254 5e-66 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 254 5e-66 UniRef50_Q3A5K1 Two component signal transduction response regul... 254 5e-66 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 254 5e-66 UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 254 6e-66 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 254 6e-66 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 254 7e-66 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 8e-66 UniRef50_B3E243 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 9e-66 UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 253 9e-66 UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas Rep... 253 1e-65 UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnet... 253 1e-65 UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax... 253 1e-65 UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteoba... 253 1e-65 UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas camp... 253 1e-65 UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 253 1e-65 UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=... 253 1e-65 UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliil... 253 1e-65 UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burk... 253 1e-65 UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing pr... 253 1e-65 UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID... 253 1e-65 UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 1e-65 UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 252 1e-65 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 252 2e-65 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 252 2e-65 UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 252 2e-65 UniRef50_C4XRL8 GGDEF domain protein n=2 Tax=Desulfovibrio RepID... 252 2e-65 UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=... 252 2e-65 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 252 2e-65 UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulo... 252 3e-65 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 252 3e-65 UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 252 3e-65 UniRef50_B1Y766 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii... 252 3e-65 UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 251 3e-65 UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobact... 251 4e-65 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 251 4e-65 UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthom... 251 4e-65 UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain... 251 4e-65 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 251 4e-65 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 251 4e-65 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 251 4e-65 UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobac... 251 5e-65 UniRef50_A0LBU1 Response regulator receiver modulated diguanylat... 251 5e-65 UniRef50_C9E5K7 Pas/pac/ggdef-domain containing protein n=3 Tax=... 251 5e-65 UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 5e-65 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 5e-65 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 6e-65 UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID... 251 6e-65 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 251 6e-65 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 251 7e-65 UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=De... 251 7e-65 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 250 9e-65 UniRef50_C0QDC5 Signal transduction family protein (GGDEF domain... 250 1e-64 UniRef50_Q30QW7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 249 1e-64 UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammap... 249 1e-64 UniRef50_A8UVB7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 249 2e-64 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 249 2e-64 UniRef50_C9R8E3 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 249 2e-64 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 249 2e-64 UniRef50_A4BIU7 Response regulator containing a CheY-like receiv... 249 2e-64 UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 249 2e-64 UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 249 2e-64 UniRef50_A1SVZ1 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 249 2e-64 UniRef50_D2L2B6 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW... 249 2e-64 UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 249 2e-64 UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geob... 249 2e-64 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 249 2e-64 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 249 2e-64 UniRef50_Q21HV6 Response regulator receiver modulated diguanylat... 249 2e-64 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 249 2e-64 UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax... 249 2e-64 UniRef50_B0TV39 Diguanylate cyclase n=1 Tax=Shewanella halifaxen... 249 3e-64 UniRef50_C1D6K0 GGDEF domain protein n=1 Tax=Laribacter hongkong... 248 3e-64 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 248 3e-64 UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 248 4e-64 UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing pr... 248 4e-64 UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID... 248 4e-64 UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptu... 248 4e-64 UniRef50_Q2IXE2 Response regulator receiver modulated diguanylat... 248 4e-64 UniRef50_Q31GI5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 248 4e-64 UniRef50_C8R031 Diguanylate cyclase with GAF sensor n=2 Tax=Desu... 248 4e-64 UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromob... 248 5e-64 UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerob... 247 5e-64 UniRef50_C4XH70 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 247 5e-64 UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 247 5e-64 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 247 5e-64 UniRef50_B8FCK6 Response regulator receiver modulated diguanylat... 247 5e-64 UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B... 247 5e-64 UniRef50_B9ZLB8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 247 5e-64 UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 247 5e-64 UniRef50_Q88L38 Sensory box protein n=12 Tax=Pseudomonas RepID=Q... 247 6e-64 UniRef50_Q2W220 Response regulator containing a CheY-like receiv... 247 7e-64 UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with... 247 7e-64 UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 247 7e-64 UniRef50_A0L7G7 Response regulator receiver modulated diguanylat... 247 7e-64 UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 247 7e-64 UniRef50_A4X2X1 Diguanylate cyclase n=5 Tax=Actinomycetales RepI... 247 7e-64 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 247 8e-64 UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromato... 247 8e-64 UniRef50_Q02P32 Putative two-component response regulator n=6 Ta... 247 9e-64 UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 246 1e-63 UniRef50_B1I2H9 Diguanylate cyclase n=3 Tax=Clostridia RepID=B1I... 246 1e-63 UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepI... 246 1e-63 UniRef50_Q2BIA8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Neptu... 246 1e-63 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 246 1e-63 UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 246 1e-63 UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 246 1e-63 UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 246 1e-63 UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 246 1e-63 UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelo... 246 1e-63 UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (... 246 1e-63 UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingo... 246 2e-63 UniRef50_B7KW39 Diguanylate cyclase n=3 Tax=Methylobacterium ext... 246 2e-63 UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 246 2e-63 UniRef50_D1U9W6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 246 2e-63 UniRef50_C7HZC5 Diguanylate cyclase n=1 Tax=Thiomonas intermedia... 246 2e-63 UniRef50_C5S9J2 Diguanylate cyclase n=1 Tax=Allochromatium vinos... 246 2e-63 UniRef50_Q7NQQ0 Putative uncharacterized protein n=1 Tax=Chromob... 245 2e-63 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 2e-63 UniRef50_Q2SAD1 Response regulator containing a CheY-like receiv... 245 2e-63 UniRef50_B5EIX9 Diguanylate cyclase n=2 Tax=Geobacter RepID=B5EI... 245 3e-63 UniRef50_Q1D817 HAMP domain/GAF domain/GGDEF domain protein n=3 ... 245 3e-63 UniRef50_A5F641 GGDEF family protein n=40 Tax=Gammaproteobacteri... 245 3e-63 UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobact... 245 3e-63 UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 3e-63 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 245 3e-63 UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales Rep... 245 3e-63 UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID... 245 3e-63 UniRef50_B8GSA4 Putative diguanylate cyclase n=1 Tax=Thioalkaliv... 245 3e-63 UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthono... 245 3e-63 UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 245 3e-63 UniRef50_B8FB82 Response regulator receiver modulated diguanylat... 245 3e-63 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 3e-63 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 245 3e-63 UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 245 4e-63 UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesi... 245 4e-63 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 245 4e-63 UniRef50_A4G5V3 Putative uncharacterized protein n=1 Tax=Hermini... 245 4e-63 UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 244 4e-63 Sequences not found previously or not previously below threshold: UniRef50_B6IWW6 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 251 7e-65 UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodo... 249 1e-64 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 249 2e-64 UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 248 3e-64 UniRef50_B7K273 Response regulator receiver modulated diguanylat... 248 4e-64 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 247 7e-64 UniRef50_B9MBS6 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 247 8e-64 UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 246 1e-63 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 246 2e-63 UniRef50_D1AZG2 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 245 3e-63 UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkong... 244 4e-63 >UniRef50_P76237 Uncharacterized protein yeaJ n=99 Tax=Enterobacteriaceae RepID=YEAJ_ECOLI Length = 496 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 496/496 (100%), Positives = 496/496 (100%) Query: 1 MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSI 60 MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSI Sbjct: 1 MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSI 60 Query: 61 AAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTI 120 AAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTI Sbjct: 61 AAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTI 120 Query: 121 VEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN 180 VEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN Sbjct: 121 VEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN 180 Query: 181 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI 240 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI Sbjct: 181 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI 240 Query: 241 NKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVS 300 NKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVS Sbjct: 241 NKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVS 300 Query: 301 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP 360 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP Sbjct: 301 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP 360 Query: 361 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI 420 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI Sbjct: 361 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI 420 Query: 421 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA 480 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA Sbjct: 421 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKA 480 Query: 481 SDERLYVNKQNKNSRS 496 SDERLYVNKQNKNSRS Sbjct: 481 SDERLYVNKQNKNSRS 496 >UniRef50_UPI0001A43649 putative diguanylate cyclase n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A43649 Length = 494 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 169/495 (34%), Positives = 264/495 (53%), Gaps = 21/495 (4%) Query: 11 FIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAA 70 I A L ++ L E+ R + Y+ Y+ + S+ +++ NQ+IA + RA Sbjct: 1 MIVACTTALFTALLFHEV----RNLQNYMGYVAENGKSALFHEESINQNIATRLSRAFF- 55 Query: 71 EQSEVSPEQRR-----AICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAA 125 S SP+ IC+ E+ + G NL A L GT QT +T C+ Sbjct: 56 --SRTSPDNHTDAEVAEICQHVETEGSISGFNLVAKTMNNLEGTFQTLNTSCEEWGRDIG 113 Query: 126 LLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQ 185 L + + + + A + YY+DL+ Y+Y VN + NNW Sbjct: 114 ALSVIHRTESDALPKYSFSNYTDYAFKNIRYYIDLSHNYIYINRRVNTRNYTFNNWLVNN 173 Query: 186 SG---------SIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIV 236 +I ID ++ + G ++S IYQD TK N++S+LTPV+++ ++KGI+ Sbjct: 174 GSRINIARSAHTITIDDNALDDLIRGENIVSHIYQDGYTKNNIISMLTPVFLSDKVKGIL 233 Query: 237 LLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGG 296 + D+N N+L F T DRPLLW+FL++ +TD +G +II ++ F +++ + Sbjct: 234 ITDVNINDLVVSFKTVDRPLLWKFLSLYVTDNATGANIIFHKPSIKSFDLINHDDTITQY 293 Query: 297 IRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRK 356 + + +D +Y I ++ VLF+ L IL + + +SR+N++DAMTGLYNRK Sbjct: 294 YTLHVKLDAIYVIIANIWLVLFYALITWILCRYASKQLKRQELLSRDNVTDAMTGLYNRK 353 Query: 357 ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS 416 I+TPELEQ+ + LV V IAID D LK+IND+LGH GD AI L A+ +IRKS Sbjct: 354 IITPELEQKTRTLVGRNIPVTVIAIDSDGLKRINDSLGHHMGDKAIQYLGSALGNAIRKS 413 Query: 417 DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHD 476 DY IRLGGDEFC++L+D + + + R ++ L I +K + FS G + + + DTL Sbjct: 414 DYGIRLGGDEFCLVLIDYSLTKSRDVIARAQEYLLTIDKEKLVAFSWGAHQLHQGDTLEV 473 Query: 477 AYKASDERLYVNKQN 491 A +DE LY +K++ Sbjct: 474 AMLKADELLYQHKRS 488 >UniRef50_D0YXF8 Putative two-component response regulator and GGDEF family protein YeaJ n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YXF8_LISDA Length = 517 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 117/498 (23%), Positives = 209/498 (41%), Gaps = 30/498 (6%) Query: 4 HHRMLRHFIAASVIVL-TSSFLIFELVASD--RAMSAYLRYI---VQKADSSFLYDKYQN 57 HH + + ++ V+ +S LI L+A + R + A YI ++ SS + Y+N Sbjct: 17 HHFLFKSKTWHNIFVVGINSLLIIGLIAFNLYRQIDANKNYIDSNLKLVKSSMMTLAYRN 76 Query: 58 QSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDC 117 A V + L + + + + S N G N + L G+L Sbjct: 77 DRYAQTVTKTL--KDVSIMSQPGLVSINTYPSMNE-FGFNRGIYPDNLLNGSLIGVGKPS 133 Query: 118 DTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFA 177 + I L D ++ + +YY+ RY Y ++ F Sbjct: 134 EAIYHDTNLFQILDDLWAEQHRRNITYN---------YYYISHQHRYFYLSSKYSLNDFN 184 Query: 178 MNNWSFLQSGSIGIDRKDIEKVFTGRT--VLSSIYQDQRTKQNVMSLLTPVYVA-GQLKG 234 M F + R D+++ T + + Y+D T V+++ +PV+ A + G Sbjct: 185 MTK-DFFTTDFYSQQRSDLQQESTLKKGFYFTPPYRDFFTHDMVITIKSPVFSAKDIIIG 243 Query: 235 IVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLP 294 V +DI +L ++LN+ L D + I + + + +++ + Sbjct: 244 DVGVDIPVKSLMRAITLP--NDFKQYLNIYLYDDIKKQTITLYDGKRSYLPWINMNRQIN 301 Query: 295 GGIRVSLSIDILYFITSSWKSVLFWILTALIL---LNMVRMHFRLYQNVSRENISDAMTG 351 + + I Y + SS + + I+ + L ++++MH E +D++TG Sbjct: 302 DTLSIHAEISSWYILYSSIQDISLIIVLIIALNYMYSLLKMHKAQKNEYKIEAYTDSLTG 361 Query: 352 LYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQ 411 LYNR+I+ + LQ+ + S V FI ID + K IND GH GD+A+ +A I Sbjct: 362 LYNRRIIKSSVMPLLQEAKDTHSPVSFIIIDANDFKIINDNYGHDVGDMALKHIANQIFA 421 Query: 412 SIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR---LQHIAPQKEIGFSSGIYAM 468 R SD IRLGGDEFCI+L ++T A L R+E ++ + + ++ Sbjct: 422 LSRSSDICIRLGGDEFCIVLPNTTIGQAHSLSRRLELAVYGIKFYSQKITTTITTSCVQY 481 Query: 469 KENDTLHDAYKASDERLY 486 +TL + + +D+ LY Sbjct: 482 DGEETLEETFARADKILY 499 >UniRef50_Q6LT28 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LT28_PHOPR Length = 493 Score = 354 bits (908), Expect = 5e-96, Method: Composition-based stats. Identities = 112/494 (22%), Positives = 212/494 (42%), Gaps = 31/494 (6%) Query: 15 SVIVLTSSFLIFELVASD-----RAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALA 69 S+I+L +S +I ++ + ++YL + SS L Y+N+ A ++ LA Sbjct: 4 SLIILVNSIVILLAISINIRNEIENTTSYLESNLSIIKSSLLTLAYRNERYAKYIS--LA 61 Query: 70 AEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPA 129 + Q + N G N +K L GTL + + + P Sbjct: 62 VNNNNNQLGQSLVTVHHYPELNE-FGFNRGQYKDNLLNGTLVGIGEPSPSALTDTFIFPT 120 Query: 130 FDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSI 189 D H + + ++ ++Y+ +F P N+ F +++ + S Sbjct: 121 IDDLWAEKHHLNINYNYYYVSYLNEYFYVSSKYTSTFFKLPPNI--FETQDYN--EQRSY 176 Query: 190 GIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIF 249 K+++K F S Y D TKQ + S+ +P+Y ++ G + +D+ ++ + Sbjct: 177 YKSEKELKKGF----YFSQPYIDIVTKQKIFSIKSPIYSNDKIIGDIGVDVPLTSITSAI 232 Query: 250 YTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFI 309 L + + L + ++II+ + + + + + + +DI Y + Sbjct: 233 TLPK--ALHSSIFIYLYAMSTQQEIILRKGLHIFWPIIDVQKTIDDFLHIHAEVDIRYVL 290 Query: 310 TSSWKSVLFWILTALIL---LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL 366 S+ ++ ++ ++L + V H Q +E +D +TGLYNR++L + + Sbjct: 291 RSAAPNIALVLILIILLNYLMMRVERHKIQQQTYKKEARTDLLTGLYNRRVLLSIVVNLI 350 Query: 367 QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE 426 ++ S ++V I ID + K IND GH GD A+ ++ I R +D IRLGGDE Sbjct: 351 EQCRISYNAVSLIVIDANGFKAINDNYGHDIGDAALKHISSQIFLLSRSTDICIRLGGDE 410 Query: 427 FCIILVDSTPQIAAQLPERIEKRLQ-----HIAPQKEIGFSSGIYAMKENDTLHDAYKAS 481 FC+IL T A +L R+E + H I S ++ ++T+ +A + Sbjct: 411 FCLILPYVTQAQALKLASRLESSISITRFCHHDIYTSITTSC--TQIQADETIDNALIRA 468 Query: 482 DERLYVNKQNKNSR 495 D++LY NK +R Sbjct: 469 DKQLYKNK---RNR 479 >UniRef50_C8QGL2 Diguanylate cyclase n=1 Tax=Pantoea sp. At-9b RepID=C8QGL2_9ENTR Length = 550 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 99/538 (18%), Positives = 189/538 (35%), Gaps = 54/538 (10%) Query: 6 RMLRHFIAASVIVLTSSFLIFELV----ASDRAMSAYLRYIVQKADSSFLYDKYQNQSIA 61 + H +V + ++ + E + + + A L I + DS F + Sbjct: 14 FLPVHLCFLAVFLFSAFLTVHEALELKTSYEDRQRAQLAEIQKNLDSQFQESVDELVYYQ 73 Query: 62 AHVMRALAAEQSEVSPEQRRAICEAFESAN--NTHGLNLTAHKYPGLRGTLQTASTDCDT 119 + AL + + R + F++ L L + + L G Sbjct: 74 KMLSYALMHP---LDSDNAREAVQRFQTLRQRPLWQLQLNSPRSMPLNGVGDAWLARDPL 130 Query: 120 IVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMN 179 + +AL+ +A + +Y+ Y+ P Sbjct: 131 LKRDSALIDQEIRAALEFSFIMQFSD-PDHDFHSRFWYISRAGFYIS-SRPPQSPQELEQ 188 Query: 180 NWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLD 239 +++ + + D ++ + + +S YQ + +++L P+ G G++ +D Sbjct: 189 SYATMVQRAYFRA-LDPQQNISPQLRWTSGYQGLFDEGLMLTLSAPIISNGYWYGVLSMD 247 Query: 240 INKNNLRNIFYTHDRPLLWRFLNVTLTDTDS----------------------------- 270 + +RN+ LL L + Sbjct: 248 FPQARIRNLLAETRHTLLQGNLVFLDRKMNEVTRLHAPDEIPLNAEHRQELLNRMQHERS 307 Query: 271 -----GRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALI 325 G N+ Y+ V L G++ L L+ ++ +L + + Sbjct: 308 GILRLGTQFASWSKLTNVDGYIINVQTLKQGMKQELGRVTLFLLSMWLLFILMLAVAHQV 367 Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + +VR L + ++ D +T L NR + + Q + I +D+D Sbjct: 368 IFRLVRRQDELSERLTWRANYDGLTRLLNRSAFFEQFVAQAAHCQQLQRPLSVIQLDVDH 427 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K++NDT GH GD A+ +A I ++RK D A R+GG+EFCI+L ++T A+ + ER Sbjct: 428 FKKVNDTWGHHAGDQALIRVASVISHTLRKYDVAGRIGGEEFCIVLPETTLAEASAVAER 487 Query: 446 IEKRLQHIAP------QKEIGFSSGIYAMKEND--TLHDAYKASDERLYVNKQNKNSR 495 I RL I S+G+ + +E +D RLY+ K N +R Sbjct: 488 IRARLAAKTILVNASTTFNITLSAGVTSSEEQGDYDAESLQAKADSRLYLAKTNGRNR 545 >UniRef50_Q04NQ1 GGDEF family protein n=7 Tax=Leptospira RepID=Q04NQ1_LEPBJ Length = 535 Score = 351 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 89/517 (17%), Positives = 194/517 (37%), Gaps = 33/517 (6%) Query: 1 MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSI 60 +K+ R+L + A + VL FLI+E + + + + + Q +++ Sbjct: 14 VKIKKRILFSLL-AIIFVLLLFFLIYENLRMKKEIDRVVGMRTRVMKDYIRRVGSQTRAL 72 Query: 61 AAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTI 120 + L + + + + + N + G T ++ Sbjct: 73 GLSISDYLTFYEDTFANPSLVKKFKNYPNINR---FGIPHISRENKEGADSGTLTAIGSV 129 Query: 121 VEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN 180 + + + + S E Y +++Y E + + Sbjct: 130 YKLNP--SLLKEIEAALNLRGQFESLTEKQSEVVWAYYLSKQKFLYITPKFKDENYYFTD 187 Query: 181 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI 240 +L + + TGR +++ +Y D K ++++ PVYV + G+ +DI Sbjct: 188 DLYL---GPYWTQATPQINPTGRQIITDLYDDLAGKGLMITISEPVYVNEKFIGVASIDI 244 Query: 241 NKNNLRNIFYTHD---RPLLWRFLNVTLTDTDSGR----------DIIINQSEDNLFQ-- 285 + ++ I + D +L + + + + +I+ + + Sbjct: 245 GLDAMQRILESGDCIGESMLIDENGKIIAKSGTFKLDTRLPLPVITMIMEPQDLFFLEKG 304 Query: 286 -YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFW---ILTALILLNMVRMHFRLYQNVS 341 + I + I I +I K++L + + T I+L + V+ Sbjct: 305 SFWIRNKIKDEEIWLVHEIKIFEYIIYIIKNLLPFWVLVFTFFIVLILYVKLRSSMNQVA 364 Query: 342 RENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLA 401 + +D +TG++NR+ ++ L + G + +D+D KQ+ND GH GD Sbjct: 365 KLIHTDPLTGIWNRRGFLKLTQRSLTIGNRHGKDWTILLVDIDHFKQVNDKFGHDTGDKT 424 Query: 402 ITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH---IAPQKE 458 + +AQ + +SIR++D R GG+EF I L + + + E + K +++ + Sbjct: 425 LIKVAQVLSRSIRQTDAVCRWGGEEFAIFLFGVGQKASTDIAEDLRKEVENQVRLDDGNP 484 Query: 459 IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S G+ L +A+ +D+ LY K + +R Sbjct: 485 VTLSIGVSQ--GTLDLEEAFVNADQALYRAKSSGRNR 519 >UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID=C6DCR6_PECCP Length = 532 Score = 318 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 112/536 (20%), Positives = 212/536 (39%), Gaps = 69/536 (12%) Query: 1 MKLHHRMLRHFIAASVIVLTSSFL----IFELVASDRAMSAYLRYIVQKADSSFLYDKYQ 56 + L +L I + +I LT++++ + + + +D+ +++ L Y + A ++ + Sbjct: 9 VNLRSLILSLAIISMLITLTNAYIAVYNVQKKLITDQILNSNLNYSSKLAATTESFLSSA 68 Query: 57 NQSIAAHVMRALAAE--QSEVSPEQRRAICEAFESANNTH---GLNLTAHKYP---GLRG 108 Q +A + ++A E+ +S N+ N YP L+G Sbjct: 69 QQELA-YSATSIADNFSDDAALLEKSEQTYHMSQSFNSIFVADTQNQIHAVYPTSLNLKG 127 Query: 109 TLQTASTDCDTIVEAAALLPAFDQAVEGNRH-------QDDYGSGLGM------------ 149 + T+ +VE L+ +V GN +D G+ LG Sbjct: 128 STLTSEASKLALVEQKPLISQPYISVTGNLIVLVSSPIKDKQGNYLGYIGGTIYLKNKSV 187 Query: 150 --AEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLS 207 H+Y D + VY + + + + + S + I+ F + + Sbjct: 188 LNEFMNTHFYNDYS--SVYVIDKSGIVLYHQDKQWVGKPVS----NQKIKDAFRDKKSGT 241 Query: 208 SIYQDQRTKQNVMSLLTPVYVAGQLKGIV-----LLDINKNNLRNIFYTHDRPLLWRFLN 262 + D + ++ T V +G + + ++D+ + +R++ Y + + Sbjct: 242 AAMPDMQGTPSLAGFDT-VNSSGWIIITLHPSQTVIDLLSSVMRSVLYEGAPVMALTLIA 300 Query: 263 VTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILT 322 +TL + L + + PG I + YF K V+ + Sbjct: 301 LTLLAFSIANPL-------RLLAVSASKMEEPGVIEKIKKVPSWYFEVEQLKRVILFGTL 353 Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 L + +S + +D +TGL NR+ + +E L K Q V I ID Sbjct: 354 LL---------HKRIGKLSLQAHTDPLTGLLNRRGIYESIELILPKSNQ----VAAIVID 400 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K++NDT GH GD I LLA++IKQ R+SD R GG+EF +L D+ + A + Sbjct: 401 IDHFKRVNDTYGHNIGDDVIRLLAKSIKQGSRESDLICRTGGEEFLALLPDTDMKQAVDI 460 Query: 443 PERIEKRLQHIAPQKE--IGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 ER+ K+++ + I S G+ + + + K +D+ LY K +R Sbjct: 461 AERLRKKVEKMPLPIPENITISLGVTCFIPGAEQIDNVLKIADDALYQAKHEGRNR 516 >UniRef50_A4SKF7 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SKF7_AERS4 Length = 529 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 94/483 (19%), Positives = 175/483 (36%), Gaps = 41/483 (8%) Query: 39 LRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESA--NNTHGL 96 L ++ L ++Q MR A E+ +P+ + +++ + G Sbjct: 51 LNERDTLNMAARLRSQFQQMETVLEAMRGQAEERLRSNPQSAL-TRQLYQALRTDPELGF 109 Query: 97 NLTAHKYPG---LRGTLQTAST-DCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEE 152 +L L G L A L A + + G + Sbjct: 110 SLDKVPANLPAGLSGNLTGLGRLPAPGSEREARLHLALSLSPLLSTASKLLGD------K 163 Query: 153 KFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQD 212 Y D ++Y Y + F + +L+S ++ + R ++S Y+D Sbjct: 164 VAWLYFTGVDDFIYLYPWIPSSEFRFHRAIYLKS---YWQDALKQQNPSQRAIVSRPYED 220 Query: 213 QRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPL----LWRFLNVTLTDT 268 + ++SL P+ L G++ +D+ L + + + L L + Sbjct: 221 FAGEGQMISLSQPIVKDQVLVGVISIDVLLERLDRLLHESTPAIGTLFLVNQHQQILASS 280 Query: 269 DSGRDIIIN-QSEDNLFQY----VSYVHDLPGGIRVSLSIDILYFITS-----SWKSVLF 318 G D + Q++ + +Q+ + V +P + L +T S S++ Sbjct: 281 AQGADFVPKFQTDRHGYQWRQGALQLVQTIPDTQLTLIHRIPLTALTQALFWHSLPSLIT 340 Query: 319 WILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 L+ ++ RL + + + DA+TG YNR E+ + V Sbjct: 341 IFFMMWAALSSLKAR-RLNRQLDYLSSHDALTGTYNRHYFDE-FERLHLRAK--AREVGV 396 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 + D D KQ+ND GH+ GD + L + ++K D IR GG+EF ++ + Sbjct: 397 VMFDCDHFKQVNDRFGHEVGDQVLIRLVTLCQPLLKKEDALIRWGGEEFLLLARG--REP 454 Query: 439 AAQLPERIEKRLQHIA-----PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKN 493 QL ER+ ++ P + S G + + L +A +D LY K N Sbjct: 455 LEQLAERLRLQIAEHPWEEIAPDLAVTISLGYHHCRAGTPLKEAIHRADLALYQAKANGR 514 Query: 494 SRS 496 +RS Sbjct: 515 NRS 517 >UniRef50_B5YAI6 Ggdef domain n=2 Tax=Dictyoglomus RepID=B5YAI6_DICT6 Length = 1073 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 94/512 (18%), Positives = 190/512 (37%), Gaps = 59/512 (11%) Query: 31 SDRAMSAYLRYIVQKADSSFLYDKYQNQSIAA---HVMRALAAEQSEVSPEQRRAICEAF 87 + + + YI Y + ++ A H R + ++ +E S ++A E Sbjct: 365 INPQLGYFQDYISILRRFLIYYIEKEDLIFAENLWHQARVMISDYAERSQGYQKARLEED 424 Query: 88 ESANNTHGLNLTAHKY-----PGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDD 142 G+NL + L+ L +Q N+ Sbjct: 425 FQELTGFGINLISSFDKSSIINSLKENLPNLGIKS---------FYIIEQEDSQNKKNLL 475 Query: 143 YGSGLGMAEEKFHYYLDL-------NDRYVYFYEPVNVEY----FAMNNWSFLQSGSIGI 191 +G + + L R+ Y EP+ + +A+ +S L I Sbjct: 476 FGLSEDSEYKDIDFSNGLIPKNVLPKRRFTYIVEPLYFQDTFFGYALFEFSNLHRFFYEI 535 Query: 192 DRKDIEKVFTGRTVL--SSIYQDQRTKQ-NVMSLLTPVYVA--GQLKGIVLLDINKNNLR 246 R I G + Y++Q + +S+L + ++ ++ D+ + + Sbjct: 536 LRAQISSGIQGARLFEERKEYENQLIEHIKELSILNEIGNTITSSIELELIWDLVSSKIA 595 Query: 247 NIFYTHDRPLLWRFLNVTLTD-------------TDSGRDIIINQSEDN--LFQYVSYVH 291 N+F + L+ L D +DS + II++ ++N + + + Sbjct: 596 NLFDYNVFYLILLDEEKNLLDIKVKKVKKGNGKLSDSDKKIIMDSIKNNKPILRKGQKKN 655 Query: 292 DLPGGIRVSLSIDILYFIT----SSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISD 347 L + + F+ + L + T +++ + L++ + D Sbjct: 656 ILCVPLITGRGVKGAIFLKHEKDIYTEKTLNLLKTIANYISIAIENALLFEETKKLATID 715 Query: 348 AMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQ 407 +TG+ NR+ L + +++ + + + ID+D K NDT GH GD + LA+ Sbjct: 716 PLTGILNRRALEEAFNKDVERAKRYNRPLSAMVIDVDDFKLFNDTYGHLFGDQVLKELAK 775 Query: 408 AIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP------QKEIGF 461 ++ S RK+D R GGDEFCIIL ++ Q A + ER+ K ++++ + I Sbjct: 776 TLRNSCRKTDIVGRYGGDEFCIILPETNLQGATKFAERLLKNIRNLTVVTPDNNKIPIKV 835 Query: 462 SSGIYAMKEND-TLHDAYKASDERLYVNKQNK 492 S G+ + ++ +D +Y K + Sbjct: 836 SIGVASYPDDTYEPEKLLTLADTTMYKAKTSG 867 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 297 bits (760), Expect = 8e-79, Method: Composition-based stats. Identities = 72/373 (19%), Positives = 139/373 (37%), Gaps = 21/373 (5%) Query: 127 LPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFL-- 184 FD GN + + ++ + V + ++FL Sbjct: 140 FSIFDLGKGGNDRDTIGFKYTFPVTDGNIFIGNVEFTLPFSAVRVEMRKIFRGEYNFLII 199 Query: 185 QSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNN 244 + + ++ + + Y ++ + V+ P ++ + L I Sbjct: 200 KDLIYSKKFSEEKQNYIQSEIDPDFYYEEDPEFKVIRWNIP----EEIISEINLQIRNKL 255 Query: 245 LRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSID 304 N+ + + D I I+ ++ Y+ Y + Sbjct: 256 KGNLEDFKPKSIAVDING----DYYIASFIPISNKKEKYIGYLVYYEKDNTYGVFKNTFI 311 Query: 305 ILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQ 364 I Y ++ +LT +L +++ F+ D +TG+YN+ L+ Sbjct: 312 ISYV---GINLLVGLLLTMSFILGVIKERFKA------MAEIDTLTGIYNKGKFNHLLQV 362 Query: 365 RLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGG 424 L + + G + I D+D K+IND GHQ GD + LA+ + +IR +D+ R GG Sbjct: 363 ELDRSKRYGRPLSLIIFDIDHFKKINDAFGHQAGDYVLKTLAKIVSSNIRSTDFFARWGG 422 Query: 425 DEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASD 482 +EF I+ ++ + A L E+I K ++ + ++ S G+ ENDT+ K +D Sbjct: 423 EEFVILAPETDLEGAQILAEKIRKAIEEYPFETVGKVTSSFGVTEAFENDTVDSFVKRAD 482 Query: 483 ERLYVNKQNKNSR 495 LY K +R Sbjct: 483 VALYKAKDKGRNR 495 >UniRef50_B8KV43 Sensory box histidine kinase n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV43_9GAMM Length = 494 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 70/404 (17%), Positives = 152/404 (37%), Gaps = 25/404 (6%) Query: 115 TDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDR------YVYFY 168 T + A A ++A+ + G L + + Y DL D ++ Sbjct: 80 TPNQDFIHDALAHFAVEEAILHRKRGIKPGMFLSLLKYYRQAYTDLVDERCADSPHIKTL 139 Query: 169 EPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYV 228 ++ F + + + + K ++++ T L++ T SL TP ++ Sbjct: 140 RHFVLKRFDLLEIALVTEWNSTPMDKVVDELSTTNRKLTNEKNFYLT--AFESLGTPAFL 197 Query: 229 AGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQS--------- 279 + + +L + + +T D D + +I Sbjct: 198 LDHELEVTDANQAAVSLLTGMNARAGEVYYDAAAITGHDQDFVSENVILNRPVTELMPEL 257 Query: 280 EDNLFQYVSYVHDLPGGIRVSLSIDI--LYFITSSWKSVLFWILTALILLNMVRMHFRLY 337 D + + G + +++ + +F + + +++ L + + Sbjct: 258 TDFIGKRCDTEAQKSGDVSMTIRDEDYDFFFDQHPLQDISGQFAGSIMFLKDISDRKAVE 317 Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + D +TG NR+ L ++ L + + + +D+D K +ND GH Sbjct: 318 RRLKAIADKDPLTGAGNRRALESVIKSELSRAHRHDEPLSVAILDIDWFKSVNDNYGHLM 377 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ- 456 GD + +A+ K IR D R+GG+EF ++L ++ A +L ER+ +R+ Q Sbjct: 378 GDRVLIDIAKLCKDLIRPYDTFARIGGEEFALLLPKTSVPEAERLAERLRQRVAEHTTQA 437 Query: 457 ----KEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 ++ S G+ + + TL + +++D LY K + +R Sbjct: 438 GENRVQVTISIGVALLAKGAKTLEEMIESADRALYCAKLDGRNR 481 >UniRef50_B6BJE3 GGDEF domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJE3_9PROT Length = 648 Score = 287 bits (734), Expect = 9e-76, Method: Composition-based stats. Identities = 77/440 (17%), Positives = 158/440 (35%), Gaps = 48/440 (10%) Query: 102 KYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLN 161 Y + G + + LL + N+ + + M + + + Sbjct: 207 PYNDIAGAGVLITASYPIYDKNEKLLGVASHDITVNKVAESILNETTMHKGSISFLISKQ 266 Query: 162 DRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKV-FTGRTVLSSIYQDQRTKQNVM 220 + + P ++ N + K+ ++ TV + Y ++ Sbjct: 267 GKVISSTNPDQMQEIQKQNKQEYKGNFYYRTIKNAKENGLNDITVSTHEYL-NELGDEIV 325 Query: 221 SLLTPVYVAGQLKG----------------------IVLLDINKNNLRNIFYTHDRPLLW 258 S + PV I++ + K ++ + + L Sbjct: 326 STIKPVKDVNTALWNSSIGFFHDKLLMVSQIPATEWILVSCVPKESIVDETRSIFYQTLL 385 Query: 259 RFLNVTLTDTDSGRDIIINQSEDNLFQYVSYV--HDLPGGIRVSLSIDILYFITSSWKSV 316 L++ +T I+ + ++ H G V + + + + + + Sbjct: 386 -ILSIFITTLFIFSGILTMRHLIAPLDIINKASKHFGDGYTDVKVQYSNMNLLKTLFDTF 444 Query: 317 LFWIL---------------TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPE 361 + L + + + + + + +DA+TG++NR+ Sbjct: 445 NIMVEKVKFNQQLLEEKVYERTAKLQKEINRRKTVEEELRKISRTDALTGIWNRRYFFEM 504 Query: 362 LEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIR 421 L++ + + + ++ + ID+D K INDT GH GD AI + I ++RK + R Sbjct: 505 LDREISRSQRYDINMSLLMIDIDLFKNINDTWGHDIGDKAIKHVVNIINSNVRKENIFSR 564 Query: 422 LGGDEFCIILVDSTPQIA-AQLPERIEKRLQHIA-----PQKEIGFSSGIYAMKENDTLH 475 LGG+EF IIL+++ + ERI K ++ + +I S GI + NDT + Sbjct: 565 LGGEEFGIILIETKVPYTPQSISERIRKSIEAVPLIIDEKSIKITVSIGIANIMNNDTAN 624 Query: 476 DAYKASDERLYVNKQNKNSR 495 Y SD LY+ K+N +R Sbjct: 625 TLYVRSDRALYLAKENGRNR 644 >UniRef50_C4RZH3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=C4RZH3_YERBE Length = 431 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 11/312 (3%) Query: 188 SIGIDRKDIEKVFTGRTVLSSIYQDQ--RTKQNVMSLLTPVYVAGQLKGIVLLDINKNNL 245 + I + + G+ +D+ +Q + P+ + L+ ++D N+ Sbjct: 123 GLYIAENVLTQPNMGQLCSKPYRRDEQGFYEQLFNTNTAPMLLIDPLREGQIVDANQAAT 182 Query: 246 RNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDI 305 R Y+ D + + D + + ++++H L G + Sbjct: 183 RFYGYSRDEMCMKHTWEINTMGRDVLPVMNEVARLPGGHKPLNFIHKLADG-------NT 235 Query: 306 LYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQR 365 + T + L + L +++ + RL Q + + D +T L NR+ P +E Sbjct: 236 RHVQTYAGPVELDGVRLMLCIIHDITEQKRLEQALEHAALRDPLTDLGNRRQFFPLVEHA 295 Query: 366 LQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGD 425 + + G I +D+D K IND LGH +GD + LLA+ ++ IR+SD R GG+ Sbjct: 296 HAQSQRYGHCFSLILLDVDHFKSINDQLGHNKGDEVLILLARTLESIIRESDSVFRWGGE 355 Query: 426 EFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDE 483 EF I+L + + A QL E I + +Q I ++ S G+ + + +K DE Sbjct: 356 EFTILLPLTHLEGALQLAESIRETIQMICQPNLPQLTVSIGVAQHQSGEDTDSLFKRMDE 415 Query: 484 RLYVNKQNKNSR 495 LY K + +R Sbjct: 416 ALYRAKASGRNR 427 >UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Y8_SULSY Length = 492 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 81/391 (20%), Positives = 157/391 (40%), Gaps = 18/391 (4%) Query: 120 IVEAAALLPAFDQAVEGNRHQDDYGS------GLGMAEEKFHYYLDLN--DRYVYFYEPV 171 I + D V H D E + +D N D VY Y P+ Sbjct: 99 IGFDRFIFTLPDGTVYLRMHNFDRYGDKISEIAEIANYENNYLSIDKNLLDSLVYLY-PI 157 Query: 172 NVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQN---VMSLLTPVYV 228 + + D+ F + K+N + S L+P Y Sbjct: 158 FLNN--KRVCDVYLNVPFYKISDDLANTFNKSYLFIIKKDFLNLKENKGYIQSDLSPDYF 215 Query: 229 AGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVS 288 +L N+ ++ + + + + S I + F + Sbjct: 216 VESKFYNQILKTKNNDSFSLSEINKKAKKEIDKKLREEVSFSYPIDINGNTILMTFMLIK 275 Query: 289 YVHDLPGGIRVSLSIDILY--FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENIS 346 +++ G +S D + F S + + + +I+ + +L ++ I+ Sbjct: 276 SFNNISIGYLISYEADTTFKVFSKSFYIMISSLLFIMIIINIFIINIIKLKNVAEKKAIT 335 Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL+NR I+ ++ +++ ++ + + D+D K+INDT GH +GD A+ +A Sbjct: 336 DKLTGLFNRSIIDTLIQVEIERAKRNNKPISILLFDIDHFKKINDTYGHDKGDYALKTIA 395 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSG 464 + ++++RKSDY +R GG+EF IL ++ A ++ E+I +++ + + S G Sbjct: 396 EIARRTLRKSDYVLRWGGEEFLAILPETDLDGATKVAEKIRSNIENYNFKDIGRVTVSIG 455 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + +K + L +A K +DE LY K +R Sbjct: 456 VTMLKIGEPLDNAIKRADEALYAAKNKGRNR 486 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 141/347 (40%), Gaps = 13/347 (3%) Query: 157 YLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGID-RKDIEKVFTGRTVLSSIYQDQRT 215 Y N Y+ + V + L +KD+ VF + + + Sbjct: 117 YRKFNPDYIDGQQLVYALKYKNKFLGNLYFSIPFWAIQKDLNYVFKDTYLFLLKKEVGLS 176 Query: 216 KQNVMSLLTPVY----VAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSG 271 + ++ + + + I + DI + L + + + G Sbjct: 177 RLKAGAIKSIIPSGLSDRYYYEDIQIKDIPITYINKKIRKKVLKFLGKDKPFSFIYNNEG 236 Query: 272 RDIIINQSEDNLFQYVSYVHDLPGGIR-VSLSIDILYFITSSWKSVLFWILTALILLNMV 330 +I + + L G + S + S + ++ L A+IL V Sbjct: 237 NFYLI-----TFIPVFNLNNHLMGYLVRYSKDNTYPIILKSFYTNITLSFLLAVILGFSV 291 Query: 331 RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIN 390 + + + + +D +TGLYN+ L++ +Q+ + + I D+D K+IN Sbjct: 292 YIFLKDLEKFRYLSETDRLTGLYNKGKFNEVLQREIQRAKRYKRPLSLIIFDIDHFKKIN 351 Query: 391 DTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 DT GH+ GD + LA+ IK++IRK+D+A R GG+EF I+ ++ + A +L E++ + + Sbjct: 352 DTYGHKVGDEVLKALAKLIKKNIRKTDFAARWGGEEFVILAPETNVEGAKKLAEKLRQAV 411 Query: 451 QHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + ++ S G+ ++ ++ D +D LY K+ +R Sbjct: 412 ETYKFPTVGKVTISLGVAQLEPDEKPEDFIVRADMALYKAKEGGRNR 458 >UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLY1_DESAH Length = 440 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 78/420 (18%), Positives = 150/420 (35%), Gaps = 24/420 (5%) Query: 92 NTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAE 151 + GL+ + + ++G + A +A + LG+ + Sbjct: 27 SITGLSKSLIEALDVKGKDLELG-PHEEYTSDPASHFGRIEAERHRQRGISIDMFLGLMK 85 Query: 152 EKFHYYLD------LNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTV 205 Y D D Y YE + +F F + D ++++ V Sbjct: 86 YYRQSYSDLIRESKFKDDIKYQYEQIIKRFFDRVEIGFCTEWASTGDEDIVKELQRNNRV 145 Query: 206 LSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTL 265 +++ T SL PV++ G L G + +N Sbjct: 146 MTNEKNKYLT--IFESLSMPVFIVG-LDGTI-----ENMNHAASGMLHYDTAPGTQYYGE 197 Query: 266 TDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKS--VLFWILTA 323 DT I + D F+ D +++ +F S +S + A Sbjct: 198 KDTLKLFFIEVFPWLDKSFKNFISGTDTKKTFETAINDKGQFFFISFSRSLDISGKFSNA 257 Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 + ++ + + + + + +D +TG NR+ E+ +++ + ++ + ID+ Sbjct: 258 IAIIEDITKRKTMEKELEKLATTDPLTGAKNRRSFLNLFEKEMKRSKRYNYTLALVMIDI 317 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 D K+IND GH+ GD + LL +R SD R GG+EF I+L ++ A+ Sbjct: 318 DHFKKINDNFGHETGDKILNLLVAKCHSVLRDSDIFARWGGEEFIILLPETDLLQASSAA 377 Query: 444 ERIEKRLQHIAP------QKEIGFSSGIYAM-KENDTLHDAYKASDERLYVNKQNKNSRS 496 ER+ L S G +N + + K +D+ LY+ K+ +R+ Sbjct: 378 ERLRGALAQSELRTNDGTNINFTVSIGFTIFGNKNILIDEIIKKADKALYLAKKQGRNRA 437 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 5/180 (2%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 + ++ H + + + +D +TGL NR+ LE +Q+ + G+ + I+ Sbjct: 527 IVYCGIITDTTEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALIS 586 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 ID+D+ K++NDT GH GD + LA + +R D R+GG+EF ++L D+ P+ A Sbjct: 587 IDVDRFKRVNDTWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAM 646 Query: 441 QLPERIEKRLQHIAP-----QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + ER+ ++ + S G+ A D + +D LY K +R Sbjct: 647 AVAERLRAGVEAAPLLTTAGPLTVTLSLGVSASPPCDGADTLLREADRALYRAKAGGRNR 706 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 113/267 (42%), Gaps = 13/267 (4%) Query: 234 GIVLLDINKNNLRNIFYTHDRPLLWRFLNVT----LTDTDSGRDIIINQSEDNLFQYVSY 289 G++++D + N+ + + + + + + + Sbjct: 398 GVMVVDAKTFRIENVNLEAAAMIGASPEEIIGKSCFEIFPESKGLCLITAVGQEMDWAER 457 Query: 290 VHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAM 349 + G ++ + + T S + ++ + + +L + + R +I+D + Sbjct: 458 ILHRMDGSQLPVLKIVKRLRTKSGEKLIETFI-------DLTERKKLEEQLYRLSITDYL 510 Query: 350 TGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAI 409 T YNR+ T LE+ +++ ++ I +D+D K +ND GH GDL + LA I Sbjct: 511 TQAYNRRYFTEMLEREIERAKRTKMPFALIMLDIDHFKNVNDRFGHAAGDLVLKTLANLI 570 Query: 410 KQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIAPQKEIGFSSGIYA 467 K IR++D R GG+EF I+L ++ + AA L E + ++L I + S G+ Sbjct: 571 KNRIRQTDCLARWGGEEFVILLPNTPVEKAAGLAEELREQLSMLEIPGVGRVTASFGVTG 630 Query: 468 MKENDTLHDAYKASDERLYVNKQNKNS 494 DTL +D+ LY K + + Sbjct: 631 YCPGDTLDTLLMRADQMLYTAKASGRN 657 >UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZT6_DESAD Length = 442 Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 133/344 (38%), Gaps = 13/344 (3%) Query: 160 LNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQD----QRT 215 D P+N F + + +G + K + + Y + Sbjct: 100 YMDFTKSLKLPLNTRLFVSTKLNINKLSELGDFPLAVTKDGYAESYIREKYPEIKLVSYP 159 Query: 216 KQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDII 275 +NV+S +V + ++K + + FY + + + R I Sbjct: 160 NENVISDSRLAFVTDYPAAM--YHLHKMGIHDKFYVAETLYTKQLHAAVSKGNKNLRKFI 217 Query: 276 INQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSW--KSVLFWILTALILLNMVRMH 333 ++ Q ++ + ++S+ +F+ ++ ++ L + + R Sbjct: 218 EEGMQNIPDQEINRITQK---WIQAVSVTPDWFLPTAIAGFGIMAGGFIFLYIFTLKRQV 274 Query: 334 FRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTL 393 + + + + +D +TGLYNR+ + + + + + + FI ID+D K INDT Sbjct: 275 ASRTEELRQMSQTDMLTGLYNRRKMDEIMHHEFDRFKRYNTPITFILIDIDNFKTINDTY 334 Query: 394 GHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI 453 GH GD + A+ + + RK+D R GG+EF ++ ++T + E++ +R+ Sbjct: 335 GHAVGDNVLVRFAEILISNTRKTDRIGRWGGEEFIVVCPETTSGEGMIIAEKLRQRIAET 394 Query: 454 APQK--EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S GI + + D + D LY +K+ ++ Sbjct: 395 RFPTINNCTASFGITEINQQDDFMSLFARCDTALYSSKEQGRNK 438 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 274 bits (700), Expect = 8e-72, Method: Composition-based stats. Identities = 71/430 (16%), Positives = 156/430 (36%), Gaps = 40/430 (9%) Query: 85 EAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYG 144 + F +N +N G+ L T+ L+ A + + Sbjct: 58 QMFVGLDNLL-INNDKTHLNGINDVLLRLKTNN--SYLMDLLIVAPSGEIVNWSRSEAPP 114 Query: 145 SGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRT 204 Y+LD + + +P + W F S + ++++ Sbjct: 115 DITERDY--LRYHLDHKNSAFFIGKP-QLSKVHNQRWFFGFSKAERDQYGRLKRILVAII 171 Query: 205 VLSSIY---QDQRTKQNVM--------SLLTPVYVAGQLKGIVL---LDINKNNLRNIFY 250 + +Y ++ ++++ ++ T + Q+ G + N ++ + Sbjct: 172 DIDHLYGRYRELDLPEDMIITISSEDGTIYTRIPGHEQVVGQNFPGGTKLLCNLKKSKIF 231 Query: 251 THDRPLLWRFLNVTLTDTDSGRDIIINQ-SEDNLFQYVSYVHDLPGGIRVSLSIDILYFI 309 P+ L +L I +EDN F L GG + + Sbjct: 232 HGASPINGERLFASLERVGDTSMIAAVSINEDNFFADWRRHSLLMGGFGLVVG------- 284 Query: 310 TSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKL 369 +++ + + FR+ Q + ++ +D +TG+ NR+ + +++ Sbjct: 285 -------AILFTLSILTVRSQQEQFRIQQQLQQQATTDPLTGIANRRYALEQAALEIKRN 337 Query: 370 VQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCI 429 ++G+ + + +D+D K++NDT GH GD + +AQ + R+SD R GG+EF I Sbjct: 338 QRTGTPLSVVMMDIDHFKKVNDTYGHHVGDQVLMEVAQTCRSHCRESDLVSRFGGEEFLI 397 Query: 430 ILVDSTPQIAAQLPERIEKRLQHIAPQ-----KEIGFSSGIYAMKENDTLHDAYKASDER 484 +L + A E+I + ++ ++ + S G+ + + +D Sbjct: 398 LLPSTNLNGAQTHAEKIRQAIEDLSFPTAEGNVSVTASFGVSQWQGETKIDRVVSRADAA 457 Query: 485 LYVNKQNKNS 494 LY K + + Sbjct: 458 LYQAKHDGRN 467 >UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKN6_DESMR Length = 629 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 83/493 (16%), Positives = 169/493 (34%), Gaps = 20/493 (4%) Query: 14 ASVIVLTSSFLIFELVASDRAMSAYLRYIVQK--ADSSFLYDKYQNQSIAAHVMRALAAE 71 A + TS +L + LV R+ ++ + + + + Sbjct: 126 ADFLSYTSPYLSYPLVIISRSDGPFIGSVKDLNGLKVAEVKTLSTYSKVKNEFPEVTLDY 185 Query: 72 QSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFD 131 Q E E ++ L + ++ + + + + + Sbjct: 186 QFEQDTESMLEAVSLGKAQACIVDLAVASYLINKRGLSNLKVAAPTP-WGDNKLAMATPN 244 Query: 132 QAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNN--WSFLQSGSI 189 R + EE L Y P +V +A+ ++ L G I Sbjct: 245 SMPILKRILQKGLDSITPEEENLIRQKWLRLEYSSLTNPYHVLQWALKLTGFALLIFGII 304 Query: 190 GIDRKDIEKVFTGRTVLSSI-YQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNI 248 +++++ + + Q +++ + T +A +G++ D NK+ Sbjct: 305 FWKNRNLKREVEEKVAARELLKQANNYNRSLFEINTDPIMAIDREGVI-TDANKSTETIT 363 Query: 249 FYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYF 308 + + +F ++ D +Q + Y S + ++ F Sbjct: 364 GLSRTELIGRKFSSLFTNDQK------ADQGLQDTLLYSSIKNHELEFTNINGKNTHAIF 417 Query: 309 ITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQK 368 S +K + + + + +D++TGL NR+ + Sbjct: 418 NFSVFKDETGISTGIFAAARDITERKIMEERLKEMATTDSLTGLNNRQHFLEHSSILFEM 477 Query: 369 LVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFC 428 + +++ D+D KQ+NDT GH+ GDL + L++ R SD R+GG+EF Sbjct: 478 AKRHKANLSIALFDIDHFKQVNDTWGHEAGDLVLRELSKLALNCFRSSDIIGRIGGEEFA 537 Query: 429 IILVDSTPQIAAQLPERIEKRLQHIAPQ-----KEIGFSSGIYAMKE--NDTLHDAYKAS 481 +I+ ++ + A ER K ++ + I S GI N T++D K S Sbjct: 538 VIMPETDKEEAILASERFRKIVESTRFEYENDLLSITVSIGIAQFNPNTNTTINDLTKIS 597 Query: 482 DERLYVNKQNKNS 494 D+ LY K N + Sbjct: 598 DDALYTAKANGRN 610 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 10/264 (3%) Query: 240 INKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLP-GGIR 298 + + H PL T R ++ + S V LP GI Sbjct: 457 VPAAPEQPSSTPHSEPLRHAVTGGEWTRFGGRRSYVLRSVVEGT--PWSVVLTLPVAGIT 514 Query: 299 VSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFR--LYQN---VSRENISDAMTGLY 353 S + I+ + + ++ ++ + + V+ R L + ++R+ +D +TGL+ Sbjct: 515 ASRLLGIIITLQLALTALFYFFGRERGVRDRVQQLLRSELQERAAALARQATTDPLTGLH 574 Query: 354 NRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSI 413 NR L Q L ++ ++G + + D+D K++ND GH GD + L+Q + Sbjct: 575 NRLRFNEGLAQELARVRRTGQPLSLVMFDVDHFKEVNDRYGHPTGDQVLIRLSQTAAAQL 634 Query: 414 RKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKEN 471 R++D R GG+EF I+LVD+ A ++ E + + + + S G+ + + Sbjct: 635 RQTDLLARWGGEEFAILLVDADLHAAVEVAENLRRLVARTPFDQIGSVTASFGVAECRPD 694 Query: 472 DTLHDAYKASDERLYVNKQNKNSR 495 ++ + +D LY K N +R Sbjct: 695 ESADSLLERADAALYRAKSNGRNR 718 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 115/290 (39%), Gaps = 8/290 (2%) Query: 208 SIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTD 267 + Q+QR +++ I ++ L R LN D Sbjct: 502 HLEQEQRLLAATFESSQAIFITDVEGTIQRVNATFTQLTGYTEEEAVGANPRILNSGRQD 561 Query: 268 TDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILL 327 D +++ E +Q + G I L+ + ++ I + + Sbjct: 562 RDFYQEMFRTVRETGHWQGEIWNRRKNGEIF------PLHEVVTAIHDDQGEIEYYIAMF 615 Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 + + L + + D +T NR L+Q ++ + + +D+D K Sbjct: 616 HDITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLLLDIDHFK 675 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 +INDT GH+ GD + L A+K +R++D R GG+EF ++L + + + E++ Sbjct: 676 RINDTFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERGQHVAEQLR 735 Query: 448 KRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +++ A + S G+ + +++ D K +DE +YV K+ +R Sbjct: 736 EQVTATAFPCVGLVTISLGVAECRPGESIRDWVKRADEAMYVAKKGGRNR 785 >UniRef50_Q31E96 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E96_THICR Length = 775 Score = 267 bits (682), Expect = 8e-70, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 9/280 (3%) Query: 223 LTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDN 282 Y ++ I + L N+ + + P D II + Sbjct: 492 NGKAYGYVDNVAVIGHHIKNSGLANVKISGEMPFRADIAIAVRDDWPELHSIIQKVLQQ- 550 Query: 283 LFQYVSYVHDLPGGIRVSLSIDILYF-ITSSWKSVLFWILTALILLNMVRMHFRLYQN-- 339 +Y ++VS + +T +L + +R + Q Sbjct: 551 -IPPETYAEISNKWLQVSYQKQYNWQQMTIVLAPILLLLGVFAFFNRKLRQTQKKLQETN 609 Query: 340 --VSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 +S +++D +TG+YNR+ L L+ ++++ + GS+ I +D+D K++ND GH Sbjct: 610 KQLSILSVTDHLTGVYNRQYLDQRLDSEVERVNRYGSTFSVIMMDLDNFKKVNDKFGHLV 669 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK 457 GD + + AQ +++ IRK D R GG+EF +I ++ A QL +++ K ++ + Sbjct: 670 GDEVLVVFAQTVEKEIRKIDIFGRWGGEEFILICPETPLTHAIQLGKKVRKSIESQDYPE 729 Query: 458 EI--GFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 I S G+ + + ++D +D+ LY KQ ++ Sbjct: 730 NISQTVSLGVAEYQTGEAINDCLNRADQNLYKAKQLGRNQ 769 >UniRef50_B8EJQ5 Diguanylate cyclase n=1 Tax=Methylocella silvestris BL2 RepID=B8EJQ5_METSB Length = 738 Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 127/354 (35%), Gaps = 36/354 (10%) Query: 166 YFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTP 225 + +PV + + + S + ++K + ++ + P Sbjct: 379 FALDPVERRPYFYAIYPIRLANSEVVGHAVLKKSL------------NVLEADLRAFDQP 426 Query: 226 VYVAGQLKGIVLLDINKNNLRNIFYTH--DRPLLWRFLNVTLTDTDSGRDIIINQSEDNL 283 + G+++L L + DR + + T+ + I++ + NL Sbjct: 427 YFFVDP-DGLIVLTNQPALLLRQLWPPSSDRKSIPARQSPTVNIAPPSKREIVDATWINL 485 Query: 284 FQYVSYVH---DLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMV---------- 330 +V + L+I + + ++ +L L+ L + Sbjct: 486 GGERVFVRRRFANDSEWSLVLTIPMAELFANRVLGIVITLLATLMALIYLFGKERSVYDS 545 Query: 331 ------RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMD 384 L +++ + +D +TGL+NR L + + + + + D+D Sbjct: 546 VQMDKRLKLQELARSLEFQASTDPLTGLFNRMKFDQALAAEILRANRYNRPLSLVLFDID 605 Query: 385 KLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPE 444 K IND GHQ GD + L++ IR +D R GG+EF I++ +S Q+A Q E Sbjct: 606 HFKNINDLHGHQVGDNVLVQLSRIAAAHIRGTDVLARWGGEEFVILVPESNGQMAYQTAE 665 Query: 445 RIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + + + + S G+ + D +D +Y K +++ Sbjct: 666 NLRNAIGQAVFEKAGAVTCSFGVAEYVDGDAAESLISRADAAMYRAKIKGRNQA 719 >UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC96_DESAH Length = 1268 Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 106/261 (40%), Gaps = 5/261 (1%) Query: 240 INKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRV 299 I K L N+ L T + I+ + + V ++ +R Sbjct: 1003 IEKLGLSNLKVVGHLDRLKSIGMATQQKSVELNRIMRKLVDSLTREEVDGIYQKWVTLRF 1062 Query: 300 SLSID---ILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRK 356 + + ++ + + L R + + +++D +TGLYNR Sbjct: 1063 EHRFNYKNMWRYLFITALLFSGILFWNRKLSAFNRQMAEANAKLEQLSVTDRLTGLYNRM 1122 Query: 357 ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS 416 + L + + ++++ + I +D+D KQ+NDT GHQ GD + +A+ + ++IR + Sbjct: 1123 KIDDTLLEEIGRVLRYNYPLSLILMDIDLFKQVNDTHGHQAGDAVLIQMAKTMDKNIRST 1182 Query: 417 DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEI--GFSSGIYAMKENDTL 474 D R GG+EF +I + + A L E + + + I S G+ D+ Sbjct: 1183 DICGRWGGEEFMVICPHTDLKGALSLAEHLRESIARQIFPHVITQTGSFGVAQYGNGDSE 1242 Query: 475 HDAYKASDERLYVNKQNKNSR 495 D +D +Y+ K+ +R Sbjct: 1243 ADLIARADRAMYLAKEGGRNR 1263 >UniRef50_Q1K453 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K453_DESAC Length = 481 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 73/382 (19%), Positives = 139/382 (36%), Gaps = 20/382 (5%) Query: 135 EGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRK 194 E + S +YY D + V EP +V YF + + ++ D Sbjct: 94 EIKQRYGTVTSFFVSDHTYHYYYADGILKTVSADEPRDVWYFRVRDMQQDYEINVDPDMA 153 Query: 195 DIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPV-------YVAGQLKGIVLLD-INKNNLR 246 + + + YQDQ + L Y + I +D L Sbjct: 154 NHDSMTIFINYRVKDYQDQFIGATGVGLTVSAVKNLIENYQQNYQRTIFFVDPQGVLTLA 213 Query: 247 NIFYTHDRPLLWRFLNVTLTDT----DSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLS 302 + L ++ + ++ ++ + Y+ + + V S Sbjct: 214 GKEFPTSITSLADIEGLSAHRDQLLNEQQNTLVYQRNGETFHLNTRYISEFGWYLMVEQS 273 Query: 303 IDIL---YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILT 359 + + +T + + +T ++++ R + + ++D +T + NR+ + Sbjct: 274 EEPMLRQIRLTLLINVAICFTVTFIVIILTQMTINRYQKRLEEMALTDKLTRIANRQAID 333 Query: 360 PELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYA 419 L+Q ++ + I D+D KQINDT GH GD + +A + +R D Sbjct: 334 LHLQQLFKEQQRHQVPFSVILFDLDNFKQINDTHGHIAGDAVLQNIANIVTTELRDCDVV 393 Query: 420 IRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE-----IGFSSGIYAMKENDTL 474 R GG+EF ++L A + E I +Q A E S G+ ++ D Sbjct: 394 GRWGGEEFLVLLKHCQLDDALKRAESIRLAIQSYAIGFEEQTLYTTASFGVVEYRDQDDH 453 Query: 475 HDAYKASDERLYVNKQNKNSRS 496 + K +D+ LY+ KQN +R Sbjct: 454 NTLLKRADQALYIAKQNGKNRC 475 >UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRL2_PSYIN Length = 611 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 85/488 (17%), Positives = 172/488 (35%), Gaps = 56/488 (11%) Query: 38 YLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSE-----VSPEQRRAICEAFESANN 92 + + Q + H A + E + + Sbjct: 145 QRAFASENNVFEITTAVKAEQQLLIHFSYEQAGQAETQIRLWTVKEYSQYYANRYFIIGA 204 Query: 93 THGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEE 152 GL + Y ST L + D G G Sbjct: 205 MFGLGIILFFYNL----FIGYSTRLP-----QFLWYSGYIISALLAFLTDKGFGYRYLWS 255 Query: 153 KFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSI--Y 210 +++ D + + + F + + + V G ++ S+ Y Sbjct: 256 NSNWFSDFSPVFFIALVMIMATQFTRSFLNTATESVNIDRLLQLIFVVAGLSIFFSLIGY 315 Query: 211 QDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDS 270 +D ++S+LT ++ + G V+ L+ Y L W ++ Sbjct: 316 RDYAVILGLLSMLTSIFF--PVIGWVIY------LKGRSYARFYILGWSIWSL------- 360 Query: 271 GRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWIL--TALILLN 328 +I+ + V+ DL G+ S+ +L F + + L LI + Sbjct: 361 --GMILAVLQHIGMIPVTLYSDLSTGLCFSIEAALLSFALADRFNQLRNEKEEIELIHIE 418 Query: 329 MVRMHFRLYQNV---------------SRENISDAMTGLYNRKILTPELEQRLQKLVQSG 373 ++ +L + + +D +T + NR+ +++ ++ Sbjct: 419 HLKNDQQLLEQLVTERTEELEQAKDRAELLARTDPLTNMLNRRAFFECGSVEIKRSLRYK 478 Query: 374 SSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD 433 SS+ + ID+D K IND GH GD A+ +A +K IR D R+GG+EF +I+ Sbjct: 479 SSLAIMMIDLDHFKSINDNYGHAAGDNALLSVANTLKAMIRNVDIIGRIGGEEFAVIIPH 538 Query: 434 STPQIAAQLPERIEKRLQHIAP-----QKEIGFSSGIYAMK-ENDTLHDAYKASDERLYV 487 + +IA +L +R+ ++ + +I G+ ++ ++++L +A K +D+ LY+ Sbjct: 539 ADLEIATELAQRLRLGIEKVEIIIDNQPVKITACFGVTSIDIKSESLDEALKRADKALYL 598 Query: 488 NKQNKNSR 495 K+N +R Sbjct: 599 AKENGRNR 606 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 5/181 (2%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 I I + V + + D +TG++NR+ L L++ L++ + G+ + + Sbjct: 115 ISAIYITVQDVTDFVIYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIM 174 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 +D+D K+INDT GH GD + +++ + + +R SD R GG+EFC IL +++ + A Sbjct: 175 MLDIDHFKEINDTHGHICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQA 234 Query: 440 AQLPERIEKRLQHIAP-----QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 L ER ++ Q + S G+ + +DTL K +D+ LY K+ + Sbjct: 235 LVLAERCRTQVAASQFSCTDHQSRVTVSIGVTDLHRDDTLDSIIKRADDALYQAKRTGRN 294 Query: 495 R 495 R Sbjct: 295 R 295 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 13/265 (4%) Query: 237 LLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGG 296 LD+N+ R + YT L + + I + + H G Sbjct: 715 FLDVNEVACRRLGYTRRELLAMTPRELDAEEFAEQVGERIRRLREEGSLTFESAHRTRNG 774 Query: 297 IRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRK 356 + + I V L + + RL Q + RE +D +TG+ NR+ Sbjct: 775 TVLPVEIHAKLLDFDGKPVV-------LSIARDITDRKRLEQALMREATTDPLTGIRNRR 827 Query: 357 ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS 416 + E+ + + V+ G + + +D+D+ K++ND GH GD + QA +Q++R++ Sbjct: 828 QFFVDAEREMGRAVRYGRPLAVLMLDLDRFKRVNDRFGHHAGDAVLMGCVQACQQALRET 887 Query: 417 DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-----KEIGFSSGIYAMKEN 471 D RLGG+EF +L+++ A ER+ + ++ + S G+ Sbjct: 888 DILGRLGGEEFAAVLLETDLDDALAAAERLRRAVEEMDVPFSGQRLRCTVSIGLALRGPG 947 Query: 472 D-TLHDAYKASDERLYVNKQNKNSR 495 D L D + +D LY K+ +R Sbjct: 948 DGALDDILRRADSALYAAKEAGRNR 972 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 113/307 (36%), Gaps = 32/307 (10%) Query: 206 LSSIYQDQRTKQNVMSLLTPV------------YVAGQLKGIVLLDINKNNLRNIFYTHD 253 + I+ ++ V A ++ L D + F + Sbjct: 6 FTQIFDTVNIGLVILDREMRVCHWNRWMATRSGISADKIIDQSLFDFFPHLKTPTFNKNC 65 Query: 254 RPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSW 313 +L + R + + + + + + + Sbjct: 66 MAVLSFGNFAFFSQKLH-RYLFPFKPDSYFGCHFDLMQQSCTMGPLRDEDNA-------- 116 Query: 314 KSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSG 373 I + +++ V Q + N DA+TG+YNR+ L L++ + + Sbjct: 117 ------ITSLFLIVQDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYS 170 Query: 374 SSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD 433 + ID+D K++NDT GHQ GDL + +A IRKSD+ R GG+EFC +L + Sbjct: 171 RPFSLMMIDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPE 230 Query: 434 STPQIAAQLPERIEKRLQHIAP-----QKEIGFSSGIYAMKENDTLHDAYKASDERLYVN 488 + A + E + ++++ + S GI +D+ K +DE LY Sbjct: 231 TDCDAAETVAEHLRAHIENMEHLFQKKVIRVTISLGIACFAPDDSPETLVKRADEALYQA 290 Query: 489 KQNKNSR 495 K++ +R Sbjct: 291 KRSGRNR 297 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 6/179 (3%) Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 A+ + + + +D++TGL+NR+ E+ + + ++ + +D Sbjct: 869 AVATIRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMD 928 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K++NDT GH GD + LA+ + ++R+ D RLGG+EF ++L ++ A ++ Sbjct: 929 IDHFKRVNDTHGHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEV 988 Query: 443 PERIEKRLQHI-----APQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 +R+ + ++ A I S G + +T+ K +D LY KQ+ ++ Sbjct: 989 AQRLRRAIEKASMATDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNK 1047 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 76/423 (17%), Positives = 159/423 (37%), Gaps = 29/423 (6%) Query: 78 EQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGN 137 + I + +N A L T + ++ L +F + +E Sbjct: 288 DSLNEIYIFYPQTLKFIAVNRGA--RENLGYTGEELKEMTPVDLKPEFTLQSFKELLEPL 345 Query: 138 RHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIE 197 + + + + + F I R+ + Sbjct: 346 LKGEQKQLIFDAM------HRRKDGSLYPVEIHLELVEFDKEKVFVALVIDITERREMEK 399 Query: 198 KVFTGRTVLSSIYQDQRTKQNVMSLLTPVYV----AGQLKGIVLLDINKNNLRNIFYTHD 253 ++ +LS+I + ++ V A ++ G +I +L +F D Sbjct: 400 ELKERNEILSTIMEYAGDAIIMIDDNGKVTFWNPAAERILGYSKEEIIGKDLH-MFMIQD 458 Query: 254 RPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSW 313 L + +G+ ++ ++ + + H++ + +S I SW Sbjct: 459 MRLYEAYREAFKKFRLTGKGSVVGKTVE-MKTRHKNGHEIDVELSLSAVR-----IKDSW 512 Query: 314 KSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSG 373 ++ ++ + R + + R++I+D +T +YNR+ LEQ ++++ ++ Sbjct: 513 HAI--------GIIRDISERKRFEELLYRQSITDPLTNIYNRRFFMQMLEQEIERVKRNK 564 Query: 374 SSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD 433 I D+D K +ND GH GD+ + +A +K IRK+DY R GG+EF I+L + Sbjct: 565 KLFSLIMFDLDHFKNVNDRFGHAAGDMVLKSVADTVKGRIRKTDYFARWGGEEFIILLPE 624 Query: 434 STPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 ++ AA+L E + K++ ++ S G+ + DT+ D LY K + Sbjct: 625 TSLNNAAELAEELRKKISETELDGIGKVTASFGVTEYRNTDTVDTVLLRVDGALYEAKGS 684 Query: 492 KNS 494 + Sbjct: 685 GRN 687 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 126/332 (37%), Gaps = 14/332 (4%) Query: 176 FAMNNWSFLQSGSIG---IDRKDIEKVFTGRTVLSSIYQD----QRTKQNVMSLLTPVYV 228 F + ++ + G + T SI +D + +Q L T V Sbjct: 84 FEGSAINYRKDGRPYHVEWLISPVRDDSGRITAWLSIQRDVTHERELEQEARLLSTAV-- 141 Query: 229 AGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVS 288 I++ D + R + T + +L+ + Sbjct: 142 ESSAASILITDTEGCIVYVNRGFEQITGYRRDEVLGETPAVLNSGEQSARFYRDLWTTLE 201 Query: 289 YVHDLPGGIRVSLSIDILYFITSSWKSV---LFWILTALILLNMVRMHFRLYQNVSRENI 345 G L+++ S V ++ + + R+ + + R Sbjct: 202 RGETFRGTFLNRNRSGALFYLEQSITPVRADQGQVVRYVATGKDITERVRMEEELKRAAT 261 Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +DA+TGL NR LE+ ++ + G ++ + D+D K +ND GH+ GD + L Sbjct: 262 TDALTGLANRLSFEQLLERDYERCRRYGGALSLLMFDLDHFKAVNDAHGHEAGDAVLQAL 321 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK--EIGFSS 463 A + ++R +D R GG+EF ++L ++ A +L E++ +R+ + S Sbjct: 322 AGLVLANVRTADTVARWGGEEFMVLLPETPLAAAGELAEKLRERVAAHRFPHGAPVTASF 381 Query: 464 GIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 G+ A++++DT + +DE LY K R Sbjct: 382 GVCALRDDDTCRTLVRRADEALYRAKHLGRDR 413 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 14/254 (5%) Query: 249 FYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYF 308 FY RP L + + TD + + + + + G + + Sbjct: 173 FYGERRPQLMDLVFQSDTDLERRYAHVTREGDTLTAEGFCNALHDGHGAWILARV----- 227 Query: 309 ITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQK 368 + + ++ A+ ++ + RL +++ + D +T L+NR+ EQ Q+ Sbjct: 228 --APLRDAAGQVVGAMEIIRDITDSKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQR 285 Query: 369 LVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFC 428 ++ + ID+D K +ND GH GD + ++AQ + ++R+ D R GG+EF Sbjct: 286 FLRYHHPMALCMIDIDHFKSVNDRYGHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFV 345 Query: 429 IILVDSTPQIAAQLPERIE-----KRLQHIAPQKEIGFSSGIYAMKEN--DTLHDAYKAS 481 I+L ++ Q A ER+ +R++ + + S G+ A+ + TL A+ Sbjct: 346 ILLPETDLQTACASTERLRVAVAERRIETPSGPVSVTLSLGVVAIADGPAMTLERLLDAA 405 Query: 482 DERLYVNKQNKNSR 495 D+ LY KQ +R Sbjct: 406 DQMLYRAKQAGRNR 419 >UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AX52_RUBXD Length = 378 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 121/271 (44%), Gaps = 5/271 (1%) Query: 229 AGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVS 288 A ++ ++++ +L Y L + T T + + + L + Sbjct: 106 AFRIFAGTGWNMDQASLTETTYPMLAILCIIAQLIFDTQTALRLSLGLFGTATALVGAGA 165 Query: 289 YVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFR-LYQNVSRENISD 347 V + G R++L S++ + + ++ A + R L + + R +D Sbjct: 166 LVEE--SGHRITLDQTAWIAQQSAFLAAVIALVYATSYVKSQLARQRTLAEAMHRLAHTD 223 Query: 348 AMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQ 407 +TG+ NR+ L L + ++ + G + I D+D+ K +NDT GH +GD A+ +A Sbjct: 224 PLTGISNRRSLYAALRREMEAARRYGKPLSVILFDLDRFKLLNDTYGHNQGDAALRRVAH 283 Query: 408 AIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIAPQKEIGFSSGI 465 + ++R SD+ R GG+EF ++ ++ A L ER+ + + + + S G+ Sbjct: 284 TARAALRASDHLGRWGGEEFIVLAPETDLDQARHLAERLREAIALDRPPGRPPLTASFGV 343 Query: 466 YAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + + +D+ D + +DE LY K +R+ Sbjct: 344 ASCRPDDSPEDLLRRADEGLYRAKAGGRNRA 374 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 2/176 (1%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 T + + R+ + + + D +T LYNR+ L L L + + G + + + Sbjct: 311 TISVEFADITERTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLL 370 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K+INDT GH GDL +T +A+ I +R +D R GG+EF I ++ AA Sbjct: 371 DIDHFKRINDTFGHDSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAV 430 Query: 442 LPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 L E+I + + + S GI ++ D ++ K +D LY K+ +R Sbjct: 431 LAEKIRSSIAMFSFPTVGAVTISVGISLLESKDDINALIKRADTALYAAKEMGRNR 486 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 7/184 (3%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 I + + + R +++ +D +TGLYNR+ L+ +++ + S+ I Sbjct: 392 ITSIVGSAQDITERKRAEEHLRYLATTDELTGLYNRRHFMEILDTEIERAKRYEQSLALI 451 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 ++D+D K INDT GH GD A+ LA + R+ D RLGG+EF +I + A Sbjct: 452 SLDIDHFKTINDTHGHAVGDAALEHLAAQLLACKRQPDSLGRLGGEEFALIAPHTDRAGA 511 Query: 440 AQLPERIEKRLQHIAPQ-----KEIGFSSGIYAM--KENDTLHDAYKASDERLYVNKQNK 492 +L ERI L+ + S G+ A+ ++NDT+ K +D+ LY K+ Sbjct: 512 TELAERIRSELERTPIELESTSLHPTISLGVTALNIQDNDTIDALLKRADDALYEAKRTG 571 Query: 493 NSRS 496 +R+ Sbjct: 572 RNRT 575 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 136/329 (41%), Gaps = 16/329 (4%) Query: 175 YFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKG 234 + + + D K+I R + + R K N + L V G Sbjct: 448 NIYGSICICSKVKNYFEDYKEILSNLKDRIENALKTIELRKKLNYQNDLVNSIVKNTQVG 507 Query: 235 IVLLDI------NKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVS 288 +++ D N L + YTH+ ++ + + Q Sbjct: 508 VLVFDEDNIYYENDYLLELLGYTHEDIKTLSIFDILSPIHVKDIIKALTNKTPIILQEFH 567 Query: 289 YVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDA 348 ++ + V S++ + + + A+ + L + +++ D Sbjct: 568 ILNKKNQTLYVKGSLNFIKDVENK--------PVAVFTFVDITKEKELSDMLLKQSTEDP 619 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TG+YNR+ L +LE+ ++ + + I D+D K IND+ GH GD + +A+ Sbjct: 620 LTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKHINDSFGHDVGDKVLKAIAKV 679 Query: 409 IKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIY 466 + ++IR +D R GG+EF II ++T + A L E++ ++++ + + S G+ Sbjct: 680 VSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRNLHFEEGINVTCSFGVA 739 Query: 467 AMKENDTLHDAYKASDERLYVNKQNKNSR 495 +++++DT K +DE LY K+ ++ Sbjct: 740 SLEKHDTKETLLKRADEALYEAKKTGRNK 768 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 264 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 115/293 (39%), Gaps = 20/293 (6%) Query: 213 QRTKQNVMSLLTPVY----VAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDT 