Phyre 2 alignment of P24200 with c3jyw9_

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Job Description | P24200
Confidence | 10.87% | Date | Thu Jan 5 11:41:10 GMT 2012
Rank | 68 | Aligned Residues | 28
% Identity | 29% | Template | c3jyw9_
PDB info | PDB header:ribosome | Chain: 9: PDB Molecule:60s ribosomal protein l43; | PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
Resolution | 8.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 196 | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | K | A | W | I | L | Q | Q | S | K | G | I | C | E | N | C | G | K | N | A | P | F | Y | L | N | D | G | N | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | L | E | I | Q | Q | H | A | R | Y | D | C | S | F | C | G | K | K | T | V | K | R | G | A | A | G | I | W
Template Known Secondary structure |  |  |  |  |  |  |  |  | S |  | B |  |  | S | S |  |  | S | S |  | B | S | B |  | S | S | S |  | B
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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