95 d1v04a_ Probab=99.52   E-value=5.3e-11  Score=85.52  Aligned_columns=204  Identities=19%

Q ss_pred             ECCCCCEEEEECCCCCEEEEEE---CCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCEEEE
Q ss_conf             0588713999979999899997---8998199999218986136643100000000012146640478851478508999
Q batch____        33 DVPGQVQPMVVSPDKRYLYVGV---RPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVT  109 (331)
Q Consensus        33 ~~~~~v~~ia~spdG~~L~vs~---~~d~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  109 (331)
                      +....|.+|+|+|||+.+++++   ..++.+.+|+++.........  ......+....+.|++..++..+.....+.++
T Consensus        32 g~~~Gpedia~~pdG~~~~~~~~~~~~~G~i~~~d~~~~~~~~~~l--~~~~~~p~~~~f~P~G~~l~~~~~~~~~l~vv  109 (332)
T d1v04a_          32 GIDNGSEDLEILPNGLAFISSGLKYDKSGKILLMDLNEKEPAVSEL--EIIGNTLDISSFNPHGISTFIDDDNTVYLLVV  109 (332)
T ss_dssp             TCCSCCCEEEECTTSEEEEEECCCCCCCCEEEEEETTSSSCCEEEC--EEECSSSCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred             CCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEE--EECCCCCCCEEECCCCCEEEEECCCCEEEEEE
T ss_conf             7778752679989987999963777667639999527888614896--30477632004538863899707884389999


Q ss_pred             EECCCCCCEEEEECCCCCCCEEEEEEECCCCEEECCCCCEEEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECCEE
Q ss_conf             62133320001210355530046663014511205764035899966876112321554211563033210123201102
Q batch____       110 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY  189 (331)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (331)
                      ...                                                                             
T Consensus       110 ~~~-----------------------------------------------------------------------------  112 (332)
T d1v04a_         110 NHP-----------------------------------------------------------------------------  112 (332)
T ss_dssp             ECS-----------------------------------------------------------------------------
T ss_pred             ECC-----------------------------------------------------------------------------
T ss_conf             648-----------------------------------------------------------------------------


Q ss_pred             EEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEE--------------CCCCEEEEE
Q ss_conf             467750455302443147860689964035434443166643599995465510120--------------478516888
Q batch____       190 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYAC--------------DRTASLITV  255 (331)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------~~~~~~~~~  255 (331)
                           .......++.++.....+.............     ++.++++++++..+..              ........+
T Consensus       113 -----~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~-----pn~i~~~~dg~~~~t~~~~~~~~~~~~~~~~~~~~~g~v  182 (332)
T d1v04a_         113 -----GSSSTVEVFKFQEEEKSLLHLKTIRHKLLPS-----VNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFV  182 (332)
T ss_dssp             -----TTCCEEEEEEEETTTTEEEEEEEECCTTCSS-----EEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEE
T ss_pred             -----CCCCEEEEEEEECCCCEEEEEEEECCCCCCC-----CEEEEEECCCCEEEECCCCCCCCCCCEEEEECCCCCEEE
T ss_conf             -----9887599999938997699975104665353-----105899059959996277741565412663326871129


Q ss_pred             EEECCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEC
Q ss_conf             752389717999875167883159999999998999937998199999718997579989951688975999976
Q batch____       256 FSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNA  330 (331)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~ia~spDG~~l~va~~~~~~v~v~~~d~~tg~l~~~~~~~vg~~P~~i~v~~  330 (331)
                      +..+.........+.    ..|++|+++|||++|||+...+++|++|+++.. +.++.+..++++..|..|.+.+
T Consensus       183 ~~~~~~~~~~~~~~~----~~pnGIa~spdg~~l~Va~~~~~~I~~~~~~~~-~~l~~~~~~~~~~~pDni~~d~  252 (332)
T d1v04a_         183 TYYSPNDVRVVAEGF----DFANGINISPDGKYVYIAELLAHKIHVYEKHAN-WTLTPLRVLSFDTLVDNISVDP  252 (332)
T ss_dssp             EEECSSCEEEEEEEE----SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT-SCEEEEEEEECSSEEEEEEECT
T ss_pred             EEECCCCEEEECCCC----CCCCEEEECCCCCEEEEEECCCCEEEEEEECCC-CCCEEEEEEECCCCCCEEEECC
T ss_conf             998798028804786----553067998889989999158996999996699-8703569840575654038768