268 Q T V L +Y Q G + +I + LR++ T + Sbjct: 203 QGTHLMVTDLEGRIYLHAPNQEQHVGRTVPEIKNSALRDMQSTPFTSV----------SA 252 Query: 269 DSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLN 328 R+++ + + + +++ + + + +S VL + +L+ Sbjct: 253 ADHRELVAGDTRISRYPLLAFASFPREMVLEPWKNHAMVYGGASIVLVLVVAGLSTLLVR 312 Query: 329 MVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQ 388 R + ++ +D +TG NR+ + ++ + G + I ID+D K Sbjct: 313 GQIRLNRQSRELALAASTDMLTGALNRRAFMESASREFARVCRYGGHLSCIMIDLDHFKN 372 Query: 389 INDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 +NDT GH GDL ++ A I +R+ D R GG+EF I+L + AA + E + Sbjct: 373 VNDTYGHAAGDLVLSSSAHYIASRLREPDMFCRYGGEEFVILLPGTDRNGAATVAEELRA 432 Query: 449 RLQHIAPQ-----KEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 L + Q + S G+ + TL +D+ LY K+N +R Sbjct: 433 GLAGLDLQRGDEKLPLTASFGVAEIHAQCATLDTLLSLADQALYEAKENGRNR 485 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 72/414 (17%), Positives = 157/414 (37%), Gaps = 24/414 (5%) Query: 101 HKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVE---------GNRHQDDYGSGLGMAE 151 G L + D IV+ L ++ + N+ D + Sbjct: 338 PFLMEKDGNLVGIAKDFFDIVKENLFLKTENKILSSYSDVVNYIENKKADITFIATKTPK 397 Query: 152 EKFHYYLDLNDRY--VYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSI 209 ++ + + + ++ + N+ + +IG D + + + L + Sbjct: 398 KENYAIFSIPFSTYPIVIATKKDISFVPDLNFLRNKKIAIGKDYSAYD-LLKNFSKLKIV 456 Query: 210 YQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTD 269 + + +M V V + ++ I+ NL N+ + P + + D Sbjct: 457 GVEDTKQALLMLEKNKVDVVIDIMPVLAYYISVLNLDNVKISGTTPFKYNASFMIRDDYS 516 Query: 270 SGRDIIINQ-------SEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILT 322 +++I ++ + V+ G + + +F + ++ Sbjct: 517 ILKNMIDRVLEDIPHIKKEKILSNYINVNYQQGYTEKYIKVTYFWFGIVIIILLGIILII 576 Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 L +L + + D +T +YNR L++ ++ + + + I +D Sbjct: 577 IYQL----SKIKKLSKQLETMAFYDKLTNIYNRAKFKNILKEFIEYSKRYKTPLSLIFLD 632 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K+IND GH++GDL + + + K S+R+SD R GG+EF I+L ++ A + Sbjct: 633 IDYFKKINDNFGHEKGDLVLKEMVKVAKLSLRESDVFGRWGGEEFLILLPNTDINGAKIV 692 Query: 443 PERIEKRLQHIAPQ-KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 E+I ++ ++ S G+ +KE+DT+ +D LY K+ +R Sbjct: 693 AEKIRDAIESHDFDGIKVTVSLGVTQLKEDDTIESFVNRADIALYQAKKEGRNR 746 >UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=2 Tax=Desulfovibrio RepID=B8DIR5_DESVM Length = 474 Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 5/260 (1%) Query: 238 LDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGI 297 I + L N+ P L + + D ++N+ +L + + Sbjct: 214 YTIRQQGLFNLKIAGKLPEYENKLRMGVVRHDPLLRTVLNRGIRSL-TLEERQQIVNRHV 272 Query: 298 RVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKI 357 ++ Y++ + F+ L ++L R R+ + R +D +T L NR Sbjct: 273 PITAQTSADYWLVARVAG--FFALLVGVVLWYNRRLKRMNAVLERLARTDPLTDLPNRSR 330 Query: 358 LTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSD 417 L + +++ + + +D+D K++ND LGH GD + + A ++ S+R +D Sbjct: 331 LNELFRREVERAQRYRRPFSIVILDIDHFKRVNDELGHLAGDRTLQVFAGVVRDSVRGTD 390 Query: 418 YAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-KEI-GFSSGIYAMKENDTLH 475 R GG+EF ++ ++T + A QL ER+ L+ + I S+G+ A +E D++ Sbjct: 391 TVGRWGGEEFLVLCPETTAEEAVQLAERLRGSLRATQFEGGRIHTLSAGVAAFREGDSVD 450 Query: 476 DAYKASDERLYVNKQNKNSR 495 +D LY K R Sbjct: 451 TLLHRADTALYRAKNGGRDR 470 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 7/202 (3%) Query: 301 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP 360 L + + I S + L + + +R + V + + +D +T + NR+ L Sbjct: 179 LHHNATWLILLLGLSTPYIGLLVAMNSSAIRRWRQRESEVRQLSTTDPLTQVANRRHLLE 238 Query: 361 ELEQRLQKLVQSGSS-VMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYA 419 L + + +SG S + + +D+D K IND GH GD A+ + A+ +++ R +D Sbjct: 239 RLNLEISRCERSGHSELSLLMMDLDHFKSINDEHGHLFGDEALRVTARVLREQSRNTDLV 298 Query: 420 IRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ------KEIGFSSGIYAMKENDT 473 R GG+EFC++L D+ PQ A Q+ ER + L+ I S G+ + DT Sbjct: 299 GRYGGEEFCLLLPDTGPQGALQIAERCRQALEQADIDREDGEVLHITTSIGLATYQMGDT 358 Query: 474 LHDAYKASDERLYVNKQNKNSR 495 +DE LY K+ +R Sbjct: 359 NESLLHRADEALYQAKEQGRNR 380 >UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N773_9GAMM Length = 462 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 130/351 (37%), Gaps = 17/351 (4%) Query: 163 RYVYFYEPVNVEYFA----MNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRT--- 215 Y+ F +P FA +N + + + + + G ++ + Y D Sbjct: 109 SYLAFTKPFIFYPFAVATQPDNTFIINLRQVTDKHFVMVEGYAGVDIVQNAYPDISLATV 168 Query: 216 ----KQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSG 271 + V+ + K+ + +I + +D Sbjct: 169 NSAAEGLKQVETGLVFGYIDTVPSINYQTLKHGISHIKINGILDQRYAMSVGIRSDLPLL 228 Query: 272 RDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYF---ITSSWKSVLFWILTALILLN 328 I + + + + ++D+ + + V + L++ Sbjct: 229 LSIYNKAIAVTTEETRQQILNNWLSLSFHQNVDLTWLWRMLIVIAVVVALFFYRYLLVNQ 288 Query: 329 MVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQ 388 R R+ + + + + D +TG++NR L +Q L + + + +D+D KQ Sbjct: 289 HNRELQRVNKKLEQLSQRDHLTGIHNRYYLDQAFQQELTRYKRYQHGFTIVMLDIDLFKQ 348 Query: 389 INDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 IND+ GH GD I +A +++ +R D R GG+EF I+ +++ A L E + + Sbjct: 349 INDSYGHVVGDDVIKQIAMLLREHVRDQDVVARWGGEEFLILNPETSLDGARTLAEHLRR 408 Query: 449 RLQHIAP---QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 ++ + ++ S G+ + + + + +D LY KQ+ ++ Sbjct: 409 LIRRTPFTVDKIDVTVSFGVTDYRAGEDIETMIQRADSALYQAKQSGRDKT 459 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 11/274 (4%) Query: 229 AGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVT-LTDTDSGRDIIINQSEDNLFQYV 287 Q ++ L + D L+ + + ++ + R I ++ +L + Sbjct: 22 EDQDYSVIEATNGPQALDLLQSHDDIDLVLLDVEMPKMSGLEVLRKIKQDEQIKDLPVIL 81 Query: 288 SYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISD 347 + + L + + ++ + + L + + + +D Sbjct: 82 VTANGDDQNVVDGLDLGAVDYVIKPYS-----LSVLLARVRSALREKERLDLMEKWATTD 136 Query: 348 AMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQ 407 +TGLYNR+ + ++ L+++ ++ + FI +D+D K++ND GH GD + LA+ Sbjct: 137 PLTGLYNRRFFFEQAQRELERVQRNETDASFIILDIDHFKKVNDEYGHLVGDDVLEGLAK 196 Query: 408 AIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP-----QKEIGFS 462 K++ RK D R GG+EF I L D+ + A + ER K+++ ++ + S Sbjct: 197 LFKETFRKVDLCCRFGGEEFVICLPDTDTEGALLVAERTRKKVEELSFNTEKGPLHVTIS 256 Query: 463 SGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 G+ + EN TL D K +D+ LY KQN +R+ Sbjct: 257 LGVSSANENTTLEDMLKRADDALYQAKQNGRNRT 290 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 6/180 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 + ++ + R+ + R +D +TG++NR+ + + + G ++ + + Sbjct: 395 GVIGVMLDITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALML 454 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K+INDT GH GD+AI LA Q IR D R+GG+EF I+L ++ A Sbjct: 455 DIDHFKRINDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALL 514 Query: 442 LPERIEKRLQHIAPQKEI-----GFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + ER+ + + I E+ S G+ E D T+ +D LY K++ ++ Sbjct: 515 VAERLRQAVAAIRIPAELGTVAFTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRNK 574 >UniRef50_B9L5Q2 Diguanylate cyclase n=2 Tax=Nautilia profundicola AmH RepID=B9L5Q2_NAUPA Length = 463 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 142/315 (45%), Gaps = 21/315 (6%) Query: 198 KVFTGRTVLSSIYQDQR--------TKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIF 249 K +T +L Y + T +++S Y A + +++ +INK N+ Sbjct: 146 KNYTAAKLLKERYPNYNILEVKNIQTALDMVS-SGKAYAAIDIMPVLIYNINKYEFANLK 204 Query: 250 YTHDRPLLWRFLNVTLTDT-------DSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLS 302 + PL ++ + D + D I ++ ++ YV G S+ Sbjct: 205 ISGKTPLEFKMQFMIRNDYTPLASAINKAIDTITPYDKEKIYGKWIYVKYQTG---FSVE 261 Query: 303 IDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPEL 362 + + I + ++ + L ++ +L + + + + D++T +YNR + L Sbjct: 262 QVLTWAIIIGILITILFVYWIIRLKKEIKKRHKLEEELKKISFYDSLTDIYNRYKIDLSL 321 Query: 363 EQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRL 422 + +++ + + I D+D K+INDT GH+ GD + L++ IK++IR++D R Sbjct: 322 KSQIELAKKYKIPLSIIFFDIDDFKKINDTYGHKVGDEVLIELSKLIKRNIRQTDIFGRW 381 Query: 423 GGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK--EIGFSSGIYAMKENDTLHDAYKA 480 GG+EF IIL ++ A + +++K ++ + + S G+ +K+ND+L+ Sbjct: 382 GGEEFIIILPNTDLTTATHIANKLKKAIEEHSFPIIKHLTCSFGVTELKDNDSLNTLTVR 441 Query: 481 SDERLYVNKQNKNSR 495 +D LY K +R Sbjct: 442 ADSFLYEAKNKGKNR 456 >UniRef50_Q0AAU2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU2_ALHEH Length = 686 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 2/173 (1%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + + R Q + D +TGLYNR+ LE+ L+ ++G V + D+D Sbjct: 508 VAEDITERKRREQALRYRASHDGLTGLYNRRHTQRALERELRLAARTGHPVSVVLFDLDH 567 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K++NDT GH GD + LA + + +R +D R GG+EF ++L + A QL E Sbjct: 568 FKRVNDTHGHNAGDQVLRQLAGLVTERVRDTDIVGRWGGEEFLLVLPGTDETGAGQLAEV 627 Query: 446 IEKRLQHIAPQK--EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + + + S G ++ +K D+ LY K N +R+ Sbjct: 628 LRAYVAEARFPIPDPVTISLGYAQAGADEGADALFKRVDQALYAAKANGRNRA 680 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 + + ++ RL + +++I D +TGLYNR+ L + L ++ + + + ID+D Sbjct: 366 VALSLVNLRLRATLRQQSIRDPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHF 425 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 KQ NDT GH GD + LA +++ R D R GG+EF ++L + A E + Sbjct: 426 KQHNDTYGHALGDTLLRRLATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEAL 485 Query: 447 EKRLQHIAPQKE------IGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 + ++++A + S G + ++ T D +D LY K +R Sbjct: 486 RRSVENLAVTSNDAEFVALTISIGGASWPDHATTPEDLLARADAALYRAKHRGRNR 541 >UniRef50_C0QM24 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM24_DESAH Length = 488 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 149/445 (33%), Gaps = 39/445 (8%) Query: 85 EAFESANNTHGLNLTA-HKYPGLRGTLQTASTDCDTIVEAAALLP------AFDQAVEGN 137 + G N+ + + L+ T + DT + + E Sbjct: 38 HITHTELPLTGDNVYSEIQRDLLKPTFIASLMAADTFLRDWVIQGERNPQKIARYLEEIK 97 Query: 138 RHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIE 197 + + S K +YY + V E + YF + + ++ D + + Sbjct: 98 VKYNTFSSFFVSDNTKQYYYSKGILKTVERQEFRDQWYFRIKDLDTDYEINLDPDMANQD 157 Query: 198 KVFTGRTVLSSIYQDQRTKQNVMSL----------------LTPVYVAGQLKGIVLLDIN 241 + Y + L ++ + I L N Sbjct: 158 TMTIFINHKVYDYDGNYIGATGVGLAIHAVKKMVNTYQERYNRTIFFTDKEGNITLHGQN 217 Query: 242 -----KNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGG 296 KN R + ++ ++I +N F + +V Sbjct: 218 FSKPVKNIFEVKEIAEHRQEIHAGSPLSFQYKKDNKNIYVNNRYIPEFGWYLFVEQCGDK 277 Query: 297 IRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRK 356 + ++ + S+ + ++ + + + +++ +D +TG+YNR+ Sbjct: 278 AIAKVRNTLVLNLVFSFGIIGLILIVTNLTIASF------QKRLTKMASTDKLTGVYNRR 331 Query: 357 ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS 416 ++Q L+++ + + + I D+D K++NDT GH GD I ++IR S Sbjct: 332 AFDIIIDQTLKEIQRKQTPLSIILFDLDHFKRVNDTYGHLAGDYIIQTTVGTAARTIRNS 391 Query: 417 DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-----PQKEIGFSSGIYAMKEN 471 D R GG+EF I+L A + E+I + Q + S G+ Sbjct: 392 DILCRWGGEEFLILLKGCDLGDAMKTAEKIRTAVASQPARYGDDQICVTISVGVTEHTGQ 451 Query: 472 DTLHDAYKASDERLYVNKQNKNSRS 496 DT K +D+ LY+ K + +R Sbjct: 452 DTKETLLKRADKALYLAKASGKNRC 476 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 105/229 (45%), Gaps = 4/229 (1%) Query: 268 TDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILL 327 R+ Q + + D+ G + I I + L +A + Sbjct: 455 KGEVREYKGRQVLSPRHSFEQWQQDVDGYAPIWTEIQIE--AAKTLAEDLAIGASAYQIE 512 Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 + + Q + +DA+T ++NR + LE+ +++ + G + I +D+D K Sbjct: 513 QLNQELTEANQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRHGRDLAVILLDIDHFK 572 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 ++ND GH GD + L+++AI Q +R SD R GG+EF II ++ + A QL ER+ Sbjct: 573 RVNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEEFLIIAPETDLESANQLAERLR 632 Query: 448 KRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 +RL ++ ++ S G+ + ++ + K +D LY K++ + Sbjct: 633 RRLSNLQFDKVGQVTASFGVAELLPSEDRNSLVKRADNALYQVKESGRN 681 >UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LR80_ACIC1 Length = 710 Score = 261 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 7/235 (2%) Query: 267 DTDSGRDIIINQSEDNLFQ-YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALI 325 D R I + + + G + V + + ++ + + T Sbjct: 431 DGPGLRPIPEEPRRRTVLAVPLRQAGRISGVLAVYDQEETGDGGAAFTENDVRTLGTFAG 490 Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 ++ + L+Q R +++DA+TGL+N + LT L +++ + + + ID+D+ Sbjct: 491 QASVAIENVLLHQEAERLSLTDALTGLWNYRYLTMTLGHEIERATRFRRPLALLMIDLDR 550 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K IND GHQ GD + LA+ + ++R+ D R GG+EF +IL ++ AA ER Sbjct: 551 FKDINDRHGHQAGDAVLVELARRLHTTVREVDTVARYGGEEFVVILPETDADGAAHTAER 610 Query: 446 IEKRLQHIAP-----QKEIGFSSGIYAMKENDTLHD-AYKASDERLYVNKQNKNS 494 + + ++ + S GI + + +A+DE LYV K + Sbjct: 611 LRQAVRGTPFHVEQMDIPVTASIGIAVFPRHGSSAAILLRAADEALYVAKHSGRD 665 >UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W5X6_MAGSA Length = 317 Score = 261 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 2/159 (1%) Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 + + +I+DA+TGL+NR+ L L + + V I D+D K +ND GH G Sbjct: 156 ELEKASITDALTGLFNRRRLDESFAHELDRAQRYAEPVSLIISDVDHFKSVNDIHGHHVG 215 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE 458 D + +A ++ +R D R GG+EF II ++ A L E++ + Sbjct: 216 DEVLQAMAGLLRHGVRALDVVGRWGGEEFLIICPNTDLDGATALAEKLRAAIASAQFPGI 275 Query: 459 IG--FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S G+ ++ ++ D +D LY K N +R Sbjct: 276 GTSSASFGVAQYQDGESFKDTVARADTALYRAKVNGRNR 314 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 261 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 9/187 (4%) Query: 319 WILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 ++ ++ + + + + ++D +TGLYNR+ L++ Q+ + G + Sbjct: 155 FLERFAAIVTLCLENVLNRERLKWLGLTDPLTGLYNRRYFEQRLQEEAQRTRRHGDPLAC 214 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 + +D D K+INDT GHQ GD+ + +LA+ ++Q +R D A R+GG+EF ++L + + Sbjct: 215 LMLDADHFKRINDTWGHQAGDVVLKVLARRVRQQLRGCDVAARIGGEEFAVLLPSTPVRH 274 Query: 439 AAQLPERIEKRLQHIAPQ------KEIGFSSGIYAMKEND---TLHDAYKASDERLYVNK 489 + ERI + ++ S G + + +D LY K Sbjct: 275 VQLVAERIRLAIAGEPVHVSPDCVLQVSVSLGAAMLAPGAADISPERLMARADAALYQAK 334 Query: 490 QNKNSRS 496 +N +R+ Sbjct: 335 RNGRNRT 341 >UniRef50_Q0A8W9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8W9_ALHEH Length = 302 Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 2/199 (1%) Query: 299 VSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKIL 358 + S +++ + + ++ + + L + + D +TGL NR Sbjct: 100 LHRSGEVIPVEIALVPVDVAGTRMVMVSAIDLSVRKALEAQLHHQANHDPLTGLVNRYHF 159 Query: 359 TPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDY 418 L + +++ + G I +D+D K +NDT GH EGD + A+ + IR +D Sbjct: 160 EELLAREIERGQRYGGGFALIMLDIDHFKAVNDTYGHLEGDKVLRRFAEELTGKIRAADT 219 Query: 419 AIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIAPQKEIGFSSGIYAMKENDTLHD 476 R GG+EF ++L + A L E I + + ++ S G+ + +++ Sbjct: 220 LARWGGEEFMLLLPGTDIAGARALAEAIRVAVNGCRMPVPGQVTVSLGVTGYRNGESVWG 279 Query: 477 AYKASDERLYVNKQNKNSR 495 K DE LY K + Sbjct: 280 LLKRVDEALYAAKLAGRDQ 298 >UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRM0_AZOC5 Length = 514 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 9/213 (4%) Query: 288 SYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISD 347 + D+ R + + +T + S+ AL+L + + RL + + +++D Sbjct: 278 QSIRDIFLPWRYRVLVGTAAVLTVGFASIAI----ALVLRHDLMRRSRLQAELLQLSLTD 333 Query: 348 AMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQ 407 +TG+ NR+ + Q+ + GS V + ID+D+ K +ND LGH GD + +AQ Sbjct: 334 DLTGIANRRRFFDVAIREWQRAQRLGSPVAVLMIDIDRFKLLNDRLGHAAGDAVLQAIAQ 393 Query: 408 AIKQSIRK-SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--IAPQKEIGFSSG 464 I+ S+R+ +D A R GG+EF IL D+ A Q ERI +++ I + S G Sbjct: 394 LIRHSLRRPADLAARYGGEEFTAILPDTDMAGAFQTAERIRTQVERDVIRGDHPVTVSIG 453 Query: 465 IYA--MKENDTLHDAYKASDERLYVNKQNKNSR 495 I A N+T + A+D LY K++ +R Sbjct: 454 IAAAIASPNETFENVVAAADRALYRAKESGRNR 486 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 8/183 (4%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 + + ++ + + + +D +TG NR+ EQ L++ + G++V + Sbjct: 292 MGTIGIVTDITERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLM 351 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 ID+D KQ+ND GH GD A+ AI+ ++R+ D RLGG+EF +L ++T A Sbjct: 352 IDIDHFKQVNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGAL 411 Query: 441 QLPERIEKRLQHIA-------PQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNK 492 + ER+ + ++ IA P + S G+ + + + +D LY K Sbjct: 412 LVAERLRQAVEAIALPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKAEG 471 Query: 493 NSR 495 +R Sbjct: 472 RNR 474 >UniRef50_B9ZM04 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM04_9GAMM Length = 291 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 19/226 (8%) Query: 289 YVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDA 348 Y+ +P + SI L F L+ + V R + E+I+D Sbjct: 54 YLGFIPLNWGLYHSIPDLLVPIIFLLGGSFVCSVVLLTYSSV-ESIRRITRLEHESITDP 112 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TGL+NR+ + L++ + + + G + + +D+D+ K IND LGH GD + +AQ Sbjct: 113 LTGLFNRRHMDRRLDEEVARSRRYGQPLSVVMLDIDEFKGINDRLGHLAGDYILESIAQR 172 Query: 409 IKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE---------- 458 ++Q++R+ D A R GG+EF +I + A QL E++ + + Sbjct: 173 LRQNLRRVDLAARFGGEEFVVIAPHTDQDAALQLAEKLRSEIAQTPIILKGHEHVPPCAP 232 Query: 459 ----IGFSSGIYAM----KENDTLHDAYKASDERLYVNKQNKNSRS 496 + S G+ ++ D + +D+ LY K +R Sbjct: 233 DELYVTVSVGVASLNIEPDSRDNADFLLQRADDALYRAKAGGRNRC 278 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 82/467 (17%), Positives = 172/467 (36%), Gaps = 24/467 (5%) Query: 34 AMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNT 93 + YL + + S + KY Q + + ++ ++ + + + Sbjct: 36 RIDLYLSQKIDQLRSEYRVTKYSYQHLVSFFYDMFYDDRELLTLITQTSNKKRVYQKLFP 95 Query: 94 HGLNLTAHKYPGLRGTLQTASTDCDTIVEA--AALLPAFDQAVEGNRHQDDYGSGLGMAE 151 + L + L T++ L + + N ++ + L + Sbjct: 96 YYQKLKKYHIHYLS-----LYKPDGTLILNMNKPELATSSKKLSLNNKKNM-ANKLLITF 149 Query: 152 EKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQ 211 +K YY + ++ ++ F + I K + + R Sbjct: 150 QKPIYYNNHLIAFIELALSYDI--FTKELQKLFHAHYEFIVNKLMVEGIAFR-------- 199 Query: 212 DQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSG 271 + S +P + + I + ++ I + + L + Sbjct: 200 -YGIYSFIQSEYSP-FFYYEKISDKSDGIYRKTIQKIKLKIRNTISNQLLQY--KNFAKS 255 Query: 272 RDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVR 331 +I N ++ + + +I F T W+++L + L L ++ Sbjct: 256 VEIDGNYYVITFLAINKNKFNVGYIVSIKRDNNIKMFDTIFWQNILLGSILILFLFTILF 315 Query: 332 MHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIND 391 D +TGL+NR E +++ + + I D+D K+IND Sbjct: 316 YFAISRIKFEEMATVDKLTGLFNRHKFQEIAEIEIKRSHRHKRPLSVILFDIDHFKKIND 375 Query: 392 TLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ 451 T GH GD+ + LA+ IKQ+IRK DYAIR GG+EF I+ ++ + A + E++ K ++ Sbjct: 376 TYGHDIGDVVLRELAKIIKQNIRKYDYAIRWGGEEFLILTPETDEKQAFAMAEKLRKAVE 435 Query: 452 HIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 ++ S G+ ++ N+++ A K +D LY +K +++ Sbjct: 436 SHTFPEVGKVTISLGVASVDPNESIDQAIKKADNALYGSKLGGRNKT 482 >UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLF8_MEIRU Length = 373 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 1/181 (0%) Query: 316 VLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSS 375 F + L LL M R Y + + +DA+T L NR+ + +LE L + + Sbjct: 172 FTFSNIAYLALLYMFAYLRRHYAQMHQMAHTDALTNLTNRRAMQQKLEGELDRARRYNRP 231 Query: 376 VMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDST 435 + D+D KQINDT GH GD + +A + Q +R+SD R GG+EF I+ ++ Sbjct: 232 FALLLADLDHFKQINDTYGHSVGDQVLREVAGRLAQHLRESDSLARWGGEEFLILAPETD 291 Query: 436 PQIAAQLPERIEKRLQHIAPQK-EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 Q A L +R+ ++ ++ S G+ ++ D++ +DE +Y K + Sbjct: 292 LQQAYLLAQRLLGAIRESPISGVQVTLSLGVACYRQGDSIAALLSRADEAMYRAKAGGRN 351 Query: 495 R 495 + Sbjct: 352 Q 352 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 +++ + +L + + ++I D +TGL+NR+ L Q + + + S+ I D+D Sbjct: 784 VSLAIANIKLRERLENQSIRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGDIDHF 843 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 KQ ND LGH GD + + + ++ +IR SD A R GG+E I+L ++ + E + Sbjct: 844 KQFNDQLGHDAGDHVLKTIGRILQSNIRGSDIACRYGGEEMTIVLPQTSLEDTLVKAESL 903 Query: 447 EKRLQHIAPQ------KEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNSR 495 + + + + + S G+ +T+ + +A+D LY K +R Sbjct: 904 RQAIASMEVEYKGKELGTLTVSLGVACYPNHGETMVNIIQAADRALYQAKAAGRNR 959 >UniRef50_Q47GW9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GW9_DECAR Length = 469 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 68/381 (17%), Positives = 134/381 (35%), Gaps = 38/381 (9%) Query: 152 EKFHYYLDLNDRYVYFYEPVNVEYF-----AMNNWSFLQSGSIGIDRKDIEKVFTGRTVL 206 E YY + R + E F W F + +I ++ + Sbjct: 80 EVDQYYDGKSRRSALIPDAFEAEDFFPAFGHGGRWLFFTAAAIRNADGEVIGAIETLQDV 139 Query: 207 SSIY--------QDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLW 258 + + Q V + V + + L Sbjct: 140 TERRLAEAALRENEAYLAQIVDGSSVAMLVIDAQHRVTHWNRACEMLTGTLAKDVIGTGN 199 Query: 259 RFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSL------------SIDIL 306 ++ + + D+II+ + +N + + P + + S L Sbjct: 200 QWQSFYASKRPIMADLIIDDARENAVDRLYHGRFRPSPLILGGYEAEDFFPHFGESGRWL 259 Query: 307 YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSR-------ENISDAMTGLYNRKILT 359 +F + ++ ++ A+ L V R + + + +D++TGL+N + L Sbjct: 260 FFTAAPLRNGAGQVIGAIETLQDVTERRRAEEALRESEERYRSLSQTDSLTGLFNSRHLH 319 Query: 360 PELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYA 419 +L L++ + G + + +D D K +ND GH GD + LA AI +R+SD+A Sbjct: 320 EQLPNELERAGRYGRPLSLLVLDCDNFKCVNDRYGHLGGDKVLQSLATAIGHCLRRSDFA 379 Query: 420 IRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE------IGFSSGIYAMKENDT 473 R GG+EF ++L ++ Q A + ER+ + I S G+ ++ Sbjct: 380 FRYGGEEFVVLLPETAIQAALAIAERLRSQFASIETPAPSGDAICCTVSIGVAECVPGES 439 Query: 474 LHDAYKASDERLYVNKQNKNS 494 + +DE Y+ K + Sbjct: 440 EASLVRRADEACYMAKARGKN 460 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 7/184 (3%) Query: 319 WILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 LT L + + +L + +S+++I DA+TGL+NR+ + LE+ + + + + Sbjct: 1152 LALTVAEHLALSLANLKLRETLSQQSIRDALTGLFNRRYMEESLEREIHRAQRHQRPMGI 1211 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 I +D+D K NDT GH+ GD + L +++SIR SD A R GG+E +IL D++ Sbjct: 1212 IMLDIDHFKHFNDTFGHEAGDAVLRELGIFLQRSIRASDIACRYGGEELMLILPDASLAD 1271 Query: 439 AAQLPERIEKRLQHIAPQKE------IGFSSGIYAMKEND-TLHDAYKASDERLYVNKQN 491 Q E+I ++ + + I S G+ A E+ T + A+D LY K Sbjct: 1272 TKQRAEQIRHDVKGLQIEYHHKLLDAIAISVGVAAFAEHGSTAQELIAAADRALYQAKAQ 1331 Query: 492 KNSR 495 R Sbjct: 1332 GRDR 1335 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 7/183 (3%) Query: 319 WILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 + +A+ L + + L++ + + D +T L+NR+ L + L + + + Sbjct: 326 VLHSAMRHLALAVKNALLFREMRLQADHDGLTQLHNRRHFDTRLREELDRHGRYSMPLTL 385 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 + +D+D KQIND GHQ GD + LA ++++IR +DY R GG+EF IL + Q Sbjct: 386 MMLDIDYFKQINDRFGHQAGDAVLRELASVLRETIRTTDYCARYGGEEFVAILPHTDEQQ 445 Query: 439 AAQLPERIEKRLQ-----HIAPQKEIGFSSGIYAMKEN--DTLHDAYKASDERLYVNKQN 491 A L ER+ K ++ H + S G+ K + + +D LY+ K N Sbjct: 446 ARVLAERLRKNIESRVFRHHGKTIQATVSIGLTGFKPGALTPRDELVREADAALYLAKAN 505 Query: 492 KNS 494 + Sbjct: 506 GRN 508 >UniRef50_B9ZS17 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZS17_9GAMM Length = 491 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 8/249 (3%) Query: 248 IFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILY 307 I YT W + D +G + + L V P I + +D Sbjct: 238 IAYTLFATAAWHPSSQVNPDDRTGSHELSRRRLYILGSAAVLV---PAIILFTAGVDTDT 294 Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQ 367 ++ S+L ++L + ++R R Q + + + +D +TG NR+ L LE L Sbjct: 295 VRVAAGASILIFLLVLYRMSGLIRETQRQAQALEQLSRTDPLTGAANRRHLETVLEDELA 354 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 ++ + + + ID+D KQ ND GH +GD + L A Q +R SD R GG+EF Sbjct: 355 RVRRLDTPLALAFIDLDYFKQYNDLHGHAQGDRLLRDLVTAWHQELRPSDTIARYGGEEF 414 Query: 428 CIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYV 487 ++L + P A + ER+ +R + S+GI + +T + +D+ LY Sbjct: 415 VVVLPHTGPDQAGTVIERLRQR-----TPNQQTCSAGIACAEPMETAESLLRRADQALYR 469 Query: 488 NKQNKNSRS 496 K ++S Sbjct: 470 AKDEGRNQS 478 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 114/262 (43%), Gaps = 6/262 (2%) Query: 239 DINKNNLRNIFYTHDRPL--LWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGG 296 ++ ++L + + ++ L L R L + I+ L + + L Sbjct: 245 ELEDHSLTLLLHEGEQQLDNLRRRLLIFSQGGLLIGGGILVLVIYTLHGMIRSLDHLLAE 304 Query: 297 IRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRK 356 I + + + + + A ++ + RL + + +D +TGL NR+ Sbjct: 305 IG-QIGAEEDFGRRLPVAAGHEIGIIARHFNKLLEVVERLLREKDQLAGTDQLTGLNNRR 363 Query: 357 ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS 416 L+Q L + + + + D+D K++NDT GH+ GDL + +AQ ++ ++R++ Sbjct: 364 RFKELLDQELIRYRRIPKPLSLLIFDIDHFKRVNDTYGHETGDLVLKEMAQLLQATVRRT 423 Query: 417 DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTL 474 D R GG+EF ++L +T + A L E++ + ++ + S G+ A + + Sbjct: 424 DTPARWGGEEFLVLLPATTAEAAMALAEKLRQAIEEHDFPRVGRVTASFGVAAFHDGEQE 483 Query: 475 HD-AYKASDERLYVNKQNKNSR 495 + D+ LY K+ +R Sbjct: 484 ESALLRRVDKALYQAKRQGRNR 505 >UniRef50_A1HS81 Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS81_9FIRM Length = 553 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 3/211 (1%) Query: 286 YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENI 345 + L ++ ++ I +W + L V + ++ + + + ++ Sbjct: 335 FCRGDEALDKNAPINSEVEFAGGIWDTWW-IPLGEDIYLHYATDVTRYKKMEEELRQLSV 393 Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D++T +YNR+ +LE+ +++ ++GS + +D+D+ K IND GH GDL + + Sbjct: 394 TDSLTNVYNRRYFVQKLEEEIERAKRAGSKFSLVMLDIDRFKSINDRFGHNAGDLVLKSM 453 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSS 463 A+ IK IRK D R GG+EF ++L ++T A L E + + L + + S Sbjct: 454 AEMIKNRIRKIDTLARWGGEEFVMLLPETTVNKAVVLVEELRESLSQMDIPGVGRVTASF 513 Query: 464 GIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 G+ DT+ + D +Y K + Sbjct: 514 GVVGYCPGDTIDTLMQRVDALMYEAKAAGRN 544 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 7/182 (3%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 L + + +L + + R+ D +TG+ NR+ + EQ +Q+ + + + F Sbjct: 404 LRMIGTSTDITERKQLEEELKRQARIDFLTGVSNRRYFMEQAEQEIQRTSRYDTPLSFFM 463 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 +D+D KQ+NDT GH+ GD+ + +A ++++R+ D R+GG+EF I+L ++ AA Sbjct: 464 LDIDLFKQVNDTYGHKSGDIVLKRMASVCRETLREIDIIGRVGGEEFAILLPETDKAQAA 523 Query: 441 QLPERIEKRLQ------HIAPQKEIGFSSGIYA-MKENDTLHDAYKASDERLYVNKQNKN 493 ++ ER+ L + S G+ + + D + +DE LY K+ Sbjct: 524 EVAERLRSVLADEKVPTEAGAPIQFTVSIGVASRVSSQDNIDMLLNLADEALYQAKKYGR 583 Query: 494 SR 495 +R Sbjct: 584 NR 585 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 L + RL + + D++TGLYNR+ L LE+ + + + G + + +D+D Sbjct: 457 LHARIEEIGRLQVALQELAVRDSLTGLYNRRYLDETLEREVSRARREGIPLSLVMLDIDH 516 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQ+NDT GHQ GD + +LA + IR D A R GG+EF I+L + + + Sbjct: 517 FKQVNDTYGHQVGDEVLRILASTLSADIRAEDVACRYGGEEFLILLPNMPLETTMLRAQG 576 Query: 446 IEKRLQHIA-----PQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ++ ++ Q S G+ A E+ T D + +D+ LY K ++ Sbjct: 577 WRSAVEALSVKHGNFQITFTISLGVAAYPEHGKTPDDLTRCADQALYRAKNEGRNQ 632 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 14/231 (6%) Query: 279 SEDNLFQYVSYVHDLPGGIRVSLSIDILYF---------ITSSWKSVLFWILTALILLNM 329 + S V DLP + V + +D + +S L + A+ L Sbjct: 263 DRVKRYYVFSRVGDLPLIVVVGVGMDAVTAPWQAQWLAGAATSVVLCLLILGAAVALRRE 322 Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 + F + Q R + +D++TGL NR+ ++ Q+ + SS+ + +D+D KQ+ Sbjct: 323 MLRRFEIEQEFLRLSQTDSLTGLPNRRHFDEFGQREWQRAARQRSSIAVLMVDIDHFKQV 382 Query: 390 NDTLGHQEGDLAITLLAQAIKQSI-RKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 ND +GH GD + ++ I+ S+ R D+A R GG+EF IIL ++ AA + ERI Sbjct: 383 NDRIGHPGGDRVLREVSDIIRASLHRPGDFAGRYGGEEFAIILPETDAPAAAHVAERIRA 442 Query: 449 RLQHIAPQK--EIGFSSGIYA--MKENDTLHDAYKASDERLYVNKQNKNSR 495 ++ + + S G+ A TL + A+D LY K+ +R Sbjct: 443 AIEANTAEGVAPVTVSIGLAAGLAAPKGTLAEMMIAADHALYRAKETGRNR 493 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 9/219 (4%) Query: 286 YVSYVHDLPGGIRVSLSID-------ILYFITSSWKSVLFWILTALILLNMVRMHFRLYQ 338 ++ + G I V +I I SS +L + + V ++ + Sbjct: 856 FLQFNKKRQGEIIVVPNIPVKRKNGSIFLADISSAAIILDGRTIMVGFFHDVTERKKVEE 915 Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 + +D++TG+ NR+ + L L++ + G+ + + D+D K++ND GH G Sbjct: 916 EIKLLATTDSLTGIANRRAFSTHLASELERSNRYGTPLSLVMFDIDYFKKVNDNFGHDAG 975 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-- 456 D + L++ +K++IR D R GG+EF +++ +S A E++ + + Sbjct: 976 DDVLQALSELVKRNIRAVDIVARWGGEEFMLLMPESDISAATAAIEKLRREISDFPFGQV 1035 Query: 457 KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S GI N+ K D+ LY K+ +R Sbjct: 1036 GSLTVSFGITVFVLNEDSKVFLKRVDDALYQAKEKGRNR 1074 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 12/233 (5%) Query: 275 IINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLN---MVR 331 I + S G V + + F + + I A+ ++ MV Sbjct: 256 IEVSIRSVIALPFSVDRGQYGVFLVRRTREQELFGPADLEFAQAVITAAVAVIQRAQMVE 315 Query: 332 MHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIND 391 + + +D +T L NR+ LT + +++ ++ S++ + ID+D K++ND Sbjct: 316 STMADNARLEQLAQTDPLTQLLNRRALTERITAEMERALRYDSTLALLMIDLDHFKKVND 375 Query: 392 TLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ 451 T GH GD + + Q + +IR SD R GG+EF ++L ++ A ERI ++ Sbjct: 376 TYGHLVGDDVLRDVGQLLGHTIRGSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAME 435 Query: 452 HIAP-------QKEIGFSSGIYAMKEN--DTLHDAYKASDERLYVNKQNKNSR 495 ++ S G+ + + D + +D LY K +R Sbjct: 436 EHPFARDSMAEPLKLTASIGVAVFPAARIENVEDLFARADAALYRAKAEGRNR 488 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 115/246 (46%), Gaps = 12/246 (4%) Query: 262 NVTLTDTDSGRDIIINQSEDNLFQYVSYV---HDLPGGIRVSLSIDILYFITSSW--KSV 316 ++ + D R + + ++ + + + L F+T + + Sbjct: 55 DLEMPRMDGFRFLTMMRAREEFQDLPVIILTGREDRDTKIRGLEQGASDFVTKPFDTGEL 114 Query: 317 LFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 + + L + + R + + +I+D +T L+NR+ L +++ Q+ + G+ + Sbjct: 115 VARVRVQLKMKGLQDELKRSNEMLRTLSITDPLTHLHNRRHLMEMVDKEFQRSSRKGAPL 174 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 + +D+D K+INDT GHQEGD +T+LA +++ +R D A R GG+EF ++L ++ Sbjct: 175 SLVILDIDYFKKINDTYGHQEGDRVLTILADIVRRRLRSYDLAARYGGEEFVLLLPETPV 234 Query: 437 QIAAQLPERIEKRLQHIAPQKE-----IGFSSGIYAMKEN--DTLHDAYKASDERLYVNK 489 Q A + ER+ +Q + I S G+ + +++ ++ +DE LY K Sbjct: 235 QEALSIAERLRLEVQEHVFEGSLGGLVITISLGVATYPSSRVESIDSLFRQADEALYRAK 294 Query: 490 QNKNSR 495 Q +R Sbjct: 295 QGGRNR 300 >UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SM80_AERS4 Length = 432 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 65/331 (19%), Positives = 134/331 (40%), Gaps = 17/331 (5%) Query: 180 NWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLD 239 W F+ S I ++ I ++ +++ Q + V GI+ Sbjct: 97 WWRFILSPIIIPEQSRITRIIVTAIDITAKKQ-LEDALKMSRKRFEAVVNSAYDGIIS-- 153 Query: 240 INKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRV 299 ++ + + T + + ++ + + ++ F+ S + Sbjct: 154 VSSESRIELINTAACEMFGVDESYVGKRLETLLPLRFRSNHESYFRAFSNSPINSRPMHA 213 Query: 300 SLSIDILYFITSSWKSVLFWILTAL-------ILLNMVRMHFRLYQNVSRENISDAMTGL 352 S+ L S + + L +L + RL + + +D +TG+ Sbjct: 214 RASVMGLRRDGSEFPQEVTIAKINLGQTTEMTAILRDISERARLVEELKVAATTDPLTGI 