BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (71 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 146 2e-34 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 112 4e-24 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 103 2e-21 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 98 8e-20 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 95 8e-19 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 89 4e-17 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 88 7e-17 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 87 1e-16 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 85 6e-16 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 85 9e-16 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 84 1e-15 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 83 3e-15 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 82 4e-15 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 82 4e-15 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 81 8e-15 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 81 1e-14 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 80 2e-14 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 79 4e-14 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 79 4e-14 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 78 8e-14 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 78 9e-14 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 77 1e-13 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 77 1e-13 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 77 1e-13 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 77 2e-13 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 77 2e-13 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 77 2e-13 UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Ba... 77 2e-13 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 77 2e-13 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 77 2e-13 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 76 3e-13 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 76 3e-13 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 75 4e-13 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 75 5e-13 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 75 5e-13 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 75 7e-13 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 75 7e-13 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 75 7e-13 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 75 8e-13 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 75 8e-13 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 75 9e-13 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 75 9e-13 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 74 1e-12 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 74 1e-12 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 74 1e-12 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 74 1e-12 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 74 1e-12 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 74 2e-12 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 74 2e-12 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 74 2e-12 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 73 2e-12 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 73 2e-12 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 73 2e-12 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 73 3e-12 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 73 3e-12 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 73 3e-12 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 72 4e-12 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 72 4e-12 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 72 5e-12 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 72 5e-12 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 72 6e-12 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 72 7e-12 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 71 9e-12 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 71 1e-11 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 71 1e-11 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 71 1e-11 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 70 1e-11 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 70 2e-11 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 70 2e-11 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 70 2e-11 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 70 2e-11 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 70 2e-11 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 70 2e-11 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 70 3e-11 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 69 3e-11 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 69 3e-11 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 69 4e-11 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 69 5e-11 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 69 5e-11 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 69 5e-11 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 68 7e-11 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 68 8e-11 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 68 8e-11 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 68 1e-10 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 68 1e-10 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 67 1e-10 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 67 1e-10 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 67 1e-10 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 67 1e-10 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 67 2e-10 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 67 2e-10 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 67 2e-10 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 66 3e-10 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 65 4e-10 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 65 5e-10 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 65 6e-10 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 65 7e-10 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 65 7e-10 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 65 8e-10 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 65 8e-10 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 65 9e-10 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 64 1e-09 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 64 1e-09 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 64 2e-09 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 64 2e-09 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 64 2e-09 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 64 2e-09 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 64 2e-09 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 64 2e-09 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 64 2e-09 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 64 2e-09 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 63 2e-09 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 63 3e-09 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 63 3e-09 UniRef50_Q9RBP7 Cold shock protein 7.4 (Fragment) n=2 Tax=Rhodoc... 63 3e-09 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 63 3e-09 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 63 3e-09 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 63 4e-09 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 62 4e-09 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 62 4e-09 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 62 4e-09 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 62 4e-09 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 62 4e-09 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 62 4e-09 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 62 5e-09 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 62 6e-09 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 62 6e-09 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 62 6e-09 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 62 6e-09 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 62 6e-09 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 62 7e-09 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 62 8e-09 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 62 8e-09 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 61 9e-09 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 61 1e-08 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 61 1e-08 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 61 1e-08 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 61 1e-08 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 61 1e-08 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 61 1e-08 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 61 1e-08 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 60 1e-08 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 60 2e-08 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 60 2e-08 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 60 3e-08 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 59 4e-08 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 59 4e-08 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 59 5e-08 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 59 6e-08 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 59 6e-08 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 59 6e-08 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 59 7e-08 UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cel... 59 7e-08 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 58 7e-08 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 58 9e-08 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 58 9e-08 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 58 9e-08 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 58 1e-07 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 58 1e-07 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 58 1e-07 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 57 1e-07 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 57 1e-07 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 57 1e-07 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 57 2e-07 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 57 2e-07 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 57 2e-07 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 57 2e-07 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 57 2e-07 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 57 2e-07 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 57 2e-07 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 57 2e-07 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 57 2e-07 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 57 2e-07 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 56 3e-07 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 56 3e-07 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 56 4e-07 UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rh... 56 4e-07 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 56 4e-07 UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pe... 55 5e-07 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 55 5e-07 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 55 5e-07 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 55 6e-07 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 55 6e-07 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 55 7e-07 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 55 8e-07 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 55 8e-07 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 55 9e-07 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 54 1e-06 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 54 1e-06 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 54 1e-06 UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1... 54 1e-06 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 54 1e-06 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 54 1e-06 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 54 2e-06 UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radioba... 54 2e-06 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 54 2e-06 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 54 2e-06 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 54 2e-06 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 54 2e-06 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 53 3e-06 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 53 3e-06 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 53 3e-06 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 53 3e-06 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 52 4e-06 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 52 4e-06 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 52 5e-06 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 52 5e-06 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 52 6e-06 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 52 6e-06 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 52 7e-06 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 52 8e-06 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 52 8e-06 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 51 1e-05 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 51 1e-05 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 51 1e-05 UniRef50_UPI0001AF6C46 cold-shock DNA-binding protein family pro... 51 1e-05 UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmatace... 51 1e-05 UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodoco... 50 1e-05 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 50 2e-05 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 50 2e-05 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 50 2e-05 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 50 2e-05 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 50 2e-05 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 50 2e-05 UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript eviden... 50 2e-05 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 50 2e-05 UniRef50_D0L1T1 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 50 2e-05 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 50 2e-05 UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Pr... 50 2e-05 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 50 2e-05 UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 50 2e-05 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 50 2e-05 UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=B... 50 2e-05 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 50 3e-05 UniRef50_B8BT01 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 50 3e-05 UniRef50_UPI000169964E Cold-shock DNA-binding protein n=1 Tax=En... 50 3e-05 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 50 3e-05 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 50 3e-05 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 49 3e-05 UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Cl... 49 3e-05 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 49 4e-05 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 49 4e-05 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 49 5e-05 UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus Re... 49 5e-05 UniRef50_Q5L9T7 Cold shock-like protein n=5 Tax=Bacteroides RepI... 49 7e-05 UniRef50_B7VTL0 Putative uncharacterized protein n=2 Tax=Vibrio ... 49 7e-05 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 49 7e-05 UniRef50_Q2MF47 Putative cold shock protein n=1 Tax=Streptomyces... 48 7e-05 UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aroma... 48 7e-05 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 48 8e-05 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 71/71 (100%), Positives = 71/71 (100%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 Query: 61 GPAAANVIITD 71 GPAAANVIITD Sbjct: 61 GPAAANVIITD 71 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 53/68 (77%), Positives = 59/68 (86%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSNKMTGLVKWF+A KGFGFISP DGSKDVFVHFSAIQ ++Y+TL EGQ V FSIE G K Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 61 GPAAANVI 68 GP+A NV+ Sbjct: 61 GPSAVNVV 68 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 47/68 (69%), Positives = 57/68 (83%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ K+TGLVKWFN +KGFGFI+P DGSKDVFVHFSAIQ++ +RTL E Q+V FS E G K Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPK 60 Query: 61 GPAAANVI 68 GP+A NV+ Sbjct: 61 GPSAVNVV 68 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 46/66 (69%), Positives = 55/66 (83%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 +K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ+V F I +GAKGP Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 Query: 63 AAANVI 68 +AANVI Sbjct: 62 SAANVI 67 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 44/64 (68%), Positives = 50/64 (78%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ V F I+ G KGPA Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 Query: 64 AANV 67 A NV Sbjct: 63 AVNV 66 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 43/64 (67%), Positives = 49/64 (76%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWFNA+KGFGFI DG DVFVHFSAIQ D Y++L EGQ+V F I GA+GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDGD-DVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 65 ANVI 68 ANV+ Sbjct: 60 ANVV 63 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 36/65 (55%), Positives = 52/65 (80%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG+VKWFNA+KG+GFI+P DGSKD+F H+S I ++ Y++L E Q+VTF + G KGP+A Sbjct: 3 TGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAK 62 Query: 66 NVIIT 70 N+ ++ Sbjct: 63 NIKVS 67 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 43/62 (69%), Positives = 50/62 (80%), Gaps = 1/62 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNADKG+GFI+ DG+ DVFVHFSAIQ D ++TL EGQKVTF ES +GP AAN Sbjct: 4 GTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 67 VI 68 V+ Sbjct: 63 VV 64 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 41/61 (67%), Positives = 47/61 (77%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNA+KG+GFI+ DGS DVFVHFSAIQ D Y+TL EGQ VTF +E +GP A N Sbjct: 4 GTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAVN 62 Query: 67 V 67 V Sbjct: 63 V 63 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 39/67 (58%), Positives = 49/67 (73%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSN+ TG VKWFN +KGFGFI+P G D+FVHF AI++D +++L EGQ V+F E G K Sbjct: 22 MSNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQK 81 Query: 61 GPAAANV 67 G AA V Sbjct: 82 GMQAAQV 88 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 TG VKWFN++KGFGFI V+G DVFVHFSAIQ D ++TL EGQ+V+F I G +GP A Sbjct: 2 QTGKVKWFNSEKGFGFIE-VEGGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQA 60 Query: 65 ANV 67 ANV Sbjct: 61 ANV 63 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNA+KGFGFI +G DVFVHFSAIQ D +++L EGQ VTF +E G +GP AAN Sbjct: 4 GTVKWFNAEKGFGFIERENGD-DVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAAN 62 Query: 67 V 67 V Sbjct: 63 V 63 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 50/64 (78%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 +TG VKWFN++KGFGFI DG+ DVFVHFSAI D +++L EGQ+V+F +E G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 65 ANVI 68 NV+ Sbjct: 62 KNVV 65 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 37/61 (60%), Positives = 48/61 (78%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KGFGFI +G DVFVH+SAIQ+ ++TL+EGQ+V+F +++G KGPAA N Sbjct: 28 GKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAVN 86 Query: 67 V 67 V Sbjct: 87 V 87 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWF+ +KG+GFI+ +G DVFVHFSAIQ++ ++TL EGQ V F I GA+GP A Sbjct: 1 MVGKVKWFSPEKGYGFIAR-EGGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 65 ANVIIT 70 ANVI T Sbjct: 60 ANVIKT 65 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 1/62 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNA+KGFGFI V+G DVFVHFSAI + Y++L EGQ V F + G +GP AAN Sbjct: 4 GTVKWFNAEKGFGFIE-VEGENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAAN 62 Query: 67 VI 68 V+ Sbjct: 63 VV 64 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNADKGFGFI+ +GS DVFVHFSAIQ D +++L EGQ V F +E +GP A N Sbjct: 4 GTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAVN 62 Query: 67 V 67 V Sbjct: 63 V 63 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 36/62 (58%), Positives = 42/62 (67%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNA+KGFGFI G DVF HFS I D YR L EGQ+V+F + G KGP A N Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 67 VI 68 ++ Sbjct: 64 IV 65 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 41/71 (57%), Positives = 48/71 (67%), Gaps = 2/71 (2%) Query: 1 MSNKM-TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 MS ++ +G+VKWFN +KGFGFI +G DVFVHF AI RTL EGQKVTF + G Sbjct: 28 MSGQLVSGIVKWFNDEKGFGFIER-EGGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQ 86 Query: 60 KGPAAANVIIT 70 KGP A NV I Sbjct: 87 KGPQAENVSIV 97 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 42/64 (65%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI+ DG DVF H +AIQ D +RTL EGQKV F G KG A Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAE 62 Query: 66 NVII 69 NV + Sbjct: 63 NVRV 66 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 35/63 (55%), Positives = 45/63 (71%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 TG VKWFN KGFGFI+P G +D+F HFSAI + ++TL EGQKV+F + G KG A Sbjct: 2 QTGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQA 61 Query: 65 ANV 67 +N+ Sbjct: 62 SNI 64 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/63 (57%), Positives = 47/63 (74%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWF+A KG+GFI+ DG DVFVHFSAI+ + +++L +G KV F I +G KGP AA Sbjct: 25 TGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQAA 84 Query: 66 NVI 68 V+ Sbjct: 85 KVV 87 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 + G VKWFNA+KG+GFI DG+ DVFVH+SAI+ D ++TL EGQKV F + KGP A Sbjct: 2 VRGKVKWFNAEKGYGFIEREDGT-DVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQA 60 Query: 65 ANV 67 + V Sbjct: 61 SKV 63 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/61 (59%), Positives = 44/61 (72%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNA+KG+GFI+P D S DVFVHFSAIQ + ++ L E +V F + G KG AAN Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 67 V 67 V Sbjct: 64 V 64 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/63 (55%), Positives = 42/63 (66%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 +G+VKWFNA+KGFGFI G DVF H+S I +R L EGQKV F I G KGP A Sbjct: 3 SGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAE 62 Query: 66 NVI 68 N++ Sbjct: 63 NIV 65 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQ-NDNYRTLFEGQKVTFSIESGAKGPAA 64 TG VKWFN++KGFGFI V G DVFVHF+AIQ N+ + L EGQKV F +E G KG A Sbjct: 3 TGTVKWFNSEKGFGFIE-VPGENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQA 61 Query: 65 ANVI 68 ANV+ Sbjct: 62 ANVV 65 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/63 (57%), Positives = 43/63 (68%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNA+KGFGFI+P D DVFVH+S IQ ++TL E +V F I GAKGP A Sbjct: 4 GTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQATG 63 Query: 67 VII 69 V + Sbjct: 64 VTL 66 >UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Bacteria RepID=CSPA_YEREN Length = 46 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/46 (78%), Positives = 43/46 (93%) Query: 15 DKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 DKGFGFI+P DGSKDVFVHFSAIQ+++++TL EGQKV FSIE+GAK Sbjct: 1 DKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 33/64 (51%), Positives = 45/64 (70%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG V+WFNA++GFGF++P DGS D+FVH S I D +R L EGQ+V+F++ G A Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQAR 114 Query: 66 NVII 69 +V I Sbjct: 115 DVRI 118 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 34/62 (54%), Positives = 43/62 (69%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFN KGFGFI P DG +D+F H+S IQ + YR+L GQ+VTF ++ G KG A Sbjct: 3 VGKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAE 62 Query: 66 NV 67 N+ Sbjct: 63 NI 64 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI G DVF HFSAI +D ++TL EGQ+V F++ G KGP A Sbjct: 5 TGSVKWFNEAKGFGFIEQESGP-DVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAE 63 Query: 66 NVII 69 N++ Sbjct: 64 NIVC 67 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MS + G+VKWFN KGFGFI D +D+FVHF AIQ D YR+L +G+KV FS+ G K Sbjct: 1 MSAREQGIVKWFNDSKGFGFIQR-DSGEDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDK 59 Query: 61 GPAAANV 67 G A V Sbjct: 60 GLQAEEV 66 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 3 NKM-TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 NKM TG VKWFN KGFGFI+P +G DVF HFS I +R+L E Q+V+F I G KG Sbjct: 42 NKMATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKG 101 Query: 62 PAAANV 67 A+N+ Sbjct: 102 KQASNI 107 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 35/62 (56%), Positives = 49/62 (79%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VK+FNA+KG+GFI+ ++G +D+FVH+SAI D Y+TL EGQ+V+F + G +G AA Sbjct: 3 TGKVKFFNAEKGYGFIT-IEGGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAA 61 Query: 66 NV 67 NV Sbjct: 62 NV 63 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 3/66 (4%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG--AKGPAA 64 G VKWFNA+KG+GFI +GS+DVF HFSAIQ ++ L EG +V F IE G KGP A Sbjct: 4 GKVKWFNAEKGYGFIE-TEGSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 65 ANVIIT 70 N+++T Sbjct: 63 RNIVVT 68 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWF+ KG+GFI DG DVFVHFSAI+ + ++TL EGQ+V F+I G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 65 ANVI 68 A+V+ Sbjct: 60 ADVV 63 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MS +M G+VKWFN KGFGFI+P G D+FVHF AIQ +++L EGQKVTF G K Sbjct: 1 MSERMNGIVKWFNDAKGFGFITPESGP-DLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQK 59 Query: 61 GPAAANV 67 G A V Sbjct: 60 GMQADQV 66 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWFN KGFGFIS DG KD F+HFS I ++T+ EG++V F IE G KGP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 65 ANVI 68 NV+ Sbjct: 60 TNVV 63 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFNA+KG+GFI+ DG KDVFVH+S+I ++ ++TL EGQ VT+ + +G A Sbjct: 23 TGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQAN 81 Query: 66 NVIITD 71 NV + D Sbjct: 82 NVTVVD 87 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 34/61 (55%), Positives = 41/61 (67%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 + G VKWFN KG+GFI+P G KDVFVH SA+Q R+L EGQ++ F IE G AA Sbjct: 33 LHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRAA 92 Query: 65 A 65 A Sbjct: 93 A 93 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 35/67 (52%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWF++ KG+GFI+ +G DVFVH+SAI+ + ++TL EGQ V F I+ G KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 65 ANVIITD 71 A+V + + Sbjct: 60 AHVKVVE 66 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 34/63 (53%), Positives = 41/63 (65%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G KG A+ Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 66 NVI 68 ++ Sbjct: 63 LIV 65 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/65 (56%), Positives = 42/65 (64%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 N TG VKWFN KGFGFI+ G +DVF H +AI D +RTL EGQKV F + G KG Sbjct: 33 NMATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGL 92 Query: 63 AAANV 67 A NV Sbjct: 93 QAQNV 97 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 K G+VKWFN KG+GFI G +DVFVHFSAIQ+ Y+TL EG+ V F + G KG Sbjct: 21 KENGVVKWFNGAKGYGFIQRSTG-EDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 64 AANVI 68 AANV+ Sbjct: 80 AANVV 84 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 46/64 (71%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG--AKGPA 63 TG VK+FNA KGFGFI+P +G KDVFVH SA++ R+L +GQKV+F +E KGP Sbjct: 4 TGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGPK 63 Query: 64 AANV 67 A N+ Sbjct: 64 AVNL 67 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/63 (53%), Positives = 41/63 (65%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G KG A+ Sbjct: 26 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNHAS 85 Query: 66 NVI 68 ++ Sbjct: 86 VIV 88 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 2/67 (2%) Query: 2 SNKMT-GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 S KM+ G VKWFNA KGFGFI+ +G+ DVFVHFSAI+ + Y+ L EG +V F + G K Sbjct: 64 SYKMSEGTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNK 122 Query: 61 GPAAANV 67 GPAA NV Sbjct: 123 GPAADNV 129 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + TG VKWFN +KGFGF+S D DVFVH+ AI RTL EGQKV+FS+ G KG Sbjct: 5 QHTGTVKWFNDEKGFGFLSR-DNDSDVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLL 63 Query: 64 AANV 67 AANV Sbjct: 64 AANV 67 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 46/64 (71%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S + TG VKWF+ KGFGFI+P DG +D+FVH ++I++D +RTL EG+ V F+++ G G Sbjct: 4 SKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDG 63 Query: 62 PAAA 65 A Sbjct: 64 RTKA 67 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/63 (58%), Positives = 43/63 (68%), Gaps = 1/63 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KGFGFI +G +DVFVH S I +++L EG KVTF IE G KGPAA N Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 67 VII 69 V + Sbjct: 63 VTV 65 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 33/63 (52%), Positives = 44/63 (69%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 TG+VKWFN KGFGFI P G D+F HFS I+ D +++L E Q+V F +++G KG A Sbjct: 19 QTGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQA 78 Query: 65 ANV 67 AN+ Sbjct: 79 ANI 81 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 73.2 bits (178), Expect = 2e-12, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 46/64 (71%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S ++ G VKWF+A KGFGFI+P DG +D+FVH S++++D YR+L +G V FS+ SG G Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDG 62 Query: 62 PAAA 65 A Sbjct: 63 RTKA 66 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSN+ G VKWFN KGFGFI+P G+ D+FVHF +IQ +++L EGQKV+F + +G K Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQK 59 Query: 61 GPAAANVII 69 G A V + Sbjct: 60 GLQADEVQV 68 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MS + +G VKWFN +KGFGFI+P G D+FVHF AIQ + +++L EGQKVTF G K Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESGP-DLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQK 59 Query: 61 GPAA 64 G A Sbjct: 60 GMQA 63 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 33/62 (53%), Positives = 42/62 (67%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI+P G D+F HFS +Q + +++L EGQKV + G KGPAA Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 66 NV 67 + Sbjct: 122 KI 123 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 33/62 (53%), Positives = 40/62 (64%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G KG A+ Sbjct: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 Query: 67 VI 68 ++ Sbjct: 64 IV 65 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + TG VKWFN KG+GFI +G+ DVFVH+ AI+ D +R+L EGQ+V FS+ G K Sbjct: 68 MAERETGTVKWFNDAKGYGFIQRGNGA-DVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQK 126 Query: 61 GPAAANV 67 G A +V Sbjct: 127 GLQAEDV 133 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/60 (58%), Positives = 41/60 (68%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN+ KGFGFI+P G+KDVFVH SA++ L + QKVTF IE G G AA Sbjct: 55 TGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGREAA 114 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 34/63 (53%), Positives = 42/63 (66%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 + G VKWFN KGFGFI P G +DVF HFSAI D +RTL +G +V+F + G KG A Sbjct: 2 VNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKLA 61 Query: 65 ANV 67 N+ Sbjct: 62 QNI 64 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 33/63 (52%), Positives = 44/63 (69%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWF+ DKG+GFI+ D + DVFVHF+ IQ + ++TL +GQKV F + KGP A N Sbjct: 5 GTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRAKN 64 Query: 67 VII 69 V + Sbjct: 65 VRV 67 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 71.6 bits (174), Expect = 6e-12, Method: Composition-based stats. Identities = 32/63 (50%), Positives = 45/63 (71%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 +++TG VKWFN KGFGFI+P DG D+FVH S+I+++ +R+L EG+ V F +ES G Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGR 61 Query: 63 AAA 65 A Sbjct: 62 TKA 64 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFN +KG+GFI+P G+ D+FVHF AI+ + +++L EGQKVTF G K Sbjct: 1 MAERQNGTVKWFNDEKGYGFITPESGA-DLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQK 59 Query: 61 GPAAANVIIT 70 G A V + Sbjct: 60 GLQADQVQVV 69 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +M G VKWFN KG+GFIS G KDVFVH+S + + +++L EG +V F + GAKGP Sbjct: 19 EMKGTVKWFNNQKGYGFISDESG-KDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 64 AANV 67 A NV Sbjct: 78 ATNV 81 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN DKGFGFI +G +D+FVHF A+ + + L EGQKV + I G KGP Sbjct: 77 REVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQ 135 Query: 64 AANVIITD 71 A V+I D Sbjct: 136 AEQVVILD 143 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M ++ G VKWFN +KG+GFI G KDVFVH SAI +TL EGQKV + GAK Sbjct: 1 MGTQVEGTVKWFNEEKGYGFIEQ-KGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAK 59 Query: 61 GPAAANV 67 G A +V Sbjct: 60 GLQAEDV 66 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/60 (51%), Positives = 43/60 (71%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN+ KGFGFI+P DG KDVFVH SA++ + L + QK+ + ++SG G ++A Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSA 77 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/63 (52%), Positives = 43/63 (68%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KG+GFI +G +D+F H+SAI D Y+TL GQ+V+F I G KG A Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 66 NVI 68 N++ Sbjct: 104 NIV 106 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/50 (62%), Positives = 38/50 (76%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSI 55 +G VKWFN+ KGFGFI P DG+ DVFVH SA++ R+L EGQKVT+ I Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDI 52 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 2/69 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQN--DNYRTLFEGQKVTFSIESG 58 M+ + G VKWFN +KG+GFI +G KDVFVHF + +L EGQKVTF + G Sbjct: 1 MAELLDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEG 60 Query: 59 AKGPAAANV 67 KGP A NV Sbjct: 61 QKGPQAENV 69 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFN +KG+GFI+P G D+FVHF AI+ + +++L EGQ+VTF G K Sbjct: 97 MAERQKGTVKWFNDEKGYGFITPESGP-DLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQK 155 Query: 61 GPAAANV 67 G A V Sbjct: 156 GMQADKV 162 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 + G VK+FN DKGFGFI+ DG DVFVHFS IQ D ++TL EGQ V++ ++ ++G A Sbjct: 26 LNGTVKFFNVDKGFGFIAGQDGV-DVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQA 84 Query: 65 ANVI 68 NV+ Sbjct: 85 INVV 88 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 2/67 (2%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAI--QNDNYRTLFEGQKVTFSIESGAKGP 62 +TG VKWF+ +KG+GF++ D DVFVHFSAI ++TL +GQ+V F ++ +KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 63 AAANVII 69 A NV + Sbjct: 63 RAKNVRV 69 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 69.7 bits (169), Expect = 2e-11, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G VKWFN KGFGFIS D DVFVHF AI+ + +R L EGQ+V F+I KG Sbjct: 172 AGREAGTVKWFNTSKGFGFISR-DSGDDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKG 230 Query: 62 PAAANVI 68 A +V+ Sbjct: 231 LQAEDVV 237 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/63 (55%), Positives = 42/63 (66%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWFN +KG+GFIS +G DVFVHFSAI + Y+TL EGQ V F + +G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENGD-DVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 65 ANV 67 NV Sbjct: 60 VNV 62 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 30/50 (60%), Positives = 37/50 (74%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSI 55 TG VKWFNA KGFGFI P DGS DVFVH SA++ R L +GQK+++ + Sbjct: 4 TGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYEL 53 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 69.3 bits (168), Expect = 3e-11, Method: Composition-based stats. Identities = 31/62 (50%), Positives = 43/62 (69%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWF+ KGFGFI+P DG +D+FVH S I+++ +R+L EG+ V F +ESG G Sbjct: 8 RAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRT 67 Query: 64 AA 65 A Sbjct: 68 KA 69 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/70 (45%), Positives = 45/70 (64%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S +M+G VKW++ KGFGF+S DG KDVFVH SA+ +L EGQ+VT + G KG Sbjct: 173 STEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKG 232 Query: 62 PAAANVIITD 71 A ++ + + Sbjct: 233 REAQSITVAE 242 Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 35/63 (55%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVI 68 VKWFN +KGFGF+ DGS D F+H A++ + L G ++T G KGP N+ Sbjct: 66 VKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNIT 125 Query: 69 ITD 71 D Sbjct: 126 SVD 128 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ KM G VKWFN +G+GFISP DG DV+V+ +AI N ++L EGQ V FS Sbjct: 1 MTLKM-GRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIH 59 Query: 61 GPAAANVI 68 GP+AA+VI Sbjct: 60 GPSAADVI 67 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 31/71 (43%), Positives = 46/71 (64%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFNA KGFGFI P DGS+++FVH + I +R+++EG++V + ++ Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDF 60 Query: 61 GPAAANVIITD 71 P A NV D Sbjct: 61 APKAVNVTGPD 71 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDG-SKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 + K+ G+ +WFN DKGFGF+ +D S+D+F H + I+ + +R+L EG++V F++ G Sbjct: 9 CTEKIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGE 68 Query: 60 KGPAAANVI 68 KGP A ++ Sbjct: 69 KGPQAIEIV 77 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFNA+KGFGFI+ G DVFVH+SAI +R+L E Q V F + G +GP A Sbjct: 3 TGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHG-EGPQAE 61 Query: 66 NV 67 NV Sbjct: 62 NV 63 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/62 (59%), Positives = 41/62 (66%), Gaps = 2/62 (3%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQ-NDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFNA KGFGFIS D DVFVH++AI+ N YR L E Q+V F I G KG A Sbjct: 4 GKVKWFNATKGFGFISTED-QGDVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQAC 62 Query: 66 NV 67 NV Sbjct: 63 NV 64 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG--AKGP 62 TG VK+FN +KGFGFI P DG D+FVH SA+Q L + QKV++ E KGP Sbjct: 15 QTGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGP 74 Query: 63 AAANVIIT 70 A N+ IT Sbjct: 75 KAVNITIT 82 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 28/50 (56%), Positives = 36/50 (72%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSI 55 TG VKWFN KG+GFI P +G KDVFVH SA++ R L EGQK+++ + Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEV 52 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ ++ G+VKWFN G+GFI +D +DVF+H SAI +N R++ EG+ V F + Sbjct: 32 LATRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLV 91 Query: 57 SGAKGPAAANV 67 +GAKG AANV Sbjct: 92 AGAKGTEAANV 102 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 67.4 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 45/68 (66%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S +MTG VKW++ KGFGF+S DG KDVFVH SA+ +L EGQ+VT + G KG Sbjct: 212 SVEMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKG 271 Query: 62 PAAANVII 69 A+++ + Sbjct: 272 REASSITV 279 Score = 55.5 bits (132), Expect = 6e-07, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 34/63 (53%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVI 68 VKWFN +KGFGF+ DGS D F+H A++ + L G ++T G KGP V Sbjct: 82 VKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAVN 141 Query: 69 ITD 71 D Sbjct: 142 SVD 144 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 42/63 (66%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 ++G VKWFN KG+GFI G +D+F H+SAIQ + YRTL GQ V F+I G KG A Sbjct: 8 LSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGLHA 67 Query: 65 ANV 67 ++ Sbjct: 68 TDI 70 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 44/63 (69%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + TG+V+WF+ KGFGFI+P +G +D+FVH S+I++D +R+L EG+ V F I G G Sbjct: 4 ERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGR 63 Query: 63 AAA 65 A Sbjct: 64 TKA 66 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 30/60 (50%), Positives = 39/60 (65%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KG+GF++P DG KDVFVH SA++ Y +L EG KV + + + G AA Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 2/67 (2%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG--AKGPA 63 TG+VK+FN DKGFGFI P +G D+FVH SA+Q L E QKV+F E KGP Sbjct: 4 TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPK 63 Query: 64 AANVIIT 70 A N+ I Sbjct: 64 AVNLQIA 70 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/50 (62%), Positives = 34/50 (68%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSI 55 TG VKWFN KGFGFI P G DVFVH SA+Q TL EGQKV++ I Sbjct: 44 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEI 93 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 39/61 (63%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G+ KWFN+ KGFGF++P DG KDVFVH I+ D +R+L E + V F+ KG A Sbjct: 73 GICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEATL 132 Query: 67 V 67 V Sbjct: 133 V 133 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 31/62 (50%), Positives = 42/62 (67%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + TG V WFNA KG+GFI+P DGS ++FVH S+I ++ YR+L G V F+I G+ G Sbjct: 10 RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69 Query: 64 AA 65 A Sbjct: 70 KA 71 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 41/63 (65%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWF+ D+GFGFI P +G +++F H I + Y+TL Q+VT+ +E G G A Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 66 NVI 68 N+I Sbjct: 64 NII 66 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 K++G VK + +DKGFGFI + G DVFVHFSAIQ R L GQ+V + G +GP Sbjct: 2 EKISGYVKTWQSDKGFGFIE-LKGEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRGP 60 Query: 63 AAANVIITD 71 AA V + D Sbjct: 61 QAAAVEVLD 69 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNY-RTLFEGQKVTFSIESGAKGPAAA 65 G VKWFN DKG+GFI P DGSKDVFVH + + + L EG++V++ +E KG +A Sbjct: 5 GRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLSAM 64 Query: 66 NV 67 NV Sbjct: 65 NV 66 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 44/61 (72%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 ++G+ KWF++ KGFGFI+P DGS+D+FVH I+ + +R+L + ++V + IE+ KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 65 A 65 A Sbjct: 71 A 71 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 38/62 (61%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G+VKWFN KGFGFIS D+F H+S I+ D YR+L GQKV F + KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 67 VI 68 +I Sbjct: 64 II 65 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGS-KDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN KGFGFI+ S +D+FVHFSAI+ D Y+TL GQKV F + G KG Sbjct: 2 IEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGLQ 61 Query: 64 AANV 67 A + Sbjct: 62 AIKI 65 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 4/68 (5%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGAK 60 + G VKWFN G+GFI+ D D+FVH +A+ +N R+L +G+KV F + G K Sbjct: 58 IQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQK 117 Query: 61 GPAAANVI 68 GP AANV Sbjct: 118 GPEAANVT 125 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 3/66 (4%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW++ +KG+GFI+ DG D+FVH SAI L EG +V F + S KGP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGSE---LNEGDRVEFDVTSSPKGPRAE 59 Query: 66 NVIITD 71 +V +T+ Sbjct: 60 HVRVTE 65 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KG+GFI DG +DVFVH+S I D YR L EG+ V + ++ G KG AA Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 66 NVIITD 71 V D Sbjct: 62 QVKSRD 67 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 3/70 (4%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNY--RTLFEGQKVTFSIESGAKG 61 K G +WF+ DKG+GFI DG KD+FVH+S+IQ + + +TL E KV F+++ G +G Sbjct: 5 KEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63 Query: 62 PAAANVIITD 71 A +V++ + Sbjct: 64 AQAVDVVVVN 73 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 40/70 (57%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G VKW+N +KGFGFI+ G KDVFVH + + L EGQ+V + G KG Sbjct: 168 TEERVGTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKG 227 Query: 62 PAAANVIITD 71 P A + + D Sbjct: 228 PEARGIEVAD 237 Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 36/63 (57%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVI 68 VKWFN +KGFGF+ DGS DVF+H A++ ++ G K++ + G KG V+ Sbjct: 70 VKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVTEVL 129 Query: 69 ITD 71 D Sbjct: 130 EVD 132 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND-NYRTLFEGQKVTFSIESGAKGPAAA 65 G+VKWF+A KG+GFI +G D+FVH+S I ++ ++TL GQ V F + G KG A Sbjct: 6 GVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPKGLHAR 65 Query: 66 NVIITD 71 NV+ D Sbjct: 66 NVVPLD 71 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/50 (56%), Positives = 34/50 (68%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSI 55 TG VKWFN +KGFGFI+P DG D FVH SA++ L EGQKV + + Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDL 99 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++++++G VKWFN G+GFI+ D +DVFVH +AI +N R++ +G+KV F + Sbjct: 29 IASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVV 88 Query: 57 SGAKGPAAANV 67 G KG AANV Sbjct: 89 EGEKGNEAANV 99 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 27/51 (52%), Positives = 35/51 (68%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIES 57 G+VKWFN KGFGFI P DG +DVFVH +A++ L EG +VT+ +E Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEE 54 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 26/50 (52%), Positives = 35/50 (70%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIES 57 +VKWFN+ KGFGFI P +G D+FVH SA++ R L EGQ+V + +E Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQ 164 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/53 (52%), Positives = 39/53 (73%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSI 55 +K+ G VKWF+A KGFGF+ P DGS +VFVH SAI + +R+L +G+ V F + Sbjct: 40 DKIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEV 92 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 M ++ G+VKWFN G+GFI+ D S D+FVH SAI +N R+L EG++V F + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 SGAKGPAAANV 67 G KG A+ V Sbjct: 82 EGDKGDEASEV 92 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYR----TLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R ++ +G+ V F + Sbjct: 84 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVV 143 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 144 EGEKGAEAANVTGPD 158 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 63.2 bits (152), Expect = 2e-09, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 3/70 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND---NYRTLFEGQKVTFSIES 57 ++ K+TG VKWFN G+GFI+ D +DVFVH SAI N+ R++ +G+ V F + Sbjct: 59 IATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVI 118 Query: 58 GAKGPAAANV 67 G KG AANV Sbjct: 119 GEKGNEAANV 128 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 4/66 (6%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND----NYRTLFEGQKVTFSIESGAKGP 62 G VK+F A KGFGFI P DG +DVFVH++ I++D ++ L+EG +V ++ S KG Sbjct: 4 GTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKGT 63 Query: 63 AAANVI 68 A +V+ Sbjct: 64 QAKDVV 69 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 63.2 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 56 VATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 115 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 116 EGEKGAEAANVTGPD 130 >UniRef50_Q9RBP7 Cold shock protein 7.4 (Fragment) n=2 Tax=Rhodococcus RepID=Q9RBP7_9NOCA Length = 57 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 42/57 (73%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 + +W+NA+KGFG ++P DGSKD FVHF+A++++ + ++ +K + + AKGPAA Sbjct: 1 IARWYNAEKGFGCLTPDDGSKDCFVHFTALRSERWLSISGRRKHRKRLNTPAKGPAA 57 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 21 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVV 80 Query: 57 SGAKGPAAANV 67 G KG AANV Sbjct: 81 EGEKGAEAANV 91 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 43/68 (63%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G+VK+F+A+KGFGF++ G KDVFVH A++ +TL GQ+V + G KG Sbjct: 132 TETVEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKG 191 Query: 62 PAAANVII 69 P A V I Sbjct: 192 PQADTVAI 199 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 37/58 (63%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 ++ VKWFNA KGFGF++P DGS D F+H SA++ + EG + + +G +GP Sbjct: 49 VSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGP 106 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 62.8 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 2/66 (3%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAI--QNDNYRTLFEGQKVTFSIESGAKGPAA 64 G V+WF+A++GFGF++ DG+ D+FVH S I +D ++L EGQ V F I G +GP A Sbjct: 4 GTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQA 63 Query: 65 ANVIIT 70 V IT Sbjct: 64 RRVQIT 69 Score = 52.8 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 V W++A KGFGF++P G D FVH ++ L EG +V+FS+ G +GP A +V Sbjct: 165 VSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Score = 51.6 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G+V ++A++GFGFI+P G D+FVH S ++ + L+EG +V F + +GP A Sbjct: 256 GVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQADR 313 Query: 67 V 67 V Sbjct: 314 V 314 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 G V W+ KG+GF++P G ++F H SAI + EGQ+V F + G KGP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGG--VIAEGQRVAFLVVEGEKGPQA 137 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++NK++G VKWFN +G+GFI D +DVFVH +AIQ +N R++ + + V F + Sbjct: 25 VANKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVL 84 Query: 57 SGAKGPAAANV 67 SG KG AANV Sbjct: 85 SGPKGLEAANV 95 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 + +G VKWFN KGFGFI P DG +DVFVH SA+ L EG +V + +E + Sbjct: 53 LRRMASGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRR 112 Query: 61 GP--AAANVIIT 70 AA ++++T Sbjct: 113 SGKLAATSIVVT 124 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG--PA 63 +G+VKWFN KGFGFI P G +D+FVH SA++ L EGQ V F +E + + Sbjct: 183 SGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRRSGKTS 242 Query: 64 AANVIIT 70 A N+ IT Sbjct: 243 ATNLKIT 249 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 42/65 (64%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 + ++ +G KWFN KG+GFI P +G D+FVH +AI+ +R+L EG++V F +E A Sbjct: 20 LPDRQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDAT 79 Query: 61 GPAAA 65 G A Sbjct: 80 GRKKA 84 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/61 (50%), Positives = 36/61 (59%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G V WF+A+KGFGFI+P D S VFV F AI+ YRTL G V + E GP A Sbjct: 54 GTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAVA 113 Query: 67 V 67 V Sbjct: 114 V 114 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 M ++ G+VKWFN G+GFI+ D S D+FVH SAI +N R+L EG++V F + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 SGAKGPAAANV 67 G KG A+ V Sbjct: 82 EGDKGDEASEV 92 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+TG+VKWFN G+GFI+ D +DVFVH SAI +N R++ +G++V F + Sbjct: 84 IATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVV 143 Query: 57 SGAKGPAAANVI 68 G KG AANV Sbjct: 144 IGEKGNEAANVT 155 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG--AKG 61 + +G VK+F DKGFGFI+P +G DVFVH SA++ TL GQ+++F E KG Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 62 PAAANVIITD 71 P A + + D Sbjct: 181 PKAVELRLED 190 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 39/62 (62%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KG+GFI S D+F HFS++Q D Y+TL GQ VTF + KG A N Sbjct: 4 GKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAIN 63 Query: 67 VI 68 ++ Sbjct: 64 IV 65 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQ-NDNYRTLFEGQKVTFSIESGAKGPAA 64 T VKWF+A KG+GFI D +DVFVH+S IQ +D+++TL Q V F + G KG A Sbjct: 3 TSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHA 62 Query: 65 ANVIITD 71 V D Sbjct: 63 LEVAPLD 69 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 62.0 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 87 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 146 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 147 EGEKGAEAANVTGPD 161 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 38/54 (70%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIE 56 ++ G VKWF+ KGFGFI+P DG D+FVH S+I+++ +R+L + V F +E Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVE 66 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 39/61 (63%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G KWFN KG+GF++P DG ++VFVH S IQ +R+L E ++V F + ++G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 67 V 67 V Sbjct: 101 V 101 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ ++ G VKWFN G+GFI+ D +D+FVH +AI +N R++ EG+ V F + Sbjct: 13 LAERVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVV 72 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 73 VGEKGREAANVTGPD 87 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++NK+TG VKWFN G+GFI+ D +DVFVH SAI +N R++ +G+ V F + Sbjct: 20 IANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVV 79 Query: 57 SGAKGPAAANVI 68 G KG AANV Sbjct: 80 IGEKGHEAANVT 91 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSK-DVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 G V WF+A KGFGFI P +G + VFV FS+I+ YRTL EGQ V F +G Sbjct: 17 GTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRFVRSAG 69 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 42/65 (64%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 ++ G+VK+F+ADKGFGF+ P G KDV+V +Q+ L +GQ+V SI G KGP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 63 AAANV 67 A ++ Sbjct: 203 MAGSL 207 Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 34/61 (55%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M ++ T VKWFNA KGFGF+ DG D F+H S +Q Y L EG + + G K Sbjct: 1 MLSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQK 60 Query: 61 G 61 G Sbjct: 61 G 61 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 61.2 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGA 59 K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + G Sbjct: 210 KVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGE 269 Query: 60 KGPAAANVIITD 71 KG AANV D Sbjct: 270 KGAEAANVTGPD 281 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 61.2 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGAK 60 +TG VKWFN +G+GF+ D +D+F+H SAI N +++ EG+++ F I GAK Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 61 GPAAANVIITD 71 G AANV D Sbjct: 89 GNEAANVSAID 99 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 39/62 (62%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWF+ G+GFISP DG D++VH +AI N ++L GQ V FS GP+A + Sbjct: 6 GKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHGPSAED 65 Query: 67 VI 68 VI Sbjct: 66 VI 67 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 +S K+TG+VKWFN G+GFI+ D +D+FVH SAI +N R++ +G+ V F + Sbjct: 24 ISVKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVV 83 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 84 EGEKGHEAANVTGPD 98 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN +KGFGFI D +++FVHF A+QN R+L G KV F +G Sbjct: 10 QQRGEVKWFNPNKGFGFIL-TDSGEELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQ 68 Query: 64 AANVII 69 A NV I Sbjct: 69 ADNVYI 74 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 42/62 (67%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG+VK + ++G+G+I+P G +DVFVHF+ I ++ L +G+KV++ + G K P AA Sbjct: 3 TGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAA 62 Query: 66 NV 67 V Sbjct: 63 QV 64 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 43/68 (63%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +++G++KWF+A KG+GF+ P +G DV +H + ++ D Y+T +EG ++ AKG Sbjct: 68 EISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQ 127 Query: 64 AANVIITD 71 A ++ D Sbjct: 128 AFRIVSMD 135 Score = 48.1 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 33/59 (55%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN +GFGF++ +G+ D+FVH ++ L GQ V G+KG AA + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEI 223 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KGFGFI+ DG +++FVHF +I + R L +GQ+V+F + KGP A N Sbjct: 83 GEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQAEN 141 Query: 67 V 67 V Sbjct: 142 V 142 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGA 59 K+ G VKWFN G+GFI+ D ++D+FVH +AI N+N R+L + ++V F I G+ Sbjct: 20 KVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGS 79 Query: 60 KGPAAANVIITD 71 KG AA+V D Sbjct: 80 KGLEAASVTGPD 91 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 4/65 (6%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGAKGP 62 G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + AKG Sbjct: 5 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGS 64 Query: 63 AAANV 67 AANV Sbjct: 65 EAANV 69 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 40/71 (56%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +S ++TG+VKWF+A KG+GFI P +G DV VH S ++ L EG VT K Sbjct: 34 VSFEITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPK 93 Query: 61 GPAAANVIITD 71 G A V+ D Sbjct: 94 GAQAIRVVDVD 104 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 34/60 (56%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +VKWFN +G+GF++ +G+ D+F+H ++ R L GQ++ G KG A + Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 4/68 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGA 59 ++ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + G Sbjct: 93 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 152 Query: 60 KGPAAANV 67 KG A NV Sbjct: 153 KGAEATNV 160 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 3/68 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNY-RTLFEGQKVTFSIESGA 59 M+N TG VKW+++++G+GF+S DG +DVF+H S I+ + + + EG+ + F I Sbjct: 1 MAN-YTGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQE 58 Query: 60 KGPAAANV 67 KGPAA NV Sbjct: 59 KGPAAINV 66 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 39/62 (62%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KG+GFI +D+F+H+S+I D Y+TL GQ V+F G +G A + Sbjct: 4 GTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAVD 63 Query: 67 VI 68 ++ Sbjct: 64 IM 65 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G +KWFNA KGFGFI DG+ +VFVH+ ++ R++ +GQ+V +S+ + +GP A Sbjct: 76 GNIKWFNATKGFGFIVGDDGA-EVFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAEG 134 Query: 67 V 67 V Sbjct: 135 V 135 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 39/59 (66%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VK+FN DKG+GFI DGS D FVH +A+Q TL + Q+V++ +E+G G +A Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKVSA 84 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M++K+ G VKWFN KG GFI D DVFVH+ +I ++ ++TL +GQ V+F I Sbjct: 1 MTDKLKGTVKWFNDSKGVGFIQR-DNEADVFVHYKSIVSEGHKTLKKGQAVSFFITENDF 59 Query: 61 GPAAANVII 69 G A+ V + Sbjct: 60 GRQASEVAL 68 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 58.5 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 42/65 (64%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +S ++ G+VK F+A GF FI+P DGS+D+F+H S+++ D YR+L + + S+ S Sbjct: 2 VSERVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDD 61 Query: 61 GPAAA 65 G A Sbjct: 62 GRTKA 66 >UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cellular organisms RepID=CSPA_PHOPO Length = 46 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 26/46 (56%), Positives = 35/46 (76%) Query: 15 DKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +KGFGFI+ +G DVFVHF AI ++ ++TL EGQKV+F +E G K Sbjct: 1 EKGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQGQK 46 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 58.2 bits (139), Expect = 7e-08, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 41/61 (67%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +S ++ G VK F+A GFGFI+P D +D+F+H S+++ D+YR+L + + S+ SG Sbjct: 2 VSERVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGND 61 Query: 61 G 61 G Sbjct: 62 G 62 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%) Query: 6 TGLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 +G+ KWFN GFGFIS P+D + DVFVH S + + +R+L EG+ + FS + Sbjct: 5 SGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKS 64 Query: 59 AKGPAAANV 67 +KG A V Sbjct: 65 SKGLEAVRV 73 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 34/60 (56%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVI 68 VKWFN KGFGF++P DG+ D F+H S + L EG +V I G KGP ++ Sbjct: 47 VKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQVIRLV 106 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 39/68 (57%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 ++ G VKWF DKGFGF++ DG KDVFVH S ++ +L G++V + KG Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGRE 191 Query: 64 AANVIITD 71 A + + D Sbjct: 192 ATWIQLLD 199 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW++A+KGFGF+S DG +DV+V SA+ L GQ+V F + +G +GP A Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALPA-GVEALKSGQRVEFGVAAGRRGPQAL 73 Query: 66 NVIITD 71 ++ + D Sbjct: 74 SLKLID 79 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 32/58 (55%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + G VKW++ KGFGFI+P G KD FVH +A+ L EGQ V G KG Sbjct: 133 ECEGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKG 190 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 V WFNA KGFGF+ +DG+ + ++ ++ R + EG ++ +IE +G Sbjct: 47 VMWFNAGKGFGFVKLLDGT-EAYLPVRVLEASGTRDVCEGTRLKVTIEERPRG 98 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KGFGFI D ++FVHF AI+ R L +GQ V F++ KG A N Sbjct: 115 GTVKWFNVKKGFGFIV-RDSGDEIFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQADN 173 Query: 67 V-IITD 71 V I++D Sbjct: 174 VSILSD 179 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 5/72 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 +++ +G+VKWFN G+GF++ D +DVF+H +AI +N R++ +G+ V F + Sbjct: 22 LASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVV 81 Query: 57 SGAKG-PAAANV 67 G KG P AANV Sbjct: 82 EGEKGLPEAANV 93 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW+++DKGFGF+S +G +DV+V SA+ L GQ+V F I SG +GP A Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALPA-GVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 66 NVIITD 71 ++ + D Sbjct: 111 SLKLLD 116 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ KM G VKW++ G G ISP+DG D++V+ + I + + L EGQ+V FS G + Sbjct: 1 MTLKM-GFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRR 59 Query: 61 GPAAANVI 68 A +VI Sbjct: 60 SQMAEDVI 67 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 39/62 (62%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 K +G VK+FNA KGFGFI DG D FVH SA++ +L EG +++F +E +G Sbjct: 234 KSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKY 293 Query: 64 AA 65 AA Sbjct: 294 AA 295 Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 41/64 (64%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG+VK+FN+ KGFGF+ DG +DVFVH SA++ L EGQ ++F++ +A Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSAT 196 Query: 66 NVII 69 N+ I Sbjct: 197 NLGI 200 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWF+ +G+GF+ P +G DVF+H S + +++ L EG ++ F IE KG A Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDED---LEEGDRLEFEIEETEKGLNAV 59 Query: 66 NV 67 N+ Sbjct: 60 NI 61 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 5/71 (7%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ F + Sbjct: 55 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGE-TEFDVV 113 Query: 57 SGAKGPAAANV 67 G KG AANV Sbjct: 114 EGGKGAEAANV 124 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 38/69 (55%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFN K FGFI +G KDVFVH SA+ L EGQ V F +E Sbjct: 1 MTTNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNG 60 Query: 61 GPAAANVII 69 +A N+ I Sbjct: 61 KISAVNLRI 69 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/63 (44%), Positives = 37/63 (58%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + +G VK+FNA KGFGFI DG D FVH SA++ L EG ++ F +E +G Sbjct: 83 ERASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGK 142 Query: 63 AAA 65 AA Sbjct: 143 YAA 145 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 6/61 (9%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAI------QNDNYRTLFEGQKVTFSI 55 S + G VKWFN KGFG+I+P DG DVFVH SA+ + D R +G V F + Sbjct: 8 SARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDV 67 Query: 56 E 56 E Sbjct: 68 E 68 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 2/71 (2%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSK-DVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 + + G VKWF+A +GFGFI+ DG + DV VHFS +++ RTL EG ++ + + + Sbjct: 31 AETVVGAVKWFDATRGFGFIA-TDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDR 89 Query: 61 GPAAANVIITD 71 G A ++ D Sbjct: 90 GLQARRILAID 100 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 32/61 (52%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +VKWFN KG+GF+ ++D+F+H ++ L ++ I G KGP A + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 68 I 68 I Sbjct: 196 I 196 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G +KWFNA KGFGFI+ DG+ +VFVHF ++ + R + GQ+V + + +GP A + Sbjct: 61 GSIKWFNATKGFGFITGDDGN-EVFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAED 119 Query: 67 V 67 V Sbjct: 120 V 120 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN---YR-TLFEGQKVTFSIE 56 +S ++ G V WF KG+GFIS D +DVFVH +AI N YR ++ +G+ V F + Sbjct: 64 ISKRVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVV 123 Query: 57 SGAKGPAAANV 67 G G AANV Sbjct: 124 QGEWGTEAANV 134 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 3/66 (4%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSK--DVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 ++TG++KWF++ KG+GF++P D K D+ +H S +Q D ++T EG KV S++ +G Sbjct: 13 EITGIIKWFDSSKGYGFVTP-DFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKRG 71 Query: 62 PAAANV 67 V Sbjct: 72 LKCIQV 77 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 33/60 (55%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +VKWFN DKGFGF+S G++D+F+H ++ L GQ V G KG A + Sbjct: 109 IVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKGLMTAEI 168 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G V WFN KGFGFI+ DG DVFVH++ I D +++L G++V++++ P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDGL-DVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 64 AANVIITD 71 A +V + D Sbjct: 61 AVDVHLAD 68 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 4/68 (5%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGAK 60 + G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + AK Sbjct: 30 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 89 Query: 61 GPAAANVI 68 G AANV Sbjct: 90 GSEAANVT 97 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 4/68 (5%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGAK 60 + G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + AK Sbjct: 21 VEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 80 Query: 61 GPAAANVI 68 G AANV Sbjct: 81 GSEAANVT 88 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQND-NYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWF+ KG+GFI DG +D+FVHFSAI ++ +++ L + +V F I+ KG A NV Sbjct: 7 VKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQKGMQAKNV 66 Query: 68 I 68 Sbjct: 67 C 67 >UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQP4_RHORT Length = 70 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI+P DG D FVH SA++ + R+ G + S + + P A+ Sbjct: 3 TGTVKWFNVQKGFGFIAPDDGGSDAFVHISAVERSSDRSP-PGYRCRESRDRKRRWPGAS 61 Query: 66 N 66 Sbjct: 62 R 62 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 4/63 (6%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 TG VK+FN KGFGFI D+FVH SA+ + + E KV FSIE G KG A Sbjct: 137 QTGTVKFFNETKGFGFIKSDSSGDDIFVHVSALID----QIHENDKVRFSIEHGRKGLNA 192 Query: 65 ANV 67 N+ Sbjct: 193 VNI 195 >UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EZ0_PEDPA Length = 69 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG V+ F+ +KG+GFI G K VF H++ IQ+++Y+TL G+KV + G KG A Sbjct: 3 TGTVESFDKEKGYGFIETASGDK-VFAHYTVIQSEDYKTLEVGEKVKLMLADGPKGLIAV 61 Query: 66 NV 67 V Sbjct: 62 KV 63 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Query: 7 GLVKWFNADKGFGFISPVDGSK---DVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G KWFN+ +G+GFI+P S+ DVFVH S+I + +R+L EG +V F + KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 64 AANVI 68 A V+ Sbjct: 89 AVKVV 93 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN-----YRTLFEGQKVTFSI 55 ++ + G VKW++ + +GFIS DG KD+FVH +AI RTL + ++V F + Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDL 121 Query: 56 ESGAKGPAAANV 67 G GP AANV Sbjct: 122 VEGKNGPEAANV 133 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 35/62 (56%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI P +G DVFVH + ++ TL E KV + + AA Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 66 NV 67 N+ Sbjct: 69 NI 70 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 13/75 (17%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFE------GQKVTFSIESGAK-- 60 V WFN +G+G++ P DGS+DVFVH S +Q D +R+++E G ++ F ++ + Sbjct: 44 VTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDDERRR 103 Query: 61 -----GPAAANVIIT 70 GPA A + T Sbjct: 104 AKNVTGPAGAPLKKT 118 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 37/64 (57%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G V+ F+A+KG+G+I P G ++ VHFSAI L GQ V+F I +GP A Sbjct: 4 GTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAER 63 Query: 67 VIIT 70 V I+ Sbjct: 64 VQIS 67 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 54.7 bits (130), Expect = 8e-07, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 7/63 (11%) Query: 6 TGLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 TG KWFN GFGFIS P+D DVFVH S + + +R+L EG+ V F+ + Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 59 AKG 61 +KG Sbjct: 117 SKG 119 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 54.7 bits (130), Expect = 8e-07, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 7/63 (11%) Query: 6 TGLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 TG KWFN GFGFIS P+D DVFVH S + + +R+L EG+ V F+ + Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 90 Query: 59 AKG 61 +KG Sbjct: 91 SKG 93 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 54.7 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 1/53 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND-NYRTLFEGQKVTFSI 55 + TG V F+ KGFGFI P G KD+FVH SAI++D YRTL+E V F+I Sbjct: 13 RSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTI 65 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW++A KGFGF++ DG +VF+H SA+ TL GQ+V F I G KG A Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGG-EVFLHASALPPGTT-TLRPGQRVEFGIVEGRKGTQAL 60 Query: 66 NVIITD 71 V + D Sbjct: 61 QVRLLD 66 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 5/69 (7%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFS-IESGA 59 + G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F IE+ Sbjct: 30 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVIEAAK 89 Query: 60 KGPAAANVI 68 KG AANV Sbjct: 90 KGSEAANVT 98 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISP-VDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 S K++G +KWF+ KG+GFI P G D+ +H ++++ D ++T EG ++ + G + Sbjct: 23 SLKVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDR 82 Query: 61 GPAAANVIITD 71 G V+ D Sbjct: 83 GLQCFRVLSMD 93 >UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B5872A Length = 71 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/35 (71%), Positives = 27/35 (77%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND 40 TG VKWFN++KGFGFIS DG DVFVHFS I D Sbjct: 3 TGTVKWFNSEKGFGFISQDDGGPDVFVHFSPIPGD 37 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 34/53 (64%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIE 56 K G+V WFN KGFGF++ DG DVFVH S I + +R+L + + V F +E Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELE 95 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 5/63 (7%) Query: 3 NKMTGLVKWFNADKGFGFISPVDG----SKDVFVHFSAIQNDN-YRTLFEGQKVTFSIES 57 +K+ G VKWF++ KG+GF++P ++++FVH ++IQ++ YRTL E ++ F +E Sbjct: 2 SKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVEK 61 Query: 58 GAK 60 A+ Sbjct: 62 EAE 64 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 + G+V WFN KGFGFI + +D++VH+S + D ++TL G+KV F + P A Sbjct: 3 LKGVVSWFNDIKGFGFIVD-EAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 65 ANVIITD 71 V I + Sbjct: 62 TAVRIIN 68 >UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JBF9_AGRRK Length = 68 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 35/58 (60%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 G+VK F+ +KG+GFI P DGS +FVH + TL +GQK+ F IE G ++ Sbjct: 4 GIVKNFDLEKGYGFIQPTDGSVAIFVHAKIVVKSGLETLKKGQKLIFEIEQDGMGRSS 61 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQN-DNYRTLFEGQKVTFSIESGAKGPAAA 65 G +K+F+ +GFGFI P+DGS+DVF+H + I + L EGQ + + E KG +A Sbjct: 4 GKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSAL 63 Query: 66 NVIITD 71 N D Sbjct: 64 NAAPAD 69 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 22/42 (52%), Positives = 32/42 (76%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTL 45 + G VKWF+ KGFGFI+P DG D+FVH S+I+++ +R+L Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + TG V WF+ +K +GFI+ G+ +FVH A+ D R L EG++V+F + G K Sbjct: 1 MNERSTGTVAWFDPEKSYGFITTHAGAS-LFVHRRAL-GDGRRWLVEGEEVSFVVVRGMK 58 Query: 61 GPAAANVIIT 70 G A +V++T Sbjct: 59 GDEANDVLVT 68 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 8/70 (11%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVH--------FSAIQNDNYRTLFEGQKVTFSIESG 58 G KWFN KG+GFI+P +G DVFVH S + D +R+L G++V F I Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 59 AKGPAAANVI 68 +G A V+ Sbjct: 71 PEGNEATAVV 80 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G KWF+ K +GF++P DGS DVFVH I+ YR+L ++V + + KG A Sbjct: 65 GKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREATT 124 Query: 67 VIITD 71 V D Sbjct: 125 VTGVD 129 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSI 55 ++ G+ KWFN KG+GFI+ +G +DVFVH S I D +R+L E +KV + Sbjct: 3 RLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEV 53 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 G KWF++ KGFGFI+ DG+ D+FVH + I+ +R L EG+ V F ++ G G Sbjct: 90 GHCKWFDSKKGFGFITAEDGT-DLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDG 143 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 3/65 (4%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAI---QNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKW+N KG+GFI D +DVFVH SAI Q ++L E + V F + G+KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 64 AANVI 68 A NV Sbjct: 65 AMNVT 69 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 7/63 (11%) Query: 6 TGLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 G+ KWFN GFGF+S +D DVFVH S + + +R+L EG+ V F+ + Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKS 100 Query: 59 AKG 61 AKG Sbjct: 101 AKG 103 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 G VK+FN KGFGFI D ++D+FVH S + ++ + E +V F +E G KG A Sbjct: 2 QEGKVKFFNNTKGFGFIKADDSNEDIFVHSSGLIDE----IREDDRVQFEVEQGKKGLNA 57 Query: 65 ANVIITD 71 NV + D Sbjct: 58 VNVEVID 64 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVDGS----KDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 ++TG VKWF+A KG+GFI P D + KDV +H +++++ EG +T + Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 60 KGPAAANVIITD 71 KG A V+ D Sbjct: 86 KGWQVAEVVDLD 97 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 27/59 (45%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN KG+GF+ D+FVH ++ L G+ V G KG A + Sbjct: 138 VKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEI 196 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 35/60 (58%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +V+WF+ G+G I+ D ++VF+ F+AI + YRT+ V F + G GP A NV Sbjct: 1 MVRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 38/67 (56%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 K+ G+VKWF+ KGFGF++ DG D+ +H + ++N ++ EG V I+ +G Sbjct: 8 QRKIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRG 67 Query: 62 PAAANVI 68 A V+ Sbjct: 68 MQAVEVL 74 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 33/64 (51%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 + VKWF+ KGFGF + DVF+H +++ + L G+ + + G +G A Sbjct: 104 LPARVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMA 163 Query: 65 ANVI 68 A ++ Sbjct: 164 AQIL 167 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 35/64 (54%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 +TG + WF+ G+GFI P DG D+ V A+ R+L +GQ+V + + G A Sbjct: 2 LTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTRPRFGGAM 61 Query: 65 ANVI 68 A +I Sbjct: 62 AGMI 65 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 3/64 (4%) Query: 5 MTGLVKWFNADKGFGFIS-PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VK F+ KG+GFI+ P +G ++FVH+S I+ R L ++V+ I G KGP Sbjct: 2 LKGKVKSFDEQKGWGFITVPHEG--EIFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 64 AANV 67 AA+V Sbjct: 60 AAHV 63 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KGFGFI +G ++FVH +I + R+L +G V + + + KGP A Sbjct: 126 GTVKWFNGTKGFGFIIRENGD-EIFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAEE 184 Query: 67 VIITD 71 V D Sbjct: 185 VEALD 189 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW++A KGFGF++ DG +VFVH SA+ + +L GQ+V F + G +G A Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGG-EVFVHSSALPS-GVTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 66 NVIITD 71 +V D Sbjct: 65 SVRTLD 70 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 ++G V ++ ++GFGF++P G DVF+H + I D +L G KV+F +E +G A Sbjct: 7 VSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDES-SLKPGAKVSFDVEETDRGAKA 65 Query: 65 ANVIITD 71 NV +T+ Sbjct: 66 VNVAVTE 72 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 7/63 (11%) Query: 6 TGLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 +G+ KWFN GFGF+S +D DVFVH S + + +R+L EG+ V F+ + Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 59 AKG 61 +KG Sbjct: 95 SKG 97 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 35/67 (52%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S ++ G VKWF+ KG+GFI+ G +DV +H S ++ T EG VT KG Sbjct: 11 SREIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKG 70 Query: 62 PAAANVI 68 A +I Sbjct: 71 LQATRII 77 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 34/59 (57%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWF+ KG+GF++ + ++D+FVH ++ L GQ++ S G KG AA + Sbjct: 109 VKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 >UniRef50_UPI0001AF6C46 cold-shock DNA-binding protein family protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6C46 Length = 99 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 37/69 (53%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MS G++ WF+ ++GFGF+ P DG +DVF+ S I + + EGQ V++ Sbjct: 30 MSTVSYGVINWFDDERGFGFVHPADGDRDVFIDSSEIVDWPAGGVHEGQHVSYQTGGTRH 89 Query: 61 GPAAANVII 69 P A V I Sbjct: 90 WPRAQAVHI 98 >UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmataceae RepID=B9KHN5_ANAMF Length = 92 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 15/78 (19%) Query: 6 TGLVKWFNADKGFGFISPVDGS--------------KDVFVHFSAIQNDNYRTLFEGQKV 51 TG VKWF+ +KG+GFI DGS KDVFVH +++Q L EGQ+V Sbjct: 13 TGHVKWFSVEKGYGFICK-DGSDDGKSGGASFGRGDKDVFVHITSLQRSRIDNLREGQRV 71 Query: 52 TFSIESGAKGPAAANVII 69 + ++ +A N+ + Sbjct: 72 RYQLDESNGKVSAVNLEV 89 >UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYK4_RHOSR Length = 79 Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 13 NADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVIIT 70 N +KGFGF +P G VFVHFS I ++TL EGQ + + + G KG A N T Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKGVQAENAQTT 79 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 ++ G +K +N ++GFGFI PV G +D+FVH A + R GQ VTF +E G G Sbjct: 2 RLDGKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPSGTGRPTV-GQAVTFEVELGPNG 58 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWF+ KG+GFI+ D K+ FVH S I +R L G++V++ +++ KG A + Sbjct: 15 GTVKWFDPVKGYGFIAG-DNGKETFVHQSDILMRGFRHLETGERVSYRVKATEKGDKAID 73 Query: 67 VI 68 VI Sbjct: 74 VI 75 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 34/63 (53%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVI 68 VKWFN KGFGF+S DG++D+FVH ++ L G+++ G KG A V Sbjct: 136 VKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEVR 195 Query: 69 ITD 71 D Sbjct: 196 PLD 198 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 37/68 (54%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +++G +KWF+ KG+GF+ +G DV +H +A++ D + EG +V G KG Sbjct: 32 EISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQ 91 Query: 64 AANVIITD 71 VI D Sbjct: 92 VFRVISLD 99 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 5/67 (7%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAI--QNDNY--RTLFEGQKVTFS-I 55 S ++TG VKWFNA GFGFI+ D +D+FVH S I N N+ +++ +G+ V F I Sbjct: 30 RSKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEFGLI 89 Query: 56 ESGAKGP 62 S GP Sbjct: 90 ASKVTGP 96 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 4/69 (5%) Query: 2 SNKMTGLVKWFNADKGFGF-ISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 S + G VKWF+ +KG+GF + P G +D+FVH S ++ D +L +G +V + + + Sbjct: 131 SQREQGRVKWFDPEKGYGFLVRP--GGEDLFVHHSEVEGDAS-SLGQGVEVEYEVGRNER 187 Query: 61 GPAAANVII 69 GP A V + Sbjct: 188 GPNARRVRV 196 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSI 55 ++TG VKWFN GFGFI+ D +D+FVH S+I N R++ EG+ V F + Sbjct: 51 RITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGV 106 >UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XTJ6_CAEEL Length = 294 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 8/75 (10%) Query: 5 MTGLVKWFNADKGFGFIS---PVDGSKDVFVHFSAIQNDN-----YRTLFEGQKVTFSIE 56 + G VKWF+ +GF++ P D ++D FVH +AI + RTL + + V F I Sbjct: 89 VKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIV 148 Query: 57 SGAKGPAAANVIITD 71 G KGP AANV D Sbjct: 149 EGLKGPEAANVTGPD 163 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN-YRTLFEGQKVTFSI 55 G V F+ KGFGFI P DG +D+FVH SAI++D YR+L E V F++ Sbjct: 16 GKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTV 65 >UniRef50_D0L1T1 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1T1_HALNC Length = 204 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +V+W +A KGFGFI P+DG DVFVH + N R + +G+ VT+++E A+ A+ Sbjct: 7 IVRWQDA-KGFGFIHPLDGGADVFVHIRSFTNRQRRPV-DGEIVTYTVEHDAQNRKRASD 64 Query: 68 II 69 I+ Sbjct: 65 IV 66 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 3/62 (4%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG+VK+FN KG+GFI D ++D+FVH + + N T+ E +V F + G KG A Sbjct: 3 TGVVKFFNESKGYGFIVEDDTNRDIFVHITGL---NGITIREKDRVQFEVVDGKKGLNAV 59 Query: 66 NV 67 V Sbjct: 60 KV 61 >UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Proteobacteria RepID=C7LWH7_DESBD Length = 168 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 3/65 (4%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSI-ESGAKGP 62 + G + + D+GFGFI+P G VFVH SA+Q R G+ VT+ + SG KGP Sbjct: 2 RFHGEISEWRDDRGFGFITPTGGGTRVFVHISALQKG--RRPRAGEMVTYEVGNSGDKGP 59 Query: 63 AAANV 67 A NV Sbjct: 60 RALNV 64 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 4/63 (6%) Query: 7 GLVKWFNADKGFGFISP---VDGSKDVFVHFSAIQNDNYRTLFEGQKVTFS-IESGAKGP 62 G +KW+N DKG+GFI+P + DVF+H SA+ + L EGQ VT+ +++ A G Sbjct: 5 GSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGK 64 Query: 63 AAA 65 +A Sbjct: 65 YSA 67 >UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A3J0H8_9FLAO Length = 148 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G + +FN KGFGFI V+ + FVH S + +D + EG VT+ +E GAKG A N Sbjct: 89 GTIDFFNDSKGFGFIKAVETGEKYFVHISGLLDD----VKEGNLVTYDLEKGAKGMNAVN 144 Query: 67 V 67 V Sbjct: 145 V 145 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 TG VK+FNA+KG+GFI P DG+ D+F+H + D R +V + + G G Sbjct: 2 QTGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGLA-DKLRYPCPRDRVEYEVGKGPDGRLR 60 Query: 65 ANVI 68 A + Sbjct: 61 AERV 64 >UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=Bacteria RepID=Q1AY27_RUBXD Length = 69 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 1/48 (2%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFS 54 G VKWF+ +KGFGFI G ++V VH++ I+ + +R L EG +V ++ Sbjct: 4 GRVKWFSGEKGFGFIETESG-EEVLVHYTEIKGEGFRALEEGAEVEYA 50 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVD----GSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 +++G VKWF+ KG+GFI P D G KDV +H ++++N T EG + + Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 60 KGPAAANVIITD 71 KG + V+ D Sbjct: 77 KGWQVSEVVDLD 88 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 26/59 (44%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN KG+GF+ D+FVH ++ L G V G KG A + Sbjct: 138 VKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVAEI 196 >UniRef50_B8BT01 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BT01_THAPS Length = 50 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 2/52 (3%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIE 56 +TG VKW+NA++GFGFI+ DG D++VH + + D L E ++V F+ E Sbjct: 1 VTGTVKWYNAERGFGFIAIDDGGADMYVHATGLTFDG--PLIENERVGFTTE 50 >UniRef50_UPI000169964E Cold-shock DNA-binding protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI000169964E Length = 61 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 1/55 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 TG VKWF++ KG+GFI +G KD+FVHF AI + + +L +G K + ++S A+ Sbjct: 1 TGTVKWFDSGKGYGFIER-EGGKDLFVHFRAIVGEGHVSLEDGPKGSSLLKSMAR 54 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VK+FN KGFGFI + K+ FVH S + ++ + E +VTF +E G KG A N Sbjct: 4 GTVKFFNNSKGFGFIIEKESGKEYFVHVSGLVDE----IRENDEVTFELEKGKKGLNAVN 59 Query: 67 V 67 V Sbjct: 60 V 60 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 4/63 (6%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G+VK+FN KGFGFI+ KD FVH S + ++ + EG +V F ++ G KG A N Sbjct: 4 GIVKFFNDSKGFGFITEEGQEKDHFVHISGLIDE----VREGDEVEFELKEGNKGLNAVN 59 Query: 67 VII 69 V + Sbjct: 60 VRV 62 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 31/50 (62%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSI 55 TG +KWF+ KG+GFI+ DG DVF+H S + N TL G ++ + + Sbjct: 3 TGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVL 52 >UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHA3_9CLOT Length = 436 Score = 49.3 bits (116), Expect = 3e-05, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +S+ + G VK + +++GFGFI D K+ + H S + + + + EG VTFSI+ K Sbjct: 366 VSDIIKGKVKKYVSERGFGFIK--DREKEFYFHISDVYQTHQKNVCEGADVTFSIQESTK 423 Query: 61 GPAAANV 67 GP A + Sbjct: 424 GPVAKQI 430 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 34/55 (61%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 G KWFN KG+GF+ +D+FVH S + +R+L EG++V++ I+ + G Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNG 109 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYR---TLFEGQKVTFSIES 57 M M G VKWFN +KG+GFI D +K+ FVH+ +I ++ R L + + VTF + Sbjct: 1 MRFNMKGKVKWFNKNKGYGFII-TDDNKEYFVHWKSIVTNSPRELKVLEQDELVTFDLME 59 Query: 58 GAKGPAAANVI 68 KG A N+I Sbjct: 60 TDKGIQAINII 70 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 4/66 (6%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA- 65 G V+W++ KG+GFI DG KDVF+ +A+ ++L +G +V FS+ G KGP A Sbjct: 4 GRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPV-TVKSLHKGTRVEFSVIEGRKGPQAMG 61 Query: 66 -NVIIT 70 NVI T Sbjct: 62 LNVIAT 67 >UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus RepID=C7HUZ9_9FIRM Length = 68 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN-YRTLFEGQKVTFSIESGAKGP 62 KM G VK+F+ KGFGFI G D F H+S I +D Y+T+ G +V F ++ +G Sbjct: 2 KMEGKVKFFDNKKGFGFIESESG--DYFFHYSEIISDKVYKTIENGARVEFDVKDFGRGD 59 Query: 63 AAANV 67 A NV Sbjct: 60 TAFNV 64 >UniRef50_Q5L9T7 Cold shock-like protein n=5 Tax=Bacteroides RepID=Q5L9T7_BACFN Length = 69 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 + G +++FNA KG+GF+ D + F H S+ T+ EG +VTF IE G +G A Sbjct: 6 LMGRIEYFNAAKGYGFVKDADNGEKYFFHISSAPA----TIAEGDRVTFEIERGMRGMNA 61 Query: 65 ANV-IITD 71 + I+T+ Sbjct: 62 VRISIVTE 69 >UniRef50_B7VTL0 Putative uncharacterized protein n=2 Tax=Vibrio RepID=B7VTL0_VIBSL Length = 81 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 29/56 (51%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 G + WF+ + GFGF P G DV +H S I+ D L EGQ+V +E P Sbjct: 6 GYITWFHLENGFGFAKPDHGDIDVLIHISIIEFDGEINLEEGQRVYLELEEVKDKP 61 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 35/62 (56%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TGLVKWF+ KGFGF+ +G D+ +H + ++N ++ +G ++ + +G A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 66 NV 67 V Sbjct: 72 QV 73 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 30/59 (50%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWF+ KGFGF + S D+F+H ++ L G+ + + G +G AA V Sbjct: 108 VKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 >UniRef50_Q2MF47 Putative cold shock protein n=1 Tax=Streptomyces rimosus subsp. paromomycinus RepID=Q2MF47_STRRY Length = 76 Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN-YRTLFEGQKVTFSIESGAKGPAAA 65 G+VKWF+ ++G G ++ G DV + SAIQ D RTL G++V+F++ +G A Sbjct: 4 GVVKWFDHERGAGLVAQTGGGPDVLAYRSAIQGDEPARTLTTGERVSFNLVEDFEGIRAE 63 Query: 66 NV 67 N+ Sbjct: 64 NI 65 >UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4M3_AZOSE Length = 189 Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 2/49 (4%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIE 56 L KW N D+GFGFI P DG +VFVH SA D R G+ ++F IE Sbjct: 7 LGKW-NDDRGFGFIVPKDGGPEVFVHVSAFPRDGRRPQI-GEPLSFEIE 53 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 12 FNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 F++ +GFGFI P DG DVFVH + I D L +G+ F + G +GP A N+ Sbjct: 11 FDSSRGFGFIRPEDGGPDVFVHVNDIGLDED-ELRQGRVFEFDVTEGDRGPKAINL 65 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 116 3e-25 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 112 5e-24 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 111 7e-24 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 109 3e-23 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 108 8e-23 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 107 9e-23 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 107 9e-23 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 107 1e-22 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 107 1e-22 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 106 2e-22 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 105 3e-22 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 105 5e-22 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 105 5e-22 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 104 7e-22 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 103 2e-21 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 103 2e-21 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 102 3e-21 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 102 3e-21 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 102 4e-21 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 101 6e-21 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 101 8e-21 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 100 1e-20 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 100 1e-20 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 100 2e-20 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 100 2e-20 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 100 2e-20 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 100 3e-20 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 100 3e-20 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 99 3e-20 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 99 3e-20 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 99 4e-20 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 99 4e-20 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 99 5e-20 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 99 5e-20 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 98 8e-20 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 98 1e-19 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 97 1e-19 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 97 2e-19 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 97 2e-19 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 97 2e-19 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 97 2e-19 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 97 2e-19 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 97 2e-19 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 97 2e-19 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 96 3e-19 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 96 3e-19 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 96 3e-19 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 96 3e-19 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 96 3e-19 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 96 3e-19 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 96 3e-19 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 96 3e-19 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 95 4e-19 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 95 4e-19 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 95 5e-19 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 95 5e-19 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 95 5e-19 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 95 6e-19 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 95 6e-19 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 95 7e-19 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 95 7e-19 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 95 8e-19 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 95 8e-19 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 95 9e-19 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 94 9e-19 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 94 1e-18 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 94 1e-18 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 94 1e-18 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 94 1e-18 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 94 1e-18 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 94 1e-18 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 94 1e-18 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 94 1e-18 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 94 1e-18 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 94 1e-18 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 94 2e-18 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 94 2e-18 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 94 2e-18 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 94 2e-18 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 94 2e-18 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 94 2e-18 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 94 2e-18 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 94 2e-18 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 93 2e-18 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 93 2e-18 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 93 2e-18 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 93 2e-18 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 93 3e-18 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 93 3e-18 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 93 3e-18 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 92 3e-18 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 92 4e-18 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 92 4e-18 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 92 4e-18 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 92 4e-18 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 92 4e-18 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 92 4e-18 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 92 5e-18 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 92 5e-18 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 92 5e-18 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 92 5e-18 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 92 5e-18 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 92 6e-18 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 92 6e-18 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 92 7e-18 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 91 8e-18 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 91 8e-18 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 91 8e-18 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 91 9e-18 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 91 1e-17 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 91 1e-17 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 91 1e-17 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 90 1e-17 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 90 1e-17 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 90 2e-17 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 90 2e-17 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 90 3e-17 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 90 3e-17 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 90 3e-17 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 89 3e-17 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 89 5e-17 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 89 6e-17 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 89 6e-17 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 89 6e-17 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 88 6e-17 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 88 8e-17 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 88 9e-17 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 88 9e-17 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 88 1e-16 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 88 1e-16 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 87 1e-16 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 87 1e-16 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 87 1e-16 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 87 1e-16 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 87 2e-16 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 87 2e-16 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 87 2e-16 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 87 2e-16 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 87 2e-16 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 87 2e-16 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 87 2e-16 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 87 2e-16 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 86 3e-16 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 86 3e-16 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 86 3e-16 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 86 4e-16 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 86 4e-16 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 86 4e-16 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 86 4e-16 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 85 4e-16 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 85 5e-16 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 85 6e-16 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 85 6e-16 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 85 7e-16 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 85 7e-16 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 85 8e-16 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 85 8e-16 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 84 1e-15 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 84 1e-15 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 84 1e-15 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 84 1e-15 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 84 2e-15 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 84 2e-15 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 83 3e-15 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 83 3e-15 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 82 4e-15 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 82 5e-15 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 82 5e-15 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 82 5e-15 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 82 5e-15 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 82 5e-15 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 81 1e-14 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 81 1e-14 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 81 1e-14 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 81 1e-14 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 81 1e-14 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 81 1e-14 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 81 1e-14 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 80 1e-14 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 80 1e-14 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 80 2e-14 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 80 2e-14 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 80 3e-14 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 79 4e-14 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 79 4e-14 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 79 4e-14 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 79 4e-14 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 79 5e-14 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 79 5e-14 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 78 7e-14 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 78 9e-14 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 78 9e-14 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 78 1e-13 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 78 1e-13 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 77 1e-13 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 77 2e-13 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 77 2e-13 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 77 2e-13 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 77 2e-13 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 77 2e-13 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 76 3e-13 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 76 3e-13 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 76 3e-13 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 76 4e-13 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 76 4e-13 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 75 5e-13 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 75 5e-13 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 75 6e-13 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 75 6e-13 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 75 6e-13 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 75 7e-13 UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript eviden... 