BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (758 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organism... 908 0.0 UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit ... 781 0.0 UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ... 776 0.0 UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit ... 750 0.0 UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ... 746 0.0 UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n... 718 0.0 UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit C... 717 0.0 UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ... 702 0.0 UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 682 0.0 UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ... 669 0.0 UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Tr... 668 0.0 UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ... 643 0.0 UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=... 635 e-180 UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicoba... 634 e-180 UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ... 629 e-179 UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding s... 616 e-175 UniRef50_C9PUC6 ATP-dependent Clp protease subunit n=1 Tax=Prevo... 584 e-165 UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 580 e-164 UniRef50_D1PH53 ATP-dependent Clp protease, ATP-binding subunit ... 578 e-163 UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular or... 575 e-162 UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ... 567 e-160 UniRef50_C8PIY8 ATP-dependent CLP protease ATP-binding subunit n... 564 e-159 UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 T... 563 e-158 UniRef50_A0RNV1 ATP-dependent Clp protease ATP-binding subunit C... 559 e-157 UniRef50_C9KP02 Negative regulator of genetic competence ClpC/Me... 558 e-157 UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY 554 e-156 UniRef50_C7HWH6 Negative regulator of genetic competence MecB/cl... 553 e-155 UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ... 549 e-154 UniRef50_Q9ZN31 ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT n=17 ... 547 e-154 UniRef50_D1Y107 Negative regulator of genetic competence ClpC/Me... 544 e-153 UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomyceta... 542 e-152 UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogace... 537 e-151 UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacte... 536 e-150 UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Ta... 535 e-150 UniRef50_A7I2C9 ATP-dependent CLP protease ATP-binding subunit n... 533 e-149 UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n... 532 e-149 UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/Dna... 531 e-149 UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit c... 531 e-149 UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bactero... 520 e-145 UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit c... 519 e-145 UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiale... 519 e-145 UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogace... 519 e-145 UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 518 e-145 UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Sacchar... 517 e-145 UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteri... 517 e-145 UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=... 513 e-143 UniRef50_P37571 Negative regulator of genetic competence clpC/me... 513 e-143 UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n... 509 e-142 UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria Rep... 507 e-142 UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit c... 506 e-141 UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=V... 506 e-141 UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subu... 503 e-141 UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/Me... 503 e-140 UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71... 503 e-140 UniRef50_A4W448 ATPases with chaperone activity, ATP-binding sub... 503 e-140 UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Can... 501 e-140 UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subu... 501 e-140 UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,... 499 e-139 UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecali... 498 e-139 UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ... 497 e-139 UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiale... 496 e-139 UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mami... 494 e-138 UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular or... 492 e-137 UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Tr... 491 e-137 UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subu... 488 e-136 UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/Dna... 488 e-136 UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum Rep... 487 e-136 UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR 485 e-135 UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit c... 480 e-134 UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Per... 478 e-133 UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subu... 474 e-132 UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding sub... 474 e-132 UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/Me... 473 e-131 UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax... 471 e-131 UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding ... 470 e-131 UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosipho... 469 e-130 UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular or... 469 e-130 UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bige... 466 e-129 UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD 464 e-129 UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding ... 462 e-128 UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/Me... 458 e-127 UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=C... 456 e-126 UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit c... 455 e-126 UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Rumin... 454 e-126 UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae... 449 e-124 UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma ... 446 e-123 UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus Re... 446 e-123 UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma ... 445 e-123 UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 441 e-122 UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit C... 441 e-122 UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain,... 430 e-118 UniRef50_A5UYN2 ATPase AAA-2 domain protein n=1 Tax=Roseiflexus ... 428 e-118 UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens ... 420 e-115 UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japo... 414 e-114 UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma ... 409 e-112 UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacteri... 406 e-111 UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Ples... 397 e-109 UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malasse... 392 e-107 UniRef50_C2EIG8 ATP-dependent Clp protease n=4 Tax=Lactobacillal... 391 e-107 UniRef50_D1Z247 ATP-dependent Clp protease ATP-binding subunit C... 389 e-106 UniRef50_A3CKB2 ATPase with chaperone activity, ATP-binding subu... 381 e-104 UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1... 374 e-102 UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza s... 372 e-101 UniRef50_B5RQH1 ATP-dependent Clp protease, subunit C n=24 Tax=B... 369 e-100 UniRef50_Q7RAR9 ATP-dependent Clp protease, ATPase subunit-relat... 363 1e-98 UniRef50_Q1WR72 ATP-dependent Clp protease n=2 Tax=Lactobacillus... 360 8e-98 UniRef50_C3RJA5 ATPase n=3 Tax=Bacteria RepID=C3RJA5_9MOLU 358 4e-97 UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two... 354 6e-96 UniRef50_C0SQM4 Putative ATP-dependent Clp protease n=1 Tax=Lact... 350 1e-94 UniRef50_Q0SNE4 ATP-dependent Clp protease, subunit A n=22 Tax=B... 340 1e-91 UniRef50_B5RLQ8 ATP-dependent Clp protease, subunit A n=1 Tax=Bo... 333 2e-89 UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepI... 313 2e-83 UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga... 311 4e-83 UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HL... 307 1e-81 UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA 305 5e-81 UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular orga... 299 3e-79 UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, s... 296 3e-78 UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organis... 295 4e-78 UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organis... 294 7e-78 UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit c... 293 2e-77 UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collins... 292 3e-77 UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms... 291 7e-77 UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococc... 289 3e-76 UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CL... 289 3e-76 UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organ... 288 7e-76 UniRef50_P33416 Heat shock protein 78, mitochondrial n=49 Tax=Di... 285 5e-75 UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales Re... 285 7e-75 UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=C... 283 2e-74 UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms Rep... 282 3e-74 UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidob... 281 5e-74 UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organis... 281 5e-74 UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 ... 280 1e-73 UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit c... 280 1e-73 UniRef50_UPI00016B2080 clp protease ATP binding subunit n=4 Tax=... 280 2e-73 UniRef50_B3QUJ2 ATPase AAA-2 domain protein n=1 Tax=Chloroherpet... 279 2e-73 UniRef50_Q7YN63 Clp protease ATP-binding subunit n=5 Tax=Apicomp... 279 2e-73 UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular org... 279 4e-73 UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria R... 278 4e-73 UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subu... 278 5e-73 UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 T... 278 5e-73 UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 ... 277 9e-73 UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=... 276 1e-72 UniRef50_C4R0B7 Oligomeric mitochondrial matrix chaperone n=48 T... 276 1e-72 UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 Rep... 275 4e-72 UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit C... 275 6e-72 UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatro... 275 6e-72 UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellu... 274 9e-72 UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria Rep... 273 2e-71 UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=P... 273 2e-71 UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organism... 272 3e-71 UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candida... 272 3e-71 UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. S... 272 4e-71 UniRef50_Q4FY62 Serine peptidase, putative n=12 Tax=cellular org... 272 4e-71 UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 272 4e-71 UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit c... 272 4e-71 UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ... 271 8e-71 UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=C... 271 1e-70 UniRef50_B9Y438 Putative uncharacterized protein n=1 Tax=Holdema... 270 2e-70 UniRef50_B3EPU4 ATPase AAA-2 domain protein n=4 Tax=Chlorobiacea... 269 3e-70 UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces svic... 268 6e-70 UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi... 268 6e-70 UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/me... 266 2e-69 UniRef50_B5ZBN7 Chaperone protein ClpB n=44 Tax=cellular organis... 266 2e-69 UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q... 266 2e-69 UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 T... 265 5e-69 UniRef50_Q03X61 ATP-binding subunit of Clp protease and DnaK/Dna... 265 6e-69 UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mut... 264 8e-69 UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atr... 263 2e-68 UniRef50_A6NVT1 Putative uncharacterized protein n=1 Tax=Bactero... 263 2e-68 UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=... 263 2e-68 UniRef50_C6HIF6 Heat shock protein n=1 Tax=Ajellomyces capsulatu... 263 3e-68 UniRef50_Q46HG6 ATPase n=17 Tax=Cyanobacteria RepID=Q46HG6_PROMT 262 3e-68 UniRef50_Q9MTD7 Clp n=136 Tax=Apicomplexa RepID=Q9MTD7_TOXGO 262 4e-68 UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostr... 261 5e-68 UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteo... 261 1e-67 UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/Me... 260 1e-67 UniRef50_B7FUC8 Predicted protein n=1 Tax=Phaeodactylum tricornu... 260 1e-67 UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter ... 260 1e-67 UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCM... 259 3e-67 UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides ... 259 3e-67 UniRef50_Q8EW28 Chaperone protein clpB n=2 Tax=Bacteria RepID=CL... 259 3e-67 UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba d... 259 3e-67 UniRef50_B0SCX5 Endopeptidase Clp, ATP-dependent proteolytic sub... 258 4e-67 UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus ... 258 4e-67 UniRef50_Q7NHQ2 ATP-dependent protease ATP-binding subunit n=1 T... 258 7e-67 UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI 257 1e-66 UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii... 256 2e-66 UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterob... 256 2e-66 UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conex... 256 3e-66 UniRef50_Q4AAM9 ATP-dependent protease binding protein n=7 Tax=M... 255 4e-66 UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas Re... 255 6e-66 UniRef50_C7RF24 ATPase AAA-2 domain protein n=1 Tax=Anaerococcus... 254 7e-66 UniRef50_Q83FI1 Chaperone protein clpB n=13 Tax=Bacteria RepID=C... 254 9e-66 UniRef50_UPI000194EB59 PREDICTED: hypothetical protein, partial ... 253 2e-65 UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=... 253 2e-65 UniRef50_A6V7C9 Type VI secretion ATPase, ClpV1 family n=10 Tax=... 251 7e-65 UniRef50_A9FG71 ATPase with chaperone activity, two ATP-binding ... 251 8e-65 UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Pro... 250 2e-64 UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 R... 249 4e-64 UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=G... 248 5e-64 UniRef50_Q7NAZ3 Chaperone protein clpB n=5 Tax=Mollicutes RepID=... 248 7e-64 UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=... 247 1e-63 UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subu... 247 1e-63 UniRef50_UPI00016C3DF7 ATPase with chaperone activity, ATP-bindi... 247 1e-63 UniRef50_Q1D2Y8 ClpA/B family protein n=1 Tax=Myxococcus xanthus... 245 5e-63 UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organ... 244 9e-63 UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q... 244 1e-62 UniRef50_A8JF08 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax... 243 2e-62 UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding sub... 242 3e-62 UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=... 242 5e-62 UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B... 241 6e-62 UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp... 241 6e-62 UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=S... 241 7e-62 UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escheri... 241 8e-62 UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria... 240 1e-61 UniRef50_Q6KHS7 ATP-dependent Clp protease, ATPase subunit n=3 T... 240 1e-61 UniRef50_B5FRR8 Chaperone protein clpB n=19 Tax=Gammaproteobacte... 240 2e-61 UniRef50_Q25823 Clp (C?) protein n=14 Tax=Haemosporida RepID=Q25... 240 2e-61 UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium... 239 4e-61 UniRef50_B6EJ73 Chaperone ClpB n=1 Tax=Aliivibrio salmonicida LF... 238 7e-61 UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=... 236 2e-60 UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria ... 235 4e-60 UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_E... 235 4e-60 UniRef50_B5FD85 Type VI secretion ATPase, ClpV1 family n=2 Tax=V... 235 4e-60 UniRef50_Q8IM28 ATP-dependent CLP protease, putative n=6 Tax=cel... 235 5e-60 UniRef50_UPI000187E1EB hypothetical protein MPER_11665 n=1 Tax=M... 235 5e-60 UniRef50_B3LAU4 ATP-dependent Clp protease, putative n=1 Tax=Pla... 234 8e-60 UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F... 234 8e-60 UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ... 234 9e-60 UniRef50_C9XYK6 Chaperone protein clpB n=1 Tax=Cronobacter turic... 234 1e-59 UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomo... 233 2e-59 UniRef50_C5ZYU5 ATP-dependent Clp protease subunit n=2 Tax=Prote... 233 3e-59 UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding sub... 233 3e-59 UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n... 232 3e-59 UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmod... 231 6e-59 UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 ... 231 6e-59 UniRef50_B8NZA1 Predicted protein (Fragment) n=1 Tax=Postia plac... 231 6e-59 UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN 231 8e-59 UniRef50_A8RF26 Putative uncharacterized protein n=1 Tax=Eubacte... 231 1e-58 UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M... 230 2e-58 UniRef50_A5K1F9 ATP-dependent Clp protease, putative n=1 Tax=Pla... 229 2e-58 UniRef50_A3K6L5 ATP-dependent Clp protease, ATP-binding subunit ... 229 3e-58 UniRef50_B3XE87 Type VI secretion ATPase, ClpV1 family n=1 Tax=E... 229 4e-58 UniRef50_A1ZYY8 ATP-dependent Clp protease, ATP-binding subunit ... 228 8e-58 UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ... 227 1e-57 UniRef50_Q8SQU0 HSP 101 RELATED PROTEIN n=2 Tax=Apansporoblastin... 227 1e-57 UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subu... 227 1e-57 UniRef50_Q8NPQ1 ATPases with chaperone activity, ATP-binding sub... 226 2e-57 UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=... 226 3e-57 UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 223 2e-56 >UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organisms RepID=CLPA_RHOBL Length = 793 Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/722 (60%), Positives = 554/722 (76%), Gaps = 7/722 (0%) Query: 21 RHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQP 80 RHE T+EHLLLAL+ P A ++ACSVDL L++ L FI+ L S E + P Sbjct: 44 RHELATLEHLLLALIDEPDAARVMKACSVDLEDLKKTLTDFIDDDLSTLVTSVEGSEAVP 103 Query: 81 TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISH 140 T +FQRV+QRA HVQSSGR EVTGANVLVAIF+E+ES AAY L++ +++R D VNFI+H Sbjct: 104 TAAFQRVIQRAAIHVQSSGRTEVTGANVLVAIFAERESNAAYFLQEQDMTRYDAVNFIAH 163 Query: 141 GTRKD------EPTQSSD-PGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREK 193 G KD P Q +D P P +E E + + +LN AR G +DPLIGRE Sbjct: 164 GVAKDPSYGESRPVQGADEPQETPKAEAGEAKESALSKYCVDLNIKARKGDVDPLIGREA 223 Query: 194 ELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 E+ERAIQVLCRRRKNNPLLVG+ GVGKTAIAEGLAW+I++ +VPEV++ TI+SLD+G+L Sbjct: 224 EVERAIQVLCRRRKNNPLLVGDPGVGKTAIAEGLAWKIIKKEVPEVLSGATIFSLDMGAL 283 Query: 254 LAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS 313 LAGT+YRGDFE+R KA++K+LE ++ILFIDEIHT+IGAGA SGG +DA+NL+KP L Sbjct: 284 LAGTRYRGDFEERLKAVVKELEDHPDAILFIDEIHTVIGAGATSGGAMDASNLLKPALQG 343 Query: 314 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 GK+R +GSTTY+EF FEKDRAL+RRFQKID+ EPS+ + ++I+ GLKP +E HH++RY Sbjct: 344 GKLRCMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVPDAIKILMGLKPHFEEHHELRY 403 Query: 374 TAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 433 TA A+++AVELA +YINDR LPD AIDVIDEAGA L+ SKRKK + +IE+VVA+I Sbjct: 404 TADAIKSAVELASRYINDRKLPDSAIDVIDEAGAAQHLVSDSKRKKVLGTKEIEAVVAKI 463 Query: 434 ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLF 493 ARIP ++VS+ D +TL++L LK LVFGQDKAIEAL+ +IK+ARAGL KP+G++LF Sbjct: 464 ARIPPRNVSKDDAETLRDLERTLKRLVFGQDKAIEALSASIKLARAGLREPEKPIGNYLF 523 Query: 494 AGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAV 553 GPTGVGKTEV QL+ LG+ELLRFDMSEYME+H VSRLIGAPPGYVGFDQGG+LTD V Sbjct: 524 TGPTGVGKTEVAKQLAATLGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGMLTDGV 583 Query: 554 IKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETE 613 +HPH VLLLDEIEKAHPDV+NILLQVMD+G LTD+NGR DFRNV+L+MT+N G + Sbjct: 584 DQHPHCVLLLDEIEKAHPDVYNILLQVMDHGKLTDHNGRAVDFRNVILIMTSNVGAADMA 643 Query: 614 RKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL 673 +++IG + + + +++ FTPEFRNRLD +I F L ++I QVV+KF+++L+ QL Sbjct: 644 KEAIGFGRERRTGEDTAAVERTFTPEFRNRLDAVISFAPLGREIILQVVEKFVLQLEAQL 703 Query: 674 DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 + V +E++ EA WL EKGYD MGARP+ RVIQ+++KKPLA ELLFG L GG V V Sbjct: 704 IDRNVHIELTPEAAAWLGEKGYDDKMGARPLGRVIQEHIKKPLAEELLFGKLTKGGLVKV 763 Query: 734 AL 735 + Sbjct: 764 GV 765 >UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J0Q4_DESDA Length = 832 Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/754 (51%), Positives = 534/754 (70%), Gaps = 22/754 (2%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 ML++ ++ + A A RH+ +TVEH+L AL ++ R LE + LR++LE Sbjct: 1 MLSKSVQSVIRDALMEAHRRRHDMLTVEHVLYALTNSMRGRILLEGSGASVAVLREQLED 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F + V+P + + Q T QRVL+RA+ H++++GR+ V ++L++I E+ES A Sbjct: 61 FFNRELEVVPLAGKHEVAQ-TEGVQRVLERALGHIRAAGRDTVELGDLLISIMDEEESYA 119 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 Y LRK V RLDV+ F+SHG + ++ D G + EE+ + + + +L A Sbjct: 120 HYYLRKQGVERLDVLTFVSHGMDEGGGSRGVDQGGE--GEEKDAKADPLAQYAVDLTARA 177 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G IDPL+GRE EL+RA++VLCRRRKNNPL VG+ GVGKTA+AEGLA RIV+ DVPE+ Sbjct: 178 REGKIDPLVGRENELDRAVEVLCRRRKNNPLFVGDPGVGKTALAEGLALRIVEDDVPEMF 237 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 ++ +++LD+G LLAGT+YRGDFE R KA++++L++ +ILFIDEIHTI+GAG+ SGG Sbjct: 238 SNAKLFALDMGLLLAGTRYRGDFESRLKAVVQRLKELPEAILFIDEIHTIVGAGSTSGGS 297 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+NL+KP+L+SG++R IGSTTY+EF N FEKDRALARRFQ+ID+TEPS EE + I+ G Sbjct: 298 MDASNLLKPVLASGELRCIGSTTYEEFRNHFEKDRALARRFQRIDLTEPSPEECLAILQG 357 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL--------- 411 L+ +Y H VRY+ AV+A V+L +++ DR LPDKAIDV+DE+GA RL Sbjct: 358 LEKRYADFHKVRYSTAAVKAMVDLTARHVRDRLLPDKAIDVMDESGAAVRLGRGVQGARA 417 Query: 412 ----MPVSKRKK---TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD 464 V+ KK V+V D+E +VAR+A IP ++VS ++R+ L +L LK LVFGQD Sbjct: 418 SSGKKAVASGKKLPPLVSVGDVERIVARMAGIPVRTVSGTERNRLASLEKDLKELVFGQD 477 Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEY 524 AIE AI ARAGLG E +P G+FLF GPTGVGKTEV L+K +G+E LR+DMSEY Sbjct: 478 AAIELTVRAILRARAGLGQEQRPAGAFLFYGPTGVGKTEVARSLAKLMGVEFLRYDMSEY 537 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 ME+H VSRLIGAPPGYVGFDQGGLLT+AV K P++V+LLDE+EKAHPD+FN+LLQVMD Sbjct: 538 MEKHAVSRLIGAPPGYVGFDQGGLLTEAVRKAPYSVVLLDEVEKAHPDIFNVLLQVMDYA 597 Query: 585 TLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL---IHQDNSTDAMEEIKKIFTPEFR 641 TLTDN GRK DF +VVL+MT+NAG + R ++G QD + ++ ++ F+PEFR Sbjct: 598 TLTDNTGRKTDFSHVVLIMTSNAGAFDMSRPAMGFGGATRQDAAHKGLKAVENTFSPEFR 657 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 NRLD ++ F L+ D++ ++VDKF+ E+ L+Q+ VSLE+ Q+AR WLA KG+D MGA Sbjct: 658 NRLDALVPFGSLTEDMMLRIVDKFMAEIIESLEQRQVSLELGQKARQWLARKGFDPTMGA 717 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 RP+ R+++ L+ LA+ELLFGSL GG + L Sbjct: 718 RPLRRLLRTELEDRLAHELLFGSLAKGGTARLDL 751 >UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6Q1Y5_NITSB Length = 729 Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/749 (50%), Positives = 532/749 (71%), Gaps = 22/749 (2%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 M++ +L A A+ HRHE++TVEH+ LALL++P + L+ D+ ++++L Sbjct: 1 MISNQLNSIFKEAVKYAKRHRHEYLTVEHVFLALLNSPEGAKILKEAGADIEIMKRKLIQ 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +E LP + R+ T++ RV++ + H+Q++ + E T ++LVA+F E+ S + Sbjct: 61 HLESVLKPLPENVV-REPFETVALSRVIENMIRHIQNAEKKEATVGDLLVALFDEEHSYS 119 Query: 121 AYLLRKHEVSRLDVVNFISHGTR--KDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 YLL++ +S+LD++ +SH + +P++ +D E + FT +L + Sbjct: 120 VYLLKEQGISKLDIMEIVSHQAEVVESKPSKKTDE------------ESYLAKFTIDLLK 167 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A+ G IDP+IGR+KE+ER +Q+LCRR+KNNPLLVGE GVGKTAIAEGLA +I G++P+ Sbjct: 168 EAKEGKIDPVIGRDKEIERVMQILCRRKKNNPLLVGEPGVGKTAIAEGLALKIAAGEIPD 227 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 V+ ++YSLD+G+LLAGTKYRGDFEKR K ++++L+ N+ILFIDEIHTI+GAGA G Sbjct: 228 VLEGASLYSLDMGALLAGTKYRGDFEKRLKGVVEELKSIPNAILFIDEIHTIVGAGATQG 287 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA+N++KP L+SG I+ IG+TTY EF N EKDRAL+RRF K+D+ EP +E T +I+ Sbjct: 288 GSMDASNMLKPALASGAIKCIGATTYAEFRNFLEKDRALSRRFAKVDVKEPDLETTFKIL 347 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK KYE HH VRY A+R+AVEL+ KYINDR LPDKAID+IDE GA L KR+ Sbjct: 348 KGLKDKYEKHHKVRYHINALRSAVELSDKYINDRQLPDKAIDLIDEVGASFHLR--KKRR 405 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V V DIE +A++ +P + V+ D + LKNL ++LK V GQ++A+E L AIK +R Sbjct: 406 SVVTVNDIEDTIAKMVGLPPQRVTSDDLEILKNLEEKLKERVLGQEEAVEQLAMAIKRSR 465 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPP 538 AGL +KP+GSFLF GPTGVGKTE+ +L++ +G+ RFDMSEYME+H VSRLIGAPP Sbjct: 466 AGLNPPNKPIGSFLFVGPTGVGKTELAKELARTMGVHFERFDMSEYMEKHAVSRLIGAPP 525 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GY+G+++GGLLT+ + KHP+ VLLLDEIEKAHPD+ NILLQVMDN TLTDNNG ADF++ Sbjct: 526 GYIGYEEGGLLTETIRKHPYTVLLLDEIEKAHPDLINILLQVMDNATLTDNNGNVADFKH 585 Query: 599 VVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 VVL+MT+N G TE +G Q++ + E +K+ FTPEFRNRLD I+ F LS +++ Sbjct: 586 VVLIMTSNVGA--TEANVMGF-KQESVSKFDEALKQYFTPEFRNRLDAIVRFRPLSQEIV 642 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 +VDKFI EL QLD K ++L ++ +A+ +LA+KGY +GARP+ARVI + +K PL N Sbjct: 643 EGIVDKFIAELNDQLDNKSITLSLTPKAKKYLAQKGYSPELGARPLARVISEEIKTPLTN 702 Query: 719 ELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 E+LFG L GG+V + D++K +L + Q Sbjct: 703 EILFGKLRHGGKVKI--DEKKGKLAFTIQ 729 >UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit n=5 Tax=Campylobacterales RepID=A8EW19_ARCB4 Length = 737 Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/754 (49%), Positives = 522/754 (69%), Gaps = 24/754 (3%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 M+++EL A + A+ +HE++TVEH+ L L+++ + VD L EL++ Sbjct: 1 MISKELRHIFAQAVSYAKSSKHEYLTVEHVFLMLINDQTIENLFIDLGVDTNILFNELKS 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +I++ TP+LP + + T+S + V H QSSG+ ++ VAI +++S + Sbjct: 61 YIDENTPLLPNDANDEPIE-TVSLSSTIDYMVSHTQSSGKTNANVEDMFVAILKDEKSYS 119 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 YLL+K+ + R+D++ ISH KDE Q +D S+ E+ ++ ++ L +A Sbjct: 120 TYLLKKYGIQRVDILEEISH---KDEDEQKNDENSE--------NEKVLDKNSSELVSIA 168 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G IDP+IGR++E+ R I++L RR+KNNP+LVGE GVGKTAIAEGLA +I Q VPE + Sbjct: 169 KKGEIDPVIGRDREISRVIEILSRRKKNNPILVGEPGVGKTAIAEGLALQIAQKKVPEFL 228 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 D ++SLD+GS++AGTKYRGDFEK+ K+LLK++ + N+ILFIDEIHTI+GAG+ G Sbjct: 229 LDSKVFSLDMGSMIAGTKYRGDFEKKLKSLLKEVSKIKNAILFIDEIHTIVGAGSVGGSA 288 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+N++KP+L++GK+R IG+TT+ EF N F KD+AL+RRF K+D+ EPSIE+++ I+ G Sbjct: 289 MDASNILKPMLANGKLRCIGATTFSEFRNDFSKDKALSRRFAKVDVEEPSIEDSILILEG 348 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK- 419 LK KYE +H V+Y+ A+++AVEL+ KYI DR LPD AIDVIDE GA ++ + K Sbjct: 349 LKSKYEEYHGVKYSKSAIQSAVELSKKYITDRFLPDCAIDVIDEVGAAKKISLATTLKTK 408 Query: 420 -----TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 T+ D+E +++++A IP KS +++D LKNL ++ VFGQD AI + +AI Sbjct: 409 AESNITITSKDVEEIISKMAHIPPKSATKTDLSLLKNLEKNMQKRVFGQDTAISTIVQAI 468 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 534 K +AGLG + KP+GSFLF GPTGVGKTEV +LS +GI RFDMSEYME HTVSRLI Sbjct: 469 KRNKAGLGLDKKPIGSFLFTGPTGVGKTEVARELSLQMGIHFERFDMSEYMEAHTVSRLI 528 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAP GYVGF+QGGLLT+A+ KHPH VLLLDEIEKAHPD+ +ILLQVMDN LTDN+G KA Sbjct: 529 GAPAGYVGFEQGGLLTEAIRKHPHTVLLLDEIEKAHPDLMSILLQVMDNAQLTDNSGNKA 588 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 DF+NVVL+MT+N G TE +G ++ + + I K F PEFRNRLD ++ F+ L+ Sbjct: 589 DFQNVVLIMTSNLGA--TEANVMGF-AKNEKLNENKAINKFFAPEFRNRLDAVVTFESLN 645 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 DV+ +VV KFI +L+ QL K + +E+S +A+ LA GYD+AMGARP+ +VI D +K Sbjct: 646 IDVVSKVVGKFIEDLEKQLVDKKIKIEISVKAKKELAILGYDKAMGARPLNKVISDKIKN 705 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 PL +E+LFG L GG V + + NE + F + Sbjct: 706 PLTDEILFGKLKKGGIVKIDYN---NEFIFNFSN 736 >UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ClpA n=26 Tax=Proteobacteria RepID=Q2GGQ4_EHRCR Length = 765 Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/761 (47%), Positives = 528/761 (69%), Gaps = 14/761 (1%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L++ LE SL+ A + A + HE+ T+EHLLLAL + AR A V + L+ + Sbjct: 7 VLSKNLEASLHKALSIAFDFHHEYATLEHLLLALTDDIDARRVFYAFRVSIDKLKITIIN 66 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F+ P L + + +PT F+R++ RA+ H +SG++EVTGAN+L I SE++S + Sbjct: 67 FLRYEIPTL-IDKGISEVKPTAIFERLIHRAIIHAHTSGKSEVTGANILAEILSEKDSYS 125 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGE---------ERMEN 171 A L + + +DVVN+ S+ + N ++ G E +++ Sbjct: 126 ACFLHEQNIKYIDVVNYTSNNNLYAGEFNVDQEFVKYNEYGKSIGNVNKDILKDNETLDS 185 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 + NLN+ A+ G ID +IGR ELER ++VL RRRKNNPL VG+ GVGKTAI EGLA +I Sbjct: 186 YCVNLNEAAKKGKIDYVIGRAYELERTMEVLLRRRKNNPLYVGDPGVGKTAIVEGLALKI 245 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 ++GDVP+ + IYSLD+G+LLAGT+YRGDFE+R K+++K +E N+ILFIDEIHTI+ Sbjct: 246 IEGDVPDQLKKMVIYSLDMGALLAGTRYRGDFEERIKSVIKAIEAKENAILFIDEIHTIV 305 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 GAG+ SGG +DA+NL+KP L+ G +R IG+TTY+E++N FEKDRALARR+QKI++ E S+ Sbjct: 306 GAGSTSGGSLDASNLLKPALARGTLRCIGATTYKEYNNNFEKDRALARRYQKINVEESSV 365 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 ET++I++G+K YE+HH VRYT +A++ A EL+ +YI+ + LPDKA+DVIDEAG +L Sbjct: 366 GETLRILDGIKSYYESHHQVRYTNQAIKYAAELSDRYISGKMLPDKAVDVIDEAGVYCKL 425 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 K + +DIE +++RI IP ++ +D D +KNL + LK +FGQD AI L Sbjct: 426 HNTG--NKVITGSDIEHIISRITEIPCSNLLFNDLDRVKNLEENLKKDIFGQDFAISHLV 483 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVS 531 ++IK+A+AGL + +KP+ S+LF+GPTGVGKTE+ QL+ +G++L+RFDMSEYME H +S Sbjct: 484 DSIKIAKAGLRNYNKPLASYLFSGPTGVGKTELARQLANHMGMKLIRFDMSEYMESHAIS 543 Query: 532 RLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 ++IG+PPGYVG+DQGGLLTD++ +H ++VLLLDEIEKAH D++NILLQ+MD G +TD G Sbjct: 544 KIIGSPPGYVGYDQGGLLTDSISRHQYSVLLLDEIEKAHSDIYNILLQIMDYGCVTDTYG 603 Query: 592 RKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST--DAMEEIKKIFTPEFRNRLDNIIW 649 +K +F NVV+++TTNAG E + SIG I + T D + I++IF+PEFRNRLD II Sbjct: 604 KKVNFHNVVIILTTNAGAFELSKSSIGFIRNKSFTHGDNEKAIERIFSPEFRNRLDAIIS 663 Query: 650 FDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 F L +V+ ++V KFI +L+ QL +K V ++V+ + +LA+ GY+ A G R + +I Sbjct: 664 FSSLDQEVMLRIVKKFIYQLKEQLAKKNVHIDVADDVLMYLAQSGYNDAYGVRNIENIIS 723 Query: 710 DNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 +KK LA E+LFG L +GG V + LD + N+L Y F A+ Sbjct: 724 KKVKKYLAEEILFGKLFNGGNVKIKLDADTNKLVYDFCCAE 764 >UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n=14 Tax=Rickettsiales RepID=D1AUG7_ANACI Length = 781 Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/764 (48%), Positives = 517/764 (67%), Gaps = 23/764 (3%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L++ LE SL+ A + A + RHE T+EHLLLAL + R L C V + LR L Sbjct: 14 VLSKNLEASLHRALSIAFDFRHECATLEHLLLALTDDLDVRRVLYVCRVSIDRLRATLIN 73 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F+ + ++ + +P+++F++V+ RA+ H +SG++E+ G NVL IF E++S + Sbjct: 74 FLRYEMSI-AMNQSVTEVRPSMAFEKVVHRAIVHAHASGKDEINGVNVLAEIFLEKDSCS 132 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAG-------------GEE 167 L +H V +DVV+ IS +E D G + ++ E Sbjct: 133 VSFLNEHNVKYIDVVSCISSNEHPEELYDQHDLGKDVDFVKRGAVGFPHISKDVVSKDGE 192 Query: 168 RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGL 227 +E + NLN LA+ G ID +IGR+ E ER I+VL RRRKNNPL VG+SGVGKTAI EGL Sbjct: 193 SLEAYCVNLNVLAKNGKIDYVIGRQYEQERTIEVLLRRRKNNPLYVGDSGVGKTAIVEGL 252 Query: 228 AWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEI 287 A RIV+G++ + IYSLD+GSLLAGT+YRGDFE+R KA+++ +E N++LFIDEI Sbjct: 253 ALRIVEGNIVPQLKCVEIYSLDMGSLLAGTRYRGDFEERIKAVIRAIENKKNAVLFIDEI 312 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HTIIGAG+ SG +DA+NL+KP L+ G IR IG+TTY+E+++ FEKDRALARR+QKI++ Sbjct: 313 HTIIGAGSTSGSPLDASNLLKPALARGSIRCIGATTYKEYNSNFEKDRALARRYQKINVE 372 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 E ++EET+QI++G+K YE +HDV YT++AV+ A EL+ +YI +R LPDKA+DV+DEAG Sbjct: 373 ESTVEETIQILSGIKSYYEIYHDVHYTSQAVKYAAELSDRYIAERMLPDKAVDVLDEAGV 432 Query: 408 RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 A+L + K V DIES+++RI IP ++ SD +KNL + LK ++FGQD AI Sbjct: 433 YAKLRS-GENGKVVTGRDIESIISRITEIPCDNLFASDTHKVKNLEENLKQVIFGQDAAI 491 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMER 527 + +AI++A+AGL KP+ S+L AGPTGVGKTE+ QL+K +G++L+RFDMSEYME Sbjct: 492 SQIVDAIRIAKAGLRSHQKPLASYLLAGPTGVGKTELVKQLAKNMGMKLVRFDMSEYMES 551 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 HTV+R+IG+PPGYVG++QGGLLTD + ++ ++VLLLDEIEKAH V+NILLQ+MD G +T Sbjct: 552 HTVARMIGSPPGYVGYEQGGLLTDTIARNQYSVLLLDEIEKAHSSVYNILLQIMDYGCIT 611 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGL-----IHQDNSTDAMEEIKKIFTPEFRN 642 D GRK FRNVV+V+TTNAG E + ++G H + A+E KIF PEF N Sbjct: 612 DTYGRKVSFRNVVIVLTTNAGAVEFSQNAVGFDRDRTFHIGSERKAIE---KIFGPEFCN 668 Query: 643 RLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 RLD ++ F +LS DV+ +VV KFI EL+ QL +KGV + + + + +L + G GAR Sbjct: 669 RLDAVVSFSYLSADVMEKVVGKFIAELRDQLSRKGVDISIDKASVEFLTKMGQQDGYGAR 728 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 VI +KK LA E+LFG L GG+V V D +K + +Y F Sbjct: 729 KAQSVIAQKIKKHLALEMLFGKLAYGGRVEVRFDPQKEDFSYEF 772 >UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit ClpA n=4 Tax=Clostridium RepID=A3DES0_CLOTH Length = 776 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/751 (48%), Positives = 496/751 (66%), Gaps = 34/751 (4%) Query: 13 AFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPAS 72 A+ A+ +HEF T EH+L A L R+ +E C + ++++L F P++ Sbjct: 15 AYNEAKHQKHEFFTPEHILYASLFFDEGRDIIENCGGKVEDIKKDLLEFFRNNMPIV--- 71 Query: 73 EEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRL 132 E + +L V+Q + ++GR + +++VA++ E+ES A+Y+L+K+ + +L Sbjct: 72 -ENHEPIESLGINSVMQATAYQCIAAGREYIRIGDIIVALYGEKESFASYILQKNGIKKL 130 Query: 133 DVVNFISHGTR---KD--------------EPTQSSDPGSQPNSEE-----------QAG 164 DV+ +ISHG K+ E Q +D E + Sbjct: 131 DVLKYISHGVSLVPKNMETSLKSLETDTYLEAYQYADDWEYDYEYEDIDEDEDIDEESSS 190 Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 +E+FT +L + AR G IDPLIGRE LER IQVL RR KNNP+ VG+ GVGKTAI Sbjct: 191 KSNFLEHFTIDLTEKARKGKIDPLIGREDILERTIQVLSRRLKNNPIHVGDPGVGKTAIT 250 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFI 284 EGLA IV+ VP+ + IY LD+GS+LAGTKYRGDFE+R K +L +++ +I++I Sbjct: 251 EGLARLIVEDKVPKSLKGSKIYYLDMGSMLAGTKYRGDFEERIKKVLNEIQNQPKAIVYI 310 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DEIHTI+GAGA S G +DA+N+IKP L+ G +R IGSTTY+E+ FEKDRAL+RRFQKI Sbjct: 311 DEIHTIVGAGAVSDGAMDASNIIKPFLTQGTLRFIGSTTYEEYKKYFEKDRALSRRFQKI 370 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 D+ EPSI++T +I+ GLK +YE +H V+YT A+R A EL+ KYI DRHLPDKAIDVIDE Sbjct: 371 DVPEPSIDDTFKILKGLKDRYEEYHKVKYTDSALRLAAELSAKYIQDRHLPDKAIDVIDE 430 Query: 405 AGARARLMPVSKRKK-TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 GA RL + K T+ DIE V+ IARIP +SVS+ + LKNL +LK +FGQ Sbjct: 431 TGAYVRLHAKDEDKVITIKNKDIERTVSAIARIPIQSVSRDEISKLKNLDVKLKSTIFGQ 490 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSE 523 DKAI+ + +AIK +RAG KPV S LF GPTGVGKTE+ QLS LGI +RFDMSE Sbjct: 491 DKAIDTVVQAIKRSRAGFNENEKPVASLLFVGPTGVGKTELAKQLSLHLGIPFIRFDMSE 550 Query: 524 YMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDN 583 Y E+HTVSRLIGAPPGYVG+++GGLLTDA+ K PH VLLLDEIEKAHPD++N+LLQVMD Sbjct: 551 YQEKHTVSRLIGAPPGYVGYEEGGLLTDAIRKTPHCVLLLDEIEKAHPDIYNVLLQVMDY 610 Query: 584 GTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-EEIKKIFTPEFRN 642 LTDNNG+KADFRNV+L+MT+NAG RE R IG ++ AM +E+++IF+PEFRN Sbjct: 611 AVLTDNNGKKADFRNVILIMTSNAGAREVGRTLIGFDSRNVDRSAMTKEVERIFSPEFRN 670 Query: 643 RLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 RLD+I+ F+H++ ++ + K I + + +L K + L+V++ W+A+KG GAR Sbjct: 671 RLDDIVVFNHINEEMALLITKKAINQFKEKLKTKNIKLKVTERCCKWIAQKGLSSIYGAR 730 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 + R +QD +K +E+LFG L GG + Sbjct: 731 EILRYVQDKIKTYFVDEVLFGELSKGGTAII 761 >UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6QBZ7_SULNB Length = 729 Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/746 (46%), Positives = 501/746 (67%), Gaps = 23/746 (3%) Query: 6 LELSLNMAFARA----REHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + ++LN F A +E+RHE++TVEH+ L+++ + E L +L L E Sbjct: 2 ISIALNDVFKNAVKYAKENRHEYLTVEHVFLSVVRSEEGIEILSTLDANLEILE---EGI 58 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 +E +P+ +E + T++ R + + H+ S+GR E + ++L AIF ++ S A Sbjct: 59 VEHIHKTIPSLKEAVEPFETVALSRAINDMMTHIHSAGRTEASIGDMLAAIFMQEHSYAV 118 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 YL++K ++R+D++ ISH R+D +Q +++ A E +E FT L LA+ Sbjct: 119 YLMKKEGIARVDILEVISH-NREDH--------AQTETDKSAKEETVLEQFTMELVALAK 169 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G IDP++GR E+ R +Q LCRR+KNNPLLVGE GVGKTAIAEGLA +I +GDVP+V+ Sbjct: 170 TGKIDPVVGRVDEINRVMQTLCRRKKNNPLLVGEPGVGKTAIAEGLALKISEGDVPDVIK 229 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 D +Y+LD+G+L+AGTKYRGDFEKR K ++ +L Q ++ILFIDEIHT++GAGA SGG + Sbjct: 230 DAKVYALDMGALIAGTKYRGDFEKRLKGIINELSQMDDAILFIDEIHTMVGAGATSGGSM 289 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DA+NL+KP L+ G ++ IG+TTY E+ N F+KD+AL+RRF KID+ EPS+E+T I+ G+ Sbjct: 290 DASNLLKPALARGDLKCIGATTYAEYRNFFDKDKALSRRFAKIDVEEPSVEDTFTILKGV 349 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTV 421 + KYE HH++++T +A+++A++L+VKY++DR LPDKA+D+IDE G A M V Sbjct: 350 QHKYEDHHNIKFTDEALQSAIDLSVKYLHDRFLPDKAMDIIDEVG--AHFMLKGAEGVIV 407 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 DIE VA++ ++P + D LK L L + GQ++AIE L AIK + AGL Sbjct: 408 KPKDIEESVAKMMKLPSTVIGTDDTKKLKTLEKDLSAHIIGQNEAIEELATAIKRSYAGL 467 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYV 541 ++P+GSFLF GPTGVGKT + QL++ + + R DMSEYME HT+SRL+GAPPGYV Sbjct: 468 NAPNRPIGSFLFVGPTGVGKTALATQLAETMHVHFERIDMSEYMEAHTISRLVGAPPGYV 527 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G++QGGLLT+ + KHPH VLLLDEIEKAHPD+ NILLQVMD LTDNNG +DF+NV+L Sbjct: 528 GYEQGGLLTEMIKKHPHTVLLLDEIEKAHPDIMNILLQVMDGAKLTDNNGVVSDFKNVIL 587 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 +MT+N G +E ++ ++DNS + +K F PEF NRL ++ F+ L + + + Sbjct: 588 IMTSNIGTKEA---NVMGFNKDNSMKTDKALKAFFAPEFMNRLSAVVEFNTLDLETLVSI 644 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 VD + +L + L K + ++VS++A+ +LA +GYD GAR +ARVI + +K+ L E+L Sbjct: 645 VDVELDKLNLMLKPKNIKVKVSKKAKEYLANEGYDERYGARHIARVIDEKIKEALTEEIL 704 Query: 722 FGSLVDGGQVTVALDKEKNELTYGFQ 747 FG L GG V V L K LT+ F Sbjct: 705 FGRLKKGGLVKVGLKNGK--LTFEFS 728 >UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 Length = 746 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/715 (47%), Positives = 490/715 (68%), Gaps = 6/715 (0%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVL 69 + A+ AR +HE+ T EH+L A L P + +E+C ++ ++++L + Sbjct: 11 ITAAYNEARYCKHEYFTPEHVLYAALFFPEGIDIIESCGGNVKNIKRDLLQYFNDNI--- 67 Query: 70 PASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV 129 + E+++ T+ Q +L A HV ++ + + ++ ++I+ E++S A++ LRK + Sbjct: 68 -ETTEKKEPLETIGLQNILTSAGEHVLAAEKEVIKLGDIFISIYDEEQSFASFFLRKQGI 126 Query: 130 SRLDVVNFISHGTRKDEPTQSSDPGSQP-NSEEQAGGEERMENFTTNLNQLARVGGIDPL 188 R+D++N+I+HG + + S+ EE + +F +L Q A++G +DPL Sbjct: 127 RRIDILNYITHGISATMFDYNIEEDSKYLVDEEDTQSVLNIGDFAVDLTQKAKMGDMDPL 186 Query: 189 IGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL 248 IGRE + R IQVL RR KNNP+ VGE GVGKTAI EGLA IV+ VP ++ D IYSL Sbjct: 187 IGREDIIYRTIQVLSRRNKNNPIHVGEPGVGKTAITEGLAKLIVENKVPNLLKDSKIYSL 246 Query: 249 DIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIK 308 D+GS+LAGTKYRGDFE R K LK+++++ I++IDEIHTIIGAG+ SGG +DAAN++K Sbjct: 247 DMGSILAGTKYRGDFEDRIKNTLKKIQKEDKPIVYIDEIHTIIGAGSVSGGSLDAANILK 306 Query: 309 PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH 368 P L+SGKI+ IGSTTY E+ IFEKDRALARRFQ+I++ EPS+E+T I++G+K YE Sbjct: 307 PFLTSGKIKFIGSTTYDEYKKIFEKDRALARRFQRIEVPEPSVEDTYSILSGIKEHYEKF 366 Query: 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIES 428 H+V Y +A+++AV+L+VKYINDR LPDKAIDVIDE GA RL +K ++ IE Sbjct: 367 HNVIYKEEALKSAVDLSVKYINDRFLPDKAIDVIDETGAYVRLHSSDDKKIVIDKVHIEK 426 Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 +A +A+IPE+++SQ + LK+L LK VFGQ++AI++L AIK +RAG ++K V Sbjct: 427 TIAAMAKIPEQTLSQDETKVLKDLDKVLKKKVFGQEEAIDSLVRAIKRSRAGFNEDNKTV 486 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 S LF GPTGVGKTE++ QL+KAL I +RFDMSEY E+HTV+RL+G+PPGYVG+++GGL Sbjct: 487 ASLLFVGPTGVGKTEISKQLAKALNIPFIRFDMSEYQEKHTVARLVGSPPGYVGYEEGGL 546 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LTD + K P+ VLLLDEIEKAHPDV NILLQ+MD TLTDN G+K DF+N ++MT+NAG Sbjct: 547 LTDVIRKTPYCVLLLDEIEKAHPDVLNILLQIMDYATLTDNTGKKTDFKNTTIIMTSNAG 606 Query: 609 VRETERKSIGLIHQDNSTDAM-EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 R + +G + DA+ EE+ +IF+PEFRNRLD+II+F+ ++ + + V K + Sbjct: 607 ARSVGKALMGFGERIVKKDAISEEVNRIFSPEFRNRLDDIIYFNSMNDKMAYLVAKKVVG 666 Query: 668 ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 + + QL K + + V+ + WL++KG GAR + R++Q ++K +++LF Sbjct: 667 QFEKQLLSKDIKINVTDKCYRWLSKKGVSLEYGAREIIRIVQQDIKPYFVDKVLF 721 >UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Helicobacter RepID=C5ZY74_9HELI Length = 746 Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/743 (46%), Positives = 506/743 (68%), Gaps = 18/743 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +++EL L A +RA+ HE++T+EH+ +LL + + +A++ C ++ AL+ ++E + Sbjct: 4 ISKELNYILQAAQSRAKHLGHEYLTLEHIFHSLLDSQTVIKAIQECGGNIKALKSQIERY 63 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + P + E TL+ RV++ V HV+ + R E ++L AI E ++ Sbjct: 64 LTHFLQSHPDASEL--PIETLAVTRVIEIMVSHVKGAQRKEAQVGDLLAAILEEDKAFCT 121 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 LL+ ++RL+++ +I+ +++ TQ + Q +++ E +E + NL Q A+ Sbjct: 122 QLLKAQGITRLNILEYIT----ENQDTQQA----QKFEKDENKQESILEKYCINLTQEAK 173 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G IDP+IGR+KE+ER ++VL RR+KNNPLLVGE GVGKTAIAEGLA + Q + P + Sbjct: 174 EGKIDPIIGRDKEIERCLEVLLRRKKNNPLLVGEPGVGKTAIAEGLAIVLNQENNP--LF 231 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 I+ L++G+L+AGTKYRGDFEKR KAL +++ + N ILFIDEIH +IGAGA + G + Sbjct: 232 GNEIFMLNMGALVAGTKYRGDFEKRIKALSEEVLERKNVILFIDEIHMLIGAGATNSGSM 291 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DA+NL+KP+L SGK+R IG++TY E+ N +KD+A +RRF KID+ EPS EE V I+ G+ Sbjct: 292 DASNLLKPMLGSGKLRCIGASTYAEYRNFLDKDKAFSRRFAKIDVDEPSQEEAVLILQGV 351 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTV 421 K YE HH+V Y + +R AVEL+ +Y++DR LPDKAIDVIDE GA +L S + V Sbjct: 352 KKYYEKHHNVIYPLETLRLAVELSSRYLHDRFLPDKAIDVIDEVGAAYKLASKSGK---V 408 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 +++ I+ +VA++A+IPE ++ D++ LKNL L+ +FGQD AI+ + A+K RAGL Sbjct: 409 SLSSIKQMVAKMAKIPEIEATKDDKNLLKNLQKHLQSRIFGQDLAIKEIVTALKRNRAGL 468 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYV 541 G +KP+GSFLF+GP+GVGKTE+ +++KALGI R DMSEYME+++ S LIGAP GYV Sbjct: 469 GAPNKPIGSFLFSGPSGVGKTELAKEIAKALGINFERIDMSEYMEKYSSSGLIGAPAGYV 528 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+D+GG+LT+ + K+PH +LLLDEIEKAHPDV NI LQVMDN LTDNNG ADF +V+L Sbjct: 529 GYDKGGILTEMIKKNPHTLLLLDEIEKAHPDVLNIFLQVMDNAKLTDNNGESADFSSVIL 588 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 +MT+N G +E ++G QD+ IK FTPEFRNRLD I+ F+ LS I ++ Sbjct: 589 IMTSNVGSKEA--PTLGFT-QDSVAKFNSAIKDNFTPEFRNRLDAIVAFNPLSETEILKI 645 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 V+K I +L Q+ K + + + + A+ LA+ GY+ +GARP+ VIQ+ +K PL++ +L Sbjct: 646 VEKNINDLNKQIAPKNIHILLDKSAKEQLAKLGYNPELGARPLGLVIQEKIKNPLSDLML 705 Query: 722 FGSLVDGGQVTVALDKEKNELTY 744 FG L GG+V + +K+ + +Y Sbjct: 706 FGELEKGGEVIFSYNKKSDSFSY 728 >UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Treponema pallidum RepID=B2S440_TREPS Length = 809 Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/778 (46%), Positives = 509/778 (65%), Gaps = 57/778 (7%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +++ +++ L+ AF AR+ RHE++T EH+L + L++P+A E + CS D+ + L Sbjct: 4 IISASVQIILDQAFDLARKRRHEYITAEHVLFSALAHPAALEIINLCSADIALIHSNLSE 63 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F++ PV + +L FQ +L+RAV + +++ ++ + ++LV++ + + A Sbjct: 64 FLKTQVPV----DLSHTPSQSLGFQHLLKRAVLYCEANKKSALEVGDLLVSLLQAETNYA 119 Query: 121 AYLLRKHEVSRLDV------VNFISHGTR--------KDEPTQSSDPGSQPNSEEQAGGE 166 +Y +R +S + VN I HG + ++ ++S D G G Sbjct: 120 SYYMRMSGMSTARLIEVIARVNGIRHGDKNVSMGSNAQERYSESDDVGESAGHGPPLDGT 179 Query: 167 ER----------------------------MENFTTNLNQLARVGGIDPLIGREKELERA 198 E +E +T NL + AR G + PLIGR +E+ER Sbjct: 180 EGDGNTADVHVHYEHCAHKRTDADTHRYTVLEKYTVNLTERARRGELAPLIGRTQEIERT 239 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 IQ+LCRR+KNNP+ VGE+GVGKTAI EGLA RIV+ DVPE + I+SLD+ SLLAGTK Sbjct: 240 IQILCRRQKNNPVHVGEAGVGKTAITEGLAQRIVRCDVPEALEGVEIFSLDMTSLLAGTK 299 Query: 259 YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRV 318 +RGDFE+R K L ++LE+ T +ILFIDEIHT++G G+ G +DA+NL+KPLLSSGKIR Sbjct: 300 FRGDFEERLKRLAEELEKKTQAILFIDEIHTVVGTGSGGSGGLDASNLLKPLLSSGKIRC 359 Query: 319 IGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAV 378 IGSTTY+E++ F KD+ALARRFQKIDI EPS EET++I+ G++ YE H V Y+ +A+ Sbjct: 360 IGSTTYEEYTKHFRKDQALARRFQKIDIEEPSEEETLRILEGIRTLYEDFHAVHYSDEAL 419 Query: 379 RAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK-------KTVNVADIESVVA 431 AAV L+V+YI RHLPDKAID+IDEAGA A+L S+ K + +DI+ +VA Sbjct: 420 AAAVRLSVQYIQGRHLPDKAIDIIDEAGACAKL---SRGKHGTEGVCSVIGESDIDEIVA 476 Query: 432 RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 +IA+IP++ VS S+ + L+N + +FGQ +AI+ +T +K AR GL +HKP+ + Sbjct: 477 KIAKIPKQRVSASEIEKLRNFERSISEKIFGQGEAIDLVTRTLKRARVGLRVKHKPIANL 536 Query: 492 LFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD 551 LF G TGVGKTE+ L++ LGI L RFDMSEY E+HTVSRLIG+PPGYVGF++GGLLTD Sbjct: 537 LFVGATGVGKTELARTLAQELGIVLHRFDMSEYQEKHTVSRLIGSPPGYVGFEEGGLLTD 596 Query: 552 AVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE 611 AV K PHAVLLLDEIEKAHPD+FN+LLQVMD TLTDN GRKADFRNV+L+MT+NAG R Sbjct: 597 AVRKQPHAVLLLDEIEKAHPDIFNVLLQVMDYATLTDNQGRKADFRNVILIMTSNAGARN 656 Query: 612 TERKSIGLIHQDNSTDAMEE-IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQ 670 IG T ++E +++IF+PEFRNRLD +I FD LS + + ++ K + + Sbjct: 657 MGVSLIGFHKGQVGTAVIDEAVERIFSPEFRNRLDAVIRFDALSLETMERIARKELALVC 716 Query: 671 VQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 QL +K + +++ +A LAE+ + GAR +AR+++ + LA+ +LFG + +G Sbjct: 717 EQLQKKHIRFDITDDALALLAERSHSGGSGARNVARLVEQEVANVLADLMLFGGVAEG 774 >UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ClpA n=1 Tax=Treponema denticola RepID=Q73KU3_TREDE Length = 785 Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/761 (43%), Positives = 487/761 (63%), Gaps = 43/761 (5%) Query: 13 AFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPAS 72 A A++ HEF+T EHLL A++ NP A E DL + L ++E PV Sbjct: 16 AVEDAKKRNHEFVTPEHLLWAIMFNPKALELFTLSGSDLGYIHDNLNTYLENKVPVRTQD 75 Query: 73 EEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRL 132 + Q T+ Q V +RA+ + ++ + + +++V++ E+++ ++ +++ + RL Sbjct: 76 NQAEPIQ-TVGLQNVFERAILNCNAAEKPVIGINDIIVSLMDEEKNHCSFFMKQSGIDRL 134 Query: 133 DVVNFIS-----------------------HGTRKDEPTQSSDPGSQPNSEEQAGGEERM 169 ++ +S G ++D +S+ + N+++ + + Sbjct: 135 RLLQLVSSPDFYDDGKNRSAYEEAEDVQEAQGVKEDSARHNSE---EKNTDKSKAQKTYL 191 Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAW 229 E FT NL + AR G + P+IGRE+E+ER IQ+LCR++KNNP+ VG +GVGKTAI EGLA Sbjct: 192 ERFTVNLTEKARKGRLSPIIGREEEIERTIQILCRKQKNNPIHVGGAGVGKTAITEGLAQ 251 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHT 289 RI VP + + IYSL + LLAG K+RGDFE+R K ++ ++ ++ N+ILFIDEIHT Sbjct: 252 RITANKVPSFLKNANIYSLSLSDLLAGAKFRGDFEERLKRIVSEISREKNAILFIDEIHT 311 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 I+ A + GG ++A +L+KP+L++GK+R IG+TT++E++ F KD ALARRFQKIDI EP Sbjct: 312 IVNANSGGGG-IEAPDLLKPILANGKVRCIGATTFEEYNKHFTKDAALARRFQKIDIEEP 370 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 + EE V+I+ GL+ YE H V Y+ + + +AV L+ +I DR LPDKAID+IDEAGA Sbjct: 371 NEEEAVKILKGLRESYENFHKVHYSDEVLESAVHLSAIHIRDRFLPDKAIDLIDEAGALI 430 Query: 410 RLMPVSKRKKT--------------VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 ++ ++ + V+++DI+ +VA+ A+IPE+ VS ++ + L++ + Sbjct: 431 KIRADKEKNENEADEKGLEETALPEVSLSDIDKIVAKTAKIPEQRVSVNETEKLRHFEEI 490 Query: 456 LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE 515 L +FGQD AIE +T+A+K +RAG + KPV +FLF GPTGVGKTE+ L++ LGI Sbjct: 491 LSKKIFGQDTAIEGVTKAVKRSRAGFRSKDKPVANFLFVGPTGVGKTELAKTLAEELGIP 550 Query: 516 LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFN 575 LLRFDMSEY E+HTVSRLIG+PPGYVGF++GGLLT AV K P+AVLLLDEIEKAH D++N Sbjct: 551 LLRFDMSEYQEKHTVSRLIGSPPGYVGFEEGGLLTSAVQKSPNAVLLLDEIEKAHADIYN 610 Query: 576 ILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE-IKK 634 ILLQ+MD TLTDN GRKA F N++L+MT+NAG + IG + S A++E ++K Sbjct: 611 ILLQIMDYATLTDNQGRKAAFNNIILIMTSNAGSSNIGKPLIGFGGERISESAVDEAVEK 670 Query: 635 IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKG 694 FTPEFRNRLD II F L+ V+ ++ K + +++ QL +K +SLE+ + LAEKG Sbjct: 671 TFTPEFRNRLDAIIKFGPLTMQVMSLIIKKEVEKIRSQLAEKEISLELEDDVIPLLAEKG 730 Query: 695 YDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 Y GAR AR+++D PL + +LFG G V + Sbjct: 731 YSEEFGARNAARLVEDEFVTPLTDMILFGETKKGSSVKCQI 771 >UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XML9_9HELI Length = 756 Score = 635 bits (1639), Expect = e-180, Method: Compositional matrix adjust. Identities = 326/746 (43%), Positives = 496/746 (66%), Gaps = 14/746 (1%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +++EL + L A A++ HE++T+EH+ ALL N + L+ C ++ ++++++ + Sbjct: 4 ISKELNVVLQNAQKEAKDKGHEYLTLEHIFYALLENEKITKTLQDCGGNVEIMKKQIQRY 63 Query: 62 IEQTTPVLPASEEERDT-QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 ++Q P +E+ Q TL+ RV++ + HV+ S R + +++L AI E+++ Sbjct: 64 LKQFLQSYPERQEQGAMPQETLAVTRVIEIMIGHVKGSQRQQAQVSDLLAAILEEEKAFC 123 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A +L ++RL+V+ +I+ +S + E++ E +E + TNL Q+A Sbjct: 124 AQILNAQGITRLNVLEYITENQENFSFNKSIKEEVKDEGEKR---ESALEAYCTNLTQMA 180 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G I+PLIGRE E+ R +VL R++KNNPLLVGE GVGKTA+AEGLA +++ P + Sbjct: 181 REGKIEPLIGREVEIRRCFEVLLRKKKNNPLLVGEPGVGKTAVAEGLALQMIATQSP--L 238 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + +Y L++G+L+AGTKYRGDFEKR K L ++ + N ILFIDEIH +IGAGA + G Sbjct: 239 ENTEMYMLNMGALVAGTKYRGDFEKRIKTLTDEVLELGNVILFIDEIHMLIGAGATNSGS 298 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+NL+KP+L +GK+R IG++TY E+ + +KD+AL+RRF KI++ EPS EE++ I+ G Sbjct: 299 MDASNLLKPMLGNGKLRCIGASTYAEYRSFLDKDKALSRRFAKIEVKEPSREESILILEG 358 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 +K YE +H+V + ++A+ V+L++++++DR LPDKAID++DE GA +L S + Sbjct: 359 VKKHYEKYHNVSFNSEAIELIVDLSIRHLHDRFLPDKAIDIMDEVGASYKLDGKSGK--- 415 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V++ I+ +VA +A+IPE ++ D+ LK L LK +FGQD AI + A+K +AG Sbjct: 416 VSLQSIKKMVATMAKIPEIEATKDDKAVLKGLEKHLKSRIFGQDNAIVEVVSALKRNKAG 475 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 LG +KP+GSFLF+GP+GVGKTE+ +L+KAL I R DMSEYMER + S+LIGA GY Sbjct: 476 LGAPNKPIGSFLFSGPSGVGKTELAKELAKALNINFERLDMSEYMERISSSQLIGAAAGY 535 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+++GG+LT+ + K+PH +LLLDE+EKAHPDV N+ LQVMD G LTDNNG DF +V+ Sbjct: 536 VGYEKGGILTEMIKKNPHTLLLLDEVEKAHPDVLNVFLQVMDYGRLTDNNGESIDFSSVI 595 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L++T+N G +E +G QD + IK F+PEFRNRLD II F+ LS I + Sbjct: 596 LILTSNVGSKEA--PVLGF-KQDTNLRFSSAIKDHFSPEFRNRLDAIIAFNPLSHKEILK 652 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +VDK IV+L Q+ +K V + + + ++ +LA+ G+D +GARP+ VIQ +K L++ + Sbjct: 653 IVDKNIVDLNNQILEKKVEIILDKSSKEYLAKIGFDVELGARPLGLVIQKEIKNILSDAM 712 Query: 721 LFGSLVDGGQVTVALDKEKNELTYGF 746 LFG L GG K K LT+ F Sbjct: 713 LFGELSKGGVAHFTCVKGK--LTHKF 736 >UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFH5_9HELI Length = 763 Score = 634 bits (1636), Expect = e-180, Method: Compositional matrix adjust. Identities = 328/755 (43%), Positives = 480/755 (63%), Gaps = 49/755 (6%) Query: 21 RHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQP 80 RH+ +T+EH +L NP RE +EA + L L A++E+ P A +E Sbjct: 23 RHDVLTIEHAFYVMLENPLGRELVEATGANTKILMDSLGAYLEKHIPKGRALKELEAPHQ 82 Query: 81 TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLD----VVN 136 T +F RV + H +++ + V + VA+ E++ A LL+ + D VV+ Sbjct: 83 TPAFMRVFDHMISHAKNAQKASVGIGDFFVALMQEEDCYCARLLKAQGIQIEDVMRIVVD 142 Query: 137 FISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELE 196 F H +R E T+ S + ++E + NLNQLA G IDPLIGR+ E+ Sbjct: 143 FDEHVSR--EKTKDS--------------QSQLEKYAKNLNQLAIEGKIDPLIGRDLEIN 186 Query: 197 RAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAG 256 + QVLCRR+KNNP+L+GE+GVGK+AI EGLA RIV+ VP + + IY++D+ S++AG Sbjct: 187 QIAQVLCRRKKNNPMLIGEAGVGKSAIVEGLALRIVERSVPAKLLNNVIYAVDVSSVVAG 246 Query: 257 TKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 TKYRG+FE R K +L ++E+D N I+F DEIH I+GAG ++ G +D +NL+KP+L+SG++ Sbjct: 247 TKYRGEFETRIKKILAEVEKDKNIIIFFDEIHMIVGAGQSNSGGMDFSNLLKPMLASGRL 306 Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAK 376 R IG+TT ++ N F+KD+ALARRF +I + EPS EE + I+ + P YE H+V Y + Sbjct: 307 RCIGATTSHDYKNSFDKDKALARRFTQIKVEEPSEEECLLILEKIAPLYEKFHNVTYENE 366 Query: 377 AVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL---MPVSKRK--------------- 418 A++A V L+ KYI +RHLPDKAID++DEAGA+A+L + +RK Sbjct: 367 AIKACVSLSSKYITERHLPDKAIDLMDEAGAKAQLNEFLCNDERKSETLEKLTKTKKTKK 426 Query: 419 ------KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTE 472 K + IES++A I IP+ +++ + LKNL +LK +F QDKAIE + E Sbjct: 427 DSKTQHKIITKEHIESLMASITNIPKSTINADESMLLKNLESKLKKRIFSQDKAIEKIVE 486 Query: 473 AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSR 532 IK+ +AGLG H+P+ SFLF GP+GVGKTE++ +L+K LGI+ R DMSEY E H++S+ Sbjct: 487 KIKINKAGLGELHRPIASFLFTGPSGVGKTELSKELAKILGIKFERIDMSEYAESHSISK 546 Query: 533 LIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGR 592 LIG+P GYVG+++GGLL + + +PH VLLLDEIEKAH DV+NILLQ+MD+ TLTDN Sbjct: 547 LIGSPAGYVGYEEGGLLINKIRINPHCVLLLDEIEKAHSDVYNILLQIMDSATLTDNQNN 606 Query: 593 KADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDH 652 KADF+NV+L+MT+NAG +E S+G + M IK F+PEFR+RLD II F Sbjct: 607 KADFKNVILIMTSNAGSKEG--NSVGFLDTSEHRVGM-AIKDTFSPEFRSRLDAIIPFMP 663 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 L + + ++ K+I +L L +K ++L +S +A ++A++ D+A+GAR + + I + Sbjct: 664 LGVNELQKIAQKYITDLNETLKEKHITLNLSTKAAQFIAQQSIDKALGAREIKKTIDSAI 723 Query: 713 KKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 K PL+N +LFG L GG ++ + N L + Q Sbjct: 724 KLPLSNAMLFGELRKGG--VAHINVKNNTLVFDIQ 756 >UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ClpA n=11 Tax=Bacteroides RepID=A6KY28_BACV8 Length = 742 Score = 629 bits (1623), Expect = e-179, Method: Compositional matrix adjust. Identities = 337/740 (45%), Positives = 470/740 (63%), Gaps = 34/740 (4%) Query: 9 SLNMAFARAR----EHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQ 64 S+N AFA A+ ++RHEF+T EHLL ALL ++AL C L Q + ++ + Sbjct: 8 SVNYAFASAQSQAMQYRHEFITPEHLLSALLEQVPFQKALAECFCTPEELSQSISEYLSK 67 Query: 65 TTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLL 124 +P E E + + + +LQ A + S E+ +++ + ++S A YLL Sbjct: 68 KVERVP-QEIEYELEISGQLSELLQYAYMTISHSSAEEMDVPHLVQGMLQLEDSWAGYLL 126 Query: 125 RKHEVSRLDVVNFIS-------HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 + E D+ F+S H + E T S S+P N+ T LN Sbjct: 127 K--ETVGEDMPEFLSSLISNYEHMNQFQEETSSEQEKSEP-----------WRNYVTCLN 173 Query: 178 QLARVGGI---DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 + G+ +PLIGR ELER IQVLCR+ KNNPL VGE GVGKTA+ GLA RI G Sbjct: 174 E-----GLQDRNPLIGRNVELERTIQVLCRKEKNNPLHVGEPGVGKTALVYGLAARIEAG 228 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 +VPE + C IY LD+G+LLAGT+YRG+FEKR KA+++ + ++ ++I++IDEIH +IGAG Sbjct: 229 NVPERLTGCRIYELDLGNLLAGTQYRGEFEKRLKAIMEGIRKEGHAIVYIDEIHNLIGAG 288 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 G +DA+N++KP L G+IR IGSTTY+EF+ F + R L RRFQ+IDI EP IEET Sbjct: 289 RTGDGSMDASNMLKPYLEGGEIRFIGSTTYEEFNRYFSRSRGLVRRFQQIDIQEPGIEET 348 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV 414 + I+ GLK +YE H V Y + AV A +YI+DR LPDKAID++DEAGA + P Sbjct: 349 IHIVEGLKERYETFHGVVYEEGVIAYAVTAAARYISDRFLPDKAIDLVDEAGAYREIHPT 408 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 +TV+ A I ++ARI ++ ++ + D TL+ L +R+ ++GQ++A+ + EA+ Sbjct: 409 DTETQTVDKALITDILARICKVDVLAMKEEDNATLETLHERISAKIYGQEEAVCQVVEAV 468 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 534 +MA+AGL E+KP+ S LF GPTGVGKTEV L+ LGI L RFDMSEY E+HTV++LI Sbjct: 469 QMAKAGLLDENKPLASLLFVGPTGVGKTEVAKVLASELGIALQRFDMSEYTEKHTVAKLI 528 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 G+P GY+G++ GGLLTDA+ K P+ VLLLDEIEKAHPD+FNILLQVMD LTDN GRKA Sbjct: 529 GSPAGYIGYEDGGLLTDAIRKTPNCVLLLDEIEKAHPDIFNILLQVMDYAVLTDNKGRKA 588 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-EEIKKIFTPEFRNRLDNIIWFDHL 653 D R+V+L+MT+NAG + + SIG Q + +AM +++KK F PEF NRL + F + Sbjct: 589 DCRHVILIMTSNAGAQFAHQASIGFSGQITAGEAMLKQVKKTFKPEFINRLSATVVFHDM 648 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + +++K + EL+ +L + V +E+S EA L + G+ + GAR M RVI LK Sbjct: 649 DYGMASLILNKKLNELKNKLSARHVGMELSPEAYKHLLKLGFTKEYGAREMDRVITSQLK 708 Query: 714 KPLANELLFGSLVDGGQVTV 733 L E+LFG+L GG+V V Sbjct: 709 PLLMREILFGTLKTGGKVRV 728 >UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Clostridiales RepID=UPI0001973947 Length = 801 Score = 616 bits (1589), Expect = e-175, Method: Compositional matrix adjust. Identities = 333/778 (42%), Positives = 473/778 (60%), Gaps = 57/778 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +++E+ + A A E E++T E LL + P REA E C D L+ +LEA+ Sbjct: 4 IDEEVARVFSGAVKEAGERGLEYVTPELFLLKIADEPMFREAFEECGGDCGELKSKLEAY 63 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 I + +PAS+ +++ P+ +L Q+ G+ + +++ A + + S A Sbjct: 64 IREQ---VPASDGKKEPVPSADLNELLFYTELTTQNCGKRSIDLNHLIAAYYHLENSFAL 120 Query: 122 YLLRKHEVSRLDVV-NFISHGTRKD---EPTQSSDPGSQPNSEEQA-------------- 163 Y L + + + +++ I G + + E + + G NSEE Sbjct: 121 YYLMEQGIEKAELLLELIESGEKWEGEYEEYEVHEGGD--NSEEWEEYYAREYELEKRRE 178 Query: 164 ----------------GGEE------------RMENFTTNLNQLARVGGIDPLIGREKEL 195 GGEE + ++ T LN + + PLIGRE EL Sbjct: 179 ELMRGGGKRTEGKNDDGGEEDIPFGSTEKKREKWRDYVTCLND--SLSDVSPLIGREDEL 236 Query: 196 ERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 255 ER +Q+LCRR KNNPL +GE GVGKTAIA GLA + + VPE + IYSLD+G+++A Sbjct: 237 ERTMQILCRREKNNPLHIGEPGVGKTAIAYGLARLLEEEKVPEALKGARIYSLDLGAMIA 296 Query: 256 GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGK 315 GT+YRG+FEKR K++L LE++ I+++DEIH I+GAGA G DA+NL+KP L++G+ Sbjct: 297 GTQYRGEFEKRLKSVLAGLEREEKPIVYLDEIHNIVGAGAVGEGSFDASNLLKPYLAAGR 356 Query: 316 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTA 375 IR IG+TT++E+ FEK ++L RRFQ I+I+EP EETV+I+ GL+ YE +H V Y Sbjct: 357 IRFIGATTHEEYKKHFEKSKSLVRRFQNIEISEPGEEETVKILEGLRKHYEKYHGVSYKK 416 Query: 376 KAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIAR 435 + AV ++ +YIN+R LPDKAID+IDEAGA +L P+ ++K+TV I+ ++++ R Sbjct: 417 GVMEYAVHMSARYINERFLPDKAIDLIDEAGAYRKLHPLPQKKQTVGKEVIDEILSKTCR 476 Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 IP+K V + L L RL VFGQD+AI+ + AIK +RAGL KP+ SFLF G Sbjct: 477 IPKKVVESGEIKKLAGLERRLSACVFGQDEAIKEVVNAIKFSRAGLSEAGKPLASFLFVG 536 Query: 496 PTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIK 555 PTGVGKTE+ L+ LGI L+RFDMSEY E+H V++LIGAP GYVG+++GGLLT+AV K Sbjct: 537 PTGVGKTEIARSLASELGIRLIRFDMSEYEEKHAVAKLIGAPAGYVGYEEGGLLTEAVRK 596 Query: 556 HPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK 615 +PHAVLLLDEIEKAH D++NILLQVMD TLTDN GRKADFRN+VL+MT+NAG + Sbjct: 597 NPHAVLLLDEIEKAHSDIYNILLQVMDYATLTDNQGRKADFRNIVLIMTSNAGASRLTKA 656 Query: 616 SIGLIHQDNSTDA----MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQV 671 +G + M+E+ ++F PEFRNRL I+ FD + ++ K + EL Sbjct: 657 RLGFGDGAGADGRGSVIMDEVNRVFQPEFRNRLSRIVVFDGIDERTAREIAGKKLRELGA 716 Query: 672 QLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGG 729 L ++ V +++A L +KG R GAR + RVI+ +K LA+ LLFGSL GG Sbjct: 717 LLSERQVEFSFTRQAEALLTKKGVSREYGARELTRVIEREIKPLLADRLLFGSLKRGG 774 >UniRef50_C9PUC6 ATP-dependent Clp protease subunit n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PUC6_9BACT Length = 753 Score = 584 bits (1505), Expect = e-165, Method: Compositional matrix adjust. Identities = 314/725 (43%), Positives = 452/725 (62%), Gaps = 9/725 (1%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVL 69 LN A +R+EF+T EHLL+AL + + AL+A D +AL +L+ + + + Sbjct: 14 LNGALNYCMLYRNEFVTPEHLLMALTNQDNFSIALDASGGDTLALMAQLDGVVGKME-TM 72 Query: 70 PASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV 129 PA L VL A + + ++++ + + + S AAYLL K Sbjct: 73 PADWHHVPDNSVL-LSEVLSNAQKLAMMADVETLQVPHLVMGLINLENSDAAYLLNKQLG 131 Query: 130 SRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLI 189 + NF++ + T + E + E + T +N + +PLI Sbjct: 132 E--NATNFVAELV--ELYTNDARMSFFGGEEGEEEENEPWRSLVTCVNDTYK--NHNPLI 185 Query: 190 GREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD 249 GRE+EL+R IQVLCR+ KNNPL VGE GVGKT++ GLA I +GDVP+ + C +Y +D Sbjct: 186 GREEELQRTIQVLCRKEKNNPLHVGEPGVGKTSLVYGLAAMIERGDVPQRLQGCRVYQMD 245 Query: 250 IGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP 309 +G++LAGT+YRGD EKR K ++ L ++ N+IL+IDEIH ++GAG + G +DA+N++KP Sbjct: 246 MGTMLAGTQYRGDLEKRIKQVMDGLLEEGNTILYIDEIHNLVGAGRSGEGSMDASNMLKP 305 Query: 310 LLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHH 369 L G +R IGSTTY E++ F K + RRFQ+ID+ EP+ EE ++I+NGLK +YE H Sbjct: 306 YLEGGDVRFIGSTTYAEYNRYFAKSAGIVRRFQQIDVPEPTPEEAIKILNGLKGQYEKFH 365 Query: 370 DVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESV 429 +VRY+ + AV + KY+NDRHLPDKAID+IDEAGA ++ P+ +++ V+ A + V Sbjct: 366 NVRYSPGVIEFAVRASAKYVNDRHLPDKAIDLIDEAGAYRQMHPLPTKRQKVDKALVSDV 425 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 + ++ ++ ++ + L L R+K ++GQ++A+E +T+AI+ A+AGL E KP+ Sbjct: 426 LTKVCKVQAVALKDDGNEALLTLEKRMKEQIYGQNQAVELVTQAIQTAKAGLTEEGKPLS 485 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 + LF GPTGVGKTEV L+ LGIEL+RFDMSEY E+H V++LIG+P GYVG++ GGLL Sbjct: 486 AMLFVGPTGVGKTEVARVLAHELGIELVRFDMSEYTEKHAVAKLIGSPAGYVGYEDGGLL 545 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGV 609 TDA+ K P+ VLLLDEIEKAH D++NILLQVMD LTDN G+KADFRNVVL+MT+NAG Sbjct: 546 TDAIRKIPNCVLLLDEIEKAHADIYNILLQVMDYARLTDNKGQKADFRNVVLIMTSNAGA 605 Query: 610 RETERKSIGLIHQDNSTDAME-EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVE 668 + + ++G + +AM ++KK F PEF NRL + F + + H ++ K I Sbjct: 606 QFASQANVGFASNVSRGEAMMVQVKKTFKPEFINRLSATVVFRDMDEAMAHLILKKKINA 665 Query: 669 LQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 LQ QL + V L + A N+L G+ GAR M RVI LK L E+LFG L G Sbjct: 666 LQQQLVARNVELTLDAAAENYLLRLGFTPLYGAREMDRVIAAQLKPLLTREMLFGKLKKG 725 Query: 729 GQVTV 733 G+ V Sbjct: 726 GKAIV 730 >UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMJ0_FIBSS Length = 838 Score = 580 bits (1495), Expect = e-164, Method: Compositional matrix adjust. Identities = 331/801 (41%), Positives = 486/801 (60%), Gaps = 85/801 (10%) Query: 23 EFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQP 80 + +TVEHLL L+ S A E L+A V+L L + ++ + ++ + Sbjct: 29 DCVTVEHLLFGLVREDSGVASETLKALKVNLTELSETIQRALSTNGGLMTVGGDSHGGLL 88 Query: 81 TLSFQ--RVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVS------RL 132 T + Q VL A + G + ++++AI + +S AA L + V+ L Sbjct: 89 TFTGQCKAVLYNAAKIAKEEGVQFIGPEHLMLAILQQTDSPAAATLSTYNVTFENYQEML 148 Query: 133 DVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER-----MENFTTNLNQLARVGGIDP 187 + + G DE +P + QA + R +E+F +L +AR G +DP Sbjct: 149 MQIKRQADGQPMDEGQPEDEPRERYTQTRQANPQSRSKTPILEHFGRDLTAMARAGKLDP 208 Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS 247 +IGRE E+ER IQ+LCRR+KNNP L+GE GVGKTAI EGLA +IVQ +P+++A+ + + Sbjct: 209 IIGREAEIERLIQILCRRKKNNPALIGEPGVGKTAIIEGLALKIVQRKIPDLLANKRVVT 268 Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGGQVDAANL 306 LD+ +++AGTKYRG FE+R K L+ +L++ NS ILFIDE+HTI+GAG S G +DA+N+ Sbjct: 269 LDVAAMVAGTKYRGQFEERVKGLIMELQRVGNSVILFIDELHTIVGAG-GSEGSLDASNI 327 Query: 307 IKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYE 366 KP L+ G+++ IG+TT+ E+ EKD AL RRFQ I + P++E+++QI+ GL+PKYE Sbjct: 328 FKPALARGELQCIGATTFDEYRKYIEKDPALERRFQTIIVNPPTVEDSIQILEGLRPKYE 387 Query: 367 AHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL----MP--------- 413 HH+V YT AVRAAVEL +YI++R LPDKAIDV+DEAGAR RL +P Sbjct: 388 QHHNVHYTPDAVRAAVELGERYISERFLPDKAIDVLDEAGARVRLNSIKIPQDLQNMEDE 447 Query: 414 ---------------------------------VSKRKKTVN-------VAD---IESVV 430 +++RKK + V D I V+ Sbjct: 448 LGVCLQKKEEAVANQDYTSAAQLRAREEELQNSIAERKKQLQSEESETPVVDDNVIRDVI 507 Query: 431 ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGS 490 +++ IP + + + L +LGD +K V GQD+A++A+ ++I+ +RAG+ + +P+GS Sbjct: 508 SKMTGIPVRRLGGEEAQKLIHLGDEIKQRVIGQDQAVDAIVKSIRRSRAGIRNNKRPMGS 567 Query: 491 FLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGF-DQG 546 FLF GPTGVGKTE+ L K L G E L+R DMSEYME+H+VSRLIGAPPGYVGF D G Sbjct: 568 FLFLGPTGVGKTELAKVLCKELFGSEDSLVRIDMSEYMEKHSVSRLIGAPPGYVGFEDGG 627 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G L++ V KHP++V+LLDEIEKAHPD++N+LLQ++D+G LTD+ GRK +F+N +++MT+N Sbjct: 628 GQLSEKVRKHPYSVVLLDEIEKAHPDIYNLLLQILDDGILTDSYGRKINFKNTIIIMTSN 687 Query: 607 AGVRETERKS-IGLIHQDNSTD-------AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 AG RE S +G + D EE+K++F+PEF NR+D I F LS + Sbjct: 688 AGAREVRHSSGMGFTKMGETDDYERMETAIREEVKRVFSPEFLNRVDEQIVFRALSKKDL 747 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 VVD + LQ L +G+ LE+SQEA+ ++ YD ++GARP+ R IQ+ ++ +A Sbjct: 748 VSVVDIQMGFLQKNLSDRGILLEMSQEAKEFVVNHNYDASLGARPIRRSIQNLVEDEIAE 807 Query: 719 ELLFGSLVDGGQVTVALDKEK 739 LL G++ D + V ++ K Sbjct: 808 GLLLGTMTDFSTIYVGVENGK 828 >UniRef50_D1PH53 ATP-dependent Clp protease, ATP-binding subunit ClpA n=1 Tax=Prevotella copri DSM 18205 RepID=D1PH53_9BACT Length = 761 Score = 578 bits (1489), Expect = e-163, Method: Compositional matrix adjust. Identities = 316/764 (41%), Positives = 474/764 (62%), Gaps = 29/764 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 L + + + ++ A +AR HEF+ EH+LLALL + +AL+ VD + ++L + Sbjct: 6 LTRYMSVLMDDAMKQARFFDHEFVMPEHMLLALLRQYAFCQALQEEGVDSFKMHEDLVGW 65 Query: 62 ------IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE 115 + +T LP +P+ F+ + A ++ R V + + A+F Sbjct: 66 LAKQERVPETIKYLP--------EPSSLFKTMFGTACALAAAADRQLVNVPHFVQAMFGL 117 Query: 116 QESQAAYLLRKHEVSR-----LDVVNFISHGTRKDEPTQS-------SDPGSQPNSEEQA 163 Q S+AA+LL K+ R V ++ G E D ++ + +E+ Sbjct: 118 QNSEAAFLLCKNVGDRQGEFLASVDSYYPIGEDTGEAGMGMGADFDDDDYANEYDDDEEE 177 Query: 164 GGEERMENFTTNLNQLA-RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTA 222 G + ++++ + ++ +V +PLIGRE+EL+R IQVLCR KNNPL +GE+GVGKTA Sbjct: 178 GRRQVVQDWHQLVTCISDKVEEHNPLIGREQELDRTIQVLCRAEKNNPLHIGEAGVGKTA 237 Query: 223 IAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL 282 + GLA I + VPE + IY +D+G +LAG +YRGDFEKR K +++ ++ N+I+ Sbjct: 238 LVYGLAKLINENQVPERLKGARIYGMDMGQMLAGAQYRGDFEKRIKMVMEGAVKEGNTII 297 Query: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342 +IDEIH +IGAG S G DA+N++K L +G IR IGSTTY+E++ + + + RRFQ Sbjct: 298 YIDEIHNMIGAGRGSDGGPDASNMLKQYLEAGDIRFIGSTTYEEYNRYMAQSKGIVRRFQ 357 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI 402 +IDI EP+ EE ++I+ GL+ KY H+V Y A+ AV + KYI++R LPDKAID++ Sbjct: 358 QIDIKEPTEEEAIKILEGLQYKYNKFHNVTYRKDALEYAVRASAKYISNRCLPDKAIDLM 417 Query: 403 DEAGARARLMPVSKRKKT-VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF 461 DEAGA + PV R+++ V + I+ ++ ++ +I ++ + D L L R+ ++ Sbjct: 418 DEAGAYLEVHPVESRQRSYVTKSIIQQILIKVCKIDAAAMKDENNDALATLRQRILDKIY 477 Query: 462 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDM 521 GQDKA++ + EA+ MA+AGL + KP+ S LF GPTGVGKTEV QL+K LGIEL+RFDM Sbjct: 478 GQDKAVDKVVEAVMMAKAGLTDDDKPLASLLFVGPTGVGKTEVARQLAKELGIELVRFDM 537 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM 581 SEY E+HTV++LIG+P GYVG++ GGLLTDA+ K P+ VLLLDEIEKAH D++NILLQVM Sbjct: 538 SEYTEKHTVAKLIGSPAGYVGYEDGGLLTDAIRKTPNCVLLLDEIEKAHSDIYNILLQVM 597 Query: 582 DNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-EEIKKIFTPEF 640 D LTDN G+KADFRNV+L+MT+NAG + R S+G + +AM ++KK F PEF Sbjct: 598 DYARLTDNKGQKADFRNVILIMTSNAGAQYASRASVGFNGNVSRGEAMLAQVKKTFKPEF 657 Query: 641 RNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMG 700 NRL +++ F+ + + ++ K + +L +L KGV++ ++ AR L + G+ + G Sbjct: 658 INRLSDMVVFNDMDKHMAELILAKKLRQLDAKLAAKGVTVTLTDAAREQLLKWGFTKEYG 717 Query: 701 ARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 AR M R I + LK L LLFG L GG+ V D ++ + Y Sbjct: 718 AREMDRAIGNRLKPILMKALLFGKLKKGGKAHVDFDGKELVVNY 761 >UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular organisms RepID=A9BF41_PETMO Length = 830 Score = 575 bits (1481), Expect = e-162, Method: Compositional matrix adjust. Identities = 305/734 (41%), Positives = 459/734 (62%), Gaps = 68/734 (9%) Query: 79 QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVS----RLDV 134 QPT +R+L+ A + G N++ ++L+ I E E A+++L++ ++ R ++ Sbjct: 80 QPTPRAKRILELAYDESELMGFNKIDAEHLLLGICREAEGIASHILKRSGINLTLMRKEL 139 Query: 135 VNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKE 194 + + G + + ++ +++E + T+L A +DP+IGRE E Sbjct: 140 TDMMIKGRSTGRMEIAKTEELEERKRQKQNALKQLEEYGTDLTAQAENRKLDPIIGREIE 199 Query: 195 LERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 + R +++L RR+KNNP+L+GE+GVGK+A+ EGLA RIV+G VPE++ + TI+SLDI S++ Sbjct: 200 INRIMEILARRKKNNPVLIGEAGVGKSAVVEGLAQRIVEGRVPEILKNKTIFSLDITSIV 259 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 AGTKYRG+FEKR K L++ L++ + ILFIDE+H I+ AGAA G +DAAN++KP L++G Sbjct: 260 AGTKYRGEFEKRMKKLMQILQKTEDIILFIDELHMIVEAGAAEGSSMDAANVLKPALANG 319 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT 374 +I VIGSTT E+ EKD AL RRFQKI +TEP+IEET+ I++G+K KYE HH V+Y Sbjct: 320 EITVIGSTTANEYRKFIEKDPALERRFQKIYVTEPTIEETINILSGIKFKYEEHHKVKYN 379 Query: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL----MPVSKRKKTVNVADIES-- 428 A+++AV+L+V+YI DRHLPDKAIDVIDEAGA+ARL +P + + +ADIES Sbjct: 380 HGAIQSAVQLSVRYITDRHLPDKAIDVIDEAGAKARLSALTLPDKLKIQYEKIADIESKR 439 Query: 429 ---------------------------------------------VVARIARIPEKSVSQ 443 +++ +P + + Sbjct: 440 NDPNSKENVEEKLKKMKEKYEEEYSKWRSEAENKIIQITEEDIAEIISNWTGVPLRQLRA 499 Query: 444 SDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTE 503 + + L NL L V GQD+AI+++ +AI+ AR+GL +P G F+F GPTGVGKTE Sbjct: 500 EEMEKLLNLEAVLHERVVGQDEAIKSVAKAIRRARSGLKDPRRPTGVFMFLGPTGVGKTE 559 Query: 504 VTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAV 560 + L+ L G E L+R DMSEYME+ +VSRL+GAPPGYVG+D+GG LT+ V + P++V Sbjct: 560 LAKTLATYLFGNETHLVRIDMSEYMEKFSVSRLVGAPPGYVGYDEGGQLTEIVRRRPYSV 619 Query: 561 LLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETE--RKSIG 618 +LLDEIEKAH DV+NILLQ+MD G LTD+ GR DFRN +++MT+N G + ++S+G Sbjct: 620 ILLDEIEKAHTDVYNILLQIMDEGRLTDSQGRTVDFRNTIIIMTSNLGSEQISKTKRSLG 679 Query: 619 LI--------HQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQ 670 + ++D M +K F PEF NRLD++I F L+ + + ++ + +L+ Sbjct: 680 FVEEGTIESEYKDIKEQVMSAVKAAFKPEFINRLDDVIVFHPLTKNQLKNIISIQLSDLK 739 Query: 671 VQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ 730 +L+++ ++L V + A ++L EKGYD GARP+ R IQ ++ PL+ ELL G +G + Sbjct: 740 SRLEERNLTLSVKESAIDFLLEKGYDSVFGARPLKRAIQRYIEDPLSEELLKGKYEEGDK 799 Query: 731 VTVALDKEKNELTY 744 + V K K L++ Sbjct: 800 ILVTHQKSKESLSF 813 >UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ClpA n=16 Tax=Campylobacter RepID=A7H2P9_CAMJD Length = 709 Score = 567 bits (1462), Expect = e-160, Method: Compositional matrix adjust. Identities = 297/720 (41%), Positives = 455/720 (63%), Gaps = 41/720 (5%) Query: 20 HRHEFMTVEHLLLALLS-NPSAREALEACS-VDLVALRQELEAFIEQTTPVLPASEEERD 77 + HEF+T EH+L ALL + ++ E S DL L EL+ I Q V+ +++ Sbjct: 21 NHHEFVTCEHVLFALLKLSTDFKDIFEEFSDGDLELLETELKNHISQNNKVI-----KQE 75 Query: 78 TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNF 137 +PT+S V+ + + + NE+ + L + + S ++YLL+KH ++ + Sbjct: 76 IEPTIS---VVLDEILLLSKNKNNEIKIIDFLEKLIQDSRSYSSYLLKKHNINLNKIQEL 132 Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 +H E Q+ + N T++L LA+ G IDPLIGR+ ELER Sbjct: 133 QNH-----ENIQN------------------LSNHTSDLTLLAQNGKIDPLIGRKFELER 169 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 +Q+L RR+KNNP+LVGE+GVGKTAI EGLA I + VP+ + + I+SLD+ S+LAGT Sbjct: 170 MMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIFSLDMASILAGT 229 Query: 258 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 KYRGDFEKR K +L +LE+ N+ILFIDEIHTI+GAG+ D +NL+KP LS+G ++ Sbjct: 230 KYRGDFEKRIKEILNELEKIPNAILFIDEIHTIVGAGSTGESHTDFSNLLKPALSNGTLK 289 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 IG+TT+ E+ N F+K++ L+RRF KI++ EPS EE++QI+ GLK KYE H ++ + Sbjct: 290 CIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGLKNKYEEFHHIKLNDEI 349 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 ++ AV K+ ND+ LPD AID++DE GA L P K KK N+ D+++V+A++ Sbjct: 350 LQYAVIWGKKFFNDKFLPDCAIDLVDELGASFALNP--KAKKNANLKDLKNVLAKMTH-H 406 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 K L NL LK +FGQD+ I++L ++K + AG + + P G FLF G + Sbjct: 407 HKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGFKNSNTPRGVFLFTGSS 466 Query: 498 GVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 GVGKTE+ L++ LG+ L RFDMSEY E+H +S+LIG+P GY+GF++GGLL++A+ K+P Sbjct: 467 GVGKTELCKALAEFLGLNLERFDMSEYAEKHAISKLIGSPAGYIGFEEGGLLSNAIRKNP 526 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI 617 +++L DEIEKAHPD+ N LQ+ DN LTDN+G K DF+N +++MT+N G++E+ + Sbjct: 527 FSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFKNTIIIMTSNLGLKESNE--L 584 Query: 618 GLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKG 677 G + + N + IK F PEF NR+D I+ F+ L+ ++ ++++K + E+ L+ Sbjct: 585 GFLSK-NEEKSNRAIKDFFAPEFINRIDKILHFNDLNDAILVKIIEKELDEISKNLNN-- 641 Query: 678 VSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDK 737 + L V +A+ +LA+K Y++ G R + R+I + + + +++E+LFG L GG + L K Sbjct: 642 IKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISDEILFGKLKKGGIAKIKLGK 701 >UniRef50_C8PIY8 ATP-dependent CLP protease ATP-binding subunit n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PIY8_9PROT Length = 793 Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust. Identities = 275/577 (47%), Positives = 406/577 (70%), Gaps = 9/577 (1%) Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 +T NLN++A G IDPLIGREKE+E+ +Q LCRR+KNNP+LVGE+GVGKTAI EG+A +I Sbjct: 206 YTANLNKIALEGKIDPLIGREKEIEKTLQTLCRRKKNNPILVGEAGVGKTAIIEGIALKI 265 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 V+G+VPE + + IY+LD G+L+AGT RG+FE+R K L+ + + N+ILFIDEIHTI+ Sbjct: 266 VRGEVPEKLKNKVIYALDAGALIAGTTLRGEFEERLKDLIDEFSANQNAILFIDEIHTIV 325 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 GAG + ++D +N++KP L+SG++ VIG+TTY E+ + F +D+AL+RRF KID++EPSI Sbjct: 326 GAGTGNRNELDMSNILKPSLASGELSVIGATTYGEYRS-FSQDKALSRRFCKIDVSEPSI 384 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 +++V+I+ G+ KYE H V+++ + +R +V LA KY +D+ LPD AID+IDE GA Sbjct: 385 DDSVEILKGVAKKYEEFHGVKFSDEILRDSVTLAKKYQSDKFLPDSAIDLIDEVGASFAF 444 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 P + ++ D+ + ++ A I S S ++ LKNL +K +FGQD+A+ +L Sbjct: 445 KP-HEAPLEISKDDLVNTLSISANIANLSSSVDNKQVLKNLEANIKREIFGQDEAVSSLC 503 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVS 531 +A+ + AGLG P+G FLFAG +GVGK+E+ L+ LG+ R+DMSEYME H+VS Sbjct: 504 KALLRSYAGLGGASSPIGVFLFAGSSGVGKSELAKVLAAQLGVHFERYDMSEYMEAHSVS 563 Query: 532 RLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 RLIGAPPGYVGF+ GG+LT+ + KHP++V+L DE+EKAHP + NI L + DN +LTDNNG Sbjct: 564 RLIGAPPGYVGFENGGILTNNIKKHPYSVILFDEVEKAHPSMTNIFLGIFDNASLTDNNG 623 Query: 592 RKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 DF+N +++M++N G +E + +G +D S IK F PEFRNR+D II F+ Sbjct: 624 VTTDFKNTIIIMSSNLGTKEAPQ--VGFT-KDESYKVDSAIKSFFAPEFRNRIDKIINFN 680 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 LS +++ ++VDK I EL+ QL K V + +++EA++ + +GY GAR + R I Sbjct: 681 RLSGEILEKIVDKTIGELESQL--KNVKISLNKEAKDLIISRGYSDEFGARNLKREISSQ 738 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 + ++ ELLFG+L +GG V+V++ + EL++ F S Sbjct: 739 ISDHISGELLFGALQEGGLVSVSV--KDGELSFSFAS 773 >UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 Tax=cellular organisms RepID=B0JIB9_MICAN Length = 795 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 316/765 (41%), Positives = 473/765 (61%), Gaps = 48/765 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL--EACSVDLVALRQELE 59 NQ+ ++ A AR H + EHLLL L+ +A AL + V L R+ +E Sbjct: 5 FNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDLKVTLHESRRLIE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + T P + T +++ ++A + G N + ++L+AI S+ ES Sbjct: 65 GMTGRGTGYSPV-----NIPFTPKAKKMFEQAFQEARQLGENAIATEHLLLAITSDPESL 119 Query: 120 AAYLLRKHEVSRLDVVNFI----SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 AA +L V + + + T SD Q N+ + GG + + N Sbjct: 120 AAKILIMQGVDLIKLRGLLIKNAGEKVASGRFTAKSDYEDQKNAPQ--GG--ILAQYGRN 175 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 LNQ + G IDP+IGRE E+ER +Q+L RR K+NP+L+GE GVGKTAIAEGLA RI GD Sbjct: 176 LNQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGEPGVGKTAIAEGLAQRIHNGD 235 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 +PE++ D + +LD+GSLLAGT++RGDFE+R K +++++ + N ILFIDEIHT++GAG+ Sbjct: 236 IPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKSGNIILFIDEIHTLVGAGS 295 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 GG +DA+NL+KP L+ G+++ +G+TT E+ E+D AL RRFQ + + EP+ E+ + Sbjct: 296 M-GGAMDASNLLKPALARGELQCLGATTLDEYKRHIERDAALERRFQPVMVGEPTKEQAI 354 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL---- 411 +I+ GLK YE H V+Y KA+ AAV L+ +YINDR LPDKAID++DEAG+R L Sbjct: 355 EILRGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRTHLRYSL 414 Query: 412 ---MPVSKRKKT-----------VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 P R+++ V+ +I +VA IP +++++ ++L NL +L Sbjct: 415 QSTSPAEVREESPLINPESLIPVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLH 474 Query: 458 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE- 515 + GQ +A+ A++ AI+ AR L + ++P+ SF+FAGPTGVGKTE+T L+K L G E Sbjct: 475 ERIIGQQEAVNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSES 534 Query: 516 -LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVF 574 ++R DMSE+ME HTVS+LIGAPPGY+G+++GG LT+AV + P+ V+L DEIEKAHPDVF Sbjct: 535 SMIRLDMSEFMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVF 594 Query: 575 NILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER--KSIGL---------IHQD 623 N+LLQ++++G LTD+ GR+ DF+N +++MT+N G + E+ S+G +Q Sbjct: 595 NLLLQLLEDGHLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQ 654 Query: 624 NSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS 683 S EE+K+ F PEF NRLD II F L+ + + Q+ D I +L QL +KG+S+EV+ Sbjct: 655 ISNRVTEELKQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVT 714 Query: 684 QEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 ++ + +GYD + GARP+ R + L+ LA +L G + G Sbjct: 715 AAFKDLVINEGYDPSYGARPLRRALTRRLEDSLAVAMLSGKVNSG 759 >UniRef50_A0RNV1 ATP-dependent Clp protease ATP-binding subunit ClpA n=2 Tax=Campylobacter fetus RepID=A0RNV1_CAMFF Length = 732 Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust. Identities = 301/773 (38%), Positives = 462/773 (59%), Gaps = 85/773 (10%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSV-DLVALRQELE 59 M+ L S+ A A HE++ VEH+L AL + + L + V D VALR +L Sbjct: 1 MIQNNLAKSIKQANELAISKSHEYIGVEHILYALTFDTEFLKTLSSLGVSDPVALRNDLV 60 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I+Q P E + T +L S E+ A + E +S Sbjct: 61 GLIDQ----FPRLESPKPPVLTYKLSEILS-------SIKEEEIFDAEDFLEEILEDKSS 109 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 +AY + K HG ++ D SQ F +NLN + Sbjct: 110 SAYQVLKF------------HGLNDEQ-----DDTSQ---------------FVSNLNDM 137 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 + IDP+IGRE+E+++A+++LCR +KNNP+ VGE+GVGKTAI +G+ +IV G VP+ Sbjct: 138 VKNSKIDPVIGREEEIQKALEILCRHKKNNPIFVGEAGVGKTAIVQGIVQKIVNGKVPDR 197 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + I++LD+ SL+AG KYRG+FE+R K+++ +L+++ N I+FIDEIH+I+ +++ Sbjct: 198 LKNSIIFNLDVSSLIAGAKYRGEFEERLKSIISKLKENKNHIIFIDEIHSIMSQNSSNEN 257 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D AN++KP L++G IR IG+TTY EF N F KD+AL RRF KID++EP+ +E I+ Sbjct: 258 SLDVANILKPHLANGDIRCIGATTYSEFRN-FNKDKALLRRFNKIDVSEPNPDECFLILK 316 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK--- 416 GLK YE H+V Y+ + ++ ++ELA +Y++D+ LPD AID+IDE GA+ + +K Sbjct: 317 GLKSTYEKFHNVTYSDEILKLSIELAKRYLSDKFLPDSAIDIIDETGAKLSIANPNKLNL 376 Query: 417 ------------------------------RKKTVNVADIESVVARIARIPEKSVSQSDR 446 KK V +DI + V+++A I + + + Sbjct: 377 KDETVWSYAINVDDEFDNLEAIKNEAEKNNSKKRVLKSDILNTVSKMANISNLNENSDNT 436 Query: 447 DTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTV 506 LKNL LK +FGQD AI+AL +A+ + AGL +KP+G FLF G +GVGK+E+ Sbjct: 437 KILKNLKANLKAKIFGQDSAIDALNDALISSYAGLNEPNKPIGIFLFTGSSGVGKSELAN 496 Query: 507 QLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI 566 +L+ +L + R+DMSEYME+H+VSRLIGAPPGY+GF+ GGLLT+ V KHP++V+L DEI Sbjct: 497 ELANSLNVHFERYDMSEYMEKHSVSRLIGAPPGYIGFESGGLLTNMVKKHPYSVILFDEI 556 Query: 567 EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST 626 EKA+ ++ NI LQ+ D+ +LTDN+G K+DF+N +++MT+N G +E ++G N + Sbjct: 557 EKANDEMINIFLQIFDSASLTDNSGNKSDFKNTIIIMTSNLGTKEP--NTLGF--NKNLS 612 Query: 627 DAMEE-IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQE 685 D ++ +K F+ EFRNR+D II F+ LS D++ ++V+K I L+ K + + +S++ Sbjct: 613 DKTDKAVKGFFSSEFRNRIDKIIRFNDLSKDILEKIVEKEISNLEKM--AKKIKINLSKK 670 Query: 686 ARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 A N + +G+ GAR + RVI+D++ ++ ELLFGSL GG+V + D E Sbjct: 671 ALNEIINQGFSDEYGARNLKRVIKDSINSSISKELLFGSLKRGGEVYIEFDGE 723 >UniRef50_C9KP02 Negative regulator of genetic competence ClpC/MecB n=3 Tax=cellular organisms RepID=C9KP02_9FIRM Length = 840 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 328/805 (40%), Positives = 471/805 (58%), Gaps = 94/805 (11%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTT 66 ++ A ARE +++ EH+LL LL A AL+A + A+ Q +EA + Sbjct: 14 AIEFAQYAARELEQDYIGTEHILLGLLHEEGSVAFAALQAAGLTFDAVMQRVEAMVAGD- 72 Query: 67 PVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRK 126 A + T +RV++ AV Q+ G N + ++L+++ E E AA LL Sbjct: 73 ----AEYPSDNPYYTPRAKRVMEGAVEEAQTLGHNYIGTEHILLSLLEETEGAAAELLIG 128 Query: 127 HEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER---MENFTTNLNQL 179 V + +V++ I H P D +P+ E+A G + ++ + NLN + Sbjct: 129 MGVDIDALQGEVLDRIDH------PHPEGD--GEPSRAEKAKGRQAPQLIKKYGRNLNDM 180 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ +DP+IGR+KE++R IQ+L RR KN P+L+GE GVGKTAIAEGLA RIV+G VP + Sbjct: 181 AKEDRMDPVIGRDKEIQRVIQILARRTKNTPILLGEPGVGKTAIAEGLAQRIVEGSVPYM 240 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D + SL + SL+AG KYRG+FE+R K L+ ++ QD ILFIDE+HT++GAGAA G Sbjct: 241 LQDKKVVSLSLASLVAGAKYRGEFEERLKGLIDEVRQDGTIILFIDEMHTLVGAGAAEGA 300 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP LS G+I++IG+TT E+ EKD AL+RRFQ I + EPSIE+ +I+ Sbjct: 301 -LDAANILKPALSRGEIQIIGATTLDEYKKHLEKDAALSRRFQTILVEEPSIEDAKKILM 359 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA------------ 407 GL+ KYEA H A+ AAV L+ +YI DR LPDKAID++DEA + Sbjct: 360 GLRGKYEAFHCAHIEDAAIEAAVRLSHRYITDRFLPDKAIDLMDEAASKVRMKQVAQPEK 419 Query: 408 ----RARLMPVS----------------------------------------KRKKTVNV 423 RARL + K + TV Sbjct: 420 LQEIRARLEKLGVEKEAAISAQDYERAARIRDDEQKVKDELEEAKRRFEKRGKSRITVTA 479 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 DI VVA+ +P + ++ + D L ++ L V GQ +A+EA+++AI+ ARAGL Sbjct: 480 DDIADVVAQWTGVPVRQIAAKESDRLLHMEKILTRRVVGQQEAVEAVSKAIRRARAGLKD 539 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGY 540 +P+GSFLF GPTGVGKTE+ LS+AL G E ++RFDMSEYME++ VSR++GAPPGY Sbjct: 540 PKRPIGSFLFLGPTGVGKTELAKALSEALFGTEDAIIRFDMSEYMEKYAVSRMVGAPPGY 599 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+++GG LTDAV + P++++LLDEIEKAHPDVFN+LLQV+D+G LTD GR DFRN V Sbjct: 600 VGYEEGGQLTDAVRRKPYSIILLDEIEKAHPDVFNVLLQVLDDGRLTDGKGRTVDFRNTV 659 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTD------------AMEEIKKIFTPEFRNRLDNII 648 ++MT+NAG ++ + L S D + E++ IF PEF NR+D +I Sbjct: 660 IIMTSNAGATLLKKSAPALGFAVGSGDEKQEAEDAAKKRVLGEVRHIFKPEFLNRIDELI 719 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F L + + +++D + +++ +L +K + LEVS A+N L EKG D GARP+ R I Sbjct: 720 VFHPLGREELSKIIDILLRDVRTRLAEKEIRLEVSPAAKNVLVEKGTDFKYGARPLKRAI 779 Query: 709 QDNLKKPLANELLFGSLVDGGQVTV 733 Q ++ +A LL G + V Sbjct: 780 QKLIEDEIAEHLLARDFKRGDTIQV 804 >UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY Length = 830 Score = 554 bits (1427), Expect = e-156, Method: Compositional matrix adjust. Identities = 320/825 (38%), Positives = 479/825 (58%), Gaps = 101/825 (12%) Query: 12 MAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQT---- 65 +A AR H ++ EH+LL L+ A +ALE+ + L A+RQ++E I Q Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAP 74 Query: 66 ---TPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 P P + ++VL+ ++ G N + ++L+ + E E AA Sbjct: 75 SGHIPFTPRA------------KKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQ 122 Query: 123 LLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 +L K R V+ + HG + EP + S ++ F NL Q Sbjct: 123 VLVKLGADLNRVRQQVIQLL-HGYQGKEPQAAGTAAESAPSTSLV-----LDQFGRNLTQ 176 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR G +DP+IGR+KE+ER +QVL RR KNNP+LVG+ GVGKTA+ EGLA +IV+G++PE Sbjct: 177 AAREGKLDPVIGRDKEIERVMQVLSRRTKNNPVLVGDPGVGKTAVVEGLAQKIVKGEIPE 236 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + D +Y+LD+G+L+AG++YRGDFE+R + +LK++ + ILFIDE+HT++GAGAA G Sbjct: 237 TLKDKQLYTLDLGALVAGSRYRGDFEERLRKVLKEIRSRGDIILFIDELHTLVGAGAAEG 296 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DAA+++KP+L+ G+++ IG+TT E+ EKD AL RRFQ I + EP+I T++I+ Sbjct: 297 A-IDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVEEPTISHTIEIL 355 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS--- 415 GL+ +YEAHH V T A+ AA +LA +YI+DR+LPDKAID+IDEAG+R R+ ++ Sbjct: 356 KGLRDRYEAHHRVSITDGALVAAAQLADRYISDRYLPDKAIDLIDEAGSRMRIRRMTAPP 415 Query: 416 -------------------------------------------KRKKTVNVADIESV--- 429 +++K D+++V Sbjct: 416 DLREFDEKIAKVRRDKEAAIDAQDFERAAALRDEEKRLQAQRAQKEKEWKAGDMDTVAEV 475 Query: 430 --------VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 +A IP +++ + L + + L V GQD AI+AL++AI+ RAGL Sbjct: 476 NEELIAEVLATATGIPVFRLTEEESSRLLRMEEELHKRVIGQDDAIKALSQAIRRTRAGL 535 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPP 538 +P GSF+FAGP+GVGKTE+ L++ L G E L++ DMSE+ME+HTVSRL G+PP Sbjct: 536 KDPKRPGGSFIFAGPSGVGKTELCKALAEFLFGDEDALIQLDMSEFMEKHTVSRLFGSPP 595 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+++GG LT+ V + P +V+L DEIEKAH D+FN LLQV++ G LTD GR DF+N Sbjct: 596 GYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHGDIFNSLLQVLEEGRLTDAQGRNVDFKN 655 Query: 599 VVLVMTTNAGVRETER-KSIGLIHQDNST---DAM-----EEIKKIFTPEFRNRLDNIIW 649 ++VMTTN G R+ + + +G D++ D M EE+K+ F PEF NR+D+ I Sbjct: 656 TIIVMTTNLGTRDISKGQPMGFARPDDTQTTYDRMKAKVNEELKQHFRPEFLNRVDDTIV 715 Query: 650 FDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 F L+ I +VD + L +L + + +EV A+ LAE+GYD +GARP+ R IQ Sbjct: 716 FHQLTQKEITAIVDLMVARLDERLKDRDMGIEVRPHAKKILAERGYDPVLGARPLRRTIQ 775 Query: 710 DNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKA 754 ++ L+ ++L+G L G V V + E + + F+ K +A Sbjct: 776 REIEDALSEKILYGELKSGQIVIVDAEGEGADAKFTFRGVPKPQA 820 >UniRef50_C7HWH6 Negative regulator of genetic competence MecB/clpC n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7HWH6_9FIRM Length = 803 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 317/792 (40%), Positives = 458/792 (57%), Gaps = 92/792 (11%) Query: 22 HEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQP 80 H+++ VEHLLLAL+ S A +ALE + LR + I + + V PA E Sbjct: 22 HDYIGVEHLLLALMKTGSLATKALEEAGANYELLRSIVINNIGKGSAVRPAKEYSN---- 77 Query: 81 TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISH 140 +++ RA Q + + ++L+AI ++ +S + +S LD + Sbjct: 78 --KVRQIFDRARLFAQKRKKVSASEEDILLAILNDDDSFTNLMFM---LSGLDKKIIRDN 132 Query: 141 GTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQ 200 R +SS+ + + E ++ F NLN++A G IDP+IGRE E+ER IQ Sbjct: 133 LIRLQNEEKSSNTSNNLS--------ENLKKFAKNLNEMAEAGKIDPVIGREDEVERVIQ 184 Query: 201 VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYR 260 +L RR KNNP+L+G+ GVGKTAI EGLA RIV G VP VM + TI SLD+ S++AGTKYR Sbjct: 185 ILLRRTKNNPILIGDPGVGKTAIIEGLAQRIVDGKVPFVMKEKTIVSLDLASMIAGTKYR 244 Query: 261 GDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIG 320 GDFE R K L +LEQ + +LFIDE H ++GAG AS G +DAAN++KP+L+ G I++IG Sbjct: 245 GDFEDRLKKLFGELEQREDVVLFIDEFHMVLGAG-ASEGSMDAANILKPILAKGDIQIIG 303 Query: 321 STTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRA 380 +TT E+ EKD+AL RR Q + + EP+ ++T++II GLK KYE HH V T +A++A Sbjct: 304 ATTIDEYRKHVEKDQALTRRMQPVHVEEPNKDDTIKIIEGLKDKYEDHHKVEITGEAIKA 363 Query: 381 AVELAVKYINDRHLPDKAIDVIDEAGARARLMP-----------------VSKRKKTVNV 423 AV+L+ +YI DR LPDKAIDVIDEA ++ R+ + ++ + +N Sbjct: 364 AVDLSQRYIQDRFLPDKAIDVIDEACSKERIKNYKENKDQVSNKEILDGLIEEKNQAINE 423 Query: 424 ADIESV-------------------------------VARI----ARIPEKSVSQSDRDT 448 + E VA+I +++P +++ ++ Sbjct: 424 QNFEKAASLRDQINEAREKLEKEKEEKKTDLKISFDEVAKIVSSWSKVPITKLTEDEKQK 483 Query: 449 LKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL 508 +L LK V GQDKAI+ ++ AIK AR GL KP+GSF+F GPTGVGKT + L Sbjct: 484 YMDLDIDLKKEVIGQDKAIDKISHAIKRARVGLKDPKKPIGSFIFVGPTGVGKTYLAKSL 543 Query: 509 SKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDE 565 +K L + L+R DMSEYME+ VSRL+G+PPGYVG+++GG LT+AV KHP++V+L DE Sbjct: 544 AKNLFGDMDNLIRMDMSEYMEKFAVSRLVGSPPGYVGYEEGGQLTEAVRKHPYSVILFDE 603 Query: 566 IEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE-TERKSIGL----- 619 IEKAHPD+FN+LLQ++D+G LTD GR DF+N +++MT+N GV + IG Sbjct: 604 IEKAHPDIFNLLLQILDDGRLTDGQGRTVDFKNTIIIMTSNVGVSSLNQNPKIGFGTGDV 663 Query: 620 ---IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK 676 I N + IK F PEF NRLD+II F+ L + I ++ + E + +L Sbjct: 664 EKEIDDSNKEIINKAIKNAFAPEFLNRLDDIIMFNSLDKNAIKEITKILLDETKERLKNL 723 Query: 677 GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSL---------VD 727 G+ + ++ + L+E G+ + GARP+ R I + + LA E+L G L V Sbjct: 724 GIEINYNKRVVDLLSEGGFSKEYGARPLERHITNKIDNQLAEEILEGKLSKDMKINLTVK 783 Query: 728 GGQVTVALDKEK 739 G++ A KEK Sbjct: 784 EGKINFANKKEK 795 >UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Neorickettsia RepID=C6V4H7_NEORI Length = 740 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 289/727 (39%), Positives = 437/727 (60%), Gaps = 10/727 (1%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 M++ LE +L A AR H ++T+EHLLLAL + S++ LR L Sbjct: 1 MISPSLENTLQNALVLARSFSHSYVTLEHLLLALTEDEEVSRIASNSSMNFAKLRDSLIH 60 Query: 61 FIEQTTPVLPASEEERDT---QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQE 117 F+ S D +PTL +RV+QR H + ++TG +VL+ +F EQ+ Sbjct: 61 FLSTAQFFARFSNGCVDIAKIKPTLGLRRVIQRTKIHANIAELGQITGLHVLIELFCEQD 120 Query: 118 SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 S A L + S + +V +SH R + + + ++ + ++ + T++N Sbjct: 121 SYAFSFLTE---SNITLVELMSHVMRSHKCGSTQSTSTSNTDILRSADLDNLKEYCTDMN 177 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 +LA G ID LI R+KE+ER I++L RR KNNP+ VGE GVGKTAI EGL IV G+VP Sbjct: 178 ELAIQGKIDKLIDRKKEIERTIEILLRRTKNNPIYVGEPGVGKTAIVEGLVHAIVSGNVP 237 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + + + +Y+L IGSLLAGT+YRGDFE+R + ++ ++ N+ILFIDEIHTI+GAG+ S Sbjct: 238 QKLKNTRVYALKIGSLLAGTRYRGDFEERIRTVMNEISSSKNTILFIDEIHTIVGAGSTS 297 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DA NL+KP L+ G +R IG+TTY+E+S FEKD AL RRFQ+I+I EPSI +T+ I Sbjct: 298 NGSIDAGNLLKPFLTKGPLRCIGATTYREYSTHFEKDAALDRRFQRIEIEEPSISDTLNI 357 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA--RARLMPVS 415 I+G K YE H V YT ++ V LA +YI +R PDKAID++D+ GA A L V Sbjct: 358 IDGTKSYYEDFHRVHYTKASLNEIVNLAHRYIPNRSFPDKAIDLMDDLGASYNAELFDVK 417 Query: 416 KRK-KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 KR+ + +++ + +A+ IP ++ + + L +L LK +F QD IE + ++ Sbjct: 418 KRRDRKIDIKYVRETLAKRFNIPVAQLNYTVEEILTSLERNLKTAIFDQDNVIEQVVYSL 477 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 534 + GL E KP+ S+LF G TGVGKTE+ Q++K L ++ +R DMSEYME H VSRLI Sbjct: 478 RPGLLGLKGE-KPLASYLFGGSTGVGKTELAKQIAKNLCMQFVRIDMSEYMEGHAVSRLI 536 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG D+G + + + K +++L DEIEKAH D NILLQ++D G +TD+ G+K+ Sbjct: 537 GAPPGYVGHDKGSFIAEILFKQGSSLILFDEIEKAHADFQNILLQILDYGCITDSTGKKS 596 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 F+N ++V TTN G E S+G T + F E +RLD I F+ L Sbjct: 597 RFKNCIMVCTTNVGSTFIENNSLGFTQDGKKTGKEAQFASFFNKELLDRLDLAIVFNTLD 656 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + + ++++K E++ L+++G+ L ++ E L + + AR + R I++++ + Sbjct: 657 KNSVEKIINKSATEIRALLEERGIKLSLTDEVVKSLVARHSSGKISARTIERTIRNDIMQ 716 Query: 715 PLANELL 721 +++ +L Sbjct: 717 AVSDRML 723 >UniRef50_Q9ZN31 ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT n=17 Tax=Helicobacter RepID=Q9ZN31_HELPJ Length = 742 Score = 547 bits (1410), Expect = e-154, Method: Compositional matrix adjust. Identities = 294/754 (38%), Positives = 467/754 (61%), Gaps = 21/754 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVD-LVALRQELEA 60 N++L L+ A A + H T EH+LLA+L + D + Q L+ Sbjct: 4 FNKDLNEVLSHALDLALDFNHVLCTTEHVLLAILEHGIGIRIFNTLEEDGYHKMEQILKD 63 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +++Q P+ + D P L+ RV ++ + +S + V +L+ I + A Sbjct: 64 YLQQYIPLKNDPTKIPDRSPVLA--RVFKK----MYASYLDSVGVEELLIFILEYDDCYA 117 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 + LL ++R ++ + + E+A ++ +T NL+ LA Sbjct: 118 SKLLDSFGITR----SYFKSALLDFDNPNDI--NDNDINNEEAPKSTPLKKYTKNLSALA 171 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + +DP+IGRE+E+ R I++L RR+KNNPLL+GE+GVGKT+IAE LA +I Q +VPE + Sbjct: 172 QNNALDPVIGREEEILRVIEILGRRKKNNPLLIGEAGVGKTSIAEALALKIAQKEVPEFL 231 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + +YSLD+ ++AG KYRGDFEKR K LK+++Q+ ILFIDEIHT++GAG+++ G Sbjct: 232 QEYEVYSLDLALMVAGAKYRGDFEKRLKKTLKEIQQNGRIILFIDEIHTLLGAGSSNAGS 291 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DAAN++KP+L+ G ++ +G+TT++E+ ++FEKD+A RRF +++ EPS E I+ Sbjct: 292 LDAANILKPVLTDGSLKCLGATTFEEYRSVFEKDKAFNRRFSIVNVEEPSKEACYLILKN 351 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 + P YE HH VRY +A V+L Y++D+ LPDKAI+++DE G+R ++ K+ K Sbjct: 352 IAPLYEEHHQVRYNESVFKACVDLTSYYMHDKFLPDKAIELLDEVGSRKKIN--PKKGKK 409 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 ++V D++ +A +IP+ ++ + L+NL LK +F Q +AI ++ AIK+ G Sbjct: 410 ISVDDVQETLALKLKIPKMRLNSDKKALLRNLEKSLKNKIFAQTEAINLVSNAIKIQHCG 469 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 L ++KPVGSFLF GP+GVGKTE+ +L+ L + RFDMSEY E H+V++LIG+P GY Sbjct: 470 LSAKNKPVGSFLFVGPSGVGKTELAKELALNLNLHFERFDMSEYKEAHSVAKLIGSPSGY 529 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VGF+QGGLL +A+ KHPH +LLLDEIEKAHP+V+++LLQVMDN TL+DN G KA F++V+ Sbjct: 530 VGFEQGGLLVNAIKKHPHCLLLLDEIEKAHPNVYDLLLQVMDNATLSDNLGNKASFKHVI 589 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L+MT+N G + ++ ++G N+ +K++ TPE R+R+D I+ F+ LS + + Sbjct: 590 LIMTSNVGSK--DKDTLGFFSTKNAKYD-RAVKELLTPELRSRIDAIVPFNALSLEDFER 646 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +V + +L+ ++GV L+ +E +A+K Y +GAR + ++I + +K L++ L Sbjct: 647 IVSVELDKLKALALEQGVILKFHKEVVKCIAQKSYQTTLGAREIKKIIHNEIKTQLSDIL 706 Query: 721 LFGSLVDGGQVTVALDKEKNELTYG-FQSAQKHK 753 L S ++ L EKN+L + AQK K Sbjct: 707 LLQSFKKPCKIACLL--EKNQLVLKEIKRAQKVK 738 >UniRef50_D1Y107 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y107_9BACT Length = 774 Score = 544 bits (1402), Expect = e-153, Method: Compositional matrix adjust. Identities = 302/747 (40%), Positives = 459/747 (61%), Gaps = 49/747 (6%) Query: 22 HEFMTVEHLLLALLSNPSAREAL---------EACSVDLVALRQELEAFIEQTTPV-LPA 71 H F+ EHL++ L++ S+ AL E + +++ALR + + PV LP Sbjct: 25 HAFIGTEHLMIGLIAEESSVAALALKEAGLAAEDVAREILALRPPAAPYAQ---PVDLPL 81 Query: 72 SEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSR 131 S+ R VL A+ + + V ++L+ + S E A + L + Sbjct: 82 SDRARG---------VLNAAIHLARELHSSYVGTEHLLLGVLSAPECTACHALAELG--- 129 Query: 132 LDVVNF--------ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 LD N ++ +R++ + ++P ++ + ++ + +L A G Sbjct: 130 LDTENLRVSLKKQLLAQSSRQEAENDKENGDARPAADVKT---PTLDKYCVDLTAKAAKG 186 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 +DPLIGRE+E+ R +Q+LCRRRKNNP+LVG+ GVGKTAI EGLA++I +G P ++ Sbjct: 187 ELDPLIGREQEMHRMMQILCRRRKNNPVLVGDPGVGKTAIVEGLAYKIQKGSAPSLLKGK 246 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 + L +G+L+AGTKYRG+FE R K ++ +L N ILFIDE+HT++GAG+A G +DA Sbjct: 247 RVVELTMGTLVAGTKYRGEFEDRMKKIVDELTAAKNVILFIDELHTVVGAGSAE-GSLDA 305 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP 363 AN++KP L+ G+ +VIG+TT E++ EKD AL RRFQ + + EP + + I+ GLK Sbjct: 306 ANILKPSLARGEFQVIGATTRDEYTKNIEKDAALERRFQPVAVGEPDQDAALAILQGLKE 365 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK---T 420 YE HH VRYT A+ AAV L+ +Y++DR LPDKAID+IDEAGA+ RL ++ T Sbjct: 366 SYEKHHSVRYTEGALEAAVRLSSRYLSDRSLPDKAIDLIDEAGAKVRLDLDGRQIPEGLT 425 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ ++ V++ + IP K++++ + L L + + GQD+A+ AL A++ +R+G Sbjct: 426 VDEEEVAGVLSEWSGIPVKTLTEHEAQRLLRLESEIHQRLVGQDEAVSALCRAVRRSRSG 485 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAP 537 L +PVGSFLF GP+GVGKTE+ L++AL G E LL FDMSEYMERH ++LIGAP Sbjct: 486 LKDPRRPVGSFLFLGPSGVGKTELARCLARALFGSEKALLAFDMSEYMERHEAAKLIGAP 545 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+D+ G LT+AV +HP +V+L DEIEKA+PDVFN+LLQ+++ G LTD +GR DF+ Sbjct: 546 PGYVGYDEEGRLTEAVRRHPWSVVLFDEIEKANPDVFNLLLQILEEGRLTDAHGRTVDFK 605 Query: 598 NVVLVMTTNAGVRETERKSIGLI------HQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 N V++MT+N GVRET + +G + S + +K+ F PEF NR+D + F Sbjct: 606 NTVVIMTSNLGVRETAKAGLGFSASAEAEKKKQSEAVLGAVKEFFRPEFLNRVDAQLVFH 665 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 LS + + +V D + +L+ +L + G+ L ++++AR +L + GARP+ R+IQ Sbjct: 666 PLSAEEMTRVFDIMMFDLRARLGEHGIILSMAKDAREFLLRAAAAQNQGARPLRRLIQTK 725 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKE 738 ++ PL++ +L G + DG V LD E Sbjct: 726 IEDPLSDLILSGEVPDGSTVDCVLDGE 752 >UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomycetales RepID=C7PZ63_CATAD Length = 841 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 306/776 (39%), Positives = 456/776 (58%), Gaps = 84/776 (10%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVL 69 ++ A RA + + EHLL A R L A +VD L Q ++ L Sbjct: 51 ISTASQRAGQDGSSDLDTEHLLWAATQVEPTRGILAAANVDPDRLAQTIKK-------SL 103 Query: 70 PASEEERDTQPTLS--FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKH 127 PAS +P L+ +RVL RA +SSG + ++L A+ +Q+S A ++L Sbjct: 104 PASGSTPSAEPGLTPAAKRVLMRAHELSRSSGSTYIGPQHILAALTEDQDSGAGHVLNTT 163 Query: 128 EVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDP 187 +V D+ I+ +R + P EQ ++ + ++ + A+ G +DP Sbjct: 164 QVDAKDLGKRITKASRAE---------GMPTGPEQPSDTPTLDEYGRDMTEDAKAGKLDP 214 Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS 247 ++GR E+E+ ++VL RR KNNP+L+G+ GVGKTAI EGLA RIV GDVP + + Sbjct: 215 VVGRADEIEQTVEVLSRRTKNNPVLIGDPGVGKTAIVEGLAQRIVSGDVPTTLEGKRVVM 274 Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGGQVDAANL 306 LD+ +L+AG+KYRG+FE+R K ++ ++ + +S ILFIDE+HT++GAG+ G +DA N+ Sbjct: 275 LDLAALVAGSKYRGEFEERLKNVIDEVGKAADSTILFIDELHTVVGAGSGGEGSMDAGNI 334 Query: 307 IKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYE 366 +KP LS G++ VIG+TT E+ EKD AL RRFQ + I EP++EET++I+ GL+ +YE Sbjct: 335 MKPALSRGELNVIGATTIDEYRKNIEKDAALERRFQPVLIAEPTVEETIEILEGLRDRYE 394 Query: 367 AHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK---------- 416 AHH V++T +A+ AA ++ +YI+DR LPDKAID+ID+AGAR RL + K Sbjct: 395 AHHGVKFTDEALAAAALMSDRYISDRFLPDKAIDLIDQAGARIRLRNLGKSTEAIEREDK 454 Query: 417 ----------------------------------------RKKTVNVA--DIESVVARIA 434 R+ T+ V DI VV+R Sbjct: 455 LAKLTRERDEAVSAENYDRAKDLKARIEELNDEVATIEERREGTLKVTEKDIAEVVSRRT 514 Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 IP +++ +R L L D L V GQ++A+ A+ EA++ +RAG+G ++P GSFLF Sbjct: 515 GIPVAQLNEDERTRLLKLEDALHDRVVGQEEAVTAIAEAVRRSRAGMGDPNRPTGSFLFL 574 Query: 495 GPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD 551 GPTGVGKTE+ L++ L G E L+RFDMSE+ E+HTVSRL+G+PPGYVG+++ G LT+ Sbjct: 575 GPTGVGKTELAKALAELLFGDEDRLIRFDMSEFQEKHTVSRLLGSPPGYVGYEEAGQLTE 634 Query: 552 AVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE 611 V + P++V+L DE+EKAHPD+FN LLQV+D+G LTD GR DFR+ V++MT+N G Sbjct: 635 RVRRKPYSVILFDEVEKAHPDIFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNIG--- 691 Query: 612 TERKSIGLIHQDNSTDA----MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 + L H ++ + M++++ F PEF NRLD ++ F L + +VD + Sbjct: 692 ---SQLILAHMGDTDEIRDQLMDQVRSFFPPEFINRLDEVVIFHSLGKPEMGNIVDLMLD 748 Query: 668 ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFG 723 + +L + + LEV+++A+NWL E+GY GARP+ R IQ L +A LL G Sbjct: 749 SSRRRLKAQELGLEVTEKAKNWLVERGYKPEFGARPLRRTIQSELDNKVATLLLSG 804 >UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogaceae RepID=A5IMI3_THEP1 Length = 791 Score = 537 bits (1384), Expect = e-151, Method: Compositional matrix adjust. Identities = 306/793 (38%), Positives = 477/793 (60%), Gaps = 80/793 (10%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEAF 61 Q++ +S+ R R+++ ++ EH+LLA+L N E L+ +VD+ L+ E+E F Sbjct: 12 QKVMMSIQDIMTRYRQNQ---LSSEHILLAILEEGNNVGVELLKELNVDINRLKDEVEVF 68 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 I + +P T + V+++A + G +++ ++++ + +S A Sbjct: 69 IGKYGVRVPEGASVSQIFITPDARHVIEKAREEARRMGDSKIGTEHLILGMVLSPDSTAF 128 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 +L ++ V+ V I RK T +D +A E + FT +L QLAR Sbjct: 129 RILSRYGVTPERVYEAI----RKIRSTGKTD---------EAENVEALARFTMDLTQLAR 175 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 + P++ REKE+ R IQ+L RR KNNP+L+G+ GVGKTA+ EGLA RIV+G VP + Sbjct: 176 EKKLMPVVDREKEIRRVIQILSRRTKNNPVLIGDPGVGKTAVVEGLAQRIVEGKVPLFLR 235 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGGQ 300 + + LD+G L+AGT++RGDFE+R K LL +L++ ILFIDE+HT++GAGAA G Sbjct: 236 NVRVLKLDMGRLVAGTRFRGDFEERLKRLLDELKRKKGEVILFIDEVHTVVGAGAAEGA- 294 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DAAN++KP L++G+I++IG+TT +E+ EKDRAL RRFQ + + EP++E+T++I+ G Sbjct: 295 LDAANIMKPELTTGEIQIIGATTVEEYRKYIEKDRALERRFQPVIVEEPTVEQTIEILKG 354 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL---MPV--- 414 L+ +E HH V+ T A+ A +L+ +YI +R LPDKA+D+IDEA A RL P Sbjct: 355 LRKVFEEHHHVKITDDALETAAKLSARYITNRFLPDKAVDLIDEAAAYVRLESSYPSEEL 414 Query: 415 -----------------------------------------SKRKKTVNVADI--ESVVA 431 KRKK V + E+VVA Sbjct: 415 LKLEEEIKNLEEKINDAVVKGEYEEAAKLKVELQRLKNEYEEKRKKQEKVEPVVDENVVA 474 Query: 432 RIAR----IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 RI IP + +S+R+ L L + + + Q++A++ + I+ AR G+ + +P Sbjct: 475 RIVEQWTGIPVSRIMESEREKLLKLEEFIHQRLVNQEEAVKIVARTIRRARVGIKNPRRP 534 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 +G FLF GPTGVGKTE+ L+ L G E ++R DMSEYME+H+V+RLIGAPPGYVG++ Sbjct: 535 IGVFLFLGPTGVGKTELARTLADVLFGSEDAMIRLDMSEYMEKHSVARLIGAPPGYVGYE 594 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 +GG LT+AV K P++V+LLDEIEKAHPDVFNILLQV ++G LTD G DFRN +++MT Sbjct: 595 EGGQLTEAVRKRPYSVILLDEIEKAHPDVFNILLQVFEDGRLTDGKGNTVDFRNTIIIMT 654 Query: 605 TNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 +N G K + + + E++ F PEF NR+D I++F L+ + + ++V+ Sbjct: 655 SNIG----SEKILEMSENGVRIEIERELRNTFKPEFLNRIDAIVYFKPLTMEEVKKIVEI 710 Query: 665 FIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 + +LQ L +K +S+E+++ A+++LAE GY ++GARP+ R+I+ L+ +A+++L G Sbjct: 711 MVRQLQEILKEKNISIELTERAKDYLAEAGYVPSLGARPLRRIIELELESMIADKILEGE 770 Query: 725 LVDGGQVTVALDK 737 + +G +V V D+ Sbjct: 771 IKEGDRVLVDADE 783 >UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPJ8_9FIRM Length = 794 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 313/781 (40%), Positives = 446/781 (57%), Gaps = 85/781 (10%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTT 66 +LN A A H ++ EH+L L + A L V ++ + A I + Sbjct: 13 ALNCALTCAMSMGHTYVGSEHILYGLCGSNGGVAYTVLRQSGVTCNSIASRINALIGKGL 72 Query: 67 PVLPASEEERDTQPTLS-----FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 P TQ T+S +R+L+ AV +++G+ ++L AI + E A+ Sbjct: 73 P----------TQLTVSDFTPRSRRILESAVMIARNAGKTAAGTDHILRAIMRDNECYAS 122 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 L + +S V++ + T+K+ P + P++ + + NL LA+ Sbjct: 123 VFLHEMGISGEAVLDQGAD-TQKNTPQGKRNGSVLPSA---------LSGYGRNLTMLAQ 172 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G IDP GRE+E R I++L RR KNNP LVGE+GVGKTAIAEGLA +I G+VP+ + Sbjct: 173 EGKIDPCFGRERETNRVIEILLRRSKNNPCLVGEAGVGKTAIAEGLAMKIAGGNVPDELK 232 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 IY LDI S+LAG KYRGDFE+R K + ++ D N I+FIDEIH I+GAGAA G + Sbjct: 233 TKKIYMLDITSMLAGAKYRGDFEERLKRVFDEIRNDGNIIVFIDEIHNIVGAGAAEGA-I 291 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DAAN++KP+L+ G+IR+IG+TT E+ EKD AL RR Q + + EP+ EETV I+NGL Sbjct: 292 DAANILKPMLARGEIRLIGATTNAEYKKYIEKDPALERRLQPVTVNEPTEEETVTILNGL 351 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM-----PVSK 416 + +YE++H V+ T +A+ AAV L+V+YINDR LPDKAID+IDE A+ RL V K Sbjct: 352 RCRYESYHKVKITDEAISAAVGLSVRYINDRFLPDKAIDLIDEGSAKIRLSRSGEDSVGK 411 Query: 417 RKK-------------------------------------TVNVADIESVVARIARIPEK 439 + K T+ DI VV + IP Sbjct: 412 KLKKLSDEKIRAINNKDFALALKLREQEKTLCANNGGYTATLTADDIADVVTQYTGIP-- 469 Query: 440 SVSQSDRDTLKNLGDRLKML---VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGP 496 V + DT K L K L V GQ+KA+ A+ A++ R+GL EH+PVGSF+F G Sbjct: 470 -VRYNGNDTTKWLACLEKTLSENVIGQEKAVRAVANAVRRGRSGLSDEHRPVGSFIFLGT 528 Query: 497 TGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAV 553 TGVGKT+ +L+KAL G E L+RFDMSEY E+H+VS+LIGAP GYVG++ GG LTD V Sbjct: 529 TGVGKTKCCKELAKALFGTEKALIRFDMSEYSEKHSVSKLIGAPAGYVGYEDGGRLTDRV 588 Query: 554 IKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG----V 609 K P++V+L DEIEKAHPDVF+ILLQV+D+G LTD+ GR DF N V++MT N G Sbjct: 589 RKSPYSVVLFDEIEKAHPDVFDILLQVLDDGRLTDSGGRTVDFTNTVIIMTGNIGSALIA 648 Query: 610 RETERKSIGLIHQDNSTDAM--EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 + R G+ + + E++K F PEF R+D ++ F+ LS + +K + Sbjct: 649 KGKSRLGFGIQQRQEEISGLVKGELEKYFRPEFLGRVDEVVVFNELSCAEYKLICEKMLS 708 Query: 668 ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVD 727 EL Q +++G++ S+ L + R GARP+A++I N++ +++ ++ G Sbjct: 709 ELSKQCERQGIAFSWSERLSEKLCAEAKSRNEGARPIAKLIDKNVRNMISDGIISGEFST 768 Query: 728 G 728 G Sbjct: 769 G 769 >UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Tax=Bacteria RepID=Q1WVA6_LACS1 Length = 830 Score = 535 bits (1377), Expect = e-150, Method: Compositional matrix adjust. Identities = 312/802 (38%), Positives = 476/802 (59%), Gaps = 78/802 (9%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEAFIEQTTP 67 L +A +A +H+ + EHLLLAL N A + L++ V V +R+E+E + Sbjct: 15 LVLAQQQANYFKHQAIGTEHLLLALTMEKNGVAAKVLQSFVVTEVDVREEIEHIVGYGNL 74 Query: 68 VLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKH 127 ++ P + VL+RA H + +V ++L+A+ + ++ ++ +L Sbjct: 75 QRRGADTYLPYSPRTRY--VLERAREHAKLFNVEKVGTEHILLALLEDDKTISSRILAAL 132 Query: 128 EVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEE-QAGGEERMENFTTNLNQLARVGGID 186 + V N D T + SE+ Q G ++ +L ++ R ID Sbjct: 133 NIDLRKVKNITYRTMGVDATTANRTRKKLALSEKKQDNGTPTLDELARDLTEMVRKDQID 192 Query: 187 PLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIY 246 P++GR+ E++R +Q+L RR KNNP+L+GE GVGKTA+AEG + +IV G+VP+ + + + Sbjct: 193 PVVGRDNEIKRVVQILSRRTKNNPVLLGEPGVGKTAVAEGFSQKIVNGEVPDNLKNKRVM 252 Query: 247 SLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANL 306 LD+GSL+AGTKYRG+FE R K +++++ +D N ILFIDE+HT+IGAG A G +DA+N+ Sbjct: 253 MLDMGSLVAGTKYRGEFEDRLKKIIEEIREDGNVILFIDEMHTLIGAGGAEGA-IDASNI 311 Query: 307 IKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYE 366 +KP L+ G+++VIG+TT E+ E D AL RRF + I