273 Query: 353 YNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQS 412 NR+ ++Q +Q+ + G ++ + +D+D KQ+NDT GHQ+GD AI L + I + Sbjct: 274 ANRRRFDELVKQEVQRCQRFGHTMSLLLLDIDHFKQVNDTHGHQQGDQAILSLVRRIAKQ 333 Query: 413 IRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP------QKEIGFSSGIY 466 +R+ D R GG+EF I+L +++ +A ERI + + + + S GI Sbjct: 334 LREVDILGRWGGEEFIILLPETSLDLAWASAERIRLAIASESHPLGADIEIPLTVSIGIS 393 Query: 467 AMK-ENDTLHDAYKASDERLYVNKQNKNSRS 496 A + D + + + +D LY+ K+ + Sbjct: 394 ASQGPQDNVDNMVRRADTALYLAKKQGRNCC 424 >UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter RepID=B8JB86_ANAD2 Length = 764 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 6/183 (3%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 +L + RL+ R +D +TGL N + L+ L + + G + Sbjct: 568 LLVISMHAAQSIDRARLFDQTERLATTDGLTGLTNHRTFQERLDAHLGQAQRYGKRTSLL 627 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 D+D K +NDT GH GD + +A+ + ++ R +D R GG+EF I++ ++ A Sbjct: 628 LCDIDHFKSVNDTYGHPVGDQVLRGVARTLARAARGTDVVARYGGEEFAIVMPETDTGGA 687 Query: 440 AQLPERIEKRLQHIAPQ-----KEIGFSSGIYAMKENDTLH-DAYKASDERLYVNKQNKN 493 + ERI +++ + + ++ S G+ ++ + +D LY K++ Sbjct: 688 MVIAERIREKVGQLVFETEQGPLKVTLSLGVATFPDDGAQKPALIERADACLYHAKRHGR 747 Query: 494 SRS 496 ++S Sbjct: 748 NQS 750 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 6/178 (3%) Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 +++ + V R + + R +D MTG++NR+ ++ + + G + + ID+ Sbjct: 145 MLIYSDVTDIVRNAEELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMIDI 204 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 D K IND GHQ GD I LA+ + R D R+GG+EF ++L ++ A + Sbjct: 205 DHFKSINDDFGHQVGDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAVA 264 Query: 444 ERIEKRLQHIAP-----QKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 ER+ + + S G D + D +A+D LY K +R Sbjct: 265 ERLRGEVAASSLLMASGSVRATVSIGAATSAATIDGISDLMRAADRALYEAKHGGRNR 322 >UniRef50_B3E3B5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E3B5_GEOLS Length = 669 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 94/248 (37%), Gaps = 10/248 (4%) Query: 250 YTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFI 309 +D L + R++++ D V V + + ++ Y Sbjct: 426 IHNDYAALPNKKGLPPGHAPVIRELVVPVIRDERIVAVLGVGNKGNNYTTRDAEEVAYLA 485 Query: 310 TSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKL 369 +W+ + + + ++ E D +TG+YNR++ L + Sbjct: 486 DVTWEIIDS--------RRAQQELKHANELLATEARIDFLTGIYNRRMFDGLLVAETARA 537 Query: 370 VQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCI 429 + S + I +D+D KQINDT GH GD + +A+ I IR D R GG+EF I Sbjct: 538 CRYNSPLSLIMLDLDHFKQINDTQGHAAGDHVLQKVAELISGRIRSHDIFSRWGGEEFVI 597 Query: 430 ILVDSTPQIAAQLPERIEKRLQHIAP--QKEIGFSSGIYAMKENDTLHDAYKASDERLYV 487 + + AA L E + ++ + S G+ + + +D LY Sbjct: 598 LTPKNDTAQAAVLAEILRDMIEQYDFGNGLRLTCSFGVTRHICGEPAEVFIERADTALYQ 657 Query: 488 NKQNKNSR 495 K N +R Sbjct: 658 AKHNGRNR 665 >UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUF5_9AQUI Length = 283 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 51/162 (31%), Positives = 95/162 (58%), Gaps = 1/162 (0%) Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 L + + +D++TG YNR+ + L + +++ + G+ + + ID+D K++NDT GH Sbjct: 119 LIRELRFLADTDSLTGFYNRRKIEEILAKEIERSRRYGNPLSVLFIDVDNFKELNDTYGH 178 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP 455 + GD + +A+ IK +R++DY R GG+EF +IL ++ Q A ++ ERI KR++ Sbjct: 179 KSGDEVLRKIAEIIKSELRRTDYVGRFGGEEFMVILPETDSQSALRVAERIRKRVEREDF 238 Query: 456 Q-KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + ++ S G+ +KE D L+ + D +Y+ K+ +RS Sbjct: 239 KTGKVTVSVGVTELKEGDDLNTLFNRVDRAMYLAKERGKNRS 280 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 123/295 (41%), Gaps = 16/295 (5%) Query: 213 QRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGR 272 QR KQ L V + I+ N +R + Y+ D V G Sbjct: 135 QRLKQITDVLGEGVLLVDSDGKIIFA--NPEAMRLLGYSFDEIEGCLIHEVIHKQQPDGT 192 Query: 273 DIIINQSEDNLFQYVSYVHDLPGGIRV---SLSIDILYFITSSWKSVLFWILTALILLNM 329 ++ ++ G+ L + I + + +K+ A+I Sbjct: 193 LYNSGENPFFNAIVSGNDYNNDDGVFTCKSGLLMPISFACRAVFKNETR--DGAVIAFRD 250 Query: 330 VRMHFR-------LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 + + + + + + ++ +DA+TG++NR L +++ + ++ I D Sbjct: 251 ITVQKKNLQSLEGINELLEKQASTDALTGIFNRMKFNQTLTSEIKRAKRYRVALSLILFD 310 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D KQ+ND+ GH GD + LA+ + ++R+ D R GG+EF I +++ + A +L Sbjct: 311 IDHFKQVNDSYGHLSGDTVLKHLARLVASNLREIDIFARWGGEEFVIQAPETSLESAIKL 370 Query: 443 PERIEKRLQHIAP--QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 E++ ++++ K+I S G+ + +D +DE LY K+ ++ Sbjct: 371 AEKLRSKIENYVFPAPKKITVSFGVATFRSSDNDITLVNRADEALYRAKEGGRNQ 425 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 7/184 (3%) Query: 319 WILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 T + + + +L + + +I D +TGL+NR+ L LE+ + + ++ +V Sbjct: 816 LARTVAEQMALAIANLQLREELQNRSIRDPLTGLFNRRYLEESLEREINRACRNDHNVGV 875 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 I ID+D K+ NDT GH GD + + + +K S+R SD A R GG+E +IL +++ + Sbjct: 876 IMIDIDHFKRFNDTFGHDGGDAVLKEVGKLLKSSLRASDIACRYGGEEMTLILPEASIEN 935 Query: 439 AAQLPERIEKRLQHIAPQKE------IGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQN 491 + E++ K ++ I + + I S G+ E T + +D LY K+ Sbjct: 936 TYKRAEQVRKLIKQINIEHKRQSLGTITASLGVACFPEHGMTGDAVVQRADTALYQAKKE 995 Query: 492 KNSR 495 R Sbjct: 996 GRDR 999 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L + + RLY+ V R +I D +TGL+N L + L + ++G + + +D+D Sbjct: 212 LGLAIDNARLYETVRRLSIYDPLTGLFNHGQFYNLLAEELSRHQRTGRPLSLLMLDIDHF 271 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K++NDT GH+ GD + L+ +K+ R D R GG+E +IL ++ + A Q ER+ Sbjct: 272 KKVNDTYGHRAGDAVLQQLSGLLKKQARAIDRVCRYGGEELALILPETDREAARQTAERL 331 Query: 447 EKRLQHIAP------QKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + ++ + + S G + + A+D LY K+ +R Sbjct: 332 RRHVEKCCFATCGQQEIGVTVSIGAATCPDAAISAETLVNAADRALYAAKRAGRNR 387 >UniRef50_A0YKK9 GGDEF domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YKK9_9CYAN Length = 514 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 118/292 (40%), Gaps = 11/292 (3%) Query: 211 QDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDS 270 D RT ++ VY + + N + N+ + + L + D Sbjct: 220 PDARTGLEMVR-KNKVYGYIDTLPTISYQLKTNRMPNLKISGELDLDYDVSIAVRNDRPL 278 Query: 271 GRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMV 330 II Y I VS Y + +V IL+ L N++ Sbjct: 279 LLSII--NKAIATISYEDRQKIFYYWISVSYDKGFDYVLFWEIMAVSLVILSLLFYRNLI 336 Query: 331 RMH-----FRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + + +D +TGL+NR I+ E E+ + + + + +D+D Sbjct: 337 ISRYNKKLIEANKKLDCLYKTDKLTGLFNRHIIDEETEKEVLRANRYNLGFSVVLLDVDH 396 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQINDT GH GD + +A +K ++RK+D R GG+EF +I ++ AA L E+ Sbjct: 397 FKQINDTYGHHVGDSVLVEIAFILKNNLRKTDVVGRWGGEEFIVICPETQLTNAAHLAEK 456 Query: 446 IEKRLQHIAPQK---EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 + +++ I S G+ A + +DT+ K D LY +K+N + Sbjct: 457 LRSQIECHQFSGVEKTITASFGVSAYRVDDTVESLIKRVDSTLYFSKRNNRN 508 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 9/269 (3%) Query: 235 IVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLP 294 I + + + L +V + T + D+ + L Sbjct: 111 IYFTLYDASTNARVITMSFYITLCTVASVLVIKTGTVADVKAALVLLMSVFSAHSIFMLV 170 Query: 295 GGIRVSLSIDILYFITSSWKSVLFWILTALILLNM-----VRMHFRLYQNVSRENISDAM 349 +I F+ +S L +I+TA++L + ++ RL Q++ ++ D++ Sbjct: 171 RIWITLKEPNIDDFLQASSIHQLAFIITAILLSTIGFTYNWLLNARLMQSLYSSSMKDSL 230 Query: 350 TGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAI 409 T LYNR+ + L + + V+ + I +D+D KQ+ND GHQ GD + + + Sbjct: 231 TQLYNRRAMNEMLRREWMRSVRHNHPLSVIILDIDHFKQVNDQHGHQTGDQVLKKIGIIL 290 Query: 410 KQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP----QKEIGFSSGI 465 + ++R +D R GG+EF I+L D+ A ++ E++ ++ + S G+ Sbjct: 291 QHNLRAADIPFRYGGEEFLIVLPDTRIGEACKVAEKLRIIIEETKFWRQQSANLTASFGL 350 Query: 466 YAMKENDTLHDAYKASDERLYVNKQNKNS 494 + D + K +DE LY K+N + Sbjct: 351 SELWAEDKVPSMIKRADEALYYAKENGRN 379 >UniRef50_Q30WV4 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WV4_DESDG Length = 398 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 24/195 (12%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 ++ V H R+ + +S +D +TGL NR+ ++++ SG + + +D+D Sbjct: 187 VVLDVTAHRRMLEELSHMARTDPLTGLNNRRFFMEAARAEVERMQSSGRPLSLLMLDIDH 246 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K++NDT GH GD+ + L+ + +++R D RLGG+EF ++L ++ A + E Sbjct: 247 FKRVNDTWGHDAGDMVLKQLSCCLAETMRGQDVCARLGGEEFAVLLPETGHAEACRAAET 306 Query: 446 IEKRLQHIAP---QKEIGFSSGIYAMKE---------------------NDTLHDAYKAS 481 + + + +A + S G+ + + K + Sbjct: 307 LRQAVAGMAFAGHGFSVTSSLGLTTLDSAGHAVSGQRPVPGGVAVSACCGQVVEILLKRA 366 Query: 482 DERLYVNKQNKNSRS 496 D LY K+N +R+ Sbjct: 367 DIALYAAKKNGRNRT 381 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 69/479 (14%), Positives = 152/479 (31%), Gaps = 27/479 (5%) Query: 35 MSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTH 94 ++A + + F + + ++ + + N Sbjct: 528 LAASSDHSFKINKLDFSGLNDAQLTFQISLKGPYVFLATDRGLIYHHQKNDTWGIINRDQ 587 Query: 95 GLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKF 154 GL L + G + FD + G + Y + Sbjct: 588 GLPLDNYMSMAFDGDANIWLGSNRGALF--IAHDVFDDFLNGKIDKLTYQRFTEVDGMGS 645 Query: 155 HYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVF-----TGRTVLSSI 209 + P + W G I D++ + + +++ Sbjct: 646 SQINSGS--------PAMIRSSTGRVWMSTARGVSSIAPSDLKSMVQVAPPAVISSVTAD 697 Query: 210 YQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTD 269 + ++ + + V G ++ D + +R + + + T Sbjct: 698 GERVTYGGHIPADTQRLVVNYAGLGYLMADHIEYQVRLVGFDDNWLARGSMTTSEYTSLP 757 Query: 270 SGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNM 329 + + ++ + V + + IL + + Sbjct: 758 ANDYVFQVRAAYPGGAWSDPVSFAFTRSEHPWQQSWFWLSIIFALGLAATILVRARIRFL 817 Query: 330 VRMHFRLY-------QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 +L + + D++T L NR+ +L+ ++ +S + ID Sbjct: 818 NNQRAQLELMVAEKTKELKGLARQDSLTQLGNRRAFDEQLQYEFKRCERSEQPLSLAIID 877 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K IND H GD + L+ + +R DY R GG+EF +++ ++T + A Q Sbjct: 878 VDHFKSINDRFLHVIGDQVLIELSALLSNMLRDIDYIARWGGEEFALLMPETTAKEALQA 937 Query: 443 PERIEKRLQ-----HIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 ERI +R++ H+A + + S G+ + + A+D+ LY KQ+ +R+ Sbjct: 938 AERIRQRIEDTSYQHLADELAVTVSIGVASSEHYPNHSALLVAADKALYKAKQSGRNRT 996 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 52/174 (29%), Positives = 94/174 (54%), Gaps = 4/174 (2%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +++ + +L + + ++NI DA+TGLYNR+ L L++ L++ + S+ I ID+D Sbjct: 307 HISLALANIKLCETLKQQNIRDALTGLYNRRYLEESLKKELERAKRKERSLGIIMIDVDH 366 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K +NDT GH +GD + L +++ IR SD A R GG+E +IL +++ + Q E+ Sbjct: 367 FKNVNDTFGHDKGDQVLKKLGGFLQRHIRGSDIACRYGGEELTLILPEASLENTRQRAEQ 426 Query: 446 IEKRLQHIAP---QKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + + ++++ + S GI E+ + K +D+ LY KQ R Sbjct: 427 LRQAVKNLDLDLCDHTLTISVGIACFPEHGYSGKALLKTADQALYQAKQQGRDR 480 >UniRef50_Q2VZ27 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VZ27_MAGSA Length = 355 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 117/286 (40%), Gaps = 23/286 (8%) Query: 229 AGQLKGIVLLDINKNNLRNIFYTHD-------RPLLWRFLNVTLTDTDSGRDIIINQSED 281 GQ+ ++ DI + R + RPL + + D ++ + + Sbjct: 69 TGQVIDLLPADILPADRRFMLEFEYGFVRRTGRPLWRSYTALFGQDLPQTWQRLVLPAGN 128 Query: 282 NLFQYVSYVHDLP-----GGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRL 336 +Y D+P G + L ID + + + + L+ R Sbjct: 129 GRLVVGAYPVDVPPPAQGGEALLHLVIDRVPVVLAEDGGIEDLALSLGAFC----DTSRH 184 Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 + D++T NR+ L + G S +A+D+D K+INDT GH Sbjct: 185 MAELEELASRDSLTQTANRRHFEHLAGLELDHARRMGRSFALLALDIDHFKRINDTWGHA 244 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 GD A+ A A + S+R+ D R+GG+EF + L ++ P A + ER+ ++ + + Sbjct: 245 AGDEALKAFANACRLSLREYDILGRIGGEEFAVALPNTGPDGARVIAERLRAAVEELVVR 304 Query: 457 ------KEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ++ S GI ++E D T+ + +D+ LY K + +R Sbjct: 305 PAKGELFDLTVSIGIAQLREGDLTVETMLERADQALYRAKNSGRNR 350 >UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIT1_HALO1 Length = 732 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 117/297 (39%), Gaps = 12/297 (4%) Query: 208 SIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTD 267 +IY+ +R + V S+ A + L D+ + + + + L D Sbjct: 424 TIYEPERKRHRVYSVRVSDEDAPLIDPESLADLEFRDNTGLAAMVVKNKHYLPAGGELRD 483 Query: 268 T--DSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALI 325 + + ++L D G + S + F + + Sbjct: 484 LTAPVYTKQVRLKEAESLLVLPLLSGDEAIGTFMLASRERQQFGKDVREM----LGIIAN 539 Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + + + +Y+ + +D +TGL N + L Q L + ++ + D+D Sbjct: 540 QVAVSLQNGMMYKTMETMATTDGLTGLTNHRTFQDRLVQLLDRAERTRQPAAILLCDVDH 599 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K +NDT GH GD + +A + +S+RK D R GG+EF ++L + + A L ER Sbjct: 600 FKNVNDTYGHPIGDEVLRQVAGVLLRSVRKIDIPARYGGEEFAVVLEATDLEGAMNLAER 659 Query: 446 IEKRLQHIAPQ-----KEIGFSSGIYAMKENDTLHD-AYKASDERLYVNKQNKNSRS 496 I K + + ++ S GI + ++ T + +D LY+ K++ +R Sbjct: 660 IRKDVAALVVDSDKGPFQVTMSIGIASFPDDATDRAVLIERADSALYLAKESGRNRC 716 >UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8J1_ALHEH Length = 689 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 5/199 (2%) Query: 302 SIDILYFITSSWKSVLFWILTALILLNMVRMHFRL---YQNVSRENISDAMTGLYNRKIL 358 S + + + L + ++ +L + + R+ +D++TG++NR + Sbjct: 486 SAPWRDIEREAVLDLADEVAVLLSRKEIDLLNAQLTEANRRLKRQATTDSLTGVWNRYRM 545 Query: 359 TPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDY 418 ++E + G+ + D+D K +ND GH+ GD + LA+A+ +R +D+ Sbjct: 546 QEQIELERGAHERYGTPCSLLLFDIDHFKAVNDQYGHEAGDQVLVALARAVVGELRATDF 605 Query: 419 AIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHD 476 R GG+EF ++ +S P+ A L ER+ + + + + S G+ ++ DT+ Sbjct: 606 LGRWGGEEFIVLATNSAPEEAWTLAERLRQCIAGLRFPGVGPVTISVGVASLSRGDTVDR 665 Query: 477 AYKASDERLYVNKQNKNSR 495 +D +Y KQ +R Sbjct: 666 LIDRADRAMYRAKQRGRNR 684 >UniRef50_Q5SHT9 GGDEF domain protein n=2 Tax=Thermus thermophilus RepID=Q5SHT9_THET8 Length = 360 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 5/193 (2%) Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRLYQ---NVSRENISDAMTGLYNRKILTPELEQ 364 F W ++ + L + ++ + RL + + +D +TGL NR+ L LE+ Sbjct: 162 FQPVHWNALTQFFGANLAYVGLLYLLVRLKEGYMEAQLDAYTDFLTGLRNRRYLELILER 221 Query: 365 RLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGG 424 L +L + G + + +D+D K +ND GH+ GD + LAQ I+ +R+SD A+RLGG Sbjct: 222 ELFRLQRYGRPLSLVLLDLDGFKAVNDLHGHEVGDRVLQALAQRIEAHLRRSDRAVRLGG 281 Query: 425 DEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK--EIGFSSGIYAMKENDTLHDAYKASD 482 +EF ++L ++ A +L ER+ + ++ +A I S G+ + DT + +D Sbjct: 282 EEFALLLPETPLPQALRLAERLRRAVEAMAVPPVARITASFGVAEARPTDTPLTLLRRAD 341 Query: 483 ERLYVNKQNKNSR 495 E +Y K+ +R Sbjct: 342 EAMYRAKRKGKNR 354 >UniRef50_B9ZPE0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPE0_9GAMM Length = 424 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 70/340 (20%), Positives = 128/340 (37%), Gaps = 24/340 (7%) Query: 174 EYFAMNNWSFLQSGSIGIDRKDIEKVFTGR-----TVLSSIYQDQRTKQ------NVMSL 222 E F ++ + GS + R I V+ T S+ QD ++ ++S Sbjct: 87 ETFDGEVINYRKDGSTYVVRSYISPVYAEEAPERVTHYVSLQQDVTDERARDEQLRLLST 146 Query: 223 LT-----PVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIIN 277 PV + I ++ L + R D + + Sbjct: 147 AVEVSGDPVLITDPEGTITYVNAAFEELMGYSRSEVLGENPRRFKSGRQDDAFYQGMWRA 206 Query: 278 QSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLY 337 F+ +++ G + L I + K I + L V R+ Sbjct: 207 LERGESFR-GEFLNRRRDGSLIHLEQTITPVLDDHGK-----ISHYVALGKDVTDRLRME 260 Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + R +D +TG+ NR L LE +++ + G + I D+D K +ND GH+ Sbjct: 261 DEIRRVAHTDWLTGVANRLSLGNTLEAEIERSQRYGRPLSLIMFDLDHFKAVNDQYGHEA 320 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK 457 GD + LAQ + +R +D R GG+EF I++ ++ A L E++ + + ++ Sbjct: 321 GDEVLKALAQTVSAELRDADTLGRWGGEEFIIVVPETRLVGATALAEKLRQAVSTMSVPG 380 Query: 458 --EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S G+ + D+ + +DE +Y KQ R Sbjct: 381 VPGVTASFGVAELASGDSAKLLARRADEAMYQAKQAGRDR 420 >UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U463_9DELT Length = 974 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 128/310 (41%), Gaps = 17/310 (5%) Query: 192 DRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYT 251 +DI + +L ++++ + + + + + G + +D N + Y Sbjct: 672 TFRDITQRIEADRLLRE--REKQYRALFENNHSIMLLMDPRTGRI-VDANPAAVHFYGYP 728 Query: 252 HDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITS 311 D L + ++ + S Y + H L G DI Sbjct: 729 AD-TLRSMPFSDINAQDETAIFKEMVDSRREKRSYFIHRHRLADG-------DIRDVEVY 780 Query: 312 SWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQ 371 S ++ +++ + RL + + R +D++TG NR E L++ ++ Sbjct: 781 SGPIMVQGNQLLYSVIHDITERVRLEREMKRLATTDSLTGAANRHEFFRLAELELRRAMR 840 Query: 372 SGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL 431 G S+ + +D+D K INDT GHQ GD + L+ ++ ++R +D RLGG+EF +L Sbjct: 841 YGHSLAVLMLDIDYFKSINDTHGHQTGDAVLKALSALVRTTLRDTDIFGRLGGEEFAAVL 900 Query: 432 VDSTPQIAAQLPERIEKRLQHIAPQKE-----IGFSSGIYAMKENDT-LHDAYKASDERL 485 ++ + +R+ + L + + S G+ ++++ + DA +DE + Sbjct: 901 PETDLAGGVLVADRLRRELGALKVRLRDIEVMFTVSIGLTETRKSERLIDDAINRADEAM 960 Query: 486 YVNKQNKNSR 495 Y K+ +R Sbjct: 961 YKAKRMGRNR 970 >UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-binding domain protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RTE2_9PROT Length = 483 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 5/173 (2%) Query: 328 NMVRMHFRLYQ---NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMD 384 + + + L Q + + +D +TG +NR+ + + + +L + + + +D+D Sbjct: 146 RLRQANQELQQTVVELEQVAGTDKLTGAWNRRRIEECVRSEMDRLNRYDQPLSLLVVDID 205 Query: 385 KLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPE 444 K IND GH GD + + ++ +R +D R GG+EF ++ ++ AA L E Sbjct: 206 HFKAINDQHGHGAGDQVLQAVTALLQSRLRGTDALARWGGEEFVVVCPNTGRSTAALLAE 265 Query: 445 RIEKRLQHIAPQK--EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 R+ ++ ++ S G DT + ++ +DE LY K ++ Sbjct: 266 RLRGQIASADFPLIGQLTVSIGAAECSPGDTWEEWFQRADEALYRAKTGGRNQ 318 >UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8G7_ALHEH Length = 237 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 2/178 (1%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 + + R + + +DA+TG+ NR T L + +++ + V + Sbjct: 48 VKLIFCNCRDITERKRDQERIRYLATTDALTGIMNRGEFTRHLTKEIERAARFNRPVAVV 107 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 D+D K++NDT GH GD + + +IR+ D R GG+EF ++L ++ A Sbjct: 108 MYDLDHFKRVNDTYGHDAGDEVLKTAVAQVNNAIRRVDVHARWGGEEFILLLPETDLAAA 167 Query: 440 AQLPERIEKRLQHIAP--QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + ER+ + + + S G+ + D K +D+ LY+ K +R Sbjct: 168 VKSAERLRAAIAEHPFKQPERVTASFGVTTLGPRDRFDVLIKRADDALYLAKHAGRNR 225 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 7/176 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 + M + L + ++I D +TGL+NR+ L L Q + + + + I +D+D Sbjct: 1200 IGMAIANLNLRATLEHQSIRDPLTGLFNRRYLEEYLSQEIARAQRQKHPIGVIMMDIDNF 1259 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K NDT GH GD + + + +KQ +R+ D A R GG+E +IL S+ + + E+I Sbjct: 1260 KHFNDTFGHDAGDYVLQKVGELLKQKVREYDVACRYGGEEMTLILPGSSLENTSMRAEQI 1319 Query: 447 EKRLQHI------APQKEIGFSSGIYAMKENDTLH-DAYKASDERLYVNKQNKNSR 495 + + + I S G+ A ++ ++ D +A+D LY K + +R Sbjct: 1320 REAIASLVVASGGQHLGSITASFGVAAFPKHGSIGIDLIQAADAALYRAKADGRNR 1375 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 17/242 (7%) Query: 271 GRDIIINQSEDNLFQYVSYVHDLPGG-----IRVSLSIDILYFITSSWKSVLFWIL---- 321 GR + Q + LF LP + L F+ + +L I Sbjct: 517 GRSHGVKQGQHALFCNHVNDQHLPLASLCIPLIAQGETLGLLFLCTFKGEILPDIRQQLA 576 Query: 322 -TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 T L + + +L + + +++ D +T L+NR+ L L Q L + + SV + Sbjct: 577 KTVAEQLALAIANLKLREQLEEQSLRDPLTKLFNRRYLEQRLSQELARAKRHHYSVGVLM 636 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 ID+D K+ ND+LGH GD + + +K +IR SD A R GG+E IIL D+T + A+ Sbjct: 637 IDVDHFKRFNDSLGHDAGDRILASIGTLLKNNIRTSDVACRYGGEEITIILPDATLEEAS 696 Query: 441 QLPERIEKRLQHIAPQK------EIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKN 493 Q E + + + + + + S G+ + +T + + +D+ LY KQ Sbjct: 697 QKAEFLRQAIAEMKIEYSGKIVNSVTASFGVACYPDHGETGQEIIQIADKALYDAKQAGR 756 Query: 494 SR 495 +R Sbjct: 757 NR 758 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 8/184 (4%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 ++ ++ V RL Q + R +D +TGL NR+ + +++ V+ + + Sbjct: 273 LIGVTGVMVDVTESHRLRQELERLATTDPLTGLSNRRAFLMRAREEVERAVRHDRPMSVV 332 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS-DYAIRLGGDEFCIILVDSTPQI 438 ID+D K +ND GH GDL + +A ++ ++R S D A R GG+EF ++L ++T Sbjct: 333 MIDVDHFKSVNDRYGHDIGDLVLQDVAATVQGALRNSGDVAARFGGEEFVLLLPETTVSG 392 Query: 439 AAQLPERIEKRLQHIAPQ-----KEIGFSSGIYAMKENDT--LHDAYKASDERLYVNKQN 491 A QL ERI + A + S G+ + + + K +D+ LY K+ Sbjct: 393 AQQLAERIRVAFERTAVETEQGAVRFTASFGVDVFRSDMDTGIDTVLKRADDALYRAKEA 452 Query: 492 KNSR 495 +R Sbjct: 453 GRNR 456 >UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AV70_SYNWW Length = 459 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 131/275 (47%), Gaps = 13/275 (4%) Query: 232 LKGIVLLDINKNNLRNIFYTHDRPLLWRFLNV---TLTDTDSGRDIIINQSEDNLFQYVS 288 + LD+N++ L + ++ D + + +++ +++++ + + ++ Sbjct: 184 FDESIYLDVNESFLNTLGFSRDEVIGHSCSELGILSISQKKEIQEMLLKKGKIRNWE-SK 242 Query: 289 YVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALI-----LLNMVRMHFRLYQNVSRE 343 ++ + LS+D++ ++F +T I L + L + + + Sbjct: 243 FIAKAGEEVPGLLSVDLIQLRDKKLLLMVFHDITERIRMKEELEEKNQQLRELNRILQVQ 302 Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 I+D++TGLYN + + +L+ + + + + + +D+D K IND GHQ GD+ + Sbjct: 303 AITDSLTGLYNHRQVLEKLQLEIARANRYQQELTIMMLDIDHFKSINDEFGHQVGDVVLV 362 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE---IG 460 +AQ IK+++R D A R GG+EF IIL + Q+ ERI ++++ + I Sbjct: 363 EVAQIIKRNLRNIDIAGRYGGEEFLIILPQTNLNNGRQVGERIRRQVEIEGFEDSKEGIT 422 Query: 461 FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S GI + + + D + +D+ LY K+ +R Sbjct: 423 VSIGISQ-HQGEEMVDYIERADQLLYRAKRKGRNR 456 >UniRef50_A4VQF4 GGDEF domain protein n=3 Tax=Proteobacteria RepID=A4VQF4_PSEU5 Length = 466 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 100/251 (39%), Gaps = 5/251 (1%) Query: 247 NIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDIL 306 N+ + + ++ I+N++ + + + S Sbjct: 208 NLKIAGQVASTDNQFRIGVLKSEPVLRDILNKAIATITPVELHQIANRHAPILVESGTDY 267 Query: 307 YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL 366 + +LT+L +R RL + ++ +D++TGL NR L L Sbjct: 268 RLLMQVVVVFSAMLLTSLFW---IRRLRRLNDQLRIKSQTDSLTGLANRAALDRRFATAL 324 Query: 367 QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE 426 ++ + + + +D+D K+IND GHQ GD + A + +R SD R GG+E Sbjct: 325 EQARRYRRPLSIVMLDIDHFKRINDDFGHQMGDRVLRDFAALLDDCLRGSDAVGRWGGEE 384 Query: 427 FCIILVDSTPQIAAQLPERIEKRLQHIAPQKEI--GFSSGIYAMKENDTLHDAYKASDER 484 F ++ +++ A Q ER+ ++ + + S+G+ + +DT + +D Sbjct: 385 FLVLCPETSGPQAVQFAERLCEQARAFPFATGVSQTLSAGVAELSPSDTPDSLLRRADAA 444 Query: 485 LYVNKQNKNSR 495 LY K R Sbjct: 445 LYRAKHEGRDR 455 >UniRef50_Q2IF81 Response regulator receiver modulated diguanylate cyclase n=4 Tax=Anaeromyxobacter RepID=Q2IF81_ANADE Length = 351 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 107/297 (36%), Gaps = 18/297 (6%) Query: 214 RTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRD 273 + + L V + D + D LL + D Sbjct: 40 DDSRTQLDWLVRVLEREEYDVRTAADGKDAIRKVRGEPPDLVLLDMI--LPDMDGLEVLR 97 Query: 274 IIINQSEDNLFQYVSYVHDLPGGIRVS-LSIDILYFITSSWKS--VLFWILTALILLNMV 330 I+ + ED + +V+ L I F+ + +L L + + Sbjct: 98 IVKARPEDQFIPVIILSVKSDLDSKVAGLRIGADDFLAKPFAEAEILARCAAMLRIKTLQ 157 Query: 331 RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIN 390 + + + ++D +TGL NR+ L++ ++ + V I ID+D K +N Sbjct: 158 DQLRETQRRLREQTLTDDLTGLKNRRAFDERLQEEFRRAHRYSDPVSLIMIDLDHFKLVN 217 Query: 391 DTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 D GH GDL + ++ ++ S R D R GG+EF +IL + A + ERI K L Sbjct: 218 DRYGHPFGDLVLRGASEQLRASTRDPDICARYGGEEFAVILPKTHLSGALAVAERIWKEL 277 Query: 451 QHIAPQ-----------KEIGFSSGIYAMKEND--TLHDAYKASDERLYVNKQNKNS 494 + ++ S GI D + + +DE LY K+ + Sbjct: 278 SARSYPVPAGSAEPDTAIQVTASMGIAFYPSKDIGSPEALVRYADEALYQAKKAGRN 334 >UniRef50_B1Y3T8 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3T8_LEPCP Length = 366 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 4/214 (1%) Query: 283 LFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSR 342 L Y L + + + F+T V+ L + + +SR Sbjct: 149 LLPRPDYSVGLMQWVTYTALFGLASFLTYQGNQVVRRALA--RAEAEIEQRKLVEAELSR 206 Query: 343 ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAI 402 I+DA+TG++NR+ + K + + + + D+D K +ND GHQ GD + Sbjct: 207 IAITDALTGVWNRRHFEQTIGAERAKAQRHHTPLSLLLFDVDHFKALNDQFGHQAGDQVL 266 Query: 403 TLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIG 460 T LA+ + +S+R D R GG+EF +IL A +L E++ + A + Sbjct: 267 TELARLVGRSLRDGDVLARWGGEEFAVILHHCPAADALRLAEKLRGLVAGHAFDRVGTVT 326 Query: 461 FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 S G+ ++ ++TL ++ D LY K + Sbjct: 327 ASFGVAELQPDETLDAWFRRVDLALYAAKSGGRN 360 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 6/179 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 + + + RL ++ +D +TG YNR+ Q LQ+ + + + Sbjct: 219 VLVCVFRDISARKRLESDLKHLATTDGLTGAYNRRSFVEVCGQELQRADRRARPTSLLLM 278 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K++ND GH GD + + + ++ +R D R+GGDEF ++L +T + A + Sbjct: 279 DIDHFKRLNDRFGHAAGDEVLRQIVETGRRVLRSEDVVGRIGGDEFAVLLPATTLEQAGR 338 Query: 442 LPERIEKRLQHIAPQKE-----IGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNS 494 + E++ + +A S G+ K + T+ + + +D LY K + Sbjct: 339 VAEQLRTTYERLAVPARGGTATFTVSFGVAEWKPHLRTVEELLQRADRALYAAKNAGRN 397 >UniRef50_Q3A5K1 Two component signal transduction response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5K1_PELCD Length = 323 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 2/170 (1%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 + + ++R ++D++TGLYNR + Q + + + G + + +D+D K Sbjct: 127 ERIHALHQAQSQLARIALTDSLTGLYNRAYFDATITQEVARCSRRGLPLSLLMVDLDHFK 186 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 +INDT GH GD A+ +A +K+ R SD R GG+EF +IL ++T AA + ERI Sbjct: 187 KINDTYGHLAGDQALAAVALVLKEQSRISDTVCRFGGEEFAVILPETTNANAATVAERIR 246 Query: 448 KRLQHIAPQKEIGFSSGI--YAMKENDTLHDAYKASDERLYVNKQNKNSR 495 K++ + + S G+ + +D LY K +R Sbjct: 247 KKISQLDLAFPVTASIGVGSAKVTNQLLPDHLIAEADGALYEAKSQGRNR 296 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 7/184 (3%) Query: 319 WILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 T + L + + +L + +++ DA+TGL+NR+ L LEQ + + ++ SV Sbjct: 1061 LARTVVEHLAIALANVKLQEKFKAQSMRDALTGLFNRRYLEESLEQEIHRARRNHYSVGI 1120 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 + ID+D K+ ND GH GD + +A+ ++ SIR SD A R GG+E +IL +++ Sbjct: 1121 VMIDIDHFKRFNDQFGHDAGDEVLKTVARLLQGSIRSSDIACRYGGEELTLILPEASLSD 1180 Query: 439 AAQLPERIEKRLQHIAPQ------KEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQN 491 E+I ++H+ I S G+ E +TL + +D LY K Sbjct: 1181 TQARSEQIRYMIEHLQLHYENQSLGSITASFGVACFPEHGETLEAVLRIADTALYQAKAL 1240 Query: 492 KNSR 495 +R Sbjct: 1241 GRNR 1244 >UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5K2_HYDS0 Length = 901 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 132/361 (36%), Gaps = 20/361 (5%) Query: 153 KFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGS---IGIDRKDIEKVFTGRTVLSSI 209 N + + ++ + + + K +G+ + Sbjct: 539 SIFDIFSPIHTKDLIEAFPNKKSILLQEFNLINKNNHLVYVKGSLTLTKDLSGKDIAIFS 598 Query: 210 YQDQRTKQNVMSLLTP-------VYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLN 262 + D ++ + +LT + + N NL ++ N Sbjct: 599 FVDTTQEKQLKDILTREKKTLENILDRANFGAFIFKLKNLENLEIEIIYKNKYFDTMIKN 658 Query: 263 VTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWIL- 321 + + +I + + L + G +++ I+ + + + Sbjct: 659 QGIKTFEDF--LIFDDDKKELMKRYLRKITADEGGVFTINDIIMKQDKNIVLKLNMNRIN 716 Query: 322 -----TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 L +L + + + +I D +TG+ NR+ L +LE+ L + + Sbjct: 717 QNHETLILCILQDITEESMIIKYFEELSIKDDLTGICNRRCLEDKLEEYLTLAKRYNRPL 776 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 I D+D K IND+ GH GD + +A + +IR +D R GG+EF II ++T Sbjct: 777 SVIMFDIDFFKHINDSYGHDIGDKVLKTIANIVLSNIRATDILARYGGEEFVIISPETTL 836 Query: 437 QIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 + A L E++ K +++ + I S G+ ++ + DT K DE LY K+ + Sbjct: 837 EDAKALAEKLRKEIENFLFEEGFSITCSFGVTSLNQEDTKETILKRVDEALYKAKREGRN 896 Query: 495 R 495 R Sbjct: 897 R 897 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 7/182 (3%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 +A+ L + + +++ V D +T +YNR L +++ + + + Sbjct: 301 FRSAVNHLGLALRNALIFKEVKLRADRDGLTRIYNRHSFDERLIYEIKRRRRYNHDLSLL 360 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 +D+D KQ+NDT GH+ GD+ + + + + ++ R +D A R GG+EF ++L ++ + A Sbjct: 361 MVDLDHFKQVNDTYGHKAGDMVLRKVGEILTETFRTTDLAARYGGEEFVVLLPHTSEEAA 420 Query: 440 AQLPERIEKRLQHIAP-----QKEIGFSSGIYAMKEN--DTLHDAYKASDERLYVNKQNK 492 +L ERI + +Q + + S G+ +++ D +D+ LY K N Sbjct: 421 WKLAERIRESIQGCVFRFDGHEFSVTASIGVASVEAGALTRDDDLLIKADKALYKAKNNG 480 Query: 493 NS 494 + Sbjct: 481 RN 482 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 7/181 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 T + ++ RL +++ +++I D +TGLYNR+ L E+ L + +S + I + Sbjct: 444 TVAETAALAIVNLRLRESLRQQSIRDPLTGLYNRRYLEESFERELHRAQRSDDPIAVIML 503 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K ND+ GH+ GD + L Q + IR D A R GG+EF ++ T A + Sbjct: 504 DIDHFKHFNDSHGHEAGDELLRALGQLLSGCIRAEDVACRYGGEEFAMVFPGMTLDQATR 563 Query: 442 LPERIEKRLQHIAPQK------EIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNS 494 +++ ++ ++ S G+ A ++ L D +A+D LY K+ + Sbjct: 564 WADQLRHTVESTQFASRGEALEQVSVSLGVAAFPQHGRHLADLIRAADAALYRAKREGRN 623 Query: 495 R 495 R Sbjct: 624 R 624 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 V + + +D++TGL NR+ E L++ + G + + +D+D Sbjct: 591 TFRDVTERKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDLSLLMMDIDY 650 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K +ND GH GD + L++ + +R D R+GG+EF I+L D+ A + ER Sbjct: 651 FKTVNDMYGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGLDGATLVAER 710 Query: 446 IEKRLQHI-----APQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + ++ + I S G+ E+ TL KA+D LY K+ ++ Sbjct: 711 LRAEIETTKMNTRSGSLNITVSIGVATYSEHTKTLEQLLKAADIGLYAAKEAGRNQ 766 >UniRef50_B3E243 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Geobacter lovleyi SZ RepID=B3E243_GEOLS Length = 646 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 6/179 (3%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 I+ ++ + + +L + + +I+D +TG+YNR+ L L + L + + G I Sbjct: 463 IIGSVTVFRDITERKQLEEQLRLLSITDPLTGVYNRRFLQETLLKELCRAERHGEPFSLI 522 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 +D+D KQ+ND GH GD + L + I++ IR SD R GG+EF ++L + A Sbjct: 523 MLDIDHFKQVNDRYGHDVGDQVLRHLVKLIQKRIRSSDCLARWGGEEFIVLLPHTGLLAA 582 Query: 440 AQLPER----IEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 A L E + + + + S G+ + DT+ + +D +Y+ KQ + Sbjct: 583 AALAETLLEDLR--VSELKGVGCVTASFGVAVSRPGDTVEQLGQRADALMYLAKQAGRN 639 >UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXY8_CHRSD Length = 608 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 7/174 (4%) Query: 329 MVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQ 388 + + RL + + +I DA+TGLYNR+ L L + L + + + + +D+D K Sbjct: 429 LSLSNVRLREQLEEASIRDALTGLYNRRFLDETLARELARAERQAVPLCVLMLDIDHFKP 488 Query: 389 INDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 IND GH GD A+ +A+ + +R+ D R GG+EF II+ + A + + + + Sbjct: 489 INDDYGHALGDRALVAVAELLNAHVRRDDIVCRYGGEEFVIIMPGAGLDAAQRRGDHLRR 548 Query: 449 RL------QHIAPQKEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNSR 495 + ++ + S G+ + D ++D LY KQ +R Sbjct: 549 CVSALDVEANVPAPIRLTVSLGLACYPQHGDNAEHLLHSADMALYEAKQGGRNR 602 >UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas RepID=Q2P4J7_XANOM Length = 569 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 7/186 (3%) Query: 317 LFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 L A L++ + RL +++ R++I DA+TGLYNR+ L L L + + G + Sbjct: 372 LEIAEAAAEQLSLALSNLRLRESLRRQSIRDALTGLYNRRYLEESLSHELARCARRGLPL 431 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 + +D+D KQ ND+ GH GDL + + + + +R D A R GG+EF ++L ++ Sbjct: 432 SVLMLDVDHFKQFNDSQGHAGGDLLLAAVGELLLTRLRTEDVACRYGGEEFTVLLPEADG 491 Query: 437 QIAAQLPERIEKRLQHIAPQ------KEIGFSSGIYAMK-ENDTLHDAYKASDERLYVNK 489 + A ++ E+I + +A ++ S G+ + + + + +D LY K Sbjct: 492 EEALRVAEQIRGYIAALAVSDEARALPKVTASIGVASFPADGEQGASLIQKADAALYRAK 551 Query: 490 QNKNSR 495 +R Sbjct: 552 HRGRNR 557 >UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384142 Length = 445 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 6/179 (3%) Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 + L V RL + ++R D++TG+ NR+ + + ++ + + + +D Sbjct: 262 FVALKEDVTETKRLQEELTRLASQDSLTGIANRRHFLERAHTEIIRAGRAKTPLAVLMLD 321 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K+IND GH GD A+ LA + ++R++D RLGG+EF I+ A + Sbjct: 322 VDHFKKINDEYGHAAGDAALKALADTCRSTLRETDLFGRLGGEEFGILFPGDDLNAATEA 381 Query: 443 PERIEKRLQHIAPQKE-----IGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ER+ + I S G+ +++ + ++ A +D+ LYV KQ +R Sbjct: 382 AERLRLAIAATKITIGGATIAITASLGLSLLQDGEKSIDAALSRADQALYVAKQAGRNR 440 >UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VL34_ALCBS Length = 487 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 18/274 (6%) Query: 240 INKNNLRNIFYTHDRPLLWRFLNVTLTDTDSG----RDIIINQSEDNLFQYVSYVHDLPG 295 +N+ + Y + L F +T D + ++ + + Y+H Sbjct: 208 VNQALCSILGYDEEALLASDFQTITHPDDLETDLHHVEEMLTGKRSSYWMKKRYIHKNGH 267 Query: 296 GIRVSLSIDILY-------FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDA 348 + V L++ ++ + S + + + L L L Q ++ +D Sbjct: 268 IVWVLLAVSLVRNGDGSPRYFLSQIEDITAQVTAELTLREKQGELEELNQELASMARTDP 327 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TGLYNR +L L Q + + + I +D+D KQ ND+ GH EGD A+ +A+A Sbjct: 328 LTGLYNRLVLMEGLRQEFSRCERRSEPMSVIFMDVDHFKQYNDSYGHVEGDAALQAVAEA 387 Query: 409 IKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI-APQKEIGFSSGIYA 467 ++ IR +D R GG+EF +L + Q A ++ ER + + I + + + S G+ Sbjct: 388 LRPVIRDTDVLARYGGEEFVALLPTANSQDAERVAERCRRAVAEISSLSRPVSLSVGVAT 447 Query: 468 MKEND------TLHDAYKASDERLYVNKQNKNSR 495 ++ D + A+D LYV K +R Sbjct: 448 LRFGDEADETKSPESLLSAADRALYVAKGAGRNR 481 >UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7X2_9GAMM Length = 365 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 2/167 (1%) Query: 331 RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIN 390 R + + +D +T L NR+ L LEQ ++ + + I +D+D K +N Sbjct: 192 LELKRANEKLEYLASTDPLTELVNRRRLDEVLEQEFERTSRYQGELSLILLDIDHFKAVN 251 Query: 391 DTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 DT GHQ GD I + KQ RKSD A R GG+EF I+ ++ A E++ + Sbjct: 252 DTRGHQVGDEVIAGVGNIAKQMSRKSDTAGRWGGEEFLIVAPQTSCDNAVAFAEKLRLSI 311 Query: 451 QHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ++ + S G+ +++ +T+ K +DE LY K N +R Sbjct: 312 ENTEFSSGVRVSASFGVASLETGETIQLVLKRADEALYRAKHNGRNR 358 >UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4USH9_XANC8 Length = 578 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 7/186 (3%) Query: 317 LFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 L A L++ + RL +++ R++I DA+TGLYNR+ L L L + + + Sbjct: 372 LEIAEAAAEQLSLALSNLRLRESLRRQSIRDALTGLYNRRYLEEALSHELARCARRDLPL 431 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 + +D+D KQ ND GH GDL + + + + +R D A R GG+EF +IL ++ Sbjct: 432 SVLMLDVDHFKQFNDGQGHAGGDLLLAAVGELLLTRLRAEDVACRYGGEEFTVILPETDG 491 Query: 437 QIAAQLPERIEKRLQHIAPQ------KEIGFSSGIYAMKENDTL-HDAYKASDERLYVNK 489 + A ++ E+I + +A + S G+ + + L + +D LYV K Sbjct: 492 EEAMRVAEQIRGHIAALAVSDGQRALPRVTASIGVASFPADGELGSALIQKADAALYVAK 551 Query: 490 QNKNSR 495 + +R Sbjct: 552 RQGRNR 557 >UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPG9_DESMR Length = 368 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 7/177 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + + L + + R SD +TGL NR+ + L + G+ + I +D+D Sbjct: 178 MTQDISARKALEEELLRLAASDPLTGLANRRGFFEGAARMLGMARRCGTPLSMIMLDIDH 237 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K +ND GH GD + +A +++S+R SD A R+GG+EF ++ + +L ER Sbjct: 238 FKAVNDAYGHDAGDAVLRAVAGRLRESLRVSDLAGRVGGEEFAVLCPGTDLAGGVELAER 297 Query: 446 IEKRLQHIAPQ-----KEIGFSSGIYAMKENDT--LHDAYKASDERLYVNKQNKNSR 495 + L+ + ++ S G+ +++ +D LY K+ +R Sbjct: 298 LRLALEDMVVTADCRAVKVTASFGVAQCRDDRDAAPSACLTRADRALYAAKRGGRNR 354 >UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=Q48MB2_PSE14 Length = 509 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 127/362 (35%), Gaps = 19/362 (5%) Query: 150 AEEKFHYYLDLN--DRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTG---RT 204 Y+ D + +W S + + + + Sbjct: 136 NFSDRSYFKDHKADPSLGLHVSAPYKSRWGYKDWCISFSRRMSGPNGEFTGMVSAAMRLV 195 Query: 205 VLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVT 264 ++ Q + + + + D+ +L Y+H Sbjct: 196 YFKHLFMSQNLG---VGSSINLINTAGILIVRYPDLEGEDLIGKDYSHSPNFQRILQEGD 252 Query: 265 LTDTDSGRDIIINQ----SEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWI 320 + + + S V + + + +++ L + Sbjct: 253 GSFAAMSTQLNARRLYTFSRVGNLPLVVVIGQSEDEVYAVWRRNAWLVGSATSVLCLGIL 312 Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 +L +R R ++ +D +TGL NR+ L +E + +SG + + Sbjct: 313 WLTWLLCRELRRRHRAEDALASLAATDGLTGLDNRRQLDEAMETEWARAQRSGKQLSLLM 372 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK-SDYAIRLGGDEFCIILVDSTPQIA 439 ID+D K N+ GHQ GD A+ L+AQ I +IR+ D R GG+EF ++L ++ A Sbjct: 373 IDVDHFKAFNERHGHQGGDEALRLIAQTISFNIRRPGDRVARYGGEEFVVVLPETELPGA 432 Query: 440 AQLPERIEKRLQHIAP----QKEIGFSSGIYA--MKENDTLHDAYKASDERLYVNKQNKN 493 + E+I K + + Q+ I S G+ + +++ D L + +D+ LY K Sbjct: 433 MMIAEKIRKAAESLPLFPDAQQPITVSIGVVSEMVRQGDKLEAFFGIADKALYQAKHKGR 492 Query: 494 SR 495 +R Sbjct: 493 NR 494 >UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NS82_9VIBR Length = 385 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 108/263 (41%), Gaps = 9/263 (3%) Query: 242 KNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSL 301 + + F+ + DI ++ +L ++L I Sbjct: 118 PSTNARVILMTVYVSSLCFIAILANQKGKSTDITPSKFLLSLGLATQGGYNLFRFIWTLF 177 Query: 302 SIDILYFITSSWKSVLFWILTALILLNM-----VRMHFRLYQNVSRENISDAMTGLYNRK 356 I F+ S L ++ T L+++ + + RL + +I D +T LYNR+ Sbjct: 178 EERIDDFMISGMAHQLAFVSTLLMVIFIGFSVTWMLTGRLVATIYDTSIKDELTQLYNRR 237 Query: 357 ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS 416 L L + + + + + + +D+D K++NDT GHQ GD + + + RK Sbjct: 238 ALEELLPKEIARSSRHKQPLSVLLLDIDHFKKVNDTYGHQAGDRVLRTTGKLLILQTRKD 297 Query: 417 DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK----EIGFSSGIYAMKEND 472 D + R GG+EF ++L ++ + A + E++ + ++ S G+ D Sbjct: 298 DLSFRYGGEEFLVLLPNTDVEKAVIVAEKLREAIKRARMLPTNVDSCTASFGVTQFNGED 357 Query: 473 TLHDAYKASDERLYVNKQNKNSR 495 A + +D+ LY K+N ++ Sbjct: 358 DWQTAIERADQALYSAKENGRNQ 380 >UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TF13_9BURK Length = 531 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 106/247 (42%), Gaps = 24/247 (9%) Query: 273 DIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWK------------SVLFWI 320 + D + + +Y H +PG + + + + W+ ++ Sbjct: 265 SYVSVSPVDGVRRIFTYAH-VPGTPLIVAIAPAVDDVLAPWQRRSHVAAALTIAFGAVFV 323 Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 + + +L +R R + R +D +TGL NR++L L+ + + + + Sbjct: 324 VVSWLLAFALRDKQRAQAALLRLASTDPLTGLSNRRVLDKRLDDEWMRARRDNRPLSVLF 383 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS-DYAIRLGGDEFCIILVDSTPQIA 439 ID+D K+ NDT GH+ GD + +A I R+S D R GG+EF ++L D+T Q A Sbjct: 384 IDIDHFKRFNDTYGHESGDEVLVAVADCIASVARRSVDLVARYGGEEFAVVLPDTTAQGA 443 Query: 440 AQLPERIEKRLQH------IAPQKEIGFSSGIYAMKEND----TLHDAYKASDERLYVNK 489 + E+I ++++ + + S G + + + A+D +LYV K Sbjct: 444 FAVAEQIRRKVESRVIVRGHEAPQAVTVSVGCATARPSTADFANGLELLAAADAQLYVAK 503 Query: 490 QNKNSRS 496 +R+ Sbjct: 504 NEGRNRT 510 >UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNC9_9BACT Length = 494 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 113/269 (42%), Gaps = 7/269 (2%) Query: 234 GIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDL 293 G LD + L+ FL VT + + + + V Sbjct: 222 GFFSLDFLPSPEYRELLWLQYSLILAFLAVTGGTVFFLLFFLRRRFDPYTRMVGALVDYS 281 Query: 294 PGGIRVSLSIDILYFITSSWKSVLFWILTAL----ILLNMVRMHFRLY-QNVSRENISDA 348 + +D++ I+S + +I AL ++L + + Y + D+ Sbjct: 282 ERKTDLDGLLDVMSEISSGASDEISYICEALKDMILVLKDKMENIQSYSDRLEYLANRDS 341 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TGL+NR+ + L ++ + GSS+ + +D+D K +ND GH+ GD ++ +A Sbjct: 342 LTGLWNRRKMDQILLSETERSSRYGSSLSVVMVDIDHFKNVNDNFGHEVGDTVLSSIAAL 401 Query: 409 IKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP--QKEIGFSSGIY 466 +K R D R GG+EF ++L ++ + A + ER+ ++ I S G+ Sbjct: 402 MKNCTRAGDSVGRWGGEEFLVVLPETDVKGALEYAERMRSAVEDNVFHDDIRITSSFGVT 461 Query: 467 AMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + +++ +DE LY K+ +R Sbjct: 462 QYRSGEPVNEFVARADEALYDAKEKGRNR 490 >UniRef50_Q2T680 GGDEF domain protein n=32 Tax=Burkholderia RepID=Q2T680_BURTA Length = 506 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 109/263 (41%), Gaps = 12/263 (4%) Query: 244 NLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSI 303 +L + D + + + D + V V I + + Sbjct: 238 DLSGTSLYSRMQFGRSGEFFDVEPIDHMKRFYLYRRLDGV-PLVVQVAIADDDIYATWRV 296 Query: 304 DILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELE 363 F + L +++ + L + + ++R +D++TGL+NR+ L LE Sbjct: 297 RAWRFGVVTGVFALIFVVMSAYLAHSLWRKSTAEAALARLAGTDSLTGLHNRRALDETLE 356 Query: 364 QRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAI-KQSIRKSDYAIRL 422 + ++ V + + +D+D K+ NDT GHQ GD + +++ I +Q+ R D R Sbjct: 357 REWRRAVGGERPLAILFVDIDHFKRYNDTYGHQVGDEVLATVSRCIAQQAARLGDVVARY 416 Query: 423 GGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE------IGFSSGIYAMKEND---- 472 GG+EF ++L D+ A + ER+ ++ + + E + S G+ + + Sbjct: 417 GGEEFVVVLPDTPRGGALVVAERVRLGVRMLGIEHEGSEVGFVTVSVGVAVWQPDGARAP 476 Query: 473 TLHDAYKASDERLYVNKQNKNSR 495 + +A+D+ LY K +R Sbjct: 477 HIAAIVEAADQALYQAKAAGRNR 499 >UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA43_HYDS0 Length = 610 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 145/358 (40%), Gaps = 26/358 (7%) Query: 141 DDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVF 200 + S + + Y + +Y + + + + ++ +++K Sbjct: 272 ESLSSYIIHILKNGDTYGSIR---LYSKKENYFDEYQEILLNLKDKIEHTLNTIELKKKL 328 Query: 201 TGRT-VLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWR 259 + ++ SI Q+ + V + Y ++ D ++ IF + Sbjct: 329 DYQNKLVKSIIQNTKIGVLVFDMDGVYYANDYFFELLGYDFDELKALTIFD------ILS 382 Query: 260 FLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFW 319 ++V + I E ++F+ + + + G + + + Sbjct: 383 PIHVKDLIDAFANKMPILSQEFHVFKKDNKILFVKGTLDFIRNPENKD------------ 430 Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 A+ + L + + +++I D +TG+YNR+ L +LE+ + + + I Sbjct: 431 --NAVFTFVDITKEKELSELLLKQSIEDTLTGIYNRRYLKDKLERHVNLAKRYERPLSVI 488 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 D+D K INDT GH GD + +++ + ++IR +D R GG+EF I+ ++T + A Sbjct: 489 MFDIDFFKHINDTFGHDVGDKVLIAISKVVSENIRNTDIFARYGGEEFIIVAPETTKEDA 548 Query: 440 AQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 L E++ ++++ + + S G+ ++++ DT K D LY K+ +R Sbjct: 549 KILAEKLRSLIRNLHFEEGINVTCSFGVVSLEKPDTKETLLKRVDNALYEAKRTGRNR 606 >UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8W1_MAGSM Length = 564 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 3/201 (1%) Query: 298 RVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKI 357 V +L S K + + L+ V RL Q + + +D +T L NR+ Sbjct: 352 TVVYKQRVLNLYVRSIKDDHGEPIGSAALILDVTDEKRLEQQLRELSTTDGLTKLINRRR 411 Query: 358 LTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSD 417 + L++ L++ V+ G ++ + +D+D K+ NDT GH++GD + LA +K R D Sbjct: 412 MDELLDEELKRAVRYGLNLSILLLDVDHFKKFNDTYGHEQGDHVLIALAAEMKSYFRNID 471 Query: 418 YAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-KEIGFSSGIYAMKE--NDTL 474 Y R GG+EF +IL ++ A ++ +R+ +R+ + S G+ + + Sbjct: 472 YPCRYGGEEFFVILPNTDADGAIKVADRLRERVAEKEVDGLRVTISIGVASYPDLSITRP 531 Query: 475 HDAYKASDERLYVNKQNKNSR 495 +A+D LYV K+ ++ Sbjct: 532 DAMVRAADSALYVAKEQGRNK 552 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 7/210 (3%) Query: 288 SYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISD 347 ++++ G I S ++ I + + V Q + SD Sbjct: 244 TFINKRKDGSLFYAEHSI-----SPLCNLEGTITHYVSISQDVTTRLGREQKLLEIAHSD 298 Query: 348 AMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQ 407 +TGL NR+ LE+ + SG I D+D K +ND GH GD +T +A Sbjct: 299 PLTGLNNRRAAEHTLERLIDTARISGKPFSLIIGDIDHFKSVNDRYGHPAGDRVLTSVAV 358 Query: 408 AIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI--APQKEIGFSSGI 465 +KQ IR D A R GG+EF I++ DS+ AA+L +RI K ++ + + S G+ Sbjct: 359 ILKQRIRLQDVAARWGGEEFLILVPDSSLDHAAELADRIRKGVEDLLIPNTGSVTISLGV 418 Query: 466 YAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + +T + +D+ LY K+ +R Sbjct: 419 AQLSPGETAASLIQRADKALYQAKRRGRNR 448 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 12/207 (5%) Query: 301 LSIDILYFITSSWKSVLFWILTALILL-----NMVRMHFRLYQNVSRENISDAMTGLYNR 355 + F+ + W S L + +++ + L +S D +TGLYNR Sbjct: 178 YEVPPEDFMNAGWLSALAIVAGEFLVILSSFCTIWMASDELQDELSEIARIDPLTGLYNR 237 Query: 356 KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK 415 + + + +SG+ I D+D K++ND GH GD + A +K+ IRK Sbjct: 238 RAFDECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGHHVGDEVLRRFANTLKEHIRK 297 Query: 416 SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK------EIGFSSGIYAMK 469 D R GG+EF ++L + ++ E++ + + S G+ Sbjct: 298 HDVVARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQITIGDDVCLTLSASFGVAHYD 357 Query: 470 ENDTLHDA-YKASDERLYVNKQNKNSR 495 +D A +D LY K+ +R Sbjct: 358 SSDREWSAVLHRADNALYAAKKQGRNR 384 >UniRef50_B6BHU8 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHU8_9PROT Length = 588 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 138/377 (36%), Gaps = 11/377 (2%) Query: 127 LPAFDQAVEGNRHQDD---YGSGLGMAEEKFHYYLDLNDR------YVYFYEPVNVEYFA 177 A +A + + + + + + +L ++ Y ++ ++ Sbjct: 209 FDAPHEARDYLKENGIEKYFNNSYKIENGQIIASYELKNKDENPVGYYIMFKKIDTISNM 268 Query: 178 MNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVL 237 ++ + ++GI + + + + ++ N+++ T + + K L Sbjct: 269 DLDFFMFKWLTLGIIVIMSIAIIVSTMLFFANRRQKKYFHNIINSATNIVLINNRK--TL 326 Query: 238 LDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGI 297 LD+N + + I + + + Sbjct: 327 LDVNMIFFKYFDRYKTLEEFKKDNECICDFFVEEEGCIKADMDGVKWVDYLVENHSKVHK 386 Query: 298 RVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKI 357 +Y+ + S VL I+L + + + +++DA+TG+ NR+ Sbjct: 387 IKIDIFGKVYYFSVSASKVLKEKNYYSIVLTDITEQENYKKELEHLSVTDALTGIGNRRY 446 Query: 358 LTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSD 417 ++E+ + + + + I D+D K +ND GH GD + + I +R+ D Sbjct: 447 FHQKIEEEIHRAKRYQHPLSLIMFDIDFFKHVNDKHGHSVGDEVLIEYTKLINSLLREGD 506 Query: 418 YAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDA 477 R+GG+EF IIL + A ++ E++ +++ I S G+ + + Sbjct: 507 VFCRIGGEEFIIILPHALRDEAQKIAEKLRAKIEFCQKVIPITMSFGVVEYIVGEEIEFI 566 Query: 478 YKASDERLYVNKQNKNS 494 +K D+ LY K++ + Sbjct: 567 FKRVDDALYKAKESGRN 583 >UniRef50_C4XRL8 GGDEF domain protein n=2 Tax=Desulfovibrio RepID=C4XRL8_DESMR Length = 434 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 2/174 (1%) Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 L++L V + + D +T NR+ L LE + + + +D+ Sbjct: 249 LLMLADVTELELERRELLDLANRDPLTRTLNRRKLGDVLEAETARAARYATPFSLALLDI 308 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 D K IND+ GH GD + LA+ I S+R+ D R GG+EF + AA+L Sbjct: 309 DHFKHINDSHGHDAGDAVLVELARRITASLRQVDRLARFGGEEFVVAAPGIDLAGAAELA 368 Query: 444 ERIEKRLQHIAP--QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ER+ + + + S G+ A + D D K +D LY K +R Sbjct: 369 ERLRRAVADEPFAGVGRVTASFGLAAWRPGDKPEDLIKRADAALYRAKDGGRNR 422 >UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D095_MYXXD Length = 347 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 12/180 (6%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 + + + +DA+TGL NR+ L + + G+ + + +D+D K Sbjct: 162 RANKELAARREELLALTRTDALTGLSNRRAFEERLNDEFARSRRYGAPLSLVMLDIDHFK 221 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 +IND+ GH GD + +AQ + +R+ D R GG+EF +L ++ P A ++ ER+ Sbjct: 222 RINDSFGHPFGDHVLKAVAQTARARLREVDLLARYGGEEFIALLPETGPADALRVCERVR 281 Query: 448 KRLQHIAPQK----------EIGFSSGIYAMKEND--TLHDAYKASDERLYVNKQNKNSR 495 + + + + S G+ + D + +A+D LY K +R Sbjct: 282 DAIAALELEHVGGSGKPQCVRLTASLGVATVPSGDLPSAEALLRAADASLYAAKGAGRNR 341 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 5/184 (2%) Query: 317 LFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 +F L + R+ L Q ++ +D +TGL NR+ L LE + ++G + Sbjct: 176 IFAGLAEYTRRHTQRLLILLTQQLAESARTDELTGLANRRALCERLEYEQVRARRTGRPL 235 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 D+D K +ND GHQ GDL + +A + ++R D R GG+EF ++L ++ Sbjct: 236 SIAICDIDHFKSVNDCYGHQCGDLVLQSVAGLLHDNLRHQDTICRWGGEEFLLLLPETDE 295 Query: 437 QIAAQLPERIEKRLQH-----IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQN 491 AA+L E++ ++ + S G++ + + +D++LY+ K+ Sbjct: 296 AGAARLAEKLRSLVEAMEYSYHGIPVSVTLSFGVHTCGPEGDIDYHIRKADQKLYLAKEQ 355 Query: 492 KNSR 495 +R Sbjct: 356 GRNR 359 >UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSI3_ACIC1 Length = 517 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 1/189 (0%) Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQ 367 F + + V+ + + + L + ++ +D +TG+ NR+ L L++ Sbjct: 311 FGSRVDRRVVAMLERYASQTALALANSWLLEQITLLAATDMLTGVANRRTLEENLDRMFA 370 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 + ++ + + +D+D K INDT GHQ GD + +A+A++Q R SD R GG+EF Sbjct: 371 QASRAAQPISVVMVDIDHFKHINDTFGHQVGDQTLQRVARALQQGCRSSDLVARYGGEEF 430 Query: 428 CIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMK-ENDTLHDAYKASDERLY 486 ++L D+ AA E + +R+ + + + S G+ + A+D LY Sbjct: 431 VVVLPDTDLAGAATAAENLRRRIFGLDAEPRVTVSLGVATFPLHGGSPDHILSAADAALY 490 Query: 487 VNKQNKNSR 495 +K +R Sbjct: 491 QSKSAGRNR 499 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 16/284 (5%) Query: 228 VAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIIN---------Q 278 ++ + +N R I + + R + TL D I + Sbjct: 328 FFFEVFDTSTEIVYVSNQRRILFANKRFFEFFNEFETLEDFHEKYHCICELFMPEEGFLR 387 Query: 279 SEDNLFQYVSYVHDLPGGIRVS----LSIDILYFITSSWKSVLFWILTALILLNMVRMHF 334 N + ++V + + ++ + ++ S + +L+ + Sbjct: 388 RHINGVYWFNHVIQNKHEPHYAKVQLNGKEYIFLVKATEISNAYGDQYVSVLMTDITEEE 447 Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 + I D +TG+YNR LEQ +++ + S +D+D K INDT G Sbjct: 448 HYKSQLEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFSMAFMDIDHFKMINDTYG 507 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GD + LA+ I +R +D R+GG+EF I++ +++ + A + ERI ++ I+ Sbjct: 508 HDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPETSLENALIISERIRSTVEGIS 567 Query: 455 ---PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ++I S G+ + D + YK +DE LY K+N +R Sbjct: 568 SKDVPEKITISMGLVELNSWDNVQSFYKRADEALYKAKENGRNR 611 >UniRef50_Q21PN7 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21PN7_SACD2 Length = 565 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 6/171 (3%) Query: 331 RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIN 390 + +L + + D +T L NR+ L + + G + D+D K+IN Sbjct: 392 KSRAQLEEQ-RYKATHDPLTSLPNREAYNERAFHELHRFKRYGHPLTLAVCDLDHFKKIN 450 Query: 391 DTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 DT GHQ GD + L+AQ + +R D+ R GG+EF +++ ++ + A + +++ + Sbjct: 451 DTFGHQAGDKVLKLVAQVVSTRLRNVDFVARYGGEEFVLVMPETDAEQAKTVLDKMRAAI 510 Query: 451 QHIAPQKE-----IGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS 496 + + I S GI + D++ A+ +D+ LY K N ++ Sbjct: 511 AKTPFRFKDSPVTITMSFGIVQFRGEDSVESAFARADKALYEAKANGRNQC 561 >UniRef50_B1Y766 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y766_LEPCP Length = 381 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 97/213 (45%), Gaps = 9/213 (4%) Query: 292 DLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNV---SRENISDA 348 +P ++ ++ + + K + + + + H RL + + D Sbjct: 160 TIPADTAAQQALSGMFLLWTLVKGASINLAGMALRMELNDSHERLAAALLRVEQLAERDE 219 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TGL NR+ + L + ++ ++G S +D+D K+IND GH GD + +AQ Sbjct: 220 LTGLPNRRRMQAALAEERERCSRNGVSFSVAMLDIDHFKRINDLYGHPMGDAVLRSVAQL 279 Query: 409 IKQSIRKSDYAIRLGGDEFCIILVD-STPQIAAQLPERIEKRLQ-----HIAPQKEIGFS 462 ++ ++RK D R+GG+EF +IL + + A + ER+ ++ ++ S Sbjct: 280 MRTALRKPDLVGRVGGEEFLMILPGAARLEEAKHVVERVRAAIEGNDWSATRADLQVTAS 339 Query: 463 SGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 G+ + +++ + +D LY+ KQ ++ Sbjct: 340 IGVAVGEPGESVESLFDRADRGLYLAKQGGRNQ 372 >UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0Y0_9NEIS Length = 528 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 12/202 (5%) Query: 306 LYFITSSWKSVLFWILTALILL------NMVRMHFRLYQNVSRENISDAMTGLYNRKILT 359 Y++ + + + + + +V ++ +D +TGL NR+ L Sbjct: 310 FYWVFALIAAFVGFFGYRMFTYWLDSSTRLVNELAEANSKLAHLARTDTLTGLPNRRALE 369 Query: 360 PELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYA 419 LEQ+LQ+ ++G + +D+D K +ND GH GD I L +A+ ++IR D A Sbjct: 370 EALEQQLQRSRRNGEQASLVLLDIDHFKVVNDRYGHDAGDAVIRALGKAMSETIRNVDVA 429 Query: 420 IRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ-----HIAPQKEIGFSSGIYAMKENDTL 474 R GG+EF ++L + + AA ER+ R++ H S G+ + Sbjct: 430 GRWGGEEFLVVLANVDEEGAAAFAERLRTRVESSTVAHGELHVRYTISLGVAPLSTPHR- 488 Query: 475 HDAYKASDERLYVNKQNKNSRS 496 K +DE LY K + +R+ Sbjct: 489 EAWLKRADEALYRAKLDGRNRT 510 >UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSY0_9GAMM Length = 261 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 6/206 (2%) Query: 297 IRVSLSIDILYFITSSWKSVLFWILTALI--LLNMVRMHFRLYQNVSRENISDAMTGLYN 354 + + + F + + F++ T L+ L+ R+ + + DA+TGLYN Sbjct: 36 LGFPIGGKVWNFAVPAALIIPFFVGTPLVHNLIKSNIKLLRVQKQLEELANKDALTGLYN 95 Query: 355 RKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIR 414 R+ + ++ ++ + +D+D K IND GH GD + ++ IK +R Sbjct: 96 RQYFFDHANEWDKRCRENSGHFSLLMLDVDHFKSINDRFGHPVGDRVLQRVSNVIKGFMR 155 Query: 415 KSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP----QKEIGFSSGIYAMKE 470 + D R GG+EF +L D+ A + ERI ++H A + S G M Sbjct: 156 QEDMCARYGGEEFICLLPDTNAAGAKAVAERIRLGMEHQAFLKARGLSLSVSIGATTMSA 215 Query: 471 NDTLHDAYKASDERLYVNKQNKNSRS 496 ND L + +D+ LY K +R+ Sbjct: 216 NDNLETLIERADQALYEAKDGGRNRA 241 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 14/283 (4%) Query: 226 VYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQ 285 VY I+ D + L + R L L ++G + S + + Sbjct: 34 VYTMQHDDIIISPDYPNDALYVLLEGQARVHLGGIQTEPLLILETGS-CVGELSIIDQGR 92 Query: 286 YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILL-----NMVRMHFRLYQNV 340 +YV +S+ ++ + S ++ +L L ++ + + Sbjct: 93 ASAYVLAEGATKLLSIDESRVWSLIHSSHTLACNLLNILSKRMRNNNRVIIEGSERQRKL 152 Query: 341 SRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDL 400 D +TG+YNR+ ++++++++ S + + I +D+D K+ NDT GHQ GD Sbjct: 153 ETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFKRYNDTHGHQGGDE 212 Query: 401 AITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ---- 456 A+ LA I +R D A R GG+EF ++L D+ + ER+ ++ + + Sbjct: 213 ALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLRTAVEALEIKDDEG 272 Query: 457 ---KEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 I S G+ D++ + +D LY K +R Sbjct: 273 NSLSGITISLGVAQTSGTVDSVSELIATADAALYQAKNQGRNR 315 >UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UB95_XANAL Length = 595 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 12/234 (5%) Query: 269 DSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLN 328 D+I + ++ V + + LS L + L + L Sbjct: 348 AQTSDVICDPAQALYGACVPMIVQGERLGMIHLSSPNLAVLER-----LNLVEVVAEQLA 402 Query: 329 MVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQ 388 M + L + ++I D +TGLYNR+ L L + L + + + + +D+D K Sbjct: 403 MALHNLHLRHRLRTQSIRDPLTGLYNRRYLEESLLRELSRCARRDLPLALMMLDLDHFKA 462 Query: 389 INDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 +ND GH GD + Q + +R D A R GG+EF +IL + +A + E+I Sbjct: 463 LNDRFGHAGGDALLAAFGQLLGGLVRPEDIACRYGGEEFTVILPGAAADVAQRRAEQIRA 522 Query: 449 RLQHIAPQKE------IGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ++ + Q I S G+ A E+ T + + +D LY K++ +R Sbjct: 523 AVEQMQVQHHGQMLPSITVSIGVAAYPEHGSTGEELLRCADAALYCGKRSGRNR 576 >UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEH9_DESAH Length = 341 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 111/272 (40%), Gaps = 5/272 (1%) Query: 226 VYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQ 285 V ++ + V D ++ F + +L ++T + + Sbjct: 63 VVISDYIMPGVKGDQLLVDIHKKFPKAKKIMLTGQSDITGVKKAINKAHL---YRFLEKP 119 Query: 286 YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENI 345 +++ L ++ + + + ++ R + + + + I Sbjct: 120 WINDDMLLTIRGAITAYEQETLLDRQNRELIQLNQALEQKVMERTRELEKKNRELEQIAI 179 Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 D +TGL+NR+ L L + L + + G+S I +D+D K +NDT GHQ GD + Sbjct: 180 IDQLTGLFNRRKLDEMLSRELIRSRRYGNSFGLIMVDIDFFKTVNDTHGHQIGDQVLQRF 239 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSS 463 A +KQ +R+ D R GG+EF II ++ L E++ +Q IA E S Sbjct: 240 ADQLKQGVREVDVLGRWGGEEFLIICPETIKDYLILLAEKLRIAVQSIAVPGVGEKTASF 299 Query: 464 GIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 G+ ++ D L D+ LY+ K+ +R Sbjct: 300 GVTVYEKGDNLDTLVDKVDKALYLAKEKGRNR 331 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 8/176 (4%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 + L + + + +D +TGL NR+ E L + + G+ + +D+D K Sbjct: 433 RDITDRKELERELESQARTDVLTGLNNRRYFFELAELELARAKRHGNQFSLLMLDVDHFK 492 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 ND+ GH GD + L++ ++R+ D + R+GG+EF I+L ++ A ++ ER+ Sbjct: 493 LFNDSYGHHIGDRVLQKLSEVCMHTLREIDLSGRIGGEEFAIMLPETRGDRAMEVAERLR 552 Query: 448 KRLQHIAPQK-------EIGFSSGIYAM-KENDTLHDAYKASDERLYVNKQNKNSR 495 + S G+ ++ + D K +D+ LY K ++ Sbjct: 553 LAIAGAPVLLEQQSTFVHFTVSIGVTSLVAAGRQVDDLLKRADDALYAAKNAGRNQ 608 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 12/195 (6%) Query: 314 KSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSG 373 S+ + +++ + R + Y+ + +I+D +T L+NR+ L + + + ++ G Sbjct: 217 ISLSLLSMIWILVSRLARRLTKAYETIEVMSITDELTRLHNRRHFETRLAEEISRSLRYG 276 Query: 374 SSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD 433 S + + +D+D K++ND GHQ GD +T A +K ++RK+D R GG+EF +IL + Sbjct: 277 SPMSLMILDIDHFKRVNDNYGHQAGDWVLTQFATLLKDNVRKADVPARWGGEEFVVILTE 336 Query: 434 STPQIAAQLPERIEKRLQHIAPQ------KEIGFSSGIYAMK------ENDTLHDAYKAS 481 ST A E++ + ++ + S G+ ++ K + Sbjct: 337 STISQARMAAEKVRRNVESAEFNIPDGRSIPVTVSVGVASLDMISGDEMGSEADVLVKTA 396 Query: 482 DERLYVNKQNKNSRS 496 D+ LY KQ +R+ Sbjct: 397 DDALYRAKQEGRNRT 411 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 7/186 (3%) Query: 317 LFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 L T + + + L + + ++I D +TGLYNR+ L L Q + + + + Sbjct: 1423 LQIARTVAEQVALAIANLNLRETLQYQSIRDPLTGLYNRRYLEEVLTQEIARGQRRQHPI 1482 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 + ID+D K+ NDT GH GD + + +K+++R SD A R GG+E +IL +S+ Sbjct: 1483 SVVMIDVDYFKRFNDTYGHDVGDYVLQTIGAMLKETVRGSDIACRYGGEEMTLILPESSL 1542 Query: 437 QIAAQLPERIEKRLQHI------APQKEIGFSSGIYAMKENDTLH-DAYKASDERLYVNK 489 + E I + + + ++ S GI ++ T +A+D LY K Sbjct: 1543 EETTIKAEEIREAIAQLTLAYNGQHLGKLTISLGIAGFPKHGTTGIALIQAADAALYRAK 1602 Query: 490 QNKNSR 495 ++ Sbjct: 1603 AAGRNQ 1608 >UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D632_MYXXD Length = 710 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 107/279 (38%), Gaps = 12/279 (4%) Query: 224 TPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNL 283 + V GQ + N + N+ + I + Sbjct: 419 SGVTAQGQALSGQSFEDNNGLVANVVRYGAPLPGRDIKAMDRQIIFDDETQIRGLGALKI 478 Query: 284 FQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRE 343 F V D G V+ S F + + + A + +LY+ + R Sbjct: 479 FPLV--AGDRILGTLVAGSRKKAAFEQDVLRMIEVIAIQA----AQAVLRAQLYEQMERM 532 Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 +D +TGLYN + + ++ L + + I D+D K +NDT GH GD + Sbjct: 533 ATTDGLTGLYNHRTFQAKADEVLAQSRRYQRKFSLILTDVDHFKSVNDTYGHPTGDQVLK 592 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-----KE 458 +A+ IK R +D R GG+EF II+ ++ + A + ERI + ++ Q Sbjct: 593 GVARIIKTMARDTDIVARYGGEEFVIIMPETDAKGAFTISERIREAVKAEVFQTEMGPLR 652 Query: 459 IGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSRS 496 I S GI ++ +D+ LY +K+N ++S Sbjct: 653 ITMSLGIATFPDSAMEKQQLIDLADQCLYHSKRNGRNQS 691 >UniRef50_A0LBU1 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LBU1_MAGSM Length = 438 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 121/339 (35%), Gaps = 8/339 (2%) Query: 165 VYFYEPVNVEYFAMNNWSFLQSGSIGI--DRKDIEKVFTGRTVLSSIYQDQRTKQNVMSL 222 + N E F + S I + + T I ++ + Q + + Sbjct: 88 IMVTTAYNDERFFLKAISIGIDEFILKPTQPDLLSQAIAKLTKHIEIKRESQRHQQFVEM 147 Query: 223 ---LTPVYVAGQLKGIV-LLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQ 278 P ++ + + + + + + + + + + Sbjct: 148 LLESLPAFILVVNDSEIEHANSPFLHFLGLSHMEQLDPKGSDIIQAICIQPNDALSHLLE 207 Query: 279 SEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQ 338 D L + LP S + S + + + R Sbjct: 208 RGDWLSYMTQRCNILPTIQLQEPSKSRDPITCAISWSFDATAGRQVFAFTDLYLIQRKIN 267 Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 ++ ++ D +TG NR L + + +++ + GS V + +D+D K++NDT GH G Sbjct: 268 DLEKKVYHDPLTGAANRSRLYEKFHEEMKRSERYGSPVSILMLDIDHFKRVNDTYGHNAG 327 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-- 456 D + + + ++ +R +D R GG+EF +I ++ A ++ E I + + I Sbjct: 328 DEVLLEVVKRMQGHVRVTDLVGRWGGEEFLLIAPETVLGAALEVAENIRRLIGQIPFGQV 387 Query: 457 KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S G+ + + ++++ + D LY K+ R Sbjct: 388 GRVTCSIGVGQLAKGESMNTCLERVDAALYRAKKQGRDR 426 >UniRef50_C9E5K7 Pas/pac/ggdef-domain containing protein n=3 Tax=Vibrio RepID=C9E5K7_VIBCH Length = 423 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 137/340 (40%), Gaps = 26/340 (7%) Query: 174 EYFAMNNWSFLQSGSIG---IDRKDIEKVFTGRTVLSSIYQDQ-----------RTKQNV 219 EYF ++ + GS + + T S+ QD Q + Sbjct: 80 EYFEGMTTNYRKDGSPYLVRWNISPVRDEVGDITHFVSVQQDMTAYAKVEDTSKILGQAL 139 Query: 220 MSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPL--LWRFLNVTLTDTDSGRDIIIN 277 + P+ V I+ +N++ ++ Y + L D D +++ + Sbjct: 140 DAAAEPILVTDAHAKIIF--VNQSFIQVSGYEESELIGNTPTLFKSGLHDDDFYKNVKAS 197 Query: 278 QSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLY 337 FQ + +++ G I S+ K I + + V R Sbjct: 198 LMTKKTFQAI-FINKRKDGTLYHSEQSI-----SAIKDQAGNITNYVSVGKDVTERLREE 251 Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 Q + D +TGL+NR L + + + I D+D KQIND+ GH Sbjct: 252 QALRESATVDQLTGLFNRNHGKALLSEAYSFTLSREEPMSLILCDIDHFKQINDSFGHPV 311 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ- 456 GD + ++ +++S+R +D IR GG+EF I+L + T +AA+L ER+ R+ Q Sbjct: 312 GDQILAQVSGLLRKSVRGNDRVIRWGGEEFLILLENCTDMVAAELAERLRLRIASEQFQS 371 Query: 457 -KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 ++ S G+ ++ + ++L DE LY +K+N ++ Sbjct: 372 VGKVTVSLGVASLFQKESLEQLISRCDEALYKSKRNGRNQ 411 >UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW5_9GAMM Length = 274 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 2/167 (1%) Query: 331 RMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIN 390 R + R+ D +TG+ NR L + L + + G+ + D+D K++N Sbjct: 97 LELQRANAELKRQAYYDRLTGVANRHYFETLLNRELARADRYGAPFALVMFDLDHFKRVN 156 Query: 391 DTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRL 450 DT GH GD+ + + + I + +R +D R GG+EF ++L + AA++ E + R+ Sbjct: 157 DTFGHAAGDVVLQEVTRVIAERLRDADVLGRWGGEEFMVLLPGTQEADAARVAETMRARV 216 Query: 451 QHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + S G+ A + + DE LY K +R Sbjct: 217 EGHDFPEAGRVTISLGVAAFCAGEPRTGLLRRVDEALYRAKGEGRNR 263 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 98/265 (36%), Gaps = 17/265 (6%) Query: 237 LLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGG 296 ++D N + + + R +V + + + + Sbjct: 261 IVDANPAACQFLQSDVAGLIGMRARDVFAPWYATLVVMEPGSGSVEIRLPYGFK------ 314 Query: 297 IRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRK 356 + L S + + L+L+ V + + +D +TGLYNR+ Sbjct: 315 -----EMSWLEIERSEIRDARGRLWGQLVLMRDVSERKEAESRLLQMAATDELTGLYNRR 369 Query: 357 ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS 416 + + S + + +D+D K+IND GH GD A+ + I +R Sbjct: 370 RFFELARGEFNRAKRYSSPMTILLLDIDYFKRINDEYGHDAGDTALRCIVSMIASQLRSL 429 Query: 417 DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-----KEIGFSSGIYAMKEN 471 D RLGG+EF +L ++ A ++ ERI ++ A + S G+ + Sbjct: 430 DVLARLGGEEFVALLPETHQFDAERIAERIRSEIESTAINLFETTLFVTVSIGVAGYSKE 489 Query: 472 D-TLHDAYKASDERLYVNKQNKNSR 495 + + +DE +Y K++ ++ Sbjct: 490 MQDVGELINRADEAMYRAKRDGRNQ 514 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 7/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 ++ + +L + D++TG+ NR+ + L + L++ + + + ID D Sbjct: 216 IILDISDRKQLENELEALATRDSLTGVLNRRECSRVLIEELERARRYNRPLALLWIDFDH 275 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K+INDT GH GD + ++ ++ S+R D R GG+EF +IL + A + ER Sbjct: 276 FKEINDTWGHAAGDSVLCSISSLLEDSVRSVDTLGRFGGEEFVLILPEMDVAEAEETAER 335 Query: 446 IEKRLQHIA------PQKEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNS 494 + +R+ + + S G+ + DTL A+D+ +Y K+ + Sbjct: 336 LRQRVCNQPVALESGHNIRLTISIGVAVFPDHGDTLDALCAAADKAMYRAKKQGRN 391 >UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NY46_9DELT Length = 525 Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 20/253 (7%) Query: 261 LNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWI 320 + + + + ++ NQ + V P G +S + D F+ + K + + Sbjct: 270 QQLPDEHSFTWKVMVGNQPWAVNLLRIHDVEQRPVGYLISYAPDN--FLVALRKEFIVSL 327 Query: 321 LTALILLNMVR----MHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 L A +L + + R + R +D +TGL NR+ L ++ + G+ V Sbjct: 328 LVAWLLAAGLGLLFVLLARSRDEMVRLATTDPLTGLANRRSFMDRLGLEQERFKRFGNPV 387 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 + +D+D K++NDT GH GD + A ++Q++R D RLGG+EF ++L + Sbjct: 388 GLLMLDIDFFKKVNDTHGHHVGDEVLGQFATLMRQNLRHVDLVGRLGGEEFAVVLPGADL 447 Query: 437 QIAAQLPERIE-------------KRLQHIAPQKEIGFSSGIYAMKENDT-LHDAYKASD 482 + R+ R A I S G+ ++ D + + +D Sbjct: 448 EGTLHFANRLRCGVGERLQGEVCGHRFSTSAGILNITVSIGVAVLQPGDDGVEPVLRRAD 507 Query: 483 ERLYVNKQNKNSR 495 LY K+N +R Sbjct: 508 TALYRAKENGRNR 520 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 5/173 (2%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 ++ + + D++TGL NR+ +E+ L + +S + + +D+D+ K Sbjct: 275 RFLKELREAQEKLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRFK 334 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 +INDT GHQ GD ++ +++ +RK D R GG+EF ++L D++P A E+I Sbjct: 335 KINDTYGHQAGDAVLSEFGATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIR 394 Query: 448 KRLQHIAP-----QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 Q + S GI M+ ++T +D LY K + +R Sbjct: 395 AVTAATPIMFAGRQIAVTTSIGISMMQGDETAKAMIARADAALYEAKNSGRNR 447 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 12/234 (5%) Query: 270 SGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNM 329 GR+ I S+ + V GI S V L L Sbjct: 261 DGRERIFGLSKLENIPLILMVGYDLAGILTEWSKRAGQLAAGFLLLVALATLG----LRS 316 Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 R + + R+ +D +TG+ NR+ L E L + ++ G ++ +D+D K I Sbjct: 317 YLTTVRQREELRRQADTDPLTGVPNRRHLMSVAEHELARTLRYGGALALFMVDIDHFKAI 376 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 NDT GH GD I +LA A+ S R+ D A RLGG+EF +L ++ + AA + ER+ + Sbjct: 377 NDTWGHPTGDRVIQVLAAAMAASAREQDTAGRLGGEEFAAVLPETDLEGAAIMAERLREA 436 Query: 450 LQHI-------APQKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 ++ I S G+ A++ D ++ D +D LY K +R Sbjct: 437 VEAITSALDDQGQPVRFTVSIGVAAIQLGDGSVEDILGRADRALYAAKHGGRNR 490 >UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=Deltaproteobacteria RepID=Q1NJD1_9DELT Length = 469 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 13/203 (6%) Query: 307 YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVS-------RENISDAMTGLYNRKILT 359 + + + +K +L + + + Q + +I D +TGL+N++ Sbjct: 264 HVLATPFKGPAGDLLGIVEHITDITSRVLAEQALQKSEQRYKELSIVDELTGLFNKRYFN 323 Query: 360 PELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYA 419 L +++ + + + +D+D K NDT GH GD ++ L ++ S+R +D A Sbjct: 324 KHLRLEVERARRYQHPLSLLIMDIDNFKHYNDTYGHPAGDRVLSALGGMLRDSMRLNDLA 383 Query: 420 IRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ------KEIGFSSGIYAMKENDT 473 R GG+EF +IL + + +L ER+ +R + Q S G+ ++ ++ Sbjct: 384 CRFGGEEFVVILPMTDGETGLKLAERLRERFAALEFQPLEGVVIRKTMSVGVAQFEDEES 443 Query: 474 LHDAYKASDERLYVNKQNKNSRS 496 +D+ LY K RS Sbjct: 444 PESLLARADKNLYAAKAAGRDRS 466 >UniRef50_B6IWW6 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWW6_RHOCS Length = 383 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 6/194 (3%) Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQ 367 + + + AL L R F L + E D +TGL NR+ L + + ++ Sbjct: 161 VLAHFGTGLFTAYVVALALERAARQSFALELRLEEEARIDPLTGLANRRRLEEQADLEVE 220 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 + + G + + +D+D K++ND GH GD ++ LA ++++R++D R GGDEF Sbjct: 221 RARRFGRPLSVLMLDLDHFKRVNDEHGHARGDALMSALATLCRRALRQTDLFARAGGDEF 280 Query: 428 CIILVDSTPQIAAQLPERIEKRLQHI-----APQKEIGFSSGIYAMKEND-TLHDAYKAS 481 +L ++ A L ER+ ++ S G+ + + +A+ Sbjct: 281 VALLPETALDDATTLAERLRTLVEAEPLLRGPVPVGATVSIGVATYVAHGRSWAAMLQAA 340 Query: 482 DERLYVNKQNKNSR 495 D+ LY K +R Sbjct: 341 DDALYRAKAAGRNR 354 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 ++ + + + R D +T L NR+ ++ +++ + GS + + +D+D Sbjct: 198 IIAIALQRDGHEKQLYRLATQDGLTELNNRRQFIELADREIERSRRHGSRMSVLMMDLDH 257 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K IND GH GD I +Q ++ +R SD RLGG+EF +L D+ A Q+ ER Sbjct: 258 FKDINDHYGHAVGDEVIRHFSQVCREVLRASDLCGRLGGEEFAAVLPDTGLDDARQVAER 317 Query: 446 IE-----KRLQHIAPQKEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 + RL ++ S G+ ++T + + +D++LY K++ +R Sbjct: 318 LRSLASSARLSAVSGSLGYTVSIGVAERHADETDIDEVLGRADKQLYQAKRDGRNR 373 >UniRef50_C0QDC5 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDC5_DESAH Length = 305 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 103/255 (40%), Gaps = 6/255 (2%) Query: 247 NIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDIL 306 + T ++ + + D + + Y + V+ Sbjct: 40 ELLNTFTPDIVLTDIMMQGMDGLELTRFVRKNYGVAVLVMTGYSANYSYEEAVNAGASDF 99 Query: 307 YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL 366 F ++ + I L + + R H ++ + I+D +TGLYN + +L+ + Sbjct: 100 IFKPFRFEELDLRIKRVLREVRLKREHAKMVDKLEELAITDGLTGLYNSRHFFCQLKAEI 159 Query: 367 QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE 426 ++ + + + +D+D K NDT GH EGD + + + I +R +D A R GG+E Sbjct: 160 ERYTRYHHPLSVLLLDIDLFKNYNDTWGHLEGDKVLMTMGEIITSCLRSNDTAYRYGGEE 219 Query: 427 FCIILVDSTPQIAAQLPERIEKRLQHIAPQK------EIGFSSGIYAMKENDTLHDAYKA 480 F ++L ++ + A + ERI L ++ S G +DTL K Sbjct: 220 FTVVLPETRVEEACLVGERIRGILSQRVFTPEKEKTAKVTISIGATQFSTSDTLESFIKR 279 Query: 481 SDERLYVNKQNKNSR 495 +D+ +Y +K+ + Sbjct: 280 ADKAMYDSKKAGRDQ 294 >UniRef50_Q216C5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodopseudomonas palustris RepID=Q216C5_RHOPB Length = 735 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 115/303 (37%), Gaps = 21/303 (6%) Query: 213 QRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGR 272 R + +++S Y G+V+L L + L T R Sbjct: 416 DRLEASLLSFDGEFYFVND-DGVVMLSNRAEMLGRALWPRAVDELRLAKPSPAAKTMMSR 474 Query: 273 DII--INQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTAL------ 324 I+ + + D + YV GG + + + + + ++ + ++ Sbjct: 475 AIVDSVWTTADGVPAYVLRHTADEGGWSLLMVFPVTGIFPTRFLGIVITLQFSIMALFYF 534 Query: 325 ----------ILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGS 374 I L + + + +D +TG++NR++ L L + + + Sbjct: 535 YGREHGIRDSIHTEKRIELQELARGLQVQATTDPLTGMFNRRVFNEGLAAELVRFNRQQT 594 Query: 375 SVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDS 434 + D+D K+IND GH GD + L++ + +S+R++D+ R GG+EF I+LV + Sbjct: 595 PFSSLLCDIDHFKEINDVHGHLMGDQVLVHLSRILSRSVRQTDFLARWGGEEFGILLVGA 654 Query: 435 TPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNK 492 A + E++ + + + S G+ DT D LY K N Sbjct: 655 DQTAAVEFAEKLRTTIAYTVFDDVGNLTCSFGVAECVLGDTPESLLARVDNALYRAKMNG 714 Query: 493 NSR 495 +R Sbjct: 715 RNR 717 >UniRef50_Q30QW7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30QW7_SULDN Length = 439 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 126/335 (37%), Gaps = 14/335 (4%) Query: 172 NVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQ 231 N+ F +++ +I + R V I + +N+ S V + Sbjct: 102 NLHKFFQSSYQKDAQEAIKALDAYYK---VARDVSQKIIETDNNYRNIESDTKKVIENYK 158 Query: 232 LKGIVLLDIN------KNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQ 285 L +I N Y LL + L II+ D ++ Sbjct: 159 ALDTSLKNIKLKIKQDIATSVNFIYESTTFLLLNGNLIFLVWFILSTLIIVIVYRDIKYK 218 Query: 286 YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQ---NVSR 342 + V D + + I S + + + + + H L + + R Sbjct: 219 INTIVKDSKEIASGDVDFEKRLCIVSYDELGQIIKSINVFINKLHKSHEELSEAKKELER 278 Query: 343 ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAI 402 I+D +TG+YNR + ++ L+K + G I ID+D K +NDT GH GDL + Sbjct: 279 LYITDQLTGVYNRVKIDEIIDIELKKQKRYGYVCSVIMIDIDLFKLVNDTYGHLAGDLTL 338 Query: 403 TLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIG 460 + +K ++R +D R GG+EF I+ + A L + +++ + Sbjct: 339 KEFSALLKSNVRDTDNVGRWGGEEFIIVSPQTDQDGALSLANHLRSKIEEFTFTTVGKKT 398 Query: 461 FSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S G+ + E+D + +D+ LY K + ++ Sbjct: 399 ASFGVASCSEDDDIQSLIDNADKALYRAKNSGRNK 433 >UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=B8KJJ5_9GAMM Length = 540 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 2/172 (1%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + R + + D +T +NR+ L L L++ + + + +D+D Sbjct: 353 VTQRTRELEAKNEELDHLASVDKLTDTFNRRALDKALLAELERADRYQRPLSILLMDIDL 412 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQ+ND GH GD + L+Q I++++R SD R GG+EF +I ++ + A + E+ Sbjct: 413 FKQVNDEYGHLTGDKVLVTLSQTIRENLRASDILGRWGGEEFLVICPETDLEQARNVAEK 472 Query: 446 IEKRLQHIAPQK--EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + ++ + I S G+ + E + +D+ LY K +R Sbjct: 473 VRQAIEGTDFELGKTITISIGLSVLIEGTSAESLVAEADKALYQAKSQGRNR 524 >UniRef50_A8UVB7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVB7_9AQUI Length = 525 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 116/319 (36%), Gaps = 12/319 (3%) Query: 180 NWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLL--TPVYVAGQLKGIVL 237 W + I +DI + ++ ++ + + + + + I+ Sbjct: 210 KWVLDHTVPIFGRDRDITHYYGYLIDITEKHEQEELFRKLAESNPNGVILFNFKNNSIIY 269 Query: 238 LDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGI 297 + + + L + + D I + + + V L G Sbjct: 270 ANRAVSEITGYSEEELESLKDPLILIHPKDKHIVIKNIQRRIKGERKPFSYSVRFLTKGG 329 Query: 298 RVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKI 357 + + IT + + L+ L + + + D +TG+YNR+ Sbjct: 330 KTKWVKIVSSVITYRGEE------STLVTLIDITKEKARERKLHTLATHDQLTGVYNRRA 383 Query: 358 LTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSD 417 L E+ L + G I ID+D K +ND GHQ GD + A+ +K S+R++D Sbjct: 384 LLMFFEKYLHSARRYGIPFSVILIDLDNFKYVNDQFGHQTGDRVLKTFAKLVKGSLRRTD 443 Query: 418 YAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLH 475 R GG+EF +L + + E++ ++++ + S G +E D + Sbjct: 444 VFGRWGGEEFLALLPFNDKP--YMVAEKLRRKVEETEFSRVGRVTASFGATTYREGDDID 501 Query: 476 DAYKASDERLYVNKQNKNS 494 +DE LY K+ + Sbjct: 502 SMMARADEALYEAKRKGKN 520 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 8/177 (4%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + + + + + +D++TGL NR+ L L +++ ++G+ + + +D+D+ Sbjct: 404 VKERTSALREANEKLEKLSNTDSLTGLNNRRSLDELLAMEVKRTCRTGAPLSAMMMDIDR 463 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSI-RKSDYAIRLGGDEFCIILVDSTPQIAAQLPE 444 K NDT GHQ GD + +A I + R SD R GG+EFC++L D+ A + E Sbjct: 464 FKAFNDTHGHQVGDACLKAVAGVIASTAQRPSDVVGRYGGEEFCVLLPDTPLDGAQIIAE 523 Query: 445 RIEKRLQHIAP-----QKEIGFSSGIYA--MKENDTLHDAYKASDERLYVNKQNKNS 494 RI ++++ + + S G+ +D+ +A+DE LY K + Sbjct: 524 RIRAAVENLDFTVSGQRVPVTISIGVSELTYCASDSGKALVEAADEALYSAKSAGRN 580 >UniRef50_C9R8E3 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R8E3_AMMDK Length = 414 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 7/245 (2%) Query: 259 RFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLF 318 + L+++ D + + +P L++ L+F+ S F Sbjct: 161 QPLSLSPEDLRRAFRQPDLLMDFFRRHGFAEGEVIPLEYDAGLALGYLFFLRRSPAPAFF 220 Query: 319 WILTALI-----LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSG 373 AL L ++ LY+ V D +TGLYNR+ + L++ + Sbjct: 221 LRRAALRENLGRLGAAALVNSYLYREVKELAERDGLTGLYNRRKFWEIFLKELERAKRYR 280 Query: 374 SSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD 433 + + +D+D K NDT GH GD + + + I + IR SD A R GG+EF I+LV+ Sbjct: 281 RKLAILLLDVDNFKDYNDTFGHLAGDECLRRIGEVIGKEIRASDTAARYGGEEFVILLVE 340 Query: 434 STPQIAAQLPERIEKRLQHIAPQKEI-GFSSGIYAMKEN-DTLHDAYKASDERLYVNKQN 491 + + A + ER+ R++ I ++ S G+ E+ + +D LY K++ Sbjct: 341 TGGEGAVAVAERLRHRVEDIGKREPFPTISLGVAVFPEDAQSAEALLTCADNALYTAKRS 400 Query: 492 KNSRS 496 +R+ Sbjct: 401 GKNRT 405 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 L + +L + + I D++TG +NR+ L LE+ L + + G + + +D+D Sbjct: 537 LRKQLEEIEKLQVALREQAIRDSLTGCFNRRYLDETLERELSRSRREGYPLSLLILDLDH 596 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K+INDT GH GD A+ +LA+ ++ IR D R GG+EF I++ IAA+ E Sbjct: 597 FKRINDTYGHMAGDQALIVLAETLRAGIRHEDVLCRYGGEEFVILMPRMPLAIAAERAEL 656 Query: 446 IEKRLQHI-----APQKEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 ++ I + S+G+ A ++ + +A+D+ LY K +R Sbjct: 657 WRSKIAEIRVTFGNFELSFTASAGVAAYPDHGKMPDELTQAADQALYTAKNEGRNR 712 >UniRef50_A4BIU7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BIU7_9GAMM Length = 318 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 115/275 (41%), Gaps = 22/275 (8%) Query: 228 VAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYV 287 + + ++ K+ + +R + + R I + ++Q Sbjct: 56 SLFDVFDDLSVEWFKHKADTVIQLRNRAFTTWEQRAYVFKFRNNRPITGV--TEYMYQNC 113 Query: 288 SYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISD 347 +++ + +V I+Y +T + +++ + +D Sbjct: 114 TFIPVIGTTGKVQNLAVIVYDVTD--------------IATSKLELKAANDRLAQLSRTD 159 Query: 348 AMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQ 407 +T LYNR L ++ + + I D+D K++NDT GHQ GD I +A+ Sbjct: 160 GLTQLYNRAYWEEMLSNEFKRQKRHAHDLSLIMFDIDHFKKVNDTYGHQVGDDVIRAVAE 219 Query: 408 AIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP-----QKEIGFS 462 ++ + R +D A R GG+EF ++L+DS + A ER+ K +++ + ++ S Sbjct: 220 EVRHNSRNTDIAGRYGGEEFALLLIDSDAENALLFAERLRKAIENRRVSTPEGELQVTVS 279 Query: 463 SGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSRS 496 G+ KE+ + +A+D+ LY +K +RS Sbjct: 280 LGVAPWKESFHHYNAWIEAADKALYTSKDEGRNRS 314 >UniRef50_B9ZP43 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZP43_9GAMM Length = 336 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 2/165 (1%) Query: 333 HFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDT 392 + + + R +DA+TG++NR+ E E + + + + I +D+D K++ND Sbjct: 159 LRQQQEELVRLASTDALTGVWNRQKFKTEAEHEVARAERYNLPLSLIFLDLDYFKEVNDR 218 Query: 393 LGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH 452 GH GD + + Q ++ +R+SD R GG+EF I++ + AA L E++ + + Sbjct: 219 YGHATGDAILREMCQRLQACLRESDRLGRWGGEEFLILVPHADSDRAALLAEKLRQAIAD 278 Query: 453 IA--PQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + S G+ + + D L D + +D LY K +R Sbjct: 279 TPAAHGQPMSISLGVVSREPGDALEDLVRKADAALYRAKARGRNR 323 >UniRef50_A1VA66 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Desulfovibrio vulgaris RepID=A1VA66_DESVV Length = 827 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 107/278 (38%), Gaps = 7/278 (2%) Query: 225 PVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLF 284 G++L + + + R R V ++ + L Sbjct: 530 RALFDNAADGLLLYEADGTLIDVNETIARRLGESREAIVGRNVASIVEPEVLERVRPRLT 589 Query: 285 QYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSREN 344 + + H + + + + + + L + L + RE Sbjct: 590 EILETGHASFESVHRTA-MGPVNVEVHARRIEFEGRFVVLSSARDITERKNLEAALLREA 648 Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITL 404 +D +TG+ NR+ + + + ++ S + + +D+D K +ND GHQ GD + Sbjct: 649 TTDPLTGVRNRRQFFVDANREFARALRHDSGLAVLMLDIDHFKNVNDLYGHQAGDEVLRA 708 Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-----KEI 459 A +++R D RLGG+EF +L ++P+ A + ER+ KR++ + + Sbjct: 709 FAACCVEALRAYDVFGRLGGEEFAALLPAASPEEAMETAERLRKRVERRSVVYEGTALQC 768 Query: 460 GFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSRS 496 S G+ ++ D D + +D LY K + +RS Sbjct: 769 TVSVGVTSLAAADLGFDDMLRRADRALYAAKDHGRNRS 806 >UniRef50_A1SVZ1 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SVZ1_PSYIN Length = 477 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 81/499 (16%), Positives = 177/499 (35%), Gaps = 44/499 (8%) Query: 10 HFIAASVIVLTSSFLIFELVASDRAMSA---YLRYIVQKADSSFLYDKYQNQSIAAHVMR 66 H + +L + +I V ++++ LR + + Q + I H++ Sbjct: 6 HIVITVTFLLVTLSVILSTVNYWVSLNSTEVQLRERSLPLTVDNISMEIQKKIIGPHIIS 65 Query: 67 ALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAAL 126 ++ A NN ++ + ++ + Sbjct: 66 SMMAND----------TFLQDWLINNEGDVDKISKYLEMIK-NKNKLLVTFLVSGKTKNY 114 Query: 127 LPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWS--FL 184 A + + E+ ++ + E + + + + Sbjct: 115 YTAEGLLEQVVEDNPNNAWYFSFMEKPDKNEINFDFNDNIDNEMIIFINHKIYDQQSHLI 174 Query: 185 QSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNN 244 + IG+ D+ ++ Y VY Q ++L + N Sbjct: 175 GATGIGLKFSDVNEMLNN---FRQKYNFN------------VYFLNQAGKVILYEKGVNP 219 Query: 245 LRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSID 304 LR+I + +L + + + + + + Y+ +L + V Sbjct: 220 LRDIKNISELNVLRDSII-----SKESKLLEYTKESEEYLMSTKYIPELDLYLVVEAKRS 274 Query: 305 --ILYFITSSWKSVLFWILTALILLNMVRMHF-RLYQNVSRENISDAMTGLYNRKILTPE 361 +L + + ++L +L +++ ++ + Y+ + DA+T L NR+ E Sbjct: 275 EFLLNVQKTFYFNLLCSLLGTILIAFLILKTVNKYYKEMEHLAKYDALTNLKNRRAFNEE 334 Query: 362 LEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIR 421 LE L + S + D+D K +NDT GHQ GD + +A +K IR++D R Sbjct: 335 LEHSLLLCKRRASHLSLTFFDLDDFKSVNDTFGHQTGDKVLQYVADILKDDIRQTDIIGR 394 Query: 422 LGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP-----QKEIGFSSGIYAMKENDTLHD 476 GG+EF + +D+ + A + E+I ++ + ++ S G+ + DTL Sbjct: 395 WGGEEFIVAFIDTELEDAKFITEKIRAHIEKDSFLSQLKNMKVTASFGLTTITTQDTLDS 454 Query: 477 AYKASDERLYVNKQNKNSR 495 + +D+ LY K+N ++ Sbjct: 455 LLERADQALYKAKENGKNQ 473 >UniRef50_D2L2B6 Diguanylate cyclase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2B6_9DELT Length = 427 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 99/263 (37%), Gaps = 10/263 (3%) Query: 243 NNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLS 302 + F R D++ ++ L V + L+ Sbjct: 135 DRRMRFFLDATRTFYRSDAGRPALSDPKFLDVLAFGQDELLRDLGKVVQEYQRQAVGRLT 194 Query: 303 IDILYFITSSWKSVLFWILTALILLNMVRMHF-----RLY---QNVSRENISDAMTGLYN 354 I + ++ + L +L + RL + ++ ++D +TG YN Sbjct: 195 ILRRVELATTVGMLALLAAVGLCILRPMVRRICADRERLEGANEALTELAVTDQLTGAYN 254 Query: 355 RKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIR 414 R +E +++ + + I D+D+ K +NDT GH GD + L + ++ +IR Sbjct: 255 RLKFNQVMEHEIKRTGRYAEPLSVIMFDIDRFKVVNDTYGHAAGDDMLRELTRRVQAAIR 314 Query: 415 KSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEI--GFSSGIYAMKEND 472 D+ R GG+EF + + AA L E++ + I S G+ + + Sbjct: 315 AVDWLFRYGGEEFVVAAPHTGRAQAAVLAEKLRALVAGAPFPHGIAGSISLGVTELAPGE 374 Query: 473 TLHDAYKASDERLYVNKQNKNSR 495 T+ + + D LY K + +R Sbjct: 375 TVEELMQRVDAALYEAKNSGRNR 397 >UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTU2_DESBD Length = 339 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 9/204 (4%) Query: 300 SLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILT 359 ++ D+ F+ S V +L R +S +++D +TG+ NR+ Sbjct: 126 GMARDLTRFLVSQNALVHLNEQLEAKILQRTRELEEANHRLSELSLTDGLTGIANRRRFD 185 Query: 360 PELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSI-RKSDY 418 L + + ++GS++ I +D+D K+ ND GHQ+GD + +A+ ++ S R+ D Sbjct: 186 AALAEEWSRSARTGSTLALIMLDIDHFKKYNDHYGHQQGDDCLRRVAEVLRSSARRQGDL 245 Query: 419 AIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK------EIGFSSGIYAMKE-- 470 R GG+EFC+IL D+ A ++ ER+ + ++++ + S G+ A Sbjct: 246 VSRYGGEEFCMILPDTALPGAFEIAERLRREVENMDMPHVLSDVGRVTASMGVAASMPCK 305 Query: 471 NDTLHDAYKASDERLYVNKQNKNS 494 + + + +DE LY K + Sbjct: 306 AMSPAELLRRADESLYQAKSEGRN 329 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 10/180 (5%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + + + + +++D +T + NR+ +LE + ++ + I +D+D Sbjct: 372 VRERTEELEQANEQLRAISLTDGLTHVANRRRFDEKLETEWNRALRHEHELSLILLDIDH 431 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSI-RKSDYAIRLGGDEFCIILVDSTPQIAAQLPE 444 KQ+ND GH GD + LA + + R D R GG+EF I+L + A Q+ E Sbjct: 432 FKQVNDRFGHLVGDDCLVALASILSDEVQRSGDLVARYGGEEFAILLPTTDVAGAQQVAE 491 Query: 445 RIEKRLQHIAP-------QKEIGFSSGIYAMKEN--DTLHDAYKASDERLYVNKQNKNSR 495 R+ + + S G+ + N + + +DE LY K + +R Sbjct: 492 RMRLSVARTPVNSGEHMSPVSLTISLGVATLTPNRQSDCQELIRRADEALYAAKSDGRNR 551 >UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geobacter RepID=C6E9C6_GEOSM Length = 713 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 9/226 (3%) Query: 278 QSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLY 337 +S+ + + + G + +S ++ F + + + + A +++ Sbjct: 448 KSKSLICMPLKLKDKIIGVLNLSDKKNLAPFTDADLQVLTSFANLASLMIER-TEVLEES 506 Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + +++DA+TGLYNR+ L LE+ L + ++ G ++ I ID+D K ND GH Sbjct: 507 ERFEQLSVTDALTGLYNRRFLKNRLEEELNRSIRQGLNLTVIFIDLDFFKNYNDLCGHLA 566 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK 457 GD A+ + A+ IK S+R D R GG+EFC +L ++ A + ERI ++ Sbjct: 567 GDDALRITAEIIKASLRDMDIVARYGGEEFCAVLPGTSKVEAMIVAERIRSEIEREKFPG 626 Query: 458 -------EIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + S G+ + E+ T ASD LY K +R Sbjct: 627 ESEIPQVRLTASLGVASFPEDGRTFTALVHASDVALYEAKAGGRNR 672 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 7/207 (3%) Query: 296 GIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQN-VSRENISDAMTGLYN 354 + D L + ++ ++ + L + ++ + Q + R +D +TGL N Sbjct: 212 TLIRETDTDKLMIVAATIGTIGLLLGITYFLTWRLVLNLDMAQKHLKRLASTDELTGLKN 271 Query: 355 RKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIR 414 R+ + L++ Q+ ++ G + I +D+D K+INDT GH GDL + +A +K+++R Sbjct: 272 RRQIMKRLDEEYQRAIRLGEPLCLIMLDLDHFKKINDTYGHPFGDLVLKCVAGHMKKALR 331 Query: 415 KSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE-----KRLQHIAPQKEIGFSSGIY-AM 468 + D R+GG+EF I+ +T + A L +R+ +++ + + I S G+ Sbjct: 332 RYDVLGRIGGEEFLIVSPGTTREEAVVLAQRLRSTVEMEKIAYEDKKVTITVSCGVAFLY 391 Query: 469 KENDTLHDAYKASDERLYVNKQNKNSR 495 K +D + K +D LY+ KQ +R Sbjct: 392 KGDDNVEILLKRADSALYIAKQEGRNR 418 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 112/289 (38%), Gaps = 19/289 (6%) Query: 216 KQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDII 275 +Q ++SL P+YV + + PLL+ L + DT + Sbjct: 82 EQMLISLFPPLYVMYFMDD-------NQARSALAMVAIIPLLYGILGI---DTKRYIRVA 131 Query: 276 INQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVR-MHF 334 L + P + + +L + + L +R + Sbjct: 132 AAYFGGYLGLLGLLLWQKPRLVTPNSEFVLLTALFMVMAQMALIGGFISKLRASLRVKNH 191 Query: 335 RLYQNVSR---ENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIND 391 +L + + + +D +TGL R+ L +L + +S ++ +D+D K+IND Sbjct: 192 QLNEALEKISVMASTDELTGLCTRRELMKQLSNEFSRCRRSSGALSLCLLDIDHFKRIND 251 Query: 392 TLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ 451 + GHQ GD + +AQ ++ +R D R GG+EF +IL + A ER+ + + Sbjct: 252 SYGHQAGDAVLKKVAQTMQSLVRSIDCLGRYGGEEFLLILPQTPLDGAFITAERLRRAVM 311 Query: 452 HIAP-----QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 I + + S G ++E + + D+ LY K +R Sbjct: 312 DIPFPEVAPEFRVTISLGAAELEEGEAMETLISRVDKALYAAKGAGRNR 360 >UniRef50_Q21HV6 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q21HV6_SACD2 Length = 301 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 13/256 (5%) Query: 248 IFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILY 307 I P L + + +D +I S + L G +S I Y Sbjct: 49 ILLDIRMPGLSGLETLEILKSDEATRMIPVIMVSATTGDQSIIRALDLGAHDFVSKPIEY 108 Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQ 367 + + +AL L+ R + + + R D +TG+ NR+ E L Sbjct: 109 ------PVLAARMRSALRLIQAKRDLEKANKELERLATRDPLTGINNRRSFFKLAEAELT 162 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 K ++ G + + +D D K INDT GH GD A+ + + + + R+SD RLGG+EF Sbjct: 163 KTIRHGRDIALLMLDADHFKMINDTYGHAAGDEALLTITEICQNACRESDILARLGGEEF 222 Query: 428 CIILVDSTPQIAAQLPERIEKR-----LQHIAPQKEIGFSSGIYAM--KENDTLHDAYKA 480 I D+ + A + ERI ++ ++H + I S GI ++ ++ + + Sbjct: 223 AICCPDTNLEGAYAVAERIRQQCENTVIEHNSASFGITLSIGITTFVPSQDKSITEMLQR 282 Query: 481 SDERLYVNKQNKNSRS 496 +D LY K+ +RS Sbjct: 283 ADNLLYQAKEMGRNRS 298 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 109/282 (38%), Gaps = 16/282 (5%) Query: 225 PVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLF 284 P+ + + +LL +K L + LL + S I +D Sbjct: 221 PMIATLRNEFNILLPSSKGELTTLLAEDQPDLLLLCTEQQWQEMLSLCQEITANKDDYTL 280 Query: 285 QYVSYVHDLPGGIRV-SLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRE 343 DL + + + F+T + + +++ + ++R Sbjct: 281 PVAFVSADLDDQRELDAYNAGAADFLTLNRAPAVLQSRIQILM-----QLKQSQDQLARS 335 Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 D +T + NR+ +E ++ +S S+ I +D+D K ND GH GD + Sbjct: 336 ARVDGLTQVNNRREFERNIEMEWRRAQRSKRSLALIMLDIDHFKPFNDGYGHLAGDGCLR 395 Query: 404 LLAQAIKQSI-RKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE---- 458 +AQ IK SI R D R GG+EF +IL ++ A + ERI K + + E Sbjct: 396 TVAQTIKHSIQRAQDMVCRYGGEEFVVILPETDLDGAQMIAERIRKAIAKLKINHEFSST 455 Query: 459 ---IGFSSGIYAMKE--NDTLHDAYKASDERLYVNKQNKNSR 495 I S+G+ + + H+ +D+ LY K ++ Sbjct: 456 DNTITISAGVACLSPSQEGSPHELILLADQGLYQAKAQGRNQ 497 >UniRef50_A3J8Q2 Two-component response regulator protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8Q2_9ALTE Length = 379 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 5/198 (2%) Query: 303 IDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPEL 362 ++ F+ + ++ + L + R F Q + +D +TGL NR + L Sbjct: 164 KQLIPFLFDPLVMIFLGMVVSGSLSQLRRSEFLSRQQLKSLASTDQLTGLLNRHAIHKSL 223 Query: 363 EQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRL 422 EQ + + + G I D+DK K++ND+ GH GD + A ++ +R D R Sbjct: 224 EQLVARHARHGHPFSLILGDLDKFKRVNDSYGHNVGDEVLIETANRLQDHVRAGDILCRW 283 Query: 423 GGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-----PQKEIGFSSGIYAMKENDTLHDA 477 GG+E ++L D+ A + E++ + E S G+ + + Sbjct: 284 GGEELLVVLPDTERDSALAVAEKLRCAIGEAPMTAGGHSIEQTISFGVTCYHNGEHIDTT 343 Query: 478 YKASDERLYVNKQNKNSR 495 +D LY+ KQ +R Sbjct: 344 IMRADSALYLAKQGGRNR 361 >UniRef50_B0TV39 Diguanylate cyclase n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TV39_SHEHH Length = 295 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 2/178 (1%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 I+ L + + L + + +D +TGL NR L L +++L + + I Sbjct: 112 IIGILGISTDITFAKLLEEKALKLAKTDVLTGLANRLELDSVLSYEIERLKRFQHPLSII 171 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 +D+D K +ND GH GD + +A+ +K + R D R GG+EF II ++ A Sbjct: 172 MLDLDHFKTVNDNYGHLLGDKCLINIAKMMKNNFRLIDTVGRWGGEEFLIICPETDFNGA 231 Query: 440 AQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +L E+ + ++ K I S G+ + E DT +D+ LY K+ +R Sbjct: 232 IKLAEKFRRLIEEHIFPEVKRITGSLGVTSFIEGDTHETLVNRADKALYKAKKAGRNR 289 >UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ36_DESVM Length = 698 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 V + + +D +TG+ NR+ LE + + G + + +D D Sbjct: 493 FFLDVTDQVEDTLRLEQLATTDELTGVANRRHFMARLEDEAARAQRYGRPLSVLLLDADH 552 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K INDT GH+ GD+ + + + S+R++D RLGG+EF ++L ++ + A + ER Sbjct: 553 FKSINDTWGHEAGDMVLRHITDVMGLSLRENDLIGRLGGEEFGVLLPETAQERALRTAER 612 Query: 446 IEKRLQHIAPQKE-----IGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNSR 495 I ++ S G + ND+L D + +D L K+ +R Sbjct: 613 IRAAVEDAPVAVRDVWVGCTVSVGAAEYRGANDSLDDLIRRADHMLMRAKEEGRNR 668 >UniRef50_C1D6K0 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6K0_LARHH Length = 585 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 87/197 (44%), Gaps = 2/197 (1%) Query: 301 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP 360 + + F S + ++ + + + + +D +TGL NR L Sbjct: 385 IEGPLKTFDAISRQHSRILQRLVYFNNVLINELVSSNRELEKLSSTDRLTGLANRLRLDE 444 Query: 361 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI 420 E+ +++ + I +D+D K +ND GHQ GD + +A ++Q++R SD A Sbjct: 445 EVARQISLAQRHAQEFSLILLDLDHFKLVNDQHGHQVGDRVLIEIAALLRQTLRNSDTAG 504 Query: 421 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAY 478 R GG+EF I+L ++ + A ++ +++ + + S GI DT + Sbjct: 505 RWGGEEFLIVLPQTSVESARKVADKLRRTIAGHNFGSVGPQTASFGIAVWHTGDTAKTLF 564 Query: 479 KASDERLYVNKQNKNSR 495 D +Y +K++ +R Sbjct: 565 VRVDHAMYQSKRDGRNR 581 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 7/174 (4%) Query: 329 MVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQ 388 V + R +D MT L NR+ ++ +++ ++ + + D+DK K Sbjct: 656 DVTESREKENQLRRMATTDDMTKLNNRRYFIELVKSEIERSIRYSRPLSLVMFDVDKFKA 715 Query: 389 INDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 +NDT GH GD+ + +A K +R D RLGG+EF + L ++ + A L ER+ Sbjct: 716 VNDTYGHDVGDMVLKAIAATAKGVLRDVDIIGRLGGEEFAVGLPETDLKGAMLLAERLRV 775 Query: 449 RLQHIAPQKE------IGFSSGIYAM-KENDTLHDAYKASDERLYVNKQNKNSR 495 L+ + + S G+ + + + K +D LY K+N +R Sbjct: 776 VLEEASVELPDGGIVDFTVSLGVAVLDRSITDVDVLLKHADLALYAAKENGRNR 829 >UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5V1I0_ROSS1 Length = 681 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 7/167 (4%) Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394 L+ R D +TG++NR+ + + Q+ ++ + + ID+D K +NDT G Sbjct: 500 HLFAEARRHATIDELTGVWNRRTFFENVRREFQRSQRTLHPLAILMIDVDHFKSVNDTYG 559 Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454 H GD + +A+ + +R D R GG+EF + L ++ A Q+ ER+ ++ Sbjct: 560 HAAGDQVLRGVAERCRNQLRVIDIIGRYGGEEFAVALPETDIHAAGQIAERLRIAVERAP 619 Query: 455 P-----QKEIGFSSGIYAMKEND--TLHDAYKASDERLYVNKQNKNS 494 + S G +D TL +D LY+ K++ + Sbjct: 620 FVTDYGSISLTISVGAAVYHPDDHVTLDAVIDRADRALYIAKRSGRN 666 >UniRef50_C1XYG3 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYG3_9DEIN Length = 354 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 5/190 (2%) Query: 311 SSWKSVLFWILTALILLNMVRMHFRLYQNV---SRENISDAMTGLYNRKILTPELEQRLQ 367 S+ S+ + L L L ++ ++ +L +N+ + +D +T L NR+ L P L+Q LQ Sbjct: 153 SALNSIAQFYLANLAFLALLNVYAQLRENMLIMEQLAHTDHLTRLTNRRGLEPLLKQELQ 212 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 + + G + D+D K++ND GH GD + +A + ++R++D R GG+EF Sbjct: 213 RAERYGLPFAVLLADLDHFKEVNDRHGHAIGDQVLREVAPRLDHNLRQADTVARWGGEEF 272 Query: 428 CIILVDSTPQIAAQLPERIEKRLQHIAP--QKEIGFSSGIYAMKENDTLHDAYKASDERL 485 I+ + A QL ER+ + ++ + S G+ + D+L + +DE L Sbjct: 273 LILAPTTDLAQAGQLAERLIEVIRSEPVVGSIPVTISIGVSCYRAGDSLESLLQRADEAL 332 Query: 486 YVNKQNKNSR 495 Y K +R Sbjct: 333 YRAKALGRNR 342 >UniRef50_B7K273 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Cyanobacteria RepID=B7K273_CYAP8 Length = 308 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 122/303 (40%), Gaps = 13/303 (4%) Query: 206 LSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDI-----NKNNLRNIFYTHDRPLLWRF 260 + ++ V + V + ++ V K L + +L Sbjct: 1 MKPFKPEEFLILVVDDISKNVQLLIEILDTVGYATTFAIGGKQALERVKSVKPDLILLDL 