75 9e-13 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 74 1e-12 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 74 1e-12 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 74 1e-12 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 74 1e-12 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 74 2e-12 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 74 2e-12 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 74 2e-12 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 73 2e-12 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 73 2e-12 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 73 2e-12 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 73 2e-12 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 73 2e-12 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 72 4e-12 UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Ma... 72 4e-12 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 72 4e-12 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 72 4e-12 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 72 4e-12 UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae Re... 72 5e-12 UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rh... 72 5e-12 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 72 7e-12 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 71 8e-12 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 71 1e-11 UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ra... 71 1e-11 UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmatace... 71 1e-11 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 71 1e-11 UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfot... 70 1e-11 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 70 1e-11 UniRef50_C8WB38 Cold-shock DNA-binding domain protein n=3 Tax=Zy... 70 1e-11 UniRef50_UPI0001AF6C46 cold-shock DNA-binding protein family pro... 70 2e-11 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 70 2e-11 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 70 2e-11 UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Ba... 70 2e-11 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 70 2e-11 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 69 4e-11 UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodoco... 69 4e-11 UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cel... 69 5e-11 Sequences not found previously or not previously below threshold: UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 73 3e-12 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 70 3e-11 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 71/71 (100%), Positives = 71/71 (100%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 Query: 61 GPAAANVIITD 71 GPAAANVIITD Sbjct: 61 GPAAANVIITD 71 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 47/70 (67%), Positives = 57/70 (81%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ K+TGLVKWFN +KGFGFI+P DGSKDVFVHFSAIQ++ +RTL E Q+V FS E G K Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPK 60 Query: 61 GPAAANVIIT 70 GP+A NV+ Sbjct: 61 GPSAVNVVAL 70 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 111 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFN +KG+GFI+P G D+FVHF AI+ + +++L EGQ+VTF G K Sbjct: 97 MAERQKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQK 155 Query: 61 GPAAANVIIT 70 G A V Sbjct: 156 GMQADKVQPV 165 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 39/69 (56%), Positives = 49/69 (71%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSN+ TG VKWFN +KGFGFI+P G D+FVHF AI++D +++L EGQ V+F E G K Sbjct: 22 MSNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQK 81 Query: 61 GPAAANVII 69 G AA V Sbjct: 82 GMQAAQVRP 90 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 108 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 +++TG VKWFN KGFGFI+P DG D+FVH S+I+++ +R+L EG+ V F +ES G Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGR 61 Query: 63 -AAANVIITD 71 A +V D Sbjct: 62 TKAVDVTGPD 71 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 46/68 (67%), Positives = 55/68 (80%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 +K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ+V F I +GAKGP Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 Query: 63 AAANVIIT 70 +AANVI Sbjct: 62 SAANVIAL 69 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 53/70 (75%), Positives = 59/70 (84%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSNKMTGLVKWF+A KGFGFISP DGSKDVFVHFSAIQ ++Y+TL EGQ V FSIE G K Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 61 GPAAANVIIT 70 GP+A NV+ Sbjct: 61 GPSAVNVVAL 70 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 43/69 (62%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + TG VKWFN KGFGFI+P +G DVF HFS I +R+L E Q+V+F I G KG Sbjct: 42 NKMATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKG 101 Query: 62 PAAANVIIT 70 A+N+ Sbjct: 102 KQASNIQPI 110 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S ++ G VKWF+A KGFGFI+P DG +D+FVH S++++D YR+L +G V FS+ SG G Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDG 62 Query: 62 P-AAANVIIT 70 A NV Sbjct: 63 RTKAVNVTAP 72 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 42/66 (63%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 N TG VKWFN KGFGFI+ G +DVF H +AI D +RTL EGQKV F + G KG Sbjct: 33 NMATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGL 92 Query: 63 AAANVI 68 A NV Sbjct: 93 QAQNVR 98 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 105 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 43/65 (66%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KG+GFI +G +D+F H+SAI D Y+TL GQ+V+F I G KG A Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 66 NVIIT 70 N++ Sbjct: 104 NIVAP 108 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 48/67 (71%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + TG VKWF+A KG+GFI+ DG DVFVHFSAI+ + +++L +G KV F I +G KG Sbjct: 21 TKMYTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKG 80 Query: 62 PAAANVI 68 P AA V+ Sbjct: 81 PQAAKVV 87 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 52/65 (80%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG+VKWFNA+KG+GFI+P DGSKD+F H+S I ++ Y++L E Q+VTF + G KGP+A Sbjct: 3 TGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAK 62 Query: 66 NVIIT 70 N+ ++ Sbjct: 63 NIKVS 67 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 34/71 (47%), Positives = 43/71 (60%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 + TG VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G K Sbjct: 21 CRSMETGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPK 80 Query: 61 GPAAANVIITD 71 G A+ ++ + Sbjct: 81 GNHASVIVPLE 91 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G VKWFN KGFGFIS G DVFVHF AI+ + +R L EGQ+V F+I KG Sbjct: 172 AGREAGTVKWFNTSKGFGFISRDSG-DDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKG 230 Query: 62 PAAANVIITD 71 A +V+ + Sbjct: 231 LQAEDVVPVE 240 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 44/67 (65%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG+VKWFN KGFGFI P G D+F HFS I+ D +++L E Q+V F +++G KG Sbjct: 18 MQTGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQ 77 Query: 64 AANVIIT 70 AAN+ Sbjct: 78 AANITPL 84 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 45/64 (70%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWFN KGFGFI+P G +D+F HFSAI + ++TL EGQKV+F + G KG Sbjct: 1 MQTGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQ 60 Query: 64 AANV 67 A+N+ Sbjct: 61 ASNI 64 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 44/67 (65%), Positives = 50/67 (74%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ V F I+ G KGPA Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 Query: 64 AANVIIT 70 A NV Sbjct: 63 AVNVTAI 69 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 42/65 (64%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI+ DG DVF H +AIQ D +RTL EGQKV F G KG A Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAE 62 Query: 66 NVIIT 70 NV + Sbjct: 63 NVRVV 67 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 36/62 (58%), Positives = 44/62 (70%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNA+KG+GFI+P D S DVFVHFSAIQ + ++ L E +V F + G KG AAN Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 67 VI 68 V Sbjct: 64 VT 65 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 43/68 (63%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN KGFGFI P G +DVF HFSAI D +RTL +G +V+F + G KG Sbjct: 1 MVNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKL 60 Query: 64 AANVIITD 71 A N+ + Sbjct: 61 AQNIAPLE 68 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFNA+KG+GFI+ DG KDVFVH+S+I ++ ++TL EGQ VT+ + +G A Sbjct: 23 TGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQAN 81 Query: 66 NVIITD 71 NV + D Sbjct: 82 NVTVVD 87 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 4/73 (5%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESG 58 K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + G Sbjct: 209 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 268 Query: 59 AKGPAAANVIITD 71 KG AANV D Sbjct: 269 EKGAEAANVTGPD 281 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 39/65 (60%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G+ KWFN+ KGFGF++P DG KDVFVH I+ D +R+L E + V F+ KG A Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEAT 131 Query: 66 NVIIT 70 V Sbjct: 132 LVTGP 136 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + TG VKWFN KG+GFI DVFVH+ AI+ D +R+L EGQ+V FS+ G K Sbjct: 68 MAERETGTVKWFNDAKGYGFIQR-GNGADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQK 126 Query: 61 GPAAANV 67 G A +V Sbjct: 127 GLQAEDV 133 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 41/65 (63%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G KG A+ Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 66 NVIIT 70 ++ Sbjct: 63 LIVPL 67 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYR----TLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R ++ +G+ V F + Sbjct: 84 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVV 143 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 144 EGEKGAEAANVTGPD 158 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 44/68 (64%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 ++ ++G VKWFN KG+GFI G +D+F H+SAIQ + YRTL GQ V F+I G KG Sbjct: 5 NSMLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKG 64 Query: 62 PAAANVII 69 A ++ Sbjct: 65 LHATDIRP 72 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 ++G+VKWFN +KGFGFI G DVFVHF AI RTL EGQKVTF + G KGP A Sbjct: 33 VSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 65 ANVIIT 70 NV I Sbjct: 92 ENVSIV 97 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 42/64 (65%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNA+KGFGFI G DVF HFS I D YR L EGQ+V+F + G KGP A N Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 67 VIIT 70 ++ Sbjct: 64 IVPA 67 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 98.9 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ ++ G VKWFN G+GFI+ D +D+FVH +AI +N R++ EG+ V F + Sbjct: 13 LAERVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVV 72 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 73 VGEKGREAANVTGPD 87 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 98.9 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S + TG VKWF+ KGFGFI+P DG +D+FVH ++I++D +RTL EG+ V F+++ G G Sbjct: 4 SKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDG 63 Query: 62 P-AAANVIIT 70 A V Sbjct: 64 RTKAVEVTAV 73 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 98.9 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 34/61 (55%), Positives = 43/61 (70%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KGFGFI P DG +D+F H+S IQ + YR+L GQ+VTF ++ G KG A N Sbjct: 4 GKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAEN 63 Query: 67 V 67 + Sbjct: 64 I 64 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 87 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 146 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 147 EGEKGAEAANVTGPD 161 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFNA+KG+GFI+ DGS DVFVHFSAIQ D Y+TL EGQ VTF +E +GP A Sbjct: 3 HGTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAV 61 Query: 66 NV 67 NV Sbjct: 62 NV 63 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 97.8 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 43/64 (67%), Positives = 49/64 (76%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWFNA+KGFGFI DG DVFVHFSAIQ D Y++L EGQ+V F I GA+GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 65 ANVI 68 ANV+ Sbjct: 60 ANVV 63 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFNA KGFGFI+ +G+ DVFVHFSAI+ + Y+ L EG +V F + G KGPAA Sbjct: 69 EGTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPAAD 127 Query: 66 NVIIT 70 NV + Sbjct: 128 NVELL 132 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ + G VKWFN G+GFI+ D D+FVH +A+ +N R+L +G+KV F + Sbjct: 54 VARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVV 113 Query: 57 SGAKGPAAANVIITD 71 G KGP AANV + Sbjct: 114 EGQKGPEAANVTGPN 128 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++NK++G VKWFN +G+GFI D +DVFVH +AIQ +N R++ + + V F + Sbjct: 25 VANKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVL 84 Query: 57 SGAKGPAAANVIITD 71 SG KG AANV + Sbjct: 85 SGPKGLEAANVTGPN 99 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFN KGFGFI +G DVFVH+SAIQ+ ++TL+EGQ+V+F +++G KGPAA Sbjct: 27 EGKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAV 85 Query: 66 NVIIT 70 NV Sbjct: 86 NVKPI 90 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFN +KG+GFI+P G D+FVHF AI+ + +++L EGQKVTF G K Sbjct: 1 MAERQNGTVKWFNDEKGYGFITPESG-ADLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQK 59 Query: 61 GPAAANVIIT 70 G A V + Sbjct: 60 GLQADQVQVV 69 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 39/61 (63%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G KWFN KG+GF++P DG ++VFVH S IQ +R+L E ++V F + ++G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 67 V 67 V Sbjct: 101 V 101 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 56 VATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 115 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 116 EGEKGAEAANVTGPD 130 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 46/71 (64%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFNA KGFGFI P DGS+++FVH + I +R+++EG++V + ++ Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDF 60 Query: 61 GPAAANVIITD 71 P A NV D Sbjct: 61 APKAVNVTGPD 71 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 96.2 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 42/65 (64%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI+P G D+F HFS +Q + +++L EGQKV + G KGPAA Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 66 NVIIT 70 + Sbjct: 122 KIEPI 126 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 96.2 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +M G VKWFN KG+GFIS + KDVFVH+S + + +++L EG +V F + GAKGP Sbjct: 19 EMKGTVKWFNNQKGYGFIS-DESGKDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 64 AANVI 68 A NV Sbjct: 78 ATNVT 82 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 96.2 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 42/64 (65%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + TG VKWFN+ KGFGFI+P G+KDVFVH SA++ L + QKVTF IE G G Sbjct: 51 TEMATGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDG 110 Query: 62 PAAA 65 AA Sbjct: 111 REAA 114 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 96.2 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + G VKWF+ KGFGFI+P DG +D+FVH S I+++ +R+L EG+ V F +ESG G Sbjct: 7 QRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGR 66 Query: 63 -AAANVIITD 71 A +V D Sbjct: 67 TKAVDVTGPD 76 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 96.2 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWF+ +KG+GFI+ G DVFVHFSAIQ++ ++TL EGQ V F I GA+GP A Sbjct: 1 MVGKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 65 ANVIIT 70 ANVI T Sbjct: 60 ANVIKT 65 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 96.2 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 41/66 (62%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G KG A+ Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 Query: 66 NVIITD 71 ++ + Sbjct: 63 VIVPVE 68 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 96.2 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MS +M G+VKWFN KGFGFI+P G D+FVHF AIQ +++L EGQKVTF G K Sbjct: 1 MSERMNGIVKWFNDAKGFGFITPESG-PDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQK 59 Query: 61 GPAAANVIIT 70 G A V Sbjct: 60 GMQADQVQAV 69 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG- 61 +K+ G VKWF+A KGFGF+ P DGS +VFVH SAI + +R+L +G+ V F + G Sbjct: 40 DKIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGK 99 Query: 62 PAAANVIITD 71 A NV D Sbjct: 100 WKALNVTGPD 109 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 43/63 (68%), Positives = 50/63 (79%), Gaps = 1/63 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNADKG+GFI+ DG+ DVFVHFSAIQ D ++TL EGQKVTF ES +GP AAN Sbjct: 4 GTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 67 VII 69 V+ Sbjct: 63 VVP 65 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 42/65 (64%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 +G+VKWFNA+KGFGFI G DVF H+S I +R L EGQKV F I G KGP A Sbjct: 3 SGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAE 62 Query: 66 NVIIT 70 N++ Sbjct: 63 NIVPA 67 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 40/63 (63%), Positives = 47/63 (74%), Gaps = 1/63 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFNA+KGFGFI +G DVFVHFSAIQ D +++L EGQ VTF +E G +GP AA Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 66 NVI 68 NV Sbjct: 62 NVQ 64 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++++++G VKWFN G+GFI+ D +DVFVH +AI +N R++ +G+KV F + Sbjct: 29 IASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVV 88 Query: 57 SGAKGPAAANVIITD 71 G KG AANV + Sbjct: 89 EGEKGNEAANVTGPE 103 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 95.1 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 31/55 (56%), Positives = 35/55 (63%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 TG VKWFN KGFGFI P G DVFVH SA+Q TL EGQKV++ I + Sbjct: 44 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 43/65 (66%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFNA+KGFGFI+P D DVFVH+S IQ ++TL E +V F I GAKGP A Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQAT 62 Query: 66 NVIIT 70 V + Sbjct: 63 GVTLV 67 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 + ++ +G KWFN KG+GFI P +G D+FVH +AI+ +R+L EG++V F +E A Sbjct: 20 LPDRQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDAT 79 Query: 61 GP-AAANVIITD 71 G A NV + Sbjct: 80 GRKKARNVTGPN 91 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 95.1 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWFN++KGFGFI G DVFVHFSAIQ D ++TL EGQ+V+F I G +GP Sbjct: 1 MQTGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQ 59 Query: 64 AANVI 68 AANV Sbjct: 60 AANVT 64 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 94.7 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWF+ KG+GFI DG DVFVHFSAI+ + ++TL EGQ+V F+I G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 65 ANVI 68 A+V+ Sbjct: 60 ADVV 63 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 94.7 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + TG VKWFN +KGFGF+S D DVFVH+ AI RTL EGQKV+FS+ G KG Sbjct: 3 APQHTGTVKWFNDEKGFGFLSR-DNDSDVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKG 61 Query: 62 PAAANVIIT 70 AANV Sbjct: 62 LLAANVTPL 70 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 94.7 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MS + +G VKWFN +KGFGFI+P G D+FVHF AIQ + +++L EGQKVTF G K Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQK 59 Query: 61 GPAA 64 G A Sbjct: 60 GMQA 63 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 94.7 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ ++ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 90 LAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVV 149 Query: 57 SGAKGPAAANVIIT 70 G KG A NV Sbjct: 150 EGEKGAEATNVTGP 163 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 94.3 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSN+ G VKWFN KGFGFI+P G+ D+FVHF +IQ +++L EGQKV+F + +G K Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQK 59 Query: 61 GPAAANVIIT 70 G A V + Sbjct: 60 GLQADEVQVV 69 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + TG+V+WF+ KGFGFI+P +G +D+FVH S+I++D +R+L EG+ V F I G G Sbjct: 4 ERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGR 63 Query: 63 -AAANVIITD 71 A +V D Sbjct: 64 TKAVDVTGPD 73 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 50/64 (78%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 +TG VKWFN++KGFGFI DG+ DVFVHFSAI D +++L EGQ+V+F +E G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 65 ANVI 68 NV+ Sbjct: 62 KNVV 65 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 1/63 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFNADKGFGFI+ +GS DVFVHFSAIQ D +++L EGQ V F +E +GP A Sbjct: 3 HGTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAV 61 Query: 66 NVI 68 NV Sbjct: 62 NVT 64 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 34/62 (54%), Positives = 41/62 (66%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN KG+GFI+P G KDVFVH SA+Q R+L EGQ++ F IE G A Sbjct: 32 MLHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRA 91 Query: 64 AA 65 AA Sbjct: 92 AA 93 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWF++ KG+GFI+ +G DVFVH+SAI+ + ++TL EGQ V F I+ G KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 65 ANVIITD 71 A+V + + Sbjct: 60 AHVKVVE 66 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 37/63 (58%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFNA+KGFGFI G DVFVHFSAI + Y++L EGQ V F + G +GP AA Sbjct: 3 QGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAA 61 Query: 66 NVI 68 NV+ Sbjct: 62 NVV 64 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 21 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVV 80 Query: 57 SGAKGPAAANVIIT 70 G KG AANV Sbjct: 81 EGEKGAEAANVTGP 94 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 3/66 (4%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW++ +KG+GFI+ DG D+FVH SAI L EG +V F + S KGP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGSE---LNEGDRVEFDVTSSPKGPRAE 59 Query: 66 NVIITD 71 +V +T+ Sbjct: 60 HVRVTE 65 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFNA+KGFGFI+ G DVFVH+SAI +R+L E Q V F + G GP A Sbjct: 3 TGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQAE 61 Query: 66 NV 67 NV Sbjct: 62 NV 63 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI G DVF HFSAI +D ++TL EGQ+V F++ G KGP A Sbjct: 5 TGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAE 63 Query: 66 NVIIT 70 N++ Sbjct: 64 NIVCI 68 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 93.9 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 44/66 (66%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 G VKWF+ DKG+GFI+ D + DVFVHF+ IQ + ++TL +GQKV F + KGP A Sbjct: 3 FRGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRA 62 Query: 65 ANVIIT 70 NV + Sbjct: 63 KNVRVL 68 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFN KGFGFI G + +FVHF AI+ R L +GQ V F++ KG A Sbjct: 114 EGTVKWFNVKKGFGFIVRDSGDE-IFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQAD 172 Query: 66 NVIIT 70 NV I Sbjct: 173 NVSIL 177 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+TG+VKWFN G+GFI+ D +DVFVH SAI +N R++ +G++V F + Sbjct: 84 IATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVV 143 Query: 57 SGAKGPAAANVIIT 70 G KG AANV Sbjct: 144 IGEKGNEAANVTGP 157 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 K G+VKWFN KG+GFI +DVFVHFSAIQ+ Y+TL EG+ V F + G KG Sbjct: 21 KENGVVKWFNGAKGYGFIQR-STGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 64 AANVI 68 AANV+ Sbjct: 80 AANVV 84 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND---NYRTLFEGQKVTFSIES 57 ++ K+TG VKWFN G+GFI+ D +DVFVH SAI N+ R++ +G+ V F + Sbjct: 59 IATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVI 118 Query: 58 GAKGPAAANVIIT 70 G KG AANV Sbjct: 119 GEKGNEAANVTGP 131 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MS + G+VKWFN KGFGFI G +D+FVHF AIQ D YR+L +G+KV FS+ G K Sbjct: 1 MSAREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDK 59 Query: 61 GPAAANVIITD 71 G A V + Sbjct: 60 GLQAEEVRRVE 70 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 45/70 (64%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S +M+G VKW++ KGFGF+S DG KDVFVH SA+ +L EGQ+VT + G KG Sbjct: 173 STEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKG 232 Query: 62 PAAANVIITD 71 A ++ + + Sbjct: 233 REAQSITVAE 242 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 35/64 (54%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN +KGFGF+ DGS D F+H A++ + L G ++T G KGP N+ Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 68 IITD 71 D Sbjct: 125 TSVD 128 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVD-GSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + G VKWFN KGFGFI+ +D+FVHFSAI+ D Y+TL GQKV F + G KG Sbjct: 1 MIEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGL 60 Query: 63 AAANV 67 A + Sbjct: 61 QAIKI 65 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND--NYRTLFEGQKVTFSIESG 58 M+ + G VKWFN +KG+GFI +G KDVFVHF + +L EGQKVTF + G Sbjct: 1 MAELLDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEG 60 Query: 59 AKGPAAANVIIT 70 KGP A NV Sbjct: 61 QKGPQAENVTPL 72 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 45/65 (69%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG V+WFNA++GFGF++P DGS D+FVH S I D +R L EGQ+V+F++ G A Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQAR 114 Query: 66 NVIIT 70 +V I Sbjct: 115 DVRIA 119 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ + G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 26 IATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 85 Query: 57 SGAKGPAAANVIIT 70 AKG AANV Sbjct: 86 EAAKGSEAANVTGP 99 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFNA+KG+GFI DG DVFVH+SAI+ D ++TL EGQKV F + KGP Sbjct: 1 MVRGKVKWFNAEKGYGFIEREDG-TDVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQ 59 Query: 64 AANVIITD 71 A+ V + Sbjct: 60 ASKVRKVN 67 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 +S K+TG+VKWFN G+GFI+ D +D+FVH SAI +N R++ +G+ V F + Sbjct: 24 ISVKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVV 83 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 84 EGEKGHEAANVTGPD 98 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAI--QNDNYRTLFEGQKVTFSIESGAKGP 62 +TG VKWF+ +KG+GF++ D DVFVHFSAI ++TL +GQ+V F ++ +KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 63 AAANVIIT 70 A NV + Sbjct: 63 RAKNVRVL 70 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGAK 60 + G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + AK Sbjct: 3 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAK 62 Query: 61 GPAAANVIIT 70 G AANV Sbjct: 63 GSEAANVTGP 72 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 92.4 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ + G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 17 IATGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 76 Query: 57 SGAKGPAAANVIIT 70 AKG AANV Sbjct: 77 EAAKGSEAANVTGP 90 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN DKGFGFI +G +D+FVHF A+ + + L EGQKV + I G KGP Sbjct: 77 REVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQ 135 Query: 64 AANVIITD 71 A V+I D Sbjct: 136 AEQVVILD 143 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFN KGFGFI +G + +FVH +I + R+L +G V + + + KGP A Sbjct: 125 EGTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAE 183 Query: 66 NVIITD 71 V D Sbjct: 184 EVEALD 189 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 M ++ G+VKWFN G+GFI+ D S D+FVH SAI +N R+L EG++V F + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 SGAKGPAAANVIIT 70 G KG A+ V Sbjct: 82 EGDKGDEASEVTGP 95 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG-PA 63 ++G+ KWF++ KGFGFI+P DGS+D+FVH I+ + +R+L + ++V + IE+ KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 64 AANVIITD 71 A NV + Sbjct: 71 AVNVSGPN 78 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 M ++ G+VKWFN G+GFI+ D S D+FVH SAI +N R+L EG++V F + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 SGAKGPAAANVIIT 70 G KG A+ V Sbjct: 82 EGDKGDEASEVTGP 95 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND-NYRTLFEGQKVTFSIESGA 59 M+ + G+VKWF+A KG+GFI +G D+FVH+S I ++ ++TL GQ V F + G Sbjct: 1 MAAR-RGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGP 59 Query: 60 KGPAAANVIITD 71 KG A NV+ D Sbjct: 60 KGLHARNVVPLD 71 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 30/60 (50%), Positives = 39/60 (65%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KG+GF++P DG KDVFVH SA++ Y +L EG KV + + + G AA Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KGFGFI +G +DVFVH S I +++L EG KVTF IE G KGPAA N Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 67 VIIT 70 V + Sbjct: 63 VTVV 66 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 40/71 (56%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +S ++TG+VKWF+A KG+GFI P +G DV VH S ++ L EG VT K Sbjct: 34 VSFEITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPK 93 Query: 61 GPAAANVIITD 71 G A V+ D Sbjct: 94 GAQAIRVVDVD 104 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 34/60 (56%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +VKWFN +G+GF++ +G+ D+F+H ++ R L GQ++ G KG A + Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 4/74 (5%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIES 57 + K+ G VKWFN G+GFI+ D ++D+FVH +AI N+N R+L + ++V F I Sbjct: 18 ATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVE 77 Query: 58 GAKGPAAANVIITD 71 G+KG AA+V D Sbjct: 78 GSKGLEAASVTGPD 91 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ ++ G+VKWFN G+GFI +D +DVF+H SAI +N R++ EG+ V F + Sbjct: 32 LATRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLV 91 Query: 57 SGAKGPAAANVIIT 70 +GAKG AANV Sbjct: 92 AGAKGTEAANVTGL 105 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 92.0 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 28/55 (50%), Positives = 36/55 (65%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 TG VKWFN +KGFGFI+P DG D FVH SA++ L EGQKV + + + + Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKR 104 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 91.6 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWFN +KG+GFIS +G DVFVHFSAI + Y+TL EGQ V F + +G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 65 ANVI 68 NV Sbjct: 60 VNVR 63 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 91.6 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 45/68 (66%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S +MTG VKW++ KGFGF+S DG KDVFVH SA+ +L EGQ+VT + G KG Sbjct: 212 SVEMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKG 271 Query: 62 PAAANVII 69 A+++ + Sbjct: 272 REASSITV 279 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 34/64 (53%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN +KGFGF+ DGS D F+H A++ + L G ++T G KGP V Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 Query: 68 IITD 71 D Sbjct: 141 NSVD 144 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 91.2 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 40/70 (57%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G VKW+N +KGFGFI+ G KDVFVH + + L EGQ+V + G KG Sbjct: 168 TEERVGTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKG 227 Query: 62 PAAANVIITD 71 P A + + D Sbjct: 228 PEARGIEVAD 237 Score = 74.7 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 36/64 (56%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN +KGFGF+ DGS DVF+H A++ ++ G K++ + G KG V Sbjct: 69 TVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVTEV 128 Query: 68 IITD 71 + D Sbjct: 129 LEVD 132 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 91.2 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KG+GFI DG +DVFVH+S I D YR L EG+ V + ++ G KG AA Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 66 NVIITD 71 V D Sbjct: 62 QVKSRD 67 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 91.2 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M ++ G VKWFN +KG+GFI G KDVFVH SAI +TL EGQKV + GAK Sbjct: 1 MGTQVEGTVKWFNEEKGYGFIEQK-GGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAK 59 Query: 61 GPAAANVIIT 70 G A +V Sbjct: 60 GLQAEDVTPL 69 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 91.2 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VK+FNA+KG+GFI+ G +D+FVH+SAI D Y+TL EGQ+V+F + G +G AA Sbjct: 3 TGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAA 61 Query: 66 NVIIT 70 NV Sbjct: 62 NVRGI 66 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG- 61 ++ G VKWF+ KGFGFI+P DG D+FVH S+I+++ +R+L + V F +E G Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72 Query: 62 PAAANVIITD 71 P A V D Sbjct: 73 PKAIEVSGPD 82 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 2/65 (3%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA--KGP 62 TG VK+FNA KGFGFI+P +G KDVFVH SA++ R+L +GQKV+F +E KGP Sbjct: 3 QTGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGP 62 Query: 63 AAANV 67 A N+ Sbjct: 63 KAVNL 67 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Query: 7 GLVKWFNADKGFGFISPVDGSK---DVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G KWFN+ +G+GFI+P S+ DVFVH S+I + +R+L EG +V F + KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 64 AANVIIT 70 A V+ Sbjct: 89 AVKVVGP 95 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 3/66 (4%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA--KGPAA 64 G VKWFNA+KG+GFI +GS+DVF HFSAIQ ++ L EG +V F IE G KGP A Sbjct: 4 GKVKWFNAEKGYGFIE-TEGSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 65 ANVIIT 70 N+++T Sbjct: 63 RNIVVT 68 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 5/74 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ F + Sbjct: 55 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVV 113 Query: 57 SGAKGPAAANVIIT 70 G KG AANV Sbjct: 114 EGGKGAEAANVTGP 127 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 31/55 (56%), Positives = 38/55 (69%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 TG VKWFNA KGFGFI P DGS DVFVH SA++ R L +GQK+++ + K Sbjct: 4 TGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRK 58 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++NK+TG VKWFN G+GFI+ D +DVFVH SAI +N R++ +G+ V F + Sbjct: 20 IANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVV 79 Query: 57 SGAKGPAAANVIIT 70 G KG AANV Sbjct: 80 IGEKGHEAANVTGP 93 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 89.7 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 39/63 (61%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KG+GFI S D+F HFS++Q D Y+TL GQ VTF + KG A N Sbjct: 4 GKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAIN 63 Query: 67 VII 69 ++ Sbjct: 64 IVP 66 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 89.7 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 5/75 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ + G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 26 IATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVI 85 Query: 57 S-GAKGPAAANVIIT 70 KG AANV Sbjct: 86 EAAKKGSEAANVTGP 100 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 89.7 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VK+FN DKGFGFI+ DG DVFVHFS IQ D ++TL EGQ V++ ++ ++G Sbjct: 25 MLNGTVKFFNVDKGFGFIAGQDG-VDVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQ 83 Query: 64 AANVIIT 70 A NV+ Sbjct: 84 AINVVAI 90 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + TG V WFNA KG+GFI+P DGS ++FVH S+I ++ YR+L G V F+I G+ G Sbjct: 8 AARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDG 67 Query: 62 P-AAANVIIT 70 A NV Sbjct: 68 KTKAVNVTAP 77 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 88.9 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW++A KGFGF++ DG + VF+H SA+ TL GQ+V F I G KG A Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGGE-VFLHASALPP-GTTTLRPGQRVEFGIVEGRKGTQAL 60 Query: 66 NVIITD 71 V + D Sbjct: 61 QVRLLD 66 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 88.5 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 32/55 (58%), Positives = 39/55 (70%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +G VKWFN+ KGFGFI P DG+ DVFVH SA++ R+L EGQKVT+ I K Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 88.5 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW++A KGFGF++ DG + VFVH SA+ +L GQ+V F + G +G A Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALP-SGVTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 66 NVIITD 71 +V D Sbjct: 65 SVRTLD 70 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 88.5 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 + +G VKWFN KGFGFI P DG +DVFVH SA+ L EG +V + +E + Sbjct: 53 LRRMASGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRR 112 Query: 61 --GPAAANVIIT 70 AA ++++T Sbjct: 113 SGKLAATSIVVT 124 Score = 83.9 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK--GPA 63 +G+VKWFN KGFGFI P G +D+FVH SA++ L EGQ V F +E + + Sbjct: 183 SGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRRSGKTS 242 Query: 64 AANVIIT 70 A N+ IT Sbjct: 243 ATNLKIT 249 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 88.2 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 +S ++ G V WF KG+GFIS D +DVFVH +AI N ++ +G+ V F + Sbjct: 64 ISKRVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVV 123 Query: 57 SGAKGPAAANVIIT 70 G G AANV Sbjct: 124 QGEWGTEAANVTGP 137 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN KGFGFI+ DG +++FVHF +I + R L +GQ+V+F + KGP Sbjct: 80 REEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQ 138 Query: 64 AANVIIT 70 A NV Sbjct: 139 AENVEPL 145 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 2/63 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN-YRTLFEGQKVTFSIESGAKGPAA 64 G VKWFNA KGFGFIS D DVFVH++AI+++ YR L E Q+V F I G KG A Sbjct: 3 KGKVKWFNATKGFGFISTEDQG-DVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQA 61 Query: 65 ANV 67 NV Sbjct: 62 CNV 64 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 8/73 (10%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVH--------FSAIQNDNYRTLFEGQKVTFSIESG 58 G KWFN KG+GFI+P +G DVFVH S + D +R+L G++V F I Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 59 AKGPAAANVIITD 71 +G A V+ + Sbjct: 71 PEGNEATAVVSAE 83 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 87.8 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQ-NDNYRTLFEGQKVTFSIESGAKGPAA 64 TG VKWFN++KGFGFI G DVFVHF+AIQ N+ + L EGQKV F +E G KG A Sbjct: 3 TGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQA 61 Query: 65 ANVI 68 ANV+ Sbjct: 62 ANVV 65 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 87.8 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDG-SKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 + K+ G+ +WFN DKGFGF+ +D S+D+F H + I+ + +R+L EG++V F++ G Sbjct: 9 CTEKIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGE 68 Query: 60 KGPAAANVI 68 KGP A ++ Sbjct: 69 KGPQAIEIV 77 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN-----YRTLFEGQKVTFSI 55 ++ + G VKW++ + +GFIS DG KD+FVH +AI RTL + ++V F + Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDL 121 Query: 56 ESGAKGPAAANVIITD 71 G GP AANV + Sbjct: 122 VEGKNGPEAANVTGPN 137 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA--KGP 62 TG VK+FN +KGFGFI P DG D+FVH SA+Q L + QKV++ E KGP Sbjct: 15 QTGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGP 74 Query: 63 AAANVIIT 70 A N+ IT Sbjct: 75 KAVNITIT 82 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +S ++ G+VK F+A GF FI+P DGS+D+F+H S+++ D YR+L + + S+ S Sbjct: 2 VSERVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDD 61 Query: 61 GP-AAANVIIT 70 G A +V Sbjct: 62 GRTKAVDVTAP 72 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 87.0 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +S ++ G VK F+A GFGFI+P D +D+F+H S+++ D+YR+L + + S+ SG Sbjct: 2 VSERVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGND 61 Query: 61 GP-AAANVIIT 70 G A +V Sbjct: 62 GRNKAVDVTAL 72 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGAK 60 +TG VKWFN +G+GF+ D +D+F+H SAI N +++ EG+++ F I GAK Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 61 GPAAANVIITD 71 G AANV D Sbjct: 89 GNEAANVSAID 99 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 31/60 (51%), Positives = 43/60 (71%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN+ KGFGFI+P DG KDVFVH SA++ + L + QK+ + ++SG G ++A Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSA 77 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA--KG 61 + +G VK+F DKGFGFI+P +G DVFVH SA++ TL GQ+++F E KG Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 62 PAAANVIITD 71 P A + + D Sbjct: 181 PKAVELRLED 190 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 36/67 (53%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 G KWF+ K +GF++P DGS DVFVH I+ YR+L ++V + + KG A Sbjct: 63 YRGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREA 122 Query: 65 ANVIITD 71 V D Sbjct: 123 TTVTGVD 129 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQ-NDNYRTLFEGQKVTFSIESGAKGPAA 64 T VKWF+A KG+GFI D +DVFVH+S IQ +D+++TL Q V F + G KG A Sbjct: 3 TSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHA 62 Query: 65 ANVIITD 71 V D Sbjct: 63 LEVAPLD 69 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK-GPAA 64 TG VKWFN KG+GFI P +G KDVFVH SA++ R L EGQK+++ + + + G A Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGKDA 62 Query: 65 A 65 A Sbjct: 63 A 63 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 41/64 (64%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWF+ D+GFGFI P +G +++F H I + Y+TL Q+VT+ +E G G A Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 66 NVII 69 N+I Sbjct: 64 NIIP 67 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNY-RTLFEGQKVTFSIESGAKGPA 63 G VKWFN DKG+GFI P DGSKDVFVH + + + L EG++V++ +E KG + Sbjct: 3 QRGRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLS 62 Query: 64 AANV 67 A NV Sbjct: 63 AMNV 66 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 86.2 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVD-GSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 S K++G +KWF+ KG+GFI P G D+ +H ++++ D ++T EG ++ + G + Sbjct: 23 SLKVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDR 82 Query: 61 GPAAANVIITD 71 G V+ D Sbjct: 83 GLQCFRVLSMD 93 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 86.2 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 27/62 (43%), Positives = 38/62 (61%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFN KG+GFI +D+F+H+S+I D Y+TL GQ V+F G +G A Sbjct: 3 HGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAV 62 Query: 66 NV 67 ++ Sbjct: 63 DI 64 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 85.8 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 38/64 (59%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G+VKWFN KGFGFIS D+F H+S I+ D YR+L GQKV F + KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 67 VIIT 70 +I Sbjct: 64 IIPI 67 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 85.8 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWFN KGFGFIS DG KD F+HFS I ++T+ EG++V F IE G KGP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 65 ANVI 68 NV+ Sbjct: 60 TNVV 63 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 85.8 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 7/69 (10%) Query: 6 TGLVKWFNADKGFGFI-------SPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 +G+ KWFN GFGFI +P+D + DVFVH S + + +R+L EG+ + FS + Sbjct: 5 SGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKS 64 Query: 59 AKGPAAANV 67 +KG A V Sbjct: 65 SKGLEAVRV 73 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 85.8 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 40/70 (57%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G VKWF+A +GFGFI+ DV VHFS +++ RTL EG ++ + + +G Sbjct: 31 AETVVGAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRG 90 Query: 62 PAAANVIITD 71 A ++ D Sbjct: 91 LQARRILAID 100 Score = 64.3 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 32/61 (52%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +VKWFN KG+GF+ ++D+F+H ++ L ++ I G KGP A + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 68 I 68 I Sbjct: 196 I 196 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 85.8 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 3/68 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND-NYRTLFEGQKVTFSIESGA 59 MS K VKWF+ KG+GFI DG +D+FVHFSAI ++ +++ L + +V F I+ Sbjct: 1 MSRKS--KVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQ 58 Query: 60 KGPAAANV 67 KG A NV Sbjct: 59 KGMQAKNV 66 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 85.5 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 43/69 (62%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G+VK+F+A+KGFGF++ G KDVFVH A++ +TL GQ+V + G KG Sbjct: 132 TETVEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKG 191 Query: 62 PAAANVIIT 70 P A V I Sbjct: 192 PQADTVAII 200 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 39/67 (58%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 ++ VKWFNA KGFGF++P DGS D F+H SA++ + EG + + +G +GP Sbjct: 49 VSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGPQV 108 Query: 65 ANVIITD 71 V D Sbjct: 109 VMVHEVD 115 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 2/67 (2%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQN--DNYRTLFEGQKVTFSIESGAKGPA 63 G V+WF+A++GFGF++ DG+ D+FVH S I D ++L EGQ V F I G +GP Sbjct: 3 QGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQ 62 Query: 64 AANVIIT 70 A V IT Sbjct: 63 ARRVQIT 69 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 V W++A KGFGF++P G D FVH ++ L EG +V+FS+ G +GP A +V Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 68 IIT 70 + Sbjct: 223 RVV 225 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G+V ++A++GFGFI+P G D+FVH S ++ + L+EG +V F + +GP A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQAD 312 Query: 66 NV 67 V Sbjct: 313 RV 314 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 G V W+ KG+GF++P G ++F H SAI + EGQ+V F + G KGP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 36/70 (51%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S ++ G VKWF+ KG+GFI+ G +DV +H S ++ T EG VT KG Sbjct: 11 SREIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKG 70 Query: 62 PAAANVIITD 71 A +I + Sbjct: 71 LQATRIINLE 80 Score = 70.4 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 34/63 (53%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWF+ KG+GF++ + ++D+FVH ++ L GQ++ S G KG AA + Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 68 IIT 70 Sbjct: 168 EPP 170 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 5/76 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 +++ +G+VKWFN G+GF++ D +DVF+H +AI +N R++ +G+ V F + Sbjct: 22 LASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVV 81 Query: 57 SGAKG-PAAANVIITD 71 G KG P AANV + Sbjct: 82 EGEKGLPEAANVTGPN 97 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 7/74 (9%) Query: 4 KMTGLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIE 56 + TG KWFN GFGFIS P+D DVFVH S + + +R+L EG+ V F+ + Sbjct: 29 RGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFK 88 Query: 57 SGAKGPAAANVIIT 70 +KG + V Sbjct: 89 KSSKGLESIRVTGP 102 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP- 62 K G+V WFN KGFGF++ DG DVFVH S I + +R+L + + V F +E G Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGRY 102 Query: 63 AAANVIITD 71 A V D Sbjct: 103 KAVKVTGPD 111 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 84.7 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 2/67 (2%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA--KGPA 63 TG+VK+FN DKGFGFI P +G D+FVH SA+Q L E QKV+F E KGP Sbjct: 4 TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPK 63 Query: 64 AANVIIT 70 A N+ I Sbjct: 64 AVNLQIA 70 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 84.7 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 39/68 (57%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 ++ G VKWF DKGFGF++ DG KDVFVH S ++ +L G++V + KG Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGRE 191 Query: 64 AANVIITD 71 A + + D Sbjct: 192 ATWIQLLD 199 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 34/63 (53%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN KGFGF++P DG+ D F+H S + L EG +V I G KGP + Sbjct: 46 TVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQVIRL 105 Query: 68 IIT 70 + Sbjct: 106 VDV 108 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 39/63 (61%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 K +G VK+FNA KGFGFI DG D FVH SA++ +L EG +++F +E +G Sbjct: 233 EKSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGK 292 Query: 63 AAA 65 AA Sbjct: 293 YAA 295 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 27/62 (43%), Positives = 40/62 (64%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG+VK+FN+ KGFGF+ DG +DVFVH SA++ L EGQ ++F++ +A Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSAT 196 Query: 66 NV 67 N+ Sbjct: 197 NL 198 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 37/63 (58%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + +G VK+FNA KGFGFI DG D FVH SA++ L EG ++ F +E +G Sbjct: 83 ERASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGK 142 Query: 63 AAA 65 AA Sbjct: 143 YAA 145 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA-- 59 + + G KWFN KG+GF+ +D+FVH S + +R+L EG++V++ I+ + Sbjct: 50 TPRYFGSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNG 109 Query: 60 KGPAAANV 67 KG A V Sbjct: 110 KGREAYAV 117 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 36/64 (56%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G V WF+A+KGFGFI+P D S VFV F AI+ YRTL G V + E GP A Sbjct: 53 HGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAV 112 Query: 66 NVII 69 V Sbjct: 113 AVRP 116 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 83.5 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 43/68 (63%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +++G++KWF+A KG+GF+ P +G DV +H + ++ D Y+T +EG ++ AKG Sbjct: 68 EISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQ 127 Query: 64 AANVIITD 71 A ++ D Sbjct: 128 AFRIVSMD 135 Score = 68.9 bits (168), Expect = 5e-11, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVI 68 VKWFN +GFGF++ +G+ D+FVH ++ L GQ V G+KG AA + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEIQ 224 Query: 69 I 69 Sbjct: 225 P 225 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 83.5 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ KM G VKWFN +G+GFISP DG DV+V+ +AI N ++L EGQ V FS Sbjct: 1 MTLKM-GRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIH 59 Query: 61 GPAAANVI 68 GP+AA+VI Sbjct: 60 GPSAADVI 67 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK--GPAA 64 G+VKWFN KGFGFI P DG +DVFVH +A++ L EG +VT+ +E + +A Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRRSGKTSA 63 Query: 65 ANVIIT 70 N+ +T Sbjct: 64 GNLRVT 69 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 2/65 (3%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK--GPAAA 65 +VKWFN+ KGFGFI P +G D+FVH SA++ R L EGQ+V + +E + +A Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRRSGKTSAG 174 Query: 66 NVIIT 70 N+ I Sbjct: 175 NLRIL 179 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G +KWFNA KGFGFI+ DG++ VFVHF ++ + R + GQ+V + + +GP A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 66 NV 67 +V Sbjct: 119 DV 120 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 7/72 (9%) Query: 6 TGLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 TG KWFN GFGFIS P+D DVFVH S + + +R+L EG+ V F+ + Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 59 AKGPAAANVIIT 70 +KG + V Sbjct: 117 SKGLESIRVTGP 128 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 82.4 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 4/66 (6%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 TG VK+FN KGFGFI D+FVH SA+ + + E KV FSIE G KG A Sbjct: 137 QTGTVKFFNETKGFGFIKSDSSGDDIFVHVSALIDQ----IHENDKVRFSIEHGRKGLNA 192 Query: 65 ANVIIT 70 N+ + Sbjct: 193 VNIKLL 198 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 82.4 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M++K+ G VKWFN KG GFI D DVFVH+ +I ++ ++TL +GQ V+F I Sbjct: 1 MTDKLKGTVKWFNDSKGVGFIQR-DNEADVFVHYKSIVSEGHKTLKKGQAVSFFITENDF 59 Query: 61 GPAAANVII 69 G A+ V + Sbjct: 60 GRQASEVAL 68 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 42/65 (64%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG+VK + ++G+G+I+P G +DVFVHF+ I ++ L +G+KV++ + G K P AA Sbjct: 3 TGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAA 62 Query: 66 NVIIT 70 V Sbjct: 63 QVQPI 67 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 35/67 (52%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKW++ KGFGFI+P G KD FVH +A+ L EGQ V G KG Sbjct: 133 ECEGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGLE 192 Query: 64 AANVIIT 70 ++ + Sbjct: 193 VLSIRLV 199 Score = 49.6 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVI 68 V WFNA KGFGF+ +DG++ ++ ++ R + EG ++ +IE +G V Sbjct: 47 VMWFNAGKGFGFVKLLDGTE-AYLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQVTKVR 105 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND---NYRTLFEGQKVTFSIESGAKGPA 63 G VKW+N KG+GFI D +DVFVH SAI ++L E + V F + G+KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 64 AANVIITD 71 A NV + Sbjct: 65 AMNVTGPN 72 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 81.2 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 ++ G+ KWFN KG+GFI+ +G +DVFVH S I D +R+L E +KV + Sbjct: 2 TRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNRK 60 Query: 63 AAANVIITD 71 A +V + Sbjct: 61 KAIHVTGPN 69 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 80.8 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW+++DKGFGF+S +G +DV+V SA+ L GQ+V F I SG +GP A Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALP-AGVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 66 NVIITD 71 ++ + D Sbjct: 111 SLKLLD 116 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 80.8 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 36/65 (55%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI P +G DVFVH + ++ TL E KV + + AA Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 66 NVIIT 70 N+ + Sbjct: 69 NIQLL 73 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 80.8 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW++A+KGFGF+S DG +DV+V SA+ L GQ+V F + +G +GP A Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALP-AGVEALKSGQRVEFGVAAGRRGPQAL 73 Query: 66 NVIITD 71 ++ + D Sbjct: 74 SLKLID 79 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 80.8 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G V WFN KGFGFI+ DG DVFVH++ I D +++L G++V++++ P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDG-LDVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 64 AANVIITD 71 A +V + D Sbjct: 61 AVDVHLAD 68 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 80.8 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G +KWFNA KGFGFI DG++ VFVH+ ++ R++ +GQ+V +S+ + +GP A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 66 NVIIT 70 V Sbjct: 134 GVKAV 138 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 80.8 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 38/69 (55%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFN K FGFI +G KDVFVH SA+ L EGQ V F +E Sbjct: 1 MTTNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNG 60 Query: 61 GPAAANVII 69 +A N+ I Sbjct: 61 KISAVNLRI 69 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG-PA 63 G KWF++ KGFGFI+ DG D+FVH + I+ +R L EG+ V F ++ G G Sbjct: 88 QRGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRK 146 Query: 64 AANVIITD 71 A +V + Sbjct: 147 AVSVTGPN 154 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 6/73 (8%) Query: 5 MTGLVKWFNADKGFGFISPVDG-SKDVFVHFSAIQNDN-----YRTLFEGQKVTFSIESG 58 + G VKW++ +GFI+ D DVFVH +AI RTL +G++V F I G Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 59 AKGPAAANVIITD 71 +GP AANV + Sbjct: 66 KQGPEAANVTGPN 78 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWF+ +G+GF+ P +G DVF+H S + ++ L EG ++ F IE KG A Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDE---DLEEGDRLEFEIEETEKGLNAV 59 Query: 66 NV 67 N+ Sbjct: 60 NI 61 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 7/72 (9%) Query: 6 TGLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 +G+ KWFN GFGF+S +D DVFVH S + + +R+L EG+ V F+ + Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 59 AKGPAAANVIIT 70 +KG + V Sbjct: 95 SKGLESLQVTGP 106 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 34/64 (53%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN KGFGF+S DG++D+FVH ++ L G+++ G KG A V Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 68 IITD 71 D Sbjct: 195 RPLD 198 Score = 78.1 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +++G +KWF+ KG+GF+ +G DV +H +A++ D + EG +V G KG Sbjct: 32 EISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQ 91 Query: 64 AANVIITD 71 VI D Sbjct: 92 VFRVISLD 99 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVDGS----KDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 ++TG VKWF+A KG+GFI P D + KDV +H +++++ EG +T + Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 60 KGPAAANVIITD 71 KG A V+ D Sbjct: 86 KGWQVAEVVDLD 97 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN KG+GF+ D+FVH ++ L G+ V G KG A + Sbjct: 137 KVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEI 196 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 78.9 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + TG V WF+ +K +GFI+ G+ +FVH A+ D R L EG++V+F + G K Sbjct: 1 MNERSTGTVAWFDPEKSYGFITTHAGAS-LFVHRRAL-GDGRRWLVEGEEVSFVVVRGMK 58 Query: 61 GPAAANVIIT 70 G A +V++T Sbjct: 59 GDEANDVLVT 68 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 78.9 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 3/70 (4%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND--NYRTLFEGQKVTFSIESGAKG 61 K G +WF+ DKG+GFI DG KD+FVH+S+IQ + +TL E KV F+++ G +G Sbjct: 5 KEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63 Query: 62 PAAANVIITD 71 A +V++ + Sbjct: 64 AQAVDVVVVN 73 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 78.9 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN +KGFGFI D +++FVHF A+QN R+L G KV F +G Sbjct: 10 QQRGEVKWFNPNKGFGFIL-TDSGEELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQ 68 Query: 64 AANVII 69 A NV I Sbjct: 69 ADNVYI 74 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 7/71 (9%) Query: 7 GLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 G+ KWFN GFGF+S +D DVFVH S + + +R+L EG+ V F+ + A Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 60 KGPAAANVIIT 70 KG + V Sbjct: 102 KGLESIRVTGP 112 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S + G VKWF+ +KG+GF+ G +D+FVH S ++ D +L +G +V + + +G Sbjct: 131 SQREQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGDA-SSLGQGVEVEYEVGRNERG 188 Query: 62 PAAANVIIT 70 P A V + Sbjct: 189 PNARRVRVL 197 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 78.1 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 4/67 (5%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGAKG 61 G VK+F A KGFGFI P DG +DVFVH++ I++D ++ L+EG +V ++ S KG Sbjct: 3 QGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKG 62 Query: 62 PAAANVI 68 A +V+ Sbjct: 63 TQAKDVV 69 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 6/62 (9%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRT------LFEGQKVTFSI 55 S + G VKWFN KGFG+I+P DG DVFVH SA++ + +R +G V F + Sbjct: 8 SARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDV 67 Query: 56 ES 57 E Sbjct: 68 EH 69 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 39/63 (61%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWF+ G+GFISP DG D++VH +AI N ++L GQ V FS GP+A Sbjct: 5 KGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHGPSAE 64 Query: 66 NVI 68 +VI Sbjct: 65 DVI 67 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 37/55 (67%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 G VK+FN DKG+GFI DGS D FVH +A+Q TL + Q+V++ +E+G G Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNG 80 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G+V F+ +GFGFI S+DVFVH I+ ++L GQKV F E KG +A Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQ--QSLSPGQKVEFDTEQTDKGLSA 58 Query: 65 ANVII 69 NVI Sbjct: 59 INVIP 63 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 35/64 (54%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VK F++ GFGFI FV ++AI+ Y++L GQ+V + + G KG Sbjct: 3 TGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQCI 62 Query: 66 NVII 69 NV I Sbjct: 63 NVYI 66 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + G VKWF+ KG+GFI+ +G K+ FVH S I +R L G++V++ +++ KG Sbjct: 10 ATVEHGTVKWFDPVKGYGFIAGDNG-KETFVHQSDILMRGFRHLETGERVSYRVKATEKG 68 Query: 62 PAAANVI 68 A +VI Sbjct: 69 DKAIDVI 75 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G + F+ +G+GFI+P +G +DVF+H + + D R L G KV F +E G +G A+ Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 67 VIITD 71 V I + Sbjct: 68 VRIQN 72 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 32/43 (74%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTL 45 + G VKWF+ KGFGFI+P DG D+FVH S+I+++ +R+L Sbjct: 9 ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN-YRTLFEGQKVTFSIE-SGAKG 61 + G V F+ KGFGFI P DG +D+FVH SAI++D YR+L E V F++ S Sbjct: 13 RSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDNK 72 Query: 62 PAAANVIIT 70 A +V Sbjct: 73 YQAVDVTAP 81 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 33/62 (53%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG V F+ KG+GFI+P G +DVF+H S + + L G +V F G +G A Sbjct: 3 TGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTKAM 62 Query: 66 NV 67 V Sbjct: 63 TV 64 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQ-NDNYRTLFEGQKVTFSIESGAKGPAA 64 G +K+F+ +GFGFI P+DGS+DVF+H + I + L EGQ + + E KG +A Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSA 62 Query: 65 ANVIITD 71 N D Sbjct: 63 LNAAPAD 69 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG-P 62 TG VK+FNA+KG+GFI P DG+ D+F+H + D R +V + + G G Sbjct: 1 MQTGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRL 59 Query: 63 AAANVIITD 71 A V + D Sbjct: 60 RAERVALID 68 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 75.8 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +TG V F+ +G+GFI+P DGS DVFVH + + D + L G V + +GP Sbjct: 7 MLTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERGPK 65 Query: 64 AANVIIT 70 A V ++ Sbjct: 66 AVLVRVS 72 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 75.8 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 37/65 (56%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 K+ G+VKWF+ KGFGF++ DG D+ +H + ++N ++ EG V I+ +G Sbjct: 9 RKIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGM 68 Query: 63 AAANV 67 A V Sbjct: 69 QAVEV 73 Score = 63.5 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 31/60 (51%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWF+ KGFGF + DVF+H +++ + L G+ + + G +G AA + Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 75.8 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND-NYRTLFEGQKVTFSIESGAKG 61 + TG V F+ KGFGFI P G KD+FVH SAI++D YRTL+E V F+I Sbjct: 12 ERSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDK 71 Query: 62 PAAANVIIT 70 A +V Sbjct: 72 YQAVDVTAP 80 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 75.4 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 4 KMTGLVKWFNADKGFGFISPV-DGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 ++TG++KWF++ KG+GF++P D+ +H S +Q D ++T EG KV S++ +G Sbjct: 13 EITGIIKWFDSSKGYGFVTPDFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKRGL 72 Query: 63 AAANVIITD 71 V D Sbjct: 73 KCIQVKSID 81 Score = 67.7 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 33/62 (53%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +VKWFN DKGFGF+S G++D+F+H ++ L GQ V G KG A + Sbjct: 109 IVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKGLMTAEI 168 Query: 68 II 69 Sbjct: 169 YP 170 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 75.4 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TGLVKWF+ KGFGF+ +G D+ +H + ++N ++ +G ++ + +G A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 66 NVIIT 70 V Sbjct: 72 QVHAI 76 Score = 64.3 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWF+ KGFGF + S D+F+H ++ L G+ + + G +G AA V Sbjct: 107 RVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 Query: 68 I 68 Sbjct: 167 H 167 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 4/68 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VK+FN KGFGFI D ++D+FVH S + ++ + E +V F +E G KG Sbjct: 1 MQEGKVKFFNNTKGFGFIKADDSNEDIFVHSSGLIDE----IREDDRVQFEVEQGKKGLN 56 Query: 64 AANVIITD 71 A NV + D Sbjct: 57 AVNVEVID 64 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVD----GSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 +++G VKWF+ KG+GFI P D G KDV +H ++++N T EG + + Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 60 KGPAAANVIITD 71 KG + V+ D Sbjct: 77 KGWQVSEVVDLD 88 Score = 68.1 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 26/61 (42%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN KG+GF+ D+FVH ++ L G V G KG A + Sbjct: 137 KVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVAEI 196 Query: 68 I 68 Sbjct: 197 T 197 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 37/65 (56%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G V+ F+A+KG+G+I P G ++ VHFSAI L GQ V+F I +GP A Sbjct: 3 EGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAE 62 Query: 66 NVIIT 70 V I+ Sbjct: 63 RVQIS 67 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAI----QNDNYRTLFEGQKVTFSIES 57 + ++TG VKWFN GFGFI+ D +D+FVH S+I + R++ EG+ V F + + Sbjct: 49 NKRITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGVIA 108 Query: 58 GA 59 Sbjct: 109 TK 110 >UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XTJ6_CAEEL Length = 294 Score = 74.7 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Query: 1 MSNKMTGLVKWFNADKGFGFISPV---DGSKDVFVHFSAIQNDN-----YRTLFEGQKVT 52 + + G VKWF+ +GF++ D ++D FVH +AI + RTL + + V Sbjct: 85 IETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVV 144 Query: 53 FSIESGAKGPAAANVIITD 71 F I G KGP AANV D Sbjct: 145 FDIVEGLKGPEAANVTGPD 163 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 37/71 (52%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M ++ T VKWFNA KGFGF+ DG D F+H S +Q Y L EG + + G K Sbjct: 1 MLSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQK 60 Query: 61 GPAAANVIITD 71 G + + + Sbjct: 61 GMQVSEIYEVE 71 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 43/68 (63%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 ++ G+VK+F+ADKGFGF+ P G KDV+V +Q+ L +GQ+V SI G KGP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 63 AAANVIIT 70 A ++ + Sbjct: 203 MAGSLELI 210 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +TG V F+ +G+GFI+P G DVFVH + + D + L G V + +GP Sbjct: 1 MLTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPK 59 Query: 64 