BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (371 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AAP2 Protein adrA n=103 Tax=Enterobacteriaceae RepID=... 761 0.0 UniRef50_C1M7K1 Diguanylate cyclase AdrA n=9 Tax=Gammaproteobact... 557 e-157 UniRef50_C6DCM6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae R... 351 3e-95 UniRef50_A8GB07 Diguanylate cyclase n=7 Tax=Enterobacteriaceae R... 339 8e-92 UniRef50_C6CCW8 Diguanylate cyclase n=3 Tax=Enterobacteriaceae R... 331 3e-89 UniRef50_C4UJR8 Diguanylate cyclase n=4 Tax=Enterobacteriaceae R... 313 7e-84 UniRef50_B1J1G5 Diguanylate cyclase n=17 Tax=Pseudomonas RepID=B... 261 2e-68 UniRef50_B2JNN3 Diguanylate cyclase n=1 Tax=Burkholderia phymatu... 231 3e-59 UniRef50_B3PC25 YaiC/YhcK/ArdA family protein n=1 Tax=Cellvibrio... 224 4e-57 UniRef50_A4WAF6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae R... 210 6e-53 UniRef50_C6CCY7 Diguanylate cyclase n=2 Tax=Enterobacteriaceae R... 206 1e-51 UniRef50_C7HYH7 Diguanylate cyclase n=1 Tax=Thiomonas intermedia... 194 4e-48 UniRef50_C5T000 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 177 5e-43 UniRef50_A9C166 Diguanylate cyclase n=3 Tax=Comamonadaceae RepID... 173 7e-42 UniRef50_Q6FA46 Putative uncharacterized protein n=1 Tax=Acineto... 171 5e-41 UniRef50_B5RJW5 MASE2 domain/diguanylate cyclase n=2 Tax=Klebsie... 167 4e-40 UniRef50_UPI0001AF38B9 GGDEF domain-containing protein n=1 Tax=P... 166 2e-39 UniRef50_A4BIU7 Response regulator containing a CheY-like receiv... 153 1e-35 UniRef50_Q2BP76 GGDEF domain protein n=1 Tax=Neptuniibacter caes... 146 1e-33 UniRef50_B8K6R1 Sensor protein n=8 Tax=Vibrionaceae RepID=B8K6R1... 140 8e-32 UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammapr... 139 1e-31 UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 138 3e-31 UniRef50_B8GR45 Diguanylate cyclase with PAS/PAC sensor n=27 Tax... 138 3e-31 UniRef50_B4SNB1 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 137 4e-31 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 136 1e-30 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 135 3e-30 UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrery... 134 4e-30 UniRef50_Q2BML0 Putative diguanylate cyclase (GGDEF domain) n=1 ... 134 6e-30 UniRef50_Q5DZD0 GGDEF domain protein n=16 Tax=Vibrionaceae RepID... 134 7e-30 UniRef50_Q1K364 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 132 2e-29 UniRef50_Q39SX4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Geoba... 132 2e-29 UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Nep... 132 2e-29 UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepI... 132 3e-29 UniRef50_Q21V79 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 132 3e-29 UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 131 3e-29 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 131 5e-29 UniRef50_B0SIV5 GGDEF domain receiver component of a two-compone... 130 7e-29 UniRef50_B8FCK6 Response regulator receiver modulated diguanylat... 130 7e-29 UniRef50_Q2SHG3 Response regulator containing a CheY-like receiv... 130 9e-29 UniRef50_Q0VQ38 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q... 130 1e-28 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 129 1e-28 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 129 1e-28 UniRef50_Q1IV91 Diguanylate cyclase n=1 Tax=Candidatus Koribacte... 129 2e-28 UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 128 3e-28 UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii ... 128 3e-28 UniRef50_A6Q482 Putative uncharacterized protein n=1 Tax=Nitrati... 128 3e-28 UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 128 4e-28 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 128 4e-28 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 128 4e-28 UniRef50_Q2VZ27 Response regulator containing a CheY-like receiv... 127 6e-28 UniRef50_A6FD11 Sensory box/GGDEF family protein n=1 Tax=Moritel... 127 6e-28 UniRef50_D0I9J2 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 127 6e-28 UniRef50_B6BJ77 Signal transduction response regulator-chey like... 127 6e-28 UniRef50_Q1NDY2 Putative diguanylate cyclase (GGDEF domain) with... 127 7e-28 UniRef50_Q21HV6 Response regulator receiver modulated diguanylat... 127 7e-28 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 127 8e-28 UniRef50_Q1ZGI0 Sensory box/GGDEF family protein n=1 Tax=Psychro... 127 9e-28 UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnic... 126 1e-27 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 126 1e-27 UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 126 1e-27 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 126 1e-27 UniRef50_Q2SPL7 Response regulator containing a CheY-like receiv... 126 2e-27 UniRef50_A0L7Q0 Response regulator receiver modulated diguanylat... 125 2e-27 UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwell... 125 2e-27 UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio... 125 2e-27 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 125 2e-27 UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-... 125 3e-27 UniRef50_B4U722 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp.... 125 3e-27 UniRef50_B9QXS2 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 125 3e-27 UniRef50_Q1D1X1 FHA/GGDEF domain protein n=2 Tax=Cystobacterinea... 125 3e-27 UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clos... 125 3e-27 UniRef50_A3UJW0 Stalked-cell differentiation controlling protein... 124 4e-27 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 124 4e-27 UniRef50_Q2W2W5 Response regulator containing a CheY-like receiv... 124 4e-27 UniRef50_C6HZU4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Le... 124 4e-27 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 124 5e-27 UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 124 5e-27 UniRef50_Q3A271 Sensor histidine kinase/FOG: GGDEF domain protei... 124 5e-27 UniRef50_A1STZ3 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 124 6e-27 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 124 6e-27 UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 124 7e-27 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 124 8e-27 UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 123 8e-27 UniRef50_Q084X5 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 123 9e-27 UniRef50_Q1H221 Diguanylate cyclase (GGDEF domain) n=1 Tax=Methy... 123 9e-27 UniRef50_A2SJB4 Diguanylate cyclase n=1 Tax=Methylibium petrolei... 123 9e-27 UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Hermini... 123 9e-27 UniRef50_C5S5K7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 123 1e-26 UniRef50_A3JAH6 Putative uncharacterized protein n=2 Tax=Marinob... 123 1e-26 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 123 1e-26 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 123 1e-26 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 123 1e-26 UniRef50_B4SIV8 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 122 1e-26 UniRef50_A5IHM1 Components of sensory transduction system n=4 Ta... 122 2e-26 UniRef50_Q30QH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 122 2e-26 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 122 2e-26 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 122 2e-26 UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica R... 122 2e-26 UniRef50_A1WXD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 122 2e-26 UniRef50_A7HLS0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 122 2e-26 UniRef50_C1CX77 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 122 2e-26 UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testostero... 122 2e-26 UniRef50_B8FXR2 Diguanylate cyclase n=2 Tax=Desulfitobacterium h... 122 3e-26 UniRef50_C4V482 Possible diguanylate cyclase n=2 Tax=Selenomonas... 122 3e-26 UniRef50_B1Y3T8 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii... 122 3e-26 UniRef50_A3WVM8 Putative uncharacterized protein n=1 Tax=Nitroba... 121 4e-26 UniRef50_A0JS55 Diguanylate cyclase n=2 Tax=Arthrobacter RepID=A... 121 4e-26 UniRef50_A4XSU4 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 121 4e-26 UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 121 4e-26 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 121 5e-26 UniRef50_C6C817 Diguanylate cyclase with hemerythrin-like metal-... 121 5e-26 UniRef50_A8I9A7 Putative uncharacterized protein n=1 Tax=Azorhiz... 121 5e-26 UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with... 121 5e-26 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 121 5e-26 UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nit... 120 6e-26 UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrery... 120 6e-26 UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 120 6e-26 UniRef50_UPI0001B57A43 diguanylate cyclase n=1 Tax=Streptomyces ... 120 7e-26 UniRef50_Q1D603 Response regulator n=2 Tax=Cystobacterineae RepI... 120 7e-26 UniRef50_A9FTU9 Putative membrane protein (GAF and GGDEF domain)... 120 7e-26 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 120 7e-26 UniRef50_A7N081 Putative uncharacterized protein n=6 Tax=Vibrio ... 120 7e-26 UniRef50_B3E7P2 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 120 7e-26 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 120 7e-26 UniRef50_C8QZT0 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 120 7e-26 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 120 8e-26 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 120 8e-26 UniRef50_Q31JG8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 120 8e-26 UniRef50_B1WVD6 Two-component response regulator n=7 Tax=Chrooco... 120 8e-26 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 120 8e-26 UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingo... 120 8e-26 UniRef50_D1B074 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 120 9e-26 UniRef50_Q1GXZ8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Methy... 120 9e-26 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 120 9e-26 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 120 9e-26 UniRef50_A1K7E0 GGDEF-domain containing protein n=1 Tax=Azoarcus... 120 9e-26 UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 120 1e-25 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 120 1e-25 UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter Rep... 120 1e-25 UniRef50_D1U9W6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 120 1e-25 UniRef50_D1B078 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 120 1e-25 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 119 1e-25 UniRef50_Q2SD41 Response regulator containing a CheY-like receiv... 119 1e-25 UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfoc... 119 2e-25 UniRef50_C6HY96 Diguanylate cyclase n=1 Tax=Leptospirillum ferro... 119 2e-25 UniRef50_A3K3F2 Intracellular signaling protein (PAS,GAF,GGDEF d... 119 2e-25 UniRef50_B0KLS6 Diguanylate cyclase n=2 Tax=Pseudomonas putida R... 119 2e-25 UniRef50_A6Q5K7 Signal transduction response regulator n=1 Tax=N... 119 2e-25 UniRef50_A8L354 Serine/threonine protein kinase n=1 Tax=Frankia ... 119 2e-25 UniRef50_C5T8S9 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 119 2e-25 UniRef50_B7IH39 Diguanylate cyclase n=2 Tax=Bacteria RepID=B7IH3... 119 2e-25 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 119 2e-25 UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomac... 119 2e-25 UniRef50_C1F1Q2 Sensory box/GGDEF family protein n=1 Tax=Acidoba... 119 2e-25 UniRef50_Q6AL41 Putative uncharacterized protein n=1 Tax=Desulfo... 119 2e-25 UniRef50_A8EWQ0 GGDEF/HAMP domain protein n=1 Tax=Arcobacter but... 119 3e-25 UniRef50_C6P353 Diguanylate cyclase/phosphodiesterase n=1 Tax=Si... 119 3e-25 UniRef50_C1SJG2 Diguanylate cyclase (GGDEF) domain-containing pr... 119 3e-25 UniRef50_UPI0000E11028 response regulator receiver modulated dig... 118 3e-25 UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobac... 118 3e-25 UniRef50_Q15XV6 Diguanylate cyclase n=1 Tax=Pseudoalteromonas at... 118 3e-25 UniRef50_D2BVZ5 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 118 3e-25 UniRef50_B2T0U2 Diguanylate cyclase n=1 Tax=Burkholderia phytofi... 118 3e-25 UniRef50_C5S9H9 Response regulator receiver modulated diguanylat... 118 3e-25 UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain prote... 118 3e-25 UniRef50_C6P3N4 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 118 3e-25 UniRef50_Q47MR9 GGDEF n=2 Tax=Streptosporangineae RepID=Q47MR9_T... 118 3e-25 UniRef50_C1F0W3 GGDEF domain protein n=1 Tax=Acidobacterium caps... 118 3e-25 UniRef50_Q31E96 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 118 3e-25 UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 118 3e-25 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 118 3e-25 UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geob... 118 4e-25 UniRef50_A6VWM3 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 118 4e-25 UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 T... 118 4e-25 UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuni... 118 4e-25 UniRef50_A8UVA1 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 118 4e-25 UniRef50_A5VC79 Diguanylate cyclase n=1 Tax=Sphingomonas wittich... 117 5e-25 UniRef50_B5YAJ1 Ggdef domain protein n=2 Tax=Dictyoglomus RepID=... 117 5e-25 UniRef50_B6BHU7 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 117 5e-25 UniRef50_Q30YD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 117 5e-25 UniRef50_C7R8C4 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 117 5e-25 UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 117 5e-25 UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix oren... 117 5e-25 UniRef50_C8X3T4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 117 5e-25 UniRef50_A6T2S6 Putative uncharacterized protein n=1 Tax=Janthin... 117 5e-25 UniRef50_A8GGC9 Diguanylate cyclase n=1 Tax=Serratia proteamacul... 117 5e-25 UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 117 6e-25 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 117 6e-25 UniRef50_Q07YS7 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 117 6e-25 UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longb... 117 6e-25 UniRef50_Q2RUX2 Putative diguanylate cyclase (GGDEF domain) with... 117 6e-25 UniRef50_A9C0A6 Diguanylate cyclase n=12 Tax=Betaproteobacteria ... 117 6e-25 UniRef50_C6BRI7 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 117 6e-25 UniRef50_C5V058 Response regulator receiver modulated diguanylat... 117 6e-25 UniRef50_A4CAZ6 GGDEF domain protein n=1 Tax=Pseudoalteromonas t... 117 7e-25 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 117 7e-25 UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein... 117 7e-25 UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthom... 117 7e-25 UniRef50_B4U7Y9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hy... 117 7e-25 UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clos... 117 7e-25 UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 117 7e-25 UniRef50_Q7NT69 Probable Two component sensor n=1 Tax=Chromobact... 117 7e-25 UniRef50_A9BUD4 Response regulator receiver modulated diguanylat... 117 8e-25 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 117 8e-25 UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 117 8e-25 UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 117 9e-25 UniRef50_A6Q428 Signal transduction response regulator n=1 Tax=N... 117 9e-25 UniRef50_A6EXN6 Putative uncharacterized protein n=1 Tax=Marinob... 117 9e-25 UniRef50_A6FCV1 Putative uncharacterized protein n=1 Tax=Moritel... 117 9e-25 UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reineke... 117 9e-25 UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 117 9e-25 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 117 1e-24 UniRef50_Q7MAB9 GGDEF DOMAIN PROTEIN n=1 Tax=Wolinella succinoge... 117 1e-24 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 117 1e-24 UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coah... 116 1e-24 UniRef50_A6Q9K1 Signal transduction response regulator n=1 Tax=S... 116 1e-24 UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzer... 116 1e-24 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 116 1e-24 UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=... 116 1e-24 UniRef50_Q1K456 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 116 1e-24 UniRef50_A3UFL0 GAF sensor diguanylate cyclase n=1 Tax=Oceanicau... 116 1e-24 UniRef50_A5W338 Diguanylate cyclase n=3 Tax=Pseudomonas putida R... 116 1e-24 UniRef50_D1CCW0 Diguanylate cyclase with GAF sensor n=1 Tax=Ther... 116 1e-24 UniRef50_D1B2B4 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 116 1e-24 UniRef50_A4BB60 Putative sensor protein n=1 Tax=Reinekea blanden... 116 1e-24 UniRef50_Q21ED1 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 116 2e-24 UniRef50_D1RSU9 Diguanylate cyclase n=1 Tax=Serratia odorifera 4... 116 2e-24 UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7... 116 2e-24 UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerob... 116 2e-24 UniRef50_D0I7V3 GGDEF family protein n=1 Tax=Grimontia hollisae ... 116 2e-24 UniRef50_A0L0Z2 Diguanylate cyclase n=13 Tax=Proteobacteria RepI... 116 2e-24 UniRef50_C4XTI2 Response regulator receiver protein n=1 Tax=Desu... 116 2e-24 UniRef50_C1SGT6 Diguanylate cyclase (GGDEF) domain-containing pr... 116 2e-24 UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobac... 115 2e-24 UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 115 2e-24 UniRef50_C6CBV2 Diguanylate cyclase n=9 Tax=Enterobacteriaceae R... 115 2e-24 UniRef50_A6FHQ7 PAS sensor diguanylate cyclase and phophodiester... 115 2e-24 UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 115 2e-24 UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkong... 115 2e-24 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 115 2e-24 UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S... 115 2e-24 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 115 2e-24 UniRef50_A1W3W7 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID... 115 2e-24 UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter di... 115 2e-24 UniRef50_B0SHT4 GGDEF domain protein n=2 Tax=Leptospira biflexa ... 115 2e-24 UniRef50_B0SDP7 GGDEF domain receiver component of a two-compone... 115 2e-24 UniRef50_A0L4N6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 115 2e-24 UniRef50_Q21GB7 Response regulator receiver modulated diguanylat... 115 2e-24 UniRef50_A6EXE2 Serine/threonine kinase with two-component senso... 115 2e-24 UniRef50_Q1N6U5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 115 2e-24 >UniRef50_P0AAP2 Protein adrA n=103 Tax=Enterobacteriaceae RepID=ADRA_ECOL6 Length = 371 Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/371 (100%), Positives = 371/371 (100%) Query: 1 MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTL 60 MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTL Sbjct: 1 MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTL 60 Query: 61 VSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNV 120 VSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNV Sbjct: 61 VSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNV 120 Query: 121 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPI 180 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPI Sbjct: 121 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPI 180 Query: 181 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR 240 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR Sbjct: 181 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR 240 Query: 241 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT 300 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT Sbjct: 241 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT 300 Query: 301 PAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 PAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK Sbjct: 301 PAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 Query: 361 KAGRNRTEVAA 371 KAGRNRTEVAA Sbjct: 361 KAGRNRTEVAA 371 >UniRef50_C1M7K1 Diguanylate cyclase AdrA n=9 Tax=Gammaproteobacteria RepID=C1M7K1_9ENTR Length = 366 Score = 557 bits (1436), Expect = e-157, Method: Compositional matrix adjust. Identities = 280/366 (76%), Positives = 312/366 (85%) Query: 6 MNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPP 65 MNDENF++K E L QN+HQRSGLRFARR+RLPRAVGL GMF PIAS LVS P Sbjct: 1 MNDENFYQKKVVPNEAFILLHQNDHQRSGLRFARRIRLPRAVGLGGMFFPIASVLVSQPI 60 Query: 66 PGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTA 125 G WWL+LVGWAFVWPHLAWQ+AS+A+DPL E NLK DA+LAG+W+G+MG+N+LPSTA Sbjct: 61 TGGWWLLLVGWAFVWPHLAWQLASKAIDPLHSEYTNLKADAILAGIWMGIMGINLLPSTA 120 Query: 126 MLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYP 185 +LMI+C+NLMGAGG R+F+AG VLMVVSCLVTL+LT I V+F+S L LSLP++V+YP Sbjct: 121 LLMIICINLMGAGGMRVFIAGAVLMVVSCLVTLQLTDIPVAFSSTQLSVLLSLPVLVVYP 180 Query: 186 LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 LLF WVSYQT +LAEHKRRLQVMSTRDGMTGVYNRRHWE +LRNEFDNCRRH RDATLL Sbjct: 181 LLFAWVSYQTLIRLAEHKRRLQVMSTRDGMTGVYNRRHWELLLRNEFDNCRRHQRDATLL 240 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA 305 IIDIDHFKSINDTWGHDVGD+AIVALTRQLQ+TLRGSDVIGRFGGDEFAVIM GT A SA Sbjct: 241 IIDIDHFKSINDTWGHDVGDQAIVALTRQLQMTLRGSDVIGRFGGDEFAVIMCGTSASSA 300 Query: 306 ITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 I AM RVHE L LRL PQV LRISVGVAPL + HYREWLKSAD+ALYKAK +GRN Sbjct: 301 IAAMSRVHERLTQLRLSCAPQVDLRISVGVAPLTSETEHYREWLKSADMALYKAKNSGRN 360 Query: 366 RTEVAA 371 RTE AA Sbjct: 361 RTEAAA 366 >UniRef50_C6DCM6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae RepID=C6DCM6_PECCP Length = 353 Score = 351 bits (900), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 169/350 (48%), Positives = 240/350 (68%) Query: 21 EPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVW 80 PP + +RSGLRF++RV +PR VG L IAS L++ P P W +L+ AF W Sbjct: 4 SPPTFLTVDVRRSGLRFSQRVYIPRIVGTILCSLFIASVLITKPIPLLLWGLLLLNAFAW 63 Query: 81 PHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGP 140 PH+A+ ++ R+ DP+ E NL D V G+W+G MGVN+LPS + ++ +N GG Sbjct: 64 PHIAYLLSLRSRDPMRCEKRNLLFDVVFGGIWIGFMGVNLLPSAVIAAMVGMNGTAGGGI 123 Query: 141 RLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLA 200 +LFV G++L V+C+ L L + VS ++ P++ + +P+++IYP+ G+V+Y TA KLA Sbjct: 124 KLFVQGILLQCVACVSVLVLFAVPVSLDTTPIQIYACVPMLLIYPIFLGYVTYNTALKLA 183 Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 EHKR L +S DGMT +YNR HWE +L++EFD C+R+ R ATL++ DIDHFK+ ND +G Sbjct: 184 EHKRMLMEVSIHDGMTNLYNRHHWERLLKHEFDLCQRYKRTATLVLFDIDHFKAFNDNFG 243 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H+VGD+AI+ L R+L R +DVIGRFGGDEFAVI+ T A A+ A+ R+ E L+ Sbjct: 244 HNVGDQAILLLARELTSGFRETDVIGRFGGDEFAVILPQTSAGEALDAVSRIRESLSLKF 303 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L TPQ+ + +SVG+A ++P+M Y +WLKSAD+ALY+AK GR RTEVA Sbjct: 304 LNQTPQLAVFVSVGIAEISPEMGQYMDWLKSADMALYRAKNKGRRRTEVA 353 >UniRef50_A8GB07 Diguanylate cyclase n=7 Tax=Enterobacteriaceae RepID=A8GB07_SERP5 Length = 353 Score = 339 bits (870), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 163/342 (47%), Positives = 221/342 (64%) Query: 29 EHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIA 88 + +RSGL FARR LPR VGL F+ + S + W W +L+ F+WPHLA+Q A Sbjct: 8 DTRRSGLSFARRTYLPRVVGLGIGFICVFSVFYTQKTSYWVWGLLIFHGFIWPHLAYQWA 67 Query: 89 SRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLV 148 R+ P EI NL D+ G+WV +M N LPS +L +M +N M + G LF GL Sbjct: 68 RRSAMPFKAEIRNLLIDSFFGGLWVAMMAFNALPSVVILSMMGMNNMASAGKSLFFKGLA 127 Query: 149 LMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQV 208 + V+S L L G S PL+ +L LP+I YP+L G V+Y+TA +LAE K+ L Sbjct: 128 VQVLSALAISALLGFPFQPQSTPLQIYLCLPMIYFYPILLGLVTYRTAKRLAEKKQELLR 187 Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 +S RDG+TG+YNRRHWE +L ++FD+CRR+ ATL+++DIDHFK+INDT+GH +GDEA+ Sbjct: 188 ISMRDGLTGLYNRRHWEHLLHHQFDSCRRYQHSATLILMDIDHFKTINDTFGHALGDEAL 247 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT 328 L +L I LR D++GR+GGDEF ++ T AE A A+LR+ E LN + PQ+ Sbjct: 248 AVLAEELLIGLRAVDIVGRYGGDEFGAVLPNTSAEQASIALLRIQERLNEIVFREAPQLR 307 Query: 329 LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L IS G+A + MS Y +WLK+AD ALY+AK GRNR E+A Sbjct: 308 LNISAGIADYHGDMSGYLDWLKAADNALYRAKNNGRNRLELA 349 >UniRef50_C6CCW8 Diguanylate cyclase n=3 Tax=Enterobacteriaceae RepID=C6CCW8_DICDC Length = 371 Score = 331 bits (848), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 156/339 (46%), Positives = 232/339 (68%) Query: 27 QNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQ 86 ++E +R+GL FARRV +PRA+GL F +A+ L P W W +LV F+WPH+A+ Sbjct: 11 ESERRRTGLAFARRVYMPRAIGLGLGFFYVAAALYGRQLPVWAWGLLVAHGFLWPHIAYL 70 Query: 87 IASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAG 146 ++SRA DP+ RE NL DA G+W+GVMG+N LPS ++ +M +N + AGG +LF+ G Sbjct: 71 VSSRARDPMRREYGNLLIDAAFGGIWIGVMGLNGLPSVLIMSMMGMNNIAAGGLKLFLQG 130 Query: 147 LVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRL 206 L + V+ V L L ++ + ++ + LP++ IYP+ G V+Y+TA KLAEHKRRL Sbjct: 131 LGVQVLCVAVFLLLIQSPINTATTTIQLYFCLPMLFIYPISVGLVTYRTAMKLAEHKRRL 190 Query: 207 QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDE 266 + MS DGMT +YNR+HWE +L+NEFD C R+ R ATL ++D+DHFK+IND +GH VGD+ Sbjct: 191 KEMSIHDGMTRLYNRQHWEQLLQNEFDICARYQRVATLALLDVDHFKTINDNFGHHVGDD 250 Query: 267 AIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ 326 A++ L+ L+ TLR +D+IGRFGGDEF ++ T + A + R+ E L +++L +TP Sbjct: 251 ALLLLSNGLKSTLRQADIIGRFGGDEFGIVFPETRVDEARLVVERLREYLESVQLHHTPL 310 Query: 327 VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 + + IS G+ + +MS +R W+++AD+ALY+AK GR Sbjct: 311 LRIGISAGLVQFSSEMSDHRAWMRAADMALYQAKNRGRG 349 >UniRef50_C4UJR8 Diguanylate cyclase n=4 Tax=Enterobacteriaceae RepID=C4UJR8_YERRU Length = 372 Score = 313 bits (802), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 152/360 (42%), Positives = 226/360 (62%) Query: 11 FFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWW 70 F K G + L + ++SG+ FA+R+ +PR GL L + S L++ P W W Sbjct: 12 FLKIRLNWGHQLSLYSRANSRQSGVHFAKRIYIPRIFGLGIGMLCVTSVLITQAMPVWIW 71 Query: 71 LVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIM 130 L+L+ +WPH+A+Q++ A P +E+ NL D++L G WV VM N LPS +L +M Sbjct: 72 LLLMINGLIWPHVAYQLSINADFPHRQELINLSIDSILGGTWVAVMSFNALPSVVILSMM 131 Query: 131 CLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGW 190 +N + +GG LF+ GL+L + S L+ L ++ + + + LP+I IYP L GW Sbjct: 132 SMNNIASGGKSLFIKGLLLQISSSLLVFWLFNLSFQPETTISQVYSCLPMIFIYPSLLGW 191 Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 V++ TA +L E+K L +S RDG+TG+YNRRHWE L N+FD+CRR+ ++L++IDID Sbjct: 192 VTFHTAKRLVENKEELLRISVRDGLTGLYNRRHWEHQLHNQFDSCRRYKHCSSLVLIDID 251 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 FK+INDT+GH VGD+AI L +L + LR D++GR+GGDEF I+ T AE A + Sbjct: 252 QFKTINDTYGHTVGDDAITVLAEELLLGLRAIDIVGRYGGDEFGAILPNTTAEQAREVLT 311 Query: 311 RVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 R+ L + +P + L+IS GVA P+M++Y++WLK+ D ALY AK GR+R E+A Sbjct: 312 RIQGKLAEIEFKQSPGLQLKISAGVAEFKPEMANYQQWLKAVDSALYHAKNNGRDRIELA 371 >UniRef50_B1J1G5 Diguanylate cyclase n=17 Tax=Pseudomonas RepID=B1J1G5_PSEPW Length = 361 Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 131/334 (39%), Positives = 195/334 (58%) Query: 33 SGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAV 92 GL F RR+ LPR +GL +A+ + PP W WL+L+ +WPHLA+Q A R++ Sbjct: 7 KGLSFVRRIYLPRVIGLGIGLFSVAAAVAPLSPPTWAWLLLLFNGLLWPHLAYQWARRSI 66 Query: 93 DPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVV 152 P E NL D+++ G W M N LP +L +M +N + AGG RL + GL+ +V Sbjct: 67 APYQAEQRNLLLDSLMGGFWTAAMHFNPLPCVTVLSMMTMNNVAAGGKRLVLRGLMAQLV 126 Query: 153 SCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTR 212 L+ L G + ++ PL+ + LP++ +YPL GWV Y+ A KLAEHKRRL+ +S Sbjct: 127 GVLLASALLGTGLQLDATPLQIYACLPMLTLYPLALGWVCYRLAIKLAEHKRRLRDLSLT 186 Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 D +TG+ N W+ +L F C+ + + +IDIDHFK+INDT+GH VGD + ++ Sbjct: 187 DSLTGLLNHGAWKDLLLLRFQACQNLQMPSVIALIDIDHFKTINDTFGHVVGDCVLRKMS 246 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRIS 332 +L+ LR D+ GR+GGDEF VI+ T A AM R+ E + R P P + + +S Sbjct: 247 DELRRNLRAGDLAGRYGGDEFCVILPDTSESEARQAMERLRERIVCYRDPQLPHLKISLS 306 Query: 333 VGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 +G++ + WL+ AD ALY AK+ GR++ Sbjct: 307 IGMSSFRADLQSPEHWLEKADKALYCAKRRGRDQ 340 >UniRef50_B2JNN3 Diguanylate cyclase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JNN3_BURP8 Length = 359 Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 130/343 (37%), Positives = 184/343 (53%), Gaps = 8/343 (2%) Query: 33 SGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAV 92 G F RV R GL F +AS LV W +LV FVWPH+A + A Sbjct: 11 QGKSFVERVYRLRIAGLGLGFFCVASVLVLQHRGAVLWSLLVFHGFVWPHVARRAALACE 70 Query: 93 DPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVV 152 P E NL DA+ G WV M NVLP+ +L ++ +N +GAGG LF G++ V+ Sbjct: 71 VPFRGEHLNLMIDAMFGGFWVVAMRFNVLPAALILAMVSMNNIGAGGLPLFARGVIAHVL 130 Query: 153 SCLVTLELTGITVSFNSAPLEWW----LSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQV 208 LV L +TV F +P+ LP ++IYPL G+ SY+ + KLA+ R L+ Sbjct: 131 GVLVGL----VTVGFMFSPMSQMPTILACLPFLLIYPLALGFTSYRLSLKLAQRTRELEH 186 Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 +S DG+T ++NRRHWE +L +EF+ CR + + L++ID+DHFK INDT GH GD + Sbjct: 187 LSRTDGLTRLWNRRHWEGLLADEFERCRANRYASCLMLIDLDHFKRINDTMGHPAGDAVL 246 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT 328 + L+ RG D IGR+GG+EF V++ G A T + + + + + Sbjct: 247 QSFADLLRSHFRGGDSIGRYGGEEFGVVLPGATLREAHTIAKVLVQRVREKTKEASKECP 306 Query: 329 LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 ISVG+A L + Y WL+ D +LY+AK GR+R V Sbjct: 307 CTISVGIAQLTDDLPDYHTWLQEVDRSLYQAKATGRDRIVVGG 349 >UniRef50_B3PC25 YaiC/YhcK/ArdA family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC25_CELJU Length = 330 Score = 224 bits (571), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 116/323 (35%), Positives = 192/323 (59%), Gaps = 10/323 (3%) Query: 56 IASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGV 115 + +TL P W W +L FVWPH+A+ +A R+ P RE +L+ DA G WV + Sbjct: 2 VGATLYPLKQPAWIWALLFLNGFVWPHIAYWLAKRSQSPFLREHLHLQLDAASGGFWVAL 61 Query: 116 MGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVL----MVVSCLVTLELTGITVSFNSAP 171 MG N L S +LM++ +N + AGG RLF+ G+V +++ LV + +S P Sbjct: 62 MGFNPLGSCLILMMLWMNNIAAGGFRLFLRGVVTSLAGLLMGLLVVRSFLHWEFNLSSDP 121 Query: 172 LEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNE 231 + + +LP++VIYPL G ++Y+ A +L K L+ +S DG+TG++NR +WE + Sbjct: 122 VMIYAALPMLVIYPLAIGSITYRFAMQLHSQKELLKHLSRTDGLTGLFNRSYWEERVLAL 181 Query: 232 FDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGD 291 + +R + L+++D+DHFK INDT+GH GD+ + + + LQ+ LR +++GR+GG+ Sbjct: 182 INQTQRSGQPLCLVLLDVDHFKMINDTYGHGRGDQILQQIAQCLQVNLREHELLGRYGGE 241 Query: 292 EFAVIMSGTPAESAITAMLRVHEGLNTLRL-----PNTPQVTLRISVGVAPLNPQMSHYR 346 EFA+ ++ T +A+ R+ + + T+ P + IS+G+AP P +S + Sbjct: 242 EFALALANTSLPAALATAERLRQAVATMNFADEHEPRLAPLCCSISLGLAPWQPGIS-FL 300 Query: 347 EWLKSADLALYKAKKAGRNRTEV 369 EW ++AD ALY+AK+ GRNR+ + Sbjct: 301 EWQRAADQALYQAKREGRNRSCI 323 >UniRef50_A4WAF6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae RepID=A4WAF6_ENT38 Length = 351 Score = 210 bits (535), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 113/339 (33%), Positives = 179/339 (52%) Query: 28 NEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQI 87 +H+ G RF +R+ L R +G F+PI + L+ H W L+L AFVWP +AW+ Sbjct: 9 KQHRLPGNRFVKRMFLMRILGTFLCFIPILTVLIQHQRSEWLMLLLAFNAFVWPTVAWRR 68 Query: 88 ASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGL 147 A R+V PL+ E NL DA G W+ +M VN LPS + I+ + + AGG L Sbjct: 69 ARRSVTPLATEHQNLVVDAGAGGFWIAMMAVNPLPSVVIATILLADRLSAGGFVLMRKAA 128 Query: 148 VLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQ 207 V M+V L + G+ V + + +LP+I IY + ++ A +L R L+ Sbjct: 129 VAMLVVFLAAWLMQGMAVVMTVSQQTMFATLPLIAIYIIALSVMTDSIAIRLRVKSRELE 188 Query: 208 VMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEA 267 ++ D + + NRR E + E ++ +R++ L+ IDID+FK +ND +GH VGD Sbjct: 189 RIAMMDPLLDIANRRLLEKRIEKELKTLQQASRESALMFIDIDNFKEVNDRFGHKVGDTL 248 Query: 268 IVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV 327 + ++ L + R +D R GGDEF +++ T E A R+ E + V Sbjct: 249 LATVSEILHLATRQTDTPARLGGDEFVILLPNTSIEEAHVVASRIMEAAAVMDDVAEEAV 308 Query: 328 TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 +S+G+A +M + +WL++AD ALY+AK+ G+NR Sbjct: 309 NCTLSIGIAGATREMENVTDWLQAADTALYQAKRGGKNR 347 >UniRef50_C6CCY7 Diguanylate cyclase n=2 Tax=Enterobacteriaceae RepID=C6CCY7_DICDC Length = 359 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 180/350 (51%), Gaps = 10/350 (2%) Query: 22 PPLTPQNEHQR-SGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVW 80 P +P +H + RF RR+ L R +G F PIAS L +L+LV AFVW Sbjct: 5 PYYSPDTDHLKLRAFRFIRRMFLMRQLGTFLCFFPIASVLYELSRSWPLFLLLVLNAFVW 64 Query: 81 PHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGP 140 PH+A+ ++S A DP+ E N+ D G WV +MGV LPS ++ I+ + AGG Sbjct: 65 PHIAYAVSSHARDPVKAEFINMTLDTAFGGAWVALMGVCPLPSAIIISILIADRYAAGGW 124 Query: 141 RLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLA 200 +L V VS ++ L + WL+LP+ IY + VSYQ A +L Sbjct: 125 KLLRMSTVASFVSFILVWTLLRFEHYTVLSERTLWLTLPLSTIYMITLSVVSYQLAARLR 184 Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 E R L+ ++ D + NRR +E L EF +R A L++ID+DHFK +ND++G Sbjct: 185 EKSRELERITLMDPYLSIPNRRLFEQRLDKEFLRTQRGESHAYLMLIDVDHFKYVNDSYG 244 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H+ GD + ++ L+ DV RFGGDE +I+ + + ++H + T+R Sbjct: 245 HEAGDYLLTEISVVLRNIAGKYDVPARFGGDELGIIIQNSTDKIVTMTAHQLHAKVATIR 304 Query: 321 LPNTPQVTLRISVGVA----PLNPQMSHYREWLKSADLALYKAKKAGRNR 366 LP P IS+G+A PQ WL SAD ALY AKK+G+NR Sbjct: 305 LPADPTFCCTISIGIARAEHAATPQ-----SWLNSADQALYAAKKSGKNR 349 >UniRef50_C7HYH7 Diguanylate cyclase n=1 Tax=Thiomonas intermedia K12 RepID=C7HYH7_THIIN Length = 368 Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 109/328 (33%), Positives = 174/328 (53%) Query: 39 RRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSRE 98 RR+ R VG+ L IA L+ W W +++ +WP +A A + D E Sbjct: 24 RRIYPLRVVGMGLGGLAIAGVLIEQHAHPWRWALMIVSCLLWPQIALLRARLSADSYRAE 83 Query: 99 IYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTL 158 +NL D+ +AGMWV +M N+LPS ++ + + + +G RL++ L + + ++T Sbjct: 84 KHNLLIDSAIAGMWVALMHFNLLPSVVLVTVTTFDKLSSGMRRLWLISLPGLFGAAVLTA 143 Query: 159 ELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV 218 + V S+ L +LP++V++ L SY+ ++ L+ + D TG+ Sbjct: 144 LILRPPVQLESSLLIVACTLPLLVVHTLSSSIGSYRLIRTVSRQNTLLEQLRRTDAQTGL 203 Query: 219 YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQIT 278 + R HW+ + + A LL+ID+DHFK +NDT+GH GD+AI A+ + ++ Sbjct: 204 FARDHWQQQADAALQLFQAVGQPACLLMIDVDHFKQVNDTYGHTAGDDAIRAVGQLIRDC 263 Query: 279 LRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPL 338 +R D GR+G DEFAV+ T A+ R+ L TLRLP+ P V L S+GVA Sbjct: 264 IREEDCAGRYGDDEFAVLCQNTGQPDALGIAERIRTELLTLRLPHHPNVRLSSSIGVAAA 323 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNR 366 P S+ + W+++AD ALY AK GRN+ Sbjct: 324 APAFSNLQAWMQAADAALYSAKHQGRNQ 351 >UniRef50_C5T000 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T000_ACIDE Length = 350 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 2/299 (0%) Query: 68 WWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAML 127 W W+ LV +F+WPH+A+Q + + +P EI NL D+ L V +M N+LPS ++ Sbjct: 41 WAWMALV--SFIWPHVAYQFSRLSGEPYRAEIRNLLLDSALVTALVPLMHFNLLPSVLLI 98 Query: 128 MIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLL 187 + ++ + G L++ L M V L LTG + ++ LP++ ++ + Sbjct: 99 TLTVVDKITTGIRGLWLRSLPGMAVGMLAGGALTGFEWAPTTSMPVIIACLPVMALHTVS 158 Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 SY+ +++ + L + D +TG+Y R HW+ A L+++ Sbjct: 159 VSVASYRLIRQVSRQNQLLDELRRIDALTGLYGRGHWQEQAEAALRLHHATGEPACLVML 218 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DIDHFK IND GH VGDEAI AL ++ +R +D GR+GGDEFA+++ G + A+ Sbjct: 219 DIDHFKQINDLHGHTVGDEAIRALAHIVRSNVRTTDCAGRYGGDEFAIVLRGMHMDKALA 278 Query: 308 AMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R+ E + +RL + P++ S+GVA + + S R W +AD LY+AK +GRNR Sbjct: 279 VAQRICEQVQAMRLHDMPELQFTSSLGVAAADHRHSSLRAWTDAADAELYQAKASGRNR 337 >UniRef50_A9C166 Diguanylate cyclase n=3 Tax=Comamonadaceae RepID=A9C166_DELAS Length = 386 Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 115/333 (34%), Positives = 171/333 (51%), Gaps = 16/333 (4%) Query: 46 AVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTD 105 ++ L G+ + A T + P W VLV A VWPH+A+ A + D E NL+ D Sbjct: 18 SMALGGLVVGTAMTEMG-ASPAVWGFVLVS-ALVWPHIAFLHARHSRDSHRAEHANLQID 75 Query: 106 AVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITV 165 A++ G W+ VM LPS A+L I + R A + S + TL + Sbjct: 76 ALIIGSWIPVMHFCALPSIALLAISIAD-------RNHTATRDGWLQSLVATLLAAALVA 128 Query: 166 SFNSAPLEWWLSLPI-------IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV 218 +W SL + ++++ + W + Q KLA +LQV+S D +T + Sbjct: 129 LLLRPVPDWEASLAVQLSMLPLLLLHSVFSSWSTRQLVRKLARQNVKLQVLSRIDPLTTL 188 Query: 219 YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQIT 278 Y+R +W R + R+ A LLI+DIDHFK IND++GH VGDE + A+ ++ Sbjct: 189 YSRDYWWQKARAALRDYRQTQASACLLIVDIDHFKRINDSFGHTVGDEVLQAIGLTIRHC 248 Query: 279 LRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPL 338 LR D GR+GGDEFAV+ T + A LR+ L+ LR+ PQ+ + S+GVA Sbjct: 249 LRSHDAAGRYGGDEFAVLCMHTQLDDAYAVALRIRNQLSQLRVREHPQLRVSASIGVAAA 308 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 +P ++W+ +AD ALY AK AGR++ AA Sbjct: 309 DPSFLSVKDWINAADSALYSAKDAGRDQVIPAA 341 >UniRef50_Q6FA46 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FA46_ACIAD Length = 352 Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 101/330 (30%), Positives = 165/330 (50%), Gaps = 1/330 (0%) Query: 36 RFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPL 95 R+ R+ + R +G F I S L +++L AFVWP A+ A D + Sbjct: 19 RYVFRIFVMRQIGTILCFFSIFSVLYYLNYHEIIYVLLALNAFVWPIAAYLYAKNKKDGV 78 Query: 96 SREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCL 155 +L DA L GMWV +M ++ LPS M+ I+ + AGG ++ L+ M+ L Sbjct: 79 RTTNISLIVDAALGGMWVAIMKISPLPSLIMVAILVSDRFAAGGWQILRPSLIAMLGIFL 138 Query: 156 VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGM 215 + TG V+ + + W SLP+ IY + ++ + A +L + R + ++ D Sbjct: 139 IFWSFTGFQVNLSFNEMMVWSSLPLATIYLISLSILTRKLAVQLIQKNREFERIALMDPR 198 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQL 275 + NRR +E L + F +R+ A L+++D+DHFK INDT+GH+ GD + ++ L Sbjct: 199 LHIPNRRLFEQRLSSIFMQTQRNASSAHLILLDVDHFKKINDTYGHEAGDYFLAEMSSIL 258 Query: 276 QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGV 335 + + D RFGGDE A+I+ E I R+ + +RL + P+ + +S+G+ Sbjct: 259 RELIGPKDTPARFGGDELAIIVVDQSNEEIILLARRIKNSIQQIRLQSDPEFSTTVSIGI 318 Query: 336 APLNPQMSHYREWLKSADLALYKAKKAGRN 365 A + W AD ALY+ K+ GRN Sbjct: 319 ASAET-VDTVSAWFALADKALYQVKRNGRN 347 >UniRef50_B5RJW5 MASE2 domain/diguanylate cyclase n=2 Tax=Klebsiella pneumoniae 342 RepID=B5RJW5_KLEP3 Length = 352 Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 98/329 (29%), Positives = 168/329 (51%), Gaps = 1/329 (0%) Query: 37 FARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLS 96 F +RV R +G+ FLPI S L +L+ A WP +A+ + + D LS Sbjct: 18 FIKRVYFLRQIGVVLCFLPIYSVLQEQSHQKITIALLILNALTWPSVAYLASMMSKDMLS 77 Query: 97 REIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLV 156 E N+ D+ AG+W+ VM V+ +PS ++ + + AGG ++ L+ M++ L Sbjct: 78 TEKKNMILDSFWAGIWIAVMQVSPIPSLFIISVQIADRYAAGGWKILKPALMWMMIGFLT 137 Query: 157 TLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMT 216 + + LSLP+ YP++ VS + KL + + L+ + D Sbjct: 138 VWLANDFKYTIEFSTRTVLLSLPLATCYPIVLSIVSRHLSIKLRKRRELLEKQALMDPGL 197 Query: 217 GVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ 276 + NRR +E + + F R+ + L++ID+D+FK INDT+GH+VGD + ++ L+ Sbjct: 198 DLPNRRFFEQKMESAFRATRKKRIHSYLMLIDVDNFKKINDTYGHEVGDAVLSRISTILR 257 Query: 277 ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVA 336 DV RFGGDE A+I++ + ++ I + + E + L LP+ + +S+G++ Sbjct: 258 ECAGEKDVPARFGGDELAIIVNNSNSKLVIAMVHIIQEKIKDLSLPSHNDIYCTVSIGIS 317 Query: 337 PLNPQMSHYREWLKSADLALYKAKKAGRN 365 + S EW+K AD LY+ K+ G+N Sbjct: 318 CAENKESII-EWIKEADEMLYEVKRNGKN 345 >UniRef50_UPI0001AF38B9 GGDEF domain-containing protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF38B9 Length = 249 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 83/231 (35%), Positives = 127/231 (54%) Query: 136 GAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQT 195 A GPRL G+ + L++L L V+ + + +P++VIYP++ GW+S+Q Sbjct: 1 AAAGPRLMFQGIFAQALGVLISLALLNPVVNLQGNMAQIYACVPVLVIYPIVIGWLSHQV 60 Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 KL EH+ L+ +S D +TG+ N W+ +L EF + + + +IDIDHFK + Sbjct: 61 TLKLCEHRNILRKLSRTDSLTGLLNHGAWKDLLDLEFTKSQNAYQHCVIALIDIDHFKVV 120 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH +GD + ++ L LR SD+IGR GGDEF VI+ T A + R+ Sbjct: 121 NDTYGHIMGDTVLQNISEALLDNLRDSDLIGRCGGDEFCVILPDTSLIQARETLERMRLA 180 Query: 316 LNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 ++ + + + +S+G+A +MS WL AD ALY AK GRNR Sbjct: 181 IDKMTHSRHCDLKVSLSIGIAAYMSEMSDAASWLHEADKALYLAKSTGRNR 231 >UniRef50_A4BIU7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BIU7_9GAMM Length = 318 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 71/168 (42%), Positives = 111/168 (66%), Gaps = 3/168 (1%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 RL +S DG+T +YNR +WE ML NEF +RH D +L++ DIDHFK +NDT+GH VG Sbjct: 151 RLAQLSRTDGLTQLYNRAYWEEMLSNEFKRQKRHAHDLSLIMFDIDHFKKVNDTYGHQVG 210 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 D+ I A+ +++ R +D+ GR+GG+EFA+++ + AE+A+ R+ + + R+ T Sbjct: 211 DDVIRAVAEEVRHNSRNTDIAGRYGGEEFALLLIDSDAENALLFAERLRKAIENRRVS-T 269 Query: 325 PQVTLRISV--GVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 P+ L+++V GVAP HY W+++AD ALY +K GRNR+ ++ Sbjct: 270 PEGELQVTVSLGVAPWKESFHHYNAWIEAADKALYTSKDEGRNRSTLS 317 >UniRef50_Q2BP76 GGDEF domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP76_9GAMM Length = 322 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 108/169 (63%), Gaps = 1/169 (0%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L + ++LQ +S D +TG++NR +WE L NEF+ R +TL++ DIDHFK +ND Sbjct: 145 ELQQANKKLQALSREDRLTGLFNRGYWEECLNNEFERFNRSQMTSTLVMFDIDHFKRVND 204 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 T+GH GDE I + L+ R +D++GR+GG+E+ I++GT E+A+ R+ + Sbjct: 205 TYGHQAGDEVIRVVADTLREQARKTDILGRYGGEEYGAILTGTNGENAMIFAERLRARIE 264 Query: 318 TLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 +L +P Q+ IS+GV+ L + +EWL+ +D ALYK+K++GRN Sbjct: 265 SLVVPYGEHQLKFTISIGVSELTYEHDSPKEWLEQSDQALYKSKQSGRN 313 >UniRef50_B8K6R1 Sensor protein n=8 Tax=Vibrionaceae RepID=B8K6R1_VIBPA Length = 321 Score = 140 bits (353), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 68/172 (39%), Positives = 108/172 (62%), Gaps = 1/172 (0%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L + ++L +S DG+T ++NRR+WET L E+++C+ ++L+I DIDHFK +NDT Sbjct: 143 LMDSNQKLSDLSRTDGLTQLFNRRYWETCLMKEYESCKISGAVSSLVIFDIDHFKRVNDT 202 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL-N 317 +GH VGD I +L+ R SDV GR+GG+EF V++ GT A A+ R+ + + + Sbjct: 203 YGHTVGDHVIRHTANELRKASRTSDVCGRYGGEEFTVLLPGTCANQALYFTERLRKKIES 262 Query: 318 TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 ++ V IS+G+ ++P S++ WL+ AD ALY +K+ GRNR+ V Sbjct: 263 SIVECEGYNVKYTISLGICEISPYQSNHLNWLEHADKALYFSKETGRNRSTV 314 >UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammaproteobacteria RepID=B3PIC1_CELJU Length = 322 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 117/194 (60%), Gaps = 8/194 (4%) Query: 181 IVIYPLLFGWVSYQTATKLAEH--KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRH 238 ++IY V+ K+A+ ++LQ +S D +T ++NR +WE L EF R+ Sbjct: 133 VIIYD-----VTDTAVNKIAQQHANKQLQNLSRTDHLTSLFNRGYWELRLIQEFKRYDRY 187 Query: 239 NRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMS 298 ++L+++DIDHFK IND +GH VGDEAI ++R ++ +R D+ GR+GG+EF +I++ Sbjct: 188 ESPSSLIMLDIDHFKKINDNYGHTVGDEAIRCVSRVIKEQVRDLDIAGRYGGEEFGIILT 247 Query: 299 GTPAESAITAMLRVHEGLNTLRL-PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALY 357 T + A R+ + + ++ IS+GVA LN M +R+W++ AD ALY Sbjct: 248 STNGDGACVIAERLRSIIEKQTVYAEGHEIHFTISLGVAELNDHMHDHRQWIEKADHALY 307 Query: 358 KAKKAGRNRTEVAA 371 K+K++GRNR ++A Sbjct: 308 KSKESGRNRCTLSA 321 >UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TWE2_ACIAC Length = 377 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/321 (32%), Positives = 158/321 (49%), Gaps = 26/321 (8%) Query: 70 WLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMI 129 W+VLV V+P LA+ A A E+ N+ D + G+W G++G+ V + + + Sbjct: 57 WVVLVVQFLVYPQLAYWTARSAPRQAKAELRNMVVDNLFGGLWAGLLGMPVWITFTLFIG 116 Query: 130 MCLNLMGAGG-PRLF--VAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPL 186 C+N++ G P L VA + ++ LV + ++A L + + ++ Sbjct: 117 NCINVVAFHGYPGLLRLVAAMGCGLLGGLVLYGDRPLHPDIDTA--TSLLCILALTLFLT 174 Query: 187 LFGWVSYQTATKLAEHKRRL--------------QVMSTRDGMTGVYNRRHWETMLRNEF 232 +F SY+ A + + RL Q + RD +TG+YNRRH + L +E Sbjct: 175 VFAHTSYRRAMEQQKSNDRLREQFEEIRALQDQLQEQAVRDPLTGLYNRRHLDATLASEI 234 Query: 233 DNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDE 292 C +L++IDIDHFK INDT GH GD + AL + LQ +R D+ R GG+E Sbjct: 235 ARCGAQGLPLSLMMIDIDHFKRINDTHGHAAGDAMLQALAQLLQRHVRVRDLACRLGGEE 294 Query: 293 FAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV-TLRISVGVAPLNPQMSHYREWL-- 349 F +++ TP A + E L++ + P+V + +S GVA PQ H R+ L Sbjct: 295 FVLLLPETPLAVARERAEALREAFEALQVRHDPEVLSATLSCGVAAF-PQ--HARQPLAL 351 Query: 350 -KSADLALYKAKKAGRNRTEV 369 SAD ALY AK GRNR V Sbjct: 352 TASADEALYAAKMQGRNRVVV 372 >UniRef50_B8GR45 Diguanylate cyclase with PAS/PAC sensor n=27 Tax=Gammaproteobacteria RepID=B8GR45_THISH Length = 332 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 5/176 (2%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L + L +S D +T + NR WE L EF C+R+ ++L++ DIDHFK +NDT Sbjct: 144 LEKANEELACLSRTDRLTQLNNRGFWEECLGGEFARCKRYGTVSSLIMFDIDHFKKVNDT 203 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA---ITAMLRVHEG 315 +GH GDE I +++ L TLR +D+ GR+GG+EF VI++ T AE A + R++E Sbjct: 204 YGHQAGDEVIRTVSQLLTKTLRDTDIAGRYGGEEFGVILTDTSAEKARVFADRLRRLNEA 263 Query: 316 LNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + T+R + + IS+G+A +P M + +W+++AD ALY +K+ GRNR VA Sbjct: 264 V-TVRHEDVA-IRFTISLGIAQFDPAMERHSQWIEAADKALYLSKQGGRNRVTVAG 317 >UniRef50_B4SNB1 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SNB1_STRM5 Length = 350 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/344 (28%), Positives = 160/344 (46%), Gaps = 1/344 (0%) Query: 22 PPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWP 81 P L E G+ ARR+ R VG +PIAS ++ W W++L+ A WP Sbjct: 2 PFLIDATEVAVEGIGAARRIGWMRFVGNGLGAIPIASIILERQDGAWAWVLLLLNALAWP 61 Query: 82 HLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPR 141 LA + R+ P + + D+ G W+ M ++ +PS ++ + + AGG R Sbjct: 62 ALALLLTHRSRQPAVVQFRCMVADSFFGGGWIAFMALSAVPSALFAALLVADKIAAGGVR 121 Query: 142 LFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAE 201 L + + +V+ L++ G S+ LS+P + +Y + +S+Q A ++ Sbjct: 122 LAMRATLALVLGFLLSWWALGFPYQPISSQRTIVLSVPFLFVYGIGLSILSWQLARRVKS 181 Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 R+LQ +S D + + NR + D + A LL++D+D FK IND+ GH Sbjct: 182 QNRQLQRLSRMDPLVELANRGFLILRAQQVLDKAQGQGGFACLLMLDVDDFKRINDSHGH 241 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 GDE + + L+ R D+ R GGDEF V++ A+ R+ L Sbjct: 242 RAGDEVLRQIAATLREFARPGDIPARLGGDEFVVLLRDCTTRDAMHVAERIRLHLLEAAR 301 Query: 322 PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 P V +S+G+A P +WL +AD ALY AK+ G+N Sbjct: 302 QVAPGVEFSVSIGIAA-TPGQGTVEDWLATADKALYHAKRQGKN 344 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 102/166 (61%), Gaps = 3/166 (1%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 + + +S D +TG+YN+ + +L+ E +R+ R +L+I DIDHFK INDT+GH VG Sbjct: 300 KFRYLSETDRLTGLYNKGKFNEVLQREIQRAKRYKRPLSLIIFDIDHFKKINDTYGHKVG 359 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 DE + AL + ++ +R +D R+GG+EF ++ T E A ++ + + T + P Sbjct: 360 DEVLKALAKLIKKNIRKTDFAARWGGEEFVILAPETNVEGAKKLAEKLRQAVETYKFPTV 419 Query: 325 PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 +VT IS+GVA L P +++ AD+ALYKAK+ GRNR E+A Sbjct: 420 GKVT--ISLGVAQLEPDEKP-EDFIVRADMALYKAKEGGRNRVEIA 462 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 106/188 (56%), Gaps = 6/188 (3%) Query: 186 LLFGWVSYQTAT---KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDA 242 L G +YQ +L E +RL+ + D +T V+NR H E L E C+RH RD Sbjct: 502 LAIGASAYQIEQLNQELTEANQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRHGRDL 561 Query: 243 TLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPA 302 ++++DIDHFK +ND +GHDVGD+ + ++ + LR SDV GR+GG+EF +I T Sbjct: 562 AVILLDIDHFKRVNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEEFLIIAPETDL 621 Query: 303 ESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 ESA R+ L+ L+ QVT S GVA L P +K AD ALY+ K++ Sbjct: 622 ESANQLAERLRRRLSNLQFDKVGQVT--ASFGVAELLPSEDR-NSLVKRADNALYQVKES 678 Query: 363 GRNRTEVA 370 GRN EV+ Sbjct: 679 GRNSVEVS 686 >UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W79_COLP3 Length = 334 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 100/164 (60%), Gaps = 1/164 (0%) Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 +S DG+T VYNRRHW+ L E+ RRH++ +L+++D+DHFK +ND +GH GD + Sbjct: 167 ISRIDGLTQVYNRRHWQDSLEQEYAKARRHDKKLSLIMLDLDHFKLLNDNYGHQGGDMVL 226 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV- 327 + ++ + LR D GR+GG+EFA+I+ T + AI R+ + T QV Sbjct: 227 IEVSALISTLLRVEDTFGRYGGEEFAIILPETDSAGAIELAQRICRIIATTPFTYNDQVI 286 Query: 328 TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + +S+GVA L+ + S+Y E + AD ALY+AK GRN+ AA Sbjct: 287 KVTVSLGVAQLSSKESNYEELITQADSALYQAKSQGRNQVCNAA 330 >UniRef50_Q2BML0 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BML0_9GAMM Length = 577 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 84/252 (33%), Positives = 140/252 (55%), Gaps = 18/252 (7%) Query: 125 AMLMIM---CLNLMGAGGPRLFVAGLVLMVVSCLVT-LELTGIT----VSFNSAPLEWWL 176 A+LMI+ C L G R F+ V ++S ++T ++GI + F++ +E+ + Sbjct: 324 ALLMIIAGACACLNGVKEARYFLGAAVFAMISAVITAFTVSGIVEYKAIGFHA--VEYGM 381 Query: 177 SLPIIVIYPLLFGW-VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNC 235 +I +LF ++YQ E K Q ++ RD +TG+YNRR ++ ++ F N Sbjct: 382 -----LIEAVLFALALAYQFRIN-QEEKVAAQQLADRDQLTGLYNRRGFDKVMEPVFGNA 435 Query: 236 RRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAV 295 RH+R+ LL++DIDHFK+IND GH GD + L + LQ LR D+I R+GG+EF + Sbjct: 436 YRHHRELCLLVLDIDHFKAINDRHGHGYGDLVLTDLAKVLQHELRAGDLIARWGGEEFLL 495 Query: 296 IMSGTPAESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADL 354 ++ T A+T R+ ++ + + Q +S+G+A L P + +++ L AD Sbjct: 496 LLPETNHMEAVTLAERLIRNISNREVEGDGVQEHYTVSIGIAELKPPIVSFKQLLVEADK 555 Query: 355 ALYKAKKAGRNR 366 LY+AK+ GRN+ Sbjct: 556 HLYRAKETGRNK 567 >UniRef50_Q5DZD0 GGDEF domain protein n=16 Tax=Vibrionaceae RepID=Q5DZD0_VIBF1 Length = 320 Score = 134 bits (336), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 64/172 (37%), Positives = 104/172 (60%), Gaps = 1/172 (0%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L +L +S DG+T +YNR +WE+ L+ EF+ R R +++++ DIDHFK +ND Sbjct: 142 LENSNHQLSTLSKIDGLTQLYNRAYWESCLKKEFNEARAAERVSSIVMFDIDHFKKVNDN 201 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL-N 317 +GH VGD+ I L+ T R +D+ GR+GG+EF VI+ T AE A R+ + + N Sbjct: 202 FGHTVGDDVIRDAAELLRKTSRNTDICGRYGGEEFTVILPYTNAEQAFYFTERLRKRIEN 261 Query: 318 TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + ++ R+S+G+ L+ + + WL++AD ALY +K+ GRN++ V Sbjct: 262 STISTENEEIHYRVSLGICELSNEHPDHLSWLEAADKALYYSKENGRNQSNV 313 >UniRef50_Q1K364 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K364_DESAC Length = 284 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 132/236 (55%), Gaps = 17/236 (7%) Query: 150 MVVSCLVTLELTGITVS---FNSAPLEWW-LSLPIIVIYPLLFGWVSYQTATKLAEHKRR 205 M +S LV L +G + F + +W L +P+I + +F + + A+ R Sbjct: 40 MFLSVLVCLFFSGYALYALLFWNEAQQWHDLVVPVIFFFGAIFVLTVCLLSARTADDVTR 99 Query: 206 L---QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 L + + D + G+YNRRH + LR+E D RR+ D ++L+ID+D FK +NDT+GH Sbjct: 100 LCHLEYENILDPLLGIYNRRHMDRCLRSEADKTRRYALDLSVLLIDVDFFKKVNDTYGHL 159 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL- 321 VGD ++AL + ++ ++R D++ R+GG+E V++ T + A T R+ + ++ L Sbjct: 160 VGDRVLLALAQMIKGSVRDFDMVFRYGGEEIMVLLPYTNSSGAQTLGSRLCQWVSERSLL 219 Query: 322 -------PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 P QVT IS+GV+ +P + E + AD+ALY+AKK GRNR EVA Sbjct: 220 EEVHQGQPVNVQVT--ISIGVSTFDPAVEDEGEMVARADMALYRAKKNGRNRVEVA 273 >UniRef50_Q39SX4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SX4_GEOMG Length = 353 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 72/184 (39%), Positives = 113/184 (61%), Gaps = 6/184 (3%) Query: 187 LFGWVSYQTATKLAEHKR--RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 FG V A LA + RL+ +S RD +TG+YNRR +E ML E + +R + +L Sbjct: 162 FFGGVVENLARSLAAARECDRLKNLSMRDHLTGLYNRRVFEAML--EVEARKRTTKPFSL 219 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 L+ID+D FK +NDT+GH GD+ +VA+ + L+++ R SDV+ R+GG+EF V++ T +S Sbjct: 220 LLIDLDDFKRVNDTYGHGAGDQVLVAVAKMLRLSFRKSDVVSRYGGEEFGVLLPDTSQDS 279 Query: 305 AITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKA 362 A R + + TL LP N ++ +SVG+A + ++ + ++ AD ALY+AK Sbjct: 280 ARVVAERFRQNVATLSLPVNKEKIMPTVSVGIASVTLRLGIEVADVIEEADRALYQAKVT 339 Query: 363 GRNR 366 G+NR Sbjct: 340 GKNR 343 >UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLJ7_9GAMM Length = 478 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 105/186 (56%), Gaps = 4/186 (2%) Query: 186 LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 L FG +S T + RRL S D +TG+YNR+H++ E R+N+ T+L Sbjct: 280 LTFGALSAYTCVLM----RRLYQRSVTDSLTGLYNRQHFKFRAEQEASRAVRYNQPLTML 335 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA 305 +IDID FK IND +GH GD + ++ ++ LR SD++GR+GG+EF V++ + E A Sbjct: 336 MIDIDQFKQINDKFGHQTGDTVLQQASQYIRDNLRESDLLGRYGGEEFIVLLPQSDLEQA 395 Query: 306 ITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 R+ + L+ V++ +SVG+A +P Y E + AD ALY AK+ GRN Sbjct: 396 TQCADRIRDSLDKSIFIYGSLVSISVSVGLAQQSPDTFVYDELVSQADQALYTAKRNGRN 455 Query: 366 RTEVAA 371 R E+ A Sbjct: 456 RIEIYA 461 >UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepID=Q21NS3_SACD2 Length = 319 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 1/166 (0%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 +L +S DG+TG+ NR+ WE E+ +RH +L++ DIDHFK+IND++GH G Sbjct: 151 QLHEISRTDGLTGLLNRKTWELDAEQEYKRFKRHEHPCSLVMFDIDHFKNINDSYGHPAG 210 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 DE I ++ +R D+ GR+GG+EF +++S T E A+ R+ + L + Sbjct: 211 DEVIRQTAAAVKSCIRDIDIAGRYGGEEFTIVLSDTDTEGALVVAERIRNQIQELTVHYE 270 Query: 325 P-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + +S+GVA L QM++ W+ AD ALY+AKK GRN + V Sbjct: 271 DFAIQFTVSLGVAQLTQQMTNRTAWIDCADKALYQAKKNGRNNSVV 316 >UniRef50_Q21V79 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21V79_RHOFD Length = 380 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 29/289 (10%) Query: 102 LKTDAVLAGMWVGVMGVNVLPSTAMLMIM------CLN-----LMGAGGPRLFVAGLVLM 150 L T L +W V V PS M +++ CL+ L+ G F GL + Sbjct: 101 LITGLALVQLWFSV----VEPSYHMRLVLTTVATACLSGVHAWLVFRQGSITFSRGLAVG 156 Query: 151 VVSCLVTLELTGITVSFNSAPL----EWW--LSLPIIVIYPLLFGWVSYQTATKLAEHKR 204 V+ L ++ + SF SAP E++ +L + I F + + + L R Sbjct: 157 VLVFLFGAQVMRLVTSF-SAPFPLNAEFFDTSTLQLTYITSFAFSVLLFSISAVLMATDR 215 Query: 205 ---RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 L+ ++ D +T RRH + R+E + CRRH LLI+D+DHFK IND +GH Sbjct: 216 LRIELEHLANHDSLTNALTRRHMDDACRSELERCRRHGHSMALLIMDLDHFKEINDIYGH 275 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 GD+A++ ++ LRG D +GRFGG+EF ++ T + AI R+ G TL Sbjct: 276 QAGDQALINFVARVNALLRGPDQLGRFGGEEFVALLPETSLDEAIAVAERI-RGACTLA- 333 Query: 322 PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 P T +S+GV L AD ALY+AK AGRNR EVA Sbjct: 334 GQAPACT--VSIGVTTNRKDNDSVDTLLARADAALYRAKAAGRNRVEVA 380 >UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0Y0_9NEIS Length = 528 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 5/190 (2%) Query: 184 YPLLFGWVSYQT--ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 Y + W+ T +LAE +L ++ D +TG+ NRR E L + RR+ Sbjct: 326 YRMFTYWLDSSTRLVNELAEANSKLAHLARTDTLTGLPNRRALEEALEQQLQRSRRNGEQ 385 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 A+L+++DIDHFK +ND +GHD GD I AL + + T+R DV GR+GG+EF V+++ Sbjct: 386 ASLVLLDIDHFKVVNDRYGHDAGDAVIRALGKAMSETIRNVDVAGRWGGEEFLVVLANVD 445 Query: 302 AESAITAMLRVHEGLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 E A R+ + + + + V IS+GVAPL+ H WLK AD ALY+AK Sbjct: 446 EEGAAAFAERLRTRVESSTVAHGELHVRYTISLGVAPLS--TPHREAWLKRADEALYRAK 503 Query: 361 KAGRNRTEVA 370 GRNRT +A Sbjct: 504 LDGRNRTAIA 513 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 72/175 (41%), Positives = 102/175 (58%), Gaps = 4/175 (2%) Query: 199 LAEHKR---RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 + E KR L+ ++T D +TG++NRRH+ M R E D RRH R L++DIDHFK I Sbjct: 403 ITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLDIDHFKRI 462 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT GH VGD AI AL +R DV+GR GG+EFA++++ T + A+ R+ + Sbjct: 463 NDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALLVAERLRQA 522 Query: 316 LNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + +R+P V S+GVA + L AD+ALY AK++GRN+ V Sbjct: 523 VAAIRIPAELGTVAFTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRNKVAV 577 >UniRef50_B0SIV5 GGDEF domain receiver component of a two-component response regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SIV5_LEPBA Length = 298 Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 102/165 (61%), Gaps = 3/165 (1%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 +L+ + RD MTG+YNRR+ E + EF C+RH+ ++ +IDID FK+INDT+GH++G Sbjct: 131 QLRETAIRDVMTGLYNRRYMEERIEQEFQRCKRHDSLLSMAMIDIDKFKNINDTYGHEIG 190 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-N 323 D+ I L +L+ + R SD+I RFGG+EF ++ T A + RV E ++ L + + Sbjct: 191 DQVIKQLAHELKTSFRKSDIISRFGGEEFVILFPETGVVDATRILDRVRENVSKLEMKSD 250 Query: 324 TPQV-TLRISVGVAPLN-PQMSHYREWLKSADLALYKAKKAGRNR 366 T Q+ S GVA + + +E LK AD LY+AK +GRN+ Sbjct: 251 TDQIFHFTFSGGVAGGDLSDIQSNQELLKIADKNLYEAKSSGRNQ 295 >UniRef50_B8FCK6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCK6_DESAA Length = 301 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 63/170 (37%), Positives = 105/170 (61%), Gaps = 2/170 (1%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L E R+LQ ++ RDG+TG+YN R+++ + +F R++ + ++ DID FK NDT Sbjct: 128 LQETNRQLQELANRDGLTGLYNHRYFQDAMTKDFQRAMRYHESLSCVLCDIDFFKKFNDT 187 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 +GH GD + L R ++ +LR +D+ R+GG+EFA+++ TPA +A R+ E + Sbjct: 188 YGHQTGDIVLSTLARIVEDSLRDTDLAARYGGEEFALVLYHTPAAAAFMVAERLRESVEQ 247 Query: 319 LR-LPNTPQVTLRISVGVAPL-NPQMSHYREWLKSADLALYKAKKAGRNR 366 + N +++ ISVGVA +P + ++ ++ AD ALYKAK+ GRN+ Sbjct: 248 HEFIANDLSLSVTISVGVATYPHPDIPDHKTLIECADKALYKAKENGRNQ 297 >UniRef50_Q2SHG3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHG3_HAHCH Length = 555 Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 104/175 (59%), Gaps = 1/175 (0%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 ++ +L + L+ ++ RD +TG+YNRR ++ L EF+ +R+ TL+++DIDHF Sbjct: 363 FERTKELDKENLELREIAARDSLTGLYNRRFFQNRLNYEFNRAKRYGSGLTLVLLDIDHF 422 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 K INDT GH GDE ++ L+ L +LR SD+I R GG+EF +I+ E T + R+ Sbjct: 423 KIINDTKGHPAGDEVLIRLSSFLSQSLRSSDLIARIGGEEFCIILPEHLDEGVKTFIDRL 482 Query: 313 HEGLNTLRLPNTPQV-TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 ++ L + + + S GVA + SH ++ LK AD ALY+AK+ GRNR Sbjct: 483 RIEISLLDFQHEGEAFQVTCSFGVAEYRNESSHPKDILKKADEALYQAKRTGRNR 537 >UniRef50_Q0VQ38 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VQ38_ALCBS Length = 364 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/229 (32%), Positives = 108/229 (47%), Gaps = 24/229 (10%) Query: 165 VSFNSAPLEWWLSLPIIVIYPLL----------FGWVSY-------------QTATKLAE 201 + F S + W P I+ L GW Y + +L E Sbjct: 136 LCFTSLLIYEWFEAPQQAIFSYLVGHWLILALGLGWFIYMGGYIHNLQSRVREQRRRLHE 195 Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 RL ++ RD +TG+YNRRH+ L E R N L IID+DHFK +NDT+GH Sbjct: 196 AHNRLSAIAVRDDLTGLYNRRHFLERLEEEMSRANRENNPLHLAIIDLDHFKQVNDTYGH 255 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 GD+ + + + LR SD++ R+GG+EF V+ T ++ AM R+ Sbjct: 256 HAGDDVLHRFAQLAAMGLRKSDLLARYGGEEFVVLFPHTSTQACQAAMERLRNRFAQQHY 315 Query: 322 PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + + S G+ P P S E++K AD ALY+AK GRNR ++A Sbjct: 316 SFSGDLRSKFSAGLTPYQPGESA-EEFIKRADRALYQAKDLGRNRIQLA 363 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 102/173 (58%), Gaps = 2/173 (1%) Query: 201 EH-KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 EH L+ S DG+TG+YNRR+W+ C R + +T L++DIDHFK INDT+ Sbjct: 152 EHLNEELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRREKPSTALMLDIDHFKRINDTY 211 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH GD+ I L ++ +R +D+ GR+GG+EFA+I++ + E A R+ + L Sbjct: 212 GHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSSVEDAKIVAERIRQLAQRL 271 Query: 320 RLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + + ++ +S+G+A +P WL+ AD ALY+AK+ GRN+ + A Sbjct: 272 VVEHEGESISFTVSLGLAQFSPDFKGAMAWLECADQALYEAKENGRNQYRIYA 324 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 127/225 (56%), Gaps = 9/225 (4%) Query: 147 LVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRL 206 L++++V V +L + + ++ + LS ++++ ++Y + L ++ Sbjct: 128 LIVVIVILAVLNKLNIVPIPYSPDEIRQALSAYVVIM------VLAYVFESALLSSYEKI 181 Query: 207 QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDE 266 + ++T D +TG +NR L E + +R+ +L++ DID+FKSINDT+GH++GD+ Sbjct: 182 KKLATTDPLTGAFNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHNIGDQ 241 Query: 267 AIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ 326 + ++ +R +D +GRFGG+EF +I G E A ++ + + +++ P+ Sbjct: 242 VLKITIDTIKNHIRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKDIKVEGIPE 301 Query: 327 VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 +T ISVGVA P S +++K AD+ALY AKK G+NR E+ + Sbjct: 302 IT--ISVGVAEYFPDES-ITDFIKKADIALYSAKKKGKNRVEIYS 343 >UniRef50_Q1IV91 Diguanylate cyclase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IV91_ACIBL Length = 453 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/192 (40%), Positives = 112/192 (58%), Gaps = 16/192 (8%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L E +L+ +STRDG+TG+YNRR ++T L E R N +LLIID+D FK Sbjct: 264 QREKELKEAVAKLEELSTRDGLTGLYNRRFFDTTLTAECKRAARANYPISLLIIDVDCFK 323 Query: 254 SINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 ++ND +GH VGD+ + + + L + R SDV+ R+GG+EFA+I+ T ESA T + Sbjct: 324 ALNDHYGHLVGDDCLQKVGKSLASAVRRTSDVVARYGGEEFALILPNTSEESATTIGENI 383 Query: 313 HEGLNTLRLPNT-----PQVTLRISVGVA---PLNPQMSH-----YREWLKSADLALYKA 359 + L + N P VTL SVGV P +P+ S E +++AD ALY+A Sbjct: 384 RRAVLGLEIANANSTAGPFVTL--SVGVCTRRPSHPRSSEDILVTTNEIIRAADEALYRA 441 Query: 360 KKAGRNRTEVAA 371 K+ GRNR + A Sbjct: 442 KREGRNRVLLGA 453 >UniRef50_Q31M78 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=3 Tax=Synechococcus elongatus RepID=Q31M78_SYNE7 Length = 1037 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 68/178 (38%), Positives = 108/178 (60%), Gaps = 8/178 (4%) Query: 196 ATKLAEHKR---RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL--LIIDID 250 +T + E K+ +LQ +T D +TG+ NRR + T+ + E + R RD +L +IIDID Sbjct: 848 STDITEQKKLEQKLQQQATTDALTGILNRRQFITLAQAELNRIYRIQRDTSLSLVIIDID 907 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFK+IND++GH VGD+ ++ T Q +R D+ R GGDEF +++ T + A M Sbjct: 908 HFKTINDSYGHTVGDQVLILWTNICQQNIREVDIFARLGGDEFVLMLPETNGKQAYQVMD 967 Query: 311 RVHEGL--NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R+ + + +L LP + + ISVG+A P++ ++L+ AD ALY+AK+ GR+R Sbjct: 968 RIRQLVIQQSLHLPQQA-IAITISVGIAVWTPEILTLDQFLERADRALYQAKQQGRDR 1024 >UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0SXM5_ACILW Length = 440 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 89/288 (30%), Positives = 142/288 (49%), Gaps = 40/288 (13%) Query: 107 VLAGMWVGVMGVNVLPSTAM------LMIMCLNLMGAGGPR------LFVAGLVLMVVSC 154 V A W+G++ +++ P A + I+ NL + + +A +++ VS Sbjct: 136 VAAAAWIGLLALSISPHVATYIYASAIFILIANLCVQTQFKVAVYCSILIALFIMLGVSQ 195 Query: 155 LVTLELTGI-TVSFNSAPLEWWLSLPI----------IVIYPLLFGWVSYQTATKLAEHK 203 ++ I +V F +PL W+ S+ I + LL W +YQT LA Sbjct: 196 FMSASQAFIFSVVF--SPL-WFFSIYINWNNILNVRRSFLRSLLDEW-NYQTLKNLAH-- 249 Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 D +T +YNRRH+ M +H + LL+ D+DHFK+IND++GHDV Sbjct: 250 --------TDDLTQLYNRRHFVDMAERSIHQWPKH-ASSCLLMFDVDHFKNINDSYGHDV 300 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 GD + + + +R SDV+ RFGG+EF ++ T + ++ R+ + + Sbjct: 301 GDRVLQLIAEVTRKEMRHSDVLARFGGEEFIALLEDTQLQDSLVIAERIRCAIQKQYIYV 360 Query: 324 TPQVTLR--ISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 P T+R IS+GVA L + +K AD+ALY+AKK+GRNR EV Sbjct: 361 EPNHTIRFTISIGVAELESHTQPLEDLIKQADIALYQAKKSGRNRIEV 408 >UniRef50_A6Q482 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q482_NITSB Length = 458 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 100/161 (62%), Gaps = 4/161 (2%) Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 DG+T +YNR + + + +EF+ +R+N ++++ID+D FK IND++GH+VGD + A Sbjct: 298 DGLTKLYNRYYLDKFIESEFEKAKRYNYPLSVVMIDLDFFKRINDSYGHEVGDMVLKAFA 357 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN---TLRLPNTPQVTL 329 L+ +R SDV+ R+GGDE ++M T A M R+ L+ TL+ + ++T Sbjct: 358 EFLKKNVRKSDVVFRYGGDELLIVMPFTDLHQARDVMERIRNLLHQKGTLQFGDI-KITY 416 Query: 330 RISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 S G+A ++ + +E +K AD ALYKAKK GR+R E+A Sbjct: 417 TFSAGIATIDENIKDAKELIKKADEALYKAKKLGRDRIELA 457 >UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R75_RHOFD Length = 498 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 88/324 (27%), Positives = 158/324 (48%), Gaps = 34/324 (10%) Query: 80 WPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGG 139 +PH+ + A+RA D + E+ NL D+ L G+++ + + S A +M N G Sbjct: 29 YPHVQYWRAARAADSVKTELDNLLIDSFLLGLFMAALEFPLWLSFAAIMATLTNNAANKG 88 Query: 140 PRLFVAGLVLMVVSCLVTLELTGITVSFNSA-PLEWWLSLPIIVIYPLLFGWVSYQTATK 198 ++ M+ L+ + + G S ++ PL + + I Y L+ G V +Q + Sbjct: 89 WPSVPKNVLAMLAGALIWVTVRGFKFSPDTGWPLTIFCMVGICG-YVLVIGNVGFQRNLQ 147 Query: 199 L----------------------------AEHKRRLQVMSTRDGMTGVYNRRHWETMLRN 230 L +++L+ ++RD +T +YNRR+ +T L Sbjct: 148 LRRVREELRTREQELLKANQSLVVNLQEIEALQQQLREQASRDSLTALYNRRYLDTTLDR 207 Query: 231 EFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFG 289 E +C+R + +L++ID+D FK ND GH GD+ ++A+ + LQ + R SD+ R+G Sbjct: 208 ELASCKREGKPLSLIMIDVDDFKKYNDLHGHQAGDQCLIAVAKTLQASAKRASDLAARYG 267 Query: 290 GDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV--TLRISVGVAPL-NPQMSHYR 346 G+EF +++ G A +A + + L++P+ ++ IS+G+A + N Sbjct: 268 GEEFLLVLPGMDATAAQGLAEELRRSVEALKIPHEQSRGGSVTISIGLAVMTNDSHKDVA 327 Query: 347 EWLKSADLALYKAKKAGRNRTEVA 370 L++AD ALY AK GRN+ +A Sbjct: 328 GLLRAADEALYHAKHGGRNQVRLA 351 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 3/176 (1%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 Y T + + L+ ++T DGMTG++NRRH+ T+ E+ RR+ R + L+IDIDHF Sbjct: 148 YSDVTDIVRNAEELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMIDIDHF 207 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT--PAESAITAML 310 KSIND +GH VGD+ IV L + + R DV+ R GG+EFA+++ T P A+ L Sbjct: 208 KSINDDFGHQVGDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAVAERL 267 Query: 311 RVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R ++L L + V +S+G A + + +++AD ALY+AK GRNR Sbjct: 268 RGEVAASSL-LMASGSVRATVSIGAATSAATIDGISDLMRAADRALYEAKHGGRNR 322 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 110/183 (60%), Gaps = 3/183 (1%) Query: 190 WV--SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 WV +++ T+ E + +L+ ++T D +TG+ NRR + + + RR+ RD +LL++ Sbjct: 587 WVVGTFRDVTERKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDLSLLMM 646 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DID+FK++ND +GHD GD+ + L++ LR DV GR GG+EF++++ T + A Sbjct: 647 DIDYFKTVNDMYGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGLDGATL 706 Query: 308 AMLRVHEGLNTLRL-PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R+ + T ++ + + + +S+GVA + + LK+AD+ LY AK+AGRN+ Sbjct: 707 VAERLRAEIETTKMNTRSGSLNITVSIGVATYSEHTKTLEQLLKAADIGLYAAKEAGRNQ 766 Query: 367 TEV 369 +V Sbjct: 767 VKV 769 >UniRef50_Q2VZ27 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VZ27_MAGSA Length = 355 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 2/169 (1%) Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 + H L+ +++RD +T NRRH+E + E D+ RR R LL +DIDHFK INDTW Sbjct: 182 SRHMAELEELASRDSLTQTANRRHFEHLAGLELDHARRMGRSFALLALDIDHFKRINDTW 241 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH GDEA+ A +++LR D++GR GG+EFAV + T + A R+ + L Sbjct: 242 GHAAGDEALKAFANACRLSLREYDILGRIGGEEFAVALPNTGPDGARVIAERLRAAVEEL 301 Query: 320 --RLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R L +S+G+A L L+ AD ALY+AK +GRNR Sbjct: 302 VVRPAKGELFDLTVSIGIAQLREGDLTVETMLERADQALYRAKNSGRNR 350 >UniRef50_A6FD11 Sensory box/GGDEF family protein n=1 Tax=Moritella sp. PE36 RepID=A6FD11_9GAMM Length = 320 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 102/173 (58%), Gaps = 1/173 (0%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L + L +S D +T + NR W ++ +EF +R+ + +T +++DIDHFK++ND Sbjct: 143 QLDKANAELARLSQTDALTQLNNRHRWNNLIDSEFKRVKRYEQISTFMMLDIDHFKNVND 202 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL- 316 T+GH GD+ I ++R ++ +R +D R+GGDEFA+ ++ T A +AI R+ + + Sbjct: 203 TYGHVAGDKVIAEVSRVIRENVRETDFSARYGGDEFAICLTNTTAHNAIILADRLRQAIE 262 Query: 317 NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 NT+ + + + IS+G+A W K+AD ALYK K+ GRN+ + Sbjct: 263 NTVITDDDNNIKVTISIGMAEFTENTDTVDTWTKNADCALYKGKENGRNQYSI 315 >UniRef50_D0I9J2 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I9J2_VIBHO Length = 498 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 112/215 (52%), Gaps = 16/215 (7%) Query: 159 ELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHK---RRLQVMSTRDGM 215 E+ G+T S PL +S F + +Q + + +RL+ S D + Sbjct: 283 EIKGVTKSGKRVPLSIAISS---------FSFEEHQGSIAIIRDITDFKRLESDSMHDAL 333 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQL 275 TGVYNRRH E +E +R+ R +LL++D+D+FK++NDT GH GD+ +V L Sbjct: 334 TGVYNRRHIEERFEDEVKRAKRYARALSLLVVDLDNFKNLNDTEGHRAGDKGLVVAAEHL 393 Query: 276 QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGV 335 + LR D IGR+GGDEF VI AI R+ + P ++T+ S+GV Sbjct: 394 RSQLRKHDHIGRWGGDEFVVICPELDRADAIEIAERIRRRFEAQQFPWCHKMTM--SIGV 451 Query: 336 APLNPQMSHY--REWLKSADLALYKAKKAGRNRTE 368 A L+P S R+ + AD ALY AK+ GRNR E Sbjct: 452 ASLSPDTSVMTPRDLFEEADQALYLAKERGRNRVE 486 >UniRef50_B6BJ77 Signal transduction response regulator-chey like receiver and ggdef domain n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJ77_9PROT Length = 534 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 64/175 (36%), Positives = 109/175 (62%), Gaps = 5/175 (2%) Query: 192 SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 SYQ+ KL R L + D +T ++NR+ ET+L E +R+N + +L+I DID+ Sbjct: 358 SYQS--KLEIKNRTLLKLVNVDHLTKIHNRKSIETILIKELKRAKRYNHELSLIIFDIDN 415 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 FK+INDT+GH++GD+ + ++ + + ++R SD GR+GG+EF VI + T ++A+ + Sbjct: 416 FKNINDTYGHNIGDKVLKSIAKVVANSIRESDYFGRWGGEEFIVISTETSMDNALLVAEK 475 Query: 312 VHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + E ++T ++T S+GVA + +H + + +AD ALYKAK +G+NR Sbjct: 476 IRESISTYDFEEAEKITC--SIGVAEYTSEDTH-QSIVHNADTALYKAKHSGKNR 527 >UniRef50_Q1NDY2 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NDY2_9SPHN Length = 364 Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 78/233 (33%), Positives = 117/233 (50%), Gaps = 7/233 (3%) Query: 141 RLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWW---LSLPIIVIYPLLFGWVSYQTAT 197 + F A L+L + C + L ++ + S + + LSL + IY G Sbjct: 133 KAFFAFLILFAL-CQLALAVSATFIRSASEGKDLYRNILSLGMPTIY---VGTAVSAVLV 188 Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 + ++L+ D +T V NRR E RRH R +L+I D+D FK++ND Sbjct: 189 VAGDLAQQLRSQMRHDPLTEVLNRRGLEEAASQAIAQARRHGRPLSLVICDLDGFKALND 248 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 GH GD A+ + L + +R D++GR GGDEF +++ + A++A M RV + Sbjct: 249 NHGHIAGDHALKGFAQLLILAVRRGDIVGRMGGDEFGLLLQDSDAQAAADVMERVRLEVA 308 Query: 318 TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L LP P+ TLR S GVA L P+ + + AD ALY AKK G+NR +A Sbjct: 309 HLSLPKVPESTLRASFGVAALLPEDLTLEDMVHRADEALYSAKKLGKNRVSIA 361 >UniRef50_Q21HV6 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q21HV6_SACD2 Length = 301 Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 108/200 (54%), Gaps = 9/200 (4%) Query: 175 WLSLPIIVIYPLLFGWVS-----YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLR 229 ++S PI YP+L + Q L + + L+ ++TRD +TG+ NRR + + Sbjct: 101 FVSKPIE--YPVLAARMRSALRLIQAKRDLEKANKELERLATRDPLTGINNRRSFFKLAE 158 Query: 230 NEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFG 289 E RH RD LL++D DHFK INDT+GH GDEA++ +T Q R SD++ R G Sbjct: 159 AELTKTIRHGRDIALLMLDADHFKMINDTYGHAAGDEALLTITEICQNACRESDILARLG 218 Query: 290 GDEFAVIMSGTPAESAITAMLRVHEGL-NTLRLPNTPQVTLRISVGVAPLNP-QMSHYRE 347 G+EFA+ T E A R+ + NT+ N+ + +S+G+ P Q E Sbjct: 219 GEEFAICCPDTNLEGAYAVAERIRQQCENTVIEHNSASFGITLSIGITTFVPSQDKSITE 278 Query: 348 WLKSADLALYKAKKAGRNRT 367 L+ AD LY+AK+ GRNR+ Sbjct: 279 MLQRADNLLYQAKEMGRNRS 298 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 69/174 (39%), Positives = 98/174 (56%), Gaps = 4/174 (2%) Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 ++ RL+ + D +TG+YNRR++E L+ E RRH L++D DHFK INDTWGH Sbjct: 172 NRERLKWLGLTDPLTGLYNRRYFEQRLQEEAQRTRRHGDPLACLMLDADHFKRINDTWGH 231 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 GD + L R+++ LRG DV R GG+EFAV++ TP R+ + + Sbjct: 232 QAGDVVLKVLARRVRQQLRGCDVAARIGGEEFAVLLPSTPVRHVQLVAERIRLAIAGEPV 291 Query: 322 PNTPQVTLRISV--GVAPLNPQMSHY--REWLKSADLALYKAKKAGRNRTEVAA 371 +P L++SV G A L P + + AD ALY+AK+ GRNRT +AA Sbjct: 292 HVSPDCVLQVSVSLGAAMLAPGAADISPERLMARADAALYQAKRNGRNRTMLAA 345 >UniRef50_Q1ZGI0 Sensory box/GGDEF family protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGI0_9GAMM Length = 325 Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 1/168 (0%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L E ++L+ S D +T ++N W+ + E+ R ++ +LL+IDIDHFK+INDT Sbjct: 144 LHEAHKKLEHDSHTDSLTQLHNHGFWKECCQQEYKRYIRTQQNVSLLMIDIDHFKNINDT 203 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 +GH GD+ + + + +Q +R D+ GR+GG+EF+V++ + E A R+ + + Sbjct: 204 YGHPFGDKVLQDVAQAIQQQMRSIDIAGRYGGEEFSVLLIDSDLEQAKVVAKRISDVIKA 263 Query: 319 LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 L + ++ L IS+G+A LN ++ Y++W+ AD LY AK AGR++ Sbjct: 264 LSFKD-KEIELTISIGIASLNKKIESYQQWINIADKGLYIAKNAGRDQ 310 >UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8J1_ALHEH Length = 689 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/174 (40%), Positives = 103/174 (59%), Gaps = 3/174 (1%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 +L E RRL+ +T D +TGV+NR + + E R+ +LL+ DIDHFK++N Sbjct: 518 AQLTEANRRLKRQATTDSLTGVWNRYRMQEQIELERGAHERYGTPCSLLLFDIDHFKAVN 577 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 D +GH+ GD+ +VAL R + LR +D +GR+GG+EF V+ + + E A T R+ + + Sbjct: 578 DQYGHEAGDQVLVALARAVVGELRATDFLGRWGGEEFIVLATNSAPEEAWTLAERLRQCI 637 Query: 317 NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 LR P VT ISVGVA L+ + + AD A+Y+AK+ GRNR E A Sbjct: 638 AGLRFPGVGPVT--ISVGVASLS-RGDTVDRLIDRADRAMYRAKQRGRNRVEQA 688 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/174 (41%), Positives = 103/174 (59%), Gaps = 3/174 (1%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 + T+ E + L+ + D +T NR ++ET+L E +R+ +LL++DIDHF Sbjct: 615 FHDITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLLLDIDHF 674 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 K INDT+GH+VGDE + L L+ LR +DV+GR+GG+EF V++ GT AE ++ Sbjct: 675 KRINDTFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERGQHVAEQL 734 Query: 313 HEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 E + P VT IS+GVA P S R+W+K AD A+Y AKK GRNR Sbjct: 735 REQVTATAFPCVGLVT--ISLGVAECRPGES-IRDWVKRADEAMYVAKKGGRNR 785 >UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087A8_SHEFN Length = 321 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 3/185 (1%) Query: 187 LFGWVSYQTATKLAEHKR-RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 L G + T A H R +L+ ++ D +TG++NRR + + +EF R+ + +L+ Sbjct: 139 LIGLIGISTDITAAYHLRSKLERLANTDPLTGLFNRRSFTSFCEHEFFRATRYFQPFSLM 198 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA 305 IIDID FK +NDT+GH VGDE I + +R +DV+ R GG+EFA+++ T +SA Sbjct: 199 IIDIDLFKKVNDTYGHLVGDEVIKRVANICNEHVREADVLARIGGEEFAILLPDTDIDSA 258 Query: 306 ITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 R+ E TP +T IS+GVA L Q + E K AD ALY +K GRN Sbjct: 259 YVLAERLREAQQQYEEQKTPSIT--ISIGVATLRSQDKAFLEIFKRADKALYSSKNVGRN 316 Query: 366 RTEVA 370 VA Sbjct: 317 SVNVA 321 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 101/172 (58%), Gaps = 2/172 (1%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 T+ +K +L+ + D +TGVYNR ++ L E +R+ ++ +DIDHFK IN Sbjct: 444 TEEEHYKSQLEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFSMAFMDIDHFKMIN 503 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 DT+GHDVGD +V+L + + LR +DV R GG+EF ++M T E+A+ R+ + Sbjct: 504 DTYGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPETSLENALIISERIRSTV 563 Query: 317 NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + P+ + IS+G+ LN + + + K AD ALYKAK+ GRNR E Sbjct: 564 EGISSKDVPE-KITISMGLVELNS-WDNVQSFYKRADEALYKAKENGRNRIE 613 >UniRef50_Q2SPL7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL7_HAHCH Length = 405 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 88/279 (31%), Positives = 147/279 (52%), Gaps = 28/279 (10%) Query: 109 AGMWVGVMGVNVLPST-----AMLMIMCLNLMGAGGPRLFVAG-LVLMVVSCLVTLELTG 162 A +W GV ++VLP+ + + L L G L + G +V + + CL+ Sbjct: 111 ASLWGGVAALSVLPTPFAPHFPLFLTCTLGLCAGGAASLAILGRMVNLFIICLLAPMTLA 170 Query: 163 ITVSFNSAPLEWWLSLPIIVIYPLLFGWVS------YQTAT----KLAEHKRRLQVMSTR 212 + ++++ P +++ + L W+S Y+ A KL++ L ++ + Sbjct: 171 LFSAYSTQPGVIGF---LLISFGLGMSWISTLPRHEYEVAVLSIIKLSQQANYLTELTIQ 227 Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIV--- 269 DG+TGV NRR+++ +L + R N +LL+IDIDHFK +ND +GH +GDE +V Sbjct: 228 DGLTGVKNRRYFDQILSADLRRASRLNYPISLLLIDIDHFKRVNDRYGHLIGDECLVQTA 287 Query: 270 -ALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN-TPQV 327 L RQLQ R SDV+ R+GG+EF +I+ G AE A ++ + + N + V Sbjct: 288 QTLMRQLQ---RNSDVLARYGGEEFGIILPGVDAEEAAALAEKLRSAVAACAVWNLSDPV 344 Query: 328 TLRISV-GVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 ++ IS+ GV+ + + ++ L+ AD ALY+AK GRN Sbjct: 345 SVTISIGGVSGVPKETMTPKQLLELADKALYQAKSYGRN 383 >UniRef50_A0L7Q0 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7Q0_MAGSM Length = 555 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 101/168 (60%), Gaps = 2/168 (1%) Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 AE R L+ + RD +TG+YN + L +E + R N +ID+D+FK +NDT+ Sbjct: 383 AERMRTLRSLMIRDSLTGLYNHTTTKHFLDSEIASASRRNSTTCFAMIDLDYFKKVNDTY 442 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH +GD+ +VAL+R LQ +R SDV+GR+GG+EFAV+++ E A + ++ E + Sbjct: 443 GHAMGDQVLVALSRLLQQRVRQSDVVGRYGGEEFAVVLTDIDLERAKAILDQLREDFARV 502 Query: 320 R-LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + N + T S GVA P++ E ++AD ALY+AK+ GRN+ Sbjct: 503 KFFANGIEFTCSFSCGVAAF-PRLETALEIGEAADKALYQAKREGRNQ 549 >UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489Q4_COLP3 Length = 451 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 107/183 (58%), Gaps = 4/183 (2%) Query: 185 PLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 P L G+ + T+L + K ++++ D +T +YNRR + E+ +R++ TL Sbjct: 266 PALIGFST--DVTELFKLKEEFKLLANTDPLTNLYNRRFFIEQAEKEYQRAKRYSLSMTL 323 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 + IDIDHFKSIND +GH GD+ ++ + +QL+ +LR +D++ R GG+EF++++ T A S Sbjct: 324 ISIDIDHFKSINDQFGHPAGDQVLIEIAKQLKASLRQTDILARIGGEEFSILLPETSAMS 383 Query: 305 AITAMLRVHEGLNTLRLPNT--PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 A+T R+ E + L + ++ L +S+GV+ L + AD ALY+AK Sbjct: 384 AMTFAERIKEEQSRLIITGDWQGEINLSVSIGVSSLIASDKAFDVLFSRADKALYQAKNT 443 Query: 363 GRN 365 GRN Sbjct: 444 GRN 446 >UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKN6_DESMR Length = 629 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 94/324 (29%), Positives = 152/324 (46%), Gaps = 29/324 (8%) Query: 69 WWLVLVGWAFV------WPH------LAWQIASRAV----DPLSREIYNLKTDAVLAGMW 112 W L L G+A + W + + ++A+R + + +R ++ + TD ++A Sbjct: 289 WALKLTGFALLIFGIIFWKNRNLKREVEEKVAARELLKQANNYNRSLFEINTDPIMAIDR 348 Query: 113 VGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFV------AGLVLMVVSCLVT---LELTGI 163 GV+ + + + L+G LF GL ++ + LE T I Sbjct: 349 EGVITDANKSTETITGLSRTELIGRKFSSLFTNDQKADQGLQDTLLYSSIKNHELEFTNI 408 Query: 164 TVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRH 223 A + + I +F T K+ E RL+ M+T D +TG+ NR+H Sbjct: 409 NGKNTHAIFNFSVFKDETGISTGIFAAARDITERKIMEE--RLKEMATTDSLTGLNNRQH 466 Query: 224 WETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSD 283 + F+ +RH + ++ + DIDHFK +NDTWGH+ GD + L++ R SD Sbjct: 467 FLEHSSILFEMAKRHKANLSIALFDIDHFKQVNDTWGHEAGDLVLRELSKLALNCFRSSD 526 Query: 284 VIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQM 342 +IGR GG+EFAVIM T E AI A R + + + R +++ +S+G+A NP Sbjct: 527 IIGRIGGEEFAVIMPETDKEEAILASERFRKIVESTRFEYENDLLSITVSIGIAQFNPNT 586 Query: 343 -SHYREWLKSADLALYKAKKAGRN 365 + + K +D ALY AK GRN Sbjct: 587 NTTINDLTKISDDALYTAKANGRN 610 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/174 (39%), Positives = 108/174 (62%), Gaps = 2/174 (1%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 T+ E + +L+ M+T D MT + NRR++ ++++E + R++R +L++ D+D FK++N Sbjct: 658 TESREKENQLRRMATTDDMTKLNNRRYFIELVKSEIERSIRYSRPLSLVMFDVDKFKAVN 717 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA--ITAMLRVHE 314 DT+GHDVGD + A+ + LR D+IGR GG+EFAV + T + A + LRV Sbjct: 718 DTYGHDVGDMVLKAIAATAKGVLRDVDIIGRLGGEEFAVGLPETDLKGAMLLAERLRVVL 777 Query: 315 GLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 ++ LP+ V +S+GVA L+ ++ LK ADLALY AK+ GRNR E Sbjct: 778 EEASVELPDGGIVDFTVSLGVAVLDRSITDVDVLLKHADLALYAAKENGRNRVE 831 >UniRef50_C7RTE2 Diguanylate cyclase with hemerythrin-like metal-binding domain protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RTE2_9PROT Length = 483 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/177 (37%), Positives = 105/177 (59%), Gaps = 3/177 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L + L+ ++ D +TG +NRR E +R+E D R+++ +LL++DIDHFK Sbjct: 149 QANQELQQTVVELEQVAGTDKLTGAWNRRRIEECVRSEMDRLNRYDQPLSLLVVDIDHFK 208 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +IND GH GD+ + A+T LQ LRG+D + R+GG+EF V+ T +A R+ Sbjct: 209 AINDQHGHGAGDQVLQAVTALLQSRLRGTDALARWGGEEFVVVCPNTGRSTAALLAERLR 268 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + P Q+T +S+G A +P + + EW + AD ALY+AK GRN+ ++A Sbjct: 269 GQIASADFPLIGQLT--VSIGAAECSPGDT-WEEWFQRADEALYRAKTGGRNQVQIA 322 >UniRef50_B4U722 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U722_HYDS0 Length = 640 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 117/199 (58%), Gaps = 7/199 (3%) Query: 173 EWWLSLPIIVIYPLLFGWVSYQTATKLAEHK---RRLQVMSTRDGMTGVYNRRHWETMLR 229 E ++ + ++ P + G++ A + E K +L+ S +D +TG YNRR+ E + Sbjct: 430 EHYMKDFVNMMIPYIKGYLD--EAIPVMESKLLMEKLKEQSIKDQLTGFYNRRYIEEAID 487 Query: 230 NEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFG 289 +N +R +L+ID+DHFK IND +GHDVGD + + + ++ ++R SD+ RFG Sbjct: 488 PILNNAKRKGETTGVLMIDVDHFKEINDKYGHDVGDMVLKTVAQTIKESIRESDIPIRFG 547 Query: 290 GDEFAVIMSGT-PAES-AITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYRE 347 G+EF V+++ P +S ++ +R + ++LPN + IS+GV+ + + + Sbjct: 548 GEEFMVLLTNVKPGDSESVAEKIRKNMENRVIKLPNNTTIKRTISIGVSEIPTDTDKFWQ 607 Query: 348 WLKSADLALYKAKKAGRNR 366 +K AD+ALYKAK++GRN+ Sbjct: 608 AVKFADVALYKAKESGRNK 626 >UniRef50_B9QXS2 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXS2_9RHOB Length = 543 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 13/211 (6%) Query: 171 PLEWWLSLPIIVIYPLLFGWVSYQTATK---------LAEHKRRLQVMSTRDGMTGVYNR 221 PL + + + + ++ L+ ++ ++ +K L + R+L ++ +D +TG+ NR Sbjct: 317 PLLYLIPISLTSVFALVLVFMFFEERSKVRLKLAHGKLEQANRQLDALARQDALTGLANR 376 Query: 222 RHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG 281 R + L + RH A+ L++D+D FK INDT GH GDE + A Q T+R Sbjct: 377 RAFFDRLDQLLNELDRHPHPASFLMLDLDKFKIINDTRGHAAGDEVLKAFASLCQETVRK 436 Query: 282 SDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT---PQVTLRISVGVAPL 338 DV+GR GG+EFA+++ T AE A R+ + +R T +T +S+G++ + Sbjct: 437 VDVVGRIGGEEFAILLPHTSAEDATVFAERLRTAVAAIRFSETGPLSGLTFTVSIGLSAI 496 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + ++ R WL AD ALY++K +GRNR V Sbjct: 497 SERIDA-RTWLSQADKALYQSKASGRNRVTV 526 >UniRef50_Q1D1X1 FHA/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D1X1_MYXXD Length = 307 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 10/215 (4%) Query: 160 LTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVY 219 L G+ V N+APL + I L F S Q A + +++R + +TRDG+T VY Sbjct: 96 LNGLKV--NAAPLYDGDKIQIGSNTVLKF---SIQDALE-EQYQRSIYESATRDGLTRVY 149 Query: 220 NRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL 279 N++++ +R EF C RH +L++ D+DHFK IND +GH GD + + +++ T+ Sbjct: 150 NKKYFLETVRKEFSYCLRHRVPLSLVLFDVDHFKKINDAYGHPAGDYVLTRIAQRVSDTV 209 Query: 280 RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT--LRLPNTPQVTLRISVGVAP 337 R D++ R+GG+EFA+++ + + A+ R ++ TP + + IS+GVA Sbjct: 210 RTEDLLARYGGEEFALMLRESAEDQALACAERCRYAVDKADFVFSGTP-IKVTISLGVAT 268 Query: 338 -LNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 L+ S + + +AD LY+AK+AGRNR + A Sbjct: 269 LLDSDFSQPEDLIAAADKYLYRAKRAGRNRVDAKA 303 >UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clostridium thermocellum RepID=A3DEY5_CLOTH Length = 550 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 102/171 (59%), Gaps = 1/171 (0%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 A + E +R+ M+T D +TG+YNR +++ LR EF N ++ N D +L I+DIDHFK Sbjct: 374 AMENVELYQRMHEMATIDSLTGIYNRLYFQERLREEFANAKKENYDLSLAIMDIDHFKRF 433 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH GD+ + + ++ +LR D+I R+GG+EF +++ T + A + R+ Sbjct: 434 NDTFGHLFGDKVLKHIAHLMKKSLRSGDIIARYGGEEFVILLPRTSVKEAYDKVERLRNI 493 Query: 316 LNTLRLPNT-PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 + + + + ++ +S GV+ + E LK+AD ALY AK++GRN Sbjct: 494 VAKTTIKDELVEASVTVSFGVSSYPEFANTESELLKTADNALYDAKESGRN 544 >UniRef50_A3UJW0 Stalked-cell differentiation controlling protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UJW0_9RHOB Length = 450 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 87/228 (38%), Positives = 120/228 (52%), Gaps = 29/228 (12%) Query: 160 LTGITVSFNSAPLEWWLSLPI--IVIYPLLFGWVSYQTATKLAEHK------RRLQV--- 208 L G+ + + L L + ++ PL G +S ++AT+L + RL Sbjct: 222 LLGVVDEMDKRTMVRALDLGVNDVISRPLDPGELSARSATQLKRKRYADALRDRLDESLE 281 Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 MS RD +TG++NRR+ + LR D R ++ T +IDIDHFK INDTWGH+ GD+ + Sbjct: 282 MSVRDALTGLFNRRYTVSRLRQALDGLRANHEPLTTALIDIDHFKRINDTWGHNAGDQVL 341 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT 328 + +L LR D+ GR+GG+EF V+ S T A A AM R L + TP VT Sbjct: 342 KEICARLNEQLRAIDIAGRYGGEEFLVVFSNTTAREACDAMERAR-----LAVCATP-VT 395 Query: 329 LR---------ISVGVAPLNPQMSHYREWL-KSADLALYKAKKAGRNR 366 LR +SVGVA M E L + AD ALY AK++GRNR Sbjct: 396 LRETGDIINVTMSVGVA--EAFMDDSVEALIERADTALYDAKRSGRNR 441 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 103/178 (57%), Gaps = 2/178 (1%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 +++ Q T ++ +L M+ DG+TGV+NRR+ +T L+ E + RRH +++++DI Sbjct: 119 YITVQDVTDFVIYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIMMLDI 178 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 DHFK INDT GH GD + ++ L +R SD++GR+GG+EF I+ T E A+ Sbjct: 179 DHFKEINDTHGHICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQALVLA 238 Query: 310 LRVHEGLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R + + T Q + +S+GV L+ + +K AD ALY+AK+ GRNR Sbjct: 239 ERCRTQVAASQFSCTDHQSRVTVSIGVTDLHRDDT-LDSIIKRADDALYQAKRTGRNR 295 >UniRef50_Q2W2W5 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W2W5_MAGSA Length = 562 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 3/173 (1%) Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 AE R L+ + RDG+TG++N L RR N + +ID+D FKS+NDT+ Sbjct: 387 AERMRTLRSLMVRDGLTGLFNHTFIVQYLDTALAAARRENGKLCVAMIDVDLFKSVNDTY 446 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH GD+ +VAL R LQ LR +D+IGR+GG+EF V+M + +T M + E L Sbjct: 447 GHPTGDQVLVALARLLQQRLRTNDLIGRYGGEEFVVVMQNVSLKEGMTVMNGLREDFARL 506 Query: 320 RLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + Q + S G++ P+++ R +++AD ALY+AK+AGRNR E+A+ Sbjct: 507 KFQSGDQFFSCTFSGGISRF-PEIAGDR-LIEAADKALYEAKQAGRNRIELAS 557 >UniRef50_C6HZU4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZU4_9BACT Length = 811 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 98/167 (58%), Gaps = 3/167 (1%) Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 + + ++ ++RD +TG+YN+R + ++ E RH ++LLIID D+FK INDT+GH Sbjct: 381 YTQEIEYYASRDPLTGLYNQRIFWDLMNYETGRADRHGSPSSLLIIDCDNFKVINDTYGH 440 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR- 320 GD +V L R ++ R D+I R+GGDEFAVI+S SA R+HE + R Sbjct: 441 AAGDRVLVGLARIIEEACRTGDIICRYGGDEFAVIVSEADVNSAHALGDRIHEAVRRARF 500 Query: 321 -LPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 +P+ P TL +S+G+A H R+ AD +Y+AKK G++ Sbjct: 501 EIPDAPYPATLSVSIGIASYPRHAKHARDLFVVADHMMYRAKKMGKD 547 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 66/173 (38%), Positives = 108/173 (62%), Gaps = 2/173 (1%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 +AE + L+ ++ +D +T + NRR ++ L+ EF C R + +L IID+DHFKSIND Sbjct: 828 VAEKTKELKGLARQDSLTQLGNRRAFDEQLQYEFKRCERSEQPLSLAIIDVDHFKSINDR 887 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 + H +GD+ ++ L+ L LR D I R+GG+EFA++M T A+ A+ A R+ + + Sbjct: 888 FLHVIGDQVLIELSALLSNMLRDIDYIARWGGEEFALLMPETTAKEALQAAERIRQRIED 947 Query: 319 LRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + ++ + +S+GVA + ++ L +AD ALYKAK++GRNRTE+A Sbjct: 948 TSYQHLADELAVTVSIGVAS-SEHYPNHSALLVAADKALYKAKQSGRNRTELA 999 >UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales RepID=B4RZE8_ALTMD Length = 325 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 3/189 (1%) Query: 184 YPLLFGWVSYQTATKLA-EH-KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 + +L V+ Q KL EH + L+ S DG+TG++NRR+W+ + C R ++ Sbjct: 131 FCMLVYDVTEQALGKLGMEHLNQELKTASRVDGLTGLFNRRYWQERFDEMYKLCVRRDKP 190 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 +T +++DIDHFK INDT+GH GD+ I L ++ +R +D+ GR+GG+EFA+I++ + Sbjct: 191 STAVMLDIDHFKRINDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDST 250 Query: 302 AESAITAMLRVHEGLNTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 E A R+ + L + + + + +S+G+A WL+ AD ALY AK Sbjct: 251 VEDARIVAERIRQLAQRLVVEHEGESINFTVSLGLAQFCSAFKGPLAWLECADKALYDAK 310 Query: 361 KAGRNRTEV 369 ++GRN+ V Sbjct: 311 ESGRNQYRV 319 >UniRef50_Q3A271 Sensor histidine kinase/FOG: GGDEF domain protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A271_PELCD Length = 422 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 13/176 (7%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRR---HWETMLRNEFDNCRRHNRDATLLIIDID 250 +T K+AE+ RL D +TG+ NRR + +L N+ RH+ +++++DID Sbjct: 247 ETQKKIAENLARL------DPLTGLSNRRAFFEYGLLLENQ---IARHHHHFSIIMLDID 297 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFK IND +GH++GDEA+ L L +R SD++GR GG+EFA+IM +E A Sbjct: 298 HFKKINDCYGHEMGDEALKTLAEHLNAIVRSSDILGRLGGEEFAIIMPHASSEEAAIMSE 357 Query: 311 RVHEGLNTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 R+ ++ + L + Q + +S G+A N +++ +++ L +AD ALY+AK GRN Sbjct: 358 RLKTAISKIVLSDNEQRIRFTVSFGIAECNEKITSFQQVLNNADKALYQAKNEGRN 413 >UniRef50_A1STZ3 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STZ3_PSYIN Length = 305 Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 112/188 (59%), Gaps = 9/188 (4%) Query: 188 FGWVSYQTAT--KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 F +S++ T KLAE K + +S DG+TG+ NRR+++ L NE+ C R + TL Sbjct: 117 FFVISHKNITNRKLAEEK--VLHLSQIDGLTGIANRRYFDETLENEWKRCARSKQPLTLA 174 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQ-ITLRGSDVIGRFGGDEFAVIMSGTPAES 304 +ID+DHFK +NDT+GH GD ++V + L+ + R +D+ R+GG+EFA+IM T Sbjct: 175 MIDVDHFKLLNDTYGHQAGDNSLVMIGNLLKDLAQRPADLCCRYGGEEFAIIMPQTSNAQ 234 Query: 305 AITAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNP-QMSHYREWLKSADLALYKAK 360 A+ ++ + L +PN T L +S+G+A + P Q + R + AD +LY+AK Sbjct: 235 AVHIASKLITLIAALNIPNKKSPTKAILTVSIGLATVLPSQENDTRSLIAKADKSLYRAK 294 Query: 361 KAGRNRTE 368 K GRNR E Sbjct: 295 KKGRNRVE 302 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 97/161 (60%), Gaps = 1/161 (0%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ + RD +TG+YNRR+ E L+ E + +R R +++ID+DHFK++NDT+GHD GD Sbjct: 321 LKQQNIRDALTGLYNRRYLEESLKKELERAKRKERSLGIIMIDVDHFKNVNDTFGHDKGD 380 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP 325 + + L LQ +RGSD+ R+GG+E +I+ E+ ++ + + L L + Sbjct: 381 QVLKKLGGFLQRHIRGSDIACRYGGEELTLILPEASLENTRQRAEQLRQAVKNLDL-DLC 439 Query: 326 QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 TL ISVG+A + LK+AD ALY+AK+ GR+R Sbjct: 440 DHTLTISVGIACFPEHGYSGKALLKTADQALYQAKQQGRDR 480 >UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFS2_CARHZ Length = 543 Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 96/163 (58%), Gaps = 1/163 (0%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 RL+ ++ +D +TG+YNRR++ L E RRH + T++++DID+FK INDT+GHD G Sbjct: 374 RLKELAQKDELTGLYNRRYFLERLNEEHLRSRRHKLNYTIVLLDIDYFKKINDTYGHDCG 433 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 D + R L+ TLR +D+ R+GG+EF V++ T + A R+ E + L Sbjct: 434 DLVLNDFGRFLKDTLRRTDLSARYGGEEFVVLLPQTGKKEAYLLAERLREKVKERVLIFQ 493 Query: 325 PQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 Q V +S+G+A YRE L AD ALY+AK GR++ Sbjct: 494 GQKVKYTVSMGLAAYPEDAEEYRELLSLADKALYQAKNRGRDK 536 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 95/166 (57%), Gaps = 2/166 (1%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 +R L+ ++T D +TG +NRRH+ E + R+ TLL++D+D+FKSIND GH Sbjct: 404 ERELRRLATTDSLTGAFNRRHFLAAAGTELERANRYGNPLTLLMLDVDYFKSINDAHGHG 463 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR-- 320 GD+A+ L L+ LR DVIGR GG+EFAV++ T A+ R+ + LR Sbjct: 464 TGDDALRRLVEGLRHALRDIDVIGRLGGEEFAVLLPETGMAGALITAERLRAQVADLRLD 523 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 LP+ Q+ +S+G+A + L AD ALY+AK GRNR Sbjct: 524 LPDGGQLAFTVSIGIAAPRAEDGSVEAVLARADKALYRAKDEGRNR 569 >UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SB7_SULDN Length = 487 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 60/173 (34%), Positives = 95/173 (54%), Gaps = 3/173 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + L E ++L ++++D +T ++NRR + + E +R+N L++IDIDHFK Sbjct: 314 EKTKSLMEANQKLNNLASKDSLTNIFNRRIIDEFISKETIKSKRYNNSLALIMIDIDHFK 373 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +ND +GH VGDE I++L + +R SD+ GR+GG+EF +++ T A + Sbjct: 374 EVNDKYGHQVGDEVILSLVDIISKNIRESDIFGRWGGEEFIILLPETNLNQATIVAQNIR 433 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + + R Q T IS+GV+ N ++K D ALYKAK GRNR Sbjct: 434 KKVQEYRFDKVGQKT--ISLGVSEFNSN-DDSTVFIKRVDDALYKAKATGRNR 483 >UniRef50_Q084X5 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q084X5_SHEFN Length = 635 Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 63/170 (37%), Positives = 99/170 (58%), Gaps = 1/170 (0%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + +R+ + S D +TG+ NRRH + F ++HNR +++ DID+FK+IND +G Sbjct: 463 QSRRQFKRRSQTDYLTGIANRRHTFEQGKKRFYQAKKHNRSLAVIMFDIDNFKAINDHYG 522 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 HD+GD AI A R+ + L+ +D++GR GG+EF +I+ T A+ R+ + + + Sbjct: 523 HDIGDLAIKACGRRARNWLKKNDILGRIGGEEFLIILPDTEQAQAVEIAERLRTSIESNQ 582 Query: 321 LP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 N ++ ISV VA L PQ + +K ADL LY+AK GRN+ V Sbjct: 583 FVFNDVKMNFTISVSVAMLTPQTHELVDIIKQADLGLYQAKDNGRNQVVV 632 >UniRef50_Q1H221 Diguanylate cyclase (GGDEF domain) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H221_METFK Length = 394 Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 63/160 (39%), Positives = 89/160 (55%), Gaps = 3/160 (1%) Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 ++T D +T +YNRR + R E D R+ R ++ +ID+DHFK INDT+GHD GD+ + Sbjct: 223 LATHDELTKIYNRRALVNLGRREIDLAHRYKRPISIFMIDLDHFKLINDTYGHDAGDKVL 282 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT 328 ++ L T R +D+IGR+GG+E ++ T E A R+ E L LR P Sbjct: 283 RSVALTLSNTCRNTDIIGRYGGEELCIVCPHTTKEEATALGERLLEALRNLRHPACDNRH 342 Query: 329 LRISVGVAPLNPQMSHYREW---LKSADLALYKAKKAGRN 365 + S+G+ NP + W L AD ALY AK AGRN Sbjct: 343 VTCSIGLYTWNPHIDLAANWEAMLHRADTALYAAKAAGRN 382 >UniRef50_A2SJB4 Diguanylate cyclase n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJB4_METPP Length = 251 Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 3/162 (1%) Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 +S+RD +TG+ NRR ++ L E D R A +L++DIDHFK +NDT+GH GD + Sbjct: 56 LSSRDALTGLANRRQFDLALERETDRVARSGEAALVLLLDIDHFKRVNDTYGHAAGDMVL 115 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN--TLRLPNTPQ 326 A+ R LQ +R D + R+GG+EFA+++ P A A RV + T+ LP Sbjct: 116 QAVARTLQECVRPMDTVARYGGEEFAIVLPNCPPAFAQAAAERVRRAVEARTVPLPQGTM 175 Query: 327 VTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRT 367 +++ +S G A P S R W + AD LY+AK GRNRT Sbjct: 176 LSVTLSAGGAFAPPWVRSSARLWTERADAQLYRAKAEGRNRT 217 >UniRef50_A4G283 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G283_HERAR Length = 475 Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 103/168 (61%), Gaps = 4/168 (2%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 +R L+ + RD +TG +NRR+++ ++EF R ++ +DIDHFK +NDT+GH Sbjct: 301 QRELEEKTHRDVLTGAHNRRYFDEAFKHEFAVASRQGWPLSVAFLDIDHFKQVNDTYGHA 360 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT-LRL 321 GD+A++AL+R + +RGSD+ R+GG+EF ++ GT AE A+ + R+ + + + Sbjct: 361 AGDKALIALSRIIATQIRGSDIFVRYGGEEFVLLFPGTVAEEALIVLNRIRQAVASYCHT 420 Query: 322 PNTPQVTLRISVGVA-PLNPQMSHY--REWLKSADLALYKAKKAGRNR 366 +T L IS G+A ++ M H L++AD ALY AK+ GRN+ Sbjct: 421 YDTATFHLTISAGLAFHMDEDMKHETAEGLLRTADNALYTAKQNGRNQ 468 >UniRef50_C5S5K7 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K7_CHRVI Length = 433 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 116/216 (53%), Gaps = 14/216 (6%) Query: 165 VSFNSAPLEWWLSLPIIVIYPLL--------FGWVSYQTATKLAEHKRRLQVMSTRDGMT 216 +++ E+W+ L I+ PL F + + + AE + L+ ++T D +T Sbjct: 221 LNYTKGGQEYWVELKIV---PLRNARGEVTHFAAIEHDITVQKAE-ELVLRELATTDPLT 276 Query: 217 GVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ 276 GV NRR + + R ++ +L +IDID FK INDT GH VGD+A++ L L+ Sbjct: 277 GVLNRRGFSEQAQGRLAGALRDGQELSLAMIDIDFFKRINDTHGHAVGDQALIHLAGLLR 336 Query: 277 ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM--LRVHEGLNTLRLPNTPQVTLRISVG 334 + R SDVIGR GG+EFAV++ G E + M R+ L+L + + S+G Sbjct: 337 TSFRESDVIGRLGGEEFAVLLPGATLEQSHVLMDRFRMRLAATPLKLHDGRWLGFTASIG 396 Query: 335 VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 VA LNP+ + K+AD ALY AK +GRNR +A Sbjct: 397 VAELNPEKAGLAALTKAADSALYAAKHSGRNRVYLA 432 >UniRef50_A3JAH6 Putative uncharacterized protein n=2 Tax=Marinobacter RepID=A3JAH6_9ALTE Length = 776 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/174 (40%), Positives = 104/174 (59%), Gaps = 14/174 (8%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 LQ S D +TG++NRR ++ ++++E C R R TLLI D+DHFK ND +GH+VGD Sbjct: 607 LQRFSYEDALTGLHNRRFFDRLIKHELAVCLRSQRPLTLLIADVDHFKRFNDDYGHEVGD 666 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP 325 + + +L R SDV+ R+GG+EF +IM+G + A + E + +LRL + Sbjct: 667 LVLQRIASELAPAFRESDVVCRYGGEEFVIIMAGASSAQAKAKAKGLCERVQSLRLEHE- 725 Query: 326 QVTLR---ISVGVA-----PLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 V LR +SVGVA LNP+ + + AD ALY+AK+ GRNR EV++ Sbjct: 726 GVALRPLTMSVGVANWPDSTLNPE-----KLMGLADKALYRAKRNGRNRVEVSS 774 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/175 (40%), Positives = 101/175 (57%), Gaps = 2/175 (1%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 T+ E + RL+ ++T DG+TG+ NRR + L +E RR+ L+ ID+D FK +N Sbjct: 537 TEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDRFKRVN 596 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 DTWGH VGDE + AL + +R D +GR GG+EFAV++ T E A+ R+ G+ Sbjct: 597 DTWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAGV 656 Query: 317 NTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L T +T+ +S+GV+ +P L+ AD ALY+AK GRNR E A Sbjct: 657 EAAPLLTTAGPLTVTLSLGVS-ASPPCDGADTLLREADRALYRAKAGGRNRVERA 710 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 8/192 (4%) Query: 182 VIYPLLFGWVSYQTATKLAEHKRRLQVM---STRDGMTGVYNRRHWETMLRNEFDNCRRH 238 VI P + + + L E K RL +M +T D +TG+YNRR + + E + +R+ Sbjct: 103 VIKPYSLSVLLARVRSALRE-KERLDLMEKWATTDPLTGLYNRRFFFEQAQRELERVQRN 161 Query: 239 NRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMS 298 DA+ +I+DIDHFK +ND +GH VGD+ + L + + T R D+ RFGG+EF + + Sbjct: 162 ETDASFIILDIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKVDLCCRFGGEEFVICLP 221 Query: 299 GTPAESAITAMLRVHEGLNTLRLPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLAL 356 T E A+ R + + L NT + + + IS+GV+ N + + LK AD AL Sbjct: 222 DTDTEGALLVAERTRKKVEELSF-NTEKGPLHVTISLGVSSANENTT-LEDMLKRADDAL 279 Query: 357 YKAKKAGRNRTE 368 Y+AK+ GRNRTE Sbjct: 280 YQAKQNGRNRTE 291 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 102/182 (56%), Gaps = 6/182 (3%) Query: 190 WVSYQTATKLAEHKR---RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 W + T + E K RL ++T D +TG++NRR + + EF +R+ T+L+ Sbjct: 867 WYAVATIRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLM 926 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAI 306 +DIDHFK +NDT GH VGDE + L R + LR D++GR GG+EF V++ T A A+ Sbjct: 927 MDIDHFKRVNDTHGHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAM 986 Query: 307 TAMLRVHEGLNTLRLPNTPQVTLRI--SVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 R+ + + T TLRI S+G A N LK AD+ALY+AK++GR Sbjct: 987 EVAQRLRRAIEKASMA-TDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQSGR 1045 Query: 365 NR 366 N+ Sbjct: 1046 NK 1047 >UniRef50_B4SIV8 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SIV8_STRM5 Length = 481 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/194 (37%), Positives = 109/194 (56%), Gaps = 5/194 (2%) Query: 176 LSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNC 235 L++ V+ L FG S L E + L ++ +DG+TGV NRR ++ +L E++ Sbjct: 272 LAVTGFVVATLGFGVRSILLQVDLMERQASLDQLARQDGLTGVANRREFDALLLAEWNRA 331 Query: 236 RRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFA 294 RR + LL++DIDHFK ND GH GD + A+ L+I+ R D + R+GG+EFA Sbjct: 332 RRSGSELGLLLLDIDHFKVFNDRHGHPAGDRCLQAVATVLKISAGRAGDSVARYGGEEFA 391 Query: 295 VIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLN-PQMSHYREWLKSAD 353 VI+ G+P + R+ E + L LP ++ IS+GV L+ P ++ + L AD Sbjct: 392 VIVPGSPLSGVLALAERLREAVAALPLPEG---SVSISIGVGYLHPPALASADQLLADAD 448 Query: 354 LALYKAKKAGRNRT 367 LY AK+AGRN+ Sbjct: 449 AGLYAAKRAGRNQV 462 >UniRef50_A5IHM1 Components of sensory transduction system n=4 Tax=Legionella pneumophila RepID=A5IHM1_LEGPC Length = 356 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 100/166 (60%), Gaps = 6/166 (3%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 +++V+S D +TG++NRRH++ + RNE +R+ +L+ IDID+FK INDT+GH VG Sbjct: 190 KVRVLSITDSLTGLFNRRHFDVVFRNELSRAKRNKYPISLVFIDIDNFKYINDTFGHSVG 249 Query: 265 DEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 D ++ ++ L+ TL R SD + R GGDE+A I+ P AIT + E N Sbjct: 250 DSFLIHVSNILKQTLRRSSDSLFRIGGDEYAAILINMPPSEAITVCALLQEQFN----KK 305 Query: 324 TPQVTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRTE 368 + +S+GV ++ ++ + + +AD LY+AKKAG+N+ + Sbjct: 306 NQYKNVSLSMGVISIDSIRVIDQQSAITAADKTLYQAKKAGKNQIK 351 >UniRef50_Q30QH0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30QH0_SULDN Length = 615 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 96/165 (58%), Gaps = 2/165 (1%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 +L+ S RDGMTG+YNRR E ++ R+ +L++D+D FK +NDT+GHDV Sbjct: 436 EKLRDTSLRDGMTGLYNRRFLEEIIDKIMSQANRNKETYAVLMLDVDFFKMVNDTYGHDV 495 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 GD+ IVAL++ L+ ++R SD+ R+GG+EF +++S E + ++H L Sbjct: 496 GDKVIVALSKILKNSIRESDLAIRYGGEEFLILLSNATDEGIMQVANKIHSNFAALSFDV 555 Query: 324 TPQVTLR--ISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 TL+ IS+G++ + +K AD ALY+AK GRN+ Sbjct: 556 GTSETLKKTISIGISKFPTDGDTIWKCIKYADTALYEAKNTGRNK 600 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 8/188 (4%) Query: 186 LLFGWVSYQTAT------KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHN 239 L+ G++S A+ +L E ++ VM++ D +TG+ RR L NEF CRR + Sbjct: 174 LIGGFISKLRASLRVKNHQLNEALEKISVMASTDELTGLCTRRELMKQLSNEFSRCRRSS 233 Query: 240 RDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSG 299 +L ++DIDHFK IND++GH GD + + + +Q +R D +GR+GG+EF +I+ Sbjct: 234 GALSLCLLDIDHFKRINDSYGHQAGDAVLKKVAQTMQSLVRSIDCLGRYGGEEFLLILPQ 293 Query: 300 TPAESAITAMLRVHEGLNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYK 358 TP + A R+ + + P P+ + IS+G A L + + D ALY Sbjct: 294 TPLDGAFITAERLRRAVMDIPFPEVAPEFRVTISLGAAELE-EGEAMETLISRVDKALYA 352 Query: 359 AKKAGRNR 366 AK AGRNR Sbjct: 353 AKGAGRNR 360 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 92/169 (54%), Gaps = 3/169 (1%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ ++T DG+TG YNRR + + E R R +LL++DIDHFK +ND +GH GD Sbjct: 237 LKHLATTDGLTGAYNRRSFVEVCGQELQRADRRARPTSLLLMDIDHFKRLNDRFGHAAGD 296 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NT 324 E + + + LR DV+GR GGDEFAV++ T E A ++ L +P Sbjct: 297 EVLRQIVETGRRVLRSEDVVGRIGGDEFAVLLPATTLEQAGRVAEQLRTTYERLAVPARG 356 Query: 325 PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN--RTEVAA 371 T +S GVA P + E L+ AD ALY AK AGRN RTE A Sbjct: 357 GTATFTVSFGVAEWKPHLRTVEELLQRADRALYAAKNAGRNCVRTEEAC 405 >UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica RepID=A9L0C9_SHEB9 Length = 466 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 99/163 (60%), Gaps = 2/163 (1%) Query: 210 STRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIV 269 S +D +TG++NRR+ E+ L D+ +RH LL++D+DHFK+ ND GH GD+ +V Sbjct: 289 SVKDTLTGLFNRRYLESQLAIHIDHAKRHKEPLCLLVLDVDHFKAFNDQHGHLAGDDCLV 348 Query: 270 ALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ-V 327 + +QL+ +L R +D I R+GG+EF V++ T A+ + R+ ++ ++ Q + Sbjct: 349 TVAKQLEQSLYRPADFIARYGGEEFIVVLPHTDAKDGMQIAERLRLNVSAEKIEYQGQLL 408 Query: 328 TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 ++ IS+G A L + L +AD ALY+AK AGRN +VA Sbjct: 409 SVTISIGCAVLRHSEETAQSLLIAADSALYQAKAAGRNCVKVA 451 >UniRef50_A1WXD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXD1_HALHL Length = 324 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 102/165 (61%), Gaps = 5/165 (3%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 ++ L+ + +DG+TG YNRR + +L E + R+ + T ++ID D FK+IND +GH+ Sbjct: 155 EQELERQAQQDGLTGTYNRRKMDNLLHQERERAIRYRQQLTAMLIDADGFKAINDNYGHE 214 Query: 263 VGDEAIVALTR-QLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 GDE + L + LR D +GR+GGDEF VI+ T E+A R+ + + TL+ Sbjct: 215 AGDELLHDLVHCCFRPCLRTIDHLGRWGGDEFLVILPETSEEAAYHVAERIRDQVETLQ- 273 Query: 322 PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 P +T +S+G++ P+ S R+WL+SAD ALY+AK+ GRNR Sbjct: 274 PGPGAIT--VSIGISAYQPEESP-RDWLRSADFALYEAKRGGRNR 315 >UniRef50_A7HLS0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HLS0_FERNB Length = 538 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 95/163 (58%), Gaps = 1/163 (0%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 ++L+ S +D +TG+YNRR++ ML+NE +R+ +++++ID+D K INDT+GHD Sbjct: 366 QKLEEASFKDPLTGLYNRRYFMIMLKNEIRRAKRYGTKSSVMMIDLDGLKQINDTFGHDK 425 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 GD AI L + + + R +DV RFGGDEFA+++ TP + A + R+ E L + Sbjct: 426 GDLAIKTLAQAMISSTRVTDVCARFGGDEFAILLPQTPVDKAQVIVYRLKETLEKFNSES 485 Query: 324 TPQVTLRISVGVAP-LNPQMSHYREWLKSADLALYKAKKAGRN 365 T + + S G+ + LK AD LYKAK G+N Sbjct: 486 TEKFKIHFSAGITSIIKADDDEGINTLKRADELLYKAKSLGKN 528 >UniRef50_C1CX77 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CX77_DEIDV Length = 605 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + L+ S RD MTG++NRR+ E + E R + ++L +DIDHFK NDT+GH+ Sbjct: 429 RETLRQQSIRDPMTGLFNRRYLEETMERELHRATRDQQSVSVLAVDIDHFKKFNDTFGHE 488 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 GD ++A + +Q R D+I R+GG+EF +++ P E + E + L + Sbjct: 489 AGDAVLLAAAKTMQEYFRAEDIICRYGGEEFIIVLVNAPHEDILARANGFREKIAALTVK 548 Query: 323 NTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + Q+ + +S+GVA + R + AD ALY AK+ GRNR E A Sbjct: 549 HNRQMLGQVTVSIGVATYAEHGTDVRVLINQADQALYLAKQEGRNRVESA 598 >UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUF6_COMTE Length = 373 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 89/155 (57%), Gaps = 1/155 (0%) Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 D +TGV NRR + F RR+ L+ DIDHFK INDT GH GD+ + A+ Sbjct: 204 DDLTGVNNRRAFNEKAETMFAYTRRYGVPLCALLFDIDHFKQINDTHGHAAGDKVLQAVV 263 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQVTLRI 331 RQ++ LR +D+ GR GG+EF V+++GT + A+ R+ + ++ P N + + I Sbjct: 264 RQIKSALREADLCGRLGGEEFGVLLAGTNMQEAVQIAERIRLAVQAIKEPVNDTTLQVTI 323 Query: 332 SVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 SVGVA + + LK AD A+Y+AK GRN+ Sbjct: 324 SVGVAEADSACADVSTLLKQADAAMYRAKSNGRNQ 358 >UniRef50_B8FXR2 Diguanylate cyclase n=2 Tax=Desulfitobacterium hafniense RepID=B8FXR2_DESHD Length = 407 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 1/177 (0%) Query: 192 SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 S + A +L E ++ L+ ++T D +TG+ NR + NE RR N ++++ DIDH Sbjct: 211 SQRLAQELFESQKELEDLATTDPLTGISNRLKLNELGNNEMIRSRRLNHPFSVIVFDIDH 270 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 FK +NDT GH +GD+ +V LT++++ +R D GR GGDEF ++ T + R Sbjct: 271 FKEVNDTCGHPIGDKLLVELTQKIKAEIRDIDFFGRLGGDEFVLLFPETSIQKCHAVAER 330 Query: 312 VHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + + N + L +V + IS+G+A + + S + LK AD LYKAK +GRN T Sbjct: 331 LRQVTNDVALQFEDIKVHVSISLGIAEMTLEDSTIEDLLKRADENLYKAKHSGRNIT 387 >UniRef50_C4V482 Possible diguanylate cyclase n=2 Tax=Selenomonas RepID=C4V482_9FIRM Length = 620 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 98/162 (60%), Gaps = 2/162 (1%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 ++L ++ RD +T + NRR E +L+ + +++++DIDHFK++ND +GHD+ Sbjct: 447 QQLTQLAIRDTLTNLLNRREMERLLKEAVALSQAQKTPLSVILMDIDHFKAVNDNYGHDM 506 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 GD+ ++ ++ + T+RGSD R+GGDEF +I+ G P A R+ + ++P Sbjct: 507 GDKVLLTVSDAISRTIRGSDAGCRWGGDEFFIILQGAPLAVAGRVGERIRRRVEEAKMPF 566 Query: 324 TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 VT ISVG A +P+ + + K+AD ALY+AKKAGRN Sbjct: 567 HHNVT--ISVGAAAFDPEQDNELQLFKNADEALYQAKKAGRN 606 >UniRef50_B1Y3T8 Diguanylate cyclase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3T8_LEPCP Length = 366 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 109/209 (52%), Gaps = 24/209 (11%) Query: 182 VIYPLLFGWVSYQT-----------ATKLAEHKRR------LQVMSTRDGMTGVYNRRHW 224 V Y LFG S+ T A AE ++R L ++ D +TGV+NRRH+ Sbjct: 163 VTYTALFGLASFLTYQGNQVVRRALARAEAEIEQRKLVEAELSRIAITDALTGVWNRRHF 222 Query: 225 ETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDV 284 E + E +RH+ +LL+ D+DHFK++ND +GH GD+ + L R + +LR DV Sbjct: 223 EQTIGAERAKAQRHHTPLSLLLFDVDHFKALNDQFGHQAGDQVLTELARLVGRSLRDGDV 282 Query: 285 IGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV--TLRISVGVAPLNPQM 342 + R+GG+EFAVI+ PA A LR+ E L L + T+ S GVA L P Sbjct: 283 LARWGGEEFAVILHHCPAADA----LRLAEKLRGLVAGHAFDRVGTVTASFGVAELQPDE 338 Query: 343 SHYREWLKSADLALYKAKKAGRNRTEVAA 371 + W + DLALY AK GRN + A Sbjct: 339 T-LDAWFRRVDLALYAAKSGGRNAVRLGA 366 >UniRef50_A3WVM8 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVM8_9BRAD Length = 264 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 14/235 (5%) Query: 147 LVLMVVSCLVTLELTGITVSFNSAPLEWWLS--------LPIIVIYPLLFGWVSYQTATK 198 ++L + L + L + S++ W L +P+++ P +S + Sbjct: 21 ILLTIAGTLCCIALAFVIDSYSFVEGRWRLGPSPKDDVIIPLLIAPPFFLYLLS--KLRQ 78 Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR--DATLLIIDIDHFKSIN 256 LA +L V+++ DG+T +NR + T++ D R + + LL++D+DHFK++N Sbjct: 79 LAIAHEQLMVIASTDGLTSCFNRAAFTTLVDAYLDRVDRQEKGGEGALLVMDVDHFKNVN 138 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 D +GHD+GDEA+ + + ++ TLR D++GR GG+EF+V + G + + R+ E + Sbjct: 139 DNFGHDMGDEALKLIAQSIKSTLREVDLVGRMGGEEFSVFLPGIAPDRVVMVAERIRETV 198 Query: 317 NTLRL-PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + P L IS+G A + + + E K AD LY AK+ GR+R E+ Sbjct: 199 KAVNFCPQGIPCNLSISIGGATY-VRTASFSELYKLADKLLYDAKRQGRDRVELC 252 >UniRef50_A0JS55 Diguanylate cyclase n=2 Tax=Arthrobacter RepID=A0JS55_ARTS2 Length = 383 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 97/167 (58%), Gaps = 1/167 (0%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + R L+ ++T+DG+TG+ NR + + E R TL++ D+DHFK++NDT+G Sbjct: 211 QQTRALRAVATQDGLTGLLNRAAFLDLASEELLRLRHTRALGTLVLADLDHFKAVNDTYG 270 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H GD A+ + T+R +D++GR+GG+EF ++ G + A +++ L +R Sbjct: 271 HAAGDAALQSFASACNETVRSTDLVGRYGGEEFIFLLPGVSPDRAEAITAEINKQLEAVR 330 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 P+ ++ +S G+AP+ S E + +AD ALY+AK GRNRT Sbjct: 331 GPDGSRMPT-VSYGIAPIGKGTSGLDELIATADAALYRAKSLGRNRT 376 >UniRef50_A4XSU4 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Proteobacteria RepID=A4XSU4_PSEMY Length = 625 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 105/182 (57%), Gaps = 4/182 (2%) Query: 189 GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRH-NRDATLLII 247 G+++ TA K E + LQ ++T D +T + NRRH+ L +R + A +L+ Sbjct: 444 GFMTDITARKQIEGE--LQALATTDFLTQLANRRHFMAQLEAVLARLQRSPGQSAAILMF 501 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 D+DHFK+IND WGHDVGD+A+ L+ LR +D GR GG+EFAV++S A+ Sbjct: 502 DLDHFKAINDRWGHDVGDQALRHFAAILRGQLRKTDTAGRLGGEEFAVVLSEADLPKAVQ 561 Query: 308 AMLRVH-EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 RV E T LP+ Q+ L +SVG++ L+ + L +D+ALY AK+ GRNR Sbjct: 562 FATRVQGELARTPILPDGEQIFLAVSVGISSLSSCDTSVEAALSRSDIALYCAKRGGRNR 621 Query: 367 TE 368 E Sbjct: 622 IE 623 >UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter sp. M18 RepID=C6MUF5_9DELT Length = 739 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 96/173 (55%), Gaps = 3/173 (1%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 T++ E R + +S D +TG+YNRR ++ L E + R + T++ ID+D FK+ N Sbjct: 529 TEVLEESERFEQLSVTDALTGLYNRRFLKSRLEEELNRSIRQGLNLTVIFIDLDFFKNFN 588 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 D GH GDEA+ ++ +LR D++ R+GG+EF ++ GT A+ R+ + Sbjct: 589 DLCGHLAGDEALKITADIIKASLREMDIVARYGGEEFCAVLPGTSKAEAMIVAERIRSEI 648 Query: 317 NTLRLP---NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + P + PQ+ L S+G+A + + S+D+ALY+AK +GRNR Sbjct: 649 EKEKFPGEKDIPQMRLTASLGIASFPEDGRTFTTLVHSSDVALYEAKASGRNR 701 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 67/174 (38%), Positives = 97/174 (55%), Gaps = 3/174 (1%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 T +++ L+ +S D +TG++NRRH+ T++ EF RR + TL ++DIDHFK +N Sbjct: 365 THQQQYQEHLKRLSRTDELTGLFNRRHFITLMHKEFSRARRTHERLTLAMLDIDHFKDVN 424 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA--ITAMLRVHE 314 D +GHDVGD + L R L+ +R D+ R+GG+EFA+ T A I LR Sbjct: 425 DKYGHDVGDHVLQHLGRILREDVRPYDIAARYGGEEFAICFPDTDLSQADHICERLRTLC 484 Query: 315 GLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + N + +S G++ L P+ LKSAD ALY AK GRNR E Sbjct: 485 AASEVS-RNGGTIGFTVSFGLSELRPEHEDLDGLLKSADNALYAAKANGRNRIE 537 >UniRef50_C6C817 Diguanylate cyclase with hemerythrin-like metal-binding domain n=2 Tax=Dickeya dadantii RepID=C6C817_DICDC Length = 531 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 65/173 (37%), Positives = 91/173 (52%), Gaps = 5/173 (2%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 A AEH L M+ +D +TG +NR + + R E + R+ +LL+ D+DHFK + Sbjct: 207 AKDRAEHLNNL--MARQDSLTGCWNRIRIQEIARQEMERLERYGYPVSLLMFDLDHFKEV 264 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 ND +GH VGD+ + + LR +DV GR+GG+EF I+ T A+ R+ Sbjct: 265 NDKFGHSVGDKVLKGFSDTALALLRTTDVFGRWGGEEFVAILPATGFTGAVQTAERIRAA 324 Query: 316 LNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 L P ++T I V V H+ WL AD ALY+AK AGRNRTE Sbjct: 325 LEAQTFPGGVKITTSIGVSVC---QSTDHWESWLGRADAALYRAKAAGRNRTE 374 >UniRef50_A8I9A7 Putative uncharacterized protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I9A7_AZOC5 Length = 309 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 69/163 (42%), Positives = 97/163 (59%), Gaps = 3/163 (1%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ ++T D +T ++NRRH+ + R F R + +LL +DIDHFK +NDT GH +GD Sbjct: 135 LRRLATIDPLTEIFNRRHFMEVARQAFAEAERSHAPLSLLTLDIDHFKIVNDTHGHGIGD 194 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT--LRLPN 323 E I A+ R+ TLR DV+ R GG+EFA++M GT A+ A + +G+ + L LP Sbjct: 195 EVIRAVARRCGQTLRPKDVLARMGGEEFAILMPGTTAQEACAQAWALFDGVTSEPLVLPE 254 Query: 324 TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 Q+ + ISVG A P S L AD ALY AK++GR R Sbjct: 255 L-QLRVSISVGGAQCLPDDSSLDATLTRADRALYAAKRSGRGR 296 >UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNX7_RHORT Length = 492 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 69/174 (39%), Positives = 99/174 (56%), Gaps = 4/174 (2%) Query: 197 TKLAEHKR---RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 T + E KR L+ ++T D +TG NRR + R + +RH T+ + DIDHFK Sbjct: 315 TDITEQKRMEEALRRLATTDPLTGALNRRAFMEAARRDLALAQRHGEPVTVALADIDHFK 374 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +ND GH GDEA+ + LR SDV+GR GG+EFA+I+ T SA+ R+ Sbjct: 375 RVNDQHGHATGDEALKTFVATVHGALRASDVLGRMGGEEFALILPHTALASAMLLADRLR 434 Query: 314 EGLNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + L LR+P + +V +S+G+A L + L++AD ALY+AK AGRNR Sbjct: 435 QTLANLRVPCPSGEVEFTVSIGLAELGTHGTTIDTLLQAADEALYRAKSAGRNR 488 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 1/169 (0%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 ++L+ ++ D +T V NRR + E R++ D L++ID DHFK IND +GH Sbjct: 294 QKLEELAATDSLTRVANRREFMKRSEEEMSRSSRNSTDLCLMVIDFDHFKEINDQYGHQA 353 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP- 322 GD+ + + + +R SD++GR GG+EFA+++ T SA+ R+ + + + Sbjct: 354 GDKVLKDFVKLAKEVMRPSDLLGRIGGEEFALLLPETNIRSAVKVAERLRQHIEEESIVI 413 Query: 323 NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + ++ L IS+GVA P++ ++WL AD LY+AK GRNR V A Sbjct: 414 GSKRIKLTISIGVAEYQPKVDTVKKWLHRADEFLYQAKDKGRNRVVVEA 462 >UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRN6_9GAMM Length = 504 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 7/183 (3%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + A++L +LQ M+ RD +TG YNRR+++ ML F+ RH + +L +D+DHFK Sbjct: 322 RKASELERTAVQLQEMARRDPLTGAYNRRYFDEMLSQRFEAATRHQQPLSLGFLDLDHFK 381 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +ND +GH GD + + + + LRG D + R+GG+EF +++ T E A + R+ Sbjct: 382 MVNDRYGHQAGDVVLAGVAKAISSRLRGDDFLARYGGEEFVLLLPNTNLELAQRILERIR 441 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYR------EWLKSADLALYKAKKAGRNRT 367 + T P+ +RI++ A M R + +++AD ALY AK+ GRNR Sbjct: 442 AHIETEEHTVAPEHMIRITLS-AGAAAHMDGSRISNKLDDLIRAADRALYLAKRQGRNRV 500 Query: 368 EVA 370 EVA Sbjct: 501 EVA 503 >UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47X90_COLP3 Length = 364 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 1/177 (0%) Query: 192 SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 S + L + L +S D +T +YNRR++ M + R + +L+++DID Sbjct: 186 SVEANDSLEKSVNELHRLSIMDNLTNIYNRRYFFEMSKKLIATAFREQKPVSLIMLDIDL 245 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 FK +ND +GH GD ++ L ++L+ +R SDV R GG+EF ++++ T E A + Sbjct: 246 FKRVNDNYGHQAGDCILIDLVKELEKVMRKSDVFARIGGEEFTILLNNTSLEGAKVIAEK 305 Query: 312 VHEGL-NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + + N + + NT + + IS+GV+ LN + + + K AD LY+AK GRNR Sbjct: 306 MRLTIENKVFIYNTTSIDITISIGVSELNTENTSIEDLYKQADKQLYRAKHKGRNRV 362 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 67/174 (38%), Positives = 100/174 (57%), Gaps = 4/174 (2%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L + ++LQ +S D +T +YNR HWE L+ E+ RH LL++DIDHFKSIND Sbjct: 144 LQKANQQLQHLSRTDHLTQLYNRGHWEQRLQFEYS---RHGSSIALLMLDIDHFKSINDR 200 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 GH GD I ++ + +R SDV GR+GG+EFA+++ T A T R+ + + Sbjct: 201 HGHQAGDAVIKRVSELIHQHVRDSDVAGRYGGEEFAILLPHTDLAGARTLAERLRQSVEE 260 Query: 319 LRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + Q + IS+G+A L+ +R ++ AD ALY +K+AGRNR A Sbjct: 261 QEVIHNGQAIAFTISLGIACLDRPARDHRCLIEWADQALYASKRAGRNRVSTYA 314 >UniRef50_UPI0001B57A43 diguanylate cyclase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57A43 Length = 420 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 5/172 (2%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDA--TLLIIDIDHFKSINDTWG 260 K++LQV D TG+ N W + EF RR + +L+ID+DHFK INDT+G Sbjct: 249 KQQLQVAVVTDEKTGLLNTAGWHELATREFTRARRRGAGSGFAVLMIDLDHFKRINDTYG 308 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES--AITAMLRVHEGLNT 318 H GDE + A+ ++ ++R SD +GRFGG+EF V++ T I +RV G T Sbjct: 309 HLTGDEVLAAVAVAIEASVRQSDTVGRFGGEEFVVLLPATGGTDVLGIAERVRVAVGELT 368 Query: 319 LRLPNTPQVT-LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + +++ L +SVGVA + E L+SAD ALY+AK AGRNR V Sbjct: 369 VSVGGPLRISGLSVSVGVACYPQAGTTLDEVLRSADAALYRAKDAGRNRVAV 420 >UniRef50_Q1D603 Response regulator n=2 Tax=Cystobacterineae RepID=Q1D603_MYXXD Length = 318 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 6/180 (3%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 A + +E +RRLQ+++ DG+TG+ N R + EF +R+ +++IID+DH K+I Sbjct: 126 ALRQSEQQRRLQILAQTDGLTGLANFRALSIRMEEEFRRAQRYQYPLSVVIIDLDHLKAI 185 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 ND GHDVG+ AI+AL QL+ LR SD RFGGDEF ++ A A R+ G Sbjct: 186 NDGMGHDVGNRAILALATQLKHELRESDFAARFGGDEFVALLPHQTALEAAVFAERIRTG 245 Query: 316 LNTLRLPNTPQ----VTLRISVGVAP--LNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 L + + + L +SVG+A +K+AD ALY+AK+ GR+R V Sbjct: 246 LRAVGVQKSDGRPAPFGLSVSVGIADHTFEGPREDTESLMKAADAALYEAKREGRDRVVV 305 >UniRef50_A9FTU9 Putative membrane protein (GAF and GGDEF domain) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FTU9_SORC5 Length = 859 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 96/169 (56%), Gaps = 5/169 (2%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 RRL+ ++T DG+TG+ N+R + + RR +R ++L+ DIDHFK +NDT+GHDV Sbjct: 542 RRLEELATMDGLTGLLNKRAMLEVADQKITAARRFSRRLSVLVTDIDHFKKVNDTYGHDV 601 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE--GLNTLRL 321 GD I L L+ R +D + RFGG+EF VI T A A+ RV E G T Sbjct: 602 GDVIIKGLGDVLRRAKRTTDAVARFGGEEFVVICEETDARGAMLLAERVREELGRTTFHA 661 Query: 322 PNTP---QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + Q + S+G+A S + E K+AD +LY +K++GRNR+ Sbjct: 662 AGSSGPVQCQVTCSIGIATYPEAGSTWEELFKAADESLYVSKRSGRNRS 710 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 93/168 (55%), Gaps = 7/168 (4%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 LQ ++ RD +TG+YNRR+ + L E RR +L+++DIDHFK +NDT+GH VGD Sbjct: 471 LQELAVRDSLTGLYNRRYLDETLEREVSRARREGIPLSLVMLDIDHFKQVNDTYGHQVGD 530 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH---EGLNTLRLP 322 E + L L +R DV R+GG+EF +++ P E T MLR + L + Sbjct: 531 EVLRILASTLSADIRAEDVACRYGGEEFLILLPNMPLE---TTMLRAQGWRSAVEALSVK 587 Query: 323 NTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + Q+T IS+GVA + + AD ALY+AK GRN+ V Sbjct: 588 HGNFQITFTISLGVAAYPEHGKTPDDLTRCADQALYRAKNEGRNQVSV 635 >UniRef50_A7N081 Putative uncharacterized protein n=6 Tax=Vibrio RepID=A7N081_VIBHB Length = 354 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 15/206 (7%) Query: 171 PLEWWLSLPIIVIYPLLFG--WV--SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWET 226 P E W I + L G WV S + TK ++RL+ +S D +TGV NRR + T Sbjct: 129 PEETWFEAIIKPVEDLQSGENWVIWSVRDVTKTHLLEKRLKELSETDELTGVLNRRAFLT 188 Query: 227 MLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIG 286 L + R ++ + ++IDIDHFK IND GH GD+ I + + Q +RGSD IG Sbjct: 189 RLDKAMSSHLRPSQTLSCIMIDIDHFKEINDQVGHFSGDQVIHHVAKICQRAIRGSDFIG 248 Query: 287 RFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP------QVTLRISVGVAPLNP 340 R GG+EFAVI+ T A A R+ E + N P +++ +S+GVA + Sbjct: 249 RLGGEEFAVILVNTSAIQAYDVAERIREAIQ-----NAPCKVDGIEISTTVSIGVAEYDE 303 Query: 341 QMSHYREWLKSADLALYKAKKAGRNR 366 Q+S E + +AD A+Y +K +GRN+ Sbjct: 304 QVSSTTELMVNADKAMYYSKHSGRNQ 329 >UniRef50_B3E7P2 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E7P2_GEOLS Length = 237 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 66/179 (36%), Positives = 101/179 (56%), Gaps = 2/179 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q T+L R L + + D MTG+ NRR M+ EF RH R A++++ D+D+FK Sbjct: 60 QLQTQLVNMNRSLDLATRIDPMTGLANRRAIMEMIEQEFSRAHRHQRPASIIMADLDYFK 119 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +NDT G + GD+ +V ++R L+ LR D+ R+GG+EF V++ T + A+ ++ Sbjct: 120 KVNDTHGFNTGDDVLVEVSRVLRGCLRNEDICSRWGGEEFLVLLPETQLDGALAVANKIR 179 Query: 314 EGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 E + N P + L IS+GV P + + E + AD AL++AK GRNR VAA Sbjct: 180 ESVAMTEFKVNRPGIQLTISLGVCEYKPDQNIF-EAISRADQALFQAKLGGRNRAIVAA 237 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 6/176 (3%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q T+LA ++++L M+T D +TGVYNRR E+ L+ E D R++R +L++IDID FK Sbjct: 125 QDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPFSLMMIDIDFFK 184 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA--ITAMLR 311 +NDT GH GD + + +R SD + R+GG+EF ++ T ++A + LR Sbjct: 185 KVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDCDAAETVAEHLR 244 Query: 312 VH-EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 H E + L +VT IS+G+A P S +K AD ALY+AK++GRNR Sbjct: 245 AHIENMEHLFQKKVIRVT--ISLGIACFAPDDSP-ETLVKRADEALYQAKRSGRNR 297 >UniRef50_C8QZT0 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZT0_9DELT Length = 285 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 129/249 (51%), Gaps = 20/249 (8%) Query: 133 NLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVS 192 ++G FV+ LV + + T EL+G+ + AP + I+ LL +S Sbjct: 40 KILGIFIFFFFVSYLVYVFLQQSRTGELSGVDLI---APFILFFG----AIFVLLVNLLS 92 Query: 193 YQTATKLAEHKR--RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 +T +L KR L+ + D + G+YNRR+ E ML EF RR ++L++DID Sbjct: 93 LKTTLEL---KRICTLEQENITDPLLGIYNRRYLEEMLELEFRLSRRDGLPLSILLLDID 149 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFK +ND GH GD ++ L ++++ LR +D + R+GG+E +++ TP + A Sbjct: 150 HFKEVNDKHGHLAGDRTLLNLVQEIKGNLRETDQLARYGGEEILIMLPHTPEDGAKLVAE 209 Query: 311 RVHEGLNTLRLPNT--------PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 ++ G+ + P +++ +S+GVA L + S +E AD ALY+AKK Sbjct: 210 KIRRGIAGGIMVAAGEREDEGWPDISITVSIGVAGLRDEFSSGKELFAKADQALYRAKKT 269 Query: 363 GRNRTEVAA 371 GRNR A+ Sbjct: 270 GRNRCVAAS 278 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 103/173 (59%), Gaps = 5/173 (2%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 TA K AE K L+ ++TRD +TGV+NRR++ + E ++ +R+ +L++ DIDHFK Sbjct: 590 TAQKQAESK--LRELATRDSLTGVWNRRYFFELAARELESAQRYKHPLSLILYDIDHFKR 647 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 INDT+GH +GDE + LT+ + LR D++ R GG+EFAV++ T E A T R+ Sbjct: 648 INDTYGHMIGDEVLRQLTQLVGANLRNVDLLARVGGEEFAVLLPHTYLEQAHTVARRILR 707 Query: 315 GLN--TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 G+N +R P + L IS+G++ + + AD ALY AK GRN Sbjct: 708 GVNEAVIRTEAGP-LQLTISIGMSSSAHADNCLESLIHDADQALYAAKNKGRN 759 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 2/165 (1%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + L+ ++TRD +TGV NRR +L E + RR+NR LL ID DHFK INDTWGH Sbjct: 227 ENELEALATRDSLTGVLNRRECSRVLIEELERARRYNRPLALLWIDFDHFKEINDTWGHA 286 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP-AESAITA-MLRVHEGLNTLR 320 GD + +++ L+ ++R D +GRFGG+EF +I+ AE+ TA LR + Sbjct: 287 AGDSVLCSISSLLEDSVRSVDTLGRFGGEEFVLILPEMDVAEAEETAERLRQRVCNQPVA 346 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 L + + L IS+GVA +AD A+Y+AKK GRN Sbjct: 347 LESGHNIRLTISIGVAVFPDHGDTLDALCAAADKAMYRAKKQGRN 391 >UniRef50_Q31JG8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JG8_THICR Length = 461 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 2/165 (1%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 + Q M+ D +T +YNRR LR +F R +L ++DIDHFKS+NDT+GH VG Sbjct: 286 KFQKMAAIDSLTAIYNRRFGMDRLREDFSRAVREQSSLSLAMVDIDHFKSVNDTYGHLVG 345 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV-HEGLNTLRLPN 323 D+AI + ++ TLR D++ R+GG+EF +I+ G + +A R+ H+ +T Sbjct: 346 DKAIKLIATIIKKTLREGDIVVRYGGEEFLMILHGASSTNARNVCERIRHQVKDTFFKEG 405 Query: 324 TPQVTLRISVGVAPL-NPQMSHYREWLKSADLALYKAKKAGRNRT 367 Q+ L +S+G+A Q + AD ALY AK+ GRNR Sbjct: 406 NQQIQLTVSIGIAAYPEQQAGDEMALIHMADQALYYAKEGGRNRV 450 >UniRef50_B1WVD6 Two-component response regulator n=7 Tax=Chroococcales RepID=B1WVD6_CYAA5 Length = 335 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 19/194 (9%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 +T +L + ++ ++ D +TG+ NRR ++ + EF+ +R+N +LLIID+D FK Sbjct: 133 RTKDELKKAYEEMKRIAATDELTGIPNRRSIFSLGKQEFERSQRYNSSFSLLIIDVDKFK 192 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVI----------------GRFGGDEFAVIM 297 +INDT+GHD+GDEA+ + + LR D I GR GG+EF VI+ Sbjct: 193 TINDTYGHDIGDEALKMMVKITLNCLRKVDYIGRLETEEEALAKKGHLGRLGGEEFVVIL 252 Query: 298 SGTPAESAITAMLRVHEGL--NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLA 355 T + A A RV E + TL++ + V++ +S+G+A + + + LK ADLA Sbjct: 253 PHTNLKGAYKAAQRVCEAMTKETLQVEDKT-VSITVSIGIATYDSKDQKMEDILKRADLA 311 Query: 356 LYKAKKAGRNRTEV 369 L+ AK+ GRNR + Sbjct: 312 LFAAKENGRNRVAI 325 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 75/180 (41%), Positives = 102/180 (56%), Gaps = 9/180 (5%) Query: 195 TATKLAEHKR---RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 +A + E KR L+ ++T D +TG+YNRRH+ +L E + +R+ + L+ +DIDH Sbjct: 398 SAQDITERKRAEEHLRYLATTDELTGLYNRRHFMEILDTEIERAKRYEQSLALISLDIDH 457 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 FK+INDT GH VGD A+ L QL R D +GR GG+EFA+I T A R Sbjct: 458 FKTINDTHGHAVGDAALEHLAAQLLACKRQPDSLGRLGGEEFALIAPHTDRAGATELAER 517 Query: 312 VHEGLNTLRLPNTPQVTL---RISVGVAPLNPQMSHYRE-WLKSADLALYKAKKAGRNRT 367 + L R P + T IS+GV LN Q + + LK AD ALY+AK+ GRNRT Sbjct: 518 IRSELE--RTPIELESTSLHPTISLGVTALNIQDNDTIDALLKRADDALYEAKRTGRNRT 575 >UniRef50_Q1NEB9 Sensory box/GGDEF domain protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEB9_9SPHN Length = 600 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 102/182 (56%), Gaps = 8/182 (4%) Query: 192 SYQTATKLAEHK-RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 S + A + AE +R +M+ D +TG+ NRR E +L + + ++ I DID Sbjct: 425 SMEQARRSAEDAAQRALIMAQTDQLTGIANRRRTEFVLDQAIGAAEQSGKSVSIAIFDID 484 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFK IND++GH GDE I + + LR D++GR+GG+EF +++ E+A+ Sbjct: 485 HFKRINDSYGHHTGDEVIKRVAQDAAAQLRSGDLVGRYGGEEFVIVLPDATQETALRVGE 544 Query: 311 RVHEGLNTLRLPNT-PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 R+ E T+ N+ P VT IS+GVA L Q L+ AD ALY AK+AGRNR + Sbjct: 545 RIRE---TIEAANSGPPVT--ISIGVAEL-AQGETADALLRRADRALYSAKRAGRNRLHL 598 Query: 370 AA 371 AA Sbjct: 599 AA 600 >UniRef50_D1B074 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B074_SULD5 Length = 172 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 97/165 (58%), Gaps = 4/165 (2%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ S DG+TG+ NRR+++ + E RR+ TL+++D+DHFK INDT+GH VGD Sbjct: 2 LKQESITDGLTGLRNRRYFDQRISEEVALSRRYKLPLTLMLVDVDHFKKINDTYGHTVGD 61 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN-- 323 E + L++ + +R SD++ R+GG+E +I T E A R+ E + ++ Sbjct: 62 EVLKKLSQIILSVVRDSDIVARYGGEEIVIITPNTTKEDAGILAERLREKVEQTKVATIA 121 Query: 324 TPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 T Q V + IS+GV L+ ++ L+ +D ALY AKK GRNR Sbjct: 122 TTQEVVQVTISIGVCALSAVITDQEALLEESDQALYLAKKYGRNR 166 >UniRef50_Q1GXZ8 Diguanylate cyclase (GGDEF domain) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXZ8_METFK Length = 599 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 12/183 (6%) Query: 194 QTATKLAEHKRRLQVMSTR----------DGMTGVYNRRHWETMLRNEFDNCRRHNRDAT 243 +T ++AE +R +Q ++ + D +TG NRR E L EFD RRH + Sbjct: 408 ETQQRVAESERLVQELTAKLEHVNEVAHEDFLTGTLNRRGMEQALEREFDRARRHATRLS 467 Query: 244 LLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAE 303 L ++DIDHFK +ND GH GD+A+V L++ L+ +LR +DV+ R+GG+EF +I+ T Sbjct: 468 LAMMDIDHFKRLNDRLGHATGDKALVHLSKVLKASLRSTDVLARYGGEEFIIILPDTGEA 527 Query: 304 SAITAMLRVHEGLN-TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 A+ M R L + N +V + S GVA Q + AD ALY AK+A Sbjct: 528 EAVEIMKRAQRDLTRNFFMHNNERVLITFSAGVAE-REQDEPPESLVPRADRALYHAKQA 586 Query: 363 GRN 365 GRN Sbjct: 587 GRN 589 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 99/164 (60%), Gaps = 3/164 (1%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+++++ D MT +YNRR++ + +R + ++L+IDID FK +NDT+GH GD Sbjct: 394 LKLLASTDSMTKLYNRRYFTEISAKVLHLSKREKNNLSILMIDIDRFKVVNDTYGHQFGD 453 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA--ITAMLRVHEGLNTLRLPN 323 E ++AL+R L R SD++ R+GG+EF +++ T + A I +R+ T+ P Sbjct: 454 EVLIALSRLLVEHQRKSDIVCRYGGEEFVILLPNTSLKDATNIAQKIRILVESLTMEAPT 513 Query: 324 TPQVTLRISVGVAPLNPQMSHYREW-LKSADLALYKAKKAGRNR 366 + IS+GVA ++ + ++ LK AD ALY+AK +GRNR Sbjct: 514 NKEFKFTISIGVAQIDVEHEDDIKFALKRADDALYRAKNSGRNR 557 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 69/179 (38%), Positives = 105/179 (58%), Gaps = 9/179 (5%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L + +L+ +S DG+T V NRR ++ L E++ RH + +L+++DIDHFK +ND Sbjct: 378 ELEQANEQLRAISLTDGLTHVANRRRFDEKLETEWNRALRHEHELSLILLDIDHFKQVND 437 Query: 258 TWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 +GH VGD+ +VAL L + R D++ R+GG+EFA+++ T A R+ L Sbjct: 438 RFGHLVGDDCLVALASILSDEVQRSGDLVARYGGEEFAILLPTTDVAGAQQVAERMR--L 495 Query: 317 NTLRLP-----NTPQVTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRTEV 369 + R P + V+L IS+GVA L P + S +E ++ AD ALY AK GRNR V Sbjct: 496 SVARTPVNSGEHMSPVSLTISLGVATLTPNRQSDCQELIRRADEALYAAKSDGRNRVVV 554 >UniRef50_A1K7E0 GGDEF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7E0_AZOSB Length = 471 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 68/163 (41%), Positives = 88/163 (53%), Gaps = 1/163 (0%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ ++ D +TG NRR + L +E+ RR LL +DIDHFK IND GH GD Sbjct: 303 LRRLAATDPLTGASNRRQFMATLASEWARARRERAPLALLALDIDHFKHINDRHGHPAGD 362 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NT 324 A+ LR DVIGR GG+EFA+++ GT A A R+ G+ L L + Sbjct: 363 HALKTFVSAAAGLLRPGDVIGRIGGEEFAIVLPGTQAADAHGIAERIRHGVEALALDIDG 422 Query: 325 PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 V L +SVGVA P + + LK AD LY+AK AGRNR Sbjct: 423 VPVALTVSVGVAVSGPSCTEPGDLLKEADRRLYEAKNAGRNRV 465 >UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXI5_MARAV Length = 523 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 109/211 (51%), Gaps = 27/211 (12%) Query: 179 PIIVIYPL--LFGWVSYQTATKLA------EHKRRLQVMSTRDGMTGVYNRRHWETMLRN 230 P++ Y + + WV YQ+ K+ + LQ S D +TG+ NRR+++ + R+ Sbjct: 321 PVVKDYGIARVISWV-YQSVEKIGITLSGLALRAELQRFSYEDSLTGLKNRRYFDELFRH 379 Query: 231 EFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGG 290 E + R +R LLI DIDHFK ND GH+ GD+A+ + L RGSD + R+GG Sbjct: 380 EREVSARSDRPLCLLIFDIDHFKLFNDCHGHEAGDQALRMVGDVLATCFRGSDTVCRYGG 439 Query: 291 DEFAVIMSGTPAE----------SAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNP 340 +EF+V+M G + +AI+A H G N +L IS G+A Sbjct: 440 EEFSVLMPGASLDEARQRAEQLRAAISAEPVEHRGENL--------GSLTISAGIACWRE 491 Query: 341 QMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + E ++AD ALY+AK+ GRNR A+ Sbjct: 492 NCPEFDELFRAADQALYQAKETGRNRVVAAS 522 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 3/170 (1%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 TK E L ST D +TG+YNRR+ E L +RH+R +L++ DID FK IN Sbjct: 602 TKEKELSDMLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKHIN 661 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 D++GHDVGD+ + A+ + + +R +D+ R+GG+EF +I T E A ++ + Sbjct: 662 DSFGHDVGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLI 721 Query: 317 NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 L VT S GVA L + LK AD ALY+AKK GRN+ Sbjct: 722 RNLHFEEGINVTC--SFGVASLEKHDTK-ETLLKRADEALYEAKKTGRNK 768 >UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter RepID=B8JB86_ANAD2 Length = 764 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 3/165 (1%) Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 ++T DG+TG+ N R ++ L +R+ + +LL+ DIDHFKS+NDT+GH VGD+ + Sbjct: 591 LATTDGLTGLTNHRTFQERLDAHLGQAQRYGKRTSLLLCDIDHFKSVNDTYGHPVGDQVL 650 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT 328 + R L RG+DV+ R+GG+EFA++M T A+ R+ E + L T Q Sbjct: 651 RGVARTLARAARGTDVVARYGGEEFAIVMPETDTGGAMVIAERIREKVGQLVF-ETEQGP 709 Query: 329 LRI--SVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 L++ S+GVA + ++ AD LY AK+ GRN++ AA Sbjct: 710 LKVTLSLGVATFPDDGAQKPALIERADACLYHAKRHGRNQSVSAA 754 >UniRef50_D1U9W6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9W6_9DELT Length = 366 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 107/177 (60%), Gaps = 10/177 (5%) Query: 199 LAEHKRRLQVM---STRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 + E KR ++ M + D MTG++NR ++ + E + RR + +L+++D+DHFK+I Sbjct: 172 VTERKRMIEEMCRLARTDSMTGMWNRGYFMELAGRELNRARRSGGELSLIMLDVDHFKAI 231 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT GHDVGD A++ L R + ++R DV R GG+EFAV++ T AE A +R+ Sbjct: 232 NDTHGHDVGDVALMELARVIGESVREVDVAARLGGEEFAVMLPDTSAEDACAVAVRI--- 288 Query: 316 LNTLR--LPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 T+R + ++P+ V++ +S+G+A LK +D+ALY AKK GR+R E Sbjct: 289 ARTIRRAVVDSPRGPVSMTVSMGLASFEESKDSLDSLLKYSDIALYAAKKNGRDRVE 345 >UniRef50_D1B078 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B078_SULD5 Length = 417 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 94/170 (55%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 E+ +++ M+ D ++G+ NRR++ ++ F R+ L +ID+D FK INDT G Sbjct: 248 EYIAKIKDMAQNDFLSGLANRRYFFDAMQEYFKEARKQKESFALGLIDVDKFKQINDTLG 307 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H VGD+ IVAL + L+ L I R GGDEF +++ + A+ +++ + + Sbjct: 308 HRVGDQVIVALAKTLKEQLTHDHFIARIGGDEFCLVLKDIEQKKALEFFIKLQCAVAKIE 367 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 +P + + + +SV + + E + AD ALYKAKK GRNR EVA Sbjct: 368 IPVSAEEKVGVSVSIGVTFNDLESVEEMINQADKALYKAKKNGRNRVEVA 417 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/172 (36%), Positives = 99/172 (57%), Gaps = 3/172 (1%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 E + RL M+ D +TG+YNRR + + R EF+ +R++ T+L++DID+FK IND +G Sbjct: 348 EAESRLLQMAATDELTGLYNRRRFFELARGEFNRAKRYSSPMTILLLDIDYFKRINDEYG 407 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 HD GD A+ + + LR DV+ R GG+EF ++ T A R+ + + Sbjct: 408 HDAGDTALRCIVSMIASQLRSLDVLARLGGEEFVALLPETHQFDAERIAERIRSEIESTA 467 Query: 321 LPNTPQVTL--RISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + N + TL +S+GVA + +M E + AD A+Y+AK+ GRN+ +A Sbjct: 468 I-NLFETTLFVTVSIGVAGYSKEMQDVGELINRADEAMYRAKRDGRNQVCLA 518 >UniRef50_Q2SD41 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SD41_HAHCH Length = 313 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 13/205 (6%) Query: 167 FNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWET 226 F + + +L +IYPL G + YQ A A D +TGV N+R ++ Sbjct: 108 FTDSEIHVIETLLGSLIYPLRNG-LRYQEAMNAA----------LSDSLTGVANKRAFDY 156 Query: 227 MLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIG 286 L E R+ ++L DIDHFK +NDT+GH GD + L + +Q R SD+ Sbjct: 157 QLHREVSLATRYKYKLSMLFFDIDHFKKVNDTYGHAAGDALLQQLAKVVQDNCRDSDLCF 216 Query: 287 RFGGDEFAVIMSGTPAESAITAMLRVHEGL-NTLRLPNTPQVTLRISVGVAPLNPQMSHY 345 RFGG+EFA++++ T E A R+ E + NT ++ IS+GVA + + + Sbjct: 217 RFGGEEFAMLLAKTETEGAYAIAERLREAVANTAFQHEGHTISFTISIGVATYDGEENR- 275 Query: 346 REWLKSADLALYKAKKAGRNRTEVA 370 ++L+ AD ALY AK AGRN+T++A Sbjct: 276 SDFLERADQALYDAKHAGRNKTKIA 300 >UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUP2_DESOH Length = 1644 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 96/162 (59%), Gaps = 6/162 (3%) Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 DG+TG+YN +++ ML+ E +R R+ ++++IDIDHFK NDTWGH GD + + Sbjct: 1484 DGLTGLYNHDYFQNMLQQELLLAKRKGRELSMIMIDIDHFKRFNDTWGHQAGDMVLREVA 1543 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP----QVT 328 +++ + R SDV+ R+GG+E A+++ T E+A ++ + LR+ + P QVT Sbjct: 1544 AEIRESCRSSDVVARYGGEEMALLLHETGPEAAFALAEKIRRRVEALRVEHAPGEYLQVT 1603 Query: 329 LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 IS+GVA + + +K AD ALY +K GRN +A Sbjct: 1604 --ISLGVAGFPIHAKNKKPLVKKADDALYSSKAGGRNMVTLA 1643 >UniRef50_C6HY96 Diguanylate cyclase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HY96_9BACT Length = 454 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 2/173 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 +T+ L H+ L+ S D +T + NR + + + TLL+IDIDHFK Sbjct: 275 ETSHALFAHRSLLKRKSEHDPLTKILNRESLDLFIHKAWKEALFRKTSLTLLMIDIDHFK 334 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +NDT GH +GDE IV++T ++ TLR D GR+GG+EF V++ E+ + R+ Sbjct: 335 QVNDTLGHQIGDEVIVSVTEKIAGTLRARDGFGRYGGEEFVVVLPEIDKETGLRIAERIL 394 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + +L P +T +S+GVA +S E + AD LY+AK+AGRNR Sbjct: 395 GAVRSLAHPQARNIT--VSIGVASYPADVSREEELMALADRMLYEAKRAGRNR 445 >UniRef50_A3K3F2 Intracellular signaling protein (PAS,GAF,GGDEF domains) n=1 Tax=Sagittula stellata E-37 RepID=A3K3F2_9RHOB Length = 487 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/178 (35%), Positives = 106/178 (59%), Gaps = 12/178 (6%) Query: 196 ATKLAEHKR--RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 A +LA+ ++ L+ +T+D +TG + R + + N F RR++ A+L++ID+DHFK Sbjct: 281 AQQLAQERQIAALERAATQDWLTGAGSSRQFRHDIENVFRTVRRNDAQASLILIDVDHFK 340 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 SIND +GHD+GD + + R L+ + + + R GG+EFAVI+ G+ A+SA ++ Sbjct: 341 SINDAYGHDMGDRVLTNVARSLETVIGANRRLYRVGGEEFAVILPGSCADSAAIMAEQMR 400 Query: 314 EGLNTLRLPNTPQV-----TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + RL P + ++ S GVA L+P ++ W+K AD+ALY +K GRN+ Sbjct: 401 Q-----RLAEAPDLASDMPSVTASFGVAELDPDITSQDAWVKCADIALYASKNNGRNQ 453 >UniRef50_B0KLS6 Diguanylate cyclase n=2 Tax=Pseudomonas putida RepID=B0KLS6_PSEPG Length = 386 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 113/219 (51%), Gaps = 16/219 (7%) Query: 161 TGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYN 220 T + + ++++ L+ +S+ I +++ A + +E RLQ ++ RD +TG YN Sbjct: 171 TAVEMRYDTSNLKQSISVAIGTATVMMYSIGLVLLAKERSES--RLQHLALRDVLTGTYN 228 Query: 221 RRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLR 280 RR E D R + +IDIDHFK IND +GH GDE + RQLQ LR Sbjct: 229 RRAILERFGVELDRARDQQGSLAVAMIDIDHFKRINDLYGHLAGDEVLCHCVRQLQQRLR 288 Query: 281 GSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT---PQVTLRISVGV-- 335 D +GR+GG+EF +++ GT A+ A+ + E + R P Q+ LR SVG+ Sbjct: 289 QGDSLGRYGGEEFLLLLPGTDRTGAMAALQGLREAIA--RSPARFAGDQIELRFSVGLWC 346 Query: 336 ---APLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 P + S L AD ALY+AK AGRN +AA Sbjct: 347 GVPCPGDSTAS----LLAQADAALYQAKAAGRNTVHMAA 381 >UniRef50_A6Q5K7 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5K7_NITSB Length = 344 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 7/198 (3%) Query: 177 SLPIIVIYPLLFGWVS----YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEF 232 S+ + +I LFGW+ ++ A K + L +ST D +T +YNRR + + Sbjct: 144 SIYLSIIAAALFGWIIEQKLFEFAQKYQQITENLYKLSTTDPLTQLYNRRFFFEECTKKI 203 Query: 233 DNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDE 292 + +R + LL ID+DHFK IND +GH GDE + + + LQ +LRG D++ R GG+E Sbjct: 204 NLAKRKSLPIALLSIDLDHFKQINDQYGHAQGDEILTSFAKILQKSLRGYDIVARMGGEE 263 Query: 293 FAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMS-HYREWLKS 351 FAV + + ++ E N ++ P L +S+G+A P + + ++ L Sbjct: 264 FAVCIIDENLNNVRFIANKILE--NVRKIEVAPSNNLSVSIGIAFSKPHENINLQQLLIQ 321 Query: 352 ADLALYKAKKAGRNRTEV 369 AD ALY+AK+ GR+R EV Sbjct: 322 ADKALYRAKERGRDRIEV 339 >UniRef50_A8L354 Serine/threonine protein kinase n=1 Tax=Frankia sp. EAN1pec RepID=A8L354_FRASN Length = 1726 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/244 (34%), Positives = 127/244 (52%), Gaps = 10/244 (4%) Query: 129 IMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLF 188 ++ + +M GG R + M+ T L GI + + +SL ++Y L Sbjct: 1480 LLAVPIMIRGGLRAMLLLENRMIRGAFATERLEGIMLIAG----QLAVSLDNALVYASLE 1535 Query: 189 GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ +T +LA RRL+ +S D +TG+ NRR E +L E+ R H+ L +ID Sbjct: 1536 RKVAERT-QQLAAANRRLEQLSRTDSLTGLANRRRLEEVLDAEWHRARLHSTPIALAMID 1594 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 IDHFK ND +GH GD + + L +LR + + RFGG+EFAV+M T AE+A+ Sbjct: 1595 IDHFKLYNDHFGHTAGDRCLQRVAAGLAASLRPTHMAARFGGEEFAVVMPDTGAETAVEL 1654 Query: 309 MLRVHEGLNTLRLPNTPQVTLRI---SVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGR 364 ++ + L P+ P V RI S+GVA P +++ AD+ LY+AK+ GR Sbjct: 1655 ARQLRRAVAGLAEPH-PLVIHRIVTVSIGVAATIPDPGDEVAAFVERADIELYRAKRGGR 1713 Query: 365 NRTE 368 +R E Sbjct: 1714 DRVE 1717 >UniRef50_C5T8S9 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8S9_ACIDE Length = 386 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/321 (26%), Positives = 147/321 (45%), Gaps = 22/321 (6%) Query: 70 WLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMI 129 W+ ++ V+PH+ + A RA DPL+ EI N+ D G+W +G + +++ Sbjct: 45 WVPMLAQFVVYPHVVYLRARRAKDPLAAEIQNMLLDNFCFGLWAAALGFPLWIGYMLIIC 104 Query: 130 MCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFG 189 C+N+ + V L + +T+ +TG + +++ L LS+ + Y +LF Sbjct: 105 GCINVTAFRAGKGAVQALAAAALGAALTVAVTGWRFTPDTSLLVSALSMGCLTTYLVLFA 164 Query: 190 WVSYQTATKLAEHKRRLQV---------------------MSTRDGMTGVYNRRHWETML 228 ++ LA + +L+ + RD +TG+YNRR+ T L Sbjct: 165 RGAHTRTVVLANTRAQLRQSQAQLQSQLQAVQSLQAQLTEQANRDPLTGLYNRRYLNTAL 224 Query: 229 RNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRF 288 E D +L++D+DHFK IND GH GD+ + + L R +D+ R+ Sbjct: 225 PRELDASAGAGLPLAVLLMDLDHFKLINDRLGHAAGDDVLCQVAALLLEGTRANDICCRY 284 Query: 289 GGDEFAVIMSGTPAESAITAMLRVHEGLNTLR-LPNTPQVTLRISVGVAPLNPQMSHYRE 347 GG+EF +++ G ++A+ + + + + V + +SVGVA Sbjct: 285 GGEEFLLVLPGMALDAALARAQAFRQKVADRQWCADGQPVAVTLSVGVACTLGAALSPAA 344 Query: 348 WLKSADLALYKAKKAGRNRTE 368 + AD ALY+AK GRNR Sbjct: 345 LIDRADRALYQAKAEGRNRVS 365 >UniRef50_B7IH39 Diguanylate cyclase n=2 Tax=Bacteria RepID=B7IH39_THEAB Length = 167 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 97/165 (58%), Gaps = 3/165 (1%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 ++L+ +S RD +T +YNR +R + N +R+ R +LL++DID FK INDT+GH V Sbjct: 5 KKLKYLSERDQLTDLYNRHKMNEEIRKHYYNFKRYGRPFSLLMVDIDKFKKINDTYGHMV 64 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 GDE + L + L +R +D+ R+ G+EF +++S T E AI ++ + + P Sbjct: 65 GDEVLKKLAKILVKNIRKTDIASRWVGEEFLILLSETDLEQAIEVAEKIRKTIEKESFPK 124 Query: 324 TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 ++T +S+GV + H ++ L D LYKAK++GRNR E Sbjct: 125 DIRIT--VSIGVDSVENH-EHIKDLLILVDEKLYKAKESGRNRVE 166 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 1/171 (0%) Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 H+++L ++T+DG+T + NRR + + E + RRH ++L++D+DHFK IND +GH Sbjct: 208 HEKQLYRLATQDGLTELNNRRQFIELADREIERSRRHGSRMSVLMMDLDHFKDINDHYGH 267 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 VGDE I ++ + LR SD+ GR GG+EFA ++ T + A R+ ++ RL Sbjct: 268 AVGDEVIRHFSQVCREVLRASDLCGRLGGEEFAAVLPDTGLDDARQVAERLRSLASSARL 327 Query: 322 PN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + +S+GVA + + E L AD LY+AK+ GRNR AA Sbjct: 328 SAVSGSLGYTVSIGVAERHADETDIDEVLGRADKQLYQAKRDGRNRVSGAA 378 >UniRef50_A5D1G5 Hypothetical signaling protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1G5_PELTS Length = 343 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/174 (38%), Positives = 96/174 (55%), Gaps = 6/174 (3%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +LA RL+++S D +TG YNRR+ + L E RH +L++IDIDHFK +ND Sbjct: 160 ELARVNSRLELLSITDPLTGAYNRRYIISQLEQELAVAARHGLPLSLIMIDIDHFKKVND 219 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 T GH VGDE + + + L +R +DV+GR+GG+EF VI T + A+ R+ + ++ Sbjct: 220 THGHQVGDEVLKDVVKVLSGCIRTADVLGRYGGEEFVVIAPFTGFQEALVLAERLRDTVS 279 Query: 318 TLRLPNTPQ-VTLRISVGVAPLNPQMSHYRE-----WLKSADLALYKAKKAGRN 365 T + L IS+GV N + HY L AD +YKAK GRN Sbjct: 280 RWPFETTYGFLKLTISLGVTTFNGKEEHYHNSLIDRLLARADEEMYKAKAQGRN 333 >UniRef50_C1F1Q2 Sensory box/GGDEF family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F1Q2_ACIC5 Length = 508 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 4/167 (2%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + L+ +S DG+TGV NRR E L +E+++C R + ++ID+D FK ND GH Sbjct: 318 RAELEHLSYTDGLTGVVNRRALEKALCSEWEHCIRSGSPLSFILIDVDFFKQANDRHGHQ 377 Query: 263 VGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 GDE ++A+ L+ +L R D+IGR+GGDEFA I+ T A +A R+ G+ LR+ Sbjct: 378 AGDEYLIAIAEALRASLHRSIDIIGRYGGDEFAAILPSTDAGAAEIVAERMCHGVRQLRI 437 Query: 322 PNTPQVT--LRISVGVAPLNPQMSHYRE-WLKSADLALYKAKKAGRN 365 N+ T IS+G+A M L +AD ALY AK++GRN Sbjct: 438 ENSATTTGFATISMGIATCLTFMEPTPALLLHTADAALYDAKRSGRN 484 >UniRef50_Q6AL41 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AL41_DESPS Length = 516 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 98/181 (54%), Gaps = 14/181 (7%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +LA+ R+L+ ++ DG+T YN R+++ L E R++ +L++ DID+FK ND Sbjct: 331 ELAKKNRQLETLANIDGLTNCYNHRYFQNALDQELSRSSRNSLAISLIMFDIDNFKRFND 390 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 ++GH GD + LTR +Q +R DV+ R+GG+EF +I+ T E A+ +V Sbjct: 391 SYGHQAGDFILCELTRLIQEQIRKDDVLARYGGEEFVIILPETEKEDALIVAEKVRHACE 450 Query: 318 TLRLPN---TPQVTLRISVG------VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 N T Q+T+ + V ++PLN ++ DLALY AK+ GRN+ Sbjct: 451 EHSFQNIHKTHQITISLGVATEHSAQISPLNKT-----SFIDKTDLALYSAKENGRNKVV 505 Query: 369 V 369 V Sbjct: 506 V 506 >UniRef50_A8EWQ0 GGDEF/HAMP domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWQ0_ARCB4 Length = 581 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 106/176 (60%), Gaps = 2/176 (1%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 V +T LA+++ L+ +S D +T +YNR + L++E + +R+N + +++++DID Sbjct: 402 VKQRTEELLAKNEELLK-LSITDNLTKLYNRVKLDKSLQDEINRSQRYNTNFSIILLDID 460 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 +FK +ND +GH +GDE ++ + L +R D++GR+GG+EF VI T E AI Sbjct: 461 YFKKVNDNFGHQIGDEVLIESAQVLSKNIRNVDILGRWGGEEFLVICPETKIEDAIKVAS 520 Query: 311 RVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 ++ + + P T+ IS+GVA + + + + + +AD ALY+AK+ GR++ Sbjct: 521 HINAAIKLHKFTTYPN-TVTISLGVATFSKHIKNVDDIILNADKALYQAKEEGRDK 575 >UniRef50_C6P353 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P353_9PROT Length = 727 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 2/163 (1%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 L+ ST D +TG++NRRH+ ML E D RHN + ++L++D+D FK INDT+GH G Sbjct: 302 ELEYYSTHDPLTGLHNRRHFNEMLEYEIDRSERHNHEFSILMLDLDDFKDINDTYGHPCG 361 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA--ITAMLRVHEGLNTLRLP 322 D + A++ ++ T+R D+ R GGDEFA+I++ T E A + LRV + P Sbjct: 362 DATLCAVSEIVRSTMRKGDLTTRIGGDEFAIILTETSQEGAREVAEKLRVALRDHKFEAP 421 Query: 323 NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 N S+G+ + + + D+ LY+AK G++ Sbjct: 422 NGKTFHTTTSIGLIAYPKDAQNISDLMAGVDIGLYRAKSIGKD 464 >UniRef50_C1SJG2 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJG2_9BACT Length = 434 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 61/179 (34%), Positives = 106/179 (59%), Gaps = 3/179 (1%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 +S+ T L + K+ +++S +D +T +YNR + + E D R+ +D ++L+ID+D Sbjct: 249 ISFADVTLLEKEKQIYRMLSQQDPLTKIYNRTKFFEEVEKELDRVSRYGQDMSILMIDVD 308 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 +FK +ND +GH VGD+ ++ LT+ ++ +R SDV R+GG+EFA++M T + A Sbjct: 309 YFKEVNDQYGHLVGDKVLIELTQIIRQNIRKSDVFARYGGEEFALLMPMTAQKGAREKAD 368 Query: 311 RVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + E ++T +VT S GVA + +++ AD+ALY AK++GRN +V Sbjct: 369 LIREAVSTHNFDKCGRVTC--SFGVATY-AEGDTVDSFVQKADIALYNAKESGRNMVQV 424 >UniRef50_UPI0000E11028 response regulator receiver modulated diguanylate cyclase n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E11028 Length = 323 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 98/202 (48%), Gaps = 6/202 (2%) Query: 166 SFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWE 225 F ++P L ++ LFG + E +LQ S D +TG+ NRRH++ Sbjct: 110 DFLASPFNKELVEAKLIATNRLFGLRKSHS-----EQYNQLQKESLTDVLTGISNRRHFK 164 Query: 226 TMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVI 285 +L+ E +RH+R + D+DHFK+IND GHD GDE + ++ + TLR D Sbjct: 165 DILKKEMVKAQRHDRAMCIAYFDLDHFKAINDGLGHDAGDEVLRKVSSAISETLRAEDSF 224 Query: 286 GRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSH 344 GR GG+EF + M T A+ R + L + N + + S GV P + Sbjct: 225 GRLGGEEFCICMPDTSLNEALIPSERYRLMIEKLTIEYNNKPINVTASFGVTEFKPFLHD 284 Query: 345 YREWLKSADLALYKAKKAGRNR 366 L AD ALYK+K GRN+ Sbjct: 285 INSLLAHADEALYKSKHQGRNQ 306 >UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D632_MYXXD Length = 710 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 98/170 (57%), Gaps = 3/170 (1%) Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 A+ +++ M+T DG+TG+YN R ++ RR+ R +L++ D+DHFKS+NDT+ Sbjct: 523 AQLYEQMERMATTDGLTGLYNHRTFQAKADEVLAQSRRYQRKFSLILTDVDHFKSVNDTY 582 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH GD+ + + R ++ R +D++ R+GG+EF +IM T A+ A T R+ E + Sbjct: 583 GHPTGDQVLKGVARIIKTMARDTDIVARYGGEEFVIIMPETDAKGAFTISERIREAVKA- 641 Query: 320 RLPNTPQVTLRI--SVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + T LRI S+G+A ++ + AD LY +K+ GRN++ Sbjct: 642 EVFQTEMGPLRITMSLGIATFPDSAMEKQQLIDLADQCLYHSKRNGRNQS 691 >UniRef50_Q15XV6 Diguanylate cyclase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XV6_PSEA6 Length = 350 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 13/183 (7%) Query: 192 SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 S++ +L +R L+ +S D +T +YNR ++ N + + RH + LLIID DH Sbjct: 165 SFEIEIELQAQRRELETLSQTDALTSIYNRGYFNQYFENLWHHATRHKIEIALLIIDADH 224 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGT-PAES----- 304 FKS+NDT+GH GD ++ L + + R +D+ R+GG+EFA+++SG P +S Sbjct: 225 FKSVNDTYGHLGGDACLIHLAHAINKPINRATDIAVRYGGEEFAILLSGCNPQQSKKMAD 284 Query: 305 AITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAG 363 AI ++ H+ + ++ + +S+G+A L P E ++ AD ALY+AK G Sbjct: 285 AIMQSIQQHKFVY-----QDSEIPITVSIGIATLVPSPHQKSNELIEQADSALYRAKATG 339 Query: 364 RNR 366 RNR Sbjct: 340 RNR 342 >UniRef50_D2BVZ5 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech586 RepID=D2BVZ5_DICD5 Length = 514 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 9/172 (5%) Query: 202 HKR--RLQVMSTRDGMTGVYNRR-HWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 HKR RL + D ++G+ NRR E+M + R + +++ IDIDHFKSIND+ Sbjct: 336 HKRIGRLSSEAHTDPLSGMLNRRGMLESM-----EEIRGEYKKVSVIAIDIDHFKSINDS 390 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL-N 317 +GHDVGD I L++Q++ R +D++ R GG+EF +++ G A R+ + N Sbjct: 391 FGHDVGDMVIRKLSQQIRKNFRKTDLVCRIGGEEFLILLPGADIHVATVIAERLRNNVAN 450 Query: 318 TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 T+ +P + + IS+GV NPQ S +K+AD ALYKAK GRN+ V Sbjct: 451 TVYVPGSQHHQVTISIGVTTFNPQKSALDIAIKTADNALYKAKNGGRNQVVV 502 >UniRef50_B2T0U2 Diguanylate cyclase n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T0U2_BURPP Length = 373 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 4/172 (2%) Query: 199 LAEHKRRLQV--MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 +A H+ +++ +TRD +TGV+NRR + + + E+ +R LLI+D+DHFK+IN Sbjct: 191 VATHRLNMELKWYATRDPLTGVFNRRAFAEIYQREYQVAQRTGGTLALLIVDLDHFKAIN 250 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 D +GHDVGD+ +V R+ L + R GG+EFAV++ G E A R+ L Sbjct: 251 DKYGHDVGDKVLVDFCRRANAVLVNGTSMARLGGEEFAVLLRGVSLEDASAQAERIR--L 308 Query: 317 NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + L+ + SVGVA S + L+ AD ALY AK+ GRNR E Sbjct: 309 SLLQDGDNELPGYTCSVGVATTAKDGSALEQLLRVADDALYHAKREGRNRVE 360 >UniRef50_C5S9H9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9H9_CHRVI Length = 559 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/172 (40%), Positives = 106/172 (61%), Gaps = 2/172 (1%) Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 AE R L+ + RD +TG++N +L+ +C+R R L +ID+DHFK++NDT Sbjct: 383 AERMRTLRSLMIRDSLTGLFNHNTILQLLKVAMASCQRSGRLLCLAMIDVDHFKAVNDTH 442 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH GD+ ++AL R L++ LR SD++GR+GG+EFAVIM+G A+ A T M + E + Sbjct: 443 GHPTGDQVLMALGRTLRLRLRESDIVGRYGGEEFAVIMTGLDADQAKTIMDSLRESFAAV 502 Query: 320 R-LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + + S G+A P+ S +++AD ALY+AK+AGRNR +A Sbjct: 503 TFIADGTEFHCTFSGGLAAF-PEYSDPSALIEAADAALYRAKRAGRNRILIA 553 >UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain protein) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9W6_SHEAM Length = 557 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 94/297 (31%), Positives = 152/297 (51%), Gaps = 17/297 (5%) Query: 81 PHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGP 140 PHL++ + AV ++ + + TD G+ V + L+ + L G Sbjct: 271 PHLSYIVLGLAVLMMTVQGVAMTTDDRELGLIFAFDFVYIFTLLMPLLGILAWLHGLPTA 330 Query: 141 RLFV-AGLVLMVVSCLVTLELTGITVSFNSAPLEW-WLSLPIIVIYPLLFGWVSYQTATK 198 RLF+ A L MV SC L + G +SFN +W + + I + + ++ + Sbjct: 331 RLFLLASLSTMVGSCTTGLAVEGY-ISFN----QWTYRAAEIGMFIDAMLLALALAAQFR 385 Query: 199 LAEHKRRL-QVMSTRDGMTGVYNRRHWETMLRN--EFDNCRRHNRDATLLIIDIDHFKSI 255 +E +R L Q ++ D +TG+ NRR + L+ D+ RR L++IDID FKSI Sbjct: 386 QSEQERVLAQQLAATDPLTGIANRRAFSEQLQRLWHLDSQRRCR---ALIMIDIDRFKSI 442 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT GH+VGD+ + + R ++ ++R D GR+GG+EF V+++ E A R+ Sbjct: 443 NDTLGHEVGDKVLTDIARVIRYSIRNRDQCGRWGGEEFVVLLASASEEEAGIIAERIRHN 502 Query: 316 LNTLRLPNTPQVTLRI--SVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + +L P P L++ SVGV L+ S + + L+ AD A+Y AK AG NR ++A Sbjct: 503 IESLSFP-APANKLKVTASVGVC-LDEGHSRHEDILRRADEAMYHAKDAGGNRVKLA 557 >UniRef50_C6P3N4 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3N4_9PROT Length = 387 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 81/235 (34%), Positives = 121/235 (51%), Gaps = 11/235 (4%) Query: 141 RLFVAGLVLMVV----SCLVTLELTGITVSFNSAPLEWWLSLP--IIVIYPLLFGWVSYQ 194 RL +AG+ ++VV LV + I + + W+ + + V+ L G + + Sbjct: 152 RLLLAGIAIVVVVLGLRSLVAMSGQFILAQPETGGVPNWVQVLSFVAVMASSLLGSIGFL 211 Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 K + L + T D +TGV NRR M E +R R LL+ID DHFK Sbjct: 212 LMVKERTDREVLHLAMT-DSLTGVPNRR--ALMDYAERAMAQRGGRSVALLMIDADHFKR 268 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 INDT+GH VGDE + LTR LQ LRG D++GR+GG+EF V+ AE A+ + E Sbjct: 269 INDTYGHPVGDEVLRQLTRLLQQRLRGGDLLGRYGGEEFCVVAPDADAEGALKLAESLRE 328 Query: 315 GLNTLRLPNTP-QVTLRISVGVAPLNPQMSH-YREWLKSADLALYKAKKAGRNRT 367 + + L ++++ +S+G+A ++ L AD+ALY AKK GRN+ Sbjct: 329 SVASAVLDTEQGKLSITVSIGIAHSTADAGRALKDILAEADIALYSAKKGGRNQV 383 >UniRef50_Q47MR9 GGDEF n=2 Tax=Streptosporangineae RepID=Q47MR9_THEFY Length = 448 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/164 (39%), Positives = 91/164 (55%), Gaps = 1/164 (0%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 ++LQ + D TG+ N WE + + E R +LIIDIDHFK +NDT GH V Sbjct: 259 QQLQTAARTDPKTGLLNAVAWERVAKTELTRALRTGCPLAVLIIDIDHFKKVNDTHGHLV 318 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP- 322 GD+ ++ + L LR DVIGRFGG+EF V++ G A R+ + + P Sbjct: 319 GDQVLLNVATMLSQQLRPYDVIGRFGGEEFVVLLPGADMAEACRTAERLRTQVGRMAQPI 378 Query: 323 NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 N +T+ +S+GVA L E + +ADLALY+AK +GR+R Sbjct: 379 NDITITVTVSIGVALLRVHGRDLLELMAAADLALYRAKDSGRDR 422 >UniRef50_C1F0W3 GGDEF domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F0W3_ACIC5 Length = 367 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/193 (37%), Positives = 108/193 (55%), Gaps = 7/193 (3%) Query: 181 IVIYPLLFGWVSYQTAT---KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRR 237 ++IY L +++ A L+ + L++M+ DG+TG+ NRR +E +LR+E + Sbjct: 159 LLIYLSLITGLAFIAAIMWLSLSAQRDELRLMAETDGLTGLLNRRAFEEILRHELRSLDG 218 Query: 238 HNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIM 297 D LL++DID FK+IND GH GDE I ++ ++ R SDV+ RFGGDEF V++ Sbjct: 219 SKADTALLLLDIDQFKTINDDLGHLAGDEVIRRVSTAIKTAARPSDVLARFGGDEFVVLL 278 Query: 298 SGTPAESAITAMLRVHEGLNTLR-LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLAL 356 A+ R + L+ LPN +T+ SVG+A L+ S Y + AD AL Sbjct: 279 RHLNGLQAMAVAERFRFEIAALQGLPN--HLTITASVGLAFLHGMDSPY-SLIGRADEAL 335 Query: 357 YKAKKAGRNRTEV 369 Y++K GRNR V Sbjct: 336 YRSKSNGRNRVSV 348 >UniRef50_Q31E96 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E96_THICR Length = 775 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 3/173 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 QT KL E ++L ++S D +TGVYNR++ + L +E + R+ +++++D+D+FK Sbjct: 600 QTQKKLQETNKQLSILSVTDHLTGVYNRQYLDQRLDSEVERVNRYGSTFSVIMMDLDNFK 659 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +ND +GH VGDE +V + ++ +R D+ GR+GG+EF +I TP AI +V Sbjct: 660 KVNDKFGHLVGDEVLVVFAQTVEKEIRKIDIFGRWGGEEFILICPETPLTHAIQLGKKVR 719 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + + + P ++ +S+GVA + + L AD LYKAK+ GRN+ Sbjct: 720 KSIESQDYPEN--ISQTVSLGVAEYQTGEA-INDCLNRADQNLYKAKQLGRNQ 769 >UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SM80_AERS4 Length = 432 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 109/192 (56%), Gaps = 7/192 (3%) Query: 181 IVIYPLLFGWVSYQTAT--KLAEHKR---RLQVMSTRDGMTGVYNRRHWETMLRNEFDNC 235 + I + G + TA ++E R L+V +T D +TG+ NRR ++ +++ E C Sbjct: 231 VTIAKINLGQTTEMTAILRDISERARLVEELKVAATTDPLTGIANRRRFDELVKQEVQRC 290 Query: 236 RRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAV 295 +R +LL++DIDHFK +NDT GH GD+AI++L R++ LR D++GR+GG+EF + Sbjct: 291 QRFGHTMSLLLLDIDHFKQVNDTHGHQQGDQAILSLVRRIAKQLREVDILGRWGGEEFII 350 Query: 296 IMSGTPAESAITAMLRVHEGLNTLRLP--NTPQVTLRISVGVAPLNPQMSHYREWLKSAD 353 ++ T + A + R+ + + P ++ L +S+G++ + ++ AD Sbjct: 351 LLPETSLDLAWASAERIRLAIASESHPLGADIEIPLTVSIGISASQGPQDNVDNMVRRAD 410 Query: 354 LALYKAKKAGRN 365 ALY AKK GRN Sbjct: 411 TALYLAKKQGRN 422 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/178 (38%), Positives = 104/178 (58%), Gaps = 4/178 (2%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 A +L + ++ L ++T DG+T VYNRR + L E + +R +L+++DIDHFK + Sbjct: 252 ANQLEQSQQDLYRLATLDGLTEVYNRREFNRWLLVEIERSQRGEHPVSLIMVDIDHFKRL 311 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIM-SGTPAES-AITAMLRVH 313 NDT+GH GD A+ + + LQ +R D++ R+GG+EF VI+ T A+S I +R+ Sbjct: 312 NDTYGHQAGDLALCEVAQLLQREVRPGDIVCRYGGEEFGVILPKATSADSWVIAERIRLA 371 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWL-KSADLALYKAKKAGRNRTEVA 370 ++ LP+ + + S+GVA P + +E L K AD ALY AK GRNR A Sbjct: 372 IAEKSVVLPSQQHIDMTASLGVATY-PDHADCKERLVKQADQALYTAKYQGRNRVHSA 428 >UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geobacter RepID=C6E9C6_GEOSM Length = 713 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 3/173 (1%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 T++ E R + +S D +TG+YNRR + L E + R + T++ ID+D FK+ N Sbjct: 500 TEVLEESERFEQLSVTDALTGLYNRRFLKNRLEEELNRSIRQGLNLTVIFIDLDFFKNYN 559 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 D GH GD+A+ ++ +LR D++ R+GG+EF ++ GT A+ R+ + Sbjct: 560 DLCGHLAGDDALRITAEIIKASLRDMDIVARYGGEEFCAVLPGTSKVEAMIVAERIRSEI 619 Query: 317 NTLRLP---NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + P PQV L S+GVA + + ++D+ALY+AK GRNR Sbjct: 620 EREKFPGESEIPQVRLTASLGVASFPEDGRTFTALVHASDVALYEAKAGGRNR 672 >UniRef50_A6VWM3 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VWM3_MARMS Length = 365 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 95/186 (51%), Gaps = 2/186 (1%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 F V +L L+ ++ D +TG+ NRR N F + + I+ Sbjct: 176 FAMVINLVIKRLKSVNSHLRTLAEMDELTGLSNRRKVLADAVNIFADSVINRESCVFAIV 235 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 D+DHFK INDT+GH+ GD + ++ + +R D IGR+GG+EF VIM T + A Sbjct: 236 DLDHFKKINDTFGHEAGDLVLAKVSAMMASVIRSQDEIGRYGGEEFIVIMPDTSLKDAEV 295 Query: 308 AMLRVHEGLNTLRLPNTPQVTL--RISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 M R+ + + + + + + +S+GVA + P +S Y E L AD LY AK+ GRN Sbjct: 296 VMERMRQSVENMLIETEHGIVIPVTVSIGVAAIAPSVSRYEEILAQADKGLYTAKRNGRN 355 Query: 366 RTEVAA 371 R V + Sbjct: 356 RVSVQS 361 >UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLJ7_DESAH Length = 576 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 104/182 (57%), Gaps = 6/182 (3%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 +T +L ++LQ + T DG+T + NRR ++ L E+ C+R +LL+ DID+FK Sbjct: 388 ETQKRLETANQKLQTLVTSDGLTMIANRRKFDEYLDQEWQRCKRAKVWLSLLMCDIDYFK 447 Query: 254 SINDTWGHDVGDEAIVALTRQLQIT-LRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 NDT+GH GD+ + + + ++ T +R D++ R+GG+EFAVI+S T A R+ Sbjct: 448 HYNDTYGHQAGDDCLRKIAQAMEKTVVRPMDLVARYGGEEFAVILSDTGLNGACHVARRI 507 Query: 313 HEGLNTLRLPNTP---QVTLRISVGVAPLNPQMSHYREWL--KSADLALYKAKKAGRNRT 367 E + L + ++ + +S+G+ L P L K+AD ALYKAK+ GRNR Sbjct: 508 QEDVKNLNIAHSESSVSTHVTLSIGITCLIPDDEDLSMDLLIKTADEALYKAKRKGRNRM 567 Query: 368 EV 369 E+ Sbjct: 568 EL 569 >UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLA2_9GAMM Length = 811 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 3/163 (1%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L ++T D +T + NRR + T L E +R++R+ +L ++D+DHFK IND GH GD Sbjct: 637 LHRLATTDELTSLANRRKFLTTLEAELARAKRYHRELSLCMLDLDHFKRINDDNGHSAGD 696 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP 325 +V + + ++ LR SD+ GR GG+EFA+++ T + A+ R+ E + +L + Sbjct: 697 SVLVEVAKIMEAMLRESDMAGRIGGEEFAILLPDTSEDDALILAERLREAIESLEIKYQA 756 Query: 326 Q-VTLRISVGVAPLN--PQMSHYREWLKSADLALYKAKKAGRN 365 + L S+GVA LN P++ E L +AD +Y AK+ GRN Sbjct: 757 HTLKLTTSIGVASLNQMPEIVQASELLSAADDCMYYAKQNGRN 799 >UniRef50_A8UVA1 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVA1_9AQUI Length = 711 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 102/175 (58%), Gaps = 4/175 (2%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 +A L E+ R ++ +TRD +TG+YN+R + +L E + +R +L+ID+D+FK Sbjct: 283 SAKALEEYARNIEYYATRDPLTGLYNQRVFWELLEYEIERAQRRGYSFAVLMIDLDNFKV 342 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 INDT+GHD GD+ + + ++ T R D++ R+GGDEF VI+ E A+ + R E Sbjct: 343 INDTYGHDFGDKFLREFAKLMRKTFRREDIVARYGGDEFVVILPYASEEEALRSARRFIE 402 Query: 315 GLNTLRL--PNTPQVTLRISVGVAPLNPQMSHY-REWLKSADLALYKAKKAGRNR 366 L+ + P+ + +S+G+A L PQ +E +AD +Y+AK G++R Sbjct: 403 ELDNFYVEAPDGKPIKATVSIGIA-LYPQHGESTQELFLTADNIMYRAKAEGKSR 456 >UniRef50_A5VC79 Diguanylate cyclase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VC79_SPHWW Length = 408 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 89/163 (54%), Gaps = 3/163 (1%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 RL++M+ D +TG+ NRR + R F R R +L +ID+D+FK+IND WGHD G Sbjct: 226 RLRIMADTDELTGLANRRCFLERARTAFGTARSRERPFSLCMIDVDNFKAINDGWGHDCG 285 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 D + + T R D +GRFGG+EF + G A R+ E + LRL Sbjct: 286 DAVLREVAAACLRTFREGDAVGRFGGEEFVAALPGADMADARRIAERLRETIAGLRL-EA 344 Query: 325 PQVTLRISV--GVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 P LR++V G+A + P + LK AD ALY+ K++GRN Sbjct: 345 PLADLRVTVTIGLAEVEPLETSLAPALKRADAALYQGKRSGRN 387 >UniRef50_B5YAJ1 Ggdef domain protein n=2 Tax=Dictyoglomus RepID=B5YAJ1_DICT6 Length = 559 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/172 (42%), Positives = 98/172 (56%), Gaps = 7/172 (4%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L EH +L S D +TGVYN+R + +L NE + R+NR +L+ IDIDHFK+INDT Sbjct: 386 LYEHTEKL---SYVDPLTGVYNKRKIDEILENEVNRALRYNRPLSLIFIDIDHFKNINDT 442 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA--ITAMLRVHEGL 316 +GH +GD + L L R D IGRFGG+EF I+ T ESA + LRV + Sbjct: 443 YGHIIGDSFLKELALFLLRNTRNIDTIGRFGGEEFVCILPETDLESAYKVGEKLRVRWNI 502 Query: 317 NTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 +P + +S+G++ L + RE L AD ALYKAKK RN+T Sbjct: 503 ERHIIPIKIDEKIGTLSMGISNLPTHSKNARELLILADNALYKAKKE-RNKT 553 >UniRef50_B6BHU7 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHU7_9PROT Length = 774 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 9/208 (4%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKL-----AEHKRRLQVMSTRDGMTGVYNRR 222 N P+ WL++ +++ +LF + KL E +R+LQ +S D +T +YNRR Sbjct: 562 NYKPILQWLAVIMLIFSSILFIILRINKKLKLEIRTRKETERKLQEISITDELTHLYNRR 621 Query: 223 HWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RG 281 ++ ++ +R + + I+DID+FK NDT+GH GDEA+ + +Q +L R Sbjct: 622 YFNKKFPQLINSAKREKKHVSFAILDIDYFKLYNDTYGHISGDEALQKIAESMQSSLSRA 681 Query: 282 SDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP---NTPQVTLRISVGVAPL 338 D R GG+EF ++ G E ++ + +V + + L++ NT + S G+ Sbjct: 682 DDYCFRLGGEEFGILFKGLDKEQSLELIEQVRQNIENLKIEHANNTASQYVTSSFGLVVK 741 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNR 366 + +++ E + AD LYKAK GRNR Sbjct: 742 DSAITNEEELYREADDLLYKAKDGGRNR 769 >UniRef50_Q30YD1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30YD1_DESDG Length = 751 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 69/184 (37%), Positives = 104/184 (56%), Gaps = 7/184 (3%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 +V+ + ++ H+RRL ++ D +TG++NRR + + E RR R L+IDI Sbjct: 567 YVTARDISRQKAHERRLHEQASTDELTGIFNRRRVLDIGKAEMARSRRFGRPLACLMIDI 626 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 DHFK INDT+GH GD + +T L LR SD +GR GG+EF V M T AE A+ Sbjct: 627 DHFKQINDTYGHVAGDAVLRGVTATLSAGLRQSDTLGRLGGEEFIVFMPETDAEGAMHTA 686 Query: 310 LRVHEGLNTLRL-----PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 R+ + + + +P +T +S+GV L P+ + ++ +AD ALY+AK+ GR Sbjct: 687 ERLRQAVEQSSVLMDGEGASPGIT--VSLGVTVLAPETASLDAFIAAADAALYRAKENGR 744 Query: 365 NRTE 368 NR E Sbjct: 745 NRVE 748 >UniRef50_C7R8C4 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8C4_KANKD Length = 700 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 98/173 (56%), Gaps = 3/173 (1%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 ++L RL+ MS D +T +YNRR +E F R+ T ++DIDHFK +N Sbjct: 522 SELIAMNERLEKMSVEDELTKIYNRRGFEAAANEAFKLACRNRTALTFAMLDIDHFKRVN 581 Query: 257 DTWGHDVGDEAIVALTRQL-QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 DTWGH VGDE IV + ++L ++ LR +D R+GG+EF V+++G + + ++ + Sbjct: 582 DTWGHVVGDECIVMVAKELKKVFLRETDFYARYGGEEFVVLLTGGNTDKHCRMLEQLRKD 641 Query: 316 LNTLRLP-NTPQVTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNR 366 + ++ + ++L +S+GV L + Y + + AD LY++K GRNR Sbjct: 642 IENHKVAVDGENISLTVSIGVFSLKEDFNISYHQLVSKADKLLYQSKTEGRNR 694 >UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZ07_SHESH Length = 298 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 118/204 (57%), Gaps = 12/204 (5%) Query: 174 WWLSLPIIVIYPLLFGWV----SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLR 229 + L +PII +F +V S +T + ++ L+ + D + G++NRR+ + L+ Sbjct: 72 FDLVVPIIFFGGAIFVFVVCSLSLRTTRDIMQN-YALKQENITDSLMGIFNRRYLDRRLK 130 Query: 230 NEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFG 289 +E + +++ ++ +IDIDHFK +ND +GH VGD + + + ++ +LR SDV+ RFG Sbjct: 131 DETERALNYSQPLSIFLIDIDHFKQVNDNYGHQVGDLVLKNIAQLIKHSLRESDVLARFG 190 Query: 290 GDEFAVIMSGTPAESAITAMLRVHEGLNTLRL-------PNTPQVTLRISVGVAPLNPQM 342 G+EF VI+ T ++ T R+ + +L ++ +++ +S+GVA LN Q Sbjct: 191 GEEFVVILPRTKDSTSYTLAERLRHVVEDFQLTLPEESDKDSLSISVTVSIGVAGLNAQC 250 Query: 343 SHYREWLKSADLALYKAKKAGRNR 366 + +++AD ALY+AK+ GRN+ Sbjct: 251 KDCQCLIENADRALYQAKRNGRNQ 274 >UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXG9_HALOH Length = 499 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 5/169 (2%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 ++ + M+ RDG+TG+YN +++ L +H TL+I+DID+FK +ND +GH V Sbjct: 334 KKQEEMANRDGLTGLYNHAYFQNRLHLLLKQENKH--PLTLIIMDIDNFKQVNDRFGHLV 391 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA--ITAMLRVHEGLNTLRL 321 GD+ + L L+ LR D+I R+GG+EFA+I+ T + I LR N + L Sbjct: 392 GDKVLKELAHLLKHNLREGDLIARYGGEEFAIILPETELKQGEFIAKRLRKLISDNEIVL 451 Query: 322 PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 N + + +S+GVA N + S E++ AD ALYKAK+AG+NR +A Sbjct: 452 DNNRSLYITVSIGVAQYNKKWSQ-EEFIDKADQALYKAKEAGKNRVTLA 499 >UniRef50_C8X3T4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3T4_DESRD Length = 324 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 96/166 (57%), Gaps = 1/166 (0%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 TK + LQ S RD +TGVYNR + N +R+ R +LL++D+D FK +N Sbjct: 139 TKRKKLFEELQAQSERDALTGVYNRLAFTRYFDQYKYNAQRYRRPLSLLVLDLDEFKGLN 198 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 D +GH GD + +L L+ LR +D++ R GGDEFA+++ TP +A+ M R+ + L Sbjct: 199 DRFGHAAGDVVLQSLAEALRSRLRQTDILARLGGDEFAILLPETPYGAAVELMGRLRKAL 258 Query: 317 NTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKK 361 N + +P + ++ +R+S+GV+ L+ + E AD +YK K+ Sbjct: 259 NAMIVPFESEEIPVRVSLGVSTLSLTDKEFEELFARADANMYKHKR 304 >UniRef50_A6T2S6 Putative uncharacterized protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T2S6_JANMA Length = 352 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 63/172 (36%), Positives = 99/172 (57%), Gaps = 7/172 (4%) Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 + RLQ + D +TGV NRR+ E L E +RH + + ID+DHFK +ND +GH Sbjct: 176 NNERLQHIGLTDPLTGVNNRRYVERRLLEEVGRTQRHGYALSGMYIDLDHFKKVNDNFGH 235 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT--L 319 GDE + + +++ LR SD +GRFGG+EF V++ P ++A+ R+ ++ + Sbjct: 236 QGGDEVLCEVANRIKAELRLSDALGRFGGEEFVVLLIDAPLDAALVVAERIRASVSERPI 295 Query: 320 RLPNTPQVTLRISVGVAPLN-----PQMSHYREWLKSADLALYKAKKAGRNR 366 L + ++ +S+GVA LN + ++ L ADLALY+AKK GRN+ Sbjct: 296 VLSSGEELRATVSIGVASLNTADRQDSAAVAQQLLAKADLALYQAKKEGRNK 347 >UniRef50_A8GGC9 Diguanylate cyclase n=1 Tax=Serratia proteamaculans 568 RepID=A8GGC9_SERP5 Length = 516 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 104/178 (58%), Gaps = 5/178 (2%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 +T +L R L+ ++ DG+TG+ NRR ++ L+NE R+ R LL++DID+FK Sbjct: 335 RTRDQLTSINRTLEELALLDGLTGLANRRQFDIALKNELMRASRNYRSVALLMLDIDYFK 394 Query: 254 SINDTWGHDVGDEAIVALTRQLQ-ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 ND +GH GD+ + + + L+ + R +D++ R+GG+E A+I+ T A+ A+ RV Sbjct: 395 QYNDIYGHVAGDQCLQQIGQMLKGMASRSNDIMARYGGEEMAIILPDTDAQGALIFAERV 454 Query: 313 HEGLNTLRLPN--TPQVTLRISVGVAPLNPQMSHYR--EWLKSADLALYKAKKAGRNR 366 E + L++P+ P + IS+G+ P M + ++ AD ALY+AK G+NR Sbjct: 455 IEAVRELKIPHDGNPHGVITISIGIYAKVPHMYNDTPMSFINQADSALYQAKAQGKNR 512 >UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTU0_9FIRM Length = 491 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 62/172 (36%), Positives = 97/172 (56%), Gaps = 7/172 (4%) Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 A H R+++ + DG+TG+YN R+++T+ EF R+ R +LL+IDID+FK NDT+ Sbjct: 311 ANHVSRVELQAITDGLTGLYNYRYFQTLFEREFKRAVRYKRPLSLLMIDIDYFKLYNDTY 370 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH GD I + + ++ R D++ R+GG+EFAV+ T + A R+ + Sbjct: 371 GHRQGDHIIRTIAKIIRQNCRDVDIVVRYGGEEFAVLFPETTVDEAFKIAERIRMAVAEY 430 Query: 320 RLPNT---PQVTLRISVGVA--PLNPQMSHYREWLKSADLALYKAKKAGRNR 366 N P L +S+GVA P + Q E + AD+ALY+AK+ +NR Sbjct: 431 PFANKHSQPGGILTVSMGVAGYPYDAQSE--TELIDHADMALYRAKRTSKNR 480 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 66/179 (36%), Positives = 103/179 (57%), Gaps = 7/179 (3%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 A +L + ++VMS D +T ++NRRH+ET L E R+ +L+I+DIDHFK + Sbjct: 233 ARRLTKAYETIEVMSITDELTRLHNRRHFETRLAEEISRSLRYGSPMSLMILDIDHFKRV 292 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 ND +GH GD + L+ +R +DV R+GG+EF VI++ + A A +V Sbjct: 293 NDNYGHQAGDWVLTQFATLLKDNVRKADVPARWGGEEFVVILTESTISQARMAAEKVRRN 352 Query: 316 LNT--LRLPNTPQVTLRISVGVAPLN----PQMSHYREWL-KSADLALYKAKKAGRNRT 367 + + +P+ + + +SVGVA L+ +M + L K+AD ALY+AK+ GRNRT Sbjct: 353 VESAEFNIPDGRSIPVTVSVGVASLDMISGDEMGSEADVLVKTADDALYRAKQEGRNRT 411 >UniRef50_Q07YS7 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07YS7_SHEFN Length = 548 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 99/167 (59%), Gaps = 3/167 (1%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L + +L+ ++++D +T +YNRR + ++ E +RH+ TL+I+DIDHFK IND Sbjct: 380 LNQQNEKLEQLASKDPLTLLYNRRAFSALVDKEISRAKRHHFPITLVILDIDHFKKINDE 439 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 +GH+VGD+ + +L + +R ++I R+GG+EF +++ + + V + ++ Sbjct: 440 FGHNVGDDILCRFADELSLNMRKENLICRWGGEEFVILIPEATSTMVFKHIEEVRQKISQ 499 Query: 319 LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 + +P L S G+A L + ++EW + AD ALY+AK AGRN Sbjct: 500 MSF--SPVEKLTFSAGIATLRVE-EPFKEWFQRADSALYQAKGAGRN 543 >UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD98_LEGLO Length = 721 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 30/236 (12%) Query: 159 ELTGITVSFNSAPLEWWLSLPIIV---IYPLLFGWVSYQTATKLAEHKR----------- 204 EL V+ +S +L +P++ IY LL+ VS + A +++++ Sbjct: 461 ELICNHVNVSSEQALSYLCIPLMAQNDIYGLLYMEVSEEPAGAFSQNQQLLITAFSELTA 520 Query: 205 ----------RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 L+ S RD +TG+YNRR+ E L + R +LL++D+DHFK Sbjct: 521 LAFANVRLRENLRYQSMRDPLTGLYNRRYLEDFLLKQIHQSERTKSPISLLMLDLDHFKK 580 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 INDT+GHD GD A+ L + LQ +R D+ R+GG+EF V T ++ T + E Sbjct: 581 INDTYGHDAGDVALKELGKILQEDIRVGDIAARYGGEEFIVAFYNTDEKTIKTRAESIRE 640 Query: 315 GLNTLRLPNTPQ----VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 ++ L++ Q +T+ I V V P + + ++ E ++SAD ALY AK G+NR Sbjct: 641 AVSRLQVKYGAQPVGPITVSIGVAVYPTDGRNTN--ELIESADKALYFAKTNGKNR 694 >UniRef50_Q2RUX2 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RUX2_RHORT Length = 632 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 94/163 (57%), Gaps = 2/163 (1%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ ++ DG+TGV NRR + RH R +++I+D DHFK +NDT+GHD GD Sbjct: 457 LRRLANIDGLTGVLNRRSFTEESELLLSLANRHGRRLSMMIVDADHFKGVNDTYGHDAGD 516 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR--LPN 323 + ALT ++ LR +D++GR GG+EFA+++ T E A RV + L LP Sbjct: 517 RVLKALTGEIAGVLRKTDLLGRIGGEEFAILLPETDQEGAEGLAWRVVLAIRALEVPLPE 576 Query: 324 TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + + +SVGV+ N + + + LK AD ALY AK GR+R Sbjct: 577 GGVLKVTVSVGVSCRNTEAATFDWMLKEADTALYAAKHGGRDR 619 >UniRef50_A9C0A6 Diguanylate cyclase n=12 Tax=Betaproteobacteria RepID=A9C0A6_DELAS Length = 282 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 3/167 (1%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L +S RD +TG+ NRRH+ T+ E D R A +L++DIDHFK IND GH VGD Sbjct: 71 LCSLSLRDPLTGLANRRHFRTIAEREIDRVARSGEAALMLMLDIDHFKQINDQHGHIVGD 130 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP 325 + ++ R L +R D + R+GG+EFA+++ PA ++ R+ + + + +P Sbjct: 131 RVLQSVARTLTNCVRPMDTLARYGGEEFAIVLPACPATFGLSVAERIRSAIERMPVVISP 190 Query: 326 QVTLRISV---GVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 +TL+I++ G L S W + AD LY AK AGRNR + Sbjct: 191 TLTLQITISIGGAYALQWIRSTTTLWTERADKQLYLAKSAGRNRVHI 237 >UniRef50_C6BRI7 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BRI7_DESAD Length = 449 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 112/200 (56%), Gaps = 8/200 (4%) Query: 175 WLSLPIIVIYPLLFGW---VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNE 231 +L+L + + Y + G V + A + E + L M+T+D +TGV NRRH + + Sbjct: 246 FLTLVVCLFYLVASGICMVVLKREAGNIKEQEEHLYFMATKDYLTGVSNRRHVMELGQQM 305 Query: 232 FDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGD 291 +R + ++L++DID+FK+IND +GH+VGD A+ + ++ LR SDV GRFGG+ Sbjct: 306 LAAHQRSACNLSVLVLDIDYFKTINDQFGHEVGDRALSSFSKLCSGVLRSSDVFGRFGGE 365 Query: 292 EFAVIMSGTPAESAITAMLRVHEGLN--TLRLPNTPQVTLRISVGVAPLNPQMSHYREWL 349 EF ++ T + A+ R+ + ++ PQ+T +S+GVA P + + Sbjct: 366 EFLAVLHDTEIDEAVEVAERMRRTVEKGSVNSDGLPQLT--VSIGVAVDFPG-DDFEMII 422 Query: 350 KSADLALYKAKKAGRNRTEV 369 + AD AL+KAK GRN EV Sbjct: 423 RRADEALFKAKSKGRNLVEV 442 >UniRef50_C5V058 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V058_9PROT Length = 636 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 96/173 (55%), Gaps = 1/173 (0%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 A +L RLQ ++ D +TG+ NRR L E+ + RR R +++D+DHFK+I Sbjct: 460 ANELTAANHRLQQLALTDVLTGLPNRRAAMDRLEQEWSSMRRSQRSFACMVLDVDHFKAI 519 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 ND +GH GD A+ + + L+ R D + RFGG+EF VI T ++A R+ Sbjct: 520 NDKYGHPAGDAALSGIAQALRAAARAQDFVCRFGGEEFLVICPDTDVDAAFQCAERLRLQ 579 Query: 316 LNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + T+++ ++ L IS+G+A P+M L AD LY AK+AGRNRT Sbjct: 580 VATMKVAGVAAELRLTISIGIAVSKPEMDKVEALLVGADKCLYAAKQAGRNRT 632 >UniRef50_A4CAZ6 GGDEF domain protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAZ6_9GAMM Length = 293 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 16/212 (7%) Query: 163 ITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTA--TKLAEHKRRLQVMSTRDGMTGVYN 220 IT F P + I I WV + A TKL E +S D +TG++ Sbjct: 91 ITTLFEDTPQVLGFACIFIAIKK----WVKFNGAKTTKLTE-------LSRIDSLTGLFL 139 Query: 221 RRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLR 280 RR++ + +NEFD R + ++L++D+D FK +ND +GH GD+ ++ + ++ +LR Sbjct: 140 RRYFLELAQNEFDLYARKKQPFSILMLDLDFFKRVNDQFGHACGDKVLICFAQLMKESLR 199 Query: 281 GSDVIGRFGGDEFAVIMSGTPAESA--ITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPL 338 +DV+ R+GG+EF V++ T + A I ++ +H N T +T+ +S+GV + Sbjct: 200 KTDVVARWGGEEFIVLLPNTRLKEAVEIAKLINMHTR-NKKMACETNTITITVSIGVIEM 258 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + H + + AD LY+AK GR+R+E A Sbjct: 259 HDEFEHLQTMITQADELLYQAKNNGRDRSEFA 290 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 108/220 (49%), Gaps = 7/220 (3%) Query: 155 LVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDG 214 +V +L GI ++ + ++V L G SY T + E RR + D Sbjct: 280 MVGYDLAGILTEWSKRAGQLAAGFLLLVALATL-GLRSYLTTVRQREELRR---QADTDP 335 Query: 215 MTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQ 274 +TGV NRRH ++ +E R+ L ++DIDHFK+INDTWGH GD I L Sbjct: 336 LTGVPNRRHLMSVAEHELARTLRYGGALALFMVDIDHFKAINDTWGHPTGDRVIQVLAAA 395 Query: 275 LQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN--TLRLPNTPQ-VTLRI 331 + + R D GR GG+EFA ++ T E A R+ E + T L + Q V + Sbjct: 396 MAASAREQDTAGRLGGEEFAAVLPETDLEGAAIMAERLREAVEAITSALDDQGQPVRFTV 455 Query: 332 SVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 S+GVA + + L AD ALY AK GRNR E+AA Sbjct: 456 SIGVAAIQLGDGSVEDILGRADRALYAAKHGGRNRVEMAA 495 >UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVG8_9CYAN Length = 329 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 102/179 (56%), Gaps = 7/179 (3%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T +L + + + D +TG++NRRH ++ E+ +NR +++++DIDHFK Sbjct: 130 TKDELNKKSAAFEKQAITDPLTGIFNRRHLMSISEIEYQKAVNYNRLFSIIMLDIDHFKK 189 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 +NDT+GH VGD+ + +T+++Q LR DV GRFGG+EFA+I+ G + A+ R+ + Sbjct: 190 VNDTYGHIVGDQVLKRMTQEVQNLLREGDVCGRFGGEEFAIILPGADLKIALKIAERLRQ 249 Query: 315 GLNTLRLP-------NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + +P + ++ + IS+GV + + + AD ALY+AK GRN+ Sbjct: 250 AIADFYIPIYDSNSSSNLKIKITISLGVTTYHIDDDKLDKMWRRADDALYQAKAKGRNQ 308 >UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UB95_XANAL Length = 595 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 61/170 (35%), Positives = 97/170 (57%), Gaps = 2/170 (1%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + RL+ S RD +TG+YNRR+ E L E C R + L+++D+DHFK++ND +GH Sbjct: 411 RHRLRTQSIRDPLTGLYNRRYLEESLLRELSRCARRDLPLALMMLDLDHFKALNDRFGHA 470 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 GD + A + L +R D+ R+GG+EF VI+ G A+ A ++ + +++ Sbjct: 471 GGDALLAAFGQLLGGLVRPEDIACRYGGEEFTVILPGAAADVAQRRAEQIRAAVEQMQVQ 530 Query: 323 NTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + Q+ ++ +S+GVA S E L+ AD ALY K++GRNR A Sbjct: 531 HHGQMLPSITVSIGVAAYPEHGSTGEELLRCADAALYCGKRSGRNRVASA 580 >UniRef50_B4U7Y9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7Y9_HYDS0 Length = 846 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 2/169 (1%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 + ++ + L+ +TRD +T +YN+R + +L E + +RHN +LL+ID D+FK IND Sbjct: 419 INKYTKELEYYATRDPLTNLYNQRVFWELLEYEVERAKRHNYKFSLLVIDFDNFKLINDA 478 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN- 317 +GH VGD + + + ++ R D+I R+GGDEF VIM T AE A +A R+ + ++ Sbjct: 479 YGHTVGDNFLRRVAKIIEANFRNEDIIARYGGDEFVVIMPYTDAEQAFSASKRLLDDIDK 538 Query: 318 -TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 ++ + + IS+G A +E AD LYK K+ G+N Sbjct: 539 FSMEVNSGKYAKATISIGAAVYPDHARAAKELFVLADNLLYKMKEEGKN 587 >UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clostridium thermocellum RepID=A3DHG2_CLOTH Length = 415 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 99/170 (58%), Gaps = 13/170 (7%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 +L+ +T D +T +YNRR E L N+ + N+ +++++DID+FK INDT+GH+ G Sbjct: 241 QLRKNATTDKLTKLYNRRFLEQYLDNQLEITGFSNQKLSVIMMDIDNFKRINDTYGHNAG 300 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG--------L 316 D +V R + LR +D++ R+GG+EF I+ + ++A R+ E + Sbjct: 301 DAVLVTFARVILRCLRQTDLVARYGGEEFIAILPSSDTKNAYDIAERIRESIAAEPMPKI 360 Query: 317 NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 N ++LPN + S GV+ + + +K+AD+ALYKAK+AG+NR Sbjct: 361 NDVQLPN-----ISCSFGVSTYPTHAKNKNDLIKAADIALYKAKQAGKNR 405 >UniRef50_C7HZA2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia K12 RepID=C7HZA2_THIIN Length = 530 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 70/179 (39%), Positives = 102/179 (56%), Gaps = 8/179 (4%) Query: 198 KLAEHKRRLQV---MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 ++ + K+R Q M+ D +TG YNRR + + R ++ +LL+ID DHFK Sbjct: 351 EITDRKQREQALTRMTQTDALTGFYNRRGFFERANALLQSAR--DQAPSLLLIDADHFKR 408 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA--ITAMLRV 312 +NDT GH VGD +V L ++ LR DVIGR GG+EFAV + T E+A + +R+ Sbjct: 409 VNDTHGHAVGDTVLVQLANRMNAALREGDVIGRIGGEEFAVFLPTTSLENAYELADRIRL 468 Query: 313 HEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + LR+ +V + +S+GV L P S L AD A+Y+AK+ GRNR E+AA Sbjct: 469 SVSRHALRIQGL-RVPMTLSIGVTVLQPGESTLEAALGRADTAMYQAKQNGRNRVELAA 526 >UniRef50_Q7NT69 Probable Two component sensor n=1 Tax=Chromobacterium violaceum RepID=Q7NT69_CHRVO Length = 558 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 14/225 (6%) Query: 153 SCLVTLELTGITVSFNSAPLEWWLSL----PIIVIYPLLFGWVSYQTATKLAEHKRRLQV 208 S L L V +SA L ++ SL ++ I LL G + Y + + +L Sbjct: 319 SLLAGYALASAVVLLSSAALLYFASLWAGGSVVAILLLLSGTMRYVSG------QAQLFS 372 Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 ++ DG+T +YNRRH++ + + CR+ + LLI+DIDHFK ND +GH GDEA+ Sbjct: 373 LAFTDGLTRLYNRRHFDEAFGHAVEQCRQKRKPLALLILDIDHFKKYNDHYGHYAGDEAL 432 Query: 269 VALTRQLQITLR-GSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN--TP 325 + R L+ R + R GG+EF V+++ A++A R L + LP+ +P Sbjct: 433 QKVARALKDCFRQKGQLTARLGGEEFGVLLTPGDTPQALSAAERFLGRLAAMELPHSASP 492 Query: 326 QVTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRTEV 369 + S+GV P R + AD ALY+AK+ GRNR + Sbjct: 493 LGKISCSIGVCACIPGPADSTRTLFEQADQALYEAKRGGRNRASL 537 >UniRef50_A9BUD4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BUD4_DELAS Length = 316 Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 5/178 (2%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 +T ++A+ ++ LQ++S DG+TGV NRR + L EF +R +L+++D+DHFK Sbjct: 134 RTHLEIAQQRQMLQLLSHSDGLTGVANRRFFSAQLEREFMRLQRLGEPLSLVMMDVDHFK 193 Query: 254 SINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 + ND +GH VGDE + +++ +Q L R D++ R+GG+EF ++ T + A+ + Sbjct: 194 AYNDHYGHLVGDECLSQISQAIQGALHRPGDLLARYGGEEFVCLLPHTALDGAVLVAQGI 253 Query: 313 HEGLNTLRLPNTPQ---VTLRISVGVAPLNPQMSHY-REWLKSADLALYKAKKAGRNR 366 + L L LP+ L +S+GVA + P ++ ++ L AD LY AK AGR+R Sbjct: 254 VDALRLLDLPHAASPLGQALTVSLGVACIAPSSTNSAQQLLADADRRLYLAKNAGRDR 311 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 109/194 (56%), Gaps = 12/194 (6%) Query: 177 SLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCR 236 S+ I+ ++ +LF + A + + + M+T D +TG++NR ++ + E Sbjct: 304 SILILFLFTILFYF---------AISRIKFEEMATVDKLTGLFNRHKFQEIAEIEIKRSH 354 Query: 237 RHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVI 296 RH R ++++ DIDHFK INDT+GHD+GD + L + ++ +R D R+GG+EF ++ Sbjct: 355 RHKRPLSVILFDIDHFKKINDTYGHDIGDVVLRELAKIIKQNIRKYDYAIRWGGEEFLIL 414 Query: 297 MSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLAL 356 T + A ++ + + + P +VT IS+GVA ++P S + +K AD AL Sbjct: 415 TPETDEKQAFAMAEKLRKAVESHTFPEVGKVT--ISLGVASVDPNES-IDQAIKKADNAL 471 Query: 357 YKAKKAGRNRTEVA 370 Y +K GRN+T VA Sbjct: 472 YGSKLGGRNKTTVA 485 >UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWB7_DESAC Length = 513 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 69/183 (37%), Positives = 107/183 (58%), Gaps = 13/183 (7%) Query: 194 QTATKLAEH----KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 QTA + + + LQ+ S D +T V NRR ++ L++E+ RR+ +LL+IDI Sbjct: 329 QTANHMLDRIESLNKELQLASMTDSLTRVGNRRQFDEHLQHEWLIARRNGTVVSLLMIDI 388 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITA 308 DHFK NDT+GH GD+ + ++ + + R +D++ R+GG+EFAVI+ P A Sbjct: 389 DHFKLYNDTYGHQDGDQCLQSVAEVISNQVKREADLVARYGGEEFAVILPDVPLIGAQKV 448 Query: 309 MLRVHEGLNTLRLPN-----TPQVTLRISVGVAPLNPQMSH-YREWLKSADLALYKAKKA 362 R+ + +N L +PN TP +T +S+G ++PQ E ++ AD ALY+AKKA Sbjct: 449 AERIRQAINDLGIPNVDALKTPWIT--VSIGYESMSPQSGQDCEELIRFADQALYRAKKA 506 Query: 363 GRN 365 GRN Sbjct: 507 GRN 509 >UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXY8_CHRSD Length = 608 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 63/171 (36%), Positives = 98/171 (57%), Gaps = 2/171 (1%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + +L+ S RD +TG+YNRR + L E R +L++DIDHFK IND +GH Sbjct: 437 REQLEEASIRDALTGLYNRRFLDETLARELARAERQAVPLCVLMLDIDHFKPINDDYGHA 496 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 +GD A+VA+ L +R D++ R+GG+EF +IM G ++A + ++ L + Sbjct: 497 LGDRALVAVAELLNAHVRRDDIVCRYGGEEFVIIMPGAGLDAAQRRGDHLRRCVSALDVE 556 Query: 323 -NTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 N P + L +S+G+A + L SAD+ALY+AK+ GRNR +A+ Sbjct: 557 ANVPAPIRLTVSLGLACYPQHGDNAEHLLHSADMALYEAKQGGRNRLTIAS 607 >UniRef50_A6Q428 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q428_NITSB Length = 609 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 5/182 (2%) Query: 186 LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 L VS QT + E LQ S D MTG YNRR+ + ++ R N T++ Sbjct: 417 LTISKVSLQTKLLMQE----LQNQSLIDRMTGAYNRRYLDIFMKKNVPQALRANVPYTIM 472 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA 305 ++DIDHFK +NDT+GHD GD+ I L ++ +R SDV+ RFGG+EF V++ E + Sbjct: 473 MLDIDHFKMVNDTYGHDAGDKVIKILVDTIKENIRKSDVVVRFGGEEFLVLLYNCHKEDS 532 Query: 306 ITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 + + + + R+ ++ +S+G+ + +K AD+ALY+AK+ GR Sbjct: 533 LQIAENIRKSFSKKRIDVGDEKIHKTVSIGLCEFPKDTKQFWHAIKLADMALYQAKENGR 592 Query: 365 NR 366 N+ Sbjct: 593 NK 594 >UniRef50_A6EXN6 Putative uncharacterized protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EXN6_9ALTE Length = 397 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 1/169 (0%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + ++RL++M+ RDG+TG+YNRR FDN + +L++D+DHFK IND WG Sbjct: 218 QSEQRLRIMAERDGLTGLYNRRSLFREGIRAFDNALQTQSPMAVLMMDLDHFKQINDRWG 277 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL-NTL 319 H GDEA+ + R L+ LR D+IGR GG+EF V++ + + R+ + + N Sbjct: 278 HAAGDEALRFVARTLRKELRNDDIIGRIGGEEFTVVLRISAEDDVRIITRRLLDAIANNG 337 Query: 320 RLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 R + L S+G + + + + + AD ALY AK GRNR E Sbjct: 338 REIQGLPLYLSASIGGVERANRHTTFADMMIEADAALYNAKNKGRNRAE 386 >UniRef50_A6FCV1 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FCV1_9GAMM Length = 568 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 107/190 (56%), Gaps = 16/190 (8%) Query: 192 SYQTATKLAEH----------KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 + Q A +AEH + +L+ + D +TG+YNRR++E + E +RH ++ Sbjct: 342 TQQLAFTVAEHLGLALANLNIQEKLREQAISDPLTGLYNRRYYEETINQELMRAKRHKQE 401 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 +LL++D+DHFK ND +GHD GD + + L ++RG D I R GG+EF +++ GT Sbjct: 402 LSLLMLDLDHFKRFNDNYGHDAGDYVLKTIGSLLLESMRGEDTICRLGGEEFIIVLPGTG 461 Query: 302 AESAITAMLRVHEGLNTLRL--PNTPQVTLRISVGVA--PLNPQMSHYREWLKSADLALY 357 E+A + + +N L L + L +S+G++ P+N E K +D+ALY Sbjct: 462 IEAARQIANGLCKSINELHLAMKDLSLGKLSVSIGISTYPINGMQKD--ELTKLSDIALY 519 Query: 358 KAKKAGRNRT 367 +AK+ GRN++ Sbjct: 520 EAKERGRNQS 529 >UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BI17_9GAMM Length = 606 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 63/175 (36%), Positives = 103/175 (58%), Gaps = 3/175 (1%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L +R++++S D +TG+YNR+ + + F+ + + +L+++DIDHFK IND Sbjct: 425 ELEAKHQRVKLLSQTDHLTGLYNRQSLDNRTKALFEQAEQSDSHLSLIMMDIDHFKPIND 484 Query: 258 TWGHDVGDEAIVALTRQLQ-ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 +GH VGDE +V + L+ + LR D+I RFGG+EF +++ T E A + V L Sbjct: 485 RFGHQVGDECLVHVASFLRGLNLRHKDLIARFGGEEFTIVLPDTSIEHAQHLIEDVCTRL 544 Query: 317 NTLRLPNTP-QVTLRISVGVAP-LNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + + ++ L S G+A + Q Y E ++ AD ALY+AK+ GRNR EV Sbjct: 545 SKETVSGSHYEIQLTASFGIAERVISQAPSYEELIQKADQALYQAKQNGRNRVEV 599 >UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5UZW7_ROSS1 Length = 797 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 93/163 (57%), Gaps = 3/163 (1%) Query: 207 QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDE 266 Q ++T D +TG++NR H+ + E + RR+ D LLIID+DHFK+INDT+GH GD Sbjct: 626 QRLATTDQLTGLFNRYHFFALAPRELERARRYRHDVALLIIDVDHFKTINDTYGHVAGDT 685 Query: 267 AIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTP 325 + + ++ LR +D++ RFGG+EF ++ T A+ R+ + +P N Sbjct: 686 VLQHIADHMRRELRDADILARFGGEEFIALLPETNLTGALRVAGRLRATIEANPVPLNGQ 745 Query: 326 QVTLRISVGVAPLNP--QMSHYREWLKSADLALYKAKKAGRNR 366 + ISVG A L+P + H ++ AD ALY AK GRN+ Sbjct: 746 SIRATISVGCASLHPATRDEHLDTLIQRADRALYTAKAGGRNQ 788 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 98/174 (56%), Gaps = 3/174 (1%) Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 +E +R+L+ + D +TG+YNRR ++ ++ + +L+++D+DHFK NDT Sbjct: 146 SERQRKLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFKRYNDTH 205 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH GDEA++AL + + LR D+ R+GG+EFAV++ T A S R+ + L Sbjct: 206 GHQGGDEALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLRTAVEAL 265 Query: 320 RLPNTPQVTLR---ISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + +L IS+GVA + + E + +AD ALY+AK GRNR V Sbjct: 266 EIKDDEGNSLSGITISLGVAQTSGTVDSVSELIATADAALYQAKNQGRNRVVVG 319 >UniRef50_Q7MAB9 GGDEF DOMAIN PROTEIN n=1 Tax=Wolinella succinogenes RepID=Q7MAB9_WOLSU Length = 436 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 7/179 (3%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 VS+ T + ++LQ +T D +TG+ NR + +L + + + ++ DID Sbjct: 262 VSFTDITSFEKENKKLQRQATTDTLTGIDNRFRLQEIL----EEWKARDESYGVIFFDID 317 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFK IND +GHD GDE +V L R ++ LR D+ R GG+EF V++ G A Sbjct: 318 HFKQINDEYGHDKGDEILVGLARLIKTELRDEDIFARLGGEEFVVLLKGASLPKATEIAQ 377 Query: 311 RVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 R+ + + P +V+ S GVA N E +K ADLA+Y AK+AGRNR EV Sbjct: 378 RLRQAIEQHPFPMQRRVS--CSFGVAK-NQFREEPEETIKRADLAMYLAKRAGRNRVEV 433 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 92/176 (52%), Gaps = 3/176 (1%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 V + T+ + L+ S RD +T +YNRR +L E RRH TL+++DID Sbjct: 314 VEFADITERTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDID 373 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFK INDT+GHD GD + + + LR +D++ R+GG+EF + T + A Sbjct: 374 HFKRINDTFGHDSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAE 433 Query: 311 RVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 ++ + P VT ISVG++ L + +K AD ALY AK+ GRNR Sbjct: 434 KIRSSIAMFSFPTVGAVT--ISVGISLLESK-DDINALIKRADTALYAAKEMGRNR 486 >UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI000185121C Length = 466 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 102/181 (56%), Gaps = 3/181 (1%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 + + T++ + +L+ + D +TG+YNRR + F + + T++++DID Sbjct: 278 IIFTDMTEVKNLQSQLEHFAYYDELTGIYNRRAFFQYCEEAFQESKEQDTPFTIILMDID 337 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAE--SAITA 308 +FK +NDT+GH VGD+ + + + Q L G ++ R+GG+EF + + G E +A+ Sbjct: 338 YFKKVNDTYGHSVGDQVLEQVAKVCQSQLHGHELFARYGGEEFVLGVKGYTEEEGAALAE 397 Query: 309 MLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 LR T+ P+ ++T+ +S+GVA L + + L AD ALY+AK+AGRNR Sbjct: 398 QLRSEVEALTIHTPD-GKITVTLSLGVAALTKEDEALYQILNHADQALYRAKEAGRNRVC 456 Query: 369 V 369 V Sbjct: 457 V 457 >UniRef50_A6Q9K1 Signal transduction response regulator n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q9K1_SULNB Length = 409 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 107/172 (62%), Gaps = 3/172 (1%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L + +L+ +++ D +T ++NRRH+E++ + +R++ + +++IDID+FK IND Sbjct: 233 ELNKTNEKLKKLASTDPLTELFNRRHFESLTEPFLELAKRNDTEIAIIVIDIDNFKKIND 292 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 T+GH VGD+ IV L L+ R SD++ R+GG+EF ++++ T +S +T ++ + + Sbjct: 293 TYGHKVGDDVIVDLATILKRGSRQSDIVCRWGGEEFIILLANTNGKSVLTIAEKIRKKVE 352 Query: 318 TL--RLPNTPQVTLRISVGVAPLNPQM-SHYREWLKSADLALYKAKKAGRNR 366 L L + ++ IS GVA +N + + + AD ALYKAK +G+N+ Sbjct: 353 NLVRTLEDGNELKFTISCGVALVNKESNTSIHNVIDRADRALYKAKNSGKNK 404 >UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VQQ9_PSEU5 Length = 466 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 1/192 (0%) Query: 176 LSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNC 235 L+L ++ + L +Q+ +L +L ++ D +TGV +RR + L E Sbjct: 272 LALSVVALLIFLLSSRYFQSIARLRLAHGQLAQLANTDVLTGVSSRRAFLAGLEAELARA 331 Query: 236 RRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAV 295 RRHN +LL++DIDHFK +ND GH +GD + + LR D++GR GG+EFA+ Sbjct: 332 RRHNESLSLLMLDIDHFKRVNDVHGHPIGDAVLKQFSETCAGMLRAHDLLGRLGGEEFAI 391 Query: 296 IMSGTPAESAITAMLRVHEGLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADL 354 ++ T AE A ++ + +P +T+ +S+G+A + + + AD Sbjct: 392 VLPHTDAEGARCVAEKIRTAVAQTPMPTAAGDITVTVSIGLAQMEGLPGEVDQLMARADQ 451 Query: 355 ALYKAKKAGRNR 366 ALY+AK+ GRN+ Sbjct: 452 ALYEAKRGGRNQ 463 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 4/184 (2%) Query: 191 VSYQTATKLAEHKRR--LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ Q A +A R LQ S RD +TG+YNRR+ E +L E +R ++++ID Sbjct: 1429 VAEQVALAIANLNLRETLQYQSIRDPLTGLYNRRYLEEVLTQEIARGQRRQHPISVVMID 1488 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 +D+FK NDT+GHDVGD + + L+ T+RGSD+ R+GG+E +I+ + E Sbjct: 1489 VDYFKRFNDTYGHDVGDYVLQTIGAMLKETVRGSDIACRYGGEEMTLILPESSLEETTIK 1548 Query: 309 MLRVHEGLNTLRLPNTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + E + L L Q L IS+G+A + +++AD ALY+AK AGRN+ Sbjct: 1549 AEEIREAIAQLTLAYNGQHLGKLTISLGIAGFPKHGTTGIALIQAADAALYRAKAAGRNQ 1608 Query: 367 TEVA 370 VA Sbjct: 1609 VVVA 1612 >UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZT6_DESAD Length = 442 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 3/169 (1%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 ++A L+ MS D +TG+YNRR + ++ +EFD +R+N T ++IDID+FK+IND Sbjct: 273 QVASRTEELRQMSQTDMLTGLYNRRKMDEIMHHEFDRFKRYNTPITFILIDIDNFKTIND 332 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 T+GH VGD +V L R +D IGR+GG+EF V+ T + + ++ + + Sbjct: 333 TYGHAVGDNVLVRFAEILISNTRKTDRIGRWGGEEFIVVCPETTSGEGMIIAEKLRQRIA 392 Query: 318 TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R P T S G+ +N Q + D ALY +K+ GRN+ Sbjct: 393 ETRFPTINNCT--ASFGITEIN-QQDDFMSLFARCDTALYSSKEQGRNK 438 >UniRef50_Q1K456 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K456_DESAC Length = 403 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 102/165 (61%), Gaps = 2/165 (1%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 ++L+ +++ D +TG+ +RR + ++ F R+ R + LIIDIDHFK +NDT+GH Sbjct: 228 QKLKELASTDVVTGLQSRRAFMEEAKSLFQIAERYQRPFSFLIIDIDHFKKVNDTYGHLG 287 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT--LRL 321 GD +V L + + LR +D++GR GG+EFAVI+ T + + R+ E + T +R+ Sbjct: 288 GDVVLVELGKIMSSCLRATDILGRIGGEEFAVILPETGPDHTAELIERLLEKVRTTEIRI 347 Query: 322 PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + V++ +S+GVA + P H + + +AD ALY+AK GRNR Sbjct: 348 DDDTLVSVTVSIGVATVPPLPIHVGKVMAAADKALYQAKSDGRNR 392 >UniRef50_A3UFL0 GAF sensor diguanylate cyclase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFL0_9RHOB Length = 341 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 90/166 (54%), Gaps = 2/166 (1%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L++ + D +TGV RRHW +M++ E R++ + + DID FK IND +GH VGD Sbjct: 164 LRIQAGSDQLTGVMARRHWVSMVKEEIQRAARNSNLLCIALFDIDRFKRINDAYGHAVGD 223 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN--TLRLPN 323 + I + + LR +GR GG+EFA++ + + A+ A R + TL P+ Sbjct: 224 QVIRNVIATCKHELRAGSKLGRIGGEEFAILFTECALDQAVVAAERCRRAIERLTLTAPD 283 Query: 324 TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + S GVAPL E ++ AD ALY+AK GRNR EV Sbjct: 284 GEDIEITASFGVAPLFSYALSPDELIELADRALYQAKSGGRNRVEV 329 >UniRef50_A5W338 Diguanylate cyclase n=3 Tax=Pseudomonas putida RepID=A5W338_PSEP1 Length = 381 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 23/250 (9%) Query: 142 LFVAGLVLMVVSCLVTL-ELTGITVSFNSAPLEWWLSLPI------IVIYPLLFGWV--- 191 LF G+ + VSC + +T +++ P WL L I + L+F W Sbjct: 123 LFAVGMSVSAVSCYSSYRNMTLVSMGLVLLPSTGWLLLQPSTLQQGIALAVLVFAWFVVS 182 Query: 192 -------SYQTATKLAEHKRRLQ----VMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR 240 + TA +L +R V S D +TG+ NRR + + CR + Sbjct: 183 ATQSLSSALTTAWRLKHEMQRAHRLAMVASCTDELTGLNNRRAFFDNASAQHAQCRDAGK 242 Query: 241 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT 300 +L++D+DHFK INDT+GH GD+ + + + +LR +D+ GR GG+EFA+++ T Sbjct: 243 FMAVLMLDVDHFKQINDTFGHAAGDQVLQRIGAAISASLRDNDIAGRLGGEEFAILLPNT 302 Query: 301 PAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 P ++AI R+ + LR+ + VT S+G+A + L SAD A+Y +K Sbjct: 303 PPDTAIEVAERLRALIAKLRVNDEHPVT--ASIGLAFAKAPATELGALLSSADSAMYLSK 360 Query: 361 KAGRNRTEVA 370 +GRNR VA Sbjct: 361 VSGRNRVTVA 370 >UniRef50_D1CCW0 Diguanylate cyclase with GAF sensor n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCW0_THET1 Length = 563 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 102/174 (58%), Gaps = 2/174 (1%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 A + AE R+L ++RD ++G N R + + E + RR ++L D+DHFK + Sbjct: 372 ALRNAEWYRQLSEKASRDPLSGFLNHRAFVERVAEEIERSRRLYTGLSILFFDLDHFKQV 431 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH+VG++ + ++R + TLR DV+GRFGG+EF I+ G + + A R+ Sbjct: 432 NDTFGHEVGNKVLKEMSRVARQTLRSIDVLGRFGGEEFEAILPGASIDDSKAAAERLRSA 491 Query: 316 LN--TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 ++ + L + +TL++SVG A + E +++AD ALY+AK+ GRN+ Sbjct: 492 ISGHQVVLEDGRTITLQVSVGAATYPFDGATPEELIRNADAALYEAKRRGRNKV 545 >UniRef50_D1B2B4 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B2B4_SULD5 Length = 381 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 91/165 (55%), Gaps = 2/165 (1%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + LQ ++ D +T ++NRRH+ T+ + E R+ ++DID FK INDT GH Sbjct: 214 EEELQHLAQTDILTSLFNRRHFLTLAQQEIIKALRYEHSLCFAVLDIDFFKRINDTLGHP 273 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 VGD + L R L+ ++R SD++ R GG+EFA ++ E A M R+ + ++ + Sbjct: 274 VGDIVVSTLARHLKHSIRQSDIVARIGGEEFAFLLLHVNEEQARAKMERLRQEISECIIE 333 Query: 323 NTPQVTLR--ISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 TL +S+G+A L P + E AD LY+AKKAGRN Sbjct: 334 YGVDKTLSVTVSIGLAMLQPPIQTLDELYMKADQKLYEAKKAGRN 378 >UniRef50_A4BB60 Putative sensor protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BB60_9GAMM Length = 411 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/160 (40%), Positives = 89/160 (55%), Gaps = 4/160 (2%) Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 D +TGV NRR T L E RRHN TLL +D+DHFK +ND +GH VGD+ + Sbjct: 252 DSLTGVLNRRALTTRLDEEVQRSRRHNHPLTLLFLDLDHFKQVNDHYGHAVGDQILQETC 311 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP--QVTLR 330 + L +R SDV+ R+GG+EFA+I++ T E+ R+ E +T R + L Sbjct: 312 QALTECIRESDVLARYGGEEFAIILTDTTLEAGHELAERLQECFST-RFSRHAILEKPLT 370 Query: 331 ISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 +SVG+ L P + AD ALY AK +GRNR +A Sbjct: 371 MSVGLTSLFP-TDTLTQLFTRADTALYDAKNSGRNRIVIA 409 >UniRef50_Q21ED1 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21ED1_SACD2 Length = 476 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/194 (34%), Positives = 107/194 (55%), Gaps = 8/194 (4%) Query: 176 LSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNC 235 L L ++ L+F W + +L+ R + + D +T +YNRR +E Sbjct: 270 LFLAFNMVISLVF-WCTQSRNRELSVKWSRAETQARLDPLTKIYNRRGFE----ERAIQL 324 Query: 236 RRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAV 295 R R +LLI+DIDHFK +ND +GHD+GDE + ++++ +R SDV R GG+EFAV Sbjct: 325 MRQKRTLSLLILDIDHFKYVNDHYGHDIGDEVLRQFSKKIAGMIRDSDVFARIGGEEFAV 384 Query: 296 IMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLR--ISVGVAPLNPQMSHYREWLKSAD 353 I++ E A R+ + + LP + T++ +S+GV+ ++ + +R WLK+ D Sbjct: 385 ILADQNLELAGLMAERIRATIESTELPVSSDNTIKYTVSIGVSSVSEGVDIHR-WLKTTD 443 Query: 354 LALYKAKKAGRNRT 367 LY+AK GRN+ Sbjct: 444 KLLYQAKAQGRNQV 457 >UniRef50_D1RSU9 Diguanylate cyclase n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RSU9_SEROD Length = 520 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 106/180 (58%), Gaps = 9/180 (5%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 +T +L RL+ ++ DG+TG+ NRR ++ L+NE R+ R LL++DID+FK Sbjct: 335 RTRDQLTSINLRLEELALLDGLTGLANRRQFDIALKNELARAARNYRSVALLMLDIDYFK 394 Query: 254 SINDTWGHDVGDEAIVALTRQLQ-ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 ND +GH GD+ + + + L+ + R +D++ R+GG+E ++I+ T A+ A+ RV Sbjct: 395 QYNDIYGHVAGDQCLQQIGQMLKGLASRSNDIMARYGGEEMSIILPDTDAQGALIFADRV 454 Query: 313 HEGLNTLRLPN--TPQVTLRISVGVAPLNPQMSHYRE----WLKSADLALYKAKKAGRNR 366 + + L++P+ P + +S+G+ P M Y + ++ AD ALY+AKK G+NR Sbjct: 455 MQAVRELKIPHQGNPHGVITLSIGICAKVPHM--YNDTPIGFINMADSALYQAKKEGKNR 512 >UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KB78_CYAP7 Length = 547 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 108/175 (61%), Gaps = 6/175 (3%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 KL + +RL+ + D +TG+YNRR+++ L E+ R +L+++DID+FK+ ND Sbjct: 350 KLTQENKRLRKLVYLDELTGIYNRRYFDHYLEREWRRMTREKAPLSLMLLDIDYFKNYND 409 Query: 258 TWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 T+GH +GD + + + +Q +L R +D++ R+GG+EFA+I+S + A+ + E + Sbjct: 410 TYGHQLGDACLKKVAQAIQKSLKRSTDIVARYGGEEFAIIISQCDNKGALFLAEIIREQI 469 Query: 317 NTLRLPN-TPQVTLRI---SVGVAPLNPQM-SHYREWLKSADLALYKAKKAGRNR 366 +L + + QV L+I S+GVA + P + + + ++ AD ALY++K GRNR Sbjct: 470 KSLAINHKNSQVNLKIVTASIGVATIIPALETQPKMLIQMADEALYQSKHEGRNR 524 >UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9S7_SPHTD Length = 1765 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/180 (37%), Positives = 97/180 (53%), Gaps = 5/180 (2%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 V+ + A AE +Q ++ D +TG YNRRH T E +R NR +I+DID Sbjct: 1589 VAIENARLFAE----VQRLAVTDDLTGTYNRRHLLTTAERELSRAQRFNRPLAAIILDID 1644 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 FK +ND GH VGDE + A+ +L+ LR DV+GR+GG+EF +I+ T SA Sbjct: 1645 EFKRVNDAHGHAVGDEVLRAVADRLRSGLREVDVLGRYGGEEFVIILPETDLISAYQIAE 1704 Query: 311 RVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 R+ + + +T V++ IS+GVA +P + L D LY AK+ GRNR V Sbjct: 1705 RLRNSIAAEPIATSTGPVSVTISLGVAAADPTTPDFASLLSRIDDLLYTAKRRGRNRVVV 1764 >UniRef50_D0I7V3 GGDEF family protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I7V3_VIBHO Length = 557 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 89/164 (54%), Gaps = 2/164 (1%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 R L M RD +TG+ N + + L E RH + + ++IDIDHFKSIND +GH V Sbjct: 375 RALSAMMDRDSLTGLLNHSNLKMALERELSRACRHKKPISFVMIDIDHFKSINDQYGHPV 434 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 GD+ I + R L R +D R+GG+EFA+I+ TPA+ A+ + + N Sbjct: 435 GDKVIKGVARLLNYRFRKTDTSARYGGEEFALILPDTPADIALRLIDEFRNTFSKTPFSN 494 Query: 324 TPQVTL-RISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 P+ +S G+A P+ +++AD +LY AKK GRNR Sbjct: 495 GPETFYATLSAGIATF-PEFDTVEALIEAADSSLYLAKKQGRNR 537 >UniRef50_A0L0Z2 Diguanylate cyclase n=13 Tax=Proteobacteria RepID=A0L0Z2_SHESA Length = 302 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 96/180 (53%), Gaps = 6/180 (3%) Query: 190 WVSYQTATKLAEHKRRLQV--MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 WV+ + + HK LQ+ +S D +TG+YNRR + L+ FD RH A++L++ Sbjct: 120 WVASNISKR---HKLELQLRQLSDTDQLTGLYNRRRLDRDLQLLFDTFSRHRIPASILVL 176 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 D+DH K IND GH GD I+A+ Q R +D RFGGDEF + + G + AI Sbjct: 177 DLDHLKRINDQLGHQAGDRVIMAVADTCQQQFRKTDSAYRFGGDEFVIALPGVDHDQAIV 236 Query: 308 -AMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 A L+ + + +S+GVA + Y + LK AD ALY+AK+ G+NR Sbjct: 237 FAEYLCDCCFKALQQLSVKGLFATVSIGVASIEAGDKSYEDTLKRADAALYQAKRDGKNR 296 >UniRef50_C4XTI2 Response regulator receiver protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XTI2_DESMR Length = 420 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/175 (36%), Positives = 101/175 (57%), Gaps = 2/175 (1%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 +T+L + +L ++S+ D +TGVYNRR + L E R + LL IDID+FK+I Sbjct: 240 STELKMSEEKLDILSSTDQLTGVYNRRKFMESLHGELQRSARFDVSNALLSIDIDNFKAI 299 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH VGD+A++ + L+ +LR DV+GR GG+EF V+ G E + R+ Sbjct: 300 NDTYGHPVGDQALIYVAHILKNSLRQVDVLGRVGGEEFGVVAPGVGKEDVAPFLNRLIVE 359 Query: 316 LNTLRLPNTPQVTLRISVGVAP-LNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 N L +T + ++I+V + + + ++ E L AD ALY +K G+NR + Sbjct: 360 FNE-NLFDTQKEKIKITVSIGCVVFGRNNNIEEVLSKADSALYDSKHKGKNRFSI 413 >UniRef50_C1SGT6 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGT6_9BACT Length = 224 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 15/216 (6%) Query: 163 ITVSFNSAPLEWWLSLPI--------IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDG 214 IT+ FN+ L++ + I+ L F +T + E L+ M+ +DG Sbjct: 9 ITIRFNALLKHKELTIELEKKNEEMESTIFELAFA------STNVLEQNEFLEQMAKKDG 62 Query: 215 MTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQ 274 +T ++N +++ L++E R+N T+ I+D+D FK +ND +GH GDE + A Sbjct: 63 LTMLFNHSYFKDKLKDEMVRSERYNNCFTIAILDLDFFKRVNDQYGHVKGDEVLKAFANI 122 Query: 275 LQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL-NTLRLPNTPQVTLRISV 333 ++ T+R +D+ R+GG+EFA+I + T A+ + R+ E L NT+ T + S Sbjct: 123 IKETVRNTDIAARYGGEEFAIIFTETDITDAVVVLDRIREKLNNTIFSSETVCFKVTFSA 182 Query: 334 GVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 GV + + AD ALY +K GRNRT + Sbjct: 183 GVTEYSKSYRDVEYMVNIADKALYISKSEGRNRTTI 218 >UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5G2_ACIC5 Length = 369 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 3/173 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 ++ T+L E LQ M T D +TGV NRR ++ L+ + R +LL++D+DHFK Sbjct: 182 ESQTRLKEANACLQEMVTTDALTGVKNRRAFDEGLQQAWKMSARTKSPLSLLMVDVDHFK 241 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +NDT GH+ GD+ + + + LQ R +D++ R+GG+EF V++ GT AE A+ ++ Sbjct: 242 RVNDTLGHEAGDDVLRLVAQTLQFMTRSTDMVARYGGEEFVVVLPGTEAEPAVAFAEQLR 301 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + L P L +S+GV + E + AD ALY+AK +GRNR Sbjct: 302 LNIANLSWRGHP---LTVSIGVDSGSGSGKTECELVAHADAALYRAKNSGRNR 351 >UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ36_DESVM Length = 698 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/171 (36%), Positives = 96/171 (56%), Gaps = 1/171 (0%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 T E RL+ ++T D +TGV NRRH+ L +E +R+ R ++L++D DHFKSIN Sbjct: 498 TDQVEDTLRLEQLATTDELTGVANRRHFMARLEDEAARAQRYGRPLSVLLLDADHFKSIN 557 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 DTWGH+ GD + +T + ++LR +D+IGR GG+EF V++ T E A+ R+ + Sbjct: 558 DTWGHEAGDMVLRHITDVMGLSLRENDLIGRLGGEEFGVLLPETAQERALRTAERIRAAV 617 Query: 317 NTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + V +SVG A + ++ AD L +AK+ GRNR Sbjct: 618 EDAPVAVRDVWVGCTVSVGAAEYRGANDSLDDLIRRADHMLMRAKEEGRNR 668 >UniRef50_C6CBV2 Diguanylate cyclase n=9 Tax=Enterobacteriaceae RepID=C6CBV2_DICDC Length = 241 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 94/164 (57%), Gaps = 6/164 (3%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 L+ +T D +T V+NR + + + D H + A L+++DIDHFK INDT+GH G Sbjct: 76 ELEYKATHDPLTDVFNR----SAIIDLIDLALEHEQ-AALIVLDIDHFKKINDTYGHPTG 130 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 D I AL +++ L+G IGR GG+EF +++ G A+ +H LN L Sbjct: 131 DAVICALIGRIRDVLQGKGSIGRVGGEEFTILLDGYSLMQAVELAEHIHASLNHTPLDAL 190 Query: 325 PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 P+ + S G++ PQ +H+ E +AD+ALY+AK AGRNR E Sbjct: 191 PEYLVTASFGISWAPPQ-AHFDELYSAADIALYQAKNAGRNRVE 233 >UniRef50_A6FHQ7 PAS sensor diguanylate cyclase and phophodiesterase (Fragment) n=2 Tax=cellular organisms RepID=A6FHQ7_9GAMM Length = 950 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 99/181 (54%), Gaps = 1/181 (0%) Query: 192 SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 S+ TK +H+ +L+ ++ D +TG+ NR H+E ++ + R D LL +D+D Sbjct: 501 SFVNTTKRKQHEIKLESIAKYDQLTGLVNRSHFEKLVGASLEANRSVLEDNILLYLDLDQ 560 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 FK +ND GHDVGD + +T L+ L S ++ R GGDEF ++++ T ++A+ Sbjct: 561 FKLVNDICGHDVGDSLLKKITVVLKSFLDESAILARLGGDEFGILLNHTNFDNALEVADT 620 Query: 312 VHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + G+ R N L +S+GV L+ + ++ + L AD A + AK+ GRNR V Sbjct: 621 IRCGIEDFRFTHNGRHFVLGVSIGVVTLDESIENFSQALSLADTACFTAKEQGRNRVHVY 680 Query: 371 A 371 + Sbjct: 681 S 681 >UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8F5_ACIDE Length = 1152 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 7/184 (3%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 W++ + T+ H++ L+ ++T D +TG+ NRR + L E R L+++D+ Sbjct: 962 WIA-KDVTERRRHEQTLERLATTDALTGLANRRAFMARLEEERMRPSMGGRGGMLIMLDL 1020 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQIT-LRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 DHFK +NDTWGH GDE +V L R L+ LR +D+ GR GG+EFAV++ T AE A+ Sbjct: 1021 DHFKRVNDTWGHAAGDEVLVHLARLLRGDLLRATDLAGRLGGEEFAVLLPDTTAEEALGV 1080 Query: 309 MLRVHEGLNTLRLPNTPQVTLRI--SVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R+ L ++ TL++ S+GVAP+ L AD+ALY+AK GRN+ Sbjct: 1081 AERLRRALEQSKIHVGDGATLQVTMSLGVAPITGDALAV---LAHADIALYEAKNTGRNK 1137 Query: 367 TEVA 370 +A Sbjct: 1138 VVLA 1141 >UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D915_LARHH Length = 879 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 3/172 (1%) Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRH--NRDATLLIIDIDHFKSINDTW 259 H+ L ++ DG+TG+ NRR W E CRR+ D ++++DIDHFK +ND+ Sbjct: 697 HEDDLVKQASTDGLTGLANRRSWLVHANRELTRCRRYPDEADCAVVMLDIDHFKRVNDSH 756 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH VGD+ + L R++Q LR +D +GR GG+EFA+++ T + A R+ + + Sbjct: 757 GHAVGDQVLQELARRMQAGLRETDCLGRMGGEEFAILLPQTSQDGACLFAERLCRKIAGV 816 Query: 320 RLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + IS+GV+ + + L AD ALY AK GRNR E A Sbjct: 817 PFATEAGALVVTISLGVSQMQSDDASVDCALARADGALYAAKSGGRNRVEAA 868 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 3/167 (1%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 K R + M+ D +TG+YN+ + +L+ E D +R+ R +L+I DIDHFK IND +GH Sbjct: 335 KERFKAMAEIDTLTGIYNKGKFNHLLQVELDRSKRYGRPLSLIIFDIDHFKKINDAFGHQ 394 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 GD + L + + +R +D R+GG+EF ++ T E A ++ + + Sbjct: 395 AGDYVLKTLAKIVSSNIRSTDFFARWGGEEFVILAPETDLEGAQILAEKIRKAIEEYPFE 454 Query: 323 NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 +VT V A N + ++K AD+ALYKAK GRNR E+ Sbjct: 455 TVGKVTSSFGVTEAFENDTVDS---FVKRADVALYKAKDKGRNRVEI 498 >UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S6F8_SHEAM Length = 355 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/174 (36%), Positives = 99/174 (56%), Gaps = 16/174 (9%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEF----DNCRRHNRDATLLIIDIDHFKSINDTWG 260 L V+S D +TG+ NRR +E+ L EF C +LL+IDIDHFK NDTWG Sbjct: 189 ELSVISLTDKLTGLNNRRAFESRLAQEFLPSTPKC-------SLLVIDIDHFKQFNDTWG 241 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN--- 317 H+ GD+ +V + + L+ ++G D++ R+GG+EF +++ T AE A ++ + + Sbjct: 242 HNAGDKVLVYVAQNLKQAVKGEDLVARYGGEEFVIVLKDTSAEDAANIAEKLRDRIANKK 301 Query: 318 -TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 TL+ N + +S+GVA + ++ + AD ALY+AK GRNR +A Sbjct: 302 LTLKKDNLDLGKVSVSIGVAKAYANETP-EQFFERADGALYRAKGTGRNRVCLA 354 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 94/170 (55%), Gaps = 2/170 (1%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + RL+ S RD +TG++NRR+ E E +R+N +++ DIDHFK ND GHD Sbjct: 794 RERLENQSIRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGDIDHFKQFNDQLGHD 853 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 GD + + R LQ +RGSD+ R+GG+E +++ T E + + + + ++ + Sbjct: 854 AGDHVLKTIGRILQSNIRGSDIACRYGGEEMTIVLPQTSLEDTLVKAESLRQAIASMEVE 913 Query: 323 NTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + TL +S+GVA +++AD ALY+AK AGRNR +A Sbjct: 914 YKGKELGTLTVSLGVACYPNHGETMVNIIQAADRALYQAKAAGRNRVVMA 963 >UniRef50_A1W3W7 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID=A1W3W7_ACISJ Length = 388 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 12/179 (6%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR-DATLL--IIDIDHF 252 A LAE++ ++ RD +TG+YNRR +++ E CRR R TLL +ID+DHF Sbjct: 198 AEALAENR----ALAMRDELTGLYNRRAMVELIQLE---CRRRRRGQGTLLFAMIDVDHF 250 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 K +ND GH +GD + L+ +R +DV+ R+GGDEF +++S SA T + R Sbjct: 251 KRVNDHHGHAMGDHVLRVFADALRANVRETDVLARWGGDEFLLLLSDIEPRSAQTLLERT 310 Query: 313 HEGLNTLRLPNT-PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 E + L +PN P + L +S G+A P S +E L+ AD ALY AK GRNR +A Sbjct: 311 REAIAALPVPNAPPDLRLSMSAGLALHMPH-SSPQETLERADQALYAAKDQGRNRVALA 368 >UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCI9_GLUDA Length = 472 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 7/162 (4%) Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 D +T V NRR +++ E + R ++L +DIDHFK INDT+GH GD + A+ Sbjct: 299 DPLTRVLNRRFLPSIISYELRVAHQTGRPMSVLFLDIDHFKHINDTFGHAAGDSVLQAIA 358 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT--LRLP--NTPQVT 328 R L+ R SDVI R+GG+EF V+M T E + R+ + + +RLP N Q+T Sbjct: 359 RVLEEASRLSDVIFRYGGEEFLVLMGDTDTEQMLIGAERLRQKIENTPIRLPDGNLHQIT 418 Query: 329 LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + I +P Y E L++AD ALY+AK+ GRNR EVA Sbjct: 419 VSIGAAQYAGHPD---YEELLRAADAALYRAKRNGRNRIEVA 457 >UniRef50_B0SHT4 GGDEF domain protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHT4_LEPBA Length = 305 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 3/166 (1%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ ++ D +T + NRR + L+ +R NR++ L ++DIDHFK INDT+GHD+GD Sbjct: 138 LKRLAYMDELTMLPNRRSFADTLQKTIATVKRRNRESVLAVMDIDHFKVINDTYGHDIGD 197 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR--LPN 323 + + LR D +GR GG+EF I+ T E A + R+ E + T R + + Sbjct: 198 LVLKKMANIFVDCLREEDTVGRLGGEEFGCILPDTTTEGATIVLDRLRESVETHRFFIFD 257 Query: 324 TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + +S+G ++P + E LK AD+ALY+AK GRNR +V Sbjct: 258 NYYLNITLSIGYTKVHP-IQKPEEVLKFADIALYQAKNHGRNRIQV 302 >UniRef50_B0SDP7 GGDEF domain receiver component of a two-component response regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDP7_LEPBA Length = 406 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 3/154 (1%) Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 D +T +YNRRH+ET L EF R+N + +LLIIDID FK INDT+GH +GDE + + Sbjct: 135 DELTRLYNRRHFETALLREFKQSTRYNLNLSLLIIDIDDFKKINDTYGHLMGDEILKQIA 194 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRIS 332 ++ +LR D R GG+EFA+I + A+ A ++ E T+++ P + IS Sbjct: 195 SKISTSLRMEDTACRIGGEEFAIIFPQSNESQALKAAEKLLEACRTIQISGKP---VTIS 251 Query: 333 VGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 G+ ++ + AD ALY AK G+N+ Sbjct: 252 GGLVSYPEKVKRCEDMYDLADRALYTAKDTGKNQ 285 >UniRef50_A0L4N6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4N6_MAGSM Length = 863 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 98/174 (56%), Gaps = 2/174 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 + ++++ R L+ +TRD +TG+YN R +LR E + RHN LL++D+D+FK+ Sbjct: 427 SVKAISKYTRDLEFYATRDPLTGLYNHRILWELLRTEVERAHRHNHQFALLLVDLDNFKT 486 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 IND+ GH VGD+ ++A Q+ TLR D++GR GGDEF +++ A R+ Sbjct: 487 INDSHGHAVGDDLLIAFADQIGATLRQGDILGRHGGDEFVIMLPEVEEGVPFAAAERILS 546 Query: 315 GLNTLRLP--NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + +R+ + + + S+GVA + ++ AD ++KAK G++R Sbjct: 547 ATDKIRVQTHDGQSIGISASIGVAIFPDHANSAKDLFLFADNMMFKAKAEGKHR 600 >UniRef50_Q21GB7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GB7_SACD2 Length = 303 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/177 (36%), Positives = 106/177 (59%), Gaps = 5/177 (2%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 +LA + L ++ DG+T + NRR ++ ++ + RR + LL+IDIDHFK+ N Sbjct: 127 NQLARANKELMKLANHDGLTKILNRRGFDEVMDRYWRQARRDQSEIGLLLIDIDHFKAYN 186 Query: 257 DTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 DT+GH GDE + A+ ++ L R D+ R+GG+EFAV++ T E A+T R+ E Sbjct: 187 DTYGHVRGDETLSAVAHSIEKALMRPIDIAARYGGEEFAVLLPCTGMEGAMTVGDRILEA 246 Query: 316 LNTLRLPN--TP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + +P+ +P + L +S+GVA L+ ++ + +K AD ALY+AK+ GRNR + Sbjct: 247 IRDEAIPHLTSPVKSFLTVSIGVA-LSSGLASAEDLIKRADAALYQAKERGRNRVNI 302 >UniRef50_A6EXE2 Serine/threonine kinase with two-component sensor domain n=2 Tax=Gammaproteobacteria RepID=A6EXE2_9ALTE Length = 1684 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/169 (36%), Positives = 99/169 (58%), Gaps = 5/169 (2%) Query: 207 QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDE 266 Q ++ RDG+TGV NRR + L++ + RR + +++++D+DHFK ND +GH +GDE Sbjct: 1513 QRLADRDGLTGVANRRSGDAYLKDTWLRLRRQPQPLSVVMLDVDHFKHFNDNYGHQMGDE 1572 Query: 267 AIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH---EGLNTLRLP 322 ++ + LQ L R +D++ R+GG+EF +I+ T AI E L+ Sbjct: 1573 CLIRVAETLQAQLQRSTDMVARYGGEEFILILPNTDENGAIQVAENARVAIEALDIRHDH 1632 Query: 323 NTPQVTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRTEVA 370 +T + + +SVG A + P S E + +AD ALYKAK++GRNR + A Sbjct: 1633 STARDCITVSVGCATIVPDDKSSLEELVFAADAALYKAKESGRNRIQAA 1681 >UniRef50_Q1N6U5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N6U5_9GAMM Length = 564 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 106/183 (57%), Gaps = 4/183 (2%) Query: 187 LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 L G V+ +TA +L + L+++S+ D +TGVYNR E +++E +R+ D ++++ Sbjct: 385 LEGKVAKRTA-ELEQKNEELRLLSSTDRLTGVYNRMKLEEQIQHEISRAQRYKLDYSIVM 443 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAI 306 +D+D+FK++ND++GH VGD + +LQ +R SDV+GR+GG+EF + S T A++A Sbjct: 444 LDVDYFKNVNDSFGHQVGDRVLKMFAVELQNNVRESDVVGRWGGEEFIISCSCTNADNAF 503 Query: 307 TAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + ++ E + L + T V L + + AD ALY++K+ GRN+ Sbjct: 504 SLAEKLREIIEHLDFGSGIACTASFGVSQYQLEDSLE---SLISRADNALYESKRMGRNK 560 Query: 367 TEV 369 V Sbjct: 561 VSV 563 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AAP2 Protein adrA n=103 Tax=Enterobacteriaceae RepID=... 563 e-159 UniRef50_C1M7K1 Diguanylate cyclase AdrA n=9 Tax=Gammaproteobact... 476 e-133 UniRef50_A8GB07 Diguanylate cyclase n=7 Tax=Enterobacteriaceae R... 451 e-125 UniRef50_C4UJR8 Diguanylate cyclase n=4 Tax=Enterobacteriaceae R... 449 e-125 UniRef50_C6CCW8 Diguanylate cyclase n=3 Tax=Enterobacteriaceae R... 427 e-118 UniRef50_C6DCM6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae R... 423 e-117 UniRef50_B1J1G5 Diguanylate cyclase n=17 Tax=Pseudomonas RepID=B... 409 e-112 UniRef50_B2JNN3 Diguanylate cyclase n=1 Tax=Burkholderia phymatu... 395 e-108 UniRef50_B3PC25 YaiC/YhcK/ArdA family protein n=1 Tax=Cellvibrio... 381 e-104 UniRef50_A4WAF6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae R... 374 e-102 UniRef50_C7HYH7 Diguanylate cyclase n=1 Tax=Thiomonas intermedia... 371 e-101 UniRef50_C6CCY7 Diguanylate cyclase n=2 Tax=Enterobacteriaceae R... 369 e-101 UniRef50_Q6FA46 Putative uncharacterized protein n=1 Tax=Acineto... 349 1e-94 UniRef50_B5RJW5 MASE2 domain/diguanylate cyclase n=2 Tax=Klebsie... 347 5e-94 UniRef50_C5T000 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 336 6e-91 UniRef50_B4SNB1 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 336 8e-91 UniRef50_A9C166 Diguanylate cyclase n=3 Tax=Comamonadaceae RepID... 327 4e-88 UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 313 6e-84 UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 303 6e-81 UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID... 295 2e-78 UniRef50_C5T8S9 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 292 1e-77 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 278 2e-73 UniRef50_UPI0001AF38B9 GGDEF domain-containing protein n=1 Tax=P... 275 3e-72 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 270 8e-71 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 269 1e-70 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 266 1e-69 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 265 1e-69 UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio... 264 4e-69 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 263 6e-69 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 261 3e-68 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 260 5e-68 UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain prote... 260 5e-68 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 260 6e-68 UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammapr... 260 9e-68 UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 259 1e-67 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 259 1e-67 UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrery... 259 1e-67 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 1e-67 UniRef50_Q2BMK3 Serine/threonine kinase with two-component senso... 258 2e-67 UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwell... 258 3e-67 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 258 3e-67 UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii ... 257 4e-67 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 257 4e-67 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 257 5e-67 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 257 5e-67 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 257 5e-67 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 257 6e-67 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 257 6e-67 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 256 6e-67 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 256 7e-67 UniRef50_A4BIU7 Response regulator containing a CheY-like receiv... 256 8e-67 UniRef50_Q0F307 Sensory transduction system regulatory protein n... 256 8e-67 UniRef50_B8FCK6 Response regulator receiver modulated diguanylat... 256 9e-67 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 256 1e-66 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 256 1e-66 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 256 1e-66 UniRef50_Q2BP76 GGDEF domain protein n=1 Tax=Neptuniibacter caes... 255 1e-66 UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzer... 255 2e-66 UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthono... 255 2e-66 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 255 2e-66 UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 2e-66 UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 255 2e-66 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 255 2e-66 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 255 3e-66 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 255 3e-66 UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepI... 255 3e-66 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 253 5e-66 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 253 7e-66 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 253 9e-66 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 1e-65 UniRef50_Q21V79 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 253 1e-65 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 253 1e-65 UniRef50_Q2SPL7 Response regulator containing a CheY-like receiv... 252 1e-65 UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein... 252 2e-65 UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 T... 252 2e-65 UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 252 2e-65 UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 2e-65 UniRef50_Q21HV6 Response regulator receiver modulated diguanylat... 251 2e-65 UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 251 3e-65 UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobact... 251 3e-65 UniRef50_B9QXS2 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 251 3e-65 UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 251 3e-65 UniRef50_B7KGV0 Response regulator receiver modulated diguanylat... 251 3e-65 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 251 3e-65 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 251 3e-65 UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clos... 251 4e-65 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 250 5e-65 UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 250 5e-65 UniRef50_Q2SHG3 Response regulator containing a CheY-like receiv... 250 5e-65 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 250 5e-65 UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 250 6e-65 UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 250 8e-65 UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longb... 250 8e-65 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 250 8e-65 UniRef50_Q04S93 GGDEF domain receiver component of a two-compone... 250 9e-65 UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC... 250 9e-65 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 249 1e-64 UniRef50_Q2IF81 Response regulator receiver modulated diguanylat... 249 1e-64 UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 249 1e-64 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 249 1e-64 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Synt... 249 1e-64 UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptu... 249 1e-64 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 249 1e-64 UniRef50_B7GIF3 Response regulator with a diguanylate cyclase ou... 249 1e-64 UniRef50_Q2BZB4 Putative uncharacterized protein n=2 Tax=Photoba... 249 1e-64 UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 249 2e-64 UniRef50_B8GR45 Diguanylate cyclase with PAS/PAC sensor n=27 Tax... 248 2e-64 UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobac... 248 2e-64 UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geob... 248 2e-64 UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testostero... 248 3e-64 UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthono... 248 3e-64 UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7... 248 4e-64 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 247 4e-64 UniRef50_Q0VQ38 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q... 247 4e-64 UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors... 247 4e-64 UniRef50_A8L354 Serine/threonine protein kinase n=1 Tax=Frankia ... 247 5e-64 UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 247 5e-64 UniRef50_A7N081 Putative uncharacterized protein n=6 Tax=Vibrio ... 247 5e-64 UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuni... 247 6e-64 UniRef50_D1U6K0 Diguanylate cyclase with PAS/PAC sensor and heme... 246 6e-64 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 246 6e-64 UniRef50_C0QMB4 ABC-type nitrate/sulfonate/bicarbonate transport... 246 7e-64 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 246 7e-64 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 246 8e-64 UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nit... 246 8e-64 UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 246 8e-64 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 246 9e-64 UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=... 246 1e-63 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 246 1e-63 UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 246 1e-63 UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 246 1e-63 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 246 1e-63 UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 246 1e-63 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 2e-63 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 245 2e-63 UniRef50_B4B7Z8 Response regulator receiver modulated diguanylat... 245 2e-63 UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Nep... 245 2e-63 UniRef50_D1B074 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 245 2e-63 UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum ... 245 2e-63 UniRef50_A6Q482 Putative uncharacterized protein n=1 Tax=Nitrati... 245 2e-63 UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 245 2e-63 UniRef50_A1STZ3 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 245 2e-63 UniRef50_A0L7G7 Response regulator receiver modulated diguanylat... 245 2e-63 UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 245 2e-63 UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=... 245 2e-63 UniRef50_Q1K456 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 2e-63 UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocy... 245 2e-63 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 245 3e-63 UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacte... 245 3e-63 UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 245 3e-63 UniRef50_D2BVU6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 3e-63 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 3e-63 UniRef50_Q2VZ27 Response regulator containing a CheY-like receiv... 245 3e-63 UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanoph... 244 3e-63 UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 244 3e-63 UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromob... 244 3e-63 UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 244 4e-63 UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax... 244 4e-63 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 244 5e-63 UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 243 6e-63 UniRef50_A7BV03 Sensor protein n=2 Tax=Beggiatoa sp. PS RepID=A7... 243 6e-63 UniRef50_Q31E96 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 243 7e-63 UniRef50_Q47Y21 GGDEF domain protein n=1 Tax=Colwellia psychrery... 243 8e-63 UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliob... 243 8e-63 UniRef50_Q2BML0 Putative diguanylate cyclase (GGDEF domain) n=1 ... 243 9e-63 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 243 1e-62 UniRef50_C1XM61 Diguanylate cyclase (GGDEF) domain-containing pr... 243 1e-62 UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 242 1e-62 UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkong... 242 1e-62 UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 R... 242 1e-62 UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthom... 242 2e-62 UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfoc... 242 2e-62 UniRef50_A8FZW4 Sensory transduction system, regulatory protein ... 241 2e-62 Sequences not found previously or not previously below threshold: UniRef50_UPI0001C3940A response regulator receiver modulated dig... 259 1e-67 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 258 2e-67 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 258 3e-67 UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (... 257 5e-67 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 254 4e-66 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 253 7e-66 UniRef50_B7K273 Response regulator receiver modulated diguanylat... 253 8e-66 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 253 9e-66 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 253 1e-65 UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors... 252 1e-65 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 252 2e-65 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 252 2e-65 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 251 2e-65 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 251 3e-65 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 251 4e-65 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 251 4e-65 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 250 6e-65 UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain prote... 250 6e-65 UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3... 250 8e-65 UniRef50_A1WTZ7 Response regulator receiver modulated diguanylat... 250 8e-65 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 250 9e-65 UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legione... 249 1e-64 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 249 1e-64 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 2e-64 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 248 2e-64 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 248 2e-64 UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece ... 248 2e-64 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 248 2e-64 UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 248 3e-64 UniRef50_A0YVI7 Regulatory components of sensory transduction sy... 248 3e-64 UniRef50_A0YNV2 Regulatory component of sensory transduction sys... 247 4e-64 UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromato... 247 4e-64 UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 247 4e-64 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 247 5e-64 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 247 6e-64 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 247 6e-64 UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121... 247 6e-64 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 246 7e-64 UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax... 246 7e-64 UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteoba... 246 8e-64 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 246 1e-63 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 246 1e-63 UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing pr... 245 2e-63 UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammap... 245 2e-63 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 2e-63 UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales Rep... 245 2e-63 UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 245 2e-63 UniRef50_A7BWA5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Be... 245 3e-63 UniRef50_Q089K4 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 245 3e-63 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 245 3e-63 UniRef50_B0C2A7 Diguanylate cyclase (GGDEF domain), putative n=4... 244 3e-63 UniRef50_Q1Q3F0 Putative uncharacterized protein n=1 Tax=Candida... 244 4e-63 UniRef50_B7K319 Response regulator receiver modulated diguanylat... 243 5e-63 UniRef50_B7KCD2 Diguanylate cyclase with PAS/PAC and GAF sensors... 243 5e-63 UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thioox... 243 6e-63 UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain... 243 6e-63 UniRef50_Q47FN5 Response regulator receiver modulated diguanylat... 243 7e-63 UniRef50_B5VVN4 Response regulator receiver modulated diguanylat... 243 7e-63 UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=... 243 8e-63 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 243 9e-63 UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 243 9e-63 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 243 1e-62 UniRef50_A3YBD7 Regulatory component of sensory transduction sys... 243 1e-62 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 243 1e-62 UniRef50_B2A6L1 Response regulator receiver modulated diguanylat... 243 1e-62 UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnet... 243 1e-62 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 242 1e-62 UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 242 1e-62 UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluores... 242 1e-62 UniRef50_A4BG19 GGDEF domain protein n=1 Tax=Reinekea blandensis... 242 2e-62 UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flag... 242 2e-62 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 241 2e-62 UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thala... 241 2e-62 >UniRef50_P0AAP2 Protein adrA n=103 Tax=Enterobacteriaceae RepID=ADRA_ECOL6 Length = 371 Score = 563 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 371/371 (100%), Positives = 371/371 (100%) Query: 1 MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTL 60 MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTL Sbjct: 1 MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTL 60 Query: 61 VSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNV 120 VSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNV Sbjct: 61 VSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNV 120 Query: 121 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPI 180 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPI Sbjct: 121 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPI 180 Query: 181 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR 240 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR Sbjct: 181 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR 240 Query: 241 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT 300 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT Sbjct: 241 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT 300 Query: 301 PAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 PAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK Sbjct: 301 PAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 Query: 361 KAGRNRTEVAA 371 KAGRNRTEVAA Sbjct: 361 KAGRNRTEVAA 371 >UniRef50_C1M7K1 Diguanylate cyclase AdrA n=9 Tax=Gammaproteobacteria RepID=C1M7K1_9ENTR Length = 366 Score = 476 bits (1226), Expect = e-133, Method: Composition-based stats. Identities = 280/366 (76%), Positives = 312/366 (85%) Query: 6 MNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPP 65 MNDENF++K E L QN+HQRSGLRFARR+RLPRAVGL GMF PIAS LVS P Sbjct: 1 MNDENFYQKKVVPNEAFILLHQNDHQRSGLRFARRIRLPRAVGLGGMFFPIASVLVSQPI 60 Query: 66 PGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTA 125 G WWL+LVGWAFVWPHLAWQ+AS+A+DPL E NLK DA+LAG+W+G+MG+N+LPSTA Sbjct: 61 TGGWWLLLVGWAFVWPHLAWQLASKAIDPLHSEYTNLKADAILAGIWMGIMGINLLPSTA 120 Query: 126 MLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYP 185 +LMI+C+NLMGAGG R+F+AG VLMVVSCLVTL+LT I V+F+S L LSLP++V+YP Sbjct: 121 LLMIICINLMGAGGMRVFIAGAVLMVVSCLVTLQLTDIPVAFSSTQLSVLLSLPVLVVYP 180 Query: 186 LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 LLF WVSYQT +LAEHKRRLQVMSTRDGMTGVYNRRHWE +LRNEFDNCRRH RDATLL Sbjct: 181 LLFAWVSYQTLIRLAEHKRRLQVMSTRDGMTGVYNRRHWELLLRNEFDNCRRHQRDATLL 240 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA 305 IIDIDHFKSINDTWGHDVGD+AIVALTRQLQ+TLRGSDVIGRFGGDEFAVIM GT A SA Sbjct: 241 IIDIDHFKSINDTWGHDVGDQAIVALTRQLQMTLRGSDVIGRFGGDEFAVIMCGTSASSA 300 Query: 306 ITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 I AM RVHE L LRL PQV LRISVGVAPL + HYREWLKSAD+ALYKAK +GRN Sbjct: 301 IAAMSRVHERLTQLRLSCAPQVDLRISVGVAPLTSETEHYREWLKSADMALYKAKNSGRN 360 Query: 366 RTEVAA 371 RTE AA Sbjct: 361 RTEAAA 366 >UniRef50_A8GB07 Diguanylate cyclase n=7 Tax=Enterobacteriaceae RepID=A8GB07_SERP5 Length = 353 Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 163/342 (47%), Positives = 221/342 (64%) Query: 29 EHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIA 88 + +RSGL FARR LPR VGL F+ + S + W W +L+ F+WPHLA+Q A Sbjct: 8 DTRRSGLSFARRTYLPRVVGLGIGFICVFSVFYTQKTSYWVWGLLIFHGFIWPHLAYQWA 67 Query: 89 SRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLV 148 R+ P EI NL D+ G+WV +M N LPS +L +M +N M + G LF GL Sbjct: 68 RRSAMPFKAEIRNLLIDSFFGGLWVAMMAFNALPSVVILSMMGMNNMASAGKSLFFKGLA 127 Query: 149 LMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQV 208 + V+S L L G S PL+ +L LP+I YP+L G V+Y+TA +LAE K+ L Sbjct: 128 VQVLSALAISALLGFPFQPQSTPLQIYLCLPMIYFYPILLGLVTYRTAKRLAEKKQELLR 187 Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 +S RDG+TG+YNRRHWE +L ++FD+CRR+ ATL+++DIDHFK+INDT+GH +GDEA+ Sbjct: 188 ISMRDGLTGLYNRRHWEHLLHHQFDSCRRYQHSATLILMDIDHFKTINDTFGHALGDEAL 247 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT 328 L +L I LR D++GR+GGDEF ++ T AE A A+LR+ E LN + PQ+ Sbjct: 248 AVLAEELLIGLRAVDIVGRYGGDEFGAVLPNTSAEQASIALLRIQERLNEIVFREAPQLR 307 Query: 329 LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L IS G+A + MS Y +WLK+AD ALY+AK GRNR E+A Sbjct: 308 LNISAGIADYHGDMSGYLDWLKAADNALYRAKNNGRNRLELA 349 >UniRef50_C4UJR8 Diguanylate cyclase n=4 Tax=Enterobacteriaceae RepID=C4UJR8_YERRU Length = 372 Score = 449 bits (1155), Expect = e-125, Method: Composition-based stats. Identities = 152/361 (42%), Positives = 226/361 (62%) Query: 10 NFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWW 69 F K G + L + ++SG+ FA+R+ +PR GL L + S L++ P W Sbjct: 11 AFLKIRLNWGHQLSLYSRANSRQSGVHFAKRIYIPRIFGLGIGMLCVTSVLITQAMPVWI 70 Query: 70 WLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMI 129 WL+L+ +WPH+A+Q++ A P +E+ NL D++L G WV VM N LPS +L + Sbjct: 71 WLLLMINGLIWPHVAYQLSINADFPHRQELINLSIDSILGGTWVAVMSFNALPSVVILSM 130 Query: 130 MCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFG 189 M +N + +GG LF+ GL+L + S L+ L ++ + + + LP+I IYP L G Sbjct: 131 MSMNNIASGGKSLFIKGLLLQISSSLLVFWLFNLSFQPETTISQVYSCLPMIFIYPSLLG 190 Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 WV++ TA +L E+K L +S RDG+TG+YNRRHWE L N+FD+CRR+ ++L++IDI Sbjct: 191 WVTFHTAKRLVENKEELLRISVRDGLTGLYNRRHWEHQLHNQFDSCRRYKHCSSLVLIDI 250 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 D FK+INDT+GH VGD+AI L +L + LR D++GR+GGDEF I+ T AE A + Sbjct: 251 DQFKTINDTYGHTVGDDAITVLAEELLLGLRAIDIVGRYGGDEFGAILPNTTAEQAREVL 310 Query: 310 LRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 R+ L + +P + L+IS GVA P+M++Y++WLK+ D ALY AK GR+R E+ Sbjct: 311 TRIQGKLAEIEFKQSPGLQLKISAGVAEFKPEMANYQQWLKAVDSALYHAKNNGRDRIEL 370 Query: 370 A 370 A Sbjct: 371 A 371 >UniRef50_C6CCW8 Diguanylate cyclase n=3 Tax=Enterobacteriaceae RepID=C6CCW8_DICDC Length = 371 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 156/345 (45%), Positives = 232/345 (67%) Query: 20 EEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFV 79 ++E +R+GL FARRV +PRA+GL F +A+ L P W W +LV F+ Sbjct: 4 SSSITYAESERRRTGLAFARRVYMPRAIGLGLGFFYVAAALYGRQLPVWAWGLLVAHGFL 63 Query: 80 WPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGG 139 WPH+A+ ++SRA DP+ RE NL DA G+W+GVMG+N LPS ++ +M +N + AGG Sbjct: 64 WPHIAYLVSSRARDPMRREYGNLLIDAAFGGIWIGVMGLNGLPSVLIMSMMGMNNIAAGG 123 Query: 140 PRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKL 199 +LF+ GL + V+ V L L ++ + ++ + LP++ IYP+ G V+Y+TA KL Sbjct: 124 LKLFLQGLGVQVLCVAVFLLLIQSPINTATTTIQLYFCLPMLFIYPISVGLVTYRTAMKL 183 Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 AEHKRRL+ MS DGMT +YNR+HWE +L+NEFD C R+ R ATL ++D+DHFK+IND + Sbjct: 184 AEHKRRLKEMSIHDGMTRLYNRQHWEQLLQNEFDICARYQRVATLALLDVDHFKTINDNF 243 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH VGD+A++ L+ L+ TLR +D+IGRFGGDEF ++ T + A + R+ E L ++ Sbjct: 244 GHHVGDDALLLLSNGLKSTLRQADIIGRFGGDEFGIVFPETRVDEARLVVERLREYLESV 303 Query: 320 RLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 +L +TP + + IS G+ + +MS +R W+++AD+ALY+AK GR Sbjct: 304 QLHHTPLLRIGISAGLVQFSSEMSDHRAWMRAADMALYQAKNRGR 348 >UniRef50_C6DCM6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae RepID=C6DCM6_PECCP Length = 353 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 169/350 (48%), Positives = 240/350 (68%) Query: 21 EPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVW 80 PP + +RSGLRF++RV +PR VG L IAS L++ P P W +L+ AF W Sbjct: 4 SPPTFLTVDVRRSGLRFSQRVYIPRIVGTILCSLFIASVLITKPIPLLLWGLLLLNAFAW 63 Query: 81 PHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGP 140 PH+A+ ++ R+ DP+ E NL D V G+W+G MGVN+LPS + ++ +N GG Sbjct: 64 PHIAYLLSLRSRDPMRCEKRNLLFDVVFGGIWIGFMGVNLLPSAVIAAMVGMNGTAGGGI 123 Query: 141 RLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLA 200 +LFV G++L V+C+ L L + VS ++ P++ + +P+++IYP+ G+V+Y TA KLA Sbjct: 124 KLFVQGILLQCVACVSVLVLFAVPVSLDTTPIQIYACVPMLLIYPIFLGYVTYNTALKLA 183 Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 EHKR L +S DGMT +YNR HWE +L++EFD C+R+ R ATL++ DIDHFK+ ND +G Sbjct: 184 EHKRMLMEVSIHDGMTNLYNRHHWERLLKHEFDLCQRYKRTATLVLFDIDHFKAFNDNFG 243 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H+VGD+AI+ L R+L R +DVIGRFGGDEFAVI+ T A A+ A+ R+ E L+ Sbjct: 244 HNVGDQAILLLARELTSGFRETDVIGRFGGDEFAVILPQTSAGEALDAVSRIRESLSLKF 303 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L TPQ+ + +SVG+A ++P+M Y +WLKSAD+ALY+AK GR RTEVA Sbjct: 304 LNQTPQLAVFVSVGIAEISPEMGQYMDWLKSADMALYRAKNKGRRRTEVA 353 >UniRef50_B1J1G5 Diguanylate cyclase n=17 Tax=Pseudomonas RepID=B1J1G5_PSEPW Length = 361 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 131/340 (38%), Positives = 196/340 (57%) Query: 28 NEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQI 87 + GL F RR+ LPR +GL +A+ + PP W WL+L+ +WPHLA+Q Sbjct: 2 DNRSGKGLSFVRRIYLPRVIGLGIGLFSVAAAVAPLSPPTWAWLLLLFNGLLWPHLAYQW 61 Query: 88 ASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGL 147 A R++ P E NL D+++ G W M N LP +L +M +N + AGG RL + GL Sbjct: 62 ARRSIAPYQAEQRNLLLDSLMGGFWTAAMHFNPLPCVTVLSMMTMNNVAAGGKRLVLRGL 121 Query: 148 VLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQ 207 + +V L+ L G + ++ PL+ + LP++ +YPL GWV Y+ A KLAEHKRRL+ Sbjct: 122 MAQLVGVLLASALLGTGLQLDATPLQIYACLPMLTLYPLALGWVCYRLAIKLAEHKRRLR 181 Query: 208 VMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEA 267 +S D +TG+ N W+ +L F C+ + + +IDIDHFK+INDT+GH VGD Sbjct: 182 DLSLTDSLTGLLNHGAWKDLLLLRFQACQNLQMPSVIALIDIDHFKTINDTFGHVVGDCV 241 Query: 268 IVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV 327 + ++ +L+ LR D+ GR+GGDEF VI+ T A AM R+ E + R P P + Sbjct: 242 LRKMSDELRRNLRAGDLAGRYGGDEFCVILPDTSESEARQAMERLRERIVCYRDPQLPHL 301 Query: 328 TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + +S+G++ + WL+ AD ALY AK+ GR++ Sbjct: 302 KISLSIGMSSFRADLQSPEHWLEKADKALYCAKRRGRDQV 341 >UniRef50_B2JNN3 Diguanylate cyclase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JNN3_BURP8 Length = 359 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 129/337 (38%), Positives = 180/337 (53%) Query: 33 SGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAV 92 G F RV R GL F +AS LV W +LV FVWPH+A + A Sbjct: 11 QGKSFVERVYRLRIAGLGLGFFCVASVLVLQHRGAVLWSLLVFHGFVWPHVARRAALACE 70 Query: 93 DPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVV 152 P E NL DA+ G WV M NVLP+ +L ++ +N +GAGG LF G++ V+ Sbjct: 71 VPFRGEHLNLMIDAMFGGFWVVAMRFNVLPAALILAMVSMNNIGAGGLPLFARGVIAHVL 130 Query: 153 SCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTR 212 LV L G S S LP ++IYPL G+ SY+ + KLA+ R L+ +S Sbjct: 131 GVLVGLVTVGFMFSPMSQMPTILACLPFLLIYPLALGFTSYRLSLKLAQRTRELEHLSRT 190 Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 DG+T ++NRRHWE +L +EF+ CR + + L++ID+DHFK INDT GH GD + + Sbjct: 191 DGLTRLWNRRHWEGLLADEFERCRANRYASCLMLIDLDHFKRINDTMGHPAGDAVLQSFA 250 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRIS 332 L+ RG D IGR+GG+EF V++ G A T + + + + + IS Sbjct: 251 DLLRSHFRGGDSIGRYGGEEFGVVLPGATLREAHTIAKVLVQRVREKTKEASKECPCTIS 310 Query: 333 VGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 VG+A L + Y WL+ D +LY+AK GR+R V Sbjct: 311 VGIAQLTDDLPDYHTWLQEVDRSLYQAKATGRDRIVV 347 >UniRef50_B3PC25 YaiC/YhcK/ArdA family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC25_CELJU Length = 330 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 115/323 (35%), Positives = 191/323 (59%), Gaps = 10/323 (3%) Query: 56 IASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGV 115 + +TL P W W +L FVWPH+A+ +A R+ P RE +L+ DA G WV + Sbjct: 2 VGATLYPLKQPAWIWALLFLNGFVWPHIAYWLAKRSQSPFLREHLHLQLDAASGGFWVAL 61 Query: 116 MGVNVLPSTAMLMIMCLNLMGAGGPRLFVAG----LVLMVVSCLVTLELTGITVSFNSAP 171 MG N L S +LM++ +N + AGG RLF+ G L +++ LV + +S P Sbjct: 62 MGFNPLGSCLILMMLWMNNIAAGGFRLFLRGVVTSLAGLLMGLLVVRSFLHWEFNLSSDP 121 Query: 172 LEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNE 231 + + +LP++VIYPL G ++Y+ A +L K L+ +S DG+TG++NR +WE + Sbjct: 122 VMIYAALPMLVIYPLAIGSITYRFAMQLHSQKELLKHLSRTDGLTGLFNRSYWEERVLAL 181 Query: 232 FDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGD 291 + +R + L+++D+DHFK INDT+GH GD+ + + + LQ+ LR +++GR+GG+ Sbjct: 182 INQTQRSGQPLCLVLLDVDHFKMINDTYGHGRGDQILQQIAQCLQVNLREHELLGRYGGE 241 Query: 292 EFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTL-----RISVGVAPLNPQMSHYR 346 EFA+ ++ T +A+ R+ + + T+ + + L IS+G+AP P + + Sbjct: 242 EFALALANTSLPAALATAERLRQAVATMNFADEHEPRLAPLCCSISLGLAPWQPGI-SFL 300 Query: 347 EWLKSADLALYKAKKAGRNRTEV 369 EW ++AD ALY+AK+ GRNR+ + Sbjct: 301 EWQRAADQALYQAKREGRNRSCI 323 >UniRef50_A4WAF6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae RepID=A4WAF6_ENT38 Length = 351 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 113/341 (33%), Positives = 179/341 (52%) Query: 27 QNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQ 86 +H+ G RF +R+ L R +G F+PI + L+ H W L+L AFVWP +AW+ Sbjct: 8 SKQHRLPGNRFVKRMFLMRILGTFLCFIPILTVLIQHQRSEWLMLLLAFNAFVWPTVAWR 67 Query: 87 IASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAG 146 A R+V PL+ E NL DA G W+ +M VN LPS + I+ + + AGG L Sbjct: 68 RARRSVTPLATEHQNLVVDAGAGGFWIAMMAVNPLPSVVIATILLADRLSAGGFVLMRKA 127 Query: 147 LVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRL 206 V M+V L + G+ V + + +LP+I IY + ++ A +L R L Sbjct: 128 AVAMLVVFLAAWLMQGMAVVMTVSQQTMFATLPLIAIYIIALSVMTDSIAIRLRVKSREL 187 Query: 207 QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDE 266 + ++ D + + NRR E + E ++ +R++ L+ IDID+FK +ND +GH VGD Sbjct: 188 ERIAMMDPLLDIANRRLLEKRIEKELKTLQQASRESALMFIDIDNFKEVNDRFGHKVGDT 247 Query: 267 AIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ 326 + ++ L + R +D R GGDEF +++ T E A R+ E + Sbjct: 248 LLATVSEILHLATRQTDTPARLGGDEFVILLPNTSIEEAHVVASRIMEAAAVMDDVAEEA 307 Query: 327 VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 V +S+G+A +M + +WL++AD ALY+AK+ G+NR Sbjct: 308 VNCTLSIGIAGATREMENVTDWLQAADTALYQAKRGGKNRI 348 >UniRef50_C7HYH7 Diguanylate cyclase n=1 Tax=Thiomonas intermedia K12 RepID=C7HYH7_THIIN Length = 368 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 109/329 (33%), Positives = 174/329 (52%) Query: 39 RRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSRE 98 RR+ R VG+ L IA L+ W W +++ +WP +A A + D E Sbjct: 24 RRIYPLRVVGMGLGGLAIAGVLIEQHAHPWRWALMIVSCLLWPQIALLRARLSADSYRAE 83 Query: 99 IYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTL 158 +NL D+ +AGMWV +M N+LPS ++ + + + +G RL++ L + + ++T Sbjct: 84 KHNLLIDSAIAGMWVALMHFNLLPSVVLVTVTTFDKLSSGMRRLWLISLPGLFGAAVLTA 143 Query: 159 ELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV 218 + V S+ L +LP++V++ L SY+ ++ L+ + D TG+ Sbjct: 144 LILRPPVQLESSLLIVACTLPLLVVHTLSSSIGSYRLIRTVSRQNTLLEQLRRTDAQTGL 203 Query: 219 YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQIT 278 + R HW+ + + A LL+ID+DHFK +NDT+GH GD+AI A+ + ++ Sbjct: 204 FARDHWQQQADAALQLFQAVGQPACLLMIDVDHFKQVNDTYGHTAGDDAIRAVGQLIRDC 263 Query: 279 LRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPL 338 +R D GR+G DEFAV+ T A+ R+ L TLRLP+ P V L S+GVA Sbjct: 264 IREEDCAGRYGDDEFAVLCQNTGQPDALGIAERIRTELLTLRLPHHPNVRLSSSIGVAAA 323 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNRT 367 P S+ + W+++AD ALY AK GRN+ Sbjct: 324 APAFSNLQAWMQAADAALYSAKHQGRNQV 352 >UniRef50_C6CCY7 Diguanylate cyclase n=2 Tax=Enterobacteriaceae RepID=C6CCY7_DICDC Length = 359 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 123/348 (35%), Positives = 180/348 (51%), Gaps = 2/348 (0%) Query: 20 EEPPLTPQNEHQR-SGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAF 78 P +P +H + RF RR+ L R +G F PIAS L +L+LV AF Sbjct: 3 TLPYYSPDTDHLKLRAFRFIRRMFLMRQLGTFLCFFPIASVLYELSRSWPLFLLLVLNAF 62 Query: 79 VWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAG 138 VWPH+A+ ++S A DP+ E N+ D G WV +MGV LPS ++ I+ + AG Sbjct: 63 VWPHIAYAVSSHARDPVKAEFINMTLDTAFGGAWVALMGVCPLPSAIIISILIADRYAAG 122 Query: 139 GPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATK 198 G +L V VS ++ L + WL+LP+ IY + VSYQ A + Sbjct: 123 GWKLLRMSTVASFVSFILVWTLLRFEHYTVLSERTLWLTLPLSTIYMITLSVVSYQLAAR 182 Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L E R L+ ++ D + NRR +E L EF +R A L++ID+DHFK +ND+ Sbjct: 183 LREKSRELERITLMDPYLSIPNRRLFEQRLDKEFLRTQRGESHAYLMLIDVDHFKYVNDS 242 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 +GH+ GD + ++ L+ DV RFGGDE +I+ + + ++H + T Sbjct: 243 YGHEAGDYLLTEISVVLRNIAGKYDVPARFGGDELGIIIQNSTDKIVTMTAHQLHAKVAT 302 Query: 319 LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 +RLP P IS+G+A + + WL SAD ALY AKK+G+NR Sbjct: 303 IRLPADPTFCCTISIGIARA-EHAATPQSWLNSADQALYAAKKSGKNR 349 >UniRef50_Q6FA46 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FA46_ACIAD Length = 352 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 101/333 (30%), Positives = 165/333 (49%), Gaps = 1/333 (0%) Query: 33 SGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAV 92 R+ R+ + R +G F I S L +++L AFVWP A+ A Sbjct: 16 RSKRYVFRIFVMRQIGTILCFFSIFSVLYYLNYHEIIYVLLALNAFVWPIAAYLYAKNKK 75 Query: 93 DPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVV 152 D + +L DA L GMWV +M ++ LPS M+ I+ + AGG ++ L+ M+ Sbjct: 76 DGVRTTNISLIVDAALGGMWVAIMKISPLPSLIMVAILVSDRFAAGGWQILRPSLIAMLG 135 Query: 153 SCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTR 212 L+ TG V+ + + W SLP+ IY + ++ + A +L + R + ++ Sbjct: 136 IFLIFWSFTGFQVNLSFNEMMVWSSLPLATIYLISLSILTRKLAVQLIQKNREFERIALM 195 Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 D + NRR +E L + F +R+ A L+++D+DHFK INDT+GH+ GD + ++ Sbjct: 196 DPRLHIPNRRLFEQRLSSIFMQTQRNASSAHLILLDVDHFKKINDTYGHEAGDYFLAEMS 255 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRIS 332 L+ + D RFGGDE A+I+ E I R+ + +RL + P+ + +S Sbjct: 256 SILRELIGPKDTPARFGGDELAIIVVDQSNEEIILLARRIKNSIQQIRLQSDPEFSTTVS 315 Query: 333 VGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 +G+A + W AD ALY+ K+ GRN Sbjct: 316 IGIASA-ETVDTVSAWFALADKALYQVKRNGRN 347 >UniRef50_B5RJW5 MASE2 domain/diguanylate cyclase n=2 Tax=Klebsiella pneumoniae 342 RepID=B5RJW5_KLEP3 Length = 352 Score = 347 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 97/330 (29%), Positives = 166/330 (50%), Gaps = 1/330 (0%) Query: 36 RFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPL 95 F +RV R +G+ FLPI S L +L+ A WP +A+ + + D L Sbjct: 17 SFIKRVYFLRQIGVVLCFLPIYSVLQEQSHQKITIALLILNALTWPSVAYLASMMSKDML 76 Query: 96 SREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCL 155 S E N+ D+ AG+W+ VM V+ +PS ++ + + AGG ++ L+ M++ L Sbjct: 77 STEKKNMILDSFWAGIWIAVMQVSPIPSLFIISVQIADRYAAGGWKILKPALMWMMIGFL 136 Query: 156 VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGM 215 + + LSLP+ YP++ VS + KL + + L+ + D Sbjct: 137 TVWLANDFKYTIEFSTRTVLLSLPLATCYPIVLSIVSRHLSIKLRKRRELLEKQALMDPG 196 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQL 275 + NRR +E + + F R+ + L++ID+D+FK INDT+GH+VGD + ++ L Sbjct: 197 LDLPNRRFFEQKMESAFRATRKKRIHSYLMLIDVDNFKKINDTYGHEVGDAVLSRISTIL 256 Query: 276 QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGV 335 + DV RFGGDE A+I++ + ++ I + + E + L LP+ + +S+G+ Sbjct: 257 RECAGEKDVPARFGGDELAIIVNNSNSKLVIAMVHIIQEKIKDLSLPSHNDIYCTVSIGI 316 Query: 336 APLNPQMSHYREWLKSADLALYKAKKAGRN 365 + EW+K AD LY+ K+ G+N Sbjct: 317 SCA-ENKESIIEWIKEADEMLYEVKRNGKN 345 >UniRef50_C5T000 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T000_ACIDE Length = 350 Score = 336 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 103/335 (30%), Positives = 170/335 (50%) Query: 33 SGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAV 92 + +RRV R +G+ L + + L W + +F+WPH+A+Q + + Sbjct: 4 PRRQLSRRVYPLRVLGMGLGGLVVGTVLWEQRAGWGPWAWMALVSFIWPHVAYQFSRLSG 63 Query: 93 DPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVV 152 +P EI NL D+ L V +M N+LPS ++ + ++ + G L++ L M V Sbjct: 64 EPYRAEIRNLLLDSALVTALVPLMHFNLLPSVLLITLTVVDKITTGIRGLWLRSLPGMAV 123 Query: 153 SCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTR 212 L LTG + ++ LP++ ++ + SY+ +++ + L + Sbjct: 124 GMLAGGALTGFEWAPTTSMPVIIACLPVMALHTVSVSVASYRLIRQVSRQNQLLDELRRI 183 Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 D +TG+Y R HW+ A L+++DIDHFK IND GH VGDEAI AL Sbjct: 184 DALTGLYGRGHWQEQAEAALRLHHATGEPACLVMLDIDHFKQINDLHGHTVGDEAIRALA 243 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRIS 332 ++ +R +D GR+GGDEFA+++ G + A+ R+ E + +RL + P++ S Sbjct: 244 HIVRSNVRTTDCAGRYGGDEFAIVLRGMHMDKALAVAQRICEQVQAMRLHDMPELQFTSS 303 Query: 333 VGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 +GVA + + S R W +AD LY+AK +GRNR Sbjct: 304 LGVAAADHRHSSLRAWTDAADAELYQAKASGRNRV 338 >UniRef50_B4SNB1 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SNB1_STRM5 Length = 350 Score = 336 bits (862), Expect = 8e-91, Method: Composition-based stats. Identities = 99/345 (28%), Positives = 160/345 (46%), Gaps = 1/345 (0%) Query: 21 EPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVW 80 P L E G+ ARR+ R VG +PIAS ++ W W++L+ A W Sbjct: 1 MPFLIDATEVAVEGIGAARRIGWMRFVGNGLGAIPIASIILERQDGAWAWVLLLLNALAW 60 Query: 81 PHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGP 140 P LA + R+ P + + D+ G W+ M ++ +PS ++ + + AGG Sbjct: 61 PALALLLTHRSRQPAVVQFRCMVADSFFGGGWIAFMALSAVPSALFAALLVADKIAAGGV 120 Query: 141 RLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLA 200 RL + + +V+ L++ G S+ LS+P + +Y + +S+Q A ++ Sbjct: 121 RLAMRATLALVLGFLLSWWALGFPYQPISSQRTIVLSVPFLFVYGIGLSILSWQLARRVK 180 Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 R+LQ +S D + + NR + D + A LL++D+D FK IND+ G Sbjct: 181 SQNRQLQRLSRMDPLVELANRGFLILRAQQVLDKAQGQGGFACLLMLDVDDFKRINDSHG 240 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H GDE + + L+ R D+ R GGDEF V++ A+ R+ L Sbjct: 241 HRAGDEVLRQIAATLREFARPGDIPARLGGDEFVVLLRDCTTRDAMHVAERIRLHLLEAA 300 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 P V +S+G+A P +WL +AD ALY AK+ G+N Sbjct: 301 RQVAPGVEFSVSIGIAA-TPGQGTVEDWLATADKALYHAKRQGKN 344 >UniRef50_A9C166 Diguanylate cyclase n=3 Tax=Comamonadaceae RepID=A9C166_DELAS Length = 386 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 110/336 (32%), Positives = 172/336 (51%) Query: 36 RFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPL 95 R RR R +A L + + + W ++ A VWPH+A+ A + D Sbjct: 6 RIHRRTYPLRVSSMALGGLVVGTAMTEMGASPAVWGFVLVSALVWPHIAFLHARHSRDSH 65 Query: 96 SREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCL 155 E NL+ DA++ G W+ VM LPS A+L I + ++ LV +++ Sbjct: 66 RAEHANLQIDALIIGSWIPVMHFCALPSIALLAISIADRNHTATRDGWLQSLVATLLAAA 125 Query: 156 VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGM 215 + L + ++ LP+++++ + W + Q KLA +LQV+S D + Sbjct: 126 LVALLLRPVPDWEASLAVQLSMLPLLLLHSVFSSWSTRQLVRKLARQNVKLQVLSRIDPL 185 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQL 275 T +Y+R +W R + R+ A LLI+DIDHFK IND++GH VGDE + A+ + Sbjct: 186 TTLYSRDYWWQKARAALRDYRQTQASACLLIVDIDHFKRINDSFGHTVGDEVLQAIGLTI 245 Query: 276 QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGV 335 + LR D GR+GGDEFAV+ T + A LR+ L+ LR+ PQ+ + S+GV Sbjct: 246 RHCLRSHDAAGRYGGDEFAVLCMHTQLDDAYAVALRIRNQLSQLRVREHPQLRVSASIGV 305 Query: 336 APLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 A +P ++W+ +AD ALY AK AGR++ AA Sbjct: 306 AAADPSFLSVKDWINAADSALYSAKDAGRDQVIPAA 341 >UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TWE2_ACIAC Length = 377 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 100/341 (29%), Positives = 154/341 (45%), Gaps = 16/341 (4%) Query: 45 RAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKT 104 R A +FL + + W+VLV V+P LA+ A A E+ N+ Sbjct: 32 RTFFYALLFLALGAHFRHTGAGPAVWVVLVVQFLVYPQLAYWTARSAPRQAKAELRNMVV 91 Query: 105 DAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELT-GI 163 D + G+W G++G+ V + + + C+N++ G + + M L L L Sbjct: 92 DNLFGGLWAGLLGMPVWITFTLFIGNCINVVAFHGYPGLLRLVAAMGCGLLGGLVLYGDR 151 Query: 164 TVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRL--------------QVM 209 + + L + + ++ +F SY+ A + + RL Q Sbjct: 152 PLHPDIDTATSLLCILALTLFLTVFAHTSYRRAMEQQKSNDRLREQFEEIRALQDQLQEQ 211 Query: 210 STRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIV 269 + RD +TG+YNRRH + L +E C +L++IDIDHFK INDT GH GD + Sbjct: 212 AVRDPLTGLYNRRHLDATLASEIARCGAQGLPLSLMMIDIDHFKRINDTHGHAAGDAMLQ 271 Query: 270 ALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV-T 328 AL + LQ +R D+ R GG+EF +++ TP A + E L++ + P+V + Sbjct: 272 ALAQLLQRHVRVRDLACRLGGEEFVLLLPETPLAVARERAEALREAFEALQVRHDPEVLS 331 Query: 329 LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 +S GVA SAD ALY AK GRNR V Sbjct: 332 ATLSCGVAAFPQHARQPLALTASADEALYAAKMQGRNRVVV 372 >UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R75_RHOFD Length = 498 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 86/323 (26%), Positives = 156/323 (48%), Gaps = 32/323 (9%) Query: 80 WPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGG 139 +PH+ + A+RA D + E+ NL D+ L G+++ + + S A +M N G Sbjct: 29 YPHVQYWRAARAADSVKTELDNLLIDSFLLGLFMAALEFPLWLSFAAIMATLTNNAANKG 88 Query: 140 PRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKL 199 ++ M+ L+ + + G S ++ + I Y L+ G V +Q +L Sbjct: 89 WPSVPKNVLAMLAGALIWVTVRGFKFSPDTGWPLTIFCMVGICGYVLVIGNVGFQRNLQL 148 Query: 200 AE----------------------------HKRRLQVMSTRDGMTGVYNRRHWETMLRNE 231 +++L+ ++RD +T +YNRR+ +T L E Sbjct: 149 RRVREELRTREQELLKANQSLVVNLQEIEALQQQLREQASRDSLTALYNRRYLDTTLDRE 208 Query: 232 FDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGG 290 +C+R + +L++ID+D FK ND GH GD+ ++A+ + LQ + R SD+ R+GG Sbjct: 209 LASCKREGKPLSLIMIDVDDFKKYNDLHGHQAGDQCLIAVAKTLQASAKRASDLAARYGG 268 Query: 291 DEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN--TPQVTLRISVGVAPL-NPQMSHYRE 347 +EF +++ G A +A + + L++P+ + ++ IS+G+A + N Sbjct: 269 EEFLLVLPGMDATAAQGLAEELRRSVEALKIPHEQSRGGSVTISIGLAVMTNDSHKDVAG 328 Query: 348 WLKSADLALYKAKKAGRNRTEVA 370 L++AD ALY AK GRN+ +A Sbjct: 329 LLRAADEALYHAKHGGRNQVRLA 351 >UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID=A1WD95_ACISJ Length = 382 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 101/385 (26%), Positives = 171/385 (44%), Gaps = 24/385 (6%) Query: 6 MNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPP 65 MN E ++ A L + HQR L A V +G G +A+ +++P Sbjct: 1 MNQEATGRRGLAQRTLDALITTDPHQRIRLAMAG-VSALLMLGCIGAMHLVAAAGLTYPV 59 Query: 66 PGWWWLVLVGWAF--VWPHLAWQIASRAVDP---LSREIYNLKTDAVLAGMWVGVMGVNV 120 P +WW + G V+ + + R DP L + +Y + +A + G+ Sbjct: 60 PVYWWTLACGAGITTVFVLIRSGASRRFADPSLTLFQIVYAIACNAAAYVIAGPARGIAP 119 Query: 121 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPI 180 ++M L + + GLV + V +S +S P LS Sbjct: 120 PILAVIMMFGVFGLTPRQMVGVALYGLVAFGAAGAVVQWWHPAWLSPDSQPP--ALSAAY 177 Query: 181 IVIYPLLFGWVSYQT-------------ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 +V+ ++ ++ T +LA +++ ++ RD +TG+ NRR+ M Sbjct: 178 LVMIAVVLASSTFLTTRVHSARARLRSQQRELAAAVEQIRELAVRDELTGLPNRRYMLEM 237 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGR 287 +R E +R + L +D+DHFK++NDT GH GD A+ + + + +R SD++ R Sbjct: 238 MRLEHARAQRSRQPLLLAQLDLDHFKAVNDTHGHAAGDVALQSFAQTVHGCVRASDLLAR 297 Query: 288 FGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR--LPNTPQVTLRISVGVAPLNPQMSHY 345 +GG+EF ++M+ T + RV + LP Q++L +SVG+A L Sbjct: 298 WGGEEFLLLMANTHPADGTRLLERVRATVAATPVALPGGTQLSLTVSVGLAEL-AHGEST 356 Query: 346 REWLKSADLALYKAKKAGRNRTEVA 370 L+ AD ALY AK+ GRNR +A Sbjct: 357 AALLQRADAALYGAKRLGRNRVLLA 381 >UniRef50_C5T8S9 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8S9_ACIDE Length = 386 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 85/321 (26%), Positives = 147/321 (45%), Gaps = 22/321 (6%) Query: 69 WWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLM 128 W+ ++ V+PH+ + A RA DPL+ EI N+ D G+W +G + +++ Sbjct: 44 AWVPMLAQFVVYPHVVYLRARRAKDPLAAEIQNMLLDNFCFGLWAAALGFPLWIGYMLII 103 Query: 129 IMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLF 188 C+N+ + V L + +T+ +TG + +++ L LS+ + Y +LF Sbjct: 104 CGCINVTAFRAGKGAVQALAAAALGAALTVAVTGWRFTPDTSLLVSALSMGCLTTYLVLF 163 Query: 189 GWVSYQTATKLAEHKRRLQ---------------------VMSTRDGMTGVYNRRHWETM 227 ++ LA + +L+ + RD +TG+YNRR+ T Sbjct: 164 ARGAHTRTVVLANTRAQLRQSQAQLQSQLQAVQSLQAQLTEQANRDPLTGLYNRRYLNTA 223 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGR 287 L E D +L++D+DHFK IND GH GD+ + + L R +D+ R Sbjct: 224 LPRELDASAGAGLPLAVLLMDLDHFKLINDRLGHAAGDDVLCQVAALLLEGTRANDICCR 283 Query: 288 FGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL-PNTPQVTLRISVGVAPLNPQMSHYR 346 +GG+EF +++ G ++A+ + + + + V + +SVGVA Sbjct: 284 YGGEEFLLVLPGMALDAALARAQAFRQKVADRQWCADGQPVAVTLSVGVACTLGAALSPA 343 Query: 347 EWLKSADLALYKAKKAGRNRT 367 + AD ALY+AK GRNR Sbjct: 344 ALIDRADRALYQAKAEGRNRV 364 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 121/231 (52%), Gaps = 13/231 (5%) Query: 146 GLVLMVVSCLVTLELTGITVSFNSAP------LEWWLSLPIIVIYPLLFGWVSYQTATKL 199 L+ + + L G V ++ ++ ++ + + ++ G+ Y L Sbjct: 239 YLITFIPVFNLNNHLMGYLVRYSKDNTYPIILKSFYTNITLSFLLAVILGFSVYIFLKDL 298 Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 + + +S D +TG+YN+ + +L+ E +R+ R +L+I DIDHFK INDT+ Sbjct: 299 ----EKFRYLSETDRLTGLYNKGKFNEVLQREIQRAKRYKRPLSLIIFDIDHFKKINDTY 354 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH VGDE + AL + ++ +R +D R+GG+EF ++ T E A ++ + + T Sbjct: 355 GHKVGDEVLKALAKLIKKNIRKTDFAARWGGEEFVILAPETNVEGAKKLAEKLRQAVETY 414 