Phyre 2 alignment of Q46898 with c2z5vA_

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Job Description | Q46898
Confidence | 8.57% | Date | Thu Jan 5 12:35:38 GMT 2012
Rank | 27 | Aligned Residues | 31
% Identity | 16% | Template | c2z5vA_
PDB info | PDB header:immune system | Chain: A: PDB Molecule:myeloid differentiation primary response protein | PDBTitle: solution structure of the tir domain of human myd88
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | T | V | A | L | W | L | T | P | H | A | T | M | V | I | S | E | L | E | K | A | V | L | K | P | R | Y | T | P | Y | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | D | A | F | I | C | Y | C | P | S | D | I | Q | F | V | Q | E | M | I | R | Q | L | E | Q | T | N | Y | R | L | K | L
Template Known Secondary structure |  |  | S |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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