AANVIIT 70 A V + Sbjct: 60 ALTVRVL 66 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 +TG + WF+ G+GFI P DG D+ V A+ R+L +GQ+V + + G Sbjct: 1 MLTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTRPRFG 58 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLF---EGQKVTFSIES 57 M M G VKWFN +KG+GFI D K+ FVH+ +I ++ R L + + VTF + Sbjct: 1 MRFNMKGKVKWFNKNKGYGFIITDDN-KEYFVHWKSIVTNSPRELKVLEQDELVTFDLME 59 Query: 58 GAKGPAAANVI 68 KG A N+I Sbjct: 60 TDKGIQAINII 70 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 4/66 (6%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA- 65 G V+W++ KG+GFI DG KDVF+ +A+ ++L +G +V FS+ G KGP A Sbjct: 4 GRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQAMG 61 Query: 66 -NVIIT 70 NVI T Sbjct: 62 LNVIAT 67 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 33/64 (51%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWF+ KGFGF + S+DVFVH ++ + L G+ V + G +G AA V Sbjct: 116 RVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAAEV 175 Query: 68 IITD 71 D Sbjct: 176 RTWD 179 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 39/71 (54%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 + + G+VKWF+ KGFGF+ +G D+ +H + +++ ++ EG +V ++ + Sbjct: 18 ICPTVAGVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGR 77 Query: 61 GPAAANVIITD 71 G A +I + Sbjct: 78 GLQAVEIIAIE 88 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNY-RTLFEGQKVTFSIESGAKGPA 63 TG VKW+++++G+GF+S DG +DVF+H S I+ + + + EG+ + F I KGPA Sbjct: 4 YTGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEKGPA 62 Query: 64 AANVI 68 A NV Sbjct: 63 AINVH 67 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 73.1 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 37/64 (57%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +V+WF+ G+G I+ D ++VF+ F+AI + YRT+ V F + G GP A NV Sbjct: 1 MVRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 Query: 68 IITD 71 ++ Sbjct: 61 QKSE 64 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 73.1 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 38/70 (54%), Gaps = 3/70 (4%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSK-DVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 S G V WF+A KGFGFI P +G + VFV FS+I+ YRTL EGQ V F +G Sbjct: 12 STWYHGTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRFVRSAGR- 70 Query: 61 GPAAANVIIT 70 A V Sbjct: 71 -AEAVAVRPL 79 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 73.1 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 ++G V ++ ++GFGF++P G DVF+H + I D +L G KV+F +E +G A Sbjct: 7 VSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDE-SSLKPGAKVSFDVEETDRGAKA 65 Query: 65 ANVIITD 71 NV +T+ Sbjct: 66 VNVAVTE 72 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 73.1 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 + G+V WFN KGFGFI + +D++VH+S + D ++TL G+KV F + P A Sbjct: 3 LKGVVSWFNDIKGFGFIV-DEAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 65 ANVIITD 71 V I + Sbjct: 62 TAVRIIN 68 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 73.1 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 K++G VK + +DKGFGFI + G DVFVHFSAIQ R L GQ+V + G +GP Sbjct: 2 EKISGYVKTWQSDKGFGFIE-LKGEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRGP 60 Query: 63 AAANVIITD 71 AA V + D Sbjct: 61 QAAAVEVLD 69 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G++ W++ +KG+GFI P G DVFVH S+++++ + L G + + G Sbjct: 107 NKRARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAG 166 Query: 62 -PAAANVIIT 70 A NV Sbjct: 167 KLQAINVTAP 176 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G+V F+ KG+GFI+P +G +DVFVH + + TL G +V F + G +G A Sbjct: 3 QGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPG-TTLTSGTRVVFDVLDGGRGLKAY 61 Query: 66 NVIIT 70 +V + Sbjct: 62 DVSLA 66 >UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Maricaulis maris MCS10 RepID=Q0APJ7_MARMM Length = 174 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +VKWF+A +G+GF++ + DVF+H + ++ + + G ++ G KG AA + Sbjct: 109 VVKWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168 Query: 68 IIT 70 + Sbjct: 169 KVA 171 Score = 69.3 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 ++ G VKW++ +G+GFI DG D+ +H S ++ K+ G KG Sbjct: 15 ELEGRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKGRQ 74 Query: 64 AANVI 68 A ++ Sbjct: 75 AVELV 79 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG+VK+FN KG+GFI D ++D+FVH + + T+ E +V F + G KG Sbjct: 1 MQTGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNG---ITIREKDRVQFEVVDGKKGLN 57 Query: 64 AANVIITD 71 A V D Sbjct: 58 AVKVKKID 65 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G+VK+FN KGFGFI+ KD FVH S + ++ + EG +V F ++ G KG A Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGLIDE----VREGDEVEFELKEGNKGLNAV 58 Query: 66 NVIIT 70 NV + Sbjct: 59 NVRVL 63 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 11/73 (15%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNY----RTLFEGQKVTFSIES 57 S ++TG VKWFNA GFGFI+ D +D+FVH S I N +++ +G+ V F Sbjct: 31 SKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEF---- 86 Query: 58 GAKGPAAANVIIT 70 G A+ V Sbjct: 87 ---GLIASKVTGP 96 >UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae RepID=C6A7D6_BIFLB Length = 147 Score = 72.4 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 +G ++WF+A KG+GFI+ DG KDVF+ +A+ R +G KV +S+ G +G A Sbjct: 21 SGRIRWFDAKKGYGFIAGDDG-KDVFLPQTALPQ-GVRNPRKGAKVEYSVIEGNRGQVAM 78 Query: 66 NVIIT 70 V + Sbjct: 79 GVTMV 83 >UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQP4_RHORT Length = 70 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI+P DG D FVH SA++ + R+ G + S + + P A+ Sbjct: 3 TGTVKWFNVQKGFGFIAPDDGGSDAFVHISAVERSSDRSP-PGYRCRESRDRKRRWPGAS 61 Query: 66 N 66 Sbjct: 62 R 62 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 7/68 (10%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFE------GQKVTFSIESGAKGP 62 V WFN +G+G++ P DGS+DVFVH S +Q D +R+++E G ++ F ++ + Sbjct: 44 VTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDDER-R 102 Query: 63 AAANVIIT 70 A NV Sbjct: 103 RAKNVTGP 110 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 71.2 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ KM G VKW++ G G ISP+DG D++V+ + I + + L EGQ+V FS G + Sbjct: 1 MTLKM-GFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRR 59 Query: 61 GPAAANVI 68 A +VI Sbjct: 60 SQMAEDVI 67 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 71.2 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 7/75 (9%) Query: 3 NKMTGLVKWFNADKGFGFISPVD----GSKDVFVHFSAIQNDN-YRTLFEGQKVTFSIE- 56 +K+ G VKWF++ KG+GF++P ++++FVH ++IQ++ YRTL E ++ F +E Sbjct: 2 SKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVEK 61 Query: 57 SGAKGP-AAANVIIT 70 G A NV Sbjct: 62 EAESGKFKAINVTAP 76 >UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q475L4_RALEJ Length = 195 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ +++G +K +N DKGFGFI+P +G +D+FVH S G+ +TF + Sbjct: 8 MNTRISGTLKSWNKDKGFGFIAPSNGGRDIFVHISDYPRQGGMP-KIGESLTFLVTLNQD 66 Query: 61 GP-AAANVI 68 G A NV Sbjct: 67 GKNKAINVQ 75 >UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmataceae RepID=B9KHN5_ANAMF Length = 92 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 13/79 (16%) Query: 5 MTGLVKWFNADKGFGFISPVD-------------GSKDVFVHFSAIQNDNYRTLFEGQKV 51 TG VKWF+ +KG+GFI G KDVFVH +++Q L EGQ+V Sbjct: 12 YTGHVKWFSVEKGYGFICKDGSDDGKSGGASFGRGDKDVFVHITSLQRSRIDNLREGQRV 71 Query: 52 TFSIESGAKGPAAANVIIT 70 + ++ +A N+ + Sbjct: 72 RYQLDESNGKVSAVNLEVL 90 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 36/65 (55%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG +KWF+ KG+GFI+ DG DVF+H S + N TL G ++ + + +A Sbjct: 3 TGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVLGRQGNKVSAH 62 Query: 66 NVIIT 70 ++ + Sbjct: 63 DLSLM 67 >UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALH9_DESPS Length = 204 Score = 70.4 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG-PAAA 65 G +K +N +KG+GFI+P +G DVF+H A + +R GQ +++ SG KG A Sbjct: 4 GTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHRP-EIGQVISYGTTSGDKGRLRAC 62 Query: 66 NVIITD 71 NV + Sbjct: 63 NVQYME 68 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 70.4 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VK F+ KG+GFI+ + +FVH+S I+ R L ++V+ I G KGP Sbjct: 1 MLKGKVKSFDEQKGWGFITVPHEGE-IFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 64 AANVIIT 70 AA+V + Sbjct: 60 AAHVRVL 66 >UniRef50_C8WB38 Cold-shock DNA-binding domain protein n=3 Tax=Zymomonas mobilis RepID=C8WB38_ZYMMN Length = 189 Score = 70.4 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 32/63 (50%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 +TG VKWF+ KGFGF+ G D+ +HFS +Q R L EG V +G A Sbjct: 28 ITGYVKWFDIIKGFGFLIGSKGEGDILIHFSLLQEYGKRFLPEGSWVKCLARRSRQGWKA 87 Query: 65 ANV 67 + Sbjct: 88 HKI 90 Score = 60.8 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 VKWFN KG+GF+ +D+FVH A + G+ + + KG +A Sbjct: 123 TVKWFNRTKGYGFLIRNADQQDIFVHAEAFHAAGIKKFEAGKSLYACLRQSDKGLSA 179 >UniRef50_UPI0001AF6C46 cold-shock DNA-binding protein family protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6C46 Length = 99 Score = 70.4 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 37/70 (52%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MS G++ WF+ ++GFGF+ P DG +DVF+ S I + + EGQ V++ Sbjct: 30 MSTVSYGVINWFDDERGFGFVHPADGDRDVFIDSSEIVDWPAGGVHEGQHVSYQTGGTRH 89 Query: 61 GPAAANVIIT 70 P A V I Sbjct: 90 WPRAQAVHIL 99 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 70.4 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 ++ G +K +N ++GFGFI PV G +D+FVH A + R GQ VTF +E G G Sbjct: 2 RLDGKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPSGTGRPTV-GQAVTFEVELGPNGKK 60 Query: 64 AAN 66 A Sbjct: 61 RAR 63 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 7 GLVKWFNADKGFGFISPV---DGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 G +KW+N DKG+GFI+P + DVF+H SA+ + L EGQ VT+ Sbjct: 5 GSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQND 60 >UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Bacteria RepID=CSPA_YEREN Length = 46 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 36/46 (78%), Positives = 43/46 (93%) Query: 15 DKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 DKGFGFI+P DGSKDVFVHFSAIQ+++++TL EGQKV FSIE+GAK Sbjct: 1 DKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G + F++ +GFGFI P DG DVFVH + I D L +G+ F + G +GP A N Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDIGLDEDE-LRQGRVFEFDVTEGDRGPKAIN 64 Query: 67 V 67 + Sbjct: 65 L 65 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 33/64 (51%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VK F+++ +GFI FV + +I+ + Y+ L GQ+V + + G KG Sbjct: 3 KGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQCI 62 Query: 66 NVII 69 NV + Sbjct: 63 NVYV 66 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 69.3 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VK+FN KGFGFI + K+ FVH S + ++ + E +VTF +E G KG A N Sbjct: 4 GTVKFFNNSKGFGFIIEKESGKEYFVHVSGLVDE----IRENDEVTFELEKGKKGLNAVN 59 Query: 67 VIIT 70 V + Sbjct: 60 VKLV 63 >UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYK4_RHOSR Length = 79 Score = 68.9 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 13 NADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 N +KGFGF +P G VFVHFS I ++TL EGQ + + + G KG A N Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKGVQAEN 75 >UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cellular organisms RepID=CSPA_PHOPO Length = 46 Score = 68.9 bits (168), Expect = 5e-11, Method: Composition-based stats. Identities = 26/46 (56%), Positives = 35/46 (76%) Query: 15 DKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +KGFGFI+ +G DVFVHF AI ++ ++TL EGQKV+F +E G K Sbjct: 1 EKGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQGQK 46 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 108 5e-23 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 106 3e-22 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 106 3e-22 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 105 3e-22 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 105 5e-22 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 104 7e-22 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 103 1e-21 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 102 3e-21 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 101 7e-21 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 101 7e-21 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 100 1e-20 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 100 1e-20 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 100 1e-20 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 100 1e-20 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 100 2e-20 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 100 2e-20 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 99 3e-20 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 99 3e-20 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 99 4e-20 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 99 4e-20 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 98 7e-20 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 98 8e-20 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 98 9e-20 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 97 1e-19 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 97 1e-19 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 97 1e-19 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 97 2e-19 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 97 2e-19 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 97 2e-19 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 97 2e-19 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 97 2e-19 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 96 2e-19 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 96 3e-19 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 96 3e-19 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 95 4e-19 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 95 5e-19 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 95 6e-19 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 95 8e-19 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 95 9e-19 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 94 1e-18 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 94 1e-18 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 94 1e-18 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 94 2e-18 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 94 2e-18 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 94 2e-18 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 93 2e-18 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 93 2e-18 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 93 3e-18 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 93 3e-18 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 93 3e-18 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 92 4e-18 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 92 4e-18 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 92 5e-18 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 92 5e-18 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 92 5e-18 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 92 5e-18 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 92 5e-18 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 92 6e-18 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 92 7e-18 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 92 7e-18 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 92 7e-18 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 92 7e-18 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 92 7e-18 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 91 8e-18 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 91 8e-18 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 91 9e-18 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 91 9e-18 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 91 9e-18 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 91 1e-17 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 91 1e-17 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 91 1e-17 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 91 1e-17 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 91 1e-17 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 91 1e-17 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 90 1e-17 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 90 1e-17 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 90 1e-17 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 90 2e-17 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 90 2e-17 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 90 2e-17 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 90 2e-17 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 90 2e-17 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 90 2e-17 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 90 2e-17 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 90 2e-17 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 90 2e-17 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 90 2e-17 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 90 2e-17 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 89 3e-17 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 89 3e-17 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 89 3e-17 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 89 4e-17 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 89 4e-17 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 89 4e-17 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 89 4e-17 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 89 5e-17 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 89 5e-17 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 89 5e-17 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 88 7e-17 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 88 7e-17 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 88 7e-17 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 88 7e-17 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 88 7e-17 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 88 7e-17 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 88 8e-17 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 88 8e-17 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 88 9e-17 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 87 1e-16 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 87 1e-16 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 87 1e-16 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 87 2e-16 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 87 2e-16 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 87 2e-16 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 87 2e-16 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 86 3e-16 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 86 3e-16 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 86 3e-16 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 86 3e-16 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 86 3e-16 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 86 4e-16 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 85 5e-16 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 85 5e-16 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 85 7e-16 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 85 7e-16 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 85 8e-16 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 85 9e-16 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 84 9e-16 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 84 1e-15 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 84 1e-15 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 84 1e-15 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 84 1e-15 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 84 2e-15 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 84 2e-15 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 84 2e-15 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 84 2e-15 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 84 2e-15 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 84 2e-15 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 84 2e-15 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 83 2e-15 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 83 2e-15 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 83 2e-15 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 83 2e-15 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 83 2e-15 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 83 2e-15 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 83 3e-15 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 83 3e-15 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 82 4e-15 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 82 6e-15 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 82 7e-15 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 82 7e-15 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 82 7e-15 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 82 8e-15 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 81 8e-15 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 81 8e-15 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 81 1e-14 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 81 1e-14 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 80 1e-14 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 80 1e-14 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 80 2e-14 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 80 2e-14 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 80 2e-14 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 80 2e-14 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 80 2e-14 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 80 2e-14 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 80 2e-14 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 79 3e-14 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 79 4e-14 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 79 5e-14 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 79 5e-14 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 79 5e-14 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 79 6e-14 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 79 6e-14 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 79 6e-14 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 79 6e-14 UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ra... 78 8e-14 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 78 8e-14 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 78 9e-14 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 77 1e-13 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 77 1e-13 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 77 1e-13 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 77 1e-13 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 77 2e-13 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 77 2e-13 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 77 2e-13 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 77 2e-13 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 77 2e-13 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 77 2e-13 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 76 3e-13 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 76 3e-13 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 76 3e-13 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 76 3e-13 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 76 3e-13 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 76 3e-13 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 76 4e-13 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 76 4e-13 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 75 4e-13 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 75 5e-13 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 75 5e-13 UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfot... 75 5e-13 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 75 6e-13 UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Be... 75 6e-13 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 75 6e-13 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 75 7e-13 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 75 8e-13 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 75 8e-13 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 75 8e-13 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 75 9e-13 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 74 1e-12 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 74 1e-12 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 74 1e-12 UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Me... 74 1e-12 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 74 1e-12 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 74 2e-12 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 74 2e-12 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 74 2e-12 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 74 2e-12 UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=De... 74 2e-12 UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Pr... 73 2e-12 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 73 2e-12 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 73 2e-12 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 73 3e-12 UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=St... 73 3e-12 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 73 3e-12 UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Ac... 73 3e-12 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 72 4e-12 UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Bu... 72 4e-12 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 72 4e-12 UniRef50_Q12K82 Putative uncharacterized protein n=1 Tax=Shewane... 72 4e-12 UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=B... 72 4e-12 UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aroma... 72 5e-12 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 72 5e-12 UniRef50_A6C742 Cold-shock DNA-binding domain n=1 Tax=Planctomyc... 72 6e-12 UniRef50_UPI0001AEC17A integral membrane protein n=1 Tax=Alterom... 72 6e-12 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 72 6e-12 UniRef50_A6W4V4 Putative cold-shock DNA-binding domain protein n... 72 6e-12 UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Sa... 72 7e-12 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 72 7e-12 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 72 7e-12 UniRef50_A4SJX6 Cold-shock protein, DNA-binding n=2 Tax=Aeromona... 71 8e-12 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 71 8e-12 UniRef50_C0QJI8 CspG n=2 Tax=Desulfobacterium autotrophicum HRM2... 71 9e-12 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 71 1e-11 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 71 1e-11 UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript eviden... 71 1e-11 UniRef50_Q7WXG5 Putative uncharacterized protein n=2 Tax=Cupriav... 70 1e-11 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 70 1e-11 UniRef50_Q84IJ3 Cold shock protein n=1 Tax=Janthinobacterium sp.... 70 2e-11 UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 70 2e-11 UniRef50_C0WQD2 Possible cold-shock protein n=3 Tax=Lactobacillu... 70 2e-11 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 70 2e-11 Sequences not found previously or not previously below threshold: >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFN +KG+GFI+P G D+FVHF AI+ + +++L EGQ+VTF G K Sbjct: 97 MAERQKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQK 155 Query: 61 GPAAANVIIT 70 G A V Sbjct: 156 GMQADKVQPV 165 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 43/69 (62%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + TG VKWFN KGFGFI+P +G DVF HFS I +R+L E Q+V+F I G KG Sbjct: 42 NKMATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKG 101 Query: 62 PAAANVIIT 70 A+N+ Sbjct: 102 KQASNIQPI 110 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP- 62 ++TG VKWFN KGFGFI+P DG D+FVH S+I+++ +R+L EG+ V F +ES G Sbjct: 3 RVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGRT 62 Query: 63 AAANVIITD 71 A +V D Sbjct: 63 KAVDVTGPD 71 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 105 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 39/69 (56%), Positives = 49/69 (71%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSN+ TG VKWFN +KGFGFI+P G D+FVHF AI++D +++L EGQ V+F E G K Sbjct: 22 MSNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQK 81 Query: 61 GPAAANVII 69 G AA V Sbjct: 82 GMQAAQVRP 90 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S ++ G VKWF+A KGFGFI+P DG +D+FVH S++++D YR+L +G V FS+ SG G Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDG 62 Query: 62 P-AAANVIIT 70 A NV Sbjct: 63 RTKAVNVTAP 72 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 47/70 (67%), Positives = 57/70 (81%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ K+TGLVKWFN +KGFGFI+P DGSKDVFVHFSAIQ++ +RTL E Q+V FS E G K Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPK 60 Query: 61 GPAAANVIIT 70 GP+A NV+ Sbjct: 61 GPSAVNVVAL 70 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 71/71 (100%), Positives = 71/71 (100%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 Query: 61 GPAAANVIITD 71 GPAAANVIITD Sbjct: 61 GPAAANVIITD 71 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 42/66 (63%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 N TG VKWFN KGFGFI+ G +DVF H +AI D +RTL EGQKV F + G KG Sbjct: 33 NMATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGL 92 Query: 63 AAANVI 68 A NV Sbjct: 93 QAQNVR 98 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 43/67 (64%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWFN KG+GFI +G +D+F H+SAI D Y+TL GQ+V+F I G KG Sbjct: 42 MPTGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLH 101 Query: 64 AANVIIT 70 A N++ Sbjct: 102 AINIVAP 108 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 45/65 (69%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWFN KGFGFI+P G +D+F HFSAI + ++TL EGQKV+F + G KG Sbjct: 1 MQTGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQ 60 Query: 64 AANVI 68 A+N+ Sbjct: 61 ASNIK 65 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 44/67 (65%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG+VKWFN KGFGFI P G D+F HFS I+ D +++L E Q+V F +++G KG Sbjct: 18 MQTGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQ 77 Query: 64 AANVIIT 70 AAN+ Sbjct: 78 AANITPL 84 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 34/71 (47%), Positives = 43/71 (60%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 + TG VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G K Sbjct: 21 CRSMETGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPK 80 Query: 61 GPAAANVIITD 71 G A+ ++ + Sbjct: 81 GNHASVIVPLE 91 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 48/67 (71%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + TG VKWF+A KG+GFI+ DG DVFVHFSAI+ + +++L +G KV F I +G KG Sbjct: 21 TKMYTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKG 80 Query: 62 PAAANVI 68 P AA V+ Sbjct: 81 PQAAKVV 87 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 51/66 (77%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG+VKWFNA+KG+GFI+P DGSKD+F H+S I ++ Y++L E Q+VTF + G KGP+ Sbjct: 1 MATGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPS 60 Query: 64 AANVII 69 A N+ + Sbjct: 61 AKNIKV 66 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 46/67 (68%), Positives = 54/67 (80%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ+V F I +GAKGP+ Sbjct: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 Query: 64 AANVIIT 70 AANVI Sbjct: 63 AANVIAL 69 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 53/70 (75%), Positives = 59/70 (84%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSNKMTGLVKWF+A KGFGFISP DGSKDVFVHFSAIQ ++Y+TL EGQ V FSIE G K Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 61 GPAAANVIIT 70 GP+A NV+ Sbjct: 61 GPSAVNVVAL 70 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 4/73 (5%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESG 58 K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + G Sbjct: 209 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 268 Query: 59 AKGPAAANVIITD 71 KG AANV D Sbjct: 269 EKGAEAANVTGPD 281 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 43/68 (63%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN KGFGFI P G +DVF HFSAI D +RTL +G +V+F + G KG Sbjct: 1 MVNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKL 60 Query: 64 AANVIITD 71 A N+ + Sbjct: 61 AQNIAPLE 68 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G VKWFN KGFGFIS G VFVHF AI+ + +R L EGQ+V F+I KG Sbjct: 172 AGREAGTVKWFNTSKGFGFISRDSGDD-VFVHFRAIRGEGHRILVEGQRVEFTIMMRDKG 230 Query: 62 PAAANVIITD 71 A +V+ + Sbjct: 231 LQAEDVVPVE 240 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYR----TLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R ++ +G+ V F + Sbjct: 84 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVV 143 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 144 EGEKGAEAANVTGPD 158 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 42/67 (62%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWFN KGFGFI+ DG DVF H +AIQ D +RTL EGQKV F G KG Sbjct: 1 MATGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQ 60 Query: 64 AANVIIT 70 A NV + Sbjct: 61 AENVRVV 67 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 97.8 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 87 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 146 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 147 EGEKGAEAANVTGPD 161 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ ++ G VKWFN G+GFI+ D +D+FVH +AI +N R++ EG+ V F + Sbjct: 13 LAERVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVV 72 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 73 