Query: 320 RLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + P + IS+GVA L P +++ AD+ALYKAK+ GRNR E+A Sbjct: 415 KFPTVG--KVTISLGVAQLEPDEK-PEDFIVRADMALYKAKEGGRNRVEIA 462 >UniRef50_UPI0001AF38B9 GGDEF domain-containing protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF38B9 Length = 249 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 128/235 (54%) Query: 136 GAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQT 195 A GPRL G+ + L++L L V+ + + +P++VIYP++ GW+S+Q Sbjct: 1 AAAGPRLMFQGIFAQALGVLISLALLNPVVNLQGNMAQIYACVPVLVIYPIVIGWLSHQV 60 Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 KL EH+ L+ +S D +TG+ N W+ +L EF + + + +IDIDHFK + Sbjct: 61 TLKLCEHRNILRKLSRTDSLTGLLNHGAWKDLLDLEFTKSQNAYQHCVIALIDIDHFKVV 120 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH +GD + ++ L LR SD+IGR GGDEF VI+ T A + R+ Sbjct: 121 NDTYGHIMGDTVLQNISEALLDNLRDSDLIGRCGGDEFCVILPDTSLIQARETLERMRLA 180 Query: 316 LNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 ++ + + + +S+G+A +MS WL AD ALY AK GRNR A Sbjct: 181 IDKMTHSRHCDLKVSLSIGIAAYMSEMSDAASWLHEADKALYLAKSTGRNRIVSA 235 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 83/278 (29%), Positives = 134/278 (48%), Gaps = 14/278 (5%) Query: 101 NLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL 160 N+ A AG++ V GV ++ + I+ + GG LF L + + L LE+ Sbjct: 109 NMVL-AYYAGVFSVVSGVALVGGSLTGFILFNERVVYGG--LFTGALATLALIILSALEV 165 Query: 161 T--GITVSFNSAPLEW---WLSLPIIVIYPLLFGWVSYQT--ATKLAEHKRRLQVMSTRD 213 + N PL WL L + + P + V+ + + + + ++ +ST D Sbjct: 166 IPYASVIETNGTPLHHNATWLILLLGLSTPYIGLLVAMNSSAIRRWRQRESEVRQLSTTD 225 Query: 214 GMTGVYNRRHWETMLRNEFDNCRRHNRD-ATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 +T V NRRH L E C R +LL++D+DHFKSIND GH GDEA+ Sbjct: 226 PLTQVANRRHLLERLNLEISRCERSGHSELSLLMMDLDHFKSINDEHGHLFGDEALRVTA 285 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL--PNTPQVTLR 330 R L+ R +D++GR+GG+EF +++ T + A+ R + L + + + + Sbjct: 286 RVLREQSRNTDLVGRYGGEEFCLLLPDTGPQGALQIAERCRQALEQADIDREDGEVLHIT 345 Query: 331 ISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 S+G+A ++ L AD ALY+AK+ GRNR Sbjct: 346 TSIGLATYQMGDTN-ESLLHRADEALYQAKEQGRNRIV 382 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 60/179 (33%), Positives = 108/179 (60%), Gaps = 1/179 (0%) Query: 192 SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 +++ T+ E + +L+ ++T D +TG+ NRR + + + RR+ RD +LL++DID+ Sbjct: 591 TFRDVTERKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDLSLLMMDIDY 650 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 FK++ND +GHD GD+ + L++ LR DV GR GG+EF++++ T + A R Sbjct: 651 FKTVNDMYGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGLDGATLVAER 710 Query: 312 VHEGLNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + T ++ + + + +S+GVA + + LK+AD+ LY AK+AGRN+ +V Sbjct: 711 LRAEIETTKMNTRSGSLNITVSIGVATYSEHTKTLEQLLKAADIGLYAAKEAGRNQVKV 769 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 64/180 (35%), Positives = 102/180 (56%), Gaps = 2/180 (1%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 +++ Q T ++ +L M+ DG+TGV+NRR+ +T L+ E + RRH +++++DI Sbjct: 119 YITVQDVTDFVIYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIMMLDI 178 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 DHFK INDT GH GD + ++ L +R SD++GR+GG+EF I+ T E A+ Sbjct: 179 DHFKEINDTHGHICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQALVLA 238 Query: 310 LRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 R + + Q + +S+GV L+ + +K AD ALY+AK+ GRNR Sbjct: 239 ERCRTQVAASQFSCTDHQSRVTVSIGVTDLH-RDDTLDSIIKRADDALYQAKRTGRNRVC 297 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 3/182 (1%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 ++ TK E L ST D +TG+YNRR+ E L +RH+R +L++ Sbjct: 593 VAVFTFVDITKEKELSDMLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMF 652 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DID FK IND++GHDVGD+ + A+ + + +R +D+ R+GG+EF +I T E A Sbjct: 653 DIDFFKHINDSFGHDVGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKI 712 Query: 308 AMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 ++ + L + + S GVA L LK AD ALY+AKK GRN+ Sbjct: 713 LAEKLRSLIRNLHFEEG--INVTCSFGVASLEKH-DTKETLLKRADEALYEAKKTGRNKV 769 Query: 368 EV 369 V Sbjct: 770 VV 771 >UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKN6_DESMR Length = 629 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 90/336 (26%), Positives = 157/336 (46%), Gaps = 26/336 (7%) Query: 61 VSHPPPGWWWLV-LVGWAFV------WPH------LAWQIASRA----VDPLSREIYNLK 103 +++P W + L G+A + W + + ++A+R + +R ++ + Sbjct: 280 LTNPYHVLQWALKLTGFALLIFGIIFWKNRNLKREVEEKVAARELLKQANNYNRSLFEIN 339 Query: 104 TDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFV------AGLVLMVV-SCLV 156 TD ++A GV+ + + + L+G LF GL ++ S + Sbjct: 340 TDPIMAIDREGVITDANKSTETITGLSRTELIGRKFSSLFTNDQKADQGLQDTLLYSSIK 399 Query: 157 TLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMT 216 EL ++ + + S+ + + + T+ + RL+ M+T D +T Sbjct: 400 NHELEFTNINGKNTHAIFNFSVFKDETGISTGIFAAARDITERKIMEERLKEMATTDSLT 459 Query: 217 GVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ 276 G+ NR+H+ F+ +RH + ++ + DIDHFK +NDTWGH+ GD + L++ Sbjct: 460 GLNNRQHFLEHSSILFEMAKRHKANLSIALFDIDHFKQVNDTWGHEAGDLVLRELSKLAL 519 Query: 277 ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGV 335 R SD+IGR GG+EFAVIM T E AI A R + + + R +++ +S+G+ Sbjct: 520 NCFRSSDIIGRIGGEEFAVIMPETDKEEAILASERFRKIVESTRFEYENDLLSITVSIGI 579 Query: 336 APLNPQM-SHYREWLKSADLALYKAKKAGRNRTEVA 370 A NP + + K +D ALY AK GRN A Sbjct: 580 AQFNPNTNTTINDLTKISDDALYTAKANGRNMVFCA 615 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 101/183 (55%), Gaps = 1/183 (0%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 + + + T+ + RL ++T D +TG++NRR + + EF +R+ T+L++ Sbjct: 868 YAVATIRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMM 927 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DIDHFK +NDT GH VGDE + L R + LR D++GR GG+EF V++ T A A+ Sbjct: 928 DIDHFKRVNDTHGHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAME 987 Query: 308 AMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R+ + + + + + +S+G A N LK AD+ALY+AK++GRN+ Sbjct: 988 VAQRLRRAIEKASMATDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNK 1047 Query: 367 TEV 369 Sbjct: 1048 VVA 1050 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 2/179 (1%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 T+ E + RL+ ++T DG+TG+ NRR + L +E RR+ L+ ID+D F Sbjct: 533 ITDTTEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDRF 592 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 K +NDTWGH VGDE + AL + +R D +GR GG+EFAV++ T E A+ R+ Sbjct: 593 KRVNDTWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAERL 652 Query: 313 HEGLNTLR-LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 G+ L +T+ +S+GV+ P L+ AD ALY+AK GRNR E A Sbjct: 653 RAGVEAAPLLTTAGPLTVTLSLGVSASPP-CDGADTLLREADRALYRAKAGGRNRVERA 710 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 60/179 (33%), Positives = 100/179 (55%), Gaps = 3/179 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + + +E +R+L+ + D +TG+YNRR ++ ++ + +L+++D+DHFK Sbjct: 140 RVIIEGSERQRKLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFK 199 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 NDT GH GDEA++AL + + LR D+ R+GG+EFAV++ T A S R+ Sbjct: 200 RYNDTHGHQGGDEALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLR 259 Query: 314 EGLNTLRLPNTPQVT---LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + L + + + + IS+GVA + + E + +AD ALY+AK GRNR V Sbjct: 260 TAVEALEIKDDEGNSLSGITISLGVAQTSGTVDSVSELIATADAALYQAKNQGRNRVVV 318 >UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain protein) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9W6_SHEAM Length = 557 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 147/294 (50%), Gaps = 11/294 (3%) Query: 81 PHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGP 140 PHL++ + AV ++ + + TD G+ V + L+ + L G Sbjct: 271 PHLSYIVLGLAVLMMTVQGVAMTTDDRELGLIFAFDFVYIFTLLMPLLGILAWLHGLPTA 330 Query: 141 RLFV-AGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKL 199 RLF+ A L MV SC L + G + S + + I + + ++ + Sbjct: 331 RLFLLASLSTMVGSCTTGLAVEG----YISFNQWTYRAAEIGMFIDAMLLALALAAQFRQ 386 Query: 200 AEHKRRL-QVMSTRDGMTGVYNRRHWETMLRNEFDN-CRRHNRDATLLIIDIDHFKSIND 257 +E +R L Q ++ D +TG+ NRR + L+ + +R R L++IDID FKSIND Sbjct: 387 SEQERVLAQQLAATDPLTGIANRRAFSEQLQRLWHLDSQRRCR--ALIMIDIDRFKSIND 444 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 T GH+VGD+ + + R ++ ++R D GR+GG+EF V+++ E A R+ + Sbjct: 445 TLGHEVGDKVLTDIARVIRYSIRNRDQCGRWGGEEFVVLLASASEEEAGIIAERIRHNIE 504 Query: 318 TLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 +L P ++ + SVGV L+ S + + L+ AD A+Y AK AG NR ++A Sbjct: 505 SLSFPAPANKLKVTASVGVC-LDEGHSRHEDILRRADEAMYHAKDAGGNRVKLA 557 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 119/203 (58%), Gaps = 5/203 (2%) Query: 172 LEWWLSLPIIVIYPLLFGWVSYQTATK---LAEHKRRLQVMSTRDGMTGVYNRRHWETML 228 + + L L ++ +++ Q A +AE + L+ ++ +D +T + NRR ++ L Sbjct: 798 IIFALGLAATILVRARIRFLNNQRAQLELMVAEKTKELKGLARQDSLTQLGNRRAFDEQL 857 Query: 229 RNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRF 288 + EF C R + +L IID+DHFKSIND + H +GD+ ++ L+ L LR D I R+ Sbjct: 858 QYEFKRCERSEQPLSLAIIDVDHFKSINDRFLHVIGDQVLIELSALLSNMLRDIDYIARW 917 Query: 289 GGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN-TPQVTLRISVGVAPLNPQMSHYRE 347 GG+EFA++M T A+ A+ A R+ + + + ++ + +S+GVA + ++ Sbjct: 918 GGEEFALLMPETTAKEALQAAERIRQRIEDTSYQHLADELAVTVSIGVAS-SEHYPNHSA 976 Query: 348 WLKSADLALYKAKKAGRNRTEVA 370 L +AD ALYKAK++GRNRTE+A Sbjct: 977 LLVAADKALYKAKQSGRNRTELA 999 >UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammaproteobacteria RepID=B3PIC1_CELJU Length = 322 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 114/189 (60%), Gaps = 3/189 (1%) Query: 186 LLFGWVSYQTATKLAEH--KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDAT 243 ++ V+ K+A+ ++LQ +S D +T ++NR +WE L EF R+ ++ Sbjct: 133 VIIYDVTDTAVNKIAQQHANKQLQNLSRTDHLTSLFNRGYWELRLIQEFKRYDRYESPSS 192 Query: 244 LLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAE 303 L+++DIDHFK IND +GH VGDEAI ++R ++ +R D+ GR+GG+EF +I++ T + Sbjct: 193 LIMLDIDHFKKINDNYGHTVGDEAIRCVSRVIKEQVRDLDIAGRYGGEEFGIILTSTNGD 252 Query: 304 SAITAMLRVHEGLN-TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 A R+ + ++ IS+GVA LN M +R+W++ AD ALYK+K++ Sbjct: 253 GACVIAERLRSIIEKQTVYAEGHEIHFTISLGVAELNDHMHDHRQWIEKADHALYKSKES 312 Query: 363 GRNRTEVAA 371 GRNR ++A Sbjct: 313 GRNRCTLSA 321 >UniRef50_UPI0001C3940A response regulator receiver modulated diguanylate cyclase n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3940A Length = 392 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 5/223 (2%) Query: 153 SCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTR 212 + EL V L ++ + V ++ L + + LQ ++ Sbjct: 142 GTMFWNELFISPVRNEQGELTNFIGIQTDVTERKKSEEALERSRIALKKTNQELQRLALY 201 Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 D +T V NRR + L + C R L++ D+D+FK NDT+GH GD+ + + Sbjct: 202 DDLTQVANRRRFNEYLAYNWHRCSREQEPIALILCDVDYFKPYNDTFGHQAGDDCLHKIA 261 Query: 273 RQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT--- 328 R + + R D++ R+GG+EFA+I+ TP A+ R+ + + LR+P+ + Sbjct: 262 RAISGAIQRSVDLVARYGGEEFAIILPNTPINGAVKVAERIRKQVENLRVPHPGSQSSDY 321 Query: 329 LRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTEVA 370 + +S+GVA P + AD ALY+AK GRN T +A Sbjct: 322 VTVSLGVACKIPHSELSVDSLIAQADEALYQAKNQGRNCTVIA 364 >UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087A8_SHEFN Length = 321 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 3/221 (1%) Query: 151 VVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQT-ATKLAEHKRRLQVM 209 V++ L I + S + + P+ L G + T T + +L+ + Sbjct: 103 VLNSQSKLSDDIIVDTPASLIVYHEVKQPLYNHKGTLIGLIGISTDITAAYHLRSKLERL 162 Query: 210 STRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIV 269 + D +TG++NRR + + +EF R+ + +L+IIDID FK +NDT+GH VGDE I Sbjct: 163 ANTDPLTGLFNRRSFTSFCEHEFFRATRYFQPFSLMIIDIDLFKKVNDTYGHLVGDEVIK 222 Query: 270 ALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTL 329 + +R +DV+ R GG+EFA+++ T +SA R+ E TP ++ Sbjct: 223 RVANICNEHVREADVLARIGGEEFAILLPDTDIDSAYVLAERLREAQQQYEEQKTP--SI 280 Query: 330 RISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 IS+GVA L Q + E K AD ALY +K GRN VA Sbjct: 281 TISIGVATLRSQDKAFLEIFKRADKALYSSKNVGRNSVNVA 321 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 2/200 (1%) Query: 170 APLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLR 229 L+ +I Y L ++A + E ++ +T D +TG+YNRR + + Sbjct: 93 DGLDLGAVDYVIKPYSLSVLLARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQ 152 Query: 230 NEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFG 289 E + +R+ DA+ +I+DIDHFK +ND +GH VGD+ + L + + T R D+ RFG Sbjct: 153 RELERVQRNETDASFIILDIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKVDLCCRFG 212 Query: 290 GDEFAVIMSGTPAESAITAMLRVHEGLNTLRL-PNTPQVTLRISVGVAPLNPQMSHYREW 348 G+EF + + T E A+ R + + L + + IS+GV+ N + + + Sbjct: 213 GEEFVICLPDTDTEGALLVAERTRKKVEELSFNTEKGPLHVTISLGVSSAN-ENTTLEDM 271 Query: 349 LKSADLALYKAKKAGRNRTE 368 LK AD ALY+AK+ GRNRTE Sbjct: 272 LKRADDALYQAKQNGRNRTE 291 >UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W79_COLP3 Length = 334 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 66/177 (37%), Positives = 104/177 (58%), Gaps = 1/177 (0%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 +L + + +S DG+T VYNRRHW+ L E+ RRH++ +L+++D+DHFK + Sbjct: 154 QMQLQKTLAEIAQISRIDGLTQVYNRRHWQDSLEQEYAKARRHDKKLSLIMLDLDHFKLL 213 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 ND +GH GD ++ ++ + LR D GR+GG+EFA+I+ T + AI R+ Sbjct: 214 NDNYGHQGGDMVLIEVSALISTLLRVEDTFGRYGGEEFAIILPETDSAGAIELAQRICRI 273 Query: 316 LNTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + T Q + + +S+GVA L+ + S+Y E + AD ALY+AK GRN+ AA Sbjct: 274 IATTPFTYNDQVIKVTVSLGVAQLSSKESNYEELITQADSALYQAKSQGRNQVCNAA 330 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 68/177 (38%), Positives = 107/177 (60%), Gaps = 2/177 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T+ E + +L+ M+T D MT + NRR++ ++++E + R++R +L++ D+D FK+ Sbjct: 656 DVTESREKENQLRRMATTDDMTKLNNRRYFIELVKSEIERSIRYSRPLSLVMFDVDKFKA 715 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 +NDT+GHDVGD + A+ + LR D+IGR GG+EFAV + T + A+ R+ Sbjct: 716 VNDTYGHDVGDMVLKAIAATAKGVLRDVDIIGRLGGEEFAVGLPETDLKGAMLLAERLRV 775 Query: 315 GLNT--LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 L + LP+ V +S+GVA L+ ++ LK ADLALY AK+ GRNR E Sbjct: 776 VLEEASVELPDGGIVDFTVSLGVAVLDRSITDVDVLLKHADLALYAAKENGRNRVEA 832 >UniRef50_Q2BMK3 Serine/threonine kinase with two-component sensor domain n=3 Tax=Bacteria RepID=Q2BMK3_9GAMM Length = 1723 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 64/185 (34%), Positives = 110/185 (59%), Gaps = 5/185 (2%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 V+ +TA +L E L+ + DG+TG+ NRR ++T L + RR ++++ D+D Sbjct: 1534 VAERTA-QLEELNEELKKLVDSDGLTGLANRRCFDTYLARTWLRLRREQNPLSIVMFDVD 1592 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 +FK+ NDT+GH GD+ +V L + ++ + R +D++ R+GG+EF V++ T E A+ Sbjct: 1593 YFKTFNDTYGHQSGDDCLVMLAKTVREQIQRPADLVARYGGEEFIVVLPDTDEEGAMAVA 1652 Query: 310 LRVHEGLNTLRLPNTPQV---TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 ++ + +L++P+ V + ISVGVA P ++ AD ALY+AKK GRN+ Sbjct: 1653 GQICVAVASLKIPHCNSVVADHVTISVGVATTCPDTQGPDSLIELADQALYEAKKQGRNQ 1712 Query: 367 TEVAA 371 ++AA Sbjct: 1713 VKLAA 1717 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 2/183 (1%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 + T+ + + L+ + D +TGV NRR++ E R++ + ++DI Sbjct: 407 IGTSTDITERKQLEEELKRQARIDFLTGVSNRRYFMEQAEQEIQRTSRYDTPLSFFMLDI 466 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 D FK +NDT+GH GD + + + TLR D+IGR GG+EFA+++ T A Sbjct: 467 DLFKQVNDTYGHKSGDIVLKRMASVCRETLREIDIIGRVGGEEFAILLPETDKAQAAEVA 526 Query: 310 LRVHEGLNTLRLPN--TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 R+ L ++P + +S+GVA + L AD ALY+AKK GRNR Sbjct: 527 ERLRSVLADEKVPTEAGAPIQFTVSIGVASRVSSQDNIDMLLNLADEALYQAKKYGRNRV 586 Query: 368 EVA 370 +A Sbjct: 587 YIA 589 >UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489Q4_COLP3 Length = 451 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 64/186 (34%), Positives = 107/186 (57%), Gaps = 4/186 (2%) Query: 185 PLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 P L G+ + T+L + K ++++ D +T +YNRR + E+ +R++ TL Sbjct: 266 PALIGFST--DVTELFKLKEEFKLLANTDPLTNLYNRRFFIEQAEKEYQRAKRYSLSMTL 323 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 + IDIDHFKSIND +GH GD+ ++ + +QL+ +LR +D++ R GG+EF++++ T A S Sbjct: 324 ISIDIDHFKSINDQFGHPAGDQVLIEIAKQLKASLRQTDILARIGGEEFSILLPETSAMS 383 Query: 305 AITAMLRVHEGLNTLRLPNT--PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 A+T R+ E + L + ++ L +S+GV+ L + AD ALY+AK Sbjct: 384 AMTFAERIKEEQSRLIITGDWQGEINLSVSIGVSSLIASDKAFDVLFSRADKALYQAKNT 443 Query: 363 GRNRTE 368 GRN Sbjct: 444 GRNTVC 449 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 2/185 (1%) Query: 184 YPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDAT 243 Y + V T+ +K +L+ + D +TGVYNR ++ L E +R+ + Sbjct: 431 YGDQYVSVLMTDITEEEHYKSQLEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQSPFS 490 Query: 244 LLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAE 303 + +DIDHFK INDT+GHDVGD +V+L + + LR +DV R GG+EF ++M T E Sbjct: 491 MAFMDIDHFKMINDTYGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPETSLE 550 Query: 304 SAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAG 363 +A+ R+ + + + P+ + IS+G+ LN + + + K AD ALYKAK+ G Sbjct: 551 NALIISERIRSTVEGISSKDVPE-KITISMGLVELN-SWDNVQSFYKRADEALYKAKENG 608 Query: 364 RNRTE 368 RNR E Sbjct: 609 RNRIE 613 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 3/179 (1%) Query: 192 SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 ++ T+ + + +L +S D +T YNRR++ ML E + +R L+++DIDH Sbjct: 487 TFIDLTERKKLEEQLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIMLDIDH 546 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 FK++ND +GH GD + L ++ +R +D + R+GG+EF +++ TP E A Sbjct: 547 FKNVNDRFGHAAGDLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAAGLAEE 606 Query: 312 VHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + E L+ L +P + S GV P L AD LY AK +GRN + Sbjct: 607 LREQLSMLEIPGVG--RVTASFGVTGYCP-GDTLDTLLMRADQMLYTAKASGRNCVRFS 662 >UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0SXM5_ACILW Length = 440 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 133/277 (48%), Gaps = 16/277 (5%) Query: 106 AVLAGMWVGVMGVNVLPSTAM------LMIMCLNLMGAGGPRLF-----VAGLVLMVVSC 154 V A W+G++ +++ P A + I+ NL ++ + L +M+ Sbjct: 135 TVAAAAWIGLLALSISPHVATYIYASAIFILIANLCVQTQFKVAVYCSILIALFIMLGVS 194 Query: 155 LVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDG 214 S +PL W+ S+ I +L S+ + + + L+ ++ D Sbjct: 195 QFMSASQAFIFSVVFSPL-WFFSIYIN-WNNILNVRRSFLRSLLDEWNYQTLKNLAHTDD 252 Query: 215 MTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQ 274 +T +YNRRH+ M +H LL+ D+DHFK+IND++GHDVGD + + Sbjct: 253 LTQLYNRRHFVDMAERSIHQWPKHASS-CLLMFDVDHFKNINDSYGHDVGDRVLQLIAEV 311 Query: 275 LQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT--LRLPNTPQVTLRIS 332 + +R SDV+ RFGG+EF ++ T + ++ R+ + + + + IS Sbjct: 312 TRKEMRHSDVLARFGGEEFIALLEDTQLQDSLVIAERIRCAIQKQYIYVEPNHTIRFTIS 371 Query: 333 VGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 +GVA L + +K AD+ALY+AKK+GRNR EV Sbjct: 372 IGVAELESHTQPLEDLIKQADIALYQAKKSGRNRIEV 408 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 95/343 (27%), Positives = 149/343 (43%), Gaps = 24/343 (6%) Query: 32 RSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRA 91 R G R + + +GL FL S+ W L AF P +AW I Sbjct: 231 RWGYRILQALLAVNLLGLIYGFLG------SYQVGIIWISSLA--AFATP-VAWLIG--- 278 Query: 92 VDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMV 151 ++ R +L G +V +L + + + + L V + Sbjct: 279 INVWRR-------GQILGGFYVLAWTPLLLGHLVLAVSKLGWIPRSPFTELAPQAGVAVE 331 Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMST 211 V L I + +L I L + +L + +L+ +S Sbjct: 332 VILLSFALAYRINMERRRRQQAQEHALDIQRQANLTLESRVRERTEELEQANEQLRAISL 391 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 DG+T V NRR ++ L E++ RH + +L+++DIDHFK +ND +GH VGD+ +VAL Sbjct: 392 TDGLTHVANRRRFDEKLETEWNRALRHEHELSLILLDIDHFKQVNDRFGHLVGDDCLVAL 451 Query: 272 TRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL---PNTPQV 327 L + R D++ R+GG+EFA+++ T A R+ + + + V Sbjct: 452 ASILSDEVQRSGDLVARYGGEEFAILLPTTDVAGAQQVAERMRLSVARTPVNSGEHMSPV 511 Query: 328 TLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTEV 369 +L IS+GVA L P S +E ++ AD ALY AK GRNR V Sbjct: 512 SLTISLGVATLTPNRQSDCQELIRRADEALYAAKSDGRNRVVV 554 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 1/180 (0%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 + Y T + + L+ ++T DGMTG++NRRH+ T+ E+ RR+ R + L+IDID Sbjct: 146 LIYSDVTDIVRNAEELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMIDID 205 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFKSIND +GH VGD+ IV L + + R DV+ R GG+EFA+++ T A+ Sbjct: 206 HFKSINDDFGHQVGDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAVAE 265 Query: 311 RVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 R+ + L + V +S+G A + + +++AD ALY+AK GRNR Sbjct: 266 RLRGEVAASSLLMASGSVRATVSIGAATSAATIDGISDLMRAADRALYEAKHGGRNRVVC 325 >UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Phytochrome (GAF) sensor n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YS99_9CYAN Length = 628 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 108/203 (53%), Gaps = 5/203 (2%) Query: 174 WWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFD 233 W + L + P+ + +L + L+ M+ DG+T V NRR ++ +L E++ Sbjct: 425 WEVHLLEQLTTPIAVAIQQAELYEQLKIANQELEKMAMTDGLTLVANRRFFDKILSQEWN 484 Query: 234 NCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDE 292 RR +L+I DID+FK NDT+GH GD + + + LQ + R D++ R+GG+E Sbjct: 485 RLRREIGTLSLIICDIDYFKRYNDTYGHLAGDSCLKKVAQVLQEEVKRSGDLVARYGGEE 544 Query: 293 FAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV---TLRISVGVAPLNPQMS-HYREW 348 FA+++ T E AI + + L++ + + + ISVGVA P+ + Sbjct: 545 FAILLPKTDLEGAILVSEVICSKVRALQITHEKSLVAPYVTISVGVASTIPEPPLIPKTL 604 Query: 349 LKSADLALYKAKKAGRNRTEVAA 371 + AD ALY+AKK GRNR VAA Sbjct: 605 ILRADQALYEAKKNGRNRVFVAA 627 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 2/183 (1%) Query: 185 PLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 + ++ Q T+LA ++++L M+T D +TGVYNRR E+ L+ E D R++R +L Sbjct: 116 AITSLFLIVQDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPFSL 175 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 ++IDID FK +NDT GH GD + + +R SD + R+GG+EF ++ T ++ Sbjct: 176 MMIDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDCDA 235 Query: 305 AITAMLRVHEGLNTL-RLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAG 363 A T + + + L + + IS+G+A P +K AD ALY+AK++G Sbjct: 236 AETVAEHLRAHIENMEHLFQKKVIRVTISLGIACFAPD-DSPETLVKRADEALYQAKRSG 294 Query: 364 RNR 366 RNR Sbjct: 295 RNR 297 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 61/178 (34%), Positives = 90/178 (50%), Gaps = 3/178 (1%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 V + T+ + L+ S RD +T +YNRR +L E RRH TL+++DID Sbjct: 314 VEFADITERTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDID 373 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFK INDT+GHD GD + + + LR +D++ R+GG+EF + T + A Sbjct: 374 HFKRINDTFGHDSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAE 433 Query: 311 RVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 ++ + P + ISVG++ L +K AD ALY AK+ GRNR Sbjct: 434 KIRSSIAMFSFPTVGA--VTISVGISLL-ESKDDINALIKRADTALYAAKEMGRNRVV 488 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 4/185 (2%) Query: 191 VSYQTATKLAEHKRR--LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ A LA K R L S RD +TG++NRR+ E L E +RH R ++++D Sbjct: 1156 VAEHLALSLANLKLRETLSQQSIRDALTGLFNRRYMEESLEREIHRAQRHQRPMGIIMLD 1215 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 IDHFK NDT+GH+ GD + L LQ ++R SD+ R+GG+E +I+ Sbjct: 1216 IDHFKHFNDTFGHEAGDAVLRELGIFLQRSIRASDIACRYGGEELMLILPDASLADTKQR 1275 Query: 309 MLRVHEGLNTLRLPNTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 ++ + L++ ++ + ISVGVA S +E + +AD ALY+AK GR+R Sbjct: 1276 AEQIRHDVKGLQIEYHHKLLDAIAISVGVAAFAEHGSTAQELIAAADRALYQAKAQGRDR 1335 Query: 367 TEVAA 371 A+ Sbjct: 1336 VVTAS 1340 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 71/177 (40%), Positives = 101/177 (57%), Gaps = 3/177 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L E +RL+ + D +T V+NR H E L E C+RH RD ++++DIDHFK Sbjct: 513 QLNQELTEANQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRHGRDLAVILLDIDHFK 572 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +ND +GHDVGD+ + ++ + LR SDV GR+GG+EF +I T ESA R+ Sbjct: 573 RVNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEEFLIIAPETDLESANQLAERLR 632 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L+ L+ Q + S GVA L P +K AD ALY+ K++GRN EV+ Sbjct: 633 RRLSNLQFDKVGQ--VTASFGVAELLPSEDR-NSLVKRADNALYQVKESGRNSVEVS 686 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 100/192 (52%), Gaps = 2/192 (1%) Query: 179 PIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRH 238 P+ + S Q T+ + L+ ++T D +TG+YNRRH+ +L E + +R+ Sbjct: 385 PVYEEERITSIVGSAQDITERKRAEEHLRYLATTDELTGLYNRRHFMEILDTEIERAKRY 444 Query: 239 NRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMS 298 + L+ +DIDHFK+INDT GH VGD A+ L QL R D +GR GG+EFA+I Sbjct: 445 EQSLALISLDIDHFKTINDTHGHAVGDAALEHLAAQLLACKRQPDSLGRLGGEEFALIAP 504 Query: 299 GTPAESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLN-PQMSHYREWLKSADLAL 356 T A R+ L + + + IS+GV LN LK AD AL Sbjct: 505 HTDRAGATELAERIRSELERTPIELESTSLHPTISLGVTALNIQDNDTIDALLKRADDAL 564 Query: 357 YKAKKAGRNRTE 368 Y+AK+ GRNRT Sbjct: 565 YEAKRTGRNRTV 576 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 256 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 4/184 (2%) Query: 191 VSYQTATKLAEHKRR--LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ Q A +A R LQ S RD +TG+YNRR+ E +L E +R ++++ID Sbjct: 1429 VAEQVALAIANLNLRETLQYQSIRDPLTGLYNRRYLEEVLTQEIARGQRRQHPISVVMID 1488 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 +D+FK NDT+GHDVGD + + L+ T+RGSD+ R+GG+E +I+ + E Sbjct: 1489 VDYFKRFNDTYGHDVGDYVLQTIGAMLKETVRGSDIACRYGGEEMTLILPESSLEETTIK 1548 Query: 309 MLRVHEGLNTLRLPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + E + L L Q L IS+G+A + +++AD ALY+AK AGRN+ Sbjct: 1549 AEEIREAIAQLTLAYNGQHLGKLTISLGIAGFPKHGTTGIALIQAADAALYRAKAAGRNQ 1608 Query: 367 TEVA 370 VA Sbjct: 1609 VVVA 1612 >UniRef50_A4BIU7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BIU7_9GAMM Length = 318 Score = 256 bits (656), Expect = 8e-67, Method: Composition-based stats. Identities = 69/174 (39%), Positives = 111/174 (63%), Gaps = 1/174 (0%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L RL +S DG+T +YNR +WE ML NEF +RH D +L++ DIDHFK +ND Sbjct: 144 ELKAANDRLAQLSRTDGLTQLYNRAYWEEMLSNEFKRQKRHAHDLSLIMFDIDHFKKVND 203 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 T+GH VGD+ I A+ +++ R +D+ GR+GG+EFA+++ + AE+A+ R+ + + Sbjct: 204 TYGHQVGDDVIRAVAEEVRHNSRNTDIAGRYGGEEFALLLIDSDAENALLFAERLRKAIE 263 Query: 318 TLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 R+ ++ + +S+GVAP HY W+++AD ALY +K GRNR+ ++ Sbjct: 264 NRRVSTPEGELQVTVSLGVAPWKESFHHYNAWIEAADKALYTSKDEGRNRSTLS 317 >UniRef50_Q0F307 Sensory transduction system regulatory protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F307_9PROT Length = 432 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 132/252 (52%), Gaps = 12/252 (4%) Query: 131 CLNLMGAGGPRL--FVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLF 188 CL G G ++ F GL + V ++ +TV + WL ++Y Sbjct: 181 CLKCHGNQGYQVGDFSGGLDVAVPMATYLKHVSDVTVLLWKSYGLIWLVGLSGIVYAFRH 240 Query: 189 --GWVSYQT--ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHN-RDAT 243 VS + ++L E +L+ S +DG+T V NRR ++T+L E+ RR R Sbjct: 241 NRAIVSERLKLISELQEMNDKLERYSYQDGLTRVANRRMFDTLLDREWAAARRGGGRQLA 300 Query: 244 LLIIDIDHFKSINDTWGHDVGDEAIVALTRQL-QITLRGSDVIGRFGGDEFAVIMSGTPA 302 L++IDID+FK NDT+GH GD+ + + L +++ R +D+I R+GG+EF +++ T Sbjct: 301 LVMIDIDYFKLYNDTYGHLAGDDCLKRIAAALSRVSKRTTDLIARYGGEEFVLLLPNTGR 360 Query: 303 ESAITAMLRVHEGLNTLRLPNTPQ---VTLRISVGVAPLNPQMS-HYREWLKSADLALYK 358 E A + + + L++P++ + ISVGV + P + ++ AD ALY+ Sbjct: 361 EQAHSLAEQCLRDIAALQIPHSQSEAAEVVTISVGVTTMAPDATMQAAMLIEMADRALYR 420 Query: 359 AKKAGRNRTEVA 370 AK++GRNR EVA Sbjct: 421 AKESGRNRVEVA 432 >UniRef50_B8FCK6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCK6_DESAA Length = 301 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 9/291 (3%) Query: 84 AWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLF 143 + IA A + L+ + + V + L++ ++ Sbjct: 10 SRLIAHVAKNMLTARGHEVTVATNGEEGLEAVATIKPDLILLDLIMPGMDGYAVCEKIKG 69 Query: 144 VAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATK----- 198 + V L + T V A +++ P L V+ K Sbjct: 70 SPATADIPVIMLTSKAETADKVRGLEAGASDYVTKPFE--EGELVARVNTHLRIKELYES 127 Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L E R+LQ ++ RDG+TG+YN R+++ + +F R++ + ++ DID FK NDT Sbjct: 128 LQETNRQLQELANRDGLTGLYNHRYFQDAMTKDFQRAMRYHESLSCVLCDIDFFKKFNDT 187 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 +GH GD + L R ++ +LR +D+ R+GG+EFA+++ TPA +A R+ E + Sbjct: 188 YGHQTGDIVLSTLARIVEDSLRDTDLAARYGGEEFALVLYHTPAAAAFMVAERLRESVEQ 247 Query: 319 LRL-PNTPQVTLRISVGVAPLN-PQMSHYREWLKSADLALYKAKKAGRNRT 367 N +++ ISVGVA P + ++ ++ AD ALYKAK+ GRN+ Sbjct: 248 HEFIANDLSLSVTISVGVATYPHPDIPDHKTLIECADKALYKAKENGRNQV 298 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 65/177 (36%), Positives = 95/177 (53%), Gaps = 1/177 (0%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 T +++ L+ +S D +TG++NRRH+ T++ EF RR + TL ++DIDHF Sbjct: 361 VNDITHQQQYQEHLKRLSRTDELTGLFNRRHFITLMHKEFSRARRTHERLTLAMLDIDHF 420 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 K +ND +GHDVGD + L R L+ +R D+ R+GG+EFA+ T A R+ Sbjct: 421 KDVNDKYGHDVGDHVLQHLGRILREDVRPYDIAARYGGEEFAICFPDTDLSQADHICERL 480 Query: 313 HEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + N + +S G++ L P+ LKSAD ALY AK GRNR E Sbjct: 481 RTLCAASEVSRNGGTIGFTVSFGLSELRPEHEDLDGLLKSADNALYAAKANGRNRIE 537 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 1/176 (0%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T+ + L+ ++T D +TG++NRRH+ M R E D RRH R L++DIDHFK Sbjct: 402 DITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLDIDHFKR 461 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 INDT GH VGD AI AL +R DV+GR GG+EFA++++ T + A+ R+ + Sbjct: 462 INDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALLVAERLRQ 521 Query: 315 GLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + +R+P V S+GVA + L AD+ALY AK++GRN+ V Sbjct: 522 AVAAIRIPAELGTVAFTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRNKVAV 577 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 74/275 (26%), Positives = 140/275 (50%), Gaps = 21/275 (7%) Query: 107 VLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAG----------LVLMVVSCLV 156 +L GM + + G+ + A I + F+ G L++++V V Sbjct: 80 ILIGMIILLTGIIIHGGIANTAIY--WIYTYPLLSFFLKGNRVGLFWNITLIVVIVILAV 137 Query: 157 TLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMT 216 +L + + ++ + LS ++++ ++Y + L +++ ++T D +T Sbjct: 138 LNKLNIVPIPYSPDEIRQALSAYVVIM------VLAYVFESALLSSYEKIKKLATTDPLT 191 Query: 217 GVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ 276 G +NR L E + +R+ +L++ DID+FKSINDT+GH++GD+ + ++ Sbjct: 192 GAFNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHNIGDQVLKITIDTIK 251 Query: 277 ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVA 336 +R +D +GRFGG+EF +I G E A ++ + + +++ P++ ISVGVA Sbjct: 252 NHIRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKDIKVEGIPEI--TISVGVA 309 Query: 337 PLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 P +++K AD+ALY AKK G+NR E+ + Sbjct: 310 EYFPD-ESITDFIKKADIALYSAKKKGKNRVEIYS 343 >UniRef50_Q2BP76 GGDEF domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP76_9GAMM Length = 322 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 71/186 (38%), Positives = 114/186 (61%), Gaps = 4/186 (2%) Query: 181 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR 240 I+IY + S +L + ++LQ +S D +TG++NR +WE L NEF+ R Sbjct: 131 ILIYDVTDNVTS---QLELQQANKKLQALSREDRLTGLFNRGYWEECLNNEFERFNRSQM 187 Query: 241 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT 300 +TL++ DIDHFK +NDT+GH GDE I + L+ R +D++GR+GG+E+ I++GT Sbjct: 188 TSTLVMFDIDHFKRVNDTYGHQAGDEVIRVVADTLREQARKTDILGRYGGEEYGAILTGT 247 Query: 301 PAESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKA 359 E+A+ R+ + +L +P Q+ IS+GV+ L + +EWL+ +D ALYK+ Sbjct: 248 NGENAMIFAERLRARIESLVVPYGEHQLKFTISIGVSELTYEHDSPKEWLEQSDQALYKS 307 Query: 360 KKAGRN 365 K++GRN Sbjct: 308 KQSGRN 313 >UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VQQ9_PSEU5 Length = 466 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 7/234 (2%) Query: 140 PRLFVAGLVLMVV----SCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQT 195 RL G+V++V+ + + ++ ++ + LS+ ++I+ L +Q+ Sbjct: 234 RRLIDQGVVVVVLLWPTDFMAAFQERKTLLTVSAGVISLALSVVALLIF--LLSSRYFQS 291 Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 +L +L ++ D +TGV +RR + L E RRHN +LL++DIDHFK + Sbjct: 292 IARLRLAHGQLAQLANTDVLTGVSSRRAFLAGLEAELARARRHNESLSLLMLDIDHFKRV 351 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 ND GH +GD + + LR D++GR GG+EFA+++ T AE A ++ Sbjct: 352 NDVHGHPIGDAVLKQFSETCAGMLRAHDLLGRLGGEEFAIVLPHTDAEGARCVAEKIRTA 411 Query: 316 LNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + +P +T+ +S+G+A + + + AD ALY+AK+ GRN+ Sbjct: 412 VAQTPMPTAAGDITVTVSIGLAQMEGLPGEVDQLMARADQALYEAKRGGRNQVR 465 >UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VMP7_9CYAN Length = 505 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 127/259 (49%), Gaps = 10/259 (3%) Query: 119 NVLPSTAMLMIMCLNLMGAGGPRLFV---AGLVLMVVSCLVTLELTGITVSFNSAPLEWW 175 + C L GG L + G+ ++ ++ + + S P Sbjct: 235 PEWITEISAESACCCLCAEGGLNLDLNTGVGVPILFRDRVLAILVFFKQARSESEPRLID 294 Query: 176 LSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNC 235 I L + +TA L E ++L+ + T DG+TG+ NRR ++ + E+ Sbjct: 295 FIQLIAAQLGTLMQRIKVETA--LFEANQKLKYLVTIDGLTGIANRRKFDQYIHREWQRL 352 Query: 236 RRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFA 294 R +L++ DID FK NDT+GH GD+ + + ++++ + R +D++ R+GG+EFA Sbjct: 353 FREQLPLSLILGDIDFFKRYNDTYGHQAGDDCLRNVATKIRLLVKRPADLVARYGGEEFA 412 Query: 295 VIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNPQMS-HYREWLK 350 VI+ T A+ AI + +G+ TL++P+ + + +S+GV+ L P + + Sbjct: 413 VILPNTNAKGAIHVAETIRQGVETLKIPHGGSESSKYVTLSLGVSSLIPNSLVNVEGLIN 472 Query: 351 SADLALYKAKKAGRNRTEV 369 AD ALY+AK GRN+T Sbjct: 473 QADQALYRAKAGGRNQTVA 491 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 4/184 (2%) Query: 191 VSYQTATKLA--EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ Q + +A + + RL+ S RD +TG++NRR+ E E +R+N +++ D Sbjct: 780 VAEQVSLAIANIKLRERLENQSIRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGD 839 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 IDHFK ND GHD GD + + R LQ +RGSD+ R+GG+E +++ T E + Sbjct: 840 IDHFKQFNDQLGHDAGDHVLKTIGRILQSNIRGSDIACRYGGEEMTIVLPQTSLEDTLVK 899 Query: 309 MLRVHEGLNTLRLPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + + + ++ + + TL +S+GVA +++AD ALY+AK AGRNR Sbjct: 900 AESLRQAIASMEVEYKGKELGTLTVSLGVACYPNHGETMVNIIQAADRALYQAKAAGRNR 959 Query: 367 TEVA 370 +A Sbjct: 960 VVMA 963 >UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA43_HYDS0 Length = 610 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 3/181 (1%) Query: 189 GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 ++ TK E L S D +TG+YNRR+ + L + +R+ R ++++ D Sbjct: 432 AVFTFVDITKEKELSELLLKQSIEDTLTGIYNRRYLKDKLERHVNLAKRYERPLSVIMFD 491 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 ID FK INDT+GHDVGD+ ++A+++ + +R +D+ R+GG+EF ++ T E A Sbjct: 492 IDFFKHINDTFGHDVGDKVLIAISKVVSENIRNTDIFARYGGEEFIIVAPETTKEDAKIL 551 Query: 309 MLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 ++ + L + + S GV L LK D ALY+AK+ GRNR Sbjct: 552 AEKLRSLIRNLHFEEG--INVTCSFGVVSLEK-PDTKETLLKRVDNALYEAKRTGRNRVV 608 Query: 369 V 369 V Sbjct: 609 V 609 >UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZ07_SHESH Length = 298 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 76/273 (27%), Positives = 146/273 (53%), Gaps = 18/273 (6%) Query: 112 WVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGL--VLMVVSCLVTLELTGITVSFNS 169 + V+G ++ S A+L+ M + + +L GL + L+ + + G + Sbjct: 4 ILPVLGSGLVISGALLLAMAIAPVWKIVRQLPTGGLRYSWGFLILLILIFIAGYVIYAKF 63 Query: 170 APLEWW----LSLPIIVIYPLLFGWV----SYQTATKLAEHKRRLQVMSTRDGMTGVYNR 221 +P+++ L +PII +F +V S +T + + L+ + D + G++NR Sbjct: 64 SPVQFSQLFDLVVPIIFFGGAIFVFVVCSLSLRTTRDIMQ-NYALKQENITDSLMGIFNR 122 Query: 222 RHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG 281 R+ + L++E + +++ ++ +IDIDHFK +ND +GH VGD + + + ++ +LR Sbjct: 123 RYLDRRLKDETERALNYSQPLSIFLIDIDHFKQVNDNYGHQVGDLVLKNIAQLIKHSLRE 182 Query: 282 SDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL-------PNTPQVTLRISVG 334 SDV+ RFGG+EF VI+ T ++ T R+ + +L ++ +++ +S+G Sbjct: 183 SDVLARFGGEEFVVILPRTKDSTSYTLAERLRHVVEDFQLTLPEESDKDSLSISVTVSIG 242 Query: 335 VAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 VA LN Q + +++AD ALY+AK+ GRN+ Sbjct: 243 VAGLNAQCKDCQCLIENADRALYQAKRNGRNQV 275 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 11/213 (5%) Query: 166 SFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWE 225 + ++ L +SL ++ + +L + A +L + ++VMS D +T ++NRRH+E Sbjct: 207 TLIASGLTAAISLSLLSMIWILVS----RLARRLTKAYETIEVMSITDELTRLHNRRHFE 262 Query: 226 TMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVI 285 T L E R+ +L+I+DIDHFK +ND +GH GD + L+ +R +DV Sbjct: 263 TRLAEEISRSLRYGSPMSLMILDIDHFKRVNDNYGHQAGDWVLTQFATLLKDNVRKADVP 322 Query: 286 GRFGGDEFAVIMSGTPAESAITAMLRVHEGLN--TLRLPNTPQVTLRISVGVAPL----- 338 R+GG+EF VI++ + A A +V + +P+ + + +SVGVA L Sbjct: 323 ARWGGEEFVVILTESTISQARMAAEKVRRNVESAEFNIPDGRSIPVTVSVGVASLDMISG 382 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + S +K+AD ALY+AK+ GRNRT + Sbjct: 383 DEMGSEADVLVKTADDALYRAKQEGRNRTVAVS 415 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 66/191 (34%), Positives = 107/191 (56%), Gaps = 3/191 (1%) Query: 184 YPLLFGWVSYQTATKL--AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 + +L V+ Q K L+ S DG+TG+YNRR+W+ C R + Sbjct: 134 FCMLVYDVTEQALGKRGMEHLNEELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRREKP 193 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 +T L++DIDHFK INDT+GH GD+ I L ++ +R +D+ GR+GG+EFA+I++ + Sbjct: 194 STALMLDIDHFKRINDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSS 253 Query: 302 AESAITAMLRVHEGLNTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 E A R+ + L + + + ++ +S+G+A +P WL+ AD ALY+AK Sbjct: 254 VEDAKIVAERIRQLAQRLVVEHEGESISFTVSLGLAQFSPDFKGAMAWLECADQALYEAK 313 Query: 361 KAGRNRTEVAA 371 + GRN+ + A Sbjct: 314 ENGRNQYRIYA 324 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 1/176 (0%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 ++ + LQ ++ RD +TG+YNRR+ + L E RR +L+++DIDHFK Sbjct: 460 RIEEIGRLQVALQELAVRDSLTGLYNRRYLDETLEREVSRARREGIPLSLVMLDIDHFKQ 519 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 +NDT+GH VGDE + L L +R DV R+GG+EF +++ P E+ + Sbjct: 520 VNDTYGHQVGDEVLRILASTLSADIRAEDVACRYGGEEFLILLPNMPLETTMLRAQGWRS 579 Query: 315 GLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + L + + Q+T IS+GVA + + AD ALY+AK GRN+ V Sbjct: 580 AVEALSVKHGNFQITFTISLGVAAYPEHGKTPDDLTRCADQALYRAKNEGRNQVSV 635 >UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepID=Q21NS3_SACD2 Length = 319 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 63/173 (36%), Positives = 99/173 (57%), Gaps = 1/173 (0%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 ++ +L +S DG+TG+ NR+ WE E+ +RH +L++ DIDHFK+IND Sbjct: 144 QIQAANLQLHEISRTDGLTGLLNRKTWELDAEQEYKRFKRHEHPCSLVMFDIDHFKNIND 203 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 ++GH GDE I ++ +R D+ GR+GG+EF +++S T E A+ R+ + Sbjct: 204 SYGHPAGDEVIRQTAAAVKSCIRDIDIAGRYGGEEFTIVLSDTDTEGALVVAERIRNQIQ 263 Query: 318 TLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 L + + +S+GVA L QM++ W+ AD ALY+AKK GRN + V Sbjct: 264 ELTVHYEDFAIQFTVSLGVAQLTQQMTNRTAWIDCADKALYQAKKNGRNNSVV 316 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 3/178 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + T E +R L+ + D +TG+ NRR++ + E +RH +LL++D+DHFK Sbjct: 433 RDITDRKELERELESQARTDVLTGLNNRRYFFELAELELARAKRHGNQFSLLMLDVDHFK 492 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 ND++GH +GD + L+ TLR D+ GR GG+EFA+++ T + A+ R+ Sbjct: 493 LFNDSYGHHIGDRVLQKLSEVCMHTLREIDLSGRIGGEEFAIMLPETRGDRAMEVAERLR 552 Query: 314 EGLNTLRL---PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + + V +S+GV L + LK AD ALY AK AGRN+ Sbjct: 553 LAIAGAPVLLEQQSTFVHFTVSIGVTSLVAAGRQVDDLLKRADDALYAAKNAGRNQVC 610 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 130/292 (44%), Gaps = 38/292 (13%) Query: 112 WVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAP 171 W ++ + S + ++ + + G + L ++ L+ ++ S + Sbjct: 177 WWRLLTEYLSISLFLGAVLWMLVQNIRGY------MPLQYGIAMIWFALSCLSFSIGTVW 230 Query: 172 -LEWWLSLPIIVIYPLLFGWV------------------------------SYQTATKLA 200 +WWL+ I LL + S + +L Sbjct: 231 DHQWWLAHIIFASGFLLLSFGVVQAFLTTGSFKTIYSQTELFQQIIREKKKSERALIELK 290 Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 ++L+ ++ D +T V NRR + E R++ D L++ID DHFK IND +G Sbjct: 291 AVNQKLEELAATDSLTRVANRREFMKRSEEEMSRSSRNSTDLCLMVIDFDHFKEINDQYG 350 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H GD+ + + + +R SD++GR GG+EFA+++ T SA+ R+ + + Sbjct: 351 HQAGDKVLKDFVKLAKEVMRPSDLLGRIGGEEFALLLPETNIRSAVKVAERLRQHIEEES 410 Query: 321 LP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + ++ L IS+GVA P++ ++WL AD LY+AK GRNR V A Sbjct: 411 IVIGSKRIKLTISIGVAEYQPKVDTVKKWLHRADEFLYQAKDKGRNRVVVEA 462 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 120/240 (50%), Gaps = 5/240 (2%) Query: 131 CLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGW 190 CL + G ++ G V+ +S + + +T I + + ++ I + + + Sbjct: 186 CLECHRSQGYKI---GSVMGALSVTIPV-VTLIRETDTDKLMIVAATIGTIGLLLGITYF 241 Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 ++++ L ++ L+ +++ D +TG+ NRR L E+ R L+++D+D Sbjct: 242 LTWRLVLNLDMAQKHLKRLASTDELTGLKNRRQIMKRLDEEYQRAIRLGEPLCLIMLDLD 301 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFK INDT+GH GD + + ++ LR DV+GR GG+EF ++ GT E A+ Sbjct: 302 HFKKINDTYGHPFGDLVLKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGTTREEAVVLAQ 361 Query: 311 RVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 R+ + ++ +VT+ +S GVA L + LK AD ALY AK+ GRNR Sbjct: 362 RLRSTVEMEKIAYEDKKVTITVSCGVAFLYKGDDNVEILLKRADSALYIAKQEGRNRVVA 421 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 10/218 (4%) Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMST 211 + LV E F + + ++ + ++V L ++ L K R + M+ Sbjct: 291 IGYLVYYEKDNTYGVFKNTFIISYVGINLLVGLLLTMSFI-------LGVIKERFKAMAE 343 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 D +TG+YN+ + +L+ E D +R+ R +L+I DIDHFK IND +GH GD + L Sbjct: 344 IDTLTGIYNKGKFNHLLQVELDRSKRYGRPLSLIIFDIDHFKKINDAFGHQAGDYVLKTL 403 Query: 272 TRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRI 331 + + +R +D R+GG+EF ++ T E A ++ + + + Sbjct: 404 AKIVSSNIRSTDFFARWGGEEFVILAPETDLEGAQILAEKIRKAIEEYPFETVG--KVTS 461 Query: 332 SVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 S GV + ++K AD+ALYKAK GRNR E+ Sbjct: 462 SFGVTEAF-ENDTVDSFVKRADVALYKAKDKGRNRVEI 498 >UniRef50_B7K273 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Cyanobacteria RepID=B7K273_CYAP8 Length = 308 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 1/175 (0%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L E + ++ ++ D +TG+ NRR + EF R+ LL+ID+DHFK Sbjct: 130 QVQKQLQEACQTMKKLADTDELTGIANRRCLLEFAQREFQRSLRYGTPFCLLMIDVDHFK 189 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +IND +GH GD+AI + +++ LR D GRFGG+EF V++ T A+ R+ Sbjct: 190 NINDKYGHPNGDKAIQWVVEIIKLGLREVDFFGRFGGEEFIVVLPQTALGGALEVAERIR 249 Query: 314 EGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 E + + L VTL S+GVA + ++ AD +LY+AK GRN+ Sbjct: 250 EAIASQPLTLEQDTVTLTASIGVATYTGEDKTVVGMIQRADKSLYQAKAKGRNQV 304 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 2/177 (1%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 A +L + ++ L ++T DG+T VYNRR + L E + +R +L+++DIDHFK + Sbjct: 252 ANQLEQSQQDLYRLATLDGLTEVYNRREFNRWLLVEIERSQRGEHPVSLIMVDIDHFKRL 311 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH GD A+ + + LQ +R D++ R+GG+EF VI+ + + R+ Sbjct: 312 NDTYGHQAGDLALCEVAQLLQREVRPGDIVCRYGGEEFGVILPKATSADSWVIAERIRLA 371 Query: 316 LNT--LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + LP+ + + S+GVA +K AD ALY AK GRNR A Sbjct: 372 IAEKSVVLPSQQHIDMTASLGVATYPDHADCKERLVKQADQALYTAKYQGRNRVHSA 428 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 2/176 (1%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L L+ +S D +T ++NRRH M+ EF R +L+I+DID+FK IND Sbjct: 130 ELKRSNEMLRTLSITDPLTHLHNRRHLMEMVDKEFQRSSRKGAPLSLVILDIDYFKKIND 189 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 T+GH GD + L ++ LR D+ R+GG+EF +++ TP + A++ R+ + Sbjct: 190 TYGHQEGDRVLTILADIVRRRLRSYDLAARYGGEEFVLLLPETPVQEALSIAERLRLEVQ 249 Query: 318 TLRLPNT-PQVTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + + IS+GVA + + AD ALY+AK+ GRNR E+ A Sbjct: 250 EHVFEGSLGGLVITISLGVATYPSSRVESIDSLFRQADEALYRAKQGGRNRVELMA 305 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 69/176 (39%), Positives = 101/176 (57%), Gaps = 3/176 (1%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 + T+ E + L+ + D +T NR ++ET+L E +R+ +LL++DIDHF Sbjct: 615 FHDITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLLLLDIDHF 674 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 K INDT+GH+VGDE + L L+ LR +DV+GR+GG+EF V++ GT AE ++ Sbjct: 675 KRINDTFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERGQHVAEQL 734 Query: 313 HEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 E + P + IS+GVA P R+W+K AD A+Y AKK GRNR Sbjct: 735 REQVTATAFPCVGL--VTISLGVAECRP-GESIRDWVKRADEAMYVAKKGGRNRVV 787 >UniRef50_Q21V79 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21V79_RHOFD Length = 380 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 93/320 (29%), Positives = 138/320 (43%), Gaps = 31/320 (9%) Query: 74 VGWAFVWP--HLAWQIASRA--VDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMI 129 V +W +LA+ + R V P L T L +W V V PS M ++ Sbjct: 69 VSSFLLWSGLYLAYVGSQRFFGVKPRIAPWMALITGLALVQLWFSV----VEPSYHMRLV 124 Query: 130 MC-----------LNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNS-----APLE 173 + L+ G F GL + V+ L ++ + SF++ A Sbjct: 125 LTTVATACLSGVHAWLVFRQGSITFSRGLAVGVLVFLFGAQVMRLVTSFSAPFPLNAEFF 184 Query: 174 WWLSLPIIVIYPLLFGWVSYQTATKLAEHKR---RLQVMSTRDGMTGVYNRRHWETMLRN 230 +L + I F + + + L R L+ ++ D +T RRH + R+ Sbjct: 185 DTSTLQLTYITSFAFSVLLFSISAVLMATDRLRIELEHLANHDSLTNALTRRHMDDACRS 244 Query: 231 EFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGG 290 E + CRRH LLI+D+DHFK IND +GH GD+A++ ++ LRG D +GRFGG Sbjct: 245 ELERCRRHGHSMALLIMDLDHFKEINDIYGHQAGDQALINFVARVNALLRGPDQLGRFGG 304 Query: 291 DEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLK 350 +EF ++ T + AI R+ +S+GV L Sbjct: 305 EEFVALLPETSLDEAIAVAERIRGACTLA----GQAPACTVSIGVTTNRKDNDSVDTLLA 360 Query: 351 SADLALYKAKKAGRNRTEVA 370 AD ALY+AK AGRNR EVA Sbjct: 361 RADAALYRAKAAGRNRVEVA 380 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 12/194 (6%) Query: 177 SLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCR 236 S+ I+ ++ +LF + + + + M+T D +TG++NR ++ + E Sbjct: 304 SILILFLFTILFYFAISRI---------KFEEMATVDKLTGLFNRHKFQEIAEIEIKRSH 354 Query: 237 RHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVI 296 RH R ++++ DIDHFK INDT+GHD+GD + L + ++ +R D R+GG+EF ++ Sbjct: 355 RHKRPLSVILFDIDHFKKINDTYGHDIGDVVLRELAKIIKQNIRKYDYAIRWGGEEFLIL 414 Query: 297 MSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLAL 356 T + A ++ + + + P + IS+GVA ++P + +K AD AL Sbjct: 415 TPETDEKQAFAMAEKLRKAVESHTFPEVG--KVTISLGVASVDPN-ESIDQAIKKADNAL 471 Query: 357 YKAKKAGRNRTEVA 370 Y +K GRN+T VA Sbjct: 472 YGSKLGGRNKTTVA 485 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 4/184 (2%) Query: 191 VSYQTATKLA--EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ Q A +A + + LQ S RD +TG++NRR+ E L E + R++ + +++ID Sbjct: 820 VAEQMALAIANLQLREELQNRSIRDPLTGLFNRRYLEESLEREINRACRNDHNVGVIMID 879 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 IDHFK NDT+GHD GD + + + L+ +LR SD+ R+GG+E +I+ E+ Sbjct: 880 IDHFKRFNDTFGHDGGDAVLKEVGKLLKSSLRASDIACRYGGEEMTLILPEASIENTYKR 939 Query: 309 MLRVHEGLNTLRLPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 +V + + + + + Q T+ S+GVA ++ AD ALY+AKK GR+R Sbjct: 940 AEQVRKLIKQINIEHKRQSLGTITASLGVACFPEHGMTGDAVVQRADTALYQAKKEGRDR 999 Query: 367 TEVA 370 A Sbjct: 1000 VVGA 1003 >UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Nostocaceae RepID=B2J0M5_NOSP7 Length = 888 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 66/230 (28%), Positives = 120/230 (52%), Gaps = 9/230 (3%) Query: 148 VLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLL--FGWVSYQTA--TKLAEHK 203 MVV L L G+ ++ + +W + + ++ L +Q+ ++ Sbjct: 651 AAMVVPILNGEHLWGLLIAHQCSAPRYWQAFEVNLLQQLASQVAIAIHQSVLYQQVQAAN 710 Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 LQ ++T DG+T + NRR ++ L NE+ +R +L++ D+D FK NDT+GH Sbjct: 711 EELQRLATLDGLTQIANRRRFDQYLENEWHRLKREQMPLSLILFDVDFFKRYNDTYGHLA 770 Query: 264 GDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 GD+ + L L+ + R +D++ R+GG+EFAVI+ T E AI+ + + + L +P Sbjct: 771 GDDCLRQLGSALKSVIKRPADLVARYGGEEFAVILPNTEIEGAISVAQTIRQAVYDLIIP 830 Query: 323 NTPQV---TLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTE 368 + + +S+GVA + P + ++ + +AD +LY AK+ GR+R Sbjct: 831 HAQSSVCDRVTVSLGVASIVPNCETSPQDLINAADKSLYIAKQQGRDRVH 880 >UniRef50_Q2SPL7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL7_HAHCH Length = 405 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 102/388 (26%), Positives = 173/388 (44%), Gaps = 29/388 (7%) Query: 6 MNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPP 65 M F + + + PP Q+ A R R A A+ + S P Sbjct: 1 MRGFAFHRNSPNKRDLPPALRDELEQQRKRDLANRQRPGILFYPATWVFISAAIMFSSPT 60 Query: 66 PG---WWW--LVLVGWAFVWPHLA-WQIASRAVDPLSREIYNLKTDAVL-AGMWVGVMGV 118 P W +L+ + + A Q + L A A +W GV + Sbjct: 61 PEKSLWLAYAALLIFAVSSYRYYAMHQFMRKLESGREASYTPLLLGAGFSASLWGGVAAL 120 Query: 119 NVLPS-----TAMLMIMCLNLMGAGGPRLFVAG-LVLMVVSCLVTLELTGITVSFNSAPL 172 +VLP+ + + L L G L + G +V + + CL+ + ++++ P Sbjct: 121 SVLPTPFAPHFPLFLTCTLGLCAGGAASLAILGRMVNLFIICLLAPMTLALFSAYSTQPG 180 Query: 173 EWWLSLPIIVIYPLLFGWVS----------YQTATKLAEHKRRLQVMSTRDGMTGVYNRR 222 +++ + L W+S + KL++ L ++ +DG+TGV NRR Sbjct: 181 VIGF---LLISFGLGMSWISTLPRHEYEVAVLSIIKLSQQANYLTELTIQDGLTGVKNRR 237 Query: 223 HWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RG 281 +++ +L + R N +LL+IDIDHFK +ND +GH +GDE +V + L L R Sbjct: 238 YFDQILSADLRRASRLNYPISLLLIDIDHFKRVNDRYGHLIGDECLVQTAQTLMRQLQRN 297 Query: 282 SDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN-TPQVTLRISV-GVAPLN 339 SDV+ R+GG+EF +I+ G AE A ++ + + N + V++ IS+ GV+ + Sbjct: 298 SDVLARYGGEEFGIILPGVDAEEAAALAEKLRSAVAACAVWNLSDPVSVTISIGGVSGVP 357 Query: 340 PQMSHYREWLKSADLALYKAKKAGRNRT 367 + ++ L+ AD ALY+AK GRN Sbjct: 358 KETMTPKQLLELADKALYQAKSYGRNCV 385 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 3/203 (1%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 N ++ LSL + I + ++ + L S D +T +YNRR + M Sbjct: 493 NGHEIDVELSLSAVRIKDSWHAIGIIRDISERKRFEELLYRQSITDPLTNIYNRRFFMQM 552 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGR 287 L E + +R+ + +L++ D+DHFK++ND +GH GD + ++ ++ +R +D R Sbjct: 553 LEQEIERVKRNKKLFSLIMFDLDHFKNVNDRFGHAAGDMVLKSVADTVKGRIRKTDYFAR 612 Query: 288 FGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYRE 347 +GG+EF +++ T +A + + ++ L + S GV Sbjct: 613 WGGEEFIILLPETSLNNAAELAEELRKKISETELDGIG--KVTASFGVTEYR-NTDTVDT 669 Query: 348 WLKSADLALYKAKKAGRNRTEVA 370 L D ALY+AK +GRN ++A Sbjct: 670 VLLRVDGALYEAKGSGRNCVKIA 692 >UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVG8_9CYAN Length = 329 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 59/181 (32%), Positives = 102/181 (56%), Gaps = 7/181 (3%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T +L + + + D +TG++NRRH ++ E+ +NR +++++DIDHFK Sbjct: 130 TKDELNKKSAAFEKQAITDPLTGIFNRRHLMSISEIEYQKAVNYNRLFSIIMLDIDHFKK 189 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 +NDT+GH VGD+ + +T+++Q LR DV GRFGG+EFA+I+ G + A+ R+ + Sbjct: 190 VNDTYGHIVGDQVLKRMTQEVQNLLREGDVCGRFGGEEFAIILPGADLKIALKIAERLRQ 249 Query: 315 GLNTLRLP-------NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + +P + ++ + IS+GV + + + AD ALY+AK GRN+ Sbjct: 250 AIADFYIPIYDSNSSSNLKIKITISLGVTTYHIDDDKLDKMWRRADDALYQAKAKGRNQV 309 Query: 368 E 368 Sbjct: 310 C 310 >UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLJ7_DESAH Length = 576 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 103/182 (56%), Gaps = 6/182 (3%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 +T +L ++LQ + T DG+T + NRR ++ L E+ C+R +LL+ DID+FK Sbjct: 388 ETQKRLETANQKLQTLVTSDGLTMIANRRKFDEYLDQEWQRCKRAKVWLSLLMCDIDYFK 447 Query: 254 SINDTWGHDVGDEAIVALTRQL-QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 NDT+GH GD+ + + + + + +R D++ R+GG+EFAVI+S T A R+ Sbjct: 448 HYNDTYGHQAGDDCLRKIAQAMEKTVVRPMDLVARYGGEEFAVILSDTGLNGACHVARRI 507 Query: 313 HEGLNTLRLPNTP---QVTLRISVGVAPLNPQMSHY--REWLKSADLALYKAKKAGRNRT 367 E + L + ++ + +S+G+ L P +K+AD ALYKAK+ GRNR Sbjct: 508 QEDVKNLNIAHSESSVSTHVTLSIGITCLIPDDEDLSMDLLIKTADEALYKAKRKGRNRM 567 Query: 368 EV 369 E+ Sbjct: 568 EL 569 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 4/183 (2%) Query: 191 VSYQTATKLAEHKRR--LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ Q +A R L+ S RD +TG++NRR+ E L E +R ++++D Sbjct: 1196 VAEQIGMAIANLNLRATLEHQSIRDPLTGLFNRRYLEEYLSQEIARAQRQKHPIGVIMMD 1255 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 ID+FK NDT+GHD GD + + L+ +R DV R+GG+E +I+ G+ E+ Sbjct: 1256 IDNFKHFNDTFGHDAGDYVLQKVGELLKQKVREYDVACRYGGEEMTLILPGSSLENTSMR 1315 Query: 309 MLRVHEGLNTLRLPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 ++ E + +L + + Q ++ S GVA S + +++AD ALY+AK GRNR Sbjct: 1316 AEQIREAIASLVVASGGQHLGSITASFGVAAFPKHGSIGIDLIQAADAALYRAKADGRNR 1375 Query: 367 TEV 369 + Sbjct: 1376 VVI 1378 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 100/174 (57%), Gaps = 4/174 (2%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L + ++LQ +S D +T +YNR HWE L+ E+ RH LL++DIDHFKSIND Sbjct: 144 LQKANQQLQHLSRTDHLTQLYNRGHWEQRLQFEYS---RHGSSIALLMLDIDHFKSINDR 200 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 GH GD I ++ + +R SDV GR+GG+EFA+++ T A T R+ + + Sbjct: 201 HGHQAGDAVIKRVSELIHQHVRDSDVAGRYGGEEFAILLPHTDLAGARTLAERLRQSVEE 260 Query: 319 LRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + Q + IS+G+A L+ +R ++ AD ALY +K+AGRNR A Sbjct: 261 QEVIHNGQAIAFTISLGIACLDRPARDHRCLIEWADQALYASKRAGRNRVSTYA 314 >UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8W1_MAGSM Length = 564 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 100/178 (56%), Gaps = 4/178 (2%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T +++L+ +ST DG+T + NRR + +L E R+ + ++L++D+DHFK Sbjct: 383 DVTDEKRLEQQLRELSTTDGLTKLINRRRMDELLDEELKRAVRYGLNLSILLLDVDHFKK 442 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 NDT+GH+ GD ++AL +++ R D R+GG+EF VI+ T A+ AI R+ E Sbjct: 443 FNDTYGHEQGDHVLIALAAEMKSYFRNIDYPCRYGGEEFFVILPNTDADGAIKVADRLRE 502 Query: 315 GLNTLRLPNTPQVTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + + + IS+GVA ++ +++AD ALY AK+ GRN+ A+ Sbjct: 503 RVAEKEVDG---LRVTISIGVASYPDLSITRPDAMVRAADSALYVAKEQGRNKVVYAS 557 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 5/182 (2%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 Q +L + + +L + DG+T V NRR +E + E+ +R R L+++DIDHF Sbjct: 319 IQILMQLKQSQDQLARSARVDGLTQVNNRREFERNIEMEWRRAQRSKRSLALIMLDIDHF 378 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 K ND +GH GD + + + ++ ++ R D++ R+GG+EF VI+ T + A R Sbjct: 379 KPFNDGYGHLAGDGCLRTVAQTIKHSIQRAQDMVCRYGGEEFVVILPETDLDGAQMIAER 438 Query: 312 VHEGLNTLRLPN---TPQVTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRT 367 + + + L++ + + T+ IS GVA L+P E + AD LY+AK GRN+ Sbjct: 439 IRKAIAKLKINHEFSSTDNTITISAGVACLSPSQEGSPHELILLADQGLYQAKAQGRNQV 498 Query: 368 EV 369 + Sbjct: 499 AI 500 >UniRef50_Q21HV6 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q21HV6_SACD2 Length = 301 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 64/176 (36%), Positives = 95/176 (53%), Gaps = 2/176 (1%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 Q L + + L+ ++TRD +TG+ NRR + + E RH RD LL++D DHF Sbjct: 122 IQAKRDLEKANKELERLATRDPLTGINNRRSFFKLAEAELTKTIRHGRDIALLMLDADHF 181 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 K INDT+GH GDEA++ +T Q R SD++ R GG+EFA+ T E A R+ Sbjct: 182 KMINDTYGHAAGDEALLTITEICQNACRESDILARLGGEEFAICCPDTNLEGAYAVAERI 241 Query: 313 HEGLNTLRLPN-TPQVTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNR 366 + + + + + +S+G+ P Q E L+ AD LY+AK+ GRNR Sbjct: 242 RQQCENTVIEHNSASFGITLSIGITTFVPSQDKSITEMLQRADNLLYQAKEMGRNR 297 >UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C76_DECAR Length = 548 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 100/178 (56%), Gaps = 2/178 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T + +++ L+ +S D +T ++NRRH+ ++ ++E + R+ +++++DIDHFK Sbjct: 365 DITPIKHYQKELERLSQFDELTNLFNRRHFFSLAKHELNRSSRYRSKLSVMMLDIDHFKR 424 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 IND GH GD + + +Q+ +LR SD+ GR GG+EFA+++ T E A R+ + Sbjct: 425 INDGHGHKTGDLVLANIGKQIGDSLRDSDIAGRMGGEEFAILLPETDLEQASIMAERLRK 484 Query: 315 GLNT--LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + L + + + +S+G+A + Q L AD ALY AK +GRN+ A Sbjct: 485 QVAETWLDIGDGRTLNCTLSIGLATKSDQQIDLENLLHQADTALYAAKNSGRNKVSCA 542 >UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSY0_9GAMM Length = 261 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 66/234 (28%), Positives = 116/234 (49%), Gaps = 9/234 (3%) Query: 142 LFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFG----WVSYQTAT 197 L A + V C + L L G + W ++P +I P G ++ Sbjct: 17 LMTAVVSGSTVCCALGLILLGFPIG----GKVWNFAVPAALIIPFFVGTPLVHNLIKSNI 72 Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 KL +++L+ ++ +D +TG+YNR+++ CR ++ +LL++D+DHFKSIND Sbjct: 73 KLLRVQKQLEELANKDALTGLYNRQYFFDHANEWDKRCRENSGHFSLLMLDVDHFKSIND 132 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 +GH VGD + ++ ++ +R D+ R+GG+EF ++ T A A R+ G+ Sbjct: 133 RFGHPVGDRVLQRVSNVIKGFMRQEDMCARYGGEEFICLLPDTNAAGAKAVAERIRLGME 192 Query: 318 TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 ++L +S+G ++ + ++ AD ALY+AK GRNR A Sbjct: 193 HQAFLKARGLSLSVSIGATTMSAN-DNLETLIERADQALYEAKDGGRNRAVFKA 245 >UniRef50_B9QXS2 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXS2_9RHOB Length = 543 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 71/226 (31%), Positives = 121/226 (53%), Gaps = 13/226 (5%) Query: 156 VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATK---------LAEHKRRL 206 +TL + V+ PL + + + + ++ L+ ++ ++ +K L + R+L Sbjct: 302 ITLVASQAYVNGLKDPLLYLIPISLTSVFALVLVFMFFEERSKVRLKLAHGKLEQANRQL 361 Query: 207 QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDE 266 ++ +D +TG+ NRR + L + RH A+ L++D+D FK INDT GH GDE Sbjct: 362 DALARQDALTGLANRRAFFDRLDQLLNELDRHPHPASFLMLDLDKFKIINDTRGHAAGDE 421 Query: 267 AIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ 326 + A Q T+R DV+GR GG+EFA+++ T AE A R+ + +R T Sbjct: 422 VLKAFASLCQETVRKVDVVGRIGGEEFAILLPHTSAEDATVFAERLRTAVAAIRFSETGP 481 Query: 327 ---VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 +T +S+G++ ++ ++ R WL AD ALY++K +GRNR V Sbjct: 482 LSGLTFTVSIGLSAISERI-DARTWLSQADKALYQSKASGRNRVTV 526 >UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0Y0_9NEIS Length = 528 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 82/270 (30%), Positives = 132/270 (48%), Gaps = 12/270 (4%) Query: 111 MWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAG-LVLMVVSCLVTLELTGITVSFNS 169 +W + S +++ + ++ G L++ V + L G + + Sbjct: 246 LWRTAAAESRRLSLQLVIAIVAGVLIYGWLTLWLGSNTVRHALRASELAILPGAVTTMLA 305 Query: 170 APLEWWLSLPIIVIYPLLFGW--------VSYQTATKLAEHKRRLQVMSTRDGMTGVYNR 221 ++ +I + FG+ S + +LAE +L ++ D +TG+ NR Sbjct: 306 TTWTFYWVFALIAAFVGFFGYRMFTYWLDSSTRLVNELAEANSKLAHLARTDTLTGLPNR 365 Query: 222 RHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG 281 R E L + RR+ A+L+++DIDHFK +ND +GHD GD I AL + + T+R Sbjct: 366 RALEEALEQQLQRSRRNGEQASLVLLDIDHFKVVNDRYGHDAGDAVIRALGKAMSETIRN 425 Query: 282 SDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP-QVTLRISVGVAPLNP 340 DV GR+GG+EF V+++ E A R+ + + + + V IS+GVAPL+ Sbjct: 426 VDVAGRWGGEEFLVVLANVDEEGAAAFAERLRTRVESSTVAHGELHVRYTISLGVAPLS- 484 Query: 341 QMSHYREWLKSADLALYKAKKAGRNRTEVA 370 H WLK AD ALY+AK GRNRT +A Sbjct: 485 -TPHREAWLKRADEALYRAKLDGRNRTAIA 513 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 16/267 (5%) Query: 107 VLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVS 166 +L + V + +VLPS + LF G+ +V+S + + L Sbjct: 332 MLGAILVALNKFDVLPSNMITEYSM----------LFGTGVGTVVLSAALAVRLNDEKNK 381 Query: 167 FNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWET 226 A E +L + L + + L E +L+ +S D +TG+ NRR + Sbjct: 382 RYHAQAE---ALRVQRESVELLEERVKERTSALREANEKLEKLSNTDSLTGLNNRRSLDE 438 Query: 227 MLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVI 285 +L E R + +++DID FK+ NDT GH VGD + A+ + T R SDV+ Sbjct: 439 LLAMEVKRTCRTGAPLSAMMMDIDRFKAFNDTHGHQVGDACLKAVAGVIASTAQRPSDVV 498 Query: 286 GRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ-VTLRISVGVAPLNP-QMS 343 GR+GG+EF V++ TP + A R+ + L + Q V + IS+GV+ L Sbjct: 499 GRYGGEEFCVLLPDTPLDGAQIIAERIRAAVENLDFTVSGQRVPVTISIGVSELTYCASD 558 Query: 344 HYREWLKSADLALYKAKKAGRNRTEVA 370 + +++AD ALY AK AGRN +A Sbjct: 559 SGKALVEAADEALYSAKSAGRNCVRLA 585 >UniRef50_B7KGV0 Response regulator receiver modulated diguanylate cyclase n=3 Tax=Chroococcales RepID=B7KGV0_CYAP7 Length = 465 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 133/250 (53%), Gaps = 13/250 (5%) Query: 133 NLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVS----FNSAPLEWWLSLPIIVIYPLLF 188 NL+G + F++ L +++ + + TG T+ + +E W + + Sbjct: 204 NLIGKIMLKKFLSNLDPKLMNAFIEVVNTGNTLEKEFYYQKDNVERWYHFIALKLGDGFS 263 Query: 189 GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 ++ + T+ + +L ++ DG+TGV NRR++E L E+ R + +L++ D Sbjct: 264 --ITVRDITERKLMELKLHQLARLDGLTGVANRRYFEETLAKEWKRGIRDKQPLSLILCD 321 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAIT 307 ID+FK NDT+GH GDE ++ + + + + R +D++ R+GG+EF +I++ T + AI Sbjct: 322 IDYFKIYNDTYGHLKGDECLIRVAKAINRAVKRSTDLVARYGGEEFGIILTNTERQGAIA 381 Query: 308 AMLRVHEGLNTLRLPNT-----PQVTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKK 361 + + +N L++P+ + +S+GVA L PQ + + SAD ALY+AKK Sbjct: 382 IAQSIQKAVNQLKIPHPNPREKNHHYIAMSLGVASLIPQKKLSPKILVASADKALYEAKK 441 Query: 362 AGRNRTEVAA 371 GRN V++ Sbjct: 442 QGRNCINVSS 451 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 1/177 (0%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 A + H+++L ++T+DG+T + NRR + + E + RRH ++L++D+DHFK I Sbjct: 202 ALQRDGHEKQLYRLATQDGLTELNNRRQFIELADREIERSRRHGSRMSVLMMDLDHFKDI 261 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 ND +GH VGDE I ++ + LR SD+ GR GG+EFA ++ T + A R+ Sbjct: 262 NDHYGHAVGDEVIRHFSQVCREVLRASDLCGRLGGEEFAAVLPDTGLDDARQVAERLRSL 321 Query: 316 LNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 ++ RL + + +S+GVA + + E L AD LY+AK+ GRNR AA Sbjct: 322 ASSARLSAVSGSLGYTVSIGVAERHADETDIDEVLGRADKQLYQAKRDGRNRVSGAA 378 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 3/176 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T+ + +L+ ++T D +TG NRR + E + R+ ++L+IDIDHFK Sbjct: 300 DITERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLMIDIDHFKQ 359 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 +ND GH VGD+A+ A T ++ LR D GR GG+EFA ++ T A+ R+ + Sbjct: 360 VNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGALLVAERLRQ 419 Query: 315 GLNTLRLP---NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + + LP + P + L S+GVA P + L AD ALY+AK GRNR Sbjct: 420 AVEAIALPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKAEGRNRV 475 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 4/184 (2%) Query: 191 VSYQTATKLA--EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V A LA + + + + S RD +TG++NRR+ E L E RR++ +++ID Sbjct: 1065 VVEHLAIALANVKLQEKFKAQSMRDALTGLFNRRYLEESLEQEIHRARRNHYSVGIVMID 1124 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 IDHFK ND +GHD GDE + + R LQ ++R SD+ R+GG+E +I+ Sbjct: 1125 IDHFKRFNDQFGHDAGDEVLKTVARLLQGSIRSSDIACRYGGEELTLILPEASLSDTQAR 1184 Query: 309 MLRVHEGLNTLRLPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 ++ + L+L Q ++ S GVA L+ AD ALY+AK GRNR Sbjct: 1185 SEQIRYMIEHLQLHYENQSLGSITASFGVACFPEHGETLEAVLRIADTALYQAKALGRNR 1244 Query: 367 TEVA 370 A Sbjct: 1245 VVCA 1248 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 4/184 (2%) Query: 191 VSYQTATKLA--EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ Q A +A + + +L+ S RD +T ++NRR+ E L E +RH+ +L+ID Sbjct: 579 VAEQLALAIANLKLREQLEEQSLRDPLTKLFNRRYLEQRLSQELARAKRHHYSVGVLMID 638 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 +DHFK ND+ GHD GD + ++ L+ +R SDV R+GG+E +I+ E A Sbjct: 639 VDHFKRFNDSLGHDAGDRILASIGTLLKNNIRTSDVACRYGGEEITIILPDATLEEASQK 698 Query: 309 MLRVHEGLNTLRLPNTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + + + +++ + ++ ++ S GVA +E ++ AD ALY AK+AGRNR Sbjct: 699 AEFLRQAIAEMKIEYSGKIVNSVTASFGVACYPDHGETGQEIIQIADKALYDAKQAGRNR 758 Query: 367 TEVA 370 VA Sbjct: 759 VIVA 762 >UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clostridium thermocellum RepID=A3DEY5_CLOTH Length = 550 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 61/175 (34%), Positives = 103/175 (58%), Gaps = 1/175 (0%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 A + E +R+ M+T D +TG+YNR +++ LR EF N ++ N D +L I+DIDHFK Sbjct: 374 AMENVELYQRMHEMATIDSLTGIYNRLYFQERLREEFANAKKENYDLSLAIMDIDHFKRF 433 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH GD+ + + ++ +LR D+I R+GG+EF +++ T + A + R+ Sbjct: 434 NDTFGHLFGDKVLKHIAHLMKKSLRSGDIIARYGGEEFVILLPRTSVKEAYDKVERLRNI 493 Query: 316 LNTLRLPNT-PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + + + ++ +S GV+ + E LK+AD ALY AK++GRN + Sbjct: 494 VAKTTIKDELVEASVTVSFGVSSYPEFANTESELLKTADNALYDAKESGRNCVRI 548 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 73/223 (32%), Positives = 106/223 (47%), Gaps = 7/223 (3%) Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMST 211 + +V +L GI ++ + ++V L G SY T + + L+ + Sbjct: 277 LILMVGYDLAGILTEWSKRAGQLAAGFLLLVALATL-GLRSYLTTVR---QREELRRQAD 332 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 D +TGV NRRH ++ +E R+ L ++DIDHFK+INDTWGH GD I L Sbjct: 333 TDPLTGVPNRRHLMSVAEHELARTLRYGGALALFMVDIDHFKAINDTWGHPTGDRVIQVL 392 Query: 272 TRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL---PNTPQVT 328 + + R D GR GG+EFA ++ T E A R+ E + + V Sbjct: 393 AAAMAASAREQDTAGRLGGEEFAAVLPETDLEGAAIMAERLREAVEAITSALDDQGQPVR 452 Query: 329 LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 +S+GVA + + L AD ALY AK GRNR E+AA Sbjct: 453 FTVSIGVAAIQLGDGSVEDILGRADRALYAAKHGGRNRVEMAA 495 >UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWB7_DESAC Length = 513 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 63/175 (36%), Positives = 102/175 (58%), Gaps = 5/175 (2%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 ++ + LQ+ S D +T V NRR ++ L++E+ RR+ +LL+IDIDHFK ND Sbjct: 337 RIESLNKELQLASMTDSLTRVGNRRQFDEHLQHEWLIARRNGTVVSLLMIDIDHFKLYND 396 Query: 258 TWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 T+GH GD+ + ++ + + R +D++ R+GG+EFAVI+ P A R+ + + Sbjct: 397 TYGHQDGDQCLQSVAEVISNQVKREADLVARYGGEEFAVILPDVPLIGAQKVAERIRQAI 456 Query: 317 NTLRLPNTPQVT---LRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRT 367 N L +PN + + +S+G ++PQ E ++ AD ALY+AKKAGRN Sbjct: 457 NDLGIPNVDALKTPWITVSIGYESMSPQSGQDCEELIRFADQALYRAKKAGRNCI 511 >UniRef50_Q2SHG3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHG3_HAHCH Length = 555 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 67/177 (37%), Positives = 104/177 (58%), Gaps = 1/177 (0%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 ++ +L + L+ ++ RD +TG+YNRR ++ L EF+ +R+ TL+++DIDHF Sbjct: 363 FERTKELDKENLELREIAARDSLTGLYNRRFFQNRLNYEFNRAKRYGSGLTLVLLDIDHF 422 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 K INDT GH GDE ++ L+ L +LR SD+I R GG+EF +I+ E T + R+ Sbjct: 423 KIINDTKGHPAGDEVLIRLSSFLSQSLRSSDLIARIGGEEFCIILPEHLDEGVKTFIDRL 482 Query: 313 HEGLNTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 ++ L + + + S GVA + SH ++ LK AD ALY+AK+ GRNR Sbjct: 483 RIEISLLDFQHEGEAFQVTCSFGVAEYRNESSHPKDILKKADEALYQAKRTGRNRIV 539 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 66/179 (36%), Positives = 103/179 (57%), Gaps = 3/179 (1%) Query: 191 VSYQTATKLAEHK--RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ + LA K L+ + RD +TG+YNRR+ E L+ E + +R R +++ID Sbjct: 304 VTRHISLALANIKLCETLKQQNIRDALTGLYNRRYLEESLKKELERAKRKERSLGIIMID 363 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 +DHFK++NDT+GHD GD+ + L LQ +RGSD+ R+GG+E +I+ E+ Sbjct: 364 VDHFKNVNDTFGHDKGDQVLKKLGGFLQRHIRGSDIACRYGGEELTLILPEASLENTRQR 423 Query: 309 MLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 ++ + + L L + TL ISVG+A + LK+AD ALY+AK+ GR+R Sbjct: 424 AEQLRQAVKNLDL-DLCDHTLTISVGIACFPEHGYSGKALLKTADQALYQAKQQGRDRV 481 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 2/173 (1%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L E L+ + T DG+TG+ NRRH++ EF RR+ R ++ + DID FK +ND Sbjct: 435 RLREQAETLERLVTYDGLTGLANRRHFDEQFEYEFRRTRRYKRPLSIAMSDIDFFKKVND 494 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 + H VGDE + + + +R D++ R+GG+EF I + T ESAI A ++ + + Sbjct: 495 NFSHQVGDEVLKKVASIFRENVRAGDLVARYGGEEFVFIFTETNKESAIRAAEKIRKAIE 554 Query: 318 TLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 N + + IS+GVA + E + +AD LY+AK+ GRN+ Sbjct: 555 DYDWSNVHAGLKVTISIGVAE-DAGFDGCDELIAAADSKLYEAKRNGRNQVRA 606 >UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC96_DESAH Length = 1268 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 6/213 (2%) Query: 158 LELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTA--TKLAEHKRRLQVMSTRDGM 215 FN + +L + ++ +LF W +A ++AE +L+ +S D + Sbjct: 1057 WVTLRFEHRFNYKNMWRYLFITALLFSGILF-WNRKLSAFNRQMAEANAKLEQLSVTDRL 1115 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQL 275 TG+YNR + L E R+N +L+++DID FK +NDT GH GD ++ + + + Sbjct: 1116 TGLYNRMKIDDTLLEEIGRVLRYNYPLSLILMDIDLFKQVNDTHGHQAGDAVLIQMAKTM 1175 Query: 276 QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGV 335 +R +D+ GR+GG+EF VI T + A++ + E + P+ +T S GV Sbjct: 1176 DKNIRSTDICGRWGGEEFMVICPHTDLKGALSLAEHLRESIARQIFPHV--ITQTGSFGV 1233 Query: 336 APLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 A + + AD A+Y AK+ GRNR E Sbjct: 1234 AQYG-NGDSEADLIARADRAMYLAKEGGRNRVE 1265 >UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SM80_AERS4 Length = 432 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 2/201 (0%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 + + +++ I + + ++ A L+V +T D +TG+ NRR ++ + Sbjct: 223 DGSEFPQEVTIAKINLGQTTEMTAILRDISERARLVEELKVAATTDPLTGIANRRRFDEL 282 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGR 287 ++ E C+R +LL++DIDHFK +NDT GH GD+AI++L R++ LR D++GR Sbjct: 283 VKQEVQRCQRFGHTMSLLLLDIDHFKQVNDTHGHQQGDQAILSLVRRIAKQLREVDILGR 342 Query: 288 FGGDEFAVIMSGTPAESAITAMLRVHEGL--NTLRLPNTPQVTLRISVGVAPLNPQMSHY 345 +GG+EF +++ T + A + R+ + + L ++ L +S+G++ + Sbjct: 343 WGGEEFIILLPETSLDLAWASAERIRLAIASESHPLGADIEIPLTVSIGISASQGPQDNV 402 Query: 346 REWLKSADLALYKAKKAGRNR 366 ++ AD ALY AKK GRN Sbjct: 403 DNMVRRADTALYLAKKQGRNC 423 >UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C2A6_ACAM1 Length = 420 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 5/180 (2%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T KL E ++L +++ D +TG+ NRR ++ L+ + +R + +LLI DID FK Sbjct: 236 TNKKLDEANKQLSLIANHDALTGLANRRRFDEYLQQIWKQTQREQQPLSLLICDIDFFKQ 295 Query: 255 INDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 NDT+GH GD + + +++ T+ R D++ RFGG+EFA+++ T E R+ Sbjct: 296 YNDTYGHLEGDICLRTVAQKIHQTIVRPLDLVARFGGEEFAIVLPNTDLEGGQVVAERLR 355 Query: 314 EGLNTLRLPNTPQVT---LRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTEV 369 + +LP+ + +S+G A + + + AD ALY+AK++GR++ Sbjct: 356 MIIQKSQLPHRGSSVSEFVTVSIGAATVRSHPHTSVSSLISRADQALYQAKQSGRDQVVA 415 >UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y5_9PROT Length = 671 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 61/181 (33%), Positives = 101/181 (55%), Gaps = 2/181 (1%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 V++ T+ + ++ L+ + D +T + NRRH+ + E +R+ + L+++D+ Sbjct: 488 VVAFHDITERKKFEQELERRAQIDALTSLNNRRHFYELAEQEILRTKRYGKPLALMMLDV 547 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 DHFK INDT+GH VGD + L T+R D+IGR GG+EFA+++ A A A Sbjct: 548 DHFKDINDTYGHHVGDTVLQTLGAVCLQTMREIDIIGRLGGEEFAILLPEATAAQAFDAA 607 Query: 310 LRVHEGLNTLRLP--NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 R+ + + +P ++ IS+GV L + S + LK AD A+Y+AK++GRNR Sbjct: 608 ERLRLAVAAIAMPLEQGQTLSFTISIGVTGLVAKDSDIADMLKRADEAMYQAKRSGRNRV 667 Query: 368 E 368 Sbjct: 668 C 668 >UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD98_LEGLO Length = 721 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 75/239 (31%), Positives = 120/239 (50%), Gaps = 26/239 (10%) Query: 159 ELTGITVSFNSAPLEWWLSLPIIV---IYPLLFGWVSYQTATKLAEHKR----------- 204 EL V+ +S +L +P++ IY LL+ VS + A +++++ Sbjct: 461 ELICNHVNVSSEQALSYLCIPLMAQNDIYGLLYMEVSEEPAGAFSQNQQLLITAFSELTA 520 Query: 205 ----------RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 L+ S RD +TG+YNRR+ E L + R +LL++D+DHFK Sbjct: 521 LAFANVRLRENLRYQSMRDPLTGLYNRRYLEDFLLKQIHQSERTKSPISLLMLDLDHFKK 580 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 INDT+GHD GD A+ L + LQ +R D+ R+GG+EF V T ++ T + E Sbjct: 581 INDTYGHDAGDVALKELGKILQEDIRVGDIAARYGGEEFIVAFYNTDEKTIKTRAESIRE 640 Query: 315 GLNTLRLPNT--PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 ++ L++ P + +S+GVA + E ++SAD ALY AK G+NR + + Sbjct: 641 AVSRLQVKYGAQPVGPITVSIGVAVYPTDGRNTNELIESADKALYFAKTNGKNRIVLYS 699 >UniRef50_A1WTZ7 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Proteobacteria RepID=A1WTZ7_HALHL Length = 308 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 101/206 (49%), Gaps = 6/206 (2%) Query: 171 PLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRN 230 LE I + + L L+ +S RDG+T + NRR + L Sbjct: 102 GLELGAMDYITKPFSPRITRTRVRNHVDLKRKTDALERLSQRDGLTDLPNRRVLDRQLPE 161 Query: 231 EFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQIT-LRGSDVIGRFG 289 E+ C+R + +++++DIDHFK ND +GH GDE + + R L R +D++ R+G Sbjct: 162 EWSRCQRGDTPLSVIMMDIDHFKPYNDHYGHGAGDECLRRVARVLANVPSRTTDLVARYG 221 Query: 290 GDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNPQM--SH 344 G+EF ++ T A A R + L+LP+ T + +SVGVA Sbjct: 222 GEEFIALLPYTDAPDAWQMAERFRAAVAALQLPHGHSSTDGIITMSVGVASHTADRPYDS 281 Query: 345 YREWLKSADLALYKAKKAGRNRTEVA 370 + L++AD ALY AKKAGRNR + A Sbjct: 282 PEQLLEAADQALYAAKKAGRNRVQAA 307 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 127/262 (48%), Gaps = 11/262 (4%) Query: 119 NVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAP--LEWWL 176 + L ++ + + G +L L+ + + ++ + A Sbjct: 299 SSLTYALIVFMWISIRICKKGDKLIKIFLIAHTLYLIFSVYALLYYLGIADANYISSHGT 358 Query: 177 SLPIIVIYPLLFGWVSYQ------TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRN 230 S+ +I+ LL VSY+ + + L+++++ D MT +YNRR++ + Sbjct: 359 SIGLIIEAMLLSYLVSYKFIIMEQEKEEEKLKQIELKLLASTDSMTKLYNRRYFTEISAK 418 Query: 231 EFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGG 290 +R + ++L+IDID FK +NDT+GH GDE ++AL+R L R SD++ R+GG Sbjct: 419 VLHLSKREKNNLSILMIDIDRFKVVNDTYGHQFGDEVLIALSRLLVEHQRKSDIVCRYGG 478 Query: 291 DEFAVIMSGTPAESAITAMLRVHEGLNTLRL--PNTPQVTLRISVGVAPLN-PQMSHYRE 347 +EF +++ T + A ++ + +L + P + IS+GVA ++ + Sbjct: 479 EEFVILLPNTSLKDATNIAQKIRILVESLTMEAPTNKEFKFTISIGVAQIDVEHEDDIKF 538 Query: 348 WLKSADLALYKAKKAGRNRTEV 369 LK AD ALY+AK +GRNR Sbjct: 539 ALKRADDALYRAKNSGRNRVCA 560 >UniRef50_Q04S93 GGDEF domain receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04S93_LEPBJ Length = 330 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 19/204 (9%) Query: 182 VIYPLLFGWVSYQTATKLAEHKRRLQVM--------------STRDGMTGVYNRRHWETM 227 ++ + ++ T+ E ++ L+ + S D +TG+YNRR++ + Sbjct: 119 LLARVRSALRLFEEMTRRKEREKELEKLTDQLQEVNSYLVAISRTDSLTGLYNRRYFYEI 178 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIG 286 L E+ C R L+++DIDHFK NDT+GH GD+ + + R ++ R DV Sbjct: 179 LTTEWKRCWRTGAGIALIMLDIDHFKLYNDTYGHQGGDQCLKQVARAIRDCARRAGDVAA 238 Query: 287 RFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNPQ-M 342 R+GG+EFAVI+ T +A+ + E + + +P++ T + +S+G+A L+P Sbjct: 239 RYGGEEFAVILPETNESNAVVVSRNILENVEKMAIPHSASKTNSIVTVSIGMATLSPSPE 298 Query: 343 SHYREWLKSADLALYKAKKAGRNR 366 + E ++ AD ALY AK+ GRN Sbjct: 299 NSITELIERADKALYLAKEEGRNC 322 >UniRef50_C0QLY1 Two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLY1_DESAH Length = 440 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 2/180 (1%) Query: 189 GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 + TK ++ L+ ++T D +TG NRR + + E +R+N L++ID Sbjct: 257 AIAIIEDITKRKTMEKELEKLATTDPLTGAKNRRSFLNLFEKEMKRSKRYNYTLALVMID 316 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 IDHFK IND +GH+ GD+ + L + LR SD+ R+GG+EF +++ T A +A Sbjct: 317 IDHFKKINDNFGHETGDKILNLLVAKCHSVLRDSDIFARWGGEEFIILLPETDLLQASSA 376 Query: 309 MLRVHEGLN--TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R+ L LR + + +S+G + E +K AD ALY AKK GRNR Sbjct: 377 AERLRGALAQSELRTNDGTNINFTVSIGFTIFGNKNILIDEIIKKADKALYLAKKQGRNR 436 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 8/227 (3%) Query: 150 MVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSY----QTATKLAEHKRR 205 +V+ + +L G+ ++ + WL I ++ + + +L Sbjct: 1068 LVLPVVAFDQLWGLLIAHDCHQPRKWLDHEITLLSQITITAAIAIHQGELHQQLQNANLE 1127 Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ +S DG+T V NR ++ L E+ R +L++ D+DHFK NDT+GH GD Sbjct: 1128 LKKLSAIDGLTQVANRHRFDVYLEQEWRRLMRSRHSLSLILSDVDHFKWYNDTYGHLAGD 1187 Query: 266 EAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 + + R ++ ++ R +D++ R+GG+EFA+++ T + A+ ++ + + L +P+T Sbjct: 1188 HCLQQIARVIKTSVGRPADLVARYGGEEFAIVLPETSLKGALFVAEQIRQKVKNLTIPHT 1247 Query: 325 PQVT--LRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTE 368 + +S+GVA L P + + + +AD ALY+AK GR+R Sbjct: 1248 KSAYQCVTLSLGVASLIPSGALSPKALINAADEALYQAKANGRDRVV 1294 Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 11/184 (5%) Query: 187 LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 L+ ++ Q T L + ++ D +T + N + L + + +LI Sbjct: 411 LYMILTQQRLTHL------IHHQASYDPITQLPNWIIFNHRLALALVDATHGSNMLGVLI 464 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG----SDVIGRFGGDEFAVIMSG-TP 301 ID++ FK IND+ GH VGD + + +LQ L ++ R+ G F V++S Sbjct: 465 IDLNQFKRINDSLGHGVGDYLLQKASDRLQNCLESYSFLEPLLARWHGAGFIVLLSQLAY 524 Query: 302 AESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKK 361 + AI ++ + + L +S+G+A LK+A+ A+Y+AK+ Sbjct: 525 VDEAINFSQKLLNDFQEPFYVQSQAIYLGVSIGIALAPYDGDSSEVLLKNAESAMYQAKQ 584 Query: 362 AGRN 365 G+N Sbjct: 585 QGKN 588 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 2/258 (0%) Query: 114 GVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLE 173 +M V ++ L+ L+ G + + + Sbjct: 208 PLMTVYMVSLAVFAQASLAFLLATPWNHLWWLGHGIFAAGFFMLSYGIVQAFHTTRSFST 267 Query: 174 WWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFD 233 + + ++ W + + ++ E R+L+ +++ D +TGV NRR E Sbjct: 268 VYSQMDMMAQLREQQAW-TQEALLQVQEANRKLEQLASTDALTGVANRRQLVERADMEVP 326 Query: 234 NCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEF 293 RH +LL +D+DHFK IND +GH GDE + + +Q +LR SD++ R GG+EF Sbjct: 327 RSERHGAPLSLLCLDLDHFKRINDDYGHLAGDEVLKQVAEAIQQSLRPSDLLARVGGEEF 386 Query: 294 AVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV-TLRISVGVAPLNPQMSHYREWLKSA 352 V++ T A R+ L L +P V + +SVG A L P + + +A Sbjct: 387 HVLLPDTDLAGARDVAERIRVKLEGLDIPVQGVVLHVTVSVGCAQLGPDGADMKSLTHTA 446 Query: 353 DLALYKAKKAGRNRTEVA 370 D LY+AK GRNR +A Sbjct: 447 DERLYQAKALGRNRVVIA 464 >UniRef50_Q2IF81 Response regulator receiver modulated diguanylate cyclase n=4 Tax=Anaeromyxobacter RepID=Q2IF81_ANADE Length = 351 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 21/291 (7%) Query: 95 LSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIM--------CLNLMGAGGPRLFVAG 146 L RE Y+++T A V G P +L ++ L ++ A F+ Sbjct: 53 LEREEYDVRTAADGKDAIRKVRGEP--PDLVLLDMILPDMDGLEVLRIVKARPEDQFIPV 110 Query: 147 LVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRL 206 ++L V S L + ++ G+ + + + + I+ + + Q +L E +RRL Sbjct: 111 IILSVKSDLDS-KVAGLRIGADDFLAKPFAEAEILARCAAMLRIKTLQD--QLRETQRRL 167 Query: 207 QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDE 266 + + D +TG+ NRR ++ L+ EF R++ +L++ID+DHFK +ND +GH GD Sbjct: 168 REQTLTDDLTGLKNRRAFDERLQEEFRRAHRYSDPVSLIMIDLDHFKLVNDRYGHPFGDL 227 Query: 267 AIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN--- 323 + + QL+ + R D+ R+GG+EFAVI+ T A+ R+ + L+ P Sbjct: 228 VLRGASEQLRASTRDPDICARYGGEEFAVILPKTHLSGALAVAERIWKELSARSYPVPAG 287 Query: 324 ----TPQVTLRISVGVAPLN-PQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + S+G+A + ++ AD ALY+AKKAGRN + Sbjct: 288 SAEPDTAIQVTASMGIAFYPSKDIGSPEALVRYADEALYQAKKAGRNTICL 338 >UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIF2_SYNFM Length = 352 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 66/177 (37%), Positives = 100/177 (56%), Gaps = 5/177 (2%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 KL E R+L+ ++T DG+T V NRR + L E+ RR L++ DIDHFK ND Sbjct: 171 KLRELNRKLERLATLDGLTRVANRRSLDRFLDLEWRRTRRERAPMALILSDIDHFKLYND 230 Query: 258 TWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 T+GH GD+ + A+ ++ R D++ R+GG+EFAV++ T A+ A+ + + Sbjct: 231 TYGHLAGDDCLRAVATAIKECAKRPMDLVARYGGEEFAVVLPNTNADGAVHIAETICREV 290 Query: 317 NTLRLPNTPQVT---LRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRTEV 369 LR+ + T L +S GVA + P + S + +AD ALY+AKK GRNR + Sbjct: 291 ENLRVRHPESSTGEFLTLSCGVAAMVPREESTPEALVAAADEALYEAKKQGRNRVVL 347 >UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N492_9GAMM Length = 509 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 4/180 (2%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + T+ + + LQ MS DG+TG+ NRR ++ L +E+ R+ + ++++DID FK Sbjct: 325 EDITEKMKLQSLLQEMSYMDGLTGIANRRRFDDFLTHEWYRAARYAKPLAIIMMDIDFFK 384 Query: 254 SINDTWGHDVGDEAIVALTRQLQIT-LRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 ND+ GH GD+A+ + L+ LR +D++ R+GG+EF I+ T A + Sbjct: 385 RYNDSLGHLAGDDALKRVVHALKSRVLRRTDLLARYGGEEFICILPDTNVIDATLFAETL 444 Query: 313 HEGLNTLRLPNTP---QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + L+LP+ + ISVGVA P+ L AD ALY+AK GRNR EV Sbjct: 445 RQAVCALQLPHPDSNISSFVTISVGVACCTPREGEPSNLLGLADEALYRAKTLGRNRVEV 504 >UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales RepID=B4RZE8_ALTMD Length = 325 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 3/189 (1%) Query: 184 YPLLFGWVSYQTATKL--AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 + +L V+ Q KL + L+ S DG+TG++NRR+W+ + C R ++ Sbjct: 131 FCMLVYDVTEQALGKLGMEHLNQELKTASRVDGLTGLFNRRYWQERFDEMYKLCVRRDKP 190 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 +T +++DIDHFK INDT+GH GD+ I L ++ +R +D+ GR+GG+EFA+I++ + Sbjct: 191 STAVMLDIDHFKRINDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDST 250 Query: 302 AESAITAMLRVHEGLNTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 E A R+ + L + + + + +S+G+A WL+ AD ALY AK Sbjct: 251 VEDARIVAERIRQLAQRLVVEHEGESINFTVSLGLAQFCSAFKGPLAWLECADKALYDAK 310 Query: 361 KAGRNRTEV 369 ++GRN+ V Sbjct: 311 ESGRNQYRV 319 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 2/179 (1%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 + +R L+ ++T D +TG +NRRH+ E + R+ TLL++D+D+F Sbjct: 394 LTDISDRKAMERELRRLATTDSLTGAFNRRHFLAAAGTELERANRYGNPLTLLMLDVDYF 453 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 KSIND GH GD+A+ L L+ LR DVIGR GG+EFAV++ T A+ R+ Sbjct: 454 KSINDAHGHGTGDDALRRLVEGLRHALRDIDVIGRLGGEEFAVLLPETGMAGALITAERL 513 Query: 313 HEGLNTLR--LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + LR LP+ Q+ +S+G+A + L AD ALY+AK GRNR Sbjct: 514 RAQVADLRLDLPDGGQLAFTVSIGIAAPRAEDGSVEAVLARADKALYRAKDEGRNRVCA 572 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 57/202 (28%), Positives = 109/202 (53%), Gaps = 3/202 (1%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 N + +S I++ + T+ + + +++++T D +TG+ NRR + T Sbjct: 879 NGSIFLADISSAAIILDGRTIMVGFFHDVTERKKVEEEIKLLATTDSLTGIANRRAFSTH 938 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGR 287 L +E + R+ +L++ DID+FK +ND +GHD GD+ + AL+ ++ +R D++ R Sbjct: 939 LASELERSNRYGTPLSLVMFDIDYFKKVNDNFGHDAGDDVLQALSELVKRNIRAVDIVAR 998 Query: 288 FGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYRE 347 +GG+EF ++M + +A A+ ++ ++ P +L +S G+ + Sbjct: 999 WGGEEFMLLMPESDISAATAAIEKLRREISD--FPFGQVGSLTVSFGITVFVLNEDS-KV 1055 Query: 348 WLKSADLALYKAKKAGRNRTEV 369 +LK D ALY+AK+ GRNR E+ Sbjct: 1056 FLKRVDDALYQAKEKGRNRVEI 1077 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 64/178 (35%), Positives = 96/178 (53%), Gaps = 2/178 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 + + + L+ ++TRD +TGV NRR +L E + RR+NR LL ID DHFK Sbjct: 219 DISDRKQLENELEALATRDSLTGVLNRRECSRVLIEELERARRYNRPLALLWIDFDHFKE 278 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 INDTWGH GD + +++ L+ ++R D +GRFGG+EF +I+ A R+ + Sbjct: 279 INDTWGHAAGDSVLCSISSLLEDSVRSVDTLGRFGGEEFVLILPEMDVAEAEETAERLRQ 338 Query: 315 GL--NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + L + + L IS+GVA +AD A+Y+AKK GRN +A Sbjct: 339 RVCNQPVALESGHNIRLTISIGVAVFPDHGDTLDALCAAADKAMYRAKKQGRNCIAMA 396 >UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AV70_SYNWW Length = 459 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 99/176 (56%), Gaps = 3/176 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + +L E R LQV + D +TG+YN R L+ E R+ ++ T++++DIDHFK Sbjct: 287 EKNQQLRELNRILQVQAITDSLTGLYNHRQVLEKLQLEIARANRYQQELTIMMLDIDHFK 346 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 SIND +GH VGD +V + + ++ LR D+ GR+GG+EF +I+ T + R+ Sbjct: 347 SINDEFGHQVGDVVLVEVAQIIKRNLRNIDIAGRYGGEEFLIILPQTNLNNGRQVGERIR 406 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + ++ + + +S+G++ Q ++++ AD LY+AK+ GRNR E Sbjct: 407 RQVEIEGFEDSKEG-ITVSIGISQ--HQGEEMVDYIERADQLLYRAKRKGRNRIEC 459 >UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKY4_DICZE Length = 463 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 175 WLSLPIIVIYPLLFGWV---SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNE 231 W+ +P V S T+L + + LQV++ D +TG+ NRRH++ ++ Sbjct: 252 WIHTEASASHPGDGSIVFYGSMLDVTELKQSETLLQVLAQTDSLTGIANRRHFDERYQHL 311 Query: 232 FDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSD-VIGRFGG 290 + + +LL+IDID FK ND++GH GD I ++ L L S+ ++GR+GG Sbjct: 312 WRQQESMQKPLSLLMIDIDRFKRFNDSYGHSKGDACIKSVVETLAAQLPSSECLLGRYGG 371 Query: 291 DEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT--PQVTLRISVGVAPLNPQ--MSHYR 346 +EF +++ T A+ R + + ++ +P+T PQ + +S+GVA P S Sbjct: 372 EEFIMVLPETDHRQALILAERCRQAVESMEIPHTKSPQGVVTVSIGVAAAKPGETGSSMT 431 Query: 347 EWLKSADLALYKAKKAGRNRTEVA 370 + AD ALY+AK GRNR E + Sbjct: 432 QLSNDADQALYRAKHQGRNRVEAS 455 >UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZW4_HYPNA Length = 455 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 4/177 (2%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L + R +S D +TG++NRR+ L R N+ +L++ DIDHFK++NDT Sbjct: 279 LRQRVDRGLELSVIDQLTGLHNRRYMNGQLEQFMQRAARGNQPLSLMMTDIDHFKAVNDT 338 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 GH GD+ + + ++L+ +R +DV+ R GG+EF V+M TP + A A R+ + + Sbjct: 339 HGHQAGDDVLREIGKRLRANVRPTDVVCRTGGEEFVVLMPNTPGDLACAAAERIRKAVAA 398 Query: 319 LRLP---NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE-VAA 371 P + + + +S GV+ L + + AD ALY+AK GRNR E +AA Sbjct: 399 EEFPVLGGSQNLRITVSAGVSTLQGAGDTTDDLMHRADTALYQAKTGGRNRVESIAA 455 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 65/177 (36%), Positives = 92/177 (51%), Gaps = 1/177 (0%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 ++ + + L+ ++T DG+TG YNRR + + E R R +LL++DIDHF Sbjct: 224 FRDISARKRLESDLKHLATTDGLTGAYNRRSFVEVCGQELQRADRRARPTSLLLMDIDHF 283 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 K +ND +GH GDE + + + LR DV+GR GGDEFAV++ T E A ++ Sbjct: 284 KRLNDRFGHAAGDEVLRQIVETGRRVLRSEDVVGRIGGDEFAVLLPATTLEQAGRVAEQL 343 Query: 313 HEGLNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 L +P T +S GVA P + E L+ AD ALY AK AGRN Sbjct: 344 RTTYERLAVPARGGTATFTVSFGVAEWKPHLRTVEELLQRADRALYAAKNAGRNCVR 400 >UniRef50_B7GIF3 Response regulator with a diguanylate cyclase output domain n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GIF3_ANOFW Length = 421 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 3/181 (1%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 V + T L E +R + ++T+D +T +NR ++ E +R+ ++++ DI Sbjct: 243 LVVFTDITALEEESKRNEFLATKDPLTKTFNRLKFDEFFTREIHRAKRYKHTFSIILFDI 302 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 DHFK +NDT+GHDVGD +V + + LR D++ R+GG+EF ++ T A Sbjct: 303 DHFKKVNDTYGHDVGDLVLVRMCEAISNRLRDCDILARWGGEEFIILAPATSQTGAYRLA 362 Query: 310 LRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + T+ P + S GV Q + +K AD ALY+AK+ GRNR V Sbjct: 363 EALRHLVETVHFPTVG--HMTCSFGVCEY-EQGMTKEQMVKRADEALYEAKRTGRNRVVV 419 Query: 370 A 370 + Sbjct: 420 S 420 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 8/229 (3%) Query: 149 LMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEH----KR 204 ++ + V G+ + + E + + ++ V+ ++ E Sbjct: 263 VIALPFSVDRGQYGVFLVRRTREQELFGPADLEFAQAVITAAVAVIQRAQMVESTMADNA 322 Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 RL+ ++ D +T + NRR + E + R++ LL+ID+DHFK +NDT+GH VG Sbjct: 323 RLEQLAQTDPLTQLLNRRALTERITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHLVG 382 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 D+ + + + L T+RGSD+ R+GG+EF V++ T A+ R+ + Sbjct: 383 DDVLRDVGQLLGHTIRGSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFARD 442 Query: 325 ---PQVTLRISVGVAPLN-PQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + L S+GVA ++ + + AD ALY+AK GRNR + Sbjct: 443 SMAEPLKLTASIGVAVFPAARIENVEDLFARADAALYRAKAEGRNRVRM 491 >UniRef50_Q2BZB4 Putative uncharacterized protein n=2 Tax=Photobacterium