EP+ E + I+ GL+PKYE Sbjct: 312 LKPALARGEVQVIGATTLNEYQKYVEADAALERRFASVTINEPTPEVALTILKGLRPKYE 371 Query: 367 AHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNV--- 423 HH ++ T +A+ +AV+L+ +YI R LPDKAID++DEA AR R+ K K + Sbjct: 372 KHHQLQITDEALESAVKLSKRYIASRFLPDKAIDLMDEAAARVRINNAQKVDKVSAIKKK 431 Query: 424 --------------------ADIESVVARIARIPEKSVSQSDRD-----------TLKNL 452 A+I + +I EK + Q D+D T +++ Sbjct: 432 LSELSQEKTEALLKEDFEKAAEIRNEELKIQEKLEKQI-QRDKDEEDSNNYRVKVTAEDI 490 Query: 453 -------------------GDRLKML-------VFGQDKAIEALTEAIKMARAGLGHEHK 486 GDRL L V GQD+A++A+++AI+ AR+GL + Sbjct: 491 AEVVSEWTGVPVTQINRSEGDRLIRLEKILHNRVIGQDEAVKAVSKAIRRARSGLKDPTR 550 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGF 543 P+GSF+F GPTGVGKTE+ L++A+ G E ++R DMSEYME++T SRLIG+PPGYVG+ Sbjct: 551 PIGSFMFLGPTGVGKTELAKALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSPPGYVGY 610 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 D+GG LT+ V +P++V+LLDE+EKAH DVFNILLQV+D+G LTD+ GRK DFRN +++M Sbjct: 611 DEGGQLTEKVRNNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIM 670 Query: 604 TTNAGVRET-ERKSIGLIHQDNSTD--AM-----EEIKKIFTPEFRNRLDNIIWFDHLST 655 T+N G + KS+G +D S D AM E +KK F PEF NRLD I+ F L+ Sbjct: 671 TSNLGATALRDEKSVGFGAKDVSDDYEAMAAKVRETLKKTFRPEFLNRLDEIVVFHSLNK 730 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 + IHQ+V + ++ ++ ++L+++ A + +AE G+D GARP+ R++QD ++ Sbjct: 731 EEIHQIVKLMAKNIIDRIKEQNINLKITPAAIDIVAEAGFDAEYGARPIRRILQDKIEDL 790 Query: 716 LANELLFGSLVDGGQVTVALDK 737 L+ ELL G++ G VT+ K Sbjct: 791 LSEELLAGNIETGATVTIGAKK 812 >UniRef50_A7I2C9 ATP-dependent CLP protease ATP-binding subunit n=3 Tax=Campylobacter RepID=A7I2C9_CAMHC Length = 729 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 285/745 (38%), Positives = 449/745 (60%), Gaps = 46/745 (6%) Query: 17 AREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEER 76 AR++R+ ++T H+L + +E ++ ++ I Q P S+ ++ Sbjct: 17 ARKYRNNYLTTYHILFSFFRYDVFKEFFY-----YYGMQNDVGETIRQIIENFPKSKNKK 71 Query: 77 DTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVN 136 L L+ + + G N+ ++ +F L RK + + ++ + Sbjct: 72 -----LKMTTELKYLINQINEIGTNKNEYEDIFRFMF---------LARKMDENYRELFD 117 Query: 137 FISHGTRKDEPT---------QSSDP-----GSQPNSEEQAGGEERMENFTTNLNQLARV 182 FI+ + + Q S P S N +E +E + NL + AR+ Sbjct: 118 FITPNDSYESLSLTFFEWLKRQKSIPMAEFLDSFENQDENEDQRSPLEIWGRNLCEEARL 177 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 G +D LIGREKE+E+ +Q LCRR+KNNPLLVGE+GVGKTA+ EG+A +I D PE + + Sbjct: 178 GKLDKLIGREKEVEKTLQTLCRRKKNNPLLVGEAGVGKTAVVEGIAQKIAFNDGPEKLKN 237 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 IY +++ S+LAGT YRGDFE+R L+ +L+ N I+F DEIHTI+GAG+ G D Sbjct: 238 KEIYEINLTSMLAGTTYRGDFEQRVNDLIDELKNKKNVIIFFDEIHTILGAGSTGGSDAD 297 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 A+ +KP L++G+I IG+TTY EF + F KD+AL RRF KIDI EP++E++ +I+ G Sbjct: 298 LADALKPALANGEISCIGATTYAEFRD-FGKDKALLRRFNKIDICEPTLEDSFKILKGGA 356 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 P+YE H V+++ + + V L+ KY++D+ LPD A D+IDE GA L R V+ Sbjct: 357 PRYENFHGVKFSDEILNECVRLSKKYLSDKFLPDSAFDLIDEIGASFSL---KGRHGEVS 413 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 D+ +++ +A ++++ + + LKNL LK +FGQD A++ L +A+ + AG+ Sbjct: 414 QDDVRKILSVMAN--AENINSDNSEILKNLKTNLKSEIFGQDSAVDTLYKALLRSYAGIK 471 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVG 542 E++P+G FLF G +GVGKTE+ L+ +L + LRFDMSEYME ++VS+ IG+ PGYVG Sbjct: 472 DENRPIGVFLFTGNSGVGKTELAKVLANSLNVSFLRFDMSEYMEENSVSKFIGSAPGYVG 531 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 F+QGG+LT+AV KHP++VLL DEIEKA+P + NI L + DN +L+DN G KADF+N +++ Sbjct: 532 FEQGGILTNAVKKHPYSVLLFDEIEKANPTIINIFLGIFDNASLSDNLGEKADFKNTIII 591 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 662 M++N G +E ++G +D + + F+PE R R+D II F+ L+ +++ Q+V Sbjct: 592 MSSNLGTKEA--ATLGF-KRDTAEKINTAVHDFFSPELRARIDKIINFNPLNNEILKQIV 648 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 DK+I L+ +L K V ++ + A+ +L +KG + GAR + R+I + ++ E+LF Sbjct: 649 DKYIKNLENKL--KNVKFDLDENAKEFLIKKGANTESGARNLKRIIDGEISDIISGEILF 706 Query: 723 GSLVDGGQVTVALDKEKNELTYGFQ 747 G L +GG V ++ + EK LT+ F Sbjct: 707 GKLKNGGTVKISTENEK--LTFEFN 729 >UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n=21 Tax=Bacteria RepID=C8NK17_COREF Length = 927 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 322/823 (39%), Positives = 473/823 (57%), Gaps = 109/823 (13%) Query: 12 MAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFI----EQT 65 +A AR H ++ EH+LL L+ A +ALE+ + L A+RQE+E I + T Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVRQEVEEIIGHGSKPT 74 Query: 66 TPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLR 125 T +P T ++VL+ ++ G + +L+ + E E AA +L Sbjct: 75 TGHIPF---------TPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLV 125 Query: 126 KHEVS----RLDVVNFIS-----HGTRKDEPT--QSSDP---GSQPNSEEQ-AGGEER-- 168 K R V+ +S G D P Q D GS P +G ER Sbjct: 126 KLGADLPRVRQQVIQLLSGYEGGQGGSPDSPQGGQGGDAVGAGSAPGGRATGSGAGERSN 185 Query: 169 ---MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 ++ F NL Q A+ G +DP++GR+KE+ER +QVL RR KNNP+L+GE GVGKTA+ E Sbjct: 186 SLVLDQFGRNLTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVE 245 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFID 285 GLA IV G VPE + D +YSLD+GSL+AG++YRGDFE+R K +LK++ Q + ILFID Sbjct: 246 GLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFID 305 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 EIHT++GAGAA G +DAA+L+KP L+ G+++ IG+TT E+ EKD AL RRFQ + Sbjct: 306 EIHTLVGAGAAEGA-IDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQ 364 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 + EPS+E +++I+ GL+ +YEAHH V T A+ AA +L+ +YINDR LPDKA+D+IDEA Sbjct: 365 VPEPSVELSIEILKGLRDRYEAHHRVSITDGALVAAAQLSDRYINDRFLPDKAVDLIDEA 424 Query: 406 GARARL----MPVSKRKKTVNVAD------------------------------------ 425 GAR R+ P S R+ +AD Sbjct: 425 GARMRIKRMTAPESLREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKLGEERAEKEK 484 Query: 426 -----------------IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIE 468 I V+A IP +++++ L N+ + L + GQD+A++ Sbjct: 485 QWRSGDLEEIAEVGEEQIAEVLATWTGIPVFKLTEAESSRLLNMEEELHKRIIGQDEAVK 544 Query: 469 ALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYM 525 A++ AI+ RAGL +P GSF+FAGP+GVGKTE++ L++ L L++ DM E+ Sbjct: 545 AVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLIQIDMGEFH 604 Query: 526 ERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGT 585 +R T SRL GAPPGYVG+++GG LT+ V + P +V+L DEIEKAH +++N LLQV+++G Sbjct: 605 DRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVLEDGR 664 Query: 586 LTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL-IHQDNSTDA-----------MEEIK 633 LTD GR DF+N VL+ T+N G ++ K++GL N TD+ +E+K Sbjct: 665 LTDGQGRIVDFKNTVLIFTSNLGTQDIS-KAVGLGFSGSNETDSDAQYDRMKNKVHDELK 723 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEK 693 K F PEF NR+D I+ F L+ + I Q+V+ I + L K + +E++ +A+ LA + Sbjct: 724 KHFRPEFLNRIDEIVVFHQLTREQIIQMVELLIGRVSRALADKDMGIELTDKAKALLASR 783 Query: 694 GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 G+D +GARP+ R IQ ++ ++ ++LFG + G VTV +D Sbjct: 784 GFDPVLGARPLRRTIQREIEDAMSEKILFGEIGAGEIVTVDVD 826 >UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=59 Tax=Firmicutes RepID=Q046D3_LACGA Length = 838 Score = 531 bits (1368), Expect = e-149, Method: Compositional matrix adjust. Identities = 313/806 (38%), Positives = 475/806 (58%), Gaps = 79/806 (9%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEAFIEQ-TT 66 L +A +A+ H + EH+LLAL+ +N A + L +V +R+E+E + ++ Sbjct: 29 LEIAKEQAQNFHHRIIGTEHVLLALVIEANGDAGKLLRERNVTPTLVREEIERYTGYGSS 88 Query: 67 PVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRK 126 P E P LS VL A G ++ ++L+ + + + A+ +L+ Sbjct: 89 PKATYME----MSPRLSL--VLNFAKQKSDELGTPQIETKHILLGLLASDQILASLILKN 142 Query: 127 HEVSRLDVVNFISHGTRKD--EPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGG 184 V D+ I+ D E D S +++ ++ + NLN+ AR G Sbjct: 143 IGVEPRDLSQDINDSFMDDSGEANNIFDVSSATRTKKGKSLTPNLDKVSVNLNKRAREGA 202 Query: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCT 244 IDP+IGR+KE++R IQ+L RR KNNP+LVGE GVGKTA+A+G+A IV +VP+ +A Sbjct: 203 IDPVIGRDKEIKRVIQILSRRTKNNPVLVGEPGVGKTAVAQGIASAIVNREVPDNLAKKR 262 Query: 245 IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA 304 + +LD+GSL+AGTKYRG+FE R K +LK++++D + ILF+DE+HT+IGAG A G +DA+ Sbjct: 263 VMALDMGSLIAGTKYRGEFEDRMKKILKEIQRDGSVILFVDEMHTLIGAGGAEGA-IDAS 321 Query: 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPK 364 N++KP L+ G I++IG+TT+ E+ EKD+ALARRFQ++ I EPS EETV I+ GL+PK Sbjct: 322 NILKPSLARGDIQMIGATTFDEYQKYIEKDQALARRFQQVKIGEPSKEETVDILKGLRPK 381 Query: 365 YEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA 424 YE H+V+ +A++ AVE + +YI +R LPDKAID+IDEA A ++ V K + Sbjct: 382 YEKFHNVKIEDEAIKDAVEFSTRYIANRFLPDKAIDLIDEASAAVKIQAVGKADPRLTKL 441 Query: 425 D--IESVVAR------------------------------IARIPEKSVSQSDRDT---- 448 D I V+ + IAR+ K+ +S D+ Sbjct: 442 DTQINDVIHQKEEAAENQNFVQAAKLRDEENKLTQDRDKLIARVENKNSKKSIVDSNKIA 501 Query: 449 ---------------------LKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 L +L L V GQDKAI A++ AI+ +R+G+ E++P Sbjct: 502 QIVSEWTGVPVTRMKKSETKRLAHLESILHERVIGQDKAISAVSRAIRRSRSGIKDENRP 561 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 +GSFLF GPTGVGKTE+ L+ A+ G E ++R DMSEYM++ S+LIG+ PGYVG++ Sbjct: 562 IGSFLFLGPTGVGKTELAKALAAAVFGSERNIIRVDMSEYMDQVATSKLIGSAPGYVGYE 621 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 +GG L++ V ++P++V+LLDE+EKAHPDVFN+LLQV+D G LTD+ GRK DFRN +++MT Sbjct: 622 EGGQLSERVRRNPYSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMT 681 Query: 605 TNAGVRE-TERKSIGLIHQDNSTDAMEE------IKKIFTPEFRNRLDNIIWFDHLSTDV 657 +N G R E K++G + + +++ +K+ F PEF NR+D + FD L+ Sbjct: 682 SNLGSRSLQEDKTVGFAADNEDKNKLQQEKVTAAVKQFFRPEFLNRIDETVVFDSLTKKQ 741 Query: 658 IHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 + ++V L +L +K V+L++S A + LA+ G+D MGARP+ R IQ L+ +A Sbjct: 742 LREIVSLMTSHLISRLARKEVTLKISPAALDVLAKDGFDPEMGARPLRRAIQHELEDVIA 801 Query: 718 NELLFGSLVDGGQVTVALDKEKNELT 743 +L+ + G V V + K + T Sbjct: 802 EDLISEKIKAGQTVKVGAHQGKLKFT 827 >UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=45 Tax=root RepID=CLPC_GUITH Length = 819 Score = 531 bits (1367), Expect = e-149, Method: Compositional matrix adjust. Identities = 308/789 (39%), Positives = 462/789 (58%), Gaps = 96/789 (12%) Query: 12 MAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVL 69 +A AR H F+ E +LL L+ + A + L++ V+L R E+E I + + + Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74 Query: 70 PASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV 129 + T +RVL+ ++ + G N + ++L+ + E E AA +L + Sbjct: 75 AV-----EIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLAL 129 Query: 130 S----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGI 185 R V+ + T + T G P EE F +NL Q A G + Sbjct: 130 DLTKVRTQVIRLLGD-TAEVSATNGQTKGKTPTLEE----------FGSNLTQKAAEGKL 178 Query: 186 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTI 245 DP+IGR+KE+ER IQ+L RR KNNP+L+GE GVGKTAIAEGLA RI DVP+++ D + Sbjct: 179 DPVIGRQKEIERVIQILGRRTKNNPILIGEPGVGKTAIAEGLAQRINNRDVPDILEDKRV 238 Query: 246 YSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAAN 305 +LDIG L+AGTKYRG+FE+R K ++ ++ N IL IDE+HT+IGAGAA G +DAAN Sbjct: 239 VTLDIGLLVAGTKYRGEFEERLKKIIDEIRVANNVILVIDEVHTLIGAGAAEGA-IDAAN 297 Query: 306 LIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKY 365 ++KP L+ G+++ IG+TT +E+ EKD AL RRFQ + + EPS+EET++I+ GL+ +Y Sbjct: 298 ILKPALARGEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETIEILYGLRDRY 357 Query: 366 EAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM-----PVSK---- 416 E HH + + +A+ AA + A +YI DR LPDKAID+IDEAG+R RLM P ++ Sbjct: 358 EKHHKLVISDEALSAAAKFADQYIADRFLPDKAIDLIDEAGSRVRLMNSQLPPAARELDK 417 Query: 417 --------RKKTVNVADIES----------VVARIARI---------------------- 436 + + V D E+ + A+IA I Sbjct: 418 ELREILKQKDEAVRSQDFETAGQLRDREMEIKAQIAAIAHSKKGDEENTKEVSVVTEEDI 477 Query: 437 ----------PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 P +++S+ + L + + L + GQD+A+ A+++AI+ AR GL + ++ Sbjct: 478 AQIVAAWTGIPVNKMTRSESEKLLQMEETLHGRIIGQDEAVVAVSKAIRRARVGLKNPNR 537 Query: 487 PVGSFLFAGPTGVGKTEVTVQL-SKALGIE--LLRFDMSEYMERHTVSRLIGAPPGYVGF 543 P+ SF+F+GPTGVGKTE+T L S G E ++R DMSEYMERHTVS+LIG+PPGYVG+ Sbjct: 538 PIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGY 597 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 ++GG LT++V + P+ V+L DEIEK HPDVFN+LLQ++++G LTD+ GR DF+N +L++ Sbjct: 598 NEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLIL 657 Query: 604 TTNAGVRETERKSIGL---IHQDNSTDAM--------EEIKKIFTPEFRNRLDNIIWFDH 652 T+N G + E+ GL + +D + EE+K+ F PEF NRLD II F Sbjct: 658 TSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIVFRQ 717 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 L+ D + ++ + + E+ ++ +KG+ LEV+ + L +GY+ GARP+ R + L Sbjct: 718 LTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRRAVMRLL 777 Query: 713 KKPLANELL 721 + L+ E L Sbjct: 778 EDTLSEEFL 786 >UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bacteroidales RepID=B0MVC3_9BACT Length = 819 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 274/633 (43%), Positives = 394/633 (62%), Gaps = 63/633 (9%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ F T+L AR G IDP++GRE+E+ER +Q+L RR+KNNP+L+GE+GVGK+AI EGLA Sbjct: 181 LDKFGTDLTYEARRGRIDPVVGREREMERIVQILSRRKKNNPILIGEAGVGKSAIVEGLA 240 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 R+ +VP + +YSLD+ SLLAGTKYRG+FE+R + LL++L + +SILFIDEIH Sbjct: 241 LRMAADEVPATIRGKRLYSLDVSSLLAGTKYRGEFEERMQRLLEELRRKQDSILFIDEIH 300 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 TI GAG+ G +D AN++KP L+ G+++VIG+TT E+ E D AL RRFQKI + Sbjct: 301 TIAGAGSTQ-GSLDTANILKPALARGELQVIGATTLDEYREDIESDPALERRFQKILVEP 359 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 S EET+QI++ + P YE HH VRY+ +A+RA V L +YI DR+ PDKAIDV+DEAGAR Sbjct: 360 ASEEETLQILHNIAPHYERHHGVRYSDEALRACVALTGRYITDRNFPDKAIDVLDEAGAR 419 Query: 409 ARL--------------------------MPVSKRKKT---------------------- 420 L P ++ +KT Sbjct: 420 IHLQDKGKTEKPSRKTASREPVGAAAGAKTPKNRSRKTAAADTTTVGGAVWTLPSDPGPP 479 Query: 421 -VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 + IE V+ + IP + +S S+ + L+ L D L V GQ +A+E ++ +I+ +RA Sbjct: 480 EIRAEHIEQVITSMTGIPAERLSGSESERLRGLADYLSARVIGQCEAVEKISRSIQRSRA 539 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGA 536 GL E +P+G F+F GPTGVGKT + +LSK L E L+R DMSEY E+H V+RLIG+ Sbjct: 540 GLKDEGRPIGVFMFVGPTGVGKTLLAKELSKWLFDENKGLIRIDMSEYSEKHNVARLIGS 599 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG+ +GG LT+AV +HP++V+L DEIEKAHP+VFN LLQ+ D G LTD +GRK DF Sbjct: 600 PPGYVGYGEGGQLTEAVRRHPYSVVLFDEIEKAHPEVFNTLLQIFDEGHLTDGSGRKVDF 659 Query: 597 RNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE----------IKKIFTPEFRNRLDN 646 RN V+++T+N G R +S + + S ++ +++ F PEF NR+D+ Sbjct: 660 RNTVIILTSNVGSRAAAIRSTQVGYSTCSKSDTQQKAPQSEYRRALEETFAPEFLNRIDD 719 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 I+ F L + +++D + L + D+ G +E++ EA+ LA GY R G R + R Sbjct: 720 IVIFRTLDLSDVERIIDLELKGLLSRTDRLGYKVEITDEAKRTLAAIGYQRKYGVRALRR 779 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 + + +++PL+ ++ G L G +V V D EK Sbjct: 780 TLLERIEEPLSGLIIDGKLHSGERVIVEPDGEK 812 >UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic n=354 Tax=cellular organisms RepID=CLPC_PEA Length = 922 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 309/817 (37%), Positives = 473/817 (57%), Gaps = 111/817 (13%) Query: 12 MAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE-------AFI 62 +A AR H F+ E +LL L+ + A + L++ ++L R E+E F+ Sbjct: 105 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 164 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 P P + +RVL+ + + G N + ++L+ + E E AA Sbjct: 165 AVEIPFTPRA------------KRVLELSQEEARQLGHNYIGSEHLLLGLLREGEGVAAR 212 Query: 123 LLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 +L R V+ + G D T + GS N +E + TNL + Sbjct: 213 VLENLGADPTNIRTQVIRMV--GESADSVTATVGSGSSNNKTPT------LEEYGTNLTK 264 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 LA G +DP++GR+ ++ER Q+L RR KNNP L+GE GVGKTAIAEGLA RI GDVPE Sbjct: 265 LAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPE 324 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + +LD+G L+AGTKYRG+FE+R K L+++++Q + ILFIDE+HT+IGAGAA G Sbjct: 325 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEG 384 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DAAN++KP L+ G+++ IG+TT E+ EKD L RRFQ + + EP+++ET+QI+ Sbjct: 385 A-IDAANILKPALARGELQCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETIQIL 443 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL----MP- 413 GL+ +YE HH +RYT +A+ AA +L+ +YI+DR LPDKAID++DEAG+R RL +P Sbjct: 444 KGLRERYEIHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLQHAQLPE 503 Query: 414 ------------VSKRKKTVNVADIES----------VVARIARIPEKSVSQSDRDT--- 448 V ++++ V D E + A+I+ + EK S +T Sbjct: 504 EAKELDKEVRKIVKEKEEYVRNQDFEKAGELRDKEMDLKAQISALIEKGKEMSKAETETA 563 Query: 449 ---------------------------------LKNLGDRLKMLVFGQDKAIEALTEAIK 475 L + D L + GQD+A++A++ AI+ Sbjct: 564 DEGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRIIGQDEAVQAISRAIR 623 Query: 476 MARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK-ALGIE--LLRFDMSEYMERHTVSR 532 AR GL + ++P+ SF+F+GPTGVGK+E+ L+ G E ++R DMSE+MERHTVS+ Sbjct: 624 RARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSK 683 Query: 533 LIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGR 592 LIG+PPGYVG+ +GG LT+AV + P+ V+L DEIEKAHPDVFN++LQ++++G LTD+ GR Sbjct: 684 LIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 743 Query: 593 KADFRNVVLVMTTNAGVRETER--KSIGL----IHQDNSTDAM-----EEIKKIFTPEFR 641 DF+N +L+MT+N G E+ + IG +D+S + + EE+K+ F PEF Sbjct: 744 TVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFL 803 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 NRLD +I F L+ + ++ D + E+ +L K + L+V++ R+ + ++GY+ + GA Sbjct: 804 NRLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGA 863 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 RP+ R I L+ +A ++L + +G V V +D + Sbjct: 864 RPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD 900 >UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RFB8_ANAPD Length = 814 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 310/804 (38%), Positives = 467/804 (58%), Gaps = 95/804 (11%) Query: 10 LNMAFARAREH----RHEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELEAFIEQ 64 LN ++AR H+++ EHLLLAL+ S A +ALE + R + I + Sbjct: 6 LNRLTSQARRESYSLNHDYIGSEHLLLALMKTGSLANKALEKSGANYDLFRSIVINNIGR 65 Query: 65 TTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLL 124 PA+E + + R + A +SS NE ++L A+ ++ +S + Sbjct: 66 GNSQRPATEFSKKVRMIFEKSREIAMAR---KSSVVNE---EDILQALINDDDSFTNLM- 118 Query: 125 RKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN---FTTNLNQLAR 181 F+ G K ++ D + + + + EN +T +LN+LA Sbjct: 119 ------------FLLSGLDKKVIGKNLDDMLKEVYKTKGSSSKFSENVTKYTNDLNELAE 166 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G IDP+IGR+ E+ER +Q+L RRRKNNP+L+G GVGKTAIAEGLA RIV DVP+++ Sbjct: 167 SGKIDPVIGRDTEIERLVQILMRRRKNNPILIGAPGVGKTAIAEGLAQRIVAKDVPKIIK 226 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 D I SLD+ S++AG+KYRGDFE R K L +++ + + ILFIDE H ++GAG AS G + Sbjct: 227 DKRILSLDLASMIAGSKYRGDFEDRLKKLFEEIGKRDDVILFIDEFHMVLGAG-ASEGSM 285 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DAAN++KP+L+ G+I+++G+TT +E+ EKD AL+RR Q I + EPS+E+ +II GL Sbjct: 286 DAANILKPILAKGEIQIMGATTIEEYRKHVEKDSALSRRMQPIQVDEPSLEDARKIIQGL 345 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK----- 416 K KYE HH V T +A+ AAV+L+ +YI+DR+LPDKAID+IDEA ++ R+ K Sbjct: 346 KDKYEDHHGVEITDEAIEAAVDLSDRYISDRYLPDKAIDLIDEASSKIRIAAFQKEDDSA 405 Query: 417 ------------RKKTVNVADIE------------------------------------- 427 +++ V D E Sbjct: 406 PSEDKLEKLNKEKEQAVRDQDFERAAELRDKINQAKFDLEIEKEKEKENKDRLFISYDDI 465 Query: 428 -SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 SVVA +++P + +++ + + NL + LK+ V GQ AI+++ +IK AR GL K Sbjct: 466 ASVVANWSKVPVEKLTEDEMEKYANLDEDLKLSVIGQKDAIDSVARSIKRARVGLKDPKK 525 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGF 543 P+GSF+F GPTGVGKT + L++ L G E L+R DMSEYME+ VSRL+G+PPGYVG+ Sbjct: 526 PIGSFIFVGPTGVGKTYLAKTLAQNLFGSEDKLIRMDMSEYMEKFAVSRLVGSPPGYVGY 585 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 ++GG LT+AV +P++V+L DEIEKAHPDVFN+LLQ++D+G LTD GR DF+N +++M Sbjct: 586 EEGGQLTEAVRTNPYSVILFDEIEKAHPDVFNLLLQILDDGRLTDGQGRTVDFKNTIIIM 645 Query: 604 TTNAGVRE-TERKSIGL-------IHQDNSTDAMEE-IKKIFTPEFRNRLDNIIWFDHLS 654 T+N GVR + KSIG ++ +++ +E+ IK F PEF NRLD +I F L Sbjct: 646 TSNIGVRSLSTSKSIGFELGDQKEAEEERTSEIIEKAIKDSFAPEFLNRLDQVIMFKPLG 705 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 I ++ + + + +L++ + + Q+ LA++G+D GARP+ R I + Sbjct: 706 EAEIGEISGLMLEKTRQRLNEIDLDIVYDQKVVKLLAKEGFDPEYGARPLERHITKMIDD 765 Query: 715 PLANELLFGSLVDGGQVTVALDKE 738 LA ++L G L + +++ K+ Sbjct: 766 RLAEDILDGKLKRDETIRISVRKD 789 >UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogaceae RepID=A7HJU2_FERNB Length = 741 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 301/739 (40%), Positives = 460/739 (62%), Gaps = 38/739 (5%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELEAF 61 QE+ S+N R R+++ + EH+LL +L N +A + L +VD ALR+++E Sbjct: 13 QEILQSVNDVLNRYRQNQ---LAPEHILLTMLENTKTAAVDILTFLNVDTDALRRDVERI 69 Query: 62 IEQTTPVLPASEEERD-TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 I + + T +V+ A + G +V ++L+A+ E+ Sbjct: 70 ISSKGGYYYSGSGGTNQIYITPDTTKVINEAKREAKRMGDEKVGTDHLLLAMAIVPETTT 129 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 LL K+ V++ + + I + + SEE+ + + FT NL ++A Sbjct: 130 YRLLSKYGVTQDALYSAIKQLRMQ-----------RTYSEEE--NIDILAKFTENLTEMA 176 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G + P++GRE E+ R I++L R+ KNNP+L+G+ GVGKTAI EGLA RIV DVPE + Sbjct: 177 KNGQLMPVVGRENEINRMIEILGRKIKNNPVLIGDPGVGKTAIVEGLAQRIVNKDVPEFL 236 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + TI LD+ L+AGTK+RG+FE+R K L+ L++ T+ ILFIDE+HT++GAGAA G Sbjct: 237 KNKTILKLDLARLVAGTKFRGEFEERLKKLIDVLKKRTDVILFIDELHTVVGAGAAEGA- 295 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA N++KP L+ G +RVIG+TT +E+ EKD+ALARRFQ I + EPSIEET++I+ G Sbjct: 296 LDAGNILKPELARGTLRVIGATTVEEYRKHIEKDKALARRFQVIFVPEPSIEETIEILKG 355 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 LK K+E H+V + KA+ A +++ +YI DR LPDKA+D++DEA ARA++ KK Sbjct: 356 LKAKFEEFHNVSISDKAIEFAAKMSARYITDRFLPDKAVDLVDEAAARAKI----DGKKE 411 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 + DI SV+ R IP + +++ +KNL + Q++A++ ++ AIKM+RAG Sbjct: 412 IVEEDIASVIERWTGIPVGKIMGDEKEKIKNLEKIIHEKFVDQEEAVKIVSNAIKMSRAG 471 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAP 537 + + +P+G FLF GPTGVGKTE+ +L+ L G E L+R DMSEYME+H+V+RLIGAP Sbjct: 472 IRNPKRPLGVFLFLGPTGVGKTELAKRLADVLFGSEKALIRIDMSEYMEKHSVARLIGAP 531 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GG LT+ V + P++V+L DEIEKAHP+VFN+LLQ+ D+G LTD G DFR Sbjct: 532 PGYVGYEEGGQLTEQVRRRPYSVVLFDEIEKAHPEVFNVLLQLFDDGRLTDGKGTTVDFR 591 Query: 598 NVVLVMTTNAG----VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHL 653 N +++MT+N G +++ E LI + EE++K F PE NR+D + F L Sbjct: 592 NTIIIMTSNIGSDVIMQDIEEGFEDLIPRHIE----EEMRKYFRPELINRIDAAVVFKPL 647 Query: 654 STDVIHQVVDKFIVELQVQL--DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 + I ++++ + EL +L K + + + + R +LA +GY +MGARP+ R+ ++ Sbjct: 648 KKEHIKEIIEIYTKELNERLIDSDKDIKVVLDESMREYLATEGYVPSMGARPLRRLFENT 707 Query: 712 LKKPLANELLFGSLVDGGQ 730 ++ LA EL+ V GQ Sbjct: 708 VEFKLA-ELIIDEKVKEGQ 725 >UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=Q025Q2_SOLUE Length = 823 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 314/800 (39%), Positives = 463/800 (57%), Gaps = 102/800 (12%) Query: 14 FAR--AREHRHEFMTVEHLLLALLSNPSA---REALEACSVDLVALRQELEAFIE----- 63 FAR A + ++ EHLLL LL A R +V+ ++R+++E Sbjct: 15 FARYEASQFGSPYIETEHLLLGLLREDKALANRFLRSHAAVE--SIRKQIEGHTTIREKV 72 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 T+ LP S E +RVL + + ++L+ + E++ AA + Sbjct: 73 STSVDLPLSHE---------CKRVLAYGAEEAERLSHKHIGTEHLLLGLLREEKCFAAEI 123 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 L + + RL + R++ S+ + +E + + F+ +L Q A Sbjct: 124 LHERGL-RLSTI-------REELARSQSEKVASARPKESS----LLAEFSRDLTQAAMDN 171 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 +DPLIGR+ ELER +Q+LCRR KNNP+L+GE GVGKTAI EGLA RI +GDVP +AD Sbjct: 172 TLDPLIGRDYELERVVQILCRRTKNNPVLIGEPGVGKTAIVEGLAQRIAEGDVPSFLADK 231 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 I +LD+ ++AGTKYRG FE+R K ++K+L ++ N+I+FIDE+HT++GAG+A G +DA Sbjct: 232 RILALDLSLIVAGTKYRGQFEERLKTIMKELMENQNAIIFIDELHTLVGAGSAEGS-LDA 290 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP 363 AN++KP LS G+I+ IG+TT EF EKDR+L RRFQ + + P+ + ++I+ G+K Sbjct: 291 ANILKPALSRGEIQCIGATTPAEFRKSIEKDRSLERRFQAVKVPPPNESDAIKILFGIKD 350 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL----MP-----V 414 +YE H V YT A+ AAV + +YI DR+LPDKAID+IDEAGAR +L +P + Sbjct: 351 RYEKFHAVAYTDDAIEAAVYTSSRYIPDRYLPDKAIDLIDEAGARVKLRQTTLPADLADI 410 Query: 415 SKRKK-----------------------------------------------TVNVADIE 427 KR K V DIE Sbjct: 411 QKRIKFIVHRMENAIANHEFEKARFYSDEERKERENMRLLREKYNLDDSSTGCVTKDDIE 470 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 VVAR +P S+ + + L + + L V Q+KAI AL AI+ +RAGL ++P Sbjct: 471 DVVARWTGVPMTSIKEEEIAKLLRIEEELHKRVISQEKAISALARAIRRSRAGLKASNRP 530 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 GSFLF GPTGVGKTEV L+ L G E L+RFDMSEYME+H+VS+LIG+PPGYVG++ Sbjct: 531 AGSFLFLGPTGVGKTEVARALAGFLFGSEKSLVRFDMSEYMEKHSVSKLIGSPPGYVGYE 590 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 +GG LT+ V ++P++++LLDEIEKAHPD++NILLQV ++G LTD G + DF+N +++MT Sbjct: 591 EGGQLTERVKRNPYSIILLDEIEKAHPDIYNILLQVFEDGQLTDGLGNQVDFKNTIIIMT 650 Query: 605 TNAGVRETERK-SIGL---IHQDNSTDAME----EIKKIFTPEFRNRLDNIIWFDHLSTD 656 +N G R E++ ++G + ST + E+KK F PEF NRLD +I F L+ Sbjct: 651 SNLGARFLEKRGNLGFSIPAGEAGSTKVEDMVRSEVKKAFNPEFLNRLDEVILFMSLTDP 710 Query: 657 VIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGY-DRAMGARPMARVIQDNLKKP 715 + Q+++ + ++ V L K V + ++ +A ++ EK DR+ GARP+ R +Q ++ P Sbjct: 711 DLIQIMELLVQQVNVNLVAKQVKIHLAPDAAKYILEKTCADRSYGARPLRRALQKYIEDP 770 Query: 716 LANELLFGSLVDGGQVTVAL 735 L+ L+ G+L + V L Sbjct: 771 LSEALIQGTLPRPADLEVYL 790 >UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FG52_SACEN Length = 768 Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust. Identities = 293/721 (40%), Positives = 433/721 (60%), Gaps = 44/721 (6%) Query: 29 HLLLALLS-NPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLS--FQ 85 HLL A+ P+AR L V + +EL + + A + +P LS + Sbjct: 44 HLLWAVTQVGPTAR-MLGDSGVRV----EELASAVRTVAGTYDALGGQAQGKPVLSSSAR 98 Query: 86 RVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKD 145 R L A S G + V +VL+ + ++ +S A L R Sbjct: 99 RALLGAHQQALSEGADAVGARHVLLGLATDADSVAGRAL-----------------ARAM 141 Query: 146 EPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRR 205 E ++ + P ++P+ +++ F ++ +LAR G +DP++GR +E+E+A++VL RR Sbjct: 142 ERSERTRPNARPSVLSTT---PKLDEFGMDMTELARAGRLDPVVGRSQEVEQAVEVLGRR 198 Query: 206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK 265 KNNP+ +G+ GVGKTAI EGLA RIV G VP +A + SLD+ ++AG KYRG+FE+ Sbjct: 199 TKNNPVFIGDPGVGKTAIVEGLAQRIVDGAVPWSLAGRRVVSLDLAGMVAGAKYRGEFEQ 258 Query: 266 RFKALLKQLEQDTNSIL-FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTY 324 RF+ L+ ++ Q + +L FIDEIH I+GAGA G +DA ++KP L+ G+++V+G+TT Sbjct: 259 RFRDLMNEIRQHRDEVLVFIDEIHGIVGAGAGE-GTMDAGTMLKPALARGEVQVVGATTV 317 Query: 325 QEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVEL 384 +E+ EKD AL RRFQ I + EPS+ +TV ++ GL+ +Y+ HH V A+ AA L Sbjct: 318 EEYRKHIEKDPALERRFQPILVAEPSVGDTVAVLRGLRDRYQLHHRVVIADDALVAAARL 377 Query: 385 AVKYINDRHLPDKAIDVIDEAGARARLM-------PVS--KRKKTVNVADIESVVARIAR 435 + +YI DR LPDKA+D++D+A +R RL+ P S + + +V D+ VV+R Sbjct: 378 SQRYIADRFLPDKAVDLLDQACSRVRLLRGGSPNDPGSSAEHQPSVGRDDVADVVSRRTG 437 Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 IP ++ +D+ L L L+ V GQD A+ ++ EA++ ARAGL +P+GSFLF G Sbjct: 438 IPVSDLTAADKQRLLGLEKVLRSKVIGQDAAVRSVAEAVRRARAGLADPERPIGSFLFLG 497 Query: 496 PTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 PTGVGKTE+ L++AL L+RFDM E+ E+HTVSRLIGAPPGYVG+ + G LTD Sbjct: 498 PTGVGKTELARALARALFGDAQRLIRFDMGEFQEKHTVSRLIGAPPGYVGYGESGQLTDR 557 Query: 553 VIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET 612 V + P++VLLLDE+EKAHPDVFN LLQ++D G L+D GR DFRNVV++MT+N G Sbjct: 558 VRRQPYSVLLLDEVEKAHPDVFNTLLQLLDEGRLSDAQGRSVDFRNVVVIMTSNIGADRI 617 Query: 613 ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ 672 G D++ + +EE++ F PEF NR+D++ F L + ++ + Q Sbjct: 618 --LDAGGSAGDSALELLEELRSFFRPEFINRIDDVTVFQPLGPAALREITGLLLERTYQQ 675 Query: 673 LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVT 732 L +G+ +EV++ A WLAE+G+ GARP+ RVIQ L LA ++ G L G +V Sbjct: 676 LLARGIGMEVTEAAVAWLAERGHQPEFGARPLRRVIQRELDNRLAAMVIDGELSSGHRVL 735 Query: 733 V 733 V Sbjct: 736 V 736 >UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteria RepID=A4FF35_SACEN Length = 838 Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust. Identities = 306/806 (37%), Positives = 460/806 (57%), Gaps = 79/806 (9%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 ++ Q+ + L A AR H+ + H+L A + RE LE VD + Sbjct: 40 LMTQKTQELLAGAADYARGLGHDDLDALHVLWAATKEATTREMLEGVQVDP-------DT 92 Query: 61 FIEQTTPVLPASEEERDTQPTLS--FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 F E LPA+ E P L+ ++VL A ++ G + +VL+A+ + +S Sbjct: 93 FAETVQRQLPAAREAASRAPALTPAGRKVLVDAYQVARALGSTYIGPEHVLLAMSASPDS 152 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 +A LL + + + G R+ S+ + + E+ G ++ + +L Sbjct: 153 EAGRLLASAGAT-PEEFRVSAGGARR------SEAATGQATAERDSGTPTLDKYGQDLTA 205 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR G +DP++GR E+E+ I+VL RR KNNP+LVGE+GVGKTAI EG+A RI G VP Sbjct: 206 RARDGELDPVVGRADEIEQTIEVLSRRTKNNPVLVGEAGVGKTAIVEGIAQRIADGQVPH 265 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAAS 297 V+ I LD+ S+LAGT+YRGDFE+R ++ ++ ++ I+FIDE+HT++GAG A Sbjct: 266 VLTGKRIVQLDLSSMLAGTRYRGDFEERMTKVIDEISANSGEVIVFIDELHTLVGAGGAE 325 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G VDA N++KP L+ G++ V+G+TT E+ EKD AL RRFQ + + EPS+E+T+++ Sbjct: 326 GA-VDAGNMLKPRLARGELHVVGATTLDEYRKNIEKDAALERRFQPVQVPEPSVEDTIEV 384 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS-- 415 ++ L+ +Y HH VRYT +AV AA L+ +YI DR LPDKAID++D+AGAR RL V Sbjct: 385 LDRLRDRYAEHHRVRYTDEAVAAAARLSDRYIADRFLPDKAIDLLDQAGARKRLSVVGPS 444 Query: 416 -----------KRKKTVNVA-----------------------------------DIESV 429 +R+K +VA DI V Sbjct: 445 ADELEQRIQRLEREKDRSVADEDYERASALRDEIGVAQAELEANRDAGVPEVTESDIAEV 504 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 V+R +P +++ +R L+NL L V GQD A+ AL A++ +R+G+G+ ++PVG Sbjct: 505 VSRATGVPVSRLTEQERTRLRNLEGELHRRVIGQDDAVRALARAVRRSRSGVGNANRPVG 564 Query: 490 SFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 SFLF GPTGVGKTE+ L++ L G E ++R DMSE+ ERH +RLIGAPPGYVG+ + Sbjct: 565 SFLFLGPTGVGKTELAKALAETLFGDEDRMIRLDMSEFQERHNAARLIGAPPGYVGYGEA 624 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G LT+AV + P++V+LLDE+EKAHPDVFN LLQV+++G LTD GR DF N V++MT+N Sbjct: 625 GELTEAVRRRPYSVVLLDEVEKAHPDVFNTLLQVLEDGRLTDGQGRTVDFTNTVVIMTSN 684 Query: 607 AGVRETERKSIGL---IHQDNSTDA-----MEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 G KS GL QD + ++ M +K+ F PEF NR+D ++ F L+ + + Sbjct: 685 LGSEVISSKSGGLGFSAAQDEADESLHDRLMPRLKEAFRPEFLNRIDEVVVFRKLTAEQL 744 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 H + D + + +L + + A + +AE+G+ GARP+ R I+ ++ +A+ Sbjct: 745 HDIADLLLDGTRKRLAAMEIGIGFDDAAVDLIAERGHQPEFGARPLRRTIERDVDDRIAD 804 Query: 719 ELLFGSLVDGGQVTVALDKEKNELTY 744 +L G L G V V + +LT+ Sbjct: 805 LVLDGELEAGSAVHVGV--RDGQLTF 828 >UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=Q9KAV7_BACHD Length = 711 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 268/630 (42%), Positives = 409/630 (64%), Gaps = 60/630 (9%) Query: 145 DEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCR 204 D+P S S+ N GG ++ N+ A+ G IDP+IGR++E+ER IQ+LCR Sbjct: 67 DQPVSSIAMKSKTN--HSGGG--FLDQHGRNVTAEAKAGQIDPVIGRDQEVERLIQILCR 122 Query: 205 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 R KNNP+L+GE+GVGKTAI EG A RI +G+VP M + +Y L++ SL+AGT YRG FE Sbjct: 123 RTKNNPVLIGEAGVGKTAIVEGFARRIAEGNVPAKMKNKEVYELELSSLVAGTSYRGQFE 182 Query: 265 KRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTY 324 ++ + L+++LE + ILFIDEIH ++GAGA S G +DA N++KP L+ G++++IG+TT Sbjct: 183 EKMEQLVRELEARDDVILFIDEIHMVVGAGATSEGSMDAGNILKPALARGQLQIIGATTL 242 Query: 325 QEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVEL 384 E+ I EKD AL RRFQ I + EP++E V+I+ G++P YEA+H V Y + A V L Sbjct: 243 NEYRKI-EKDPALERRFQPITVKEPTLEAAVEILKGVRPIYEAYHHVSYPDDVLEACVRL 301 Query: 385 AVKYINDRHLPDKAIDVIDEAGA--------------RARLMPVSKRKKT---------- 420 + +YI DR LPDKAID++DE G+ + RL ++K K+ Sbjct: 302 SDRYIQDRFLPDKAIDLMDEIGSALTLTSGPTTLDELKERLAEITKEKQQATAQEDYERA 361 Query: 421 -----------------------VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 V VADI+ ++ + IP + + ++++ +K+L +RL Sbjct: 362 AKLRDEENLLHKQMNENRAEKTEVTVADIQGLIEKRTGIPVRKLQKAEQTKMKDLHNRLA 421 Query: 458 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE- 515 V GQ +A+E + +AIK +RAGL +++P+ SF+F GPTGVGKTE+T L++ L G + Sbjct: 422 RQVIGQAEAVEKVAKAIKRSRAGLKPKNRPI-SFMFVGPTGVGKTELTKTLAQELFGSKE 480 Query: 516 -LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVF 574 ++R DMSE+ME+H+VS+LIG+PPGYVG D+GG LT+ V + P++++LLDEIEKAHPDV Sbjct: 481 AMIRLDMSEFMEKHSVSKLIGSPPGYVGHDEGGQLTEQVRRKPYSIILLDEIEKAHPDVQ 540 Query: 575 NILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL---IHQDNSTDAMEE 631 ++ LQ++++G LTD+ GR F++ V++MT+NAGV ++ ++G + N +E+ Sbjct: 541 HMFLQILEDGRLTDSQGRAVSFKDTVIIMTSNAGVG-VKKITVGFEKNVETQNKAGILEQ 599 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLA 691 I + F PEF NRLD II F+HL+ + ++VD + +L +L ++ +SL VS++A+ L Sbjct: 600 INQYFKPEFLNRLDAIIEFNHLTEQDLMRIVDLMLQDLGDRLAEQDISLTVSEKAKAQLV 659 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELL 721 + G DRA GARP+ R IQD+++ + +L+ Sbjct: 660 KIGSDRAFGARPLRRAIQDHVEDSITEKLI 689 >UniRef50_P37571 Negative regulator of genetic competence clpC/mecB n=137 Tax=Bacteria RepID=CLPC_BACSU Length = 810 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 309/795 (38%), Positives = 469/795 (58%), Gaps = 93/795 (11%) Query: 22 HEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 H + EH+LL L+ A +AL+A + +++E+E+ I + E + Sbjct: 26 HNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGR------GQEMSQTIH 79 Query: 80 PTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVS----RLDVV 135 T ++V++ ++ + G + V ++L+ + E E AA +L VS R V+ Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139 Query: 136 NFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKEL 195 + T SS G+ N+ +++ +L +A+ +DP+IGR KE+ Sbjct: 140 QLLGSN-----ETGSSAAGTNSNANTPT-----LDSLARDLTAIAKEDSLDPVIGRSKEI 189 Query: 196 ERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 255 +R I+VL RR KNNP+L+GE GVGKTAIAEGLA +I+ +VPE++ D + +LD+G+++A Sbjct: 190 QRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVA 249 Query: 256 GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGK 315 GTKYRG+FE R K ++ ++ Q N ILFIDE+HT+IGAG A G +DA+N++KP L+ G+ Sbjct: 250 GTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGA-IDASNILKPSLARGE 308 Query: 316 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTA 375 ++ IG+TT E+ EKD AL RRFQ I + +PS++E++QI+ GL+ +YEAHH V T Sbjct: 309 LQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITD 368 Query: 376 KAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS---------------KRKKT 420 A+ AAV+L+ +YI+DR LPDKAID+IDEAG++ RL + +++K Sbjct: 369 DAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKD 428 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLG------------DRLKMLV-------- 460 V E A R E+ + + DT K+ D + M+V Sbjct: 429 AAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWTGVPV 488 Query: 461 ----------------------FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTG 498 GQD+A+ A+ +A++ ARAGL +P+GSF+F GPTG Sbjct: 489 SKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTG 548 Query: 499 VGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIK 555 VGKTE+ L++++ G E ++R DMSEYME+H+ SRL+G+PPGYVG+D+GG LT+ V + Sbjct: 549 VGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRR 608 Query: 556 HPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER- 614 P++V+LLDEIEKAHPDVFNILLQV+++G LTD+ GR DFRN +L+MT+N G E +R Sbjct: 609 KPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKRN 668 Query: 615 KSIGL-------IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 K +G H+D M E+K+ F PEF NR+D II F L + ++V Sbjct: 669 KYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSD 728 Query: 668 ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVD 727 +L +L ++ +S+E++ A+ +AE+G D GARP+ R IQ +++ L+ ELL G++ Sbjct: 729 QLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHK 788 Query: 728 GGQVTVALDKEKNEL 742 G + LD E E Sbjct: 789 GQHIV--LDVEDGEF 801 >UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n=6 Tax=Bacteria RepID=C8NYT7_9CORY Length = 967 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 315/834 (37%), Positives = 465/834 (55%), Gaps = 127/834 (15%) Query: 12 MAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVL 69 +A AR+ H ++ EH+LL L+ A +ALE+ ++L +R+E+E I Sbjct: 15 LAQQEARDLNHNYIGTEHILLGLIQEGEGVAAKALESMGINLDDVRREVEEIIG------ 68 Query: 70 PASEEERDTQP-------TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 R +QP T ++VL+ ++ G + +L+ + E E AA Sbjct: 69 ------RGSQPHTGHVPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQ 122 Query: 123 LLRKHEVS----RLDVVNFIS--HGTRKDEPT----QSSDPG------------SQPNSE 160 +L K R V+ +S G P Q PG + Sbjct: 123 VLIKLGADLPRVRQQVIQLLSGYEGGEGQNPEIAEGQQGGPGLTGAGAGSGSMGGMGSGR 182 Query: 161 EQAGGEER----MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGES 216 GE ++ F NL A+ G +DP++GR+KE+ER +QVL RR KNNP+L+GE Sbjct: 183 GGNQGERSNSLVLDQFGRNLTAAAKEGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEP 242 Query: 217 GVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ 276 GVGKTA+ EGLA I G VPE + D +YSLD+GSL+AG++YRGDFE+R K +LK++ Q Sbjct: 243 GVGKTAVVEGLALDIANGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQ 302 Query: 277 DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 + ILFIDEIHT++GAGAA G +DAA+L+KP L+ G+++ IG+TT E+ EKD A Sbjct: 303 RGDIILFIDEIHTLVGAGAAEGA-IDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAA 361 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L RRFQ + + EPS+E T+QI+ GL+ +YEAHH V YT A+ AA L+ +YINDR LPD Sbjct: 362 LERRFQPVQVDEPSVENTIQILKGLRDRYEAHHRVSYTDDALAAAANLSDRYINDRFLPD 421 Query: 397 KAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSD-------RDTL 449 KA+D++DEAGAR R+ ++ K + D++ + + R E ++ D RDT Sbjct: 422 KAVDLLDEAGARMRIKRMTAPK---GLRDVDDRITEVRREKEAAIDAQDFEKAAGLRDTE 478 Query: 450 KNLG-----------------------------------------------------DRL 456 + LG D L Sbjct: 479 RKLGEERAEKEKQWRAGELEDIAEVGEEQIADVLANWTGIPVFKLTESESSRLLHMEDEL 538 Query: 457 KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE 515 + GQD A++A++ AI+ RAGL +P GSF+FAGP+GVGKTE++ L++ L G E Sbjct: 539 HQRIIGQDDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDE 598 Query: 516 --LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV 573 L++ DM E+ +R T SRL GAPPGYVG+++GG LT+ V + P +V+L DEIEKAH ++ Sbjct: 599 DSLIQVDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEI 658 Query: 574 FNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST---DAM- 629 +N LLQV++ G +TD GR DF+N VL+ T+N G + K++GL ST DA Sbjct: 659 YNTLLQVLEEGHVTDGQGRNVDFKNTVLIFTSNLGTSDIS-KAVGLGFSGASTTDSDAQY 717 Query: 630 --------EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLE 681 +E+KK F PEF NR+D I+ F L+ + I ++V+ L L+ + + +E Sbjct: 718 ERMKQKVHDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVELLAGRLAKNLETQDMGIE 777 Query: 682 VSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 +S++A+N LA +G+D +GARP+ R IQ ++ L+ ++LFG + G + V + Sbjct: 778 LSEDAKNLLAARGFDPVLGARPLRRTIQREIEDVLSEKILFGEIGAGEIIEVGV 831 >UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria RepID=A0K1M3_ARTS2 Length = 857 Score = 507 bits (1306), Expect = e-142, Method: Compositional matrix adjust. Identities = 276/638 (43%), Positives = 398/638 (62%), Gaps = 72/638 (11%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ + T+L LAR GG+DP+IGR E + I+VL RR KNNP+L+GE+GVGKTAI EGLA Sbjct: 205 LDTYGTDLTALARSGGLDPVIGRSDETAQTIEVLARRTKNNPVLIGEAGVGKTAIVEGLA 264 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEI 287 I G VPE + + + SLD+ ++LAGT+YRGDFE+R + ++ + ILFIDE+ Sbjct: 265 QAIAAGTVPEQLRNKRVISLDLPAMLAGTRYRGDFEERLTKAMDEVTANPGQFILFIDEL 324 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT+IGAG A G +DA N++KP L+ G++ V+G+TT+ E+ + EKD A RRFQ + + Sbjct: 325 HTVIGAGGAGEGGMDAGNILKPRLARGELHVVGATTFNEYRKV-EKDPAFERRFQPVQVG 383 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EP++E+ VQI++GL+ +YE HH VRYT +AVRAAVEL+ +Y+ DR LPDKAID++D+AGA Sbjct: 384 EPAVEDAVQILSGLRERYEEHHGVRYTDEAVRAAVELSARYVTDRFLPDKAIDLMDQAGA 443 Query: 408 RARLMPVSKR--------------KKTVNVA----------------------------- 424 R L S++ KT +A Sbjct: 444 RLSLKLGSRQDAAALRERLVALEESKTAAIAAEDFEAASRLRDEANALKEKLDGGAASQE 503 Query: 425 ------------DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTE 472 +I +++R IP +++ DR+ L L + L V GQ+ A+ + + Sbjct: 504 GPGSESAVVGEAEIAEIISRATGIPASRITEGDRERLARLEEDLHQRVVGQEDAVSLIAK 563 Query: 473 AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHT 529 +++ R G+G +P+GSFLF GPTGVGKTE+ L+ +L G E ++RFDMSE+ ERHT Sbjct: 564 SVRRNRTGMGAAGRPIGSFLFLGPTGVGKTELAKALAGSLFGSEDSMIRFDMSEFGERHT 623 Query: 530 VSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDN 589 VSRL+GAPPGYVG+D+ G LT+ V ++P++++LLDE+EKAHPDVFN+LLQV+D+G LTD Sbjct: 624 VSRLVGAPPGYVGYDEAGQLTERVRRNPYSIVLLDEVEKAHPDVFNLLLQVLDDGRLTDG 683 Query: 590 NGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA-----------MEEIKKIFTP 638 +GR DFRN V++MT+N G K+ G + DA + +++ P Sbjct: 684 HGRTVDFRNTVVIMTSNLGSEFLASKA-GPTGFTAAGDAFGSEKALRDRVLARLRESMRP 742 Query: 639 EFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRA 698 EF NR+D I+ F L + Q+V + E +L +G+ L VS++A +W+AE+GY+ Sbjct: 743 EFLNRIDEIVLFRKLDRAQLRQIVRLMLDETDARLRSQGIGLVVSEDAVDWIAERGYEPE 802 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 GARPM RVIQ L +A+ L+ L GGQVTV+ D Sbjct: 803 YGARPMRRVIQRELDDRIADLLVGSGLAAGGQVTVSAD 840 >UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit clpE n=161 Tax=Bacilli RepID=CLPE_LACLM Length = 748 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 258/643 (40%), Positives = 407/643 (63%), Gaps = 55/643 (8%) Query: 130 SRLDVVNFISHGTRKDEPTQSSDPGSQ-PNSEEQAGGEERMENFTTNLNQLARVGGIDPL 188 S L +F + + PTQ+ G + P + + +E F N+ + AR G IDP+ Sbjct: 67 SALQGQDFNGAASNQTPPTQTGGRGPRGPQNPRAKQPKGMLEEFGINITESARRGEIDPV 126 Query: 189 IGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL 248 IGR++E++R I++L RR KNNP+L+GE GVGKTA+ EGLA +IV GDVP+ + + + L Sbjct: 127 IGRDEEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPQKLQNKEVIRL 186 Query: 249 DIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIK 308 D+ SL+ GT RG FE+R + L+ ++ + + I+FIDEIH I+GAG+A G +DA N++K Sbjct: 187 DVVSLVQGTGIRGQFEERMQKLMDEIRKRNDVIMFIDEIHEIVGAGSAGDGNMDAGNILK 246 Query: 309 PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH 368 P L+ G+++++G+TT E+ I EKD AL RR Q + + EPS++ET+ I+ G++ +YE + Sbjct: 247 PALARGELQLVGATTLNEY-RIIEKDAALERRMQPVKVDEPSVDETITILRGIQARYEDY 305 Query: 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR-------------------- 408 H V+YT +A+ AA L+ +YI DR LPDKAID++DE+G++ Sbjct: 306 HHVKYTDEAIEAAAHLSNRYIQDRFLPDKAIDLLDESGSKKNLTLKFVDPEDINRRIADA 365 Query: 409 -----------------------ARLMPVSKRKKT------VNVADIESVVARIARIPEK 439 ++L + K++ T + DIE +V + +IP Sbjct: 366 ESKKNEATKAEDFEKAAHFRDQISKLRELQKQEVTDEDMPVITEKDIEQIVEQKTQIPVG 425 Query: 440 SVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGV 499 + + ++ L NL D LK V GQD+A++ +++AI+ +R GLG ++P+GSFLF GPTGV Sbjct: 426 DLKEKEQTQLINLADDLKAHVIGQDEAVDKISKAIRRSRVGLGKPNRPIGSFLFVGPTGV 485 Query: 500 GKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKH 556 GKTE+ QL+K L ++RFDMSEYME+H+V++LIGAPPGYVG+++ G LT+ V ++ Sbjct: 486 GKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRN 545 Query: 557 PHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK- 615 P++++LLDEIEKAHPDV ++ LQ++++G LTD GR F++ +++MT+NAG + E Sbjct: 546 PYSLILLDEIEKAHPDVMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGTGKVEASV 605 Query: 616 SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ 675 G + + + ++ F+PEF NR D II F LS + + ++VD + E+ Q+ + Sbjct: 606 GFGAAREGRTKSVLGQLGDFFSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGR 665 Query: 676 KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 + L V+Q A+ L + GY+ AMGARP+ R+IQ+N++ +A+ Sbjct: 666 NDIHLSVTQAAKEKLVDLGYNPAMGARPLRRIIQENIEDSIAD 708 >UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI000198575F Length = 923 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 291/760 (38%), Positives = 433/760 (56%), Gaps = 83/760 (10%) Query: 77 DTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVN 136 D ++S +RV + A+ + ++ G N + ++ + +F+ + A +L++ + VN Sbjct: 165 DVPFSISTKRVFEAAIEYSRTMGYNFIAPEHIAIGLFTVDDGSAGRVLKRLGAN----VN 220 Query: 137 FISHGTRKDEPTQSSDPGSQPNSEEQA-------------------GGEERMENFTTNLN 177 ++ + + GS+P++ + + + F +L Sbjct: 221 HLAAVAVSRLQGELAKDGSEPSATFKGMQGKSFSGKAAIVKSSGKKKEKSALAQFCVDLT 280 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 A G IDP+IGR+ E++R +Q+LCRR KNNP+L+GESGVGKTAIAEGLA I + DVP Sbjct: 281 ARATDGLIDPVIGRDMEVQRVVQILCRRTKNNPILLGESGVGKTAIAEGLAISIAEADVP 340 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + I SLDIG L+AGTK RG+ E R L+ + + N ILFIDE+H ++G+G A Sbjct: 341 SFLLTKRIMSLDIGLLMAGTKERGELEARVTTLISDILKSGNIILFIDEVHMLVGSGIAG 400 Query: 298 ----GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G +D A+L+KP L G+++ STT E+ +FEKD+ALARRFQ + I EPS EE Sbjct: 401 RGNKGSGLDIASLLKPSLGRGQLQCFASTTIDEYVKLFEKDKALARRFQPVLINEPSQEE 460 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 V+I+ GL+ KYEAHH R+T +A+ AAV L+ +YI DR LPDKAID+IDEAG++AR M Sbjct: 461 AVRILLGLREKYEAHHKCRFTLEAINAAVHLSARYIPDRRLPDKAIDLIDEAGSKAR-ME 519 Query: 414 VSKRKK-----------------------------------------TVNVADIESVVAR 432 KRKK V +I V + Sbjct: 520 AYKRKKEKQTSVLLKSPDDYWQEIRAVKAMHEMMIMSMTLSPWIIPIVVGPNEIAVVASL 579 Query: 433 IARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFL 492 + IP + ++ +R L L ++L+ V GQD AI +++ A+K +R GL ++P+ + L Sbjct: 580 WSGIPVQQITADERMLLVGLHEQLRKRVVGQDNAIASISRAVKRSRVGLKDPNRPIAAML 639 Query: 493 FAGPTGVGKTEVTVQLSKA-LGIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 F GPTGVGKTE+ L+ G E ++R DMSEYME+H+VS+LIG+PPGYVG+ +GG L Sbjct: 640 FCGPTGVGKTELAKALAACYFGSEAAMVRLDMSEYMEQHSVSKLIGSPPGYVGYGEGGTL 699 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG- 608 T+A+ + P V+LLDEIEKAHPD+FNILLQ+ ++G LTD+ GR+ FRN ++VMT+N G Sbjct: 700 TEAIRRQPFTVVLLDEIEKAHPDIFNILLQMFEDGHLTDSQGRRVLFRNALVVMTSNVGS 759 Query: 609 --VRETERKSIGL-IHQDNSTD-------AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 + + + SIG I D T MEE+K F PE NRLD I+ F L + Sbjct: 760 AAIAKGRQSSIGFSIADDEPTSYAGMKALVMEELKAYFRPELLNRLDEIVVFHPLEKAQM 819 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 ++++ + E++ +L G+ +EVS + L ++GYD+ GARP+ R + ++ PL+ Sbjct: 820 LEILNTMLQEVKERLSSLGIGMEVSVSVIDLLCQQGYDKNYGARPLRRAVTLIIEDPLSE 879 Query: 719 ELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 LL G V LD N + + H ++ A+ Sbjct: 880 ALLTEEYQPGDIAVVDLDASGNPFVRKQSNRRIHLSDTAY 919 >UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subunit n=67 Tax=Bacilli RepID=C5WHX6_STRDG Length = 763 Score = 503 bits (1296), Expect = e-141, Method: Compositional matrix adjust. Identities = 263/632 (41%), Positives = 390/632 (61%), Gaps = 70/632 (11%) Query: 147 PTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRR 206 PTQ P +QA G +E F N+ +AR G IDP+IGR+ E+ R I++L RR Sbjct: 106 PTQPQTPN------QQAKG--LLEEFGINVTDIARHGDIDPVIGRDDEITRVIEILNRRT 157 Query: 207 KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKR 266 KNNP+L+GE GVGKTA+ EGLA +IV G VP + + LD+ SL+ GT RG FE+R Sbjct: 158 KNNPVLIGEPGVGKTAVVEGLAQKIVDGTVPHKLQGKQVIRLDVVSLVQGTGIRGQFEER 217 Query: 267 FKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 + L++++ Q + ILFIDEIH I+GAG+A G +DA N++KP L+ G+++++G+TT E Sbjct: 218 MQKLMEEIRQRKDVILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNE 277 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + I EKD AL RR Q + + EPS+EET+ I+ G++PKYE +H V+Y+ A+ AA L+ Sbjct: 278 YR-IIEKDAALERRMQPVKVDEPSVEETITILKGIQPKYEDYHHVKYSPAAIEAAAHLSN 336 Query: 387 KYINDRHLPDKAIDVIDEAGAR--------------ARLMP------------------- 413 +YI DR LPDKAID++DEAG++ RL+ Sbjct: 337 RYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLIEAENLKAQATRDEDYERAAY 396 Query: 414 ----VSKRKKT------------VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 ++K K+ + IE+++ + IP + + ++ L NL + LK Sbjct: 397 FRDQIAKYKEMQAQKVDEQDIPIITEKTIEAIIEQKTNIPVGDLKEKEQSQLVNLANDLK 456 Query: 458 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL- 516 V GQD A++ + +AI+ R GLG ++P+GSFLF GPTGVGKTE LSK L IEL Sbjct: 457 AHVIGQDDAVDKIAKAIRRNRVGLGTPNRPIGSFLFVGPTGVGKTE----LSKQLAIELF 512 Query: 517 ------LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH 570 +RFDMSEYME+H V++L+GAPPGYVG+++ G LT+ V ++P++++LLDE+EKAH Sbjct: 513 GSADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAH 572 Query: 571 PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK-SIGLIHQDNSTDAM 629 PDV ++ LQV+D+G LTD GR F++ +++MT+NAG ++E G + ++ + Sbjct: 573 PDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKSEASVGFGAAREGRTSSVL 632 Query: 630 EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNW 689 E+ F+PEF NR D II F LS D + +VD + ++ +L G+ L+V+Q+ + Sbjct: 633 GELSNFFSPEFMNRFDGIIEFKALSKDNLLHIVDLMLEDVNKRLSYNGIHLDVTQKVKEK 692 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 L + GYD MGARP+ R IQD ++ + + L Sbjct: 693 LVDLGYDPKMGARPLRRTIQDYIEDAITDYYL 724 >UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LKK9_9BACT Length = 866 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 296/780 (37%), Positives = 448/780 (57%), Gaps = 91/780 (11%) Query: 30 LLLALLSNPSAREA--LEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRV 87 L L LL N ++R A L + V + ALR +E + L A + T +R+ Sbjct: 57 LFLGLLHNGNSRIADLLRSTGVSIEALRDAIEHQFTVSVETLDAVSDNIILNETC--RRI 114 Query: 88 LQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV------SRLDVVNFISHG 141 L+ +V + +G ++L+AI +++++ +L ++ + S L+ + +S G Sbjct: 115 LRLSVLEARRAGSKMADEDHLLLAILRDKDNKCLPILHQNNITYSGIASLLNPTSEVSAG 174 Query: 142 TRKDEPTQSSDPGSQPNSE----------EQAGGEERMENFTTNLNQLARVGGIDPLIGR 191 + P +P + +Q ++NF T+L +LA +DP+IGR Sbjct: 175 FGVADEAPEGFPDEKPQGDYKHSETKTRDKQTSDTPVIDNFGTDLTKLAADEALDPVIGR 234 Query: 192 EKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 251 E E++R Q+L RR+KNNP+L+GE GVGK+A+ EGLA I+ G VP ++ I SLD+ Sbjct: 235 ENEIQRIAQILSRRKKNNPILIGEPGVGKSAVVEGLANLIISGKVPRILQHRRIVSLDMA 294 Query: 252 SLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL 311 S++AGT+YRG FE R + L+K+L + ILFIDEIHTIIGAG+A G +DAAN++KP L Sbjct: 295 SIVAGTQYRGQFEDRLQRLIKELRAHSEIILFIDEIHTIIGAGSAPGS-LDAANILKPAL 353 Query: 312 SSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDV 371 + G+I+ IG+TT E+ EKD AL RRFQKI + + E+T++I+ LK +YE HH+V Sbjct: 354 ARGEIQCIGATTTDEYRKTIEKDGALERRFQKIQLAPTTPEQTLEILRNLKKRYEEHHNV 413 Query: 372 RYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS---------------K 416 YT A+ A V L +YI+ R LPDKAID +DEAG+R + V K Sbjct: 414 AYTDDALHACVNLTTRYISGRALPDKAIDALDEAGSRVHISGVKVPENIEKLEKCIADLK 473 Query: 417 RKKT------------------------------------------VNVADIESVVARIA 434 R KT V DI ++V+ ++ Sbjct: 474 RHKTEAAKAQNYELAANLRDEVAQLTDKLEHANKDWIDSLKEDRPTVTAEDISTIVSMMS 533 Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 IP + ++Q + LK + L+ V QD+AI L AI R GL +P+G+FLF Sbjct: 534 GIPVQRMAQDESIRLKGMKAALQAKVISQDEAISHLVRAITRNRLGLKGTDRPIGTFLFV 593 Query: 495 GPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD 551 GPTGVGKT + L++ + +L+R DMSEY E+++ SRL+GAPPGYVG+D+GG LT+ Sbjct: 594 GPTGVGKTYLVKCLAEWMFGSKEDLIRIDMSEYGEKYSTSRLVGAPPGYVGYDEGGQLTE 653 Query: 552 AVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE 611 V +HP++V+LLDEIEKAHPDVFN LLQVMD G LTD NG DFRN +++MT+N+G R+ Sbjct: 654 KVRRHPYSVILLDEIEKAHPDVFNTLLQVMDEGRLTDGNGTTVDFRNTIIIMTSNSGTRQ 713 Query: 612 TERKSIGLIHQDNSTD-----AMEEI-----KKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 + G+ ++ +TD +E+I +K F+PEF NRLD+II F L+ ++ Sbjct: 714 LKDFGRGIGFKEAATDDADGKMVEQIIRKALQKQFSPEFLNRLDDIITFHPLTEADAGKI 773 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 D I L+ +L++ +SLE++ A++++ +KG++ GAR + R IQ N++ + + ++ Sbjct: 774 ADLEIGALKERLEKMQLSLELTTAAKDYVVKKGFNVQYGARSLKRSIQANIEDAICDLIM 833 >UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71_CLOTH Length = 803 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 277/631 (43%), Positives = 390/631 (61%), Gaps = 72/631 (11%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ + TNL A+ G ID +IGR +E+ER IQ+L RR KNNP+L+GE GVGKTAIAEGLA Sbjct: 145 LDTYGTNLIVKAKEGKIDRVIGRNREIERVIQILNRRNKNNPVLIGEPGVGKTAIAEGLA 204 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RIV DVP + + +Y LD+ S++AGT++RG FE R K ++++ + N IL IDEIH Sbjct: 205 LRIVNRDVPVKLFNAEVYVLDLTSIVAGTQFRGQFENRMKGIIEECKALGNIILVIDEIH 264 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 I+GAG A G ++AAN++KP L+ G+I+VIG+TT E+ EKD AL RRFQ + + E Sbjct: 265 NIMGAGEAEGA-MNAANILKPALAKGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVDE 323 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 PS+EET++I+ G+K YE++H V+ + + +RAAV L+ +YI DR LPDKAIDV+DEAG+R Sbjct: 324 PSVEETIEILRGIKDYYESYHRVKISDEVIRAAVILSERYITDRFLPDKAIDVLDEAGSR 383 Query: 409 A---------------RLMPVSKRKKTVNVAD---------------------------- 425 A L V + K+ AD Sbjct: 384 ANIKNVVLLEYEALKEELKKVQEEKENAVSADSIEDYQKAADLKVRECKLLQQIKELEQK 443 Query: 426 ----------IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIK 475 I V+ +IP + +++ + + L NL +RL V GQ +A++++ AI+ Sbjct: 444 SKDMELTVDDIAYVIESWTKIPVQRLTEIEAEKLLNLEERLHKRVIGQHEAVKSVARAIR 503 Query: 476 MARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE-------LLRFDMSEYMERH 528 RA KP SF+F GPTGVGKTE L KAL +E L+R DMSEYME+H Sbjct: 504 RNRADFKKRKKP-ASFIFVGPTGVGKTE----LVKALAVELFGSEEALIRLDMSEYMEKH 558 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 TVS+LIGAPPGYVG+D+GG LT+ V + P++V+LLDEIEKAHPDVFN+LLQ++D+G TD Sbjct: 559 TVSKLIGAPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNMLLQILDDGRATD 618 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN----STDAMEEIKKIFTPEFRNRL 644 ++GR F N VL+MT+NAG + SIG + DN E +K+ F PEF NR+ Sbjct: 619 SHGRTVSFENTVLIMTSNAGT-SLKASSIGFAN-DNYIALENKVKEVLKETFRPEFLNRV 676 Query: 645 DNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 D II F+HL+ D + Q+VD ++ +++ K ++++ R ++ EKGYD GARP+ Sbjct: 677 DEIIVFNHLTKDELKQIVDLMFKDVVEEVENKKMTVKFQDGVREFILEKGYDPKYGARPL 736 Query: 705 ARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 R IQ ++ LA L G L +G + V + Sbjct: 737 RRTIQRYIEDELAEMYLKGLLAEGCSIVVGV 767 >UniRef50_A4W448 ATPases with chaperone activity, ATP-binding subunit n=73 Tax=Streptococcus RepID=A4W448_STRS2 Length = 817 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 271/646 (41%), Positives = 399/646 (61%), Gaps = 51/646 (7%) Query: 142 TRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQV 201 T+ +P Q++ ++ Q+GG +E++T +L LAR G ++P+IGR++E+ R +Q+ Sbjct: 166 TKGGKPKQATVGNMMGMTQSQSGG---LEDYTRDLTALARSGQLEPVIGRDEEISRMLQI 222 Query: 202 LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG 261 L R+ KNNP+LVG++GVGKTA+A GLA RI G+VP + + I LD+ +++AGT++RG Sbjct: 223 LSRKTKNNPVLVGDAGVGKTALALGLAQRIANGEVPASLVNMRILELDLMNVIAGTRFRG 282 Query: 262 DFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGS 321 DFE+R ++ +E+D ILFIDE+HTI+G+G+ +DAAN++KP LS G +R +G+ Sbjct: 283 DFEERMNNIINDIEEDGRVILFIDELHTIMGSGSGIDSILDAANILKPALSRGTLRTVGA 342 Query: 322 TTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAA 381 TT E+ EKD AL RRF K+ I EPS+ ++V I+ GLKP YEAHH V + +AV A Sbjct: 343 TTQDEYQKHIEKDAALVRRFAKVTIEEPSVADSVAILQGLKPAYEAHHKVTISDQAVVTA 402 Query: 382 VELAVKYINDRHLPDKAIDVIDEAGA----RAR--------------LMPVSKRKKT--- 420 V A +Y+ ++LPD AID++DEA A RA+ LM + T Sbjct: 403 VAYAKRYLTSKNLPDSAIDLLDEASATVQNRAKGQVEEGGLTALDQALMAGKYKTVTQLL 462 Query: 421 ----------------VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD 464 V DI + ++R++ IP +SQ+D NL L V GQ+ Sbjct: 463 LKAQEAENQATSYSLEVTEEDILATLSRLSGIPVTKLSQTDAKKYLNLEQELHKRVIGQE 522 Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDM 521 +AI A++ AI+ ++G+ H+P GSF+F GPTGVGKTE+ L++ L + L+RFDM Sbjct: 523 EAISAVSRAIRRNQSGIRTGHRPSGSFMFLGPTGVGKTELAKALAEILFDDESALIRFDM 582 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM 581 SEYME+ SRL GAPPGYVG+++GG LT+ V P++VLL DE+EKAHPD+FN+LLQV+ Sbjct: 583 SEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDELEKAHPDIFNVLLQVL 642 Query: 582 DNGTLTDNNGRKADFRNVVLVMTTNAG---VRETERKSIGLIHQDNSTDAMEE-----IK 633 D+G LTD GRK DF N V++MT+N G +R+ + G + S + +E+ +K Sbjct: 643 DDGVLTDRKGRKVDFSNTVIIMTSNLGATALRDDKTVGFGALDLSKSQEHVEKRIFEALK 702 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEK 693 K + PEF NR+D + F L+ + VV + L KG++L++ A LA++ Sbjct: 703 KAYRPEFINRIDEKVVFHSLTEADMQDVVKVMVKPLIAVAASKGITLKLQASALKLLAKE 762 Query: 694 GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 GYD MGARP+ R++Q L+ PLA LL G L G + V + E+ Sbjct: 763 GYDPEMGARPLRRLLQTKLEDPLAEMLLRGELPAGVTLKVGVKAEQ 808 >UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Candida albicans RepID=C4YJT6_CANAL Length = 700 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 256/601 (42%), Positives = 393/601 (65%), Gaps = 19/601 (3%) Query: 156 QPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGE 215 Q EQ +E F ++L QLA+ G +DP+IGR+ E+ R IQ+L RR KNNP+L+G Sbjct: 75 QMQQTEQGDNRPALEKFGSDLTQLAKEGKLDPVIGRDHEIRRTIQILSRRTKNNPVLIGN 134 Query: 216 SGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE 275 +G GKTA+ EGLA RI++G+VP+ M D I +LD+ +++G KYRGDFE + K++LK++E Sbjct: 135 AGTGKTAVMEGLAQRIIRGEVPDSMKDKQIITLDLAGIISGAKYRGDFESKLKSILKEVE 194 Query: 276 Q-DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD 334 + + N ILFIDE H ++G G A G +DA+NL+KP L+ GK+ + G+TT +E+ EKD Sbjct: 195 EKNGNVILFIDEFHLLMGLGKAEGS-IDASNLLKPALARGKLSMCGATTIEEYRKYVEKD 253 Query: 335 RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHL 394 ALARRF + + EP++E+T+ I+ GLK +YE HH VR A+ A + +YI DR L Sbjct: 254 AALARRFSPVTVNEPTVEDTISILRGLKERYEVHHGVRIMDSALVTAALYSNRYITDRFL 313 Query: 395 PDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIA----RIPEKSVSQSDRDTLK 450 PDKAID++DEA + RL S R + D + + I R E +S + L+ Sbjct: 314 PDKAIDLVDEASSTLRLQHES-RPDAIATLDRQIMTIEIELESLRKEEDQLSIDRKHKLE 372 Query: 451 -----NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVT 505 ++ L+ V GQD+AI+A+++A+++ RAGL E++P+ SF+F GPTG GKTE+T Sbjct: 373 KELELDMNILLRQSVVGQDEAIDAVSDAVRLQRAGLTSENRPIASFMFLGPTGTGKTELT 432 Query: 506 VQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLL 562 L++ L + ++RFDMSE+ E+HT+SRLIG+PPGYVG+++ G LT+AV + P++V+L Sbjct: 433 KSLAQFLFNDKNAVVRFDMSEFQEKHTISRLIGSPPGYVGYEESGELTEAVRRKPYSVVL 492 Query: 563 LDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG----VRETERKSIG 618 DE EKAHPD+ +LLQV+D G+LTD++G+K DF+N ++VMT+N G + + G Sbjct: 493 FDEFEKAHPDLSKLLLQVLDEGSLTDSHGKKIDFKNTIIVMTSNIGQEILLADKNTYEDG 552 Query: 619 LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV 678 I+ + + +E ++ + PEF NR+D+I+ F+ LS + +++D + E+ +L K + Sbjct: 553 HINSEVKSQVLENLRHHYAPEFLNRIDDIVVFNRLSKTALKEILDIRLREIGDRLVDKRI 612 Query: 679 SLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 L+++ EA+ L + GYD GARP+ RV++ L PLA L+ G + + V V + Sbjct: 613 ILQLTDEAKTLLCDMGYDPTYGARPLNRVLRKKLLDPLAMRLIKGQVQENETVKVEVKDH 672 Query: 739 K 739 K Sbjct: 673 K 673 >UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0P0_9FIRM Length = 833 Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust. Identities = 310/791 (39%), Positives = 456/791 (57%), Gaps = 98/791 (12%) Query: 24 FMTVEHLLLALL--SNPSAREALEACSVDLVALRQ---ELEAFIEQTTPVLPASEEERDT 78 ++ LLL +L + +A EAL+ C VD + Q E + F + TP E Sbjct: 29 YIGTGQLLLGILHMRDTTAAEALDKCGVDYDSAEQVIREGDGFQDVLTP-------EETP 81 Query: 79 QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFI 138 T QRV+Q A+ + R+ VT ++L+++ +E E A + L+ +N Sbjct: 82 YYTRRAQRVMQGAIDTAREE-RSFVTTEHILLSLLAEGEGTA--------IQTLEDLNVD 132 Query: 139 SHGTRKDEPTQSSDPGSQP---NSEEQAGGEER------MENFTTNLNQLARVGGIDPLI 189 + D Q D P ++ + G + R ++ + T+L A G +DP+I Sbjct: 133 IEALQNDVRAQMEDTEEAPKERSARRKTGKDSRKGLPASLKKYGTDLTAAAGGGELDPVI 192 Query: 190 GREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD 249 GR E++R IQ+L RR KNNPLL+GE+GVGKTAIAEGLA RI G+VP ++ D I +L Sbjct: 193 GRTAEIDRVIQILARRTKNNPLLLGEAGVGKTAIAEGLARRIAAGEVPFLLEDKRIVTLS 252 Query: 250 IGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP 309 + +L+AGTKYRG+FE+R K ++ + + N ILFIDEIHT+I AG A G +DAAN++KP Sbjct: 253 MTALVAGTKYRGEFEERLKNVVDDVVKAKNIILFIDEIHTLIRAGGAEGA-LDAANILKP 311 Query: 310 LLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHH 369 L+ G++++IG+TT E+ F KD ALARRFQ + + EP + QI+ GL+ +YE H Sbjct: 312 ALARGQMQIIGATTLSEYKKYFAKDGALARRFQTVTVDEPGEADAEQILLGLRGRYEEFH 371 Query: 370 DVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP---------------- 413 R AV AAV L+ +Y+ DR LPDKAID++DEA +R R+ Sbjct: 372 HARIEDGAVTAAVRLSRRYLTDRFLPDKAIDLMDEAASRVRMKSVGGTDKLVGLRREIAG 431 Query: 414 VSKRKKT--------------------------------------VNVADIESVVARIAR 435 V K K T V DI VVA+ Sbjct: 432 VVKDKNTAISRQDYETAAKLRDREKELHAKLEASRRSEDTRTEIRVTENDIADVVAQWTG 491 Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 IP + ++ + D L L + V GQD+A+ A+ A++ ARAG+ +P+GSFLF G Sbjct: 492 IPVQRIAAKESDRLLALETHIGRRVIGQDEAVRAVARAVRRARAGVKDPRRPIGSFLFLG 551 Query: 496 PTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 TGVGKTE+ L++A+ G E ++RFDMSEYME+HT +RL+GAPPGYVG+++GG LTDA Sbjct: 552 ATGVGKTELARALAEAVFGTEEAIIRFDMSEYMEKHTTARLVGAPPGYVGYEEGGQLTDA 611 Query: 553 VIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG---- 608 V + P +++L DE+EKAHPDVF++LLQV+++G LTD GR DFRN +++MT+NAG Sbjct: 612 VRRKPFSIILFDEVEKAHPDVFHMLLQVLEDGRLTDGQGRVTDFRNTIIIMTSNAGADHL 671 Query: 609 --VRETERKSIGLIHQDNSTDA----MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 662 R T ++GL + + A +EE++KIF PEF NR+D++I F+ L + ++V Sbjct: 672 RSTRGTIGFAVGLQARADEEQAKKRVLEEVRKIFRPEFLNRVDDMIVFNALGEPELSKIV 731 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 D + +++V+L ++ +++EVS A+ L KG D GARP+ R IQ N++ LA +L Sbjct: 732 DILLRDVKVRLAEQKINIEVSPSAKRVLIAKGADVKFGARPLRRAIQKNIEDALAEHILA 791 Query: 723 GSLVDGGQVTV 733 G ++V Sbjct: 792 RDFASGDSISV 802 >UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,ClpB n=3 Tax=Gammaproteobacteria RepID=A1STR4_PSYIN Length = 828 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 310/808 (38%), Positives = 449/808 (55%), Gaps = 96/808 (11%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEAC--SVDLVALRQELEAFIEQ 64 L +AFA R +T + LL+ALLS P A + L+ + D LR + I Q Sbjct: 28 CLEIAFAELGSLRLNILTSDFLLVALLSQPDSEAHKILQELLPNEDDAPLR--IVGQIRQ 85 Query: 65 TTPVLPASE-EERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 P PAS + R + V + A + G + + + +A F + A Sbjct: 86 KYP--PASNVQARQILASQEIVEVFRVAYDEAKDFGDDYIGTGTLFLAFFHKDAGHVA-- 141 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDP---GSQPNSEEQAGGEERMENFTTNLNQLA 180 D++N + G R D+ Q+ G Q NS++ G + ++ +T +L ++A Sbjct: 142 ---------DILN--NEGIRVDQARQALKHIRRGHQLNSQDAEGKPDILDIYTKDLTEMA 190 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G +DP+IGRE+E+E IQ L RR+KNNP L+GE GVGKT I EGLA RIV DVP+ Sbjct: 191 RKGELDPVIGREEEIELIIQTLSRRKKNNPALIGEPGVGKTVIVEGLAQRIVAADVPDSQ 250 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTIIGAGAASGG 299 + + +LD+G L+AG RG+FE+R K++ +E ILFIDE+HT++GA A SGG Sbjct: 251 LNKRLLALDMGELVAGASMRGEFEERLKSVRDAVIEAGGKVILFIDELHTVVGANAGSGG 310 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA +L+K L+ G ++VIG+ T E+ E D+AL RRF I + EPSIEET+ I+ Sbjct: 311 -IDAPSLLKTALAQGTLQVIGADTLDEYQKYIETDKALERRFHPILVREPSIEETIAILQ 369 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA--RLMPVSK- 416 G P+YE HHD+ Y A AA L+ +YI DR LPDKA+D+IDEAGAR RL + + Sbjct: 370 GAAPRYEKHHDIHYALPAFEAAARLSERYIADRCLPDKAVDLIDEAGARKHLRLTAIPQN 429 Query: 417 ------------RKKT--VNVADIESVVA------------------------------- 431 R KT N + E V A Sbjct: 430 LRDLERKHQGLLRDKTGAFNAQNFEQVAATQMEILKSDQKLKEARSDWQQGRAKEDAMVT 489 Query: 432 ---------RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 R IP + +S+ + L + ++L + GQ+ A+ A+ +AI+ RAG+ Sbjct: 490 SDDIAEVVARWTGIPVARMVESESEKLARMEEKLHQRIVGQEDAVRAVADAIRRNRAGIT 549 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPG 539 + +P+GSFLF GPTGVGKTE+ L+ L ++R DMSEYMERH VS++IGAPPG Sbjct: 550 NSRRPIGSFLFLGPTGVGKTELARALAAFLLDDETRIIRLDMSEYMERHEVSKMIGAPPG 609 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 Y+G+ +GG LT+ V +P+ V+LLDE+EKAHPDVFN+LLQ++++G LTD GRK FRN Sbjct: 610 YIGYGEGGQLTERVRHNPYTVVLLDEMEKAHPDVFNMLLQILEDGQLTDAKGRKVSFRNT 669 Query: 600 VLVMTTNAGV--RETERKSIGLIHQDN-----STD-AMEEIKKIFTPEFRNRLDNIIWFD 651 V++ T+N G +++ IG IH D+ + D M E+KK F PEF NRLD+II F Sbjct: 670 VIIGTSNLGTGSLSPDKRPIGFIHSDSLNYKETQDLVMHEVKKFFKPEFLNRLDDIIVFH 729 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 +L + + Q+ F+ EL ++ +G+ LEV + L+ G+D GARP+ R ++ Sbjct: 730 YLEKEHVRQIAQMFVAELVERMKLRGIVLEVDNAVIDKLSADGFDPIYGARPLRREVERQ 789 Query: 712 LKKPLANELLFGSLVDGGQVTVAL-DKE 738 ++ LA +++ D V V + DKE Sbjct: 790 IENVLAMKVVRNEFSDNSVVQVKMQDKE 817 >UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAZ3_9FIRM Length = 765 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 272/669 (40%), Positives = 410/669 (61%), Gaps = 32/669 (4%) Query: 84 FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTR 143 +R + A+ Q++ + ++L A+ + A LL + +S + V + Sbjct: 92 LRRTMDYALIGAQNAHVSRAEPEHLLCAMLEDDGCAAGLLLAEMGLSLTEAVRECRQLSG 151 Query: 144 KDE-PTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVL 202 + P Q S P G + + +L + A G +DP+ RE EL+R +++L Sbjct: 152 QFVLPAQPRVSASIPR------GSRASDKYCRDLTRRAAEGELDPVFCREAELDRMVEIL 205 Query: 203 CRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGD 262 CRR+KN+P L+GE GVGKTA+AEGLA RI G VP + + +LD+ SL+AGTKYRGD Sbjct: 206 CRRQKNDPCLIGEPGVGKTALAEGLALRIAAGQVPRALQGRRLLALDMASLVAGTKYRGD 265 Query: 263 FEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGST 322 FE+R K LL++L +D +ILFIDE HTI+GAGAA G +DAA+++KP+L+ G++++IG+T Sbjct: 266 FEERLKNLLEELVRDGTAILFIDEFHTIVGAGAAEGA-IDAASILKPVLARGELQLIGAT 324 Query: 323 TYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAV 382 T QEF +KD AL RRF ++ + EP+ + V+I+NGL P+YE +H+VR + ++AAV Sbjct: 325 TNQEFRTHIQKDAALERRFGRVQVEEPTPAQAVEILNGLAPRYERYHNVRLPPQTLQAAV 384 Query: 383 ELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNV---ADIESVVARIARIPEK 439 EL+V+Y+ R LPDKAID++DEA A AR++ K ++T V DI VVA + +P + Sbjct: 385 ELSVRYLPGRCLPDKAIDLVDEACAAARIL-AEKEQRTQPVLTPEDIARVVAAASGVPAQ 443 Query: 440 SVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGV 499 V + +R+ L L RL + GQ +A+ A+ AI+ +R GLG +P+G+ LF GPTGV Sbjct: 444 RVGEQERERLDKLESRLNAEIVGQQRAVAAVAGAIRRSRTGLGEPGRPIGAMLFLGPTGV 503 Query: 500 GKTEVTVQLSKALGIE-------LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 GKT L++AL + LL+FDMSEY E+HT +RL+GAPPGY+G D+GG LT+A Sbjct: 504 GKTA----LARALAVSWFGSEKALLKFDMSEYQEQHTAARLLGAPPGYLGHDEGGQLTEA 559 Query: 553 VIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR-- 610 V + P++V+L DEIEKAHPD+ NILLQ++++G LTD GRKADFRN ++++T+N G R Sbjct: 560 VRRRPYSVVLFDEIEKAHPDIQNILLQILEDGQLTDAMGRKADFRNTIVLLTSNLGARFL 619 Query: 611 ETERKSIGL------IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 + +G + + S A+EE KK F PE RLD +I F L+ + + + +K Sbjct: 620 AGQNAPLGFAAGAEAVFEKQSAQAVEEAKKWFRPELLGRLDEVIVFRPLAEENLCAIAEK 679 Query: 665 FIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 + +L+ + + G L + + A GAR + R + +++ LAN + G+ Sbjct: 680 MLCQLEQRAARSGYRLRHTPQV-GAALAARAQSAYGARELRRQVDRAVEQALANRIAAGT 738 Query: 725 LVDGGQVTV 733 G T Sbjct: 739 ACVGQHWTA 747 >UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Ruminococcaceae RepID=C7H753_9FIRM Length = 777 Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust. Identities = 299/750 (39%), Positives = 448/750 (59%), Gaps = 41/750 (5%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN---PSAREALEACSVDLVALRQE 57 +L++ +EL+ +M ARA HLLLA+L P+ R L ++ A+R++ Sbjct: 31 LLDEAVELAGSMGCARA--------DTGHLLLAMLQTDRGPAGR-FLAGKNITEPAVRRQ 81 Query: 58 LEAFIEQTTPVLPASEEERDT-QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQ 116 L E T PA + +R P L +R + A+ Q++ + ++L A+ + Sbjct: 82 L---AEGRTS--PARQLDRKALAPDL--RRAMDYALIGAQNAHLPKAEPEHLLCAMLEDT 134 Query: 117 ESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNL 176 + A LL V + V + Q PG+ P + G + + +L Sbjct: 135 DCAAGVLLASMGVQLAEAVRECRQIS-----GQFILPGT-PRASAMPRGSRASDKYCRDL 188 Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 + A G +DP+ R+ EL+R +++LCRR+KNNP LVGE GVGKTA+AEGLA RI +V Sbjct: 189 TRRAVDGELDPVFCRDAELDRMVEILCRRQKNNPCLVGEPGVGKTALAEGLAQRIASRNV 248 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA 296 P ++ + +LD+ SL+AGTKYRGDFE+RFK LL++L +D ++ILF+DE HTI+GAGAA Sbjct: 249 PRMLQGRRLLALDMASLVAGTKYRGDFEERFKTLLEELVRDGSAILFVDEFHTIVGAGAA 308 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 G +DAA+++KP+L+ G++++IG+TT QEF +KD AL RRF ++ I EP+ + Sbjct: 309 EGA-IDAASILKPVLARGELQLIGATTDQEFRTHIQKDAALERRFGRVQIEEPTPAQAAA 367 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP--V 414 I+ GL P+YE +H V + +R AVEL+V+Y+ R LPDKAID++DEA A AR+ Sbjct: 368 ILEGLAPRYERYHSVHLPPETLREAVELSVRYLPGRFLPDKAIDLVDEACAAARIRAERE 427 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 K T+ DI VVA+ + +P + V + +R+ L L RL + GQ KA+ A+ AI Sbjct: 428 GKADPTLTREDIARVVAQASGVPVERVGEKERERLDKLESRLNAEIVGQQKAVAAVAGAI 487 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA-LGIE--LLRFDMSEYMERHTVS 531 + +R GLG +P+G+ LF GPTGVGKT + L+ + G E LL+FDMSEY E+HT + Sbjct: 488 RRSRTGLGEPGRPMGAMLFLGPTGVGKTALAKALAASWFGSEKALLKFDMSEYQEQHTTA 547 Query: 532 RLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 RL+GAPPGY+G D+GG LT+AV + P++V+L DEIEKAHPD+ NILLQ++++G LTD G Sbjct: 548 RLLGAPPGYLGHDEGGQLTEAVRRRPYSVVLFDEIEKAHPDIQNILLQILEDGQLTDAMG 607 Query: 592 RKADFRNVVLVMTTNAGVRETERKSIGL--------IHQDNSTDAMEEIKKIFTPEFRNR 643 RKADFRN ++++T+N G R +S L + + S A+EE KK F PE R Sbjct: 608 RKADFRNTIVLLTSNLGARFLAGQSAPLGFAAGSEAVFEKQSAQAIEEAKKWFRPELVGR 667 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 LD +I F L+ D + + +K + +L+ + + G L + LA + GAR Sbjct: 668 LDELIVFRPLAEDSLCAIAEKLLGQLEARAARNGYQLTHTPRVGAVLAARARS-PYGARE 726 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTV 733 + R + +++ LAN++ G+ G T Sbjct: 727 LRRQVDRAVEQALANQIASGTAHTGQHWTA 756 >UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiales RepID=A8MFR5_ALKOO Length = 758 Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust. Identities = 259/629 (41%), Positives = 393/629 (62%), Gaps = 62/629 (9%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ + TNL AR ID +IGR KE++R +Q+L RR KNNP+L+GE GVGKTAIAEGLA Sbjct: 129 LDTYGTNLTDRARNKEIDRVIGRNKEIDRVVQILNRRSKNNPILIGEPGVGKTAIAEGLA 188 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RIV+ VP + + +Y LD+ +++AGT++RG FE R KA++++ ++ N IL IDE+H Sbjct: 189 GRIVEKQVPAKLFNAEVYLLDLTAIVAGTQFRGQFEGRMKAIIEEAQECGNIILVIDEVH 248 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 I+GAG GG ++AAN++KP L+ G+I+VIG+TT E+ EKD AL RRFQ + + E Sbjct: 249 NIMGAGEVHGGVMNAANILKPALARGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVEE 308 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 PS+E+T++I+ G+K YE +H V+ + + + AA +++ +YI DR+LPDKAID+IDEAG+R Sbjct: 309 PSVEDTIEILKGIKGYYEDYHKVKISDEVIEAAAKMSERYITDRYLPDKAIDIIDEAGSR 368 Query: 409 ARL--------------------------------------------------MPVSKRK 418 L + K Sbjct: 369 VNLRNEGLVEIEGLKVELKAIEEKKAEAAKKNDYEKAAQYKVDECRILDRIEELEAEVNK 428 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 + V D+ V+ IP +++ + L +L ++L V GQ A+ +L+ I+ R Sbjct: 429 SALTVEDVAFVIESWTNIPVGKITEEEASRLLSLEEQLHRRVVGQKDAVRSLSRTIRRNR 488 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIG 535 +G + KP SF+F GPTGVGKTE+ L++ L G E ++R DMSEYME+HTVS+LIG Sbjct: 489 SGFRKKRKP-ASFIFVGPTGVGKTELVRALAEELFGSEEAMIRVDMSEYMEKHTVSKLIG 547 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGYVG+DQGG LTD V + P++V+LLDEIEKAHPDVFN+LLQ++++G LTD+ GR Sbjct: 548 APPGYVGYDQGGQLTDKVRRKPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSQGRTVH 607 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE-----IKKIFTPEFRNRLDNIIWF 650 F N V++MT+NAG T+ KS + + +A+E +K+ F PEF NR+D I F Sbjct: 608 FENTVVIMTSNAG---TQIKSGSMGFGNRGYEALENRAKDALKETFRPEFLNRVDETIVF 664 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 LS + + ++++ + ++ + +KG+++ +S ++++ EKGYD GARP+ RVIQ Sbjct: 665 TQLSKEELREIIELMLKDVIEDVKEKGMTITISDAVKDFILEKGYDEKYGARPLRRVIQR 724 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEK 739 +++ +A E + + V G + V L +++ Sbjct: 725 SIEDEIAEEYIKNTFVPGDHIQVDLKEDR 753 >UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mamiellales RepID=A4S065_OSTLU Length = 781 Score = 494 bits (1272), Expect = e-138, Method: Compositional matrix adjust. Identities = 300/737 (40%), Positives = 436/737 (59%), Gaps = 28/737 (3%) Query: 17 AREHRHEFMTVEHLLLALLSN-PSAREALEACSVDLVALRQEL--EAFIEQTTPVLPASE 73 A++ R EH+LLAL N +AL V A R+ L A + + + P ++ Sbjct: 4 AKKFRSAECGSEHVLLALTRNRDRTSKALHKHGVTEEATRRALGERAGVSELELMNPFNK 63 Query: 74 EERDTQPTLS--FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSR 131 + LS ++V +RA S+ +EV + +A+ E S A + E Sbjct: 64 PSAEGLLALSDELKKVFERA-----SASGSEVGSKELALAMIDEPASGARATMAALEGCD 118 Query: 132 LDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGR 191 L V+ G + E + N+++Q + + + +L AR G +DP++GR Sbjct: 119 LKVLRKEITGANERELVGAGK--KTRNTKKQT-----LADCSIDLTAEAREGKLDPVLGR 171 Query: 192 EKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 251 ++E+ R +++L RRRK+NP LVGE GVGKTAIAEGLA I +GDVPE + + + SL IG Sbjct: 172 DEEVTRVMRILVRRRKSNPCLVGEPGVGKTAIAEGLAMMIAKGDVPESLKEKRVVSLQIG 231 Query: 252 SLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ-VDAANLIKPL 310 LLA TKYRG+FE++ K ++++++Q + ILF+DEIH ++GAG +DA NL+KP Sbjct: 232 LLLADTKYRGEFEEKMKNVMEEVKQAGDIILFVDEIHMLVGAGGTGEDGGMDAGNLMKPA 291 Query: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD 370 L+ G+++ IG+TT E+ EKD AL RRFQ + + EPS E+T+ I+ GLK Y+ HH Sbjct: 292 LARGELQCIGATTIDEYRKHIEKDAALERRFQPVRVIEPSPEQTLTILRGLKDTYQEHHG 351 Query: 371 VRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVV 430 V +T +A+RAAV L+ +YINDR LPDKAIDVIDEAGA +L P V+ + I VV Sbjct: 352 VSFTDEALRAAVSLSTRYINDRFLPDKAIDVIDEAGALVQLTP--GDSTLVDESHITEVV 409 Query: 431 ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGS 490 A+ +P + +S + +L N L V GQ +A+ ++++AI+ ARAGL KPV S Sbjct: 410 AQWTGVPVQQLSADESLSLMNFEQELGKRVIGQVEAVRSISQAIRRARAGLADASKPVAS 469 Query: 491 FLFAGPTGVGKTEVTVQLSKA-LGIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 +F+GPTGVGKTE+ +++ G E ++R DMSEYME H+VSRLIG PPGY+GF +GG Sbjct: 470 IIFSGPTGVGKTELAKAVAQTYFGAEKAMVRIDMSEYMESHSVSRLIGPPPGYIGFGEGG 529 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 607 LT+AV +PH+++LLDEIEKAHPDVFNILLQV+++G LTD+ GR DF N +LVMT+N Sbjct: 530 QLTEAVRTNPHSLVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFTNAMLVMTSNI 589 Query: 608 GVRETERKSIGLIHQDNS-----TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 662 G RE G + T E+ K + PEF NRLD II F L + + Sbjct: 590 GSREILESMSGEGEDEEKYKKLQTQVKRELGKEYRPEFLNRLDEIIIFRPLERPEVSAIA 649 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 D + + + +G++L+ + ++ L G+ GARPM R ++ L+ LA +L Sbjct: 650 DLMLASVSKRALARGITLDFTDSFKSLLYSNGFSPRFGARPMRRCVRGLLENNLAECMLD 709 Query: 723 GSLVDGGQVTVALDKEK 739 G G V D ++ Sbjct: 710 GFASSGDTVNFDYDDDQ 726 >UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular organisms RepID=A6X7G2_OCHA4 Length = 964 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 300/806 (37%), Positives = 455/806 (56%), Gaps = 89/806 (11%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVL 69 L A +A E + EHLLLAL S+ + LE VD+ LR+++E ++ Sbjct: 126 LQDAAQKAGEFGRSEVDTEHLLLALTSSDVVKTILEQFKVDVDDLRRQIEKEAKRGDA-- 183 Query: 70 PASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV 129 ++ E P L + L RA G + V ++L+ + E E AA +LRK + Sbjct: 184 -KTDGEIGVSPRL--KDALNRAFIASNELGHSYVGPEHLLIGLAEEGEGLAAAMLRKLGL 240 Query: 130 S----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGI 185 + R V + G E + P + P+ ++ F+ +L +LAR G + Sbjct: 241 TPQALRQQVTKVVGKGA---EEGRVETPSNTPD----------LDQFSRDLTKLAREGKL 287 Query: 186 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTI 245 DP+IGR +E+E I+VL RR+KNNP+L+GE GVGKTAI EGLA RIV G+VPE + D + Sbjct: 288 DPVIGRAREIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPEALRDKRL 347 Query: 246 YSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGGQ-VDA 303 L+I S++AG+KYRG+FE+R + +LK++ ++ +S ILFIDE+HTI+GAG G +D Sbjct: 348 VELNINSMVAGSKYRGEFEERVQKILKEITEEKDSLILFIDEMHTIVGAGQGGGEGGLDI 407 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP 363 AN KP L+ G++ +IG+TT E+ EKD AL RRFQ + + EP++ +T+ I+ GL+ Sbjct: 408 ANTFKPALARGELNLIGATTLNEYQKYIEKDAALERRFQPVYVDEPTVAQTIMILRGLRD 467 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR------------- 410 E+HH V T +A+ AA EL+ +YI R +PDKAID+ID+A AR + Sbjct: 468 TLESHHKVTITDEAIIAAAELSDRYITGRFMPDKAIDLIDQAAARVKISATARPVDVQEL 527 Query: 411 ---------------------------------------LMPVSKRKKTVNVADIES--- 428 L+ + KR + A++ + Sbjct: 528 EAEVAQIKREQDYAAARKQFDRAAELKKELEQKQKELDELLEIWKRDQASATAEVRADHV 587 Query: 429 --VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 +V++I +P ++ ++D L L ++L V GQ++AI A+ +A+++ARAGL Sbjct: 588 AQIVSKITGVPVTELTTEEKDKLLKLEEKLHERVIGQEEAIRAVADAVRLARAGLREGRG 647 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGF 543 P +FLF GPTGVGKTE+ L++ + + ++R DMSEY ERH+V+RL+GAPPGYVG+ Sbjct: 648 PTATFLFLGPTGVGKTELAKTLAEVIFGDQDAIIRIDMSEYGERHSVARLVGAPPGYVGY 707 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 D+GG LT+ V + P++V+LLDEIEKAHPDV+NILLQV D+G LTD GR DF N +++ Sbjct: 708 DEGGQLTEKVRRRPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIA 767 Query: 604 TTNAGV-----RETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 T+N G T+R S ++ ME ++ F PEF NR+D II F L+ I Sbjct: 768 TSNLGSDIIQRNLTKRGSSEFDEAKQKSELMEVLRGHFRPEFINRIDEIIVFHSLNQSEI 827 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 Q+V+ + ++ +GV LE+ + G+ GAR + R+I+ L+ LA Sbjct: 828 RQIVELQLNRVKRTALTQGVELELDVSVVDHFGAVGFRPEFGARELRRLIRSQLETELAR 887 Query: 719 ELLFGSLVDGGQVTVALDKEKNELTY 744 E+L G + DG +V VA +++ + + Sbjct: 888 EMLSGRIEDGDKVRVAWSEDEQRVVF 913 >UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Treponema RepID=B2S3E1_TREPS Length = 814 Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust. Identities = 297/800 (37%), Positives = 440/800 (55%), Gaps = 92/800 (11%) Query: 17 AREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELEAFIEQTTPVLPASEE 74 ARE R + EH+LLAL+ + R + +E D+ +R LE + + + + Sbjct: 21 AREARASLLQPEHILLALIQHKVGRGYKLIEKLIEDVATVRLILEQHVLTNEGDVASPQ- 79 Query: 75 ERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDV 134 D + + +L A +S R G LV F+ +E + Sbjct: 80 --DLPVSGRVKHLLDIAAMEARSL-RCAYIGTEHLVIAFAREEQNPLF------------ 124 Query: 135 VNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER-----MENFTTNLNQLARVGGIDPLI 189 + I G D+ +S S P+S+ ER ++ + T+L + AR G ++P+I Sbjct: 125 QSLIREGLSLDDLRNASIISS-PHSDTTRTRLERKVASVLDEYGTDLTERARAGALNPVI 183 Query: 190 GREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD 249 GR KE+ R IQ+LCRR KNNP+L+GE GVGKT+I EGLA+ IV+ +VP ++ + SLD Sbjct: 184 GRNKEITRVIQILCRRGKNNPVLIGEPGVGKTSIVEGLAYAIVREEVPHILLHTRVVSLD 243 Query: 250 IGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP 309 + +++AGTKYRG FE+R K ++K++E+ ILFIDE+HT+IGAG G +DAAN++KP Sbjct: 244 LAAVIAGTKYRGQFEERLKRIIKEVEETEKVILFIDELHTLIGAGGTQGS-LDAANMLKP 302 Query: 310 LLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHH 369 L+ G+I+ IG+TT E+ FEKD AL RRF+ + + EPS EET I+ +K YE HH Sbjct: 303 ALARGQIQCIGATTLAEYRRYFEKDAALTRRFRSVLVREPSFEETCTILRKIKSHYERHH 362 Query: 370 DVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA---------------------- 407 V Y + A+ VEL+ +YI +R PDKAID++DE GA Sbjct: 363 QVIYQSDALEKIVELSRRYIPERFFPDKAIDLMDEVGAMKRVQQRADTQVLRSFSIKVAN 422 Query: 408 ---------------RARLMP---VSKRKK--------------TVNVADIESVVARIAR 435 RAR + V R++ ++ D+ V+ + Sbjct: 423 LTTETERAIALEDWARARSLHTDVVQLRRRLHALKVEWSAREALSIFAEDVAQAVSLMTD 482 Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 IP S+ + N+ L V GQ +AI L AI AR G+ + +P+GSFLF G Sbjct: 483 IPVHSLEGDELCRFTNIERDLCATVRGQREAIATLARAIVRARVGISSDTRPIGSFLFLG 542 Query: 496 PTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 PTGVGKT + L++ L L+R DMS+YMER+ SRL+GAPPGYVGF+ GGLLT+ Sbjct: 543 PTGVGKTLLAKTLAEFLFGSADALIRIDMSDYMERYNTSRLMGAPPGYVGFENGGLLTER 602 Query: 553 VIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR-- 610 V P +V+LLDEIEKAHPDVFN+LLQV++ G L DN G +FRN +++MT+NAG R Sbjct: 603 VRHRPFSVILLDEIEKAHPDVFNVLLQVLEEGELQDNLGHTVNFRNTIIIMTSNAGTRGL 662 Query: 611 -------ETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVD 663 +T R + ++ A+ EIK+IF+PEF NR+D + F L + + ++++ Sbjct: 663 GENVPGFQTARAR-NIEYRQLRVQALREIKRIFSPEFLNRVDECVVFAPLERETLQEILE 721 Query: 664 KFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFG 723 + +L +L K + L S A+ + E G+D +GARP+ RV+Q ++ LA ++ G Sbjct: 722 CELKKLAERLRGKDIVLRYSAAAKAYCLEHGFDPFLGARPLRRVLQQEIENELALRMIHG 781 Query: 724 SLVDGGQVTVALDKEKNELT 743 +L G V + D + L+ Sbjct: 782 TLRAGSCVHIDSDGARLHLS 801 >UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C6_9ACTN Length = 875 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 274/657 (41%), Positives = 397/657 (60%), Gaps = 72/657 (10%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ + NL +A+ +DP+IGR+KE+ R Q+L RR+KNNPL++G+ GVGKTA+ EGLA Sbjct: 186 LKRYGKNLVAVAQQEKLDPVIGRDKEITRIAQILARRQKNNPLILGDPGVGKTAVVEGLA 245 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 I + P +AD I++LDI S+LAG KYRG+FE R K ++ ++ + TN ILFIDEIH Sbjct: 246 QLIATHNAPVTLADKQIWTLDISSMLAGAKYRGEFEDRLKRVINEVRKATNIILFIDEIH 305 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 TIIGAG+A G +DAA+++KP LS +I+VIG+TT +E+ EKD AL RRFQ +++ E Sbjct: 306 TIIGAGSAEGS-IDAASILKPPLSRSEIQVIGATTAEEYRKHIEKDPALERRFQPVEVCE 364 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA- 407 P++ +T+QI+ GL +YEA H V YT A+ A L+ +YI DR LPDKAIDVIDEAGA Sbjct: 365 PTVSQTLQILKGLSARYEAFHHVHYTQNALVEATRLSHRYIQDRFLPDKAIDVIDEAGAR 424 Query: 408 ---------------RARLMPVSKRKKTV----NVADIESV------------------- 429 R L + ++K+ + N D SV Sbjct: 425 KSVVKRHEPHEIVTMRTALAKLKEKKERLLAHENYEDAASVRDDEKSLEQKIVHAVKDWE 484 Query: 430 -----------VARIARI-------PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 V IAR+ P S+++ + + L L + GQ +A+ + Sbjct: 485 KSRASEQQNVDVNDIARVISDISGVPVTSLTEKESEKLLRCEQELHKRLIGQKEAVAKVA 544 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERH 528 AI+ +R+ L +P GSF+F GP+GVGKTE+ L++ L G + L+ FDMSE+ME+H Sbjct: 545 HAIRRSRSPLKDPARPGGSFIFLGPSGVGKTELAKSLAEFLFGTQEALISFDMSEFMEKH 604 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 VS+L+GAPPGYVG+DQGG LT AV + P++V+L DEIEKAHPDVFNILLQ+++ G LTD Sbjct: 605 EVSKLVGAPPGYVGYDQGGELTKAVRRRPYSVVLFDEIEKAHPDVFNILLQILEEGRLTD 664 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSI---------GLIHQDNSTDAMEEIKKIFTPE 639 GR DF N V++MT+N G RE S GL +++ + E+K+ F PE Sbjct: 665 GQGRVVDFSNTVIIMTSNIGAREIAHTSPMGFSSQGDDGLSYKEIKSRVKSELKRSFRPE 724 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAM 699 F NR+D I+ F LS + + ++V+ + +L +L Q+ + L +S A + +A+KG D Sbjct: 725 FLNRVDEIVVFTTLSKEELRKIVELMVSQLAYRLAQEHIMLTLSDAACDLIAQKGTDPIY 784 Query: 700 GARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 GARP+ R +Q ++ LA +LL G +V V D +++EL + + A K +A Sbjct: 785 GARPLRRTLQRLVEDRLAEDLLEHKWSAGDEVYV--DAQEHELVFKKREADLQKLQA 839 >UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=5 Tax=Lactococcus lactis RepID=Q030Z1_LACLS Length = 816 Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust. Identities = 288/809 (35%), Positives = 465/809 (57%), Gaps = 88/809 (10%) Query: 9 SLNMAFARARE--HRHEFMTVE--HLL--LALLSNPSAREALEACSVDLVALRQELEAFI 62 +L+ F +A E H++++ T+E HLL +A S A L +VD L +LE Sbjct: 11 TLDRIFEKAAEDAHQYQYGTIESAHLLAAMATTSGSIAYSILAGMNVDSSDLLIDLEDL- 69 Query: 63 EQTTPVLPASEEERDTQPTLSF----QRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 S + + L F + V+ A F + V ++L A+ ++ Sbjct: 70 ---------SSHVKVKRSELRFSPRAEEVVTVASFLAVHNNAEAVGTEHLLYALLQVEDG 120 Query: 119 QAAYLLRKHEVSRLDVVNFISH--GTRKDEPTQSSDPGSQPNSEE---QAGGEERMENFT 173 LL+ +++ + + I G + E ++ P S+ + + +++ + Sbjct: 121 FGIQLLKLQKINIVSLRKEIEKRTGLKVPENKKAVTPMSKRKMAKGVAENSSTPTLDSVS 180 Query: 174 TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 ++L + AR G +DP+IGRE E++R I +L RR KNNP+LVGE GVGK+AI EGLA RIV Sbjct: 181 SDLTEAARSGKLDPMIGREAEVDRLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVN 240 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 G VP + + I +L++ +++AGTK+RG+FE R A+++++ D + I+FIDE+HTIIGA Sbjct: 241 GQVPIGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVSADPDVIIFIDELHTIIGA 300 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G DAAN++KP L+ G +++G+TTY E+ EKD AL RR +I++ EPS +E Sbjct: 301 GGGMDSVNDAANILKPALARGDFQMVGATTYHEYQKYIEKDEALERRLARINVDEPSPDE 360 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 + I+ GL+ K+E +H V++T +A+++AV L+V+Y+ R LPDKAID++DEA A ++ Sbjct: 361 AIAILQGLREKFEDYHQVKFTDQAIKSAVTLSVRYMTSRKLPDKAIDLLDEAAAAVKISV 420 Query: 414 VSKRKKTVNVAD---------IESVV---ARIARIPEKSV-------------------- 441 ++ K + + E+V+ + +RI EK+V Sbjct: 421 KNQETKRLELEKDLVKAQEELAEAVIKLDVKASRIKEKAVEKISDKIYKFSIKEEKRQEV 480 Query: 442 --------------------SQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 ++S+ D L NL L V GQ++AI A++ AI+ AR+G+ Sbjct: 481 TDQAVIAVASTLTGVPITQMTKSESDRLINLEKELHKRVVGQEEAISAVSRAIRRARSGV 540 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPP 538 +P+GSF+F GPTGVGKTE+ L+ ++ G E ++R DMSE+ME+H+ SRLIGAPP Sbjct: 541 ADSRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEKHSTSRLIGAPP 600 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+D+GG LT+ V P++V+LLDE+EKAHPDVFNI+LQ++D+G +TD GRK DFRN Sbjct: 601 GYVGYDEGGQLTERVRNKPYSVVLLDEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRN 660 Query: 599 VVLVMTTNAGVRET-ERKSIGLIHQDNSTD-------AMEEIKKIFTPEFRNRLDNIIWF 650 +++MT+N G + K++G ++ + D +EE+K+ + PEF NR+D I F Sbjct: 661 TIIIMTSNLGATALRDDKTVGFGAKNITADYSAMQSRILEELKRHYRPEFLNRIDENIVF 720 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L + I Q+V L +L ++ + ++++ A +AE G+D GARP+ + +Q Sbjct: 721 HSLESQEIEQIVKIMSKSLIKRLAEQDIHVKLTPSAIKLIAEVGFDPEYGARPLRKALQK 780 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEK 739 ++ L+ +LL G + G +++ +K Sbjct: 781 EVEDLLSEQLLSGEIKAGNHISIGASNKK 809 >UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum RepID=C3KS27_CLOB6 Length = 746 Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust. Identities = 265/747 (35%), Positives = 450/747 (60%), Gaps = 36/747 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 LN EL+ L+ A A + H + VE + L N + + L ++D+ L E+ Sbjct: 4 LNNELKQVLSEAKFIAIKFNHTRIEVEDFFIVLAKHKNSNVYKILRLLNIDVKDLINEVV 63 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + + + E + S + ++ +A + + ++L+A+ S+++S Sbjct: 64 SEYKDKNSIRYSQEMLDSIVASDSLKEIIMKASIEAINMKNELIESQHILLAL-SKEDST 122 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 ++ + ++ +S +E +SD E + + +L + Sbjct: 123 LGKKIKNKGIDESKILEGLSKIQFSNEKNYNSDE------------ESFLNKYAIDLTKC 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A + ++GRE EL I++L R+ KNNP+L+GE GVGKTAI EGLA IVQG VP+ Sbjct: 171 ALENKFNMVLGREDELGYVIEILLRKSKNNPVLIGEPGVGKTAIVEGLACLIVQGKVPDE 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEIHTIIGAGAASG 298 + + IYSLD+G+L+AG+K+RG+FE+R K ++ +++ I LFIDE+HT++GAG+ + Sbjct: 231 LKNKKIYSLDLGALVAGSKFRGEFEERLKKVITEIQNSYGQIILFIDEMHTLVGAGS-TD 289 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA+NL+KP L+ G++ IG+TT +E+ EKD AL RRF+ + + EPSIE+T+ I+ Sbjct: 290 GPMDASNLLKPALARGELHCIGATTIKEYRKYIEKDPALERRFKTVLVEEPSIEKTIHIL 349 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 +G+K YE +H+V++ A++AAV L+ +YI++R LPDKAID++DEA AR +++ R Sbjct: 350 DGIKNIYEDYHNVKFNRSAIKAAVTLSSRYISERFLPDKAIDLLDEAAARKKIISKVDRD 409 Query: 419 KTVNV-----ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 + +V +DI +V++ +IP + + + L+NL LK V GQ+KA++A++ A Sbjct: 410 NSSDVIEVKKSDIAEIVSKWTKIPVSDLLEDEARKLRNLESHLKKRVIGQNKAVQAVSNA 469 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL---LRFDMSEYMERHTV 530 + +R L + KP+GSF+F GPTGVGKTE+ L+K L ++ +R DMSEY ++ + Sbjct: 470 VIRSRVCLSNPRKPIGSFIFLGPTGVGKTELACNLAKILFNDIDSVIRIDMSEYQDKSML 529 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 +RLIGAPPGYVG+++GG LT+ V P++++LLDEIEKAH D+ NI+LQ++D+G +TD Sbjct: 530 ARLIGAPPGYVGYEEGGQLTEKVRCRPYSIVLLDEIEKAHRDIVNIMLQILDDGRVTDGQ 589 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIK----KIFTPEFRNRLDN 646 GR +FRN +++MT+N G ++ ++ +D+ ++IK K F+PEF NR+D Sbjct: 590 GRTINFRNTIIIMTSNIGSKD-------ILKEDDEEKLNQKIKKELIKEFSPEFLNRIDE 642 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 I F LS D + +++ + E QL K + + +++ + + + D GARP+ R Sbjct: 643 SIIFKPLSKDSLIKIISLQLREFIAQLQNKNIKVNITENVKLLILDYLEDLQFGARPIRR 702 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTV 733 IQ + P++ +++ G++V+G + + Sbjct: 703 SIQSKIITPISRKIVEGNIVEGDSILI 729 >UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR Length = 643 Score = 485 bits (1248), Expect = e-135, Method: Compositional matrix adjust. Identities = 253/578 (43%), Positives = 373/578 (64%), Gaps = 36/578 (6%) Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 G +D ++GR K++ER Q+LC+RRKNNP LVG+ GVGKT I EGLA IV+G VP + Sbjct: 62 GKLDQVVGRRKQIERVTQILCKRRKNNPCLVGDPGVGKTVIVEGLAANIVKGTVPSKLEG 121 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQV 301 I++LD+ L+AGTK+ GDFE+R ++ +++Q D N +LFIDE+HT++G +G + Sbjct: 122 KKIFALDMARLVAGTKFHGDFEERLTGIVDEVKQSDGNIVLFIDELHTLVG----NGQTL 177 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DA N++KP L+ G+++ IG+TT E+ EKD AL RRF +D+ EPS++E V+I+ G+ Sbjct: 178 DATNILKPALARGELKCIGATTIDEYRRYIEKDGALKRRFLHVDVPEPSVDEAVEILKGI 237 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV--SKRKK 419 + KYEAHHDV+Y +A+ AAV L+ +YI+ LPDKAID+IDEAGAR +L + K Sbjct: 238 QGKYEAHHDVKYADEALVAAVRLSNQYISGLFLPDKAIDLIDEAGARVQLRQARSASEKL 297 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 V DI++VV+ + IP V+ + L N+ L + GQ++A++A++ AI+ AR Sbjct: 298 LVTEEDIQAVVSMVTGIPLDKVTDKESRRLLNMEAELHKYIVGQEEAVKAVSHAIRRARV 357 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE-------LLRFDMSEYMERHTVSR 532 G +KP+ SFLF GPTGVGKTE L+KAL +E ++R DMSEYME+HTVS+ Sbjct: 358 GTKDPNKPIASFLFTGPTGVGKTE----LAKALAVEYFGSKEAVVRIDMSEYMEKHTVSK 413 Query: 533 LIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGR 592 L G+PPGY+G+D GG T+AV H V+L DEIEKAH DV + LQ++D+GTLTD GR Sbjct: 414 LFGSPPGYIGYDDGGQFTEAVRCRAHTVVLFDEIEKAHQDVNRVFLQILDDGTLTDGKGR 473 Query: 593 KADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM----------EEIKKIFTPEFRN 642 K DF+N +++MT+N G LI Q++ D + EE+KK F+PEF N Sbjct: 474 KVDFKNTIIIMTSNIGN--------SLIAQEDEEDEIRFNTVKLIVAEELKKEFSPEFLN 525 Query: 643 RLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 R+D +I F L+ ++++ D + E+ +L K + + V+ + + E+G + + GAR Sbjct: 526 RIDEVIVFRKLNNAQLNEIADLMLAEVYGRLKAKNIIIRVTDGLKRKIIEEGNNLSYGAR 585 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 P+ R I L+ +A +L G + +G V V ++ N Sbjct: 586 PLKRAIVRLLEDNIAKGILNGFVEEGRSVIVDVNSNGN 623 >UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit clpL n=194 Tax=cellular organisms RepID=CLPL_STAAR Length = 701 Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust. Identities = 269/688 (39%), Positives = 395/688 (57%), Gaps = 74/688 (10%) Query: 114 SEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE--EQAGGEERMEN 171 S Q S Y + EVS ++ F G + + +Q+G +E Sbjct: 24 SNQTSNKKYYINGKEVSPEELAQFTQQGGNHSAEQSAQAFQQAALRQQGQQSGNGNYLEQ 83 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 NL Q AR G +DP+IGR+KE++ +VL RR KNNP+LVGE+GVGKTAI EGLA I Sbjct: 84 IGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAI 143 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 V+G+VP + D I S+DI SL AGT+YRG FE+ + L++ ++ N++LF DEIH II Sbjct: 144 VEGNVPAAIKDKEIISIDISSLEAGTQYRGAFEENIQKLVEGVKSSQNAVLFFDEIHQII 203 Query: 292 GAGA--ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 G+GA + G ++++KP LS G+I +IG+TT E+ N KD AL RRF ++ + EP Sbjct: 204 GSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNIMKDAALTRRFNEVLVNEP 263 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA-- 407 S ++TV+I+ G++ K+E HH V+ ++A V+L+++YI R LPDKAIDV+D A Sbjct: 264 SAKDTVEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHL 323 Query: 408 --------------RARLMPVSKRKKT--------------------------------V 421 R + KRK Sbjct: 324 SAQSPAIDKVTTEKRISELEHDKRKAVSAEEYKKADDIQKEIKSLQDKLENSNGEHTAVA 383 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 V DI + R+ IP + +D + LKN+ RL+ + GQDKA+E ++ AI+ RAG Sbjct: 384 TVHDISDTIQRLTGIPVSQMDANDIERLKNISSRLRSKIIGQDKAVEMVSRAIRRNRAGF 443 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPP 538 ++P+GSFLF GPTGVGKTE+ QL+ L L+R DMSEY + VS++IG Sbjct: 444 DDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMSEYSDTTAVSKMIGTTA 503 Query: 539 GYVGFD-QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 GYVG+D LT+ V ++P++V+L DEIEKA+P + +LLQVMD+G LTD G +F+ Sbjct: 504 GYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFK 563 Query: 598 NVVLVMTTNAGV---RETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 N +++ T+NAG +TE K D M E+KK F PEF NR + I+ F HL Sbjct: 564 NTIIICTSNAGFGNGNDTEEK-----------DIMHEMKKFFRPEFLNRFNGIVEFLHLD 612 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 D + +V+ + ++QV LD+KG++++VSQ+A++WL E+GYD +GARP+ R+++ ++ Sbjct: 613 KDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRD 672 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNEL 742 + + L + V V +D E NEL Sbjct: 673 KITDYYLDHTDVK----HVDIDVEDNEL 696 >UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5LIJ2_9ALVE Length = 895 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 263/593 (44%), Positives = 378/593 (63%), Gaps = 32/593 (5%) Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 G +E+ NL LAR G + +GR+ E+ R IQVL R KNNP+L+GE GVGKTA+A Sbjct: 301 GGSVLESCGRNLTALAREGKLLKCVGRDAEIGRMIQVLSRMTKNNPVLLGEPGVGKTAVA 360 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILF 283 EG+A I +G+VP +A I+ + IGSLLAGTKYRG+FE+R K L+K+ + D IL Sbjct: 361 EGMAELIARGEVPTHLAGVAIWDVSIGSLLAGTKYRGEFEERLKRLVKEATDADGKIILL 420 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDE+HTI+GAGA G +DAAN++KP LS G++RVIG+TT E+ KD AL RRFQ Sbjct: 421 IDELHTIVGAGATGDGAIDAANILKPALSRGELRVIGATTQSEYDKYIAKDPALERRFQP 480 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + + EP+ + V ++ G+ YE HH VR+T A+ A V+L+ +YI R LPD A D +D Sbjct: 481 VVVPEPTQAQAVDMLMGVASLYEEHHFVRFTDDAIEACVKLSSRYIPSRRLPDSAFDAMD 540 Query: 404 EAGARARLMPVSK--RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF 461 EA AR R+ ++ + VN D+ VA+ IP + +++ + L ++ +RL V Sbjct: 541 EAAARKRIQQGARPSSRIEVNANDVAQTVAQWTGIPLEELTKDESARLLHMEERLDSRVI 600 Query: 462 GQDKAIEALTEAIKMARA---GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL----GI 514 GQ +A A+ AI+ AR G+G++ +P FLF GPTGVGKTE++ LS G Sbjct: 601 GQKRATSAVARAIRRARVGVRGIGNK-RPTACFLFCGPTGVGKTELSKALSDEYFGEEGR 659 Query: 515 ELLRFDMSEYMERHTVSRLIGAPPGYVGFD--QGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 ++R DMSE+MERH+VS+LIG+PPGYVG+D GG+LTD V + PH+++L+DE+EKAHPD Sbjct: 660 NMIRLDMSEFMERHSVSKLIGSPPGYVGYDSNSGGVLTDRVRRQPHSLVLIDEVEKAHPD 719 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEI 632 V NILLQVMD+G LTD++GR ADF NV+LVMT+N G +ME++ Sbjct: 720 VLNILLQVMDDGRLTDSHGRLADFSNVILVMTSNVG------------------SSMEDL 761 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLA 691 K+ F PEF NR+D +I FD L+ + I ++V ++ LQ L +Q + L+V+ L Sbjct: 762 KRHFRPEFINRIDEVIAFDSLTEEDIVRIVGLYVSRLQAALKEQHSIDLKVTDGLTAALG 821 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 ++GY GAR + RV+Q ++ P+A +L + G ++ D E++ + + Sbjct: 822 KEGYSAEFGARHLNRVMQARIEDPIAELILREEIHRGEELIADYDSERDMIVF 874 >UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG60_9BACT Length = 802 Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust. Identities = 286/804 (35%), Positives = 445/804 (55%), Gaps = 102/804 (12%) Query: 12 MAFARAREHR--HEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTP 67 + FAR R + EH+LL LL S A E +D+ L +++ E+ Sbjct: 13 ILFAREASERLMQTSIDTEHILLGLLRERSGLAAEIFSRRGIDVSMLMNDVKGVSEKGHN 72 Query: 68 V-----LPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 + LP S+ ++ VL +V ++ V ++L+ + E++ +A+ Sbjct: 73 LMIKGSLPFSQNGKN---------VLDFSVEEAKNLKNKYVNTEHILLGLLKEKKGKASM 123 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 LL K D+V E Q+ N+++ ++ F +L +LA Sbjct: 124 LLSKLG---FDLVTL-------REEIQTVSKSYAKNTDQAV--TPTLDEFGRDLTKLAMD 171 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 G +DP+IGR E+ R IQ+L RR KNN +++GE GVGKTAI EGLA ++ DVP+ + + Sbjct: 172 GKLDPVIGRSTEITRLIQILGRRIKNNAVIIGEPGVGKTAIVEGLALKMASEDVPDFLRN 231 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 ++SL++G+++AGTKYRG FE+R K L+K++E D N I+FIDEIHTI+GAGAA G +D Sbjct: 232 KRLFSLELGNVVAGTKYRGQFEERMKNLIKEIETDGNVIIFIDEIHTIVGAGAAEGS-ID 290 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 A+N++KP L+ G + IG+TT EF FEKD AL RRFQ I + +P +ETVQI++G+K Sbjct: 291 ASNMLKPALARGVFQCIGATTLSEFRKNFEKDGALNRRFQTISVDQPDADETVQILDGIK 350 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL----MP----- 413 YE H V + L +YI ++ PDK+IDV+DEA +R +L MP Sbjct: 351 RFYEDFHKVFIPHDVLEEITRLTDRYITEKFQPDKSIDVLDEACSRLKLATRTMPDDMVR 410 Query: 414 -----------------------VSKRKKTV-------------------------NVAD 425 + K K V + + Sbjct: 411 IKNKLEQLKGLRDEKLRANDYDNIQKYSKDVERWATKLSVAQKEWEEELDLDWPTLTIEN 470 Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VVA + +P + + D + N+ +K + GQD+A++AL+ ++K + AGL + Sbjct: 471 ISEVVAHMTGVPVQKLQTDDMARIANIDKDIKEFIIGQDEAVDALSRSVKRSFAGLSNPA 530 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKA-LGIE--LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+GSF+F GPTGVGKTEV +L++ G E L+R DM+EYMER SRLIGAPPGYVG Sbjct: 531 RPLGSFIFMGPTGVGKTEVAKKLAETVFGSESSLIRIDMTEYMERFNSSRLIGAPPGYVG 590 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 +++GG LT+ V + P++V+L DEIEKAHP+V NILLQ++D+G + D+ G K +F+N +++ Sbjct: 591 YEEGGKLTEQVRRKPYSVVLFDEIEKAHPEVLNILLQILDDGHINDSLGHKVNFKNTIII 650 Query: 603 MTTNAGVR-ETERKSIGLIHQDN----------STDAMEEIKKIFTPEFRNRLDNIIWFD 651 MT+N G + RK++G ++ ST+A E+K F PEF NR+D+++ F Sbjct: 651 MTSNLGTKLSMNRKTLGFDTKEESNNEIDYDVFSTNAHRELKDRFPPEFINRVDSLVVFK 710 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L + +++D ++E+ +L+ G L + Q+ + L Y+ + GARP+ R++Q Sbjct: 711 PLGKAELIEIIDLQLIEINKRLEIAGKQLTIDQDVKEHLLSGEYEYSYGARPIKRLLQSK 770 Query: 712 LKKPLANELLFGSLVDGGQVTVAL 735 ++ PL+ LL G + V + Sbjct: 771 IEDPLSEILLEGKFAKRKNLKVKM 794 >UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding subunit, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CMZ1_STRSV Length = 747 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 255/631 (40%), Positives = 400/631 (63%), Gaps = 27/631 (4%) Query: 103 VTGANVLVAIFSEQESQAAYLLRKHEVSRLDV---VNFISHGTRKDEPTQSSDPGSQPNS 159 VT ++++++F +Q + L++ + + V +N G R P+Q S Sbjct: 107 VTVEHLILSLFHQQRNPITVFLKQAGIDKELVAAKLNKARQGKRAISPSQES-------- 158 Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 QA + + TN NQ +IGR+ E++ I+VLCR+ K+N +L+G GVG Sbjct: 159 RYQA-----LSKYATNFNQWLADQTDRQVIGRKDEIDDIIRVLCRKEKSNAILLGFPGVG 213 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDT 278 K+ + EG+ R++ DVPE + ++ L++G L+AGTKYRG+FE+RFKA+L + L Sbjct: 214 KSKVIEGVVGRLLADDVPEHLLGKEVFKLNLGGLIAGTKYRGEFEERFKAVLDEVLVAKG 273 Query: 279 NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALA 338 IL+I++IH I+ AG G +DA NL+KPLL+ G+I +IG+TT+ + FE D+AL Sbjct: 274 KIILYIEDIHQIVTAGRTEGS-LDAGNLLKPLLAQGQINIIGTTTFAAYRESFELDQALE 332 Query: 339 RRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKA 398 RFQ++ I EP ++ + I+ GL+ Y+ H VR T +A++AA+ L+++Y++DR+LPDKA Sbjct: 333 GRFQRVRIEEPDQDKALAILQGLRENYQDFHGVRLTDEALQAAISLSIRYLSDRYLPDKA 392 Query: 399 IDVIDEAGA--RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL 456 +D+IDEA A + +L + V+ DI S+V RI I + + ++R+ L NL L Sbjct: 393 LDLIDEACAVKKIQLGQAQTERPDVSREDIASIVERITGIKVQGIMDNEREHLLNLDKLL 452 Query: 457 KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---G 513 + + GQD+A++ ++EAI +RAG+ + +P+GSFLF GPTGVGKT + L++ L Sbjct: 453 RQRIVGQDQAVQKVSEAILRSRAGIQNPKRPIGSFLFLGPTGVGKTALAKALAERLFGNE 512 Query: 514 IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV 573 +E++R DMSEYME+H V+RL+G PPGYVGF++GG LT+AV + ++++LLDEIEKAHPDV Sbjct: 513 LEMVRLDMSEYMEKHAVARLVGPPPGYVGFEEGGQLTEAVRRRLYSIVLLDEIEKAHPDV 572 Query: 574 FNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG---VRETERKSIGLIHQDNSTDAME 630 FN LLQV+D G LTD+ GR DF+N +L+MT+N G + E+ + GL + + + Sbjct: 573 FNTLLQVLDEGRLTDSKGRTIDFKNTILIMTSNIGSQQILESLKSEQGLT-AETQEEVLS 631 Query: 631 EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWL 690 ++ F PEF NR+D + F+ L + + +V + +LQ +L+ + + L +S+E +L Sbjct: 632 LLQHSFKPEFLNRIDETVVFNPLRAEDMINIVKIMVRQLQERLEHQKIQLHLSEEVYAFL 691 Query: 691 AEKGYDRAMGARPMARVIQDNLKKPLANELL 721 A+KGY GARP+ R I L+ PLA L+ Sbjct: 692 AQKGYQPEFGARPIQRSIMRYLETPLARYLV 722 >UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6K4_9BACT Length = 826 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 291/803 (36%), Positives = 438/803 (54%), Gaps = 90/803 (11%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPSAREA--LEACSVDLVALRQELEAFIEQTT 66 +L +A A + R + + HLLL + + ++ A LEA V LR+ L+ I++T Sbjct: 13 ALQIAHREALKMRSKEIGTAHLLLGIAAEGTSSAAGLLEANGVTAEGLRRTLK--IDETI 70 Query: 67 PVLPASEEERDTQPTLSF----QRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 P E D Q L F + L A+ +S V + +L A+ ++ A Sbjct: 71 P-------EPDEQTDLPFSDGARGCLDAALNSARSLDAELVDPSCLLAAVLKVNDNGACR 123 Query: 123 LLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 LL VS R ++ R++ P S G+ E + + F +L Sbjct: 124 LLATLGVSPETLRERAAELLASSKREESPVHSPKAGNGEGDEAELA---IIGQFCVDLTA 180 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A G +DP++GR+KE R +QVLCRR KNNP+LVG+ GVGKTA+ EGLA I VP+ Sbjct: 181 RAAAGELDPIVGRQKETRRLMQVLCRRTKNNPVLVGDPGVGKTAVVEGLAQLIQSEMVPD 240 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + I L++GSL+AG KYRGDFE+RF+ L+ Q + + ILFIDEIHT+IG G A G Sbjct: 241 PLKGKKILQLNVGSLVAGAKYRGDFEERFQKLIAQASK-SKDILFIDEIHTLIGTGNAEG 299 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DAAN++KP L+ G++R+IG+TT E+ E+D AL RRFQ IDI EP + V I+ Sbjct: 300 -SLDAANMLKPSLARGELRIIGATTAAEYRRYIERDGALERRFQPIDIAEPDFDSAVAIV 358 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL-----MP 413 +GL P+YE HH V Y +A AV L+ +++ DR LPDKAID+IDEAGA+A+L P Sbjct: 359 SGLLPRYEEHHGVVYAPEAAETAVRLSSRFLTDRRLPDKAIDLIDEAGAKAQLDRSDWPP 418 Query: 414 VSKRKKT------------VNVADIE---------------------------------- 427 K KT + AD E Sbjct: 419 ELKEVKTRLGQLRRDKEAAILAADFELAGRFRSDEAETAQQLEENLSVWRRGRRMSGSRV 478 Query: 428 ------SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 V++ +P +SQS+ + L L R++ + GQ +A+ + A++ R+GL Sbjct: 479 GPDDLAQVLSSWCGVPVGQMSQSEAERLLTLESRVEKHLIGQSEAVSCVCRALRRNRSGL 538 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPP 538 E +P+GSFLF GP+GVGKTE+ +++ L L+ DMSE+ +R+TVSRLIG P Sbjct: 539 QDEKRPIGSFLFLGPSGVGKTELARVVARELYGSDKALIALDMSEFHDRYTVSRLIGTGP 598 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG++ G LT+AV +HP++V+LLDEIEKA P V ILLQ+M++G LTD +G DFRN Sbjct: 599 GYVGYEDRGQLTEAVRRHPYSVVLLDEIEKADPQVNRILLQIMEDGRLTDGHGDTVDFRN 658 Query: 599 VVLVMTTNAGVRETERKSIGLIHQDNSTDAM-----EEIKKIFTPEFRNRLDNIIWFDHL 653 +++MT+N G RE + G S A +E+K+ F PE R+D++++F L Sbjct: 659 ALIIMTSNLGSREAAKSPFGFSDAGRSDQAARGVMSDELKRFFPPELLGRMDDVVYFRQL 718 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + + ++ D + +L ++G+ VS + + + ++ + GARP+ R+++ + Sbjct: 719 NAEDLSKIFDLLLAPAVQRLKRRGIDFSVSPQLKLAILDEAARQGAGARPLRRLVEKRVS 778 Query: 714 KPLANELLFGSLVDGGQVTVALD 736 P A E L + G++ +L+ Sbjct: 779 DPTA-EWLIANPGASGELVCSLE 800 >UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax=Prevotella copri DSM 18205 RepID=D1PA52_9BACT Length = 892 Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust. Identities = 257/652 (39%), Positives = 389/652 (59%), Gaps = 77/652 (11%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ F+ +L + A G +DP++GREKE++R +++L RR+KNNP+L+GE GVGK+AI EGLA Sbjct: 239 IDKFSFDLTKAAAEGKLDPVVGREKEIQRVLEILGRRKKNNPVLIGEPGVGKSAIVEGLA 298 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 I + + + + SLD+ +++AGTK+RG FE+R K ++K+LE I+FIDEIH Sbjct: 299 QLINNQETSPMFFNKRLVSLDLTAIVAGTKFRGQFEERIKNVIKELENHPEIIIFIDEIH 358 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 T+IGAG+ G +DAAN++KP L+ G I+ IG+TT E+ EKD AL RRFQK+ + Sbjct: 359 TMIGAGSGEGS-MDAANILKPALARGIIQCIGATTLDEYRKSIEKDGALERRFQKVLVEP 417 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 + EET+ I++ +K YE HH VRYT +A+ A V+L +YI DRH PDKAIDVIDEAG+R Sbjct: 418 TTREETLLILHNIKQHYEKHHCVRYTDEALEACVKLTERYITDRHFPDKAIDVIDEAGSR 477 Query: 409 ARL----MP-------------VSKRKKTV------------------------------ 421 + +P +SK+++ V Sbjct: 478 VHINNASVPAPYIKLEKELKKIISKKQQAVANQNFEMAASCRDAQTKIEKEIEDMKAQWQ 537 Query: 422 ----------NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 DI +V++ + +P + +++ + LK+L LK V QD AI + Sbjct: 538 QGEIGEYVEVTAEDIANVISMMTGVPAQRMAEGESKRLKDLEHNLKHKVIAQDNAINKMV 597 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERH 528 + I R GL + P+G F+F GPTGVGKT + +L++ + L+R DMSE+ E Sbjct: 598 KTILRNRVGLRDPNHPIGVFMFLGPTGVGKTYLAQKLAEEMFGSKDSLIRIDMSEFSESF 657 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 SRL+GAPPGYVG+++GG LT+ V + P++++LLDEIEKA+ VFN+LLQV+D G LTD Sbjct: 658 NTSRLVGAPPGYVGYNEGGQLTEKVRRKPYSIVLLDEIEKANSKVFNLLLQVLDEGRLTD 717 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD---AMEE-------------I 632 NGR DFRN +++MT+NAG R+ + G+ AM+E + Sbjct: 718 GNGRLIDFRNTIIIMTSNAGTRQLKDFGRGVGFTSAGIKGGLAMDEKDKEYARSIVQKSL 777 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAE 692 K F PEF NRLD+II FD L + I +++D + L ++++ G +++++A+ +A+ Sbjct: 778 SKQFAPEFLNRLDDIITFDQLDLNAIKRIIDLDLEGLVKRIEELGFHFQITEKAKEMVAK 837 Query: 693 KGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 KGYD GARP+ R IQ ++ + LL G++ G ++V + +K ELT+ Sbjct: 838 KGYDVQFGARPLRRAIQTYIEDSVCEMLLDGTMKPGDTISVGKNSKKEELTF 889 >UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding subunit n=1 Tax=Rhodococcus opacus B4 RepID=C1ASB5_RHOOB Length = 748 Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust. Identities = 252/586 (43%), Positives = 370/586 (63%), Gaps = 36/586 (6%) Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 ++ +L +LA +DP++GR+ E+ER IQVL RRRKNNP+L+G+ GVGKTAIAEGLA RI Sbjct: 170 YSRDLTELAFRAELDPVVGRDAEIERVIQVLSRRRKNNPVLIGDPGVGKTAIAEGLAQRI 229 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTI 290 V GDVP + + + +LD+G+L+AG YRG+FE R K+LLK + D I+FIDE+HTI Sbjct: 230 VAGDVPAALLNRRVIALDVGALVAGATYRGEFEDRVKSLLKDVVGADGGIIVFIDELHTI 289 Query: 291 IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 350 +GAGAA G VDA NL+KP+L+ G+ R +G+TT E+ E D AL RRFQ + + EPS Sbjct: 290 VGAGAAEGA-VDAGNLLKPMLARGEFRTLGATTLDEYRKHVESDGALERRFQPVRVDEPS 348 Query: 351 IEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR 410 ++++ GL+ +YE+HH V T A+ AAV L+ +YI DR LPDKAID+IDEA +R R Sbjct: 349 SANALEMLRGLRSRYESHHGVAITDAALSAAVSLSDRYIADRFLPDKAIDLIDEACSRRR 408 Query: 411 LMPVSKRKKT----------VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 + S T V+ DI +V + IP + + + + L ++ RL V Sbjct: 409 IQSDSLSSVTRGAGSCTPPLVDDDDIARLVGQWTGIPVSRLQEEELERLVHMEHRLAERV 468 Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELL 517 GQ KA+ ++ A++ +R GL ++P+ S +F GP GVGKT + L+ + G L+ Sbjct: 469 VGQAKAVVGVSAALRNSRTGLSDPNRPIASLMFCGPLGVGKTYLARVLADVMLDSGEALV 528 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 + DMS+Y E+H+V+RL+GA PGYVG+++GG LTDAV + P+ V+LLD+IE+AHPDV +L Sbjct: 529 QLDMSDYAEKHSVTRLVGASPGYVGYEEGGQLTDAVRRRPYCVVLLDDIEQAHPDVHGLL 588 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFT 637 QV+D+G+LTD GR FR+V+LVMT++ +G ++Q F Sbjct: 589 RQVIDDGSLTDGQGRVVSFRHVILVMTSSL-------PDLGAVNQH------------FR 629 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDR 697 EF RLD+++ F L + Q+VD + + +L +G++LE++ EAR +AE G D Sbjct: 630 AEFLTRLDDVLEFAPLRRKDLEQLVDIQVRSVAARLSDRGIALELTHEARALIAELGDDS 689 Query: 698 AMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 GARP+ RV+Q L ++ +L G G T+ +D+E +T Sbjct: 690 RQGARPLVRVVQKELISAVSRSILLGDACPGD--TIRVDQEGTSVT 733 >UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AYE5_HERA2 Length = 776 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 287/776 (36%), Positives = 438/776 (56%), Gaps = 58/776 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 LN ++ + +A AR H F+ EHLLL LL +E L V + EL F Sbjct: 8 LNPNIQHIMLLAQEEARSLNHSFLGPEHLLLGLLRQ---KEGLA------VQILHELGVF 58 Query: 62 