VGEKGREAANVTGPD 87 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 44/67 (65%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFNA+KG+GFI+P D S DVFVHFSAIQ + ++ L E +V F + G KG Sbjct: 1 MAVGTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQ 60 Query: 64 AANVIIT 70 AANV Sbjct: 61 AANVTKL 67 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 46/71 (64%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFNA KGFGFI P DGS+++FVH + I +R+++EG++V + ++ Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDF 60 Query: 61 GPAAANVIITD 71 P A NV D Sbjct: 61 APKAVNVTGPD 71 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 44/68 (64%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 ++ ++G VKWFN KG+GFI G +D+F H+SAIQ + YRTL GQ V F+I G KG Sbjct: 5 NSMLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKG 64 Query: 62 PAAANVII 69 A ++ Sbjct: 65 LHATDIRP 72 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + G VKWF+ KGFGFI+P DG +D+FVH S I+++ +R+L EG+ V F +ESG G Sbjct: 7 QRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGR 66 Query: 63 -AAANVIITD 71 A +V D Sbjct: 67 TKAVDVTGPD 76 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + TG VKWFN KG+GFI DVFVH+ AI+ D +R+L EGQ+V FS+ G K Sbjct: 68 MAERETGTVKWFNDAKGYGFIQR-GNGADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQK 126 Query: 61 GPAAANVIIT 70 G A +V Sbjct: 127 GLQAEDVAGL 136 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 44/67 (65%), Positives = 50/67 (74%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ V F I+ G KGPA Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 Query: 64 AANVIIT 70 A NV Sbjct: 63 AVNVTAI 69 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S + TG VKWF+ KGFGFI+P DG +D+FVH ++I++D +RTL EG+ V F+++ G G Sbjct: 4 SKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDG 63 Query: 62 P-AAANVIIT 70 A V Sbjct: 64 RTKAVEVTAV 73 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ + G VKWFN G+GFI+ D D+FVH +A+ +N R+L +G+KV F + Sbjct: 54 VARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVV 113 Query: 57 SGAKGPAAANVIITD 71 G KGP AANV + Sbjct: 114 EGQKGPEAANVTGPN 128 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 96.3 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWFNA+KG+GFI+ DG KDVFVH+S+I ++ ++TL EGQ VT+ + +G Sbjct: 21 MSTGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQ 79 Query: 64 AANVIITD 71 A NV + D Sbjct: 80 ANNVTVVD 87 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 39/65 (60%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G+ KWFN+ KGFGF++P DG KDVFVH I+ D +R+L E + V F+ KG A Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEAT 131 Query: 66 NVIIT 70 V Sbjct: 132 LVTGP 136 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 36/63 (57%), Positives = 42/63 (66%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFNA+KGFGFI G DVF HFS I D YR L EGQ+V+F + G KGP A N Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 67 VII 69 ++ Sbjct: 64 IVP 66 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 41/67 (61%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G KG Sbjct: 1 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNH 60 Query: 64 AANVIIT 70 A+ ++ Sbjct: 61 ASLIVPL 67 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFN KGFGFI G + +FVHF AI+ R L +GQ V F++ KG A Sbjct: 114 EGTVKWFNVKKGFGFIVRDSGDE-IFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQAD 172 Query: 66 NVIIT 70 NV I Sbjct: 173 NVSIL 177 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 56 VATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 115 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 116 EGEKGAEAANVTGPD 130 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 94.7 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG- 61 +K+ G VKWF+A KGFGF+ P DGS +VFVH SAI + +R+L +G+ V F + G Sbjct: 40 DKIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGK 99 Query: 62 PAAANVIITD 71 A NV D Sbjct: 100 WKALNVTGPD 109 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 94.7 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++NK++G VKWFN +G+GFI D +DVFVH +AIQ +N R++ + + V F + Sbjct: 25 VANKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVL 84 Query: 57 SGAKGPAAANVIITD 71 SG KG AANV + Sbjct: 85 SGPKGLEAANVTGPN 99 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 ++G+VKWFN +KGFGFI G DVFVHF AI RTL EGQKVTF + G KGP A Sbjct: 33 VSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 65 ANVIIT 70 NV I Sbjct: 92 ENVSIV 97 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFN +KG+GFI+P G+ +FVHF AI+ + +++L EGQKVTF G K Sbjct: 1 MAERQNGTVKWFNDEKGYGFITPESGAD-LFVHFRAIEGNGFKSLKEGQKVTFVAVQGQK 59 Query: 61 GPAAANVIIT 70 G A V + Sbjct: 60 GLQADQVQVV 69 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + TG VKWFN +KGFGF+S + S VFVH+ AI RTL EGQKV+FS+ G KG Sbjct: 3 APQHTGTVKWFNDEKGFGFLSRDNDSD-VFVHYRAINTQGRRTLKEGQKVSFSLVEGQKG 61 Query: 62 PAAANVIIT 70 AANV Sbjct: 62 LLAANVTPL 70 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + TG+V+WF+ KGFGFI+P +G +D+FVH S+I++D +R+L EG+ V F I G G Sbjct: 4 ERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGR 63 Query: 63 -AAANVIITD 71 A +V D Sbjct: 64 TKAVDVTGPD 73 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ + G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 26 IATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 85 Query: 57 SGAKGPAAANVIIT 70 AKG AANV Sbjct: 86 EAAKGSEAANVTGP 99 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 + ++ +G KWFN KG+GFI P +G D+FVH +AI+ +R+L EG++V F +E A Sbjct: 20 LPDRQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDAT 79 Query: 61 GP-AAANVIITD 71 G A NV + Sbjct: 80 GRKKARNVTGPN 91 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 43/64 (67%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFN KGFGFI P DG +D+F H+S IQ + YR+L GQ+VTF ++ G KG Sbjct: 1 MAVGKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLH 60 Query: 64 AANV 67 A N+ Sbjct: 61 AENI 64 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKWFN KGFGFI +G + +FVH +I + R+L +G V + + + KGP A Sbjct: 125 EGTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAE 183 Query: 66 NVIITD 71 V D Sbjct: 184 EVEALD 189 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 93.2 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 40/64 (62%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFNA+KG+GFI+ DGS VFVHFSAIQ D Y+TL EGQ VTF +E +GP Sbjct: 1 MEHGTVKWFNAEKGYGFITREDGSD-VFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQ 59 Query: 64 AANV 67 A NV Sbjct: 60 AVNV 63 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN---YRTLFEGQKVTFSIES 57 ++ K+TG VKWFN G+GFI+ D +DVFVH SAI N+ R++ +G+ V F + Sbjct: 59 IATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVI 118 Query: 58 GAKGPAAANVIIT 70 G KG AANV Sbjct: 119 GEKGNEAANVTGP 131 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ ++ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 90 LAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVV 149 Query: 57 SGAKGPAAANVIIT 70 G KG A NV Sbjct: 150 EGEKGAEATNVTGP 163 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++++++G VKWFN G+GFI+ D +DVFVH +AI +N R++ +G+KV F + Sbjct: 29 IASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVV 88 Query: 57 SGAKGPAAANVIITD 71 G KG AANV + Sbjct: 89 EGEKGNEAANVTGPE 103 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 41/68 (60%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G KG Sbjct: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 Query: 64 AANVIITD 71 A+ ++ + Sbjct: 61 ASVIVPVE 68 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 21 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVV 80 Query: 57 SGAKGPAAANVIIT 70 G KG AANV Sbjct: 81 EGEKGAEAANVTGP 94 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ + G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 17 IATGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 76 Query: 57 SGAKGPAAANVIIT 70 AKG AANV Sbjct: 77 EAAKGSEAANVTGP 90 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+TG+VKWFN G+GFI+ D +DVFVH SAI +N R++ +G++V F + Sbjct: 84 IATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVV 143 Query: 57 SGAKGPAAANVIIT 70 G KG AANV Sbjct: 144 IGEKGNEAANVTGP 157 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFN KGFGFI +G VFVH+SAIQ+ ++TL+EGQ+V+F +++G KGPA Sbjct: 25 MPEGKVKWFNEQKGFGFIEKDEGGD-VFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPA 83 Query: 64 AANVIIT 70 A NV Sbjct: 84 AVNVKPI 90 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 3/68 (4%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKW++ +KG+GFI+ DG D+FVH SAI L EG +V F + S KGP Sbjct: 1 MTTGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGSE---LNEGDRVEFDVTSSPKGPR 57 Query: 64 AANVIITD 71 A +V +T+ Sbjct: 58 AEHVRVTE 65 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 92.0 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 42/67 (62%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWFN KGFGFI+P G D+F HFS +Q + +++L EGQKV + G KGPA Sbjct: 60 METGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPA 119 Query: 64 AANVIIT 70 A + Sbjct: 120 ATKIEPI 126 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 91.6 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWFN++KGFGFI G DVFVHFSAIQ D ++TL EGQ+V+F I G +GP Sbjct: 1 MQTGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQ 59 Query: 64 AANVI 68 AANV Sbjct: 60 AANVT 64 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 91.6 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 43/67 (64%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFNA+KGFGFI+P D DVFVH+S IQ ++TL E +V F I GAKGP Sbjct: 1 MAQGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQ 60 Query: 64 AANVIIT 70 A V + Sbjct: 61 ATGVTLV 67 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 91.6 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MS +M G+VKWFN KGFGFI+P G D+FVHF AIQ +++L EGQKVTF G K Sbjct: 1 MSERMNGIVKWFNDAKGFGFITPESG-PDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQK 59 Query: 61 GPAAANVIIT 70 G A V Sbjct: 60 GMQADQVQAV 69 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 91.6 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MS + G+VKWFN KGFGFI G +D+FVHF AIQ D YR+L +G+KV FS+ G K Sbjct: 1 MSAREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDK 59 Query: 61 GPAAANVIITD 71 G A V + Sbjct: 60 GLQAEEVRRVE 70 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 91.6 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFNA+KGFGFI +G VFVHFSAIQ D +++L EGQ VTF +E G +GP Sbjct: 1 MEQGTVKWFNAEKGFGFIERENGDD-VFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQ 59 Query: 64 AANVI 68 AANV Sbjct: 60 AANVQ 64 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 91.3 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 +S K+TG+VKWFN G+GFI+ D +D+FVH SAI +N R++ +G+ V F + Sbjct: 24 ISVKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVV 83 Query: 57 SGAKGPAAANVIITD 71 G KG AANV D Sbjct: 84 EGEKGHEAANVTGPD 98 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 91.3 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWFNA+KGFGFI DG VFVHFSAIQ D Y++L EGQ+V F I GA+GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDGDD-VFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 65 ANVIIT 70 ANV+ Sbjct: 60 ANVVKL 65 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGAK 60 + G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + AK Sbjct: 3 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAK 62 Query: 61 GPAAANVIIT 70 G AANV Sbjct: 63 GSEAANVTGP 72 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 42/64 (65%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + TG VKWFN+ KGFGFI+P G+KDVFVH SA++ L + QKVTF IE G G Sbjct: 51 TEMATGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDG 110 Query: 62 PAAA 65 AA Sbjct: 111 REAA 114 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + TG V WFNA KG+GFI+P DGS ++FVH S+I ++ YR+L G V F+I G+ G Sbjct: 8 AARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDG 67 Query: 62 P-AAANVIIT 70 A NV Sbjct: 68 KTKAVNVTAP 77 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 42/66 (63%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFNADKG+GFI+ DG+ VFVHFSAIQ D ++TL EGQKVTF ES +GP Sbjct: 1 MKNGTVKWFNADKGYGFITGEDGND-VFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQ 59 Query: 64 AANVII 69 AANV+ Sbjct: 60 AANVVP 65 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVD-GSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + G VKWFN KGFGFI+ +D+FVHFSAI+ D Y+TL GQKV F + G KG Sbjct: 1 MIEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGL 60 Query: 63 AAANV 67 A + Sbjct: 61 QAIKI 65 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 G VKWFNA KGFGFI+ +G+ VFVHFSAI+ + Y+ L EG +V F + G KGP Sbjct: 66 KMSEGTVKWFNASKGFGFIAQDNGND-VFVHFSAIKMEGYKALEEGARVRFDVVKGNKGP 124 Query: 63 AAANVIIT 70 AA NV + Sbjct: 125 AADNVELL 132 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MSN+ G VKWFN KGFGFI+P G+ +FVHF +IQ +++L EGQKV+F + +G K Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESGND-LFVHFRSIQGTGFKSLQEGQKVSFVVVNGQK 59 Query: 61 GPAAANVIIT 70 G A V + Sbjct: 60 GLQADEVQVV 69 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 42/66 (63%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +G+VKWFNA+KGFGFI G DVF H+S I +R L EGQKV F I G KGP Sbjct: 1 MASGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPT 60 Query: 64 AANVII 69 A N++ Sbjct: 61 AENIVP 66 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 5/75 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ + G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ V F + Sbjct: 26 IATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVI 85 Query: 57 S-GAKGPAAANVIIT 70 KG AANV Sbjct: 86 EAAKKGSEAANVTGP 100 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWFNA+KGFGFI+ G DVFVH+SAI +R+L E Q V F + G GP Sbjct: 1 MATGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQ 59 Query: 64 AANVII 69 A NV Sbjct: 60 AENVSP 65 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNY----RTLFEGQKVTFSIE 56 M ++ G+VKWFN G+GFI+ D S D+FVH SAI +N R+L EG++V F + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 SGAKGPAAANVIIT 70 G KG A+ V Sbjct: 82 EGDKGDEASEVTGP 95 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFNADKGFGFI+ +GS VFVHFSAIQ D +++L EGQ V F +E +GP Sbjct: 1 MEHGTVKWFNADKGFGFITRENGSD-VFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQ 59 Query: 64 AANVI 68 A NV Sbjct: 60 AVNVT 64 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 4/74 (5%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIES 57 + K+ G VKWFN G+GFI+ D ++D+FVH +AI N+N R+L + ++V F I Sbjct: 18 ATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVE 77 Query: 58 GAKGPAAANVIITD 71 G+KG AA+V D Sbjct: 78 GSKGLEAASVTGPD 91 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQN--DNYRTLFEGQKVTFSIESG 58 M+ + G VKWFN +KG+GFI +G KDVFVHF + +L EGQKVTF + G Sbjct: 1 MAELLDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEG 60 Query: 59 AKGPAAANVIIT 70 KGP A NV Sbjct: 61 QKGPQAENVTPL 72 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 2/69 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK--G 61 TG VKWFN +KGFGFI+P DG D FVH SA++ L EGQKV + + + + Sbjct: 48 MTTGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGK 107 Query: 62 PAAANVIIT 70 +A+N+ + Sbjct: 108 SSASNLTLV 116 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNY----RTLFEGQKVTFSIE 56 M ++ G+VKWFN G+GFI+ D S D+FVH SAI +N R+L EG++V F + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 SGAKGPAAANVIIT 70 G KG A+ V Sbjct: 82 EGDKGDEASEVTGP 95 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +M G VKWFN KG+GFIS + KDVFVH+S + + +++L EG +V F + GAKGP Sbjct: 19 EMKGTVKWFNNQKGYGFIS-DESGKDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 64 AANVIIT 70 A NV Sbjct: 78 ATNVTKL 84 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG-PA 63 ++G+ KWF++ KGFGFI+P DGS+D+FVH I+ + +R+L + ++V + IE+ KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 64 AANVIITD 71 A NV + Sbjct: 71 AVNVSGPN 78 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 MS + +G VKWFN +KGFGFI+P G D+FVHF AIQ + +++L EGQKVTF G K Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQK 59 Query: 61 GPAA 64 G A Sbjct: 60 GMQA 63 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFNA+KGFGFI G DVFVHFSAI + Y++L EGQ V F + G +GP Sbjct: 1 MKQGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQ 59 Query: 64 AANVIIT 70 AANV+ Sbjct: 60 AANVVKL 66 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 44/66 (66%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 G VKWF+ DKG+GFI+ D + DVFVHF+ IQ + ++TL +GQKV F + KGP A Sbjct: 3 FRGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRA 62 Query: 65 ANVIIT 70 NV + Sbjct: 63 KNVRVL 68 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 39/61 (63%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G KWFN KG+GF++P DG ++VFVH S IQ +R+L E ++V F + ++G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 67 V 67 V Sbjct: 101 V 101 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNY----RTLFEGQKVTFSIE 56 ++ ++ G+VKWFN G+GFI +D +DVF+H SAI +N R++ EG+ V F + Sbjct: 32 LATRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLV 91 Query: 57 SGAKGPAAANVIIT 70 +GAKG AANV Sbjct: 92 AGAKGTEAANVTGL 105 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 31/57 (54%), Positives = 35/57 (61%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 TG VKWFN KGFGFI P G DVFVH SA+Q TL EGQKV++ I + Sbjct: 42 MATGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN DKGFGFI +G +D+FVHF A+ + + L EGQKV + I G KGP Sbjct: 77 REVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQ 135 Query: 64 AANVIITD 71 A V+I D Sbjct: 136 AEQVVILD 143 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSA-IQNDNYRTLFEGQKVTFSIESGA 59 M+ + G+VKWF+A KG+GFI +G D+FVH+S I ++TL GQ V F + G Sbjct: 1 MAAR-RGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGP 59 Query: 60 KGPAAANVIITD 71 KG A NV+ D Sbjct: 60 KGLHARNVVPLD 71 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 89.3 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWF++ KG+GFI+ +G VFVH+SAI+ + ++TL EGQ V F I+ G KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGGD-VFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 65 ANVIITD 71 A+V + + Sbjct: 60 AHVKVVE 66 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 88.9 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 +TG VKWFN++KGFGFI DG+ VFVHFSAI D +++L EGQ+V+F +E G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGND-VFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 65 ANVIIT 70 NV+ Sbjct: 62 KNVVKL 67 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 88.9 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++NK+TG VKWFN G+GFI+ D +DVFVH SAI +N R++ +G+ V F + Sbjct: 20 IANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVV 79 Query: 57 SGAKGPAAANVIIT 70 G KG AANV Sbjct: 80 IGEKGHEAANVTGP 93 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 88.9 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M ++ G VKWFN +KG+GFI G KDVFVH SAI +TL EGQKV + GAK Sbjct: 1 MGTQVEGTVKWFNEEKGYGFIEQ-KGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAK 59 Query: 61 GPAAANVIIT 70 G A +V Sbjct: 60 GLQAEDVTPL 69 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 88.9 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWF+ KG+GFI DG VFVHFSAI+ + ++TL EGQ+V F+I G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGGD-VFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 65 ANVIIT 70 A+V+ Sbjct: 60 ADVVKL 65 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 88.9 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 5/74 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 ++ K+ G VKWFN G+GFI+ D +DVFVH +AI+ +N R++ +G+ F + Sbjct: 55 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVV 113 Query: 57 SGAKGPAAANVIIT 70 G KG AANV Sbjct: 114 EGGKGAEAANVTGP 127 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VK+FNA+KG+GFI+ G +D+FVH+SAI D Y+TL EGQ+V+F + G +G Sbjct: 1 MSTGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQ 59 Query: 64 AANVIIT 70 AANV Sbjct: 60 AANVRGI 66 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFNA+KG+GFI DG DVFVH+SAI+ D ++TL EGQKV F + KGP Sbjct: 1 MVRGKVKWFNAEKGYGFIEREDG-TDVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQ 59 Query: 64 AANVIITD 71 A+ V + Sbjct: 60 ASKVRKVN 67 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN KGFGFI+ DG +++FVHF +I + R L +GQ+V+F + KGP Sbjct: 80 REEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQ 138 Query: 64 AANVIIT 70 A NV Sbjct: 139 AENVEPL 145 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG- 61 ++ G VKWF+ KGFGFI+P DG D+FVH S+I+++ +R+L + V F +E G Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72 Query: 62 PAAANVIITD 71 P A V D Sbjct: 73 PKAIEVSGPD 82 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAI--QNDNYRTLFEGQKVTFSIESGAKGP 62 +TG VKWF+ +KG+GF++ D DVFVHFSAI ++TL +GQ+V F ++ +KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 63 AAANVIIT 70 A NV + Sbjct: 63 RAKNVRVL 70 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 48/64 (75%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWF+ +KG+GFI+ G DVFVHFSAIQ++ ++TL EGQ V F I GA+GP A Sbjct: 1 MVGKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 65 ANVI 68 ANVI Sbjct: 60 ANVI 63 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFN KGFGFI +G +DVFVH S I +++L EG KVTF IE G KGPA Sbjct: 1 MANGTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPA 59 Query: 64 AANVIIT 70 A NV + Sbjct: 60 ATNVTVV 66 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 45/70 (64%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S +M+G VKW++ KGFGF+S DG KDVFVH SA+ +L EGQ+VT + G KG Sbjct: 173 STEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKG 232 Query: 62 PAAANVIITD 71 A ++ + + Sbjct: 233 REAQSITVAE 242 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 35/64 (54%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN +KGFGF+ DGS D F+H A++ + L G ++T G KGP N+ Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 68 IITD 71 D Sbjct: 125 TSVD 128 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI G DVF HFSAI +D ++TL EGQ+V F++ G KGP A Sbjct: 5 TGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAE 63 Query: 66 NVI 68 N++ Sbjct: 64 NIV 66 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 +S ++ G V WF KG+GFIS D +DVFVH +AI N ++ +G+ V F + Sbjct: 64 ISKRVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVV 123 Query: 57 SGAKGPAAANVIIT 70 G G AANV Sbjct: 124 QGEWGTEAANVTGP 137 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 39/66 (59%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFN KG+GFI S D+F HFS++Q D Y+TL GQ VTF + KG Sbjct: 1 MPRGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVH 60 Query: 64 AANVII 69 A N++ Sbjct: 61 AINIVP 66 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 + K G+VKWFN KG+GFI +DVFVHFSAIQ+ Y+TL EG+ V F + G K Sbjct: 18 VPVKENGVVKWFNGAKGYGFIQR-STGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPK 76 Query: 61 GPAAANVI 68 G AANV+ Sbjct: 77 GLNAANVV 84 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA--KGP 62 TG VK+FNA KGFGFI+P +G KDVFVH SA++ R+L +GQKV+F +E KGP Sbjct: 3 QTGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGP 62 Query: 63 AAAN 66 A N Sbjct: 63 KAVN 66 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Query: 7 GLVKWFNADKGFGFISPVDGSK---DVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G KWFN+ +G+GFI+P S+ DVFVH S+I + +R+L EG +V F + KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 64 AANVIIT 70 A V+ Sbjct: 89 AVKVVGP 95 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKW++A KGFGF++ DG + VF+H SA+ TL GQ+V F I G KG Sbjct: 1 MPTGKVKWYDAGKGFGFLTKDDGGE-VFLHASALPP-GTTTLRPGQRVEFGIVEGRKGTQ 58 Query: 64 AANVIITD 71 A V + D Sbjct: 59 ALQVRLLD 66 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWFN +KG+GFIS +G VFVHFSAI + Y+TL EGQ V F + +G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENGDD-VFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 65 ANVI 68 NV Sbjct: 60 VNVR 63 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 + +G VKWFN KGFGFI P DG +DVFVH SA+ L EG +V + +E + Sbjct: 53 LRRMASGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRR 112 Query: 61 --GPAAANVIIT 70 AA ++++T Sbjct: 113 SGKLAATSIVVT 124 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK--GPA 63 +G+VKWFN KGFGFI P G +D+FVH SA++ L EGQ V F +E + + Sbjct: 183 SGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRRSGKTS 242 Query: 64 AANVIIT 70 A N+ IT Sbjct: 243 ATNLKIT 249 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 30/60 (50%), Positives = 39/60 (65%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VKWFN KG+GF++P DG KDVFVH SA++ Y +L EG KV + + + G AA Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 45/68 (66%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S +MTG VKW++ KGFGF+S DG KDVFVH SA+ +L EGQ+VT + G KG Sbjct: 212 SVEMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKG 271 Query: 62 PAAANVII 69 A+++ + Sbjct: 272 REASSITV 279 Score = 68.1 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 34/64 (53%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN +KGFGF+ DGS D F+H A++ + L G ++T G KGP V Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 Query: 68 IITD 71 D Sbjct: 141 NSVD 144 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFIS-PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 + K+ G+ +WFN DKGFGF+ S+D+F H + I+ + +R+L EG++V F++ G Sbjct: 9 CTEKIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGE 68 Query: 60 KGPAAANVI 68 KGP A ++ Sbjct: 69 KGPQAIEIV 77 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +S ++ G VK F+A GFGFI+P D +D+F+H S+++ D+YR+L + + S+ SG Sbjct: 2 VSERVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGND 61 Query: 61 GP-AAANVIIT 70 G A +V Sbjct: 62 GRNKAVDVTAL 72 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP- 62 + G VKWFN KG+GFI+P G KDVFVH SA+Q R+L EGQ++ F IE G Sbjct: 32 MLHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRA 91 Query: 63 AAANVIITD 71 AA N+ D Sbjct: 92 AAVNLTRAD 100 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 45/64 (70%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG V+WFNA++GFGF++P DGS D+FVH S I D +R L EGQ+V+F++ G A Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQAR 114 Query: 66 NVII 69 +V I Sbjct: 115 DVRI 118 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 38/64 (59%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VKWFN KG+GFI +D+F+H+S+I D Y+TL GQ V+F G +G Sbjct: 1 MHHGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLH 60 Query: 64 AANV 67 A ++ Sbjct: 61 AVDI 64 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 85.1 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 2/68 (2%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK-- 60 TG VKWFNA KGFGFI P DGS DVFVH SA++ R L +GQK+++ + K Sbjct: 1 MMATGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRKSG 60 Query: 61 GPAAANVI 68 +A N+ Sbjct: 61 KMSADNLQ 68 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 40/71 (56%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +S ++TG+VKWF+A KG+GFI P +G DV VH S ++ L EG VT K Sbjct: 34 VSFEITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPK 93 Query: 61 GPAAANVIITD 71 G A V+ D Sbjct: 94 GAQAIRVVDVD 104 Score = 63.1 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 34/62 (54%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +VKWFN +G+GF++ +G+ D+F+H ++ R L GQ++ G KG A + Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 Query: 68 II 69 Sbjct: 197 AP 198 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN-YRTLFEGQKVTFSIESGAKGP 62 G VKWFNA KGFGFIS D VFVH++AI+++ YR L E Q+V F I G KG Sbjct: 1 MTKGKVKWFNATKGFGFISTEDQGD-VFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGL 59 Query: 63 AAANVIIT 70 A NV Sbjct: 60 QACNVKKL 67 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 84.7 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQ-NDNYRTLFEGQKVTFSIESGAKGP 62 T VKWF+A KG+GFI D +DVFVH+S IQ +D+++TL Q V F + G KG Sbjct: 1 MRTSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGL 60 Query: 63 AAANVIITD 71 A V D Sbjct: 61 HALEVAPLD 69 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 84.7 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 37/69 (53%), Positives = 46/69 (66%), Gaps = 3/69 (4%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA--KG 61 G VKWFNA+KG+GFI GS+DVF HFSAIQ ++ L EG +V F IE G KG Sbjct: 1 MAVGKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKG 59 Query: 62 PAAANVIIT 70 P A N+++T Sbjct: 60 PQARNIVVT 68 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 84.3 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW++A KGFGF++ DG + VFVH SA+ + +L GQ+V F + G +G A Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALPS-GVTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 66 NVIITD 71 +V D Sbjct: 65 SVRTLD 70 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWFN KG+GFI DG +DVFVH+S I D YR L EG+ V + ++ G KG Sbjct: 1 MPTGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLF 59 Query: 64 AANVIITD 71 AA V D Sbjct: 60 AAQVKSRD 67 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 40/70 (57%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G VKW+N +KGFGFI+ G KDVFVH + + L EGQ+V + G KG Sbjct: 168 TEERVGTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKG 227 Query: 62 PAAANVIITD 71 P A + + D Sbjct: 228 PEARGIEVAD 237 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 36/64 (56%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN +KGFGF+ DGS DVF+H A++ ++ G K++ + G KG V Sbjct: 69 TVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVTEV 128 Query: 68 IITD 71 + D Sbjct: 129 LEVD 132 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP- 62 K G+V WFN KGFGF++ DG DVFVH S I + +R+L + + V F +E G Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGRY 102 Query: 63 AAANVIITD 71 A V D Sbjct: 103 KAVKVTGPD 111 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN-----YRTLFEGQKVTFSI 55 ++ + G VKW++ + +GFIS DG KD+FVH +AI RTL + ++V F + Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDL 121 Query: 56 ESGAKGPAAANVIITD 71 G GP AANV + Sbjct: 122 VEGKNGPEAANVTGPN 137 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 41/64 (64%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWF+ D+GFGFI P +G +++F H I + Y+TL Q+VT+ +E G G A Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 66 NVII 69 N+I Sbjct: 64 NIIP 67 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQ-NDNYRTLFEGQKVTFSIESGAKGP 62 TG VKWFN++KGFGFI G DVFVHF+AIQ N+ + L EGQKV F +E G KG Sbjct: 1 MKTGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGL 59 Query: 63 AAANVIIT 70 AANV+ Sbjct: 60 QAANVVKL 67 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA--KGP 62 TG VK+FN +KGFGFI P DG D+FVH SA+Q L + QKV++ E KGP Sbjct: 15 QTGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGP 74 Query: 63 AAANVIIT 70 A N+ IT Sbjct: 75 KAVNITIT 82 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VK+FN DKGFGFI+ DG VFVHFS IQ D ++TL EGQ V++ ++ ++G Sbjct: 25 MLNGTVKFFNVDKGFGFIAGQDGVD-VFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQ 83 Query: 64 AANVIIT 70 A NV+ Sbjct: 84 AINVVAI 90 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +S ++ G+VK F+A GF FI+P DGS+D+F+H S+++ D YR+L + + S+ S Sbjct: 2 VSERVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDD 61 Query: 61 GP-AAANVIIT 70 G A +V Sbjct: 62 GRTKAVDVTAP 72 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 4/66 (6%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 TG VK+FN KGFGFI D+FVH SA+ + + E KV FSIE G KG A Sbjct: 137 QTGTVKFFNETKGFGFIKSDSSGDDIFVHVSALIDQ----IHENDKVRFSIEHGRKGLNA 192 Query: 65 ANVIIT 70 N+ + Sbjct: 193 VNIKLL 198 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 39/63 (61%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 K +G VK+FNA KGFGFI DG D FVH SA++ +L EG +++F +E +G Sbjct: 233 EKSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGK 292 Query: 63 AAA 65 AA Sbjct: 293 YAA 295 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 39/61 (63%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG+VK+FN+ KGFGF+ DG +DVFVH SA++ L EGQ ++F++ +A Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSAT 196 Query: 66 N 66 N Sbjct: 197 N 197 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G +KWFNA KGFGFI+ DG++ VFVHF ++ + R + GQ+V + + +GP A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 66 NVIIT 70 +V Sbjct: 119 DVSPL 123 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 39/68 (57%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 ++ G VKWF DKGFGF++ DG KDVFVH S ++ +L G++V + KG Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGRE 191 Query: 64 AANVIITD 71 A + + D Sbjct: 192 ATWIQLLD 199 Score = 67.0 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN KGFGF++P DG+ D F+H S + L EG +V I G KGP + Sbjct: 46 TVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQV--I 103 Query: 68 IITD 71 + D Sbjct: 104 RLVD 107 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 3/68 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNY-RTLFEGQKVTFSIESGA 59 M+ + G VKWFN DKG+GFI P DGSKDVFVH + + + L EG++V++ +E Sbjct: 1 MAQR--GRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTP 58 Query: 60 KGPAAANV 67 KG +A NV Sbjct: 59 KGLSAMNV 66 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 32/55 (58%), Positives = 39/55 (70%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 +G VKWFN+ KGFGFI P DG+ DVFVH SA++ R+L EGQKVT+ I K Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 36/69 (52%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 G KWF+ K +GF++P DGS DVFVH I+ YR+L ++V + + KG Sbjct: 61 ELYRGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGR 120 Query: 63 AAANVIITD 71 A V D Sbjct: 121 EATTVTGVD 129 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA--KG 61 + +G VK+F DKGFGFI+P +G DVFVH SA++ TL GQ+++F E KG Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 62 PAAANVIITD 71 P A + + D Sbjct: 181 PKAVELRLED 190 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 5/76 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIE 56 +++ +G+VKWFN G+GF++ D +DVF+H +AI +N R++ +G+ V F + Sbjct: 22 LASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVV 81 Query: 57 SGAKG-PAAANVIITD 71 G KG P AANV + Sbjct: 82 EGEKGLPEAANVTGPN 97 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAI----QNDNYRTLFEGQKVTFSIESGAK 60 +TG VKWFN +G+GF+ D +D+F+H SAI + +++ EG+++ F I GAK Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 