Phyre 2 alignment of Q46898 with c2rp4C_

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Job Description | Q46898
Confidence | 1.49% | Date | Thu Jan 5 12:35:38 GMT 2012
Rank | 90 | Aligned Residues | 25
% Identity | 12% | Template | c2rp4C_
PDB info | PDB header:transcription | Chain: C: PDB Molecule:transcription factor p53; | PDBTitle: solution structure of the oligomerization domain in dmp53
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | A | S | F | T | V | A | L | W | L | T | P | H | A | T | M | V | I | S | E | L | E | K | A | V | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | G | D | Y | R | L | A | I | T | C | P | N | . | K | E | W | L | L | Q | S | I | E | G | M | I | K
Template Known Secondary structure |  | T | T | S | S |  |  |  |  |  |  | S | S | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 328 | . | 330 | . | . | . | . | . | . | . | . | . |  | 340 | . | . | . | . | . | . | . | . | . | 350 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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