RepID=Q2BZB4_9GAMM Length = 368 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 86/317 (27%), Positives = 153/317 (48%), Gaps = 12/317 (3%) Query: 63 HPPPGWWWLVLVGWAFVWPHLAWQIAS-RAVDPLSREIYNLKTDAVLAGMWVGVMGVNVL 121 W ++L G+ ++ + + + A+ R + IY L A + + V V + Sbjct: 55 LAAQFIWQMILSGFGIIYFNRSTEPANYRLISAFYSLIYGLSWGATILILGVYVQFTLLS 114 Query: 122 PSTAMLMIMCLNLMGAGGPR--LFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLP 179 A LM M L+G R L++A ++ +S +T+E +T+ F+ L + Sbjct: 115 EVLANLMTMVA-LLGFYTYRNALYLAVTPILALSTWITIEDEHLTLLFSFEKFMITL-II 172 Query: 180 IIVIYPLLFGWVSYQTATKLAEHK--RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRR 237 I +L+ W S + + + + L +++ D +T + NRR ++ L + N +R Sbjct: 173 IESGRRVLYRWFSNRVQQEHENKRLVKELNQLASHDQLTQIKNRRFFQIELEKQIKNTQR 232 Query: 238 HNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQIT-LRGSDVIGRFGGDEFAVI 296 + +L++IDIDHFK+ ND+ GH GDE + + + + + LRG D + RFGG+EF V+ Sbjct: 233 LHIPLSLVLIDIDHFKAFNDSQGHIAGDECLKLVAKVIDASLLRGIDSVSRFGGEEFVVL 292 Query: 297 MSGTPAESAITAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNPQMSHYREWLKSAD 353 + T + AI R+ E L + + + T + IS G+ ++++ AD Sbjct: 293 LPNTNLDGAILVAQRIQENLTKVAIDHPASQTSHIVTISQGITTYEESQRS-TQFIEKAD 351 Query: 354 LALYKAKKAGRNRTEVA 370 LY AKK+GRN A Sbjct: 352 HNLYDAKKSGRNCYIAA 368 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 2/170 (1%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + L + D +T + NR H+ E +R+ +D + ++DID FK IND+ GH Sbjct: 378 ELELNQKAHIDYLTELNNRGHFMEQAEKELSRSQRYQKDMAMFMMDIDFFKKINDSHGHK 437 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 +GD + L + TLR D+IGR GG+EFA+++ T A+ R+ + ++P Sbjct: 438 IGDIVLKKLADVCRQTLREVDIIGRIGGEEFAILLPETNRAEALEVAERLRLAVADSKVP 497 Query: 323 --NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + V +S+GV+ + + L AD ALY+AK++GRNR A Sbjct: 498 MKDGLPVQYTVSIGVSSVASADDNIDMLLSRADQALYQAKQSGRNRVCAA 547 >UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUF5_9AQUI Length = 283 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 4/166 (2%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 R L+ ++ D +TG YNRR E +L E + RR+ ++L ID+D+FK +NDT+GH Sbjct: 121 RELRFLADTDSLTGFYNRRKIEEILAKEIERSRRYGNPLSVLFIDVDNFKELNDTYGHKS 180 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 GDE + + ++ LR +D +GRFGG+EF VI+ T ++SA+ R+ + + Sbjct: 181 GDEVLRKIAEIIKSELRRTDYVGRFGGEEFMVILPETDSQSALRVAERIRKRVEREDFKT 240 Query: 324 TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + +SVGV L + D A+Y AK+ G+NR+E+ Sbjct: 241 G---KVTVSVGVTEL-KEGDDLNTLFNRVDRAMYLAKERGKNRSEL 282 >UniRef50_B8GR45 Diguanylate cyclase with PAS/PAC sensor n=27 Tax=Gammaproteobacteria RepID=B8GR45_THISH Length = 332 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 103/173 (59%), Gaps = 1/173 (0%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L + L +S D +T + NR WE L EF C+R+ ++L++ DIDHFK +NDT Sbjct: 144 LEKANEELACLSRTDRLTQLNNRGFWEECLGGEFARCKRYGTVSSLIMFDIDHFKKVNDT 203 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 +GH GDE I +++ L TLR +D+ GR+GG+EF VI++ T AE A R+ Sbjct: 204 YGHQAGDEVIRTVSQLLTKTLRDTDIAGRYGGEEFGVILTDTSAEKARVFADRLRRLNEA 263 Query: 319 LRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + + + IS+G+A +P M + +W+++AD ALY +K+ GRNR VA Sbjct: 264 VTVRHEDVAIRFTISLGIAQFDPAMERHSQWIEAADKALYLSKQGGRNRVTVA 316 >UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5G2_ACIC5 Length = 369 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 63/174 (36%), Positives = 98/174 (56%), Gaps = 3/174 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 ++ T+L E LQ M T D +TGV NRR ++ L+ + R +LL++D+DHFK Sbjct: 182 ESQTRLKEANACLQEMVTTDALTGVKNRRAFDEGLQQAWKMSARTKSPLSLLMVDVDHFK 241 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +NDT GH+ GD+ + + + LQ R +D++ R+GG+EF V++ GT AE A+ ++ Sbjct: 242 RVNDTLGHEAGDDVLRLVAQTLQFMTRSTDMVARYGGEEFVVVLPGTEAEPAVAFAEQLR 301 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + L P L +S+GV + E + AD ALY+AK +GRNR Sbjct: 302 LNIANLSWRGHP---LTVSIGVDSGSGSGKTECELVAHADAALYRAKNSGRNRV 352 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 10/187 (5%) Query: 189 GWVSYQTAT-------KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 ++++ T L L+ ++ D +TG++NR + L +E +R+ Sbjct: 244 AVIAFRDITVQKKNLQSLEGINELLEKQASTDALTGIFNRMKFNQTLTSEIKRAKRYRVA 303 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 +L++ DIDHFK +ND++GH GD + L R + LR D+ R+GG+EF + T Sbjct: 304 LSLILFDIDHFKQVNDSYGHLSGDTVLKHLARLVASNLREIDIFARWGGEEFVIQAPETS 363 Query: 302 AESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKK 361 ESAI ++ + P ++ +S GVA + + AD ALY+AK+ Sbjct: 364 LESAIKLAEKLRSKIENYVFPAPKKI--TVSFGVATFRSSDNDI-TLVNRADEALYRAKE 420 Query: 362 AGRNRTE 368 GRN+ Sbjct: 421 GGRNQVV 427 >UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geobacter RepID=C6E9C6_GEOSM Length = 713 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 5/196 (2%) Query: 178 LPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRR 237 L ++ + L + +T ++ E R + +S D +TG+YNRR + L E + R Sbjct: 483 LQVLTSFANLASLMIERT--EVLEESERFEQLSVTDALTGLYNRRFLKNRLEEELNRSIR 540 Query: 238 HNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIM 297 + T++ ID+D FK+ ND GH GD+A+ ++ +LR D++ R+GG+EF ++ Sbjct: 541 QGLNLTVIFIDLDFFKNYNDLCGHLAGDDALRITAEIIKASLRDMDIVARYGGEEFCAVL 600 Query: 298 SGTPAESAITAMLRVHEGLNTLRLPNT---PQVTLRISVGVAPLNPQMSHYREWLKSADL 354 GT A+ R+ + + P PQV L S+GVA + + ++D+ Sbjct: 601 PGTSKVEAMIVAERIRSEIEREKFPGESEIPQVRLTASLGVASFPEDGRTFTALVHASDV 660 Query: 355 ALYKAKKAGRNRTEVA 370 ALY+AK GRNR A Sbjct: 661 ALYEAKAGGRNRIVAA 676 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 1/192 (0%) Query: 180 IIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHN 239 ++V+ + + +L R L + ++ D +TG NRR + EF R+ Sbjct: 298 VLVLVVAGLSTLLVRGQIRLNRQSRELALAASTDMLTGALNRRAFMESASREFARVCRYG 357 Query: 240 RDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSG 299 + ++ID+DHFK++NDT+GH GD + + + LR D+ R+GG+EF +++ G Sbjct: 358 GHLSCIMIDLDHFKNVNDTYGHAAGDLVLSSSAHYIASRLREPDMFCRYGGEEFVILLPG 417 Query: 300 TPAESAITAMLRVHEGLNTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYK 358 T A T + GL L L + + L S GVA ++ Q + L AD ALY+ Sbjct: 418 TDRNGAATVAEELRAGLAGLDLQRGDEKLPLTASFGVAEIHAQCATLDTLLSLADQALYE 477 Query: 359 AKKAGRNRTEVA 370 AK+ GRNR +A Sbjct: 478 AKENGRNRVCLA 489 >UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece RepID=B1WQB8_CYAA5 Length = 493 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 99/180 (55%), Gaps = 5/180 (2%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L + ++L+ + DG+T ++NRR+++ +L E+ RR +L++ D+D+FK Sbjct: 308 QRTIELQQALKKLKALVNLDGLTQIFNRRYFDEVLYREWQRGRREKSVISLILCDVDYFK 367 Query: 254 SINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 N+T+GH GD + + + ++ + R SD++ R+GG+EF +++ T A+ + Sbjct: 368 IYNETYGHLGGDSCLQEVAQGIRRQVKRPSDLVARYGGEEFVILLPNTDLNGALALAEMI 427 Query: 313 HEGLNTLRLPNTPQV---TLRISVGVAP-LNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + +P+ + + IS+GV + + Y ++ AD ALY+AK+ GRN Sbjct: 428 RNAIEAMNIPHENSLVSDHVTISMGVTSKIPQETDEYEHLIEEADDALYQAKENGRNCVC 487 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 2/170 (1%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + L+ S RD +TG+YNRR+ E E +R + +LL+ID+DHFK NDT+G Sbjct: 374 RLRATLRQQSIRDPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHFKQHNDTYG 433 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H +GD + L LQ R D++ R+GG+EF V++ A A + + L Sbjct: 434 HALGDTLLRRLATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEALRRSVENLA 493 Query: 321 LPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + V L IS+G A + + L AD ALY+AK GRNR E Sbjct: 494 VTSNDAEFVALTISIGGASWPDHATTPEDLLARADAALYRAKHRGRNRVE 543 >UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTU2_DESBD Length = 339 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 4/182 (2%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 Q +L E RL +S DG+TG+ NRR ++ L E+ R L+++DIDHF Sbjct: 153 LQRTRELEEANHRLSELSLTDGLTGIANRRRFDAALAEEWSRSARTGSTLALIMLDIDHF 212 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 K ND +GH GD+ + + L+ + R D++ R+GG+EF +I+ T A R Sbjct: 213 KKYNDHYGHQQGDDCLRRVAEVLRSSARRQGDLVSRYGGEEFCMILPDTALPGAFEIAER 272 Query: 312 VHEGLNTLRLPN--TPQVTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRTE 368 + + + +P+ + + S+GVA P + E L+ AD +LY+AK GRN Sbjct: 273 LRREVENMDMPHVLSDVGRVTASMGVAASMPCKAMSPAELLRRADESLYQAKSEGRNCVR 332 Query: 369 VA 370 A Sbjct: 333 GA 334 >UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUF6_COMTE Length = 373 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 94/367 (25%), Positives = 151/367 (41%), Gaps = 35/367 (9%) Query: 29 EHQRSGLRFARRVRLPRAVGLAGMFLPIAST---LVSHPPPGWWWLVLVGWAFVWPHLAW 85 + + L+ R LP G G L ++ L + W + L A V Sbjct: 2 QVRTDQLQLLFRQSLPAPYGSVGGALALSWLQLDLGNRSVITPWLITLCLAAMV------ 55 Query: 86 QIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVN--VLPSTAMLMIMCLNLMGAGGPRLF 143 + D + + + T A G++ + V A L+ NL+ F Sbjct: 56 -RLALFRD-YNCRLASHLTIARWEGVYFATLVFTSGVWGVGAFLLTSSNNLLSQVITLFF 113 Query: 144 VAGLVLMVVSCLVTLELTGIT-VSFNSAPLEWWLSLP------IIVIYPLLFGWVSYQTA 196 G+ +S +T V P WL + ++ + L F + Sbjct: 114 AVGMAGSAISAYSAYRYMALTAVGLVLLPTTLWLLIQPSTEQRLLALTSLAFCAFVVRAT 173 Query: 197 TKLAEHKRRLQVM--------------STRDGMTGVYNRRHWETMLRNEFDNCRRHNRDA 242 +L+ + L + + D +TGV NRR + F RR+ Sbjct: 174 RELSRALQSLLRLRRELEIQHSIASNAARTDDLTGVNNRRAFNEKAETMFAYTRRYGVPL 233 Query: 243 TLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPA 302 L+ DIDHFK INDT GH GD+ + A+ RQ++ LR +D+ GR GG+EF V+++GT Sbjct: 234 CALLFDIDHFKQINDTHGHAAGDKVLQAVVRQIKSALREADLCGRLGGEEFGVLLAGTNM 293 Query: 303 ESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKK 361 + A+ R+ + ++ P N + + ISVGVA + + LK AD A+Y+AK Sbjct: 294 QEAVQIAERIRLAVQAIKEPVNDTTLQVTISVGVAEADSACADVSTLLKQADAAMYRAKS 353 Query: 362 AGRNRTE 368 GRN+ Sbjct: 354 NGRNQVH 360 >UniRef50_A0YVI7 Regulatory components of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVI7_9CYAN Length = 477 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 102/182 (56%), Gaps = 5/182 (2%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 ++ L E R+LQ ++ DG+T + NRR ++ L E+ C R + L++ D+D+F Sbjct: 277 HRMQIALEEANRKLQHLANIDGLTQIANRRSFDETLEQEWKRCFREQQPIALILCDVDYF 336 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 K+ ND +GH GDE ++ + + + + R +D++ R+GG+EF VI+ T A Sbjct: 337 KAYNDYYGHLQGDECLIQVAQAISQVIKRPADLVARYGGEEFVVILPNTDGSGARQVAQL 396 Query: 312 VHEGLNTLRLPNTP---QVTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRT 367 + + + L+ P+ + +S+G++ + P M+ + + +AD ALY+AK+ GR++ Sbjct: 397 IQDQIRQLQSPHVKSDVSSYITLSLGISSIIPSGMTSPEQLVNAADSALYQAKQQGRDQI 456 Query: 368 EV 369 V Sbjct: 457 VV 458 >UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VVS2_9CYAN Length = 314 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 103/180 (57%), Gaps = 4/180 (2%) Query: 194 QTATKLAEHKRR---LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 Q + EH++ L+ ++ D +TG++NRRH+ T+ EF+ R+ R ++L+IDID Sbjct: 134 QLNRLVKEHEKLANLLRKLAITDPLTGLWNRRHFLTVAYQEFNRASRYKRFMSILMIDID 193 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFK IND +GH +GDE + + + + +LR +D GRFGG+EF ++ T + A+ Sbjct: 194 HFKQINDEYGHTMGDEVLKGVAKSIVGSLREADYCGRFGGEEFVTLLPETDSSGAVRVAE 253 Query: 311 RVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 R+ + + + + QV + ++VGVA ++ ++ A+ ALY AK G NR + Sbjct: 254 RLRKRMEQITIGIGDKQVQMTVTVGVASYQLDDANIEVIIQRANKALYHAKSQGYNRVAL 313 >UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KB78_CYAP7 Length = 547 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 105/177 (59%), Gaps = 6/177 (3%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 KL + +RL+ + D +TG+YNRR+++ L E+ R +L+++DID+FK+ N Sbjct: 349 IKLTQENKRLRKLVYLDELTGIYNRRYFDHYLEREWRRMTREKAPLSLMLLDIDYFKNYN 408 Query: 257 DTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 DT+GH +GD + + + +Q +L R +D++ R+GG+EFA+I+S + A+ + E Sbjct: 409 DTYGHQLGDACLKKVAQAIQKSLKRSTDIVARYGGEEFAIIISQCDNKGALFLAEIIREQ 468 Query: 316 LNTLRLPN-TPQVT---LRISVGVAPLNPQMSH-YREWLKSADLALYKAKKAGRNRT 367 + +L + + QV + S+GVA + P + + ++ AD ALY++K GRNR Sbjct: 469 IKSLAINHKNSQVNLKIVTASIGVATIIPALETQPKMLIQMADEALYQSKHEGRNRV 525 >UniRef50_A0YNV2 Regulatory component of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YNV2_9CYAN Length = 456 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 9/242 (3%) Query: 137 AGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTA 196 G +F + L + + T + + + + W S+ I + V T Sbjct: 211 KGSLDIFDSSLFEYFIKVVKTRHPFERDLYYETPEITAWYSVKAIPYGQGILIIVRDITE 270 Query: 197 TK-----LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 K L E L + D +T + NRR ++ L+ E+ +R L++IDID+ Sbjct: 271 RKQCELVLHETNSILYQQAITDNLTKISNRRAFDVYLKQEWKRAKREALSLALMMIDIDY 330 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 FK ND +GH+ GD + + + ++ + R SD + R+GG+EFAVI+ T E A T Sbjct: 331 FKRYNDHYGHEAGDRCLYTVAQTIRQAVKRPSDFVARYGGEEFAVILPNTEREGAETVAD 390 Query: 311 RVHEGLNTLRLPNTP---QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + + ++ +LP+ + +S+G++ P + +++AD ALY+AK GR+R Sbjct: 391 SIQKAIHDFKLPHAQSPISSCITLSIGISIQIPTSEDFTILIQTADHALYEAKHQGRDRI 450 Query: 368 EV 369 +V Sbjct: 451 QV 452 >UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P7Y3_AZOSE Length = 313 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 2/187 (1%) Query: 187 LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 L + T+ + L+ ++T D +TG+ NRR + + E R TL++ Sbjct: 125 LSFIGIIRDITERKRLEAELRQLATTDPLTGILNRRRFTELTTQEIHRAHRLRHPLTLIM 184 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAI 306 +DID FK IND +GH VGD I +L LR D++GR GG+EFAV++ A ++ Sbjct: 185 LDIDWFKRINDAFGHTVGDRVIQSLASACASELREIDILGRLGGEEFAVVLPELGASGSL 244 Query: 307 TAMLRVHEGLNTLRLP--NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 R+ + + L++ + V S+GVA L L AD ALY+AK+ GR Sbjct: 245 EVAERLRQKVEGLQITLNDGRIVRFTCSLGVAVLKDTDQSPDTLLVRADNALYRAKRDGR 304 Query: 365 NRTEVAA 371 N A+ Sbjct: 305 NCVRAAS 311 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 12/203 (5%) Query: 179 PIIVIYPLLFGWVSYQTATKLAEH----------KRRLQVMSTRDGMTGVYNRRHWETML 228 + P V Q A ++EH + L+ S +D +T +YNRR+ E L Sbjct: 870 YLSASEPDKLSEVKQQLARAVSEHISLALVNLQLRESLKAQSIKDSLTDLYNRRYMEESL 929 Query: 229 RNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRF 288 + E +R L++ID+DHFK NDT+GH GD + ++ L I +R D+ R+ Sbjct: 930 KREISLAQRKQHSVGLIMIDVDHFKEFNDTFGHKAGDLVLQEVSNFLMINVRSGDIACRY 989 Query: 289 GGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV--TLRISVGVAPLNPQMSHYR 346 GG+EF +I+ + ++ +G+ L Q ++ +SVGVA ++ Sbjct: 990 GGEEFLLILPEASLTDSQQRAEQIRQGIKQLDFKRYDQSFRSVTVSVGVASFPDHGTNND 1049 Query: 347 EWLKSADLALYKAKKAGRNRTEV 369 + +++AD ALY+AKK GR+R V Sbjct: 1050 QLIQAADTALYQAKKQGRDRVVV 1072 >UniRef50_Q0VQ38 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VQ38_ALCBS Length = 364 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 89/355 (25%), Positives = 153/355 (43%), Gaps = 23/355 (6%) Query: 31 QRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASR 90 + A G + +A+ + P L+++ F + + I+ + Sbjct: 17 RLKRQLMAFYSYCLLWAGTFIG-VELAAFEPNTPTLALLALIVIINVFFYLLIRTGISEQ 75 Query: 91 AVDPLSREIYNLKTDAVLAGMWV--GVMGVN------VLPSTAMLMIMCLNLMGAGGPRL 142 DP +L + AG+ + ++ + +L M+M + + L Sbjct: 76 FRDP------SLTIVQMAAGILLTTAILHYSRELRGAMLSIYFMVMTFGVLALDRRRMLL 129 Query: 143 FVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEH 202 A L S L+ + S + WL L + + + + G + +++ E Sbjct: 130 IAAFTQLCFTSLLIYEWFEAPQQAIFSYLVGHWLILALGLGWFIYMGGYIHNLQSRVREQ 189 Query: 203 KRRLQV-------MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 +RRL ++ RD +TG+YNRRH+ L E R N L IID+DHFK + Sbjct: 190 RRRLHEAHNRLSAIAVRDDLTGLYNRRHFLERLEEEMSRANRENNPLHLAIIDLDHFKQV 249 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH GD+ + + + LR SD++ R+GG+EF V+ T ++ AM R+ Sbjct: 250 NDTYGHHAGDDVLHRFAQLAAMGLRKSDLLARYGGEEFVVLFPHTSTQACQAAMERLRNR 309 Query: 316 LNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + + S G+ P P E++K AD ALY+AK GRNR ++A Sbjct: 310 FAQQHYSFSGDLRSKFSAGLTPYQP-GESAEEFIKRADRALYQAKDLGRNRIQLA 363 >UniRef50_B4U5K2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5K2_HYDS0 Length = 901 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 3/183 (1%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 Q T+ + + + +S +D +TG+ NRR E L +R+NR ++++ Sbjct: 722 LILCILQDITEESMIIKYFEELSIKDDLTGICNRRCLEDKLEEYLTLAKRYNRPLSVIMF 781 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DID FK IND++GHD+GD+ + + + +R +D++ R+GG+EF +I T E A Sbjct: 782 DIDFFKHINDSYGHDIGDKVLKTIANIVLSNIRATDILARYGGEEFVIISPETTLEDAKA 841 Query: 308 AMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 ++ + + ++ S GV LN Q LK D ALYKAK+ GRNR Sbjct: 842 LAEKLRKEIENFLFEEG--FSITCSFGVTSLN-QEDTKETILKRVDEALYKAKREGRNRV 898 Query: 368 EVA 370 + Sbjct: 899 VAS 901 >UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZS4_DESAD Length = 635 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 16/224 (7%) Query: 160 LTGITVSFNSAPLEWWLSLPII--------------VIYPLLFGWVSYQTATKLAEHKRR 205 L + + E W+ LP++ V+ ++ T+ E Sbjct: 406 LIDSAFAGQTTGFEAWVDLPLVGKRFFSVTYHPVDSVVGDGRLVSITAHDITEQKEMLEE 465 Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 ++ +++ D +TG +NRRH+ + E D R+ + L+++DIDHFK+INDT+GH VGD Sbjct: 466 VKRLASTDYLTGAHNRRHFMSRAETELDRLTRYGGELYLMMLDIDHFKNINDTYGHSVGD 525 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP 325 + + + TLR SDV GR GG+EFA ++ +SAI R+ E + + + Sbjct: 526 VVLKEMVKCCIETLRTSDVFGRLGGEEFAALLVHGSIDSAIQVAERLREAIEDMEVRIGR 585 Query: 326 Q-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 V L +S+G+ + LK AD LY+AK+ GRNR Sbjct: 586 HVVKLTVSIGLTMVCAD-EDIEIALKHADKCLYQAKEQGRNRVV 628 >UniRef50_A8L354 Serine/threonine protein kinase n=1 Tax=Frankia sp. EAN1pec RepID=A8L354_FRASN Length = 1726 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 8/244 (3%) Query: 128 MIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLL 187 ++ + +M GG R + M+ T L GI + + +SL ++Y L Sbjct: 1479 SLLAVPIMIRGGLRAMLLLENRMIRGAFATERLEGIMLIAG----QLAVSLDNALVYASL 1534 Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 V+ +T +LA RRL+ +S D +TG+ NRR E +L E+ R H+ L +I Sbjct: 1535 ERKVAERT-QQLAAANRRLEQLSRTDSLTGLANRRRLEEVLDAEWHRARLHSTPIALAMI 1593 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DIDHFK ND +GH GD + + L +LR + + RFGG+EFAV+M T AE+A+ Sbjct: 1594 DIDHFKLYNDHFGHTAGDRCLQRVAAGLAASLRPTHMAARFGGEEFAVVMPDTGAETAVE 1653 Query: 308 AMLRVHEGLNTLRLPNTPQVT--LRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGR 364 ++ + L P+ + + +S+GVA P +++ AD+ LY+AK+ GR Sbjct: 1654 LARQLRRAVAGLAEPHPLVIHRIVTVSIGVAATIPDPGDEVAAFVERADIELYRAKRGGR 1713 Query: 365 NRTE 368 +R E Sbjct: 1714 DRVE 1717 >UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTU0_9FIRM Length = 491 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 5/188 (2%) Query: 187 LFGWVSYQTATKLAEHKR--RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 L ++ Q + +A R+++ + DG+TG+YN R+++T+ EF R+ R +L Sbjct: 296 LLRSLASQISMTIAHANHVSRVELQAITDGLTGLYNYRYFQTLFEREFKRAVRYKRPLSL 355 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 L+IDID+FK NDT+GH GD I + + ++ R D++ R+GG+EFAV+ T + Sbjct: 356 LMIDIDYFKLYNDTYGHRQGDHIIRTIAKIIRQNCRDVDIVVRYGGEEFAVLFPETTVDE 415 Query: 305 AITAMLRVHEGLNTLRLPN---TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKK 361 A R+ + N P L +S+GVA E + AD+ALY+AK+ Sbjct: 416 AFKIAERIRMAVAEYPFANKHSQPGGILTVSMGVAGYPYDAQSETELIDHADMALYRAKR 475 Query: 362 AGRNRTEV 369 +NR + Sbjct: 476 TSKNRVCL 483 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 77/415 (18%), Positives = 149/415 (35%), Gaps = 71/415 (17%) Query: 4 KIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLV-- 61 K+ +DEN ++A A G VG+ + L Sbjct: 166 KVYDDENS-RRALAGGHLDIAL--------------------MVGMMLALVFYNGLLYFA 204 Query: 62 SHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPL-------------------------- 95 + ++ + + VW L++ + ++A + Sbjct: 205 TSKKENIYYSLYLISGLVWIALSYGLVAKAFNAYGDAVFVLNLSLITMPIFLLLFMMAIF 264 Query: 96 ------SREIY------NLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLF 143 E L + G++ + S A LM++ + R Sbjct: 265 ETHEYFRTEHRVLQGMLALLVVTFVYGLFDIATALKPASSLAALMMVVTFSVSISLFRKG 324 Query: 144 VAGLVLMVVSCLVTLELTGITVSFNSAPLE--------WWLSLPIIVIYPLLFGWVSYQT 195 + +V + G V + ++ + + + + + Sbjct: 325 HPLVKFFLVGHTFFVVFNGFAVLYYKGLVQPNYINSHGVGIGIVLEALTLAFIISYRIKV 384 Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 + + L+ ++ D +T ++NRR++ + R +++ IDIDHFK++ Sbjct: 385 LEDIRSKQDELKRQASTDPLTRLFNRRYFMAEGEYVLEQARTSGEPLSVIAIDIDHFKAV 444 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT GH+VGD +V + + R D++ RFGG+EF +++ G R+ Sbjct: 445 NDTHGHNVGDLVLVEVASVFRQFSRDRDLVARFGGEEFVILLPGADLTEGFGCAERIRNA 504 Query: 316 LNTLRLPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + + V + +SVGVA +NP + +K AD +LY+AK GRNR Sbjct: 505 VEAMVIDGGDGLAVRVTVSVGVAEVNPLLESVEGAVKRADRSLYEAKAGGRNRVC 559 >UniRef50_A7N081 Putative uncharacterized protein n=6 Tax=Vibrio RepID=A7N081_VIBHB Length = 354 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 5/204 (2%) Query: 171 PLEWWLSLPIIVIYPLLFG--WV--SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWET 226 P E W I + L G WV S + TK ++RL+ +S D +TGV NRR + T Sbjct: 129 PEETWFEAIIKPVEDLQSGENWVIWSVRDVTKTHLLEKRLKELSETDELTGVLNRRAFLT 188 Query: 227 MLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIG 286 L + R ++ + ++IDIDHFK IND GH GD+ I + + Q +RGSD IG Sbjct: 189 RLDKAMSSHLRPSQTLSCIMIDIDHFKEINDQVGHFSGDQVIHHVAKICQRAIRGSDFIG 248 Query: 287 RFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHY 345 R GG+EFAVI+ T A A R+ E + + +++ +S+GVA + Q+S Sbjct: 249 RLGGEEFAVILVNTSAIQAYDVAERIREAIQNAPCKVDGIEISTTVSIGVAEYDEQVSST 308 Query: 346 REWLKSADLALYKAKKAGRNRTEV 369 E + +AD A+Y +K +GRN+ + Sbjct: 309 TELMVNADKAMYYSKHSGRNQVTL 332 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 64/180 (35%), Positives = 96/180 (53%), Gaps = 3/180 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T+ ++ L+ ++T D +TG+ NRR + R E + RH+R ++++ID+DHFKS Sbjct: 282 DVTESHRLRQELERLATTDPLTGLSNRRAFLMRAREEVERAVRHDRPMSVVMIDVDHFKS 341 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGS-DVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +ND +GHD+GD + + +Q LR S DV RFGG+EF +++ T A R+ Sbjct: 342 VNDRYGHDIGDLVLQDVAATVQGALRNSGDVAARFGGEEFVLLLPETTVSGAQQLAERIR 401 Query: 314 EGLNTLRLP-NTPQVTLRISVGVAPLNPQMSH-YREWLKSADLALYKAKKAGRNRTEVAA 371 + V S GV M LK AD ALY+AK+AGRNR ++AA Sbjct: 402 VAFERTAVETEQGAVRFTASFGVDVFRSDMDTGIDTVLKRADDALYRAKEAGRNRVQLAA 461 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 4/178 (2%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 +L L+ +S DG+T V NR ++ L E+ R + +L++ D+DHFK N Sbjct: 1083 QQLESANLELKKLSCLDGLTQVANRHRFDMYLDQEWRRLMRSQQFLSLILCDVDHFKGYN 1142 Query: 257 DTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 DT+GH GD+ + + + ++ + R +D++ R+GG+EFA+I+ TP A+ ++ + Sbjct: 1143 DTYGHLAGDQCLQQVAQVIKNAVGRPADLVARYGGEEFAIILPDTPLRGALYVAEQIRQQ 1202 Query: 316 LNTLRLPNTPQVT--LRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTEVA 370 + L +P+ + +S GVA P + + + +AD ALY+AK GRN+ + Sbjct: 1203 VQYLTIPHPQSTHQWVTLSSGVASFIPSAALSPKALINAADEALYQAKANGRNQVVFS 1260 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 11/184 (5%) Query: 187 LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 L+ V Q T+L ++ ++ D +T + N + L + ++I Sbjct: 397 LYMIVIQQRLTRL------IRHQASYDVITQLPNGIIFNHRLSLALVDAVNQGNMLGVVI 450 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDV----IGRFGGDEFAVIMSGTP- 301 +D++ FK IND+ GH VGD + + +LQ L + + R+ G F +++S Sbjct: 451 LDLNQFKRINDSLGHGVGDFLLTKVRDRLQNALDTYSIFNPLLARWHGARFIILLSKLSY 510 Query: 302 AESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKK 361 ++ ++ ++ + + L S+G+A LK+A+ A+Y+AKK Sbjct: 511 SDESVMVCQKLLNDFQEPFYVQSQAIYLGASLGIALAPYDGDTAEILLKNAESAMYEAKK 570 Query: 362 AGRN 365 G+N Sbjct: 571 QGKN 574 >UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6S3_9GAMM Length = 299 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%) Query: 166 SFNSAPLEWWLSLPIIVIYP----LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNR 221 +++ E+WL L I ++ + + T+ + +L+ +S D +TG+ NR Sbjct: 89 NYSKTGKEYWLDLSITPLFNDQGEVTHIVSIQRDVTEYIYTQNKLEELSRTDPLTGLINR 148 Query: 222 RHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG 281 R ++ M EF + N +LL +DID+FK IND +GH GD + + + + +R Sbjct: 149 RVFDEMAEKEFYRYQNQNIHYSLLALDIDYFKRINDKYGHLTGDYVLASFSTLCEKNIRS 208 Query: 282 SDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL-PNTPQVTLRISVGVAPLNP 340 D I R GG+EF +I+ T AI ++ ++ R + ++ + +S+GV+ + Sbjct: 209 QDKIARIGGEEFCIILPATDKVGAIEVAEKLRRAISNARFKQDEHEIAVTVSIGVSQVKM 268 Query: 341 QMSHYREWLKSADLALYKAKKAGRNRT 367 Y LK AD LY+AK GRN+ Sbjct: 269 SDYDYVAMLKRADENLYRAKHQGRNQV 295 >UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLA2_9GAMM Length = 811 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 63/179 (35%), Positives = 101/179 (56%), Gaps = 5/179 (2%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 +VS + E L ++T D +T + NRR + T L E +R++R+ +L ++D+ Sbjct: 623 FVSLLIEEQQTEAN--LHRLATTDELTSLANRRKFLTTLEAELARAKRYHRELSLCMLDL 680 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 DHFK IND GH GD +V + + ++ LR SD+ GR GG+EFA+++ T + A+ Sbjct: 681 DHFKRINDDNGHSAGDSVLVEVAKIMEAMLRESDMAGRIGGEEFAILLPDTSEDDALILA 740 Query: 310 LRVHEGLNTLRLP-NTPQVTLRISVGVAPLN--PQMSHYREWLKSADLALYKAKKAGRN 365 R+ E + +L + + L S+GVA LN P++ E L +AD +Y AK+ GRN Sbjct: 741 ERLREAIESLEIKYQAHTLKLTTSIGVASLNQMPEIVQASELLSAADDCMYYAKQNGRN 799 >UniRef50_D1U6K0 Diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U6K0_9DELT Length = 457 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 67/183 (36%), Positives = 97/183 (53%), Gaps = 1/183 (0%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 F Q T+ + ++ L ++S +D +T V NRR + E +R + +LII Sbjct: 125 FFISQIQDITRRKQAEQELLLVSQQDPLTKVANRRFFMEHATRELTRGKRFHEPQAILII 184 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DIDHFK+IND GHDVGDE + A+ LR DV GR GG+EFA ++ T A Sbjct: 185 DIDHFKTINDKHGHDVGDEVLKAMATACSKALREVDVFGRIGGEEFAAMLLNTNDSVARI 244 Query: 308 AMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 RV E + L + ++ IS+G+ + + +K AD ALY+AK++GRNR Sbjct: 245 VAERVRESVERLSVNVGGKEIPFTISIGLVSFLGGSNTLDDRMKMADKALYRAKESGRNR 304 Query: 367 TEV 369 EV Sbjct: 305 VEV 307 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 62/167 (37%), Positives = 96/167 (57%), Gaps = 2/167 (1%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 ++Q + D +TG+ NRRH+ +L E + RR++ ++ +ID+DHFK INDT+GH Sbjct: 412 AQIQSQAITDNLTGLANRRHFLQVLHQEMERNRRYHTPVSIAMIDVDHFKQINDTFGHIA 471 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL-P 322 GD + + R+ + LR DV+ R+GG+EF +I+ T E A+ A R+ L T + Sbjct: 472 GDYVLREIARRCRQQLRDVDVLARYGGEEFGLILPETTYEQALKATERLRTVLATTPIMI 531 Query: 323 NTPQVTLRISVGVAPLNPQM-SHYREWLKSADLALYKAKKAGRNRTE 368 + Q+ IS+GVA +P + + AD ALY AK+ GRNR Sbjct: 532 DGRQINPTISIGVASFHPTVYPDPSSLIADADRALYLAKQQGRNRVC 578 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 7/229 (3%) Query: 147 LVLMVVSCLVTLELTGITVSFNSAPLEW----WLSLPIIVIYPLLFGWVSYQTA-TKLAE 201 L+ M + + P ++ WLS IV L S+ T E Sbjct: 158 LIAMFLLVSAFFIFRFFRSFYEVPPEDFMNAGWLSALAIVAGEFLVILSSFCTIWMASDE 217 Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 + L ++ D +TG+YNRR ++ EF +R +++ D+DHFK +ND +GH Sbjct: 218 LQDELSEIARIDPLTGLYNRRAFDECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGH 277 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 VGDE + L+ +R DV+ RFGG+EF +++ G E + ++ ++ Sbjct: 278 HVGDEVLRRFANTLKEHIRKHDVVARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQI 337 Query: 322 PNTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 V TL S GVA + + L AD ALY AKK GRNR Sbjct: 338 TIGDDVCLTLSASFGVAHYDSSDREWSAVLHRADNALYAAKKQGRNRVV 386 >UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VL34_ALCBS Length = 487 Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 9/221 (4%) Query: 156 VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTAT-KLAEHKRRLQVMSTRDG 214 + L +++ N + I I + ++ + +L E + L M+ D Sbjct: 268 IVWVLLAVSLVRNGDGSPRYFLSQIEDITAQVTAELTLREKQGELEELNQELASMARTDP 327 Query: 215 MTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQ 274 +TG+YNR LR EF C R + +++ +D+DHFK ND++GH GD A+ A+ Sbjct: 328 LTGLYNRLVLMEGLRQEFSRCERRSEPMSVIFMDVDHFKQYNDSYGHVEGDAALQAVAEA 387 Query: 275 LQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVG 334 L+ +R +DV+ R+GG+EF ++ ++ A R + + + P + +SVG Sbjct: 388 LRPVIRDTDVLARYGGEEFVALLPTANSQDAERVAERCRRAVAEISSLSRP---VSLSVG 444 Query: 335 VAPLN-----PQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 VA L + L +AD ALY AK AGRNR A Sbjct: 445 VATLRFGDEADETKSPESLLSAADRALYVAKGAGRNRVHTA 485 >UniRef50_C0QMB4 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic substrate binding component n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QMB4_DESAH Length = 404 Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 78/366 (21%), Positives = 153/366 (41%), Gaps = 31/366 (8%) Query: 35 LRFARRVRLPRAVG-------LAGMFLPIASTLVSHPPPGWW-------WLVLVGWAFVW 80 + F R+ PR V + F I +V + L+ + Sbjct: 1 MEFKRQRFTPRMVTDLRHRAFVGIGFYIITLVVVLTTSGYYLRYPQFSSQFFLLISGICF 60 Query: 81 PH-LAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLP------STAMLMIMCLN 133 + I L R ++ + +G + + + +LM++C Sbjct: 61 FRFVHHLIDRWIPLTLYRVSLAFFLGSICLTGLIWGIGFSKIILQEGEQNFHILMVICTI 120 Query: 134 LMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFG---- 189 + +GG +V L V + L + ++ + L + ++Y + Sbjct: 121 GLCSGGVVAYVPSFWLAVAFDIAILGPGIVAMAVGQIYSSLMILLVLYLVYMIFMALRGN 180 Query: 190 ---WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 W + + L E R ++++ RDG+TG+YNRR+++ E++ R+ ++++ Sbjct: 181 REYWNALENEFLLEEKTRAIELLGQRDGLTGLYNRRYFDDAFEYEWNRAIRNRTAISIVM 240 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESA 305 DID+FK +ND +GH GD + L+ + R +D++ R+GG+EF ++ E+ Sbjct: 241 CDIDYFKRVNDAFGHLAGDAYLRLTADVLKQVVRRETDIVARYGGEEFIFLIPDDSLENT 300 Query: 306 ITAMLRVHEGLNTLRLPNTPQ-VTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAG 363 + R+ + + L Q + +S+GVA L+P+ + +AD A+Y+AK G Sbjct: 301 VGLAERIRQMMENTALTFDGQIIRATVSLGVARLSPRPFEKKETIVSNADNAMYQAKSRG 360 Query: 364 RNRTEV 369 RNR Sbjct: 361 RNRVVA 366 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 101/182 (55%), Gaps = 1/182 (0%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 V + ++ E + RL M+ D +TG+YNRR + + R EF+ +R++ T+L++DI Sbjct: 337 LVLMRDVSERKEAESRLLQMAATDELTGLYNRRRFFELARGEFNRAKRYSSPMTILLLDI 396 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 D+FK IND +GHD GD A+ + + LR DV+ R GG+EF ++ T A Sbjct: 397 DYFKRINDEYGHDAGDTALRCIVSMIASQLRSLDVLARLGGEEFVALLPETHQFDAERIA 456 Query: 310 LRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 R+ + + + + + +S+GVA + +M E + AD A+Y+AK+ GRN+ Sbjct: 457 ERIRSEIESTAINLFETTLFVTVSIGVAGYSKEMQDVGELINRADEAMYRAKRDGRNQVC 516 Query: 369 VA 370 +A Sbjct: 517 LA 518 >UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7X2_9GAMM Length = 365 Score = 246 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 3/175 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + +L +L+ +++ D +T + NRR + +L EF+ R+ + +L+++DIDHFK Sbjct: 189 ERTLELKRANEKLEYLASTDPLTELVNRRRLDEVLEQEFERTSRYQGELSLILLDIDHFK 248 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 ++NDT GH VGDE I + + R SD GR+GG+EF ++ T ++A+ ++ Sbjct: 249 AVNDTRGHQVGDEVIAGVGNIAKQMSRKSDTAGRWGGEEFLIVAPQTSCDNAVAFAEKLR 308 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + V + S GVA L + LK AD ALY+AK GRNR E Sbjct: 309 LSIENTEFSSG--VRVSASFGVASL-ETGETIQLVLKRADEALYRAKHNGRNRVE 360 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 246 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 1/178 (0%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + T ++ L +T D +TG+ NRR + E R+ R +L++D+D FK Sbjct: 799 RDITDRKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLDLDRFK 858 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +ND +GH GD ++ + Q LR +D++GR GG+EFA ++ T + A+ A R+ Sbjct: 859 RVNDRFGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAAAERLR 918 Query: 314 EGLNTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + +P + Q + +S+G+A P + L+ AD ALY AK+AGRNR +A Sbjct: 919 RAVEEMDVPFSGQRLRCTVSIGLALRGPGDGALDDILRRADSALYAAKEAGRNRVMLA 976 >UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRN6_9GAMM Length = 504 Score = 246 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 12/224 (5%) Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMST 211 +S + ++ GIT + +L L L + + A++L +LQ M+ Sbjct: 287 MSFMSCEQVNGITDEARELLVMRYLQL-------LQHASEADRKASELERTAVQLQEMAR 339 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 RD +TG YNRR+++ ML F+ RH + +L +D+DHFK +ND +GH GD + + Sbjct: 340 RDPLTGAYNRRYFDEMLSQRFEAATRHQQPLSLGFLDLDHFKMVNDRYGHQAGDVVLAGV 399 Query: 272 TRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ--VTL 329 + + LRG D + R+GG+EF +++ T E A + R+ + T P+ + + Sbjct: 400 AKAISSRLRGDDFLARYGGEEFVLLLPNTNLELAQRILERIRAHIETEEHTVAPEHMIRI 459 Query: 330 RISVGVAPLNPQ---MSHYREWLKSADLALYKAKKAGRNRTEVA 370 +S G A + + +++AD ALY AK+ GRNR EVA Sbjct: 460 TLSAGAAAHMDGSRISNKLDDLIRAADRALYLAKRQGRNRVEVA 503 >UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BW86_DESAD Length = 555 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 106/200 (53%), Gaps = 7/200 (3%) Query: 176 LSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNC 235 +S P + L+ G+ + Q K+ + LQ + D +TG+ NRR+ D Sbjct: 344 VSHPPEEVTQLIDGFCAMQG--KVDRTVQELQKSAVTDQLTGLPNRRYLMKEGTRLVDIA 401 Query: 236 RRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAV 295 R + +L+I+DIDHFK INDT+GH VGD + +++ Q +R SD+I R+GG+EF V Sbjct: 402 IRAGQPCSLMIMDIDHFKVINDTYGHTVGDIVLQQISKAFQEVVRSSDIIARYGGEEFVV 461 Query: 296 IMSGTPAESAITAMLRVHEGLNTLRLPNTPQ-VTLRISVGVAPLNPQM----SHYREWLK 350 + G+ +S T R+ + + N Q +T IS+GV+ + Y + L Sbjct: 462 VAPGSDIDSGRTLAERLRQSVEARIFNNDEQPLTCTISIGVSHYATDIKFGVDAYEDMLA 521 Query: 351 SADLALYKAKKAGRNRTEVA 370 AD ALYKAK GRNR +A Sbjct: 522 RADNALYKAKDTGRNRICIA 541 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 2/172 (1%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + L+ S RD +TG+YNRR+ E E +R + ++++DIDHFK ND+ G Sbjct: 457 RLRESLRQQSIRDPLTGLYNRRYLEESFERELHRAQRSDDPIAVIMLDIDHFKHFNDSHG 516 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H+ GDE + AL + L +R DV R+GG+EFA++ G + A ++ + + + Sbjct: 517 HEAGDELLRALGQLLSGCIRAEDVACRYGGEEFAMVFPGMTLDQATRWADQLRHTVESTQ 576 Query: 321 LPNTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + + +S+GVA H + +++AD ALY+AK+ GRNR A Sbjct: 577 FASRGEALEQVSVSLGVAAFPQHGRHLADLIRAADAALYRAKREGRNRVITA 628 >UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D095_MYXXD Length = 347 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 7/182 (3%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + +LA + L ++ D +TG+ NRR +E L +EF RR+ +L+++DIDHFK Sbjct: 162 RANKELAARREELLALTRTDALTGLSNRRAFEERLNDEFARSRRYGAPLSLVMLDIDHFK 221 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 IND++GH GD + A+ + + LR D++ R+GG+EF ++ T A+ RV Sbjct: 222 RINDSFGHPFGDHVLKAVAQTARARLREVDLLARYGGEEFIALLPETGPADALRVCERVR 281 Query: 314 EGLNTLRLPNTPQ------VTLRISVGVAPLNPQM-SHYREWLKSADLALYKAKKAGRNR 366 + + L L + V L S+GVA + L++AD +LY AK AGRNR Sbjct: 282 DAIAALELEHVGGSGKPQCVRLTASLGVATVPSGDLPSAEALLRAADASLYAAKGAGRNR 341 Query: 367 TE 368 Sbjct: 342 VH 343 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 84/363 (23%), Positives = 145/363 (39%), Gaps = 25/363 (6%) Query: 29 EHQRSGLRFARRVRLPRAVGLAGMFLPIASTL-------VSHPPPGWWWLVLVGWAFVWP 81 + + ++ R+ R G + +A + + V + F Sbjct: 6 DERIKSHQYIRKRRTLMTFGSYFLTFAVAMAGWSSGLLELRYAVHFLIMSVAINGGFYLC 65 Query: 82 HLAWQIASRAVDPLSREIYNLKTDAVLAGMWV-----------GVMGVNVLPSTAMLMIM 130 L+ R DP E L ++ ++V + V ++P ++ + Sbjct: 66 FLSNWNLRR-KDPNLTEEQMLI--SLFPPLYVMYFMDDNQARSALAMVAIIPLLYGILGI 122 Query: 131 CLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGW 190 F L L+ + L F + + + +I + Sbjct: 123 DTKRYIRVAAAYFGGYLGLLGLLLWQKPRLVTPNSEFVLLTALFMVMAQMALIGGFISKL 182 Query: 191 VSYQTAT--KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 + +L E ++ VM++ D +TG+ RR L NEF CRR + +L ++D Sbjct: 183 RASLRVKNHQLNEALEKISVMASTDELTGLCTRRELMKQLSNEFSRCRRSSGALSLCLLD 242 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 IDHFK IND++GH GD + + + +Q +R D +GR+GG+EF +I+ TP + A Sbjct: 243 IDHFKRINDSYGHQAGDAVLKKVAQTMQSLVRSIDCLGRYGGEEFLLILPQTPLDGAFIT 302 Query: 309 MLRVHEGLNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 R+ + + P P+ + IS+G A L + + D ALY AK AGRNR Sbjct: 303 AERLRRAVMDIPFPEVAPEFRVTISLGAAEL-EEGEAMETLISRVDKALYAAKGAGRNRV 361 Query: 368 EVA 370 A Sbjct: 362 VSA 364 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 3/188 (1%) Query: 183 IYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDA 242 I L S+ +L K+RL + D +TG+YNR + E E +R+ Sbjct: 146 ILRSLAFIFSFIVKEELE--KKRLLEKAIIDHLTGLYNRFYLEEAGAREIARAKRYGFPI 203 Query: 243 TLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPA 302 +L++ D+D+FK +NDT+GH VGD +V + +R +D+ R+GG+EF V++ T Sbjct: 204 SLIMFDLDNFKQVNDTYGHQVGDRVLVKFASIVSSNVRSTDMPVRYGGEEFVVLLPHTYP 263 Query: 303 ESAITAMLRVHEGLNTLRLPNTPQV-TLRISVGVAPLNPQMSHYREWLKSADLALYKAKK 361 E A+ R+ E +V L +S G++ N E ++ AD A+Y+AK+ Sbjct: 264 EEAVKVAERIREEFEKFLFRFEGEVMRLTVSAGISFCNSGECSLGELIQMADKAMYEAKE 323 Query: 362 AGRNRTEV 369 G+NR EV Sbjct: 324 KGKNRIEV 331 >UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ36_DESVM Length = 698 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 63/178 (35%), Positives = 97/178 (54%), Gaps = 1/178 (0%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 + T E RL+ ++T D +TGV NRRH+ L +E +R+ R ++L++D DHF Sbjct: 494 FLDVTDQVEDTLRLEQLATTDELTGVANRRHFMARLEDEAARAQRYGRPLSVLLLDADHF 553 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 KSINDTWGH+ GD + +T + ++LR +D+IGR GG+EF V++ T E A+ R+ Sbjct: 554 KSINDTWGHEAGDMVLRHITDVMGLSLRENDLIGRLGGEEFGVLLPETAQERALRTAERI 613 Query: 313 HEGLNTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + V +SVG A + ++ AD L +AK+ GRNR Sbjct: 614 RAAVEDAPVAVRDVWVGCTVSVGAAEYRGANDSLDDLIRRADHMLMRAKEEGRNRVCA 671 >UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX32_DESOH Length = 396 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 90/349 (25%), Positives = 150/349 (42%), Gaps = 31/349 (8%) Query: 50 AGMFLPIASTLVSHPPPGW-----WWLVLVGWAFVWPHLAWQIA----SRAVDPLSREIY 100 G L +A P W +L + FV+ L + I R + Sbjct: 49 IGGVLLVA----YLVSPEWFDRSIVIALLSLYGFVFVLLLYFILAAFHRRRQKSSWPLME 104 Query: 101 NLKTDA----VLAGMWVG---------VMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGL 147 N+ + V AG W + S+++ I + L VA + Sbjct: 105 NIMFGSYVVIVCAGSWFTGTYYTFGALFLFFGASISSSLADIRKVRLAYLASFGALVAFI 164 Query: 148 VLMVVSCLV-TLELTGITVSFNSAPLEWWLSLPIIVIYPL-LFGWVSYQTATKLAEHKRR 205 V+ T I + + +PL W + + + L + +++ T + + Sbjct: 165 VMDSSGMFRHAPLFTRIPLHPDGSPLPVWFGVQVFITVSLTIMLYITIVTFKRWGVREDV 224 Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRH-NRDATLLIIDIDHFKSINDTWGHDVG 264 + MST DG+T + NRR + E + +R + + ++IDIDHFK+INDT+GH G Sbjct: 225 YRKMSTVDGLTRLTNRRTFIERSEKELSSGQRRPSSHISCIMIDIDHFKAINDTYGHAAG 284 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR-LPN 323 D+ +V + L R +D +GR+GG+EFA+++ T A+ R + + + Sbjct: 285 DKVLVKIATILTEKARPTDEVGRYGGEEFAMLLPATTLAGAVKVAERQRASIANAEIIVD 344 Query: 324 TPQVTLRISVGVAPLNPQM-SHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + S GVA + E LK+AD+ALY+AK+AGRNR AA Sbjct: 345 GNIIQVTASFGVASCPSDDIDNINELLKTADVALYEAKRAGRNRVVAAA 393 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 63/177 (35%), Positives = 101/177 (57%), Gaps = 3/177 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q T +++L ++ D +TG+ NRR E L D R + +L+I DIDHFK Sbjct: 279 QDVTTRLGREQKLLEIAHSDPLTGLNNRRAAEHTLERLIDTARISGKPFSLIIGDIDHFK 338 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 S+ND +GH GD + ++ L+ +R DV R+GG+EF +++ + + A R+ Sbjct: 339 SVNDRYGHPAGDRVLTSVAVILKQRIRLQDVAARWGGEEFLILVPDSSLDHAAELADRIR 398 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 +G+ L +PNT ++ IS+GVA L+P ++ AD ALY+AK+ GRNR ++A Sbjct: 399 KGVEDLLIPNTG--SVTISLGVAQLSPG-ETAASLIQRADKALYQAKRRGRNRVDIA 452 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 2/181 (1%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 ++ + +L E + +L M+T D +TG+ NRR + E +R R L++DID Sbjct: 272 INNRFLKELREAQEKLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDID 331 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 FK INDT+GH GD + L+ +R D++ R+GG+EF +++ T +A T Sbjct: 332 RFKKINDTYGHQAGDAVLSEFGATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAE 391 Query: 311 RVHEGLNTLRL-PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 ++ + Q+ + S+G++ + + + AD ALY+AK +GRNR Sbjct: 392 KIRAVTAATPIMFAGRQIAVTTSIGISMMQ-GDETAKAMIARADAALYEAKNSGRNRVVC 450 Query: 370 A 370 A Sbjct: 451 A 451 >UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter sp. M18 RepID=C6MUF5_9DELT Length = 739 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 96/177 (54%), Gaps = 3/177 (1%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 T++ E R + +S D +TG+YNRR ++ L E + R + T++ ID+D FK+ N Sbjct: 529 TEVLEESERFEQLSVTDALTGLYNRRFLKSRLEEELNRSIRQGLNLTVIFIDLDFFKNFN 588 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 D GH GDEA+ ++ +LR D++ R+GG+EF ++ GT A+ R+ + Sbjct: 589 DLCGHLAGDEALKITADIIKASLREMDIVARYGGEEFCAVLPGTSKAEAMIVAERIRSEI 648 Query: 317 NTLRLPNT---PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + P PQ+ L S+G+A + + S+D+ALY+AK +GRNR A Sbjct: 649 EKEKFPGEKDIPQMRLTASLGIASFPEDGRTFTTLVHSSDVALYEAKASGRNRIVAA 705 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 7/214 (3%) Query: 160 LTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSY----QTATKLAEHKRRLQVMSTRDGM 215 G ++ N + ++L I + V Y + T+ + L+ +T D + Sbjct: 206 FRGTFLNRNRSGALFYLEQSITPVRADQGQVVRYVATGKDITERVRMEEELKRAATTDAL 265 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQL 275 TG+ NR +E +L +++ CRR+ +LL+ D+DHFK++ND GH+ GD + AL + Sbjct: 266 TGLANRLSFEQLLERDYERCRRYGGALSLLMFDLDHFKAVNDAHGHEAGDAVLQALAGLV 325 Query: 276 QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGV 335 +R +D + R+GG+EF V++ TP +A ++ E + R P+ + S GV Sbjct: 326 LANVRTADTVARWGGEEFMVLLPETPLAAAGELAEKLRERVAAHRFPHGAP--VTASFGV 383 Query: 336 APLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 L R ++ AD ALY+AK GR+R E Sbjct: 384 CALR-DDDTCRTLVRRADEALYRAKHLGRDRVEC 416 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 60/175 (34%), Positives = 93/175 (53%), Gaps = 1/175 (0%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 ++ + + L+ + RD +TG +NRR+ + L E RR +LLI+D+DHFK IND Sbjct: 543 EIEKLQVALREQAIRDSLTGCFNRRYLDETLERELSRSRREGYPLSLLILDLDHFKRIND 602 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 T+GH GD+A++ L L+ +R DV+ R+GG+EF ++M P A + Sbjct: 603 TYGHMAGDQALIVLAETLRAGIRHEDVLCRYGGEEFVILMPRMPLAIAAERAELWRSKIA 662 Query: 318 TLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 +R+ +++ S GVA E ++AD ALY AK GRNR V + Sbjct: 663 EIRVTFGNFELSFTASAGVAAYPDHGKMPDELTQAADQALYTAKNEGRNRVVVYS 717 >UniRef50_B4B7Z8 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B7Z8_9CHRO Length = 472 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 68/243 (27%), Positives = 124/243 (51%), Gaps = 11/243 (4%) Query: 133 NLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVS----FNSAPLEWWLSLPIIVIYPLLF 188 L+G ++F+ L + + V + TG + + E W + + Sbjct: 218 KLIGKIMLKIFLQNLDAKLFNNFVEVVKTGKPLEKDFFYKKENDERWYHFIALKLGDGFS 277 Query: 189 GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 ++ + T+ + LQ ++ DG+TGV NR ++ L E+ CRR +L++ D Sbjct: 278 --ITVRDITQRKLMELELQRLARVDGLTGVANRLCFDETLAKEWQRCRREQEPLSLILCD 335 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAIT 307 +D+FK NDT+GH GDE ++ + + + + R +D++ R+GG+EF +I+ T E AIT Sbjct: 336 VDYFKKYNDTYGHLKGDECLIEIAKAISRAVKRPTDLVARYGGEEFVIILGNTATEGAIT 395 Query: 308 AMLRVHEGLNTLRLPNT---PQVTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAG 363 + E + L++P+ + + +S+GVA + P + + SAD ALY+AK+ G Sbjct: 396 VAKVIQEKVQQLKIPHQTAKDKNYITLSIGVASVIPYPKLSPKILIASADRALYEAKEQG 455 Query: 364 RNR 366 R+ Sbjct: 456 RDC 458 >UniRef50_Q2BLJ7 Putative signal transduction protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLJ7_9GAMM Length = 478 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 4/190 (2%) Query: 182 VIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 ++ L FG +S T RRL S D +TG+YNR+H++ E R+N+ Sbjct: 276 MLASLTFGALSAYTCV----LMRRLYQRSVTDSLTGLYNRQHFKFRAEQEASRAVRYNQP 331 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 T+L+IDID FK IND +GH GD + ++ ++ LR SD++GR+GG+EF V++ + Sbjct: 332 LTMLMIDIDQFKQINDKFGHQTGDTVLQQASQYIRDNLRESDLLGRYGGEEFIVLLPQSD 391 Query: 302 AESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKK 361 E A R+ + L+ V++ +SVG+A +P Y E + AD ALY AK+ Sbjct: 392 LEQATQCADRIRDSLDKSIFIYGSLVSISVSVGLAQQSPDTFVYDELVSQADQALYTAKR 451 Query: 362 AGRNRTEVAA 371 GRNR E+ A Sbjct: 452 NGRNRIEIYA 461 >UniRef50_D1B074 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B074_SULD5 Length = 172 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 4/169 (2%) Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ S DG+TG+ NRR+++ + E RR+ TL+++D+DHFK INDT+GH VGD Sbjct: 2 LKQESITDGLTGLRNRRYFDQRISEEVALSRRYKLPLTLMLVDVDHFKKINDTYGHTVGD 61 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP--- 322 E + L++ + +R SD++ R+GG+E +I T E A R+ E + ++ Sbjct: 62 EVLKKLSQIILSVVRDSDIVARYGGEEIVIITPNTTKEDAGILAERLREKVEQTKVATIA 121 Query: 323 -NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 V + IS+GV L+ ++ L+ +D ALY AKK GRNR ++ Sbjct: 122 TTQEVVQVTISIGVCALSAVITDQEALLEESDQALYLAKKYGRNRVVIS 170 >UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FZW1_SORC5 Length = 299 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 3/190 (1%) Query: 181 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR 240 + I P +F ++S A++ + M+ DG+T ++N+R+ L E RRH R Sbjct: 112 VKIGPTIFKFLSGADVE--AQYHEEIYRMTIIDGLTQIHNKRYLYEALEREIIRGRRHER 169 Query: 241 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT 300 D +L+ DIDHFK IND GH GD + + R +Q +R +V R+GG+EFA+I+ T Sbjct: 170 DLAILLFDIDHFKRINDVHGHLAGDFVLKEVARIVQSRIRRDEVFARYGGEEFAIILPET 229 Query: 301 PAESAITAMLRVHEGL-NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKA 359 E A + + + L + + + ISVGVA L + +K AD LY A Sbjct: 230 SIEGAAALGETLRQKVAEHLFVFQADSIRVTISVGVALLQEGDRTANDLIKRADERLYHA 289 Query: 360 KKAGRNRTEV 369 K +GRNR Sbjct: 290 KNSGRNRVCA 299 >UniRef50_A6Q482 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q482_NITSB Length = 458 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 116/211 (54%), Gaps = 6/211 (2%) Query: 165 VSFNSAPLEWWLSLPIIVIYPLLFGWV--SYQTATKLAEHKRRLQVMSTRDGMTGVYNRR 222 + F+ + + I+ LF + + ++ + + L + DG+T +YNR Sbjct: 248 ILFDPTEMLETEDIKILESLQKLFSIMLTKEREFYRIKKEEAHLFQKAITDGLTKLYNRY 307 Query: 223 HWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGS 282 + + + +EF+ +R+N ++++ID+D FK IND++GH+VGD + A L+ +R S Sbjct: 308 YLDKFIESEFEKAKRYNYPLSVVMIDLDFFKRINDSYGHEVGDMVLKAFAEFLKKNVRKS 367 Query: 283 DVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN---TLRLPNTPQVTLRISVGVAPLN 339 DV+ R+GGDE ++M T A M R+ L+ TL+ ++T S G+A ++ Sbjct: 368 DVVFRYGGDELLIVMPFTDLHQARDVMERIRNLLHQKGTLQF-GDIKITYTFSAGIATID 426 Query: 340 PQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + +E +K AD ALYKAKK GR+R E+A Sbjct: 427 ENIKDAKELIKKADEALYKAKKLGRDRIELA 457 >UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNC9_9BACT Length = 494 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 96/171 (56%), Gaps = 3/171 (1%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 + + RL+ ++ RD +TG++NRR + +L +E + R+ +++++DIDHFK++ND Sbjct: 326 IQSYSDRLEYLANRDSLTGLWNRRKMDQILLSETERSSRYGSSLSVVMVDIDHFKNVNDN 385 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 +GH+VGD + ++ ++ R D +GR+GG+EF V++ T + A+ R+ + Sbjct: 386 FGHEVGDTVLSSIAALMKNCTRAGDSVGRWGGEEFLVVLPETDVKGALEYAERMRSAVED 445 Query: 319 LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + + S GV E++ AD ALY AK+ GRNR E+ Sbjct: 446 NVFHDD--IRITSSFGVTQYR-SGEPVNEFVARADEALYDAKEKGRNRVEI 493 >UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=B8KJJ5_9GAMM Length = 540 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 6/181 (3%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L L +++ D +T +NRR + L E + R+ R ++L++DID FK Sbjct: 355 QRTRELEAKNEELDHLASVDKLTDTFNRRALDKALLAELERADRYQRPLSILLMDIDLFK 414 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +ND +GH GD+ +V L++ ++ LR SD++GR+GG+EF VI T E A +V Sbjct: 415 QVNDEYGHLTGDKVLVTLSQTIRENLRASDILGRWGGEEFLVICPETDLEQARNVAEKVR 474 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE---VA 370 + + T+ IS+G++ L + + + AD ALY+AK GRNR +A Sbjct: 475 QAIEGTDFELGK--TITISIGLSVLI-EGTSAESLVAEADKALYQAKSQGRNRVCTTPIA 531 Query: 371 A 371 A Sbjct: 532 A 532 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 12/203 (5%) Query: 179 PIIVIYPLLFGWVSYQTATKLAEH----------KRRLQVMSTRDGMTGVYNRRHWETML 228 + P V Q A ++EH + L+ S +D +TG+YNRR+ E L Sbjct: 914 YLSTSEPEKISEVKQQLARAVSEHISLALVNLQLRESLESQSIKDSLTGLYNRRYMEESL 973 Query: 229 RNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRF 288 + E + +R L++ID+DHFK ND +GH GD + + L +R D+ R+ Sbjct: 974 KREINLAQRKQHPVGLIMIDVDHFKQFNDNFGHKAGDLILHEVGNFLMANVRSGDIACRY 1033 Query: 289 GGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP--NTPQVTLRISVGVAPLNPQMSHYR 346 GG+EF +I+ + ++ +G+ L N+ +L +S+GVA Sbjct: 1034 GGEEFLLILPEASLSDSQQRAEQIRKGIKQLNFQQYNSAFTSLTVSIGVACFPAHGKQGE 1093 Query: 347 EWLKSADLALYKAKKAGRNRTEV 369 ++SAD+ALY+AK GR+R V Sbjct: 1094 TLIQSADMALYQAKNQGRDRVVV 1116 >UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Y8_SULSY Length = 492 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 3/164 (1%) Query: 207 QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDE 266 + + D +TG++NR +T+++ E + +R+N+ ++L+ DIDHFK INDT+GHD GD Sbjct: 330 EKKAITDKLTGLFNRSIIDTLIQVEIERAKRNNKPISILLFDIDHFKKINDTYGHDKGDY 389 Query: 267 AIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ 326 A+ + + TLR SD + R+GG+EF I+ T + A ++ + + Sbjct: 390 ALKTIAEIARRTLRKSDYVLRWGGEEFLAILPETDLDGATKVAEKIRSNIENYNFKDIG- 448 Query: 327 VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + +S+GV L +K AD ALY AK GRNR EV+ Sbjct: 449 -RVTVSIGVTMLKIG-EPLDNAIKRADEALYAAKNKGRNRVEVS 490 >UniRef50_A1STZ3 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STZ3_PSYIN Length = 305 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 5/186 (2%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 F +S++ T + ++ +S DG+TG+ NRR+++ L NE+ C R + TL +I Sbjct: 117 FFVISHKNITNRKLAEEKVLHLSQIDGLTGIANRRYFDETLENEWKRCARSKQPLTLAMI 176 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAI 306 D+DHFK +NDT+GH GD ++V + L+ R +D+ R+GG+EFA+IM T A+ Sbjct: 177 DVDHFKLLNDTYGHQAGDNSLVMIGNLLKDLAQRPADLCCRYGGEEFAIIMPQTSNAQAV 236 Query: 307 TAMLRVHEGLNTLRLPNTPQVT---LRISVGVAP-LNPQMSHYREWLKSADLALYKAKKA 362 ++ + L +PN T L +S+G+A L Q + R + AD +LY+AKK Sbjct: 237 HIASKLITLIAALNIPNKKSPTKAILTVSIGLATVLPSQENDTRSLIAKADKSLYRAKKK 296 Query: 363 GRNRTE 368 GRNR E Sbjct: 297 GRNRVE 302 >UniRef50_A0L7G7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7G7_MAGSM Length = 476 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 3/179 (1%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 ++ + H R+L+ ++ DG+TGV NR + +L E RRH ++++ DI Sbjct: 268 VFTFADIASIESHMRKLEEIAFTDGLTGVANRASLQQILNAEMQRSRRHGGTFSIILFDI 327 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 DHFK +ND +GH VGD+ + L + LR +D I R+GG+EF V+ E+A Sbjct: 328 DHFKQVNDNFGHQVGDDVLRLLASTIADNLRATDTIARWGGEEFMVVCPEINIEAAHRLA 387 Query: 310 LRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 ++ + + + P Q+ S GV R + AD ALY+AK+ GRNR E Sbjct: 388 EKLRQLIEHITFPEVKQI--TSSFGVTQFQKNDQS-RSLTQRADCALYRAKEGGRNRVE 443 >UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales RepID=D0J6R3_COMTE Length = 521 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 4/232 (1%) Query: 142 LFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAE 201 + L + +V + I ++ L + ++ + + + Sbjct: 266 YYFKNLPSLPFIIMVAKAHSDIFTAWRKRALIIACLMGVLTAAFIGLSFAFVTQLQRRIH 325 Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 + L +++ DG+TG+ NRR + ML E+ RR++ +LL +DID FK NDT+GH Sbjct: 326 AESELALLARTDGLTGLNNRRRLDEMLDQEWHRARRNHSIFSLLFVDIDRFKVYNDTYGH 385 Query: 262 DVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 GD+ I + + + + R D+ R+GG+EF V++ T E A + ++ L Sbjct: 386 QAGDDVIATIAQCIGDNIRRPGDIAARYGGEEFIVVLPDTSLEGASCLAESIRAAVSQLS 445 Query: 321 LPNTPQ--VTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTEV 369 + ++ + +S+G A P+ ++SAD ALYKAK GRN+ V Sbjct: 446 VEHSGSEFGYITVSIGCAAWEPEHDADVASVIRSADEALYKAKTTGRNKVVV 497 >UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8G7_ALHEH Length = 237 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 3/202 (1%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 + + + ++ + + + + T+ + R++ ++T D +TG+ NR + Sbjct: 30 DGSDITVEITTNAAYYKGVKLIFCNCRDITERKRDQERIRYLATTDALTGIMNRGEFTRH 89 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGR 287 L E + R NR +++ D+DHFK +NDT+GHD GDE + Q+ +R DV R Sbjct: 90 LTKEIERAARFNRPVAVVMYDLDHFKRVNDTYGHDAGDEVLKTAVAQVNNAIRRVDVHAR 149 Query: 288 FGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYRE 347 +GG+EF +++ T +A+ + R+ + + S GV L P+ + Sbjct: 150 WGGEEFILLLPETDLAAAVKSAERLRAAIAEHPFKQPE--RVTASFGVTTLGPR-DRFDV 206 Query: 348 WLKSADLALYKAKKAGRNRTEV 369 +K AD ALY AK AGRNR E Sbjct: 207 LIKRADDALYLAKHAGRNRVEA 228 >UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0S0_DESOH Length = 374 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 6/188 (3%) Query: 187 LFGWVSYQTATKLAEHK--RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 LF V+ A ++ ++ + + +D +TG+YNRR++ E RR+ R +L Sbjct: 179 LFAAVAENVAIAVSNAMTLQQTRELIRKDELTGLYNRRYFFERFEREVYRSRRYGRTISL 238 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 ++IDIDHFK ND++GH GD + ++R + +LR DV+ R+GG+EF V++ T E+ Sbjct: 239 MMIDIDHFKEYNDSYGHLRGDRVLKTISRIFESSLRKIDVVARYGGEEFLVLLPETSREN 298 Query: 305 AITAMLRVHEGLNTLRL----PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 AI ++ + + + PN L I++GV+ + + L AD ALY K Sbjct: 299 AIRVAEKLRQAVEKVDFNEDAPNLGPCALTITIGVSAIPDDANEPILALDLADKALYMGK 358 Query: 361 KAGRNRTE 368 GRN+ Sbjct: 359 AQGRNQVC 366 >UniRef50_C6BZT6 Diguanylate cyclase with extracellular sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZT6_DESAD Length = 442 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 6/208 (2%) Query: 165 VSFNSAPLEWWLSLPIIVIYPLLFGWV---SYQTATKLAEHKRRLQVMSTRDGMTGVYNR 221 + S +W+L I + G++ + ++A L+ MS D +TG+YNR Sbjct: 237 IQAVSVTPDWFLPTAIAGFGIMAGGFIFLYIFTLKRQVASRTEELRQMSQTDMLTGLYNR 296 Query: 222 RHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG 281 R + ++ +EFD +R+N T ++IDID+FK+INDT+GH VGD +V L R Sbjct: 297 RKMDEIMHHEFDRFKRYNTPITFILIDIDNFKTINDTYGHAVGDNVLVRFAEILISNTRK 356 Query: 282 SDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQ 341 +D IGR+GG+EF V+ T + + ++ + + R P S G+ +N Q Sbjct: 357 TDRIGRWGGEEFIVVCPETTSGEGMIIAEKLRQRIAETRFPTIN--NCTASFGITEIN-Q 413 Query: 342 MSHYREWLKSADLALYKAKKAGRNRTEV 369 + D ALY +K+ GRN+ + Sbjct: 414 QDDFMSLFARCDTALYSSKEQGRNKVTM 441 >UniRef50_Q1K456 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K456_DESAC Length = 403 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 63/171 (36%), Positives = 104/171 (60%), Gaps = 2/171 (1%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 ++L+ +++ D +TG+ +RR + ++ F R+ R + LIIDIDHFK +NDT+GH Sbjct: 227 NQKLKELASTDVVTGLQSRRAFMEEAKSLFQIAERYQRPFSFLIIDIDHFKKVNDTYGHL 286 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT--LR 320 GD +V L + + LR +D++GR GG+EFAVI+ T + + R+ E + T +R Sbjct: 287 GGDVVLVELGKIMSSCLRATDILGRIGGEEFAVILPETGPDHTAELIERLLEKVRTTEIR 346 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + V++ +S+GVA + P H + + +AD ALY+AK GRNR A+ Sbjct: 347 IDDDTLVSVTVSIGVATVPPLPIHVGKVMAAADKALYQAKSDGRNRCCEAS 397 >UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7C6_9DELT Length = 297 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 92/168 (54%), Gaps = 1/168 (0%) Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 + + +ST DG+T V+NRR++ L E RR++R LLI DIDHFK NDT+GH Sbjct: 127 YHEEIFRLSTVDGLTQVFNRRYFMETLERELSRARRYDRPLALLIFDIDHFKRCNDTYGH 186 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN-TLR 320 GD + + + + R DV+ R+GG+EF VI+ A ++ + + Sbjct: 187 RAGDFVLRRIAELVTMRARKVDVVSRYGGEEFTVILPEIDIRGASAFAEKIRKLIADETF 246 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + ++ + IS+GVA + P +++ + +++AD LY AK GRNR Sbjct: 247 IFEGRKIPVTISIGVAEIGPSVANADDMIQTADRRLYAAKTGGRNRVV 294 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 5/184 (2%) Query: 188 FGWVSYQTATKLAEHKRRLQ---VMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 G ++ L +R L+ ++ D +TG+ NRR ++ +L E RR + +L Sbjct: 326 IGIIARHFNKLLEVVERLLREKDQLAGTDQLTGLNNRRRFKELLDQELIRYRRIPKPLSL 385 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 LI DIDHFK +NDT+GH+ GD + + + LQ T+R +D R+GG+EF V++ T AE+ Sbjct: 386 LIFDIDHFKRVNDTYGHETGDLVLKEMAQLLQATVRRTDTPARWGGEEFLVLLPATTAEA 445 Query: 305 AITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 A+ ++ + + P + S GVA + L+ D ALY+AK+ GR Sbjct: 446 AMALAEKLRQAIEEHDFPRVG--RVTASFGVAAFHDGEQEESALLRRVDKALYQAKRQGR 503 Query: 365 NRTE 368 NR Sbjct: 504 NRVV 507 >UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacteria RepID=B0CDD6_ACAM1 Length = 630 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 5/163 (3%) Query: 210 STRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIV 269 S DG+T ++NRR ++ L E+ RR + ++++ D+DHFK NDT+GH GD + Sbjct: 466 SRIDGLTSIHNRRSFDESLDKEWRRLRREQQPLSIILCDVDHFKQYNDTYGHQAGDTCLQ 525 Query: 270 ALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN---TP 325 + + ++ R +D++ R+GG+EF V++ TP A + + LR+P+ + Sbjct: 526 EVALAIDKSVKRPADMVARYGGEEFVVLLPNTPLPGATHIAEMIRTAIEVLRIPHKTSSA 585 Query: 326 QVTLRISVGVAPLNPQM-SHYREWLKSADLALYKAKKAGRNRT 367 + +S+GVA + P Y E L++AD ALY+AK+ GRNR Sbjct: 586 SDQVTLSLGVATVIPNTQQTYTELLEAADAALYRAKQQGRNRV 628 >UniRef50_A7BWA5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Beggiatoa sp. PS RepID=A7BWA5_9GAMM Length = 578 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L + LQ + + D +T + NRR ++ E+ +R + TL++ D+D FK Sbjct: 380 QIEQELHKTNEELQRLVSLDSLTNIANRRRFDEHFDQEWKRSKREKKPITLIMCDVDFFK 439 Query: 254 SINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 NDT+GH +GD+ + + + + + R SD++ R+GG+EFAVI+ T E A+ + Sbjct: 440 LYNDTYGHQLGDKCLRVIAKAISKQIKRPSDLVARYGGEEFAVILPNTKPEGAVKVAEAI 499 Query: 313 HEGLNTLRLPN--TPQVTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTEV 369 L L++ + +P + +S+GV+ L + + L AD ALY+AKK GRNRT + Sbjct: 500 RLELEHLKIAHLSSPNKIVTLSLGVSSLPTRPPFSQKILLTLADKALYEAKKRGRNRTVL 559 >UniRef50_Q30SY9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SY9_SULDN Length = 611 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 3/165 (1%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 L+ +++ D +TG YNRR + ++ E R +++ +L++ DIDHFK +NDT+GH G Sbjct: 449 ELERLASIDKLTGAYNRRMIDEFMKKEIFLHVRDSKNLSLIMADIDHFKLVNDTYGHQAG 508 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 D + + R + T+R SD+ GR+GG+EF VI T ++ A+ ++ E + Sbjct: 509 DAVLSDVGRIISSTIRKSDIFGRYGGEEFIVICPNTSSQQALILAQKIREEIENFHFAEV 568 Query: 325 PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 IS+GVA L +K AD ALY AKK GRNR + Sbjct: 569 GHK--TISLGVATLIANDE-VENIIKRADDALYIAKKEGRNRVVL 610 >UniRef50_D2BVU6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya dadantii Ech586 RepID=D2BVU6_DICD5 Length = 483 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 175 WLSLPIIVIYPL---LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNE 231 W+ + YP + S T L + + LQV++ D +TG+ NRRH++ + Sbjct: 272 WIHAEAMASYPEDGNTVFYGSMLDITDLKQSETLLQVLAQTDSLTGIANRRHFDERYQQL 331 Query: 232 FDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSD-VIGRFGG 290 + +LL+IDID FK ND++GH GD I ++ L L S+ ++GR+GG Sbjct: 332 WRQHESIQMPLSLLMIDIDRFKRFNDSYGHSKGDACIKSVVETLAGQLPSSECLLGRYGG 391 Query: 291 DEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT--PQVTLRISVGVAPLNPQM--SHYR 346 +EF V++ T + A+ R + + ++ +P+T PQ + +S+GVA P S Sbjct: 392 EEFTVVLPQTDYQQALALAERCRQAVESMEIPHTKSPQGVVTVSIGVAVARPGDAGSSMT 451 Query: 347 EWLKSADLALYKAKKAGRNRTEV 369 + AD ALY+AK GRNR E Sbjct: 452 QLSNDADDALYRAKHLGRNRVEA 474 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 100/179 (55%), Gaps = 2/179 (1%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 + T + L+ ++ D +T ++NRR++ T+ E+ R++ L +IDIDHF Sbjct: 244 IRDITDSKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMIDIDHF 303 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 KS+ND +GH VGD + + + L LR D++ R+GG+EF +++ T ++A + R+ Sbjct: 304 KSVNDRYGHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFVILLPETDLQTACASTERL 363 Query: 313 HEGLNTLRLPN-TPQVTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTEV 369 + R+ + V++ +S+GV + + L +AD LY+AK+AGRNR E+ Sbjct: 364 RVAVAERRIETPSGPVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRAKQAGRNRVEI 422 >UniRef50_Q2VZ27 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VZ27_MAGSA Length = 355 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 67/170 (39%), Positives = 95/170 (55%), Gaps = 2/170 (1%) Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 + H L+ +++RD +T NRRH+E + E D+ RR R LL +DIDHFK INDTW Sbjct: 182 SRHMAELEELASRDSLTQTANRRHFEHLAGLELDHARRMGRSFALLALDIDHFKRINDTW 241 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH GDEA+ A +++LR D++GR GG+EFAV + T + A R+ + L Sbjct: 242 GHAAGDEALKAFANACRLSLREYDILGRIGGEEFAVALPNTGPDGARVIAERLRAAVEEL 301 Query: 320 RL--PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + L +S+G+A L L+ AD ALY+AK +GRNR Sbjct: 302 VVRPAKGELFDLTVSIGIAQLREGDLTVETMLERADQALYRAKNSGRNRV 351 >UniRef50_Q089K4 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q089K4_SHEFN Length = 312 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 3/178 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q T L + ++++ + D +TG++NRR + + + E R N+ +LL+IDID+FK Sbjct: 130 QAQTSLEQAHQQIESLVNTDQLTGMHNRRSYNQLAKQECARAIRFNQQLSLLVIDIDYFK 189 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 IND +GHD GD + + LR SD + R GG+EF +I+ T E A+ R+ Sbjct: 190 VINDNFGHDGGDSILKQFAQICSDLLRQSDSLSRIGGEEFTIILPMTDGEGAMIIAERIR 249 Query: 314 EGLNTLRLPNTP---QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 E + T + + +S+GV+ L ++ AD+A+Y AK+ GRN+ + Sbjct: 250 EHIAKHSFHTTQTNNNINVTVSIGVSSLTAGDKVIQDLFSRADMAMYCAKRGGRNQVQ 307 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 6/234 (2%) Query: 139 GPRLFVAGL---VLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQT 195 G RLF + +++ + E + L L + I ++ ++ Sbjct: 239 GERLFASLERVGDTSMIAAVSINEDNFFADWRRHSLLMGGFGLVVGAIL-FTLSILTVRS 297 Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 + +++LQ +T D +TG+ NRR+ E +R +++++DIDHFK + Sbjct: 298 QQEQFRIQQQLQQQATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMMDIDHFKKV 357 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH VGD+ ++ + + + R SD++ RFGG+EF +++ T A T ++ + Sbjct: 358 NDTYGHHVGDQVLMEVAQTCRSHCRESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQA 417 Query: 316 LNTLRLPNT-PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + L P V++ S GV+ + + AD ALY+AK GRN Sbjct: 418 IEDLSFPTAEGNVSVTASFGVSQWQGETK-IDRVVSRADAALYQAKHDGRNCVR 470 >UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AX52_RUBXD Length = 378 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 10/257 (3%) Query: 118 VNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSA----PLE 173 +L ++ + + A L + G +V +E +G ++ + Sbjct: 127 YPMLAILCIIAQLIFDTQTALRLSLGLFGTATALVGAGALVEESGHRITLDQTAWIAQQS 186 Query: 174 WWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFD 233 +L+ I ++Y + LAE RL + D +TG+ NRR LR E + Sbjct: 187 AFLAAVIALVYATSYVKSQLARQRTLAEAMHRL---AHTDPLTGISNRRSLYAALRREME 243 Query: 234 NCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEF 293 RR+ + ++++ D+D FK +NDT+GH+ GD A+ + + LR SD +GR+GG+EF Sbjct: 244 AARRYGKPLSVILFDLDRFKLLNDTYGHNQGDAALRRVAHTARAALRASDHLGRWGGEEF 303 Query: 294 AVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSAD 353 V+ T + A R+ E + R P P L S GVA P + L+ AD Sbjct: 304 IVLAPETDLDQARHLAERLREAIALDRPPGRPP--LTASFGVASCRPD-DSPEDLLRRAD 360 Query: 354 LALYKAKKAGRNRTEVA 370 LY+AK GRNR E A Sbjct: 361 EGLYRAKAGGRNRAETA 377 >UniRef50_A6DDS7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDS7_9PROT Length = 750 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 100/173 (57%), Gaps = 4/173 (2%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 +K+ + ++L+ M+ D +T +YNR ++ +L+ + +R+ +L+ +DID+FK IN Sbjct: 581 SKIKKLSKQLETMAFYDKLTNIYNRAKFKNILKEFIEYSKRYKTPLSLIFLDIDYFKKIN 640 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 D +GH+ GD + + + +++LR SDV GR+GG+EF +++ T A ++ + + Sbjct: 641 DNFGHEKGDLVLKEMVKVAKLSLRESDVFGRWGGEEFLILLPNTDINGAKIVAEKIRDAI 700 Query: 317 NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + + +S+GV L + ++ AD+ALY+AKK GRNR V Sbjct: 701 ESHDFDG---IKVTVSLGVTQL-KEDDTIESFVNRADIALYQAKKEGRNRVVV 749 >UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQK2_CHRVO Length = 585 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 2/178 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 ++ L + +L ++ D +TG++NR L+ E R +L++D+DHFK Sbjct: 407 ESNRLLVQKAAQLAQLARNDALTGLHNRMAANEQLQEEHLRHGRSGAPYAVLLLDVDHFK 466 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +NDT GHD GD + + L+ R +D + RFGG+EF +++ T A+ A ++ Sbjct: 467 RVNDTHGHDAGDRVLRHIADILRRAARATDFVARFGGEEFLLLLPETDADGAAVLAEKIR 526 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + P+ + +S+G+A + P S +K AD ALY+AK AGRNR E AA Sbjct: 527 ASVEQSQAPDVG--RVTLSIGLATVVPADSQPEMAVKRADQALYRAKAAGRNRVEAAA 582 >UniRef50_B0C2A7 Diguanylate cyclase (GGDEF domain), putative n=4 Tax=Cyanobacteria RepID=B0C2A7_ACAM1 Length = 368 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 95/183 (51%), Gaps = 7/183 (3%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L E +RL +++ D +T + NRR + L E+ R L++IDID+FK Sbjct: 169 QLHKQLEEANKRLTYLASVDELTQLPNRRAFTEALNREWRRMAREKSSLALIMIDIDYFK 228 Query: 254 SINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 NDT+GH VGD + + R + + R +D+ R+GG+EFAVI+ T AI + Sbjct: 229 VYNDTYGHPVGDSCLFQVARVIHTCVRRPADLPSRYGGEEFAVILPNTTLSGAIHVAENM 288 Query: 313 HEGLNTLRLPNTPQVT---LRISVGVAPLNPQMSHYRE---WLKSADLALYKAKKAGRNR 366 + L +P+ + +S+GVA + P + L +AD ALYKAK GRNR Sbjct: 289 RLSVQRLMIPHKNSANGPYVSLSLGVASVIPDIQEMESETPLLLAADQALYKAKAEGRNR 348 Query: 367 TEV 369 V Sbjct: 349 VCV 351 >UniRef50_Q1Q3F0 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3F0_9BACT Length = 344 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 5/185 (2%) Query: 186 LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 L V +T +L + +L +S D +TG+ NRR ++ ML NE+ R + +LL Sbjct: 156 LTLAQVLEKTNQELQQANEKLHQLSRTDSLTGLANRRFFDEMLHNEWKQSVRLAKPLSLL 215 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAES 304 +IDID FK+ NDT+GH GDE + ++ + L R D+I R+GG+EF ++S T Sbjct: 216 MIDIDFFKNYNDTYGHQKGDECLKRVSMAILSALKRECDIIARYGGEEFVALLSDTDESG 275 Query: 305 AITAMLRVHEGLNTLRLPN---TPQVTLRISVGVA-PLNPQMSHYREWLKSADLALYKAK 360 A+ + + + +P+ + +S+G++ + S + + AD ALY AK Sbjct: 276 AVMVAKAMQSNIEAMNIPHKDSNASGRITVSIGISNEVPSAASSPEKLISKADKALYLAK 335 Query: 361 KAGRN 365 GRN Sbjct: 336 YEGRN 340 >UniRef50_A9WGU1 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WGU1_CHLAA Length = 324 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 67/183 (36%), Positives = 99/183 (54%), Gaps = 8/183 (4%) Query: 194 QTATKLAEHKRRLQV-------MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 Q L R LQ ++ D +TGVYNR H+ + R+EF R+ R T+ + Sbjct: 140 QARKALEAANRELQRALAREAELARMDWLTGVYNRSHFYELARHEFAIATRYERPLTMCM 199 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAI 306 +D+DHFK IND +GH VGD+ + A+ + + +R +D IGRFGG+EF +++ T SA+ Sbjct: 200 LDVDHFKQINDRYGHLVGDQVLRAVAQTVAHQIRTADSIGRFGGEEFILLLPNTNLPSAL 259 Query: 307 TAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 T R+ + L++ + VT ISVGVA + + AD ALY AK+ GRN Sbjct: 260 TLAERLRVTIADLQVHTDRGIVTATISVGVAERQSTDTTIERLIDRADRALYAAKRQGRN 319 Query: 366 RTE 368 Sbjct: 320 CVV 322 >UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAX1_PSEFS Length = 388 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 86/391 (21%), Positives = 159/391 (40%), Gaps = 38/391 (9%) Query: 7 NDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTL---VSH 63 +++ F G++ + + + L R G L + H Sbjct: 8 SNQADFMNGLGRGQDQDCFIEEQVRTDRLHQLFRQSFAAIFGSYLAALMLCWLCWDRFDH 67 Query: 64 PPPGWWWLVLVGWAFVWPHLAWQIAS---RAVDPLSREIYNLKTDAVLAGMWVGVMGVNV 120 W L + + + + P E T + AG+W Sbjct: 68 QVILVWLGALAVSSLLRVKMFMEWFRCPNAERTPERWERRYWLTLMLSAGIWGA------ 121 Query: 121 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSC--------LVTLELTGITVS----FN 168 A+ ++ + + LF G+ + VSC L +L L + + F Sbjct: 122 ---GALAVMPTDDRLSQALVMLFTVGMSVSAVSCYSAYRYMTLASLALVLLPCTLWLLFQ 178 Query: 169 SAPLEWWLSLPIIVIYPLLFGWV-----SYQTATKLAEHKRRLQ----VMSTRDGMTGVY 219 + ++ +++ ++V + + + A +L R + D +TG+ Sbjct: 179 PSSMQVGVAIAVLVFSTFVVSATRKLSDALEKAFRLTRQMERAHTISTRAAQTDELTGLM 238 Query: 220 NRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL 279 NRR + + ++ CR + + L++D+DHFK INDT+GH GD+ + + + + Sbjct: 239 NRRAFFEHAQVLYEQCRHNRQPLCALMMDMDHFKQINDTYGHQAGDQVLRQIGGVISASF 298 Query: 280 RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLN 339 R +DV GR GG+EFAV++ T ++A T ++ + ++ L + P L S+GVA + Sbjct: 299 RQADVYGRLGGEEFAVLLPNTSLDTARTIAEQLVKAISGLA--SEPVHGLSASLGVASTH 356 Query: 340 PQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 Q + +AD ALY+AK GRN+ VA Sbjct: 357 TQDQDLHGLMNTADKALYRAKAQGRNQVAVA 387 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 62/171 (36%), Positives = 99/171 (57%), Gaps = 1/171 (0%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 T + + +L+ ++TRD +TGV+NRR++ + E ++ +R+ +L++ DIDHFK I Sbjct: 589 VTAQKQAESKLRELATRDSLTGVWNRRYFFELAARELESAQRYKHPLSLILYDIDHFKRI 648 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH +GDE + LT+ + LR D++ R GG+EFAV++ T E A T R+ G Sbjct: 649 NDTYGHMIGDEVLRQLTQLVGANLRNVDLLARVGGEEFAVLLPHTYLEQAHTVARRILRG 708 Query: 316 LNTLRL-PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 +N + + L IS+G++ + + AD ALY AK GRN Sbjct: 709 VNEAVIRTEAGPLQLTISIGMSSSAHADNCLESLIHDADQALYAAKNKGRN 759 >UniRef50_B7K319 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Cyanothece RepID=B7K319_CYAP8 Length = 660 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 112/235 (47%), Gaps = 16/235 (6%) Query: 149 LMVVSCLVTLELTGITV----SFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKR 204 +M+V + G+ +++ E +SL V L +L E Sbjct: 424 IMMVKTYYQSKANGLVYLEQCNYHRQWTEEEMSLLESVAAQLGIAIAHSHLLEQLKEANE 483 Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 +L ++ DG+T V NRRH++ +L + C R + +L++ D+D+FK ND +GH +G Sbjct: 484 KLAALANLDGLTQVANRRHFDEILAQRWKQCAREKQPLSLIMCDVDYFKRYNDFYGHQMG 543 Query: 265 DEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 DE ++ + + + T+ R D++ R+GG+EFAVI+ T + E + +L + + Sbjct: 544 DECLIKVAQTIAKTVQRPGDLVARWGGEEFAVILPNTDVNGVKYIAQSIREQVQSLAIIH 603 Query: 324 TPQV---TLRISVGVAPLNPQMSHYR--------EWLKSADLALYKAKKAGRNRT 367 + IS+G+A + P + AD ALY+AK+ GR+R Sbjct: 604 EDSPIKNQVSISLGIATIIPPAKTLENNHESLIKALIAQADQALYQAKEQGRDRI 658 >UniRef50_B7KCD2 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Cyanothece RepID=B7KCD2_CYAP7 Length = 960 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 8/206 (3%) Query: 169 SAPLEW---WLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWE 225 ++P +W L + L + +L ++L+ ++ D +T + NRR ++ Sbjct: 749 TSPRQWQPFEAELLTQLATQLAIAIQQSELHQQLQSTNQQLENLALIDQLTQIPNRRCFD 808 Query: 226 TMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDV 284 L + N R R +LL+ DID+FK NDT+GH GD + + + L+ + R SD+ Sbjct: 809 HDLERHWQNLARQKRPLSLLLCDIDYFKQYNDTYGHSGGDVCLTQVAQALKASARRASDL 868 Query: 285 IGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV---TLRISVGVAPLNPQ 341 + R+GG+EF +I+ T AI + + L LRLP+ + +S+G+A L P+ Sbjct: 869 VARYGGEEFVIILPDTDNFGAIAVAQNIQKTLKELRLPHRASGVSSYVTVSIGIATLIPR 928 Query: 342 MSHYR-EWLKSADLALYKAKKAGRNR 366 E + +AD ALY+AK GR+R Sbjct: 929 SDLPSIELINAADQALYQAKAQGRDR 954 >UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N773_9GAMM Length = 462 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 5/199 (2%) Query: 174 WWLSLPIIVIYPLLF---GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRN 230 W L +I + LF + Q +L ++L+ +S RD +TG++NR + + + Sbjct: 265 LWRMLIVIAVVVALFFYRYLLVNQHNRELQRVNKKLEQLSQRDHLTGIHNRYYLDQAFQQ 324 Query: 231 EFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGG 290 E +R+ T++++DID FK IND++GH VGD+ I + L+ +R DV+ R+GG Sbjct: 325 ELTRYKRYQHGFTIVMLDIDLFKQINDSYGHVVGDDVIKQIAMLLREHVRDQDVVARWGG 384 Query: 291 DEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLK 350 +EF ++ T + A T + + ++ + +S GV ++ Sbjct: 385 EEFLILNPETSLDGARTLAEHLRRLIRRTPF-TVDKIDVTVSFGVTDYRAG-EDIETMIQ 442 Query: 351 SADLALYKAKKAGRNRTEV 369 AD ALY+AK++GR++T V Sbjct: 443 RADSALYQAKQSGRDKTVV 461 >UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFS2_CARHZ Length = 543 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 62/166 (37%), Positives = 98/166 (59%), Gaps = 1/166 (0%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 RL+ ++ +D +TG+YNRR++ L E RRH + T++++DID+FK INDT+GHD G Sbjct: 374 RLKELAQKDELTGLYNRRYFLERLNEEHLRSRRHKLNYTIVLLDIDYFKKINDTYGHDCG 433 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL-NTLRLPN 323 D + R L+ TLR +D+ R+GG+EF V++ T + A R+ E + + + Sbjct: 434 DLVLNDFGRFLKDTLRRTDLSARYGGEEFVVLLPQTGKKEAYLLAERLREKVKERVLIFQ 493 Query: 324 TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 +V +S+G+A YRE L AD ALY+AK GR++ + Sbjct: 494 GQKVKYTVSMGLAAYPEDAEEYRELLSLADKALYQAKNRGRDKVVM 539 >UniRef50_A7BV03 Sensor protein n=2 Tax=Beggiatoa sp. PS RepID=A7BV03_9GAMM Length = 866 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 13/251 (5%) Query: 121 LPSTAMLMIMCLNLMGAGGPRLF--VAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSL 178 LP +L +M ++ G + L+ + L L + + + +++ Sbjct: 616 LPEVILLDVMMPDMTGFEVCQQLRKTPQYELIYIIMLTALTDSKYKIEGLDKGADDYVTK 675 Query: 179 PIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRH 238 P + L V +TA K E +T DG+T VYNR +++ L E +R+ Sbjct: 676 PFDISELLARIRVGERTAIKKRE--------ATIDGLTKVYNRNYFDMYLAQEVSRAKRY 727 Query: 239 NRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMS 298 R+ +L+I DID FK+INDT+GH GD + T+ + R SD++ RFGG+EF +++ Sbjct: 728 KRELSLIITDIDLFKNINDTYGHLTGDTVLQEFTQIIMQQCRRSDLVARFGGEEFIILLP 787 Query: 299 GTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYK 358 TP + R+ + ++ + S GVA L RE L+ AD ALY+ Sbjct: 788 ETPLKGGTIVAERMCQRIDAHIFQEVEHI--TASFGVASLITDRDG-RELLRRADSALYQ 844 Query: 359 AKKAGRNRTEV 369 AKK GRN+ V Sbjct: 845 AKKNGRNQVVV 855 >UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEH9_DESAH Length = 341 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 3/176 (1%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 + +L + R L+ ++ D +TG++NRR + ML E RR+ L+++DID F Sbjct: 161 MERTRELEKKNRELEQIAIIDQLTGLFNRRKLDEMLSRELIRSRRYGNSFGLIMVDIDFF 220 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 K++NDT GH +GD+ + QL+ +R DV+GR+GG+EF +I T + I ++ Sbjct: 221 KTVNDTHGHQIGDQVLQRFADQLKQGVREVDVLGRWGGEEFLIICPETIKDYLILLAEKL 280 Query: 313 HEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + ++ +P + S GV + + D ALY AK+ GRNR E Sbjct: 281 RIAVQSIAVPGVGEK--TASFGVTVYEK-GDNLDTLVDKVDKALYLAKEKGRNRVE 333 >UniRef50_Q47FN5 Response regulator receiver modulated diguanylate cyclase n=3 Tax=Betaproteobacteria RepID=Q47FN5_DECAR Length = 313 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 5/200 (2%) Query: 173 EWWLSLPIIVIYPLLFGWVSYQTATK-LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNE 231 E L I + ++ S T+ L + L +S+ D +TGV NRR+++ + E Sbjct: 108 EIVLGAKIRAMQRIVLMRASLLAVTRKLDAANQELIRISSTDSLTGVANRRYFDEAMSIE 167 Query: 232 FDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGG 290 + RRH+ LL+ DID+FK NDT+GH GDE + + + R SD + R+GG Sbjct: 168 WRRARRHSNSIALLMCDIDYFKLYNDTYGHQAGDECLRKIAAAISRHTERPSDTVARYGG 227 Query: 291 DEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN--TPQVTLRISVGVAPLNPQMSH-YRE 347 ++FAVI+ T A+ ++ + L + + +P + +S+G+A P + + Sbjct: 228 EKFAVILPETSIGGALMVAEKIRQATKELNITHASSPTGQVGLSIGIASAAPGFDNPPDD 287 Query: 348 WLKSADLALYKAKKAGRNRT 367 + +AD ALY+AKK GR+R Sbjct: 288 LILAADKALYRAKKEGRDRV 307 >UniRef50_Q31E96 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E96_THICR Length = 775 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 107/195 (54%), Gaps = 9/195 (4%) Query: 180 IIVIYPLLFGWVSY------QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFD 233 ++ LL G ++ QT KL E ++L ++S D +TGVYNR++ + L +E + Sbjct: 580 VLAPILLLLGVFAFFNRKLRQTQKKLQETNKQLSILSVTDHLTGVYNRQYLDQRLDSEVE 639 Query: 234 NCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEF 293 R+ +++++D+D+FK +ND +GH VGDE +V + ++ +R D+ GR+GG+EF Sbjct: 640 RVNRYGSTFSVIMMDLDNFKKVNDKFGHLVGDEVLVVFAQTVEKEIRKIDIFGRWGGEEF 699 Query: 294 AVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSAD 353 +I TP AI +V + + + P ++ +S+GVA + L AD Sbjct: 700 ILICPETPLTHAIQLGKKVRKSIESQDYPEN--ISQTVSLGVAEYQTG-EAINDCLNRAD 756 Query: 354 LALYKAKKAGRNRTE 368 LYKAK+ GRN+ Sbjct: 757 QNLYKAKQLGRNQVC 771 >UniRef50_B5VVN4 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Arthrospira RepID=B5VVN4_SPIMA Length = 652 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 5/191 (2%) Query: 182 VIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 + P+ + KL + L+ +++ DG+TGV NRR ++ L+ E+ R Sbjct: 455 IATPIAVAIQQGELHAKLQTVNQELERLASLDGLTGVANRRQFDLHLKREWQRLLRETAP 514 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGT 300 ++++ D+D FK+ NDT+GH +GDE + + + L+ R +D+ R+GG+EF +++ T Sbjct: 515 ISVIMCDVDFFKAYNDTYGHQMGDECLKQIAKILENCAQRSTDLASRYGGEEFVIVLPNT 574 Query: 301 PAESAITAMLRVHEGLNTLRLPNTP---QVTLRISVGVAP-LNPQMSHYREWLKSADLAL 356 + A+ ++ + L + + + +S+GVA + +K AD AL Sbjct: 575 GIKGALQVADKIQHQIRALEIEHQKSEVSGYVTLSLGVACQVPNHDRSPESLIKLADAAL 634 Query: 357 YKAKKAGRNRT 367 Y+AK GRN Sbjct: 635 YEAKSKGRNCI 645 >UniRef50_Q47Y21 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y21_COLP3 Length = 722 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 2/174 (1%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 + Q ++ D +TG NR H+ +L E N H +++++DIDHFKS+ND Sbjct: 547 RKSQQDHFQQLALTDALTGAVNRHHFNEVLDQEIANVNNHGSPLSIMLLDIDHFKSVNDR 606 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 +GH VGDE +V + +R SDV+ R GG+EF +IM T +A R+ + + Sbjct: 607 YGHGVGDEVLVMFYQTCVEAVRSSDVVARIGGEEFVIIMPNTQLVNAQKFAERLRQKIAK 666 Query: 319 LRLP-NTPQVTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTEVA 370 L L Q+++ +S+GV+ + ++ ++ AD +LY+AK +GRN+ VA Sbjct: 667 LELNIANNQISVTVSIGVSQWQSEYFTNAETFVAHADKSLYQAKNSGRNKVVVA 720 >UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TG17_HELMI Length = 324 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 4/180 (2%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 + +L E R+LQ +S+ DG+TG+ NRR ++ L +E+ R+ +L++ DID F Sbjct: 136 LRVTAELEEAVRKLQNLSSLDGLTGLANRRRFDEYLASEWKRAIRNGTPISLILFDIDWF 195 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 K NDT+GH GD+ + A+ + + R SD++ R+GG+EFAVI+ T E A+ Sbjct: 196 KPYNDTYGHIQGDDCLKAIASLMPKVVRRSSDLVCRYGGEEFAVILPDTSQEGALAVAES 255 Query: 312 VHEGLNTLRLPN--TPQVTLRISVGVAPLNPQMSH-YREWLKSADLALYKAKKAGRNRTE 368 + E L+ + + +P + +SVGVA P S + AD ALY+AK+ GRNRT Sbjct: 256 IREALSEAGIEHRQSPLDRVTVSVGVATAYPSPSSEPVTLIGYADEALYEAKRQGRNRTV 315 >UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=2 Tax=Desulfovibrio RepID=B8DIR5_DESVM Length = 474 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 4/200 (2%) Query: 170 APLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLR 229 ++WL + + LL G V + +L L+ ++ D +T + NR + R Sbjct: 278 TSADYWLVARVAGFFALLVGVVLWYN-RRLKRMNAVLERLARTDPLTDLPNRSRLNELFR 336 Query: 230 NEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFG 289 E + +R+ R +++I+DIDHFK +ND GH GD + ++ ++RG+D +GR+G Sbjct: 337 REVERAQRYRRPFSIVILDIDHFKRVNDELGHLAGDRTLQVFAGVVRDSVRGTDTVGRWG 396 Query: 290 GDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWL 349 G+EF V+ T AE A+ R+ L + TL S GVA + L Sbjct: 397 GEEFLVLCPETTAEEAVQLAERLRGSLRATQFEGGRIHTL--SAGVAAFR-EGDSVDTLL 453 Query: 350 KSADLALYKAKKAGRNRTEV 369 AD ALY+AK GR+R EV Sbjct: 454 HRADTALYRAKNGGRDRVEV 473 >UniRef50_Q2BML0 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BML0_9GAMM Length = 577 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 3/256 (1%) Query: 112 WVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAP 171 + +G+ ++ C L G R F+ V ++S ++T V + + Sbjct: 314 YTAFIGIVPFALLMIIAGACACLNGVKEARYFLGAAVFAMISAVITAFTVSGIVEYKAIG 373 Query: 172 LEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNE 231 + +++ L ++YQ E Q ++ RD +TG+YNRR ++ ++ Sbjct: 374 FH-AVEYGMLIEAVLFALALAYQFRINQEEKVAA-QQLADRDQLTGLYNRRGFDKVMEPV 431 Query: 232 FDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGD 291 F N RH+R+ LL++DIDHFK+IND GH GD + L + LQ LR D+I R+GG+ Sbjct: 432 FGNAYRHHRELCLLVLDIDHFKAINDRHGHGYGDLVLTDLAKVLQHELRAGDLIARWGGE 491 Query: 292 EFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLK 350 EF +++ T A+T R+ ++ + Q +S+G+A L P + +++ L Sbjct: 492 EFLLLLPETNHMEAVTLAERLIRNISNREVEGDGVQEHYTVSIGIAELKPPIVSFKQLLV 551 Query: 351 SADLALYKAKKAGRNR 366 AD LY+AK+ GRN+ Sbjct: 552 EADKHLYRAKETGRNK 567 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 5/234 (2%) Query: 140 PRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVI--YPLLFGWVSYQTAT 197 R V G VV L +T + L+ L+ + V + Sbjct: 493 LRSVVEGTPWSVVLTLPVAGITASRLLGIIITLQLALTALFYFFGRERGVRDRVQQLLRS 552 Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L E L +T D +TG++NR + L E RR + +L++ D+DHFK +ND Sbjct: 553 ELQERAAALARQATTDPLTGLHNRLRFNEGLAQELARVRRTGQPLSLVMFDVDHFKEVND 612 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 +GH GD+ ++ L++ LR +D++ R+GG+EFA+++ +A+ + + Sbjct: 613 RYGHPTGDQVLIRLSQTAAAQLRQTDLLARWGGEEFAILLVDADLHAAVEVAENLRRLVA 672 Query: 318 TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 ++ S GVA P L+ AD ALY+AK GRNR E+ A Sbjct: 673 RTPFDQIG--SVTASFGVAECRPD-ESADSLLERADAALYRAKSNGRNRVEIDA 723 >UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW5_9GAMM Length = 274 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 3/178 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L L+ + D +TGV NR ++ET+L E R+ L++ D+DHFK Sbjct: 94 QVELELQRANAELKRQAYYDRLTGVANRHYFETLLNRELARADRYGAPFALVMFDLDHFK 153 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +NDT+GH GD + +TR + LR +DV+GR+GG+EF V++ GT A + Sbjct: 154 RVNDTFGHAAGDVVLQEVTRVIAERLRDADVLGRWGGEEFMVLLPGTQEADAARVAETMR 213 Query: 314 EGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + P + IS+GVA L+ D ALY+AK GRNR VAA Sbjct: 214 ARVEGHDFPEAG--RVTISLGVAAFCAGEPRTG-LLRRVDEALYRAKGEGRNRVAVAA 268 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 2/169 (1%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 + +++ + RDG+T +YNR ++ L E RR+N D +LL++D+DHFK +NDT+GH Sbjct: 319 KEVKLRADRDGLTRIYNRHSFDERLIYEIKRRRRYNHDLSLLMVDLDHFKQVNDTYGHKA 378 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP- 322 GD + + L T R +D+ R+GG+EF V++ T E+A R+ E + Sbjct: 379 GDMVLRKVGEILTETFRTTDLAARYGGEEFVVLLPHTSEEAAWKLAERIRESIQGCVFRF 438 Query: 323 NTPQVTLRISVGVAPLNPQM-SHYREWLKSADLALYKAKKAGRNRTEVA 370 + + ++ S+GVA + + + L AD ALYKAK GRN ++ Sbjct: 439 DGHEFSVTASIGVASVEAGALTRDDDLLIKADKALYKAKNNGRNMVVIS 487 >UniRef50_A3YBD7 Regulatory component of sensory transduction system n=1 Tax=Marinomonas sp. MED121 RepID=A3YBD7_9GAMM Length = 357 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 151/335 (45%), Gaps = 9/335 (2%) Query: 42 RLPRAVGLAGMFLPIASTLV-SHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPL-SREI 99 R G + + + V +++ ++PH+A+ A ++P E Sbjct: 12 YPIRVAGCLLVMMNVYIARVPELDSTHLLIWIILLLFIIYPHIAF--AKFVLNPTEKTEA 69 Query: 100 YNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLE 159 +L D G+ ++ N + + + G L GL+ ++ L+++ Sbjct: 70 NSLLVDMFAIGLMANLVYFNPVIFLPYYIANSAAIYAMKGISLVFKGLLAAIIGALISIP 129 Query: 160 LTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVY 219 + G + S + + ++S+ L + K + +V + D +T + Sbjct: 130 IFGFEYRMDMNLYALIPSFLYLFLATHYVSYLSHLRGVILNKAKAKAEVQANSDSITKIA 189 Query: 220 NRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL 279 NRR+++ L ++ + + ++L IDID FK+ ND +GH +GD+ + + + + ++ Sbjct: 190 NRRYFDRKLEEQWWRSYQSQQALSMLAIDIDFFKNYNDFYGHPLGDDCLNLVAQTIAGSV 249 Query: 280 -RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP---QVTLRISVGV 335 R SD++ R GG+EF +I+ T + A +V + L++ + + +S+GV Sbjct: 250 TRSSDLVARTGGEEFNIILPNTNLDGAYMVAKKVLAAIEALQIEHRGSDVSNVVTVSIGV 309 Query: 336 APLNPQMS-HYREWLKSADLALYKAKKAGRNRTEV 369 + + P S R + +AD ALY+AK+ GRNR V Sbjct: 310 SSIIPVASFSSRGLMLAADQALYQAKREGRNRISV 344 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 4/173 (2%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + RL+ + D +TG+YNRR++E L+ E RRH L++D DHFK INDTWGH Sbjct: 173 RERLKWLGLTDPLTGLYNRRYFEQRLQEEAQRTRRHGDPLACLMLDADHFKRINDTWGHQ 232 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 GD + L R+++ LRG DV R GG+EFAV++ TP R+ + + Sbjct: 233 AGDVVLKVLARRVRQQLRGCDVAARIGGEEFAVLLPSTPVRHVQLVAERIRLAIAGEPVH 292 Query: 323 NTPQ--VTLRISVGVAPLNPQMSH--YREWLKSADLALYKAKKAGRNRTEVAA 371 +P + + +S+G A L P + + AD ALY+AK+ GRNRT +AA Sbjct: 293 VSPDCVLQVSVSLGAAMLAPGAADISPERLMARADAALYQAKRNGRNRTMLAA 345 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 4/219 (1%) Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMST 211 + +V + + +T + + L + ++ + L + + E ++ +S Sbjct: 279 LIVVVGVGMDAVTAPWQAQWLAGAATSVVLCLLILGAAVALRREMLRRFEIEQEFLRLSQ 338 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 D +TG+ NRRH++ + E+ R +L++DIDHFK +ND GH GD + + Sbjct: 339 TDSLTGLPNRRHFDEFGQREWQRAARQRSSIAVLMVDIDHFKQVNDRIGHPGGDRVLREV 398 Query: 272 TRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLR 330 + ++ +L R D GR+GG+EFA+I+ T A +A R+ + + Sbjct: 399 SDIIRASLHRPGDFAGRYGGEEFAIILPETDAPAAAHVAERIRAAIEANTAEGVAP--VT 456 Query: 331 ISVGVAP-LNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 +S+G+A L E + +AD ALY+AK+ GRNR Sbjct: 457 VSIGLAAGLAAPKGTLAEMMIAADHALYRAKETGRNRVV 495 >UniRef50_C1XM61 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XM61_MEIRU Length = 609 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 60/179 (33%), Positives = 102/179 (56%), Gaps = 2/179 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + KL + L+ ++ +D +T + NRR+ E L EF +R+ ++ ++DIDHFK Sbjct: 432 RLLDKLRQQSAELERLARQDPLTRLNNRRYLEENLEREFAAAKRYKFPISVALVDIDHFK 491 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 INDT+ H VGD+ + + + L+ + RG D R+GG+EFA++ T A+ A R+ Sbjct: 492 QINDTFSHQVGDDVLRIVGQILEASCRGVDFAARYGGEEFALVFPQTDLPGALIACERIR 551 Query: 314 EGLNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + P + + +S+GV+ +P + ++ + L +AD LY AK+AGRNR AA Sbjct: 552 QRIEQHNWAALHPDLKVTVSIGVSS-DPSLPNHEKLLAAADEQLYAAKRAGRNRVCPAA 609 >UniRef50_B2A6L1 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6L1_NATTJ Length = 340 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 103/186 (55%), Gaps = 14/186 (7%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 +T L E ++ + ++T D +T + NRR ++ +R E+ R+ + +++++DID+FK Sbjct: 148 KTLKLLEETNKKFEKLATIDELTQLANRRLFDETMRGEWRRANRNGYNLSIILLDIDYFK 207 Query: 254 SINDTWGHDVGDEAIVALTRQLQ-ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 + ND +GH GDE + A+ ++L+ + +R D R+GG+EFAVI+ T A + ++ Sbjct: 208 NFNDAYGHQAGDECLKAIAKKLKFLMMRPGDFAARYGGEEFAVILPETDLRGAHSVAEKI 267 Query: 313 HEGLNTLRLPNTPQ---VTLRISVGVAPLN----------PQMSHYREWLKSADLALYKA 359 +G+ L++P+ + +S+GVA + + ++ AD ALYKA Sbjct: 268 RQGIEELKIPHCDSKVAQYVTVSLGVASADLKNCQGGRDQATDDEIKILIEHADEALYKA 327 Query: 360 KKAGRN 365 K GRN Sbjct: 328 KDNGRN 333 >UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384142 Length = 445 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 1/178 (0%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + T+ + L ++++D +TG+ NRRH+ E R +L++D+DHFK Sbjct: 267 EDVTETKRLQEELTRLASQDSLTGIANRRHFLERAHTEIIRAGRAKTPLAVLMLDVDHFK 326 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 IND +GH GD A+ AL + TLR +D+ GR GG+EF ++ G +A A R+ Sbjct: 327 KINDEYGHAAGDAALKALADTCRSTLRETDLFGRLGGEEFGILFPGDDLNAATEAAERLR 386 Query: 314 EGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + ++ + + S+G++ L L AD ALY AK+AGRNR E++ Sbjct: 387 LAIAATKITIGGATIAITASLGLSLLQDGEKSIDAALSRADQALYVAKQAGRNRLEIS 444 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 3/176 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T +L E R L+ ++ D +TG+ NRR ++ L E RR +++++DID FK Sbjct: 433 TLRELEEKNRELEQLNMEDPLTGIKNRRFFDKKLVMELRRSRREQTPLSVIMLDIDKFKV 492 Query: 255 INDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 INDT+GH GD+ I ++ L R D + R+GG+EF V++ T + AI ++ Sbjct: 493 INDTYGHLTGDQVIRTAADTIKKQLQRPLDEVARYGGEEFVVLLPNTQNDGAIAIAEKIR 552 Query: 314 EGLNTLRLP-NTPQVTLRISVGV-APLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + T + ++ IS GV + +++ + + AD ALY AK+ GRN+ Sbjct: 553 HAIATNNVHVAGTTISFTISAGVYTSVAEDINNPEIFTERADKALYFAKQHGRNQV 608 >UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRL2_PSYIN Length = 611 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 81/330 (24%), Positives = 139/330 (42%), Gaps = 16/330 (4%) Query: 41 VRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVL-VGWAFVWPHLAWQIASRAVDPLSREI 99 + + L I +L+ + +L + + +P + W I + I Sbjct: 293 IDRLLQLIFVVAGLSIFFSLIGYRDYAVILGLLSMLTSIFFPVIGWVIYLKGRSYARFYI 352 Query: 100 YNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLE 159 W M + VL M+ + + + G + ++S L Sbjct: 353 LGWSI-------WSLGMILAVLQHIGMIPVTLYSDLSTG----LCFSIEAALLSF--ALA 399 Query: 160 LTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVY 219 + +E + LL V+ +T +L + K R ++++ D +T + Sbjct: 400 DRFNQLRNEKEEIELIHIEHLKNDQQLLEQLVTERTE-ELEQAKDRAELLARTDPLTNML 458 Query: 220 NRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL 279 NRR + E R+ +++ID+DHFKSIND +GH GD A++++ L+ + Sbjct: 459 NRRAFFECGSVEIKRSLRYKSSLAIMMIDLDHFKSINDNYGHAAGDNALLSVANTLKAMI 518 Query: 280 RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR-LPNTPQVTLRISVGVAPL 338 R D+IGR GG+EFAVI+ E A R+ G+ + + + V + GV + Sbjct: 519 RNVDIIGRIGGEEFAVIIPHADLEIATELAQRLRLGIEKVEIIIDNQPVKITACFGVTSI 578 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + E LK AD ALY AK+ GRNR E Sbjct: 579 DIKSESLDEALKRADKALYLAKENGRNRVE 608 >UniRef50_D1U463 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U463_9DELT Length = 974 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 1/182 (0%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 + T+ +R ++ ++T D +TG NR + + E R+ +L++ Sbjct: 791 LLYSVIHDITERVRLEREMKRLATTDSLTGAANRHEFFRLAELELRRAMRYGHSLAVLML 850 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DID+FKSINDT GH GD + AL+ ++ TLR +D+ GR GG+EFA ++ T + Sbjct: 851 DIDYFKSINDTHGHQTGDAVLKALSALVRTTLRDTDIFGRLGGEEFAAVLPETDLAGGVL 910 Query: 308 AMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R+ L L++ +V +S+G+ + + AD A+YKAK+ GRNR Sbjct: 911 VADRLRRELGALKVRLRDIEVMFTVSIGLTETRKSERLIDDAINRADEAMYKAKRMGRNR 970 Query: 367 TE 368 E Sbjct: 971 VE 972 >UniRef50_C1D915 GGDEF domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D915_LARHH Length = 879 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 3/181 (1%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRH--NRDATLLIIDID 250 ++ H+ L ++ DG+TG+ NRR W E CRR+ D ++++DID Sbjct: 688 LNDISERKAHEDDLVKQASTDGLTGLANRRSWLVHANRELTRCRRYPDEADCAVVMLDID 747 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFK +ND+ GH VGD+ + L R++Q LR +D +GR GG+EFA+++ T + A Sbjct: 748 HFKRVNDSHGHAVGDQVLQELARRMQAGLRETDCLGRMGGEEFAILLPQTSQDGACLFAE 807 Query: 311 RVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 R+ + + + + IS+GV+ + + L AD ALY AK GRNR E Sbjct: 808 RLCRKIAGVPFATEAGALVVTISLGVSQMQSDDASVDCALARADGALYAAKSGGRNRVEA 867 Query: 370 A 370 A Sbjct: 868 A 868 >UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluorescens RepID=Q4KF29_PSEF5 Length = 523 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 11/257 (4%) Query: 121 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPI 180 LP M +++ L + + + ++ + + + Sbjct: 249 LPEATTGNAMITSIVDGVTRLYGYRQLQAYPLVVAAANSKDSVLKGWYASAYQSTAIVAL 308 Query: 181 IVIYPLLFGWVSYQTAT-------KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFD 233 +++ LFGWV Q L E + L+V++T D +TG+ NRR +E L EF Sbjct: 309 VLLGVGLFGWVFVQQVRNNERIEADLREAQEALEVIATHDSLTGLANRRLFERALTVEFG 368 Query: 234 NCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDE 292 R +L+++DID+FK NDT+GH GD + + + L+ R +D+ R+GG+E Sbjct: 369 RGARQRSPLSLVMVDIDYFKRYNDTYGHVAGDHCLTEVAQALKGCCQRKADLAVRYGGEE 428 Query: 293 FAVIMSGTPAESAITAMLRVHEGLNTLRLPN--TPQVTLRISVGVAPLNPQM-SHYREWL 349 FAV++ T A+ ++ + + + +P + +S+G P ++ Sbjct: 429 FAVLLPDTDIHGALAMAEQIRRSVMQRNIAHSGSPVGCVTVSLGCYAFVPTGRDSIEMFI 488 Query: 350 KSADLALYKAKKAGRNR 366 + AD ALY+AK GRNR Sbjct: 489 ERADAALYQAKATGRNR 505 >UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YHX9_9CYAN Length = 676 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 24/228 (10%) Query: 167 FNSAPLEWWLSLPIIVI-YPLLFGWVSYQTATKLAEHKRRL------------------- 206 ++P L +P+I L ++S+ KL E++++L Sbjct: 448 IENSPSISHLCIPMIAQGEALGILYLSFLEVDKLNENQQQLGIMFARSIGLALANLQLRE 507 Query: 207 --QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 + S RD +T ++NRR+ E L E + R+ +L+IDIDHFK NDT+GHD G Sbjct: 508 SLRYQSIRDPLTTLFNRRYMEESLTREINRVTRNTYPIGILMIDIDHFKQFNDTYGHDTG 567 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 D + A+ LQ +RGSD+ R+GG+E +I+ + ++ EG+ L+L Sbjct: 568 DSVLKAIGHFLQSQVRGSDIACRYGGEELILILPEVNLKETQNRAEQIREGVKKLQLKRG 627 Query: 325 PQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 Q + +S+GVA Q +++AD ALYKAK+ GR++ VA Sbjct: 628 SQKLNEITVSIGVACFPDQGLTGEIVIQAADAALYKAKEQGRDQVVVA 675 >UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UB95_XANAL Length = 595 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 103/188 (54%), Gaps = 4/188 (2%) Query: 187 LFGWVSYQTATKLAEH--KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 L V+ Q A L + RL+ S RD +TG+YNRR+ E L E C R + L Sbjct: 393 LVEVVAEQLAMALHNLHLRHRLRTQSIRDPLTGLYNRRYLEESLLRELSRCARRDLPLAL 452 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 +++D+DHFK++ND +GH GD + A + L +R D+ R+GG+EF VI+ G A+ Sbjct: 453 MMLDLDHFKALNDRFGHAGGDALLAAFGQLLGGLVRPEDIACRYGGEEFTVILPGAAADV 512 Query: 305 AITAMLRVHEGLNTLRLPNTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 A ++ + +++ + Q+ ++ +S+GVA S E L+ AD ALY K++ Sbjct: 513 AQRRAEQIRAAVEQMQVQHHGQMLPSITVSIGVAAYPEHGSTGEELLRCADAALYCGKRS 572 Query: 363 GRNRTEVA 370 GRNR A Sbjct: 573 GRNRVASA 580 >UniRef50_A4BG19 GGDEF domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BG19_9GAMM Length = 377 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 82/368 (22%), Positives = 154/368 (41%), Gaps = 20/368 (5%) Query: 14 KAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLP-IASTLVSHPPPGWWWLV 72 K + +++ + RR+ + L G + + W L Sbjct: 5 KTLSWRFIERFMHAGTTEQTDIETVRRISVLNLFALVGFSISFLLGVQAILSQDIWLALA 64 Query: 73 LVGWA--FVWPHL---------AWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVL 121 L F++ H+ A+ A+R V L + L G + V +L Sbjct: 65 LFTAFALFLFAHIQLRIKRNQSAFLFAARLVQ-LVLFVLCLYLVYAGGANQTGPLWVYLL 123 Query: 122 PSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPII 181 P M L+ + G + L +++ L + S+ + S + Sbjct: 124 PPVVMF----LSGLKRGMMITALFVLGYLIIVFFPGNALGAVDYSYEFKTRLLY-SFLTL 178 Query: 182 VIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 ++ + KL E K+ + +++D +T + NRR +R E +R+N+ Sbjct: 179 TFLAAVYEQSRQSSYQKLNELKQDFERQASQDTLTHLLNRRGMRERIRYEVRRSQRNNQP 238 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 T ++ D+DHFK IND +GHD GD ++ +++ LQ ++R D I R+GG+EF ++ T Sbjct: 239 ITFILADLDHFKEINDHYGHDTGDTVLIQVSQLLQDSVRQQDSIARWGGEEFLFLLPETN 298 Query: 302 AESAITAMLRVHEGLNTLRL-PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 A A+ ++ + + L + P +T +S G+A + + +++ + AD LY+AK Sbjct: 299 ARQAMQLAEKIRSIIESHPLNSDQPPLTTTMSFGIAEML-DLENHQSTIAEADNRLYQAK 357 Query: 361 KAGRNRTE 368 GRN Sbjct: 358 SQGRNCVV 365 >UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H488_METFK Length = 469 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 142/332 (42%), Gaps = 31/332 (9%) Query: 66 PGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLA----GMWVGVMGVNVL 121 +W G+ + +A++ A+ + L+R I T + G+ V ++ +N Sbjct: 116 GAYWQFGFCGFIII--AMAFRKATESFPQLNRIILGKNTVPFMLTPLLGIIVYMLALNAG 173 Query: 122 PSTAMLMIMCLNLMGAGGPRLFVAGLVLMVV------------SCLVTLELTGI----TV 165 + +M + G ++ V+ L L+ + + Sbjct: 174 NLFSAIMSSSPIVTAPLGWGSWIMAAATFVLVRAFCSDDKLVTIFLSIAALSHLCHVSHL 233 Query: 166 SFNSAPLE---WWLSLPIIVIYPLLFGWVSYQTA---TKLAEHKRRLQVMSTRDGMTGVY 219 ++ P + L + + L + Q + LA+ L + +D +TG+Y Sbjct: 234 LIDNTPFSANWYMAHLLSLFSFTTLLAVLILQLSQFTRDLADSHAYLMEKAHKDSLTGIY 293 Query: 220 NRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL 279 NR +++ E+ +R+ +LL++DIDHFK ND +GH GD+ + + + L + Sbjct: 294 NRGYFDETAELEWRRAQRNGTPISLLMLDIDHFKGYNDQFGHVKGDKCLKKIAQALHANM 353 Query: 280 -RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPL 338 R D + RFGG+EF V++ T AE ++H + L++ + +S+G A Sbjct: 354 QRPGDFVARFGGEEFVVLLPATTAEGCHAMAQKLHLAVQKLKISAGDHRRVSVSIGHATW 413 Query: 339 NP--QMSHYREWLKSADLALYKAKKAGRNRTE 368 N + E L ADLALY AK+ GRNR Sbjct: 414 NGPYENGSINELLSQADLALYTAKRLGRNRIV 445 >UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUP2_DESOH Length = 1644 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 58/168 (34%), Positives = 97/168 (57%), Gaps = 2/168 (1%) Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 L + DG+TG+YN +++ ML+ E +R R+ ++++IDIDHFK NDTWGH G Sbjct: 1476 ELSRKAVTDGLTGLYNHDYFQNMLQQELLLAKRKGRELSMIMIDIDHFKRFNDTWGHQAG 1535 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 D + + +++ + R SDV+ R+GG+E A+++ T E+A ++ + LR+ + Sbjct: 1536 DMVLREVAAEIRESCRSSDVVARYGGEEMALLLHETGPEAAFALAEKIRRRVEALRVEHA 1595 Query: 325 PQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 P + + IS+GVA + + +K AD ALY +K GRN +A Sbjct: 1596 PGEYLQVTISLGVAGFPIHAKNKKPLVKKADDALYSSKAGGRNMVTLA 1643 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 4/185 (2%) Query: 188 FGWVSYQT--ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 F VSYQ A A ++ +S D +TG++N + +L E +R R +LL Sbjct: 205 FQTVSYQLGLAIDNARLYETVRRLSIYDPLTGLFNHGQFYNLLAEELSRHQRTGRPLSLL 264 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA 305 ++DIDHFK +NDT+GH GD + L+ L+ R D + R+GG+E A+I+ T E+A Sbjct: 265 MLDIDHFKKVNDTYGHRAGDAVLQQLSGLLKKQARAIDRVCRYGGEELALILPETDREAA 324 Query: 306 ITAMLRVHEGLNTLRLP--NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAG 363 R+ + ++ + +S+G A + +AD ALY AK+AG Sbjct: 325 RQTAERLRRHVEKCCFATCGQQEIGVTVSIGAATCPDAAISAETLVNAADRALYAAKRAG 384 Query: 364 RNRTE 368 RNR Sbjct: 385 RNRVC 389 >UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVY6_CHLT3 Length = 440 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 3/178 (1%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 ++ E L M D T ++N RH++ E +R N +L++ID+D FK N Sbjct: 259 KEVEEKTNELNQMVITDEKTKLFNFRHFKQEFLIEVARAKRFNEPLSLIMIDVDKFKHYN 318 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 DT GH +GD+ ++ ++ L+ R +DV RFGG+EFA ++ T A+ A R+ + Sbjct: 319 DTNGHMLGDQVLIKVSALLKKECRETDVPARFGGEEFAALLPRTDAKEAFQVAERIRSSI 378 Query: 317 NTLRLPN---TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 T N P L S+GVA + +AD ALY+AK+ GRNR EV + Sbjct: 379 ETSEFENQKAQPGGNLTASLGVATFPFDAYDAEALIIAADEALYRAKENGRNRVEVYS 436 >UniRef50_A8FZW4 Sensory transduction system, regulatory protein n=4 Tax=Shewanella RepID=A8FZW4_SHESH Length = 546 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 12/235 (5%) Query: 144 VAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLL-----FGWVSYQTATK 198 ++ V S +E G + ++ L IY +L Q Sbjct: 288 RQWTIVAVPSTGYVVERRGKLPYMIAIFGGLFVLLGASYIYAILRRSELIESEVEQRTHD 347 Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L E KR+L+ +S DG+T + NRR ++ L+ + R L++IDIDHFK NDT Sbjct: 348 LNEAKRKLEELSQTDGLTKIPNRRCFDETLQALWQKAIREESKIGLMMIDIDHFKLYNDT 407 Query: 259 WGHDVGDEAIVALTRQLQITLR-GSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 +GH GD+ + + + L TL +D++ R+GG+EF V++ T ++ R + Sbjct: 408 YGHLAGDQCLREVAQALSQTLNLNTDLVARYGGEEFVVLLPDT--RDCLSPAKRCQYNIE 465 Query: 318 TLRLPNTPQVT---LRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRTE 368 L LP+ +T + +S+GVA ++P Q S + ADLALY+AK +GRNR Sbjct: 466 RLGLPHNSSLTSEFITVSIGVASISPTQDSDLVDLTTQADLALYEAKNSGRNRVC 520 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AAP2 Protein adrA n=103 Tax=Enterobacteriaceae RepID=... 