IEQT-----TPVLPASEEERDTQPTL-----SFQRVLQRAVFHVQSSGRNEVTGANVLVA 111 QT T + P + +E+ P + +L A + ++ +L+A Sbjct: 59 YPQTRQIIQTMITPHARDEQTLLPAYLPLAPHTKTLLDTAAREADQLNQQQIGPEQLLLA 118 Query: 112 IFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN 171 + E + Y+L + + V + + H + + T+ + A + Sbjct: 119 LAREAKGFVPYILARLGLHGSIVCDSL-HAALQAKATEVA--------PAHAADTSLLAK 169 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 NL + AR G +DP+IGR E+ER IQ+L RR KNN +L+GE GVGKTAI EGLA ++ Sbjct: 170 LGINLTEEARNGRLDPVIGRSAEIERTIQILRRRTKNNVVLIGEPGVGKTAIVEGLAQQL 229 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 G +P +++SLD+GSLLAG YRG FE+R K+++ Q+ D ++ILFIDE+H I+ Sbjct: 230 AHGAIPS-FQKTSVWSLDVGSLLAGAIYRGQFEERLKSVIDQIS-DHDAILFIDELHMIV 287 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 GAGA S VDAAN++KP L+ GK+RVIG+TT+ E+S EKD AL RRFQ I + EP I Sbjct: 288 GAGA-SENTVDAANMLKPALARGKLRVIGATTFDEYSQHIEKDSALKRRFQPIVVQEPGI 346 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR--- 408 EETV I+ G++PKYEAHH++ + +A+ A LA +YI D +LP KAID++DEA +R Sbjct: 347 EETVTILQGIRPKYEAHHELSLSDEALYTAARLAAQYIPDLYLPGKAIDLLDEAASRVWY 406 Query: 409 -------ARLMPVSKRKKTVNVA--DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 A S T V D+ V+A IP + + ++++ L Sbjct: 407 YRQRQLVAHDAASSAEAPTTVVCGRDVAQVLAIQTGIPLAQLFSDGLNRIEDIEQILSQR 466 Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIEL 516 V GQ +AI +T+AI+ A AGL + +G+ LF GP+GVGKTE++ L++ L L Sbjct: 467 VIGQAQAIRGVTKAIQRAFAGLKTKQDLIGALLFLGPSGVGKTELSKVLAEYLLGSNKAL 526 Query: 517 LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNI 576 +R DMSEY E H+VSRLIGAPPGY+G+DQGG L+++V + P++V+LLD I+ AHPDV NI Sbjct: 527 IRMDMSEYAEAHSVSRLIGAPPGYIGYDQGGQLSESVRRRPYSVVLLDNIDYAHPDVINI 586 Query: 577 LLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKS-IGLIHQDNSTD-------- 627 +Q+++ G++TD GR DFRNV+L+ T N G +R++ +G + D Sbjct: 587 FIQILEEGSITDARGRYVDFRNVLLLCTANVGTELFKRQTGLGFRAELPEIDQVARYEHL 646 Query: 628 ---AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQ 684 A+++IK + +F +RL+++I F L + + + F+ +++ + + L+++ Sbjct: 647 KQQALDKIKTSLSLDFLHRLNDVILFQPLQAEHLEVLAGLFLQDVRQMVLAHEIRLDLTS 706 Query: 685 EARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 A +L + GYD G R + +IQ ++ P++N LL G G ++ + D N Sbjct: 707 NAHTYLTDHGYDLERGVRRLRHLIQTHIVDPISNGLLHGKYRAGDELLIDCDLSGN 762 >UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular organisms RepID=ERD1_ARATH Length = 945 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 287/763 (37%), Positives = 421/763 (55%), Gaps = 102/763 (13%) Query: 77 DTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLR----------- 125 D ++S +RV + AV + ++ + ++ V +F+ + A +L+ Sbjct: 165 DMPFSISTKRVFEAAVEYSRTMDCQYIAPEHIAVGLFTVDDGSAGRVLKRLGANMNLLTA 224 Query: 126 ------KHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 K E+++ S + P GS P ++ + +E F +L Sbjct: 225 AALTRLKGEIAKDGREPSSSSKGSFESPPSGRIAGSGPGGKK---AKNVLEQFCVDLTAR 281 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G IDP+IGREKE++R IQ+LCRR KNNP+L+GE+GVGKTAIAEGLA I + P Sbjct: 282 ASEGLIDPVIGREKEVQRVIQILCRRTKNNPILLGEAGVGKTAIAEGLAISIAEASAPGF 341 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS-- 297 + I SLDIG L+AG K RG+ E R AL+ ++++ ILFIDE+HT+IG+G Sbjct: 342 LLTKRIMSLDIGLLMAGAKERGELEARVTALISEVKKSGKVILFIDEVHTLIGSGTVGRG 401 Query: 298 --GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 G +D ANL+KP L G+++ I STT EF + FEKD+ALARRFQ + I EPS E+ V Sbjct: 402 NKGSGLDIANLLKPSLGRGELQCIASTTLDEFRSQFEKDKALARRFQPVLINEPSEEDAV 461 Query: 356 QIINGLKPKYEAHHDV---------------RYTA------KAV--------RAAVE--- 383 +I+ GL+ KYEAHH+ RY A KA+ RA +E Sbjct: 462 KILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIADRFLPDKAIDLIDEAGSRARIEAFR 521 Query: 384 --------LAVKYIND------------------RHLPDKAIDVIDEAGA---RARLMPV 414 + K ND R D + DE+G + L P Sbjct: 522 KKKEDAICILSKPPNDYWQEIKTVQAMHEVVLSSRQKQDDGDAISDESGELVEESSLPPA 581 Query: 415 SKRKKTVNVA--DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTE 472 + + + V DI +V + + IP + ++ +R L +L D+L+ V GQD+A+ A++ Sbjct: 582 AGDDEPILVGPDDIAAVASVWSGIPVQQITADERMLLMSLEDQLRGRVVGQDEAVAAISR 641 Query: 473 AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS-KALGIE--LLRFDMSEYMERHT 529 A+K +R GL +P+ + LF GPTGVGKTE+T L+ G E +LR DMSEYMERHT Sbjct: 642 AVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHT 701 Query: 530 VSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDN 589 VS+LIG+PPGYVGF++GG+LT+A+ + P V+L DEIEKAHPD+FNILLQ+ ++G LTD+ Sbjct: 702 VSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDS 761 Query: 590 NGRKADFRNVVLVMTTNAG---VRETERKSIGLIHQDNSTDA---------MEEIKKIFT 637 GR+ F+N +++MT+N G + + SIG I D+ A +EE+K F Sbjct: 762 QGRRVSFKNALIIMTSNVGSLAIAKGRHGSIGFILDDDEEAASYTGMKALVVEELKNYFR 821 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDR 697 PE NR+D I+ F L + ++++ + +L+ +L GV LEVS+ + + ++GYD Sbjct: 822 PELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEPVKELICKQGYDP 881 Query: 698 AMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 A GARP+ R + + ++ PL+ L GS G V LD N Sbjct: 882 AYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDDTGN 924 >UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bigelowiella natans RepID=Q3LW37_BIGNA Length = 897 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 250/654 (38%), Positives = 392/654 (59%), Gaps = 77/654 (11%) Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 E+ ++ F +L + A G DP+IGR+KE++R I+VL R+ KNNP LVG+ GVGKTAIA Sbjct: 236 SEDIIDTFGVDLTEKAEFGEGDPVIGRKKEIDRLIRVLARKSKNNPCLVGDPGVGKTAIA 295 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFI 284 EGLA+RI +VPE + + I +L++ ++AG+KYRGDFE R ++++ + + ILFI Sbjct: 296 EGLAYRIWNDEVPEFLKNKRIINLELTKIVAGSKYRGDFESRILSIIEMARFEDSVILFI 355 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DEIHTI+GAG +S G +DAAN++KP LS G+I +IG+TT +EF + D AL RRFQ + Sbjct: 356 DEIHTIMGAG-SSEGTLDAANMLKPPLSRGEISLIGATTEEEFRKYIKADGALERRFQAV 414 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EP+I E +QI++G+K + +H V Y+ +A+ A V+ + +YI+D+ LPDKAID++DE Sbjct: 415 KVPEPTISEAIQILHGIKKNFGNYHGVVYSDEAIEACVKFSKQYISDKFLPDKAIDLLDE 474 Query: 405 AGARARL----------------MPVSKRKKTVNVADIESVVA----------------- 431 +GA ++ + KK V DI+ + A Sbjct: 475 SGAFVKMKEGYAIKNIEDYTFLIKSYRETKKAVVEKDIQKLKATLITEIKALKKVEQVLQ 534 Query: 432 ----------------RIARIPE-------------KSVSQSDRDTLKNLGDRLKMLVFG 462 R+ ++P+ K VS+S+ + L NL L V G Sbjct: 535 KIKLSQEAIKRDINNIRVVKVPDVETVIEEMTGVKIKEVSKSESENLLNLESILHKSVIG 594 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRF 519 Q++A+ A+++A++ +R GL +P+ SF+FAGPTGVGKTE+ LS+ ++RF Sbjct: 595 QEEAVTAVSKAMRKSRVGLRDPKRPIASFIFAGPTGVGKTELAKTLSRVYFDSEDAMIRF 654 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DMS++ E+H VS+LIG+PPGY+G+ GG LT+AV K PH+++L DE+EKAHPDV+ LLQ Sbjct: 655 DMSDFAEKHNVSKLIGSPPGYIGYSDGGQLTEAVRKTPHSLVLFDELEKAHPDVYLPLLQ 714 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE-------- 631 V+D+G L D+ G+ DF+N ++++T+N G +E E + + + D E+ Sbjct: 715 VLDDGRLADSKGKIVDFKNTIIILTSNLGAKEVEARRKAIKQSSETEDISEKESFSIYNA 774 Query: 632 -IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWL 690 I + F PEF NR+D II F L+ ++++ F+ ++ + + G++++ ++ R + Sbjct: 775 AIAEYFRPEFLNRIDEIIIFKRLTQSQVYEIFAIFMNSVKHRAAKLGITIQETERLRQLV 834 Query: 691 AEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 E GY A GARP+ R I ++ PL+ +L +V G TV LD ++T+ Sbjct: 835 TEAGYTPAFGARPLKRTISRLIESPLSEMILSNEVVSGD--TVLLDYYNKKVTF 886 >UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD Length = 745 Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust. Identities = 281/731 (38%), Positives = 432/731 (59%), Gaps = 52/731 (7%) Query: 14 FARAREHR--HEFMTVEHLLLALL-SNPSAREALEACSVDLVALRQELEAFIEQTTPVLP 70 +AR +R H + EHLLL L+ +A L L LR+ +E I + Sbjct: 14 YAREEGNRLGHAMVGPEHLLLGLMREGGTAATILSEFGASLDGLRRRVEEIIGR------ 67 Query: 71 ASEEER-DTQPTLS--FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKH 127 E R + P+++ +RV++ A +S G + ++L+ I E + A +L Sbjct: 68 -GEGNRLNDAPSITPRARRVMELASAEARSLGAQVTSTEHILLGIIREGDGVAFRIL--Q 124 Query: 128 EVSR-LDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGID 186 E+++ +D + + +++ P + P ++ + +L + AR G +D Sbjct: 125 ELTKDVDTIRWRVLAQGDGSSGKAAKPVATPF----------LDEYGRDLTKQAREGKLD 174 Query: 187 PLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIY 246 P+IGR +E+ R Q+L RR KNNP+L+G+ GVGKTAI EGLA I + P + + Sbjct: 175 PVIGRSEEIRRVTQILTRRTKNNPVLIGDPGVGKTAIVEGLALAIFEKRTPPNLHGVRLV 234 Query: 247 SLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANL 306 SLD+ ++AGTKYRG+FE+R + ++++L ++ + FIDE+HT++GAG A G +DAAN+ Sbjct: 235 SLDLSGVVAGTKYRGEFEERLRQIIEEL-RNAKVMAFIDELHTLVGAGGAEG-TLDAANI 292 Query: 307 IKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYE 366 +KP LS G+I+VIG+TT E+ EKD AL RRFQ + + EPS ET+QI+ GL+P+YE Sbjct: 293 LKPALSRGEIQVIGATTTGEYHRYIEKDAALERRFQPVIVLEPSPAETLQILRGLRPRYE 352 Query: 367 AHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL-----MPVSKRK--- 418 HH V+ A+ AV + + + R+ PDKAID+IDEA +R RL +PVS+ + Sbjct: 353 EHHGVQIPESALELAVRIGERSLPGRNFPDKAIDLIDEAASRVRLNMSVGLPVSETEDGE 412 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V+ DIESV+ + I S L +L ++L+ V+GQ +AI+AL+ A++ AR Sbjct: 413 PMVSREDIESVINSMGGI----YSDESAGQLSDLEEQLQEQVYGQPEAIKALSSALRRAR 468 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIG 535 GLG + SFLF GP+GVGKT + L+K L G E L+R DMSE+ E H++S+LIG Sbjct: 469 VGLGGRTRVSASFLFVGPSGVGKTHLAKALAKTLFGSERSLIRVDMSEFQEAHSISKLIG 528 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 +PPGYVGF+QGG LT+AV + P +V+LLDEIEKAHPDV+N LQV+D+G LTD GR D Sbjct: 529 SPPGYVGFEQGGRLTEAVRRQPFSVILLDEIEKAHPDVYNTFLQVLDDGRLTDGLGRTVD 588 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 FR +++MT+N G + DN+ ++ IFTPEF +RLD++I F L Sbjct: 589 FRRTIIIMTSNTGFNVNPTVGFSPVTPDNNA----PLRNIFTPEFLDRLDDVIRFRPLGE 644 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDR----AMG-ARPMARVIQD 710 D + +V + + E++ +L + +++ WL K R A+G +R + ++++ Sbjct: 645 DELVRVAQQLLGEMREELASRELNVTFDPAIAAWLVSKLKARSPKHAVGSSRQLRTLLRE 704 Query: 711 NLKKPLANELL 721 ++ PLA EL+ Sbjct: 705 EIEDPLALELI 715 >UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding subunit n=25 Tax=Bacteria RepID=CLPC_CHLMU Length = 870 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 256/622 (41%), Positives = 387/622 (62%), Gaps = 72/622 (11%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ + +L ++ + +DP+IGR E+ER I +LCRRRKNNP+L+GE+GVGKTAI EGLA Sbjct: 206 LKAYGYDLTEMFKEARLDPVIGRSAEVERLILILCRRRKNNPVLIGEAGVGKTAIVEGLA 265 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 +IV G+VPE + + +LD+ ++AGTKYRG FE+R KA++ ++ + N +LFIDE+H Sbjct: 266 QKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELH 325 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 TI+GAGAA G +DA++++KP L+ G+I+ IG+TT E+ EKD AL RRFQKI + Sbjct: 326 TIVGAGAAEGA-IDASHILKPALARGEIQCIGATTLDEYRKHIEKDAALERRFQKIVVQP 384 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 PS++ETV+I+ GLK KYE HH+V T +A+ AA +L+ +Y++ R LPDKAID++DEAGAR Sbjct: 385 PSVDETVEILRGLKKKYEEHHNVFITDEALVAAAKLSDQYVHGRFLPDKAIDLLDEAGAR 444 Query: 409 ARLMPVSKRKKTVNV-ADIESVV-----ARIARIPEKSVSQSD-----RDTLKNL----- 452 R+ + + + + + A+IES A + EK+ S D R+ L N+ Sbjct: 445 VRVNTMGQPSELLRLEAEIESTKQAKEQAIGTQEYEKAASLRDEEKKLREKLSNMKQQWE 504 Query: 453 ----------------------------------GDRLKML-------VFGQDKAIEALT 471 ++L ML V GQD+A+ ++ Sbjct: 505 SNKEEHQVPVDEEAVAQVVSVQTGIPAARLTEAESEKLLMLENTLQKKVIGQDQAVASIC 564 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS-KALGIE--LLRFDMSEYMERH 528 AI+ +R G+ ++P+GSFLF GPTGVGKT + Q++ + G E L++ DMSEYME+ Sbjct: 565 RAIRRSRTGIKDPNRPMGSFLFLGPTGVGKTLLAQQIAVEMFGGEDSLIQVDMSEYMEKF 624 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 ++++G+PPGYVG ++GG LT+ V + P+ V+L DEIEKAHPD+ +++LQ+++ G LTD Sbjct: 625 AATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTD 684 Query: 589 NNGRKADFRNVVLVMTTNAG---VRETERKSIGL-IHQD-----NSTDAMEEIKKIFTPE 639 + GRK DFRN +++MT+N G +R+T GL H D DA +KK PE Sbjct: 685 SFGRKIDFRNTIIIMTSNLGADLIRKTGEIGFGLRSHMDYGVIKEKIDAA--VKKHLKPE 742 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAM 699 F NRLD + F L + + +++ I +L +L ++L + ++L +KG+ M Sbjct: 743 FINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNHQMALNIPDSVVSFLVDKGHSPEM 802 Query: 700 GARPMARVIQDNLKKPLANELL 721 GARP+ RV++ L+ PLA LL Sbjct: 803 GARPLRRVVEQYLEDPLAEMLL 824 >UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWX3_9BACL Length = 824 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 260/653 (39%), Positives = 393/653 (60%), Gaps = 73/653 (11%) Query: 159 SEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV 218 SE + + + + +L + A +DP++ R+KE+ R I++L RR KNNP+L+GE GV Sbjct: 169 SENSSSKTKTLNSLAKDLTRDAFNNKLDPVLARDKEITRMIEILNRRTKNNPVLIGEPGV 228 Query: 219 GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT 278 GKTAI EGLA RIV +VP + + LD+G+LLAGTKYRG+FE+R K ++ ++E Sbjct: 229 GKTAIVEGLAERIVSQNVPSNLLGKRVMVLDMGTLLAGTKYRGEFEERLKNIIAEIEDAG 288 Query: 279 NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALA 338 + ILFIDEIHTIIGAG S G DA+N++KP LS G I+ IG+TT +E+ FEKD AL Sbjct: 289 DIILFIDEIHTIIGAG-GSEGSADASNILKPALSRGLIQCIGATTTEEYRKYFEKDAALE 347 Query: 339 RRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKA 398 RRFQ I + EPS E++++I+ GL+ KYE HHDV +A+ +AV+L+ YI DR LPDKA Sbjct: 348 RRFQPIKVEEPSTEDSIKILEGLRHKYEEHHDVEILDEAICSAVKLSTTYITDRCLPDKA 407 Query: 399 IDVIDEAGARAR----------------LMPVSKRKKTVNVADIESVVAR--------IA 434 ID+IDEA ++ + L ++K K + + A+ I+ Sbjct: 408 IDLIDEACSKVKLRYYKSPDKLKEYEDELTRLNKEKDRAVINQEFEIAAKKRDEVNKVIS 467 Query: 435 RIPEKSVSQSD---RDTLKNLGDRL-KMLVFGQDKAIEALTEA----------------- 473 +I E +S D +D +K + + ++L + LTE+ Sbjct: 468 KIEEFKISWQDSLSKDKIKITSEHIAEVLAAWTGVPVTKLTESESERLLKLEEILHKRVI 527 Query: 474 ------IKMARA------GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLR 518 + +A+A G ++P+GSF+F GPTGVGKTE+ LS+AL ++R Sbjct: 528 GQDEAVVSLAKAVRRARSGFKAPNRPIGSFIFLGPTGVGKTELAKSLSEALFSSEDNMIR 587 Query: 519 FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL 578 DMSEYME H++SRL+GAPPGYVG+++ G L++ V + P++V+L DEIEKAHP +FNILL Sbjct: 588 IDMSEYMEPHSISRLVGAPPGYVGYEEVGQLSEQVRQKPYSVVLFDEIEKAHPSIFNILL 647 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE-TERKSIGLIHQDN--------STDAM 629 QV+D+G LTD +GR DF+N +++MT+N GV E ++K +G D+ M Sbjct: 648 QVLDDGRLTDASGRVIDFKNTIIIMTSNVGVSELNDQKFVGFGGSDSIKNDYKNVQNTMM 707 Query: 630 EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNW 689 E +KK + PEF NR+D+II F L + + ++ + I L +L+ + ++++++++A Sbjct: 708 EALKKQYRPEFLNRIDDIIVFKTLEKEELEKISELLIDGLSKRLEDRNITIKLTKKAMAK 767 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 + E G + GARP+ R IQ N++ L+ ELL + G T+ +D +K+ Sbjct: 768 IVEDGSIKEYGARPLKRSIQKNIEDLLSEELLQNPELTG---TINIDYKKDSF 817 >UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=Clostridiales RepID=C7H8Y8_9FIRM Length = 767 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 253/635 (39%), Positives = 374/635 (58%), Gaps = 65/635 (10%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ + NL + AR G +D +IGR++E+ R IQ+L RR+KNNP L+GE+GVGKTAIAEG+A Sbjct: 134 LDTYCENLTRKAREGKLDDIIGRDREIYRTIQILSRRQKNNPCLIGEAGVGKTAIAEGIA 193 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RI +G VP + D I+ LD+ SL+AGT++RG FE+R K LL +++ N ILFIDEIH Sbjct: 194 ERIAKGQVPAGLQDKEIFLLDLTSLVAGTQFRGQFEQRVKGLLSEVKAAGNVILFIDEIH 253 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 TI AG + G ++A N++KP LS G+I+VIG+TT+ E+ EKD+AL RRFQ + + E Sbjct: 254 TITSAGESEGA-MNAGNILKPALSRGEIQVIGATTFNEYRKYIEKDQALERRFQPVRVEE 312 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 PS+ +T+ ++ G+K YE HH V+ A + A V L+ +YI DR+LPDKAID++DEA A Sbjct: 313 PSVADTLAVMGGIKHYYEEHHHVQVPADVLNATVTLSERYITDRYLPDKAIDLLDEACAC 372 Query: 409 ARLM-PVSKRKKTVN--------------------------VADIESVVARIAR------ 435 L PV T+ VA+ ++ +A++ R Sbjct: 373 CNLAHPVISEYLTMQKELEALKQEEADMENADVNEPIDYERVAERKTRMAQLERELPAKQ 432 Query: 436 ----------------------IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 IP + +++ L +L LK + GQD A+ + +A Sbjct: 433 AAAGEIQVTMDDVAKVIELWTGIPAVKIRETEYAKLASLETELKKKIIGQDDAVHLVAQA 492 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL--GIE-LLRFDMSEYMERHTV 530 +K +RA L +P SF+F GPTGVGKTE+ QL+ L G + L+R DMSEYME++ V Sbjct: 493 VKRSRADLSGRRRP-ASFIFVGPTGVGKTELVKQLANQLFDGPDPLIRLDMSEYMEKYAV 551 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 SR+IG+PPGYVG+++ G LT+ V + P++V+L DEIEKAHPDV NILLQ++D G + D Sbjct: 552 SRMIGSPPGYVGYEEAGQLTEKVRRRPYSVVLFDEIEKAHPDVMNILLQILDEGKINDAQ 611 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIK---KIFTPEFRNRLDNI 647 GR DF N V+ MT+NAG + S+G + + + K + PEF R+D + Sbjct: 612 GRTVDFSNTVICMTSNAGSSDQTTASLGFNRSEEERNEEKSRKALSQFLRPEFLGRVDEV 671 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 I F LS + + + + E + ++ KG++ + A L K GAR + R Sbjct: 672 ITFKPLSEETLQGIAALMLDEYKPSMEAKGIAYSYTPAALAALVHKSQGGKFGARDLRRT 731 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 I+ ++ P A +++ G+LV G +TV D E +E+ Sbjct: 732 IRKAVEDPAAEKIIDGTLVSGSTLTV--DAENDEI 764 >UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=1 Tax=Ectocarpus siliculosus RepID=D1J7B8_ECTSI Length = 903 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 253/616 (41%), Positives = 371/616 (60%), Gaps = 80/616 (12%) Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 +TT+L + A IDP++GRE E+ER IQ++ RRRKNNP+L+GE GVGKTA+AEGLA RI Sbjct: 192 YTTDLTESAERAKIDPVVGRENEIERVIQIISRRRKNNPILIGEPGVGKTAVAEGLAQRI 251 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 VQ +VP + D I+ LDI LLAGTKYRG+FE+R K ++++L++ N I+ IDE+HT++ Sbjct: 252 VQREVPSELHDYKIFVLDITLLLAGTKYRGEFEERLKRIVQELKEQKNIIIVIDEVHTLV 311 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 GAGAA G +DAAN++KP L+ G+++ IG+TT E+ EKD AL RRFQ + + EPSI Sbjct: 312 GAGAAEGA-LDAANILKPALARGELQCIGATTIDEYRQHIEKDPALERRFQPVWVNEPSI 370 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI--------- 402 EET+ I+ GL+ +YE HH + T +A+ AA L +YI DR LPDKAID+I Sbjct: 371 EETIAILKGLRLRYEQHHRLEITNEALVAAANLGAQYIADRFLPDKAIDLIDEGSARVRL 430 Query: 403 ----------------------------------------DEAGARARLMPVSKRKKT-- 420 DE R+++ + K T Sbjct: 431 VNYRLPPAVQILDKELRRILEDKDLAVREQRFETATEIRDDELSLRSQMGAIIKASNTPI 490 Query: 421 ---------VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 V DI S+VA +P +++ + L L + L V GQ +A+ A+ Sbjct: 491 PKGVLERLKVGSQDIASIVALWTGVPVTKITKDENTRLLELENVLHQRVIGQKEAVSAVA 550 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL-SKALGIE--LLRFDMSEYMERH 528 A++ AR G+ + +P+ SF F+GPTGVGKTE+T L S G E ++R DMSE+MERH Sbjct: 551 RAVRRARVGMRNMKRPIASFFFSGPTGVGKTELTKTLASFFFGAEDAMVRLDMSEFMERH 610 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 TV++LIG+PPGY+G+++GG LT+AV + P+ V+L DE+EKAHPDVFN+LLQ++++G LTD Sbjct: 611 TVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKAHPDVFNLLLQILEDGRLTD 670 Query: 589 NNGRKADFRNVVLVMTTNAG---VRETERKSIGLIHQDNSTDAM------------EEIK 633 + GR DF+N +L+MT+N G +++ + S G+ D E +K Sbjct: 671 SKGRIIDFKNTILIMTSNLGSKAIQDNDLSSQGMGFGGEKADTQKTKYAQLCNTVGESLK 730 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAE 692 F PEF NR+D II F+ L+ I ++ + +L ++ +K ++L ++ L E Sbjct: 731 AFFKPEFLNRIDEIIVFEQLTKTNITEIAVIMVNDLIERVKKEKDITLSLTPRMMELLVE 790 Query: 693 KGYDRAMGARPMARVI 708 +G++ GARP+ R + Sbjct: 791 EGFNPTYGARPLRRAL 806 >UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37703 Length = 792 Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust. Identities = 257/657 (39%), Positives = 385/657 (58%), Gaps = 74/657 (11%) Query: 147 PTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRR 206 P+ SD + E+ + + ++ TNL+Q A G +D +IGR+KE+ R IQ+L RR Sbjct: 131 PSGKSDKKGSSSRREKKKELKFLGSYCTNLSQKAADGQLDNIIGRDKEIARVIQILSRRT 190 Query: 207 KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKR 266 KNNP L+GE GVGKTAIAEG+A RI GDVP +AD +Y LD+ +L+AGT++RG FE R Sbjct: 191 KNNPCLIGEPGVGKTAIAEGIAQRINSGDVPFNLADKKLYLLDLTALVAGTQFRGQFESR 250 Query: 267 FKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 K L+ +++++ N ILFIDE+H ++GAG S G ++AAN++KP LS G+++VIG+TT+ E Sbjct: 251 VKGLVDEVKREGNIILFIDEVHNLVGAG-DSEGSMNAANILKPALSRGEVQVIGATTFGE 309 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + EKD AL RRFQ + + EP+IE+TV ++ G+K YE +H + + VR L+ Sbjct: 310 YRKYIEKDSALERRFQPVTVNEPNIEDTVSVLLGIKKYYEEYHHLHISDYLVRVCAVLSE 369 Query: 387 KYINDRHLPDKAIDVIDEAGARA-----RLMPVSKRKKTVNV------------------ 423 +YI DR LPDKAID++DEA A + K KK ++V Sbjct: 370 RYITDRFLPDKAIDLMDEACAYTCIRSPEIAEYEKIKKEISVLEGMEKSISEQDEIDYQA 429 Query: 424 -----------------------------ADIESVVARIARIPEKSVSQSDRDTLKNLGD 454 DI VV IP +++++ + L Sbjct: 430 LAEVKGKLIHAREDEAKLRDKAESVEVTEGDIAKVVELWTGIPASKIAENEFLKIAKLEG 489 Query: 455 RLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI 514 LK V GQD+A+E LT+AIK R L +P SF+F GPTGVGKTE L KAL Sbjct: 490 ALKSRVLGQDEAVEVLTKAIKRTRVQLSKRRRPA-SFIFVGPTGVGKTE----LVKALAE 544 Query: 515 E-------LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIE 567 E L+R DM+EYME+H+V+R+IG+PPGYVG+D+ G LT+ V + P++V+L DEIE Sbjct: 545 EMFDSPEPLIRLDMTEYMEKHSVARMIGSPPGYVGYDEAGQLTEKVRRRPYSVILFDEIE 604 Query: 568 KAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD 627 KAHPDV NIL+Q++D G + D +GR +F N ++ MT+NAG + KS+G+ + + Sbjct: 605 KAHPDVMNILMQILDEGKVDDAHGRTVNFENTIICMTSNAG---STDKSVGVGFNRTADE 661 Query: 628 -----AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV 682 AM+ +++ PEF +R+D I+ F L+ + + + E++ L +K + L Sbjct: 662 VSKDKAMKGLREFLRPEFISRIDEIVVFRQLTKENFADIAALMLDEMKEPLAEKNIGLTY 721 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 + EA +AEK + + GAR + RVI+ ++ +A E++ + D + V+ + E+ Sbjct: 722 TPEALKLIAEKSFGKPYGARDIRRVIRQEVEDKVA-EIIIENASDTETIAVSANGEQ 777 >UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae RepID=Q6ETV8_ORYSJ Length = 822 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 249/590 (42%), Positives = 363/590 (61%), Gaps = 33/590 (5%) Query: 186 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTI 245 DP+IGR+ E++R + +LCRR KN+ +LVG GVGKTAIAEGLA R+ GDVP +A + Sbjct: 196 DPVIGRDDEVDRVVCILCRRTKNSAVLVGAPGVGKTAIAEGLARRVAAGDVPAALAGARV 255 Query: 246 YSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGGQVDAA 304 LD+GSL+AGT+YRG FE+R K ++++ E ILFIDE+H ++GAGA GG +D A Sbjct: 256 VELDVGSLVAGTQYRGMFEERVKKVIQEAEGAAGKVILFIDEMHMLLGAGACKGGSMDGA 315 Query: 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPK 364 NL+KP L+ G+IR +G+TT+ E+ E+D A RRFQK+ + EP+ + T+ I+ GLK + Sbjct: 316 NLLKPALARGRIRCVGATTFDEYRKHIERDAAFERRFQKVIVEEPTTQATIAILQGLKQR 375 Query: 365 YEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA 424 YE HH ++ A+ AA +LA +YI R PDKAID+IDEA + RL S +K VN Sbjct: 376 YEEHHGLKIQDAAIVAAAQLADRYITGRQFPDKAIDLIDEACSTVRLKIDS--QKGVNTT 433 Query: 425 DIES----------------------VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG 462 +++ VV+R IP ++ Q +++ L +L DRL V G Sbjct: 434 GMQNNNGNTSVNGVNEAIVGPDHVAQVVSRWTGIPVTTLDQEEKEKLIHLADRLHERVVG 493 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRF 519 QD+A++ + +A+ +RAGL +P+GSFLF G TGVGKTE+ L++ L L+RF Sbjct: 494 QDEAVKLVAQAVLRSRAGLEQPGQPIGSFLFLGSTGVGKTELAKALAEQLFDSEKMLIRF 553 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DMSE++ +V RLIGAPP Y G GG LT+ V P++V+L DE+EKA P VFN+ LQ Sbjct: 554 DMSEFVGSGSVLRLIGAPPSYHGHQDGGQLTEKVRTRPYSVILFDEVEKADPSVFNVFLQ 613 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD-AMEEIKKIFTP 638 ++D+G LTD GR DF+N +++MT+N G G + + D M++++K F P Sbjct: 614 LLDDGMLTDGKGRTVDFKNTIIIMTSNLGAEHLTEGVTGERTMEAARDLVMKQVQKYFRP 673 Query: 639 EFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRA 698 E NRL I+ F+ LS D + +VV + + + KGVSL S +A + + + Y+ Sbjct: 674 ELLNRLSEIVIFEPLSHDNLKEVVKIQMKSVVTSVAHKGVSLLASDDALDVILSESYNPM 733 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQ-VTVALDKEKNELTYGFQ 747 GARP+ R +Q N+ L+ L+ G D GQ T+++D ++ FQ Sbjct: 734 YGARPVRRWVQKNVMTKLSEMLITG---DAGQGSTISIDATDDKKGLNFQ 780 >UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma subunit n=1 Tax=Thalassiosira pseudonana RepID=B8BXC6_THAPS Length = 890 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 256/612 (41%), Positives = 375/612 (61%), Gaps = 37/612 (6%) Query: 154 GSQPNSEEQAGGE---ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNP 210 G P GGE + +L LA +DP+ GR++E+ A++ L RRRKNNP Sbjct: 223 GEGPQLVSGNGGELSTPTLSEVGVDLTDLAARMELDPVHGRDEEVRAALRTLVRRRKNNP 282 Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 L+GE GVGKTAIAEG+A + P ++ + I SL++ +L+AGTKYRG+FE+R +A+ Sbjct: 283 CLMGEPGVGKTAIAEGVAQILA---APNMLRNHRIISLELANLVAGTKYRGEFEERLQAI 339 Query: 271 LKQL--EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFS 328 ++++ E+ +ILFIDEIHT++GAG+A GG +DAAN++KP L+ GK++VIG+TT E+ Sbjct: 340 VEEVTDERAPPTILFIDEIHTLVGAGSAEGG-IDAANMLKPALARGKLQVIGATTISEYR 398 Query: 329 NIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY 388 EKD AL RR Q + + EP+I++TVQI+ + +Y AHH VRYT +++ AA +L+ +Y Sbjct: 399 KYIEKDAALERRLQPLMVKEPTIDQTVQILEAIAEQYGAHHGVRYTPESLVAAAKLSERY 458 Query: 389 INDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA-----DIESVVARIARIPEKSVSQ 443 + DR LPDKAID++DEAGA + + N DI S++++ IP ++ Sbjct: 459 VTDRFLPDKAIDLLDEAGASVHIEHAFNPSGSTNTPEVTDQDISSIISQWTNIPIGKLTS 518 Query: 444 SDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTE 503 ++ TL L L V GQ++AI+++ A++ AR+GL +PV SFLF G TGVGKT Sbjct: 519 TESSTLLTLESSLASRVKGQERAIKSIARAVRRARSGLRDAGRPVASFLFCGSTGVGKTW 578 Query: 504 VTVQLS-KALGIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAV 560 + L+ + G E ++R DMSEYME+HT SRL G PPGYVG+++GG LT+AV + PH+V Sbjct: 579 LAKSLAAQYYGSEKDMVRIDMSEYMEKHTASRLTGPPPGYVGYEEGGQLTEAVRRAPHSV 638 Query: 561 LLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG---VRETERKSI 617 +LLDEIEKAH DV N+LLQVM++G LTD GR F+NV+LVMT+N G + E Sbjct: 639 VLLDEIEKAHRDVLNVLLQVMEDGVLTDGKGRTICFKNVILVMTSNVGSAKIMELVNGDA 698 Query: 618 GLIHQDNST-DA-----------MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKF 665 G D ++ DA EE+ K PE NR+D II F L + + + K Sbjct: 699 GEFDSDTTSLDAAEDYAALSEVVQEELTKEMKPELLNRIDEIIVFSPLGDENLRDIA-KA 757 Query: 666 IVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRA--MGARPMARVIQDNLKKPLANELL 721 IV+ ++ ++ ++L S + + G A GARPM R Q + +++ ++ Sbjct: 758 IVDASIERAFKERSITLSASDSLIDAVVMDGSMNAAEFGARPMRRAAQRLFEDAVSDAIV 817 Query: 722 FGSLVDGGQVTV 733 G L + TV Sbjct: 818 RGFLQEDDHATV 829 >UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus RepID=A8YTL4_LACH4 Length = 707 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 251/626 (40%), Positives = 386/626 (61%), Gaps = 61/626 (9%) Query: 150 SSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNN 209 SS+ S P + +Q + + +L + A+ DP+IGR+++++ I++L RR+KNN Sbjct: 41 SSNMSSAPQTIQQNPQQPNEKPIGVDLVEEAKKNNFDPVIGRDEQIDNVIEILSRRKKNN 100 Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKA 269 P+L+G +GVGKT+I EGLA RI G+VP MA+ I S++I ++AG+ RG FE+R K Sbjct: 101 PVLIGPAGVGKTSIVEGLAERIASGNVPAKMANMHIISVNINDMVAGSSLRGSFEERLKK 160 Query: 270 LLKQLEQDTNSILFIDEIHTIIGAGA--ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEF 327 ++ + + D N +LFIDE+H I+GAG+ + DAAN++KP L++G +++IG+TT EF Sbjct: 161 VIDKAKSDPNIVLFIDELHNIVGAGSTDSENNNGDAANILKPALANGDLKLIGATTTSEF 220 Query: 328 SNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK 387 I EKD AL+RRFQ + + EP+ + ++I+ GLK KYE +H V+Y+ +++ AVEL+ + Sbjct: 221 QRI-EKDPALSRRFQAVQVPEPTTDVAIKILKGLKKKYEDYHHVKYSDDSLKLAVELSER 279 Query: 388 YINDRHLPDKAIDVIDEAGARARLM--PVSKR---------------------------- 417 YI R+LPDKAID++DEAGA+ L+ P ++ Sbjct: 280 YIQGRYLPDKAIDLMDEAGAKKALLVQPTDEKNLKNQISALEAKKSEAAKAEDYDKAGEI 339 Query: 418 --------KKTVNV----------ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 K+ NV DI +++ + +IP + + +L +LK Sbjct: 340 KTKIAELEKQLKNVDTKNIPEVTEKDIYAIIEQKTKIPMSELHADEAQKNLDLAKKLKKN 399 Query: 460 VFGQDKAIEALTEAIKMARAGLGHEH-KPVGSFLFAGPTGVGKTEVTVQLSKAL---GIE 515 V QD+AI+ +T+AI AR + + +P GSFL GPTGVGKTE+ QL+ L Sbjct: 400 VIDQDRAIDVITDAI--ARKQIFKDSDRPTGSFLLTGPTGVGKTELAKQLAIQLFGNKDH 457 Query: 516 LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFN 575 L+R DMSEY + V++LIG+ PGYVG+ +GG LT+ V P++++L DEIEKA+P VFN Sbjct: 458 LIRLDMSEYQDEMAVNKLIGSAPGYVGYGEGGQLTEKVRHQPYSLILFDEIEKANPQVFN 517 Query: 576 ILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKI 635 LLQ+MD+G LTD GR F++ +L+MT+NAG + + G + QD A+E Sbjct: 518 ALLQIMDDGRLTDAQGRTVSFKDTILIMTSNAGFSDKLLED-GKVDQDKLISALE---NY 573 Query: 636 FTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGY 695 F PEF NRLD I+ F+ L+ + ++++ ++ ++ L +KGV++EVS EA+N+LAEKGY Sbjct: 574 FRPEFLNRLDAIVPFNSLTEQDMGKIINIYLKKMSHVLAKKGVTVEVSDEAKNFLAEKGY 633 Query: 696 DRAMGARPMARVIQDNLKKPLANELL 721 D+ GARP+ RV++ NL+ P A +L Sbjct: 634 DKKFGARPLRRVVEQNLETPAAKLIL 659 >UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma subunit (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRH2_THAPS Length = 782 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 258/616 (41%), Positives = 376/616 (61%), Gaps = 33/616 (5%) Query: 155 SQPNSEEQAGGEERMENFT-----TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNN 209 S P + GG E M T +L ++AR G +D + GRE E+ ++ L RRRK+N Sbjct: 158 SSPVTLIVVGGNEGMSTPTLDKVGIDLTEMAREGRLDAVYGRENEIRMCLRTLGRRRKSN 217 Query: 210 PLLVGESGVGKTAIAEGLAWRIVQG-----DVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 P L+GE+GVGKTAIAEG+A + + P + + S+D+ SL+AG K+RGDFE Sbjct: 218 PCLIGEAGVGKTAIAEGVAQCLAESLPPLPPCPRALQGFRVVSVDMASLVAGMKFRGDFE 277 Query: 265 KRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ-VDAANLIKPLLSSGKIRVIGSTT 323 +R + L+K+ T +ILFIDE+HT+IGAG G + AANL+KP L+ G+IRVIG+TT Sbjct: 278 ERIQNLIKE-ASSTPTILFIDELHTLIGAGGGGGDGGMSAANLMKPALARGEIRVIGATT 336 Query: 324 YQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVE 383 E+ EKD AL RRFQ I + EP+++E ++I+ + P+YE H VRYT A+ AAV Sbjct: 337 ISEYRQYIEKDGALERRFQPILVNEPTVDEAIEILTAVTPRYEEFHGVRYTPFAIDAAVR 396 Query: 384 LAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK------TVNVADIESVVARIARIP 437 LA +YINDR LPDKAID++DEAG+ +L + V ++ +VV+ I+ IP Sbjct: 397 LAERYINDRFLPDKAIDLLDEAGSMVKLADDGEEDDLPDDFFVVTDDNVATVVSEISGIP 456 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 + + ++ L L + V GQD A+ ++ AI+ AR+GL + KPV +FLF GPT Sbjct: 457 VGKLDRDEKAKLMRLEADIAKRVKGQDPAVNSVARAIRRARSGLRDQTKPVATFLFCGPT 516 Query: 498 GVGKTEVTVQLSKA-LGIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 GVGKTE+ L++ G E ++R DMSEYMER +VSRL+GAPPGYVG+D+GG LT+A+ Sbjct: 517 GVGKTELCKALAQTYYGREKDIIRIDMSEYMERFSVSRLVGAPPGYVGYDEGGQLTEAIR 576 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 + PH+V+L DE+EKAH DV N+LLQ++D G+LTD GR F+N + VMT+N G +E + Sbjct: 577 RKPHSVVLFDELEKAHEDVLNVLLQILDEGSLTDGKGRTVSFKNCIFVMTSNIGSQEILK 636 Query: 615 KSIG--LIHQDNSTDAM-------EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKF 665 S G + S+ M E++K PEF NR+D I+ F L DV+ + Sbjct: 637 LSRGENPTAEAGSSAGMTMEGAVKNELEKKMKPEFLNRIDEIVVFKPLEDDVLISIAMNI 696 Query: 666 IVE-LQVQLDQKGVSLEVSQEARNWLAEKGYDRA--MGARPMARVIQDNLKKPLANELLF 722 + E ++ ++ +++ +Q +A +G A GARPM R + L+ L+ ++ Sbjct: 697 LDETMKRAASEQDMAVTCTQSLMATVANEGAFSAAQFGARPMRRAAKRFLEDTLSEAIMR 756 Query: 723 GSLVDGGQVTVALDKE 738 L +G +V V + E Sbjct: 757 EFLSEGDEVIVDMANE 772 >UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GCV2_PHATR Length = 683 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 268/682 (39%), Positives = 403/682 (59%), Gaps = 39/682 (5%) Query: 84 FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKH----EVSRLDVVNFIS 139 +R L +A G V +V +A+ E A L++ + V+ LDV + Sbjct: 6 LKRTLVQAGKLADQMGSTTVGSQHVFLALLEYSEGGWAVLVKMNVLDDTVTALDVCESLL 65 Query: 140 HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFT---TNLNQLARVGGIDPLIGREKELE 196 D+P Q+ + AGG +M T +L Q A G +DP+ GR+ E Sbjct: 66 QNM-ADQPDQA-----RRELVTGAGGSGKMPTLTECGVDLTQQAEDGLLDPVYGRDDETR 119 Query: 197 RAIQVLCRRRKNNPLLVGES-GVGKTAIAEGLAWRIVQGDV-PEVMADCTIYSLDIGSLL 254 ++ L RRRKNN L+GE GVGKTAIAEG+A +V + P + ++SL++ +L+ Sbjct: 120 ACVRTLIRRRKNNVCLIGEPVGVGKTAIAEGVAQILVDEKLCPARLKGHRLFSLELSNLV 179 Query: 255 AGTKYRGDFEKRFKALLKQLE--QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS 312 AGTKYRG+FE+R ++++K++ + +ILFIDEIH ++GAGAA GG +DAANL+KP L+ Sbjct: 180 AGTKYRGEFEERLQSIIKEVTDPKAPPTILFIDEIHNLVGAGAAEGG-MDAANLLKPALA 238 Query: 313 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVR 372 G++++IG+TT E+ EKD AL RR Q + + EPS+ +T+ I+ ++ YE HH V Sbjct: 239 RGELQLIGATTIMEYRKYIEKDAALERRLQPVMVKEPSVVQTIDILQAVQSNYEKHHGVT 298 Query: 373 YTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM-PVSKRKKTVNVADIESVVA 431 YT+ A+ AA L+ +Y+ DR LPDKA+D++DEAGA A L P V + V++ Sbjct: 299 YTSAALNAAATLSDRYMTDRFLPDKALDLLDEAGAIAHLEEPDEDVTPEVTEHTVAMVIS 358 Query: 432 RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 + IP + + D L+ L + V GQ +AI + A++ AR+GL +PV SF Sbjct: 359 EWSGIPMGKLETQEMDRLQALEGEMGRRVKGQGRAIRGVARAVRRARSGLRDPRRPVASF 418 Query: 492 LFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 LF GPTG GKTE+ L++ G E ++R DMSEYME+H+VSRL G PPGY+G+++GG Sbjct: 419 LFCGPTGTGKTELCKTLAETYYGSEKDMIRIDMSEYMEKHSVSRLTGPPPGYIGYEEGGQ 478 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT+AV + PH+V+LLDE+EKAH DV NILLQVM++G LTD GR +F+N +LVMT+N G Sbjct: 479 LTEAVRRAPHSVVLLDELEKAHGDVLNILLQVMEDGMLTDGKGRTINFKNSILVMTSNVG 538 Query: 609 VR------ETERKSIGLIHQDNSTDA------MEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 R + R SI + +D+ A EE+++ PE NR+D II F LST Sbjct: 539 SRRILEVARSGRDSI--VQKDHYLYAELAQVVKEELEREMKPELLNRIDEIIVFSPLSTG 596 Query: 657 VIHQVVDKFIVEL-QVQLDQKGVSLEVSQEARNWLAEKGYDRA--MGARPMARVIQDNLK 713 + + + + ++ + L ++ + L++ + + +G A GARPM R Q ++ Sbjct: 597 DLWMIAELIVAKISERALKEQKLELKIDRSVIERVMAEGSANADQFGARPMRRAAQRFVE 656 Query: 714 KPLANELLFGSLVDGGQVTVAL 735 L++ ++ G L +G TV+L Sbjct: 657 DSLSDAIIQGFLQEGEGATVSL 678 >UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit ClpA n=5 Tax=Proteobacteria RepID=A5WFU1_PSYWF Length = 854 Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust. Identities = 223/414 (53%), Positives = 305/414 (73%), Gaps = 6/414 (1%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 ML++ LE+SL +A AR+ HE++TVEHLLLALL N +A L++C D+ +LR +LEA Sbjct: 1 MLSRHLEVSLRLAMTLARQKSHEYLTVEHLLLALLENNNAVTTLKSCGADISSLRSDLEA 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE-VTGANVLVAIFSEQESQ 119 +I++ TP L A + E+ Q T F R+LQRA+FHVQS G V G+++LV++FSE ++ Sbjct: 61 YIDKHTPKLDA-DLEQTPQATQGFDRILQRAIFHVQSIGSGRLVQGSDILVSMFSEHDTY 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQ--SSDPGSQPNSEEQAGGEERMENFTTNLN 177 A YLL+K VSRL++ ++SHG DE + S + G+ P + ++ + F NLN Sbjct: 120 AVYLLKKQGVSRLELTQYLSHGNEGDETREGPSDNEGADPKAAR--AKKDPLTEFAVNLN 177 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 + A G DPLIGR E+ER QVLCRRRKNNPLLVG+ GVGKT+IAEGLAW I+ P Sbjct: 178 KRAAEGKTDPLIGRSSEIERTAQVLCRRRKNNPLLVGDPGVGKTSIAEGLAWLIINNKAP 237 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + + C IYSLDIGSL+AGTKYRGDFEKR KALL +L++ N+ILFIDE+H IIGAG++ Sbjct: 238 KPLQGCVIYSLDIGSLIAGTKYRGDFEKRMKALLDELKKKPNAILFIDEVHMIIGAGSSM 297 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 +D +NLIKP L++G++R IGSTT+ E+ +FEKD AL+RRFQKID+ EPS++++++I Sbjct: 298 SSNMDVSNLIKPALANGELRCIGSTTFTEYRQVFEKDHALSRRFQKIDVNEPSVDDSIEI 357 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 + GLK +YE H+V+YT A+ +AV+L+ K+I++R LPDKAIDVIDEAGA RL Sbjct: 358 LRGLKSRYEEFHNVKYTDAALVSAVQLSAKHIHERFLPDKAIDVIDEAGAYKRL 411 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 200/318 (62%), Positives = 250/318 (78%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 ++V DIE++++++ARIP KSVS D+ L++L L LVFGQD+AI+ L++AIK++RAG Sbjct: 500 IDVEDIEAIISKLARIPPKSVSNDDKSLLQHLERDLNRLVFGQDEAIKTLSDAIKLSRAG 559 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 L KP+GSF+FAGPTGVGKTEV+ QL+ +GIEL+RFDMSEYME HT SRLIGAPPGY Sbjct: 560 LKSADKPIGSFMFAGPTGVGKTEVSKQLANLMGIELIRFDMSEYMEAHTASRLIGAPPGY 619 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VGFDQGGLLT+ + +HPH VLLLDEIEKAHPDVFN+LLQVMD+G+LTDNNGR A F+ V+ Sbjct: 620 VGFDQGGLLTEKINQHPHCVLLLDEIEKAHPDVFNLLLQVMDHGSLTDNNGRVASFKQVI 679 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L+MTTN G R S+G QD+S D E + ++FTPEFRNRLD II F+ L ++ Sbjct: 680 LIMTTNVGAENISRSSMGFTKQDHSKDNTEAMNRVFTPEFRNRLDAIIQFNPLDPSIVVS 739 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 VVDKF+VELQ QLD K V LE+ E R +LAEKGYDR MGARPM R+IQ+ +KKPLAN + Sbjct: 740 VVDKFLVELQAQLDDKQVMLEIDDEVREYLAEKGYDRLMGARPMQRLIQNEIKKPLANMV 799 Query: 721 LFGSLVDGGQVTVALDKE 738 LFG L +GG V V L ++ Sbjct: 800 LFGDLAEGGAVHVTLSED 817 >UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain, putative n=2 Tax=Theileria RepID=Q4U8P5_THEAN Length = 916 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 237/629 (37%), Positives = 373/629 (59%), Gaps = 63/629 (10%) Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 FT +L + AR G + +I R+ E+ERAI L R K+NPLLVGE GVGKTAI EG+A +I Sbjct: 255 FTVDLTEKARNGQLPKVIHRDNEIERAIITLSRMTKSNPLLVGEPGVGKTAIVEGIANKI 314 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 QG ++ I L G L+AGTK+RG FE+R L+ +++ + IL IDE H +I Sbjct: 315 SQGISQPQISKKRILQLQFGLLIAGTKFRGQFEERLTKLIDEIKSSGDIILVIDEAHMLI 374 Query: 292 GA---------GAASG-GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 G GA +G G +DAANL+KP LS G+I+ I TT +E+ FEKD AL+RRF Sbjct: 375 GMKFIYNNNKLGAGAGDGSIDAANLLKPPLSRGEIQCIAITTPKEYKKYFEKDMALSRRF 434 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 I + EPS E+T++I+NG+ Y H V YT ++++ A++ + +YINDR LPDKAID+ Sbjct: 435 HPIYVDEPSEEDTLKILNGISSSYGEFHGVEYTQESIKLALKYSKQYINDRFLPDKAIDI 494 Query: 402 IDEAGARARLMPVSKRKKTVNVA------------------DIESVVARIAR-------- 435 +DE+G+ A++ ++ K+ N ++E VV + + Sbjct: 495 MDESGSFAKIQYQNELKREKNELTSATETEGNGETESNPENEVEQVVEKKEQNVLGQVKP 554 Query: 436 ------------IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 IP K +++ + + ++N+ + L +V GQ++A++ + +AI+ A+ + + Sbjct: 555 EHVAEVMSIWTGIPLKKLTRGEMEIIRNMEEDLHKMVIGQEEAVKNVCKAIRRAKTNIKN 614 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE--LLRFDMSEYMERHTVSRLIGAPPGYV 541 ++P+GSFLF GP GVGK+EV L+K L + L+R DMSEY E H++SR++G+PPGY Sbjct: 615 PNRPIGSFLFCGPPGVGKSEVARALTKYLFAKENLIRIDMSEYTEPHSISRILGSPPGYK 674 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G D GG LT+ V +P++V++ DEIEKAH DV NILLQ++++G LTD+ + F+N ++ Sbjct: 675 GHDTGGQLTEKVKSNPYSVVMFDEIEKAHHDVLNILLQILEDGKLTDSKNQTISFKNTII 734 Query: 602 VMTTNAGVRETERKSIGL------IHQDNSTD-------AMEEIKKIFTPEFRNRLDNII 648 +MT+N G +R S G+ + D S+D MEE+K F PE NR+D++I Sbjct: 735 IMTSNTGSNVIQRSSKGVHTFGFTVDSDESSDYLKIKALVMEELKSHFLPELINRIDDVI 794 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F LS + ++ + +L + + G+ +E+S++ +++ + D GARP+ R+I Sbjct: 795 LFKPLSESELKEIAKLMLNDLTARANSAGILIEISEKFADYILKLPRDDKSGARPLRRLI 854 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDK 737 L+ LA+ ++ TV +D+ Sbjct: 855 TSVLEDKLADLVISDDFDSNNTYTVTVDE 883 >UniRef50_A5UYN2 ATPase AAA-2 domain protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UYN2_ROSS1 Length = 786 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/587 (39%), Positives = 354/587 (60%), Gaps = 17/587 (2%) Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 E R+ + +L LAR G + P+IGR +E+++ ++L +R KNNPLL+G+ GVGKTAIAE Sbjct: 176 EHRLAKYGRDLTALARAGRLGPVIGRAEEIKQIARILVQRSKNNPLLLGDPGVGKTAIAE 235 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFID 285 GLA + + D + + +LL+G YRG FE+R + +++ QD N +LF+D Sbjct: 236 GLASYAASENAVTPLRDFYFVEISVAALLSGAMYRGQFEERVQEVIETARQDKNLVLFLD 295 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 EIHT++G+GA +DAAN++KP L+ G IR IG+TT E+ E D ALARRFQ + Sbjct: 296 EIHTLMGSGAGGSSTLDAANMLKPALARGDIRCIGATTIDEYRKHIEPDGALARRFQIVW 355 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 I EPS ET+ I+ GL+ K + HH + +A++ AV L+ +YI D + PDKAI V+DEA Sbjct: 356 IDEPSPTETLHILRGLRSKMQEHHQIEIPDEALQKAVSLSGRYITDGYQPDKAITVLDEA 415 Query: 406 GARARLMPV-----SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 AR RL+ + + + V DI VVAR +IP + + QSD + L +L + L V Sbjct: 416 CARRRLLTIHVQSSPTQTSHLEVEDIGQVVARRTQIPLEVILQSDEERLLHLEEELGKRV 475 Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LL 517 GQD+A+ + EA++++R GL KP+ +FAGPTG GKTE+ LS+ L + L+ Sbjct: 476 LGQDEAVRTVAEAVRISRVGLRAPGKPI-VLMFAGPTGTGKTELAKALSETLFFDPNRLI 534 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 DMSEY E H+V++LIG+PPGY+GF + L + HP++V+LLDEIEKAHP V + Sbjct: 535 TLDMSEYQESHSVAKLIGSPPGYIGFGEEPYLVRELRLHPYSVVLLDEIEKAHPSVLTVF 594 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL--IHQDNSTDAMEE--IK 633 LQV D G LTD GR+ + + ++T+N G ++ IG + + A+ E +K Sbjct: 595 LQVFDEGRLTDARGRRINCGEAIFILTSNLGASIEVKRPIGFQGMEAEQHIAALVEANVK 654 Query: 634 KI----FTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNW 689 +I +PE NRL ++ F L + ++D ++ L QL ++ +S+ + A+ + Sbjct: 655 QIIAARLSPELVNRLQAVVVFRSLDEKTLDAILDLYVQGLNRQLAERQISIAMDASAKAF 714 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 L E+GY GAR + R + + +PL+ E+L G L G Q+ ++ Sbjct: 715 LIEQGYSAEFGARHLKRAFERLIAEPLSREILSGKLKAGQQIIFFME 761 >UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372BC Length = 750 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 266/738 (36%), Positives = 410/738 (55%), Gaps = 36/738 (4%) Query: 13 AFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEAFIEQTTPVLP 70 A A A + H F+ EHLLL++ N +A + L + L+ + I + TP Sbjct: 17 AVAIASQMGHTFVGSEHLLLSIAKEGNSAAADILIDNGLTYDDLQSAVVRMIGKGTPSTL 76 Query: 71 ASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLR----- 125 +S T S +R+L+ A R + T N+L A+ ++ A L+ Sbjct: 77 SSR-----YFTASVKRILENAASGGTIPKRRQATPENILSAVINDTSCTARKLIVSAGGD 131 Query: 126 -KHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGG 184 + LDV NF DE S P Q R T+ N A+ Sbjct: 132 IRGICESLDV-NF---RLDDDELYSSCAP-----KRSQFPHLFRYGRHITDSNVQAKR-- 180 Query: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCT 244 DPLIGRE E+++ + L RR K+NP L+GE+GVGKTAI +G+A + GDVPE + + Sbjct: 181 -DPLIGREAEVQQVLMTLSRRTKSNPCLIGEAGVGKTAIVDGVAGLFISGDVPEALRNKY 239 Query: 245 IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA 304 I++LD+ +L++G KYRGDFE+R + +++ N ILFIDEIHTI+GAGAA G +DAA Sbjct: 240 IFALDLTALISGAKYRGDFEERLRGCIEEASSSGNIILFIDEIHTIVGAGAAEGA-IDAA 298 Query: 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPK 364 N++KP L+ +++VIG+TT+ E+ EKD+AL RRFQ + + EPS+ E V++I G++ Sbjct: 299 NIMKPQLARSELQVIGATTFDEYRKTIEKDKALERRFQPVTVNEPSVGECVEMIKGIRTA 358 Query: 365 YEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK-RKKTVNV 423 YE +H+V + +A +V + ++INDR LPDKAID +DEA A A + RK ++ Sbjct: 359 YEKYHNVIISDEAAEFSVRTSARFINDRFLPDKAIDTLDEACAAAAIRNRENCRKYEISC 418 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 DI V++ IPE S++ + L + G I + EA+ + +GL Sbjct: 419 GDIAHVISLKTGIPESSITAFSDCRAAGIEKLLTRRITGHRDIIRKVAEAVYRSDSGLKD 478 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGY 540 +P SFLFAGPTGVGKTE+ L++A +R DMSE+ME+ ++++LIGAPPGY Sbjct: 479 SRRPAASFLFAGPTGVGKTELAKALAEAAFGSSGSFIRIDMSEFMEKSSITKLIGAPPGY 538 Query: 541 VGFDQG-GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 G+ +G L + V +HP++++L DEIEKA +V N+LLQ++D G +TD+ K FR+ Sbjct: 539 AGYSEGRSNLCEQVRRHPYSLVLFDEIEKADTEVLNLLLQILDEGVITDSEMHKISFRSC 598 Query: 600 VLVMTTNAGVR-ETERKSIGLIHQDNSTD--AMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 ++MT+N G T S+G + + + I++ F+PEF NR+D I F L++ Sbjct: 599 FIIMTSNIGADLVTGNSSMGFGSSAETVNERVTDRIRQYFSPEFINRIDEIAVFGKLNSC 658 Query: 657 VIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAE-KGYDRAMGARPMARVIQDNLKKP 715 + + + +L+ + G+++E S++ + K DR GARP+ R I D ++ Sbjct: 659 DLLGITRNLLSDLKRRSQSIGITVEYSEKTVEIFSRTKDTDR-YGARPIRRRITDMIENK 717 Query: 716 LANELLFGSLVDGGQVTV 733 LA ++ + G V V Sbjct: 718 LAQMIVNREVAKGDSVRV 735 >UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XL03_ORYSJ Length = 877 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 245/634 (38%), Positives = 360/634 (56%), Gaps = 111/634 (17%) Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 F +L A G IDP+IGR+ E+ER +Q++CRR KNNP+L+GE+GVGKTAIAEGLA +I Sbjct: 262 FCLDLTMRASGGLIDPVIGRKDEIERVVQIICRRTKNNPILLGEAGVGKTAIAEGLAHKI 321 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT------------- 278 GDVP + I SLD+ L+AG K RG+ E R +L++++ + Sbjct: 322 ANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKADPKLPFLVFNLQRA 381 Query: 279 ------NSILFIDEIHTIIGAGAAS----GGQVDAANLIKPLLSSGKIRVIGSTTYQEFS 328 + ILFIDE+HT+IG+G A G +D ANL+KP L+ G+++ I STT E Sbjct: 382 PKFHAGDVILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIASTTLDEHR 441 Query: 329 NIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY 388 F+KD+ALARRFQ + + EPS E+ V+I+ GL+ KYE +H +YT +++ AAV L+ +Y Sbjct: 442 LHFDKDKALARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLESINAAVYLSARY 501 Query: 389 INDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA-----------DIESV-----VAR 432 I DRHLPDKAID+IDEAG+RAR M KRKK + +I +V VA Sbjct: 502 IADRHLPDKAIDLIDEAGSRAR-MESFKRKKEEQCSILSKSPDEYWQEIRAVQNMHEVAL 560 Query: 433 IARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFL 492 ++ + S++Q+D++ D + + + G+DK A S L Sbjct: 561 TNKV-KYSLNQNDQE------DAVDIELVGEDKTSPA--------------------SML 593 Query: 493 FAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 T K TV R DMSEYMERH VS+LIG+PPGY+GF +GG LT+A Sbjct: 594 ---STSTDKKSATV-----------RLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEA 639 Query: 553 VIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET 612 V + P V+LLDEIEKAHPD+FNILLQ+ ++G LTD+ GR+ F+N ++VMT+N G Sbjct: 640 VRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSI 699 Query: 613 E--RKSIGLIHQDNSTD---------AMEEIKKIFTPEFRNRLDNIIWFDHLS------- 654 ++SIG Q ++ + MEE+K F PE NR+D ++ F L Sbjct: 700 SNGKRSIGFQTQTDTEEKSYAAMKSLVMEELKAFFRPELLNRIDEVVVFHPLEKTQACCF 759 Query: 655 ------------TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 + + +++ + E++ ++ G+ LEVS ++ +++ GYD++ GAR Sbjct: 760 YRYCTCILPCTFVNTMLAILNIMLQEVKGRILALGIGLEVSDSMKDLISQHGYDKSYGAR 819 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 P+ R + ++ ++ +L G G + V D Sbjct: 820 PLRRAVTQLVEDVISEAILSGQFKPGDTIMVDTD 853 >UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KIW5_TOXGO Length = 983 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 287/840 (34%), Positives = 431/840 (51%), Gaps = 132/840 (15%) Query: 21 RHEFMTVEHLLLALLSNP---SAREALEACSVDLVALRQELE-AFIEQTTPVLPASEEER 76 +H ++ HL+ LL P + ALE LR+++ I V P S E Sbjct: 119 QHPELSRVHLVACLLDMPGDTTVPTALEKAGGKSADLRKDMHNLLIRMPQSVTPLSYGEA 178 Query: 77 DTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVS---RLD 133 ++ L +RV+ A QS G V +++ A+ +A +VS +L Sbjct: 179 RSRSEL--KRVIIDAYNEAQSRGHRLVGVHDLVTALARCDRFRARLANVGTDVSVFLKLV 236 Query: 134 VVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREK 193 FI H T++ + + P + G +E ++ F ++ + A+ G I + GRE Sbjct: 237 TSAFIVH-------TEAEERKATP---ARTGSQEWIKTFGVDMTEQAKEGKIGTVTGREA 286 Query: 194 ELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 E+E+ V+ R K N LL+GE GVGKTA+ EGLA RIV GDVP+ + ++SLD+GSL Sbjct: 287 EIEQITSVMSRMSKANCLLIGEPGVGKTAVVEGLAKRIVDGDVPDALLGVQVFSLDVGSL 346 Query: 254 LAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS 312 L+G+ RG+FE+R K +L L D ++ILFIDEIHT++GAG A G +DAANL+KP L+ Sbjct: 347 LSGSSMRGEFERRMKGILDYLFASDRSTILFIDEIHTLMGAGKADG-PMDAANLLKPALA 405 Query: 313 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVR 372 G +RVIG+TT E+ E+D A ARRF I++ EP + +T+ ++ G++ E HH + Sbjct: 406 RGALRVIGATTRAEYRKHIERDMAFARRFVTIEMKEPDVAKTITMLKGIRKNLENHHKLT 465 Query: 373 YTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA------RARLM-------------- 412 T A+ AA L+ +YI R LPDKAID+ID+A A RLM Sbjct: 466 ITDGALVAAATLSDRYIKSRQLPDKAIDLIDDACAIKKVKSLRRLMNERAANEEKNDNGG 525 Query: 413 ------------------------PVSKRKKTVNV---ADIESVVARIARIPEKSVSQSD 445 ++K + + AD+ VV+ IP ++++D Sbjct: 526 SGDASSSANGDGEKKRDDLEKLEAEIAKEAEDADALTDADVADVVSLRTGIPVNKLTETD 585 Query: 446 RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVT 505 R L +L L+ V GQ++A+EA+ AI +RAGL + P+G+FLF G TGVGKTE+ Sbjct: 586 RQRLLSLPASLQAQVIGQEEAVEAVANAIIRSRAGLARRNAPIGTFLFLGSTGVGKTELA 645 Query: 506 VQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLL 562 L+ A+ + L+R DMSEY E HTV+RL+G+PPGYV D+GG LT+AV + PH+V+L Sbjct: 646 KALTAAIFHDEKNLIRLDMSEYSEPHTVARLVGSPPGYVSHDEGGQLTEAVRQRPHSVVL 705 Query: 563 LDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR------------ 610 DEIE AHP+VF LLQ++D G LTD G DF N V++ T+N G + Sbjct: 706 FDEIENAHPNVFAYLLQLLDEGRLTDMRGITVDFTNCVIIATSNIGAKHILAASEKAGDE 765 Query: 611 ----------ETERKSIGLI----------------HQDNSTDAMEEI---KKI------ 635 ++ER+ + I +D+++ A E+ KK+ Sbjct: 766 ASGKVTIGHFDSERQQLEHIADANAGAQVAEEVNGDKKDSTSPAQEKALARKKVANWKTQ 825 Query: 636 ------------FTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS 683 F P+ NR+ +I FD L+ + ++ L L ++ + L V Sbjct: 826 ARAAVLAEAARVFKPQVLNRM-TVIIFDPLTPQDLKRIFRLQQKGLADLLSEQRIDLVVE 884 Query: 684 QEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDK-EKNEL 742 ++A ++ E+ Y R GAR + R N+ LA +L G L G + + + K KN L Sbjct: 885 EDAVTFVVERAYSRHFGARRLKRFFDKNITGRLAPWILSGWLRSGMMLRIIVSKTRKNSL 944 >UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacterineae RepID=A7HAC7_ANADF Length = 840 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 251/611 (41%), Positives = 349/611 (57%), Gaps = 33/611 (5%) Query: 139 SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERA 198 S GTR + DP P + NL +LA G +DPL+GRE+E+E A Sbjct: 237 SRGTRARRSPHALDPKELPW----------LSQLGRNLTELAAAGRLDPLVGREQEVEEA 286 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 I VL +RR NNPLLVGE GVGKTAI EG+A R++Q V I +D+ S++AGT Sbjct: 287 IDVLGKRRTNNPLLVGEPGVGKTAIVEGIAQRLLQSARERV-----IVEIDMASVVAGTS 341 Query: 259 YRGDFEKRFKALLKQLEQDTNSIL-FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 RG F ++ + +++ + ++ FIDEIHT++GAG A G DAAN +K L G+ Sbjct: 342 LRGAFSEKLLGIQEEVRRAAGRVVVFIDEIHTLMGAGQAGEGPQDAANELKAALGRGEFP 401 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 IG+TT+ E+ EKD AL RRF + + EPS+ +TV I+ GL P+YE HH VR+ A Sbjct: 402 CIGATTHDEYRQHIEKDPALERRFTPVLVREPSVADTVTILRGLAPRYEKHHRVRFADGA 461 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 + AA L+ +Y+ DR LPDKA+ +D AG+RA V+ AD+ VA++A IP Sbjct: 462 LEAAASLSARYVTDRFLPDKAVSALDLAGSRAS----RAGAAEVDAADVARTVAKMAGIP 517 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 E + SDR+ + L L+ V G AI + +K AG +P+GSFLF GPT Sbjct: 518 ESRLLASDRERILGLEVALRDRVVGHADAIARVAAVLKRNFAGFA-TRRPMGSFLFLGPT 576 Query: 498 GVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 GVGKTE+ L+ AL L++ DMSE E V+RL+GA PGYVG+ +GG LTDAV Sbjct: 577 GVGKTELARALADALYGAPDALVQLDMSECAETTGVARLVGAAPGYVGYGEGGQLTDAVR 636 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 + P +V++LDEIEKAH DV +LLQV++ G LTD GR+ DF N V+V+T+N G E R Sbjct: 637 RRPASVVVLDEIEKAHRDVQMLLLQVLEEGRLTDGRGRQVDFSNAVVVLTSNLGAEEATR 696 Query: 615 KSIGLIH-------QDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 S G + Q + ++ + PE NRLD + F LS + + +V + Sbjct: 697 TSTGAMGFGAAERVQPRTDRVLQAARGAVPPELWNRLDERVCFSPLSREDVAKVARLLVA 756 Query: 668 ELQVQLD-QKGVSLEVSQEARNWLAEK-GYDRAMGARPMARVIQDNLKKPLANELLFGSL 725 +L+ ++ + E + A L E G+D A+GARPM IQ ++ PLA +L G L Sbjct: 757 GSSRRLEAERRIRFEATDGAIAHLVENGGFDAALGARPMRGAIQRLVEAPLAERILAGEL 816 Query: 726 VDGGQVTVALD 736 G V +D Sbjct: 817 GPGDVAIVDVD 827 >UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G683_9DELT Length = 767 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/337 (55%), Positives = 249/337 (73%), Gaps = 2/337 (0%) Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 +V +E+V+AR+ARIP KSVS DR LK LG+ L+ ++FGQD+A+ T+AIK ARAGL Sbjct: 416 DVPQVETVIARMARIPPKSVSTDDRAVLKGLGEGLRQVLFGQDEAVATATKAIKRARAGL 475 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYV 541 KP+G FLF GPTGVGKTE+ QL++ LG+ LRFDMSEYME+H+VSRLIGAPPGYV Sbjct: 476 ARPDKPIGCFLFTGPTGVGKTELARQLARLLGMPFLRFDMSEYMEKHSVSRLIGAPPGYV 535 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 GFDQGG LTD+V K+PH+++LLDEIEKAHPD+F++LLQVMD+ TLTD G+K DFRNV+L Sbjct: 536 GFDQGGQLTDSVAKNPHSIVLLDEIEKAHPDIFSVLLQVMDSATLTDTTGKKTDFRNVIL 595 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTD--AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 +MT+NAG E ++ +G D + D A + +++ F+PEFRNRLD I+ F L VI Sbjct: 596 IMTSNAGAFEMTQRKVGFGSDDGNVDSAANKALERTFSPEFRNRLDKIVTFGQLPQPVIE 655 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719 +V DK + EL++QL ++ V L + AR+W++ KGYD+ GARPMARVI + +K L +E Sbjct: 656 KVADKMLRELEIQLSERDVRLTWTPAARDWVSRKGYDKKFGARPMARVIDEAIKGALVDE 715 Query: 720 LLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 LLFG L GG V V D+ ++EL + F + + + EA Sbjct: 716 LLFGRLEGGGSVEVDCDRAEDELVFRFTARDEDEGEA 752 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 189/342 (55%), Positives = 247/342 (72%), Gaps = 7/342 (2%) Query: 82 LSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHG 141 + RVLQRAV HVQ +G+ EVTGAN+LVA+F+E ES A YLL + V R DV FISHG Sbjct: 1 MGVGRVLQRAVLHVQGAGKAEVTGANLLVALFAEPESMAVYLLEQKGVRRRDVTLFISHG 60 Query: 142 -----TRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELE 196 +R ++ + PG+ +E + ++ + + +L A G IDPL+GRE+EL Sbjct: 61 IGKGNSRSAPRSRPTGPGAD-GEDEDSVADDPLTAYAVDLAARAASGDIDPLVGREQELT 119 Query: 197 RAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAG 256 R IQVLCRRRKNNP+LVGE GVGKTA+ EGLA + VPE +AD IY+LD+GSLLAG Sbjct: 120 RLIQVLCRRRKNNPVLVGEPGVGKTAVVEGLALAVHDQKVPEPIADAHIYALDMGSLLAG 179 Query: 257 TKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 TK+RG FE+R KA++ +E+ +ILFIDEIHT+IGAGA SGG +DA+N++KP L++G++ Sbjct: 180 TKFRGQFEERLKAVVAAIEEQPGAILFIDEIHTVIGAGATSGGSMDASNMLKPALNAGRV 239 Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAK 376 R IG+TTY+E+ N F++D ALARRFQKI+I EP+ +E + I+ GLKP YEAHH+V YT Sbjct: 240 RCIGATTYKEYKN-FDRDPALARRFQKIEIVEPTTDEAILILQGLKPAYEAHHNVSYTPD 298 Query: 377 AVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 A+ +V LA KY+ DR LPD AIDV+DE GA ARL K K Sbjct: 299 AIEESVRLAHKYLRDRRLPDSAIDVMDETGAAARLGDYGKAK 340 >UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q6N1_MALGO Length = 853 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 277/837 (33%), Positives = 441/837 (52%), Gaps = 127/837 (15%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPSA----------------REALEACSVDLV 52 SL AF A+++ H + H+ LALL++ ++ + E V + Sbjct: 13 SLAAAFQLAKDYAHAQLAPSHIALALLNDDTSNSTGVQSTNKDSQSLFKSICEKTGVSVP 72 Query: 53 ALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAI 112 L +L A + + PA + D T + ++++ A + + +VL+A+ Sbjct: 73 DLENKLRAALRKIPQQSPAPD---DVSLTGAASKIMKNAQQYKTQQRDAFIAQDHVLLAL 129 Query: 113 FSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENF 172 ++S +L++ ++ D++ K+ TQ+ G +S+ G + M + Sbjct: 130 L--EDSSINNMLKEAGLANPDLM--------KNAITQARG-GRHIDSKTAEAGYDAMGKY 178 Query: 173 TTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 T+L LA G +DP+IGR+ E+ R ++VL RR KNN +L+G GVGKTA+ EGLA R++ Sbjct: 179 CTDLTALAAEGKLDPVIGRDNEIRRVVRVLSRRTKNNAVLIGSPGVGKTAVVEGLAQRVI 238 