Phyre 2 alignment of P24200 with d1xbta2

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Job Description | P24200
Confidence | 50.75% | Date | Thu Jan 5 11:41:10 GMT 2012
Rank | 12 | Aligned Residues | 38
% Identity | 29% | Template | d1xbta2
SCOP info | Glucocorticoid receptor-like (DNA-binding domain) | Glucocorticoid receptor-like (DNA-binding domain) | Type II thymidine kinase zinc finger
Resolution | 2.40

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 206 | . | . | . | 210 | . | . | . | . | . | . |  |  | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | C | E | N | C | G | K | N | A | P | F | . | . | Y | L | N | D | G | N | P | Y | L | E | V | H | H | V | I | P | L | S | S | G | G | A | D | T | T | D | N | C | V | A | L | C | P | N | C | H | R | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Template Sequence |  | V | C | M | E | C | F | R | E | A | A | Y | T | K | R | L | G | T | E | K | E | V | E | V | I | . | . | . | . | . | . | . | . | G | G | A | D | K | Y | H | . | . | . | S | V | C | R | L | C | Y | F | K
Template Known Secondary structure |  | B |  | T | T | T |  | S | B |  |  |  |  |  |  |  | S |  |  |  | S | S |  |  |  | . | . | . | . | . | . | . | . |  | S | T | T | T |  |  | . | . | . |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |  |  |  |  |  |  |  |  | . | . | . | . | 180 | . | . |  |  |  | . | . | . | . | . | . | . | 190 | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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