449 e-125 UniRef50_C4UJR8 Diguanylate cyclase n=4 Tax=Enterobacteriaceae R... 399 e-110 UniRef50_A8GB07 Diguanylate cyclase n=7 Tax=Enterobacteriaceae R... 394 e-108 UniRef50_C1M7K1 Diguanylate cyclase AdrA n=9 Tax=Gammaproteobact... 387 e-106 UniRef50_C6CCW8 Diguanylate cyclase n=3 Tax=Enterobacteriaceae R... 370 e-101 UniRef50_C6DCM6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae R... 362 8e-99 UniRef50_B1J1G5 Diguanylate cyclase n=17 Tax=Pseudomonas RepID=B... 362 1e-98 UniRef50_B2JNN3 Diguanylate cyclase n=1 Tax=Burkholderia phymatu... 355 2e-96 UniRef50_B3PC25 YaiC/YhcK/ArdA family protein n=1 Tax=Cellvibrio... 351 2e-95 UniRef50_C7HYH7 Diguanylate cyclase n=1 Tax=Thiomonas intermedia... 346 8e-94 UniRef50_A4WAF6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae R... 335 2e-90 UniRef50_C6CCY7 Diguanylate cyclase n=2 Tax=Enterobacteriaceae R... 328 2e-88 UniRef50_C5T000 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 325 2e-87 UniRef50_Q6FA46 Putative uncharacterized protein n=1 Tax=Acineto... 319 8e-86 UniRef50_A9C166 Diguanylate cyclase n=3 Tax=Comamonadaceae RepID... 316 6e-85 UniRef50_B5RJW5 MASE2 domain/diguanylate cyclase n=2 Tax=Klebsie... 315 2e-84 UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 312 1e-83 UniRef50_B4SNB1 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 306 8e-82 UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 299 9e-80 UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID... 293 1e-77 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 292 2e-77 UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax... 288 2e-76 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 287 5e-76 UniRef50_C5T8S9 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 280 4e-74 UniRef50_UPI0001C3940A response regulator receiver modulated dig... 280 5e-74 UniRef50_Q2SPL7 Response regulator containing a CheY-like receiv... 279 1e-73 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 278 2e-73 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 277 4e-73 UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (... 276 8e-73 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 276 1e-72 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 274 3e-72 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 274 4e-72 UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors... 274 4e-72 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 273 5e-72 UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepI... 273 9e-72 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 272 1e-71 UniRef50_A3YBD7 Regulatory component of sensory transduction sys... 272 2e-71 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 272 2e-71 UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece ... 271 3e-71 UniRef50_Q2BMK3 Serine/threonine kinase with two-component senso... 270 4e-71 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 270 4e-71 UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 270 4e-71 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 270 5e-71 UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthono... 270 5e-71 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 270 5e-71 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 270 6e-71 UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobac... 269 1e-70 UniRef50_B8FCK6 Response regulator receiver modulated diguanylat... 269 1e-70 UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 269 1e-70 UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 268 2e-70 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 268 2e-70 UniRef50_A0YVI7 Regulatory components of sensory transduction sy... 268 2e-70 UniRef50_Q0F205 Response regulator containing a CheY-like receiv... 268 3e-70 UniRef50_B7K319 Response regulator receiver modulated diguanylat... 267 5e-70 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 267 6e-70 UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales Rep... 267 6e-70 UniRef50_A0YNV2 Regulatory component of sensory transduction sys... 267 6e-70 UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrery... 267 6e-70 UniRef50_A4BG19 GGDEF domain protein n=1 Tax=Reinekea blandensis... 266 8e-70 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 266 1e-69 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 266 1e-69 UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor d... 266 1e-69 UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testostero... 266 1e-69 UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 T... 266 1e-69 UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 265 1e-69 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 265 2e-69 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 265 2e-69 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 265 2e-69 UniRef50_B7KGV0 Response regulator receiver modulated diguanylat... 265 2e-69 UniRef50_B5VVN4 Response regulator receiver modulated diguanylat... 265 2e-69 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 265 2e-69 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 265 2e-69 UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=P... 265 3e-69 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 264 3e-69 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 264 4e-69 UniRef50_B7K273 Response regulator receiver modulated diguanylat... 264 4e-69 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 264 4e-69 UniRef50_B4B7Z8 Response regulator receiver modulated diguanylat... 264 4e-69 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 264 4e-69 UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 263 5e-69 UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum al... 263 5e-69 UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 263 5e-69 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 263 6e-69 UniRef50_A7BWA5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Be... 263 6e-69 UniRef50_Q04S93 GGDEF domain receiver component of a two-compone... 263 6e-69 UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 263 7e-69 UniRef50_C0QMB4 ABC-type nitrate/sulfonate/bicarbonate transport... 263 7e-69 UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3... 263 7e-69 UniRef50_A3J836 Putative diguanylate cyclase (GGDEF domain) n=1 ... 263 7e-69 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 263 8e-69 UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 263 9e-69 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 262 1e-68 UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 262 1e-68 UniRef50_Q1Q3F0 Putative uncharacterized protein n=1 Tax=Candida... 262 1e-68 UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legione... 262 1e-68 UniRef50_Q47FN5 Response regulator receiver modulated diguanylat... 262 2e-68 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 262 2e-68 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 262 2e-68 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 262 2e-68 UniRef50_Q0VQ38 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q... 262 2e-68 UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepI... 262 2e-68 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 262 2e-68 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 262 2e-68 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 262 2e-68 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 262 2e-68 UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwell... 262 2e-68 UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 262 2e-68 UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain prote... 262 2e-68 UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 262 2e-68 UniRef50_A1WTZ7 Response regulator receiver modulated diguanylat... 261 2e-68 UniRef50_B1XII1 PleD protein n=3 Tax=Bacteria RepID=B1XII1_SYNP2 261 2e-68 UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthono... 261 3e-68 UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 261 3e-68 UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzer... 261 3e-68 UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 261 3e-68 UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=... 261 3e-68 UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae R... 261 3e-68 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 261 3e-68 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 261 3e-68 UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus L... 261 3e-68 UniRef50_A4BIU7 Response regulator containing a CheY-like receiv... 261 3e-68 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 261 4e-68 UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 260 4e-68 UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flag... 260 4e-68 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 260 4e-68 UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromato... 260 5e-68 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 260 5e-68 UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio... 260 6e-68 UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 260 6e-68 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 260 7e-68 UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 260 7e-68 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 260 8e-68 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 260 9e-68 UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthono... 259 9e-68 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 259 9e-68 UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammapr... 259 1e-67 UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 259 1e-67 UniRef50_B0C2A7 Diguanylate cyclase (GGDEF domain), putative n=4... 259 1e-67 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 259 1e-67 UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammap... 258 2e-67 UniRef50_Q31LE3 Diguanylate cyclase with GAF sensor n=2 Tax=Syne... 258 2e-67 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 258 2e-67 UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121... 258 2e-67 UniRef50_UPI0001AF38B9 GGDEF domain-containing protein n=1 Tax=P... 258 2e-67 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 258 2e-67 UniRef50_B7KCD2 Diguanylate cyclase with PAS/PAC and GAF sensors... 258 3e-67 UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteoba... 258 3e-67 UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluores... 258 3e-67 UniRef50_B2A6L1 Response regulator receiver modulated diguanylat... 258 3e-67 UniRef50_A1TWZ7 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 258 3e-67 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 258 3e-67 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 258 3e-67 UniRef50_Q0F307 Sensory transduction system regulatory protein n... 258 3e-67 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 258 3e-67 UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain... 258 3e-67 UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B... 258 3e-67 UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 258 3e-67 UniRef50_B0SEM7 GGDEF domain protein n=2 Tax=Leptospira biflexa ... 257 4e-67 UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7... 257 4e-67 UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein... 257 4e-67 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 257 5e-67 UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacte... 257 5e-67 UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thioox... 257 5e-67 UniRef50_Q2BP76 GGDEF domain protein n=1 Tax=Neptuniibacter caes... 257 5e-67 UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Synt... 257 6e-67 UniRef50_A1STZ3 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 257 6e-67 UniRef50_Q3A8D4 Putative sensory transduction system, regulatory... 257 7e-67 UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 256 8e-67 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 256 9e-67 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 256 9e-67 UniRef50_A8UWP4 Response regulator containing a CheY-like receiv... 256 9e-67 UniRef50_D2M3Q6 Diguanylate cyclase n=1 Tax=Rhodopseudomonas pal... 256 9e-67 UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobac... 256 1e-66 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 256 1e-66 UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 255 1e-66 UniRef50_Q21HV6 Response regulator receiver modulated diguanylat... 255 1e-66 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 255 2e-66 UniRef50_Q1K485 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 255 2e-66 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 255 2e-66 UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocy... 255 2e-66 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 255 2e-66 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 2e-66 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 255 2e-66 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 255 3e-66 UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curviba... 255 3e-66 UniRef50_B5JXY3 Ggdef domain protein n=1 Tax=gamma proteobacteri... 254 3e-66 UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii ... 254 3e-66 UniRef50_Q1NKN5 GGDEF:Response regulator receiver n=1 Tax=delta ... 254 3e-66 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 254 3e-66 UniRef50_Q1IJ19 Diguanylate cyclase n=1 Tax=Candidatus Koribacte... 254 4e-66 UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geob... 254 5e-66 UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 253 5e-66 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 253 5e-66 UniRef50_A5UW82 Diguanylate cyclase n=2 Tax=Roseiflexus RepID=A5... 253 5e-66 UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliob... 253 6e-66 UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobiu... 253 6e-66 UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain prote... 253 6e-66 UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 253 6e-66 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 253 6e-66 UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrl... 253 7e-66 UniRef50_D2BVU6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 7e-66 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 253 8e-66 UniRef50_Q47I66 Response regulator receiver modulated diguanylat... 253 8e-66 UniRef50_B8GR45 Diguanylate cyclase with PAS/PAC sensor n=27 Tax... 253 8e-66 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 1e-65 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 253 1e-65 UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 252 1e-65 UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclas... 252 1e-65 UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax... 252 1e-65 UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 252 1e-65 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 252 1e-65 UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thala... 252 1e-65 UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing pr... 252 2e-65 UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium... 252 2e-65 UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica R... 252 2e-65 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 251 2e-65 UniRef50_B7GIF3 Response regulator with a diguanylate cyclase ou... 251 2e-65 UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 2e-65 UniRef50_Q0G1R3 Periplasmic sensor diguanylate cyclase (GGDEF) n... 251 2e-65 UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 251 2e-65 UniRef50_D1SQW2 Diguanylate cyclase n=1 Tax=Acidovorax avenae su... 251 3e-65 UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing pr... 251 3e-65 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 251 3e-65 UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobact... 251 3e-65 UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax... 251 3e-65 UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 251 3e-65 UniRef50_Q3SFL9 Putative diguanylate cyclase (GGDEF domain) n=1 ... 251 3e-65 UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors... 251 3e-65 UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 251 3e-65 UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptu... 251 3e-65 UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanoph... 251 4e-65 UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum ... 251 4e-65 UniRef50_Q2BML0 Putative diguanylate cyclase (GGDEF domain) n=1 ... 251 4e-65 UniRef50_Q1N3P2 Probable two-component response regulator n=1 Ta... 251 4e-65 UniRef50_D1U6K0 Diguanylate cyclase with PAS/PAC sensor and heme... 251 4e-65 UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=... 251 4e-65 UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burk... 250 4e-65 UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnet... 250 4e-65 UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuni... 250 4e-65 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 250 4e-65 UniRef50_B9MBS6 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 250 4e-65 UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepI... 250 5e-65 UniRef50_Q3JJL8 GGDEF domain protein n=52 Tax=Burkholderia RepID... 250 5e-65 UniRef50_A9AKV8 Diguanylate cyclase n=24 Tax=Burkholderia RepID=... 250 5e-65 UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curviba... 250 5e-65 Sequences not found previously or not previously below threshold: UniRef50_B7K7K5 Diguanylate cyclase n=2 Tax=Cyanobacteria RepID=... 259 1e-67 UniRef50_B4B6I9 Response regulator receiver modulated diguanylat... 255 3e-66 UniRef50_B2IVB0 Diguanylate cyclase/phosphodiesterase with GAF s... 253 8e-66 UniRef50_B8FHG3 Response regulator receiver modulated diguanylat... 253 9e-66 UniRef50_Q3A1L9 FOG: GGDEF domain containing protein n=1 Tax=Pel... 251 2e-65 >UniRef50_P0AAP2 Protein adrA n=103 Tax=Enterobacteriaceae RepID=ADRA_ECOL6 Length = 371 Score = 449 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 371/371 (100%), Positives = 371/371 (100%) Query: 1 MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTL 60 MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTL Sbjct: 1 MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTL 60 Query: 61 VSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNV 120 VSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNV Sbjct: 61 VSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNV 120 Query: 121 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPI 180 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPI Sbjct: 121 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPI 180 Query: 181 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR 240 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR Sbjct: 181 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR 240 Query: 241 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT 300 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT Sbjct: 241 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT 300 Query: 301 PAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 PAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK Sbjct: 301 PAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 Query: 361 KAGRNRTEVAA 371 KAGRNRTEVAA Sbjct: 361 KAGRNRTEVAA 371 >UniRef50_C4UJR8 Diguanylate cyclase n=4 Tax=Enterobacteriaceae RepID=C4UJR8_YERRU Length = 372 Score = 399 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 152/361 (42%), Positives = 226/361 (62%) Query: 10 NFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWW 69 F K G + L + ++SG+ FA+R+ +PR GL L + S L++ P W Sbjct: 11 AFLKIRLNWGHQLSLYSRANSRQSGVHFAKRIYIPRIFGLGIGMLCVTSVLITQAMPVWI 70 Query: 70 WLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMI 129 WL+L+ +WPH+A+Q++ A P +E+ NL D++L G WV VM N LPS +L + Sbjct: 71 WLLLMINGLIWPHVAYQLSINADFPHRQELINLSIDSILGGTWVAVMSFNALPSVVILSM 130 Query: 130 MCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFG 189 M +N + +GG LF+ GL+L + S L+ L ++ + + + LP+I IYP L G Sbjct: 131 MSMNNIASGGKSLFIKGLLLQISSSLLVFWLFNLSFQPETTISQVYSCLPMIFIYPSLLG 190 Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 WV++ TA +L E+K L +S RDG+TG+YNRRHWE L N+FD+CRR+ ++L++IDI Sbjct: 191 WVTFHTAKRLVENKEELLRISVRDGLTGLYNRRHWEHQLHNQFDSCRRYKHCSSLVLIDI 250 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 D FK+INDT+GH VGD+AI L +L + LR D++GR+GGDEF I+ T AE A + Sbjct: 251 DQFKTINDTYGHTVGDDAITVLAEELLLGLRAIDIVGRYGGDEFGAILPNTTAEQAREVL 310 Query: 310 LRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 R+ L + +P + L+IS GVA P+M++Y++WLK+ D ALY AK GR+R E+ Sbjct: 311 TRIQGKLAEIEFKQSPGLQLKISAGVAEFKPEMANYQQWLKAVDSALYHAKNNGRDRIEL 370 Query: 370 A 370 A Sbjct: 371 A 371 >UniRef50_A8GB07 Diguanylate cyclase n=7 Tax=Enterobacteriaceae RepID=A8GB07_SERP5 Length = 353 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 163/342 (47%), Positives = 221/342 (64%) Query: 29 EHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIA 88 + +RSGL FARR LPR VGL F+ + S + W W +L+ F+WPHLA+Q A Sbjct: 8 DTRRSGLSFARRTYLPRVVGLGIGFICVFSVFYTQKTSYWVWGLLIFHGFIWPHLAYQWA 67 Query: 89 SRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLV 148 R+ P EI NL D+ G+WV +M N LPS +L +M +N M + G LF GL Sbjct: 68 RRSAMPFKAEIRNLLIDSFFGGLWVAMMAFNALPSVVILSMMGMNNMASAGKSLFFKGLA 127 Query: 149 LMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQV 208 + V+S L L G S PL+ +L LP+I YP+L G V+Y+TA +LAE K+ L Sbjct: 128 VQVLSALAISALLGFPFQPQSTPLQIYLCLPMIYFYPILLGLVTYRTAKRLAEKKQELLR 187 Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 +S RDG+TG+YNRRHWE +L ++FD+CRR+ ATL+++DIDHFK+INDT+GH +GDEA+ Sbjct: 188 ISMRDGLTGLYNRRHWEHLLHHQFDSCRRYQHSATLILMDIDHFKTINDTFGHALGDEAL 247 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT 328 L +L I LR D++GR+GGDEF ++ T AE A A+LR+ E LN + PQ+ Sbjct: 248 AVLAEELLIGLRAVDIVGRYGGDEFGAVLPNTSAEQASIALLRIQERLNEIVFREAPQLR 307 Query: 329 LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L IS G+A + MS Y +WLK+AD ALY+AK GRNR E+A Sbjct: 308 LNISAGIADYHGDMSGYLDWLKAADNALYRAKNNGRNRLELA 349 >UniRef50_C1M7K1 Diguanylate cyclase AdrA n=9 Tax=Gammaproteobacteria RepID=C1M7K1_9ENTR Length = 366 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 280/366 (76%), Positives = 312/366 (85%) Query: 6 MNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPP 65 MNDENF++K E L QN+HQRSGLRFARR+RLPRAVGL GMF PIAS LVS P Sbjct: 1 MNDENFYQKKVVPNEAFILLHQNDHQRSGLRFARRIRLPRAVGLGGMFFPIASVLVSQPI 60 Query: 66 PGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTA 125 G WWL+LVGWAFVWPHLAWQ+AS+A+DPL E NLK DA+LAG+W+G+MG+N+LPSTA Sbjct: 61 TGGWWLLLVGWAFVWPHLAWQLASKAIDPLHSEYTNLKADAILAGIWMGIMGINLLPSTA 120 Query: 126 MLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYP 185 +LMI+C+NLMGAGG R+F+AG VLMVVSCLVTL+LT I V+F+S L LSLP++V+YP Sbjct: 121 LLMIICINLMGAGGMRVFIAGAVLMVVSCLVTLQLTDIPVAFSSTQLSVLLSLPVLVVYP 180 Query: 186 LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 LLF WVSYQT +LAEHKRRLQVMSTRDGMTGVYNRRHWE +LRNEFDNCRRH RDATLL Sbjct: 181 LLFAWVSYQTLIRLAEHKRRLQVMSTRDGMTGVYNRRHWELLLRNEFDNCRRHQRDATLL 240 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA 305 IIDIDHFKSINDTWGHDVGD+AIVALTRQLQ+TLRGSDVIGRFGGDEFAVIM GT A SA Sbjct: 241 IIDIDHFKSINDTWGHDVGDQAIVALTRQLQMTLRGSDVIGRFGGDEFAVIMCGTSASSA 300 Query: 306 ITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 I AM RVHE L LRL PQV LRISVGVAPL + HYREWLKSAD+ALYKAK +GRN Sbjct: 301 IAAMSRVHERLTQLRLSCAPQVDLRISVGVAPLTSETEHYREWLKSADMALYKAKNSGRN 360 Query: 366 RTEVAA 371 RTE AA Sbjct: 361 RTEAAA 366 >UniRef50_C6CCW8 Diguanylate cyclase n=3 Tax=Enterobacteriaceae RepID=C6CCW8_DICDC Length = 371 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 157/351 (44%), Positives = 233/351 (66%), Gaps = 1/351 (0%) Query: 20 EEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFV 79 ++E +R+GL FARRV +PRA+GL F +A+ L P W W +LV F+ Sbjct: 4 SSSITYAESERRRTGLAFARRVYMPRAIGLGLGFFYVAAALYGRQLPVWAWGLLVAHGFL 63 Query: 80 WPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGG 139 WPH+A+ ++SRA DP+ RE NL DA G+W+GVMG+N LPS ++ +M +N + AGG Sbjct: 64 WPHIAYLVSSRARDPMRREYGNLLIDAAFGGIWIGVMGLNGLPSVLIMSMMGMNNIAAGG 123 Query: 140 PRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKL 199 +LF+ GL + V+ V L L ++ + ++ + LP++ IYP+ G V+Y+TA KL Sbjct: 124 LKLFLQGLGVQVLCVAVFLLLIQSPINTATTTIQLYFCLPMLFIYPISVGLVTYRTAMKL 183 Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 AEHKRRL+ MS DGMT +YNR+HWE +L+NEFD C R+ R ATL ++D+DHFK+IND + Sbjct: 184 AEHKRRLKEMSIHDGMTRLYNRQHWEQLLQNEFDICARYQRVATLALLDVDHFKTINDNF 243 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH VGD+A++ L+ L+ TLR +D+IGRFGGDEF ++ T + A + R+ E L ++ Sbjct: 244 GHHVGDDALLLLSNGLKSTLRQADIIGRFGGDEFGIVFPETRVDEARLVVERLREYLESV 303 Query: 320 RLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR-TEV 369 +L +TP + + IS G+ + +MS +R W+++AD+ALY+AK GR V Sbjct: 304 QLHHTPLLRIGISAGLVQFSSEMSDHRAWMRAADMALYQAKNRGRGCSVCV 354 >UniRef50_C6DCM6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae RepID=C6DCM6_PECCP Length = 353 Score = 362 bits (931), Expect = 8e-99, Method: Composition-based stats. Identities = 169/352 (48%), Positives = 240/352 (68%) Query: 19 GEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAF 78 PP + +RSGLRF++RV +PR VG L IAS L++ P P W +L+ AF Sbjct: 2 SASPPTFLTVDVRRSGLRFSQRVYIPRIVGTILCSLFIASVLITKPIPLLLWGLLLLNAF 61 Query: 79 VWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAG 138 WPH+A+ ++ R+ DP+ E NL D V G+W+G MGVN+LPS + ++ +N G Sbjct: 62 AWPHIAYLLSLRSRDPMRCEKRNLLFDVVFGGIWIGFMGVNLLPSAVIAAMVGMNGTAGG 121 Query: 139 GPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATK 198 G +LFV G++L V+C+ L L + VS ++ P++ + +P+++IYP+ G+V+Y TA K Sbjct: 122 GIKLFVQGILLQCVACVSVLVLFAVPVSLDTTPIQIYACVPMLLIYPIFLGYVTYNTALK 181 Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 LAEHKR L +S DGMT +YNR HWE +L++EFD C+R+ R ATL++ DIDHFK+ ND Sbjct: 182 LAEHKRMLMEVSIHDGMTNLYNRHHWERLLKHEFDLCQRYKRTATLVLFDIDHFKAFNDN 241 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 +GH+VGD+AI+ L R+L R +DVIGRFGGDEFAVI+ T A A+ A+ R+ E L+ Sbjct: 242 FGHNVGDQAILLLARELTSGFRETDVIGRFGGDEFAVILPQTSAGEALDAVSRIRESLSL 301 Query: 319 LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L TPQ+ + +SVG+A ++P+M Y +WLKSAD+ALY+AK GR RTEVA Sbjct: 302 KFLNQTPQLAVFVSVGIAEISPEMGQYMDWLKSADMALYRAKNKGRRRTEVA 353 >UniRef50_B1J1G5 Diguanylate cyclase n=17 Tax=Pseudomonas RepID=B1J1G5_PSEPW Length = 361 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 131/340 (38%), Positives = 196/340 (57%) Query: 28 NEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQI 87 + GL F RR+ LPR +GL +A+ + PP W WL+L+ +WPHLA+Q Sbjct: 2 DNRSGKGLSFVRRIYLPRVIGLGIGLFSVAAAVAPLSPPTWAWLLLLFNGLLWPHLAYQW 61 Query: 88 ASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGL 147 A R++ P E NL D+++ G W M N LP +L +M +N + AGG RL + GL Sbjct: 62 ARRSIAPYQAEQRNLLLDSLMGGFWTAAMHFNPLPCVTVLSMMTMNNVAAGGKRLVLRGL 121 Query: 148 VLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQ 207 + +V L+ L G + ++ PL+ + LP++ +YPL GWV Y+ A KLAEHKRRL+ Sbjct: 122 MAQLVGVLLASALLGTGLQLDATPLQIYACLPMLTLYPLALGWVCYRLAIKLAEHKRRLR 181 Query: 208 VMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEA 267 +S D +TG+ N W+ +L F C+ + + +IDIDHFK+INDT+GH VGD Sbjct: 182 DLSLTDSLTGLLNHGAWKDLLLLRFQACQNLQMPSVIALIDIDHFKTINDTFGHVVGDCV 241 Query: 268 IVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV 327 + ++ +L+ LR D+ GR+GGDEF VI+ T A AM R+ E + R P P + Sbjct: 242 LRKMSDELRRNLRAGDLAGRYGGDEFCVILPDTSESEARQAMERLRERIVCYRDPQLPHL 301 Query: 328 TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + +S+G++ + WL+ AD ALY AK+ GR++ Sbjct: 302 KISLSIGMSSFRADLQSPEHWLEKADKALYCAKRRGRDQV 341 >UniRef50_B2JNN3 Diguanylate cyclase n=1 Tax=Burkholderia phymatum STM815 RepID=B2JNN3_BURP8 Length = 359 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 129/337 (38%), Positives = 180/337 (53%) Query: 33 SGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAV 92 G F RV R GL F +AS LV W +LV FVWPH+A + A Sbjct: 11 QGKSFVERVYRLRIAGLGLGFFCVASVLVLQHRGAVLWSLLVFHGFVWPHVARRAALACE 70 Query: 93 DPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVV 152 P E NL DA+ G WV M NVLP+ +L ++ +N +GAGG LF G++ V+ Sbjct: 71 VPFRGEHLNLMIDAMFGGFWVVAMRFNVLPAALILAMVSMNNIGAGGLPLFARGVIAHVL 130 Query: 153 SCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTR 212 LV L G S S LP ++IYPL G+ SY+ + KLA+ R L+ +S Sbjct: 131 GVLVGLVTVGFMFSPMSQMPTILACLPFLLIYPLALGFTSYRLSLKLAQRTRELEHLSRT 190 Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 DG+T ++NRRHWE +L +EF+ CR + + L++ID+DHFK INDT GH GD + + Sbjct: 191 DGLTRLWNRRHWEGLLADEFERCRANRYASCLMLIDLDHFKRINDTMGHPAGDAVLQSFA 250 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRIS 332 L+ RG D IGR+GG+EF V++ G A T + + + + + IS Sbjct: 251 DLLRSHFRGGDSIGRYGGEEFGVVLPGATLREAHTIAKVLVQRVREKTKEASKECPCTIS 310 Query: 333 VGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 VG+A L + Y WL+ D +LY+AK GR+R V Sbjct: 311 VGIAQLTDDLPDYHTWLQEVDRSLYQAKATGRDRIVV 347 >UniRef50_B3PC25 YaiC/YhcK/ArdA family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC25_CELJU Length = 330 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 114/325 (35%), Positives = 190/325 (58%), Gaps = 10/325 (3%) Query: 55 PIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVG 114 + +TL P W W +L FVWPH+A+ +A R+ P RE +L+ DA G WV Sbjct: 1 MVGATLYPLKQPAWIWALLFLNGFVWPHIAYWLAKRSQSPFLREHLHLQLDAASGGFWVA 60 Query: 115 VMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAG----LVLMVVSCLVTLELTGITVSFNSA 170 +MG N L S +LM++ +N + AGG RLF+ G L +++ LV + +S Sbjct: 61 LMGFNPLGSCLILMMLWMNNIAAGGFRLFLRGVVTSLAGLLMGLLVVRSFLHWEFNLSSD 120 Query: 171 PLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRN 230 P+ + +LP++VIYPL G ++Y+ A +L K L+ +S DG+TG++NR +WE + Sbjct: 121 PVMIYAALPMLVIYPLAIGSITYRFAMQLHSQKELLKHLSRTDGLTGLFNRSYWEERVLA 180 Query: 231 EFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGG 290 + +R + L+++D+DHFK INDT+GH GD+ + + + LQ+ LR +++GR+GG Sbjct: 181 LINQTQRSGQPLCLVLLDVDHFKMINDTYGHGRGDQILQQIAQCLQVNLREHELLGRYGG 240 Query: 291 DEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP-----QVTLRISVGVAPLNPQMSHY 345 +EFA+ ++ T +A+ R+ + + T+ + + IS+G+AP P + + Sbjct: 241 EEFALALANTSLPAALATAERLRQAVATMNFADEHEPRLAPLCCSISLGLAPWQPGI-SF 299 Query: 346 REWLKSADLALYKAKKAGRNRTEVA 370 EW ++AD ALY+AK+ GRNR+ + Sbjct: 300 LEWQRAADQALYQAKREGRNRSCIY 324 >UniRef50_C7HYH7 Diguanylate cyclase n=1 Tax=Thiomonas intermedia K12 RepID=C7HYH7_THIIN Length = 368 Score = 346 bits (888), Expect = 8e-94, Method: Composition-based stats. Identities = 109/329 (33%), Positives = 174/329 (52%) Query: 39 RRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSRE 98 RR+ R VG+ L IA L+ W W +++ +WP +A A + D E Sbjct: 24 RRIYPLRVVGMGLGGLAIAGVLIEQHAHPWRWALMIVSCLLWPQIALLRARLSADSYRAE 83 Query: 99 IYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTL 158 +NL D+ +AGMWV +M N+LPS ++ + + + +G RL++ L + + ++T Sbjct: 84 KHNLLIDSAIAGMWVALMHFNLLPSVVLVTVTTFDKLSSGMRRLWLISLPGLFGAAVLTA 143 Query: 159 ELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV 218 + V S+ L +LP++V++ L SY+ ++ L+ + D TG+ Sbjct: 144 LILRPPVQLESSLLIVACTLPLLVVHTLSSSIGSYRLIRTVSRQNTLLEQLRRTDAQTGL 203 Query: 219 YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQIT 278 + R HW+ + + A LL+ID+DHFK +NDT+GH GD+AI A+ + ++ Sbjct: 204 FARDHWQQQADAALQLFQAVGQPACLLMIDVDHFKQVNDTYGHTAGDDAIRAVGQLIRDC 263 Query: 279 LRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPL 338 +R D GR+G DEFAV+ T A+ R+ L TLRLP+ P V L S+GVA Sbjct: 264 IREEDCAGRYGDDEFAVLCQNTGQPDALGIAERIRTELLTLRLPHHPNVRLSSSIGVAAA 323 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNRT 367 P S+ + W+++AD ALY AK GRN+ Sbjct: 324 APAFSNLQAWMQAADAALYSAKHQGRNQV 352 >UniRef50_A4WAF6 Diguanylate cyclase n=4 Tax=Enterobacteriaceae RepID=A4WAF6_ENT38 Length = 351 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 113/342 (33%), Positives = 179/342 (52%) Query: 26 PQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAW 85 +H+ G RF +R+ L R +G F+PI + L+ H W L+L AFVWP +AW Sbjct: 7 LSKQHRLPGNRFVKRMFLMRILGTFLCFIPILTVLIQHQRSEWLMLLLAFNAFVWPTVAW 66 Query: 86 QIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVA 145 + A R+V PL+ E NL DA G W+ +M VN LPS + I+ + + AGG L Sbjct: 67 RRARRSVTPLATEHQNLVVDAGAGGFWIAMMAVNPLPSVVIATILLADRLSAGGFVLMRK 126 Query: 146 GLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRR 205 V M+V L + G+ V + + +LP+I IY + ++ A +L R Sbjct: 127 AAVAMLVVFLAAWLMQGMAVVMTVSQQTMFATLPLIAIYIIALSVMTDSIAIRLRVKSRE 186 Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ ++ D + + NRR E + E ++ +R++ L+ IDID+FK +ND +GH VGD Sbjct: 187 LERIAMMDPLLDIANRRLLEKRIEKELKTLQQASRESALMFIDIDNFKEVNDRFGHKVGD 246 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP 325 + ++ L + R +D R GGDEF +++ T E A R+ E + Sbjct: 247 TLLATVSEILHLATRQTDTPARLGGDEFVILLPNTSIEEAHVVASRIMEAAAVMDDVAEE 306 Query: 326 QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 V +S+G+A +M + +WL++AD ALY+AK+ G+NR Sbjct: 307 AVNCTLSIGIAGATREMENVTDWLQAADTALYQAKRGGKNRI 348 >UniRef50_C6CCY7 Diguanylate cyclase n=2 Tax=Enterobacteriaceae RepID=C6CCY7_DICDC Length = 359 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 123/348 (35%), Positives = 180/348 (51%), Gaps = 2/348 (0%) Query: 20 EEPPLTPQNEH-QRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAF 78 P +P +H + RF RR+ L R +G F PIAS L +L+LV AF Sbjct: 3 TLPYYSPDTDHLKLRAFRFIRRMFLMRQLGTFLCFFPIASVLYELSRSWPLFLLLVLNAF 62 Query: 79 VWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAG 138 VWPH+A+ ++S A DP+ E N+ D G WV +MGV LPS ++ I+ + AG Sbjct: 63 VWPHIAYAVSSHARDPVKAEFINMTLDTAFGGAWVALMGVCPLPSAIIISILIADRYAAG 122 Query: 139 GPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATK 198 G +L V VS ++ L + WL+LP+ IY + VSYQ A + Sbjct: 123 GWKLLRMSTVASFVSFILVWTLLRFEHYTVLSERTLWLTLPLSTIYMITLSVVSYQLAAR 182 Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L E R L+ ++ D + NRR +E L EF +R A L++ID+DHFK +ND+ Sbjct: 183 LREKSRELERITLMDPYLSIPNRRLFEQRLDKEFLRTQRGESHAYLMLIDVDHFKYVNDS 242 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 +GH+ GD + ++ L+ DV RFGGDE +I+ + + ++H + T Sbjct: 243 YGHEAGDYLLTEISVVLRNIAGKYDVPARFGGDELGIIIQNSTDKIVTMTAHQLHAKVAT 302 Query: 319 LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 +RLP P IS+G+A + + WL SAD ALY AKK+G+NR Sbjct: 303 IRLPADPTFCCTISIGIARA-EHAATPQSWLNSADQALYAAKKSGKNR 349 >UniRef50_C5T000 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T000_ACIDE Length = 350 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 103/335 (30%), Positives = 170/335 (50%) Query: 33 SGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAV 92 + +RRV R +G+ L + + L W + +F+WPH+A+Q + + Sbjct: 4 PRRQLSRRVYPLRVLGMGLGGLVVGTVLWEQRAGWGPWAWMALVSFIWPHVAYQFSRLSG 63 Query: 93 DPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVV 152 +P EI NL D+ L V +M N+LPS ++ + ++ + G L++ L M V Sbjct: 64 EPYRAEIRNLLLDSALVTALVPLMHFNLLPSVLLITLTVVDKITTGIRGLWLRSLPGMAV 123 Query: 153 SCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTR 212 L LTG + ++ LP++ ++ + SY+ +++ + L + Sbjct: 124 GMLAGGALTGFEWAPTTSMPVIIACLPVMALHTVSVSVASYRLIRQVSRQNQLLDELRRI 183 Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 D +TG+Y R HW+ A L+++DIDHFK IND GH VGDEAI AL Sbjct: 184 DALTGLYGRGHWQEQAEAALRLHHATGEPACLVMLDIDHFKQINDLHGHTVGDEAIRALA 243 Query: 273 RQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRIS 332 ++ +R +D GR+GGDEFA+++ G + A+ R+ E + +RL + P++ S Sbjct: 244 HIVRSNVRTTDCAGRYGGDEFAIVLRGMHMDKALAVAQRICEQVQAMRLHDMPELQFTSS 303 Query: 333 VGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 +GVA + + S R W +AD LY+AK +GRNR Sbjct: 304 LGVAAADHRHSSLRAWTDAADAELYQAKASGRNRV 338 >UniRef50_Q6FA46 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FA46_ACIAD Length = 352 Score = 319 bits (819), Expect = 8e-86, Method: Composition-based stats. Identities = 101/334 (30%), Positives = 165/334 (49%), Gaps = 1/334 (0%) Query: 32 RSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRA 91 R+ R+ + R +G F I S L +++L AFVWP A+ A Sbjct: 15 TRSKRYVFRIFVMRQIGTILCFFSIFSVLYYLNYHEIIYVLLALNAFVWPIAAYLYAKNK 74 Query: 92 VDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMV 151 D + +L DA L GMWV +M ++ LPS M+ I+ + AGG ++ L+ M+ Sbjct: 75 KDGVRTTNISLIVDAALGGMWVAIMKISPLPSLIMVAILVSDRFAAGGWQILRPSLIAML 134 Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMST 211 L+ TG V+ + + W SLP+ IY + ++ + A +L + R + ++ Sbjct: 135 GIFLIFWSFTGFQVNLSFNEMMVWSSLPLATIYLISLSILTRKLAVQLIQKNREFERIAL 194 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 D + NRR +E L + F +R+ A L+++D+DHFK INDT+GH+ GD + + Sbjct: 195 MDPRLHIPNRRLFEQRLSSIFMQTQRNASSAHLILLDVDHFKKINDTYGHEAGDYFLAEM 254 Query: 272 TRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRI 331 + L+ + D RFGGDE A+I+ E I R+ + +RL + P+ + + Sbjct: 255 SSILRELIGPKDTPARFGGDELAIIVVDQSNEEIILLARRIKNSIQQIRLQSDPEFSTTV 314 Query: 332 SVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 S+G+A + W AD ALY+ K+ GRN Sbjct: 315 SIGIASA-ETVDTVSAWFALADKALYQVKRNGRN 347 >UniRef50_A9C166 Diguanylate cyclase n=3 Tax=Comamonadaceae RepID=A9C166_DELAS Length = 386 Score = 316 bits (811), Expect = 6e-85, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 172/338 (50%) Query: 34 GLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVD 93 R RR R +A L + + + W ++ A VWPH+A+ A + D Sbjct: 4 RQRIHRRTYPLRVSSMALGGLVVGTAMTEMGASPAVWGFVLVSALVWPHIAFLHARHSRD 63 Query: 94 PLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVS 153 E NL+ DA++ G W+ VM LPS A+L I + ++ LV +++ Sbjct: 64 SHRAEHANLQIDALIIGSWIPVMHFCALPSIALLAISIADRNHTATRDGWLQSLVATLLA 123 Query: 154 CLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRD 213 + L + ++ LP+++++ + W + Q KLA +LQV+S D Sbjct: 124 AALVALLLRPVPDWEASLAVQLSMLPLLLLHSVFSSWSTRQLVRKLARQNVKLQVLSRID 183 Query: 214 GMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTR 273 +T +Y+R +W R + R+ A LLI+DIDHFK IND++GH VGDE + A+ Sbjct: 184 PLTTLYSRDYWWQKARAALRDYRQTQASACLLIVDIDHFKRINDSFGHTVGDEVLQAIGL 243 Query: 274 QLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISV 333 ++ LR D GR+GGDEFAV+ T + A LR+ L+ LR+ PQ+ + S+ Sbjct: 244 TIRHCLRSHDAAGRYGGDEFAVLCMHTQLDDAYAVALRIRNQLSQLRVREHPQLRVSASI 303 Query: 334 GVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 GVA +P ++W+ +AD ALY AK AGR++ AA Sbjct: 304 GVAAADPSFLSVKDWINAADSALYSAKDAGRDQVIPAA 341 >UniRef50_B5RJW5 MASE2 domain/diguanylate cyclase n=2 Tax=Klebsiella pneumoniae 342 RepID=B5RJW5_KLEP3 Length = 352 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 98/331 (29%), Positives = 166/331 (50%), Gaps = 3/331 (0%) Query: 36 RFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPL 95 F +RV R +G+ FLPI S L +L+ A WP +A+ + + D L Sbjct: 17 SFIKRVYFLRQIGVVLCFLPIYSVLQEQSHQKITIALLILNALTWPSVAYLASMMSKDML 76 Query: 96 SREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCL 155 S E N+ D+ AG+W+ VM V+ +PS ++ + + AGG ++ L+ M++ L Sbjct: 77 STEKKNMILDSFWAGIWIAVMQVSPIPSLFIISVQIADRYAAGGWKILKPALMWMMIGFL 136 Query: 156 VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGM 215 + + LSLP+ YP++ VS + KL + + L+ + D Sbjct: 137 TVWLANDFKYTIEFSTRTVLLSLPLATCYPIVLSIVSRHLSIKLRKRRELLEKQALMDPG 196 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNR-DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQ 274 + NRR +E + + F R R + L++ID+D+FK INDT+GH+VGD + ++ Sbjct: 197 LDLPNRRFFEQKMESAF-RATRKKRIHSYLMLIDVDNFKKINDTYGHEVGDAVLSRISTI 255 Query: 275 LQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVG 334 L+ DV RFGGDE A+I++ + ++ I + + E + L LP+ + +S+G Sbjct: 256 LRECAGEKDVPARFGGDELAIIVNNSNSKLVIAMVHIIQEKIKDLSLPSHNDIYCTVSIG 315 Query: 335 VAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 ++ EW+K AD LY+ K+ G+N Sbjct: 316 ISCA-ENKESIIEWIKEADEMLYEVKRNGKN 345 >UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TWE2_ACIAC Length = 377 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 101/355 (28%), Positives = 158/355 (44%), Gaps = 16/355 (4%) Query: 31 QRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASR 90 +R+ R R A +FL + + W+VLV V+P LA+ A Sbjct: 18 ERTDHWLVRMNHRNRTFFYALLFLALGAHFRHTGAGPAVWVVLVVQFLVYPQLAYWTARS 77 Query: 91 AVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLM 150 A E+ N+ D + G+W G++G+ V + + + C+N++ G + + M Sbjct: 78 APRQAKAELRNMVVDNLFGGLWAGLLGMPVWITFTLFIGNCINVVAFHGYPGLLRLVAAM 137 Query: 151 VVSCLVTLELT-GITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVM 209 L L L + + L + + ++ +F SY+ A + + RL+ Sbjct: 138 GCGLLGGLVLYGDRPLHPDIDTATSLLCILALTLFLTVFAHTSYRRAMEQQKSNDRLREQ 197 Query: 210 --------------STRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 + RD +TG+YNRRH + L +E C +L++IDIDHFK I Sbjct: 198 FEEIRALQDQLQEQAVRDPLTGLYNRRHLDATLASEIARCGAQGLPLSLMMIDIDHFKRI 257 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT GH GD + AL + LQ +R D+ R GG+EF +++ TP A + E Sbjct: 258 NDTHGHAAGDAMLQALAQLLQRHVRVRDLACRLGGEEFVLLLPETPLAVARERAEALREA 317 Query: 316 LNTLRLPNTPQV-TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 L++ + P+V + +S GVA SAD ALY AK GRNR V Sbjct: 318 FEALQVRHDPEVLSATLSCGVAAFPQHARQPLALTASADEALYAAKMQGRNRVVV 372 >UniRef50_B4SNB1 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SNB1_STRM5 Length = 350 Score = 306 bits (785), Expect = 8e-82, Method: Composition-based stats. Identities = 99/345 (28%), Positives = 160/345 (46%), Gaps = 1/345 (0%) Query: 21 EPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVW 80 P L E G+ ARR+ R VG +PIAS ++ W W++L+ A W Sbjct: 1 MPFLIDATEVAVEGIGAARRIGWMRFVGNGLGAIPIASIILERQDGAWAWVLLLLNALAW 60 Query: 81 PHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGP 140 P LA + R+ P + + D+ G W+ M ++ +PS ++ + + AGG Sbjct: 61 PALALLLTHRSRQPAVVQFRCMVADSFFGGGWIAFMALSAVPSALFAALLVADKIAAGGV 120 Query: 141 RLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLA 200 RL + + +V+ L++ G S+ LS+P + +Y + +S+Q A ++ Sbjct: 121 RLAMRATLALVLGFLLSWWALGFPYQPISSQRTIVLSVPFLFVYGIGLSILSWQLARRVK 180 Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 R+LQ +S D + + NR + D + A LL++D+D FK IND+ G Sbjct: 181 SQNRQLQRLSRMDPLVELANRGFLILRAQQVLDKAQGQGGFACLLMLDVDDFKRINDSHG 240 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H GDE + + L+ R D+ R GGDEF V++ A+ R+ L Sbjct: 241 HRAGDEVLRQIAATLREFARPGDIPARLGGDEFVVLLRDCTTRDAMHVAERIRLHLLEAA 300 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 P V +S+G+A P +WL +AD ALY AK+ G+N Sbjct: 301 RQVAPGVEFSVSIGIAA-TPGQGTVEDWLATADKALYHAKRQGKN 344 >UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R75_RHOFD Length = 498 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 86/323 (26%), Positives = 155/323 (47%), Gaps = 32/323 (9%) Query: 80 WPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGG 139 +PH+ + A+RA D + E+ NL D+ L G+++ + + S A +M N G Sbjct: 29 YPHVQYWRAARAADSVKTELDNLLIDSFLLGLFMAALEFPLWLSFAAIMATLTNNAANKG 88 Query: 140 PRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKL 199 ++ M+ L+ + + G S ++ + I Y L+ G V +Q +L Sbjct: 89 WPSVPKNVLAMLAGALIWVTVRGFKFSPDTGWPLTIFCMVGICGYVLVIGNVGFQRNLQL 148 Query: 200 AE----------------------------HKRRLQVMSTRDGMTGVYNRRHWETMLRNE 231 +++L+ ++RD +T +YNRR+ +T L E Sbjct: 149 RRVREELRTREQELLKANQSLVVNLQEIEALQQQLREQASRDSLTALYNRRYLDTTLDRE 208 Query: 232 FDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGG 290 +C+R + +L++ID+D FK ND GH GD+ ++A+ + LQ + R SD+ R+GG Sbjct: 209 LASCKREGKPLSLIMIDVDDFKKYNDLHGHQAGDQCLIAVAKTLQASAKRASDLAARYGG 268 Query: 291 DEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ--VTLRISVGVAPL-NPQMSHYRE 347 +EF +++ G A +A + + L++P+ ++ IS+G+A + N Sbjct: 269 EEFLLVLPGMDATAAQGLAEELRRSVEALKIPHEQSRGGSVTISIGLAVMTNDSHKDVAG 328 Query: 348 WLKSADLALYKAKKAGRNRTEVA 370 L++AD ALY AK GRN+ +A Sbjct: 329 LLRAADEALYHAKHGGRNQVRLA 351 >UniRef50_A1WD95 Diguanylate cyclase n=2 Tax=Comamonadaceae RepID=A1WD95_ACISJ Length = 382 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 96/383 (25%), Positives = 166/383 (43%), Gaps = 20/383 (5%) Query: 6 MNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPP 65 MN E ++ A L + HQR L A V +G G +A+ +++P Sbjct: 1 MNQEATGRRGLAQRTLDALITTDPHQRIRLAMAG-VSALLMLGCIGAMHLVAAAGLTYPV 59 Query: 66 PGWWWLVLVGWAF--VWPHLAWQIASRAVDP---LSREIYNLKTDAVLAGMWVGVMGVNV 120 P +WW + G V+ + + R DP L + +Y + +A + G+ Sbjct: 60 PVYWWTLACGAGITTVFVLIRSGASRRFADPSLTLFQIVYAIACNAAAYVIAGPARGIAP 119 Query: 121 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLM-VVSCLVTLELTGITVSFNSAPLEWWLSLP 179 ++M L + + GLV +V + P L Sbjct: 120 PILAVIMMFGVFGLTPRQMVGVALYGLVAFGAAGAVVQWWHPAWLSPDSQPPALSAAYLV 179 Query: 180 IIVIYPLLFGWVSYQT----------ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLR 229 +I + +++ + +LA +++ ++ RD +TG+ NRR+ M+R Sbjct: 180 MIAVVLASSTFLTTRVHSARARLRSQQRELAAAVEQIRELAVRDELTGLPNRRYMLEMMR 239 Query: 230 NEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFG 289 E +R + L +D+DHFK++NDT GH GD A+ + + + +R SD++ R+G Sbjct: 240 LEHARAQRSRQPLLLAQLDLDHFKAVNDTHGHAAGDVALQSFAQTVHGCVRASDLLARWG 299 Query: 290 GDEFAVIMSGTPAESAITAMLRVHEGLNTLRL--PNTPQVTLRISVGVAPLNPQMSHYRE 347 G+EF ++M+ T + RV + + P Q++L +SVG+A L Sbjct: 300 GEEFLLLMANTHPADGTRLLERVRATVAATPVALPGGTQLSLTVSVGLAEL-AHGESTAA 358 Query: 348 WLKSADLALYKAKKAGRNRTEVA 370 L+ AD ALY AK+ GRNR +A Sbjct: 359 LLQRADAALYGAKRLGRNRVLLA 381 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 95/351 (27%), Positives = 149/351 (42%), Gaps = 24/351 (6%) Query: 24 LTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHL 83 + R G R + + +GL FL S+ W L AF P + Sbjct: 223 FLLVKSYSRWGYRILQALLAVNLLGLIYGFLG------SYQVGIIWISSL--AAFATP-V 273 Query: 84 AWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLF 143 AW I I + +L G +V +L + + + + L Sbjct: 274 AWLIG----------INVWRRGQILGGFYVLAWTPLLLGHLVLAVSKLGWIPRSPFTELA 323 Query: 144 VAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHK 203 V + V L I + +L I L + +L + Sbjct: 324 PQAGVAVEVILLSFALAYRINMERRRRQQAQEHALDIQRQANLTLESRVRERTEELEQAN 383 Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 +L+ +S DG+T V NRR ++ L E++ RH + +L+++DIDHFK +ND +GH V Sbjct: 384 EQLRAISLTDGLTHVANRRRFDEKLETEWNRALRHEHELSLILLDIDHFKQVNDRFGHLV 443 Query: 264 GDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL- 321 GD+ +VAL L + R D++ R+GG+EFA+++ T A R+ + + Sbjct: 444 GDDCLVALASILSDEVQRSGDLVARYGGEEFAILLPTTDVAGAQQVAERMRLSVARTPVN 503 Query: 322 --PNTPQVTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTEV 369 + V+L IS+GVA L P S +E ++ AD ALY AK GRNR V Sbjct: 504 SGEHMSPVSLTISLGVATLTPNRQSDCQELIRRADEALYAAKSDGRNRVVV 554 >UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAX1_PSEFS Length = 388 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 83/391 (21%), Positives = 158/391 (40%), Gaps = 38/391 (9%) Query: 7 NDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVS---H 63 +++ F G++ + + + L R G L + H Sbjct: 8 SNQADFMNGLGRGQDQDCFIEEQVRTDRLHQLFRQSFAAIFGSYLAALMLCWLCWDRFDH 67 Query: 64 PPPGWWWLVLVGWAFVWPHLAWQIAS---RAVDPLSREIYNLKTDAVLAGMWVGVMGVNV 120 W L + + + + P E T + AG+W Sbjct: 68 QVILVWLGALAVSSLLRVKMFMEWFRCPNAERTPERWERRYWLTLMLSAGIWGAG----- 122 Query: 121 LPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSC--------LVTLELTGIT----VSFN 168 A+ ++ + + LF G+ + VSC L +L L + + F Sbjct: 123 ----ALAVMPTDDRLSQALVMLFTVGMSVSAVSCYSAYRYMTLASLALVLLPCTLWLLFQ 178 Query: 169 SAPLEWWLSLPIIVIYPLLFGWV---------SYQTATKLAEHKRRLQVMSTRDGMTGVY 219 + ++ +++ ++V + +++ ++ + D +TG+ Sbjct: 179 PSSMQVGVAIAVLVFSTFVVSATRKLSDALEKAFRLTRQMERAHTISTRAAQTDELTGLM 238 Query: 220 NRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL 279 NRR + + ++ CR + + L++D+DHFK INDT+GH GD+ + + + + Sbjct: 239 NRRAFFEHAQVLYEQCRHNRQPLCALMMDMDHFKQINDTYGHQAGDQVLRQIGGVISASF 298 Query: 280 RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLN 339 R +DV GR GG+EFAV++ T ++A T ++ + ++ L + P L S+GVA + Sbjct: 299 RQADVYGRLGGEEFAVLLPNTSLDTARTIAEQLVKAISGLA--SEPVHGLSASLGVASTH 356 Query: 340 PQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 Q + +AD ALY+AK GRN+ VA Sbjct: 357 TQDQDLHGLMNTADKALYRAKAQGRNQVAVA 387 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 70/230 (30%), Positives = 121/230 (52%), Gaps = 13/230 (5%) Query: 147 LVLMVVSCLVTLELTGITVSFNSAPL------EWWLSLPIIVIYPLLFGWVSYQTATKLA 200 L+ + + L G V ++ ++ ++ + + ++ G+ Y L Sbjct: 240 LITFIPVFNLNNHLMGYLVRYSKDNTYPIILKSFYTNITLSFLLAVILGFSVYIFLKDL- 298 Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + + +S D +TG+YN+ + +L+ E +R+ R +L+I DIDHFK INDT+G Sbjct: 299 ---EKFRYLSETDRLTGLYNKGKFNEVLQREIQRAKRYKRPLSLIIFDIDHFKKINDTYG 355 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H VGDE + AL + ++ +R +D R+GG+EF ++ T E A ++ + + T + Sbjct: 356 HKVGDEVLKALAKLIKKNIRKTDFAARWGGEEFVILAPETNVEGAKKLAEKLRQAVETYK 415 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 P + IS+GVA L P +++ AD+ALYKAK+ GRNR E+A Sbjct: 416 FPTVG--KVTISLGVAQLEPDEK-PEDFIVRADMALYKAKEGGRNRVEIA 462 >UniRef50_C5T8S9 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8S9_ACIDE Length = 386 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 87/341 (25%), Positives = 150/341 (43%), Gaps = 25/341 (7%) Query: 52 MFLPIASTLVSHPP---PGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVL 108 +A V W+ ++ V+PH+ + A RA DPL+ EI N+ D Sbjct: 24 WLFVVAVLGVHFRDIGLGTGAWVPMLAQFVVYPHVVYLRARRAKDPLAAEIQNMLLDNFC 83 Query: 109 AGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFN 168 G+W +G + +++ C+N+ + V L + +T+ +TG + + Sbjct: 84 FGLWAAALGFPLWIGYMLIICGCINVTAFRAGKGAVQALAAAALGAALTVAVTGWRFTPD 143 Query: 169 SAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQ--------------------- 207 ++ L LS+ + Y +LF ++ LA + +L+ Sbjct: 144 TSLLVSALSMGCLTTYLVLFARGAHTRTVVLANTRAQLRQSQAQLQSQLQAVQSLQAQLT 203 Query: 208 VMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEA 267 + RD +TG+YNRR+ T L E D +L++D+DHFK IND GH GD+ Sbjct: 204 EQANRDPLTGLYNRRYLNTALPRELDASAGAGLPLAVLLMDLDHFKLINDRLGHAAGDDV 263 Query: 268 IVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL-PNTPQ 326 + + L R +D+ R+GG+EF +++ G ++A+ + + + + Sbjct: 264 LCQVAALLLEGTRANDICCRYGGEEFLLVLPGMALDAALARAQAFRQKVADRQWCADGQP 323 Query: 327 VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 V + +SVGVA + AD ALY+AK GRNR Sbjct: 324 VAVTLSVGVACTLGAALSPAALIDRADRALYQAKAEGRNRV 364 >UniRef50_UPI0001C3940A response regulator receiver modulated diguanylate cyclase n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3940A Length = 392 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 5/223 (2%) Query: 153 SCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTR 212 + EL V L ++ + V ++ L + + LQ ++ Sbjct: 142 GTMFWNELFISPVRNEQGELTNFIGIQTDVTERKKSEEALERSRIALKKTNQELQRLALY 201 Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 D +T V NRR + L + C R L++ D+D+FK NDT+GH GD+ + + Sbjct: 202 DDLTQVANRRRFNEYLAYNWHRCSREQEPIALILCDVDYFKPYNDTFGHQAGDDCLHKIA 261 Query: 273 RQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT--- 328 R + + R D++ R+GG+EFA+I+ TP A+ R+ + + LR+P+ + Sbjct: 262 RAISGAIQRSVDLVARYGGEEFAIILPNTPINGAVKVAERIRKQVENLRVPHPGSQSSDY 321 Query: 329 LRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTEVA 370 + +S+GVA P + AD ALY+AK GRN T +A Sbjct: 322 VTVSLGVACKIPHSELSVDSLIAQADEALYQAKNQGRNCTVIA 364 >UniRef50_Q2SPL7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL7_HAHCH Length = 405 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 98/385 (25%), Positives = 166/385 (43%), Gaps = 23/385 (5%) Query: 6 MNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPP 65 M F + + + PP Q+ A R R A A+ + S P Sbjct: 1 MRGFAFHRNSPNKRDLPPALRDELEQQRKRDLANRQRPGILFYPATWVFISAAIMFSSPT 60 Query: 66 PGWWWLVLVGWAFVWPHLAW------QIASRAVDPLSREIYNLKTDAVL-AGMWVGVMGV 118 P + ++ ++ Q + L A A +W GV + Sbjct: 61 PEKSLWLAYAALLIFAVSSYRYYAMHQFMRKLESGREASYTPLLLGAGFSASLWGGVAAL 120 Query: 119 NVLP-----STAMLMIMCLNLMGAGGPRLFVAG-LVLMVVSCLVTLELTGITVSFNSAPL 172 +VLP + + L L G L + G +V + + CL+ + ++++ P Sbjct: 121 SVLPTPFAPHFPLFLTCTLGLCAGGAASLAILGRMVNLFIICLLAPMTLALFSAYSTQPG 180 Query: 173 EWWLSLPIIVIYPLLFGW-------VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWE 225 L + V+ + KL++ L ++ +DG+TGV NRR+++ Sbjct: 181 VIGFLLISFGLGMSWISTLPRHEYEVAVLSIIKLSQQANYLTELTIQDGLTGVKNRRYFD 240 Query: 226 TMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDV 284 +L + R N +LL+IDIDHFK +ND +GH +GDE +V + L L R SDV Sbjct: 241 QILSADLRRASRLNYPISLLLIDIDHFKRVNDRYGHLIGDECLVQTAQTLMRQLQRNSDV 300 Query: 285 IGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN-TPQVTLRISV-GVAPLNPQM 342 + R+GG+EF +I+ G AE A ++ + + N + V++ IS+ GV+ + + Sbjct: 301 LARYGGEEFGIILPGVDAEEAAALAEKLRSAVAACAVWNLSDPVSVTISIGGVSGVPKET 360 Query: 343 SHYREWLKSADLALYKAKKAGRNRT 367 ++ L+ AD ALY+AK GRN Sbjct: 361 MTPKQLLELADKALYQAKSYGRNCV 385 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 84/363 (23%), Positives = 143/363 (39%), Gaps = 19/363 (5%) Query: 26 PQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVS-------HPPPGWWWLVLVGWAF 78 + + ++ R+ R G + +A S + V + F Sbjct: 3 SSLDERIKSHQYIRKRRTLMTFGSYFLTFAVAMAGWSSGLLELRYAVHFLIMSVAINGGF 62 Query: 79 VWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWV--------GVMGVNVLPSTAMLMIM 130 L+ R L+ E + L M+ + V ++P ++ + Sbjct: 63 YLCFLSNWNLRRKDPNLTEEQMLISLFPPLYVMYFMDDNQARSALAMVAIIPLLYGILGI 122 Query: 131 CLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGW 190 F L L+ + L F + + + +I + Sbjct: 123 DTKRYIRVAAAYFGGYLGLLGLLLWQKPRLVTPNSEFVLLTALFMVMAQMALIGGFISKL 182 Query: 191 VSYQTAT--KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 + +L E ++ VM++ D +TG+ RR L NEF CRR + +L ++D Sbjct: 183 RASLRVKNHQLNEALEKISVMASTDELTGLCTRRELMKQLSNEFSRCRRSSGALSLCLLD 242 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 IDHFK IND++GH GD + + + +Q +R D +GR+GG+EF +I+ TP + A Sbjct: 243 IDHFKRINDSYGHQAGDAVLKKVAQTMQSLVRSIDCLGRYGGEEFLLILPQTPLDGAFIT 302 Query: 309 MLRVHEGLNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 R+ + + P P+ + IS+G A L + + D ALY AK AGRNR Sbjct: 303 AERLRRAVMDIPFPEVAPEFRVTISLGAAEL-EEGEAMETLISRVDKALYAAKGAGRNRV 361 Query: 368 EVA 370 A Sbjct: 362 VSA 364 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 8/227 (3%) Query: 150 MVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSY----QTATKLAEHKRR 205 +V+ + +L G+ ++ + WL I ++ + + +L Sbjct: 1068 LVLPVVAFDQLWGLLIAHDCHQPRKWLDHEITLLSQITITAAIAIHQGELHQQLQNANLE 1127 Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ +S DG+T V NR ++ L E+ R +L++ D+DHFK NDT+GH GD Sbjct: 1128 LKKLSAIDGLTQVANRHRFDVYLEQEWRRLMRSRHSLSLILSDVDHFKWYNDTYGHLAGD 1187 Query: 266 EAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 + + R ++ ++ R +D++ R+GG+EFA+++ T + A+ ++ + + L +P+T Sbjct: 1188 HCLQQIARVIKTSVGRPADLVARYGGEEFAIVLPETSLKGALFVAEQIRQKVKNLTIPHT 1247 Query: 325 PQV--TLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTE 368 + +S+GVA L P + + + +AD ALY+AK GR+R Sbjct: 1248 KSAYQCVTLSLGVASLIPSGALSPKALINAADEALYQAKANGRDRVV 1294 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 5/175 (2%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 + ++ D +T + N + L + + +LIID++ FK I Sbjct: 414 ILTQQRLTHLIHHQASYDPITQLPNWIIFNHRLALALVDATHGSNMLGVLIIDLNQFKRI 473 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSD----VIGRFGGDEFAVIMSG-TPAESAITAML 310 ND+ GH VGD + + +LQ L ++ R+ G F V++S + AI Sbjct: 474 NDSLGHGVGDYLLQKASDRLQNCLESYSFLEPLLARWHGAGFIVLLSQLAYVDEAINFSQ 533 Query: 311 RVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 ++ + + L +S+G+A LK+A+ A+Y+AK+ G+N Sbjct: 534 KLLNDFQEPFYVQSQAIYLGVSIGIALAPYDGDSSEVLLKNAESAMYQAKQQGKN 588 >UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Phytochrome (GAF) sensor n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YS99_9CYAN Length = 628 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 5/221 (2%) Query: 156 VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGM 215 + L ++ + +W + L + P+ + +L + L+ M+ DG+ Sbjct: 407 LWGMLIACQLTQSRRWEKWEVHLLEQLTTPIAVAIQQAELYEQLKIANQELEKMAMTDGL 466 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQL 275 T V NRR ++ +L E++ RR +L+I DID+FK NDT+GH GD + + + L Sbjct: 467 TLVANRRFFDKILSQEWNRLRREIGTLSLIICDIDYFKRYNDTYGHLAGDSCLKKVAQVL 526 Query: 276 QITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV---TLRI 331 Q + R D++ R+GG+EFA+++ T E AI + + L++ + + + I Sbjct: 527 QEEVKRSGDLVARYGGEEFAILLPKTDLEGAILVSEVICSKVRALQITHEKSLVAPYVTI 586 Query: 332 SVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTEVAA 371 SVGVA P+ + + AD ALY+AKK GRNR VAA Sbjct: 587 SVGVASTIPEPPLIPKTLILRADQALYEAKKNGRNRVFVAA 627 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 91/356 (25%), Positives = 142/356 (39%), Gaps = 34/356 (9%) Query: 45 RAVGLAGMFLPIASTLVSH-----PPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREI 99 R + F I S L + P + +W +AS P I Sbjct: 234 RILLQGIAFTIIFSLLFARDFLRIYPHTHPKSSRIVKIILWAASGLVVASLF-LPYFYVI 292 Query: 100 YNLKTDAVLA--------------GMWVGVMGVNVLPSTAMLMIMCL--------NLMGA 137 L +LA G V + + I+ + M Sbjct: 293 RVLIICTILACVMGLFAGFYRQVEGYGVARFYLYSWSLFMLGAILVALNKFDVLPSNMIT 352 Query: 138 GGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTAT 197 LF G+ +V+S + + L A E +L + L + + Sbjct: 353 EYSMLFGTGVGTVVLSAALAVRLNDEKNKRYHAQAE---ALRVQRESVELLEERVKERTS 409 Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 L E +L+ +S D +TG+ NRR + +L E R + +++DID FK+ ND Sbjct: 410 ALREANEKLEKLSNTDSLTGLNNRRSLDELLAMEVKRTCRTGAPLSAMMMDIDRFKAFND 469 Query: 258 TWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 T GH VGD + A+ + T R SDV+GR+GG+EF V++ TP + A R+ + Sbjct: 470 THGHQVGDACLKAVAGVIASTAQRPSDVVGRYGGEEFCVLLPDTPLDGAQIIAERIRAAV 529 Query: 317 NTLRLPNTPQ-VTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L + Q V + IS+GV+ L + +++AD ALY AK AGRN +A Sbjct: 530 ENLDFTVSGQRVPVTISIGVSELTYCASDSGKALVEAADEALYSAKSAGRNCVRLA 585 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 2/184 (1%) Query: 186 LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 + +++ Q T ++ +L M+ DG+TGV+NRR+ +T L+ E + RRH +++ Sbjct: 115 ISAIYITVQDVTDFVIYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIM 174 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA 305 ++DIDHFK INDT GH GD + ++ L +R SD++GR+GG+EF I+ T E A Sbjct: 175 MLDIDHFKEINDTHGHICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQA 234 Query: 306 ITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 + R + + Q + +S+GV L+ + +K AD ALY+AK+ GR Sbjct: 235 LVLAERCRTQVAASQFSCTDHQSRVTVSIGVTDLH-RDDTLDSIIKRADDALYQAKRTGR 293 Query: 365 NRTE 368 NR Sbjct: 294 NRVC 297 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 2/186 (1%) Query: 187 LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 L + T+ + + L+ + D +TGV NRR++ E R++ + + Sbjct: 404 LRMIGTSTDITERKQLEEELKRQARIDFLTGVSNRRYFMEQAEQEIQRTSRYDTPLSFFM 463 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAI 306 +DID FK +NDT+GH GD + + + TLR D+IGR GG+EFA+++ T A Sbjct: 464 LDIDLFKQVNDTYGHKSGDIVLKRMASVCRETLREIDIIGRVGGEEFAILLPETDKAQAA 523 Query: 307 TAMLRVHEGLNTLRLP--NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 R+ L ++P + +S+GVA + L AD ALY+AKK GR Sbjct: 524 EVAERLRSVLADEKVPTEAGAPIQFTVSIGVASRVSSQDNIDMLLNLADEALYQAKKYGR 583 Query: 365 NRTEVA 370 NR +A Sbjct: 584 NRVYIA 589 >UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Nostocaceae RepID=B2J0M5_NOSP7 Length = 888 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 119/229 (51%), Gaps = 9/229 (3%) Query: 148 VLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLL--FGWVSYQTA--TKLAEHK 203 MVV L L G+ ++ + +W + + ++ L +Q+ ++ Sbjct: 651 AAMVVPILNGEHLWGLLIAHQCSAPRYWQAFEVNLLQQLASQVAIAIHQSVLYQQVQAAN 710 Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 LQ ++T DG+T + NRR ++ L NE+ +R +L++ D+D FK NDT+GH Sbjct: 711 EELQRLATLDGLTQIANRRRFDQYLENEWHRLKREQMPLSLILFDVDFFKRYNDTYGHLA 770 Query: 264 GDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 GD+ + L L+ + R +D++ R+GG+EFAVI+ T E AI+ + + + L +P Sbjct: 771 GDDCLRQLGSALKSVIKRPADLVARYGGEEFAVILPNTEIEGAISVAQTIRQAVYDLIIP 830 Query: 323 NTPQV---TLRISVGVAPLNPQMSH-YREWLKSADLALYKAKKAGRNRT 367 + + +S+GVA + P ++ + +AD +LY AK+ GR+R Sbjct: 831 HAQSSVCDRVTVSLGVASIVPNCETSPQDLINAADKSLYIAKQQGRDRV 879 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 60/181 (33%), Positives = 108/181 (59%), Gaps = 1/181 (0%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 +++ T+ E + +L+ ++T D +TG+ NRR + + + RR+ RD +LL++DI Sbjct: 589 VGTFRDVTERKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDLSLLMMDI 648 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 D+FK++ND +GHD GD+ + L++ LR DV GR GG+EF++++ T + A Sbjct: 649 DYFKTVNDMYGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGLDGATLVA 708 Query: 310 LRVHEGLNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 R+ + T ++ + + + +S+GVA + + LK+AD+ LY AK+AGRN+ + Sbjct: 709 ERLRAEIETTKMNTRSGSLNITVSIGVATYSEHTKTLEQLLKAADIGLYAAKEAGRNQVK 768 Query: 369 V 369 V Sbjct: 769 V 769 >UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepID=A1WM32_VEREI Length = 612 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 75/352 (21%), Positives = 142/352 (40%), Gaps = 19/352 (5%) Query: 25 TPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWL----VLVGWAFVW 80 +++ + + + L VG + H P ++ +++ F+ Sbjct: 271 FLESKTRLPRMHRVLQAFLVVLVGSWIAVTVSGDIVAYHAVPIYFIFGCAPLILAAGFLA 330 Query: 81 PHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGP 140 ++ A + L A + G + + V+ L N + Sbjct: 331 LRPGYRAAR---------FFVLAFVASITGSFFTALTVSGLIPYTF-----ANFHASEFG 376 Query: 141 RLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLA 200 L L+ ++ V L + + + ++ + + ++LA Sbjct: 377 LLADMVLLSQALADRVKLLSEQRDAAELREIEQKIATTALLKQANEDLERMVLERTSELA 436 Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + + + D +TGV NRR++E + EF +R + ++++IDID FK +ND +G Sbjct: 437 RARDEAEHFARIDMLTGVANRRYFEEVATMEFARTQRGQQALSVILIDIDLFKQVNDRYG 496 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H GD I A+ R + ++R SD + R GG+EF+V++ G A R+ E + Sbjct: 497 HAAGDAVIRAVARLAKESVRESDFVARIGGEEFSVLLPGIGQAPAFATAERLRERIAACV 556 Query: 321 LPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + + S GV+ + L+ AD ALY AK+AGRN+ V A Sbjct: 557 VEHDGHSLGFTASFGVSEQVADDPGFSSLLRRADQALYAAKQAGRNQVVVQA 608 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 3/182 (1%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 ++ TK E L ST D +TG+YNRR+ E L +RH+R +L++ Sbjct: 593 VAVFTFVDITKEKELSDMLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMF 652 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DID FK IND++GHDVGD+ + A+ + + +R +D+ R+GG+EF +I T E A Sbjct: 653 DIDFFKHINDSFGHDVGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKI 712 Query: 308 AMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 ++ + L + + S GVA L LK AD ALY+AKK GRN+ Sbjct: 713 LAEKLRSLIRNLHFEEG--INVTCSFGVASLEKH-DTKETLLKRADEALYEAKKTGRNKV 769 Query: 368 EV 369 V Sbjct: 770 VV 771 >UniRef50_A3YBD7 Regulatory component of sensory transduction system n=1 Tax=Marinomonas sp. MED121 RepID=A3YBD7_9GAMM Length = 357 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 151/335 (45%), Gaps = 9/335 (2%) Query: 42 RLPRAVGLAGMFLPIASTLVS-HPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPL-SREI 99 R G + + + V +++ ++PH+A+ A ++P E Sbjct: 12 YPIRVAGCLLVMMNVYIARVPELDSTHLLIWIILLLFIIYPHIAF--AKFVLNPTEKTEA 69 Query: 100 YNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLE 159 +L D G+ ++ N + + + G L GL+ ++ L+++ Sbjct: 70 NSLLVDMFAIGLMANLVYFNPVIFLPYYIANSAAIYAMKGISLVFKGLLAAIIGALISIP 129 Query: 160 LTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVY 219 + G + S + + ++S+ L + K + +V + D +T + Sbjct: 130 IFGFEYRMDMNLYALIPSFLYLFLATHYVSYLSHLRGVILNKAKAKAEVQANSDSITKIA 189 Query: 220 NRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL 279 NRR+++ L ++ + + ++L IDID FK+ ND +GH +GD+ + + + + ++ Sbjct: 190 NRRYFDRKLEEQWWRSYQSQQALSMLAIDIDFFKNYNDFYGHPLGDDCLNLVAQTIAGSV 249 Query: 280 -RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP---QVTLRISVGV 335 R SD++ R GG+EF +I+ T + A +V + L++ + + +S+GV Sbjct: 250 TRSSDLVARTGGEEFNIILPNTNLDGAYMVAKKVLAAIEALQIEHRGSDVSNVVTVSIGV 309 Query: 336 APLNPQMS-HYREWLKSADLALYKAKKAGRNRTEV 369 + + P S R + +AD ALY+AK+ GRNR V Sbjct: 310 SSIIPVASFSSRGLMLAADQALYQAKREGRNRISV 344 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 3/210 (1%) Query: 159 ELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV 218 I + + L + + ++ T+ + + +L +S D +T Sbjct: 454 WAERILHRMDGSQLPVLKIVKRLRTKSGEKLIETFIDLTERKKLEEQLYRLSITDYLTQA 513 Query: 219 YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQIT 278 YNRR++ ML E + +R L+++DIDHFK++ND +GH GD + L ++ Sbjct: 514 YNRRYFTEMLEREIERAKRTKMPFALIMLDIDHFKNVNDRFGHAAGDLVLKTLANLIKNR 573 Query: 279 LRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPL 338 +R +D + R+GG+EF +++ TP E A + E L+ L +P + S GV Sbjct: 574 IRQTDCLARWGGEEFVILLPNTPVEKAAGLAEELREQLSMLEIPGVG--RVTASFGVTGY 631 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNRTE 368 P L AD LY AK +GRN Sbjct: 632 CP-GDTLDTLLMRADQMLYTAKASGRNCVR 660 >UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece RepID=B1WQB8_CYAA5 Length = 493 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 99/187 (52%), Gaps = 5/187 (2%) Query: 187 LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 Q +L + ++L+ + DG+T ++NRR+++ +L E+ RR +L++ Sbjct: 301 TLEKRVEQRTIELQQALKKLKALVNLDGLTQIFNRRYFDEVLYREWQRGRREKSVISLIL 360 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESA 305 D+D+FK N+T+GH GD + + + ++ + R SD++ R+GG+EF +++ T A Sbjct: 361 CDVDYFKIYNETYGHLGGDSCLQEVAQGIRRQVKRPSDLVARYGGEEFVILLPNTDLNGA 420 Query: 306 ITAMLRVHEGLNTLRLPNTPQV---TLRISVGVAP-LNPQMSHYREWLKSADLALYKAKK 361 + + + + +P+ + + IS+GV + + Y ++ AD ALY+AK+ Sbjct: 421 LALAEMIRNAIEAMNIPHENSLVSDHVTISMGVTSKIPQETDEYEHLIEEADDALYQAKE 480 Query: 362 AGRNRTE 368 GRN Sbjct: 481 NGRNCVC 487 >UniRef50_Q2BMK3 Serine/threonine kinase with two-component sensor domain n=3 Tax=Bacteria RepID=Q2BMK3_9GAMM Length = 1723 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 107/192 (55%), Gaps = 4/192 (2%) Query: 184 YPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDAT 243 Y + +L E L+ + DG+TG+ NRR ++T L + RR + Sbjct: 1526 YTHSLEEKVAERTAQLEELNEELKKLVDSDGLTGLANRRCFDTYLARTWLRLRREQNPLS 1585 Query: 244 LLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPA 302 +++ D+D+FK+ NDT+GH GD+ +V L + ++ + R +D++ R+GG+EF V++ T Sbjct: 1586 IVMFDVDYFKTFNDTYGHQSGDDCLVMLAKTVREQIQRPADLVARYGGEEFIVVLPDTDE 1645 Query: 303 ESAITAMLRVHEGLNTLRLPNTPQV---TLRISVGVAPLNPQMSHYREWLKSADLALYKA 359 E A+ ++ + +L++P+ V + ISVGVA P ++ AD ALY+A Sbjct: 1646 EGAMAVAGQICVAVASLKIPHCNSVVADHVTISVGVATTCPDTQGPDSLIELADQALYEA 1705 Query: 360 KKAGRNRTEVAA 371 KK GRN+ ++AA Sbjct: 1706 KKQGRNQVKLAA 1717 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 8/227 (3%) Query: 150 MVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSY----QTATKLAEHKRR 205 +V+ + +L G+ ++ + W I ++ + G + +L Sbjct: 1032 LVLPIVYQDKLWGLLIAHDCRKPRKWQDHEITLLSQIAIGAAIAIHQGELYQQLESANLE 1091 Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 L+ +S DG+T V NR ++ L E+ R + +L++ D+DHFK NDT+GH GD Sbjct: 1092 LKKLSCLDGLTQVANRHRFDMYLDQEWRRLMRSQQFLSLILCDVDHFKGYNDTYGHLAGD 1151 Query: 266 EAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 + + + + ++ + R +D++ R+GG+EFA+I+ TP A+ ++ + + L +P+ Sbjct: 1152 QCLQQVAQVIKNAVGRPADLVARYGGEEFAIILPDTPLRGALYVAEQIRQQVQYLTIPHP 1211 Query: 325 PQVT--LRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTE 368 + +S GVA P + + + +AD ALY+AK GRN+ Sbjct: 1212 QSTHQWVTLSSGVASFIPSAALSPKALINAADEALYQAKANGRNQVV 1258 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 17/192 (8%) Query: 182 VIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 V+ L+ V Q T+L ++ ++ D +T + N + L + Sbjct: 392 VLGLHLYMIVIQQRLTRL------IRHQASYDVITQLPNGIIFNHRLSLALVDAVNQGNM 445 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSD-------VIGRFGGDEFA 294 ++I+D++ FK IND+ GH VGD + + +LQ L D ++ R+ G F Sbjct: 446 LGVVILDLNQFKRINDSLGHGVGDFLLTKVRDRLQNAL---DTYSIFNPLLARWHGARFI 502 Query: 295 VIMSGTP-AESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSAD 353 +++S ++ ++ ++ + + L S+G+A LK+A+ Sbjct: 503 ILLSKLSYSDESVMVCQKLLNDFQEPFYVQSQAIYLGASLGIALAPYDGDTAEILLKNAE 562 Query: 354 LALYKAKKAGRN 365 A+Y+AKK G+N Sbjct: 563 SAMYEAKKQGKN 574 >UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRL2_PSYIN Length = 611 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 77/330 (23%), Positives = 137/330 (41%), Gaps = 16/330 (4%) Query: 41 VRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVL-VGWAFVWPHLAWQIASRAVDPLSREI 99 + + L I +L+ + +L + + +P + W I + I Sbjct: 293 IDRLLQLIFVVAGLSIFFSLIGYRDYAVILGLLSMLTSIFFPVIGWVIYLKGRSYARFYI 352 Query: 100 YNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLE 159 +W M + VL M+ + + + G + ++S + Sbjct: 353 LGWS-------IWSLGMILAVLQHIGMIPVTLYSDLSTG----LCFSIEAALLSFALA-- 399 Query: 160 LTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVY 219 N + + + L + + +L + K R ++++ D +T + Sbjct: 400 -DRFNQLRNEKEEIELIHIEHLKNDQQLLEQLVTERTEELEQAKDRAELLARTDPLTNML 458 Query: 220 NRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL 279 NRR + E R+ +++ID+DHFKSIND +GH GD A++++ L+ + Sbjct: 459 NRRAFFECGSVEIKRSLRYKSSLAIMMIDLDHFKSINDNYGHAAGDNALLSVANTLKAMI 518 Query: 280 RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR-LPNTPQVTLRISVGVAPL 338 R D+IGR GG+EFAVI+ E A R+ G+ + + + V + GV + Sbjct: 519 RNVDIIGRIGGEEFAVIIPHADLEIATELAQRLRLGIEKVEIIIDNQPVKITACFGVTSI 578 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + E LK AD ALY AK+ GRNR E Sbjct: 579 DIKSESLDEALKRADKALYLAKENGRNRVE 608 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 77/415 (18%), Positives = 149/415 (35%), Gaps = 71/415 (17%) Query: 4 KIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLV-- 61 K+ +DEN ++A A G VG+ + L Sbjct: 166 KVYDDENS-RRALAGGHLDIAL--------------------MVGMMLALVFYNGLLYFA 204 Query: 62 SHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPL-------------------------- 95 + ++ + + VW L++ + ++A + Sbjct: 205 TSKKENIYYSLYLISGLVWIALSYGLVAKAFNAYGDAVFVLNLSLITMPIFLLLFMMAIF 264 Query: 96 ------SREIY------NLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLF 143 E L + G++ + S A LM++ + R Sbjct: 265 ETHEYFRTEHRVLQGMLALLVVTFVYGLFDIATALKPASSLAALMMVVTFSVSISLFRKG 324 Query: 144 VAGLVLMVVSCLVTLELTGITVSFNSAPLE--------WWLSLPIIVIYPLLFGWVSYQT 195 + +V + G V + ++ + + + + + Sbjct: 325 HPLVKFFLVGHTFFVVFNGFAVLYYKGLVQPNYINSHGVGIGIVLEALTLAFIISYRIKV 384 Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 + + L+ ++ D +T ++NRR++ + R +++ IDIDHFK++ Sbjct: 385 LEDIRSKQDELKRQASTDPLTRLFNRRYFMAEGEYVLEQARTSGEPLSVIAIDIDHFKAV 444 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT GH+VGD +V + + R D++ RFGG+EF +++ G R+ Sbjct: 445 NDTHGHNVGDLVLVEVASVFRQFSRDRDLVARFGGEEFVILLPGADLTEGFGCAERIRNA 504 Query: 316 LNTLRLPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + + V + +SVGVA +NP + +K AD +LY+AK GRNR Sbjct: 505 VEAMVIDGGDGLAVRVTVSVGVAEVNPLLESVEGAVKRADRSLYEAKAGGRNRVC 559 >UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VMP7_9CYAN Length = 505 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 79/294 (26%), Positives = 136/294 (46%), Gaps = 12/294 (4%) Query: 86 QIASRAVDPLSREIYNLKTDAVLAGM--WVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLF 143 + L R T A G+ V V + C L GG L Sbjct: 200 WYSRDPTFDLFRYHRKTTTFAPNIGLPGRVWVSKKPEWITEISAESACCCLCAEGGLNLD 259 Query: 144 V---AGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLA 200 + G+ ++ ++ + + S P I L + +TA L Sbjct: 260 LNTGVGVPILFRDRVLAILVFFKQARSESEPRLIDFIQLIAAQLGTLMQRIKVETA--LF 317 Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 E ++L+ + T DG+TG+ NRR ++ + E+ R +L++ DID FK NDT+G Sbjct: 318 EANQKLKYLVTIDGLTGIANRRKFDQYIHREWQRLFREQLPLSLILGDIDFFKRYNDTYG 377 Query: 261 HDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 H GD+ + + ++++ + R +D++ R+GG+EFAVI+ T A+ AI + +G+ TL Sbjct: 378 HQAGDDCLRNVATKIRLLVKRPADLVARYGGEEFAVILPNTNAKGAIHVAETIRQGVETL 437 Query: 320 RLPNTPQVT---LRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTEV 369 ++P+ + + +S+GV+ L P + + AD ALY+AK GRN+T Sbjct: 438 KIPHGGSESSKYVTLSLGVSSLIPNSLVNVEGLINQADQALYRAKAGGRNQTVA 491 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 13/276 (4%) Query: 103 KTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTG 162 A AG++ V GV ++ + I+ + GG LF L + + L LE+ Sbjct: 110 MVLAYYAGVFSVVSGVALVGGSLTGFILFNERVVYGG--LFTGALATLALIILSALEVIP 167 Query: 163 ITVSFNSAPLEWW-------LSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGM 215 + L L + Y L ++ + + + ++ +ST D + Sbjct: 168 YASVIETNGTPLHHNATWLILLLGLSTPYIGLLVAMNSSAIRRWRQRESEVRQLSTTDPL 227 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRD-ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQ 274 T V NRRH L E C R +LL++D+DHFKSIND GH GDEA+ R Sbjct: 228 TQVANRRHLLERLNLEISRCERSGHSELSLLMMDLDHFKSINDEHGHLFGDEALRVTARV 287 Query: 275 LQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL--PNTPQVTLRIS 332 L+ R +D++GR+GG+EF +++ T + A+ R + L + + + + S Sbjct: 288 LREQSRNTDLVGRYGGEEFCLLLPDTGPQGALQIAERCRQALEQADIDREDGEVLHITTS 347 Query: 333 VGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 +G+A ++ L AD ALY+AK+ GRNR Sbjct: 348 IGLATYQMGDTN-ESLLHRADEALYQAKEQGRNRIV 382 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 101/183 (55%), Gaps = 1/183 (0%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 + + + T+ + RL ++T D +TG++NRR + + EF +R+ T+L++ Sbjct: 868 YAVATIRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMM 927 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DIDHFK +NDT GH VGDE + L R + LR D++GR GG+EF V++ T A A+ Sbjct: 928 DIDHFKRVNDTHGHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAME 987 Query: 308 AMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R+ + + + + + +S+G A N LK AD+ALY+AK++GRN+ Sbjct: 988 VAQRLRRAIEKASMATDAGTLRITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNK 1047 Query: 367 TEV 369 Sbjct: 1048 VVA 1050 >UniRef50_B7R5U6 PAS fold family protein n=13 Tax=Thermoanaerobacterales RepID=B7R5U6_9THEO Length = 692 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 3/203 (1%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 N ++ LSL + I + ++ + L S D +T +YNRR + M Sbjct: 493 NGHEIDVELSLSAVRIKDSWHAIGIIRDISERKRFEELLYRQSITDPLTNIYNRRFFMQM 552 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGR 287 L E + +R+ + +L++ D+DHFK++ND +GH GD + ++ ++ +R +D R Sbjct: 553 LEQEIERVKRNKKLFSLIMFDLDHFKNVNDRFGHAAGDMVLKSVADTVKGRIRKTDYFAR 612 Query: 288 FGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYRE 347 +GG+EF +++ T +A + + ++ L + S GV Sbjct: 613 WGGEEFIILLPETSLNNAAELAEELRKKISETEL--DGIGKVTASFGVTEYR-NTDTVDT 669 Query: 348 WLKSADLALYKAKKAGRNRTEVA 370 L D ALY+AK +GRN ++A Sbjct: 670 VLLRVDGALYEAKGSGRNCVKIA 692 >UniRef50_B8FCK6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCK6_DESAA Length = 301 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 76/290 (26%), Positives = 135/290 (46%), Gaps = 7/290 (2%) Query: 84 AWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLF 143 + IA A + L+ + + V + L++ ++ Sbjct: 10 SRLIAHVAKNMLTARGHEVTVATNGEEGLEAVATIKPDLILLDLIMPGMDGYAVCEKIKG 69 Query: 144 VAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKL---- 199 + V L + T V A +++ P L+ ++ +L Sbjct: 70 SPATADIPVIMLTSKAETADKVRGLEAGASDYVTKPFEE-GELVARVNTHLRIKELYESL 128 Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 E R+LQ ++ RDG+TG+YN R+++ + +F R++ + ++ DID FK NDT+ Sbjct: 129 QETNRQLQELANRDGLTGLYNHRYFQDAMTKDFQRAMRYHESLSCVLCDIDFFKKFNDTY 188 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH GD + L R ++ +LR +D+ R+GG+EFA+++ TPA +A R+ E + Sbjct: 189 GHQTGDIVLSTLARIVEDSLRDTDLAARYGGEEFALVLYHTPAAAAFMVAERLRESVEQH 248 Query: 320 RL-PNTPQVTLRISVGVAPLN-PQMSHYREWLKSADLALYKAKKAGRNRT 367 N +++ ISVGVA P + ++ ++ AD ALYKAK+ GRN+ Sbjct: 249 EFIANDLSLSVTISVGVATYPHPDIPDHKTLIECADKALYKAKENGRNQV 298 >UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U2H0_MARAV Length = 630 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 84/340 (24%), Positives = 136/340 (40%), Gaps = 20/340 (5%) Query: 42 RLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRA---VDPLSRE 98 R A+ + L +A L+ + W L + AFV ++ DP +R Sbjct: 286 RWTWAMIMTAGMLALAGLLIPYQ---WLILPSILVAFVGCSTMLMLSVVRWIKKDPAARY 342 Query: 99 IYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCL--- 155 + G+ + + +LP + G L V L + + L Sbjct: 343 YTVAWVFMLFGGIVLALSKFTMLPRNLL-----TENATQVGSALGVILLSIALADRLNRE 397 Query: 156 ---VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTR 212 + A L SL I L + L +L +S Sbjct: 398 KKKSFAAQQKLLREERKARLAQEKSLRIQQEANALLEERVQERTRDLEILNEQLLELSAT 457 Query: 213 DGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALT 272 D +TG+ NR H++ +++ + R +LLI+DIDHFK NDT+GH VGD+ + + Sbjct: 458 DPLTGLKNRGHFDKKFQSDVVHAYRFEETLSLLIVDIDHFKGFNDTYGHLVGDDCLKMVA 517 Query: 273 RQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV-TLR 330 ++ + R D+ R+GG+EF V++ TP A + E + + + QV L Sbjct: 518 DCIKQHVTRPQDLAARYGGEEFVVLLPDTPEAGACRVAELIREDIQKMAFRVSDQVLHLT 577 Query: 331 ISVGVAPLNPQMSHY-REWLKSADLALYKAKKAGRNRTEV 369 +S+GV P + + AD ALY+AK GRNR Sbjct: 578 VSIGVCSCAPSQADATKALFACADGALYRAKAEGRNRVVA 617 >UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTU2_DESBD Length = 339 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 4/210 (1%) Query: 165 VSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHW 224 + +S +V Q +L E RL +S DG+TG+ NRR + Sbjct: 125 WGMARDLTRFLVSQNALVHLNEQLEAKILQRTRELEEANHRLSELSLTDGLTGIANRRRF 184 Query: 225 ETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSD 283 + L E+ R L+++DIDHFK ND +GH GD+ + + L+ + R D Sbjct: 185 DAALAEEWSRSARTGSTLALIMLDIDHFKKYNDHYGHQQGDDCLRRVAEVLRSSARRQGD 244 Query: 284 VIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN--TPQVTLRISVGV-APLNP 340 ++ R+GG+EF +I+ T A R+ + + +P+ + + S+GV A + Sbjct: 245 LVSRYGGEEFCMILPDTALPGAFEIAERLRREVENMDMPHVLSDVGRVTASMGVAASMPC 304 Query: 341 QMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + E L+ AD +LY+AK GRN A Sbjct: 305 KAMSPAELLRRADESLYQAKSEGRNCVRGA 334 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 69/180 (38%), Positives = 99/180 (55%), Gaps = 2/180 (1%) Query: 192 SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 T+ E + RL+ ++T DG+TG+ NRR + L +E RR+ L+ ID+D Sbjct: 532 IITDTTEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDR 591 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 FK +NDTWGH VGDE + AL + +R D +GR GG+EFAV++ T E A+ R Sbjct: 592 FKRVNDTWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAER 651 Query: 312 VHEGLNTLR-LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + G+ L +T+ +S+GV+ P L+ AD ALY+AK GRNR E A Sbjct: 652 LRAGVEAAPLLTTAGPLTVTLSLGVSASPP-CDGADTLLREADRALYRAKAGGRNRVERA 710 >UniRef50_A0YVI7 Regulatory components of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVI7_9CYAN Length = 477 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 101/182 (55%), Gaps = 5/182 (2%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 ++ L E R+LQ ++ DG+T + NRR ++ L E+ C R + L++ D+D+F Sbjct: 277 HRMQIALEEANRKLQHLANIDGLTQIANRRSFDETLEQEWKRCFREQQPIALILCDVDYF 336 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 K+ ND +GH GDE ++ + + + + R +D++ R+GG+EF VI+ T A Sbjct: 337 KAYNDYYGHLQGDECLIQVAQAISQVIKRPADLVARYGGEEFVVILPNTDGSGARQVAQL 396 Query: 312 VHEGLNTLRLPNTP---QVTLRISVGVAPLNPQM-SHYREWLKSADLALYKAKKAGRNRT 367 + + + L+ P+ + +S+G++ + P + + + +AD ALY+AK+ GR++ Sbjct: 397 IQDQIRQLQSPHVKSDVSSYITLSLGISSIIPSGMTSPEQLVNAADSALYQAKQQGRDQI 456 Query: 368 EV 369 V Sbjct: 457 VV 458 >UniRef50_Q0F205 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F205_9PROT Length = 592 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 79/343 (23%), Positives = 128/343 (37%), Gaps = 23/343 (6%) Query: 32 RSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGW-AFVWPHLAWQIASR 90 RF RV + L L + L + +P + R Sbjct: 266 TRDSRFIDRVLQAVFIAGGLALLCY---LFGWRDYALKLVFLCAFLTIFYPLIGLWQYRR 322 Query: 91 AVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMC-LNLMGAGGPRLFVAGLVL 149 V G +V ++ ++ ++ + F L Sbjct: 323 GRLDAR----------------FYVAGWSVWSLAMLIAMLRNTAVIPSDFATSFAPALGF 366 Query: 150 MVVSCLVTLELT-GITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQV 208 + L++ L I N + + + V + L + R + Sbjct: 367 FIEGVLLSFALADRINRLMNEKETMELMHIEHLEQEQETLERVVLERTAALEQAMRDTEH 426 Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 ++ D +TG NRR EFD RR+N +++ID+D FKSIND +GH GD + Sbjct: 427 LARTDALTGALNRRACFESGETEFDRARRYNTPLAVVMIDLDLFKSINDNYGHATGDAVL 486 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQV 327 VA+ L+ R D IGR GG+EF V++ T + A R + L + + + Sbjct: 487 