Phyre 2 alignment of P24200 with c2wy3B_

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Job Description | P24200
Confidence | 21.04% | Date | Thu Jan 5 11:41:10 GMT 2012
Rank | 29 | Aligned Residues | 27
% Identity | 48% | Template | c2wy3B_
PDB info | PDB header:immune system/viral protein | Chain: B: PDB Molecule:uncharacterized protein ul16; | PDBTitle: structure of the hcmv ul16-micb complex elucidates select2 binding of a viral immunoevasin to diverse nkg2d ligands
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | H | P | G | E | Y | F | T | L | I | G | N | S | P | R | D | I | R | L | K | M | C | G | Y | Q | A | Y | F | S | R | T | G | R | K | E | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | H | P | G | E | T | W | T | L | H | G | . | . | . | . | . | . | . | . | . | M | C | I | S | I | C | Y | Y | E | N | V | T | E | D | E | I
Template Known Secondary structure |  | S |  |  | S | S |  |  |  |  |  | S | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | S |  |  | T | T |  | B
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 48 | . | 50 | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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