61 GPAAANVIITD 71 G AANV D Sbjct: 89 GNEAANVSAID 99 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 37/63 (58%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + +G VK+FNA KGFGFI DG D FVH SA++ L EG ++ F +E +G Sbjct: 83 ERASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGK 142 Query: 63 AAA 65 AA Sbjct: 143 YAA 145 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 81.6 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAI--QNDNYRTLFEGQKVTFSIESGAKG 61 G V+WF+A++GFGF++ DG+ D+FVH S I +D ++L EGQ V F I G +G Sbjct: 1 MPQGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRG 60 Query: 62 PAAANVIIT 70 P A V IT Sbjct: 61 PQARRVQIT 69 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 V W++A KGFGF++P G D FVH ++ L EG +V+FS+ G +GP A +V Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 68 IIT 70 + Sbjct: 223 RVV 225 Score = 71.6 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G+V ++A++GFGFI+P G D+FVH S ++ L+EG +V F + +GP A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREGQE--LYEGDRVRFQVRQSDRGPQAD 312 Query: 66 NV 67 V Sbjct: 313 RV 314 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 G V W+ KG+GF++P G ++F H SAI + EGQ+V F + G KGP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK-GPAA 64 TG VKWFN KG+GFI P +G KDVFVH SA++ R L EGQK+++ + + + G A Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGKDA 62 Query: 65 A 65 A Sbjct: 63 A 63 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWFN KGFGFIS DG KD F+HFS I ++T+ EG++V F IE G KGP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 65 ANVI 68 NV+ Sbjct: 60 TNVV 63 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 38/64 (59%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G+VKWFN KGFGFIS D+F H+S I+ D YR+L GQKV F + KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 67 VIIT 70 +I Sbjct: 64 IIPI 67 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 81.6 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIES--GA 59 + + G KWFN KG+GF+ +D+FVH S + +R+L EG++V++ I+ Sbjct: 50 TPRYFGSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNG 109 Query: 60 KGPAAANVII 69 KG A V Sbjct: 110 KGREAYAVSG 119 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 81.2 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 36/64 (56%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G V WF+A+KGFGFI+P D S VFV F AI+ YRTL G V + E GP A Sbjct: 53 HGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAV 112 Query: 66 NVII 69 V Sbjct: 113 AVRP 116 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 81.2 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 40/70 (57%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G VKWF+A +GFGFI+ DV VHFS +++ RTL EG ++ + + +G Sbjct: 31 AETVVGAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRG 90 Query: 62 PAAANVIITD 71 A ++ D Sbjct: 91 LQARRILAID 100 Score = 57.7 bits (139), Expect = 1e-07, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 32/61 (52%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 +VKWFN KG+GF+ ++D+F+H ++ L ++ I G KGP A + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 68 I 68 I Sbjct: 196 I 196 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 81.2 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA--KGPA 63 TG+VK+FN DKGFGFI P +G D+FVH SA+Q L E QKV+F E KGP Sbjct: 4 TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPK 63 Query: 64 AANVII 69 A N+ I Sbjct: 64 AVNLQI 69 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 36/70 (51%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S ++ G VKWF+ KG+GFI+ G +DV +H S ++ T EG VT KG Sbjct: 11 SREIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKG 70 Query: 62 PAAANVIITD 71 A +I + Sbjct: 71 LQATRIINLE 80 Score = 65.5 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 34/63 (53%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWF+ KG+GF++ + ++D+FVH ++ L GQ++ S G KG AA + Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 68 IIT 70 Sbjct: 168 EPP 170 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN-YRTLFEGQKVTFSIE-SGAKG 61 + G V F+ KGFGFI P DG +D+FVH SAI++D YR+L E V F++ S Sbjct: 13 RSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDNK 72 Query: 62 PAAANVIIT 70 A +V Sbjct: 73 YQAVDVTAP 81 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQND-NYRTLFEGQKVTFSIESGAKGPAAAN 66 VKWF+ KG+GFI DG +D+FVHFSAI ++ +++ L + +V F I+ KG A N Sbjct: 6 KVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQKGMQAKN 65 Query: 67 V 67 V Sbjct: 66 V 66 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG-PA 63 G KWF++ KGFGFI+ DG D+FVH + I+ +R L EG+ V F ++ G G Sbjct: 88 QRGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRK 146 Query: 64 AANVIITD 71 A +V + Sbjct: 147 AVSVTGPN 154 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 ++ G+ KWFN KG+GFI+ +G +DVFVH S I D +R+L E +KV + Sbjct: 2 TRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNRK 60 Query: 63 AAANVIITD 71 A +V + Sbjct: 61 KAIHVTGPN 69 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 8/73 (10%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVH--------FSAIQNDNYRTLFEGQKVTFSIESG 58 G KWFN KG+GFI+P +G DVFVH S + D +R+L G++V F I Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 59 AKGPAAANVIITD 71 +G A V+ + Sbjct: 71 PEGNEATAVVSAE 83 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND-NYRTLFEGQKVTFSIESGAKG 61 + TG V F+ KGFGFI P G KD+FVH SAI++D YRTL+E V F+I Sbjct: 12 ERSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDK 71 Query: 62 PAAANVIIT 70 A +V Sbjct: 72 YQAVDVTAP 80 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 7/72 (9%) Query: 6 TGLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 +G+ KWFN GFGFIS P+D + DVFVH S + + +R+L EG+ + FS + Sbjct: 5 SGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKS 64 Query: 59 AKGPAAANVIIT 70 +KG A V Sbjct: 65 SKGLEAVRVSGP 76 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 42/67 (62%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG+VK + ++G+G+I+P G +DVFVHF+ I ++ L +G+KV++ + G K P Sbjct: 1 MKTGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQ 60 Query: 64 AANVIIT 70 AA V Sbjct: 61 AAQVQPI 67 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 79.7 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP- 62 TG VKWFN+ KGFGFI+P DG KDVFVH SA++ + L + QK+ + ++SG G Sbjct: 16 MPTGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRS 75 Query: 63 AAANVIIT 70 +A ++ + Sbjct: 76 SAGDLRLL 83 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 79.3 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND---NYRTLFEGQKVTFSIESGAKGPA 63 G VKW+N KG+GFI D +DVFVH SAI ++L E + V F + G+KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 64 AANVIITD 71 A NV + Sbjct: 65 AMNVTGPN 72 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VKWFN +KGFGFI G +++FVHF A+QN R+L G KV F +G Sbjct: 10 QQRGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQ 68 Query: 64 AANVII 69 A NV I Sbjct: 69 ADNVYI 74 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 7/74 (9%) Query: 4 KMTGLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIE 56 + TG KWFN GFGFIS P+D DVFVH S + + +R+L EG+ V F+ + Sbjct: 29 RGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFK 88 Query: 57 SGAKGPAAANVIIT 70 +KG + V Sbjct: 89 KSSKGLESIRVTGP 102 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 2/69 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK--G 61 G+VKWFN KGFGFI P DG +DVFVH +A++ L EG +VT+ +E + Sbjct: 1 MANGVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRRSGK 60 Query: 62 PAAANVIIT 70 +A N+ +T Sbjct: 61 TSAGNLRVT 69 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 2/65 (3%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK--GPAAA 65 +VKWFN+ KGFGFI P +G D+FVH SA++ R L EGQ+V + +E + +A Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRRSGKTSAG 174 Query: 66 NVIIT 70 N+ I Sbjct: 175 NLRIL 179 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 43/69 (62%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G+VK+F+A+KGFGF++ G KDVFVH A++ +TL GQ+V + G KG Sbjct: 132 TETVEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKG 191 Query: 62 PAAANVIIT 70 P A V I Sbjct: 192 PQADTVAII 200 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 39/67 (58%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 ++ VKWFNA KGFGF++P DGS D F+H SA++ + EG + + +G +GP Sbjct: 49 VSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGPQV 108 Query: 65 ANVIITD 71 V D Sbjct: 109 VMVHEVD 115 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ KM G VKWFN +G+GFISP DG DV+V+ +AI N ++L EGQ V FS Sbjct: 1 MTLKM-GRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIH 59 Query: 61 GPAAANVI 68 GP+AA+VI Sbjct: 60 GPSAADVI 67 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VKWF+ +G+GF+ P +G DVF+H S + ++ L EG ++ F IE KG Sbjct: 1 METGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDE---DLEEGDRLEFEIEETEKGLN 57 Query: 64 AANVIIT 70 A N+ Sbjct: 58 AVNIEAL 64 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M++K+ G VKWFN KG GFI + DVFVH+ +I ++ ++TL +GQ V+F I Sbjct: 1 MTDKLKGTVKWFNDSKGVGFIQRDN-EADVFVHYKSIVSEGHKTLKKGQAVSFFITENDF 59 Query: 61 GPAAANVII 69 G A+ V + Sbjct: 60 GRQASEVAL 68 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGS-KDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 S K++G +KWF+ KG+GFI P D+ +H ++++ D ++T EG ++ + G + Sbjct: 23 SLKVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDR 82 Query: 61 GPAAANVIITD 71 G V+ D Sbjct: 83 GLQCFRVLSMD 93 >UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q475L4_RALEJ Length = 195 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ +++G +K +N DKGFGFI+P +G +D+FVH S G+ +TF + Sbjct: 8 MNTRISGTLKSWNKDKGFGFIAPSNGGRDIFVHISDYPRQGGMP-KIGESLTFLVTLNQD 66 Query: 61 GP-AAANVIIT 70 G A NV Sbjct: 67 GKNKAINVQRP 77 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G + F+ +G+GFI+P +G +DVF+H + + D R L G KV F +E G +G A+ Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 67 VII 69 V I Sbjct: 68 VRI 70 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G +KWFNA KGFGFI DG++ VFVH+ ++ R++ +GQ+V +S+ + +GP A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 66 NVIIT 70 V Sbjct: 134 GVKAV 138 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDN----YRTLFEGQKVTFSIESGA 59 G VK+F A KGFGFI P DG +DVFVH++ I++D ++ L+EG +V ++ S Sbjct: 1 MAQGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSG 60 Query: 60 KGPAAANVIIT 70 KG A +V+ Sbjct: 61 KGTQAKDVVKL 71 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND-NYRTLFEGQKVTFSIESGAKGP 62 G +K+F+ +GFGFI P+DGS+DVF+H + I + L EGQ + + E KG Sbjct: 1 MEKGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGL 60 Query: 63 AAANVIITD 71 +A N D Sbjct: 61 SALNAAPAD 69 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + G V WFN KGFGFI+ DG VFVH++ I D +++L G++V++++ P Sbjct: 1 MRREGKVTWFNDKKGFGFITGDDGLD-VFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAP 59 Query: 63 AAANVIITD 71 A +V + D Sbjct: 60 KAVDVHLAD 68 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 34/67 (50%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG V F+ KG+GFI+P G +DVF+H S + + L G +V F G +G Sbjct: 1 MKTGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTK 60 Query: 64 AANVIIT 70 A V + Sbjct: 61 AMTVNLL 67 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + TG V WF+ +K +GFI+ G +FVH A+ D R L EG++V+F + G K Sbjct: 1 MNERSTGTVAWFDPEKSYGFITTHAG-ASLFVHRRAL-GDGRRWLVEGEEVSFVVVRGMK 58 Query: 61 GPAAANVIIT 70 G A +V++T Sbjct: 59 GDEANDVLVT 68 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP- 62 TG VK+FNA+KG+GFI P DG+ D+F+H + D R +V + + G G Sbjct: 1 MQTGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGLA-DKLRYPCPRDRVEYEVGKGPDGRL 59 Query: 63 AAANVIITD 71 A V + D Sbjct: 60 RAERVALID 68 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 36/65 (55%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKWFN KGFGFI P +G DVFVH + ++ TL E KV + + AA Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 66 NVIIT 70 N+ + Sbjct: 69 NIQLL 73 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 35/66 (53%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG VK F++ GFGFI FV ++AI+ Y++L GQ+V + + G KG Sbjct: 1 MRTGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQ 60 Query: 64 AANVII 69 NV I Sbjct: 61 CINVYI 66 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 6/73 (8%) Query: 5 MTGLVKWFNADKGFGFISPVDG-SKDVFVHFSAIQNDN-----YRTLFEGQKVTFSIESG 58 + G VKW++ +GFI+ D DVFVH +AI RTL +G++V F I G Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 59 AKGPAAANVIITD 71 +GP AANV + Sbjct: 66 KQGPEAANVTGPN 78 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 38/69 (55%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ + G VKWFN K FGFI +G KDVFVH SA+ L EGQ V F +E Sbjct: 1 MTTNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNG 60 Query: 61 GPAAANVII 69 +A N+ I Sbjct: 61 KISAVNLRI 69 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 7/72 (9%) Query: 6 TGLVKWFNADKGFGFIS-------PVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 TG KWFN GFGFIS P+D DVFVH S + + +R+L EG+ V F+ + Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 59 AKGPAAANVIIT 70 +KG + V Sbjct: 117 SKGLESIRVTGP 128 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 34/65 (52%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G VKW++ KGFGFI+P G KD FVH +A+ L EGQ V G KG Sbjct: 135 EGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGLEVL 194 Query: 66 NVIIT 70 ++ + Sbjct: 195 SIRLV 199 Score = 50.0 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVI 68 V WFNA KGFGF+ +DG++ ++ ++ R + EG ++ +IE +G V Sbjct: 47 VMWFNAGKGFGFVKLLDGTE-AYLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQVTKVR 105 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQND--NYRTLFEGQKVTFSIESGAK 60 K G +WF+ DKG+GFI DG KD+FVH+S+IQ + +TL E KV F+++ G + Sbjct: 4 KKEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDR 62 Query: 61 GPAAANVIITD 71 G A +V++ + Sbjct: 63 GAQAVDVVVVN 73 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 7/72 (9%) Query: 6 TGLVKWFNADKGFGFISPV-------DGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG 58 +G+ KWFN GFGF+S D DVFVH S + + +R+L EG+ V F+ + Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 59 AKGPAAANVIIT 70 +KG + V Sbjct: 95 SKGLESLQVTGP 106 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G+V F+ +GFGFI S+DVFVH I+ +L GQKV F E KG +A Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQQ--SLSPGQKVEFDTEQTDKGLSA 58 Query: 65 ANVII 69 NVI Sbjct: 59 INVIP 63 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 75.9 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVD----GSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 ++TG VKWF+A KG+GFI P D KDV +H +++++ EG +T + Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 60 KGPAAANVIITD 71 KG A V+ D Sbjct: 86 KGWQVAEVVDLD 97 Score = 65.5 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 27/60 (45%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN KG+GF+ D+FVH ++ L G+ V G KG A + Sbjct: 137 KVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEI 196 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW+++DKGFGF+S +G +DV+V SA+ L GQ+V F I SG +GP A Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALP-AGVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 66 NVIITD 71 ++ + D Sbjct: 111 SLKLLD 116 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 4/68 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VK+FN KGFGFI D ++D+FVH S + ++ + E +V F +E G KG Sbjct: 1 MQEGKVKFFNNTKGFGFIKADDSNEDIFVHSSGLIDE----IREDDRVQFEVEQGKKGLN 56 Query: 64 AANVIITD 71 A NV + D Sbjct: 57 AVNVEVID 64 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 75.5 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + G VK+FN DKG+GFI DGS D FVH +A+Q TL + Q+V++ +E+G G Sbjct: 21 TLMAIGTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNG 80 Query: 62 P-AAANVI 68 +A N+ Sbjct: 81 KVSAINLQ 88 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TG VKW++A+KGFGF+S DG +DV+V SA+ L GQ+V F + +G +GP A Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALP-AGVEALKSGQRVEFGVAAGRRGPQAL 73 Query: 66 NVIITD 71 ++ + D Sbjct: 74 SLKLID 79 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 S + G VKWF+ +KG+GF+ G +D+FVH S ++ D +L +G +V + + +G Sbjct: 131 SQREQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGDA-SSLGQGVEVEYEVGRNERG 188 Query: 62 PAAANVIIT 70 P A V + Sbjct: 189 PNARRVRVL 197 >UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALH9_DESPS Length = 204 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP-AAA 65 G +K +N +KG+GFI+P +G DVF+H A + +R GQ +++ SG KG A Sbjct: 4 GTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHRP-EIGQVISYGTTSGDKGRLRAC 62 Query: 66 NVIITD 71 NV + Sbjct: 63 NVQYME 68 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 34/64 (53%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN KGFGF+S DG++D+FVH ++ L G+++ G KG A V Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 68 IITD 71 D Sbjct: 195 RPLD 198 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +++G +KWF+ KG+GF+ +G DV +H +A++ D + EG +V G KG Sbjct: 32 EISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQ 91 Query: 64 AANVIITD 71 VI D Sbjct: 92 VFRVISLD 99 >UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Betaproteobacteria RepID=Q127M7_POLSJ Length = 193 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 ++ + G +K +NA++G GFI G +++FVH SA D R G+ ++F +E Sbjct: 4 LTMRFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDG-RLPAVGEPLSFEVEPDRD 62 Query: 61 GPA-AANVI 68 G A + Sbjct: 63 GKKCAVRIH 71 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G+V F+ KG+GFI+P +G +DVFVH + + TL G +V F + G +G Sbjct: 1 MAQGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPGT-TLTSGTRVVFDVLDGGRGLK 59 Query: 64 AANVII 69 A +V + Sbjct: 60 AYDVSL 65 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 74.7 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 ++ G +K +N ++GFGFI PV G +D+FVH A + R GQ VTF +E G G Sbjct: 1 MRLDGKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPSGTGRP-TVGQAVTFEVELGPNGK 59 Query: 63 A-AANVIIT 70 A +V Sbjct: 60 KRARSVQYP 68 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 36/66 (54%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G V+ F+A+KG+G+I P G ++ VHFSAI L GQ V+F I +GP Sbjct: 1 MAEGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPE 60 Query: 64 AANVII 69 A V I Sbjct: 61 AERVQI 66 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + G VKWF+ KG+GFI+ +G + FVH S I +R L G++V++ +++ KG Sbjct: 10 ATVEHGTVKWFDPVKGYGFIAGDNGKET-FVHQSDILMRGFRHLETGERVSYRVKATEKG 68 Query: 62 PAAANVI 68 A +VI Sbjct: 69 DKAIDVI 75 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 43/68 (63%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +++G++KWF+A KG+GF+ P +G DV +H + ++ D Y+T +EG ++ AKG Sbjct: 68 EISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQ 127 Query: 64 AANVIITD 71 A ++ D Sbjct: 128 AFRIVSMD 135 Score = 64.3 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 34/63 (53%) Query: 9 VKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVI 68 VKWFN +GFGF++ +G+ D+FVH ++ L GQ V G+KG AA + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEIQ 224 Query: 69 ITD 71 + Sbjct: 225 PEN 227 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 74.7 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +TG V F+ +G+GFI+P DGS DVFVH + + D + L G V + +GP Sbjct: 7 MLTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERGPK 65 Query: 64 AANVII 69 A V + Sbjct: 66 AVLVRV 71 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +TG V F+ +G+GFI+P G DVFVH + + D + L G V + +GP Sbjct: 1 MLTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPK 59 Query: 64 AANVIIT 70 A V + Sbjct: 60 ALTVRVL 66 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 7/71 (9%) Query: 7 GLVKWFNADKGFGFISPV-------DGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 G+ KWFN GFGF+S D DVFVH S + + +R+L EG+ V F+ + A Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 60 KGPAAANVIIT 70 KG + V Sbjct: 102 KGLESIRVTGP 112 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 11/73 (15%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAI----QNDNYRTLFEGQKVTFSIES 57 + ++TG VKWFN GFGFI+ D +D+FVH S+I + R++ EG+ V F Sbjct: 49 NKRITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEF---- 104 Query: 58 GAKGPAAANVIIT 70 G A V Sbjct: 105 ---GVIATKVTGP 114 >UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607Y7_METCA Length = 305 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 +++G V F +KGFGFI+P +G + F H S + + G +++F+ KG A Sbjct: 236 EISGTVLSFFHEKGFGFITPDNGGDNFFFHVSDLTGIEASDVCAGLRISFNAGRNDKGLA 295 Query: 64 AANVIIT 70 A N+ Sbjct: 296 AHNIRKL 302 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 9/78 (11%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRT------LFEGQKVTFSI 55 S + G VKWFN KGFG+I+P DG DVFVH SA++ + +R +G V F + Sbjct: 8 SARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDV 67 Query: 56 E---SGAKGPAAANVIIT 70 E + A V Sbjct: 68 EHESPTDERLKAVCVTGI 85 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M+ K G VKWF+ G+GFISP DG D++VH +AI N ++L GQ V FS Sbjct: 1 MTLK-KGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFH 59 Query: 61 GPAAANVI 68 GP+A +VI Sbjct: 60 GPSAEDVI 67 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG 61 + + G++ W++ +KG+GFI P G DVFVH S+++++ + L G + + G Sbjct: 107 NKRARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAG 166 Query: 62 -PAAANVIIT 70 A NV Sbjct: 167 KLQAINVTAP 176 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 11/73 (15%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNY----RTLFEGQKVTFSIES 57 S ++TG VKWFNA GFGFI+ D +D+FVH S I N +++ +G+ V F Sbjct: 31 SKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEF---- 86 Query: 58 GAKGPAAANVIIT 70 G A+ V Sbjct: 87 ---GLIASKVTGP 96 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLF---EGQKVTFSIES 57 M M G VKWFN +KG+GFI D + FVH+ +I ++ R L + + VTF + Sbjct: 1 MRFNMKGKVKWFNKNKGYGFIITDDNKE-YFVHWKSIVTNSPRELKVLEQDELVTFDLME 59 Query: 58 GAKGPAAANVIITD 71 KG A N+I + Sbjct: 60 TDKGIQAINIIRVN 73 >UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=Desulfovibrio vulgaris RepID=A1VD07_DESVV Length = 201 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIES-GAKGPAA 64 G + +N ++GFGFISP DGS VFVH SA ++ + G++V + + KGP A Sbjct: 27 QGKIAQWNDERGFGFISPDDGSPRVFVHISAFRSRHPLP-EVGERVLYYLGPLSPKGPRA 85 Query: 65 ANVIITD 71 + V D Sbjct: 86 SVVRYID 92 >UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Proteobacteria RepID=C7LWH7_DESBD Length = 168 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIES-GAKG 61 + G + + D+GFGFI+P G VFVH SA+Q R G+ VT+ + + G KG Sbjct: 1 MRFHGEISEWRDDRGFGFITPTGGGTRVFVHISALQKG--RRPRAGEMVTYEVGNSGDKG 58 Query: 62 PAAANVIITD 71 P A NV + Sbjct: 59 PRALNVNFVN 68 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 38/70 (54%), Gaps = 3/70 (4%) Query: 2 SNKMTGLVKWFNADKGFGFISPVDGSK-DVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 S G V WF+A KGFGFI P +G + VFV FS+I+ YRTL EGQ V F +G Sbjct: 12 STWYHGTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRFVRSAGR- 70 Query: 61 GPAAANVIIT 70 A V Sbjct: 71 -AEAVAVRPL 79 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 TGLVKWF+ KGFGF+ +G D+ +H + ++N ++ +G ++ + +G A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 66 NVIIT 70 V Sbjct: 72 QVHAI 76 Score = 63.5 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWF+ KGFGF + S D+F+H ++ L G+ + + G +G AA V Sbjct: 107 RVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 Query: 68 IITD 71 + Sbjct: 167 HAWE 170 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 + G VK F+ KG+GFI+ + +FVH+S I+ R L ++V+ I G KGP Sbjct: 1 MLKGKVKSFDEQKGWGFITVPHEGE-IFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 64 AANVIIT 70 AA+V + Sbjct: 60 AAHVRVL 66 >UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=Streptomyces RepID=D1XSW6_9ACTO Length = 143 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G V F+ +G+GFI+P G +DVF+H + + + G V F IE G +G Sbjct: 1 MAAGRVIRFDGMRGYGFIAPEHGGEDVFMHVNDLLIPE-SAVRAGLMVEFEIEDGDRGLK 59 Query: 64 AANVII 69 A+ V + Sbjct: 60 ASEVRL 65 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 TG+VK+FN KG+GFI D ++D+FVH + + T+ E +V F + G KG Sbjct: 1 MQTGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNGI---TIREKDRVQFEVVDGKKGLN 57 Query: 64 AANVIITD 71 A V D Sbjct: 58 AVKVKKID 65 >UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Acidovorax RepID=A1TSW1_ACIAC Length = 224 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + G++ +N +GFGFI P+ G VFVH A Q R GQ+V F++E+G G Sbjct: 1 MQFDGVIASWNDARGFGFIEPLQGGDPVFVHIKAFQGGAPRP-QAGQRVRFAVEAGPGGR 59 Query: 63 A-AANVIIT 70 A V Sbjct: 60 KRACRVESL 68 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 G+VK+FN KGFGFI+ KD FVH S + ++ + EG +V F ++ G KG A Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGLIDE----VREGDEVEFELKEGNKGLNAV 58 Query: 66 NVIIT 70 NV + Sbjct: 59 NVRVL 63 >UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ART0_BURM1 Length = 193 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 M G VKWF+ DKG GFI + D F H S + EG V F S +GP A Sbjct: 1 MRGTVKWFSKDKGHGFIYGES-AVDYFFHVSDVV--GADAPREGDIVEFDATSNKRGPRA 57 Query: 65 ANVIITD 71 A V I + Sbjct: 58 ATVRIVE 64 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 7/74 (9%) Query: 4 KMTGLVKWFNADKGFGFISPVDGS----KDVFVHFSAIQNDN-YRTLFEGQKVTFSIESG 58 K+ G VKWF++ KG+GF++P + +++FVH ++IQ++ YRTL E ++ F +E Sbjct: 3 KVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVEKE 62 Query: 59 AK--GPAAANVIIT 70 A+ A NV Sbjct: 63 AESGKFKAINVTAP 76 >UniRef50_Q12K82 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12K82_SHEDO Length = 196 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG- 61 ++ G + ++ DKGFGFI P +VF+H SA++N + R E +T+++ + +G Sbjct: 1 MRVKGKLVRWDDDKGFGFIRPNLTGPEVFLHISALRNASRRP-QEDDVITYALVADKQGR 59 Query: 62 PAAANVIIT 70 P AAN +T Sbjct: 60 PTAANATLT 68 >UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=Bacteria RepID=A4VQF2_PSEU5 Length = 235 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP-AA 64 G +K +N DKGFGFI P G +++FVH SA+ + R L G +V F A+G A Sbjct: 4 RGTLKSWNDDKGFGFIRPEQGGEELFVHISAVHGE-RRPLVGG-RVLFVAGRDAQGRLRA 61 Query: 65 ANVII 69 +V + Sbjct: 62 EHVRL 66 >UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4M3_AZOSE Length = 189 Score = 72.4 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESG-AKG 61 ++ G + +N D+GFGFI P DG +VFVH SA D R G+ ++F IE + Sbjct: 1 MRIEGTLGKWNDDRGFGFIVPKDGGPEVFVHVSAFPRDGRRP-QIGEPLSFEIELDKDRK 59 Query: 62 PAAANV 67 A V Sbjct: 60 KRAVGV 65 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 ++G V ++ ++GFGF++P G DVF+H + I D +L G KV+F +E +G A Sbjct: 7 VSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDE-SSLKPGAKVSFDVEETDRGAKA 65 Query: 65 ANVIITD 71 NV +T+ Sbjct: 66 VNVAVTE 72 >UniRef50_A6C742 Cold-shock DNA-binding domain n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C742_9PLAN Length = 195 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + G + ++ +KGFGFIS + VFVH SA R G V++ G Sbjct: 1 MRSQGKITDWDDEKGFGFISSQNDDSSVFVHISAFSGSARRP-QAGDPVSYETAHEENGK 59 Query: 63 -AAANVIITD 71 A NV +D Sbjct: 60 VRAENVRFSD 69 >UniRef50_UPI0001AEC17A integral membrane protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC17A Length = 165 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 K G ++ ++ KG+GF+ P G F H A + + R + G + + +E G Sbjct: 1 MKYQGRIQQWDDAKGYGFVEPNGGGTRAFTHIKAFKQRSRRPVN-GDIIVYEVEQDRNGN 59 Query: 63 -AAANVIIT 70 A N+ + Sbjct: 60 HRACNISLL 68 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 71.6 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%) Query: 4 KMTGLVKWFNADKGFGFISPVDGS----KDVFVHFSAIQNDNYRTLFEGQKVTFSIESGA 59 +++G VKWF+ KG+GFI P D KDV +H ++++N T EG + + Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 60 KGPAAANVIITD 71 KG + V+ D Sbjct: 77 KGWQVSEVVDLD 88 Score = 65.1 bits (158), Expect = 7e-10, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 26/61 (42%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWFN KG+GF+ D+FVH ++ L G V G KG A + Sbjct: 137 KVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVAEI 196 Query: 68 I 68 Sbjct: 197 T 197 >UniRef50_A6W4V4 Putative cold-shock DNA-binding domain protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W4V4_KINRD Length = 156 Score = 71.6 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M++ G V+ F+ +GFGFI+ D ++VF H + + L EG V F+++ G + Sbjct: 1 MASLAKGKVRSFDDGRGFGFITSPDCPENVFFHVKDVVDLEAEDL-EGASVQFTLDQGDR 59 Query: 61 GPAAANVIIT 70 G A +V Sbjct: 60 GYKATDVRPL 69 >UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Salinispora RepID=A8M1B3_SALAI Length = 138 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G + F+ +G+GFI+P G DVFVH + D + G +V++ + +G Sbjct: 1 MEKGTIVRFDDVRGYGFIAPFGGGDDVFVHANDF-GDQRHAVAAGMRVSYEVVQSERGLK 59 Query: 64 AANVII 69 A+V++ Sbjct: 60 VASVVL 65 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 G VK F+++ +GFI FV + +I+ + Y+ L GQ+V + + G KG Sbjct: 1 MRKGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQ 60 Query: 64 AANVII 69 NV + Sbjct: 61 CINVYV 66 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 37/64 (57%) Query: 4 KMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPA 63 K+ G+VKWF+ KGFGF++ DG D+ +H + ++N ++ EG V I+ +G Sbjct: 10 KIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQ 69 Query: 64 AANV 67 A V Sbjct: 70 AVEV 73 Score = 62.4 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 31/60 (51%) Query: 8 LVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANV 67 VKWF+ KGFGF + DVF+H +++ + L G+ + + G +G AA + Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 >UniRef50_A4SJX6 Cold-shock protein, DNA-binding n=2 Tax=Aeromonas RepID=A4SJX6_AERS4 Length = 219 Score = 71.2 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Query: 3 NKMTGLVKWFNADKGFGFISP-----VDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIES 57 + G + +N +GFGFI+P ++FVH SA+Q+D G++V++ + + Sbjct: 1 MRYQGRIASWNEARGFGFITPEQEGGEQQGSELFVHISALQSDG-SLPNVGERVSYQLGT 59 Query: 58 G-AKGPAAANVIITD 71 G P A V D Sbjct: 60 GKDDKPRAVQVFFPD 74 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 71.2 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 37/71 (52%) Query: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 M ++ T VKWFNA KGFGF+ DG D F+H S +Q Y L EG + + G K Sbjct: 1 MLSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQK 60 Query: 61 GPAAANVIITD 71 G + + + Sbjct: 61 GMQVSEIYEVE 71 Score = 67.0 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 40/62 (64%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 ++ G+VK+F+ADKGFGF+ P G KDV+V +Q+ L +GQ+V SI G KGP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 63 AA 64 A Sbjct: 203 MA 204 >UniRef50_C0QJI8 CspG n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJI8_DESAH Length = 217 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKG-PAA 64 G + +N +KGFGFI+P G K +F H + N R Q +T+S+ +G P A Sbjct: 4 RGNITLWNDEKGFGFITPNAGGKQLFFHIKSCSPHNRRPAI-NQSITYSLSVDKQGRPCA 62 Query: 65 ANVIITD 71 VI+ D Sbjct: 63 VKVILPD 69 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 71.2 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 K++G VK + +DKGFGFI G DVFVHFSAIQ R L GQ+V + G +GP Sbjct: 2 EKISGYVKTWQSDKGFGFIEL-KGEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRGP 60 Query: 63 AAANVIITD 71 AA V + D Sbjct: 61 QAAAVEVLD 69 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 32/43 (74%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTL 45 + G VKWF+ KGFGFI+P DG D+FVH S+I+++ +R+L Sbjct: 9 ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XTJ6_CAEEL Length = 294 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Query: 1 MSNKMTGLVKWFNADKGFGFISPV---DGSKDVFVHFSAIQNDN-----YRTLFEGQKVT 52 + + G VKWF+ +GF++ D ++D FVH +AI + RTL + + V Sbjct: 85 IETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVV 144 Query: 53 FSIESGAKGPAAANVIITD 71 F I G KGP AANV D Sbjct: 145 FDIVEGLKGPEAANVTGPD 163 >UniRef50_Q7WXG5 Putative uncharacterized protein n=2 Tax=Cupriavidus RepID=Q7WXG5_RALEH Length = 191 Score = 70.5 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 K G VK ++ADKGFGFI KDVF H +A+Q T G +V+F + G G Sbjct: 1 MKKAGQVKTWHADKGFGFIDVYADMKDVFFHVTALQTRAV-TPTPGDRVSFELGKGKDGR 59 Query: 63 -AAANVIIT 70 A NV I Sbjct: 60 IQALNVAIV 68 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 70.5 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 5 MTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAA 64 + G+V WFN KGFGFI + +D++VH+S + D ++TL G+KV F + P A Sbjct: 3 LKGVVSWFNDIKGFGFIV-DEAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 65 ANVIITD 71 V I + Sbjct: 62 TAVRIIN 68 >UniRef50_Q84IJ3 Cold shock protein n=1 Tax=Janthinobacterium sp. J3 RepID=Q84IJ3_9BURK Length = 174 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 ++ G V +N ++GFGFI S+ F+H SA++ R L G VT+ I KG Sbjct: 1 MRLQGRVIEWNDERGFGFIIQNGTSERTFLHISALRKTKGRPLL-GSLVTYEIRRDDKGR 59 Query: 63 -AAANVIIT 70 A + Sbjct: 60 LQAVAAELI 68 >UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A3J0H8_9FLAO Length = 148 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G + +FN KGFGFI V+ + FVH S + +D + EG VT+ +E GAKG A N Sbjct: 89 GTIDFFNDSKGFGFIKAVETGEKYFVHISGLLDD----VKEGNLVTYDLEKGAKGMNAVN 144 Query: 67 VIIT 70 V Sbjct: 145 VKKI 148 >UniRef50_C0WQD2 Possible cold-shock protein n=3 Tax=Lactobacillus RepID=C0WQD2_LACBU Length = 93 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 + G VK +NA GFGFI+ G ++F +A ++Y + G +V++ + G KGP Sbjct: 22 KMLYGKVKTYNAKNGFGFITQDQG-DNLFFFKNAFHGEDYSRIVPGIRVSYVVVEGQKGP 80 Query: 63 AAANVIITD 71 AA I + Sbjct: 81 QAAKAQIVE 89 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 G VK+FN KGFGFI + K+ FVH S + ++ + E +VTF +E G KG A N Sbjct: 4 GTVKFFNNSKGFGFIIEKESGKEYFVHVSGLVDE----IRENDEVTFELEKGKKGLNAVN 59 Query: 67 VIIT 70 V + Sbjct: 60 VKLV 63 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.177 0.591 Lambda K H 0.267 0.0538 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 599,234,053 Number of Sequences: 3077464 Number of extensions: 25727937 Number of successful extensions: 55613 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1119 Number of HSP's successfully gapped in prelim test: 292 Number of HSP's that attempted gapping in prelim test: 53414 Number of HSP's gapped (non-prelim): 1713 length of query: 71 length of database: 1,040,396,356 effective HSP length: 43 effective length of query: 28 effective length of database: 908,065,404 effective search space: 25425831312 effective search space used: 25425831312 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 88 (38.1 bits)