VAVVETLRGMTRTVDTIGRIGGEEFIVLLPQTSLQDAAALTERYRGAIGQLEVTLDDLAI 546 Query: 328 TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + S GVA ++ + + AD ALY+AK GRN E+A Sbjct: 547 KVTASFGVACVDVTGETLTQAIGRADAALYRAKSRGRNCIELA 589 >UniRef50_B7K319 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Cyanothece RepID=B7K319_CYAP8 Length = 660 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 12/214 (5%) Query: 166 SFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWE 225 +++ E +SL V L +L E +L ++ DG+T V NRRH++ Sbjct: 445 NYHRQWTEEEMSLLESVAAQLGIAIAHSHLLEQLKEANEKLAALANLDGLTQVANRRHFD 504 Query: 226 TMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDV 284 +L + C R + +L++ D+D+FK ND +GH +GDE ++ + + + T+ R D+ Sbjct: 505 EILAQRWKQCAREKQPLSLIMCDVDYFKRYNDFYGHQMGDECLIKVAQTIAKTVQRPGDL 564 Query: 285 IGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV---TLRISVGVAPLNPQ 341 + R+GG+EFAVI+ T + E + +L + + + IS+G+A + P Sbjct: 565 VARWGGEEFAVILPNTDVNGVKYIAQSIREQVQSLAIIHEDSPIKNQVSISLGIATIIPP 624 Query: 342 MSHYR--------EWLKSADLALYKAKKAGRNRT 367 + AD ALY+AK+ GR+R Sbjct: 625 AKTLENNHESLIKALIAQADQALYQAKEQGRDRI 658 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 79/323 (24%), Positives = 132/323 (40%), Gaps = 6/323 (1%) Query: 53 FLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMW 112 LP+ +++++G A L W A + L L +L Sbjct: 143 VLPVRCRYQFWLAGLGVFMLIMGIAAYLGQLPWAQARPVLVGLETGAMLLSLAGILVMAV 202 Query: 113 V----GVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFN 168 + +M V ++ L+ L+ G + + Sbjct: 203 LRTRSPLMTVYMVSLAVFAQASLAFLLATPWNHLWWLGHGIFAAGFFMLSYGIVQAFHTT 262 Query: 169 SAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETML 228 + + + ++ W + + ++ E R+L+ +++ D +TGV NRR Sbjct: 263 RSFSTVYSQMDMMAQLREQQAW-TQEALLQVQEANRKLEQLASTDALTGVANRRQLVERA 321 Query: 229 RNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRF 288 E RH +LL +D+DHFK IND +GH GDE + + +Q +LR SD++ R Sbjct: 322 DMEVPRSERHGAPLSLLCLDLDHFKRINDDYGHLAGDEVLKQVAEAIQQSLRPSDLLARV 381 Query: 289 GGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV-TLRISVGVAPLNPQMSHYRE 347 GG+EF V++ T A R+ L L +P V + +SVG A L P + + Sbjct: 382 GGEEFHVLLPDTDLAGARDVAERIRVKLEGLDIPVQGVVLHVTVSVGCAQLGPDGADMKS 441 Query: 348 WLKSADLALYKAKKAGRNRTEVA 370 +AD LY+AK GRNR +A Sbjct: 442 LTHTADERLYQAKALGRNRVVIA 464 >UniRef50_D0J6R3 Diguanylate cyclase n=23 Tax=Burkholderiales RepID=D0J6R3_COMTE Length = 521 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 4/234 (1%) Query: 140 PRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKL 199 + L + +V + I ++ L + ++ + + + Sbjct: 264 RLYYFKNLPSLPFIIMVAKAHSDIFTAWRKRALIIACLMGVLTAAFIGLSFAFVTQLQRR 323 Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 + L +++ DG+TG+ NRR + ML E+ RR++ +LL +DID FK NDT+ Sbjct: 324 IHAESELALLARTDGLTGLNNRRRLDEMLDQEWHRARRNHSIFSLLFVDIDRFKVYNDTY 383 Query: 260 GHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 GH GD+ I + + + + R D+ R+GG+EF V++ T E A + ++ Sbjct: 384 GHQAGDDVIATIAQCIGDNIRRPGDIAARYGGEEFIVVLPDTSLEGASCLAESIRAAVSQ 443 Query: 319 LRLPNTPQ--VTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRTEV 369 L + ++ + +S+G A P + ++SAD ALYKAK GRN+ V Sbjct: 444 LSVEHSGSEFGYITVSIGCAAWEPEHDADVASVIRSADEALYKAKTTGRNKVVV 497 >UniRef50_A0YNV2 Regulatory component of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YNV2_9CYAN Length = 456 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 13/247 (5%) Query: 135 MGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQ 194 + G +F + L + + T + + + + W S+ I + V + Sbjct: 209 ILKGSLDIFDSSLFEYFIKVVKTRHPFERDLYYETPEITAWYSVKAIPYGQGILIIV--R 266 Query: 195 TATKLA-------EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 T+ E L + D +T + NRR ++ L+ E+ +R L++I Sbjct: 267 DITERKQCELVLHETNSILYQQAITDNLTKISNRRAFDVYLKQEWKRAKREALSLALMMI 326 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAI 306 DID+FK ND +GH+ GD + + + ++ + R SD + R+GG+EFAVI+ T E A Sbjct: 327 DIDYFKRYNDHYGHEAGDRCLYTVAQTIRQAVKRPSDFVARYGGEEFAVILPNTEREGAE 386 Query: 307 TAMLRVHEGLNTLRLPNTPQV---TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAG 363 T + + ++ +LP+ + +S+G++ P + +++AD ALY+AK G Sbjct: 387 TVADSIQKAIHDFKLPHAQSPISSCITLSIGISIQIPTSEDFTILIQTADHALYEAKHQG 446 Query: 364 RNRTEVA 370 R+R +V Sbjct: 447 RDRIQVY 453 >UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W79_COLP3 Length = 334 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 66/181 (36%), Positives = 105/181 (58%), Gaps = 1/181 (0%) Query: 192 SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 + +L + + +S DG+T VYNRRHW+ L E+ RRH++ +L+++D+DH Sbjct: 150 ACHYQMQLQKTLAEIAQISRIDGLTQVYNRRHWQDSLEQEYAKARRHDKKLSLIMLDLDH 209 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 FK +ND +GH GD ++ ++ + LR D GR+GG+EFA+I+ T + AI R Sbjct: 210 FKLLNDNYGHQGGDMVLIEVSALISTLLRVEDTFGRYGGEEFAIILPETDSAGAIELAQR 269 Query: 312 VHEGLNTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + T Q + + +S+GVA L+ + S+Y E + AD ALY+AK GRN+ A Sbjct: 270 ICRIIATTPFTYNDQVIKVTVSLGVAQLSSKESNYEELITQADSALYQAKSQGRNQVCNA 329 Query: 371 A 371 A Sbjct: 330 A 330 >UniRef50_A4BG19 GGDEF domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BG19_9GAMM Length = 377 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 81/368 (22%), Positives = 154/368 (41%), Gaps = 20/368 (5%) Query: 14 KAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFL-PIASTLVSHPPPGWWWLV 72 K + +++ + RR+ + L G + + W L Sbjct: 5 KTLSWRFIERFMHAGTTEQTDIETVRRISVLNLFALVGFSISFLLGVQAILSQDIWLALA 64 Query: 73 LVGWA--FVWPHL---------AWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVL 121 L F++ H+ A+ A+R V L + L G + V +L Sbjct: 65 LFTAFALFLFAHIQLRIKRNQSAFLFAARLVQ-LVLFVLCLYLVYAGGANQTGPLWVYLL 123 Query: 122 PSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPII 181 P M + + + G + L +++ L + S+ + S + Sbjct: 124 PPVVMFL----SGLKRGMMITALFVLGYLIIVFFPGNALGAVDYSYEFKTRLLY-SFLTL 178 Query: 182 VIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 ++ + KL E K+ + +++D +T + NRR +R E +R+N+ Sbjct: 179 TFLAAVYEQSRQSSYQKLNELKQDFERQASQDTLTHLLNRRGMRERIRYEVRRSQRNNQP 238 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 T ++ D+DHFK IND +GHD GD ++ +++ LQ ++R D I R+GG+EF ++ T Sbjct: 239 ITFILADLDHFKEINDHYGHDTGDTVLIQVSQLLQDSVRQQDSIARWGGEEFLFLLPETN 298 Query: 302 AESAITAMLRVHEGLNTLRL-PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 A A+ ++ + + L + P +T +S G+A + + +++ + AD LY+AK Sbjct: 299 ARQAMQLAEKIRSIIESHPLNSDQPPLTTTMSFGIAEML-DLENHQSTIAEADNRLYQAK 357 Query: 361 KAGRNRTE 368 GRN Sbjct: 358 SQGRNCVV 365 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 103/208 (49%), Gaps = 2/208 (0%) Query: 165 VSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHW 224 V + P+ + S Q T+ + L+ ++T D +TG+YNRRH+ Sbjct: 371 VLPGGTRVWHTTLTPVYEEERITSIVGSAQDITERKRAEEHLRYLATTDELTGLYNRRHF 430 Query: 225 ETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDV 284 +L E + +R+ + L+ +DIDHFK+INDT GH VGD A+ L QL R D Sbjct: 431 MEILDTEIERAKRYEQSLALISLDIDHFKTINDTHGHAVGDAALEHLAAQLLACKRQPDS 490 Query: 285 IGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLN-PQM 342 +GR GG+EFA+I T A R+ L + + + IS+GV LN Sbjct: 491 LGRLGGEEFALIAPHTDRAGATELAERIRSELERTPIELESTSLHPTISLGVTALNIQDN 550 Query: 343 SHYREWLKSADLALYKAKKAGRNRTEVA 370 LK AD ALY+AK+ GRNRT + Sbjct: 551 DTIDALLKRADDALYEAKRTGRNRTVTS 578 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 10/227 (4%) Query: 148 VLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLA--EHKRR 205 V + + + E G+ ++ +P + + L V+ Q A +A + + Sbjct: 783 VSLCLPMMAQGETLGLLYLYSDSPDQ------LCESKRQLARTVAEQMALAIANLQLREE 836 Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 LQ S RD +TG++NRR+ E L E + R++ + +++IDIDHFK NDT+GHD GD Sbjct: 837 LQNRSIRDPLTGLFNRRYLEESLEREINRACRNDHNVGVIMIDIDHFKRFNDTFGHDGGD 896 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP 325 + + + L+ +LR SD+ R+GG+E +I+ E+ +V + + + + + Sbjct: 897 AVLKEVGKLLKSSLRASDIACRYGGEEMTLILPEASIENTYKRAEQVRKLIKQINIEHKR 956 Query: 326 Q--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 Q T+ S+GVA ++ AD ALY+AKK GR+R A Sbjct: 957 QSLGTITASLGVACFPEHGMTGDAVVQRADTALYQAKKEGRDRVVGA 1003 >UniRef50_A3WKY5 Signaling protein with a ligand-binding sensor domain and GGDEF domain n=2 Tax=Idiomarina RepID=A3WKY5_9GAMM Length = 999 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 76/248 (30%), Positives = 128/248 (51%), Gaps = 5/248 (2%) Query: 127 LMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPL 186 + N + G VS T S+ + + L L ++ Sbjct: 753 YTSLPANDYVFQVRAAYPGGAWSDPVSFAFTRSEHPWQQSWFWLSIIFALGLAATILVRA 812 Query: 187 LFGWVSYQTATK---LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDAT 243 +++ Q A +AE + L+ ++ +D +T + NRR ++ L+ EF C R + + Sbjct: 813 RIRFLNNQRAQLELMVAEKTKELKGLARQDSLTQLGNRRAFDEQLQYEFKRCERSEQPLS 872 Query: 244 LLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAE 303 L IID+DHFKSIND + H +GD+ ++ L+ L LR D I R+GG+EFA++M T A+ Sbjct: 873 LAIIDVDHFKSINDRFLHVIGDQVLIELSALLSNMLRDIDYIARWGGEEFALLMPETTAK 932 Query: 304 SAITAMLRVHEGLNTLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 A+ A R+ + + + ++ + +S+GVA + ++ L +AD ALYKAK++ Sbjct: 933 EALQAAERIRQRIEDTSYQHLADELAVTVSIGVAS-SEHYPNHSALLVAADKALYKAKQS 991 Query: 363 GRNRTEVA 370 GRNRTE+A Sbjct: 992 GRNRTELA 999 >UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUF6_COMTE Length = 373 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 94/366 (25%), Positives = 150/366 (40%), Gaps = 35/366 (9%) Query: 29 EHQRSGLRFARRVRLPRAVGLAGMFLPIAST---LVSHPPPGWWWLVLVGWAFVWPHLAW 85 + + L+ R LP G G L ++ L + W + L A V L Sbjct: 2 QVRTDQLQLLFRQSLPAPYGSVGGALALSWLQLDLGNRSVITPWLITLCLAAMVRLALF- 60 Query: 86 QIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVN--VLPSTAMLMIMCLNLMGAGGPRLF 143 + + + T A G++ + V A L+ NL+ F Sbjct: 61 -------RDYNCRLASHLTIARWEGVYFATLVFTSGVWGVGAFLLTSSNNLLSQVITLFF 113 Query: 144 VAGLVLMVVSCLVTLELTGIT-VSFNSAPLEWWLSLP------IIVIYPLLFGWVSYQTA 196 G+ +S +T V P WL + ++ + L F + Sbjct: 114 AVGMAGSAISAYSAYRYMALTAVGLVLLPTTLWLLIQPSTEQRLLALTSLAFCAFVVRAT 173 Query: 197 TKLAEHKRRLQVM--------------STRDGMTGVYNRRHWETMLRNEFDNCRRHNRDA 242 +L+ + L + + D +TGV NRR + F RR+ Sbjct: 174 RELSRALQSLLRLRRELEIQHSIASNAARTDDLTGVNNRRAFNEKAETMFAYTRRYGVPL 233 Query: 243 TLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPA 302 L+ DIDHFK INDT GH GD+ + A+ RQ++ LR +D+ GR GG+EF V+++GT Sbjct: 234 CALLFDIDHFKQINDTHGHAAGDKVLQAVVRQIKSALREADLCGRLGGEEFGVLLAGTNM 293 Query: 303 ESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKK 361 + A+ R+ + ++ P N + + ISVGVA + + LK AD A+Y+AK Sbjct: 294 QEAVQIAERIRLAVQAIKEPVNDTTLQVTISVGVAEADSACADVSTLLKQADAAMYRAKS 353 Query: 362 AGRNRT 367 GRN+ Sbjct: 354 NGRNQV 359 >UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLJ7_DESAH Length = 576 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 6/221 (2%) Query: 155 LVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDG 214 L T V + + ++ + + +T +L ++LQ + T DG Sbjct: 349 LYWESATISPVMGKDGNITHYSAVKEDITSRKKAEKLLKETQKRLETANQKLQTLVTSDG 408 Query: 215 MTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQ 274 +T + NRR ++ L E+ C+R +LL+ DID+FK NDT+GH GD+ + + + Sbjct: 409 LTMIANRRKFDEYLDQEWQRCKRAKVWLSLLMCDIDYFKHYNDTYGHQAGDDCLRKIAQA 468 Query: 275 L-QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV---TLR 330 + + +R D++ R+GG+EFAVI+S T A R+ E + L + ++ + Sbjct: 469 MEKTVVRPMDLVARYGGEEFAVILSDTGLNGACHVARRIQEDVKNLNIAHSESSVSTHVT 528 Query: 331 ISVGVAPLNPQMSHY--REWLKSADLALYKAKKAGRNRTEV 369 +S+G+ L P +K+AD ALYKAK+ GRNR E+ Sbjct: 529 LSIGITCLIPDDEDLSMDLLIKTADEALYKAKRKGRNRMEL 569 >UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX32_DESOH Length = 396 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 88/360 (24%), Positives = 149/360 (41%), Gaps = 24/360 (6%) Query: 36 RFARRVRLPRAVGLAGMFLPIASTLV--SHPPPGWWWLVLVGWAFVWPHLAWQIA----S 89 R V L + + + + LV +L + FV+ L + I Sbjct: 34 RMILLVLLVMFSPVFIGGVLLVAYLVSPEWFDRSIVIALLSLYGFVFVLLLYFILAAFHR 93 Query: 90 RAVDPLSREIYNLKTDA----VLAGMWVGVMGVNVLPSTAMLMIMCLNLMG-AGGPRLFV 144 R + N+ + V AG W + + RL Sbjct: 94 RRQKSSWPLMENIMFGSYVVIVCAGSWFTGTYYTFGALFLFFGASISSSLADIRKVRLAY 153 Query: 145 AGLVLMVVSCLV---------TLELTGITVSFNSAPLEWWLSLPI-IVIYPLLFGWVSYQ 194 +V+ +V T I + + +PL W + + I + + +++ Sbjct: 154 LASFGALVAFIVMDSSGMFRHAPLFTRIPLHPDGSPLPVWFGVQVFITVSLTIMLYITIV 213 Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRH-NRDATLLIIDIDHFK 253 T + + + MST DG+T + NRR + E + +R + + ++IDIDHFK Sbjct: 214 TFKRWGVREDVYRKMSTVDGLTRLTNRRTFIERSEKELSSGQRRPSSHISCIMIDIDHFK 273 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +INDT+GH GD+ +V + L R +D +GR+GG+EFA+++ T A+ R Sbjct: 274 AINDTYGHAAGDKVLVKIATILTEKARPTDEVGRYGGEEFAMLLPATTLAGAVKVAERQR 333 Query: 314 EGLNTLRLP-NTPQVTLRISVGVAPLNPQM-SHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + + + + S GVA + E LK+AD+ALY+AK+AGRNR AA Sbjct: 334 ASIANAEIIVDGNIIQVTASFGVASCPSDDIDNINELLKTADVALYEAKRAGRNRVVAAA 393 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 2/191 (1%) Query: 182 VIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 ++ + + + L + D +T + NR H+ E +R+ +D Sbjct: 357 ALHQPIRMIGVHANIHSRKLLELELNQKAHIDYLTELNNRGHFMEQAEKELSRSQRYQKD 416 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 + ++DID FK IND+ GH +GD + L + TLR D+IGR GG+EFA+++ T Sbjct: 417 MAMFMMDIDFFKKINDSHGHKIGDIVLKKLADVCRQTLREVDIIGRIGGEEFAILLPETN 476 Query: 302 AESAITAMLRVHEGLNTLRLP--NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKA 359 A+ R+ + ++P + V +S+GV+ + + L AD ALY+A Sbjct: 477 RAEALEVAERLRLAVADSKVPMKDGLPVQYTVSIGVSSVASADDNIDMLLSRADQALYQA 536 Query: 360 KKAGRNRTEVA 370 K++GRNR A Sbjct: 537 KQSGRNRVCAA 547 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 4/189 (2%) Query: 187 LFGWVSYQTATKLA--EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 L V+ A LA + + L S RD +TG++NRR+ E L E +RH R + Sbjct: 1152 LALTVAEHLALSLANLKLRETLSQQSIRDALTGLFNRRYMEESLEREIHRAQRHQRPMGI 1211 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 +++DIDHFK NDT+GH+ GD + L LQ ++R SD+ R+GG+E +I+ Sbjct: 1212 IMLDIDHFKHFNDTFGHEAGDAVLRELGIFLQRSIRASDIACRYGGEELMLILPDASLAD 1271 Query: 305 AITAMLRVHEGLNTLRLPNTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 ++ + L++ ++ + ISVGVA S +E + +AD ALY+AK Sbjct: 1272 TKQRAEQIRHDVKGLQIEYHHKLLDAIAISVGVAAFAEHGSTAQELIAAADRALYQAKAQ 1331 Query: 363 GRNRTEVAA 371 GR+R A+ Sbjct: 1332 GRDRVVTAS 1340 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 2/172 (1%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + + RL+ S RD +TG++NRR+ E E +R+N +++ DIDHFK ND G Sbjct: 792 KLRERLENQSIRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGDIDHFKQFNDQLG 851 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 HD GD + + R LQ +RGSD+ R+GG+E +++ T E + + + + ++ Sbjct: 852 HDAGDHVLKTIGRILQSNIRGSDIACRYGGEEMTIVLPQTSLEDTLVKAESLRQAIASME 911 Query: 321 LPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + TL +S+GVA +++AD ALY+AK AGRNR +A Sbjct: 912 VEYKGKELGTLTVSLGVACYPNHGETMVNIIQAADRALYQAKAAGRNRVVMA 963 >UniRef50_B7KGV0 Response regulator receiver modulated diguanylate cyclase n=3 Tax=Chroococcales RepID=B7KGV0_CYAP7 Length = 465 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 132/250 (52%), Gaps = 13/250 (5%) Query: 133 NLMGAGGPRLFVAGLVLMVVSCLVTLELTGIT----VSFNSAPLEWWLSLPIIVIYPLLF 188 NL+G + F++ L +++ + + TG T + +E W + + Sbjct: 204 NLIGKIMLKKFLSNLDPKLMNAFIEVVNTGNTLEKEFYYQKDNVERWYHFIALKLGDGFS 263 Query: 189 GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 ++ + T+ + +L ++ DG+TGV NRR++E L E+ R + +L++ D Sbjct: 264 --ITVRDITERKLMELKLHQLARLDGLTGVANRRYFEETLAKEWKRGIRDKQPLSLILCD 321 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAIT 307 ID+FK NDT+GH GDE ++ + + + + R +D++ R+GG+EF +I++ T + AI Sbjct: 322 IDYFKIYNDTYGHLKGDECLIRVAKAINRAVKRSTDLVARYGGEEFGIILTNTERQGAIA 381 Query: 308 AMLRVHEGLNTLRLPNTPQ-----VTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKK 361 + + +N L++P+ + +S+GVA L PQ + + SAD ALY+AKK Sbjct: 382 IAQSIQKAVNQLKIPHPNPREKNHHYIAMSLGVASLIPQKKLSPKILVASADKALYEAKK 441 Query: 362 AGRNRTEVAA 371 GRN V++ Sbjct: 442 QGRNCINVSS 451 >UniRef50_B5VVN4 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Arthrospira RepID=B5VVN4_SPIMA Length = 652 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 5/209 (2%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 + + P+ + KL + L+ +++ DG+TGV NRR ++ Sbjct: 441 TRGWQPEEIEALRSIATPIAVAIQQGELHAKLQTVNQELERLASLDGLTGVANRRQFDLH 500 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIG 286 L+ E+ R ++++ D+D FK+ NDT+GH +GDE + + + L+ R +D+ Sbjct: 501 LKREWQRLLRETAPISVIMCDVDFFKAYNDTYGHQMGDECLKQIAKILENCAQRSTDLAS 560 Query: 287 RFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP---QVTLRISVGVAPLNP-QM 342 R+GG+EF +++ T + A+ ++ + L + + + +S+GVA P Sbjct: 561 RYGGEEFVIVLPNTGIKGALQVADKIQHQIRALEIEHQKSEVSGYVTLSLGVACQVPNHD 620 Query: 343 SHYREWLKSADLALYKAKKAGRNRTEVAA 371 +K AD ALY+AK GRN A Sbjct: 621 RSPESLIKLADAALYEAKSKGRNCIIANA 649 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 3/178 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + T E +R L+ + D +TG+ NRR++ + E +RH +LL++D+DHFK Sbjct: 433 RDITDRKELERELESQARTDVLTGLNNRRYFFELAELELARAKRHGNQFSLLMLDVDHFK 492 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 ND++GH +GD + L+ TLR D+ GR GG+EFA+++ T + A+ R+ Sbjct: 493 LFNDSYGHHIGDRVLQKLSEVCMHTLREIDLSGRIGGEEFAIMLPETRGDRAMEVAERLR 552 Query: 314 EGLNTLRL---PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + + V +S+GV L + LK AD ALY AK AGRN+ Sbjct: 553 LAIAGAPVLLEQQSTFVHFTVSIGVTSLVAAGRQVDDLLKRADDALYAAKNAGRNQVC 610 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 60/179 (33%), Positives = 100/179 (55%), Gaps = 3/179 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + + +E +R+L+ + D +TG+YNRR ++ ++ + +L+++D+DHFK Sbjct: 140 RVIIEGSERQRKLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFK 199 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 NDT GH GDEA++AL + + LR D+ R+GG+EFAV++ T A S R+ Sbjct: 200 RYNDTHGHQGGDEALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLR 259 Query: 314 EGLNTLRLPNTPQVT---LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + L + + + + IS+GVA + + E + +AD ALY+AK GRNR V Sbjct: 260 TAVEALEIKDDEGNSLSGITISLGVAQTSGTVDSVSELIATADAALYQAKNQGRNRVVV 318 >UniRef50_C0QT79 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QT79_PERMH Length = 509 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 10/218 (4%) Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMST 211 + LV E F + + ++ + ++V L ++ L K R + M+ Sbjct: 291 IGYLVYYEKDNTYGVFKNTFIISYVGINLLVGLLLTMSFI-------LGVIKERFKAMAE 343 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 D +TG+YN+ + +L+ E D +R+ R +L+I DIDHFK IND +GH GD + L Sbjct: 344 IDTLTGIYNKGKFNHLLQVELDRSKRYGRPLSLIIFDIDHFKKINDAFGHQAGDYVLKTL 403 Query: 272 TRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRI 331 + + +R +D R+GG+EF ++ T E A ++ + + + Sbjct: 404 AKIVSSNIRSTDFFARWGGEEFVILAPETDLEGAQILAEKIRKAIEEYPFETVG--KVTS 461 Query: 332 SVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 S GV ++K AD+ALYKAK GRNR E+ Sbjct: 462 SFGVTEAFEN-DTVDSFVKRADVALYKAKDKGRNRVEI 498 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 103/188 (54%), Gaps = 3/188 (1%) Query: 183 IYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDA 242 + + Q +L E +RL+ + D +T V+NR H E L E C+RH RD Sbjct: 502 LAIGASAYQIEQLNQELTEANQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRHGRDL 561 Query: 243 TLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPA 302 ++++DIDHFK +ND +GHDVGD+ + ++ + LR SDV GR+GG+EF +I T Sbjct: 562 AVILLDIDHFKRVNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEEFLIIAPETDL 621 Query: 303 ESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 ESA R+ L+ L+ Q + S GVA L P +K AD ALY+ K++ Sbjct: 622 ESANQLAERLRRRLSNLQFDKVGQ--VTASFGVAELLPS-EDRNSLVKRADNALYQVKES 678 Query: 363 GRNRTEVA 370 GRN EV+ Sbjct: 679 GRNSVEVS 686 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 10/190 (5%) Query: 189 GWVSYQTAT-------KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 ++++ T L L+ ++ D +TG++NR + L +E +R+ Sbjct: 244 AVIAFRDITVQKKNLQSLEGINELLEKQASTDALTGIFNRMKFNQTLTSEIKRAKRYRVA 303 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 +L++ DIDHFK +ND++GH GD + L R + LR D+ R+GG+EF + T Sbjct: 304 LSLILFDIDHFKQVNDSYGHLSGDTVLKHLARLVASNLREIDIFARWGGEEFVIQAPETS 363 Query: 302 AESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKK 361 ESAI ++ + P + +S GVA + + AD ALY+AK+ Sbjct: 364 LESAIKLAEKLRSKIENYVFPA--PKKITVSFGVATFRSSDNDI-TLVNRADEALYRAKE 420 Query: 362 AGRNRTEVAA 371 GRN+ A Sbjct: 421 GGRNQVVSHA 430 >UniRef50_B7K273 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Cyanobacteria RepID=B7K273_CYAP8 Length = 308 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 1/177 (0%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L E + ++ ++ D +TG+ NRR + EF R+ LL+ID+DHFK Sbjct: 130 QVQKQLQEACQTMKKLADTDELTGIANRRCLLEFAQREFQRSLRYGTPFCLLMIDVDHFK 189 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 +IND +GH GD+AI + +++ LR D GRFGG+EF V++ T A+ R+ Sbjct: 190 NINDKYGHPNGDKAIQWVVEIIKLGLREVDFFGRFGGEEFIVVLPQTALGGALEVAERIR 249 Query: 314 EGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 E + + L VTL S+GVA + ++ AD +LY+AK GRN+ Sbjct: 250 EAIASQPLTLEQDTVTLTASIGVATYTGEDKTVVGMIQRADKSLYQAKAKGRNQVIA 306 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 5/182 (2%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 Q +L + + +L + DG+T V NRR +E + E+ +R R L+++DIDHF Sbjct: 319 IQILMQLKQSQDQLARSARVDGLTQVNNRREFERNIEMEWRRAQRSKRSLALIMLDIDHF 378 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 K ND +GH GD + + + ++ ++ R D++ R+GG+EF VI+ T + A R Sbjct: 379 KPFNDGYGHLAGDGCLRTVAQTIKHSIQRAQDMVCRYGGEEFVVILPETDLDGAQMIAER 438 Query: 312 VHEGLNTLRLPNTPQV---TLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRT 367 + + + L++ + T+ IS GVA L+P E + AD LY+AK GRN+ Sbjct: 439 IRKAIAKLKINHEFSSTDNTITISAGVACLSPSQEGSPHELILLADQGLYQAKAQGRNQV 498 Query: 368 EV 369 + Sbjct: 499 AI 500 >UniRef50_B4B7Z8 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B7Z8_9CHRO Length = 472 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 124/242 (51%), Gaps = 11/242 (4%) Query: 134 LMGAGGPRLFVAGLVLMVVSCLVTLELTGITVS----FNSAPLEWWLSLPIIVIYPLLFG 189 L+G ++F+ L + + V + TG + + E W + + Sbjct: 219 LIGKIMLKIFLQNLDAKLFNNFVEVVKTGKPLEKDFFYKKENDERWYHFIALKLGDGFS- 277 Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 ++ + T+ + LQ ++ DG+TGV NR ++ L E+ CRR +L++ D+ Sbjct: 278 -ITVRDITQRKLMELELQRLARVDGLTGVANRLCFDETLAKEWQRCRREQEPLSLILCDV 336 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITA 308 D+FK NDT+GH GDE ++ + + + + R +D++ R+GG+EF +I+ T E AIT Sbjct: 337 DYFKKYNDTYGHLKGDECLIEIAKAISRAVKRPTDLVARYGGEEFVIILGNTATEGAITV 396 Query: 309 MLRVHEGLNTLRLPNT---PQVTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGR 364 + E + L++P+ + + +S+GVA + P + + SAD ALY+AK+ GR Sbjct: 397 AKVIQEKVQQLKIPHQTAKDKNYITLSIGVASVIPYPKLSPKILIASADRALYEAKEQGR 456 Query: 365 NR 366 + Sbjct: 457 DC 458 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 1/215 (0%) Query: 156 VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGM 215 + +G + A ++ + + P + Y T + + L+ ++T DGM Sbjct: 111 LAWVQSGDPKPMDLAMIDGKALRCHLAVLPDGGRMLIYSDVTDIVRNAEELERLATTDGM 170 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQL 275 TG++NRRH+ T+ E+ RR+ R + L+IDIDHFKSIND +GH VGD+ IV L + Sbjct: 171 TGIFNRRHFLTLADREWARARRYGRPLSCLMIDIDHFKSINDDFGHQVGDDMIVHLAKLA 230 Query: 276 QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR-LPNTPQVTLRISVG 334 + R DV+ R GG+EFA+++ T A+ R+ + L + V +S+G Sbjct: 231 RDCKRDCDVLARIGGEEFALLLPETDLPQALAVAERLRGEVAASSLLMASGSVRATVSIG 290 Query: 335 VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 A + + +++AD ALY+AK GRNR Sbjct: 291 AATSAATIDGISDLMRAADRALYEAKHGGRNRVVC 325 >UniRef50_A4SM80 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SM80_AERS4 Length = 432 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 111/206 (53%), Gaps = 2/206 (0%) Query: 163 ITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRR 222 + + + + +++ I + + ++ A L+V +T D +TG+ NRR Sbjct: 218 MGLRRDGSEFPQEVTIAKINLGQTTEMTAILRDISERARLVEELKVAATTDPLTGIANRR 277 Query: 223 HWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGS 282 ++ +++ E C+R +LL++DIDHFK +NDT GH GD+AI++L R++ LR Sbjct: 278 RFDELVKQEVQRCQRFGHTMSLLLLDIDHFKQVNDTHGHQQGDQAILSLVRRIAKQLREV 337 Query: 283 DVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL--NTLRLPNTPQVTLRISVGVAPLNP 340 D++GR+GG+EF +++ T + A + R+ + + L ++ L +S+G++ Sbjct: 338 DILGRWGGEEFIILLPETSLDLAWASAERIRLAIASESHPLGADIEIPLTVSIGISASQG 397 Query: 341 QMSHYREWLKSADLALYKAKKAGRNR 366 + ++ AD ALY AKK GRN Sbjct: 398 PQDNVDNMVRRADTALYLAKKQGRNC 423 >UniRef50_B8FMG8 Diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FMG8_DESAA Length = 417 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 7/210 (3%) Query: 169 SAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETML 228 + + L+ I + + + + A +L + ++VMS D +T ++NRRH+ET L Sbjct: 206 NTLIASGLTAAISLSLLSMIWILVSRLARRLTKAYETIEVMSITDELTRLHNRRHFETRL 265 Query: 229 RNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRF 288 E R+ +L+I+DIDHFK +ND +GH GD + L+ +R +DV R+ Sbjct: 266 AEEISRSLRYGSPMSLMILDIDHFKRVNDNYGHQAGDWVLTQFATLLKDNVRKADVPARW 325 Query: 289 GGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL--PNTPQVTLRISVGVAPL-----NPQ 341 GG+EF VI++ + A A +V + + P+ + + +SVGVA L + Sbjct: 326 GGEEFVVILTESTISQARMAAEKVRRNVESAEFNIPDGRSIPVTVSVGVASLDMISGDEM 385 Query: 342 MSHYREWLKSADLALYKAKKAGRNRTEVAA 371 S +K+AD ALY+AK+ GRNRT + Sbjct: 386 GSEADVLVKTADDALYRAKQEGRNRTVAVS 415 >UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8W1_MAGSM Length = 564 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 4/184 (2%) Query: 189 GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 T +++L+ +ST DG+T + NRR + +L E R+ + ++L++D Sbjct: 377 SAALILDVTDEKRLEQQLRELSTTDGLTKLINRRRMDELLDEELKRAVRYGLNLSILLLD 436 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 +DHFK NDT+GH+ GD ++AL +++ R D R+GG+EF VI+ T A+ AI Sbjct: 437 VDHFKKFNDTYGHEQGDHVLIALAAEMKSYFRNIDYPCRYGGEEFFVILPNTDADGAIKV 496 Query: 309 MLRVHEGLNTLRLPNTPQVTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRT 367 R+ E + + + + IS+GVA ++ +++AD ALY AK+ GRN+ Sbjct: 497 ADRLRERVAEKEV---DGLRVTISIGVASYPDLSITRPDAMVRAADSALYVAKEQGRNKV 553 Query: 368 EVAA 371 A+ Sbjct: 554 VYAS 557 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 2/183 (1%) Query: 185 PLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 + ++ Q T+LA ++++L M+T D +TGVYNRR E+ L+ E D R++R +L Sbjct: 116 AITSLFLIVQDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPFSL 175 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 ++IDID FK +NDT GH GD + + +R SD + R+GG+EF ++ T ++ Sbjct: 176 MMIDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDCDA 235 Query: 305 AITAMLRVHEGLNTLR-LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAG 363 A T + + + L + + IS+G+A P +K AD ALY+AK++G Sbjct: 236 AETVAEHLRAHIENMEHLFQKKVIRVTISLGIACFAPD-DSPETLVKRADEALYQAKRSG 294 Query: 364 RNR 366 RNR Sbjct: 295 RNR 297 >UniRef50_A7BWA5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Beggiatoa sp. PS RepID=A7BWA5_9GAMM Length = 578 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 4/180 (2%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L + LQ + + D +T + NRR ++ E+ +R + TL++ D+D FK Sbjct: 380 QIEQELHKTNEELQRLVSLDSLTNIANRRRFDEHFDQEWKRSKREKKPITLIMCDVDFFK 439 Query: 254 SINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 NDT+GH +GD+ + + + + + R SD++ R+GG+EFAVI+ T E A+ + Sbjct: 440 LYNDTYGHQLGDKCLRVIAKAISKQIKRPSDLVARYGGEEFAVILPNTKPEGAVKVAEAI 499 Query: 313 HEGLNTLRLPN--TPQVTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTEV 369 L L++ + +P + +S+GV+ L + + L AD ALY+AKK GRNRT + Sbjct: 500 RLELEHLKIAHLSSPNKIVTLSLGVSSLPTRPPFSQKILLTLADKALYEAKKRGRNRTVL 559 >UniRef50_Q04S93 GGDEF domain receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04S93_LEPBJ Length = 330 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 19/204 (9%) Query: 182 VIYPLLFGWVSYQTATKLAEHKRRLQVM--------------STRDGMTGVYNRRHWETM 227 ++ + ++ T+ E ++ L+ + S D +TG+YNRR++ + Sbjct: 119 LLARVRSALRLFEEMTRRKEREKELEKLTDQLQEVNSYLVAISRTDSLTGLYNRRYFYEI 178 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIG 286 L E+ C R L+++DIDHFK NDT+GH GD+ + + R ++ R DV Sbjct: 179 LTTEWKRCWRTGAGIALIMLDIDHFKLYNDTYGHQGGDQCLKQVARAIRDCARRAGDVAA 238 Query: 287 RFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNPQMS 343 R+GG+EFAVI+ T +A+ + E + + +P++ T + +S+G+A L+P Sbjct: 239 RYGGEEFAVILPETNESNAVVVSRNILENVEKMAIPHSASKTNSIVTVSIGMATLSPSPE 298 Query: 344 -HYREWLKSADLALYKAKKAGRNR 366 E ++ AD ALY AK+ GRN Sbjct: 299 NSITELIERADKALYLAKEEGRNC 322 >UniRef50_A1SRM4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRM4_PSYIN Length = 1078 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 107/194 (55%), Gaps = 3/194 (1%) Query: 176 LSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNC 235 +S I++ + T+ + + +++++T D +TG+ NRR + T L +E + Sbjct: 887 ISSAAIILDGRTIMVGFFHDVTERKKVEEEIKLLATTDSLTGIANRRAFSTHLASELERS 946 Query: 236 RRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAV 295 R+ +L++ DID+FK +ND +GHD GD+ + AL+ ++ +R D++ R+GG+EF + Sbjct: 947 NRYGTPLSLVMFDIDYFKKVNDNFGHDAGDDVLQALSELVKRNIRAVDIVARWGGEEFML 1006 Query: 296 IMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLA 355 +M + +A A+ ++ ++ P +L +S G+ + +LK D A Sbjct: 1007 LMPESDISAATAAIEKLRREISD--FPFGQVGSLTVSFGITVFVLNEDS-KVFLKRVDDA 1063 Query: 356 LYKAKKAGRNRTEV 369 LY+AK+ GRNR E+ Sbjct: 1064 LYQAKEKGRNRVEI 1077 >UniRef50_C0QMB4 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic substrate binding component n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QMB4_DESAH Length = 404 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 78/366 (21%), Positives = 154/366 (42%), Gaps = 31/366 (8%) Query: 35 LRFARRVRLPRAVG-------LAGMFLPIASTLVSHPPPGWW--------WLVLVGWAFV 79 + F R+ PR V + F I +V + + +L+ Sbjct: 1 MEFKRQRFTPRMVTDLRHRAFVGIGFYIITLVVVLTTSGYYLRYPQFSSQFFLLISGICF 60 Query: 80 WPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPS------TAMLMIMCLN 133 + + I L R ++ + +G + + +LM++C Sbjct: 61 FRFVHHLIDRWIPLTLYRVSLAFFLGSICLTGLIWGIGFSKIILQEGEQNFHILMVICTI 120 Query: 134 LMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFG---- 189 + +GG +V L V + L + ++ + L + ++Y + Sbjct: 121 GLCSGGVVAYVPSFWLAVAFDIAILGPGIVAMAVGQIYSSLMILLVLYLVYMIFMALRGN 180 Query: 190 ---WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 W + + L E R ++++ RDG+TG+YNRR+++ E++ R+ ++++ Sbjct: 181 REYWNALENEFLLEEKTRAIELLGQRDGLTGLYNRRYFDDAFEYEWNRAIRNRTAISIVM 240 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESA 305 DID+FK +ND +GH GD + L+ + R +D++ R+GG+EF ++ E+ Sbjct: 241 CDIDYFKRVNDAFGHLAGDAYLRLTADVLKQVVRRETDIVARYGGEEFIFLIPDDSLENT 300 Query: 306 ITAMLRVHEGLNTLRLPNTPQ-VTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAG 363 + R+ + + L Q + +S+GVA L+P+ + +AD A+Y+AK G Sbjct: 301 VGLAERIRQMMENTALTFDGQIIRATVSLGVARLSPRPFEKKETIVSNADNAMYQAKSRG 360 Query: 364 RNRTEV 369 RNR Sbjct: 361 RNRVVA 366 >UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C2A6_ACAM1 Length = 420 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 5/180 (2%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T KL E ++L +++ D +TG+ NRR ++ L+ + +R + +LLI DID FK Sbjct: 236 TNKKLDEANKQLSLIANHDALTGLANRRRFDEYLQQIWKQTQREQQPLSLLICDIDFFKQ 295 Query: 255 INDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 NDT+GH GD + + +++ T+ R D++ RFGG+EFA+++ T E R+ Sbjct: 296 YNDTYGHLEGDICLRTVAQKIHQTIVRPLDLVARFGGEEFAIVLPNTDLEGGQVVAERLR 355 Query: 314 EGLNTLRLPNTPQVT---LRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTEV 369 + +LP+ + +S+G A + + + AD ALY+AK++GR++ Sbjct: 356 MIIQKSQLPHRGSSVSEFVTVSIGAATVRSHPHTSVSSLISRADQALYQAKQSGRDQVVA 415 >UniRef50_A3J836 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J836_9ALTE Length = 588 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 68/332 (20%), Positives = 126/332 (37%), Gaps = 14/332 (4%) Query: 48 GLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSR------EIYN 101 G+ L + P L + R + Sbjct: 242 GIGMALLWPEAVGWQQWAPPLLMLCFASSGLAFATNFLSTKRRQPRLHRTFQTIGVAYFA 301 Query: 102 LKTDAVLAG-----MWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLV 156 L G + + + + + M + G R F+ G + VV + Sbjct: 302 LFVVCFALGEQGLALRLAFLVAPLFSVLMLYMGASSWVAGNQFARYFMLGTLASVVGASI 361 Query: 157 TLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMT 216 T +T L ++ +++ +L K E + + + D +T Sbjct: 362 TAST--VTGMIPYTQLGYYAVDIGMIVDAILLMLALADLVRKNEEARTAAEQNAQTDLLT 419 Query: 217 GVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ 276 G+ NRR + + + + R NR+ + +IDID FK+IND +GH VGD+ + + +L Sbjct: 420 GLSNRRGFLPVAESLWSLVTRKNRNVCVAMIDIDRFKNINDQYGHAVGDKVLKVIADELY 479 Query: 277 ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ-VTLRISVGV 335 + R D++ R+GG+EF +++ T A+ R + L + + + IS+GV Sbjct: 480 RSRRRGDLLARWGGEEFTLLLPETSEAEALKVAERFRHNIEQLVTNDRGRVIQCTISIGV 539 Query: 336 APLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + + + + AD LY+AK GRN+ Sbjct: 540 TSRHSEHVTLDQAIARADEELYRAKLQGRNQV 571 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 151/335 (45%), Gaps = 10/335 (2%) Query: 38 ARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIA-SRAVDPLS 96 R + +G ++ + + +V V + +++ + + Sbjct: 18 IRLIYSFTILGTIALYTFSFIHFIGKEYSIALFEFIVATGAVLNLILLKVSDGKLIRVAE 77 Query: 97 REIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLV 156 I + + G + + ++ L G + L++++V V Sbjct: 78 NFILIGMIILLTGIIIHGGIANTAIYWIYTYPLLSFFLKGNRVGLFWNITLIVVIVILAV 137 Query: 157 TLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMT 216 +L + + ++ + LS + + ++Y + L +++ ++T D +T Sbjct: 138 LNKLNIVPIPYSPDEIRQALSAYV------VIMVLAYVFESALLSSYEKIKKLATTDPLT 191 Query: 217 GVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ 276 G +NR L E + +R+ +L++ DID+FKSINDT+GH++GD+ + ++ Sbjct: 192 GAFNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDTYGHNIGDQVLKITIDTIK 251 Query: 277 ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVA 336 +R +D +GRFGG+EF +I G E A ++ + + +++ P++ ISVGVA Sbjct: 252 NHIRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKDIKVEGIPEI--TISVGVA 309 Query: 337 PLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 P +++K AD+ALY AKK G+NR E+ + Sbjct: 310 EYFPD-ESITDFIKKADIALYSAKKKGKNRVEIYS 343 >UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087A8_SHEFN Length = 321 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 98/187 (52%), Gaps = 2/187 (1%) Query: 184 YPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDAT 243 L+ T + +L+ ++ D +TG++NRR + + +EF R+ + + Sbjct: 137 GTLIGLIGISTDITAAYHLRSKLERLANTDPLTGLFNRRSFTSFCEHEFFRATRYFQPFS 196 Query: 244 LLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAE 303 L+IIDID FK +NDT+GH VGDE I + +R +DV+ R GG+EFA+++ T + Sbjct: 197 LMIIDIDLFKKVNDTYGHLVGDEVIKRVANICNEHVREADVLARIGGEEFAILLPDTDID 256 Query: 304 SAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAG 363 SA R+ E + ++ IS+GVA L Q + E K AD ALY +K G Sbjct: 257 SAYVLAERLREA--QQQYEEQKTPSITISIGVATLRSQDKAFLEIFKRADKALYSSKNVG 314 Query: 364 RNRTEVA 370 RN VA Sbjct: 315 RNSVNVA 321 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 2/179 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 +L L+ +S D +T ++NRRH M+ EF R +L+I+DID+FK Sbjct: 127 LQDELKRSNEMLRTLSITDPLTHLHNRRHLMEMVDKEFQRSSRKGAPLSLVILDIDYFKK 186 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 INDT+GH GD + L ++ LR D+ R+GG+EF +++ TP + A++ R+ Sbjct: 187 INDTYGHQEGDRVLTILADIVRRRLRSYDLAARYGGEEFVLLLPETPVQEALSIAERLRL 246 Query: 315 GLNTLRLPNT-PQVTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + + + IS+GVA + + AD ALY+AK+ GRNR E+ A Sbjct: 247 EVQEHVFEGSLGGLVITISLGVATYPSSRVESIDSLFRQADEALYRAKQGGRNRVELMA 305 >UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWB7_DESAC Length = 513 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 5/185 (2%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 + ++ + LQ+ S D +T V NRR ++ L++E+ RR+ +LL+I Sbjct: 327 LSQTANHMLDRIESLNKELQLASMTDSLTRVGNRRQFDEHLQHEWLIARRNGTVVSLLMI 386 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAI 306 DIDHFK NDT+GH GD+ + ++ + + R +D++ R+GG+EFAVI+ P A Sbjct: 387 DIDHFKLYNDTYGHQDGDQCLQSVAEVISNQVKREADLVARYGGEEFAVILPDVPLIGAQ 446 Query: 307 TAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKA 362 R+ + +N L +PN + + +S+G ++PQ E ++ AD ALY+AKKA Sbjct: 447 KVAERIRQAINDLGIPNVDALKTPWITVSIGYESMSPQSGQDCEELIRFADQALYRAKKA 506 Query: 363 GRNRT 367 GRN Sbjct: 507 GRNCI 511 >UniRef50_Q1Q3F0 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3F0_9BACT Length = 344 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 5/185 (2%) Query: 186 LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 L V +T +L + +L +S D +TG+ NRR ++ ML NE+ R + +LL Sbjct: 156 LTLAQVLEKTNQELQQANEKLHQLSRTDSLTGLANRRFFDEMLHNEWKQSVRLAKPLSLL 215 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAES 304 +IDID FK+ NDT+GH GDE + ++ + L R D+I R+GG+EF ++S T Sbjct: 216 MIDIDFFKNYNDTYGHQKGDECLKRVSMAILSALKRECDIIARYGGEEFVALLSDTDESG 275 Query: 305 AITAMLRVHEGLNTLRLPNTP---QVTLRISVGVA-PLNPQMSHYREWLKSADLALYKAK 360 A+ + + + +P+ + +S+G++ + S + + AD ALY AK Sbjct: 276 AVMVAKAMQSNIEAMNIPHKDSNASGRITVSIGISNEVPSAASSPEKLISKADKALYLAK 335 Query: 361 KAGRN 365 GRN Sbjct: 336 YEGRN 340 >UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N492_9GAMM Length = 509 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 4/180 (2%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + T+ + + LQ MS DG+TG+ NRR ++ L +E+ R+ + ++++DID FK Sbjct: 325 EDITEKMKLQSLLQEMSYMDGLTGIANRRRFDDFLTHEWYRAARYAKPLAIIMMDIDFFK 384 Query: 254 SINDTWGHDVGDEAIVALTRQLQIT-LRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 ND+ GH GD+A+ + L+ LR +D++ R+GG+EF I+ T A + Sbjct: 385 RYNDSLGHLAGDDALKRVVHALKSRVLRRTDLLARYGGEEFICILPDTNVIDATLFAETL 444 Query: 313 HEGLNTLRLPNTP---QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + L+LP+ + ISVGVA P+ L AD ALY+AK GRNR EV Sbjct: 445 RQAVCALQLPHPDSNISSFVTISVGVACCTPREGEPSNLLGLADEALYRAKTLGRNRVEV 504 >UniRef50_Q47FN5 Response regulator receiver modulated diguanylate cyclase n=3 Tax=Betaproteobacteria RepID=Q47FN5_DECAR Length = 313 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 5/203 (2%) Query: 173 EWWLSLPIIVIYPLLFGWVSYQTATK-LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNE 231 E L I + ++ S T+ L + L +S+ D +TGV NRR+++ + E Sbjct: 108 EIVLGAKIRAMQRIVLMRASLLAVTRKLDAANQELIRISSTDSLTGVANRRYFDEAMSIE 167 Query: 232 FDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGG 290 + RRH+ LL+ DID+FK NDT+GH GDE + + + R SD + R+GG Sbjct: 168 WRRARRHSNSIALLMCDIDYFKLYNDTYGHQAGDECLRKIAAAISRHTERPSDTVARYGG 227 Query: 291 DEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN--TPQVTLRISVGVAPLNPQMSH-YRE 347 ++FAVI+ T A+ ++ + L + + +P + +S+G+A P + + Sbjct: 228 EKFAVILPETSIGGALMVAEKIRQATKELNITHASSPTGQVGLSIGIASAAPGFDNPPDD 287 Query: 348 WLKSADLALYKAKKAGRNRTEVA 370 + +AD ALY+AKK GR+R A Sbjct: 288 LILAADKALYRAKKEGRDRVYRA 310 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 4/183 (2%) Query: 191 VSYQTATKLAEHKRR--LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ Q +A R L+ S RD +TG++NRR+ E L E +R ++++D Sbjct: 1196 VAEQIGMAIANLNLRATLEHQSIRDPLTGLFNRRYLEEYLSQEIARAQRQKHPIGVIMMD 1255 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 ID+FK NDT+GHD GD + + L+ +R DV R+GG+E +I+ G+ E+ Sbjct: 1256 IDNFKHFNDTFGHDAGDYVLQKVGELLKQKVREYDVACRYGGEEMTLILPGSSLENTSMR 1315 Query: 309 MLRVHEGLNTLRLPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 ++ E + +L + + Q ++ S GVA S + +++AD ALY+AK GRNR Sbjct: 1316 AEQIREAIASLVVASGGQHLGSITASFGVAAFPKHGSIGIDLIQAADAALYRAKADGRNR 1375 Query: 367 TEV 369 + Sbjct: 1376 VVI 1378 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 2/200 (1%) Query: 170 APLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLR 229 L+ +I Y L ++A + E ++ +T D +TG+YNRR + + Sbjct: 93 DGLDLGAVDYVIKPYSLSVLLARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQ 152 Query: 230 NEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFG 289 E + +R+ DA+ +I+DIDHFK +ND +GH VGD+ + L + + T R D+ RFG Sbjct: 153 RELERVQRNETDASFIILDIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKVDLCCRFG 212 Query: 290 GDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT-PQVTLRISVGVAPLNPQMSHYREW 348 G+EF + + T E A+ R + + L + + IS+GV+ N + + Sbjct: 213 GEEFVICLPDTDTEGALLVAERTRKKVEELSFNTEKGPLHVTISLGVSSANEN-TTLEDM 271 Query: 349 LKSADLALYKAKKAGRNRTE 368 LK AD ALY+AK+ GRNRTE Sbjct: 272 LKRADDALYQAKQNGRNRTE 291 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 3/178 (1%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 V + T+ + L+ S RD +T +YNRR +L E RRH TL+++DID Sbjct: 314 VEFADITERTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDID 373 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAML 310 HFK INDT+GHD GD + + + LR +D++ R+GG+EF + T + A Sbjct: 374 HFKRINDTFGHDSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAE 433 Query: 311 RVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 ++ + P + ISVG+ L +K AD ALY AK+ GRNR Sbjct: 434 KIRSSIAMFSFPTVG--AVTISVGI-SLLESKDDINALIKRADTALYAAKEMGRNRVV 488 >UniRef50_Q0VQ38 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VQ38_ALCBS Length = 364 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 86/349 (24%), Positives = 146/349 (41%), Gaps = 11/349 (3%) Query: 31 QRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASR 90 + A G + +A+ + P L+++ F + + I+ + Sbjct: 17 RLKRQLMAFYSYCLLWAGTFIG-VELAAFEPNTPTLALLALIVIINVFFYLLIRTGISEQ 75 Query: 91 AVDPLSREIYNL--KTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLV 148 DP + + + +L M+M + + L A Sbjct: 76 FRDPSLTIVQMAAGILLTTAILHYSRELRGAMLSIYFMVMTFGVLALDRRRMLLIAAFTQ 135 Query: 149 LMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQV 208 L S L+ + S + WL L + + + + G + +++ E +RRL Sbjct: 136 LCFTSLLIYEWFEAPQQAIFSYLVGHWLILALGLGWFIYMGGYIHNLQSRVREQRRRLHE 195 Query: 209 -------MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 ++ RD +TG+YNRRH+ L E R N L IID+DHFK +NDT+GH Sbjct: 196 AHNRLSAIAVRDDLTGLYNRRHFLERLEEEMSRANRENNPLHLAIIDLDHFKQVNDTYGH 255 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 GD+ + + + LR SD++ R+GG+EF V+ T ++ AM R+ Sbjct: 256 HAGDDVLHRFAQLAAMGLRKSDLLARYGGEEFVVLFPHTSTQACQAAMERLRNRFAQQHY 315 Query: 322 PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + + S G+ P P E++K AD ALY+AK GRNR ++A Sbjct: 316 SFSGDLRSKFSAGLTPYQP-GESAEEFIKRADRALYQAKDLGRNRIQLA 363 >UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepID=Q21NS3_SACD2 Length = 319 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 63/174 (36%), Positives = 99/174 (56%), Gaps = 1/174 (0%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 ++ +L +S DG+TG+ NR+ WE E+ +RH +L++ DIDHFK+IND Sbjct: 144 QIQAANLQLHEISRTDGLTGLLNRKTWELDAEQEYKRFKRHEHPCSLVMFDIDHFKNIND 203 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 ++GH GDE I ++ +R D+ GR+GG+EF +++S T E A+ R+ + Sbjct: 204 SYGHPAGDEVIRQTAAAVKSCIRDIDIAGRYGGEEFTIVLSDTDTEGALVVAERIRNQIQ 263 Query: 318 TLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L + + +S+GVA L QM++ W+ AD ALY+AKK GRN + V Sbjct: 264 ELTVHYEDFAIQFTVSLGVAQLTQQMTNRTAWIDCADKALYQAKKNGRNNSVVY 317 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 26/286 (9%) Query: 112 WVGVMGVNVLPSTAMLMIMCLNLMGAGGPR--LFVAGLVLMVVSCLVTLELTGITVSFNS 169 W ++ + S + ++ + + G + ++ +SCL T + Sbjct: 177 WWRLLTEYLSISLFLGAVLWMLVQNIRGYMPLQYGIAMIWFALSCLSFSIGTVWDHQWWL 236 Query: 170 APLEWWLSLPIIVIYPLLFGWV-----------------------SYQTATKLAEHKRRL 206 A + + ++ + S + +L ++L Sbjct: 237 AHIIFASGFLLLSFGVVQAFLTTGSFKTIYSQTELFQQIIREKKKSERALIELKAVNQKL 296 Query: 207 QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDE 266 + ++ D +T V NRR + E R++ D L++ID DHFK IND +GH GD+ Sbjct: 297 EELAATDSLTRVANRREFMKRSEEEMSRSSRNSTDLCLMVIDFDHFKEINDQYGHQAGDK 356 Query: 267 AIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL-PNTP 325 + + + +R SD++GR GG+EFA+++ T SA+ R+ + + + + Sbjct: 357 VLKDFVKLAKEVMRPSDLLGRIGGEEFALLLPETNIRSAVKVAERLRQHIEEESIVIGSK 416 Query: 326 QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 ++ L IS+GVA P++ ++WL AD LY+AK GRNR V A Sbjct: 417 RIKLTISIGVAEYQPKVDTVKKWLHRADEFLYQAKDKGRNRVVVEA 462 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 4/184 (2%) Query: 191 VSYQTATKLAEHK--RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ Q A +A LQ S RD +TG+YNRR+ E +L E +R ++++ID Sbjct: 1429 VAEQVALAIANLNLRETLQYQSIRDPLTGLYNRRYLEEVLTQEIARGQRRQHPISVVMID 1488 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 +D+FK NDT+GHDVGD + + L+ T+RGSD+ R+GG+E +I+ + E Sbjct: 1489 VDYFKRFNDTYGHDVGDYVLQTIGAMLKETVRGSDIACRYGGEEMTLILPESSLEETTIK 1548 Query: 309 MLRVHEGLNTLRLPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + E + L L Q L IS+G+A + +++AD ALY+AK AGRN+ Sbjct: 1549 AEEIREAIAQLTLAYNGQHLGKLTISLGIAGFPKHGTTGIALIQAADAALYRAKAAGRNQ 1608 Query: 367 TEVA 370 VA Sbjct: 1609 VVVA 1612 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 80/369 (21%), Positives = 133/369 (36%), Gaps = 15/369 (4%) Query: 15 AAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMF---LPIASTLVSHPPPGWWWL 71 + G + + SG+R L G + + Sbjct: 18 SLVFGLGMFAYSREHAKFSGIRTMGAGYLLIGGGCVLLGLRHFIYDFVSIVLANTAIIIG 77 Query: 72 VLVGW--AFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTA---M 126 V++ + F + ++ + L + L V + A + Sbjct: 78 VVLIYRGLFRFRGISLRHERWLSTTLVLVLAALMYVYTFHIPDVNLRIQAFSIVFAAACL 137 Query: 127 LMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEW----WLSLPIIV 182 + R+ L+ M + + P ++ WLS IV Sbjct: 138 IGATGFLRHRESHNRMAGKMLIAMFLLVSAFFIFRFFRSFYEVPPEDFMNAGWLSALAIV 197 Query: 183 IYPLLFGWVSYQTA-TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 L S+ T E + L ++ D +TG+YNRR ++ EF +R Sbjct: 198 AGEFLVILSSFCTIWMASDELQDELSEIARIDPLTGLYNRRAFDECCDIEFSRAQRSGAP 257 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 +++ D+DHFK +ND +GH VGDE + L+ +R DV+ RFGG+EF +++ G Sbjct: 258 FAIIMCDLDHFKRVNDRYGHHVGDEVLRRFANTLKEHIRKHDVVARFGGEEFVLLLPGKD 317 Query: 302 AESAITAMLRVHEGLNTLRLPNTPQVTLR--ISVGVAPLNPQMSHYREWLKSADLALYKA 359 E + ++ ++ V L S GVA + + L AD ALY A Sbjct: 318 TEQGLEVAEKLRAKTADTQITIGDDVCLTLSASFGVAHYDSSDREWSAVLHRADNALYAA 377 Query: 360 KKAGRNRTE 368 KK GRNR Sbjct: 378 KKQGRNRVV 386 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 68/178 (38%), Positives = 107/178 (60%), Gaps = 2/178 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T+ E + +L+ M+T D MT + NRR++ ++++E + R++R +L++ D+D FK+ Sbjct: 656 DVTESREKENQLRRMATTDDMTKLNNRRYFIELVKSEIERSIRYSRPLSLVMFDVDKFKA 715 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 +NDT+GHDVGD + A+ + LR D+IGR GG+EFAV + T + A+ R+ Sbjct: 716 VNDTYGHDVGDMVLKAIAATAKGVLRDVDIIGRLGGEEFAVGLPETDLKGAMLLAERLRV 775 Query: 315 GLNT--LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 L + LP+ V +S+GVA L+ ++ LK ADLALY AK+ GRNR E Sbjct: 776 VLEEASVELPDGGIVDFTVSLGVAVLDRSITDVDVLLKHADLALYAAKENGRNRVEAY 833 >UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489Q4_COLP3 Length = 451 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 61/176 (34%), Positives = 102/176 (57%), Gaps = 2/176 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T+L + K ++++ D +T +YNRR + E+ +R++ TL+ IDIDHFKS Sbjct: 274 DVTELFKLKEEFKLLANTDPLTNLYNRRFFIEQAEKEYQRAKRYSLSMTLISIDIDHFKS 333 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 IND +GH GD+ ++ + +QL+ +LR +D++ R GG+EF++++ T A SA+T R+ E Sbjct: 334 INDQFGHPAGDQVLIEIAKQLKASLRQTDILARIGGEEFSILLPETSAMSAMTFAERIKE 393 Query: 315 GLNTLRLPNT--PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + L + ++ L +S+GV+ L + AD ALY+AK GRN Sbjct: 394 EQSRLIITGDWQGEINLSVSIGVSSLIASDKAFDVLFSRADKALYQAKNTGRNTVC 449 >UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIF2_SYNFM Length = 352 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 5/207 (2%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 +S PL I + L + KL E R+L+ ++T DG+T V NRR + Sbjct: 141 HSFPLRDSSGQVIGSVGILTDITRRKKMEAKLRELNRKLERLATLDGLTRVANRRSLDRF 200 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIG 286 L E+ RR L++ DIDHFK NDT+GH GD+ + A+ ++ R D++ Sbjct: 201 LDLEWRRTRRERAPMALILSDIDHFKLYNDTYGHLAGDDCLRAVATAIKECAKRPMDLVA 260 Query: 287 RFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNP-QM 342 R+GG+EFAV++ T A+ A+ + + LR+ + T L +S GVA + P + Sbjct: 261 RYGGEEFAVVLPNTNADGAVHIAETICREVENLRVRHPESSTGEFLTLSCGVAAMVPREE 320 Query: 343 SHYREWLKSADLALYKAKKAGRNRTEV 369 S + +AD ALY+AKK GRNR + Sbjct: 321 STPEALVAAADEALYEAKKQGRNRVVL 347 >UniRef50_C0QC96 Sensory box histidine kinase (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC96_DESAH Length = 1268 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 4/217 (1%) Query: 153 SCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQT-ATKLAEHKRRLQVMST 211 FN + +L + ++ +LF ++AE +L+ +S Sbjct: 1052 GIYQKWVTLRFEHRFNYKNMWRYLFITALLFSGILFWNRKLSAFNRQMAEANAKLEQLSV 1111 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 D +TG+YNR + L E R+N +L+++DID FK +NDT GH GD ++ + Sbjct: 1112 TDRLTGLYNRMKIDDTLLEEIGRVLRYNYPLSLILMDIDLFKQVNDTHGHQAGDAVLIQM 1171 Query: 272 TRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRI 331 + + +R +D+ GR+GG+EF VI T + A++ + E + P+ +T Sbjct: 1172 AKTMDKNIRSTDICGRWGGEEFMVICPHTDLKGALSLAEHLRESIARQIFPHV--ITQTG 1229 Query: 332 SVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 S GVA + + AD A+Y AK+ GRNR E Sbjct: 1230 SFGVAQY-GNGDSEADLIARADRAMYLAKEGGRNRVE 1265 >UniRef50_B4UA43 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA43_HYDS0 Length = 610 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 3/181 (1%) Query: 189 GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 ++ TK E L S D +TG+YNRR+ + L + +R+ R ++++ D Sbjct: 432 AVFTFVDITKEKELSELLLKQSIEDTLTGIYNRRYLKDKLERHVNLAKRYERPLSVIMFD 491 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 ID FK INDT+GHDVGD+ ++A+++ + +R +D+ R+GG+EF ++ T E A Sbjct: 492 IDFFKHINDTFGHDVGDKVLIAISKVVSENIRNTDIFARYGGEEFIIVAPETTKEDAKIL 551 Query: 309 MLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 ++ + L + + S GV L + LK D ALY+AK+ GRNR Sbjct: 552 AEKLRSLIRNLHFEEG--INVTCSFGVVSL-EKPDTKETLLKRVDNALYEAKRTGRNRVV 608 Query: 369 V 369 V Sbjct: 609 V 609 >UniRef50_A1WTZ7 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Proteobacteria RepID=A1WTZ7_HALHL Length = 308 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 6/209 (2%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 LE I + + L L+ +S RDG+T + NRR + Sbjct: 99 EEHGLELGAMDYITKPFSPRITRTRVRNHVDLKRKTDALERLSQRDGLTDLPNRRVLDRQ 158 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQIT-LRGSDVIG 286 L E+ C+R + +++++DIDHFK ND +GH GDE + + R L R +D++ Sbjct: 159 LPEEWSRCQRGDTPLSVIMMDIDHFKPYNDHYGHGAGDECLRRVARVLANVPSRTTDLVA 218 Query: 287 RFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNPQM- 342 R+GG+EF ++ T A A R + L+LP+ T + +SVGVA Sbjct: 219 RYGGEEFIALLPYTDAPDAWQMAERFRAAVAALQLPHGHSSTDGIITMSVGVASHTADRP 278 Query: 343 -SHYREWLKSADLALYKAKKAGRNRTEVA 370 + L++AD ALY AKKAGRNR + A Sbjct: 279 YDSPEQLLEAADQALYAAKKAGRNRVQAA 307 >UniRef50_B1XII1 PleD protein n=3 Tax=Bacteria RepID=B1XII1_SYNP2 Length = 516 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 144/345 (41%), Gaps = 19/345 (5%) Query: 42 RLPRAVGLAGMFLPIAST------LVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPL 95 + L S P +L+ A V+ ++W I ++ Sbjct: 166 WFTWWLASTLAHLIFTPVILLGKDFFSRKIPYHVIEMLLILA-VFISVSWSIFIQSYPVA 224 Query: 96 SREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLM----IMCLNLMGAGGPRLFVAGLVLMV 151 + L G +V + V+++ A+ + L LF+ M Sbjct: 225 YLLLLILNWTVFRYGAFVSSLLVSIVSILAIYTTAHGLGVFVLESQNQSLLFLQS--FMG 282 Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMST 211 V L +L L+ + + A +L L ++ L + + LQ + Sbjct: 283 VFALSSLLLSAVVEERSRAQTSLKKALDNSTKLILERTKELRRSEALLRQTNQELQKLVH 342 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 DG+T + NRR + L E+ R + L++ D+D+FK ND++GH GDE ++ + Sbjct: 343 LDGLTQIANRRCFNQRLTAEWHRLYREQKPLALILFDVDYFKRYNDSYGHQQGDECLIQI 402 Query: 272 TRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT----PQ 326 + ++ L R +D++ R+GG+EF V++ T E A R+ + L++ + + Sbjct: 403 AQAVKHLLKRPADLVARYGGEEFVVVLPNTTQEGATIVAKRIRRTVLELQIAHNATEINE 462 Query: 327 VTLRISVG-VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + +S+G V+ + ++K AD ALY AK+ GRNR VA Sbjct: 463 AIVTVSLGVVSGIPQSQEKPLTFVKKADQALYLAKQQGRNRIVVA 507 >UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VK28_9CYAN Length = 331 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 5/176 (2%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 KL E + LQ + DG+T + NRR ++ L+ E+ R +L++ DID FK+ ND Sbjct: 150 KLEEMNQELQRLVDLDGLTQIANRRAFDQALQQEWKRLAREQAPLSLILCDIDFFKAYND 209 Query: 258 TWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 T+GH GDE + + L+ R +DV+ R+GG+EF VI+ T A+ + L Sbjct: 210 TYGHQAGDECLKQVADILRKAAKRPADVVARYGGEEFVVILPNTSLRGAMQVAESIRSKL 269 Query: 317 NTLRLPNTPQVT---LRISVGVA-PLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + + + +S GVA + P + + AD ALYKAK GR+R Sbjct: 270 KSRAIVHEGSGVSKFVTLSCGVAGVIPPPKTTPDRLIAEADQALYKAKVEGRDRVV 325 >UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTU0_9FIRM Length = 491 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 100/189 (52%), Gaps = 5/189 (2%) Query: 187 LFGWVSYQTATKLAEHKR--RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 L ++ Q + +A R+++ + DG+TG+YN R+++T+ EF R+ R +L Sbjct: 296 LLRSLASQISMTIAHANHVSRVELQAITDGLTGLYNYRYFQTLFEREFKRAVRYKRPLSL 355 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 L+IDID+FK NDT+GH GD I + + ++ R D++ R+GG+EFAV+ T + Sbjct: 356 LMIDIDYFKLYNDTYGHRQGDHIIRTIAKIIRQNCRDVDIVVRYGGEEFAVLFPETTVDE 415 Query: 305 AITAMLRVHEGLNTLRLPN---TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKK 361 A R+ + N P L +S+GVA E + AD+ALY+AK+ Sbjct: 416 AFKIAERIRMAVAEYPFANKHSQPGGILTVSMGVAGYPYDAQSETELIDHADMALYRAKR 475 Query: 362 AGRNRTEVA 370 +NR + Sbjct: 476 TSKNRVCLY 484 >UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VQQ9_PSEU5 Length = 466 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 3/232 (1%) Query: 140 PRLFVAGLVLMVVSC--LVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTAT 197 RL G+V++V+ + L+L ++ + L +Q+ Sbjct: 234 RRLIDQGVVVVVLLWPTDFMAAFQERKTLLTVSAGVISLALSVVALLIFLLSSRYFQSIA 293 Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L +L ++ D +TGV +RR + L E RRHN +LL++DIDHFK +ND Sbjct: 294 RLRLAHGQLAQLANTDVLTGVSSRRAFLAGLEAELARARRHNESLSLLMLDIDHFKRVND 353 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 GH +GD + + LR D++GR GG+EFA+++ T AE A ++ + Sbjct: 354 VHGHPIGDAVLKQFSETCAGMLRAHDLLGRLGGEEFAIVLPHTDAEGARCVAEKIRTAVA 413 Query: 318 TLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 +P +T+ +S+G+A + + + AD ALY+AK+ GRN+ Sbjct: 414 QTPMPTAAGDITVTVSIGLAQMEGLPGEVDQLMARADQALYEAKRGGRNQVR 465 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 67/175 (38%), Positives = 100/175 (57%), Gaps = 4/175 (2%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 L + ++LQ +S D +T +YNR HWE L+ E+ RH LL++DIDHFKSIND Sbjct: 143 ALQKANQQLQHLSRTDHLTQLYNRGHWEQRLQFEYS---RHGSSIALLMLDIDHFKSIND 199 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 GH GD I ++ + +R SDV GR+GG+EFA+++ T A T R+ + + Sbjct: 200 RHGHQAGDAVIKRVSELIHQHVRDSDVAGRYGGEEFAILLPHTDLAGARTLAERLRQSVE 259 Query: 318 TLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + + Q + IS+G+A L+ +R ++ AD ALY +K+AGRNR A Sbjct: 260 EQEVIHNGQAIAFTISLGIACLDRPARDHRCLIEWADQALYASKRAGRNRVSTYA 314 >UniRef50_Q48MB2 GGDEF domain protein n=14 Tax=Pseudomonas RepID=Q48MB2_PSE14 Length = 509 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 3/233 (1%) Query: 139 GPRLFVAGLVLMV-VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTAT 197 RL+ V + + ++ + + + ++ + L W+ + Sbjct: 264 ARRLYTFSRVGNLPLVVVIGQSEDEVYAVWRRNAWLVGSATSVLCLGILWLTWLLCRELR 323 Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 + + L ++ DG+TG+ NRR + + E+ +R + +LL+ID+DHFK+ N+ Sbjct: 324 RRHRAEDALASLAATDGLTGLDNRRQLDEAMETEWARAQRSGKQLSLLMIDVDHFKAFNE 383 Query: 258 TWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 GH GDEA+ + + + + R D + R+GG+EF V++ T A+ ++ + Sbjct: 384 RHGHQGGDEALRLIAQTISFNIRRPGDRVARYGGEEFVVVLPETELPGAMMIAEKIRKAA 443 Query: 317 NTLRLPNTPQVTLRISVG-VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 +L L Q + +S+G V+ + Q + AD ALY+AK GRNR E Sbjct: 444 ESLPLFPDAQQPITVSIGVVSEMVRQGDKLEAFFGIADKALYQAKHKGRNRVE 496 >UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae RepID=Q2SUR3_BURTA Length = 628 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 27/343 (7%) Query: 33 SGLRFARRVRLPRAVGLAGMFLPIASTLV-SHPPPGWWWLVLVGWAFV--WPHLAWQIAS 89 R LP G + + +A+ W + G A + ++A +A Sbjct: 308 PERRTLLSTWLPWIAGFVLVCVAVAAIAYSPIAGHLWTRASMEGGAMIVSLVNVALLLAR 367 Query: 90 RAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVL 149 R PL + + VM L S A ++ N M +F AG + Sbjct: 368 RIRTPL------------MLVYGISVMSFA-LSSIAFILGKPWNHMWWLAHAIFAAGFFM 414 Query: 150 MVVSCLVTLELTG-ITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQV 208 + + L T ++ L L+ + L +L ++L+ Sbjct: 415 LSFGVVQALITTRSFATVYSQQDLMARLAESMARTEGAL---------QELKRTNQKLEH 465 Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 ++T D +TG NRR + ++ E +R +LL +D+D+FK+IND +GH VGD + Sbjct: 466 LATTDPLTGASNRRKFIEQMQAEIARAKRDGTAFSLLALDLDNFKTINDNYGHQVGDVVL 525 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQV 327 RQ +R D I R GG+EF V++ A++A RV + + Sbjct: 526 RNFVRQCLAAIRPYDHIARVGGEEFMVLLPRMLADTASGIAERVRTTIANASFGIDGTHT 585 Query: 328 TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + +S+GV+ E L +AD LY+AK GRNR + Sbjct: 586 PVTVSIGVSQYGRDGDTVDEILSAADKLLYRAKNEGRNRVVAS 628 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 70/181 (38%), Positives = 101/181 (55%), Gaps = 1/181 (0%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 T+ + L+ ++T D +TG++NRRH+ M R E D RRH R L++DI Sbjct: 397 IGVMLDITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLDI 456 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 DHFK INDT GH VGD AI AL +R DV+GR GG+EFA++++ T + A+ Sbjct: 457 DHFKRINDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALLVA 516 Query: 310 LRVHEGLNTLRLPNT-PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 R+ + + +R+P V S+GVA + L AD+ALY AK++GRN+ Sbjct: 517 ERLRQAVAAIRIPAELGTVAFTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRNKVA 576 Query: 369 V 369 V Sbjct: 577 V 577 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 4/221 (1%) Query: 150 MVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVM 209 + + +V + + +T + + L + ++ + L + + E ++ + Sbjct: 277 LPLIVVVGVGMDAVTAPWQAQWLAGAATSVVLCLLILGAAVALRREMLRRFEIEQEFLRL 336 Query: 210 STRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIV 269 S D +TG+ NRRH++ + E+ R +L++DIDHFK +ND GH GD + Sbjct: 337 SQTDSLTGLPNRRHFDEFGQREWQRAARQRSSIAVLMVDIDHFKQVNDRIGHPGGDRVLR 396 Query: 270 ALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT 328 ++ ++ +L R D GR+GG+EFA+I+ T A +A R+ + Sbjct: 397 EVSDIIRASLHRPGDFAGRYGGEEFAIILPETDAPAAAHVAERIRAAIEANTAEGVAP-- 454 Query: 329 LRISVGVAP-LNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + +S+G+A L E + +AD ALY+AK+ GRNR Sbjct: 455 VTVSIGLAAGLAAPKGTLAEMMIAADHALYRAKETGRNRVV 495 >UniRef50_B7VQN9 GGDEF family protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VQN9_VIBSL Length = 405 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 75/353 (21%), Positives = 137/353 (38%), Gaps = 26/353 (7%) Query: 40 RVRLPRAVGLAGMFLPIASTLVSHPPPGWWWL------VLVGWAFVWPHLAWQIASRAVD 93 R+ R+ A L + +L+S WL + + F + ++ Sbjct: 34 RILGMRSFFCAIFLLMVGFSLLSFGSHISPWLSKITSNMAIAGGFASMVFSLTQLRQSPS 93 Query: 94 PLSREIYNLKTDAVLAGMWVGVMGVN----------------VLPSTAMLMIMCLNLMGA 137 S ++ ++ ++ + + V + ++ A Sbjct: 94 LYSVCVFLGLPVVIVTLIYFTLYDASTNARVITMSFYITLCTVASVLVIKTGTVADVKAA 153 Query: 138 GGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTAT 197 L ++ + LV + +T + + + +I +L + + Sbjct: 154 --LVLLMSVFSAHSIFMLVRIWITLKEPNIDDFLQASSIHQLAFIITAILLSTIGFTYNW 211 Query: 198 KL-AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 L A + L S +D +T +YNRR MLR E+ RHN +++I+DIDHFK +N Sbjct: 212 LLNARLMQSLYSSSMKDSLTQLYNRRAMNEMLRREWMRSVRHNHPLSVIILDIDHFKQVN 271 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 D GH GD+ + + LQ LR +D+ R+GG+EF +++ T A ++ + Sbjct: 272 DQHGHQTGDQVLKKIGIILQHNLRAADIPFRYGGEEFLIVLPDTRIGEACKVAEKLRIII 331 Query: 317 NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + L S G++ L + +K AD ALY AK+ GRN Sbjct: 332 EETKFWRQQSANLTASFGLSELWAEDKVP-SMIKRADEALYYAKENGRNTVCA 383 >UniRef50_A4BIU7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BIU7_9GAMM Length = 318 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 69/170 (40%), Positives = 108/170 (63%), Gaps = 1/170 (0%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L RL +S DG+T +YNR +WE ML NEF +RH D +L++ DIDHFK +ND Sbjct: 144 ELKAANDRLAQLSRTDGLTQLYNRAYWEEMLSNEFKRQKRHAHDLSLIMFDIDHFKKVND 203 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 T+GH VGD+ I A+ +++ R +D+ GR+GG+EFA+++ + AE+A+ R+ + + Sbjct: 204 TYGHQVGDDVIRAVAEEVRHNSRNTDIAGRYGGEEFALLLIDSDAENALLFAERLRKAIE 263 Query: 318 TLRLPN-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R+ ++ + +S+GVAP HY W+++AD ALY +K GRNR Sbjct: 264 NRRVSTPEGELQVTVSLGVAPWKESFHHYNAWIEAADKALYTSKDEGRNR 313 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 4/188 (2%) Query: 187 LFGWVSYQTATKLA--EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 L V A LA + + + + S RD +TG++NRR+ E L E RR++ + Sbjct: 1061 LARTVVEHLAIALANVKLQEKFKAQSMRDALTGLFNRRYLEESLEQEIHRARRNHYSVGI 1120 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 ++IDIDHFK ND +GHD GDE + + R LQ ++R SD+ R+GG+E +I+ Sbjct: 1121 VMIDIDHFKRFNDQFGHDAGDEVLKTVARLLQGSIRSSDIACRYGGEELTLILPEASLSD 1180 Query: 305 AITAMLRVHEGLNTLRLPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 ++ + L+L Q ++ S GVA L+ AD ALY+AK Sbjct: 1181 TQARSEQIRYMIEHLQLHYENQSLGSITASFGVACFPEHGETLEAVLRIADTALYQAKAL 1240 Query: 363 GRNRTEVA 370 GRNR A Sbjct: 1241 GRNRVVCA 1248 >UniRef50_B9ZRW3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW3_9GAMM Length = 791 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%) Query: 186 LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 + + + T+ E + L+ + D +T NR ++ET+L E +R+ +LL Sbjct: 608 IEYYIAMFHDITRQKELEAALEHQAFYDPLTDAANRGYFETLLDQEARRAQRYAHPCSLL 667 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA 305 ++DIDHFK INDT+GH+VGDE + L L+ LR +DV+GR+GG+EF V++ GT AE Sbjct: 668 LLDIDHFKRINDTFGHEVGDEVLRFLVHALKGRLREADVLGRWGGEEFVVLLPGTDAERG 727 Query: 306 ITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 ++ E + P + IS+GVA P R+W+K AD A+Y AKK GRN Sbjct: 728 QHVAEQLREQVTATAFPCVGL--VTISLGVAECRP-GESIRDWVKRADEAMYVAKKGGRN 784 Query: 366 RTE 368 R Sbjct: 785 RVV 787 >UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H488_METFK Length = 469 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 137/332 (41%), Gaps = 31/332 (9%) Query: 66 PGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAV----LAGMWVGVMGVNVL 121 +W F+ +A++ A+ + L+R I T L G+ V ++ +N Sbjct: 116 GAYWQFGFC--GFIIIAMAFRKATESFPQLNRIILGKNTVPFMLTPLLGIIVYMLALNAG 173 Query: 122 PSTAMLMIMCLNLMGAGGPRLFVAGLVLMVV------------SCLVTLELTGI------ 163 + +M + G ++ V+ L L+ + Sbjct: 174 NLFSAIMSSSPIVTAPLGWGSWIMAAATFVLVRAFCSDDKLVTIFLSIAALSHLCHVSHL 233 Query: 164 -TVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQT---ATKLAEHKRRLQVMSTRDGMTGVY 219 + + + L + + L + Q LA+ L + +D +TG+Y Sbjct: 234 LIDNTPFSANWYMAHLLSLFSFTTLLAVLILQLSQFTRDLADSHAYLMEKAHKDSLTGIY 293 Query: 220 NRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL 279 NR +++ E+ +R+ +LL++DIDHFK ND +GH GD+ + + + L + Sbjct: 294 NRGYFDETAELEWRRAQRNGTPISLLMLDIDHFKGYNDQFGHVKGDKCLKKIAQALHANM 353 Query: 280 -RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPL 338 R D + RFGG+EF V++ T AE ++H + L++ + +S+G A Sbjct: 354 QRPGDFVARFGGEEFVVLLPATTAEGCHAMAQKLHLAVQKLKISAGDHRRVSVSIGHATW 413 Query: 339 --NPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + E L ADLALY AK+ GRNR Sbjct: 414 NGPYENGSINELLSQADLALYTAKRLGRNRIV 445 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 1/223 (0%) Query: 148 VLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQ 207 +M + +T I + + ++ I + + +++++ L ++ L+ Sbjct: 199 SVMGALSVTIPVVTLIRETDTDKLMIVAATIGTIGLLLGITYFLTWRLVLNLDMAQKHLK 258 Query: 208 VMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEA 267 +++ D +TG+ NRR L E+ R L+++D+DHFK INDT+GH GD Sbjct: 259 RLASTDELTGLKNRRQIMKRLDEEYQRAIRLGEPLCLIMLDLDHFKKINDTYGHPFGDLV 318 Query: 268 IVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQ 326 + + ++ LR DV+GR GG+EF ++ GT E A+ R+ + ++ + Sbjct: 319 LKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGTTREEAVVLAQRLRSTVEMEKIAYEDKK 378 Query: 327 VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 VT+ +S GVA L + LK AD ALY AK+ GRNR Sbjct: 379 VTITVSCGVAFLYKGDDNVEILLKRADSALYIAKQEGRNRVVA 421 >UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P7Y3_AZOSE Length = 313 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 2/187 (1%) Query: 187 LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 L + T+ + L+ ++T D +TG+ NRR + + E R TL++ Sbjct: 125 LSFIGIIRDITERKRLEAELRQLATTDPLTGILNRRRFTELTTQEIHRAHRLRHPLTLIM 184 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAI 306 +DID FK IND +GH VGD I +L LR D++GR GG+EFAV++ A ++ Sbjct: 185 LDIDWFKRINDAFGHTVGDRVIQSLASACASELREIDILGRLGGEEFAVVLPELGASGSL 244 Query: 307 TAMLRVHEGLNTLRLP--NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 R+ + + L++ + V S+GVA L L AD ALY+AK+ GR Sbjct: 245 EVAERLRQKVEGLQITLNDGRIVRFTCSLGVAVLKDTDQSPDTLLVRADNALYRAKRDGR 304 Query: 365 NRTEVAA 371 N A+ Sbjct: 305 NCVRAAS 311 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 2/218 (0%) Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMST 211 + V++ + L ++ ++ ++ + +++LQ +T Sbjct: 254 MIAAVSINEDNFFADWRRHSLLMGGFGLVVGAILFTLSILTVRSQQEQFRIQQQLQQQAT 313 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 D +TG+ NRR+ E +R +++++DIDHFK +NDT+GH VGD+ ++ + Sbjct: 314 TDPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMMDIDHFKKVNDTYGHHVGDQVLMEV 373 Query: 272 TRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQVTLR 330 + + R SD++ RFGG+EF +++ T A T ++ + + L P V++ Sbjct: 374 AQTCRSHCRESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQAIEDLSFPTAEGNVSVT 433 Query: 331 ISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 S GV+ + + AD ALY+AK GRN Sbjct: 434 ASFGVSQWQGETK-IDRVVSRADAALYQAKHDGRNCVR 470 >UniRef50_C4XKN6 Putative signaling protein n=2 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKN6_DESMR Length = 629 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 87/336 (25%), Positives = 152/336 (45%), Gaps = 26/336 (7%) Query: 61 VSHPPPGWWWLV-------LVGWAFVWPH----------LAWQIASRAVDPLSREIYNLK 103 +++P W + L+ W + +A + + + +R ++ + Sbjct: 280 LTNPYHVLQWALKLTGFALLIFGIIFWKNRNLKREVEEKVAARELLKQANNYNRSLFEIN 339 Query: 104 TDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFV------AGLVLMVV-SCLV 156 TD ++A GV+ + + + L+G LF GL ++ S + Sbjct: 340 TDPIMAIDREGVITDANKSTETITGLSRTELIGRKFSSLFTNDQKADQGLQDTLLYSSIK 399 Query: 157 TLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMT 216 EL ++ + + S+ + + + T+ + RL+ M+T D +T Sbjct: 400 NHELEFTNINGKNTHAIFNFSVFKDETGISTGIFAAARDITERKIMEERLKEMATTDSLT 459 Query: 217 GVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ 276 G+ NR+H+ F+ +RH + ++ + DIDHFK +NDTWGH+ GD + L++ Sbjct: 460 GLNNRQHFLEHSSILFEMAKRHKANLSIALFDIDHFKQVNDTWGHEAGDLVLRELSKLAL 519 Query: 277 ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGV 335 R SD+IGR GG+EFAVIM T E AI A R + + + R +++ +S+G+ Sbjct: 520 NCFRSSDIIGRIGGEEFAVIMPETDKEEAILASERFRKIVESTRFEYENDLLSITVSIGI 579 Query: 336 APLNPQM-SHYREWLKSADLALYKAKKAGRNRTEVA 370 A NP + + K +D ALY AK GRN A Sbjct: 580 AQFNPNTNTTINDLTKISDDALYTAKANGRNMVFCA 615 >UniRef50_Q0A5N6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5N6_ALHEH Length = 419 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 7/214 (3%) Query: 160 LTGITVSFNSAPLEWWLSLPIIVI----YPLLFGWVSYQTATKLAEHKRRLQVMSTRDGM 215 G ++ N + ++L I + ++ + + T+ + L+ +T D + Sbjct: 206 FRGTFLNRNRSGALFYLEQSITPVRADQGQVVRYVATGKDITERVRMEEELKRAATTDAL 265 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQL 275 TG+ NR +E +L +++ CRR+ +LL+ D+DHFK++ND GH+ GD + AL + Sbjct: 266 TGLANRLSFEQLLERDYERCRRYGGALSLLMFDLDHFKAVNDAHGHEAGDAVLQALAGLV 325 Query: 276 QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGV 335 +R +D + R+GG+EF V++ TP +A ++ E + R P+ + S GV Sbjct: 326 LANVRTADTVARWGGEEFMVLLPETPLAAAGELAEKLRERVAAHRFPHGAP--VTASFGV 383 Query: 336 APLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 L R ++ AD ALY+AK GR+R E Sbjct: 384 CALR-DDDTCRTLVRRADEALYRAKHLGRDRVEC 416 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 1/176 (0%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 ++ + LQ ++ RD +TG+YNRR+ + L E RR +L+++DIDHFK Sbjct: 460 RIEEIGRLQVALQELAVRDSLTGLYNRRYLDETLEREVSRARREGIPLSLVMLDIDHFKQ 519 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 +NDT+GH VGDE + L L +R DV R+GG+EF +++ P E+ + Sbjct: 520 VNDTYGHQVGDEVLRILASTLSADIRAEDVACRYGGEEFLILLPNMPLETTMLRAQGWRS 579 Query: 315 GLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + L + + Q+T IS+GVA + + AD ALY+AK GRN+ V Sbjct: 580 AVEALSVKHGNFQITFTISLGVAAYPEHGKTPDDLTRCADQALYRAKNEGRNQVSV 635 >UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVJ7_DESOH Length = 410 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 78/353 (22%), Positives = 138/353 (39%), Gaps = 24/353 (6%) Query: 41 VRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIY 100 +F A + P + +A P + +A + R I Sbjct: 53 TYRVLFWFAVFLFNLFAISDYVLTPDIYPVAWFFRFALATPVMIAAMALASRQRFRRYII 112 Query: 101 NLKTDAVLAGMWVGVMGVNVL---------PSTAMLMIMCLNLMGAGGPRLFVAGLVLMV 151 +L T G ++ + A++++ ++ L + Sbjct: 113 HLLTLLFFMGGASLLLLAVLSSAPNAGHSYTGVALVILFAAIVIRIPFWHAVALCGGLFL 172 Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQ----------TATKLAE 201 + L+ T + L + I ++ + A +L Sbjct: 173 LHLLIFPWFQMPTDLIVHSALVVFSVAVISLLGNYRIEREFRRAYLRALKMKIDARQLEG 232 Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 R+L+ M+ D +TG++NRRH++ L E+ + R +L+ IDIDHFK ND GH Sbjct: 233 LNRQLEEMAVSDPLTGLFNRRHFDAHLDAEWRSAVREQLSISLIFIDIDHFKLYNDNHGH 292 Query: 262 DVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 GD + + L + R D R+GG+EF V+++ T + A+ ++ L L Sbjct: 293 QAGDLCLKQIADTLTENVHRPGDACVRYGGEEFVVLLANTNMDQALYVAQKIQSHLQALA 352 Query: 321 LPNTPQ---VTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTEV 369 +P+ + +S+GVA + P + L+ AD +LY+AK AGRNR V Sbjct: 353 IPHGYSPVAGEVTVSMGVASMVPDRDDTPEDLLEKADKSLYRAKDAGRNRICV 405 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 12/194 (6%) Query: 177 SLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCR 236 S+ I+ ++ +LF + + + + M+T D +TG++NR ++ + E Sbjct: 304 SILILFLFTILFYFAISRI---------KFEEMATVDKLTGLFNRHKFQEIAEIEIKRSH 354 Query: 237 RHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVI 296 RH R ++++ DIDHFK INDT+GHD+GD + L + ++ +R D R+GG+EF ++ Sbjct: 355 RHKRPLSVILFDIDHFKKINDTYGHDIGDVVLRELAKIIKQNIRKYDYAIRWGGEEFLIL 414 Query: 297 MSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLAL 356 T + A ++ + + + P + IS+GVA ++P + +K AD AL Sbjct: 415 TPETDEKQAFAMAEKLRKAVESHTFPEVG--KVTISLGVASVDPN-ESIDQAIKKADNAL 471 Query: 357 YKAKKAGRNRTEVA 370 Y +K GRN+T VA Sbjct: 472 YGSKLGGRNKTTVA 485 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 3/191 (1%) Query: 184 YPLLFGWVSYQTATKL--AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 + +L V+ Q K L+ S DG+TG+YNRR+W+ C R + Sbjct: 134 FCMLVYDVTEQALGKRGMEHLNEELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRREKP 193 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 +T L++DIDHFK INDT+GH GD+ I L ++ +R +D+ GR+GG+EFA+I++ + Sbjct: 194 STALMLDIDHFKRINDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSS 253 Query: 302 AESAITAMLRVHEGLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 E A R+ + L + + ++ +S+G+A +P WL+ AD ALY+AK Sbjct: 254 VEDAKIVAERIRQLAQRLVVEHEGESISFTVSLGLAQFSPDFKGAMAWLECADQALYEAK 313 Query: 361 KAGRNRTEVAA 371 + GRN+ + A Sbjct: 314 ENGRNQYRIYA 324 >UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VVS2_9CYAN Length = 314 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 100/177 (56%), Gaps = 1/177 (0%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + + + L+ ++ D +TG++NRRH+ T+ EF+ R+ R ++L+IDIDHFK Sbjct: 137 RLVKEHEKLANLLRKLAITDPLTGLWNRRHFLTVAYQEFNRASRYKRFMSILMIDIDHFK 196 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 IND +GH +GDE + + + + +LR +D GRFGG+EF ++ T + A+ R+ Sbjct: 197 QINDEYGHTMGDEVLKGVAKSIVGSLREADYCGRFGGEEFVTLLPETDSSGAVRVAERLR 256 Query: 314 EGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + + + QV + ++VGVA ++ ++ A+ ALY AK G NR + Sbjct: 257 KRMEQITIGIGDKQVQMTVTVGVASYQLDDANIEVIIQRANKALYHAKSQGYNRVAL 313 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 2/176 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 +L E L+ + T DG+TG+ NRRH++ EF RR+ R ++ + DID FK Sbjct: 432 LLERLREQAETLERLVTYDGLTGLANRRHFDEQFEYEFRRTRRYKRPLSIAMSDIDFFKK 491 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 +ND + H VGDE + + + +R D++ R+GG+EF I + T ESAI A ++ + Sbjct: 492 VNDNFSHQVGDEVLKKVASIFRENVRAGDLVARYGGEEFVFIFTETNKESAIRAAEKIRK 551 Query: 315 GLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + N + + IS+GVA + E + +AD LY+AK+ GRN+ Sbjct: 552 AIEDYDWSNVHAGLKVTISIGVAE-DAGFDGCDELIAAADSKLYEAKRNGRNQVRA 606 >UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammaproteobacteria RepID=B3PIC1_CELJU Length = 322 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 107/176 (60%), Gaps = 1/176 (0%) Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 ++LQ +S D +T ++NR +WE L EF R+ ++L+++DIDHFK IN Sbjct: 146 IAQQHANKQLQNLSRTDHLTSLFNRGYWELRLIQEFKRYDRYESPSSLIMLDIDHFKKIN 205 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 D +GH VGDEAI ++R ++ +R D+ GR+GG+EF +I++ T + A R+ + Sbjct: 206 DNYGHTVGDEAIRCVSRVIKEQVRDLDIAGRYGGEEFGIILTSTNGDGACVIAERLRSII 265 Query: 317 NTLRL-PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + ++ IS+GVA LN M +R+W++ AD ALYK+K++GRNR ++A Sbjct: 266 EKQTVYAEGHEIHFTISLGVAELNDHMHDHRQWIEKADHALYKSKESGRNRCTLSA 321 >UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZ07_SHESH Length = 298 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 147/276 (53%), Gaps = 18/276 (6%) Query: 112 WVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGL--VLMVVSCLVTLELTGITVSFNS 169 + V+G ++ S A+L+ M + + +L GL + L+ + + G + Sbjct: 4 ILPVLGSGLVISGALLLAMAIAPVWKIVRQLPTGGLRYSWGFLILLILIFIAGYVIYAKF 63 Query: 170 APLEWW----LSLPIIVIYPLLFGWV----SYQTATKLAEHKRRLQVMSTRDGMTGVYNR 221 +P+++ L +PII +F +V S +T + + L+ + D + G++NR Sbjct: 64 SPVQFSQLFDLVVPIIFFGGAIFVFVVCSLSLRTTRDIMQ-NYALKQENITDSLMGIFNR 122 Query: 222 RHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG 281 R+ + L++E + +++ ++ +IDIDHFK +ND +GH VGD + + + ++ +LR Sbjct: 123 RYLDRRLKDETERALNYSQPLSIFLIDIDHFKQVNDNYGHQVGDLVLKNIAQLIKHSLRE 182 Query: 282 SDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-------NTPQVTLRISVG 334 SDV+ RFGG+EF VI+ T ++ T R+ + +L ++ +++ +S+G Sbjct: 183 SDVLARFGGEEFVVILPRTKDSTSYTLAERLRHVVEDFQLTLPEESDKDSLSISVTVSIG 242 Query: 335 VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 VA LN Q + +++AD ALY+AK+ GRN+ + Sbjct: 243 VAGLNAQCKDCQCLIENADRALYQAKRNGRNQVITS 278 >UniRef50_B0C2A7 Diguanylate cyclase (GGDEF domain), putative n=4 Tax=Cyanobacteria RepID=B0C2A7_ACAM1 Length = 368 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 95/183 (51%), Gaps = 7/183 (3%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 Q +L E +RL +++ D +T + NRR + L E+ R L++IDID+FK Sbjct: 169 QLHKQLEEANKRLTYLASVDELTQLPNRRAFTEALNREWRRMAREKSSLALIMIDIDYFK 228 Query: 254 SINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRV 312 NDT+GH VGD + + R + + R +D+ R+GG+EFAVI+ T AI + Sbjct: 229 VYNDTYGHPVGDSCLFQVARVIHTCVRRPADLPSRYGGEEFAVILPNTTLSGAIHVAENM 288 Query: 313 HEGLNTLRLPNTPQVT---LRISVGVAPLNPQMSHYRE---WLKSADLALYKAKKAGRNR 366 + L +P+ + +S+GVA + P + L +AD ALYKAK GRNR Sbjct: 289 RLSVQRLMIPHKNSANGPYVSLSLGVASVIPDIQEMESETPLLLAADQALYKAKAEGRNR 348 Query: 367 TEV 369 V Sbjct: 349 VCV 351 >UniRef50_B7K7K5 Diguanylate cyclase n=2 Tax=Cyanobacteria RepID=B7K7K5_CYAP7 Length = 648 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 11/187 (5%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 KL L+ + + D +T + NRR++ +L E+ R +L++ D+D FK+ Sbjct: 450 IEKLQHENEILKQLCSTDELTHLANRRYFNEVLDKEWRRLARTFGPLSLILCDVDFFKAY 509 Query: 256 NDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 NDT+GH GD + + + + R D++ R+GG+EFA+I+ T + A+ ++ Sbjct: 510 NDTYGHLAGDFCLQEIAKTIYHCTYRPCDLVARYGGEEFAIILPETDSAGAMIVAEKIRL 569 Query: 315 GLNTLRLPNTP---------QVTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGR 364 + L + Q L +S+GVA P +K+AD ALY++K+ GR Sbjct: 570 SVKELAISQGKISPKIDLNEQNILTVSLGVACTIPNRRIDINLLIKAADNALYESKQNGR 629 Query: 365 NRTEVAA 371 +R V++ Sbjct: 630 DRVTVSS 636 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 15/290 (5%) Query: 95 LSREIYNLKTDAVLAGMW----VGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVL- 149 L I + + G+ + + L ++ + + G +L L+ Sbjct: 271 LLNSIIFVSLANFIYGLIDFNSALEIMSSSLTYALIVFMWISIRICKKGDKLIKIFLIAH 330 Query: 150 -MVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQ------TATKLAEH 202 + + V L + ++ + S+ +I+ LL VSY+ + Sbjct: 331 TLYLIFSVYALLYYLGIADANYISSHGTSIGLIIEAMLLSYLVSYKFIIMEQEKEEEKLK 390 Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + L+++++ D MT +YNRR++ + +R + ++L+IDID FK +NDT+GH Sbjct: 391 QIELKLLASTDSMTKLYNRRYFTEISAKVLHLSKREKNNLSILMIDIDRFKVVNDTYGHQ 450 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL- 321 GDE ++AL+R L R SD++ R+GG+EF +++ T + A ++ + +L + Sbjct: 451 FGDEVLIALSRLLVEHQRKSDIVCRYGGEEFVILLPNTSLKDATNIAQKIRILVESLTME 510 Query: 322 -PNTPQVTLRISVGVAPLN-PQMSHYREWLKSADLALYKAKKAGRNRTEV 369 P + IS+GVA ++ + LK AD ALY+AK +GRNR Sbjct: 511 APTNKEFKFTISIGVAQIDVEHEDDIKFALKRADDALYRAKNSGRNRVCA 560 >UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=B8KJJ5_9GAMM Length = 540 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 6/281 (2%) Query: 91 AVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLM 150 L R N + + ++ V V T + L + A RL + Sbjct: 249 LQTSLQRNRRNFYVWEFSVTVLILLLSVPVFLWTLSSVTSPLKNLAAIFRRLAAGSEESV 308 Query: 151 VVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWV---SYQTATKLAEHKRRLQ 207 V + + E+ + + + E ++ Y L + Q +L L Sbjct: 309 VDAAVTKDEIGDLFNAAEAFRRENIRERELLADYRELSRTLEAKVTQRTRELEAKNEELD 368 Query: 208 VMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEA 267 +++ D +T +NRR + L E + R+ R ++L++DID FK +ND +GH GD+ Sbjct: 369 HLASVDKLTDTFNRRALDKALLAELERADRYQRPLSILLMDIDLFKQVNDEYGHLTGDKV 428 Query: 268 IVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV 327 +V L++ ++ LR SD++GR+GG+EF VI T E A +V + + Sbjct: 429 LVTLSQTIRENLRASDILGRWGGEEFLVICPETDLEQARNVAEKVRQAIEGTDFELGK-- 486 Query: 328 TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 T+ IS+G++ L + + + AD ALY+AK GRNR Sbjct: 487 TITISIGLSVLI-EGTSAESLVAEADKALYQAKSQGRNRVC 526 >UniRef50_Q31LE3 Diguanylate cyclase with GAF sensor n=2 Tax=Synechococcus elongatus RepID=Q31LE3_SYNE7 Length = 664 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 21/242 (8%) Query: 144 VAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLL----FGWVSYQTATKL 199 + +V L G+ + ++ W L I ++ L + +L Sbjct: 421 LQLRASLVAPIFAQEILWGLLIVGQNSQPRRWEKLEIDLLKQLATQVGIAIQQARLYAQL 480 Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 A ++L ++ DG+TG+ NRRH++ L E+ R L++IDID FK NDT+ Sbjct: 481 AAANQQLLRLAQSDGLTGLANRRHFDQCLDIEWQRAIREQHPLGLILIDIDCFKQFNDTY 540 Query: 260 GHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 GH GD+ + A+ L + R +D++ R+GG+EF VI+ T + + + + Sbjct: 541 GHQAGDDCLKAVATALTQVIARPADLVARYGGEEFVVILPNTNEQGILQIAESMRSAVQQ 600 Query: 319 LRLPN----------TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 L++P+ + + + +AD ALY+AK+ GRNR Sbjct: 601 LKIPHRSSSVCSSVSLSLGAVT------WVPTPHKSPEALIAAADQALYQAKELGRNRVC 654 Query: 369 VA 370 +A Sbjct: 655 LA 656 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 65/175 (37%), Positives = 95/175 (54%), Gaps = 1/175 (0%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T +++ L+ +S D +TG++NRRH+ T++ EF RR + TL ++DIDHFK Sbjct: 363 DITHQQQYQEHLKRLSRTDELTGLFNRRHFITLMHKEFSRARRTHERLTLAMLDIDHFKD 422 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 +ND +GHDVGD + L R L+ +R D+ R+GG+EFA+ T A R+ Sbjct: 423 VNDKYGHDVGDHVLQHLGRILREDVRPYDIAARYGGEEFAICFPDTDLSQADHICERLRT 482 Query: 315 GLNTLRL-PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + N + +S G++ L P+ LKSAD ALY AK GRNR E Sbjct: 483 LCAASEVSRNGGTIGFTVSFGLSELRPEHEDLDGLLKSADNALYAAKANGRNRIE 537 >UniRef50_A3Y6S3 PAS:GGDEF protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6S3_9GAMM Length = 299 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%) Query: 166 SFNSAPLEWWLSLPIIVIYP----LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNR 221 +++ E+WL L I ++ + + T+ + +L+ +S D +TG+ NR Sbjct: 89 NYSKTGKEYWLDLSITPLFNDQGEVTHIVSIQRDVTEYIYTQNKLEELSRTDPLTGLINR 148 Query: 222 RHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG 281 R ++ M EF + N +LL +DID+FK IND +GH GD + + + + +R Sbjct: 149 RVFDEMAEKEFYRYQNQNIHYSLLALDIDYFKRINDKYGHLTGDYVLASFSTLCEKNIRS 208 Query: 282 SDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL-PNTPQVTLRISVGVAPLNP 340 D I R GG+EF +I+ T AI ++ ++ R + ++ + +S+GV+ + Sbjct: 209 QDKIARIGGEEFCIILPATDKVGAIEVAEKLRRAISNARFKQDEHEIAVTVSIGVSQVKM 268 Query: 341 QMSHYREWLKSADLALYKAKKAGRNRT 367 Y LK AD LY+AK GRN+ Sbjct: 269 SDYDYVAMLKRADENLYRAKHQGRNQV 295 >UniRef50_UPI0001AF38B9 GGDEF domain-containing protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF38B9 Length = 249 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 128/235 (54%) Query: 136 GAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQT 195 A GPRL G+ + L++L L V+ + + +P++VIYP++ GW+S+Q Sbjct: 1 AAAGPRLMFQGIFAQALGVLISLALLNPVVNLQGNMAQIYACVPVLVIYPIVIGWLSHQV 60 Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 KL EH+ L+ +S D +TG+ N W+ +L EF + + + +IDIDHFK + Sbjct: 61 TLKLCEHRNILRKLSRTDSLTGLLNHGAWKDLLDLEFTKSQNAYQHCVIALIDIDHFKVV 120 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH +GD + ++ L LR SD+IGR GGDEF VI+ T A + R+ Sbjct: 121 NDTYGHIMGDTVLQNISEALLDNLRDSDLIGRCGGDEFCVILPDTSLIQARETLERMRLA 180 Query: 316 LNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 ++ + + + +S+G+A +MS WL AD ALY AK GRNR A Sbjct: 181 IDKMTHSRHCDLKVSLSIGIAAYMSEMSDAASWLHEADKALYLAKSTGRNRIVSA 235 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 4/184 (2%) Query: 191 VSYQTATKLA--EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V+ Q A +A + + +L+ S RD +T ++NRR+ E L E +RH+ +L+ID Sbjct: 579 VAEQLALAIANLKLREQLEEQSLRDPLTKLFNRRYLEQRLSQELARAKRHHYSVGVLMID 638 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 +DHFK ND+ GHD GD + ++ L+ +R SDV R+GG+E +I+ E A Sbjct: 639 VDHFKRFNDSLGHDAGDRILASIGTLLKNNIRTSDVACRYGGEEITIILPDATLEEASQK 698 Query: 309 MLRVHEGLNTLRLPNTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 + + + +++ + ++ ++ S GVA +E ++ AD ALY AK+AGRNR Sbjct: 699 AEFLRQAIAEMKIEYSGKIVNSVTASFGVACYPDHGETGQEIIQIADKALYDAKQAGRNR 758 Query: 367 TEVA 370 VA Sbjct: 759 VIVA 762 >UniRef50_B7KCD2 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Cyanothece RepID=B7KCD2_CYAP7 Length = 960 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 9/232 (3%) Query: 144 VAGLVLMVVSCLVTLELTGITVSFNSAPLEWW----LSLPIIVIYPLLFGWVSYQTATKL 199 + +VV L G+ ++ + W L + L + +L Sbjct: 723 LQVRAKLVVPILQQDRTWGLLIAHHCTSPRQWQPFEAELLTQLATQLAIAIQQSELHQQL 782 Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 ++L+ ++ D +T + NRR ++ L + N R R +LL+ DID+FK NDT+ Sbjct: 783 QSTNQQLENLALIDQLTQIPNRRCFDHDLERHWQNLARQKRPLSLLLCDIDYFKQYNDTY 842 Query: 260 GHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 GH GD + + + L+ + R SD++ R+GG+EF +I+ T AI + + L Sbjct: 843 GHSGGDVCLTQVAQALKASARRASDLVARYGGEEFVIILPDTDNFGAIAVAQNIQKTLKE 902 Query: 319 LRLPNTPQV---TLRISVGVAPLNPQMSHYR-EWLKSADLALYKAKKAGRNR 366 LRLP+ + +S+G+A L P+ E + +AD ALY+AK GR+R Sbjct: 903 LRLPHRASGVSSYVTVSIGIATLIPRSDLPSIELINAADQALYQAKAQGRDR 954 >UniRef50_A0Z7X2 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7X2_9GAMM Length = 365 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 3/185 (1%) Query: 184 YPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDAT 243 Y + +L +L+ +++ D +T + NRR + +L EF+ R+ + + Sbjct: 179 YMAELEAKVEERTLELKRANEKLEYLASTDPLTELVNRRRLDEVLEQEFERTSRYQGELS 238 Query: 244 LLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAE 303 L+++DIDHFK++NDT GH VGDE I + + R SD GR+GG+EF ++ T + Sbjct: 239 LILLDIDHFKAVNDTRGHQVGDEVIAGVGNIAKQMSRKSDTAGRWGGEEFLIVAPQTSCD 298 Query: 304 SAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAG 363 +A+ ++ + + V + S GVA L + LK AD ALY+AK G Sbjct: 299 NAVAFAEKLRLSIENTEFSSG--VRVSASFGVASL-ETGETIQLVLKRADEALYRAKHNG 355 Query: 364 RNRTE 368 RNR E Sbjct: 356 RNRVE 360 >UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluorescens RepID=Q4KF29_PSEF5 Length = 523 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 11/271 (4%) Query: 107 VLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVS 166 + A + G + LP M +++ L + + Sbjct: 235 IGASLARGEIFSKYLPEATTGNAMITSIVDGVTRLYGYRQLQAYPLVVAAANSKDSVLKG 294 Query: 167 FNSAPLEWWLSLPIIVIYPLLFGWVSYQTAT-------KLAEHKRRLQVMSTRDGMTGVY 219 + ++ + + ++++ LFGWV Q L E + L+V++T D +TG+ Sbjct: 295 WYASAYQSTAIVALVLLGVGLFGWVFVQQVRNNERIEADLREAQEALEVIATHDSLTGLA 354 Query: 220 NRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL 279 NRR +E L EF R +L+++DID+FK NDT+GH GD + + + L+ Sbjct: 355 NRRLFERALTVEFGRGARQRSPLSLVMVDIDYFKRYNDTYGHVAGDHCLTEVAQALKGCC 414 Query: 280 -RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ--VTLRISVGVA 336 R +D+ R+GG+EFAV++ T A+ ++ + + ++ + +S+G Sbjct: 415 QRKADLAVRYGGEEFAVLLPDTDIHGALAMAEQIRRSVMQRNIAHSGSPVGCVTVSLGCY 474 Query: 337 PLNPQM-SHYREWLKSADLALYKAKKAGRNR 366 P +++ AD ALY+AK GRNR Sbjct: 475 AFVPTGRDSIEMFIERADAALYQAKATGRNR 505 >UniRef50_B2A6L1 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6L1_NATTJ Length = 340 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 104/191 (54%), Gaps = 14/191 (7%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 +T L E ++ + ++T D +T + NRR ++ +R E+ R+ + +++++DID+F Sbjct: 147 EKTLKLLEETNKKFEKLATIDELTQLANRRLFDETMRGEWRRANRNGYNLSIILLDIDYF 206 Query: 253 KSINDTWGHDVGDEAIVALTRQLQ-ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 K+ ND +GH GDE + A+ ++L+ + +R D R+GG+EFAVI+ T A + + Sbjct: 207 KNFNDAYGHQAGDECLKAIAKKLKFLMMRPGDFAARYGGEEFAVILPETDLRGAHSVAEK 266 Query: 312 VHEGLNTLRLPNTPQ---VTLRISVGVAPLN----------PQMSHYREWLKSADLALYK 358 + +G+ L++P+ + +S+GVA + + ++ AD ALYK Sbjct: 267 IRQGIEELKIPHCDSKVAQYVTVSLGVASADLKNCQGGRDQATDDEIKILIEHADEALYK 326 Query: 359 AKKAGRNRTEV 369 AK GRN + Sbjct: 327 AKDNGRNTIAL 337 >UniRef50_A1TWZ7 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWZ7_MARAV Length = 368 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 85/366 (23%), Positives = 136/366 (37%), Gaps = 26/366 (7%) Query: 16 AAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVG 75 + P L E RSGLR R L R +FL S LV + + Sbjct: 1 MNTSKHPDLGTALEQSRSGLRDNHRRSLTR-----LLFLVTGSALVVFS------CLQLF 49 Query: 76 WAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLM 135 + W L A L W+ V++ ++M++ + Sbjct: 50 NGYPWVALVELFA----SGLLFYGVFCLKTTAHLQQWIYAYLVSLFSFFIVIMLLPEASI 105 Query: 136 GAGGPRLFVAGLVLMVVS----------CLVTLELTGITVSFNSAPLEWWLSLPIIVIYP 185 A L + L +++ ++ + + L + + Sbjct: 106 AAFVWVLMMPVLAYLLLGKHEGMILSVPFMLVGGVVYYFFLGEVGSAHRMIDLLNMFLCG 165 Query: 186 LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 L + + E ++RL M+ D +TG+ NR ++++ L C R L+ Sbjct: 166 ALMQVFMHMYEVRREEAEQRLVDMAQTDALTGLANRSNFQSTLARTIAECERSGTGFALV 225 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA 305 I+DIDHFK +NDT GHD GD + + + L LR +D +GR GG+EF +I+ A Sbjct: 226 IMDIDHFKLVNDTLGHDAGDYVLRHIGQSLTERLRTTDFVGRLGGEEFGLILRDVKPGDA 285 Query: 306 ITAMLRVHEGLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 M + E + L + + S G+A AD LY K+AGR Sbjct: 286 FELMDELRERIARRELKYGEAGIRVTASFGIAQWPDHGREAETLFCVADRCLYSGKRAGR 345 Query: 365 NRTEVA 370 NR A Sbjct: 346 NRVAPA 351 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 3/181 (1%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 T+ + +L+ ++T D +TG NRR + E + R+ ++L+IDI Sbjct: 295 IGIVTDITERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLMIDI 354 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 DHFK +ND GH VGD+A+ A T ++ LR D GR GG+EFA ++ T A+ Sbjct: 355 DHFKQVNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGALLVA 414 Query: 310 LRVHEGLNTLRLP---NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNR 366 R+ + + + LP + P + L S+GVA P + L AD ALY+AK GRNR Sbjct: 415 ERLRQAVEAIALPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKAEGRNR 474 Query: 367 T 367 Sbjct: 475 V 475 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 2/185 (1%) Query: 187 LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 + + +R L+ ++T D +TG +NRRH+ E + R+ TLL+ Sbjct: 388 VGVIGVLTDISDRKAMERELRRLATTDSLTGAFNRRHFLAAAGTELERANRYGNPLTLLM 447 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAI 306 +D+D+FKSIND GH GD+A+ L L+ LR DVIGR GG+EFAV++ T A+ Sbjct: 448 LDVDYFKSINDAHGHGTGDDALRRLVEGLRHALRDIDVIGRLGGEEFAVLLPETGMAGAL 507 Query: 307 TAMLRVHEGLNTLR--LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 R+ + LR LP+ Q+ +S+G+A + L AD ALY+AK GR Sbjct: 508 ITAERLRAQVADLRLDLPDGGQLAFTVSIGIAAPRAEDGSVEAVLARADKALYRAKDEGR 567 Query: 365 NRTEV 369 NR Sbjct: 568 NRVCA 572 >UniRef50_Q0F307 Sensory transduction system regulatory protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F307_9PROT Length = 432 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 131/258 (50%), Gaps = 12/258 (4%) Query: 125 AMLMIMCLNLMGAGGPRL--FVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIV 182 + CL G G ++ F GL + V ++ +TV + WL + Sbjct: 175 LFIEQGCLKCHGNQGYQVGDFSGGLDVAVPMATYLKHVSDVTVLLWKSYGLIWLVGLSGI 234 Query: 183 IYPLLF--GWVSYQT--ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRH 238 +Y VS + ++L E +L+ S +DG+T V NRR ++T+L E+ RR Sbjct: 235 VYAFRHNRAIVSERLKLISELQEMNDKLERYSYQDGLTRVANRRMFDTLLDREWAAARRG 294 Query: 239 N-RDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQI-TLRGSDVIGRFGGDEFAVI 296 R L++IDID+FK NDT+GH GD+ + + L + R +D+I R+GG+EF ++ Sbjct: 295 GGRQLALVMIDIDYFKLYNDTYGHLAGDDCLKRIAAALSRVSKRTTDLIARYGGEEFVLL 354 Query: 297 MSGTPAESAITAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNPQMS-HYREWLKSA 352 + T E A + + + L++P++ + ISVGV + P + ++ A Sbjct: 355 LPNTGREQAHSLAEQCLRDIAALQIPHSQSEAAEVVTISVGVTTMAPDATMQAAMLIEMA 414 Query: 353 