60 Query: 261 LNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWK--SVLF 318 + + + + + +++ N+ + + + + ++T +K +L Sbjct: 61 MMPEINGLEVCKILKSDEATANIPILFLTASNDKEHLIKAFEQGAVDYVTKPFKVPELLA 120 Query: 319 WILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 + T + L + + Q + + +D +TG+ NR+ L ++ Q+ ++ G+ Sbjct: 121 RVKTHVELKQVQKQLQEACQTMKKLADTDELTGIANRRCLLEFAQREFQRSLRYGTPFCL 180 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 + ID+D K IND GH GD AI + + IK +R+ D+ R GG+EF ++L + Sbjct: 181 LMIDVDHFKNINDKYGHPNGDKAIQWVVEIIKLGLREVDFFGRFGGEEFIVVLPQTALGG 240 Query: 439 AAQLPERIEKRLQHIAPQKE-----IGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNK 492 A ++ ERI + + E + S G+ D T+ + +D+ LY K Sbjct: 241 ALEVAERIREAIASQPLTLEQDTVTLTASIGVATYTGEDKTVVGMIQRADKSLYQAKAKG 300 Query: 493 NSR 495 ++ Sbjct: 301 RNQ 303 >UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID=Q98G89_RHILO Length = 426 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 7/165 (4%) Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + +++I D TGLYNR+ L + L+++ +SG + I +D+D KQ NDT GH+ Sbjct: 240 ETLRQQSIRDPNTGLYNRRYLEETSSRELRRMERSGQPLAMIMLDVDHFKQFNDTFGHEA 299 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK 457 GDL + +A + R+SD R GG+EF +++ ++ AA+ E + K ++ + Sbjct: 300 GDLVLKQVAATLLDHARESDVVSRYGGEEFALMMPGTSLADAAERAEALRKAIKQLHLTH 359 Query: 458 E------IGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNSR 495 I S G+ A E + + A+D LY K + R Sbjct: 360 RGRTLGTITASFGVSAFPELGASWVEIVNAADRSLYQAKADGRDR 404 >UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZW4_HYPNA Length = 455 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 8/205 (3%) Query: 299 VSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKIL 358 + + + I + + I T + + + ++ D +TGL+NR+ + Sbjct: 245 LEIGASDMITIPIDRQELAARIRTQTRRTRYIDILRQRVDRGLELSVIDQLTGLHNRRYM 304 Query: 359 TPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDY 418 +LEQ +Q+ + + + D+D K +NDT GHQ GD + + + ++ ++R +D Sbjct: 305 NGQLEQFMQRAARGNQPLSLMMTDIDHFKAVNDTHGHQAGDDVLREIGKRLRANVRPTDV 364 Query: 419 AIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ-------KEIGFSSGIYAMK-E 470 R GG+EF +++ ++ +A ERI K + I S+G+ ++ Sbjct: 365 VCRTGGEEFVVLMPNTPGDLACAAAERIRKAVAAEEFPVLGGSQNLRITVSAGVSTLQGA 424 Query: 471 NDTLHDAYKASDERLYVNKQNKNSR 495 DT D +D LY K +R Sbjct: 425 GDTTDDLMHRADTALYQAKTGGRNR 449 >UniRef50_Q2IXE2 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Alphaproteobacteria RepID=Q2IXE2_RHOP2 Length = 457 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 117/271 (43%), Gaps = 13/271 (4%) Query: 238 LDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSED-NLFQYVSYVHDLPGG 296 +D+ N +F+ + +++ L + D R +S + + + D Sbjct: 181 IDVEPNPSEALFHAAEGNYDLLIVSLGLENFDGLRLCSQARSLERTRHVPILAIADADNN 240 Query: 297 IRVSLSIDI---LYFITSSWKSVLFWILTALILLNMVRMHFRLY-QNVSRENISDAMTGL 352 R+ ++I Y + K+ L I H R Q+ I+D +TGL Sbjct: 241 ARLLRGLEIGVNDYLLRPVDKNELLARARTQIRRRRYTDHLRDNVQHSIEMAITDGLTGL 300 Query: 353 YNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQS 412 +NR+ + L ++ G + + +D+D K INDT GH GD + A IK+S Sbjct: 301 HNRRYMESHLATLAEQAGSRGKPLALMILDIDFFKAINDTYGHDAGDDVLREFAVRIKKS 360 Query: 413 IRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE-------IGFSSGI 465 IR D A R GG+EF I++ ++ Q+A + ER+ + + E + S G+ Sbjct: 361 IRGIDLACRYGGEEFVIVMPETDLQVAQMVAERLRRAIAGEPFAIEKGTKRIAVTISIGL 420 Query: 466 YAM-KENDTLHDAYKASDERLYVNKQNKNSR 495 + ++ + + D K +D LY K + +R Sbjct: 421 STLERKGEAVRDLLKRADTALYRAKHDGRNR 451 >UniRef50_Q31GI5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GI5_THICR Length = 532 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 95/189 (50%), Gaps = 1/189 (0%) Query: 308 FITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQ 367 F+ + ++ +L++ +R R + + + +D +TGL NR I L + ++ Sbjct: 336 FLQHLLINEFLLLIISLLVFFFIRNQIRQRRLLHKMAKTDNLTGLPNRSIFKRALNENIK 395 Query: 368 KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEF 427 + + + I D+D K+INDT GH GD + +A+ I+ + D R GG+EF Sbjct: 396 RSNKKQWPLSLIFFDIDHFKKINDTYGHLVGDKVLKKVARNIEDGLTHKDIFARWGGEEF 455 Query: 428 CIILVDSTPQIAAQLPERIEKRLQHI-APQKEIGFSSGIYAMKENDTLHDAYKASDERLY 486 I+L ++ Q A ++ ER+ ++L+ + I S G+ ++ +DT + DE LY Sbjct: 456 VILLPNTDLQDAEKVAERLRQKLEAMTDFDITITSSFGVSDLRPDDTAESFMQRGDEMLY 515 Query: 487 VNKQNKNSR 495 +K+ +R Sbjct: 516 RSKEQGRNR 524 >UniRef50_C8R031 Diguanylate cyclase with GAF sensor n=2 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R031_9DELT Length = 493 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%) Query: 319 WILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMF 378 + L + RL++NV +E + D +TG+YNR+ E+ L K + +S+ Sbjct: 173 FFCAVAHNLAVALERARLFENVRKEAMHDGLTGIYNRRFFLECAERELHKCQRGSNSLSL 232 Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438 + ID+D K +ND GH GD + LA+ ++ IR+SD R GG+EF ++L D+ + Sbjct: 233 LFIDIDHFKDVNDNFGHVFGDQVLRQLAKILQCGIRQSDIPARYGGEEFVVLLPDTNGEA 292 Query: 439 AAQLPERIEKRLQHI-----APQKEIGF--SSGIYAMKEND-TLHDAYKASDERLYVNKQ 490 A L E++ ++ ++ + G+ + E+ T+ D + +D RLY K+ Sbjct: 293 ACCLAEKLRSKVAEDLVATPPHEQPKTINLTVGVASYPEDGKTVIDLLRVADRRLYKGKE 352 Query: 491 NKNSR 495 +R Sbjct: 353 EGRNR 357 >UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQK2_CHRVO Length = 585 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 3/173 (1%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 L R+ + +++ +DA+TGL+NR +L++ + +SG+ + +D+D Sbjct: 405 LRESNRLLVQKAAQLAQLARNDALTGLHNRMAANEQLQEEHLRHGRSGAPYAVLLLDVDH 464 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K++NDT GH GD + +A ++++ R +D+ R GG+EF ++L ++ AA L E+ Sbjct: 465 FKRVNDTHGHDAGDRVLRHIADILRRAARATDFVARFGGEEFLLLLPETDADGAAVLAEK 524 Query: 446 IEKRLQHI--APQKEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 I ++ + S G+ + D+ A K +D+ LY K +R Sbjct: 525 IRASVEQSQAPDVGRVTLSIGLATVVPADSQPEMAVKRADQALYRAKAAGRNR 577 >UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9S7_SPHTD Length = 1765 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 6/185 (3%) Query: 317 LFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 T + + RL+ V R ++D +TG YNR+ L E+ L + + + Sbjct: 1577 AGIAFTFAGQAGVAIENARLFAEVQRLAVTDDLTGTYNRRHLLTTAERELSRAQRFNRPL 1636 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 I +D+D+ K++ND GH GD + +A ++ +R+ D R GG+EF IIL ++ Sbjct: 1637 AAIILDIDEFKRVNDAHGHAVGDEVLRAVADRLRSGLREVDVLGRYGGEEFVIILPETDL 1696 Query: 437 QIAAQLPERIEKRLQHIAP-----QKEIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQ 490 A Q+ ER+ + + S G+ A D+ LY K+ Sbjct: 1697 ISAYQIAERLRNSIAAEPIATSTGPVSVTISLGVAAADPTTPDFASLLSRIDDLLYTAKR 1756 Query: 491 NKNSR 495 +R Sbjct: 1757 RGRNR 1761 >UniRef50_C4XH70 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH70_DESMR Length = 570 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 2/175 (1%) Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 L L R Q ++ +++D +TGL NR+ L L ++ + G+ I ID Sbjct: 382 TLELDAKNRELDAKNQALAVLSLTDRLTGLCNRRRLDQVLSGEWRRAHRYGTPFSVIMID 441 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K +NDT GH GD + +A + +R++D R GG+EF ++ ++T + A L Sbjct: 442 LDNFKDVNDTFGHAVGDAVLLRVADILLAVVRETDVVGRFGGEEFLLVCPETTVEDARVL 501 Query: 443 PERIEKRLQHIAPQK--EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 E + + LQ I S G+ + + +D+ LY KQ+ ++ Sbjct: 502 AEALRRELQDTDFPIVGRITASFGLADYEADPGPAALVARADKALYRAKQSGRNQ 556 >UniRef50_B6BGM9 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGM9_9PROT Length = 334 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 66/271 (24%), Positives = 136/271 (50%), Gaps = 3/271 (1%) Query: 228 VAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYV 287 GQ +V+ DI+ ++ I T + + + + S +++IN + + +++ Sbjct: 61 DNGQYYDLVISDIDMPHMNGIEMTRAISEINKEQAILIISAFSNSEMLINLIDIGINKFI 120 Query: 288 SYV-HDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENIS 346 D + +S ++ + + +++ L+ + L ++ ++ I+ Sbjct: 121 QKPTKDHEFFLVLSKMLNDISIEKENIENIKNIKLSNIKLEEKIQQELSKNIELNALAIT 180 Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGLYNR L L+ + K+V+ + + I ID+D+ K INDT GHQ GD + + Sbjct: 181 DKLTGLYNRVKLDKVLDLEINKMVKLQAEISIIFIDIDRFKPINDTYGHQIGDKVLQSFS 240 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSG 464 Q +K +IRK+D R GG+EF II ++ + + L E + K +++ + + KE+ S G Sbjct: 241 QVLKNNIRKTDIVGRWGGEEFLIICHEANIEGSLHLAENLRKIIENTSFEYIKELTASFG 300 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + ++ D++ + +D+ LY K N ++ Sbjct: 301 VASFEDGDSIDSLVERADKALYKAKHNGRNK 331 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 6/174 (3%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 + + + + +DA+TG+ NR+ L + + + + G+ + + +D+D K Sbjct: 287 EALLQVQEANRKLEQLASTDALTGVANRRQLVERADMEVPRSERHGAPLSLLCLDLDHFK 346 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 +IND GH GD + +A+AI+QS+R SD R+GG+EF ++L D+ A + ERI Sbjct: 347 RINDDYGHLAGDEVLKQVAEAIQQSLRPSDLLARVGGEEFHVLLPDTDLAGARDVAERIR 406 Query: 448 KRLQHIAPQ-----KEIGFSSGIYAM-KENDTLHDAYKASDERLYVNKQNKNSR 495 +L+ + + S G + + + +DERLY K +R Sbjct: 407 VKLEGLDIPVQGVVLHVTVSVGCAQLGPDGADMKSLTHTADERLYQAKALGRNR 460 >UniRef50_B8FCK6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCK6_DESAA Length = 301 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 9/205 (4%) Query: 300 SLSIDILYFITSSWKS--VLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKI 357 L ++T ++ ++ + T L + + + + D +TGLYN + Sbjct: 93 GLEAGASDYVTKPFEEGELVARVNTHLRIKELYESLQETNRQLQELANRDGLTGLYNHRY 152 Query: 358 LTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSD 417 + + Q+ ++ S+ + D+D K+ NDT GHQ GD+ ++ LA+ ++ S+R +D Sbjct: 153 FQDAMTKDFQRAMRYHESLSCVLCDIDFFKKFNDTYGHQTGDIVLSTLARIVEDSLRDTD 212 Query: 418 YAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP-----QKEIGFSSGIYAMKEND 472 A R GG+EF ++L + A + ER+ + ++ + S G+ D Sbjct: 213 LAARYGGEEFALVLYHTPAAAAFMVAERLRESVEQHEFIANDLSLSVTISVGVATYPHPD 272 Query: 473 TLH--DAYKASDERLYVNKQNKNSR 495 + +D+ LY K+N ++ Sbjct: 273 IPDHKTLIECADKALYKAKENGRNQ 297 >UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B2SWP1_BURPP Length = 516 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 69/279 (24%), Positives = 117/279 (41%), Gaps = 28/279 (10%) Query: 245 LRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNL----------FQYVSYVHDLP 294 L + RP + + + LT T + S D + ++ P Sbjct: 210 LSDGTMLMRRPFDPKIIGINLTGTANYSRFTQQPSGDFFGTAAIDGVERWYAFRHIDMYP 269 Query: 295 GGIRVSLSIDILY-------FITSSWKSVLFWILTALILLNMVRMHFRL--YQNVSRENI 345 + V+LS +Y +I S + L + AL +L ++ +R + + Sbjct: 270 LILDVALSTRDIYVEWRHRAWIIGSLIAALDVTIIALAVLFSYQLRYRRAAEEELRVLAR 329 Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 +D +TGL NR+ E ++ ++ + + ID+D K ND GH GD A+T + Sbjct: 330 TDGLTGLNNRRTFEEHAEDEWRRAQRNAWPLSMLLIDVDSFKGFNDLYGHSAGDDALTAV 389 Query: 406 AQAIKQSIRK-SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP------QKE 458 A+ I QS+R+ D A R GG+EF ++L D+ AA + E+I +Q + Q Sbjct: 390 ARCISQSVRRPGDTAARYGGEEFAVLLPDTDETGAAFIAEKIRAAVQALQLRHVASSQHV 449 Query: 459 IGFSSGIYAMKEN--DTLHDAYKASDERLYVNKQNKNSR 495 + S GI + T A+D+ LY K +R Sbjct: 450 LTVSIGIATTRGEAFATSRALLNAADDALYEAKDAGRNR 488 >UniRef50_B9ZLB8 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLB8_9GAMM Length = 332 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 2/160 (1%) Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 +++ +D +TGL+NR LE L++ + S + I +D+D K IND GH Sbjct: 168 QRHLEHLATTDPLTGLHNRMKGNHALEDELERARRQSSPLATIMVDLDHFKAINDHQGHA 227 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP- 455 +GD + + Q + + +R++D A R GG+EF I+ +T A+ L E + + ++ Sbjct: 228 QGDHVLRAVGQLLHERLRETDTAARWGGEEFLILCPHTTAGQASSLAETLRQSIEQHDFG 287 Query: 456 -QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 + S G+ A++ DT +D LY K+ + Sbjct: 288 TDPPLTASFGVAALEPGDTAEGLIARADRALYAAKRASRN 327 >UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087A8_SHEFN Length = 321 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 122/292 (41%), Gaps = 6/292 (2%) Query: 208 SIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTD 267 + Y+ Q+TK+ ++ + I L D + T D + +D Sbjct: 26 NRYRQQQTKKMMLDTYELILDQVDAY-IYLKDTQCKYVYANQLTLDYFGVTLEKLKGTSD 84 Query: 268 TDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYF--ITSSWKSVLFWILTALI 325 +D +++ N + ++ L I V ++ + + + ++ + Sbjct: 85 SDYFPANVVDILHVNDTKVLNSQSKLSDDIIVDTPASLIVYHEVKQPLYNHKGTLIGLIG 144 Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 + + + L + R +D +TGL+NR+ T E + + + ID+D Sbjct: 145 ISTDITAAYHLRSKLERLANTDPLTGLFNRRSFTSFCEHEFFRATRYFQPFSLMIIDIDL 204 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K++NDT GH GD I +A + +R++D R+GG+EF I+L D+ A L ER Sbjct: 205 FKKVNDTYGHLVGDEVIKRVANICNEHVREADVLARIGGEEFAILLPDTDIDSAYVLAER 264 Query: 446 IEKRLQHIAPQ--KEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNS 494 + + Q Q I S G+ ++ D + +K +D+ LY +K + Sbjct: 265 LREAQQQYEEQKTPSITISIGVATLRSQDKAFLEIFKRADKALYSSKNVGRN 316 >UniRef50_Q88L38 Sensory box protein n=12 Tax=Pseudomonas RepID=Q88L38_PSEPK Length = 800 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 2/171 (1%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L + + + + +++D++TG++NR+ L+ L++ + G + I +D+D Sbjct: 624 LTDISDLKGVEEELRALSVTDSLTGIHNRRYFQERLKIELERAQRDGLPLAVIMLDIDHF 683 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K+IND GH GD + L Q I Q +R++D RLGG+EF ++ S A L + Sbjct: 684 KRINDRFGHAVGDRVLRSLCQRIAQRLRRTDVFCRLGGEEFMVLCPGSDANQARLLALEL 743 Query: 447 EKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + ++++ + ++ S G+ + + +D +Y KQ R Sbjct: 744 WQGVRNVPVEGVGQVTASFGVAGWRSGEGADALLLRADAGVYAAKQAGRDR 794 >UniRef50_Q2W220 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W220_MAGSA Length = 466 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 103/261 (39%), Gaps = 7/261 (2%) Query: 238 LDINKNNLRNIFYTHDRPLLWRFLNV-TLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGG 296 I K L N+ P L + L D RDI+ + Sbjct: 200 YTIRKEGLFNLKIAGQMPNYSNNLRIGVLRDQPRLRDIL--NKAIATITPTERGQIINQH 257 Query: 297 IRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRK 356 + + + I Y +T L +L + +L + + R + +D +T L NR Sbjct: 258 VAIQVQTGIDYALTIKIALGLSAVLAVVAYWG--WRMRKLSRELDRLSQTDNLTNLPNRT 315 Query: 357 ILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKS 416 L + L + + G + I ID+D K+IND GH GD + +A +++S+R Sbjct: 316 RLNLQFPIELARARRLGQGLSLIMIDVDHFKRINDEFGHLVGDKVLIAMADLVRRSVRAI 375 Query: 417 DYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK--EIGFSSGIYAMKENDTL 474 D R GG+E ++ DS A L ERI + ++ S G+ + +D + Sbjct: 376 DLPARWGGEELVVLCPDSHLDQALILAERIRQAVRDHDFDTGRRQTVSIGVATLGPSDDI 435 Query: 475 HDAYKASDERLYVNKQNKNSR 495 +D+ LY+ K + R Sbjct: 436 DQLLNRADQALYIGKSSGRDR 456 >UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNX7_RHORT Length = 492 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 6/200 (3%) Query: 302 SIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPE 361 + + + + + ++ + R+ + + R +D +TG NR+ Sbjct: 289 RARTMIYNKAVLTDAAGQAVGLVAVITDITEQKRMEEALRRLATTDPLTGALNRRAFMEA 348 Query: 362 LEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIR 421 + L + G V D+D K++ND GH GD A+ + ++R SD R Sbjct: 349 ARRDLALAQRHGEPVTVALADIDHFKRVNDQHGHATGDEALKTFVATVHGALRASDVLGR 408 Query: 422 LGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP-----QKEIGFSSGIYAM-KENDTLH 475 +GG+EF +IL + A L +R+ + L ++ + E S G+ + T+ Sbjct: 409 MGGEEFALILPHTALASAMLLADRLRQTLANLRVPCPSGEVEFTVSIGLAELGTHGTTID 468 Query: 476 DAYKASDERLYVNKQNKNSR 495 +A+DE LY K +R Sbjct: 469 TLLQAADEALYRAKSAGRNR 488 >UniRef50_C7I354 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7I354_THIIN Length = 752 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 79/493 (16%), Positives = 153/493 (31%), Gaps = 38/493 (7%) Query: 15 SVIVLTSSFLIFELVASDR--AMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQ 72 ++ S+ L+ L+A++R A+ S A + E Sbjct: 274 ILLAFASAMLLAGLLANERTVALKQVRDINATLEKKVNRRTAALQISQATTQAQLRFQES 333 Query: 73 SEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQ 132 + A ++ + L S +L Sbjct: 334 LLNALPNPVAF------SDPQGRFTRVNVAFNLL----VGLSGPEIHGRTGTQILGTTLG 383 Query: 133 AVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGID 192 + + + L + E + + D + + + + + S Sbjct: 384 RIWEDMDSELLSGSLQVTREAPYLHPDHEPTVWILNKALVRDAVSRQIVGVVTSMQDITA 443 Query: 193 RKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTH 252 K +++ + ++ V++ + ++ + ++L Y Sbjct: 444 IKQLQQQLSEDEQRFRFLAEESPVPLVITRTSDA-------ALLFSNKAADSLFRGSYAE 496 Query: 253 DRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSS 312 R L D D + + + + + LS+ + Sbjct: 497 HAGQSMRPLWGDSVDRDQLLARLQREGGIVRGVEAQFRRFDGTEVWLLLSVTRGRYRDDD 556 Query: 313 WKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQS 372 + + + +D +TG+ NR+ L++ + Sbjct: 557 ---------ALIFAFKDITEAKARESELRNLAYTDTLTGIPNRRYFLARAALELRRAQRE 607 Query: 373 GSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILV 432 GS + +A+D+D+ KQIND GHQ GD I AQ Q +R D RLGGDEF I+L Sbjct: 608 GSPFVVLALDIDRFKQINDRFGHQVGDAVIRCFAQTCMQQLRGPDLCGRLGGDEFAILLP 667 Query: 433 DSTPQIAAQLPERIEKRLQH-------IAPQKEIGFSSGIYAMKENDTL---HDAYKASD 482 +T Q+A + +R+ +Q + S GI TL + +D Sbjct: 668 QTTRQVAFDVAQRLRLSIQEASCLPSSAPDGLTLTTSIGIAEFLPTSTLMDADELLDRAD 727 Query: 483 ERLYVNKQNKNSR 495 + LY KQ +R Sbjct: 728 QALYRAKQAGRNR 740 >UniRef50_A0L7G7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7G7_MAGSM Length = 476 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 2/174 (1%) Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 + + + + +D +TG+ NR L L +Q+ + G + I D+ Sbjct: 268 VFTFADIASIESHMRKLEEIAFTDGLTGVANRASLQQILNAEMQRSRRHGGTFSIILFDI 327 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLP 443 D KQ+ND GHQ GD + LLA I ++R +D R GG+EF ++ + + A +L Sbjct: 328 DHFKQVNDNFGHQVGDDVLRLLASTIADNLRATDTIARWGGEEFMVVCPEINIEAAHRLA 387 Query: 444 ERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 E++ + ++HI K+I S G+ ++ND + +D LY K+ +R Sbjct: 388 EKLRQLIEHITFPEVKQITSSFGVTQFQKNDQSRSLTQRADCALYRAKEGGRNR 441 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 7/182 (3%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 + + +L + + + + R +D++TG +NR+ L++ + G+ + + Sbjct: 388 VGVIGVLTDISDRKAMERELRRLATTDSLTGAFNRRHFLAAAGTELERANRYGNPLTLLM 447 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 +D+D K IND GH GD A+ L + ++ ++R D RLGG+EF ++L ++ A Sbjct: 448 LDVDYFKSINDAHGHGTGDDALRRLVEGLRHALRDIDVIGRLGGEEFAVLLPETGMAGAL 507 Query: 441 QLPERIEKRLQHIAPQKE------IGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKN 493 ER+ ++ + S GI A + E+ ++ +D+ LY K Sbjct: 508 ITAERLRAQVADLRLDLPDGGQLAFTVSIGIAAPRAEDGSVEAVLARADKALYRAKDEGR 567 Query: 494 SR 495 +R Sbjct: 568 NR 569 >UniRef50_C9R7Y4 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y4_AMMDK Length = 615 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 133/335 (39%), Gaps = 11/335 (3%) Query: 167 FYEPVNVEYFAMNNWSF-LQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTP 225 F ++ F M + ++ +I + ++++ V+ I + + V + + Sbjct: 257 FNRLNDLSNFGMRAAALVMEPEAIELLVHYLKRLGVDEIVVVLIDEKTGKGRLVATYSSA 316 Query: 226 VYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQ 285 R L ++ + D +N + Sbjct: 317 TGRTEYFGEQCSYPPTPALNEVNLCYVVRILAPYCVDDVNEELDCRYACHVNPEVKSYVC 376 Query: 286 YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENI 345 Y V G S +F + +S+ ++ ++ + RL + R ++ Sbjct: 377 YPMAVGGRTLGWVRVGSRQPYFFDAETKRSIEGYVSITAAMIA----NLRLSELNRRLSL 432 Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405 D +T LYNR+ L L ++ + + + ID+D+ K +ND GH+ GD+A+TLL Sbjct: 433 IDPLTQLYNRRFLEEYLTHQVVEAQRLNRPFSILFIDVDQFKNVNDFYGHEVGDIALTLL 492 Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE------I 459 AQ IKQ++R++D +R GG+EF +L + + AAQ E++ + + E + Sbjct: 493 AQTIKQNLREADAVVRYGGEEFIAVLPGTDLEGAAQAAEKVRRAVAETPICLESGENIFL 552 Query: 460 GFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 S G+ + + + +DE +Y K + Sbjct: 553 TVSIGVAQYRIGLNPEEVIQRADEAMYQAKIKGKN 587 >UniRef50_A4X2X1 Diguanylate cyclase n=5 Tax=Actinomycetales RepID=A4X2X1_SALTO Length = 753 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 10/188 (5%) Query: 317 LFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 L + T + + R+++ R +++D +TGL+N + L L + +++ + G + Sbjct: 493 LVTLRTFAGHAAVAVDNVRVHEETQRLSLTDPLTGLWNYRYLRQSLRREVERATRFGRML 552 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 +A+D+D+ K +NDT GH GD + A+ I+ IR+ D A RLGG+EF ++L ++ Sbjct: 553 SVLALDLDRFKHVNDTHGHAAGDRVLVEFARRIRGEIREVDLAFRLGGEEFVVLLPETDV 612 Query: 437 QIAAQLPERIEKRLQHIAPQ---------KEIGFSSGIYAMKE-NDTLHDAYKASDERLY 486 AA + ER+ ++ + S G+ + T + A+DE LY Sbjct: 613 VGAAIVAERLGAAVRDTPIAVDGLGVPVLVPVTVSIGVAVHPDHGGTGQEVLNAADEALY 672 Query: 487 VNKQNKNS 494 V K + Sbjct: 673 VAKASGRD 680 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 103/223 (46%), Gaps = 13/223 (5%) Query: 286 YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLN-------MVRMHFRLYQ 338 +++++ G + +S + + T S+K++ ++ + + Q Sbjct: 235 WLAHIIFASGFLLLSFGVVQAFLTTGSFKTIYSQTELFQQIIREKKKSERALIELKAVNQ 294 Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 + +D++T + NR+ E+ + + ++ + + + ID D K+IND GHQ G Sbjct: 295 KLEELAATDSLTRVANRREFMKRSEEEMSRSSRNSTDLCLMVIDFDHFKEINDQYGHQAG 354 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP--- 455 D + + K+ +R SD R+GG+EF ++L ++ + A ++ ER+ + ++ + Sbjct: 355 DKVLKDFVKLAKEVMRPSDLLGRIGGEEFALLLPETNIRSAVKVAERLRQHIEEESIVIG 414 Query: 456 --QKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 + ++ S G+ + DT+ +DE LY K +R Sbjct: 415 SKRIKLTISIGVAEYQPKVDTVKKWLHRADEFLYQAKDKGRNR 457 >UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P7Y3_AZOSE Length = 313 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 7/181 (3%) Query: 321 LTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIA 380 L+ + ++ + RL + + +D +TG+ NR+ T Q + + + + I Sbjct: 125 LSFIGIIRDITERKRLEAELRQLATTDPLTGILNRRRFTELTTQEIHRAHRLRHPLTLIM 184 Query: 381 IDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAA 440 +D+D K+IND GH GD I LA A +R+ D RLGG+EF ++L + + Sbjct: 185 LDIDWFKRINDAFGHTVGDRVIQSLASACASELREIDILGRLGGEEFAVVLPELGASGSL 244 Query: 441 QLPERIEKRLQHIAPQK------EIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKN 493 ++ ER+ ++++ + S G+ +K+ D + +D LY K++ Sbjct: 245 EVAERLRQKVEGLQITLNDGRIVRFTCSLGVAVLKDTDQSPDTLLVRADNALYRAKRDGR 304 Query: 494 S 494 + Sbjct: 305 N 305 >UniRef50_B9MBS6 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Comamonadaceae RepID=B9MBS6_DIAST Length = 890 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 10/182 (5%) Query: 324 LILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDM 383 + V ++ + + D +TGL NR+ L L+ ++ +SG + + +D+ Sbjct: 703 MATFVDVTEQRAQHELLRKLAFMDGLTGLANRRQLDRTLKAEWRRCRRSGQPLSVVMVDI 762 Query: 384 DKLKQINDTLGHQEGDLAITLLAQAIKQSI-RKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 D KQ ND GHQ+GD + +A A++ + R D R GG+EF +L + A Sbjct: 763 DHFKQFNDLYGHQQGDDCLRAVAAALRGGLGRSHDLVARYGGEEFVCLLPECDLDGARAK 822 Query: 443 PERIEKRLQHIAPQKE-------IGFSSGIYAMKEN--DTLHDAYKASDERLYVNKQNKN 493 + + + + + + S+G+ + DT +D LY K Sbjct: 823 AQALCRAVHARQMEHRGSPIAPVVTVSAGVACVVPGAEDTPEQLLARADANLYRAKAAGR 882 Query: 494 SR 495 +R Sbjct: 883 NR 884 >UniRef50_Q02P32 Putative two-component response regulator n=6 Tax=Pseudomonas aeruginosa RepID=Q02P32_PSEAB Length = 525 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 7/182 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 LI + + Q + +D +TGL+NR + E L+ + + + + Sbjct: 339 ATLIWCYDISRRKAMEQELRLLASTDTLTGLHNRHSFLHQAELMLKAAERFRHPCVALML 398 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K IND+ GH GD A+ +A+ ++Q +R+ D RLGG+EF +L + + A Sbjct: 399 DIDHFKNINDSHGHLTGDRALQRVAETLRQGLREVDLLGRLGGEEFAALLPEVSLDQALD 458 Query: 442 LPERIEKRLQHI------APQKEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNS 494 + ER+ ++ + + S G+ ++ D L +D LY K + Sbjct: 459 VAERLRAGVEALRVSNPDGEPLRMTVSIGVALRRDAGDDLESLLVRADSALYQAKSGGRN 518 Query: 495 RS 496 R+ Sbjct: 519 RT 520 >UniRef50_Q30SV7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SV7_SULDN Length = 659 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 63/401 (15%), Positives = 147/401 (36%), Gaps = 8/401 (1%) Query: 98 LTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYY 157 + + Y G++ + + + + + H +D S M + Sbjct: 260 IGSWDYDLEDGSILWSDELFNIFEVDSDEFTPTYETIMNFIHPEDRQSFQEMFQNAIKQK 319 Query: 158 LDLNDRY-VYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTK 216 D + Y V + + + G++ + + + + Sbjct: 320 CDYSLSYRVVLGNNIEKIIYQKGRVEYDMLGNVKRITGTAQDITQRYKTSKEL---EFQS 376 Query: 217 QNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIII 276 + + S+ ++V + +N+ + YT L + + +D + +I Sbjct: 377 KLLNSVTESIFVHD--LDGNFIYLNEASYITRGYTKSEMLGMKVQELDYSDEKNSAEIYE 434 Query: 277 NQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRL 336 + Q + + IL + + + + + Sbjct: 435 ENLANLQEQLSKKEKAVLEVSHRTKDGKILPIEITCKLIKEKDKSYIISIARDISELKAM 494 Query: 337 YQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQ 396 + + + +D +TG+YNR+ ++ +++ + S++ I ID+D K+INDT GH Sbjct: 495 NKTLEKMANTDNLTGIYNRRKFEEIIKIEMERSARYNSNLSLIMIDIDHFKRINDTYGHD 554 Query: 397 EGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ 456 EGD I + + ++IR D +R GG+EF ++ + + A+ L E++ ++ + + Sbjct: 555 EGDNVIRKTVEIVSKNIRHLDVFVRWGGEEFIVLCPQTESKNASILAEKLRVAIESVNYE 614 Query: 457 --KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +I S G+ + +++ K D LY K +R Sbjct: 615 TLGKITCSFGVTSYIKDEDKSSFIKRLDTALYSAKDEGRNR 655 >UniRef50_B1I2H9 Diguanylate cyclase n=3 Tax=Clostridia RepID=B1I2H9_DESAP Length = 471 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 1/177 (0%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 + + + + +L + RE +D +TG +N++ L L L++ + G+ + I Sbjct: 289 LQIYANFVAVALANAKLIHRLEREAETDFLTGFFNKRALRNLLIVELERTTRYGTPLSVI 348 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 +D+D K NDT GH GD+ + A+ I+ SIR D A R GG+EF IIL + + A Sbjct: 349 FLDIDDFKTYNDTFGHVAGDVVLQKTAEIIRNSIRLVDIAGRYGGEEFVIILPGTKEEGA 408 Query: 440 AQLPERIEKRLQHIAPQ-KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + ERI+K ++ +++ S GI K ND++ + +D+ Y K+ +R Sbjct: 409 VAVAERIQKSIEAFPFPRRQVTTSLGIALAKNNDSVDSLLERADQACYQAKRQGKNR 465 >UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepID=Q21NS3_SACD2 Length = 319 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 97/246 (39%), Gaps = 15/246 (6%) Query: 264 TLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYF------ITSSWKSVL 317 +++ S ++ Y+ V+ D +Y + + V Sbjct: 67 PWFRQKVQSVFVLHNSAFTTWEQRPYLFKFKNYRPVTGIADFMYQNSTIIPLKDTRGKVE 126 Query: 318 FWILTALILLNMVRMHFRLYQ---NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGS 374 L + + ++ + + +D +TGL NRK + EQ ++ + Sbjct: 127 HICLIVYDVTEVAVNRLQIQAANLQLHEISRTDGLTGLLNRKTWELDAEQEYKRFKRHEH 186 Query: 375 SVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDS 434 + D+D K IND+ GH GD I A A+K IR D A R GG+EF I+L D+ Sbjct: 187 PCSLVMFDIDHFKNINDSYGHPAGDEVIRQTAAAVKSCIRDIDIAGRYGGEEFTIVLSDT 246 Query: 435 TPQIAAQLPERIEKRLQHI-----APQKEIGFSSGIYAMKENDTLHD-AYKASDERLYVN 488 + A + ERI ++Q + + S G+ + + T +D+ LY Sbjct: 247 DTEGALVVAERIRNQIQELTVHYEDFAIQFTVSLGVAQLTQQMTNRTAWIDCADKALYQA 306 Query: 489 KQNKNS 494 K+N + Sbjct: 307 KKNGRN 312 >UniRef50_Q2BIA8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIA8_9GAMM Length = 474 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 99/273 (36%), Gaps = 12/273 (4%) Query: 234 GIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDL 293 ++ + + + + + P T D I + + ++ Sbjct: 199 PVIAYALKTDGVTGLKIGGELPGYGGLGAATRNDEPELLSIFEKLTNSLSPEDFERINKK 258 Query: 294 PGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQ----------NVSRE 343 + V +D + + + + + + + + Sbjct: 259 WLAVDVKTELDYQLLGLIIAAVICLIAIFSYLYWRLNAAKEKTQEALENLKKAQIKLELM 318 Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 +D +TGLYNR + L+ L + + + ID+D K++ND GH GD + Sbjct: 319 ATTDKLTGLYNRTKIDELLQNELNRTERYNHDFGVVMIDVDFFKEVNDHYGHHVGDEVLK 378 Query: 404 LLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGF 461 A + IR++DYA R GGDEF +I ++ + + ++ + + + Sbjct: 379 EYADILSNEIRRTDYAGRWGGDEFIVICPETDIEGLKLIASKLCDAIANHEFVVIGDGTA 438 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKNS 494 S GI ++ DT+ +D+ LY K + + Sbjct: 439 SLGISTPQDGDTITTLLNRADKALYQAKNDGRN 471 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 95/177 (53%), Gaps = 7/177 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +++ ++ +L +++ ++I D++T LYNR+ + L++ + + SV I ID+D Sbjct: 893 HISLALVNLQLRESLKAQSIKDSLTDLYNRRYMEESLKREISLAQRKQHSVGLIMIDVDH 952 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 K+ NDT GH+ GDL + ++ + ++R D A R GG+EF +IL +++ + Q E+ Sbjct: 953 FKEFNDTFGHKAGDLVLQEVSNFLMINVRSGDIACRYGGEEFLLILPEASLTDSQQRAEQ 1012 Query: 446 IEKRLQHIAPQ------KEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 I + ++ + + + + S G+ + ++ T +A+D LY K+ R Sbjct: 1013 IRQGIKQLDFKRYDQSFRSVTVSVGVASFPDHGTNNDQLIQAADTALYQAKKQGRDR 1069 >UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5UZW7_ROSS1 Length = 797 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 8/176 (4%) Query: 328 NMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLK 387 + + +L+ R +D +TGL+NR + L++ + V + ID+D K Sbjct: 613 GIAITNAQLFTETQRLATTDQLTGLFNRYHFFALAPRELERARRYRHDVALLIIDVDHFK 672 Query: 388 QINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIE 447 INDT GH GD + +A +++ +R +D R GG+EF +L ++ A ++ R+ Sbjct: 673 TINDTYGHVAGDTVLQHIADHMRRELRDADILARFGGEEFIALLPETNLTGALRVAGRLR 732 Query: 448 KRLQHIAPQ-----KEIGFSSGIYAMKE---NDTLHDAYKASDERLYVNKQNKNSR 495 ++ S G ++ ++ L + +D LY K ++ Sbjct: 733 ATIEANPVPLNGQSIRATISVGCASLHPATRDEHLDTLIQRADRALYTAKAGGRNQ 788 >UniRef50_Q1JWQ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWQ3_DESAC Length = 648 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 102/247 (41%), Gaps = 10/247 (4%) Query: 254 RPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSW 313 RP L F++ + + I S D L Y + ++ + T Sbjct: 401 RPTLEYFIDKIPPEDRDEVNEAIQVSMDQLRPYEVEHRIIDSQGQLKYVREQGEVCTDED 460 Query: 314 KSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSG 373 +++ + T L + L Q + R +D +TG NR+ L +Q Q + Sbjct: 461 GNLVGMVGTVL----DITTMVLLQQKLERLATTDELTGAVNRRQLFIYTDQFCQLAKRYK 516 Query: 374 SSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD 433 ++ I D+D K +NDT GH GD + + I+ +R +D R GG+EFCI++ + Sbjct: 517 KALSVIFYDLDHFKAVNDTYGHAAGDEVLRQITTRIQSMLRDTDILARYGGEEFCILVPE 576 Query: 434 STPQIAAQLPERIEKRLQHIAPQ------KEIGFSSGIYAMKENDTLHDAYKASDERLYV 487 + A ERI +R+ + ++ S G+ +E++ +D+ +Y Sbjct: 577 TDGDHAYLFAERIRQRISESSVNLSSGESLQVTVSMGVATYQEDEQGSSLIDRADQGVYE 636 Query: 488 NKQNKNS 494 K+ + Sbjct: 637 AKRRGRN 643 >UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1B3_ACIDE Length = 445 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 85/200 (42%), Gaps = 5/200 (2%) Query: 301 LSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP 360 ++ ++ L + ++ + + + + D +T ++NR+ Sbjct: 230 ADAGMVALLSQFVVLEATLSLVLMAFGALMLTNEHITRELRHLAEVDPLTNVFNRRAFLT 289 Query: 361 ELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAI 420 LE+ + ++ S + + ID+D K+INDT GHQ GD + +RK D Sbjct: 290 LLEKAISNAQRTQSGLPVLVIDLDHFKKINDTWGHQSGDEVLRHFVALANGCLRKEDVMG 349 Query: 421 RLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA-----PQKEIGFSSGIYAMKENDTLH 475 RLGG+EF I L +++ + + + ER+ + H + S G+ +T Sbjct: 350 RLGGEEFAIFLPNASSEGSQAVAERLRALVAHHPAMTGRGPIALTVSIGVTQYGGGETSD 409 Query: 476 DAYKASDERLYVNKQNKNSR 495 + +DE +Y K+ +R Sbjct: 410 FVLQRADEAMYRAKERGRNR 429 >UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter sp. M18 RepID=C6MUF5_9DELT Length = 739 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 9/226 (3%) Query: 278 QSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLY 337 +S+ + + + + G I +S ++ F + + + + A + + Sbjct: 477 KSKSLICLPLKLKYKIIGVINLSDKKNLTPFTEADLRVLTSFANLASLTIER-TEVLEES 