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN----SILFIDEIH 288 DVP + IYSLD+G L+AG KY+G++E+R KA+L +E+ TN ILFIDE+H Sbjct: 239 DRDVPPNLL-GKIYSLDMGGLMAGAKYKGEYEERVKAVLSDIEKMTNDGTPCILFIDEMH 297 Query: 289 TII-GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 ++ G G +G +DAANL+KP+L+ GK+R IG+TT E+ EKD AL RRFQ++ + Sbjct: 298 LMMAGKGGDTG--MDAANLLKPMLARGKLRCIGATTLNEYRQSIEKDAALERRFQQVIVE 355 Query: 348 EPSIEETVQIINGLKPKYEAHHDV---------------RY-TAKAV-RAAVELAVKYIN 390 EP++E+T+ I+ GL+ KYE HH V RY TA+ + +A++L + Sbjct: 356 EPTVEDTIAILRGLREKYEVHHGVRILDAAVVSAAQLAKRYLTARKLPDSAIDLVDESCA 415 Query: 391 D----RHLPDKAIDVIDEAGARARLM---------PVSK------RKKTVNVAD------ 425 D R +AID ++ R ++ P SK R++ ++ D Sbjct: 416 DVTVSRETVPEAIDTLERRKVRLQIAMTALEREKDPQSKERLEETRQELAHLDDELAPMK 475 Query: 426 ------------IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 + +V +I + K+ R L+ D + + +K E L E Sbjct: 476 AEFEAQRAKGDELNNVRRKIEELRAKASDAERRYDLETASDLMYYAIPDLEKRAEQLQEQ 535 Query: 474 IKMARA-------------GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LL 517 + A + ++P+ SFLF GP+G GKT ++ L+ + + ++ Sbjct: 536 ARKDEAEGKTSQANTVTSENIASINRPIASFLFCGPSGTGKTLMSKTLASYMFDDPDAMV 595 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 R D SEY E+H++SRLIGAPPGYVGFD+GG+LT+AV + P +++L+DEIEKA + + Sbjct: 596 RIDASEYSEKHSISRLIGAPPGYVGFDEGGVLTEAVRRRPFSIVLIDEIEKAAREFVQLF 655 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKI-- 635 LQV+D G L D+ GR FRN +++MT+N G I++ D E ++++ Sbjct: 656 LQVLDEGRLQDSQGRLVSFRNTIIIMTSNLGS--------SFINESEDEDLTESVRQLVQ 707 Query: 636 ------FTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKG--VSLEVSQEAR 687 F PEF NR+D+I+ F L + ++VD I ELQ +L + G L V +EA+ Sbjct: 708 GAISAHFPPEFINRIDSIVTFRKLGRVDVRRIVDIRIKELQKRLIENGRQSRLVVDEEAK 767 Query: 688 NWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSL-VDGGQVTVALDKEKNELT 743 +WL GY MGARP+ R IQD L PL+ +L G + D ++ ++ DK +N LT Sbjct: 768 DWLGSIGYSPTMGARPLGRAIQDQLLNPLSMLILRGQIHNDDPEIHISFDKYRNALT 824 >UniRef50_C2EIG8 ATP-dependent Clp protease n=4 Tax=Lactobacillales RepID=C2EIG8_9LACO Length = 636 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 230/602 (38%), Positives = 371/602 (61%), Gaps = 43/602 (7%) Query: 169 MENFTTNLNQLARVGGID-PLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGL 227 ++ +TTNL+ A+ D + GREKE+E I L R+ KN+PLL+GE+GVGKTAI EG+ Sbjct: 36 LDQYTTNLSIKAQSRPDDYEVYGREKEIEDIIISLMRKTKNSPLLIGEAGVGKTAIVEGV 95 Query: 228 AWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDE 286 A RI++ VPE + D T+ SL++ SL++ T G F +FKA++++L ++LFIDE Sbjct: 96 ALRIIRNQVPESLQDLTVRSLELSSLMSDT-VEGSFLAKFKAIIEELVATKGENLLFIDE 154 Query: 287 IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 IHT++GAGA +G +DA N++KP L+ G+I++IG+TT E+ E DRAL RRFQ I I Sbjct: 155 IHTLMGAGA-NGQALDAGNVLKPALARGEIQMIGATTIDEYHETIENDRALQRRFQNIQI 213 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EP+ E+ + I+ G+ P +E H V+ A++AA+ L+V+YI DR LPDKA+D++DEA Sbjct: 214 DEPTKEQALVILQGVTPSFENFHQVKIKESALKAAINLSVRYIPDRFLPDKALDLLDEAS 273 Query: 407 ARARLMPVSKRKKTVNVADIE--SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD 464 ++ + + NV+++E V+ R IP ++ +++ D LKN+ RL V GQ+ Sbjct: 274 T------IASSQNSTNVSEVEIAEVLKRRTGIPVTTILRAEEDRLKNIESRLSKRVKGQE 327 Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDM 521 A++ +++A+ ++RAGL E KP+G+FLF G TGVGKTE+ L++ + + ++R DM Sbjct: 328 FAVKEVSDAVTISRAGLQDETKPLGTFLFLGTTGVGKTELAKSLAEVVFDDENAMIRLDM 387 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM 581 SE+ + + +LIG G+LT+AV P++++L DE+EKA +V ++LLQ++ Sbjct: 388 SEFSQPGSSLKLIGTRK------TKGVLTEAVKHRPYSIVLFDELEKADREVHDLLLQIL 441 Query: 582 DNGTLTDNNGRKADFRNVVLVMTTNAGVRET--------ERKSIGLIHQDNSTDAME-EI 632 D+G LTD GR F+N +++MTTN G + + +++ L + ++M+ E+ Sbjct: 442 DDGRLTDGTGRLISFKNTIVIMTTNIGADKIKLNEELKGDIENLSLREYNQFIESMDIEL 501 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAE 692 + F PEF NR+D+ + F L +VI ++ K + L ++ ++ L ++E ++LA Sbjct: 502 QTEFRPEFINRIDHKVVFKMLGEEVIREIAIKDLEILDQRMQKQKAKLVYNEELLDYLAF 561 Query: 693 KGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKH 752 G D GARP+ R+I + P++ +LL L K KN + Y F+ K Sbjct: 562 NGTDVNNGARPLMRLINRKVLAPISRKLL------------TLPKRKN-VEYIFKVVVKG 608 Query: 753 KA 754 KA Sbjct: 609 KA 610 >UniRef50_D1Z247 ATP-dependent Clp protease ATP-binding subunit ClpA homolog n=1 Tax=Methanocella paludicola SANAE RepID=D1Z247_METPS Length = 782 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 221/575 (38%), Positives = 342/575 (59%), Gaps = 26/575 (4%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +E +L + A G + P R+KEL + IQVL RR KNNP+L+GE+GVGKTA+ E LA Sbjct: 194 LEKHGRDLTREAMAGRLGPFSERKKELLQLIQVLGRRAKNNPVLIGEAGVGKTAVVEALA 253 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RI +G V+ I L + SL+A TKYRGD E+R +L + D +LFIDEIH Sbjct: 254 MRIARGKDAHVLGGKRIIQLSMASLVANTKYRGDLEERLTGVLDEAVADPGIVLFIDEIH 313 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 T++GAG + G +DA+N++KP L G +R IG++T E+ E D AL RRF+ I + E Sbjct: 314 TVVGAGRSDGSALDASNILKPYLVRG-LRCIGTSTIAEYHRHIEADPALERRFETILVEE 372 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 P EE + ++ L+PK E HH VR +A+ A+V+L++++ + LPDKA+D++D A + Sbjct: 373 PCREEALAMLGTLRPKLEEHHGVRILDEALEASVDLSMRFDAEHMLPDKAVDLLDMACSG 432 Query: 409 ARLMPVS-----KRKKTVNVADIESVVARIARIP-EKSVSQSDRDT---LKNLGDRLKML 459 AR+ +S + ++ V+ I +A A +P E + S + T L L L+ Sbjct: 433 ARIPVLSMGSMDEPRRQVDARSIAETLAGSAGMPLELAASHLEGPTTSRLLGLEGFLRGR 492 Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIEL 516 + GQ++AI +++ + +A +G+ P+ FLF GPTGVGKTE L++ L E+ Sbjct: 493 LAGQEEAIAKVSKRLMVAYSGIEKRQGPLAVFLFTGPTGVGKTETARLLAEFLFGSPSEM 552 Query: 517 LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNI 576 +R D+SEY E ++V+RLIG+PPGY+G+++ GLL + P+ V L DE+EKAHP VF++ Sbjct: 553 IRLDLSEYSEENSVARLIGSPPGYIGYEESGLLVRMLRARPYTVALFDEVEKAHPRVFDV 612 Query: 577 LLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKK-- 634 LQ+ D G +TD+ GR AD RN + ++T+N + G + + + M+ + Sbjct: 613 FLQLFDEGRITDSKGRTADARNAIFILTSNL-------EPGGGVSYEEMEEGMKRRPRKK 665 Query: 635 ---IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWL 690 F PE NR+D I+ F L D + +++ K + E +L++ V+L +S EA ++L Sbjct: 666 GLETFKPELINRIDEIVSFRPLDVDAVRRLLRKTLTETLAELERTHHVALRLSDEAEDYL 725 Query: 691 AEKGYDRAMGARPMARVIQDNLKKPLANELLFGSL 725 A GY GAR + RV++ + PL+ +L G L Sbjct: 726 ARAGYSPEYGARELRRVVRQFIYVPLSRLILTGEL 760 >UniRef50_A3CKB2 ATPase with chaperone activity, ATP-binding subunit, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CKB2_STRSV Length = 638 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 221/581 (38%), Positives = 352/581 (60%), Gaps = 30/581 (5%) Query: 160 EEQAGGEERMENFTTNLNQLARVGGID--PLIGREKELERAIQVLCRRRKNNPLLVGESG 217 EE+ ++ +T N+ + R ID + GR+KE+E+ I L R+ KN+P+LVGE+G Sbjct: 31 EEEESLTPYLDKYTENVTEKIR-KKIDNFTVFGRDKEVEQVIVSLLRQTKNSPILVGEAG 89 Query: 218 VGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG-DFEKRFKALLKQLE- 275 GKTAI +GL I++G+VP+ T+ SL++ ++ +K G D R K ++++L+ Sbjct: 90 TGKTAIVDGLVVEILKGNVPDEFKHVTVRSLELSNI--SSKSDGEDMVSRLKRIIEELKV 147 Query: 276 QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDR 335 +ILFIDE+HTI+GAG G +DA N+IKP L+ G+I++I +TTY+E+ + E D+ Sbjct: 148 TKGENILFIDEVHTIVGAGG-DGSMLDAGNVIKPPLARGEIQMISATTYEEYQSSIETDK 206 Query: 336 ALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLP 395 AL RR Q + + EP+ ++ + I+ ++ ++E ++ T AV AV LAV+YI +R LP Sbjct: 207 ALERRVQMVPVEEPTEDQAIFILGNIRRRFEKERNITITDDAVEQAVRLAVRYIPERFLP 266 Query: 396 DKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 DKAID++D+A A+A +++K V++ DI V+ ++ +IP ++ + D + L N D Sbjct: 267 DKAIDLLDDATAQAYF----EKRKVVDIEDIARVIQKMKKIPVTTILKDDSERLMNFTDE 322 Query: 456 LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE 515 LK V GQD A+ + I +++ G +KP+GSFLF G TGVGKTE+ L+K L Sbjct: 323 LKKYVKGQDFAVSQVANTIYISKEGFQRPNKPLGSFLFLGTTGVGKTELAKALAKILFDN 382 Query: 516 ---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 ++R D SEY + +LIG VG GLLT+ V +P++V+LLDE+EKAHPD Sbjct: 383 VDAMIRIDCSEYSSKGDKDKLIGK--NIVG--SKGLLTEPVKNNPYSVVLLDELEKAHPD 438 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER---------KSIGLIHQD 623 +++ILLQV+D G LT GRK +F+N +++ TTN+G E ++ + L ++ Sbjct: 439 IYDILLQVLDEGHLTTGTGRKINFKNTIVIATTNSGADEIKKTYANEGNFGEMTDLAYEG 498 Query: 624 NSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS 683 +EE+ F PEF NR N + F+ L+ D+I +VD + + +L ++ V L+ Sbjct: 499 FMNRIVEELSLTFRPEFINRFGNKVVFNMLTADIIEAIVDLAWKKEEKRLAEQKVYLQYE 558 Query: 684 QEAR--NWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 +A ++L KG GARP+ R+IQD + P+A +L Sbjct: 559 DKAEFYDFLRSKGTSVENGARPLERLIQDRVTGPIAEKLFL 599 >UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1 Tax=Sorghum bicolor RepID=C5YMW4_SORBI Length = 818 Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust. Identities = 232/614 (37%), Positives = 348/614 (56%), Gaps = 81/614 (13%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ + T+L LA G +DP+IGR+K++++ +Q+L R+ KNNP L+GE GVGKTA+ E LA Sbjct: 252 LDEYGTDLTTLANKGKLDPVIGRQKQIDQVVQILSRKGKNNPCLIGEPGVGKTAVVESLA 311 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 I GDVPE M G K+ +H Sbjct: 312 QLIAMGDVPETMQ--------------GKKF--------------------------TLH 331 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 T++GAGAA G +DAAN++KP L+ G+++ IG+TT + EKD AL RRF+++ + E Sbjct: 332 TLVGAGAAVEGAIDAANILKPALARGELQCIGATTTDGYMKHIEKDPALERRFRQVKVPE 391 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 P +EE ++I+ GL+ +YE HH V+Y +A+ AA EL+ KYI+DR LPDKAID+IDEAG+ Sbjct: 392 PMVEEAIEILKGLRERYETHHKVQYADEALSAAAELSHKYISDRFLPDKAIDLIDEAGSL 451 Query: 409 ARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR------------- 455 RL ++ K + D + + +I + ++ + K L DR Sbjct: 452 VRLRH-AQPKLPKELQDFVTEIKKITKEKCDTIRIENFKKAKELRDRELELKSQLTTTLQ 510 Query: 456 ---------LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTV 506 L + GQD+A+ A++ AI+ AR GL +P+ SF+FAGPTGVGK+E Sbjct: 511 IGNDEDGGGLHRRIIGQDEAVTAVSRAIRRARVGLSDPRRPIASFVFAGPTGVGKSE--- 567 Query: 507 QLSKALGI-------ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL-LTDAVIKHPH 558 L+KA+ ++R DMSE ME+H V+RL+GAPPGYVG +GG LT+AV + PH Sbjct: 568 -LAKAVAAYYYGSEDAMVRLDMSELMEKHAVARLVGAPPGYVGHGEGGGQLTEAVRRRPH 626 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG 618 +++LLDE++KAHP+V ++LLQV+D+G LTD GR DFRN +++MT+N G Sbjct: 627 SLVLLDEVDKAHPEVMDVLLQVLDDGRLTDGMGRTVDFRNTLIIMTSNIGGGNGGSGDGS 686 Query: 619 LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKG- 677 + EE+K+ F PEF NRLD I F L+ ++ + ++ ++ ++ Sbjct: 687 RSSSKEVVE--EEMKRYFRPEFLNRLDETIVFRPLTRVDGKEIAAVLVSDVAARVSRETM 744 Query: 678 --VSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ-VTVA 734 V L V++ + + E+G+D GAR + R + L+ LA++LL G +V G V V Sbjct: 745 MVVELRVTERFMDLVVEEGFDPWYGARALRRAVVMLLEDTLADKLLDGEIVKAGDTVIVD 804 Query: 735 LDKEKNELTYGFQS 748 D N + G S Sbjct: 805 ADAAGNVVVLGPDS 818 >UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=A3A5U3_ORYSJ Length = 691 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/611 (35%), Positives = 354/611 (57%), Gaps = 36/611 (5%) Query: 161 EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 + A + ++ F +L A DP++GRE+E++R + +L R+ KN+ +LVG +GVGK Sbjct: 47 QPAAAKGTLDAFGRDLT--AEAANADPVVGREEEIDRVVCILSRKSKNSAVLVGAAGVGK 104 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 280 TAIAEGLA RI +G+V V+ + L++ ++++GT YRG FE+R ++ + E + ++ Sbjct: 105 TAIAEGLAQRIARGEVSGVLEGARVVELNVAAMISGTSYRGTFEERMTGVIAEAEAEADA 164 Query: 281 -----ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDR 335 +LF+DEIH ++GAG SGG +DA+N++KP L+ G++R +G+TT+ E+ +D Sbjct: 165 AAGKVVLFVDEIHMLLGAGRVSGGCIDASNMLKPALARGRVRCLGATTHDEYHRYMVRDA 224 Query: 336 ALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLP 395 A RRFQK+ + EPS+++TV I+ LKP Y+ HH V Sbjct: 225 AFERRFQKVHVAEPSVDDTVAILRRLKPSYQDHHAWISRTPPSSPPPSSPVA-------T 277 Query: 396 DKAIDVIDEAGARARLMPVSKRKKTVNVA---DIESV----VARIARIPEKSVSQSDRDT 448 +AID++DEA A ARL+ ++KK A E+V +A+ IP S+ + +R Sbjct: 278 SQAIDLVDEACATARLLMDRRKKKQAQAAVAPKDENVGPDHIAQWTGIPVASLGEDERKK 337 Query: 449 LKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL 508 L L L V GQD+A+ A+ EA+ +R+GLG+ ++P GSFLF GPTGV KTE+ L Sbjct: 338 LLELPQLLHRRVIGQDEAVGAVAEAVVRSRSGLGNPNQPSGSFLFLGPTGVSKTELAKAL 397 Query: 509 SKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDE 565 ++ L L+R DMSEY+ +V+RLIG+ PG G+D+GG LT+ V P++V+L DE Sbjct: 398 AEQLFGNAKLLVRIDMSEYVNASSVTRLIGSAPGTNGYDKGGQLTELVRCRPYSVVLFDE 457 Query: 566 IEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS 625 +EKA VFN+ LQ++D+G LTD GR DF N +++MT+N G + + + Sbjct: 458 VEKADAAVFNVFLQILDDGRLTDGQGRTVDFTNTIIIMTSNLGAQHLADAAAADASHKDD 517 Query: 626 TD----------AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ 675 + ++++ F PE +RL ++ F LS + + +V + + +L + Sbjct: 518 ATEAAAAAAKQRVLADVQRHFRPELISRLTEMVVFRPLSGEQLRKVARLQLRGMAARLAE 577 Query: 676 KGVSLEVSQEARNWLAEKGYD--RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 KG+ L+V+ A + + + D RA GARP+ R ++ ++ ++ ++ D VTV Sbjct: 578 KGIGLDVANAALDVVLARSSDQVRAYGARPIKRCLEKDVMTRISKMVVQEEADDDCYVTV 637 Query: 734 ALDKEKNELTY 744 D+ K EL + Sbjct: 638 EADQGKEELVF 648 >UniRef50_B5RQH1 ATP-dependent Clp protease, subunit C n=24 Tax=Borrelia RepID=B5RQH1_BORRA Length = 744 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 196/558 (35%), Positives = 325/558 (58%), Gaps = 11/558 (1%) Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 + NL LA+ +DPLIGREKE++ I +L RR KN+ +L+GE G+GKTAI EGLA +I Sbjct: 161 YVKNLTTLAKEKKLDPLIGREKEIQSLISILERRNKNSTILIGEPGIGKTAIVEGLAIKI 220 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 ++ + + I ++ L++GTKYRG+FE+R ++K ++ + N I+FIDEIHT+I Sbjct: 221 ANKEIKSQLQNKIILQIETSDLVSGTKYRGEFEERLNNIIKSIKNNKNIIIFIDEIHTLI 280 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 GAG S G +DAAN++KP+LS I++IG+TTY E+ KD+A RRFQ I I EP Sbjct: 281 GAG-NSEGSIDAANILKPILSRSAIQIIGATTYDEYRKHISKDKAFTRRFQTISIKEPDE 339 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 +ET+ IIN + +E +H V Y +A+ + L+ +Y+ +R PDKAID+ID AGA+ + Sbjct: 340 KETLNIINSIIKNFENYHGVTYEKEAIENVISLSSQYLTNRKFPDKAIDLIDIAGAQKKQ 399 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 ++ K VN D+++ I K + LK +K + GQ+ AI+ + Sbjct: 400 QEIN--TKIVNAEDVKNTTDEFFGIKVKLSLTEEIAYLKEETINIKEKIIGQESAIDEII 457 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERH 528 + + G+ + +P+ S L G +G GKT ++ +SK + + +L+ DMS+Y E Sbjct: 458 IEMVKTKLGINNNIQPLTSILLIGSSGSGKTILSKTISKIMIKDQNSILQLDMSDYREET 517 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 ++S+LIG PGY G+ GG+L + + +P A ++ + IE AH V +I+ Q+++NG L D Sbjct: 518 SISKLIGTNPGYAGYTDGGILINRLKYNPRAFIIFENIEYAHNSVMSIIEQILENGELID 577 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSI-GLIHQDNSTDAM----EEIKKIFTPEFRNR 643 N K F+N ++V++T+ G + K I G DN+ D E+K F ++ Sbjct: 578 NTEDKISFKNSIIVLSTSIGSKILLGKGILGFNKTDNNIDIKSTINNELKTKFKLSLIDK 637 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 + I + L+ + + D + EL + K + +E+ +N + +K YD+ GAR Sbjct: 638 IQKKIILNVLTEKDLSIIYDNYCKELTQKFSLKNIQIEIDDSLKNHIIKKYYDKNSGARS 697 Query: 704 MARVIQDNLKKPLANELL 721 + +++N+++ + N++ Sbjct: 698 ILNAVKENIEEKIINQIF 715 >UniRef50_Q7RAR9 ATP-dependent Clp protease, ATPase subunit-related n=2 Tax=Plasmodium (Vinckeia) RepID=Q7RAR9_PLAYO Length = 1122 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 183/496 (36%), Positives = 302/496 (60%), Gaps = 66/496 (13%) Query: 162 QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 Q E+++ENF GR+ E++R I++L R++K+NPLLVGE+GVGKT Sbjct: 441 QQAYEKKLENF----------------FGRKDEIKRIIEILGRKKKSNPLLVGETGVGKT 484 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI 281 AI E LA+ I++ VP + +C I+ +++G+++AGTKYRG+FE++ K +L + +D +I Sbjct: 485 AIVEQLAYLILKNKVPYHLKNCKIFQMNLGNIVAGTKYRGEFEEKMKQILANISKDKKNI 544 Query: 282 LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 LFIDEIH I+GAG+ G +DA+N++KP LSS ++ IG+TT+QE+S E D+AL RRF Sbjct: 545 LFIDEIHVIVGAGSGEGS-LDASNILKPFLSSDNLQCIGTTTFQEYSKYIETDKALRRRF 603 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 ++I + ET +++ +K YE +H++ YT +A+++ + L+ Y+ + PDKAID+ Sbjct: 604 NCVNIKPLNSNETYKLLKKIKNSYEQYHNIYYTDEALKSIILLSDDYLPTLNFPDKAIDI 663 Query: 402 IDEAGARARLM---PVSKR------------------------KKTVNVAD--------- 425 +DEAG+ ++ ++K+ + NV Sbjct: 664 LDEAGSYQKIKYERYITKKLRNENNIKTDSIKVSTNTNSNKIDNNSTNVTSQIESNYLVD 723 Query: 426 -----------IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 IE++V++ + I ++ + + ++NL ++L ++ GQ+K I+ L + + Sbjct: 724 DLHMKYVTSDVIENIVSKKSSISFIKKNKKEEEKIQNLKEKLNKIIIGQEKVIDILAKYL 783 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE--LLRFDMSEYMERHTVSR 532 A + +KP+G+ L G +GVGKT +S+ L + ++ +MSEY+++H+VS+ Sbjct: 784 FKAITNIKDANKPIGTLLLCGSSGVGKTLSAQVISQYLFNDDNIIVINMSEYIDKHSVSK 843 Query: 533 LIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGR 592 L G+ PGYVG+ +GG LT+AV K P +++L DEIEKAH DV ++LLQ++DNG LTD+ G Sbjct: 844 LFGSYPGYVGYKEGGELTEAVKKKPFSIILFDEIEKAHSDVLHVLLQILDNGLLTDSKGN 903 Query: 593 KADFRNVVLVMTTNAG 608 K F+N + MTTN G Sbjct: 904 KVSFKNTFIFMTTNVG 919 >UniRef50_Q1WR72 ATP-dependent Clp protease n=2 Tax=Lactobacillus salivarius RepID=Q1WR72_LACS1 Length = 606 Score = 360 bits (925), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 217/571 (38%), Positives = 336/571 (58%), Gaps = 44/571 (7%) Query: 169 MENFTTNLNQLARVGGID-PLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGL 227 + +T NL AR D +IGR+KE+ + I L R+ KNNP+L+GE+GVGKTAI +GL Sbjct: 10 LSKYTINLTANARNNPDDYKVIGRDKEIVQVIFNLSRKTKNNPILLGEAGVGKTAIVDGL 69 Query: 228 AWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN-SILFIDE 286 A I V E + + I L I +L + D ++ ++K+ +Q +ILFIDE Sbjct: 70 ARLIALNQVGEKLKNKQIRVLQIAAL-----GQQDVVRKMLNIIKECKQTKGRTILFIDE 124 Query: 287 IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 IHTI+GA S G +D +++KP ++ G+I++IG+TT+ E+ EKD AL RRFQ+I + Sbjct: 125 IHTIMGADT-SNGAMDLGDVLKPAMARGEIQLIGATTFDEYDKFIEKDPALERRFQQILV 183 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EPS ++ V+++ G++ YE H + YT +AV A V+L+++YI DR LPDKAID++D+AG Sbjct: 184 NEPSRDDAVKVLFGIRDNYEKFHHLVYTDEAVEACVDLSLRYIGDRQLPDKAIDLLDQAG 243 Query: 407 ARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKA 466 + A +K ++ ++V DI V+ + IP ++ ++D LKNL +L +V GQ +A Sbjct: 244 SIA----ATKGQEIIDVKDIALVLQDMKGIPVTNILKNDSSRLKNLDKKLAKVVKGQAEA 299 Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSE 523 I+ +T+A+ +A+AGL KP+ SFLF G TGVGKT +T+ +++ + L+R DMSE Sbjct: 300 IKTVTDAVTIAKAGLQDPTKPISSFLFLGTTGVGKTALTLAMTEVMFDSTDNLIRIDMSE 359 Query: 524 YMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDN 583 + ER ++ R LLT V + P+ ++LLDEIEKA V + LLQV+D Sbjct: 360 FSERESLDRF------------QDLLTMQVKRKPYCIILLDEIEKACTAVHDRLLQVLDA 407 Query: 584 GTLTDNNGRKADFRNVVLVMTTNAGVR----------ETERKSIGLIHQD--NSTDAME- 630 G L D GR F+N +++MTTN G T K + L + DA + Sbjct: 408 GILRDKRGRSTSFKNTIIIMTTNLGAELIVDNQIYEANTAEKFLNLTPNEIARKQDAFKK 467 Query: 631 ----EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEA 686 E+ IF PEF NR+++ + F+ L+ D+I Q+ + L ++ G L + Sbjct: 468 EVNMELTNIFRPEFVNRIEHKVIFNMLTRDIIKQIAYNNLATLSQRMAVHGFKLVYEDDL 527 Query: 687 RNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 ++LA+ G D GARP+AR I++ + P+A Sbjct: 528 IDYLADIGTDVLNGARPLARCIEEEVSAPIA 558 >UniRef50_C3RJA5 ATPase n=3 Tax=Bacteria RepID=C3RJA5_9MOLU Length = 665 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 220/645 (34%), Positives = 361/645 (55%), Gaps = 49/645 (7%) Query: 22 HEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 H + EHLLL+LL S+ RE ++ VD + ++++ T P E D Sbjct: 25 HNNVGSEHLLLSLLKISDSKLRELVKKYDVDDKNIYEDIKRLF-GTNDDQPFYMEYSD-- 81 Query: 80 PTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFIS 139 + + +L+ A+ +++VT + +A+ +ES A LL+K++V +++ Sbjct: 82 ---AVKSILEAAMEITNQQNKSKVTLNILTIALLQSEESVAHELLKKYKVDFEEII---- 134 Query: 140 HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAI 199 + +E ++ Q S NLN+ + G ++GR+KELE+ Sbjct: 135 --YQLNESSELETKLDQIQS-------------LVNLNKKVKQGE-HLIVGRQKELEKLC 178 Query: 200 QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKY 259 +L ++ KNN L++GE+GVGK+A+ E LA+ I Q V E + IY L + S++AGTKY Sbjct: 179 MILSKKEKNNALIIGEAGVGKSALVEKLAYLINQKQVNEGLKKKIIYELSLSSIVAGTKY 238 Query: 260 RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVI 319 RG+FE++ + ++ ++++ N I+FIDEIH IIGAG A G +DAAN++KP L+ + +I Sbjct: 239 RGEFEEKLRKIIDKVKEMDNVIIFIDEIHNIIGAGGAEGA-IDAANILKPYLARKDLTII 297 Query: 320 GSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVR 379 G+TT +E+ FEKD+A+ RRF I + E + EET++I+ K YE H + + + Sbjct: 298 GATTTEEYFQHFEKDQAMNRRFSVITLKENTKEETLEILQKTKLFYEQFHQIEVDNEVLT 357 Query: 380 AAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEK 439 V+ +YI +R PDKAID+ D A +AR K++ + ++ V+ + K Sbjct: 358 YLVDNVDRYIKNRTFPDKAIDIFDLACVKARF----KQQHIITKQIVKDVIEEYTSV--K 411 Query: 440 SVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGV 499 D D +K +L + GQ KAIE + +K+ + +P LF G +GV Sbjct: 412 ISEDYDYDEIKA---KLNHHIIGQSKAIEQIINQLKLTK----QSKQPSAVMLFVGNSGV 464 Query: 500 GKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHA 559 GK+E QLSK LG +L+R DMSEY + +V ++IGA PGYVG+D+ LL + +P + Sbjct: 465 GKSESAKQLSKLLGRKLIRLDMSEYRDSSSVQKIIGAAPGYVGYDKPSLLLGQLQTYPKS 524 Query: 560 VLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL 619 ++LLDEI+KA DV N+ LQV D G L D++ RK F N +++MT+N G T + ++G Sbjct: 525 IILLDEIDKASQDVINLFLQVFDEGYLEDSHKRKVYFNNTIIIMTSNKG---TAKNTLGF 581 Query: 620 IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 ++S+ ++K F+ E +R+D II F +L+ + +++ K Sbjct: 582 KKNNHSS----KVKNFFSDELLSRIDEIINFKNLTKMDLKKIIRK 622 >UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two ATP-bindingdomains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FU98_SORC5 Length = 945 Score = 354 bits (909), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 217/599 (36%), Positives = 329/599 (54%), Gaps = 49/599 (8%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + + NL+ A G ++P++GRE E+E+A+ VL +R NNP L+G +GVGKT++A G+A Sbjct: 327 LASLGHNLSLAAVQGELEPIVGREHEIEQALDVLAKRHANNPCLLGPAGVGKTSVARGVA 386 Query: 229 WRIVQGDV-PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDE 286 R+ + P V + L LLAGT RG +R AL ++ E ILFID Sbjct: 387 HRLAFDEREPRV-----VVELVPSELLAGTGARGALSERLSALRSEVREAGGRVILFIDG 441 Query: 287 IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 + + G+GA +A IK L+ G++ +IG+ T +E+ E D ALARRF ++I Sbjct: 442 LSELFGSGALD----EAMAEIKLALARGELTMIGTATPEEYRKSIEVDPALARRFTIVEI 497 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EP +E ++ + AHH + +T +A+ +AV +V+Y+ R LPDKA+ ++D AG Sbjct: 498 DEPEEDEAFLLLQSVAVGLGAHHGLAFTDEALASAVAWSVRYLPGRALPDKALSILDLAG 557 Query: 407 ----------------------ARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQS 444 A A L ++ + V A++ VV+ +A +P + + ++ Sbjct: 558 ARTRRRASSASRASRASRTSHAAHAALHEPAQPARQVGPAEVAEVVSELADLPVERLLET 617 Query: 445 DRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEV 504 DR+ + +L L V G +A+ + ++ AGL +P+GSFL GPTGVGKTE Sbjct: 618 DRERMLSLETLLAENVVGHGEALSRIARVLRRNAAGL-RARRPIGSFLLLGPTGVGKTET 676 Query: 505 TVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVL 561 +++AL + R D SEY E H V+RL+GAPPGYVG + GG LT+AV + P+ V+ Sbjct: 677 AKAIAEALFHSPDAMTRLDFSEYAESHAVARLVGAPPGYVGHEAGGQLTEAVRRRPYQVV 736 Query: 562 LLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET----ERKSI 617 LLDEIEKAH DV LQV D G LTD GR+ DF N VLVMT+N G E +S+ Sbjct: 737 LLDEIEKAHRDVLEAFLQVFDEGRLTDGRGRRVDFTNTVLVMTSNLGAAEAGALRSERSV 796 Query: 618 GLIHQDNSTDA-------MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQ 670 G ++ + + PE NR+D ++ F L+ + ++ + + L+ Sbjct: 797 GFARSSSAVSPERLGETMLSAARAALPPELYNRIDEVLCFAPLTRADVAEITRRLLGGLE 856 Query: 671 VQLDQKGVSLEVSQEARNWLAEK-GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 +L+ +GV LEV EA + L + G+D +GARPM R I ++ PLA +L G L +G Sbjct: 857 RELEARGVELEVEPEAIDALLDAGGFDPELGARPMKRTIARLVEAPLAELILRGQLEEG 915 >UniRef50_C0SQM4 Putative ATP-dependent Clp protease n=1 Tax=Lactobacillus brevis RepID=C0SQM4_LACBR Length = 597 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 207/571 (36%), Positives = 333/571 (58%), Gaps = 37/571 (6%) Query: 169 MENFTTNLNQLAR--VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 +E + T+L +L + + G IGREKE+E + L R+RK+NPLL+GE GVGKTAI EG Sbjct: 5 IEKYATDLTRLVQNDLEGYQA-IGREKEIEELLVTLARKRKHNPLLIGEPGVGKTAIVEG 63 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFID 285 LA +IV +VPE + I+ +++ L+ G + F F+ L+ + D N ++FID Sbjct: 64 LAKKIVLQEVPERLQSAHIWVIELAGLMNGER---PFLGLFRDLIMAISHDCPNDLIFID 120 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 E+HTI+GAGA+ +DA N++KP L+ G I++IG+TT +EF + E D AL RRF+ + Sbjct: 121 ELHTIVGAGASGKQGLDAGNVLKPALARGDIQLIGATTIEEFHDYIEADGALTRRFEVLQ 180 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 + EP E T +I+ GL+ Y+ +H V+ T A+ V LA +YI DR +PDKA+D++DE+ Sbjct: 181 VAEPDTETTKKILYGLRLSYQTYHYVKITDDALNQIVTLANRYIPDRFMPDKALDILDES 240 Query: 406 GARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDK 465 A R ++ V + V+ R IP S+ + ++ + + ++ V GQD Sbjct: 241 CADTR----QRQLTEVTRERVAQVLERRTGIPMTSILRDRTQRIERITEIIQRRVKGQDA 296 Query: 466 AIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMS 522 A+ +++++ ++ AGL E +P+ SFLF G G GKTE+ LS+AL + ++R DMS Sbjct: 297 AVREVSDSVAVSFAGLEDERRPISSFLFLGTPGTGKTEMAKALSEALFDDEEAMIRLDMS 356 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 E+ E ++ RLIG D+ G+LT+ V P+AV+LLDEIEK V ++ LQ++ Sbjct: 357 EFAEENSAQRLIGTA------DKRGILTEQVKHQPYAVVLLDEIEKGDRSVQDLFLQILS 410 Query: 583 NGTLTDNNGRKADFRNVVLVMTTN-AG-----------VRETERKSIGLIHQDNSTDAME 630 +G + D+ GR F+N +++MTTN AG +T++K++ + N +A+ Sbjct: 411 DGIVHDHYGRPISFKNTIIIMTTNLAGAVINDEAEYNSASDTDQKALAF--EGNVENALH 468 Query: 631 EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWL 690 F PEF NR+++ + F L+ V+ ++ K++ EL +L +G +L Sbjct: 469 ---NYFRPEFVNRIEHKVVFQMLTESVVEKIARKYLQELTNKLAVRGYRFTYDDLVPKFL 525 Query: 691 AEKGYDRAMGARPMARVIQDNLKKPLANELL 721 A+ G++ GARP+A + + PLA LL Sbjct: 526 ADVGFNLKNGARPLAYMTHRKVTAPLARILL 556 >UniRef50_Q0SNE4 ATP-dependent Clp protease, subunit A n=22 Tax=Borrelia RepID=Q0SNE4_BORAP Length = 765 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 226/759 (29%), Positives = 374/759 (49%), Gaps = 49/759 (6%) Query: 13 AFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPAS 72 F E +H T EH+ L+ + +E L+ C++D L + LE F + P+ Sbjct: 14 TFLFFMESKHLVFTEEHIFYGLIKSDKVKELLDLCTIDFYKLNKHLEEFFGKL-PLRNNY 72 Query: 73 EEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRK-HEVSR 131 + + + ++ F+ + E VLV + S LL ++ Sbjct: 73 IPDYVSSIDYLYDDIISTLFFYKKPYKIQEKDLLWVLVK--KRKNSILDALLNSGFNLTI 130 Query: 132 LD----VVNFISHGTRKDEPTQSSDPGS--QPNSEEQAGG-------------------- 165 D V ++++ T+ D S G NS + GG Sbjct: 131 FDKLIEVHDYLAVNTKSDSGYGSELIGEYIHNNSPKSKGGFHIFDDNRDKPDQNNIFLEN 190 Query: 166 EERMENFTTNLNQLARVGGID----PLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 ++ + NF TN+ + +D PLIGR++EL R IQV+ R+ K+NP+L GE GVGKT Sbjct: 191 KDSIGNFLTNV-----IDALDLKQNPLIGRKQELSRLIQVILRKHKSNPILFGEPGVGKT 245 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI 281 + +GLA++I +VP+ + IYSLDIG L++GTKYRGD E R +L L + Sbjct: 246 VLIQGLAYKIKTENVPKDLIGYEIYSLDIGRLISGTKYRGDLESRMNRVLDFLNSRKKVM 305 Query: 282 LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 LFIDEIH I+GAGA S G +D +NL+KP+L+ GKI+ IG+TT E+ F KD+AL RRF Sbjct: 306 LFIDEIHMIVGAGATSFGSMDISNLLKPILTLGKIKFIGATTEYEYRKFFAKDKALMRRF 365 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 Q I++ EP+ E+T I+ +K YE HH+V YT +A++A + ++ KYI DR LPDKA D+ Sbjct: 366 QSIELKEPNFEDTYNILQEIKKDYERHHNVEYTDEAIQACIAMSQKYIKDRFLPDKAFDI 425 Query: 402 IDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF 461 +DE G++ +L + K+ + D+ ++ I + + + + L NL +R+K Sbjct: 426 LDELGSKFKLENI---KRIITKDDVCDLIKSIVGSNIFNFEEYNSELLINLENRIKKEFI 482 Query: 462 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDM 521 D + L IK+ + L +G F F G +G K ++T LS+ I +M Sbjct: 483 IHDSLVFDLILNIKLLKFNLLANRSTIGIFAFIGASGAEKCKLTDILSEEFKIPKFNLNM 542 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM 581 EY + ++ RLIG G+ + + K ++++ L + +K + V + L+ Sbjct: 543 GEYSDFTSLDRLIGPVLSNDGYYESTRFFKFLNKSSNSIIFLSDFDKCNKRVLDFFLEGF 602 Query: 582 DNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQ---DNSTDAMEEIKKIFTP 638 G L D G+K ++V++ NA E SIG ++ +N D + E K F Sbjct: 603 RTGKLFDGLGKKVSLSESLIVISVNA--ESNELNSIGFKNKMAGENDFDLILE--KRFPN 658 Query: 639 EFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRA 698 EF +D + F + +++ + L + + + +++ EK + Sbjct: 659 EFLELIDYVFVFKSIDELDFEKIIFNELNRFARMLRDRKFDVFFEKSVVDYIREKISGKG 718 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDK 737 G + + + I + K L +E+LF + + G++ + LDK Sbjct: 719 YGLKSVKKFIFKEVGKLLIDEILFKKIENSGKIKIYLDK 757 >UniRef50_B5RLQ8 ATP-dependent Clp protease, subunit A n=1 Tax=Borrelia duttonii Ly RepID=B5RLQ8_BORDL Length = 769 Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 216/754 (28%), Positives = 379/754 (50%), Gaps = 43/754 (5%) Query: 13 AFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPAS 72 +F E +H F T EH+ +L+S+ RE L C++D + + LE F + P+ A Sbjct: 21 SFLFFVERKHLFFTEEHIFYSLISDDEIRELLSLCALDFYSFNKILEEFFTKL-PIRNAD 79 Query: 73 EEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRL 132 + + +Q ++ ++ + E ++L + ++++ L K S L Sbjct: 80 FYDYFFKINDLYQEIIDTIFYYKKPYVLQE---KDLLWVLIRKRKNTILDALLKSGFS-L 135 Query: 133 DVVNFISH-----------GTRKDEPTQSSD--------PGSQPNSEEQAGGEER----- 168 D+ + I G K+E ++D G EE E+ Sbjct: 136 DIFDKIMEIYDYLGSNLDLGFLKNEKLLTNDLFNKGIDKYGGLNIFEEDYFKLEQDDDSL 195 Query: 169 -----MENFTTN-LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTA 222 +++F N ++ L +PLIGR+KEL IQ++ R+ K+NP++ GE GVGKT Sbjct: 196 DENNLVDDFLVNVIDNLDPNLATNPLIGRKKELYTLIQIMLRKHKSNPIVFGEPGVGKTI 255 Query: 223 IAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL 282 + +GLA+ I +G VP + DC +YSLDIG L++GT+YRGD E R LL L IL Sbjct: 256 LLQGLAYIIREGQVPHELIDCEVYSLDIGRLISGTRYRGDLENRVNKLLDFLHFKKKVIL 315 Query: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342 FIDEIH I+GAGA S +D +NL+KP+L+ GKI+ IG+TT E+ F KD+AL RRF Sbjct: 316 FIDEIHMIVGAGATSFSNIDVSNLLKPILTLGKIKFIGATTKNEYKKFFLKDKALLRRFH 375 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI 402 +++ EPS+E+T I+ G K +YE HH V YT +A+ A+ ++ KYI DR LPDKA D++ Sbjct: 376 GVELKEPSLEDTYHILKGAKEQYEKHHHVEYTDEAIWVAITMS-KYIKDRALPDKAFDLL 434 Query: 403 DEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG 462 D G++ +L KK + D+ V + + D+D L NL +++ + Sbjct: 435 DGLGSKFKL---EGNKKVITGDDVRDFVKYMVGTSIFNFDDYDQDLLMNLEHKIRTSMII 491 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMS 522 + + L IK+ R ++ +G F+ G + V K ++ LS+ L + L MS Sbjct: 492 DESILSELLLHIKLLRIKFFFKNSTLGIFILIGSSDVDKNKLACVLSEELNMPKLTLGMS 551 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 EY + ++RLIG G +D+ + + +++++L + +K+ V + + + Sbjct: 552 EYCDFDGINRLIGPVYGSEAYDEPTKFFRFLNESLNSIIVLSDFDKSSKRVIDFFFEGFN 611 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRN 642 G L DN GR ++++ N RE + G+ ++ + D ++K F+ +F + Sbjct: 612 TGRLFDNFGRSVSLSGSIIIIDINIEYRELD----GIGFKNETVDIRSLLEKRFSNKFLD 667 Query: 643 RLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 +D++ +F +S +V+ + + L + + L + + + Y+ +G R Sbjct: 668 LVDHVFFFRPVSKSDFKRVIIEEVNNFVKILKNEKIDLFFEEAVIGYFQKHIYENGLGIR 727 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 + +++ + L ++L+ + ++ + LD Sbjct: 728 GIRKIVIKEIGSLLIDDLILKKFKENDKIRIFLD 761 >UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepID=CLPB_CHLPN Length = 866 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 198/489 (40%), Positives = 284/489 (58%), Gaps = 44/489 (8%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSV-DLVALRQELEAFIEQTTP 67 +L AF A+ +H ++T HLLLALL N E+L + D+ L ++ Sbjct: 11 ALEKAFELAKSSKHTYVTENHLLLALLEN---TESLFYLVIKDIHGNPGLLNTAVKDALS 67 Query: 68 VLPAS-EEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRK 126 P E E D +P+ Q +L+ A ++ G ++G ++L+A +S + + Sbjct: 68 REPTVVEGEVDPKPSPGLQTLLRDAKQEAKTLGDEYISGDHLLLAFWSSNKEPFNSWKQT 127 Query: 127 HEVSRLDVVNFIS---HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 +VS D+ N I+ G R D P+ S+ + +E + NL LAR G Sbjct: 128 TKVSFKDLKNLITKIRRGNRMDSPSAESN-------------FQGLEKYCKNLTALAREG 174 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 +DP+IGR++E+ R IQVL RR KNNP+L+GE GVGKTAIAEGLA R++QGDVPE + Sbjct: 175 KLDPVIGRDEEIRRTIQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRLIQGDVPESLKGK 234 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQVD 302 +Y LD+G+L+AG KYRG+FE+R K++LK +E D I+FIDE+HT++GAGA G +D Sbjct: 235 QLYVLDMGALIAGAKYRGEFEERLKSVLKDVESGDGEHIIFIDEVHTLVGAGATDGA-MD 293 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 AANL+KP L+ G + IG+TT E+ EKD AL RRFQ I +TEPS+E+ V I+ GL+ Sbjct: 294 AANLLKPALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLR 353 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL----MPVSKRK 418 KYE H VR T A+ AAV L+ +YI DR LPDKAID+IDEA + R+ +P+ + Sbjct: 354 EKYEIFHGVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDE 413 Query: 419 KTVNVADIESVVARIARIPEKSVS-QSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K +A + +V + A E+S S Q + D ++ K+I+AL E + Sbjct: 414 KERELAAL--IVKQEAIKREQSPSYQEEADAMQ--------------KSIDALREELASL 457 Query: 478 RAGLGHEHK 486 R G E K Sbjct: 458 RLGWDEEKK 466 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 122/320 (38%), Positives = 193/320 (60%), Gaps = 7/320 (2%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VVA IP + + + + + L L + L+ V GQ A+ A++++I+ AR GL Sbjct: 536 IAQVVANWTGIPVQKMLEGEAEKLLILEESLEERVVGQPFAVSAVSDSIRAARVGLNDPQ 595 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+G FLF GPTGVGKTE+ L+ L + ++RFDMSEYME+H++S+LIG+ PGYVG Sbjct: 596 RPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMSEYMEKHSISKLIGSSPGYVG 655 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 +++GG L++A+ + P++V+L DEIEKA +V NILLQV D+G LTD RK + +N + + Sbjct: 656 YEEGGSLSEALRRRPYSVVLFDEIEKADKEVLNILLQVFDDGILTDGKKRKVNCKNALFI 715 Query: 603 MTTNAGVRE----TERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 MT+N G E +K L + + +K+ +PEF NR+D I+ F L+ + I Sbjct: 716 MTSNIGSPELADYCSKKGSELTKEAILSVVSPVLKRYLSPEFMNRIDEILPFVPLTKEDI 775 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 ++V + + +L + ++L +L+E+GYD A GARP+ R+IQ + L+ Sbjct: 776 VKIVGIQMRRIAQRLKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSK 835 Query: 719 ELLFGSLVDGGQVTVALDKE 738 LL G + + + + KE Sbjct: 836 ALLKGDIKPDTSIELTMAKE 855 >UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PG59_CHIPD Length = 816 Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 243/811 (29%), Positives = 390/811 (48%), Gaps = 100/811 (12%) Query: 5 ELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQELEAFIE 63 E++ ++ +A A A+EH H T HLLLA L L+A ++D L + E ++ Sbjct: 12 EVQSAIRIAQALAKEHHHANYTPAHLLLACLHKEVGITPQLQAMNIDTYYLEEWAEVRLD 71 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 + P E+ D + VLQ A + VLVAI + + Sbjct: 72 -SVPKAGRLPEQPDADEYAA--NVLQEADAVRLEYDLDAADAWCVLVAISTPGVGFSFEQ 128 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 L+ + R +SH +KD G+ P + G+ + + L R+ Sbjct: 129 LKTFPLQR---AQLLSHFNKKD------SNGAAPKTT-IVTGKSVAQKYIYKLTDPQRLQ 178 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 L GR+ E+ +++L R+ +++ L+ GE GVGKTA+A+ LA I+Q P + Sbjct: 179 AKHALAGRDAEVRTMMEILTRKGRSSILITGEGGVGKTALADALASAILQKQAPLQLQQT 238 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 IY+LD G+ +AG Y+ + E R + ++ QL++ +LFID +HT++ S G + Sbjct: 239 DIYALDYGAFIAGAAYKNELEDRLQQIMSQLQEAGRHVLFIDNLHTLLDKQPGSAGGI-- 296 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEK----------------DRALARR------- 340 N++K ++ G I +I ++T + F + E D A A R Sbjct: 297 GNVLKAAMNKGDITLIATSTPEGFRKLIEPDGLLRHCFEVVQLAEPDEATAARMIQAVMP 356 Query: 341 ----FQKIDITEPSIEETVQI-----------------------------------INGL 361 + + + I E +++ ++ L Sbjct: 357 DYESYYNLKVAPEVISEAIKLSRRYLKERSLPDSAVNLLDRTLAAIRTTQDTGKITLDDL 416 Query: 362 KPKYEAHHDVRYTAKA-VRAAVELAVKYINDRHLPDKAIDVIDEAGAR--------ARLM 412 K K EA D R + + ++ + R P + I ID A A+L Sbjct: 417 KAKLEAAGDSREELRWWYQQCMQRYSALVTTRLQPQQDIYKIDNEAALKTALLDIIAQLE 476 Query: 413 P-VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 P V + V D+ +++A IP + +R+ L N+ L+ V GQD A++ ++ Sbjct: 477 PLVETQHVAVTGIDLATMIAESTGIPLGKIQSGERERLVNMDLELRKRVVGQDHALKTVS 536 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERH 528 EAI +R+GL +P+GSF F GPTG GKTE+ L+ L + ++RFDMSE+ E H Sbjct: 537 EAILESRSGLSRPGQPIGSFFFLGPTGTGKTELAKSLADFLFQDERCMIRFDMSEFKEEH 596 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 + + L GAPPGYVG+++GGLL + + + P+AV+L DEIEKAHP VF+I LQ+MD G L D Sbjct: 597 SAALLYGAPPGYVGYEEGGLLVNKIRQQPYAVVLFDEIEKAHPSVFDIFLQIMDEGKLHD 656 Query: 589 NNGRKADFRNVVLVMTTNAG---VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLD 645 G+ DF N +++ T+N G + ++ R+ G+I S ME + + F PEF RL Sbjct: 657 RLGKTGDFSNALILFTSNIGSDVIAQSFRQ--GVI--PASQQLMEIMARNFRPEFLGRLT 712 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 I+ F + + + ++ D + L L Q+ ++L+VS AR LA +GY GARP+ Sbjct: 713 EIVPFGPIQQENVVKIFDIHLKHLLQLLTQQQITLDVSVAAREKLAAEGYSPLYGARPLK 772 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 VI+ L+KPL+ ++ GSL TV LD Sbjct: 773 EVIRSRLRKPLSRMIIEGSLQP--HTTVKLD 801 >UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HLYB_TREHY Length = 828 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 174/413 (42%), Positives = 260/413 (62%), Gaps = 29/413 (7%) Query: 17 AREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEAFI--EQTTPVLPAS 72 A+ H+ +T EH+LL LL S A L +DL L+ ELE+ + TT V Sbjct: 22 AKRLNHDMVTPEHILLGLLYESEALATRVLMRLKIDLDRLKLELESAMVKSSTTKVF--- 78 Query: 73 EEERDTQPTLS-FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSR 131 T PT Q+++ R+ ++ N + ++L+ + E ES AY + Sbjct: 79 ----GTLPTAPRVQKLISRSAEEARALSHNYIGTEHLLLGLLRE-ESGTAYNVLTSMGLE 133 Query: 132 LDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER--------MENFTTNLNQLARVG 183 L ++ R++ GS +S EQ E+ ++ F +L ++AR Sbjct: 134 LTIL-------RQEILKMLGVAGSNISSMEQTSQEDNVKKVKTPTLDQFARDLTKMARDK 186 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 +D +IGRE E+ R +Q+L RR+KNNP+L+GE GVGKTAI EGLA +IV DVP+++ Sbjct: 187 ALDRVIGRENEVMRVVQILSRRKKNNPILLGEPGVGKTAIVEGLAEKIVAADVPDILLKK 246 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 + +LD+ S++AGTKYRG+FE+R K ++ ++++ +N I+FIDE+HT+IGAG A G +DA Sbjct: 247 RVLTLDLSSVVAGTKYRGEFEERIKNIVLEIKKASNIIIFIDELHTLIGAGGAEGA-LDA 305 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP 363 AN++KP LS G+I+ IG+TT E+ EKD AL RRFQ I++ EPSIE+T++I+NG+K Sbjct: 306 ANMLKPALSRGEIQCIGATTINEYKKYIEKDGALVRRFQPINVEEPSIEDTIEILNGIKG 365 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 KYE HH V+YT +A+ AA L+ +YI +RHLPDKAID+IDEAG+RARL+ +++ Sbjct: 366 KYEEHHKVKYTDEAINAAAVLSKRYIFERHLPDKAIDLIDEAGSRARLLNMTR 418 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 219/338 (64%), Gaps = 13/338 (3%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI V++ I IP K + S+ L + + L V GQ +AI ++++AI+ +RAGL Sbjct: 484 DIRHVISEITNIPIKRLLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRRSRAGLKTS 543 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYV 541 +P+GSF+F GPTGVGKT + LS+ + L+R DMSE+ME+ VSRLIGAPPGYV Sbjct: 544 KRPLGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGAPPGYV 603 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+++GG LT+ V + P++++L DEIEKAHPDV NILLQV++ G LTDN GRK DF N ++ Sbjct: 604 GYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNFGRKVDFSNTII 663 Query: 602 VMTTNAGVRETER-KSIGLIHQDNSTD-------AMEEIKKIFTPEFRNRLDNIIWFDHL 653 ++T+N G R+ + S+G + D A+EE+K+ F PEF NR+D+II F L Sbjct: 664 IITSNLGARDIVKGSSLGFNAVGSEKDANDIKNFALEELKQNFNPEFLNRIDDIIVFHTL 723 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 S + + +++ + EL + ++ + + +S+EA+N++ +KG+D+ GAR + R IQ ++ Sbjct: 724 SKEDLKDIINIMLKELNEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQKEIE 783 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 ++ E+LFG++ DG T+ +D+ L + + + K Sbjct: 784 DYVSTEILFGNIEDGD--TINVDRNDGSLIFSYDKSVK 819 >UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA Length = 905 Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 170/388 (43%), Positives = 249/388 (64%), Gaps = 19/388 (4%) Query: 29 HLLLALL--SNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQ- 85 HLL A+L N AR +EA + Q + A + Q LP++ TQP +S Q Sbjct: 32 HLLDAMLRQENSMARALIEAAGGNA----QNVSAEVHQAMQSLPSASGSTTTQPDVSRQL 87 Query: 86 -RVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRK 144 VL +A +Q G VT +LVAI + + +Q+A +L K+ ++ + N ++ Sbjct: 88 SAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKPNQSADILEKNGLTADKLRNALTAARGS 147 Query: 145 DEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCR 204 D S+D G + +E ++T+L A+ G +DP+IGR++E+ R IQ+L R Sbjct: 148 DRKVTSADA---------EGSYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSR 198 Query: 205 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 R KNNP+L+GE GVGKTA+ EGLA RIV GDVP + + + SLD+GS++AG+KYRG+FE Sbjct: 199 RTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFE 258 Query: 265 KRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTT 323 +R K++L+++++ D I FIDEIHTI+GAGAA G +DA N++KP+L+ G++R+IG+TT Sbjct: 259 ERLKSVLEEIKKADGQIITFIDEIHTIVGAGAAEG-SMDAGNMLKPMLARGELRLIGATT 317 Query: 324 YQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVE 383 E+ EKD AL RRFQ++ + EPS+E+TV I+ G+ PKYEAHH V A+ AA Sbjct: 318 LDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGIAPKYEAHHKVTIGDDALVAAAT 377 Query: 384 LAVKYINDRHLPDKAIDVIDEAGARARL 411 L+ +YI+ R LPDKAID++DEA A R+ Sbjct: 378 LSNRYISGRQLPDKAIDLVDEAAAHLRM 405 Score = 261 bits (667), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 139/339 (41%), Positives = 212/339 (62%), Gaps = 20/339 (5%) Query: 403 DEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG 462 D A A ++P V+ I +V+ IP + Q + + L ++ + L V G Sbjct: 542 DNANADVPMVP-----DRVDADSIAEIVSDWTGIPVGRLMQGENEKLLHMEEYLGKRVIG 596 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRF 519 Q +AI+A+++A++ +RAG+ ++P GSFLF GPTGVGKTE+ L+ L + ++R Sbjct: 597 QKEAIQAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRI 656 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DMSEYME+ +VSRLIGA PGY+G+++GG LT+AV + P++V+L DE+EKA+P+VF++LLQ Sbjct: 657 DMSEYMEKASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQ 716 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA-----MEEIKK 634 V+D+G LTD GR DF+N +L+MT+N G S L++ D DA M+ + Sbjct: 717 VLDDGRLTDGQGRTVDFKNTILIMTSNLG-------SQFLVNPDMDADAKKKAVMDAVHM 769 Query: 635 IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKG 694 F PEF NRLD ++ F L+ + + +VD + ++ +L + ++L+V+ AR WLA G Sbjct: 770 QFKPEFINRLDELVMFHPLTREELGGIVDIQVAQVSARLTDRRITLDVTDSAREWLANTG 829 Query: 695 YDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 YD A GARP+ R++Q + LA LL G + DG V V Sbjct: 830 YDPAYGARPLRRLVQTEVGDQLARMLLAGEVHDGDTVLV 868 >UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular organisms RepID=CLPB1_SYNY3 Length = 898 Score = 299 bits (765), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 174/415 (41%), Positives = 253/415 (60%), Gaps = 22/415 (5%) Query: 17 AREHRHEFMTVEHLLLALLSNPSAREA--LEACSVDLVALRQELEAFIEQTTPVLPASEE 74 AR +++ + VEH+LLALL A + +VD LRQ+LE F + P Sbjct: 24 ARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDGEGLRQQLEIFTNRQ----PKQAY 79 Query: 75 ERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDV 134 S +L RA +SS ++ L+ F+E + LR + D+ Sbjct: 80 VEQLYLGRSLDVMLDRA-DAARSSWEDKFISVEHLLVGFAEDDRVGRKTLRAFNLDPQDL 138 Query: 135 VNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKE 194 I + + S ++PN EE+ E ++ + +L + AR G +DP+IGR++E Sbjct: 139 ELAI-------KAIRGSQKVTEPNQEEKY---EALDKYGRDLTEQARQGKLDPVIGRDEE 188 Query: 195 LERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 + R IQVL RR KNNP+L+GE GVGKTAIAEGLA RI+ GDVPE + + + SLD+GSL+ Sbjct: 189 IRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPESLKNRQLISLDMGSLI 248 Query: 255 AGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASG-GQVDAANLIKPLLS 312 AG KYRG+FE+R ++++K++ D ILFIDE+HT++GAG G G +DA NL+KP+L+ Sbjct: 249 AGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAGNLLKPMLA 308 Query: 313 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVR 372 G++R IG+TT E+ EKD AL RRFQ++ + +PS+++T+ I+ GLK KYE HH V+ Sbjct: 309 RGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISILRGLKEKYEVHHGVK 368 Query: 373 YTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIE 427 T A+ AA L+ +YI DR LPDKAID++DEA AR ++ S K V + DI+ Sbjct: 369 ITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLKMEITS---KPVELEDID 420 Score = 265 bits (677), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 206/324 (63%), Gaps = 12/324 (3%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 ++ V +DI +VA IP + +++R L L L V GQ +A+ A++ AI+ A Sbjct: 543 REQVTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRA 602 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 RAG+ +P+GSFLF GPTGVGKTE+ L+ L ++R DMSEYME+H VSRLI Sbjct: 603 RAGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSRLI 662 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++GG L++AV + P++V+LLDE+EKAH DVFNILLQV+D+G +TD+ GR Sbjct: 663 GAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGRVV 722 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE-----IKKIFTPEFRNRLDNIIW 649 DFRN ++VMT+N G + L D D M++ ++K F PEF NR+D++I Sbjct: 723 DFRNTIIVMTSNIGSDHI----LSLSADDADYDKMQKQVLQSLRKHFRPEFLNRIDDLII 778 Query: 650 FDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 F L D + ++V I ++ LD++ ++L +S A + + GYD GARP+ R IQ Sbjct: 779 FHTLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQ 838 Query: 710 DNLKKPLANELLFGSLVDGGQVTV 733 L+ P+A ++L + V G ++ + Sbjct: 839 RQLENPIATKILENTFVAGDKILI 862 >UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HM97_VITVI Length = 875 Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 163/403 (40%), Positives = 251/403 (62%), Gaps = 18/403 (4%) Query: 17 AREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEE 74 A+E++H+ + EHL+ ALL N AR VD L + FI++ V+ E Sbjct: 101 AKENKHQIVETEHLMKALLEQKNGLARRIFSKAGVDNTRLLDATDKFIQRQPKVIG---E 157 Query: 75 ERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDV 134 + + ++QRA + + G + V+ ++++A F + + L + ++S+ + Sbjct: 158 SAGSMLGRDLESLIQRAREYKKEYGDSFVSVEHLVLA-FVQDQRFGKQLFKDFQISQKAL 216 Query: 135 VNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKE 194 + I R + DP G E +E + +L +A+ G +DP+IGR+ E Sbjct: 217 KSAI-EAIRGRQQVIDQDP---------EGKYEALEKYGKDLTAMAKAGKLDPVIGRDDE 266 Query: 195 LERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 + R IQ+L RR KNNP+L+GE GVGKTAI+EGLA RIVQGDVP+ + + + SLD+G+L+ Sbjct: 267 IRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRKLISLDMGALI 326 Query: 255 AGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS 313 AG K+RG+FE R KA+LK++ E D +ILFIDEIHT++GAGA +G +DA NL+KP+L Sbjct: 327 AGAKFRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGATNGA-MDAGNLLKPMLGR 385 Query: 314 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 G++R IG+TT E+ EKD AL RRFQ++ + +P++E+T+ I+ GL+ +YE HH VR Sbjct: 386 GELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILRGLRERYELHHGVRI 445 Query: 374 TAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 + A+ A L+ +YI+ R LPDKAID++DEA A+ ++ SK Sbjct: 446 SDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSK 488 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 102/271 (37%), Positives = 142/271 (52%), Gaps = 46/271 (16%) Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 L H+P+ SF+F GPTGVGKTE L+KAL + F+ E +E Sbjct: 626 LSDPHRPIASFMFMGPTGVGKTE----LAKALASYM--FNTEEALE-------------- 665 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 GG LT+ V + P+AV+L DEIEKAH DVFN+ LQ++D+G +TD+ GR F N V Sbjct: 666 -----GGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTV 720 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 ++MT+N V M+ + IF PEF NR+D I F L D I Sbjct: 721 IIMTSNQRV-------------------MDAARSIFRPEFMNRVDEYIVFQPLDRDQISS 761 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +V + +Q++L + + L+V++ A L GYD GARP+ RVIQ N++ LA + Sbjct: 762 IVKLQLERVQLRLADRKMKLQVTETAIQLLGSLGYDPNYGARPVKRVIQQNVENELAKGI 821 Query: 721 LFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 L G D + TV +D E + G QK Sbjct: 822 LRGEFKD--EDTVLIDTEVTAFSNGQLPQQK 850 >UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organisms RepID=CLPB_CHLCV Length = 864 Score = 295 bits (755), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 175/424 (41%), Positives = 257/424 (60%), Gaps = 31/424 (7%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSV-DLVALRQELEAFIEQTTP 67 +L AF A+ ++ +++ H L LL N E+L + D+ + L + +++ Sbjct: 11 ALEKAFELAQSAKNPYVSENHFLKCLLEN---TESLFYLIIKDIHNNPKLLTSAVDEALS 67 Query: 68 VLPAS-EEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRK 126 + P+ E +P+ Q +L A + G ++G +VL+A + + A + Sbjct: 68 LEPSVIEGSAMPKPSPGLQSLLLDAKQEAKDLGDEYLSGDHVLLAFWKSNKEPFASWKKT 127 Query: 127 HEVSRLD----VVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 ++S D ++N I G R D P+ +E G +E + NL LA+ Sbjct: 128 VKISLDDLKKLIIN-IRRGNRMDSPS----------AENNLRG---LEKYCKNLTLLAKE 173 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 G +DP+IGR++E+ R +QVL RR KNNP+L+GE GVGKTAIAEGLA RIVQGD+PE + Sbjct: 174 GKLDPVIGRDEEIRRTVQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRIVQGDIPESLKG 233 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQV 301 +Y LD+G+L+AG KYRG+FE+R K++LK +E D SILFIDE+HT++GAGA G + Sbjct: 234 KQLYVLDMGALIAGAKYRGEFEERLKSVLKDVESVDGESILFIDEVHTLVGAGATDGA-M 292 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DAANL+KP L+ G + IG+TT E+ EKD AL RRFQ I +TEPS+E+ V I+ GL Sbjct: 293 DAANLLKPALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGL 352 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL------MPVS 415 + KYE H VR T A+ AAV L+ +YI DR LPDKAID+IDEA + R+ +P+ Sbjct: 353 REKYEIFHGVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPLPID 412 Query: 416 KRKK 419 ++++ Sbjct: 413 EKER 416 Score = 224 bits (572), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 125/320 (39%), Positives = 200/320 (62%), Gaps = 7/320 (2%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VVA IP + + + + + L L + L+ V GQ AI A++++I+ AR GL Sbjct: 536 IAQVVANWTGIPIQKMLEGEAEKLLVLEESLEERVVGQPFAISAVSDSIRAARVGLSDPQ 595 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+G FLF GPTGVGKTE+ L+ L + ++RFDM+EYME+H+VS+LIG+PPGYVG Sbjct: 596 RPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMTEYMEKHSVSKLIGSPPGYVG 655 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 +++GG L++A+ + P++V+L DEIEKA +VFNILLQ+ D G LTD+ RK + +N + + Sbjct: 656 YEEGGSLSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDEGILTDSKKRKVNCKNALFI 715 Query: 603 MTTNAGVRE----TERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 MT+N G +E +K + + + +KK F+PEF NR+D+I+ F L+T+ I Sbjct: 716 MTSNIGSQELADYCAKKGSRVSKETVLSVVAPTLKKYFSPEFINRIDDILPFVPLNTEDI 775 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 ++V + + +L ++ V+L +L+E+GYD + GARP+ R+IQ + L+ Sbjct: 776 VKIVGIQMRRVAQRLLERRVTLTWDDSVILYLSEQGYDSSFGARPLKRLIQQKVVTLLSK 835 Query: 719 ELLFGSLVDGGQVTVALDKE 738 LL G + + + + K+ Sbjct: 836 ALLKGDIKSDTSIELTMSKD 855 >UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organisms RepID=CLPB_CORDI Length = 849 Score = 294 bits (753), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 174/410 (42%), Positives = 244/410 (59%), Gaps = 24/410 (5%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTT 66 +L A +A + + EHLL A+L A L A VD +R+E EA + + Sbjct: 13 ALQEALQKASAAGNPDIRPEHLLAAILGQEDGIAIPVLRATGVDPDVVRREAEALVAK-- 70 Query: 67 PVLPASEEERDTQPTLSFQR----VLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 LP +E P +F R VL A G +E VL+A + + AA Sbjct: 71 --LPKAEGANLANP--NFNRDALSVLNNAQELAGELG-DEYVSTEVLLAAVARGTNDAAE 125 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 LL K + DV+ + R ++ + P Q + +E ++T+L AR Sbjct: 126 LLTKRGAT-YDVIKGVFPSVRGNKKVTTESPEDQFQA---------LEKYSTDLTARARE 175 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 G IDP+IGR++E+ R +QVL RR KNNP+L+GE GVGKTAI EGLA RIV GDVPE + Sbjct: 176 GKIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKG 235 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL-FIDEIHTIIGAGAASGGQV 301 T+ SLD+GS++AG KYRG+FE+R KA+L +++ I+ FIDE+HTI+GAGA + Sbjct: 236 KTLISLDLGSMVAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAM 295 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DA N+IKPLL+ G++R++G+TT E+ EKD AL RRFQ++ + EPS+E+ V I+ GL Sbjct: 296 DAGNMIKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAVGILRGL 355 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 K +YE HH VR A+ AA L+ +YI R LPDKAID++DEA +R R+ Sbjct: 356 KERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRM 405 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 144/320 (45%), Positives = 208/320 (65%), Gaps = 15/320 (4%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VV+ IP + Q + + L N+ L V GQ +A+ A+++A++ ARAG+ + Sbjct: 537 IAEVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVADPN 596 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P GSFLF GPTGVGKTE+ L++ + + ++R DMSEY E+H V+RL+GAPPGYVG Sbjct: 597 RPTGSFLFLGPTGVGKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARLVGAPPGYVG 656 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 +DQGG LT+AV + P+ V+L DE+EKAHPDVF+ILLQV+D G LTD GR DFRN VL+ Sbjct: 657 YDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTVLI 716 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 662 +T+N G T+ + M+ +K+ F PEF NRLD+++ FD LS + + +V Sbjct: 717 LTSNLGAGGTK------------DEMMDAVKRAFKPEFVNRLDDVVIFDPLSQEQLTHIV 764 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 + I +L +L + ++L VS A+ WLAE+GY+ A GARP+ R+IQ + LA +LL Sbjct: 765 EIQIAQLAQRLAARRLTLAVSDSAKLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKLLS 824 Query: 723 GSLVDGGQVTVALDKEKNEL 742 G + DG +V V D + + L Sbjct: 825 GEVRDGSEVHVDADLDNDGL 844 >UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic n=62 Tax=cellular organisms RepID=CLPAA_SOLLC Length = 926 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 170/413 (41%), Positives = 249/413 (60%), Gaps = 34/413 (8%) Query: 12 MAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE-------AFI 62 +A AR H F+ E +LL L+ + A + L++ ++L R E+E FI Sbjct: 107 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFI 166 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 P P + +RVL+ ++ + G N + ++L+ + E E AA Sbjct: 167 AVEIPFTPRA------------KRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR 214 Query: 123 LLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 +L R V+ + + E +S G + +E + TNL + Sbjct: 215 VLENLGADPTNIRTQVIRMVGESS---EAVGASVGGGTSGLKMPT-----LEEYGTNLTK 266 