DLALYKAKKAGRNRTEVA 370 D ALY+AK++GRNR EVA Sbjct: 415 DRALYRAKESGRNRVEVA 432 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 1/220 (0%) Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMST 211 + + + + + + + + ++V+ + + +L R L + ++ Sbjct: 270 LLAFASFPREMVLEPWKNHAMVYGGASIVLVLVVAGLSTLLVRGQIRLNRQSRELALAAS 329 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 D +TG NRR + EF R+ + ++ID+DHFK++NDT+GH GD + + Sbjct: 330 TDMLTGALNRRAFMESASREFARVCRYGGHLSCIMIDLDHFKNVNDTYGHAAGDLVLSSS 389 Query: 272 TRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ-VTLR 330 + LR D+ R+GG+EF +++ GT A T + GL L L + + L Sbjct: 390 AHYIASRLREPDMFCRYGGEEFVILLPGTDRNGAATVAEELRAGLAGLDLQRGDEKLPLT 449 Query: 331 ISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 S GVA ++ Q + L AD ALY+AK+ GRNR +A Sbjct: 450 ASFGVAEIHAQCATLDTLLSLADQALYEAKENGRNRVCLA 489 >UniRef50_C0QEH9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QEH9_DESAH Length = 341 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 3/177 (1%) Query: 192 SYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDH 251 + +L + R L+ ++ D +TG++NRR + ML E RR+ L+++DID Sbjct: 160 VMERTRELEKKNRELEQIAIIDQLTGLFNRRKLDEMLSRELIRSRRYGNSFGLIMVDIDF 219 Query: 252 FKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 FK++NDT GH +GD+ + QL+ +R DV+GR+GG+EF +I T + I + Sbjct: 220 FKTVNDTHGHQIGDQVLQRFADQLKQGVREVDVLGRWGGEEFLIICPETIKDYLILLAEK 279 Query: 312 VHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + ++ +P + S GV + + + D ALY AK+ GRNR E Sbjct: 280 LRIAVQSIAVPGVGEK--TASFGVTVY-EKGDNLDTLVDKVDKALYLAKEKGRNRVE 333 >UniRef50_B2SWP1 Diguanylate cyclase n=5 Tax=Burkholderia RepID=B2SWP1_BURPP Length = 516 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 109/232 (46%), Gaps = 4/232 (1%) Query: 140 PRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKL 199 + + + V L I V + + + + + + Sbjct: 258 RWYAFRHIDMYPLILDVALSTRDIYVEWRHRAWIIGSLIAALDVTIIALAVLFSYQLRYR 317 Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 + L+V++ DG+TG+ NRR +E +E+ +R+ ++L+ID+D FK ND + Sbjct: 318 RAAEEELRVLARTDGLTGLNNRRTFEEHAEDEWRRAQRNAWPLSMLLIDVDSFKGFNDLY 377 Query: 260 GHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 GH GD+A+ A+ R + ++ R D R+GG+EFAV++ T A ++ + Sbjct: 378 GHSAGDDALTAVARCISQSVRRPGDTAARYGGEEFAVLLPDTDETGAAFIAEKIRAAVQA 437 Query: 319 LRLPNTPQVT--LRISVGVAPLNPQM-SHYREWLKSADLALYKAKKAGRNRT 367 L+L + L +S+G+A + + R L +AD ALY+AK AGRNR Sbjct: 438 LQLRHVASSQHVLTVSIGIATTRGEAFATSRALLNAADDALYEAKDAGRNRV 489 >UniRef50_C6CKY4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKY4_DICZE Length = 463 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 104/189 (55%), Gaps = 5/189 (2%) Query: 187 LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 + + S T+L + + LQV++ D +TG+ NRRH++ ++ + + +LL+ Sbjct: 267 IVFYGSMLDVTELKQSETLLQVLAQTDSLTGIANRRHFDERYQHLWRQQESMQKPLSLLM 326 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSD-VIGRFGGDEFAVIMSGTPAESA 305 IDID FK ND++GH GD I ++ L L S+ ++GR+GG+EF +++ T A Sbjct: 327 IDIDRFKRFNDSYGHSKGDACIKSVVETLAAQLPSSECLLGRYGGEEFIMVLPETDHRQA 386 Query: 306 ITAMLRVHEGLNTLRLPN--TPQVTLRISVGVAPLNPQ--MSHYREWLKSADLALYKAKK 361 + R + + ++ +P+ +PQ + +S+GVA P S + AD ALY+AK Sbjct: 387 LILAERCRQAVESMEIPHTKSPQGVVTVSIGVAAAKPGETGSSMTQLSNDADQALYRAKH 446 Query: 362 AGRNRTEVA 370 GRNR E + Sbjct: 447 QGRNRVEAS 455 >UniRef50_B0SEM7 GGDEF domain protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEM7_LEPBA Length = 288 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 9/281 (3%) Query: 94 PLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVS 153 P + ++ L A G + L S A+ + G F+A ++ + Sbjct: 2 PATFDLIWLTVLAFGTGHITSFFILGYLGSIALSSMSLDRNY--GIYNAFLATVLFSAMG 59 Query: 154 CLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKL----AEHKRRLQVM 209 LV E+ +S+ I I ++ Q +KL + ++L + Sbjct: 60 FLVYFEILPSVNILMPTVKPTLMSIFISSILLGGSAFIVNQIVSKLFSSLTDVNQKLLAI 119 Query: 210 STRDGMTGVYNRRHWETMLRNEFDNCRRH--NRDATLLIIDIDHFKSINDTWGHDVGDEA 267 + D +TG+ NRR + + L E +R L+ D+D FKSINDT+GH+ GD+ Sbjct: 120 AMTDPLTGISNRRSFFSNLEIELARKQRSVGPYPIAFLLFDLDLFKSINDTYGHEFGDQV 179 Query: 268 IVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL-PNTPQ 326 ++ L+ +LR D R+GG+EF V++ T + AI ++ ++L + Sbjct: 180 LIEFATVLKTSLRKQDFPARWGGEEFLVLLPNTDLDGAIVVAEKIRTSFHSLSFYAKDKR 239 Query: 327 VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + SVG++ N Q + + AD LY+AK+ GRN+ Sbjct: 240 IQCSTSVGISVCNEQGINPEVVINQADQYLYEAKRNGRNQI 280 >UniRef50_B7KB78 Diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KB78_CYAP7 Length = 547 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 103/179 (57%), Gaps = 6/179 (3%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 KL + +RL+ + D +TG+YNRR+++ L E+ R +L+++DID+FK+ Sbjct: 347 RLIKLTQENKRLRKLVYLDELTGIYNRRYFDHYLEREWRRMTREKAPLSLMLLDIDYFKN 406 Query: 255 INDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 NDT+GH +GD + + + +Q +L R +D++ R+GG+EFA+I+S + A+ + Sbjct: 407 YNDTYGHQLGDACLKKVAQAIQKSLKRSTDIVARYGGEEFAIIISQCDNKGALFLAEIIR 466 Query: 314 EGLNTLRLPNTPQVT----LRISVGVAPLNPQMSH-YREWLKSADLALYKAKKAGRNRT 367 E + +L + + + S+GVA + P + + ++ AD ALY++K GRNR Sbjct: 467 EQIKSLAINHKNSQVNLKIVTASIGVATIIPALETQPKMLIQMADEALYQSKHEGRNRV 525 >UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVG8_9CYAN Length = 329 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 10/227 (4%) Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQ---TATKLAEHKRRLQV 208 V L E + +++ P L V + T +L + + Sbjct: 84 VIFLTASEEKEHLLEAFKQGAVDYITKPFYAPELLARVRVHLELKYTKDELNKKSAAFEK 143 Query: 209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAI 268 + D +TG++NRRH ++ E+ +NR +++++DIDHFK +NDT+GH VGD+ + Sbjct: 144 QAITDPLTGIFNRRHLMSISEIEYQKAVNYNRLFSIIMLDIDHFKKVNDTYGHIVGDQVL 203 Query: 269 VALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ-- 326 +T+++Q LR DV GRFGG+EFA+I+ G + A+ R+ + + +P Sbjct: 204 KRMTQEVQNLLREGDVCGRFGGEEFAIILPGADLKIALKIAERLRQAIADFYIPIYDSNS 263 Query: 327 -----VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + IS+GV + + + AD ALY+AK GRN+ Sbjct: 264 SSNLKIKITISLGVTTYHIDDDKLDKMWRRADDALYQAKAKGRNQVC 310 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 2/185 (1%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 A +L + ++ L ++T DG+T VYNRR + L E + +R +L+++ Sbjct: 244 LAETFNLMANQLEQSQQDLYRLATLDGLTEVYNRREFNRWLLVEIERSQRGEHPVSLIMV 303 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DIDHFK +NDT+GH GD A+ + + LQ +R D++ R+GG+EF VI+ + + Sbjct: 304 DIDHFKRLNDTYGHQAGDLALCEVAQLLQREVRPGDIVCRYGGEEFGVILPKATSADSWV 363 Query: 308 AMLRVHEGLNT--LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 R+ + + LP+ + + S+GVA +K AD ALY AK GRN Sbjct: 364 IAERIRLAIAEKSVVLPSQQHIDMTASLGVATYPDHADCKERLVKQADQALYTAKYQGRN 423 Query: 366 RTEVA 370 R A Sbjct: 424 RVHSA 428 >UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacteria RepID=B0CDD6_ACAM1 Length = 630 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 5/163 (3%) Query: 210 STRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIV 269 S DG+T ++NRR ++ L E+ RR + ++++ D+DHFK NDT+GH GD + Sbjct: 466 SRIDGLTSIHNRRSFDESLDKEWRRLRREQQPLSIILCDVDHFKQYNDTYGHQAGDTCLQ 525 Query: 270 ALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN---TP 325 + + ++ R +D++ R+GG+EF V++ TP A + + LR+P+ + Sbjct: 526 EVALAIDKSVKRPADMVARYGGEEFVVLLPNTPLPGATHIAEMIRTAIEVLRIPHKTSSA 585 Query: 326 QVTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRT 367 + +S+GVA + P Y E L++AD ALY+AK+ GRNR Sbjct: 586 SDQVTLSLGVATVIPNTQQTYTELLEAADAALYRAKQQGRNRV 628 >UniRef50_C0N773 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N773_9GAMM Length = 462 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 3/213 (1%) Query: 158 LELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSY-QTATKLAEHKRRLQVMSTRDGMT 216 + + L L + +V+ + ++ Q +L ++L+ +S RD +T Sbjct: 251 WLSLSFHQNVDLTWLWRMLIVIAVVVALFFYRYLLVNQHNRELQRVNKKLEQLSQRDHLT 310 Query: 217 GVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ 276 G++NR + + + E +R+ T++++DID FK IND++GH VGD+ I + L+ Sbjct: 311 GIHNRYYLDQAFQQELTRYKRYQHGFTIVMLDIDLFKQINDSYGHVVGDDVIKQIAMLLR 370 Query: 277 ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVA 336 +R DV+ R+GG+EF ++ T + A T + + ++ + +S GV Sbjct: 371 EHVRDQDVVARWGGEEFLILNPETSLDGARTLAEHLRRLIRRTPFT-VDKIDVTVSFGVT 429 Query: 337 PLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 ++ AD ALY+AK++GR++T V Sbjct: 430 DYRA-GEDIETMIQRADSALYQAKQSGRDKTVV 461 >UniRef50_Q2BP76 GGDEF domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP76_9GAMM Length = 322 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 67/175 (38%), Positives = 109/175 (62%), Gaps = 1/175 (0%) Query: 196 ATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSI 255 +L + ++LQ +S D +TG++NR +WE L NEF+ R +TL++ DIDHFK + Sbjct: 143 QLELQQANKKLQALSREDRLTGLFNRGYWEECLNNEFERFNRSQMTSTLVMFDIDHFKRV 202 Query: 256 NDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 NDT+GH GDE I + L+ R +D++GR+GG+E+ I++GT E+A+ R+ Sbjct: 203 NDTYGHQAGDEVIRVVADTLREQARKTDILGRYGGEEYGAILTGTNGENAMIFAERLRAR 262 Query: 316 LNTLRLPNT-PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + +L +P Q+ IS+GV+ L + +EWL+ +D ALYK+K++GRN + Sbjct: 263 IESLVVPYGEHQLKFTISIGVSELTYEHDSPKEWLEQSDQALYKSKQSGRNWVTL 317 >UniRef50_Q0AV70 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AV70_SYNWW Length = 459 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 3/196 (1%) Query: 174 WWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFD 233 L + + + + +L E R LQV + D +TG+YN R L+ E Sbjct: 267 LLLMVFHDITERIRMKEELEEKNQQLRELNRILQVQAITDSLTGLYNHRQVLEKLQLEIA 326 Query: 234 NCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEF 293 R+ ++ T++++DIDHFKSIND +GH VGD +V + + ++ LR D+ GR+GG+EF Sbjct: 327 RANRYQQELTIMMLDIDHFKSINDEFGHQVGDVVLVEVAQIIKRNLRNIDIAGRYGGEEF 386 Query: 294 AVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSAD 353 +I+ T + R+ + ++ + + +S+G++ Q ++++ AD Sbjct: 387 LIILPQTNLNNGRQVGERIRRQVEIEGFEDSKEG-ITVSIGISQH--QGEEMVDYIERAD 443 Query: 354 LALYKAKKAGRNRTEV 369 LY+AK+ GRNR E Sbjct: 444 QLLYRAKRKGRNRIEC 459 >UniRef50_A1STZ3 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STZ3_PSYIN Length = 305 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 5/186 (2%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 F +S++ T + ++ +S DG+TG+ NRR+++ L NE+ C R + TL +I Sbjct: 117 FFVISHKNITNRKLAEEKVLHLSQIDGLTGIANRRYFDETLENEWKRCARSKQPLTLAMI 176 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAI 306 D+DHFK +NDT+GH GD ++V + L+ R +D+ R+GG+EFA+IM T A+ Sbjct: 177 DVDHFKLLNDTYGHQAGDNSLVMIGNLLKDLAQRPADLCCRYGGEEFAIIMPQTSNAQAV 236 Query: 307 TAMLRVHEGLNTLRLPNTPQVT---LRISVGVAP-LNPQMSHYREWLKSADLALYKAKKA 362 ++ + L +PN T L +S+G+A L Q + R + AD +LY+AKK Sbjct: 237 HIASKLITLIAALNIPNKKSPTKAILTVSIGLATVLPSQENDTRSLIAKADKSLYRAKKK 296 Query: 363 GRNRTE 368 GRNR E Sbjct: 297 GRNRVE 302 >UniRef50_Q3A8D4 Putative sensory transduction system, regulatory protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A8D4_PELCD Length = 536 Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 6/186 (3%) Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 + Q +L E RRL +S DG+TG+ NRR ++ L E+ R +L+++DID Sbjct: 340 LVAQRTYELDEANRRLASLSLTDGLTGIANRRSFDDHLAQEWKRALRDRHPLSLIMVDID 399 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 HFK+ ND +GH GD+ + + R LQ + R D++ R+GG+EFA+I+ T A + Sbjct: 400 HFKAYNDYYGHLAGDDCLRQVARMLQSVVARPGDLVARYGGEEFALILPQTD-HGAKSLG 458 Query: 310 LRVHEGLNTLRLPNTPQ---VTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRN 365 + ++P+ + +SVGVA + P + +K+AD A+Y+AK GR+ Sbjct: 459 ESCRAAVAGGKIPHHASPVKPVVTVSVGVATMIPHVEDDPSQLIKAADQAMYRAKLLGRD 518 Query: 366 RTEVAA 371 V A Sbjct: 519 HVVVEA 524 >UniRef50_C6P6Y5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y5_9PROT Length = 671 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 2/192 (1%) Query: 179 PIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRH 238 II V++ T+ + ++ L+ + D +T + NRRH+ + E +R+ Sbjct: 477 AIIREQQAAGIVVAFHDITERKKFEQELERRAQIDALTSLNNRRHFYELAEQEILRTKRY 536 Query: 239 NRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMS 298 + L+++D+DHFK INDT+GH VGD + L T+R D+IGR GG+EFA+++ Sbjct: 537 GKPLALMMLDVDHFKDINDTYGHHVGDTVLQTLGAVCLQTMREIDIIGRLGGEEFAILLP 596 Query: 299 GTPAESAITAMLRVHEGLN--TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLAL 356 A A A R+ + + L ++ IS+GV L + S + LK AD A+ Sbjct: 597 EATAAQAFDAAERLRLAVAAIAMPLEQGQTLSFTISIGVTGLVAKDSDIADMLKRADEAM 656 Query: 357 YKAKKAGRNRTE 368 Y+AK++GRNR Sbjct: 657 YQAKRSGRNRVC 668 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 105/189 (55%), Gaps = 2/189 (1%) Query: 180 IIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHN 239 I Y + V T+ +K +L+ + D +TGVYNR ++ L E +R+ Sbjct: 427 ISNAYGDQYVSVLMTDITEEEHYKSQLEHLIIHDELTGVYNRHYFNRTLEQEIKRHQRYQ 486 Query: 240 RDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSG 299 ++ +DIDHFK INDT+GHDVGD +V+L + + LR +DV R GG+EF ++M Sbjct: 487 SPFSMAFMDIDHFKMINDTYGHDVGDAVLVSLAKNISSLLRSTDVFCRVGGEEFVIMMPE 546 Query: 300 TPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKA 359 T E+A+ R+ + + + P+ + IS+G+ LN + + + K AD ALYKA Sbjct: 547 TSLENALIISERIRSTVEGISSKDVPE-KITISMGLVELN-SWDNVQSFYKRADEALYKA 604 Query: 360 KKAGRNRTE 368 K+ GRNR E Sbjct: 605 KENGRNRIE 613 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 10/287 (3%) Query: 86 QIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVA 145 R V P + + L T ++ GV G L I +M G + + Sbjct: 79 GRTGRHVLPSTALVLALFTLSLYMVSHGGVEG----SGFVWLFIFPPVVMLTFGLSIGIL 134 Query: 146 GLVLMVVSCLVTLELTGITVSF----NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAE 201 + +++ L L G + + + + L+L I+ L + T L Sbjct: 135 LMGALLLGVGAILFLPGDPFLYADYSQAFRIRYMLALLCCGIFAGLAEYTRRHTQRLLIL 194 Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 ++L + D +TG+ NRR L E RR R ++ I DIDHFKS+ND +GH Sbjct: 195 LTQQLAESARTDELTGLANRRALCERLEYEQVRARRTGRPLSIAICDIDHFKSVNDCYGH 254 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 GD + ++ L LR D I R+GG+EF +++ T A ++ + + Sbjct: 255 QCGDLVLQSVAGLLHDNLRHQDTICRWGGEEFLLLLPETDEAGAARLAEKLRSLVEAMEY 314 Query: 322 P-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + V++ +S GV P+ ++ AD LY AK+ GRNR Sbjct: 315 SYHGIPVSVTLSFGVHTCGPEG-DIDYHIRKADQKLYLAKEQGRNRV 360 >UniRef50_A8UWP4 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWP4_9AQUI Length = 425 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 81/362 (22%), Positives = 146/362 (40%), Gaps = 27/362 (7%) Query: 37 FARRVRLPRA-VGLAGMFLPIASTLVSHPPPGW---WWLVLVGWAFVWPHLAWQIASRAV 92 A+ + R V + + + S L + P W++ + + L + + Sbjct: 56 LAKNIWNIRIAVIVGVVMYALFSILDAIAFPQLKTQLWMIRFLFVIPFGVLFLFLTFKIQ 115 Query: 93 DPLSREIYNLKTDAVLAGMWVGVMG-------VNVLPSTAMLMIMCLNLMGAGGPRLFVA 145 + E + + V ++ P +++ L + Sbjct: 116 NERLIEFLHSLLVLIGGLGIVAMIYLISGDKYYLYYPGLMLVIFYAFTLSALRFYYATAS 175 Query: 146 GLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVI-----------YPLLFGWVSYQ 194 L L++ +V L L + + + S ++ + L + Sbjct: 176 VLALLLTYPVVDLYLLKTPEELHITNMFFLTSSALLGMPVSYLLERHARKDFLLTMLLAF 235 Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 K E RL+ +S DG+TGV NR ++ R E+ RR R ++L++DID FK+ Sbjct: 236 EKRKTDELNVRLRDISFIDGLTGVANRLRFDDFFRKEWRRARRTKRPISILMLDIDFFKN 295 Query: 255 INDTWGHDVGDEAIVALTRQLQITLR-GSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 ND GH GDE + + + +Q +R D++ R+GG+EF V++ T + A+ R+ Sbjct: 296 YNDLLGHLEGDECLKNVAKTIQSHIRADVDLVARYGGEEFVVVLPETDLKGALKVAERIR 355 Query: 314 EGLNTLRLPNTPQVT---LRISVGVAPLNP-QMSHYREWLKSADLALYKAKKAGRNRTEV 369 + L++ + + +S+GVA + P L AD ALY AKK GRNR E Sbjct: 356 RDIEGLKIAHPGSQVSKFVTVSIGVASIVPIDNLKKEVLLNMADKALYVAKKRGRNRVEA 415 Query: 370 AA 371 + Sbjct: 416 YS 417 >UniRef50_D2M3Q6 Diguanylate cyclase n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M3Q6_RHOPA Length = 502 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 5/235 (2%) Query: 138 GGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTAT 197 G R+FV + LV I + + L ++ + + Sbjct: 262 GVQRMFVWSDSTKPLVVLVAKSWDDIYAMWRREATWIGIVLLVLATFVAAVTVFFLREID 321 Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 + A+ +R+L+ ++ D +TG+ NRR ++ + E+ R N LL+ID DHFK+ ND Sbjct: 322 RRAQAERQLEELAITDPLTGLTNRRKFDAAIDTEWRRAIRQNTPIALLMIDADHFKAYND 381 Query: 258 TWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 +GH GD+ +V + + T+ R D RFGG+EFAV++ G A +A + + Sbjct: 382 RFGHQAGDQMLVGIAVCIADTVQRAGDCAARFGGEEFAVLLPGLTASAAEAVAETIRRKV 441 Query: 317 NTLRLPNTPQVTLRISVGVAPLNPQMSH-YREWLKSADLALYKAKKAGRNRTEVA 370 + + +SVGVA P +H + + +++AD ALY AK+ GRNR VA Sbjct: 442 QEWS---DIEGGVTVSVGVASTTPAAAHQWHDLVEAADRALYAAKELGRNRCVVA 493 >UniRef50_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5G2_ACIC5 Length = 369 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 3/212 (1%) Query: 156 VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGM 215 V L + V+ L L ++ T+L E LQ M T D + Sbjct: 144 VALRVLARQVAAQFQMRRQLLELREARAKQAKTEQRLRESQTRLKEANACLQEMVTTDAL 203 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQL 275 TGV NRR ++ L+ + R +LL++D+DHFK +NDT GH+ GD+ + + + L Sbjct: 204 TGVKNRRAFDEGLQQAWKMSARTKSPLSLLMVDVDHFKRVNDTLGHEAGDDVLRLVAQTL 263 Query: 276 QITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGV 335 Q R +D++ R+GG+EF V++ GT AE A+ ++ + L P L +S+GV Sbjct: 264 QFMTRSTDMVARYGGEEFVVVLPGTEAEPAVAFAEQLRLNIANLSWRGHP---LTVSIGV 320 Query: 336 APLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 + E + AD ALY+AK +GRNR Sbjct: 321 DSGSGSGKTECELVAHADAALYRAKNSGRNRV 352 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 1/206 (0%) Query: 166 SFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWE 225 + N L + ++ + T ++ L +T D +TG+ NRR + Sbjct: 771 TRNGTVLPVEIHAKLLDFDGKPVVLSIARDITDRKRLEQALMREATTDPLTGIRNRRQFF 830 Query: 226 TMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVI 285 E R+ R +L++D+D FK +ND +GH GD ++ + Q LR +D++ Sbjct: 831 VDAEREMGRAVRYGRPLAVLMLDLDRFKRVNDRFGHHAGDAVLMGCVQACQQALRETDIL 890 Query: 286 GRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ-VTLRISVGVAPLNPQMSH 344 GR GG+EFA ++ T + A+ A R+ + + +P + Q + +S+G+A P Sbjct: 891 GRLGGEEFAAVLLETDLDDALAAAERLRRAVEEMDVPFSGQRLRCTVSIGLALRGPGDGA 950 Query: 345 YREWLKSADLALYKAKKAGRNRTEVA 370 + L+ AD ALY AK+AGRNR +A Sbjct: 951 LDDILRRADSALYAAKEAGRNRVMLA 976 >UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0S0_DESOH Length = 374 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 6/188 (3%) Query: 187 LFGWVSYQTATKLAEHK--RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 LF V+ A ++ ++ + + +D +TG+YNRR++ E RR+ R +L Sbjct: 179 LFAAVAENVAIAVSNAMTLQQTRELIRKDELTGLYNRRYFFERFEREVYRSRRYGRTISL 238 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 ++IDIDHFK ND++GH GD + ++R + +LR DV+ R+GG+EF V++ T E+ Sbjct: 239 MMIDIDHFKEYNDSYGHLRGDRVLKTISRIFESSLRKIDVVARYGGEEFLVLLPETSREN 298 Query: 305 AITAMLRVHEGLNTLRL----PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 AI ++ + + + PN L I++GV+ + + L AD ALY K Sbjct: 299 AIRVAEKLRQAVEKVDFNEDAPNLGPCALTITIGVSAIPDDANEPILALDLADKALYMGK 358 Query: 361 KAGRNRTE 368 GRN+ Sbjct: 359 AQGRNQVC 366 >UniRef50_Q21HV6 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q21HV6_SACD2 Length = 301 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 2/188 (1%) Query: 181 IVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNR 240 ++ + Q L + + L+ ++TRD +TG+ NRR + + E RH R Sbjct: 110 VLAARMRSALRLIQAKRDLEKANKELERLATRDPLTGINNRRSFFKLAEAELTKTIRHGR 169 Query: 241 DATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGT 300 D LL++D DHFK INDT+GH GDEA++ +T Q R SD++ R GG+EFA+ T Sbjct: 170 DIALLMLDADHFKMINDTYGHAAGDEALLTITEICQNACRESDILARLGGEEFAICCPDT 229 Query: 301 PAESAITAMLRVHEGLNTLRLPN-TPQVTLRISVGVAPLNP-QMSHYREWLKSADLALYK 358 E A R+ + + + + + +S+G+ P Q E L+ AD LY+ Sbjct: 230 NLEGAYAVAERIRQQCENTVIEHNSASFGITLSIGITTFVPSQDKSITEMLQRADNLLYQ 289 Query: 359 AKKAGRNR 366 AK+ GRNR Sbjct: 290 AKEMGRNR 297 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 2/171 (1%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + + L+ S +D +T +YNRR+ E L+ E +R L++ID+DHFK NDT+G Sbjct: 902 QLRESLKAQSIKDSLTDLYNRRYMEESLKREISLAQRKQHSVGLIMIDVDHFKEFNDTFG 961 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H GD + ++ L I +R D+ R+GG+EF +I+ + ++ +G+ L Sbjct: 962 HKAGDLVLQEVSNFLMINVRSGDIACRYGGEEFLLILPEASLTDSQQRAEQIRQGIKQLD 1021 Query: 321 LPNTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 Q ++ +SVGVA ++ + +++AD ALY+AKK GR+R V Sbjct: 1022 FKRYDQSFRSVTVSVGVASFPDHGTNNDQLIQAADTALYQAKKQGRDRVVV 1072 >UniRef50_Q1K485 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K485_DESAC Length = 370 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 5/175 (2%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 + + + ++ RD +TG +NR ++ +R+ + +L++ DIDHFK IND Sbjct: 191 IKKRNAEIAELAVRDSLTGSFNRGYFNETFPGAIRRAQRYQQSLSLIMCDIDHFKLINDH 250 Query: 259 WGHDVGDEAIVALTRQLQITLRGS-DVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 +GH GD I ++ + L +LR D + R+GG+EF +++ T E A+ R+ + Sbjct: 251 YGHQTGDRVIKSVAQGLAQSLRQGVDWLARYGGEEFVIVLPETNLEGALVVAERMRRSIA 310 Query: 318 TLRLPNTPQ-VTLRISVGVAPLNPQMSHY---REWLKSADLALYKAKKAGRNRTE 368 + PQ + L S GVA +P+ + + +AD LY+AKK GRN Sbjct: 311 DQEIACDPQSIRLTASFGVAGCDPEHASMLTGNGMIAAADRCLYQAKKEGRNCCC 365 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 2/178 (1%) Query: 194 QTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFK 253 + +L E + +L M+T D +TG+ NRR + E +R R L++DID FK Sbjct: 275 RFLKELREAQEKLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRFK 334 Query: 254 SINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVH 313 INDT+GH GD + L+ +R D++ R+GG+EF +++ T +A T ++ Sbjct: 335 KINDTYGHQAGDAVLSEFGATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIR 394 Query: 314 EGLNTLRL-PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + Q+ + S+G++ + + + AD ALY+AK +GRNR A Sbjct: 395 AVTAATPIMFAGRQIAVTTSIGISMMQ-GDETAKAMIARADAALYEAKNSGRNRVVCA 451 >UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7C6_9DELT Length = 297 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 1/167 (0%) Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + +ST DG+T V+NRR++ L E RR++R LLI DIDHFK NDT+GH Sbjct: 128 HEEIFRLSTVDGLTQVFNRRYFMETLERELSRARRYDRPLALLIFDIDHFKRCNDTYGHR 187 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL- 321 GD + + + + R DV+ R+GG+EF VI+ A ++ + + Sbjct: 188 AGDFVLRRIAELVTMRARKVDVVSRYGGEEFTVILPEIDIRGASAFAEKIRKLIADETFI 247 Query: 322 PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 ++ + IS+GVA + P +++ + +++AD LY AK GRNR Sbjct: 248 FEGRKIPVTISIGVAEIGPSVANADDMIQTADRRLYAAKTGGRNRVV 294 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 70/223 (31%), Positives = 102/223 (45%), Gaps = 7/223 (3%) Query: 152 VSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMST 211 + +V +L GI ++ + ++V L T + L+ + Sbjct: 277 LILMVGYDLAGILTEWSKRAGQLAAGFLLLVALATLGLRSYLTTVRQR----EELRRQAD 332 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 D +TGV NRRH ++ +E R+ L ++DIDHFK+INDTWGH GD I L Sbjct: 333 TDPLTGVPNRRHLMSVAEHELARTLRYGGALALFMVDIDHFKAINDTWGHPTGDRVIQVL 392 Query: 272 TRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP---NTPQVT 328 + + R D GR GG+EFA ++ T E A R+ E + + V Sbjct: 393 AAAMAASAREQDTAGRLGGEEFAAVLPETDLEGAAIMAERLREAVEAITSALDDQGQPVR 452 Query: 329 LRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 +S+GVA + + L AD ALY AK GRNR E+AA Sbjct: 453 FTVSIGVAAIQLGDGSVEDILGRADRALYAAKHGGRNRVEMAA 495 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 2/190 (1%) Query: 182 VIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 ++ + T + L+ ++ D +T ++NRR++ T+ E+ R++ Sbjct: 233 AAGQVVGAMEIIRDITDSKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHP 292 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 L +IDIDHFKS+ND +GH VGD + + + L LR D++ R+GG+EF +++ T Sbjct: 293 MALCMIDIDHFKSVNDRYGHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFVILLPETD 352 Query: 302 AESAITAMLRVHEGLNTLRLPN-TPQVTLRISVGVAPLNPQMS-HYREWLKSADLALYKA 359 ++A + R+ + R+ + V++ +S+GV + + L +AD LY+A Sbjct: 353 LQTACASTERLRVAVAERRIETPSGPVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRA 412 Query: 360 KKAGRNRTEV 369 K+AGRNR E+ Sbjct: 413 KQAGRNRVEI 422 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 2/188 (1%) Query: 185 PLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 + + + + L+ ++TRD +TGV NRR +L E + RR+NR L Sbjct: 209 GTMVLEGIILDISDRKQLENELEALATRDSLTGVLNRRECSRVLIEELERARRYNRPLAL 268 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 L ID DHFK INDTWGH GD + +++ L+ ++R D +GRFGG+EF +I+ Sbjct: 269 LWIDFDHFKEINDTWGHAAGDSVLCSISSLLEDSVRSVDTLGRFGGEEFVLILPEMDVAE 328 Query: 305 AITAMLRVHEGLNTLRL--PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKA 362 A R+ + + + + + L IS+GVA +AD A+Y+AKK Sbjct: 329 AEETAERLRQRVCNQPVALESGHNIRLTISIGVAVFPDHGDTLDALCAAADKAMYRAKKQ 388 Query: 363 GRNRTEVA 370 GRN +A Sbjct: 389 GRNCIAMA 396 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 78/287 (27%), Positives = 117/287 (40%), Gaps = 3/287 (1%) Query: 83 LAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRL 142 LA A + V+ + + V PS L+ + + Sbjct: 116 LARARAELQRSEARYRLLAEHVADVIVTLDGEGRFLYVSPSAQALLGYAPDELAGRPLCD 175 Query: 143 FVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEH 202 +V L + + A + P +L ++ + Sbjct: 176 ITPSAEAPRPGTVVELTVRCRDGTTRWAEVNTAALPPGAGDGAVL--VCVFRDISARKRL 233 Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + L+ ++T DG+TG YNRR + + E R R +LL++DIDHFK +ND +GH Sbjct: 234 ESDLKHLATTDGLTGAYNRRSFVEVCGQELQRADRRARPTSLLLMDIDHFKRLNDRFGHA 293 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 GDE + + + LR DV+GR GGDEFAV++ T E A ++ L +P Sbjct: 294 AGDEVLRQIVETGRRVLRSEDVVGRIGGDEFAVLLPATTLEQAGRVAEQLRTTYERLAVP 353 Query: 323 N-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 T +S GVA P + E L+ AD ALY AK AGRN Sbjct: 354 ARGGTATFTVSFGVAEWKPHLRTVEELLQRADRALYAAKNAGRNCVR 400 >UniRef50_B4B6I9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B6I9_9CHRO Length = 484 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 77/287 (26%), Positives = 134/287 (46%), Gaps = 12/287 (4%) Query: 92 VDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLM--IMCLNLMGAGGPRLFVAGLVL 149 + L L + +L W+ + L S L+ I NL + L + Sbjct: 194 AESLRGNWQPLLREKILDLFWIELDKSLDLSSQFQLIDNINEANLPSSQLKALAAWQVKA 253 Query: 150 MVVSCLVTLE-LTGITVSFNSAPLEWWLSLPIIVIYPL----LFGWVSYQTATKLAEHKR 204 ++S L+ E L G+ + + W I L + +L + Sbjct: 254 QIISPLIEQEKLWGVLIVHHCQSSHQWKEEETQFITQLSKQTAIAIQQSKLYQELKTANQ 313 Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 L+ ++ D +T + NRR ++ ++ E+ RR +L++ DIDHFK ND +GH G Sbjct: 314 ELERIAYLDSLTQIPNRRQFDLTIKREWFRLRRQQLPLSLVLCDIDHFKQYNDFYGHPQG 373 Query: 265 DEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 D + + + + L R +D++ R+GG+EFAVI+ T + AI + ++ + + L+LP+ Sbjct: 374 DLCLKQVAQGIASNLKRSADLVTRYGGEEFAVILPNTDLDGAIHVVKQIQQAIAQLKLPH 433 Query: 324 TP---QVTLRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNR 366 + + +S+G+A + P + Y E + AD ALYKAK GRNR Sbjct: 434 QGLGLEKYVSLSMGIATMIPGPNLSYEELISLADKALYKAKANGRNR 480 >UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YC42_9BURK Length = 409 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 89/388 (22%), Positives = 158/388 (40%), Gaps = 51/388 (13%) Query: 18 HGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAG-MFLPIASTLVSHPPP-------GWW 69 E L H + +R RL + A F + ++ P Sbjct: 34 WNSEYALVLDEAHASN----LQRTRLLSPLAAALNGFFAVLFLWMALSAPDDDPAYRWKL 89 Query: 70 WLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMI 129 W +L A+ + + A PL + G W+ V+ + V AML+ Sbjct: 90 WQLLTHTGM---GAAFALCAWACRPLEHRHRSWS------GRWLPVLAMAVCIVFAMLIT 140 Query: 130 MCLNLMGAGGPRLFVAGLVLMVVSCL---VTLELTGITVSFNSAPL-------------- 172 + F+A +V + L V L G+ S + Sbjct: 141 AIDQWVTPAITPFFIACIVTSLTIYLRPHVAAALFGVAFVLFSTLIGMTQHNPEMLLSNR 200 Query: 173 EWWLSLPIIVIYPLLFGWVSYQTA-----------TKLAEHKRRLQVMSTRDGMTGVYNR 221 L++ +I + W + T T+L +R L+ ++ +DG+TG++NR Sbjct: 201 INGLAVCVIGFCLSVLMWRKFTTIAVQKHQLEKAHTELQLKQRELERLTRQDGLTGLFNR 260 Query: 222 RHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG 281 + + NE +R T+L++D+DHFK INDTWGH GD + + + + ++R Sbjct: 261 NTFVELSTNELKRAKRQGSATTILLLDLDHFKRINDTWGHPAGDVVLRHVAQTMVNSVRS 320 Query: 282 SDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQVTLRISVGVA-PLN 339 +D++GR GG+EF V++ T AE++ ++ + L + ++ + S+G++ Sbjct: 321 TDLVGRLGGEEFIVLLPHTTAEASRKIAEKIRQRLEVSDIRWEGKRIAVTASIGLSGTTA 380 Query: 340 PQMSHYREWLKSADLALYKAKKAGRNRT 367 + + AD ALY AK+ GRNR Sbjct: 381 EESREFDSLYTEADKALYLAKQRGRNRV 408 >UniRef50_B5JXY3 Ggdef domain protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXY3_9GAMM Length = 394 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 80/341 (23%), Positives = 139/341 (40%), Gaps = 20/341 (5%) Query: 43 LPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIA---SRAVDPLSREI 99 L + P W + + W +A ++ P Sbjct: 59 LLVVSSFDLFCHSVFRAKQPAEPGRGLWYPVYLTCCAIFSVVWSVATIEMMSILPAQGNY 118 Query: 100 YNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFV----AGLVLMVVSCL 155 L A +AG+ V +GV + L+ + + R A LM Sbjct: 119 ACLLVLAAVAGVGVSEVGVRRSSAAVYLLGLFAPVSAWLLWRGVANDTGAAWFLMGYGVA 178 Query: 156 VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGM 215 + + + + S+ + + + ++ +L E + L+ S+ D + Sbjct: 179 LWIGSARLAENIRSSLRLQFENQELAGSL--------KRSNNRLQEANQELKHASSTDSL 230 Query: 216 TGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQL 275 T V NRR++E L E+ R D ++L++D+D FK ND GH GD+A+VA+ L Sbjct: 231 TQVANRRYFEHHLEGEWQRLAREEGDLSVLMVDVDQFKHFNDVQGHQAGDQALVAVAGAL 290 Query: 276 QITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL---NTLRLPNTPQVTLRI 331 Q L R +D++ R+GG+EF V++ T A+ + E + + + + Sbjct: 291 QSALRRPADILARYGGEEFIVLLPNTSRSGAMRVAQIMRERVELLELEHPELDDRQHVTV 350 Query: 332 SVGVA-PLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 SVG A + + + R + AD ALY+AKK GRN E+A+ Sbjct: 351 SVGGAHAMVKESATSRGLIAEADKALYQAKKNGRNCVEMAS 391 >UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0SXM5_ACILW Length = 440 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 80/350 (22%), Positives = 145/350 (41%), Gaps = 18/350 (5%) Query: 34 GLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVD 93 R++ + F + V++ ++ + + + + Sbjct: 65 SHHNLRQINYLAQIAFLLYFFADILIIPDMFFISGLMRVVLVLGTMFC--CYYLFKKHKN 122 Query: 94 PLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAM------LMIMCLNLMGAGGPRLF---- 143 + V A W+G++ +++ P A + I+ NL ++ Sbjct: 123 IQILDRILPIGTTVAAAAWIGLLALSISPHVATYIYASAIFILIANLCVQTQFKVAVYCS 182 Query: 144 -VAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEH 202 + L +M+ S +PL W I +L S+ + + Sbjct: 183 ILIALFIMLGVSQFMSASQAFIFSVVFSPL--WFFSIYINWNNILNVRRSFLRSLLDEWN 240 Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 + L+ ++ D +T +YNRRH+ M +H LL+ D+DHFK+IND++GHD Sbjct: 241 YQTLKNLAHTDDLTQLYNRRHFVDMAERSIHQWPKHASS-CLLMFDVDHFKNINDSYGHD 299 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL- 321 VGD + + + +R SDV+ RFGG+EF ++ T + ++ R+ + + Sbjct: 300 VGDRVLQLIAEVTRKEMRHSDVLARFGGEEFIALLEDTQLQDSLVIAERIRCAIQKQYIY 359 Query: 322 -PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + IS+GVA L + +K AD+ALY+AKK+GRNR EV Sbjct: 360 VEPNHTIRFTISIGVAELESHTQPLEDLIKQADIALYQAKKSGRNRIEVY 409 >UniRef50_Q1NKN5 GGDEF:Response regulator receiver n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKN5_9DELT Length = 333 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 57/175 (32%), Positives = 98/175 (56%), Gaps = 5/175 (2%) Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L E R+L +S DG+TG+ NRR ++ L+ E+ R+ TL++ DID FK ND Sbjct: 152 QLEEANRKLNELSLTDGLTGLANRRSFQEALQTEWRRAMRNRHFLTLILADIDSFKQFND 211 Query: 258 TWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 T+GH GD+ +V + + ++ L R SD++ R+GG+EFA+++ T + + + Sbjct: 212 TYGHVAGDDCLVQIAKVIKSPLMRSSDLVARYGGEEFAILLPDTDLKGGEHLAEEIRREV 271 Query: 317 NTLRLPNTPQ---VTLRISVGVAPLNPQMSHYR-EWLKSADLALYKAKKAGRNRT 367 L + + + +S GVA + P++ + + +AD ALY AK+ GRN+ Sbjct: 272 EQLEIDHENSATGAHVTMSFGVASVVPRLDLVELDLVCAADKALYAAKEDGRNQV 326 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 5/234 (2%) Query: 140 PRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGW--VSYQTAT 197 R V G VV L +T + L+ L+ V + Sbjct: 493 LRSVVEGTPWSVVLTLPVAGITASRLLGIIITLQLALTALFYFFGRERGVRDRVQQLLRS 552 Query: 198 KLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIND 257 +L E L +T D +TG++NR + L E RR + +L++ D+DHFK +ND Sbjct: 553 ELQERAAALARQATTDPLTGLHNRLRFNEGLAQELARVRRTGQPLSLVMFDVDHFKEVND 612 Query: 258 TWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLN 317 +GH GD+ ++ L++ LR +D++ R+GG+EFA+++ +A+ + + Sbjct: 613 RYGHPTGDQVLIRLSQTAAAQLRQTDLLARWGGEEFAILLVDADLHAAVEVAENLRRLVA 672 Query: 318 TLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + S GVA P L+ AD ALY+AK GRNR E+ A Sbjct: 673 RTPFDQIGS--VTASFGVAECRPD-ESADSLLERADAALYRAKSNGRNRVEIDA 723 >UniRef50_Q1IJ19 Diguanylate cyclase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ19_ACIBL Length = 369 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 78/353 (22%), Positives = 137/353 (38%), Gaps = 19/353 (5%) Query: 25 TPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTL-VSHPPPGWWWLVLVGWAFVWPHL 83 + + R+ + R L GM + + +TL + + W Sbjct: 20 FSELDQATVQRRWREVNTILRLAMLGGMQIQLEATLNMLLDFAAEISFFEKSLVYFWEED 79 Query: 84 AWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLF 143 + Q+ R + RE + W G +L + ++ L G Sbjct: 80 SEQVKLRLAGGMDRETAEPFVRGNIFNFWATRFGRPLLVTAGHNLLSDAALESLGARSAL 139 Query: 144 VAGLVLM--VVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAE 201 + LV+ V+ + + + A L W L+L + Sbjct: 140 IVPLVVSNKVIGSMQLFSAEHESFTREDAQLFWMLTLVA-------------ENQLTRDY 186 Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 L + D +TG+ R ++E L E R +L++D+DHFK++NDT+GH Sbjct: 187 ENEGLIKFAFTDFLTGLKTRGYFEQQLELEIKRAERKRTPIAMLMLDLDHFKTLNDTYGH 246 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 VGD+ + ++ L LR D R+GG+EF +++ T A+ R+ G+ + Sbjct: 247 HVGDQVLRDVSAVLMKDLREVDTAARYGGEEFVIVLPETNTTGAMQVANRIRRGVEQAKF 306 Query: 322 PNTPQVTL---RISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + IS+G+A + RE +++AD ALY+AK GRN+ A Sbjct: 307 FAGSPRQVERLTISIGIAIYDQDAQSKRELIEAADAALYQAKGQGRNQVVTHA 359 >UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geobacter RepID=C6E9C6_GEOSM Length = 713 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 5/198 (2%) Query: 176 LSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNC 235 L ++ + L + + T++ E R + +S D +TG+YNRR + L E + Sbjct: 481 ADLQVLTSFANLASLMIER--TEVLEESERFEQLSVTDALTGLYNRRFLKNRLEEELNRS 538 Query: 236 RRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAV 295 R + T++ ID+D FK+ ND GH GD+A+ ++ +LR D++ R+GG+EF Sbjct: 539 IRQGLNLTVIFIDLDFFKNYNDLCGHLAGDDALRITAEIIKASLRDMDIVARYGGEEFCA 598 Query: 296 IMSGTPAESAITAMLRVHEGLNTLRLPNT---PQVTLRISVGVAPLNPQMSHYREWLKSA 352 ++ GT A+ R+ + + P PQV L S+GVA + + ++ Sbjct: 599 VLPGTSKVEAMIVAERIRSEIEREKFPGESEIPQVRLTASLGVASFPEDGRTFTALVHAS 658 Query: 353 DLALYKAKKAGRNRTEVA 370 D+ALY+AK GRNR A Sbjct: 659 DVALYEAKAGGRNRIVAA 676 >UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0Y0_9NEIS Length = 528 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 88/340 (25%), Positives = 145/340 (42%), Gaps = 17/340 (5%) Query: 41 VRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIY 100 + AG + + LV W F+ L P + Sbjct: 181 SFVASVFSSAGALIWCYTNLVDPTGLLPIWQGWWLGGFLQCLLLGAPLLLVSQPALQRWR 240 Query: 101 NLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAG-LVLMVVSCLVTLE 159 + +W + S +++ + ++ G L++ V + Sbjct: 241 D-----RHTRLWRTAAAESRRLSLQLVIAIVAGVLIYGWLTLWLGSNTVRHALRASELAI 295 Query: 160 LTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSY--------QTATKLAEHKRRLQVMST 211 L G + + ++ +I + FG+ + + +LAE +L ++ Sbjct: 296 LPGAVTTMLATTWTFYWVFALIAAFVGFFGYRMFTYWLDSSTRLVNELAEANSKLAHLAR 355 Query: 212 RDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVAL 271 D +TG+ NRR E L + RR+ A+L+++DIDHFK +ND +GHD GD I AL Sbjct: 356 TDTLTGLPNRRALEEALEQQLQRSRRNGEQASLVLLDIDHFKVVNDRYGHDAGDAVIRAL 415 Query: 272 TRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP-QVTLR 330 + + T+R DV GR+GG+EF V+++ E A R+ + + + + V Sbjct: 416 GKAMSETIRNVDVAGRWGGEEFLVVLANVDEEGAAAFAERLRTRVESSTVAHGELHVRYT 475 Query: 331 ISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 IS+GVAPL+ WLK AD ALY+AK GRNRT +A Sbjct: 476 ISLGVAPLSTPHR--EAWLKRADEALYRAKLDGRNRTAIA 513 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 2/170 (1%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + L+ S RD +TG+YNRR+ E E +R + +LL+ID+DHFK NDT+G Sbjct: 374 RLRATLRQQSIRDPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHFKQHNDTYG 433 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H +GD + L LQ R D++ R+GG+EF V++ A A + + L Sbjct: 434 HALGDTLLRRLATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEALRRSVENLA 493 Query: 321 LPNTPQ--VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + V L IS+G A + + L AD ALY+AK GRNR E Sbjct: 494 VTSNDAEFVALTISIGGASWPDHATTPEDLLARADAALYRAKHRGRNRVE 543 >UniRef50_A5UW82 Diguanylate cyclase n=2 Tax=Roseiflexus RepID=A5UW82_ROSS1 Length = 387 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 81/331 (24%), Positives = 146/331 (44%), Gaps = 16/331 (4%) Query: 41 VRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDP--LSRE 98 + + AG+ I TL P + + F++ L + ++ P L + Sbjct: 61 IYTINHIAFAGVCFAIVWTLGQQQIPLERVERFMLFFFIFQSLVF----NSIVPALLRQH 116 Query: 99 IYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTL 158 + NL D + +W +L + + + GA + + +VV +V+ Sbjct: 117 LDNLFLDTIGDDIWF------LLIVCVLAVHLYDLRRGALIAGIVYSLSFAIVVVQIVSW 170 Query: 159 ELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV 218 + GI + L +L ++++ ++ +L + ++ D +T + Sbjct: 171 NMPGIDGEDSEHVLRAYLMGGALLVFLVVLAMYRSH-IERLHTEYEVMANLAYTDTLTSL 229 Query: 219 YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQIT 278 NRR + R+ ++ + + D+DHFK +NDT GH VGD+ + + + ++ Sbjct: 230 PNRRRLYEDVYRLIALAERYGQEFCVCLFDLDHFKRLNDTHGHLVGDQVLQEVAQVARLH 289 Query: 279 LRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPL 338 LR +D+ GR+GG+EF V++ T A TA+ RV L+T+ LPN + S G+A Sbjct: 290 LRAADLFGRWGGEEFVVLLPQTRLNDAQTALERVRLALHTIALPNVH--AITASFGIAAY 347 Query: 339 NPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 P + L AD ALY AK GRNR + Sbjct: 348 LPGDTS-ESLLHRADQALYLAKATGRNRIVL 377 >UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TG17_HELMI Length = 324 Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 4/180 (2%) Query: 193 YQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHF 252 + +L E R+LQ +S+ DG+TG+ NRR ++ L +E+ R+ +L++ DID F Sbjct: 136 LRVTAELEEAVRKLQNLSSLDGLTGLANRRRFDEYLASEWKRAIRNGTPISLILFDIDWF 195 Query: 253 KSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLR 311 K NDT+GH GD+ + A+ + + R SD++ R+GG+EFAVI+ T E A+ Sbjct: 196 KPYNDTYGHIQGDDCLKAIASLMPKVVRRSSDLVCRYGGEEFAVILPDTSQEGALAVAES 255 Query: 312 VHEGLNTLRLPNTPQV--TLRISVGVAPLNPQMSH-YREWLKSADLALYKAKKAGRNRTE 368 + E L+ + + + +SVGVA P S + AD ALY+AK+ GRNRT Sbjct: 256 IREALSEAGIEHRQSPLDRVTVSVGVATAYPSPSSEPVTLIGYADEALYEAKRQGRNRTV 315 >UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRM0_AZOC5 Length = 514 Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 4/241 (1%) Query: 131 CLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGW 190 G G + A + + + + I + + L ++ + + Sbjct: 251 VTLSYGDGKRTFYAAPVPQLPLVVATGQSIRDIFLPWRYRVLVGTAAVLTVGFASIAIAL 310 Query: 191 VSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID 250 V + + + L +S D +TG+ NRR + + E+ +R +L+IDID Sbjct: 311 VLRHDLMRRSRLQAELLQLSLTDDLTGIANRRRFFDVAIREWQRAQRLGSPVAVLMIDID 370 Query: 251 HFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAM 309 FK +ND GH GD + A+ + ++ +L R +D+ R+GG+EF I+ T A Sbjct: 371 RFKLLNDRLGHAAGDAVLQAIAQLIRHSLRRPADLAARYGGEEFTAILPDTDMAGAFQTA 430 Query: 310 LRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTE 368 R+ + + + +S+G+A + + +AD ALY+AK++GRNR Sbjct: 431 ERIRTQVERDVIRGDHP--VTVSIGIAAAIASPNETFENVVAAADRALYRAKESGRNRVM 488 Query: 369 V 369 V Sbjct: 489 V 489 >UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain protein) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9W6_SHEAM Length = 557 Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 90/349 (25%), Positives = 156/349 (44%), Gaps = 22/349 (6%) Query: 37 FARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVW-----------PHLAW 85 F+ + G + + + ++ PHL++ Sbjct: 216 FSFILLNLSYTGHGQFWFWPGLSHWRQWSHPMLMTLYCVSGLMFALRFLGIDKLRPHLSY 275 Query: 86 QIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFV- 144 + AV ++ + + TD G+ V + L+ + L G RLF+ Sbjct: 276 IVLGLAVLMMTVQGVAMTTDDRELGLIFAFDFVYIFTLLMPLLGILAWLHGLPTARLFLL 335 Query: 145 AGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKR 204 A L MV SC L + G + S + + I + + ++ + +E +R Sbjct: 336 ASLSTMVGSCTTGLAVEG----YISFNQWTYRAAEIGMFIDAMLLALALAAQFRQSEQER 391 Query: 205 RL-QVMSTRDGMTGVYNRRHWETMLRNEFDN-CRRHNRDATLLIIDIDHFKSINDTWGHD 262 L Q ++ D +TG+ NRR + L+ + +R R L++IDID FKSINDT GH+ Sbjct: 392 VLAQQLAATDPLTGIANRRAFSEQLQRLWHLDSQRRCR--ALIMIDIDRFKSINDTLGHE 449 Query: 263 VGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP 322 VGD+ + + R ++ ++R D GR+GG+EF V+++ E A R+ + +L P Sbjct: 450 VGDKVLTDIARVIRYSIRNRDQCGRWGGEEFVVLLASASEEEAGIIAERIRHNIESLSFP 509 Query: 323 N-TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 ++ + SVGV L+ S + + L+ AD A+Y AK AG NR ++A Sbjct: 510 APANKLKVTASVGV-CLDEGHSRHEDILRRADEAMYHAKDAGGNRVKLA 557 >UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales RepID=B4RZE8_ALTMD Length = 325 Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Query: 184 YPLLFGWVSYQTATKL--AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRD 241 + +L V+ Q KL + L+ S DG+TG++NRR+W+ + C R ++ Sbjct: 131 FCMLVYDVTEQALGKLGMEHLNQELKTASRVDGLTGLFNRRYWQERFDEMYKLCVRRDKP 190 Query: 242 ATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTP 301 +T +++DIDHFK INDT+GH GD+ I L ++ +R +D+ GR+GG+EFA+I++ + Sbjct: 191 STAVMLDIDHFKRINDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDST 250 Query: 302 AESAITAMLRVHEGLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAK 360 E A R+ + L + + + +S+G+A WL+ AD ALY AK Sbjct: 251 VEDARIVAERIRQLAQRLVVEHEGESINFTVSLGLAQFCSAFKGPLAWLECADKALYDAK 310 Query: 361 KAGRNRTEVA 370 ++GRN+ V Sbjct: 311 ESGRNQYRVY 320 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 8/230 (3%) Query: 148 VLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEH----K 203 ++ + V G+ + + E + + ++ V+ ++ E Sbjct: 262 SVIALPFSVDRGQYGVFLVRRTREQELFGPADLEFAQAVITAAVAVIQRAQMVESTMADN 321 Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 RL+ ++ D +T + NRR + E + R++ LL+ID+DHFK +NDT+GH V Sbjct: 322 ARLEQLAQTDPLTQLLNRRALTERITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHLV 381 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 GD+ + + + L T+RGSD+ R+GG+EF V++ T A+ R+ + Sbjct: 382 GDDVLRDVGQLLGHTIRGSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFAR 441 Query: 324 T---PQVTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTEV 369 + L S+GVA + + + AD ALY+AK GRNR + Sbjct: 442 DSMAEPLKLTASIGVAVFPAARIENVEDLFARADAALYRAKAEGRNRVRM 491 >UniRef50_Q0A8G7 Diguanylate cyclase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8G7_ALHEH Length = 237 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 3/202 (1%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 + + + ++ + + + + T+ + R++ ++T D +TG+ NR + Sbjct: 30 DGSDITVEITTNAAYYKGVKLIFCNCRDITERKRDQERIRYLATTDALTGIMNRGEFTRH 89 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGR 287 L E + R NR +++ D+DHFK +NDT+GHD GDE + Q+ +R DV R Sbjct: 90 LTKEIERAARFNRPVAVVMYDLDHFKRVNDTYGHDAGDEVLKTAVAQVNNAIRRVDVHAR 149 Query: 288 FGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYRE 347 +GG+EF +++ T +A+ + R+ + + S GV L P+ + Sbjct: 150 WGGEEFILLLPETDLAAAVKSAERLRAAIAEHPFK--QPERVTASFGVTTLGPRDR-FDV 206 Query: 348 WLKSADLALYKAKKAGRNRTEV 369 +K AD ALY AK AGRNR E Sbjct: 207 LIKRADDALYLAKHAGRNRVEA 228 >UniRef50_D2BVU6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Dickeya dadantii Ech586 RepID=D2BVU6_DICD5 Length = 483 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 175 WLSLPIIVIYPL---LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNE 231 W+ + YP + S T L + + LQV++ D +TG+ NRRH++ + Sbjct: 272 WIHAEAMASYPEDGNTVFYGSMLDITDLKQSETLLQVLAQTDSLTGIANRRHFDERYQQL 331 Query: 232 FDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSD-VIGRFGG 290 + +LL+IDID FK ND++GH GD I ++ L L S+ ++GR+GG Sbjct: 332 WRQHESIQMPLSLLMIDIDRFKRFNDSYGHSKGDACIKSVVETLAGQLPSSECLLGRYGG 391 Query: 291 DEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN--TPQVTLRISVGVAPLNPQ--MSHYR 346 +EF V++ T + A+ R + + ++ +P+ +PQ + +S+GVA P S Sbjct: 392 EEFTVVLPQTDYQQALALAERCRQAVESMEIPHTKSPQGVVTVSIGVAVARPGDAGSSMT 451 Query: 347 EWLKSADLALYKAKKAGRNRTEV 369 + AD ALY+AK GRNR E Sbjct: 452 QLSNDADDALYRAKHLGRNRVEA 474 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 5/285 (1%) Query: 88 ASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGL 147 A ++ P R++ G + L + F Sbjct: 98 AGLSLPPAYRKLSERVAVGPSVGSCGTAAHWKRTIVVDDIQTSPLWAHALHKVQPFGLRA 157 Query: 148 VLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQ 207 + +L G ++ P + ++ Q H+++L Sbjct: 158 CWSMPIFSSDRQLLGTLATYYREPRSPSQEELALAQRITRIIAIALQ----RDGHEKQLY 213 Query: 208 VMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEA 267 ++T+DG+T + NRR + + E + RRH ++L++D+DHFK IND +GH VGDE Sbjct: 214 RLATQDGLTELNNRRQFIELADREIERSRRHGSRMSVLMMDLDHFKDINDHYGHAVGDEV 273 Query: 268 IVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN-TPQ 326 I ++ + LR SD+ GR GG+EFA ++ T + A R+ ++ RL + Sbjct: 274 IRHFSQVCREVLRASDLCGRLGGEEFAAVLPDTGLDDARQVAERLRSLASSARLSAVSGS 333 Query: 327 VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + +S+GVA + + E L AD LY+AK+ GRNR AA Sbjct: 334 LGYTVSIGVAERHADETDIDEVLGRADKQLYQAKRDGRNRVSGAA 378 >UniRef50_B2IVB0 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Bacteria RepID=B2IVB0_NOSP7 Length = 742 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 9/228 (3%) Query: 150 MVVSCLVTLELTGITVSFNSAPLEWW----LSLPIIVIYPLLFGWVSYQTATKLAEHKRR 205 +VV L L G+ ++ W ++L + + +L + + Sbjct: 502 LVVPILQKERLWGLLIAHQCRNARQWQQSEINLFNQLAGQAAIAIQQSELYHQLQQANQE 561 Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 LQ ++ DG+T V NRR ++ ++ R +L++ D+D+FK NDT GH GD Sbjct: 562 LQRLACSDGLTQVGNRRCFDDTFNTQWQRLAREQGSLSLILCDVDYFKLYNDTHGHLAGD 621 Query: 266 EAIVALTRQLQITLR-GSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 +A+ + + + T++ +D++ R+GG+EFAVI+ T E AI + ++ L++P+ Sbjct: 622 DALRQVAKVISQTVKCPADLVARYGGEEFAVILPNTDIEGAIAVAKDIQTNISALKMPHP 681 Query: 325 PQVT---LRISVGVAPLNPQMS-HYREWLKSADLALYKAKKAGRNRTE 368 + +S+GVA + P + +AD LY+AK GRN Sbjct: 682 HSQVSEFITLSLGVATITPHSQLSPATLIAAADQGLYQAKAQGRNCVV 729 >UniRef50_Q47I66 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47I66_DECAR Length = 322 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 4/229 (1%) Query: 143 FVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEH 202 F ++++S + ++ + + + ++++ + ++ Sbjct: 90 FSPWTPIVLLSSVNDEDILAKGILAGADDFLYKPVSEVVLLAKVRAMLRIATRQQEICAV 149 Query: 203 KRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHD 262 R+L+ ++ D +TG+ NRRH++ L E+ C R +++I D+D FK ND +GH Sbjct: 150 HRQLKEIAILDSLTGIPNRRHFDDTLAAEWKRCIRTETPLSIVISDVDFFKQFNDIYGHQ 209 Query: 263 VGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 GD + A+ L +L R D + R+GG+EF I+ GT A A R+ + L + Sbjct: 210 AGDVCLKAVASSLSESLFRVEDTVARYGGEEFVAILPGTDANGAYAVAERMRQSARDLCI 269 Query: 322 PNTPQV--TLRISVGVAP-LNPQMSHYREWLKSADLALYKAKKAGRNRT 367 P+ + + S GVA ++ L++AD LY AK+AGRNR Sbjct: 270 PHERGIDGRISCSFGVASTCPSADKAPQQLLRTADAGLYAAKRAGRNRV 318 >UniRef50_B8GR45 Diguanylate cyclase with PAS/PAC sensor n=27 Tax=Gammaproteobacteria RepID=B8GR45_THISH Length = 332 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 103/173 (59%), Gaps = 1/173 (0%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L + L +S D +T + NR WE L EF C+R+ ++L++ DIDHFK +NDT Sbjct: 144 LEKANEELACLSRTDRLTQLNNRGFWEECLGGEFARCKRYGTVSSLIMFDIDHFKKVNDT 203 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 +GH GDE I +++ L TLR +D+ GR+GG+EF VI++ T AE A R+ Sbjct: 204 YGHQAGDEVIRTVSQLLTKTLRDTDIAGRYGGEEFGVILTDTSAEKARVFADRLRRLNEA 263 Query: 319 LRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + + + IS+G+A +P M + +W+++AD ALY +K+ GRNR VA Sbjct: 264 VTVRHEDVAIRFTISLGIAQFDPAMERHSQWIEAADKALYLSKQGGRNRVTVA 316 >UniRef50_B8FHG3 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Proteobacteria RepID=B8FHG3_DESAA Length = 319 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 5/206 (2%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 + E I + + +T +L L +++ DG+T + NRR + + Sbjct: 93 EAKGFELGAVDYITKPFRPVIVKARIKTHIQLKRKSDLLDRLASIDGLTEIPNRRSFNAV 152 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIG 286 L E R +L+++DID FK ND +GH GD + + + + L R SD+ Sbjct: 153 LEREIRRAYRSGSSISLILLDIDLFKKYNDYYGHAAGDTCLRRVAKSIDRILNRASDIAA 212 Query: 287 RFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNPQMS 343 R+GG+EF VI+ T E A+ + E + +L + + + +S+G A L P + Sbjct: 213 RYGGEEFGVILPDTDLEGALHVAETIREAVASLNIEHAASSVADMVSVSLGAASLQPDVK 272 Query: 344 H-YREWLKSADLALYKAKKAGRNRTE 368 + + +AD ALY+AK +GRN+ Sbjct: 273 TAPLDLINAADAALYQAKDSGRNKVC 298 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 2/171 (1%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + + L+ S +D +TG+YNRR+ E L+ E + +R L++ID+DHFK ND +G Sbjct: 946 QLRESLESQSIKDSLTGLYNRRYMEESLKREINLAQRKQHPVGLIMIDVDHFKQFNDNFG 1005 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H GD + + L +R D+ R+GG+EF +I+ + ++ +G+ L Sbjct: 1006 HKAGDLILHEVGNFLMANVRSGDIACRYGGEEFLLILPEASLSDSQQRAEQIRKGIKQLN 1065 Query: 321 LPNTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 +L +S+GVA ++SAD+ALY+AK GR+R V Sbjct: 1066 FQQYNSAFTSLTVSIGVACFPAHGKQGETLIQSADMALYQAKNQGRDRVVV 1116 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 2/255 (0%) Query: 116 MGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWW 175 +G + A ++ A R G + L+ L V L Sbjct: 135 VGDCLCGRAARGELIITPRCQAKASRHIAPGPMPEHGHLLLPLYAKERVVGVFFYYLPPD 194 Query: 176 LSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNC 235 L+L + A A ++ +S D +TG++N + +L E Sbjct: 195 LTLTKAELETFQTVSYQLGLAIDNARLYETVRRLSIYDPLTGLFNHGQFYNLLAEELSRH 254 Query: 236 RRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAV 295 +R R +LL++DIDHFK +NDT+GH GD + L+ L+ R D + R+GG+E A+ Sbjct: 255 QRTGRPLSLLMLDIDHFKKVNDTYGHRAGDAVLQQLSGLLKKQARAIDRVCRYGGEELAL 314 Query: 296 IMSGTPAESAITAMLRVHEGLNTLRLP--NTPQVTLRISVGVAPLNPQMSHYREWLKSAD 353 I+ T E+A R+ + ++ + +S+G A + +AD Sbjct: 315 ILPETDREAARQTAERLRRHVEKCCFATCGQQEIGVTVSIGAATCPDAAISAETLVNAAD 374 Query: 354 LALYKAKKAGRNRTE 368 ALY AK+AGRNR Sbjct: 375 RALYAAKRAGRNRVC 389 >UniRef50_A8UUF5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUF5_9AQUI Length = 283 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 4/166 (2%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 R L+ ++ D +TG YNRR E +L E + RR+ ++L ID+D+FK +NDT+GH Sbjct: 121 RELRFLADTDSLTGFYNRRKIEEILAKEIERSRRYGNPLSVLFIDVDNFKELNDTYGHKS 180 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 GDE + + ++ LR +D +GRFGG+EF VI+ T ++SA+ R+ + + Sbjct: 181 GDEVLRKIAEIIKSELRRTDYVGRFGGEEFMVILPETDSQSALRVAERIRKRVEREDFKT 240 Query: 324 TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + +SVGV L + D A+Y AK+ G+NR+E+ Sbjct: 241 G---KVTVSVGVTELK-EGDDLNTLFNRVDRAMYLAKERGKNRSEL 282 >UniRef50_C6NZP2 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZP2_9PROT Length = 570 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 75/366 (20%), Positives = 140/366 (38%), Gaps = 20/366 (5%) Query: 23 PLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHP-----PPGWWWLVLVGWA 77 L +RS L ++ + A +A HP +V Sbjct: 206 FLLVVGTRERSYLYYSLALSSILFCNFAYTGHGVAWLWPEHPGFQKFVILVSMVVYNVLG 265 Query: 78 FVWPHLAWQIASRAVDPLSRE-----------IYNLKTDAVLAGMWVGVMGVNVLPSTAM 126 ++ + + L L D+ V + Sbjct: 266 LMFAARFLALKKHSPRTLRGIRWIGTLAVVIMALALMVDSQFVAAMVAFVCTTAFTIGMF 325 Query: 127 LMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPL 186 L+ + L R F+ ++ VT + P + + +VI Sbjct: 326 LLGILSVLRNQTSGRYFLFATFFGMLGVGVTA--LAVWGKIPFRPYTFHAAEFGLVIEAT 383 Query: 187 LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 L + + + ++ D +T + NRR + + RH R +L++ Sbjct: 384 LLALGLSNWMRENRDALYEAEQVARLDALTHLNNRRAFMELALPYASTAGRHERPMSLVM 443 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAI 306 +DIDHFKSIND +GH GD + A+ L+ R SD++ R+GG+EF +++ T + AI Sbjct: 444 MDIDHFKSINDQYGHQTGDLVLTAVADLLKNFSRTSDIVARWGGEEFILLLPETGLKQAI 503 Query: 307 TAMLRVHEGLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 R+ + + R+P ++L S G+A + + + ++ AD+ LY+AK++GRN Sbjct: 504 NHAERLRQAIAEFRIPVGETSISLTASFGIAAHVANL-SFDKMIEQADVQLYEAKRSGRN 562 Query: 366 RTEVAA 371 + ++ Sbjct: 563 KVCCSS 568 >UniRef50_Q0VL34 GAF/PAS/GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VL34_ALCBS Length = 487 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 9/221 (4%) Query: 156 VTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTAT-KLAEHKRRLQVMSTRDG 214 + L +++ N + I I + ++ + +L E + L M+ D Sbjct: 268 IVWVLLAVSLVRNGDGSPRYFLSQIEDITAQVTAELTLREKQGELEELNQELASMARTDP 327 Query: 215 MTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQ 274 +TG+YNR LR EF C R + +++ +D+DHFK ND++GH GD A+ A+ Sbjct: 328 LTGLYNRLVLMEGLRQEFSRCERRSEPMSVIFMDVDHFKQYNDSYGHVEGDAALQAVAEA 387 Query: 275 LQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVG 334 L+ +R +DV+ R+GG+EF ++ ++ A R + + + + +SVG Sbjct: 388 LRPVIRDTDVLARYGGEEFVALLPTANSQDAERVAERCRRAVAEIS---SLSRPVSLSVG 444 Query: 335 VAPLN-----PQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 VA L + L +AD ALY AK AGRNR A Sbjct: 445 VATLRFGDEADETKSPESLLSAADRALYVAKGAGRNRVHTA 485 >UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C76_DECAR Length = 548 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 100/178 (56%), Gaps = 2/178 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 T + +++ L+ +S D +T ++NRRH+ ++ ++E + R+ +++++DIDHFK Sbjct: 365 DITPIKHYQKELERLSQFDELTNLFNRRHFFSLAKHELNRSSRYRSKLSVMMLDIDHFKR 424 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 IND GH GD + + +Q+ +LR SD+ GR GG+EFA+++ T E A R+ + Sbjct: 425 INDGHGHKTGDLVLANIGKQIGDSLRDSDIAGRMGGEEFAILLPETDLEQASIMAERLRK 484 Query: 315 GLNT--LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + L + + + +S+G+A + Q L AD ALY AK +GRN+ A Sbjct: 485 QVAETWLDIGDGRTLNCTLSIGLATKSDQQIDLENLLHQADTALYAAKNSGRNKVSCA 542 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 3/190 (1%) Query: 185 PLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 L+ T+ ++ L+ ++T D +TG+ NRR + R E + RH+R ++ Sbjct: 272 RLIGVTGVMVDVTESHRLRQELERLATTDPLTGLSNRRAFLMRAREEVERAVRHDRPMSV 331 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGS-DVIGRFGGDEFAVIMSGTPAE 303 ++ID+DHFKS+ND +GHD+GD + + +Q LR S DV RFGG+EF +++ T Sbjct: 332 VMIDVDHFKSVNDRYGHDIGDLVLQDVAATVQGALRNSGDVAARFGGEEFVLLLPETTVS 391 Query: 304 SAITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSH-YREWLKSADLALYKAKK 361 A R+ + V S GV M LK AD ALY+AK+ Sbjct: 392 GAQQLAERIRVAFERTAVETEQGAVRFTASFGVDVFRSDMDTGIDTVLKRADDALYRAKE 451 Query: 362 AGRNRTEVAA 371 AGRNR ++AA Sbjct: 452 AGRNRVQLAA 461 >UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVY6_CHLT3 Length = 440 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 3/187 (1%) Query: 188 FGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 ++ E L M D T ++N RH++ E +R N +L++I Sbjct: 250 LARTLRHLGKEVEEKTNELNQMVITDEKTKLFNFRHFKQEFLIEVARAKRFNEPLSLIMI 309 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 D+D FK NDT GH +GD+ ++ ++ L+ R +DV RFGG+EFA ++ T A+ A Sbjct: 310 DVDKFKHYNDTNGHMLGDQVLIKVSALLKKECRETDVPARFGGEEFAALLPRTDAKEAFQ 369 Query: 308 AMLRVHEGLNTLRLPN---TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 R+ + T N P L S+GVA + +AD ALY+AK+ GR Sbjct: 370 VAERIRSSIETSEFENQKAQPGGNLTASLGVATFPFDAYDAEALIIAADEALYRAKENGR 429 Query: 365 NRTEVAA 371 NR EV + Sbjct: 430 NRVEVYS 436 >UniRef50_C1XLF8 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLF8_MEIRU Length = 373 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 81/329 (24%), Positives = 129/329 (39%), Gaps = 29/329 (8%) Query: 41 VRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIY 100 L + + + L W + L A ++ Sbjct: 56 QYLLLPMAVGFIALEFHLWRNPQNVRWVWQIALALIAIY-----EIVSLFYEAAYKLHQR 110 Query: 101 NLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL 160 + T A L V +M N+L + LV +V+ L Sbjct: 111 DGITPAALWFPMVYLMAFNLLN----------------RRQALRFSLVYLVLGLLAGAVG 154 Query: 161 TGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYN 220 ++ S N + + L I L ++ L H ++ M+ D +T + N Sbjct: 155 MLMSPSINVSSINTALQFTFSNIAYLALLYMFAY----LRRHYAQMHQMAHTDALTNLTN 210 Query: 221 RRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLR 280 RR + L E D RR+NR LL+ D+DHFK INDT+GH VGD+ + + +L LR Sbjct: 211 RRAMQQKLEGELDRARRYNRPFALLLADLDHFKQINDTYGHSVGDQVLREVAGRLAQHLR 270 Query: 281 GSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNP 340 SD + R+GG+EF ++ T + A R+ + + V + +S+GVA Sbjct: 271 ESDSLARWGGEEFLILAPETDLQQAYLLAQRLLGAIRESPISG---VQVTLSLGVACYR- 326 Query: 341 QMSHYREWLKSADLALYKAKKAGRNRTEV 369 Q L AD A+Y+AK GRN+ + Sbjct: 327 QGDSIAALLSRADEAMYRAKAGGRNQIVL 355 >UniRef50_B2V6Y8 Diguanylate cyclase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V6Y8_SULSY Length = 492 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 5/226 (2%) Query: 147 LVLMVVSCLVTLELTGITVSFNSAPLEWWLS--LPIIVIYPLLFGWVSYQTATKLAEHKR 204 L+ ++ G +S+ + S I++ L + + + K Sbjct: 268 LMTFMLIKSFNNISIGYLISYEADTTFKVFSKSFYIMISSLLFIMIIINIFIINIIKLKN 327 Query: 205 RLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVG 264 + + D +TG++NR +T+++ E + +R+N+ ++L+ DIDHFK INDT+GHD G Sbjct: 328 VAEKKAITDKLTGLFNRSIIDTLIQVEIERAKRNNKPISILLFDIDHFKKINDTYGHDKG 387 Query: 265 DEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT 324 D A+ + + TLR SD + R+GG+EF I+ T + A ++ + + Sbjct: 388 DYALKTIAEIARRTLRKSDYVLRWGGEEFLAILPETDLDGATKVAEKIRSNIENYNFKDI 447 Query: 325 PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + +S+GV L +K AD ALY AK GRNR EV+ Sbjct: 448 G--RVTVSIGVTMLKI-GEPLDNAIKRADEALYAAKNKGRNRVEVS 490 >UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica RepID=A9L0C9_SHEB9 Length = 466 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 15/317 (4%) Query: 60 LVSHPPPGWWWLVLVGWAFVWPHLAW---QIASRAVDPLSREIYNLKTDAVLAGMWVGVM 116 + W W ++ LA + L + Sbjct: 144 VAPMQLKYWLWGFVLIPVLCSLALALFATWGSHWLPI--------LIAKNSYKQLLHSPY 195 Query: 117 GVNVLPSTAMLMIMCLNLM-GAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWW 175 + V A+ ++ + +++ +L + + G S Sbjct: 196 ALLVWGLNALALVCMIRRARSNNVLYTWLSVALLASLIDVTLTLFAGARFSLGWYAARIS 255 Query: 176 LSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNC 235 S+ +V+ L W + L S +D +TG++NRR+ E+ L D+ Sbjct: 256 SSVSSMVLLCALL-WEVNRLYVATQRANESLYQQSVKDTLTGLFNRRYLESQLAIHIDHA 314 Query: 236 RRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFA 294 +RH LL++D+DHFK+ ND GH GD+ +V + +QL+ +L R +D I R+GG+EF Sbjct: 315 KRHKEPLCLLVLDVDHFKAFNDQHGHLAGDDCLVTVAKQLEQSLYRPADFIARYGGEEFI 374 Query: 295 VIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ-VTLRISVGVAPLNPQMSHYREWLKSAD 353 V++ T A+ + R+ ++ ++ Q +++ IS+G A L + L +AD Sbjct: 375 VVLPHTDAKDGMQIAERLRLNVSAEKIEYQGQLLSVTISIGCAVLRHSEETAQSLLIAAD 434 Query: 354 LALYKAKKAGRNRTEVA 370 ALY+AK AGRN +VA Sbjct: 435 SALYQAKAAGRNCVKVA 451 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 2/167 (1%) Query: 204 RRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDV 263 R +++ + DG+T ++NRRH++T LR E D R++ TL+++DID+FK IND +GH Sbjct: 345 REMRLQADHDGLTQLHNRRHFDTRLREELDRHGRYSMPLTLMMLDIDYFKQINDRFGHQA 404 Query: 264 GDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN 323 GD + L L+ T+R +D R+GG+EF I+ T + A R+ + + + + Sbjct: 405 GDAVLRELASVLRETIRTTDYCARYGGEEFVAILPHTDEQQARVLAERLRKNIESRVFRH 464 Query: 324 TP-QVTLRISVGVAPLNPQMSHY-REWLKSADLALYKAKKAGRNRTE 368 + +S+G+ P E ++ AD ALY AK GRN Sbjct: 465 HGKTIQATVSIGLTGFKPGALTPRDELVREADAALYLAKANGRNVVC 511 >UniRef50_B7GIF3 Response regulator with a diguanylate cyclase output domain n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GIF3_ANOFW Length = 421 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 3/182 (1%) Query: 189 GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V + T L E +R + ++T+D +T +NR ++ E +R+ ++++ D Sbjct: 242 YLVVFTDITALEEESKRNEFLATKDPLTKTFNRLKFDEFFTREIHRAKRYKHTFSIILFD 301 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 IDHFK +NDT+GHDVGD +V + + LR D++ R+GG+EF ++ T A Sbjct: 302 IDHFKKVNDTYGHDVGDLVLVRMCEAISNRLRDCDILARWGGEEFIILAPATSQTGAYRL 361 Query: 309 MLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + + T+ P + S GV Q + +K AD ALY+AK+ GRNR Sbjct: 362 AEALRHLVETVHFPTVG--HMTCSFGVCEY-EQGMTKEQMVKRADEALYEAKRTGRNRVV 418 Query: 369 VA 370 V+ Sbjct: 419 VS 420 >UniRef50_C8X007 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X007_DESRD Length = 531 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 3/243 (1%) Query: 131 CLNLMGAGGPRLFVAGLVLMVV--SCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLF 188 L+G +F +VV ++E+ + LE S L Sbjct: 276 VAGLIGMRARDVFAPWYATLVVMEPGSGSVEIRLPYGFKEMSWLEIERSEIRDARGRLWG 335 Query: 189 GWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIID 248 V + ++ E + RL M+ D +TG+YNRR + + R EF+ +R++ T+L++D Sbjct: 336 QLVLMRDVSERKEAESRLLQMAATDELTGLYNRRRFFELARGEFNRAKRYSSPMTILLLD 395 Query: 249 IDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITA 308 ID+FK IND +GHD GD A+ + + LR DV+ R GG+EF ++ T A Sbjct: 396 IDYFKRINDEYGHDAGDTALRCIVSMIASQLRSLDVLARLGGEEFVALLPETHQFDAERI 455 Query: 309 MLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 R+ + + + + + +S+GVA + +M E + AD A+Y+AK+ GRN+ Sbjct: 456 AERIRSEIESTAINLFETTLFVTVSIGVAGYSKEMQDVGELINRADEAMYRAKRDGRNQV 515 Query: 368 EVA 370 +A Sbjct: 516 CLA 518 >UniRef50_Q3A1L9 FOG: GGDEF domain containing protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1L9_PELCD Length = 367 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 5/211 (2%) Query: 165 VSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHW 224 S L ++ + + L + L ++ D +T + NRR + Sbjct: 147 FYMVSTASLVTLDGSPGIVGHFRDITIRKRAEAALEQANTALSHLARVDALTQIPNRRAF 206 Query: 225 ETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSD 283 + L+ E+ R +L++ DID FK ND +GH GD+ + + L R +D Sbjct: 207 DEALQAEWGRLAREEGPLSLVLCDIDCFKKYNDHYGHQAGDKVLRRVAEALADCARRPAD 266 Query: 284 VIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVT---LRISVGVAPLNP 340 + R+GG+EFA+++ TP E A++ + + + L L + L +S+GVA + P Sbjct: 267 LASRYGGEEFALLLPQTPLEGALSVAEKARQAVEDLALQHPTSSVKPILTLSLGVASVIP 326 Query: 341 Q-MSHYREWLKSADLALYKAKKAGRNRTEVA 370 ++SAD ALY+AK A RNR A Sbjct: 327 SLHIAPTTLIESADKALYQAKNADRNRVVPA 357 >UniRef50_Q0G1R3 Periplasmic sensor diguanylate cyclase (GGDEF) n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G1R3_9RHIZ Length = 442 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 85/333 (25%), Positives = 145/333 (43%), Gaps = 16/333 (4%) Query: 43 LPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNL 102 LPR + F A +S P +++ V +A+ PL+ I L Sbjct: 45 LPRGFTIGLAFGFAAVIAMSDPFELGPGVIVDARGIV-----LVLAAPFGGPLAGLISGL 99 Query: 103 KTDA--VLAGMWVGVMGVNVLPSTAMLMIMCLNLMGA--GGPRLFVAGLVLMVVSCLVTL 158 A + G +GV V+ S ++ I+C + GG ++ + L Sbjct: 100 IAGAYRLWIGGAGAYLGVIVVVSAVLIGILCSRFVRKREGGYDPSKLLVLATLGCAQSFL 159 Query: 159 ELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV 218 L + P+ + + +L + R LQ + D +TG+ Sbjct: 160 LLLIPFFAPGVDPMRTLVPHVAANWFGILLLGHFLTGVGRRRHATRILQREAFTDSLTGL 219 Query: 219 YNRRHWETMLRNEFDNCRRHN--RDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ 276 NRR ++ + D R LL+IDIDHFK +ND WGH GD+ + +++ ++ Sbjct: 220 PNRRAFDQSVERLSDLRERGEVPGPVALLLIDIDHFKQVNDQWGHFFGDKVLRSVSTTIR 279 Query: 277 ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVA 336 +R D++ R+GG+E AVI+ T A + R+ + +V + SVGVA Sbjct: 280 RQVRRGDILARYGGEEIAVILPSTQHSDACSVAERIRMAVENGEF----RVKITASVGVA 335 Query: 337 PLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 ++ ++ + + ++AD ALY+AKK GRNR E+ Sbjct: 336 -IDEDINAFCDLFQAADRALYRAKKNGRNRIEL 367 >UniRef50_A3WKT4 GGDEF domain protein n=2 Tax=Alteromonadales RepID=A3WKT4_9GAMM Length = 364 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 80/352 (22%), Positives = 148/352 (42%), Gaps = 10/352 (2%) Query: 23 PLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPH 82 +R + A + F I L P W+ L+ A Sbjct: 4 SAFSALSPKRPQFWQVAKRCCIIAASIDVAFFFIFLIL---NSPILAWVNLLSIAMY--L 58 Query: 83 LAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNL-MGAGGPR 141 A+ + + L+ + L+ A + + + ++ + + + M Sbjct: 59 TAYWAFGQRKNMLAISLIWLEVLYHSALGTLMIGWDSGFHYFLLMFVPAIFVSMSLKPAV 118 Query: 142 LFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAE 201 L + GL + +S L + +A + + + + ++FG+++ K+ Sbjct: 119 LTLLGLWVYYLS-LDLFSWYYPAMQPINATAVVGVHIFNLTVVFIMFGYLALYYLNKVNL 177 Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 +L+ +T D +T + NRRH +L+ N R+ ++L++D+DHFKS+NDT GH Sbjct: 178 THDQLRFYATTDPLTKLRNRRHMSELLKRALQNKHAEQRNVSVLLLDLDHFKSVNDTHGH 237 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 +VGD+ + L+ T+R D + R+GG+EF V + T A R+ + + Sbjct: 238 EVGDKVLRITADILRDTVRDHDKVSRWGGEEFLVFLPRTNLNHAAQVAERIRKAIAKYPW 297 Query: 322 PN--TPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 + L S+GV+ L P +K AD ALY+ K+AGRN E+ + Sbjct: 298 HTVINENIQLTTSIGVSELKPD-DSVNTLVKRADDALYRGKEAGRNWVELES 348 >UniRef50_D1SQW2 Diguanylate cyclase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SQW2_9BURK Length = 407 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 88/376 (23%), Positives = 148/376 (39%), Gaps = 22/376 (5%) Query: 16 AAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVG 75 L QR L A L A ++ P P W L Sbjct: 21 LGSRLLDALLTTEPRQRIRLAMAGLAALLMAC-CITAMHIAVGAGLAQPGPVRIWTALSA 79 Query: 76 WAF--VWPHLAWQIASRAVDPLSRE---IYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIM 130 V+ + I+ R DP +Y + +A + G+ + +LM Sbjct: 80 GGLLVVYALIRSGISQRWSDPSLTLPQIVYAIACNAAAYAIGGQARGIALPILAVILMFG 139 Query: 131 CLNLMGAGGPRLFVAGLVLMVVSCLVTLE------LTGITVSFNSAPLEWWLSLPIIVIY 184 L + + + ++ + +G++V++ L + Sbjct: 140 MFGLSTRQMFGVMLYAMAAFGLATVSVELRDEPGHSSGLSVAYGIMTAVVLLGSTFLTTR 199 Query: 185 PLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATL 244 + LA ++ ++T D +TG+ NRRH ++R E R + + Sbjct: 200 LQATREDLRRQKHDLARALEHIRELATHDELTGLLNRRHMLELMRLEQRRVSRSDFPLVI 259 Query: 245 LIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAES 304 ++D+DHFK++NDT GH GD + A + ++ +R DVI R+GG+EF +++ TP E+ Sbjct: 260 ALLDVDHFKAVNDTHGHAAGDRVLQAFAQAVRRCVRDGDVISRWGGEEFVLMLCNTPPEA 319 Query: 305 AITAMLRVHEGLNTLRLPNT---------PQVTLRISVGVAPLNPQMSHYREWLKSADLA 355 A + RV E + L +P + + +S+G A P+ E L+ AD A Sbjct: 320 ARALLERVREAVAALSVPADRGDGAGASAGHLRITVSIGFALHRPRHP-IEETLERADRA 378 Query: 356 LYKAKKAGRNRTEVAA 371 LY AK GRNRT A Sbjct: 379 LYAAKLGGRNRTVEEA 394 >UniRef50_C1TNC9 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNC9_9BACT Length = 494 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 99/182 (54%), Gaps = 4/182 (2%) Query: 189 GWVSYQTATK-LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLII 247 + + + + + RL+ ++ RD +TG++NRR + +L +E + R+ +++++ Sbjct: 315 MILVLKDKMENIQSYSDRLEYLANRDSLTGLWNRRKMDQILLSETERSSRYGSSLSVVMV 374 Query: 248 DIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAIT 307 DIDHFK++ND +GH+VGD + ++ ++ R D +GR+GG+EF V++ T + A+ Sbjct: 375 DIDHFKNVNDNFGHEVGDTVLSSIAALMKNCTRAGDSVGRWGGEEFLVVLPETDVKGALE 434 Query: 308 AMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 R+ + + + + S GV E++ AD ALY AK+ GRNR Sbjct: 435 YAERMRSAVEDNVFHDD--IRITSSFGVTQYR-SGEPVNEFVARADEALYDAKEKGRNRV 491 Query: 368 EV 369 E+ Sbjct: 492 EI 493 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 2/172 (1%) Query: 201 EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWG 260 + L+ S RD +TG+YNRR+ E E +R + ++++DIDHFK ND+ G Sbjct: 457 RLRESLRQQSIRDPLTGLYNRRYLEESFERELHRAQRSDDPIAVIMLDIDHFKHFNDSHG 516 Query: 261 HDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLR 320 H+ GDE + AL + L +R DV R+GG+EFA++ G + A ++ + + + Sbjct: 517 HEAGDELLRALGQLLSGCIRAEDVACRYGGEEFAMVFPGMTLDQATRWADQLRHTVESTQ 576 Query: 321 LPNTPQV--TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 + + + +S+GVA H + +++AD ALY+AK+ GRNR A Sbjct: 577 FASRGEALEQVSVSLGVAAFPQHGRHLADLIRAADAALYRAKREGRNRVITA 628 >UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSY0_9GAMM Length = 261 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 1/230 (0%) Query: 142 LFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAE 201 L A + V C + L L G + +L I ++ KL Sbjct: 17 LMTAVVSGSTVCCALGLILLGFPIGGKVWNFAVPAALIIPFFVGTPLVHNLIKSNIKLLR 76 Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 +++L+ ++ +D +TG+YNR+++ CR ++ +LL++D+DHFKSIND +GH Sbjct: 77 VQKQLEELANKDALTGLYNRQYFFDHANEWDKRCRENSGHFSLLMLDVDHFKSINDRFGH 136 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 VGD + ++ ++ +R D+ R+GG+EF ++ T A A R+ G+ Sbjct: 137 PVGDRVLQRVSNVIKGFMRQEDMCARYGGEEFICLLPDTNAAGAKAVAERIRLGMEHQAF 196 Query: 322 PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 ++L +S+G ++ + ++ AD ALY+AK GRNR A Sbjct: 197 LKARGLSLSVSIGATTMSAN-DNLETLIERADQALYEAKDGGRNRAVFKA 245 >UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax=Pseudomonas fluorescens RepID=Q3KAB6_PSEPF Length = 559 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 122/291 (41%), Gaps = 4/291 (1%) Query: 83 LAWQIASRAV-DPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPR 141 L+W IA R D + L +L G++ V V A+ + + + + Sbjct: 262 LSWSIAVRQPLDTALQPARLLFYKLLLLGVFAAVAFGLVAYYLALYLSRPIEQLARSAQK 321 Query: 142 LFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAE 201 + E+ + S ++ + Q L Sbjct: 322 VQNNQPGAHFPLRHPVREIAQLGQSIDAMTQSLLAKERELQETNASLEATVAQRTAALTL 381 Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 L ++T DG+TGVYNRR ++ L RR R LL+ID DHFK INDT GH Sbjct: 382 ANAELLNLATHDGLTGVYNRRRFDEKLTEYSLLFRRTGRPFALLLIDADHFKRINDTHGH 441 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA-ITAMLRVHEGLNTLR 320 GD+ + L + +QI++R +D + R+GG+EFAV++ ++ + Sbjct: 442 AAGDDVLRQLAQLIQISIRSTDFVARYGGEEFAVLLPEIAKPDTPDIVAEKIRSAIAEAD 501 Query: 321 LPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 P + +S+GV+ +P + +K AD LYKAK AGRN+ A Sbjct: 502 FPAVGP--VTVSIGVSLADPADNTPTTLVKRADQQLYKAKAAGRNQVACQA 550 >UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SB7_SULDN Length = 487 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 12/262 (4%) Query: 107 VLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVS 166 VL GM + ++ ++ + ++ G G +++ + ++V + + ++ Sbjct: 236 VLPGMIMALLITSIAIYYTSSGLGPFSIFGLKGTTIYLQEFIAILVITTLFFGVLHQEIN 295 Query: 167 FNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWET 226 + A LE + + L E ++L ++++D +T ++NRR + Sbjct: 296 ESKAKLEE---------LNKNLENMVKEKTKSLMEANQKLNNLASKDSLTNIFNRRIIDE 346 Query: 227 MLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIG 286 + E +R+N L++IDIDHFK +ND +GH VGDE I++L + +R SD+ G Sbjct: 347 FISKETIKSKRYNNSLALIMIDIDHFKEVNDKYGHQVGDEVILSLVDIISKNIRESDIFG 406 Query: 287 RFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYR 346 R+GG+EF +++ T A + + + R Q IS+GV+ N Sbjct: 407 RWGGEEFIILLPETNLNQATIVAQNIRKKVQEYRFDKVGQK--TISLGVSEFNSNDDS-T 463 Query: 347 EWLKSADLALYKAKKAGRNRTE 368 ++K D ALYKAK GRNR Sbjct: 464 VFIKRVDDALYKAKATGRNRVV 485 >UniRef50_Q3SFL9 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFL9_THIDA Length = 843 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 96/183 (52%), Gaps = 4/183 (2%) Query: 190 WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDI 249 V + L + L+ ++ D +TGV NRR E + E+ R +++DI Sbjct: 648 LVVERDIDDLKRAQEALEELTLLDPLTGVANRRFLERFVGREWMREARQRLPIAAVMVDI 707 Query: 250 DHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITA 308 DHFK ND +GH GD + +++ L+ L R +D++ R+GG+EF V++ + +A Sbjct: 708 DHFKDYNDHYGHAQGDACLRTVSQTLRGALHRPADILVRYGGEEFIVLLPESDLAAAREI 767 Query: 309 MLRVHEGLNTLRLPNTPQV---TLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 R+ + + L LP+ + IS+GVA + + + L +AD ALY+AKK GRN Sbjct: 768 AERLRQAVEALALPHPTSPIGDRVTISLGVAAVQAHEGEFDQLLIAADAALYRAKKKGRN 827 Query: 366 RTE 368 R E Sbjct: 828 RVE 830 >UniRef50_C6BZS4 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZS4_DESAD Length = 635 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 16/224 (7%) Query: 160 LTGITVSFNSAPLEWWLSLPII--------------VIYPLLFGWVSYQTATKLAEHKRR 205 L + + E W+ LP++ V+ ++ T+ E Sbjct: 406 LIDSAFAGQTTGFEAWVDLPLVGKRFFSVTYHPVDSVVGDGRLVSITAHDITEQKEMLEE 465 Query: 206 LQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGD 265 ++ +++ D +TG +NRRH+ + E D R+ + L+++DIDHFK+INDT+GH VGD Sbjct: 466 VKRLASTDYLTGAHNRRHFMSRAETELDRLTRYGGELYLMMLDIDHFKNINDTYGHSVGD 525 Query: 266 EAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NT 324 + + + TLR SDV GR GG+EFA ++ +SAI R+ E + + + Sbjct: 526 VVLKEMVKCCIETLRTSDVFGRLGGEEFAALLVHGSIDSAIQVAERLREAIEDMEVRIGR 585 Query: 325 PQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 V L +S+G+ + LK AD LY+AK+ GRNR Sbjct: 586 HVVKLTVSIGLTMVCAD-EDIEIALKHADKCLYQAKEQGRNRVV 628 >UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ09_DESAC Length = 521 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 7/208 (3%) Query: 168 NSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETM 227 ++ + + +I L + KL +++L +S RD +TG+YNRR + Sbjct: 316 QYKTQSSFVLVAMAIIVLLTCYLFVSR--RKLYLAQQKLMRISERDPLTGLYNRRKFMNY 373 Query: 228 LRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIG 286 E+ +R +L+IDIDHFK ND +GH GD A+ A+ ++ + R D Sbjct: 374 YEKEWKAAQRSKTPLAVLMIDIDHFKDYNDHYGHLAGDVALTAVAGAIETRITRPRDCTA 433 Query: 287 RFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQV---TLRISVGVAPLNPQMS 343 R+GG+EF ++ T +A ++ + L++ + + +S+G+ L Sbjct: 434 RYGGEEFIGLLPETDDLAAAQVAEKIRIQVEKLQVQHAYSATADHITVSIGITSLQEGDK 493 Query: 344 -HYREWLKSADLALYKAKKAGRNRTEVA 370 + E + AD ALY+AK+AGRN ++A Sbjct: 494 INRMELINLADKALYEAKEAGRNCVKIA 521 >UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZW4_HYPNA Length = 455 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 4/177 (2%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 L + R +S D +TG++NRR+ L R N+ +L++ DIDHFK++NDT Sbjct: 279 LRQRVDRGLELSVIDQLTGLHNRRYMNGQLEQFMQRAARGNQPLSLMMTDIDHFKAVNDT 338 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 GH GD+ + + ++L+ +R +DV+ R GG+EF V+M TP + A A R+ + + Sbjct: 339 HGHQAGDDVLREIGKRLRANVRPTDVVCRTGGEEFVVLMPNTPGDLACAAAERIRKAVAA 398 Query: 319 LRLP---NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE-VAA 371 P + + + +S GV+ L + + AD ALY+AK GRNR E +AA Sbjct: 399 EEFPVLGGSQNLRITVSAGVSTLQGAGDTTDDLMHRADTALYQAKTGGRNRVESIAA 455 >UniRef50_Q1AX52 Diguanylate cyclase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AX52_RUBXD Length = 378 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 87/354 (24%), Positives = 140/354 (39%), Gaps = 24/354 (6%) Query: 21 EPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWW---WLVLVGWA 77 PP+ R G F R A L S P W + A Sbjct: 44 LPPIPLLWATARPGELFLRVGLPVLAAFCLWCM----WALWSRRVPLWRLERAVFAAISA 99 Query: 78 FVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGA 137 FV LA++I + D + +L ++ + + A Sbjct: 100 FVLGQLAFRIFA---------GTGWNMDQAS----LTETTYPMLAILCIIAQLIFDTQTA 146 Query: 138 GGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTAT 197 L + G +V +E +G ++ + S + + L++ ++ Sbjct: 147 LRLSLGLFGTATALVGAGALVEESGHRITLDQTAWIAQQSAFLAAVIALVYATSYVKSQL 206 Query: 198 KLAE-HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 + ++ D +TG+ NRR LR E + RR+ + ++++ D+D FK +N Sbjct: 207 ARQRTLAEAMHRLAHTDPLTGISNRRSLYAALRREMEAARRYGKPLSVILFDLDRFKLLN 266 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGL 316 DT+GH+ GD A+ + + LR SD +GR+GG+EF V+ T + A R+ E + Sbjct: 267 DTYGHNQGDAALRRVAHTARAALRASDHLGRWGGEEFIVLAPETDLDQARHLAERLREAI 326 Query: 317 NTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVA 370 R P P L S GVA P + L+ AD LY+AK GRNR E A Sbjct: 327 ALDRPPGRPP--LTASFGVASCRPD-DSPEDLLRRADEGLYRAKAGGRNRAETA 377 >UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FZW1_SORC5 Length = 299 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 1/171 (0%) Query: 200 AEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTW 259 A++ + M+ DG+T ++N+R+ L E RRH RD +L+ DIDHFK IND Sbjct: 129 AQYHEEIYRMTIIDGLTQIHNKRYLYEALEREIIRGRRHERDLAILLFDIDHFKRINDVH 188 Query: 260 GHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTL 319 GH GD + + R +Q +R +V R+GG+EFA+I+ T E A + + + Sbjct: 189 GHLAGDFVLKEVARIVQSRIRRDEVFARYGGEEFAIILPETSIEGAAALGETLRQKVAEH 248 Query: 320 RL-PNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + + ISVGVA L + +K AD LY AK +GRNR Sbjct: 249 LFVFQADSIRVTISVGVALLQEGDRTANDLIKRADERLYHAKNSGRNRVCA 299 >UniRef50_Q2BML0 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BML0_9GAMM Length = 577 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 87/363 (23%), Positives = 152/363 (41%), Gaps = 35/363 (9%) Query: 35 LRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWW---------------LVLVGWAFV 79 L R L L + + W W + + Sbjct: 213 LSLKSRRYL--FYSLYLATFIALNLGYTGHGYQWLWPDQPKFQNTIIPLLMIAYALGGML 270 Query: 80 WPHLAWQIASRAVDPLSREIYNLKTDAVLA-------------GMWVGVMGVNVLPSTAM 126 + + ++ SR P +NL +L ++ +G+ + Sbjct: 271 FARVFLELPSRF--PRLNLSFNLLGGVLLFCGILFLLLDDVLSLLYTAFIGIVPFALLMI 328 Query: 127 LMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPL 186 + C L G R F+ V ++S ++T V + + + +++ L Sbjct: 329 IAGACACLNGVKEARYFLGAAVFAMISAVITAFTVSGIVEYKAIGFH-AVEYGMLIEAVL 387 Query: 187 LFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLI 246 ++YQ E Q ++ RD +TG+YNRR ++ ++ F N RH+R+ LL+ Sbjct: 388 FALALAYQFRINQEEKVAA-QQLADRDQLTGLYNRRGFDKVMEPVFGNAYRHHRELCLLV 446 Query: 247 IDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAI 306 +DIDHFK+IND GH GD + L + LQ LR D+I R+GG+EF +++ T A+ Sbjct: 447 LDIDHFKAINDRHGHGYGDLVLTDLAKVLQHELRAGDLIARWGGEEFLLLLPETNHMEAV 506 Query: 307 TAMLRVHEGLNTLRLPNTP-QVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365 T R+ ++ + Q +S+G+A L P + +++ L AD LY+AK+ GRN Sbjct: 507 TLAERLIRNISNREVEGDGVQEHYTVSIGIAELKPPIVSFKQLLVEADKHLYRAKETGRN 566 Query: 366 RTE 368 + Sbjct: 567 KAC 569 >UniRef50_Q1N3P2 Probable two-component response regulator n=1 Tax=Bermanella marisrubri RepID=Q1N3P2_9GAMM Length = 364 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 77/345 (22%), Positives = 144/345 (41%), Gaps = 46/345 (13%) Query: 73 LVGWAFVWPHLAWQIASRAVDP--------------LSREIYNLKTDAVLAG---MWVGV 115 ++ +AF+WP LAW + P + R + + T A W Sbjct: 11 VLIYAFMWPMLAWGMEFNDRAPTFSYTFSTLFIVTSILRLAHGILTQPFYAANPNAWRMT 70 Query: 116 MGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWW 175 M V + L ++ + ++ R + L+VV L + + Sbjct: 71 MYVLAFIHSCTLALLFILVLIIPEYRDLAMAVALIVVGLLSGASASLSPKPIFTQFYIGS 130 Query: 176 LSLPIIVIYPLLFGWV--------------------------SYQTATKLAEHKRRLQVM 209 L+ P ++ L+ + ++ +L E++ +L+ + Sbjct: 131 LAFPATLVSFLVEEFRFLSPLFAATWIYFIFLGRRFYNEYQRAFHIEMRLKENQVKLERL 190 Query: 210 STRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIV 269 + D +TG+YNR++++ L ++D R ++L +D+DHFK IND +GH GD+ + Sbjct: 191 NETDTLTGIYNRQYFDNALDMQWDLASRSENSLSILFLDLDHFKKINDNFGHLAGDQVLC 250 Query: 270 ALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL-PNTPQV 327 R +D+I R+GG+EFA+I+ T + A+ ++ + + + Sbjct: 251 HAAHLFSEIARRKTDMIARYGGEEFAIILPATEKQDALDLAEQIRHAIENTPCRSDQGLI 310 Query: 328 TLRISVGV-APLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA 371 L +S+GV + + +L AD ALY+AK GRN+ AA Sbjct: 311 HLTVSIGVNSVVPSPQGSPVTFLDQADQALYQAKNNGRNQIMFAA 355 >UniRef50_D1U6K0 Diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U6K0_9DELT Length = 457 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 3/223 (1%) Query: 150 MVVSCLVTLELTGITVSFNSAPLEWWLSLPII--VIYPLLFGWVSYQTATKLAEHKRRLQ 207 ++ + T ++ + ++ LS+ ++ F Q T+ + ++ L Sbjct: 85 VLAGAIDTYQMEKRYFHRDGHIIDVLLSVSLVKESDGTPQFFISQIQDITRRKQAEQELL 144 Query: 208 VMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEA 267 ++S +D +T V NRR + E +R + +LIIDIDHFK+IND GHDVGDE Sbjct: 145 LVSQQDPLTKVANRRFFMEHATRELTRGKRFHEPQAILIIDIDHFKTINDKHGHDVGDEV 204 Query: 268 IVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLP-NTPQ 326 + A+ LR DV GR GG+EFA ++ T A RV E + L + + Sbjct: 205 LKAMATACSKALREVDVFGRIGGEEFAAMLLNTNDSVARIVAERVRESVERLSVNVGGKE 264 Query: 327 VTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEV 369 + IS+G+ + + +K AD ALY+AK++GRNR EV Sbjct: 265 IPFTISIGLVSFLGGSNTLDDRMKMADKALYRAKESGRNRVEV 307 >UniRef50_B8DIR5 Diguanylate cyclase with extracellular sensor n=2 Tax=Desulfovibrio RepID=B8DIR5_DESVM Length = 474 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 4/200 (2%) Query: 170 APLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLR 229 ++WL + + LL G V + +L L+ ++ D +T + NR + R Sbjct: 278 TSADYWLVARVAGFFALLVGVVLW-YNRRLKRMNAVLERLARTDPLTDLPNRSRLNELFR 336 Query: 230 NEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFG 289 E + +R+ R +++I+DIDHFK +ND GH GD + ++ ++RG+D +GR+G Sbjct: 337 REVERAQRYRRPFSIVILDIDHFKRVNDELGHLAGDRTLQVFAGVVRDSVRGTDTVGRWG 396 Query: 290 GDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWL 349 G+EF V+ T AE A+ R+ L + +S GVA + L Sbjct: 397 GEEFLVLCPETTAEEAVQLAERLRGSLRATQFEGGRIH--TLSAGVAAFR-EGDSVDTLL 453 Query: 350 KSADLALYKAKKAGRNRTEV 369 AD ALY+AK GR+R EV Sbjct: 454 HRADTALYRAKNGGRDRVEV 473 >UniRef50_D1TF13 Response regulator receiver protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TF13_9BURK Length = 531 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 7/240 (2%) Query: 138 GGPRLFVAG-LVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTA 196 G R+F + + + + + + ++ W+ Sbjct: 274 GVRRIFTYAHVPGTPLIVAIAPAVDDVLAPWQRRSHVAAALTIAFGAVFVVVSWLLAFAL 333 Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 + L +++ D +TG+ NRR + L +E+ RR NR ++L IDIDHFK N Sbjct: 334 RDKQRAQAALLRLASTDPLTGLSNRRVLDKRLDDEWMRARRDNRPLSVLFIDIDHFKRFN 393 Query: 257 DTWGHDVGDEAIVALTRQLQITLRGS-DVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 DT+GH+ GDE +VA+ + R S D++ R+GG+EFAV++ T A+ A ++ Sbjct: 394 DTYGHESGDEVLVAVADCIASVARRSVDLVARYGGEEFAVVLPDTTAQGAFAVAEQIRRK 453 Query: 316 LNTLRL--PNTPQVTLRISVGVAPLNPQMSHYR---EWLKSADLALYKAKKAGRNRTEVA 370 + + + + + +SVG A P + + E L +AD LY AK GRNRT A Sbjct: 454 VESRVIVRGHEAPQAVTVSVGCATARPSTADFANGLELLAAADAQLYVAKNEGRNRTRSA 513 >UniRef50_UPI0000384142 COG2199: FOG: GGDEF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384142 Length = 445 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 1/186 (0%) Query: 186 LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL 245 L + T+ + L ++++D +TG+ NRRH+ E R +L Sbjct: 259 LTHFVALKEDVTETKRLQEELTRLASQDSLTGIANRRHFLERAHTEIIRAGRAKTPLAVL 318 Query: 246 IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA 305 ++D+DHFK IND +GH GD A+ AL + TLR +D+ GR GG+EF ++ G +A Sbjct: 319 MLDVDHFKKINDEYGHAAGDAALKALADTCRSTLRETDLFGRLGGEEFGILFPGDDLNAA 378 Query: 306 ITAMLRVHEGLNTLRLP-NTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGR 364 A R+ + ++ + + S+G++ L L AD ALY AK+AGR Sbjct: 379 TEAAERLRLAIAATKITIGGATIAITASLGLSLLQDGEKSIDAALSRADQALYVAKQAGR 438 Query: 365 NRTEVA 370 NR E++ Sbjct: 439 NRLEIS 444 >UniRef50_Q2BLA2 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLA2_9GAMM Length = 811 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 60/174 (34%), Positives = 99/174 (56%), Gaps = 3/174 (1%) Query: 195 TATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKS 254 + + + L ++T D +T + NRR + T L E +R++R+ +L ++D+DHFK Sbjct: 626 LLIEEQQTEANLHRLATTDELTSLANRRKFLTTLEAELARAKRYHRELSLCMLDLDHFKR 685 Query: 255 INDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHE 314 IND GH GD +V + + ++ LR SD+ GR GG+EFA+++ T + A+ R+ E Sbjct: 686 INDDNGHSAGDSVLVEVAKIMEAMLRESDMAGRIGGEEFAILLPDTSEDDALILAERLRE 745 Query: 315 GLNTLRLP-NTPQVTLRISVGVAPLN--PQMSHYREWLKSADLALYKAKKAGRN 365 + +L + + L S+GVA LN P++ E L +AD +Y AK+ GRN Sbjct: 746 AIESLEIKYQAHTLKLTTSIGVASLNQMPEIVQASELLSAADDCMYYAKQNGRN 799 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 10/284 (3%) Query: 94 PLSREIYNL-KTDAVLAGMWVGVMGVNVLPS-----TAMLMIMCLNLMGAGGPRLFVAGL 147 P + L A + + V G+ + + + + C +G +LF+ Sbjct: 325 PQKALLLALCSFLAAIVYFIITVSGLYIFTNSRVAFVFICSLSCAFSLGYAVMKLFILQR 384 Query: 148 VLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQ-TATKLAEHKRRL 206 V + + + + L S+ + + Q T +L E R L Sbjct: 385 DEQVTTQQTLIAKSAAQDALLHERLSLQESVRQELETQVDERTFELQVTLRELEEKNREL 444 Query: 207 QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDE 266 + ++ D +TG+ NRR ++ L E RR +++++DID FK INDT+GH GD+ Sbjct: 445 EQLNMEDPLTGIKNRRFFDKKLVMELRRSRREQTPLSVIMLDIDKFKVINDTYGHLTGDQ 504 Query: 267 AIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTP 325 I ++ L R D + R+GG+EF V++ T + AI ++ + T + Sbjct: 505 VIRTAADTIKKQLQRPLDEVARYGGEEFVVLLPNTQNDGAIAIAEKIRHAIATNNVHVAG 564 Query: 326 -QVTLRISVGV-APLNPQMSHYREWLKSADLALYKAKKAGRNRT 367 ++ IS GV + +++ + + AD ALY AK+ GRN+ Sbjct: 565 TTISFTISAGVYTSVAEDINNPEIFTERADKALYFAKQHGRNQV 608 >UniRef50_B9MBS6 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Comamonadaceae RepID=B9MBS6_DIAST Length = 890 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 8/198 (4%) Query: 178 LPIIVIYPLLFG---WVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDN 234 L + I L FG ++ T+ L+ ++ DG+TG+ NRR + L+ E+ Sbjct: 688 LHTMTIGGLAFGDHCMATFVDVTEQRAQHELLRKLAFMDGLTGLANRRQLDRTLKAEWRR 747 Query: 235 CRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEF 293 CRR + +++++DIDHFK ND +GH GD+ + A+ L+ L R D++ R+GG+EF Sbjct: 748 CRRSGQPLSVVMVDIDHFKQFNDLYGHQQGDDCLRAVAAALRGGLGRSHDLVARYGGEEF 807 Query: 294 AVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQ---VTLRISVGVAPLNPQM-SHYREWL 349 ++ + A + ++ ++ + + +S GVA + P + L Sbjct: 808 VCLLPECDLDGARAKAQALCRAVHARQMEHRGSPIAPVVTVSAGVACVVPGAEDTPEQLL 867 Query: 350 KSADLALYKAKKAGRNRT 367 AD LY+AK AGRNR Sbjct: 868 ARADANLYRAKAAGRNRV 885 >UniRef50_Q2W5X6 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W5X6_MAGSA Length = 317 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 3/170 (1%) Query: 199 LAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDT 258 LA L+ S D +TG++NRR + +E D +R+ +L+I D+DHFKS+ND Sbjct: 150 LALKSVELEKASITDALTGLFNRRRLDESFAHELDRAQRYAEPVSLIISDVDHFKSVNDI 209 Query: 259 WGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNT 318 GH VGDE + A+ L+ +R DV+GR+GG+EF +I T + A ++ + + Sbjct: 210 HGHHVGDEVLQAMAGLLRHGVRALDVVGRWGGEEFLIICPNTDLDGATALAEKLRAAIAS 269 Query: 319 LRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTE 368 + P + S GVA +++ + AD ALY+AK GRNR E Sbjct: 270 AQFPGIGTSS--ASFGVAQYQ-DGESFKDTVARADTALYRAKVNGRNRIE 316 >UniRef50_Q3JJL8 GGDEF domain protein n=52 Tax=Burkholderia RepID=Q3JJL8_BURP1 Length = 528 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 4/228 (1%) Query: 147 LVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRL 206 L + + V+ + + + + + + I + + + + RL Sbjct: 298 LQGLPIVVNVSPAERHVFMQWRIRAQRLGVLMLVFGIAIVGGTALLARELRWRRHAEMRL 357 Query: 207 QVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDE 266 Q ++ D +TG+ NRR ++ LR+E+ R R +LL +DID FK ND +GH GD+ Sbjct: 358 QRLARTDALTGLGNRRAFDENLRSEWARALRTGRPLSLLFVDIDQFKDYNDHYGHQAGDD 417 Query: 267 AIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPN-- 323 + + L + + R +D + R+GG+EF + + T A+SA + + L + + Sbjct: 418 VLREVGGCLAVNVRRAADDVARYGGEEFVITLPDTDAKSAAAIAEYIRRAVYDLDIEHVR 477 Query: 324 TPQVTLRISVGVAPLNPQMSHYRE-WLKSADLALYKAKKAGRNRTEVA 370 +P + +S+G+ + ++H +K AD ALY+AK GRNR A Sbjct: 478 SPYARVTVSIGLVTSHEHIAHSDATLVKMADAALYQAKSTGRNRVCGA 525 >UniRef50_A9AKV8 Diguanylate cyclase n=24 Tax=Burkholderia RepID=A9AKV8_BURM1 Length = 529 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 5/237 (2%) Query: 138 GGPRLF-VAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTA 196 G RL+ L + + +V + I ++ + ++ ++ + + + Sbjct: 278 GVRRLYAFRHLDNLPLIMMVAESESEIYAAWYDRAIPIGSAMALLALGFVGLSLLLDVQL 337 Query: 197 TKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSIN 256 K + LQ ++ DG+TG+ NRR + L E+ R +LL +D+DHFK N Sbjct: 338 RKRHRAETELQALARTDGLTGLDNRRMLDVTLAREWRRAARSQHALSLLFVDVDHFKRYN 397 Query: 257 DTWGHDVGDEAIVALTRQLQITL-RGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEG 315 D+ GH GD+A+ A+ R + L R +D R+GG+EF VI+ ++ A+ + Sbjct: 398 DSQGHQAGDDALAAVGRCIAGCLRRPADYAARYGGEEFVVILPDIGSDGAVAIAETIRTS 457 Query: 316 LNTLRLPNTPQ--VTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTEV 369 + L + + L S+GVA P LK AD ALY+AK+ GRNR V Sbjct: 458 ILELGIRHDGSAFGCLTASIGVATCRPDRDDDMHAALKLADDALYRAKETGRNRVVV 514 >UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCX8_9BURK Length = 600 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 82/352 (23%), Positives = 140/352 (39%), Gaps = 27/352 (7%) Query: 46 AVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHL----AWQIASRAVDPLSREIYN 101 A + + + + + A HL + A V + ++ Sbjct: 244 AASVGAAAFCLFTRRMLDTATVLPRVHRALQALAAVHLLAPLVYWFAITPVARYATLLFL 303 Query: 102 LKTDAV-LAGMWVGVM----GVNVLPSTAMLMIMCLNLMGAGGPRL-----------FVA 145 L AV G W + G L + ML + L L + Sbjct: 304 LTVLAVTAVGAWCAFLRMRSGYYFLGAFGMLAVGSLVTTARSFGWLPTNAFTVNGFQLGS 363 Query: 146 GLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLL----FGWVSYQTATKLAE 201 L +++++ + + + A E + +V + +L Sbjct: 364 NLEMLLLAFALADRFNQMRREKHMAQRELVSTQQQLVETLRASEQELAQRVEERTRQLQV 423 Query: 202 HKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGH 261 RL+ +S DG+TG+ NRRH++ +L E+ R + L+++D+D FK ND +GH Sbjct: 424 ANERLEALSMVDGLTGIANRRHFDQVLHKEWTRLERAGQPLALVMLDVDWFKRYNDHFGH 483 Query: 262 DVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRL 321 GDE + A+ + + R SD++ R+GG+EF +I GT A+ R + + L + Sbjct: 484 QAGDECLRAVAQAISGVSRASDLVARYGGEEFVIIAPGTDGPQALQMAQRACDAVRALGM 543 Query: 322 PN--TPQVTLRISVGVAPLNPQ-MSHYREWLKSADLALYKAKKAGRNRTEVA 370 P+ + + +S GVA P L AD ALY+AK GRNR +A Sbjct: 544 PHPLAYEAVVTVSCGVAVTVPGPDDSLENLLGQADDALYEAKAQGRNRVVLA 595 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.165 0.555 Lambda K H 0.267 0.0503 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,632,196,671 Number of Sequences: 3077464 Number of extensions: 160932517 Number of successful extensions: 653537 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 23767 Number of HSP's successfully gapped in prelim test: 2655 Number of HSP's that attempted gapping in prelim test: 583998 Number of HSP's gapped (non-prelim): 30761 length of query: 371 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 241 effective length of database: 640,326,036 effective search space: 154318574676 effective search space used: 154318574676 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.8 bits) S2: 94 (40.5 bits)