535 Query: 338 QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQE 397 + + +++DA+TGLYNR+ L LE+ L + ++ G ++ I ID+D K ND GH Sbjct: 536 ERFEQLSVTDALTGLYNRRFLKSRLEEELNRSIRQGLNLTVIFIDLDFFKNFNDLCGHLA 595 Query: 398 GDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK 457 GD A+ + A IK S+R+ D R GG+EFC +L ++ A + ERI ++ Sbjct: 596 GDEALKITADIIKASLREMDIVARYGGEEFCAVLPGTSKAEAMIVAERIRSEIEKEKFPG 655 Query: 458 -------EIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + S GI + E+ T +SD LY K + +R Sbjct: 656 EKDIPQMRLTASLGIASFPEDGRTFTTLVHSSDVALYEAKASGRNR 701 >UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors n=2 Tax=Synechococcus elongatus RepID=Q31K54_SYNE7 Length = 1099 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 7/180 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 T L + + +L + + +EN+ D +TGL+NR+ L EQ L + +SG S+ + + Sbjct: 887 TIAEQLALAIANLQLRETLRQENLRDPLTGLFNRRYLQEFFEQELARAKRSGDSIGILML 946 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K+ ND GH GD+ + +A+A+ +R SD R GG+E I++ ++ +++A+ Sbjct: 947 DIDYFKRFNDEFGHDAGDMVLKQVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSAR 1006 Query: 442 LPERIEKRLQHIAPQ------KEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNS 494 ++I + + + + S G+ A E K++D LY K + Sbjct: 1007 KADQIRQAIAQLIISYHEQTLPSLTISIGVAAFPESGLASDTLIKSADTSLYQAKAAGRN 1066 >UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ARY2_PELPD Length = 355 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 107/252 (42%), Gaps = 16/252 (6%) Query: 256 LLWRFLNVTLTDTDSGR----DIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITS 311 LL R + D ++ + +I ++ +L G+ + F + Sbjct: 99 LLRRNEVYYVEDREASQIPEEHLIAHEQSRSLVAVPLVSQSSIHGMLCLDDVIPRTFDKN 158 Query: 312 SWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQ 371 +L A I + + + ++ + I+D++TGL NR+ L Q ++ + Sbjct: 159 RISQILVLASFAAISI----ENAKFHEETHQLAINDSLTGLNNRRYFDKVLPQEYERAHR 214 Query: 372 SGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL 431 G + ID+D K NDT GH GD + + + +++++R D+A R GG+EF +IL Sbjct: 215 EGLPFSLMMIDVDNFKLFNDTHGHHLGDRILATIGRVLRKTLRSIDFAFRYGGEEFVVIL 274 Query: 432 VDSTPQIAAQLPERIEKRLQHI-------APQKEIGFSSGIYAMKENDTLH-DAYKASDE 483 ++ + A ++ ERI +R+ + + S GI + +D+ Sbjct: 275 PETDLESAHKVAERIRQRVMAESRKLLRNPQDRPVTVSVGISCYPRDAACSITLLAMADQ 334 Query: 484 RLYVNKQNKNSR 495 LY K+ +R Sbjct: 335 LLYQAKRTGRNR 346 >UniRef50_A8UW14 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UW14_9AQUI Length = 218 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 93/200 (46%), Gaps = 2/200 (1%) Query: 298 RVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKI 357 + + Y + + + L+ + + + +D +TGL NR+ Sbjct: 15 VMGIEKTEPYQYIVPFLVGILFGAGFSALIGLHSSLKEKEKKLKELASTDPLTGLPNRRE 74 Query: 358 LTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSD 417 + L+ + ++G+ + ID+D K INDT GH GD + LA I++++R +D Sbjct: 75 IMNFLDFEFNRAKRNGTPLSVAVIDLDDFKFINDTYGHVAGDEVLKSLASLIRRNLRSTD 134 Query: 418 YAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLH 475 R GG+EF +++ D+ A ++ ER+ + ++ + + S G+ ++E D + Sbjct: 135 MVGRFGGEEFVVVMPDTPLNTAVKVMERLRRVVEETYFEPIGSVSISVGVAQLREGDDVS 194 Query: 476 DAYKASDERLYVNKQNKNSR 495 + +D +LY K+ +R Sbjct: 195 NLLSRADGKLYQAKREGKNR 214 >UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEB9_9SPHN Length = 600 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 112/280 (40%), Gaps = 7/280 (2%) Query: 216 KQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDII 275 + +S V+ L G V ++K + ++ DRP++ + TL S Sbjct: 323 ESQTISWSREVFHIHGLAGAVPPALDKAI--DAYHPDDRPMVRAHIEQTLQHHTSFEF-- 378 Query: 276 INQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFR 335 + H G + Y + + + + + R Sbjct: 379 ---KARIVRPNGEVRHVFSKGEMDQGESNGAYGLFGIIQDISAQVAHEESMEQARRSAED 435 Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395 Q +D +TG+ NR+ L+Q + QSG SV D+D K+IND+ GH Sbjct: 436 AAQRALIMAQTDQLTGIANRRRTEFVLDQAIGAAEQSGKSVSIAIFDIDHFKRINDSYGH 495 Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP 455 GD I +AQ +R D R GG+EF I+L D+T + A ++ ERI + ++ Sbjct: 496 HTGDEVIKRVAQDAAAQLRSGDLVGRYGGEEFVIVLPDATQETALRVGERIRETIEAANS 555 Query: 456 QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + S G+ + + +T + +D LY K+ +R Sbjct: 556 GPPVTISIGVAELAQGETADALLRRADRALYSAKRAGRNR 595 >UniRef50_B7KW39 Diguanylate cyclase n=3 Tax=Methylobacterium extorquens group RepID=B7KW39_METC4 Length = 574 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 91/172 (52%), Gaps = 3/172 (1%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 +++ + L + + + + D +TGLYNR+ + LE+ ++ + G V I ID+D Sbjct: 374 MSLALSNIALREKLRNQALRDPLTGLYNRRYMEDSLERYVRLAEREGRKVSVIMIDLDHF 433 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K++ND GH GD + A AI ++R++D A R GG+E + L D + AA E+I Sbjct: 434 KRLNDEHGHATGDAVLCEAAAAIVGALRETDVACRYGGEEMIVFLPDCDLEDAAAKAEQI 493 Query: 447 EKRLQHIAPQK--EIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQNKNSR 495 R++ ++ ++ S G+ ++ + T + +A+D LY K N ++ Sbjct: 494 RGRIESLSGTHGAKVSASLGVASVPSTSGTSAELIRAADTALYRAKHNGRNQ 545 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 6/178 (3%) Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 + + V + + D++TG++NR+ + L+ + + I D Sbjct: 582 YVAVRKEVTAQKQAESKLRELATRDSLTGVWNRRYFFELAARELESAQRYKHPLSLILYD 641 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K+INDT GH GD + L Q + ++R D R+GG+EF ++L + + A + Sbjct: 642 IDHFKRINDTYGHMIGDEVLRQLTQLVGANLRNVDLLARVGGEEFAVLLPHTYLEQAHTV 701 Query: 443 PERI-E----KRLQHIAPQKEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNS 494 RI ++ A ++ S G+ + D L +D+ LY K + Sbjct: 702 ARRILRGVNEAVIRTEAGPLQLTISIGMSSSAHADNCLESLIHDADQALYAAKNKGRN 759 >UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Chloroflexus RepID=B8GC13_CHLAD Length = 728 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 9/214 (4%) Query: 291 HDLPGGIRVSLSIDILYFITSSWKSVLFWILTALI--LLNMVRMHFRLYQNVSRENISDA 348 H I + + DI + + + + L + + + + L + + I D Sbjct: 498 HHCTCCIPLVVQGDIFGLLYIAGEELPRSELIVMTGDTIKLALSNLALRATLREQAIIDP 557 Query: 349 MTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQA 408 +TGLYNR+ L L + L + + + ID+D KQ ND GH GD + LA Sbjct: 558 LTGLYNRRYLETSLSRELHRAQREQIPLTVAMIDIDHFKQFNDQYGHDAGDTLLRELAVI 617 Query: 409 IKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK------EIGFS 462 ++ +R+SD A R GG+EF +IL A + + + +Q I S Sbjct: 618 FREHLRQSDLACRFGGEEFVLILPGVNQATAQTRLQHLREVVQQRQIIFAGAPLRPITIS 677 Query: 463 SGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 G + ++ + H + +D LY K++ +R Sbjct: 678 IGYFTCEKEEIEPHILLQRADAALYAAKRSGRNR 711 >UniRef50_D1U9W6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9W6_9DELT Length = 366 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 6/180 (3%) Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAI 381 + +L V R+ + + R +D+MTG++NR + L + +SG + I + Sbjct: 164 GVVGVLVDVTERKRMIEEMCRLARTDSMTGMWNRGYFMELAGRELNRARRSGGELSLIML 223 Query: 382 DMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQ 441 D+D K INDT GH GD+A+ LA+ I +S+R+ D A RLGG+EF ++L D++ + A Sbjct: 224 DVDHFKAINDTHGHDVGDVALMELARVIGESVREVDVAARLGGEEFAVMLPDTSAEDACA 283 Query: 442 LPERI-----EKRLQHIAPQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 + RI + + S G+ + +E+ D+L K SD LY K+N R Sbjct: 284 VAVRIARTIRRAVVDSPRGPVSMTVSMGLASFEESKDSLDSLLKYSDIALYAAKKNGRDR 343 >UniRef50_C7HZC5 Diguanylate cyclase n=1 Tax=Thiomonas intermedia K12 RepID=C7HZC5_THIIN Length = 400 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 4/180 (2%) Query: 320 ILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFI 379 + + L L+ + RL + + + D +TGL NR+ LE+ + Sbjct: 204 VASFLSLIYGGMLMARLVRRLHDLALKDPLTGLLNRRAAQQLLEREWASYRHKDLPFCVL 263 Query: 380 AIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIA 439 ID+D K+IND GH GD +T LA +++ R +D+ R+GG+EF + L + A Sbjct: 264 MIDIDHFKRINDEYGHAVGDRVLTGLATLLREGTRPTDHVARMGGEEFLVFLPQTELPSA 323 Query: 440 AQLPERIEKRLQH---IAPQKEIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 ER+ + + I S G+ D+ D +D LY K +R Sbjct: 324 QAAAERLRQHTAAWVLQPEELSITISIGVAQAAAEDSAFDDLLIRADRALYAAKSAGRNR 383 >UniRef50_C5S9J2 Diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9J2_CHRVI Length = 498 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 4/192 (2%) Query: 307 YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL 366 + + SS I + LI L + + + + +D +TGLYNR+ L L + Sbjct: 283 WALVSSTPMNFSGIPSRLIGLADISELKAIQDELRAASFTDPLTGLYNRRYLYQRLAHEI 342 Query: 367 QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE 426 + + I D+D K+INDT GH GD + ++ +K IR+ D A R GG+E Sbjct: 343 DLANRYKHPLAVILFDLDLFKRINDTFGHGVGDDVLVCVSGTLKSCIREVDVAGRHGGEE 402 Query: 427 FCIILVDSTPQIAAQLPERIEKRLQHIAPQKE---IGFSSGIYAMKENDTLHDAYKASDE 483 F +IL + A ++ ERI + I+ E S G+ ++L +D Sbjct: 403 FLVILPHADLTEATEVAERIRASVAQISWSVEGLAATISGGVAQ-HCGESLDAFLDVADR 461 Query: 484 RLYVNKQNKNSR 495 RLY+ K + +R Sbjct: 462 RLYMAKDSGRNR 473 >UniRef50_Q7NQQ0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQQ0_CHRVO Length = 249 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 54/242 (22%), Positives = 99/242 (40%), Gaps = 5/242 (2%) Query: 256 LLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKS 315 + + + +++N LF L + + + + S+ Sbjct: 1 MTPWPFSARRIRKELILILLLNLGCYLLFVDWDLFEKLDVWLHQHPTSQLDEVLLLSF-- 58 Query: 316 VLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSS 375 + + +R +L + + R+ D +TGL NR+ L++ ++ +SG Sbjct: 59 -TMALSMTWFAVRRLREARQLLKALRRQAERDDITGLANRRRANQALQRETERSYRSGRP 117 Query: 376 VMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDST 435 + +D+D K IND+ GH GD+ + QA++Q R+ D R GG+EF II ++ Sbjct: 118 YSVLLLDLDHFKHINDSHGHLAGDMVLQRFGQALRQRARQLDTVARWGGEEFIIICPETE 177 Query: 436 PQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKN 493 A L E I + L+ + S G+ + ++DT +D LY KQ Sbjct: 178 QAGALTLAENIGQLLRETDFGAVARVTASIGVATLSDDDTPDSLVHRADMHLYAAKQAGR 237 Query: 494 SR 495 R Sbjct: 238 DR 239 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 6/179 (3%) Query: 323 ALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAID 382 + ++N + + +++ R + +D +TGL+NR+ + + + ++ + +D Sbjct: 357 VMAMVNDITHQQQYQEHLKRLSRTDELTGLFNRRHFITLMHKEFSRARRTHERLTLAMLD 416 Query: 383 MDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQL 442 +D K +ND GH GD + L + +++ +R D A R GG+EF I D+ A + Sbjct: 417 IDHFKDVNDKYGHDVGDHVLQHLGRILREDVRPYDIAARYGGEEFAICFPDTDLSQADHI 476 Query: 443 PERIE-----KRLQHIAPQKEIGFSSGIYAM-KENDTLHDAYKASDERLYVNKQNKNSR 495 ER+ + S G+ + E++ L K++D LY K N +R Sbjct: 477 CERLRTLCAASEVSRNGGTIGFTVSFGLSELRPEHEDLDGLLKSADNALYAAKANGRNR 535 >UniRef50_Q2SAD1 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAD1_HAHCH Length = 553 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 74/334 (22%), Positives = 127/334 (38%), Gaps = 30/334 (8%) Query: 167 FYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPV 226 P ++ S I + ++Y Q +Q + V Sbjct: 235 LQSPPDIS----QLLSKFDQCFISESDVPYRVLLIDDDSELAMYHAQLLEQAQ--MNARV 288 Query: 227 YVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQY 286 + VL++ + + Y L + + L + I Q Sbjct: 289 VSQPEDIPDVLMEFFPDVILMDLY------LPGYNGIELA-------VAIRQDATLYGVP 335 Query: 287 VSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENIS 346 + +V R L I + L + AL LL V R + + Sbjct: 336 IIFVSVEQDIAR------HLGAIRAGGDDFLIKPVPALFLLASVESRARRGRELRGMLSR 389 Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +TGL N L Q+L + + GSS+ ++ +D+D K++ND GH GD + A Sbjct: 390 DGLTGLLNHISAEEYLSQQLSRARRMGSSLAYVMVDLDHFKRVNDQYGHLMGDRVLVNFA 449 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP-----QKEIGF 461 + ++ +R+SD R GG+EF +IL D+T + A + E + I ++ F Sbjct: 450 RYLQGRLRRSDVIGRYGGEEFVVILPDTTKEHARFVIESMRMSFATINHNTEEDPLQVTF 509 Query: 462 SSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 S+GI A + D + KA+D+ LY KQ ++ Sbjct: 510 SAGIAAFPDIDDMTMLSKAADDALYDAKQQGRNK 543 >UniRef50_B5EIX9 Diguanylate cyclase n=2 Tax=Geobacter RepID=B5EIX9_GEOBB Length = 432 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 2/168 (1%) Query: 330 VRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQI 389 ++ + + + +D +TG+ NR+ LE + + + G + I D+D+ K I Sbjct: 253 LQELKQANALLQSQATTDPVTGILNRRKCCELLESAIMESKRYGLPLALIFFDVDRFKSI 312 Query: 390 NDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKR 449 NDT GH GD + LA + IRK+D R GG+EF +++ ++ + A L E+I R Sbjct: 313 NDTYGHDAGDSVLRELAGLVSGMIRKTDIFSRFGGEEFVLVVHNNDGRTARMLAEKIRSR 372 Query: 450 LQHIAP--QKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + ++ S G+ + +D+ K +D+ +Y K +R Sbjct: 373 VSQHSFIHVGQVTASFGVARLYPDDSAESLVKRADQAMYSAKHAGRNR 420 >UniRef50_Q1D817 HAMP domain/GAF domain/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D817_MYXXD Length = 645 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 8/173 (4%) Query: 332 MHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQIND 391 + RL+ + ++D +TG+ NR+ L +E L + + G+ + + +D+D K+IND Sbjct: 433 KNARLHAETVKLTMTDPLTGVPNRRHLFQRMELELARSNRFGTPLALLMVDVDHFKRIND 492 Query: 392 TLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ 451 GH+ GD + + ++ +RK D R GG+EF I+L + A ++ E++ + + Sbjct: 493 LAGHRVGDETLRRVCDVLRLRVRKVDTLARYGGEEFVILLPQTNKAEAMEVAEKLRRAVA 552 Query: 452 HIA-------PQKEIGFSSGIYAMKENDTL-HDAYKASDERLYVNKQNKNSRS 496 P + S G + + + +D LY +K+ +R+ Sbjct: 553 ESVELVQPGLPGNHVTVSIGASHFPSDASAQEELVDCADAALYFSKRTGRNRT 605 >UniRef50_A5F641 GGDEF family protein n=40 Tax=Gammaproteobacteria RepID=A5F641_VIBC3 Length = 512 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 65/383 (16%), Positives = 133/383 (34%), Gaps = 16/383 (4%) Query: 129 AFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNW--SFLQS 186 E R S +Y+ + V P + ++ + N Sbjct: 126 IIRYLREIQRQYQTISSFYISDRTGHYYHYTGILKQVSESNPNDAWFYRVKNSAPDKNFE 185 Query: 187 GSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLR 246 +I ID + ++ ++++ + L + A K + + + Sbjct: 186 VNIDIDTANSQQTVVFVNYKVFDFENRFLGVIGVGLSSDAVSALVEKYQKRYNRHIYFIN 245 Query: 247 NIFY-------------THDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDL 293 + R L LT G + + L Sbjct: 246 ELGEVTLHGSHHPGFDQIQQREGLKTLATQILTSPSVGASYYADGQKVYLNSRWVDEFQW 305 Query: 294 PGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFR-LYQNVSRENISDAMTGL 352 + + + ++ ++ AL +L + +M FR + + + D +TG Sbjct: 306 YIIVEQKDEFNHDIWFKATLGNLAISAFVALGVLGLAQMSFRGYQKRLEDMAVRDKLTGA 365 Query: 353 YNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQS 412 YNR++ ++ + + + ID+D KQ+ND GH GDL + + ++ Sbjct: 366 YNRQVFEELVDDAISLANKESHPLSLAVIDLDHFKQVNDNYGHPAGDLVLQRVVALCQRH 425 Query: 413 IRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKEND 472 I + R GG+EF ++L T Q A Q E I + A Q ++ S G+ ++N+ Sbjct: 426 IAQVGTLCRWGGEEFVVLLPHMTQQEAYQRMESIRAEIAMHASQPQVTVSIGVVQYQQNE 485 Query: 473 TLHDAYKASDERLYVNKQNKNSR 495 +L + +D+ +Y K ++ Sbjct: 486 SLLHLFNRADQAMYTAKSEGRNK 508 >UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJI0_9BACT Length = 750 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 10/206 (4%) Query: 300 SLSIDILYFITSSW--KSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKI 357 L + +T+ K ++ + + R Y + I+D +TGL+N Sbjct: 514 GLEVGATDVLTTPINPKELVVRVKALIAQKREFEAMLRAYHSARHRAITDGLTGLFNHAY 573 Query: 358 LTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSD 417 +L + + +SG + I +D+D+ K NDT GH+ G+ + LA+ +++ R+SD Sbjct: 574 FLEKLTREAELAGRSGRPLSVIMLDVDRFKHFNDTNGHETGNELLKDLARLMERCFRRSD 633 Query: 418 YAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE-------IGFSSGIYAMKE 470 R GG+EF ++L ++ AA L ER+ +R+ + S G+ AM Sbjct: 634 LLARYGGEEFVVLLPNTPKSQAAVLAERLRRRVAEYPFVGRESQPGGCLTVSLGVAAMPT 693 Query: 471 NDT-LHDAYKASDERLYVNKQNKNSR 495 + + + +D LY KQN +R Sbjct: 694 DTSDPKQLLELADRALYRAKQNGRNR 719 >UniRef50_B6BJC3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJC3_9PROT Length = 598 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 107/271 (39%), Gaps = 9/271 (3%) Query: 230 GQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSY 289 + D++ + D + + I L++ + Sbjct: 326 DKNVISSTTDLHGKITKASTAFCDISGYRKNELLGKNHNIVRHKEIPQTLYKELWETIKA 385 Query: 290 VHDLPGGIRVSLSIDILYFITSSWKSVLFW---ILTALILLNMVRMHFRLYQNVSRENIS 346 + G I+ Y++ S V I++ + + + R + +I+ Sbjct: 386 GNVWQGEIKNRHKNGSSYWVDVSISPVKNEKDEIISYTAIRHDITDKKR----IEELSIT 441 Query: 347 DAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLA 406 D +T LYNR L +L + ++ I ID+D K +NDT GHQ GD + A Sbjct: 442 DRLTQLYNRLKLDEIFAMKLATAGRYNTNFSVIIIDIDYFKLVNDTWGHQAGDDVLREFA 501 Query: 407 QAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQ--HIAPQKEIGFSSG 464 + IK + R++D R GG+EF I+ D+ A +L E++ + + + + S G Sbjct: 502 EIIKNNARETDIVGRWGGEEFLILSSDTDLDGAIKLSEKLREMVSLFNFSFAGYKTASFG 561 Query: 465 IYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 + + D K +DE LY K+N +R Sbjct: 562 VSSYHPGDDEKTMVKRADEALYRAKENGRNR 592 >UniRef50_D1AZG2 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZG2_SULD5 Length = 768 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 64/322 (19%), Positives = 120/322 (37%), Gaps = 18/322 (5%) Query: 181 WSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQ--DQRTKQNVMSLLTPVYVAGQLKGIVLL 238 W + + + + D + Y+ + ++ + + V ++ V+ Sbjct: 446 WMQMNAAPLYLHDNDNVSAVVLTLSDITNYRRSKYKLEKYLSMIDKHVIISTTDLKGVIT 505 Query: 239 DINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQY---VSYVHDLPG 295 ++++ + Y+ + + V D S + ++ + + + H Sbjct: 506 EVSEAFCKISGYSKEELIGANHSIVRHADVPSSVYEEMWKAIKSGLIWRGELKNRHKDGS 565 Query: 296 GIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNR 355 V I Y S ++ + + R V +I+D +TGLYNR Sbjct: 566 AYWVETIIAPRYDEDYS-------LIGYTAIRTDITDKKR----VEELSITDRLTGLYNR 614 Query: 356 KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK 415 L L + + I +D+DK K +NDT GHQ GD + A +K IR Sbjct: 615 LKLDELFAHHLSIARRHHTPFSIILLDIDKFKSVNDTYGHQVGDTILQEFALCVKAQIRS 674 Query: 416 SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQ--KEIGFSSGIYAMKENDT 473 D R GG+EF ++L +S + A+ L E++ + + S G+ E D Sbjct: 675 EDIFGRWGGEEFLLLLPNSPLENASLLAEKLRLCVASFSFSQVGMKTASFGVATFHEGDD 734 Query: 474 LHDAYKASDERLYVNKQNKNSR 495 DE LY K+N ++ Sbjct: 735 EKSMMVRVDEALYRAKENGRNQ 756 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 15/235 (6%) Query: 276 INQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVL--FWILTALILLNMVRMH 333 + +++ Y+ V+ + + +Y + + V + +L+ V Sbjct: 85 LKSPVFIIWEQRPYLFKFGCNRPVTSAAEFMYQNVTMFPIVDKRGNVERFCMLVYDVTEQ 144 Query: 334 F-------RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 L + + + D +TGLYNR+ ++ + V+ + +D+D Sbjct: 145 ALGKRGMEHLNEELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRREKPSTALMLDIDHF 204 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K+INDT GHQ GD I +LA IK+ +R++D A R GG+EF IIL DS+ + A + ERI Sbjct: 205 KRINDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSSVEDAKIVAERI 264 Query: 447 EKR-----LQHIAPQKEIGFSSGIYAMKEN-DTLHDAYKASDERLYVNKQNKNSR 495 + ++H S G+ + + +D+ LY K+N ++ Sbjct: 265 RQLAQRLVVEHEGESISFTVSLGLAQFSPDFKGAMAWLECADQALYEAKENGRNQ 319 >UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales RepID=D0J6R3_COMTE Length = 521 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 9/221 (4%) Query: 284 FQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRE 343 ++ V I + L +I + + ++ ++ Sbjct: 274 LPFIIMVAKAHSDIFTAWRKRALIIACLMGVLTAAFIGLSFAFVTQLQRRIHAESELALL 333 Query: 344 NISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAIT 403 +D +TGL NR+ L L+Q + ++ S + +D+D+ K NDT GHQ GD I Sbjct: 334 ARTDGLTGLNNRRRLDEMLDQEWHRARRNHSIFSLLFVDIDRFKVYNDTYGHQAGDDVIA 393 Query: 404 LLAQAIKQSIRK-SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKE---- 458 +AQ I +IR+ D A R GG+EF ++L D++ + A+ L E I + ++ + Sbjct: 394 TIAQCIGDNIRRPGDIAARYGGEEFIVVLPDTSLEGASCLAESIRAAVSQLSVEHSGSEF 453 Query: 459 --IGFSSGIYAMKENDTLH--DAYKASDERLYVNKQNKNSR 495 I S G A + +++DE LY K ++ Sbjct: 454 GYITVSIGCAAWEPEHDADVASVIRSADEALYKAKTTGRNK 494 >UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID=A1WD95_ACISJ Length = 382 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 12/206 (5%) Query: 302 SIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQ------NVSRENISDAMTGLYNR 355 ++ Y + + LT + R+ + + + + D +TGL NR Sbjct: 172 ALSAAYLVMIAVVLASSTFLTTRVHSARARLRSQQRELAAAVEQIRELAVRDELTGLPNR 231 Query: 356 KILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRK 415 + + + + +S ++ +D+D K +NDT GH GD+A+ AQ + +R Sbjct: 232 RYMLEMMRLEHARAQRSRQPLLLAQLDLDHFKAVNDTHGHAAGDVALQSFAQTVHGCVRA 291 Query: 416 SDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAP------QKEIGFSSGIYAMK 469 SD R GG+EF +++ ++ P +L ER+ + Q + S G+ + Sbjct: 292 SDLLARWGGEEFLLLMANTHPADGTRLLERVRATVAATPVALPGGTQLSLTVSVGLAELA 351 Query: 470 ENDTLHDAYKASDERLYVNKQNKNSR 495 ++ + +D LY K+ +R Sbjct: 352 HGESTAALLQRADAALYGAKRLGRNR 377 >UniRef50_B8GSA4 Putative diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSA4_THISH Length = 778 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 119/289 (41%), Gaps = 19/289 (6%) Query: 226 VYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQ 285 VY V I + L N+ + PL + +D R I+ + + Sbjct: 486 VYALVDNLASVTFLIKQRGLSNLKVSGQLPLGFDLAMGVRSDWPELRTILQKGLDAISQE 545 Query: 286 YVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQ------- 338 ++D + V D+ +L L +L + R+H RL + Sbjct: 546 ERDAIYDKWVRLEVETRPDLSKVAPYFIALLLILALVSLDAWRVRRLHRRLQEANRQLHL 605 Query: 339 ----------NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQ 388 + +I+D +TG YNR L L+Q+ + V + D+D K+ Sbjct: 606 AEQRLIEQNHQLELLSITDKLTGAYNRLKLDEVLQQQHALAERYKRPVSVVMFDLDDFKR 665 Query: 389 INDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEK 448 +NDT GH GDL + + + RKSD R GG+EF +I ++T AA L R+ Sbjct: 666 VNDTHGHHAGDLILRRFTELVLSLARKSDVFGRWGGEEFLLICPETTALDAADLANRVRV 725 Query: 449 RLQHIAPQ--KEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 +L I + SSGI ++ + +++D +D+RLY KQ +R Sbjct: 726 QLAEIVFEEVGTQTVSSGIAELRPSQSVNDWISHADKRLYQAKQQGRNR 774 >UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VVS2_9CYAN Length = 314 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 91/176 (51%), Gaps = 6/176 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 L +V+ H +L + + I+D +TGL+NR+ Q + + + + ID+D Sbjct: 135 LNRLVKEHEKLANLLRKLAITDPLTGLWNRRHFLTVAYQEFNRASRYKRFMSILMIDIDH 194 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQIND GH GD + +A++I S+R++DY R GG+EF +L ++ A ++ ER Sbjct: 195 FKQINDEYGHTMGDEVLKGVAKSIVGSLREADYCGRFGGEEFVTLLPETDSSGAVRVAER 254 Query: 446 IEKRLQHIAPQK-----EIGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 + KR++ I ++ + G+ + + +D + + +++ LY K +R Sbjct: 255 LRKRMEQITIGIGDKQVQMTVTVGVASYQLDDANIEVIIQRANKALYHAKSQGYNR 310 >UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS30_DESMR Length = 498 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 7/193 (3%) Query: 310 TSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKL 369 + K + + ++ L + + L+ V D +T ++NR+ L L++ Sbjct: 285 RALGKDQVQALYASINHLALALKNAALFNQVKIRADHDGLTRIHNRRAFDERLIDELRRH 344 Query: 370 VQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCI 429 + ++ + +D+D K IND GH GD + + + +++R +D+ R GG+EF + Sbjct: 345 QRYRHAMSLLMVDIDHFKGINDRYGHLVGDHVLREVGSILSETLRSTDFTARYGGEEFVV 404 Query: 430 ILVDSTPQIAAQLPERIEKRLQHIAP-----QKEIGFSSGIYAMKEN--DTLHDAYKASD 482 IL + + A L ER+ + I S G+ A++ D + +D Sbjct: 405 ILPQTAEEQARILAERLRGAIAEARFVHDGEDFSITVSIGVSALQPGALTRRKDLLEKAD 464 Query: 483 ERLYVNKQNKNSR 495 + LY K ++ Sbjct: 465 KALYQAKHLGRNQ 477 >UniRef50_B8FB82 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB82_DESAA Length = 309 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 101/254 (39%), Gaps = 5/254 (1%) Query: 247 NIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDIL 306 I L+ + + ++I + ++ + + Sbjct: 44 EILKNRQVDLVVTDIELPDIQGLELTNLITKEHGADVIVMTGFGEQYTYEDAIEQGASDF 103 Query: 307 YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL 366 + + I L + +L + ++D +T LYN + L+ + Sbjct: 104 IIKPIKFSELSLRIKRVLRERAFDQEREKLMGKLQELAVTDGLTKLYNSRHFYETLDVEI 163 Query: 367 QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE 426 ++ + G + + D+DK K NDT GH EGD A+ +A+A++ IR +D A R GG+E Sbjct: 164 RRARRYGRPLSLLLFDIDKFKNFNDTYGHIEGDRALARIARAVQDCIRLTDTAFRYGGEE 223 Query: 427 FCIILVDSTPQIAAQLPERIEKRLQHI-----APQKEIGFSSGIYAMKENDTLHDAYKAS 481 F +++ ++ + A + +R+ + + + + S G+ + L D K Sbjct: 224 FTVLMPETDEEEALGVGQRVCEEARDLVHRVDGKDVHLTISVGVTQCIPGEDLADMVKRV 283 Query: 482 DERLYVNKQNKNSR 495 DE +Y K+ ++ Sbjct: 284 DEAMYKAKRAGGNQ 297 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 7/177 (3%) Query: 326 LLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDK 385 +++ ++ +L +++ ++I D++TGLYNR+ + L++ + + V I ID+D Sbjct: 937 HISLALVNLQLRESLESQSIKDSLTGLYNRRYMEESLKREINLAQRKQHPVGLIMIDVDH 996 Query: 386 LKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER 445 KQ ND GH+ GDL + + + ++R D A R GG+EF +IL +++ + Q E+ Sbjct: 997 FKQFNDNFGHKAGDLILHEVGNFLMANVRSGDIACRYGGEEFLLILPEASLSDSQQRAEQ 1056 Query: 446 IEKRLQHIAPQK------EIGFSSGIYAMKENDT-LHDAYKASDERLYVNKQNKNSR 495 I K ++ + Q+ + S G+ + +++D LY K R Sbjct: 1057 IRKGIKQLNFQQYNSAFTSLTVSIGVACFPAHGKQGETLIQSADMALYQAKNQGRDR 1113 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 10/207 (4%) Query: 295 GGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYN 354 G + V + F K + ++ RL + I D +TGLYN Sbjct: 126 GSLSVGRVMSSKPFTEEDGKILRSLAFIFSFIVKEELEKKRLLEK----AIIDHLTGLYN 181 Query: 355 RKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIR 414 R L + + + + G + I D+D KQ+NDT GHQ GD + A + ++R Sbjct: 182 RFYLEEAGAREIARAKRYGFPISLIMFDLDNFKQVNDTYGHQVGDRVLVKFASIVSSNVR 241 Query: 415 KSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQK-----EIGFSSGIYAMK 469 +D +R GG+EF ++L + P+ A ++ ERI + + + + S+GI Sbjct: 242 STDMPVRYGGEEFVVLLPHTYPEEAVKVAERIREEFEKFLFRFEGEVMRLTVSAGISFCN 301 Query: 470 END-TLHDAYKASDERLYVNKQNKNSR 495 + +L + + +D+ +Y K+ +R Sbjct: 302 SGECSLGELIQMADKAMYEAKEKGKNR 328 >UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXI5_MARAV Length = 523 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 100/249 (40%), Gaps = 8/249 (3%) Query: 255 PLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITS-SW 313 L +T T + Q L + + P G+ + D+ + Sbjct: 269 SLGANLSVLTETVLPVRSYDLPAQMCFFLRIESARSGNRPEGVLMLERPDLPPVVKDYGI 328 Query: 314 KSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSG 373 V+ W+ ++ + + L + R + D++TGL NR+ + +S Sbjct: 329 ARVISWVYQSVEKIGITLSGLALRAELQRFSYEDSLTGLKNRRYFDELFRHEREVSARSD 388 Query: 374 SSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVD 433 + + D+D K ND GH+ GD A+ ++ + R SD R GG+EF +++ Sbjct: 389 RPLCLLIFDIDHFKLFNDCHGHEAGDQALRMVGDVLATCFRGSDTVCRYGGEEFSVLMPG 448 Query: 434 STPQIAAQLPERIEKRLQHIAPQKE------IGFSSGIYAMKEN-DTLHDAYKASDERLY 486 ++ A Q E++ + + + S+GI +EN + ++A+D+ LY Sbjct: 449 ASLDEARQRAEQLRAAISAEPVEHRGENLGSLTISAGIACWRENCPEFDELFRAADQALY 508 Query: 487 VNKQNKNSR 495 K+ +R Sbjct: 509 QAKETGRNR 517 >UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB67_9DELT Length = 752 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 6/175 (3%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKL 386 + + + R+YQ++ +D +TGL N + LEQ ++G I D+D Sbjct: 570 VGVSMQNARMYQSMEERATTDGLTGLTNHRAFQERLEQLHALSERTGQKFSIILTDIDHF 629 Query: 387 KQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERI 446 K +NDT GH GD + +A + RK D R GG+EF ++L D+ + AA R+ Sbjct: 630 KSVNDTYGHPVGDAVLKRVAAIFTRRARKVDIVARYGGEEFVLVLPDTDAEGAAVFANRL 689 Query: 447 EKRLQHIAP-----QKEIGFSSGIYAMKENDTL-HDAYKASDERLYVNKQNKNSR 495 + + + S G+ + T H+ + +D+ LY K++ +R Sbjct: 690 REEIAAQTITSDNGSFSVTLSLGVAEFPRDSTKRHELIELADQALYYCKEHGRNR 744 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 7/186 (3%) Query: 317 LFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSV 376 L + + + + + + + I+D +TGL NR+ L Q +++ + + V Sbjct: 391 LNALELLAATVAVALHNAFRFAQIQSQAITDNLTGLANRRHFLQVLHQEMERNRRYHTPV 450 Query: 377 MFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTP 436 ID+D KQINDT GH GD + +A+ +Q +R D R GG+EF +IL ++T Sbjct: 451 SIAMIDVDHFKQINDTFGHIAGDYVLREIARRCRQQLRDVDVLARYGGEEFGLILPETTY 510 Query: 437 QIAAQLPERIEKRLQHIAP-----QKEIGFSSGIYAMKEN--DTLHDAYKASDERLYVNK 489 + A + ER+ L Q S G+ + +D LY+ K Sbjct: 511 EQALKATERLRTVLATTPIMIDGRQINPTISIGVASFHPTVYPDPSSLIADADRALYLAK 570 Query: 490 QNKNSR 495 Q +R Sbjct: 571 QQGRNR 576 >UniRef50_A4G5V3 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5V3_HERAR Length = 519 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 64/336 (19%), Positives = 134/336 (39%), Gaps = 26/336 (7%) Query: 171 VNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAG 230 +N++YF+ ++ + IG + +G ++ + + ++ PVY Sbjct: 190 INMQYFS----AYYKDFDIGKAGAIVLTTDSGTLLVRRPFDEAVIGGDI--SNGPVYQFY 243 Query: 231 QLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYV 290 + +G I N+ + L R+ + I + QS D + + Sbjct: 244 KRQGSSGTAILTANIDRTERIYSYRHLDRYPLL----------IAVAQSTDEVLESWRNS 293 Query: 291 HDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMT 350 + + + + L R ++ + D++T Sbjct: 294 TMRFAFFSAMVLLLLWLLGARLVHQITVRERAQSELRTARDDLERSNGELAALALLDSLT 353 Query: 351 GLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIK 410 GL NR+ L+ + +++ +S+ I +D+D K+ ND GH +GD + +++ +K Sbjct: 354 GLANRRRFDAALDDEFARAMRNQTSLALIMLDVDHFKKYNDRYGHPQGDECLKEISKILK 413 Query: 411 -QSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA------PQKEIGFSS 463 + R D R GG+EF I+L + AA + ER+ +Q + P + S Sbjct: 414 TATARTGDLVARYGGEEFVILLPGTDRAGAAAVAERVRLAIQALNMEHAETPDGIVTASL 473 Query: 464 GIYAM---KENDTLHDAYKASDERLYVNKQNKNSRS 496 GI A+ ++ ++ A+D+ LY K++ ++S Sbjct: 474 GIAALIPQRQQNSPQQLVHAADQALYKAKEDGRNQS 509 >UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D915_LARHH Length = 879 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 8/177 (4%) Query: 327 LNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQS--GSSVMFIAIDMD 384 LN + ++ ++ +D +TGL NR+ + L + + + + +D+D Sbjct: 688 LNDISERKAHEDDLVKQASTDGLTGLANRRSWLVHANRELTRCRRYPDEADCAVVMLDID 747 Query: 385 KLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPE 444 K++ND+ GH GD + LA+ ++ +R++D R+GG+EF I+L ++ A E Sbjct: 748 HFKRVNDSHGHAVGDQVLQELARRMQAGLRETDCLGRMGGEEFAILLPQTSQDGACLFAE 807 Query: 445 RIEKRLQHIAPQKE-----IGFSSGIYAMKEND-TLHDAYKASDERLYVNKQNKNSR 495 R+ +++ + E + S G+ M+ +D ++ A +D LY K +R Sbjct: 808 RLCRKIAGVPFATEAGALVVTISLGVSQMQSDDASVDCALARADGALYAAKSGGRNR 864 >UniRef50_Q0A6W8 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6W8_ALHEH Length = 382 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 86/163 (52%), Gaps = 6/163 (3%) Query: 339 NVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEG 398 + R+ D +TGL+NR+ LT ++E+ + +++G + + D+D+ K+IND GH G Sbjct: 210 RLYRQATRDPLTGLFNRRALTEQIERERARFLRTGRPLTVLLFDLDRFKRINDHHGHLVG 269 Query: 399 DLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH------ 452 D + + A ++Q++R +D+ R GG+EF L ++T + A + ER+ + ++ Sbjct: 270 DRVLQVFANVVQQNLRTTDHFGRWGGEEFLAALPETTSEQARVVAERVRQACENERLTLA 329 Query: 453 IAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495 P S G+ + ++TL + DE LY K +R Sbjct: 330 EGPSLGFTTSIGVATLHRDETLDSLFNRVDEALYNAKAYGRNR 372 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.143 0.432 Lambda K H 0.267 0.0436 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,647,816,964 Number of Sequences: 3077464 Number of extensions: 145364287 Number of successful extensions: 440075 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 23386 Number of HSP's successfully gapped in prelim test: 2136 Number of HSP's that attempted gapping in prelim test: 376589 Number of HSP's gapped (non-prelim): 28346 length of query: 496 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 363 effective length of database: 631,093,644 effective search space: 229086992772 effective search space used: 229086992772 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 95 (41.1 bits)