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 LA G +DP++GR+ ++ER Q+L RR KNNP L+GE GVGKTAIAEGLA RI GDVPE Sbjct: 267 LAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPE 326 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + +LD+G L+AGTKYRG+FE+R K L+++++Q ILFIDE+HT+IGAGAA G Sbjct: 327 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG 386 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DAAN++KP L+ G+++ IG+TT E+ EKD AL RRFQ + + EPS++ET+QI+ Sbjct: 387 A-IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQIL 445 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 GL+ +YE HH + YT +A+ AA +L+ +YI+DR LPDKAID+IDEAG+R RL Sbjct: 446 KGLRERYEIHHKLHYTDEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRL 498 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 140/334 (41%), Positives = 219/334 (65%), Gaps = 14/334 (4%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V ADI+ +V+ IP + VS + D L + + L V GQD+A++A++ AI+ AR G Sbjct: 572 VTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISRAIRRARVG 631 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA-LGIE--LLRFDMSEYMERHTVSRLIGAP 537 L + ++P+ SF+F+GPTGVGK+E+ L+ G E ++R DMSE+MERHTVS+LIG+P Sbjct: 632 LKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 691 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ +GG LT+AV + P+ V+L DEIEKAHPDVFN++LQ++++G LTD+ GR DF+ Sbjct: 692 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 751 Query: 598 NVVLVMTTNAGVRETER--KSIG----LIHQDNSTDAM-----EEIKKIFTPEFRNRLDN 646 N +L+MT+N G E+ + IG +D+S + + EE+K+ F PEF NRL Sbjct: 752 NTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSE 811 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 +I F L+ + ++ D + E+ V+L K + L+V++ R+ + ++GY+ + GARP+ R Sbjct: 812 MIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRR 871 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 I L+ +A ++L G + +G V V +D + N Sbjct: 872 AIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGN 905 >UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E9C6_9ACTN Length = 880 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 171/419 (40%), Positives = 248/419 (59%), Gaps = 34/419 (8%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTP 67 ++MA A + + EHLLLAL A EAL + + + L+ QTT Sbjct: 13 MSMAKQEALDLHSNKVGTEHLLLALAKEDEGIAAEALRSLDISYDDIMDTLKEV--QTTV 70 Query: 68 VLPASEEERDTQPTLSFQ----RVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 P+ E E L+F V++R+ + + + V+ ++L+ I E A + Sbjct: 71 PEPSEETE---AAKLAFTPLVISVMERSFRVARENNQTYVSTEHLLIGIVEEGNGMAMDI 127 Query: 124 LRKHEVSRLDVVNFISHGTRKDE------------------PTQSSDPGSQPNSEEQAGG 165 L + VS + I T KD+ P S SQ ++ G Sbjct: 128 LMRLGVSSASIKKAIEKLTAKDQDKKRPLAGAGAGRPGAGLPFFSGSDASQ----QKGSG 183 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 E ++ F TNL Q AR G +DP+IGREKE++R +++L RR KNNPL++G+ GVGKTAI E Sbjct: 184 TETLKQFATNLTQKARDGELDPVIGREKEVQRMMEILSRRTKNNPLILGDPGVGKTAIVE 243 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFID 285 GLA +I G+VPE + + I++LD+ L+AG KYRG+FE+R K ++++ + + ILFID Sbjct: 244 GLAQQIAAGNVPENLMNQNIWTLDLPGLVAGAKYRGEFEERLKNVIQEATEADDVILFID 303 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 E+HTIIGAG+A G +DA++++KP+L+ G ++IG+TT +EF KD A RRFQ ID Sbjct: 304 EMHTIIGAGSAE-GSIDASSMLKPVLARGAFQIIGATTAEEFRKYLTKDPAFERRFQTID 362 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EPS+E+TV+I+ LKP+YE HH VRYT A+ AA L+ +YI DR LPDKAID+IDE Sbjct: 363 VEEPSVEDTVKILTALKPRYEEHHHVRYTQGAIEAAANLSNRYIQDRFLPDKAIDLIDE 421 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/338 (39%), Positives = 209/338 (61%), Gaps = 12/338 (3%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 T++V+ I +V+ + +P S+++S+ L LK + GQD+A+EA+ +A++ +R+ Sbjct: 494 TIDVSQIADIVSVTSGVPVSSLTESESRRLLQAESVLKTRIIGQDEAVEAVAKAVRRSRS 553 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGA 536 L +P GSF+F GPTG GKTE+ L++ L L+ FDMSE+ VS+LIG+ Sbjct: 554 PLKDPRRPGGSFIFLGPTGTGKTELAKTLAEYLFGSKDALISFDMSEFGSEFEVSKLIGS 613 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG D+GG LT AV +HP++V+L DEIEKAHPD+FNILLQV++ G LTD+ G+ DF Sbjct: 614 PPGYVGHDEGGQLTKAVRRHPYSVVLFDEIEKAHPDIFNILLQVLEEGRLTDSQGKTVDF 673 Query: 597 RNVVLVMTTNAGVRETERKSI---------GLIHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 RN V++MT+N G RE + + GL + AM E+K++F PE NR+D+I Sbjct: 674 RNTVIIMTSNVGAREIAQDASVGFGTTGEQGLTSSEIKGRAMGELKRLFRPELLNRIDDI 733 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 + F LS + + ++ + +L+ +L G++++++ A + + +G D GARP+ R Sbjct: 734 VVFQKLSGENLTKIAHLLVDDLRQRLIANGMNIKLTDAAYDKIVAEGTDLTNGARPLRRA 793 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 IQ ++ PL+ ELL G +G V + K ++G Sbjct: 794 IQKLIEDPLSEELLAGEWGEGDTVLCDVADGKFVFSHG 831 >UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms RepID=Q93ZM4_ARATH Length = 558 Score = 291 bits (745), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 135/243 (55%), Positives = 186/243 (76%), Gaps = 1/243 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +E + TNL +LA G +DP++GR+ ++ER +Q+L RR KNNP L+GE GVGKTAIAEGLA Sbjct: 278 LEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLA 337 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RI GDVPE + T+ +LD+G L+AGTKYRG+FE+R K L++++ Q ILFIDE+H Sbjct: 338 QRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVH 397 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 T+IGAGAA G +DAAN++KP L+ G+++ IG+TT E+ EKD AL RRFQ + + E Sbjct: 398 TLIGAGAAEGA-IDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPE 456 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 P++E +QI+ GL+ +YE HH +RYT +A+ AA +L+ +YI+DR LPDKAID+IDEAG+R Sbjct: 457 PTVEGAIQILQGLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSR 516 Query: 409 ARL 411 RL Sbjct: 517 VRL 519 >UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococcus warneri L37603 RepID=C4W7H5_STAWA Length = 882 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 200/644 (31%), Positives = 327/644 (50%), Gaps = 90/644 (13%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +E+ + N+ AR I P+I REKE+ L RR KNN L+G+ GVGK+AI EGLA Sbjct: 241 LEDISINITDKARNEEILPVINREKEIHHLEIALSRRDKNNVALIGKGGVGKSAIVEGLA 300 Query: 229 WRIVQGDVPEVMADCTI-YSL-DIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDE 286 +IV ++P ++ + +S+ D+ S++ G +RG + + +++ + + ILF+DE Sbjct: 301 LKIVNKEIPSLINKKILQFSMNDLISVIQGDTFRG-----IQRFMSEMKSEKDVILFVDE 355 Query: 287 IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 IH + G G +++KP ++ R+IG+TT E+ N D AL RRF+ ++I Sbjct: 356 IHML---GKYKG----ITDILKPAMARNDFRIIGATTPSEWQNYISSDIALTRRFEIVNI 408 Query: 347 TEPSIE-----------------------ETVQIINGLKPKY---EAHHDVRYTAKAVRA 380 EP++E ET+++ L KY E D+ +T Sbjct: 409 NEPTVEDTIEIINEAISVYENFHQVNFEEETIELAVKLGKKYFQKEQLPDLAFTILDNAG 468 Query: 381 AV----------------------ELAVKYINDRHLPDKAIDVIDE-------------A 405 A+ +L +K D+ ID I + Sbjct: 469 AICRIERGQFTNIQLNYEDKMNDLKLTLKQAQSIEFNDQQIDEIRKEIKQLEKEYARNIT 528 Query: 406 GARARLMPVSKRKKTVNVADIESVVARIARIP---EKSVSQSDRDTLKNLGDRLKMLVFG 462 ++ + P++ K+ + A + + I + ++ S + + L++L +K + G Sbjct: 529 SSKKMVFPINVTKEHIKKAIEQKLGESIDGLEFQGDEQFSDIELNRLRSLKAVMKSQIIG 588 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRF 519 QD AI + A+ + G + PVG F+ G TGVGKTE L++ L + ++RF Sbjct: 589 QDDAINTIANAVIRKKLGFKQHNHPVGVFMLLGTTGVGKTETAKILNRTLYKDESNIIRF 648 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DMSEY + H VS+LIG PPGYVG+ + G L V++HP+AV+L DE+EKAHP +F+ILLQ Sbjct: 649 DMSEYQKDHEVSKLIGPPPGYVGYGRDGDLVKTVLEHPNAVILFDEVEKAHPKIFDILLQ 708 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET-ERKSIGLIHQDNS-TDAM---EEIK- 633 V D+ LT++ G A+F ++++T+N G + +K IGL Q+N TD + E IK Sbjct: 709 VFDDARLTNSLGEVANFSECIILLTSNIGTSDIRHKKVIGLNQQNNDETDFVTVDESIKN 768 Query: 634 ---KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWL 690 F PEF NR+D I F L I ++ + + + + ++ G ++E S A + Sbjct: 769 ALNNYFRPEFLNRIDEFITFKPLDQQEIFEITNLLLEKEKTLVESLGYNIEFSSSAMRLI 828 Query: 691 AEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 A+ Y+ GARP+ R I L+ L++E++ G+L G + V Sbjct: 829 AKLCYEPKNGARPIKRGISKLLEDRLSDEIINGTLQKGDNIEVT 872 >UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CLPB_DEIRA Length = 852 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 148/319 (46%), Positives = 221/319 (69%), Gaps = 8/319 (2%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V DI +VV+R IP + + +R+ L +L ++L V GQD+AI ++++AI+ ARAG Sbjct: 521 VTEEDIAAVVSRWTGIPVSKLMEGEREKLLHLEEQLHGRVIGQDRAIVSVSDAIRRARAG 580 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAP 537 L ++P+GSF+F GP+GVGKTE+ L++ L ++R DMSEYME+HTV+RLIGAP Sbjct: 581 LNDPNRPLGSFMFLGPSGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHTVARLIGAP 640 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVGF++GG LT+AV + P+AV+L DEIEKAHPDVFN+LLQV+D+G LTD GR DFR Sbjct: 641 PGYVGFEEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 700 Query: 598 NVVLVMTTNAG---VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 N +++MT+N G + E +++ G + + M+E++ F PEF NR+D+II FD L+ Sbjct: 701 NTLIIMTSNIGSPLILEMQQR--GEDAETIKSAVMDELRGEFRPEFLNRVDDIIVFDALT 758 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + +VD + L+ +L ++ ++L ++++A++ LAE GYD A GARP+ R I ++ Sbjct: 759 AKDLQSIVDIQLGGLRRRLAERRITLHLTEDAKDKLAELGYDPAYGARPLRRTISQYIET 818 Query: 715 PLANELLFGSLVDGGQVTV 733 PLA E+L G + DG + V Sbjct: 819 PLAREILGGQIQDGSVLNV 837 Score = 281 bits (718), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 183/457 (40%), Positives = 267/457 (58%), Gaps = 30/457 (6%) Query: 8 LSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTP 67 +++N A A+E+ ++ +T H+L LL N +A AL DL R L+A I + P Sbjct: 12 VAINAAQQLAQENHNQNLTHFHVLRTLLDNDTASRALTLAGGDLNTARAALDAEIAKL-P 70 Query: 68 VLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKH 127 + S+ + P L+ R Q+A G + V +L+A+ E + Sbjct: 71 KVQGSDGQLYLDPALN--RAFQKADTLAAQLGDSFVAADTLLLALRGEYRGRGL----PD 124 Query: 128 EVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDP 187 EVS +N RK + + SE+Q + + + T+L Q AR G DP Sbjct: 125 EVS----LNRAVTEQRKGKTV------TNKTSEQQF---DALNKYGTDLTQRARDGKFDP 171 Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS 247 +IGR++E+ R +Q+L RR KNNP+L+GE GVGKTAIAEGLA RIV+GDVPE + D I S Sbjct: 172 VIGRDEEIRRVMQILLRRSKNNPVLIGEPGVGKTAIAEGLAMRIVKGDVPEGLRDKKIVS 231 Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGGQVDAANL 306 L++GSLLAG K+RG+FE+R K ++ ++ + ILF+DEIHTI+GAG G DA N+ Sbjct: 232 LEMGSLLAGAKFRGEFEERLKGVIDEVVKSAGEIILFVDEIHTIVGAGKTEGSP-DAGNM 290 Query: 307 IKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYE 366 +KP L+ G++ +IG+TT E+ I EKD AL RRFQ + + EPS+E+T+ I+ G+K +Y+ Sbjct: 291 LKPALARGELHLIGATTLDEYREI-EKDAALERRFQPVFVDEPSVEDTISILRGIKERYQ 349 Query: 367 AHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS--KRKKTVNVA 424 HH+V T A+ AA L+ +YI DR LPDKAID+IDE+ AR R+ S +R ++ Sbjct: 350 VHHNVEITDPALVAAATLSNRYITDRQLPDKAIDLIDESAARLRMALESSPERIDQLSRR 409 Query: 425 DIESVVARIARIPEKSVSQSDR-----DTLKNLGDRL 456 ++ + R A EK V +R + LK L D L Sbjct: 410 KLQLEIEREALKREKDVDSQNRLLDIENQLKTLTDEL 446 >UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organisms RepID=CLPB_STAAR Length = 869 Score = 288 bits (736), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 141/335 (42%), Positives = 219/335 (65%), Gaps = 6/335 (1%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 ++ V +I +V++ IP + +++R+ L +L D L V GQDKA++ +++A+ A Sbjct: 532 REVVTDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRA 591 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLI 534 RAG+ ++P+GSFLF GPTGVGKTE+ L+ +L ++R DMSEYME+H VSRLI Sbjct: 592 RAGIKDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLI 651 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGY+G D+GG LT+AV ++P++V+LLDE+EKAH DVFN+LLQ++D G LTD+ GR Sbjct: 652 GAPPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSV 711 Query: 595 DFRNVVLVMTTNAG--VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDH 652 DF+N +++MT+N G V K G I + M + F PE NR+D+I+ F Sbjct: 712 DFKNTIIIMTSNIGSQVLLENVKETGEITESTEKAVMTSLNAYFKPEILNRMDDIVLFKP 771 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 LS D + +VDK + +L ++L ++ +S+EVS +A+ WL ++ Y+ GARP+ R +Q + Sbjct: 772 LSIDDMSMIVDKILTQLNIRLLEQRISIEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQI 831 Query: 713 KKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 + PLA ++ +G + V L+ + N LT+ + Sbjct: 832 ETPLARMMIKEGFPEGTTIKVNLNSDNN-LTFNVE 865 Score = 265 bits (677), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 127/258 (49%), Positives = 182/258 (70%), Gaps = 2/258 (0%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 G+ S+ E + + +L + R G +DP+IGR++E+ I++L R+ KNNP+L+ Sbjct: 145 GNHVTSQNPEVNYEALAKYGRDLVEEVRQGKMDPVIGRDEEIRNTIRILSRKTKNNPVLI 204 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 GE GVGKTAI EGLA RIV+ DVPE + D T++ LD+ +L+AG KYRG+FE+R KA+LK+ Sbjct: 205 GEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELDLSALVAGAKYRGEFEERLKAVLKE 264 Query: 274 L-EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFE 332 + E D ILFIDEIH ++GAG G +DA N++KP+L+ G++ IG+TT E+ E Sbjct: 265 VKESDGRIILFIDEIHMLVGAGKTDGA-MDAGNMLKPMLARGELHCIGATTLNEYREYIE 323 Query: 333 KDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR 392 KD AL RRFQK+ ++EP +E+T+ I+ GLK +YE +H VR +A+ AA EL+ +YI DR Sbjct: 324 KDSALERRFQKVAVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDRYITDR 383 Query: 393 HLPDKAIDVIDEAGARAR 410 LPDKAID++D+A A R Sbjct: 384 FLPDKAIDLVDQACATIR 401 >UniRef50_P33416 Heat shock protein 78, mitochondrial n=49 Tax=Dikarya RepID=HSP78_YEAST Length = 811 Score = 285 bits (729), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 146/327 (44%), Positives = 216/327 (66%), Gaps = 7/327 (2%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 +V DI VVA++ IP ++V + D+D L + + LK V GQD+AI A+++A+++ RA Sbjct: 466 SVTSDDISKVVAKMTGIPTETVMKGDKDRLLYMENSLKERVVGQDEAIAAISDAVRLQRA 525 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGA 536 GL E +P+ SF+F GPTG GKTE+T L++ L + ++RFDMSE+ E+HTVSRLIGA Sbjct: 526 GLTSEKRPIASFMFLGPTGTGKTELTKALAEFLFDDESNVIRFDMSEFQEKHTVSRLIGA 585 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYV + GG LT+AV + P+AV+L DE EKAHPDV +LLQV+D G LTD+ G DF Sbjct: 586 PPGYVLSESGGQLTEAVRRKPYAVVLFDEFEKAHPDVSKLLLQVLDEGKLTDSLGHHVDF 645 Query: 597 RNVVLVMTTNAG----VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDH 652 RN ++VMT+N G + +T+ G I +E +K+ + PEF NR+D+I+ F+ Sbjct: 646 RNTIIVMTSNIGQDILLNDTKLGDDGKIDTATKNKVIEAMKRSYPPEFINRIDDILVFNR 705 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 LS V+ +VD I E+Q +L +K + ++++ EA++WL +KGYD+ GARP+ R+I + Sbjct: 706 LSKKVLRSIVDIRIAEIQDRLAEKRMKIDLTDEAKDWLTDKGYDQLYGARPLNRLIHRQI 765 Query: 713 KKPLANELLFGSLVDGGQVTVALDKEK 739 +A LL G + +G V V + K Sbjct: 766 LNSMATFLLKGQIRNGETVRVVVKDTK 792 Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 136/266 (51%), Positives = 190/266 (71%), Gaps = 11/266 (4%) Query: 152 DPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPL 211 DP QP E+ A +E F TNL +LAR G +DP+IGR++E+ RAIQ+L RR KNNP Sbjct: 88 DPNQQP--EKPA-----LEQFGTNLTKLARDGKLDPVIGRDEEIARAIQILSRRTKNNPC 140 Query: 212 LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALL 271 L+G +GVGKTA+ +GLA RIV G+VP+ + D + +LD+GSL+AG KYRG+FE+R K +L Sbjct: 141 LIGRAGVGKTALIDGLAQRIVAGEVPDSLKDKDLVALDLGSLIAGAKYRGEFEERLKKVL 200 Query: 272 KQLEQ-DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNI 330 +++++ + I+FIDE+H ++G G + G +DA+N++KP L+ G +R I +TT EF I Sbjct: 201 EEIDKANGKVIVFIDEVHMLLGLG-KTDGSMDASNILKPKLARG-LRCISATTLDEF-KI 257 Query: 331 FEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYIN 390 EKD AL+RRFQ I + EPS+ +T+ I+ GLK +YE HH VR T A+ +A L+ +YI Sbjct: 258 IEKDPALSRRFQPILLNEPSVSDTISILRGLKERYEVHHGVRITDTALVSAAVLSNRYIT 317 Query: 391 DRHLPDKAIDVIDEAGARARLMPVSK 416 DR LPDKAID++DEA A RL SK Sbjct: 318 DRFLPDKAIDLVDEACAVLRLQHESK 343 >UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales RepID=CLPB_WOLPM Length = 853 Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 146/325 (44%), Positives = 220/325 (67%), Gaps = 8/325 (2%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 KK V DI ++V++ IP ++ S+++ L N+ + + V GQ AIEA++ A++ + Sbjct: 527 KKEVTGDDIANIVSKWTGIPVDNMMHSEKEKLLNMENEIGRRVIGQKDAIEAISNAVRRS 586 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 R+G+ +KP GSFLF GPTGVGKTE+ L++ L + LLRFDMSEYME+H+VS+LI Sbjct: 587 RSGVQDTNKPFGSFLFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLI 646 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG++QGG LT+AV + P+ V+L DEIEKA+PD+FN+LLQ++D G LTD++G+ Sbjct: 647 GAPPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLI 706 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 DFRN +L++T+N G + ++ + + M+ +K F PEF NRLD II F L+ Sbjct: 707 DFRNTILILTSNLGAEIMLKGNVDSVR----NEVMQIVKSAFRPEFLNRLDEIIIFHSLT 762 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 D I++++D LQ L ++ +S+ + QEA+ +A+ GYD GARP+ RVIQ+ ++ Sbjct: 763 RDDIYKIIDVQFSYLQKTLAKRKLSISLLQEAKELIAQTGYDPEYGARPLKRVIQECIQN 822 Query: 715 PLANELLFGSLVDGGQVTV-ALDKE 738 LA +L G +V+ ++ V ALD E Sbjct: 823 NLAKLVLSGEVVENDELIVYALDNE 847 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 159/400 (39%), Positives = 250/400 (62%), Gaps = 20/400 (5%) Query: 22 HEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELEAFIEQTTPVL--PASEEERD 77 H+ EHLL +L + S ++ + AC ++ ++ +++ I++ PV+ P S Sbjct: 26 HQIFMPEHLLKVMLEDESGLVQDLINACGGNVQSISDAVDSAIKKL-PVIEGPGS---GG 81 Query: 78 TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNF 137 Q + +V + ++ + + + V +L + ++++ +L ++ V+ +N Sbjct: 82 LQLSREIAKVFEDSIGIAKRNKDSFVAVERLLQGLTAQKDDTVGKILAENGVTP-QKLNS 140 Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 + RK S PNSEE+ ++ +T ++ +LA G +DP+IGR++E+ R Sbjct: 141 VVAEMRKGSSADS------PNSEEKLNAAKK---YTKDVTELAMQGKLDPVIGRDEEIRR 191 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 +QV RR KNNP+L+GE GVGKTAI EGLA RIV DVP + D + +LD+G+L+AGT Sbjct: 192 TMQVSLRRTKNNPVLIGEPGVGKTAIVEGLANRIVANDVPLGLHDAKVLALDLGALIAGT 251 Query: 258 KYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 K+RG+FE+R KA++ +L + + ILFIDE+HT++GAGA SG +DA+NL+KP L+ G++ Sbjct: 252 KFRGEFEERLKAVINELSRAEGKVILFIDELHTLVGAGATSGA-MDASNLLKPALARGEV 310 Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAK 376 R IG+TT E+ EKD ALARRFQ + I++P+ +T+ I+ GLK +YE HH +R T Sbjct: 311 RCIGATTLDEYRQHIEKDPALARRFQPVFISQPTETDTISILRGLKERYEVHHGIRITDG 370 Query: 377 AVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 A+ AA L+ +YI DR LPDKAID+IDEA +R R+ SK Sbjct: 371 AIIAAATLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSK 410 >UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=CLPB_RHOBA Length = 881 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 160/366 (43%), Positives = 233/366 (63%), Gaps = 17/366 (4%) Query: 44 LEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEV 103 LE +VD+ L+ L + +E+ LP + + + Q L+ + +S V Sbjct: 52 LEKINVDVPKLKSLLTSELEK----LPHASGMGQARVSAKLQAALEASATSAESLKDEYV 107 Query: 104 TGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQA 163 + ++LV + + +++A LL VS D++ +S + S + PN+E Sbjct: 108 STEHLLVGL-ARTDNKAKNLLSLLGVSDNDLLTAMSQ-------IRGSARVTDPNAESTY 159 Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 + +E F +L QLA+ G +DP+IGR+ E+ R IQVL RR KNNP+L+G+ GVGKTAI Sbjct: 160 ---QALEKFGIDLTQLAQSGKLDPVIGRDNEIRRVIQVLSRRTKNNPVLIGQPGVGKTAI 216 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSIL 282 AEGLA RI +GDVP+ + + SLD+G+L+AG K+RGDFE+R K++L+++ + D IL Sbjct: 217 AEGLALRIFEGDVPQSLKGKKVVSLDMGALVAGAKFRGDFEERLKSVLREVKDSDGKVIL 276 Query: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342 FIDE+H ++GAG A G DAANL+KP L+ G +R IG+TT E+ EKD AL RRFQ Sbjct: 277 FIDELHLVVGAGNAEGS-ADAANLLKPELARGALRCIGATTLDEYRQHIEKDAALERRFQ 335 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI 402 + + EP++E+TV I+ GLKP+YE+HH VR T A+ AA L+ +YI DR LPDKAID+I Sbjct: 336 PVFVGEPNVEDTVAILRGLKPRYESHHGVRITDSALVAAANLSDRYIADRFLPDKAIDLI 395 Query: 403 DEAGAR 408 DEA +R Sbjct: 396 DEAASR 401 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 144/331 (43%), Positives = 221/331 (66%), Gaps = 6/331 (1%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 +K V +I VV+ +P + +++R L + +RL V GQD+A+ A+++A++ + Sbjct: 551 RKEVTEEEIAEVVSTWTGVPVTRMMETERAKLLVMEERLHQRVVGQDEAVTAVSDAVRRS 610 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 R+GL ++P+GSFLF GPTGVGKTE+ L++ + + ++R DMSE+MERH+VSRLI Sbjct: 611 RSGLQDPNRPIGSFLFLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEFMERHSVSRLI 670 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++GG LT+AV + P+AV+LLDE+EKAHPDVFN+LLQV+D+G LTD GR Sbjct: 671 GAPPGYVGYEEGGKLTEAVRRRPYAVILLDEMEKAHPDVFNVLLQVLDDGRLTDGQGRTV 730 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE-IKKIFTPEFRNRLDNIIWFDHL 653 +F N V+VMT+N G + +R + +D A+E+ +K F PEF NR+D+ + F L Sbjct: 731 NFTNTVVVMTSNVGSQVIQRVTEEGGGEDEMRQAVEDALKARFLPEFLNRIDDTVIFHPL 790 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 I ++V + EL+ +L G+S E++ A + +AE GYD A GARP+ RVIQ ++ Sbjct: 791 QQTQIRRIVQLQLEELRSRLAANGLSFEITDAAIDQIAEVGYDPAYGARPLKRVIQREVQ 850 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNELTY 744 PLA+ +L S +G T+ +D + ++ + Sbjct: 851 NPLASAILKNSYAEG--TTIKIDHDGDQFVF 879 >UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms RepID=B5Y5I5_PHATR Length = 997 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 153/371 (41%), Positives = 233/371 (62%), Gaps = 25/371 (6%) Query: 44 LEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPT-----LSFQRVLQRAVFHVQSS 98 L V+L LR EL+ ++ +++ R + PT + Q+VL+ A Q+ Sbjct: 146 LNKAGVNLNRLRCELDEYL---------AKQPRVSDPTNKIMGRTLQKVLETARNGKQAL 196 Query: 99 GRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPN 158 G + V+ +++A+ E + L + V DV+ + +K P S S + Sbjct: 197 GDSYVSTEGLVLAMVKEDDKFTREALMRQNVKYTDVLEVVKEMRKKSGPAISRSAESMYD 256 Query: 159 SEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV 218 + + + +L + A G +DP+IGR+ E+ RAIQ+L RR KNNP+L+G+ GV Sbjct: 257 A---------LTKYGVDLTERAEQGKLDPVIGRDDEIRRAIQILSRRTKNNPVLIGDPGV 307 Query: 219 GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-D 277 GKTAIAEG+A R++ GDVP+ + +C + LD+G+L+AG RG FE+R KA+++++ Q D Sbjct: 308 GKTAIAEGIAQRMIDGDVPDSLKNCRLIGLDMGALVAGASMRGQFEERLKAVVEEVTQSD 367 Query: 278 TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRAL 337 ILFIDE+HT++GAGAA G +DA+NL+KP L+ G++R IG+TT E+ EKD+AL Sbjct: 368 GEIILFIDEMHTVVGAGAAQ-GSMDASNLLKPALARGQLRCIGATTINEYRKYIEKDKAL 426 Query: 338 ARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDK 397 RRFQ++ I +P+ E+TV I+ GLKP+YE HH VR +A+ AA +L+ +YI DR LPDK Sbjct: 427 ERRFQQVMIDQPTPEDTVSILRGLKPRYELHHGVRIRDEALLAAAKLSHRYIPDRFLPDK 486 Query: 398 AIDVIDEAGAR 408 AID++DEA A+ Sbjct: 487 AIDLVDEACAK 497 Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 144/324 (44%), Positives = 209/324 (64%), Gaps = 12/324 (3%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI VVA IP + +S+RD + +GD+L+ + GQD+AI +TEA++ +RAGL Sbjct: 648 DIAGVVAVWTGIPPGKLLESERDRILTMGDKLRERLIGQDEAIRVVTEAVQRSRAGLNDP 707 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYV 541 KP+ S +F GPTGVGKTE L++ + L+R DMSEYME+HTVSRL+GAPPGYV Sbjct: 708 SKPIASLIFLGPTGVGKTECAKALAEFMFDSEDALIRIDMSEYMEKHTVSRLLGAPPGYV 767 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+D+GG LTDA+ + P+AVLL DE+EKAHPDVFN++LQ++D+G LTD+ G +FRN + Sbjct: 768 GYDEGGQLTDAIRRRPYAVLLFDEMEKAHPDVFNVMLQLLDDGRLTDSKGNTVNFRNTIC 827 Query: 602 VMTTNAGVRE----TERKSIG--LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 + T+N G +E IG I + T+AM E F PEF NR+D + F+ L+ Sbjct: 828 IFTSNVGSQEILDLNGSSEIGDQEIMRSRVTEAMRE---RFRPEFLNRIDEHVIFNSLNK 884 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 + + +V + L+ +L++K + L + +EA ++LAE G+D GARP+ R IQ L+ Sbjct: 885 NNLRGIVVLEVRRLEKRLEEKQMRLVLREEALDFLAEVGFDPVYGARPLKRTIQRELETV 944 Query: 716 LANELLFGSLVDGGQVTVALDKEK 739 +A +L G VDG + V + E+ Sbjct: 945 VARGILGGEFVDGDTILVDVVNER 968 >UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FCQ4_9BIFI Length = 910 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 163/395 (41%), Positives = 248/395 (62%), Gaps = 25/395 (6%) Query: 25 MTVEHLLLALLSNPSA--REALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTL 82 + V HLL ALL+ R +EA D A+ + + LP++ QP Sbjct: 29 IDVLHLLNALLTQEQGVVRGLIEAAGGDAKAIGTAVRNALTN----LPSASGSTTAQPQP 84 Query: 83 S--FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDV---VNF 137 S F+ L ++ +Q G ++ ++L+ I + +QAA +L+ + V+ + V Sbjct: 85 SRQFEAALVQSEKEMQQMGDEYISTEHLLIGIAAAAPNQAADILQANNVTAQALRAAVPT 144 Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 + G RK + P++E G + +E ++T+L A+ G +DP+IGR++E+ R Sbjct: 145 VRGGDRK---------VTSPDAE---GSYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRR 192 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 IQ+L RR KNNP+L+GE GVGKTA+ EGLA RIV GDVP + + + SLD+GS++AG+ Sbjct: 193 VIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGS 252 Query: 258 KYRGDFEKRFKALLKQLEQDTNSIL-FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 KYRG+FE+R K++L++++ I+ FIDEIHTI+GAGAA G +DA N++KP+L+ G++ Sbjct: 253 KYRGEFEERLKSVLEEIKNANGQIITFIDEIHTIVGAGAAEG-SMDAGNMLKPMLARGEL 311 Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAK 376 R+IG+TT E+ EKD AL RRFQ++ + EPS+E+T+ I+ G+ PKYEAHH V Sbjct: 312 RLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGIAPKYEAHHKVTIGDD 371 Query: 377 AVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 A+ AA L+ +YI+ R LPDKAID++DEA A R+ Sbjct: 372 ALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRM 406 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 135/321 (42%), Positives = 205/321 (63%), Gaps = 15/321 (4%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ + +V+ IP + Q + + L + D L V GQ +AI+A+++A++ +RAG Sbjct: 559 VDADSVAEIVSDWTGIPVGRLMQGENEKLLTMEDYLGKRVIGQKEAIKAVSDAVRRSRAG 618 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAP 537 + ++P GSFLF GPTGVGKTE+ L+ L + ++R DMSEYME+ +VSRLIGA Sbjct: 619 ISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAA 678 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG++QGG LT+AV + P++V+L DE+EKA+P++F++LLQV+D+G LTD GR DF+ Sbjct: 679 PGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGRTVDFK 738 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDA-----MEEIKKIFTPEFRNRLDNIIWFDH 652 N +L+MT+N G S L+++D +A M+ + F PEF NRLD+ + F Sbjct: 739 NTILIMTSNLG-------SQFLVNEDMDDEAKRKAVMDTVHMNFKPEFLNRLDDTVMFHP 791 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 L+ + + +VD + + +L + ++L+V+ AR WLA GYD A GARP+ R++Q + Sbjct: 792 LTREELGGIVDIQVANVSARLTDRRITLDVTDSAREWLANVGYDPAYGARPLRRLVQTEV 851 Query: 713 KKPLANELLFGSLVDGGQVTV 733 LA LL G + DG V V Sbjct: 852 GDQLARMLLAGKVHDGDTVLV 872 >UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organisms RepID=Q8IB03_PLAF7 Length = 1070 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 165/429 (38%), Positives = 254/429 (59%), Gaps = 43/429 (10%) Query: 40 AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSG 99 A L+ +D L QE++ ++++ P +P+ E Q++L R + V S+ Sbjct: 197 AERILKESGIDTQLLVQEIDDYLKKQ-PKMPSGFGE---------QKILGRTLQTVLSTS 246 Query: 100 R--------NEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSS 151 + ++ ++L++I SE L K+ V+ V + K + T + Sbjct: 247 KRLKKEFNDEYISIEHLLLSIISEDSKFTRPWLLKYNVNYEKVKKAVEKIRGKKKVTSKT 306 Query: 152 DPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPL 211 P QA +E ++ +L LAR G +DP+IGR+ E+ RAIQ+L RR KNNP+ Sbjct: 307 -----PEMTYQA-----LEKYSRDLTALARAGKLDPVIGRDNEIRRAIQILSRRTKNNPI 356 Query: 212 LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALL 271 L+G+ GVGKTAI EGLA +IVQGDVP+ + + SLD+ SL+AG KYRGDFE+R K++L Sbjct: 357 LLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLDMSSLIAGAKYRGDFEERLKSIL 416 Query: 272 KQLEQ-DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNI 330 K+++ + ++FIDEIHT++GAGA + G +DA N++KP+L+ G++R IG+TT E+ Sbjct: 417 KEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARGELRCIGATTVSEYRQF 476 Query: 331 FEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYIN 390 EKD+AL RRFQ+I + +PS++ET+ I+ GLK +YE HH VR A+ A L+ +YI+ Sbjct: 477 IEKDKALERRFQQILVEQPSVDETISILRGLKERYEVHHGVRILDSALVQAAVLSDRYIS 536 Query: 391 DRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK 450 R LPDKAID+IDEA + ++ SK + N+ EK + Q + + + Sbjct: 537 YRFLPDKAIDLIDEAASNLKIQLSSKPIQLENI--------------EKQLIQLEMEKIS 582 Query: 451 NLGDRLKML 459 LGD+ K L Sbjct: 583 ILGDKQKNL 591 Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 122/330 (36%), Positives = 207/330 (62%), Gaps = 12/330 (3%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K V DI ++V+ I + +S+++ + NL + L + GQD A++ +T+A++ + Sbjct: 739 KDEVTSEDIVNIVSMSTGIRLNKLLKSEKEKILNLENELHKQIIGQDDAVKVVTKAVQRS 798 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 R G+ + +P+ S +F GPTGVGKTE++ L+ L ++ FDMSEYME+H++S+LI Sbjct: 799 RVGMNNPKRPIASLMFLGPTGVGKTELSKVLADVLFDTPEAVIHFDMSEYMEKHSISKLI 858 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GA PGYVG++QGGLLTDAV K P++++L DEIEKAHPDV+N+LL+V+D G L+D G A Sbjct: 859 GAAPGYVGYEQGGLLTDAVRKKPYSIILFDEIEKAHPDVYNLLLRVIDEGKLSDTKGNVA 918 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE-----IKKIFTPEFRNRLDNIIW 649 +FRN +++ T+N G + + L + N + ++E +++ F PEF NR+D+ + Sbjct: 919 NFRNTIIIFTSNLGSQSI----LDLANDPNKKEKIKEQVMKSVRETFRPEFYNRIDDHVI 974 Query: 650 FDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 FD LS + ++ + I ++ +L K + + +++ +K YD + GARP+ RVIQ Sbjct: 975 FDSLSKKELKEIANIEIRKVANRLFDKNFKITIDDAVFSYIVDKAYDPSFGARPLKRVIQ 1034 Query: 710 DNLKKPLANELLFGSLVDGGQVTVALDKEK 739 ++ +A +L + V+ + ++L +K Sbjct: 1035 SEIETEIAVRILDETFVENDTINISLKDQK 1064 >UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 Tax=Bacteria RepID=Q2S2Z0_SALRD Length = 875 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 144/343 (41%), Positives = 219/343 (63%), Gaps = 13/343 (3%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V +I VVA + IP +S+ ++ L + + LK V GQD+AIE L++AI+ RAG Sbjct: 489 VTSEEIAEVVAMMTGIPVDKISEPEQQKLLKMEESLKEHVVGQDEAIEKLSKAIRRTRAG 548 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAP 537 L KP+GSF+F GPTGVGKTE+ L++ L L+R DMSEYME+ +VSRL+GAP Sbjct: 549 LKDPEKPIGSFIFLGPTGVGKTELAKVLTEYLFDSQESLIRIDMSEYMEKFSVSRLVGAP 608 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG ++GG LT+ V + P++V+LLDEIEKAHPDV NILLQV+D+G LTD GR+ DFR Sbjct: 609 PGYVGHEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVSNILLQVLDDGILTDGMGREVDFR 668 Query: 598 NVVLVMTTNAGVRETER--KSIGLIHQDN--------STDAMEEIKKIFTPEFRNRLDNI 647 N +L+MT+N G ++ + + IG D + + +K +F PEF NRLD++ Sbjct: 669 NTILIMTSNIGTQDIKSFGQGIGFDQTDGEDMDYTSMKSTVQDALKNVFNPEFLNRLDDV 728 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 I F+ L+ + I ++D +L + ++ G+ LE + A+ +L ++G+D+ GARP+ R Sbjct: 729 IVFNPLNKENIFDIIDIMSEDLFERAEELGLDLEFDEAAKEFLTDRGFDQKYGARPLRRA 788 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 +Q ++ P+A ++L + +G V + D E EL++ + + Sbjct: 789 LQKYVQDPMAEDILHDEITEGDTVLITHDGESEELSFEVEEGE 831 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 166/415 (40%), Positives = 252/415 (60%), Gaps = 20/415 (4%) Query: 12 MAFARAREHR--HEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEAFIEQTTP 67 ++++R R H+++ EHLLL L+ + A + L DL+ L++ +E + T+ Sbjct: 13 ISYSREEAVRLGHDYIGTEHLLLGLIREGDGIAVKILRNLGCDLLELKEAVEDTVRSTSS 72 Query: 68 VLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRK- 126 + T ++VL+ + + + ++L+++ + E+ AA +L++ Sbjct: 73 STSVG----NIPLTKQAEKVLKITYLEAKLYKSDVIGTEHLLLSLLRDDENIAAQILQQG 128 Query: 127 ----HEVSRLDVVNFISHGTRKDEPTQSSDPGS------QPNSEEQAGGEERMENFTTNL 176 ++ R ++ + IS G Q +SE + ++NF +L Sbjct: 129 FSVTYDAVRNELDSIISGKASSSSSGSGGSGGRLSSGYGQESSESENSNTPVLDNFGRDL 188 Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 +LA +DP+IGRE+E++R Q+L RR+KNNP+L+GE GVGKTAIAEGLA RIV V Sbjct: 189 TELAEEDELDPIIGREEEIKRVAQILSRRKKNNPVLIGEPGVGKTAIAEGLAARIVDRKV 248 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA 296 V+ D I +LD+ SL+AGTKYRG FE+R KA++K+LE + + ILFIDEIHTI+GAG A Sbjct: 249 SRVLYDKRIVTLDLASLVAGTKYRGQFEERMKAVMKELEDNDDIILFIDEIHTIVGAGGA 308 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 SG +DA+N+ KP L+ G ++ IG+TT E+ E D AL RRFQKI + + EETV Sbjct: 309 SGS-LDASNMFKPALARGDLQCIGATTLDEYRQNIEGDGALDRRFQKIIVDPSTPEETVN 367 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 I++ +K YE HH+VR++ +A+ AV+L+ +YI DR LPDKAIDV+DEAGAR L Sbjct: 368 ILSNIKSYYEDHHNVRFSEEAIDLAVQLSDRYITDRFLPDKAIDVMDEAGARVHL 422 >UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit clpC n=90 Tax=Bacteria RepID=CLPC_STAHJ Length = 824 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 159/444 (35%), Positives = 260/444 (58%), Gaps = 34/444 (7%) Query: 22 HEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 H + EHLLL L+ P A + LE+ ++ + +E+E I +D Sbjct: 26 HSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHG----------QDQT 75 Query: 80 PTLSF----QRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV----SR 131 TL + ++V++ ++ + N V ++L+ + E E AA + ++ +R Sbjct: 76 GTLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKAR 135 Query: 132 LDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGR 191 VV + ++ ++ + P ++ +L +A+ G +DP++GR Sbjct: 136 AQVVKALGSPEMSNKNATANKSNNTPT----------LDGLARDLTVIAKDGTLDPVVGR 185 Query: 192 EKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 251 +KE+ R I+VL RR KNNP+L+GE GVGKTAIAEGLA IV +VPE + + SLD+G Sbjct: 186 DKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKGKRVMSLDMG 245 Query: 252 SLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL 311 +++AGTKYRG+FE+R K +++++ Q N ILFIDE+HT++GAG A G +DA+N++KP L Sbjct: 246 TVVAGTKYRGEFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGA-IDASNILKPAL 304 Query: 312 SSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDV 371 + G+++ IG+TT E+ EKD AL RRFQ I + EP++E+T+ I+ GL+ +YEAHH + Sbjct: 305 ARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIAILKGLRDRYEAHHRI 364 Query: 372 RYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVA 431 + +A+ AA +L+ Y++DR LPDKAID+IDEA ++ RL N+ +IE + Sbjct: 365 NISDEALEAAAKLSDCYVSDRFLPDKAIDLIDEASSKVRL---KSHTTPNNLKEIEQEIE 421 Query: 432 RIARIPEKSVSQSDRDTLKNLGDR 455 ++ + +V + + NL D+ Sbjct: 422 KVKNEKDAAVHAQEFENAANLRDK 445 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 143/333 (42%), Positives = 219/333 (65%), Gaps = 13/333 (3%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI V+A IP +++++ D L NL L V GQ+ A+ ++++A++ ARAGL Sbjct: 475 DIGEVIAGWTGIPLTKINETESDRLLNLEQTLHDRVIGQNDAVTSISKAVRRARAGLKDP 534 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYV 541 +P+GSF+F GPTGVGKTE+ L++++ E ++R DMSE+ME+H VSRL+GAPPGYV Sbjct: 535 KRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYV 594 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G D+GG LT+ V + P++V+L DEIEKAHPDVFNILLQV+D+G LTD GR+ DFRN V+ Sbjct: 595 GHDEGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVI 654 Query: 602 VMTTNAGVRETERK--------SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHL 653 +MT+N G +E + + S G ++ M+E+K F PEF NR+D+II F L Sbjct: 655 IMTSNVGAQELQDQRFAGFGGGSEGHDYETIRKTMMKELKNSFRPEFLNRVDDIIVFHKL 714 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 S D + ++V + +L +L ++ +++ V+ +A+ +AE+GYD GARP+ R IQ ++ Sbjct: 715 SKDELKEIVTMMVNKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVE 774 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 L+ +L G+ ++G +V + D + +E Y Sbjct: 775 DNLSELILDGNQIEGKEVVI--DHDGDEFKYNI 805 >UniRef50_UPI00016B2080 clp protease ATP binding subunit n=4 Tax=candidate division TM7 RepID=UPI00016B2080 Length = 799 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 218/708 (30%), Positives = 360/708 (50%), Gaps = 52/708 (7%) Query: 50 DLVALRQELEAFIEQT--TPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGAN 107 D+VA Q + + TP L A+ +D + T + Q+ ++ + +G V G Sbjct: 107 DIVARTQSCQFMAARCGLTPNLLANTASKDVKLT---DNLWQKVIYIKEKTGSEIVHGGV 163 Query: 108 VLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEE 167 V +AI +Q +L V DV+ I R + S D S ++ GG Sbjct: 164 VALAIL-QQNPHCETILAHMHVDENDVMECIRWYNRLQKIVDSGD------SPKRTGGIA 216 Query: 168 RMENF--TTNLNQLA-RVG---GIDPLI--GREKEL-ERAIQVLCRRRKNNPLLVGESGV 218 R +F T L++ R+G G+D + GR +E+ + I + N LVG +GV Sbjct: 217 RDWSFGYTPLLDRFGIRLGASRGLDFSMESGRHQEIINQLINNFGTGGRQNAALVGPTGV 276 Query: 219 GKTAIAEGLAWRIVQG--DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ 276 GKTAI A R++ D+P + ++ LD +L++ RG+ E +L + Sbjct: 277 GKTAILHSFASRLLDAAADIPNNLKFRQVFLLDSSALISAAPGRGELEGLVMRVLGEAFT 336 Query: 277 DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 N I+ +D G G +D +N++ P+L +G +RVI + Q+F I ++ + Sbjct: 337 AKNIIICLDNAQLFFEEGV---GSIDISNVLLPILEAGNLRVILTMDDQQFLQISHRNPS 393 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L+ +I + EP ++T+ + E V Y +++ A L+ +YI+D +P Sbjct: 394 LSNALNRIVVGEPEKKDTITAMQDQILTIEYKRKVIYMYQSLIEAYRLSERYIHDLAMPG 453 Query: 397 KAIDVIDEAGARAR---LMPVSKRKKTV-NVADIESVVARIARIPEKSVSQSDRDTLKNL 452 +A+ +++ A A L+ ++ ++ + D++ VA S DR+ L NL Sbjct: 454 RAVKLLESAANYAEGGGLVTMNSVQQAIEKTMDVKVSVAS---------SADDREMLLNL 504 Query: 453 GDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA- 511 DR+ + Q A++A+++A++ ARAG+ ++++P+G+FLF GPTGVGKTE+ L++ Sbjct: 505 EDRIHKRMINQTHAVKAVSDALRRARAGVRNQNRPIGTFLFLGPTGVGKTELAKALAEVY 564 Query: 512 LGIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA 569 G E ++R D++EY+ VSRLI LT ++K P +V+LLDEIEKA Sbjct: 565 FGGEDNIVRLDLNEYVGLEDVSRLIADAS-----SDPNSLTAKILKQPFSVVLLDEIEKA 619 Query: 570 HPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG---VRETERKSIGLIHQDNST 626 HP+V LLQ++D G L D N R+ FR+ +++ T+NAG +RE + + Q S Sbjct: 620 HPNVLTTLLQLLDEGILRDINNREVSFRDAIVIATSNAGADRIREYIERGYK-VEQFESQ 678 Query: 627 DAMEEIK-KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQE 685 E IK + F PEF NR D I F L + QVVD + + L Q+ V ++V + Sbjct: 679 IVNELIKLQQFKPEFLNRFDEITVFSPLGKRELLQVVDIMLTGINKTLAQQKVQVKVDDD 738 Query: 686 ARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 A+ L E GYD +GARPM R+IQ ++ +A E+L G + GG + + Sbjct: 739 AKILLVENGYDPQLGARPMRRIIQKTVENTVAKEMLSGLVSPGGIIEI 786 >UniRef50_B3QUJ2 ATPase AAA-2 domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUJ2_CHLT3 Length = 443 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 147/337 (43%), Positives = 212/337 (62%), Gaps = 12/337 (3%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K+ + DI VV++ IP + QS+R + N+ D L+ V GQ +AI A++EA+K A Sbjct: 106 KEDIESKDIADVVSKWTGIPVSKMLQSERQKILNIEDELRKRVIGQREAIHAVSEAVKRA 165 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 RAGL E +P+GSF+F G TGVGKTE+ L+ L + ++R DMSEYME VSRL+ Sbjct: 166 RAGLSDEKRPIGSFIFLGTTGVGKTELARSLAAYLFNDEDAMVRIDMSEYMEAFNVSRLV 225 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++GG LT+AV + P +V+LLDEIEKAHPDVFNILLQV+D+G LTDN G Sbjct: 226 GAPPGYVGYEEGGQLTEAVRRKPFSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGHTV 285 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFT-------PEFRNRLDNI 647 +FRN +++MT+N G + + L ++ T E K+F PEF NR+D Sbjct: 286 NFRNTIIIMTSNLGSHLIQEEMAKLTDENKETILPELRAKLFDLMRKSLRPEFLNRVDET 345 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 I F L+ + + Q+VD ++ ++ + L ++ EA+NWL + GYD GARP+ RV Sbjct: 346 ILFTPLTREDLKQIVDIQFERIRQTAQKQNILLRITDEAKNWLGQLGYDPHFGARPLKRV 405 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 +Q + LA ++L G + DG + + L E N+L + Sbjct: 406 MQRYITNELAEKILGGEVSDGDSIEIVL--ENNQLVF 440 >UniRef50_Q7YN63 Clp protease ATP-binding subunit n=5 Tax=Apicomplexa RepID=Q7YN63_EIMTE Length = 741 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 182/585 (31%), Positives = 309/585 (52%), Gaps = 43/585 (7%) Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS 247 LIGR+KE++ I++L R+ N +L+G G+GK +I E L + I E Sbjct: 179 LIGRDKEIKNIIEILXRKLNRNIILLGNIGIGKLSIVEKLVYLIPNKIFLE--------- 229 Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLI 307 L+I +L++ + + K L L++ N IL+ + H + + N+I Sbjct: 230 LNITNLIS----QSNNINIIKNLFNFLKKYNNIILYCKDFHLLFNNSNTTTDLTYIKNII 285 Query: 308 KPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEA 367 LL KI++I +++ + I + + L F KI+I E + I +K Sbjct: 286 YELLFLNKIQIIATSSENYYDKILKNEEKLKFLFAKINILELNKNILFLI---MKQYLIK 342 Query: 368 HHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIE 427 ++ + ++L+ KYI D P ++D + + + KK + Sbjct: 343 NNINWINDNILEIIIDLSKKYIKDYAFPKIGFLILDSIINKYIKIKKNISKKDI-----I 397 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKM--LVFGQDKAIEALTEAIKMARAGLGHEH 485 +++++ ++ P + + +T+ LK+ V+GQD AI ++ ++K A GL ++ Sbjct: 398 AIISQYSKFPNTLLLKETNNTIIINNIDLKLKKYVYGQDIAITKISSSLKRAYTGLKEQN 457 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVG 542 KP+GS+L GP+G GKTE+ L+ L EL+RFDMSE+ME+H++S+LIG+PPGYVG Sbjct: 458 KPIGSWLLCGPSGTGKTELVKSLAYLLFGSEKELIRFDMSEFMEKHSISKLIGSPPGYVG 517 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 ++GGLLT+AV K P++V+L DEIEKAH D+ NI+LQ++D GTLTD+ G DF N +++ Sbjct: 518 CEEGGLLTEAVKKKPYSVILFDEIEKAHKDINNIMLQLLDEGTLTDSKGEHIDFTNTLII 577 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEE------------IKKIFTPEFRNRLDNIIWF 650 T+N G + S+ N + E+ +KK F PEF NRLD+II F Sbjct: 578 YTSNLGCPTS---SVQFKSFQNGEELSEKEYKFLSKNVDIAVKKFFKPEFLNRLDSIIVF 634 Query: 651 DHLSTDVIHQVVDKFIV--ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 LS + +++KFI +Q + + +E+ ++ + LA+ Y+ GARP+ R+I Sbjct: 635 KPLSILCLINIINKFIFNLNKNLQNNNILLQVELEEDIKILLAKLAYNPLYGARPLKRII 694 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHK 753 Q ++KP++ ++ + ++ +KEKN ++Y Q K Sbjct: 695 QQFIEKPISEIIINFNFKLPHLFSIFNNKEKNIISYLIQKINNIK 739 >UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular organisms RepID=Q4FXS7_LEIMA Length = 867 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 147/343 (42%), Positives = 213/343 (62%), Gaps = 26/343 (7%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 TV DI +VV+R IP +SQ++R+ L +L D+L + V GQD+A+ + EAI +RA Sbjct: 530 TVTETDIATVVSRWTNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRA 589 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL-------LRFDMSEYMERHTVSR 532 GL +P GSFLF GPTGVGKTE LSKA+ EL +R DMSEYME+H+V+R Sbjct: 590 GLARSDRPTGSFLFLGPTGVGKTE----LSKAVASELFDDAKYMVRLDMSEYMEQHSVAR 645 Query: 533 LIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGR 592 LIGAPPGYVG ++GG LT+ V + P+ V+LLDE+EKAHP+VFN+LLQV+D+G LTD++GR Sbjct: 646 LIGAPPGYVGHEEGGQLTEPVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGR 705 Query: 593 KADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAME--------EIKKIFTPEFRNRL 644 DF N +++MT+N G + L + D S A E E++K F PEF NRL Sbjct: 706 TVDFCNTIIIMTSNLGAQY-------LQNMDTSPKAYEVAQAQVMGEVRKFFRPEFINRL 758 Query: 645 DNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 D+II F L + ++D EL +L + + + +++EA+ ++ E +D MGARP+ Sbjct: 759 DDIILFRSLGLKEMTGIIDLITEELNGRLKDQSIRVSLTEEAKQYVLESAFDADMGARPL 818 Query: 705 ARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 R ++ N+ L+ ++ L V V L +L++ + Sbjct: 819 RRWVEKNITTELSRMIISQELSPNSTVKVTLSSNHKKLSFSVK 861 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 135/264 (51%), Positives = 185/264 (70%), Gaps = 2/264 (0%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 G + S+ Q E + + +L + A G +DP+IGR E+ R I+VL RR KNNP+L+ Sbjct: 145 GKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVIGRADEILRTIRVLSRRTKNNPVLI 204 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 GE GVGKTAI EG+A ++V+GDVP+ ++ I+SLD+G+L+AG KYRG+FE+R KA+L + Sbjct: 205 GEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLDMGALIAGAKYRGEFEERLKAVLNE 264 Query: 274 L-EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFE 332 + E D ILFIDEIH ++GAG S G +DAANL+KPLL+ G++R IG+TT +E+ E Sbjct: 265 VKESDNKIILFIDEIHLVLGAGK-SDGAMDAANLLKPLLARGELRTIGATTLEEYRQYVE 323 Query: 333 KDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR 392 KD A RRF + + EPS+EE I+ GLK +YE HH V+ T KAV A +LA +YI +R Sbjct: 324 KDAAFERRFMPVQVHEPSVEECTSILRGLKDRYEQHHGVQITDKAVVVAAQLAGRYITNR 383 Query: 393 HLPDKAIDVIDEAGARARLMPVSK 416 LPDKAID+IDEA A R+ S+ Sbjct: 384 FLPDKAIDLIDEACANVRVTLSSR 407 >UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria RepID=CLPB_BLOFL Length = 872 Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 135/248 (54%), Positives = 181/248 (72%), Gaps = 1/248 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +E FT ++ LA +DP+IGR++E+ R IQVL RR KNNP+L+G GVGKTAI EGLA Sbjct: 164 LEQFTVDITSLAEQNNLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGNPGVGKTAIVEGLA 223 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RI+ +VPE + + I SLDI +LLAGTKYRG+FE+RFK +L + +D N+ILFIDE+H Sbjct: 224 QRIINKEVPEGLKNSRILSLDIAALLAGTKYRGEFEERFKKVLYAVSKDNNTILFIDELH 283 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 ++GAG + G +DA+N+IKP L+ G++ +G+TT E+S EKD AL RRFQKI I E Sbjct: 284 VMVGAG-KTDGSMDASNMIKPKLARGELHCVGATTLDEYSRYIEKDAALERRFQKIFIIE 342 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 P+IE T+ I+ GLK +YE HH+V T A+ AA L+ +YI+DR LPDKAID+IDEA + Sbjct: 343 PNIENTIAILRGLKERYELHHNVHITDPAIVAAATLSNRYISDRQLPDKAIDLIDEAASS 402 Query: 409 ARLMPVSK 416 R+ SK Sbjct: 403 IRIQIDSK 410 Score = 251 bits (642), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 129/344 (37%), Positives = 213/344 (61%), Gaps = 9/344 (2%) Query: 394 LPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLG 453 L K + I + + RL+ + V+ +I V+++ IP + ++++ L N+ Sbjct: 511 LEKKLFNAIQSSNKKMRLL-----RNYVSEVEIAEVLSKWTGIPISRILANEKNKLLNME 565 Query: 454 DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL- 512 L LV GQD+A+ ++ AI+ +R+GL +P+GSF+F GPTGVGKTE+ LS+ L Sbjct: 566 TILHQLVIGQDEAVRVISNAIRRSRSGLSDPKRPIGSFMFLGPTGVGKTELCKALSQFLF 625 Query: 513 --GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH 570 ++R DMSE+ME+H+VS+L+GAPPGY+G++ G LT+++ + P++++LLDEIEKAH Sbjct: 626 DTDNAMVRIDMSEFMEKHSVSKLLGAPPGYIGYESGAYLTESIRRRPYSIVLLDEIEKAH 685 Query: 571 PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAME 630 DVFNILLQV+D+G LTDN GR DF N V++MT+N G ++K + + Sbjct: 686 LDVFNILLQVLDDGRLTDNQGRMVDFNNTVIIMTSNLGSDLIQKKFDISDYDTMKKTVLN 745 Query: 631 EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLE-VSQEARNW 689 + + F PEF NR+D I+ F LS + + + + L +L+++G ++ +A + Sbjct: 746 VVNQYFRPEFINRIDEIVVFHPLSIKHLIDIANIQLKYLYSRLEERGYPRTGITNKALLF 805 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 L++ G+D GARP+ R+IQ ++ PL+ ++L L+ G +T+ Sbjct: 806 LSKIGFDPIYGARPLKRIIQQYIENPLSQKILSDDLLPGRSITI 849 >UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subunit n=3 Tax=Actinobacteria (class) RepID=D2NR34_9MICC Length = 959 Score = 278 bits (711), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 211/319 (66%), Gaps = 13/319 (4%) Query: 94 HVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDP 153 Q G V+ +L+ I S +S A + + + L + I + R D + DP Sbjct: 187 RAQGFGDTYVSTEMILLGIASGTDSTATAMHKLGATAEL-IAQTIPN-VRGDRTVDTPDP 244 Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 G + +E + T+L +AR G +DP+IGR+ E+ R +QVL RR KNNP+L+ Sbjct: 245 ---------EGTFQALEKYGTDLTAIARAGKLDPVIGRDSEIRRVVQVLSRRTKNNPVLI 295 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 GE GVGKTA+ EGLA R+V GDVPE + T+ SLD+GS++AG KYRG+FE+R KA+L++ Sbjct: 296 GEPGVGKTAVVEGLAQRMVSGDVPESLRGKTLISLDLGSMVAGAKYRGEFEERLKAVLEE 355 Query: 274 LEQDTNSIL-FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFE 332 +++ I+ FIDEIHT++GAGA S G +DA N++KP+L+ G++R+IG+TT E+ E Sbjct: 356 IKKSEGQIVTFIDEIHTVVGAGA-SEGSMDAGNMLKPMLARGELRLIGATTLDEYRENIE 414 Query: 333 KDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR 392 KD AL RRFQ++ + EPS+++T+ I+ GLK +YEAHH V+ A+ AA L+ +YI R Sbjct: 415 KDPALERRFQQVYVGEPSVDDTIGILRGLKERYEAHHKVQIADSALVAAATLSNRYIPSR 474 Query: 393 HLPDKAIDVIDEAGARARL 411 LPDKAID+IDEA +R R+ Sbjct: 475 QLPDKAIDLIDEAASRLRM 493 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 151/347 (43%), Positives = 220/347 (63%), Gaps = 23/347 (6%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V DI V++ IP + Q + + L + R+ + GQ+ A+ A+++A++ ARAG Sbjct: 623 VTADDIAEVISSWTGIPAGRMMQGESEKLLEMEKRIGARLIGQEAAVVAVSDAVRRARAG 682 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG-------IELLRFDMSEYMERHTVSRL 533 + ++P+GSFLF GPTGVGKTE L+KAL L+R DMSEY E+HTVSRL Sbjct: 683 ISDPNRPIGSFLFLGPTGVGKTE----LAKALAEFQFDDERALVRIDMSEYSEKHTVSRL 738 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 +GAPPGYVG ++GG LT+AV + P++V+LLDE+EKAHP+VF+ILLQV+D+G LTD GR Sbjct: 739 VGAPPGYVGHEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRT 798 Query: 594 ADFRNVVLVMTTNAGVRETERKSIGLIHQD-----NSTDAMEEIKKIFTPEFRNRLDNII 648 DFRNV+L++T+N G S L++QD S A+E + + F PEF NRLD+II Sbjct: 799 VDFRNVILILTSNLG-------SQYLVNQDLPFEERSEKALEVVHQAFRPEFLNRLDDII 851 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F LS + + Q+V I + +L+ + ++L V++ A WL + GYD A GARP+ R++ Sbjct: 852 MFQPLSAENLGQIVGLQIKSMAKRLEDRRLTLNVTEAALEWLGKTGYDPAFGARPLRRLV 911 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAE 755 Q + LA +L G++ DG VTV ++ + S ++ KAE Sbjct: 912 QREIGDRLARGILSGAIHDGDTVTVDVNPDVASDGLSVTSEREQKAE 958 >UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 Tax=Campylobacterales RepID=C3XDZ0_9HELI Length = 898 Score = 278 bits (711), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 169/437 (38%), Positives = 267/437 (61%), Gaps = 27/437 (6%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQEL 58 + NQ E+ LN A A H++ H LLA+L SN +AL+ + ++ AL Q L Sbjct: 7 LTNQMREI-LNNAAQFAITHKNNETQPIHTLLAMLADSNMLLYQALQKNNENINALIQNL 65 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 I++ V A+ + + + S Q LQ A+ + G + G V + +S Sbjct: 66 TLEIDKLPKVSNANTQ--NMSLSKSLQEALQNALSFATTQG-DSFIGVGSFVR--ANLDS 120 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 LL+ + +L+++N + + RK G + +S+ E ++ + NL++ Sbjct: 121 HFKDLLKN--IDKLELINTLKN-MRK---------GMKIDSQSSDDTLETLDKYGINLSK 168 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 LA ++P+IGR +E+ER +Q+L R+ KNNP+L+GE GVGKTA+ EGLA +I + +VP Sbjct: 169 LAAQNKLNPVIGRNEEIERMMQILIRKTKNNPILLGEPGVGKTAVVEGLAIKIAKKEVPL 228 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + + +LD+ +L+AG KYRGDFE+R KA++ +++ + ILFIDEIHTI+GAGA+ G Sbjct: 229 SLQNKQVIALDMTALMAGAKYRGDFEERLKAVVDEVKNNDEIILFIDEIHTIVGAGASEG 288 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DAAN++KP L+ G++R IG+TT +E+ FEKD ALARRFQ ++I EPS E +QI+ Sbjct: 289 G-MDAANILKPALARGELRTIGATTLKEYRKYFEKDAALARRFQPVNINEPSQNEALQIM 347 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM------ 412 G+K EAHH+V T A+ +V+L+ +YI +R+LPDKAID+IDEA A ++ Sbjct: 348 RGIKESLEAHHNVSITDGALVESVKLSSRYITNRYLPDKAIDLIDEAAAELKMQIESEPK 407 Query: 413 PVSKRKKTVNVADIESV 429 ++K K+ + ++E V Sbjct: 408 AIAKAKRDIEALEVEKV 424 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 127/355 (35%), Positives = 205/355 (57%), Gaps = 41/355 (11%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K V I +V+R +IP + +S++ + ++ + LK V GQ+KAIE++ AIK Sbjct: 528 KHAVTKESIAEIVSRWTQIPVGKMLESEKHRILHIEENLKASVIGQNKAIESIARAIKRN 587 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLI 534 +AGL ++P+ SFLF G +GVGKT+ L+K L EL+R DMSEYM+ ++L Sbjct: 588 KAGLNDANRPIASFLFLGSSGVGKTQSAKALAKFLFDSEKELVRLDMSEYMQEIDATKLT 647 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GA PGYVG+++GG+LT+A+ + P++V+L DE+EKAHP VFN+LLQV+D+G L+DN G Sbjct: 648 GAAPGYVGYEEGGILTEAIKRKPYSVVLFDEVEKAHPKVFNVLLQVLDDGRLSDNKGVVV 707 Query: 595 DFRNVVLVMTTNAGVR----------------------------------ETERKSIGLI 620 DF+N ++++T+N G E E++ + + Sbjct: 708 DFKNTIIILTSNIGSEFICEDSKEVAMKRDDIAALQKAIKEGNIESREKLEREKEILNSL 767 Query: 621 HQDNSTDAME----EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK 676 + ME E+KK F PEF NRLD+ I F+ LS D I ++D ++ ++L + Sbjct: 768 VEAQRASQMEKIEQELKKFFRPEFLNRLDDKIIFNALSRDDIRNIIDILTQQVALKLKDR 827 Query: 677 GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQV 731 ++L ++ +++LA+ G+D GARP+ R +Q ++ LA+ +L L + +V Sbjct: 828 NITLVLTDSMKDYLADSGFDPVFGARPLKRAVQREIEDRLADLILNEELSEQSKV 882 >UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8B6K3_GIALA Length = 882 Score = 277 bits (709), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 158/400 (39%), Positives = 241/400 (60%), Gaps = 21/400 (5%) Query: 17 AREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELEAFIEQTTPVLPASEE 74 ++ H H + H+ AL ++ + +A++ CS D+ A+R+ +E +++T V P + Sbjct: 22 SQRHGHSLVNQYHIAAALFADDDSISSKAVQKCSGDVSAIRRAIETGLKKTPSVTPVPDT 81 Query: 75 ERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDV 134 P + ++ + + + GR+E + +A + Q++ A LR+ V+ Sbjct: 82 ---PSPAGGYLGIINKMSAYAEE-GRDEYL-STFHLAKAAAQDTDLARCLREGRVT---- 132 Query: 135 VNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKE 194 R E + G NSE E +E + + A G DPLI R+ E Sbjct: 133 ------SNRFVEEIEKMKKGRSMNSEFAEDTCEALEKYCVEMVAKAEEGKYDPLIARDNE 186 Query: 195 LERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 L R +++L RR KNNP+L G +GVGKTAI EGLA RIV+ DVP+ + + IY+LD+G+L+ Sbjct: 187 LRRIVEILSRRTKNNPVLTGPAGVGKTAILEGLAQRIVRADVPQNIRNARIYALDLGALI 246 Query: 255 AGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS 313 AG +YRG FE+R KA+L +L++ + NSILFIDEIHT+IGAG S G DAANL+KP L+ Sbjct: 247 AGAQYRGQFEERLKAILDELKKSEGNSILFIDEIHTLIGAG-GSKGTSDAANLLKPALAR 305 Query: 314 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 G+IR IG+TT +E+ N DRA RRF ++ + EP++E+T+ I+ GL +Y++HH +R Sbjct: 306 GEIRCIGATTTEEYRNHIASDRAFERRFAEVFVAEPNVEDTISILRGLSGRYQSHHQIRI 365 Query: 374 TAKAVRAAVELAVKYIN--DRHLPDKAIDVIDEAGARARL 411 T A+ AA +LA +Y+ RH PD AID++DEAGA R+ Sbjct: 366 TDGALVAAAQLANRYVRAMGRHNPDAAIDLLDEAGASVRV 405 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 119/309 (38%), Positives = 183/309 (59%), Gaps = 17/309 (5%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 ++ +VV++ IP ++++DR+ L +L + V GQ+ A++A+ +I ARAGL Sbjct: 549 EVANVVSKWTGIPVNKLTRTDREKLLSLEQTISSKVIGQEPAVKAVCSSILRARAGLSRP 608 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL-------LRFDMSEYMERHTVSRLIGAP 537 +P+GSFLF G +GVGKT L+K + EL + DMSEY E+H+VSRLIGAP Sbjct: 609 TQPLGSFLFLGSSGVGKT----YLAKTIAEELYDSVDSMIHIDMSEYTEQHSVSRLIGAP 664 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG++Q G LT+AV + +AV+L DEIEKAHP + ILLQ++D G LTD G DF Sbjct: 665 PGYVGYEQAGQLTEAVSRKRYAVVLFDEIEKAHPKILTILLQILDEGRLTDGKGNCVDFT 724 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE----IKKIFTPEFRNRLDNIIWFDHL 653 N V+++T+N G RE + + + A E ++ PE NRLD++I F+ L Sbjct: 725 NTVIMLTSNLGSRELLQCYHSNVSASQAKQAKEHVIGVVRSTLPPELINRLDDLIVFNPL 784 Query: 654 STDVIHQVVDKFIVELQVQLD-QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 + D + ++ +L+ +L + G+ L V +A +A + D GARP+ R I+ + Sbjct: 785 TKDALVKIFRSLCGQLEERLQHESGLRLRV-DDAVADIALRDSDMVYGARPLRRFIEREI 843 Query: 713 KKPLANELL 721 +A +L+ Sbjct: 844 TTAVARKLI 852 >UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=HS101_ARATH Length = 911 Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 156/395 (39%), Positives = 235/395 (59%), Gaps = 21/395 (5%) Query: 22 HEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 H T HL AL+S+P+ +A+ + + A Q E I Q LP+ D Sbjct: 26 HAQFTPLHLAGALISDPTGIFPQAISSAGGENAA--QSAERVINQALKKLPSQSPPPDDI 83 Query: 80 P-TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFI 138 P + S +V++RA +S G + +++ + + + + D++N + Sbjct: 84 PASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLEDSQIR-------------DLLNEV 130 Query: 139 SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA-RVGGIDPLIGREKELER 197 T + + G + E A G+ + T L + G +DP+IGR++E+ R Sbjct: 131 GVATARVKSEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDPVIGRDEEIRR 190 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 +++L RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVP + D + SLD+G+L+AG Sbjct: 191 VVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLISLDMGALVAGA 250 Query: 258 KYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 KYRG+FE+R K++LK++E + ILFIDEIH ++GAG G +DAANL KP+L+ G++ Sbjct: 251 KYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGS-MDAANLFKPMLARGQL 309 Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAK 376 R IG+TT +E+ EKD A RRFQ++ + EPS+ +T+ I+ GLK KYE HH VR + Sbjct: 310 RCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYEGHHGVRIQDR 369 Query: 377 AVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 A+ A +L+ +YI RHLPDKAID++DEA A R+ Sbjct: 370 ALINAAQLSARYITGRHLPDKAIDLVDEACANVRV 404 Score = 265 bits (676), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 143/328 (43%), Positives = 207/328 (63%), Gaps = 6/328 (1%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VV+R IP + Q++++ L L DRL V GQ++A+ A++EAI +RAGLG Sbjct: 537 IAEVVSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQ 596 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P GSFLF GPTGVGKTE+ L++ L + L+R DMSEYME+H+VSRLIGAPPGYVG Sbjct: 597 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 656 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 ++GG LT+AV + P+ V+L DE+EKAH VFN LLQV+D+G LTD GR DFRN V++ Sbjct: 657 HEEGGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVII 716 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDA-MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 MT+N G G + + + D M E++K F PE NRLD I+ FD LS D + +V Sbjct: 717 MTSNLGAEHLLAGLTGKVTMEVARDCVMREVRKHFRPELLNRLDEIVVFDPLSHDQLRKV 776 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 + ++ V+L ++GV+L V+ A +++ + YD GARP+ R ++ + L+ ++ Sbjct: 777 ARLQMKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVV 836 Query: 722 FGSLVDGGQVTVALDKEKNELTYGFQSA 749 + + TV +D +L Y +S Sbjct: 837 REEIDENS--TVYIDAGAGDLVYRVESG 862 >UniRef50_C4R0B7 Oligomeric mitochondrial matrix chaperone n=48 Tax=cellular organisms RepID=C4R0B7_PICPG Length = 824 Score = 276 bits (707), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 139/346 (40%), Positives = 232/346 (67%), Gaps = 13/346 (3%) Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 ++V DI VV+++ +P +S+ + ++D L + + +K V GQD+AI ++ +A+++ R Sbjct: 465 ESVTSDDIAWVVSKMTGVPVQSLMKGEKDKLLYMEESIKSRVIGQDEAIHSVADAVRLQR 524 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIG 535 AGL +E +P+ SF+F GPTG GKTE+T L++ L + ++RFDMSE+ ERH++SRLIG Sbjct: 525 AGLTNEKRPIASFMFLGPTGTGKTELTKSLAEFLFNDENAVVRFDMSEFQERHSLSRLIG 584 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APP YVGF++GG LT+AV + P+AV+L DE EKAH D+ ++LQ++D G LTD+ G K D Sbjct: 585 APPSYVGFEEGGELTEAVRRKPYAVVLFDEFEKAHRDISKLMLQILDEGNLTDSQGHKID 644 Query: 596 FRNVVLVMTTNAG----VRETERKSI-GLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 F+N +++MT+N G + +TE +++ G + + + ++ +K+ + PEF NRLD+++ F Sbjct: 645 FKNTIIIMTSNLGQDLLLADTELENVGGKVSEKTKNEVIQVMKQNYPPEFINRLDDVLVF 704 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 + LS + + ++VD + E+Q +L + + L+++ A+ WL EKGYD GARP+ RVI+ Sbjct: 705 NRLSRESLRKIVDIRLSEVQDRLVDRRIELKLTDAAKEWLTEKGYDPLYGARPLNRVIKK 764 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 L PL+ L+ G + + V V L ++T ++K++AEA Sbjct: 765 QLLNPLSIRLIQGEITNNSTVKVDLVDGDLQIT-----SEKNEAEA 805 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 129/249 (51%), Positives = 180/249 (72%), Gaps = 2/249 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ + NL QLA+ G +DP+IGR++E+ R IQ+L RR KNNP L+G +G GKTAI EGLA Sbjct: 92 LQKYGVNLTQLAKDGKLDPVIGRDEEIRRTIQILSRRTKNNPALIGNAGTGKTAIMEGLA 151 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEI 287 RI++G+VPE M D + +LD+GSL++G K+RG+FE+R KA+LK+L E N ILFIDE+ Sbjct: 152 QRIIKGEVPESMKDKEVVALDLGSLISGAKFRGEFEERLKAVLKELDEAHGNIILFIDEL 211 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 H ++G G A G +DA+NL+KP L+ G+++ G+TT +E+ EKD ALARRFQ + + Sbjct: 212 HILLGLGKAEGS-IDASNLLKPALARGQLQCCGATTIEEYRKYIEKDAALARRFQSVLVN 270 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS+++ + I+ GLK KYE HH VR T A+ A + +YI DR LPDKAID++DEA + Sbjct: 271 EPSVQDAISILRGLKEKYEIHHGVRITDSALVTAAVYSNRYITDRFLPDKAIDLVDEACS 330 Query: 408 RARLMPVSK 416 RL SK Sbjct: 331 ALRLQHESK 339 >UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RIQ4_9ACTO Length = 832 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 212/329 (64%), Gaps = 5/329 (1%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K+ V DI +VVA IP + + + L + + L V GQ +A+ A+++A++ A Sbjct: 502 KEEVGADDIATVVASWTGIPAGRLLEGETAKLLRMEESLGARVVGQTEAVSAVSDAVRRA 561 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 RAG+ +P GSFLF GPTGVGKTE+ L++ L + ++R DMSEY E+H+V+RL+ Sbjct: 562 RAGVADPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLV 621 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++GG LT+AV + P++V+LLDE+EKAHPDVF++LLQV+D+G LTD GR Sbjct: 622 GAPPGYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTV 681 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 DFRN +L++T+N G + + L + + ++ F PEF NRLD+I+ F L Sbjct: 682 DFRNAILILTSNLG--SSMISDLTLAEEQRREGVLAVVRSHFKPEFLNRLDDIVVFAALL 739 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 D + +VD + ++ +L + ++L+VS+ AR WLAE GYD GARP+ R++Q + Sbjct: 740 GDDLRAIVDIQLDRMRARLADRRLALDVSEAARGWLAEHGYDPIYGARPVRRLVQSAIGD 799 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNELT 743 LA LL G++ DG V V L K+ LT Sbjct: 800 QLARALLSGAIRDGDTVQVDLADGKDGLT 828 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 3/102 (2%) Query: 332 EKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYIND 391 EKD AL RRFQ + + EP+I +T+ I+ GLK +YE HH VR T A+ AA L+ +YI D Sbjct: 295 EKDPALERRFQPVLVGEPTIADTIGILRGLKERYEVHHGVRITDAALVAAAALSDRYITD 354 Query: 392 RHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 433 R LPDKAID++DE+ +R R M + R V V +IE V R+ Sbjct: 355 RFLPDKAIDLVDESASRLR-MEIDSR--PVEVDEIERAVRRL 393 >UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit ClpC n=34 Tax=Bacteroidetes RepID=B2RGN2_PORG3 Length = 859 Score = 275 bits (702), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 136/274 (49%), Positives = 193/274 (70%), Gaps = 7/274 (2%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ F T++ +A G +DP++GRE+E+ER IQ+L RR+KNNP+L+GE GVGK+AI EGLA Sbjct: 213 LDTFGTDITAMAAAGKLDPVVGREQEIERVIQILSRRKKNNPVLIGEPGVGKSAIVEGLA 272 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RIV V ++ D I SLD+ ++AGTKYRG FE+R KA+L +L+++ ILFIDEIH Sbjct: 273 ERIVNRKVSRILFDKRIISLDLAQMVAGTKYRGQFEERLKAVLDELKKNPQIILFIDEIH 332 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 TI+GAG+A+G +D AN++KP L+ G+++ IG+TT E+ EKD AL RRFQK+ I Sbjct: 333 TIVGAGSAAGS-MDTANMLKPALARGQVQCIGATTLDEYRKNIEKDGALERRFQKVPIAP 391 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 + EET+ I+ +K KYE +H VRYT +A++AAVEL +Y++DR PDKAID +DEAGA Sbjct: 392 STAEETLTILQNIKEKYEDYHGVRYTDEAIKAAVELTDRYVSDRFFPDKAIDAMDEAGAS 451 Query: 409 ARLMPVSKRKKTVNVADIESVVARIARIPEKSVS 442 + V K +IE + A +A + E +S Sbjct: 452 VHITNVVAPK------EIEILEAELASVRENKLS 479 Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 142/334 (42%), Positives = 222/334 (66%), Gaps = 13/334 (3%) Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 +SK ++TV+ + VVA + +P + +S + + L+ + D LK V GQD AIE + A Sbjct: 514 MSKHRETVDENVVAHVVALMTGVPAERLSTGEGERLRTMADDLKTKVVGQDTAIEKMVRA 573 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTV 530 I+ R GL +E KP+GSFLF GPTGVGKT + +L++ L + ++R DMSEYME+ +V Sbjct: 574 IQRNRLGLRNEKKPIGSFLFLGPTGVGKTYLAKKLAEYLFEDENAMIRVDMSEYMEKFSV 633 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 SRL+GAPPGYVG+++GG LT+ V + P++V+LLDEIEKAH DVFN+LLQVMD G LTD+ Sbjct: 634 SRLVGAPPGYVGYEEGGQLTERVRRKPYSVVLLDEIEKAHADVFNLLLQVMDEGQLTDSL 693 Query: 591 GRKADFRNVVLVMTTNAGVRETER--KSIGL-------IHQDNSTDAMEE-IKKIFTPEF 640 GR+ +F+N V+++T+N G R+ + + IG ++++S +++ + K F+PEF Sbjct: 694 GRRVNFKNTVIIITSNVGTRQLKDFGQGIGFRSEKDEEANKEHSRSVIQKALNKTFSPEF 753 Query: 641 RNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMG 700 NRLD+II FD L I ++VD + + ++ + G L ++ EA++ +A KGYD G Sbjct: 754 LNRLDDIILFDQLGKTEIRRMVDIELKAVLARIHRAGYDLVLTDEAKDVIATKGYDLQYG 813 Query: 701 ARPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 ARP+ R +Q+ ++ L + +L G + G +T++ Sbjct: 814 ARPLKRTLQNEVEDRLTDLILSGQIEKGQTLTLS 847 >UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVK9_9DELT Length = 873 Score = 275 bits (702), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 168/410 (40%), Positives = 239/410 (58%), Gaps = 29/410 (7%) Query: 14 FARAREHRHEFMTVEHLLLALLS---NPSAREALEACSVDLVALRQELEAFIEQTTPVLP 70 A +EH+H +T HL+ +LL+ NP+ AL+ DL L + +T +L Sbjct: 20 LAVKKEHQH--VTPWHLMSSLLNIGKNPTLT-ALQESGADLDKLGGRV------STSLLA 70 Query: 71 ASEEERDTQPTLSFQRVLQRAVFHVQS---SGRNEVTGAN-VLVAIFSEQESQAAYLLRK 126 + Q T R L+R + Q + G N +L+A QE A L + Sbjct: 71 QPKALASAQQT-PISRDLERLFINAQEIAEKAEEKYIGINHILLAALEIQELAGA--LEE 127 Query: 127 HEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGID 186 R + + D P Q PG E + +T +L + AR G +D Sbjct: 128 AGADREKLTLALQQVRSVDGPGQGKAPGDD---------FEYLAQYTKDLTESARQGELD 178 Query: 187 PLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIY 246 P+IGRE+E+ A Q+L RR KNNP+++GE GVGKTA+ EGLA RIV GDVPE + D +I Sbjct: 179 PVIGREEEIRMASQILSRRLKNNPIIIGEPGVGKTAVVEGLAQRIVNGDVPESLQDVSIL 238 Query: 247 SLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANL 306 +LD+G L+AG KYRG+FE+RFK +L+++ N I FIDEIH ++GAG S G +DAANL Sbjct: 239 ALDLGQLIAGAKYRGEFEERFKRVLQEITDAGNIITFIDEIHMLVGAG-GSEGTMDAANL 297 Query: 307 IKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYE 366 IKP LS G IR +G+TT +E+ EKD AL RRFQ + + EP ++T+ I+ G+K KYE Sbjct: 298 IKPALSRGDIRCVGATTSEEYRKHIEKDSALMRRFQTVTVEEPDHDKTLAILRGIKGKYE 357 Query: 367 AHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 HH + + ++ A+ +L+ +YI+DR LPDKAID++D+AGA R+ SK Sbjct: 358 THHGIHISDSSLGASAKLSQRYISDRFLPDKAIDLMDQAGAALRISLASK 407 Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 134/337 (39%), Positives = 214/337 (63%), Gaps = 5/337 (1%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI + V+R IP + + +++ L D L+ V GQD+ +E +++A++ +RAG+ Sbjct: 536 DIAACVSRWTGIPVSKLMEEEKERWLQLEDYLRKRVVGQDQVLETISKAVRRSRAGVQDP 595 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYV 541 ++P+GSFL GPTGVGKTE+ L++ L + L+R DMSE+ME+H+V+RL GAPPGYV Sbjct: 596 NRPLGSFLMLGPTGVGKTEMAKALAEFLFDDERSLVRIDMSEFMEKHSVARLTGAPPGYV 655 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+++GG+LT+ + + P++V+L DE+EKAHPD FN+ LQV+D+G LTD GR F N V+ Sbjct: 656 GYEEGGVLTNKIRRRPYSVVLFDEVEKAHPDAFNLFLQVLDDGRLTDGQGRTTHFYNTVI 715 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 +MT+N G E Q + M+ ++ F PEF NRLD+I+ + L+ +V+ + Sbjct: 716 LMTSNLGAETIEPAETEEEVQKMRSTLMDVVRGFFRPEFLNRLDDILICNPLTPEVMPPI 775 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 VD + L L +G+ +++S EA++ LA+ G++ GARP+ R IQ +L+ PLA L+ Sbjct: 776 VDIQLKRLNKLLADRGIEMDISDEAKHLLAQDGFNPLYGARPLKRAIQTSLQDPLAEMLI 835 Query: 722 FGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 + +GG + V D E LT + +Q + ++A Sbjct: 836 KEGMDEGGSINV--DVEDGRLTIRKEESQHEEPDSAE 870 >UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellular organisms RepID=CLPB2_CHLTE Length = 442 Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 137/255 (53%), Positives = 186/255 (72%), Gaps = 5/255 (1%) Query: 158 NSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESG 217 N+EE + ++ ++ NLN L G +DP+IGR+ E+ R +Q+L RR KNNP+L+GE G Sbjct: 156 NAEESY---QSLKKYSRNLNDLVIKGKLDPVIGRDDEIRRVLQILSRRTKNNPVLIGEPG 212 Query: 218 VGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-Q 276 VGKTAI EG+A RIV GDVPE + I +LDI +L+AGTK+RG+FE+R KAL+K+++ Sbjct: 213 VGKTAIVEGIAQRIVGGDVPENLKSKQIAALDIAALVAGTKFRGEFEERLKALVKEVQAS 272 Query: 277 DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 D ILFIDE+H ++GAG+A G +DAAN++KP L+ G++R IG+TT E+ EKD A Sbjct: 273 DGEVILFIDELHLLVGAGSAEGS-MDAANILKPALARGELRCIGATTLDEYRKHIEKDAA 331 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L RRFQ + + +PS+E+TV I+ GLK KYE HH VR A+ AA EL+ +YI DR LPD Sbjct: 332 LERRFQTVIVDQPSVEDTVSILRGLKEKYEIHHGVRIKDAALVAAAELSNRYIADRFLPD 391 Query: 397 KAIDVIDEAGARARL 411 KAID+IDEA +R RL Sbjct: 392 KAIDLIDEACSRLRL 406 >UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria RepID=D1B2U8_SULD5 Length = 856 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 128/245 (52%), Positives = 181/245 (73%), Gaps = 1/245 (0%) Query: 167 ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 E +E + NL +LA G +DP+IGR++E++R +Q+L R+ KNNP+L+GE G GKTAIAEG Sbjct: 160 ESLEKYGINLTKLASEGKLDPVIGRDEEIQRMMQILIRKTKNNPILIGEPGTGKTAIAEG 219 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDE 286 LA RI DVP + + ++ +LD+ +L+AG KYRG+FE R KA++ ++++ N ILFIDE Sbjct: 220 LALRIAHNDVPLSLQNKSVVALDMSALIAGAKYRGEFEDRLKAVIDEVKKSGNVILFIDE 279 Query: 287 IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 IHTI+GAG AS G +DAAN++KP L+ G++ IG+TT +E+ FEKD AL RRFQ + + Sbjct: 280 IHTIVGAG-ASEGSMDAANILKPALARGELHTIGATTLREYRKYFEKDAALQRRFQPVTV 338 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EPSI E +QI+ G+K EAHH+V A+ AA +L+ +YI+DR LPDKAID+IDEA Sbjct: 339 NEPSINEALQILRGIKEHLEAHHNVSIQDSALIAAAKLSSRYISDRFLPDKAIDLIDEAA 398 Query: 407 ARARL 411 A ++ Sbjct: 399 AELKM 403 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 138/319 (43%), Positives = 209/319 (65%), Gaps = 7/319 (2%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K +V+ I ++V++ IP + QS++ + ++ + LK V GQD AI+A+ AIK Sbjct: 531 KNSVDEEMIATIVSKWTGIPVNKMLQSEKAKVLHVEEYLKKEVVGQDAAIKAIGRAIKRN 590 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLI 534 +AGL ++KP+GSFLF GPTGVGKT+ L+ L L+RFDMSEYME+H+VSRL+ Sbjct: 591 KAGLSEQNKPIGSFLFLGPTGVGKTQSAKALANFLFDTTKALIRFDMSEYMEKHSVSRLV 650 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+D+GG LT+AV + P++V+L DEIEKAHPDVFNILLQV+D G LTDN G Sbjct: 651 GAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDEGRLTDNKGVTV 710 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 DF+N ++++T+N K + + + + M+E++ F PEF NRLD+II F+ LS Sbjct: 711 DFKNTIIILTSNIA----SSKIMEFEGEKRTEEVMKELRMHFKPEFLNRLDDIIIFNPLS 766 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 D + ++V +++ +L K + E++ A++ +AE G+D GARP+ R + + ++ Sbjct: 767 EDGLREIVTIMFGDIEKKLAHKEIKAELTTTAKSLIAEAGFDPVYGARPLKRALYELVED 826 Query: 715 PLANELLFGSLVDGGQVTV 733 LA +L L +G + + Sbjct: 827 KLAELILEDKLHEGEGIVI 845 >UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=Proteobacteria RepID=B6R3N5_9RHOB Length = 901 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 161/400 (40%), Positives = 234/400 (58%), Gaps = 20/400 (5%) Query: 22 HEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 H+ +T+EH L++L S P+ R +++ +VD+ L + A + V E D Sbjct: 33 HQEVTIEHFLISLASQPAVDFRLLIQSQNVDVDVLNEAFRATFNRYRRV------EADRT 86 Query: 80 PTLS--FQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSE-----QESQAAYLLRKHEVSR 131 PT S Q +LQ A G+ V VL+A+ ++ Q L R + Sbjct: 87 PTFSPLLQDLLQDAWLIASVEQGKKTVRSGAVLIALLNDRGRYMQMDYYPLLERVSSDTL 146 Query: 132 LDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGR 191 L + ++ G+ + + G ++ + A G + + TN QLA+ G IDP+ R Sbjct: 147 LRQFDELTAGSFEKDHRAGQGAGGAASAGDTAEG--FLHKYGTNFTQLAKDGKIDPIFCR 204 Query: 192 EKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 251 + E+ + I++LCRRRKNNP+ VGE+GVGKTA+AEGLA RI G+VPE A+ ++ LD+G Sbjct: 205 DNEIRQIIEILCRRRKNNPICVGEAGVGKTALAEGLALRIANGEVPEDFANVALWGLDVG 264 Query: 252 SLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGGQVDAANLIKPL 310 +L AG +G+FEKR K ++ ++ ILFIDE HT+IGAG GG DAANL+KP Sbjct: 265 ALQAGASMKGEFEKRLKGVIDEVRSSAEPIILFIDEAHTLIGAGGDQGGS-DAANLLKPA 323 Query: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD 370 L+ G+++ I +TT+ E+ FEKD AL RRFQ + + EP+I+E + I+ GLK YE H Sbjct: 324 LARGELKTIAATTWTEYKKYFEKDPALTRRFQLVKLDEPTIDEAIIIMRGLKKAYEEAHG 383 Query: 371 VRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR 410 V T +A+ A+V LA +YI R LPDKAIDV+D A AR R Sbjct: 384 VYITEEAIGASVRLAARYITGRQLPDKAIDVLDTACARVR 423 Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 120/370 (32%), Positives = 201/370 (54%), Gaps = 25/370 (6%) Query: 401 VIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 +I+EAG+ L+ V V A+I ++++ IP S+ Q D L L + +K + Sbjct: 532 LIEEAGSEP-LISVE-----VGSAEIAAIISDWTGIPVNSMVQDDYHRLLTLAETMKKAI 585 Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL--GIELLR 518 GQD AI+A+ ++ +R L + +P+G F AGP+GVGKTE +++S+ L G E + Sbjct: 586 KGQDHAIDAIEARLRASRLDLHKKGQPLGVFFLAGPSGVGKTETALEVSRRLFGGEEFIT 645 Query: 519 -FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 +MSEY ERHTVSRLIG+PPGYVG+ +GG+LT+A+ K P++V+LLDE+EKA P+V N+ Sbjct: 646 TINMSEYQERHTVSRLIGSPPGYVGYGEGGVLTEAIRKKPYSVVLLDEVEKADPNVLNLF 705 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFT 637 Q D G L D GR D RNVV +T+N G + E +D+ + + K T Sbjct: 706 YQAFDKGELADGEGRLIDCRNVVFFLTSNLGSDQIENWVAN--AEDDQVPSHGSMLKSLT 763 Query: 638 PEFRN--------RLDNIIWF---DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEA 686 P F R++ +++ + + D++ +D I L+ + + ++L +++ Sbjct: 764 PLFAQHFKPALLARMEPLVYMPLSEEVLADIVQMRLDDLIELLK---ETQKIALTITEAT 820 Query: 687 RNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 + + + GAR + +VIQ L L+ E+L ++ +D +++ + F Sbjct: 821 YGRVTQMCRVASNGARLVDQVIQRQLLPTLSIEILEAGHRGEHIASITIDSPEDDGGFSF 880 Query: 747 QSAQKHKAEA 756 + + A A Sbjct: 881 SAVFQEDAVA 890 >UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organisms RepID=Q4UAC3_THEAN Length = 1150 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 132/249 (53%), Positives = 182/249 (73%), Gaps = 2/249 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + F+ +L +AR G +DP+IGR+ E+ R I++L RR KNNP+L+G+ GVGKTAIAEGLA Sbjct: 307 LNKFSKDLTDMARNGKLDPVIGRDNEIRRTIEILSRRTKNNPVLLGDPGVGKTAIAEGLA 366 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEI 287 RIV GDVP+ + + + SLDI +++AGT YRG+FE+R K +L ++E I +FIDEI Sbjct: 367 NRIVSGDVPDSLKNRKVISLDIAAIVAGTMYRGEFEERLKEILNEIENSQGEIVMFIDEI 426 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT++GAG S G +DA N++KP+L+ G++R IG+TT QE+ EKD+AL RRFQ I I Sbjct: 427 HTLVGAG-ESQGSLDAGNILKPMLARGELRCIGATTLQEYRQKIEKDKALERRFQPIYID 485 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EP+IEET+ I+ GLK +YE HH VR + AV L+ +YI DR+LPDKAID+IDEA A Sbjct: 486 EPNIEETINILRGLKERYEVHHGVRILDSTLIQAVLLSNRYITDRYLPDKAIDLIDEAAA 545 Query: 408 RARLMPVSK 416 + ++ SK Sbjct: 546 KLKIQLSSK 554 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 117/340 (34%), Positives = 189/340 (55%), Gaps = 58/340 (17%) Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 IP + +S ++ + L + L + GQ +AI+A+ A++ +R G+ KP+ + +F G Sbjct: 783 IPLNKLIKSQKEKILQLNEELHKRIIGQQEAIDAVVNAVQRSRVGMNDPKKPIAALMFLG 842 Query: 496 PTGVGKTEVTVQLSKAL---GIEL---------------LRFDMSEYMERHTVSRLIGAP 537 PTGVGKTE++ +++ L GI L +RFDMSEYME+H+VS+L+GAP Sbjct: 843 PTGVGKTELSKAIAEQLFDSGITLRCLLPRPPTTTKDAIIRFDMSEYMEKHSVSKLVGAP 902 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEI-------------------EKAHPDVFNILL 578 PGY+G++QGGLLT+A+ + P+++LL DE+ H DV+NILL Sbjct: 903 PGYIGYEQGGLLTEAIRRKPYSILLFDEMYLHYGACSSPTGVLSYILKSTTHSDVYNILL 962 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET-ERKSIGLIHQDNSTDAMEEIKKIFT 637 QV+D+G LTD+ GRK +F N +++ T+N G + E + M +++ F+ Sbjct: 963 QVLDDGRLTDSLGRKVNFTNSLIIFTSNLGSQNILELARFPEKRNEMKNKVMTSVRQNFS 1022 Query: 638 PEFRNRLDNIIWFD----------------HLSTDV----IHQVVDKFIVELQVQLDQKG 677 PEF NR+D I FD H T+ + ++V+ +++L +L +K Sbjct: 1023 PEFLNRIDEFIVFDSLTKIGTLRCSVTVLGHTVTNTPKRELKKIVNMEMMKLSNRLAEKN 1082 Query: 678 VSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 + L + A + +A+ GYD A GARP+ R IQ ++ P+A Sbjct: 1083 IKLSIDDAAMSHIADIGYDPAYGARPLKRTIQKQIESPIA 1122 >UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERL7_AMOA5 Length = 573 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 131/257 (50%), Positives = 186/257 (72%), Gaps = 1/257 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++NF+ +L++LA G +DP+IGR+KE+ER Q+L RRRKNN LL+GE GVGKTAIAEGLA Sbjct: 191 LDNFSRDLSKLAEEGKLDPIIGRKKEIERVAQILSRRRKNNALLIGEPGVGKTAIAEGLA 250 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 +I+QG V + + + SLD+ +L+AGTKYRG FE+R KA++ +L + ILFIDE+H Sbjct: 251 LQIMQGKVAKPLLGKRVVSLDVAALVAGTKYRGQFEERIKAIMNELVKSKQVILFIDELH 310 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 TI+GAG+A+G +DAAN++KP L+ G I+ IG+TT E+ EKD AL RRFQ + + Sbjct: 311 TIVGAGSAAGS-LDAANILKPALARGDIQCIGATTLSEYRQYIEKDGALTRRFQSVRVEP 369 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 +I E+++I+N LK YE +H V YT + ++A V+LA +YI++R LPDKAIDV+DE GA Sbjct: 370 TTIVESIEILNNLKDTYEEYHSVTYTPEVIKACVDLADRYISNRLLPDKAIDVMDEVGAS 429 Query: 409 ARLMPVSKRKKTVNVAD 425 + + K +AD Sbjct: 430 VHMHNIQVPSKIAKLAD 446 >UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. SE45 RepID=D0D9L8_9RHOB Length = 864 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 132/264 (50%), Positives = 189/264 (71%), Gaps = 2/264 (0%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 G +S G + ++ + +L + A G IDP+IGR++E+ R++QVL RR KNNP+L+ Sbjct: 146 GRTADSASAEEGYDALKKYARDLTEAAEQGRIDPIIGRDEEIRRSMQVLSRRTKNNPVLI 205 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 GE GVGKTAIAEGLA RI+ GDVPE + + + +LD+G+L+AG KYRG+FE+R K++LK+ Sbjct: 206 GEPGVGKTAIAEGLALRIIDGDVPESLRNKRLMALDMGALIAGAKYRGEFEERLKSILKE 265 Query: 274 LEQDTNS-ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFE 332 +E ILFIDE+HT++GAG G +DA+NL+KP L+ G++ +G+TT E+ E Sbjct: 266 IESAAGEIILFIDEMHTLVGAGKTDGA-MDASNLLKPALARGELHCVGATTLDEYRKHVE 324 Query: 333 KDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR 392 KD ALARRFQ + + EP++E+T+ I+ G+K KYE HH VR + A+ AA L+ +YI DR Sbjct: 325 KDPALARRFQPVMVQEPTVEDTISILRGIKEKYELHHGVRISDSALVAAATLSHRYITDR 384 Query: 393 HLPDKAIDVIDEAGARARLMPVSK 416 LPDKAID++DEA +R R+ SK Sbjct: 385 FLPDKAIDLMDEAASRLRMEVDSK 408 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 117/292 (40%), Positives = 176/292 (60%), Gaps = 21/292 (7%) Query: 331 FEKDRALARRFQKI-----DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 385 E D A R +K+ D+ E S E T Q + K + D++ +RA +E+A Sbjct: 431 LEDDAASKDRLEKLEKELADLEEKSAEMTAQW-QAERDKLASARDLKEQLDRLRAELEIA 489 Query: 386 VKYIN--------DRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 + N +P+ + + A +M ++ V I VV R IP Sbjct: 490 KREGNFAKAGELQYGKIPEIEKKLAEAEAAEGDVMV----EEAVRPEQIAEVVERWTGIP 545 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 + + +R+ L + D L V GQ++A++A+ A++ ARAGL E++P+GSFLF GPT Sbjct: 546 TSKMLEGEREKLLRMEDGLHKRVVGQNQAVKAVANAVRRARAGLNDENRPLGSFLFLGPT 605 Query: 498 GVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 GVGKTE+T +++ L ++R DMSE+ME+H+V+RLIGAPPGYVG+D+GG+LT+AV Sbjct: 606 GVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVR 665 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 + P+ V+L DE+EKAHPDVFN+LLQV+D+G LTD GR DF+ ++V+T+ Sbjct: 666 RRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTST 717 >UniRef50_Q4FY62 Serine peptidase, putative n=12 Tax=cellular organisms RepID=Q4FY62_LEIMA Length = 817 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 133/293 (45%), Positives = 191/293 (65%), Gaps = 3/293 (1%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 +V DI V+AR IP + S+R+ L ++ LK + GQD AIE++T ++++RA Sbjct: 472 SVTSKDIAEVIARATGIPVAQLMTSEREKLIHMDAELKKTIMGQDAAIESITNVVRISRA 531 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGA 536 GL +P+GSFLF GPTGVGKTEV L+K L + + R DMSEYMERH+V RLIGA Sbjct: 532 GLHSHKRPLGSFLFLGPTGVGKTEVCKSLAKFLFDDESFICRIDMSEYMERHSVHRLIGA 591 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG+++GG LT++V + P+ ++L DE EKAHP V NILLQV+D G LTD++GR+ DF Sbjct: 592 PPGYVGYEEGGELTESVRRRPYQIVLFDEFEKAHPSVSNILLQVLDEGHLTDSHGRRVDF 651 Query: 597 RNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 +N ++++T+N G R G ME++++ PEF NRLD+II F+ LS + Sbjct: 652 KNTIIILTSNIGADVIARLPEGKPSISAMPAVMEQVRQRLAPEFINRLDDIIMFNRLSRE 711 Query: 657 VIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 I +V+ ++Q L + ++LE S E +WL+ GY GARP+ R++Q Sbjct: 712 DIRSIVEILFAQVQKMLTEHNITLEESTEVYDWLSVNGYSAVYGARPLKRLVQ 764 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 130/251 (51%), Positives = 184/251 (73%), Gaps = 1/251 (0%) Query: 167 ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 E ++ + +L + AR G +DP++GRE+ + R IQV+ RR KNNP+L+GE GVGKTAI EG Sbjct: 100 EFLKKYARDLTEEARTGRLDPIVGREEVIRRTIQVVSRRTKNNPVLIGEPGVGKTAIVEG 159 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILFID 285 LA RIV+G+VPE + D +Y+LD+G+L+AG K+RG+FE+R K +LK +E ILFID Sbjct: 160 LAQRIVKGEVPESIKDRQVYALDMGTLVAGAKFRGEFEERLKGVLKDTIESHGKVILFID 219 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 E+HT++GAG++ G +DAANL+KP L+ G++ IG+TT E+ EKD ALARRFQ + Sbjct: 220 ELHTLVGAGSSGDGSMDAANLLKPSLARGELHCIGATTLDEYRQHIEKDAALARRFQSVL 279 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 +TEP++EET+ I+ G+K KYEAHH +A+ A + +Y+++R LPDKAID+IDEA Sbjct: 280 VTEPTVEETISILRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLSERRLPDKAIDLIDEA 339 Query: 406 GARARLMPVSK 416 +R RL SK Sbjct: 340 ASRLRLQQESK 350 >UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKR5_FIBSS Length = 855 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 154/389 (39%), Positives = 233/389 (59%), Gaps = 23/389 (5%) Query: 22 HEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 H ++ HL + L+ P A ++ ++ V LR LE F+ Q P + D + Sbjct: 24 HSYLGAAHLAVGLVEGPDATLKKLYKSKGVKPNELRGRLEPFV-QKIPRMEGVNP--DVE 80 Query: 80 PTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFIS 139 P R+L+ AV + R VT ++LVA+ + + + + +VV Sbjct: 81 PDSDLNRILRAAVQAARQVSRM-VTPGDLLVALMKFSGDRGLAKVFEDALGSTEVVE--- 136 Query: 140 HGTRKDEPTQSSDP-GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERA 198 T SDP N+EEQ+ ++ + L ++A G + P+IGRE+E+ R Sbjct: 137 --------TWLSDPFAGAANAEEQSP----LKLYGRELVEMAADGKLSPVIGREEEIRRV 184 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 I +L R+ KNNP LVGE GVGKTAI EGLA RI +GDVP+ + +++LD+ +L+AG K Sbjct: 185 ILILSRKTKNNPCLVGEPGVGKTAIVEGLAERIYRGDVPDALKGKKVFALDLSALMAGAK 244 Query: 259 YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRV 318 YRGDFE+R K+++ +E+D N+++FIDE+H I+GAG G +D N++KP L+ G++ Sbjct: 245 YRGDFEERLKSVIDAIEEDGNTLMFIDELHNIVGAGKTE-GSMDLGNMLKPKLARGELHC 303 Query: 319 IGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAV 378 IG+TT QE+ EKD AL RRFQ + ++EPS +E + I+ G+K ++AHH VR A+ Sbjct: 304 IGATTTQEYRKYIEKDSALERRFQPVQVSEPSEDEAISILRGIKDGFDAHHGVRLHDNAL 363 Query: 379 RAAVELAVKYINDRHLPDKAIDVIDEAGA 407 AAV+L+ +YI+DR LPDKAID+IDEA + Sbjct: 364 VAAVKLSNRYISDRFLPDKAIDLIDEAAS 392 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 141/311 (45%), Positives = 200/311 (64%), Gaps = 15/311 (4%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VV+R IP + + ++ L +L +RL V GQD+A+EA++EAI R+GL E+ Sbjct: 531 IALVVSRWTGIPVTKLCEGEKAKLLHLDERLHARVIGQDEAVEAVSEAILRNRSGLSREN 590 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIEL-------LRFDMSEYMERHTVSRLIGAPP 538 P+GSFLF GPTGVGKTE L+KAL +EL +R DMSEYME+H+VSRLIGAPP Sbjct: 591 APIGSFLFLGPTGVGKTE----LAKALAVELFDSENALVRIDMSEYMEKHSVSRLIGAPP 646 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+++GG LT+AV HP+ V+LLDEIEKAHPDVFN LLQV+D+G LTD GR +F+N Sbjct: 647 GYVGYEEGGQLTEAVRTHPYCVILLDEIEKAHPDVFNTLLQVLDDGRLTDGKGRTVNFKN 706 Query: 599 VVLVMTTNAGVRETERKSI----GLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 +++MT+N G + + G Q D ++ F PEF NRLD ++ F LS Sbjct: 707 TLILMTSNLGAEKFRLSAANAKNGEPPQVALADVEADLHAFFRPEFLNRLDEVLVFQSLS 766 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 I ++V +L + ++ + L +S A + +AE Y GARP+ R I+ N+++ Sbjct: 767 KKQIREIVKLKFADLANRAARQDLVLTLSDAALDAIAEGAYQPEFGARPIQRYIERNIER 826 Query: 715 PLANELLFGSL 725 PL++ +L G++ Sbjct: 827 PLSHAILSGTV 837 >UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit clpA CD4B,chloroplast, putative, expressed n=5 Tax=cellular organisms RepID=Q53N47_ORYSJ Length = 918 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 136/283 (48%), Positives = 199/283 (70%), Gaps = 2/283 (0%) Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 + TNL +LA G +DP++GR+K+++ +Q+L RR KNNP L+GE GVGKTAIAEGLA I Sbjct: 269 YGTNLTKLAEEGKLDPVVGRQKQIDHVVQILSRRTKNNPCLIGEPGVGKTAIAEGLAQLI 328 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 GDVPE + T+ SLD+G LLAGTKYRG+ E+R K +L++++Q+ ILF+DE+HT++ Sbjct: 329 ATGDVPETIQQKTVISLDMGLLLAGTKYRGELEERLKNILEEIKQNGEIILFLDEVHTLV 388 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 AG+A G +DAAN+ KP L+ G+++ IG+TT E+ EKD AL RRFQ + I E ++ Sbjct: 389 TAGSAEGA-IDAANIFKPALARGELQCIGATTINEYRKHIEKDAALERRFQPVKIPESTV 447 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 +ETV I+ GL+ +Y+ HH V+YT +A+ AA EL+ K+I DR LPDKAID++DEAG+ RL Sbjct: 448 DETVGILKGLRERYQGHHKVQYTDEALVAAAELSHKHIRDRFLPDKAIDLMDEAGSIVRL 507 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD 454 ++ K + V D+E+ + + + ++S + K L D Sbjct: 508 RN-AQCKPSKKVNDLEAELKKTLKEKNDAISIQNFRRAKQLRD 549 Score = 245 bits (625), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 133/327 (40%), Positives = 197/327 (60%), Gaps = 13/327 (3%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 D+ ++R +P VS + L L + L V GQ +A+ A++ AI+ AR GL H Sbjct: 583 DVRHAISRWTGVPLHKVSMDESRKLLKLEEALHRRVVGQGEAVAAVSRAIRRARLGLKHP 642 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQL-------SKALGIELLRFDMSEYMERHTVSRLIGAP 537 +PV S +FAGPTGVGK+E+ L S++ ++R DMSEYME+H V+RL+G+P Sbjct: 643 GRPVASLVFAGPTGVGKSELAKALAAYYYGSSESEEAAMVRLDMSEYMEKHAVARLVGSP 702 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYV +GG LT+AV + PHAV+LLDE+EKAH DVF++LLQV+D+G LTD GR DF+ Sbjct: 703 PGYVWHGEGGQLTEAVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGRLTDGKGRTVDFK 762 Query: 598 NVVLVMTTNAG----VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHL 653 N ++VMTTN G V + N+ +E+K+ F PEF NRLD +I F L Sbjct: 763 NTLIVMTTNIGSSLIVNNGGDGAAAAGRIKNTV--TDEMKRHFRPEFLNRLDEVIMFQPL 820 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + ++ + E ++ +KG+ L+V+ + R + E+G+D + GARP+ R + L+ Sbjct: 821 TELEVGKIAGIMLEEFAGRVREKGIKLKVTDKFRELVVEEGFDPSYGARPLRRAVVRLLE 880 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKN 740 LA ++L G + +G V V D N Sbjct: 881 DTLAEKMLAGEVREGDSVIVDADSAGN 907 >UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Bacteria RepID=C2MCW4_9PORP Length = 1011 Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 139/284 (48%), Positives = 195/284 (68%), Gaps = 3/284 (1%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ F TNLNQLA+ G +DP+IGR KELER +LCRR+KNNP+L+GE+GVGKTA+AEGLA Sbjct: 333 LDAFATNLNQLAKDGKLDPMIGRAKELERITHILCRRQKNNPVLIGEAGVGKTAVAEGLA 392 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 + + +V + +YS+D+ +LAGT+YRGDFE+RFKALLK+ E N+IL DEIH Sbjct: 393 QLLARDEVSYKLRGKVLYSVDLAQMLAGTRYRGDFEERFKALLKEAEMLGNTILLFDEIH 452 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 T++GAG+ G +DA+N++KP L+ G I+VIG+TT E+ EK+ ALARRFQK+ I Sbjct: 453 TLMGAGSTEGS-MDASNMLKPALARGTIQVIGATTLDEYRRTIEKNGALARRFQKVMIEP 511 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 + EET++I+ L+ +YE H V Y+ +A+ A V L +YI DR+ PDKAIDV+DE GA Sbjct: 512 NTPEETLEILRQLRGRYEEFHHVHYSDEALIAMVRLTNRYIYDRYFPDKAIDVLDEVGAS 571 Query: 409 ARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNL 452 L K ++ VA + + +K+V +S+ DT L Sbjct: 572 MHLK--GKLGESDKVASLRQQLRTYRASRDKAVRESNYDTAMTL 613 Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 123/309 (39%), Positives = 199/309 (64%), Gaps = 11/309 (3%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + V+ ++ +P ++SQ + L+ + LK +V GQD AI + +AI+ R GLG + Sbjct: 647 VAKTVSMMSGVPISNISQEEHAKLRQMRQTLKDIVIGQDDAINKVVKAIQRNRLGLGSDK 706 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+GSFLF GPTGVGKT + +L++ L + L+R DMSEYME VSRL+GA PGYVG Sbjct: 707 RPIGSFLFLGPTGVGKTYLAKKLAELLFDDEDALIRIDMSEYMESFNVSRLVGAAPGYVG 766 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 +D+GG LT+ V + P++V+L DE+EKAHPDV+NILLQ++D+G +T +G F+N V++ Sbjct: 767 YDEGGQLTEQVRRKPYSVVLFDELEKAHPDVYNILLQILDDGFITAADGTHVSFKNTVII 826 Query: 603 MTTNAGVRETE--------RKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 +T+N G R+ + R+ + L + +++KK F+PEF NRLD+ I+F L Sbjct: 827 LTSNIGTRQLKDFGAGVGFRQEVQLSQTEQEALLSKQLKKHFSPEFLNRLDDTIYFASLE 886 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + I ++VD + + ++ ++G +L V+ A++ LA+ G+D GARP+ R ++ ++ Sbjct: 887 KEDIRKIVDVELRPIMARITEQGYNLVVTPSAKDKLADVGFDLEYGARPLRRALRHWIED 946 Query: 715 PLANELLFG 723 L + +L G Sbjct: 947 KLTDLILDG 955 >UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=CLPB_HELPJ Length = 856 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 160/424 (37%), Positives = 250/424 (58%), Gaps = 20/424 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 + +L +L+ A A A H++ +T H+L A+L+N +AL+ VD+ AL+ ++ Sbjct: 7 MTDQLHETLDSAIALALHHKNAEVTPMHMLFAMLNNSQGILIQALQKMPVDIEALKLSVQ 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + + V S++ + Q + + L+ A + G + + L+A + ES Sbjct: 67 SELNKFAKVSQISKQ--NIQLNQALIQSLENAQGLMAKRGDSFIATDAYLLANMNLFESV 124 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 L E+ + RK Q + S E +E F +L Q Sbjct: 125 LKPYLDTKELQK------TLESLRKGRTIQDKNDDSNL---------ESLEKFGIDLTQK 169 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A +DP+IGR++E+ R +Q+L R+ KNNP+L+GE GVGKTA+ EGLA RIV +VP+ Sbjct: 170 ALENKLDPVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKT 229 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + + +LD+ L+AG KYRG+FE+R K +++++++ N ILFIDEIHTI+GAGA+ GG Sbjct: 230 LLNKRVVALDLSLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGG 289 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G++ IG+TT +E+ FEKD AL RRFQ I + EPSI E +QI+ Sbjct: 290 -MDAANILKPALARGELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILR 348 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLK E HH++ A+ A+ +L+ +YI DR LPDKAID+IDE A+ ++ S+ K Sbjct: 349 GLKETLETHHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKMQMESEPAK 408 Query: 420 TVNV 423 +V Sbjct: 409 LSSV 412 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 136/324 (41%), Positives = 209/324 (64%), Gaps = 11/324 (3%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 +I +V++ IP + + QS+++ + N+ L+ V GQ+KA++A+ +AIK +AGL Sbjct: 535 NIAEIVSQWTHIPVQKMLQSEKNRVLNIESELQKRVVGQEKALKAIAKAIKRNKAGLSDS 594 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYV 541 +KP+GSFLF GPTGVGKTE L++ L L+R DMSEYME+H +SRLIGA PGYV Sbjct: 595 NKPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEKHAISRLIGAAPGYV 654 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+++GG LT+AV + P++V+LLDE+EKAHPDVFN+LLQV+D G LTD+ G + DF+N +L Sbjct: 655 GYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTIL 714 Query: 602 VMTTN--AGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 ++T+N +G E L D E +++ F PEF NRLD II F+ L + I Sbjct: 715 ILTSNVASGALLEE----DLSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAII 770 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719 +V +Q + ++G+++ + ++A+ +AE G+DR GARP+ R + + ++ LA Sbjct: 771 NIVGILFENVQKKALERGINITLDEKAKELIAEAGFDRFYGARPLKRALYEMVEDKLAEL 830 Query: 720 LLFGSLVDGGQVTVALDKEKNELT 743 +L + + +VA E NE+ Sbjct: 831 ILEDKIKEND--SVAFVVENNEIV 852 >UniRef50_B9Y438 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y438_9FIRM Length = 665 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 177/595 (29%), Positives = 308/595 (51%), Gaps = 51/595 (8%) Query: 17 AREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEE 74 AR+ ++ F+ EHLL+ +L + + ++ L + L+++++ EE Sbjct: 20 ARQMKNTFIGTEHLLIGILQTDHSALQKLLSERGITAEQLKEDIQVLFGFN------EEE 73 Query: 75 ERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDV 134 R T+ T + Q +L++ + S +T + + + A+ LLR+++V D+ Sbjct: 74 TRQTEYTQTVQEILEKCLVEAARSTPPVITLKMLTRTLLETPNNVASELLRRYDV---DI 130 Query: 135 VNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKE 194 I R+D + +S E + M N +N+ + R+ + Sbjct: 131 AGLIVELNRQDIDSLNS-------IRELRNLNQWMANRPSNI------------VERQAQ 171 Query: 195 LERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 + I++LCR+ K NPLL+G+ GVGKTA+ E LA I QG+VP+ + I+ L + L+ Sbjct: 172 MNSIIRILCRKEKANPLLLGDPGVGKTALVEQLAKSIDQGEVPDCLRGSVIFELSVNGLV 231 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 AGTKYRG+FE++ + +L L Q ILFIDEIH IIGAG A G +D A ++KP+L+ G Sbjct: 232 AGTKYRGEFEEKIQKILDALRQFPQVILFIDEIHQIIGAGKAEGS-IDVAGVLKPVLARG 290 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT 374 +IR IG+TTY E+ EKDRAL RRFQ + I EP ++ ++I P+YE HH +++ Sbjct: 291 EIRCIGATTYDEYLKFIEKDRALQRRFQPVMIEEPDLDSARRMIEAKIPEYEQHHQIQFP 350 Query: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIA 434 + V +E ++ R LPDKA+DVID A A AR+ + TV D++ ++ ++ Sbjct: 351 MELVGPLMESTQYFMPSRKLPDKALDVIDLACASARM----DHRSTVAQRDVDQILEQLT 406 Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 +P + + DR + RL+ + GQ++ + + + ++ G+ + +P+G +L Sbjct: 407 DVPLQDRCRKDR-----VMQRLRRELIGQEEILTQIDQQLQWMELGVVQD-RPLGVWLLC 460 Query: 495 GPTGVGK---TEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG-GLLT 550 G K +V QL + DM +Y + R + G DQ L Sbjct: 461 GKQVSLKQRLAKVLAQLYFGQNDRRIEVDMMDYQDSQAGYRFVH------GQDQQYSLWL 514 Query: 551 DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTT 605 + + + P+++L + ++ A P+ IL + ++ G + + GRK D R+ ++++ T Sbjct: 515 EKLRRSPYSLLFIRNLDAARPECAAILRKGIEQGLIEEEAGRKVDLRHCLILLDT 569 >UniRef50_B3EPU4 ATPase AAA-2 domain protein n=4 Tax=Chlorobiaceae RepID=B3EPU4_CHLPB Length = 440 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 134/329 (40%), Positives = 216/329 (65%), Gaps = 10/329 (3%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K+ ++ DI +V++ IP + QS+R L + L V GQDKA++A++EA+K + Sbjct: 101 KEEIDAGDIADIVSKWTGIPVSKMLQSERQKLLLIDQELHKRVIGQDKAVQAVSEAVKRS 160 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 RAG+G E +P+GSF+F GPTGVGKTE+ L++ L + ++R DMSEYME H+VSRL+ Sbjct: 161 RAGMGDEKRPIGSFIFLGPTGVGKTELARTLAEYLFDDEDAMIRIDMSEYMESHSVSRLV 220 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGY+G+++GG LT+AV + P +V+LLDEIEKAHPDVFNILLQ++D+G LTD+ G Sbjct: 221 GAPPGYIGYEEGGQLTEAVRRRPFSVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGHTV 280 Query: 595 DFRNVVLVMTTNAGVR--ETERKSIGLIHQDNSTDAMEE-----IKKIFTPEFRNRLDNI 647 +F+N +++MT+N G + ++E + + ++D + +++ +K+ PEF NR+D + Sbjct: 281 NFKNTIIIMTSNIGAQLIQSEMEKMDGENRDAVLETLQDKLFLLLKQQVKPEFLNRIDEV 340 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 I F L+ + ++V + ++ +SL + A WL+ G+D A GARP+ RV Sbjct: 341 ILFTPLTRKDLEKIVTIQFNSINKLALRQNISLHLDDSALTWLSNAGFDPAFGARPLKRV 400 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALD 736 +Q ++ L+ +L G++ +G V V ++ Sbjct: 401 MQRSITNKLSEMILEGTVREGDSVQVTVE 429 >UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HY88_9ACTO Length = 861 Score = 268 bits (685), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 164/410 (40%), Positives = 242/410 (59%), Gaps = 23/410 (5%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALL---SNPSAREALEACSVDLVALRQELEAFIEQT 65 ++N A RA H +T HLLLALL N + + L A D A+R A E+ Sbjct: 21 AINAAGNRAVTEGHPDLTPAHLLLALLQGQDNENIVDLLAAVDADQAAVR----AGAEKA 76 Query: 66 TPVLP--ASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 LP A QP V+ A + G ++ ++LV I ++ A L Sbjct: 77 LGSLPSVAGSTVAPPQPNRDLLAVIADAQSRAKDLGDEYLSTEHLLVGIAAKGGPAAEVL 136 Query: 124 LRKHEVSRLDVVNF-ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 + + + F + G R+ ++DP Q + +E F T+ AR Sbjct: 137 TGQGATPKKLIDAFQKARGGRR---VTTADPEGQYKA---------LEKFGTDFTAAARD 184 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 G +DP+IGR++E+ R +QVL RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVPE + D Sbjct: 185 GKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKD 244 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASGGQV 301 + SLD+ +++AG KYRG+FE+R K +L ++ + D I FIDE+HT++GAGA + Sbjct: 245 KRLVSLDLSAMVAGAKYRGEFEERLKTVLAEIRDSDGQIITFIDELHTVVGAGAGGDSSM 304 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DA N++KP+L+ G++R++G+TT E+ EKD AL RRFQ++ + EP++E+T+ I+ GL Sbjct: 305 DAGNMLKPMLARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDTIAILRGL 364 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 K +YEAHH V+ A+ AA L+ +YI R LPDKAID++DEA +R R+ Sbjct: 365 KGRYEAHHKVQIADSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRM 414 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 112/255 (43%), Positives = 162/255 (63%), Gaps = 21/255 (8%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K+ V DI VA IP + + + L + + L + GQ +A+ A+++A++ Sbjct: 541 KEEVGADDIADTVAAWTGIPAGRLLEGETQKLLRMEEELGKRLIGQGEAVRAVSDAVRRT 600 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 RAG+ +P GSFLF GPTGVGKTE+ L+ L + ++R DMSEY E+HTVSRL+ Sbjct: 601 RAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVSRLV 660 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++GG LT+AV + P++V+LLDE+EKAHP+VF+ILLQV+D+G LTD GR Sbjct: 661 GAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTV 720 Query: 595 DFRNVVLVMTTNAG--------VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDN 646 DFRN +LV+T+N G ETE+K +E ++ F PEF NRLD+ Sbjct: 721 DFRNAILVLTSNLGSQFLVDPITSETEKKE----------QVLEVVRASFKPEFLNRLDD 770 Query: 647 IIWFDHLSTDVIHQV 661 ++ F L+ D + ++ Sbjct: 771 LVVFSALTKDELGRI 785 >UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi RepID=D2VCN5_NAEGR Length = 891 Score = 268 bits (685), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 128/258 (49%), Positives = 183/258 (70%), Gaps = 1/258 (0%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 G + +S++ G + + + N+ +AR G DPLIGR+KEL R I+VL RR KNN L+ Sbjct: 156 GKKVDSKQAETGYDALNRYGVNMVDMARQGKYDPLIGRDKELARMIRVLSRRTKNNCCLL 215 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 E GVGK+A+ EGLA RI GDVP+ + +YSLD+GS++AG+K+RG+FE+R K++LK+ Sbjct: 216 AEPGVGKSALVEGLAMRIATGDVPKNLQ-TQLYSLDLGSMVAGSKFRGEFEERLKSILKE 274 Query: 274 LEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEK 333 +E+ + ILFIDEIHT+ GAG+ +DA+N+IKPLL+ G +R+IG+TT E+ EK Sbjct: 275 VEESGDVILFIDEIHTLSGAGSTGDNSLDASNMIKPLLARGVLRLIGATTPTEYRKYIEK 334 Query: 334 DRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH 393 D AL RRFQ + + EP+++ET+ I+ GLK +YEAHH VR A+ A L+ +YI R+ Sbjct: 335 DAALERRFQPVYLAEPNVQETISILRGLKSRYEAHHGVRILDSAIVEAARLSARYIQGRY 394 Query: 394 LPDKAIDVIDEAGARARL 411 PDK+ID+IDEA A R+ Sbjct: 395 NPDKSIDLIDEASANIRV 412 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 137/339 (40%), Positives = 210/339 (61%), Gaps = 32/339 (9%) Query: 417 RKKTVNVADIES----------VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKA 466 RK VN A++ S V+AR IP + +++S++D + L +RL V GQ+ A Sbjct: 540 RKNGVNSANMTSDVVTPEQINEVIARWTGIPVQRLNESEKDKVLKLEERLMKRVVGQEDA 599 Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL-------LRF 519 I++L+E+I ++AGL + +KP+GSFLF G +GVGKT L+K++ EL +R Sbjct: 600 IKSLSESIIRSKAGLSNPNKPIGSFLFLGSSGVGKT----YLAKSIAYELFDDEKHMVRI 655 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DMSE ME+H+VSRLIG+P GYVG+ LT+ V + P+ V+L DEIEKAHP V N+LLQ Sbjct: 656 DMSELMEQHSVSRLIGSPAGYVGYSDDNQLTEPVRRQPYTVVLFDEIEKAHPRVLNVLLQ 715 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA-----MEEIKK 634 ++D+G LTD GR DF+N V++MT+N G + L DN+ + M E+++ Sbjct: 716 LLDDGRLTDGQGRTVDFKNTVIIMTSNIGSKHF------LTMNDNNKETVKKQVMNEVRQ 769 Query: 635 IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKG 694 FTPEF NRLD+I++F+ L++ + VV + L +L ++ +S+++ A + +G Sbjct: 770 HFTPEFLNRLDDILFFEPLTSKHLVNVVRLQMESLTERLKERDISIDIRDSACELVISEG 829 Query: 695 YDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 +D GARP+AR IQ ++ L+ +L G L DG Q+ + Sbjct: 830 FDPNYGARPLARFIQKHIVTELSKLMLKGELRDGSQIVI 868 >UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/mecB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8V8_COPPD Length = 805 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 139/332 (41%), Positives = 208/332 (62%), Gaps = 19/332 (5%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 TV+ D+ ++ IP + D+ L + D L + GQ++A+ A+ +AI+ +R Sbjct: 464 TVSFDDVAYTISSWTGIPVAKLRLDDKKKLLEIEDYLHRRIVGQNEAVTAVAKAIRRSRT 523 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGA 536 GL + +P+G FLF GPTGVGKTE+ L++ + E L+R DMSEYME+ VSRL+GA Sbjct: 524 GLQDDRRPIGVFLFLGPTGVGKTELARALAEFMFGEEEALIRIDMSEYMEKFNVSRLVGA 583 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG+++GG LT+AV + PH+++LLDEIEKAHPDVF+ILLQ+ ++G LTD GR DF Sbjct: 584 PPGYVGYEEGGQLTEAVRRKPHSIVLLDEIEKAHPDVFDILLQIFEDGRLTDGQGRVVDF 643 Query: 597 RNVVLVMTTNAGVRE-TERKSIGLIHQDNSTDAMEE-----IKKIFTPEFRNRLDNIIWF 650 RN +++MT+N G R+ + +IG + + ME +KK F PEF NR+D I+ F Sbjct: 644 RNTIIIMTSNLGSRDISAGTTIGFLKDQVKFENMENLVMDAVKKFFKPEFLNRIDEIVVF 703 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 HL+ D + Q+V + EL QL + +++++S + + +GY+ GARP+ R IQ Sbjct: 704 HHLTNDDLRQIVGIMMDELNKQLRSQNLTVKISDRMLDQIITEGYEPRFGARPLRRAIQR 763 Query: 711 NLKKPLANEL---------LFGSLVDGGQVTV 733 +K PLA + LF VD G++T+ Sbjct: 764 LVKDPLAEYMLKHENISGTLFMDFVD-GEITI 794 Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 170/415 (40%), Positives = 244/415 (58%), Gaps = 28/415 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELEA 60 ++E +L A AR F+ EHL+LA+L+ + A +++ D +R +E Sbjct: 5 FSEEARKALKDAQEEARRLNSSFVGREHLVLAMLNEDTRAYSIIDSLGADADNIRSSIE- 63 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQ--RVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 P+ AS + P LS + R+L A + + V ++L+AI E S Sbjct: 64 ----DIPMPMASSLQ---YPELSSEARRLLDIASEEARKLAHSYVGTEHLLLAILKEP-S 115 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 + + +L ++ V DV RK + + G Q E+ ++ F+ +L Sbjct: 116 RVSSILNENGVFYDDV--------RK----KVIEMGEQEPEEKGKTKTPVLDKFSKDLVS 163 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 LA G +DP+IGRE EL R I++L RR KNNP+L+GE GVGKTAI EGLA RI G VP Sbjct: 164 LAEKGKLDPVIGRETELNRIIEILSRRIKNNPILLGEPGVGKTAIVEGLAERIASGKVPY 223 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS--ILFIDEIHTIIGAGAA 296 + + LDI S++AGTKYRG+FE+R K +L ++++ TN ILFIDEIHT+IGAGAA Sbjct: 224 SLKKKRVVQLDISSIVAGTKYRGEFEERMKKILDEVKR-TNGQVILFIDEIHTVIGAGAA 282 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 G +DAA+++KP L+ G+I+VIG+TTY ++ E+D A RRFQ + + EPS+EET Q Sbjct: 283 EGA-IDAASILKPSLARGEIKVIGATTYDDYRKYIERDPAFERRFQPVQVEEPSLEETKQ 341 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 I+ GL+P YE H+V+ A+ AA L KY+ R LPDKAID +DE A+ RL Sbjct: 342 ILIGLRPIYEKFHNVKIADDAIEAAAILTKKYVKQRFLPDKAIDALDETCAKVRL 396 >UniRef50_B5ZBN7 Chaperone protein ClpB n=44 Tax=cellular organisms RepID=B5ZBN7_UREU1 Length = 704 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 138/307 (44%), Positives = 206/307 (67%), Gaps = 8/307 (2%) Query: 161 EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 +Q +E F NLNQ IDP+IGR++E+ R I++L R+ KNNP+L+GE GVGK Sbjct: 4 KQKNTSNPLEEFGRNLNQEILDNKIDPIIGRDEEIRRTIEILSRKTKNNPVLIGEPGVGK 63 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-N 279 TAI EGLA+RIV DVP + D TI L + SL+AG Y+G FE+R A+LK++++ N Sbjct: 64 TAIVEGLAYRIVHKDVPSNLLDKTIIELSLSSLIAGASYQGQFEERINAILKEVKKSNGN 123 Query: 280 SILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 ILFIDEIH I+G G G +D AN++KP+++ G+I++IG+TT E+ EKD+AL R Sbjct: 124 IILFIDEIHQIVGMGRNQGSNMDVANILKPMMARGEIKLIGATTLDEYRLYIEKDQALER 183 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 399 RF K+ + +P+I+ET+ I+ GLKP++EA H ++ A+ AAV L+ +YINDR+LPDKAI Sbjct: 184 RFTKVLVNKPTIQETLTIMRGLKPRWEAFHGIKIHDNALIAAVNLSERYINDRNLPDKAI 243 Query: 400 DVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRD--TLKNLGDRLK 457 D+IDEA A+ + S + + + +I+ + + EK+ +S++D ++K L D L+ Sbjct: 244 DLIDEAAAKIKTQINS---QPIYLDEIKRDLQHLQ--TEKAALESEKDEKSIKRLNDILE 298 Query: 458 MLVFGQD 464 + QD Sbjct: 299 KIKLKQD 305 Score = 251 bits (641), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 122/321 (38%), Positives = 202/321 (62%), Gaps = 11/321 (3%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 +I V+AR IP + ++ L +L R+ V GQD+A++ +++A+ RAG+ + Sbjct: 389 EIADVIARATGIPLNHLLADEKTKLLSLNKRIAAHVIGQDEAVKLISDAVIRGRAGINNP 448 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYV 541 ++P+GSFLF GPTGVGKTE+ L+K L L+RFDMSEYME+H+VS+L+GAPPGYV Sbjct: 449 NQPIGSFLFLGPTGVGKTELAKTLAKELFDSQKALIRFDMSEYMEKHSVSKLVGAPPGYV 508 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G++ GLLT++V + P+++LL DEIEKAHPDV NILLQ++D G++ D + +F+N ++ Sbjct: 509 GYENAGLLTESVKRKPYSILLFDEIEKAHPDVLNILLQILDEGSVKDAKNNEINFKNTII 568 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 +MT+N G + ++N T+A+ E++K F PE NR+ II+F+ LS +VI ++ Sbjct: 569 IMTSNVGAEA--------LLENNKTNALMELQKTFKPEILNRISEIIFFNKLSKEVIFKI 620 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 + + EL L ++ S++ + + ++ Y GARP+ R I +L+ +A ++ Sbjct: 621 SENLLKELSDLLAKQDYSIKFNDNIAKIMVDEAYSSNYGARPLKRWITKHLENEIAKLII 680 Query: 722 FGSLVDGGQVTVALDKEKNEL 742 + + D+E +++ Sbjct: 681 ENRITKNRNYEINYDREADQV 701 >UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q3L1D0_VITVI Length = 911 Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 154/395 (38%), Positives = 237/395 (60%), Gaps = 20/395 (5%) Query: 22 HEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 H +T H+ +AL++ N R+A+ + A +E + LP D Sbjct: 26 HAQLTPLHVAVALITDHNGILRQAIIGAGGNEEAA-NSVERVFNKALKKLPTQSPPPDEI 84 Query: 80 P-TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFI 138 P + + +V++RA +S G + +++ + ++SQ LL++ VS Sbjct: 85 PVSTTLIKVVRRAQSSQKSRGDTHLAVDQLILGLL--EDSQIGDLLKEAGVS-------- 134 Query: 139 SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA-RVGGIDPLIGREKELER 197 T + + G + E A G+ + T L + G +DP+IGR++E+ R Sbjct: 135 ---TSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLVEQAGKLDPVIGRDEEIRR 191 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 I++L RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVP +A+ + +LD+G+L+AG Sbjct: 192 VIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAEVRLIALDMGALVAGA 251 Query: 258 KYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 KYRG+FE+R K++LK++E+ + ILFIDEIH ++GAG G +DAANL KP+L+ G++ Sbjct: 252 KYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTEGS-MDAANLFKPMLARGQL 310 Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAK 376 R IG+TT +E+ EKD A RRFQ++ + EPS+ +T+ I+ GLK +YE HH VR + Sbjct: 311 RCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYEGHHGVRIQDR 370 Query: 377 AVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 A+ A +L+ +YI RHLPDKAID++DEA A R+ Sbjct: 371 ALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRV 405 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 138/307 (44%), Positives = 196/307 (63%), Gaps = 4/307 (1%) Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 +TV I VV+R IP + Q+D++ L L +RL V GQD+A+ A+ EA+ +R Sbjct: 530 ETVGPEQIAEVVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSR 589 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIG 535 AGLG +P GSFLF GPTGVGKTE+ L++ L + L+R DMSEYME+H+VSRLIG Sbjct: 590 AGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIG 649 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGYVG D+GG LT+AV + P++V+L DE+EKAH VFN LLQV+D+G LTD GR D Sbjct: 650 APPGYVGHDEGGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVD 709 Query: 596 FRNVVLVMTTNAGVRETERKSIG-LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 F N V++MT+N G +G QD M+E+++ F PE NRLD I+ FD LS Sbjct: 710 FTNTVIIMTSNLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLS 769 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 D + +V + ++ +L ++G++L V+ A + + + YD GARP+ R ++ + Sbjct: 770 HDQLRKVARLQMKDVASRLAERGIALAVTDAALDVVLAESYDPVYGARPIRRWLEKKVVT 829 Query: 715 PLANELL 721 L+ L+ Sbjct: 830 ELSKMLI 836 >UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 Tax=Helicobacter RepID=C3XMZ6_9HELI Length = 857 Score = 265 bits (677), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 161/416 (38%), Positives = 248/416 (59%), Gaps = 26/416 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 L L+ +L + A ++++ + HL A+L+N S+ +AL ++D AL ELE Sbjct: 7 LTNTLQETLEQGASLALHNKNQEIEPIHLFWAMLTNTSSLLNQALNRLNIDKTAL--ELE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLV----AIFSE 115 A + LP S T+ L R L A+ Q+ G G + + + + Sbjct: 65 A--KSIASALPQSSSV--TKENLKISRNLSDALN--QADGLATKNGDSYIALDTFILANL 118 Query: 116 QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 QE L K LD+ + ++ G++ +S+ E +E F + Sbjct: 119 QEPTIRNLFSKF----LDINEL-------KKTFEAMRAGAKIDSQSADENLESLEKFGID 167 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L + A G +DP+IGR++E+ +Q+L R+ KNNP+L+GE GVGKTA+ EGLA RIV+ + Sbjct: 168 LTKKAIEGKLDPVIGRDEEITHMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVKKE 227 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VP + + + +LD+ +L+AG KYRG+FE R K ++ ++++ N ILFIDEIHTI+GAGA Sbjct: 228 VPLSLQNKRVIALDMSALVAGAKYRGEFEDRLKKVIDEVKKSGNVILFIDEIHTIVGAGA 287 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 + GG +DAAN++KP L+ G++ IG+TT +E+ FEKD AL RRFQ + + EP++ E + Sbjct: 288 SEGG-MDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQPVMLNEPNVNEAL 346 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 QI+ G+K + EAHH+V T A+ AA +L+ +YI DR LPDKAID+IDEA A ++ Sbjct: 347 QILRGIKERLEAHHNVTITDSALVAAAKLSSRYITDRFLPDKAIDLIDEAAAELKM 402 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 131/310 (42%), Positives = 203/310 (65%), Gaps = 6/310 (1%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I +V++R +IP K + Q ++D + + + LK V GQD A+ A+ AIK +AGL + Sbjct: 538 IAAVISRWTQIPIKKMLQDEKDKILGIEEELKKDVVGQDNALHAIARAIKRNKAGLSELN 597 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+GSFLF GPTGVGKTE L++ L L+R DMSEYME+H SRL+GAPPGYVG Sbjct: 598 RPIGSFLFLGPTGVGKTESAKTLARFLFDSEKNLIRIDMSEYMEKHAASRLVGAPPGYVG 657 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 +++GG LT+AV + P++V+L DEIEKAHPDVFN+LLQV+D+G LTDN G DFRN +++ Sbjct: 658 YEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNMLLQVLDDGRLTDNKGVTIDFRNTIII 717 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 662 +T+N S L ++ + E +K F PEF NRLD+II F+ L + I +V Sbjct: 718 LTSNIASNAIMEIS-DLTEREKAVK--EALKGYFKPEFLNRLDDIIIFNPLGLEQITSIV 774 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 + +Q ++ ++ +++ + + A+ ++A+ G+D GARP+ R + + ++ LA+ +L Sbjct: 775 EILFKTIQKKVQERDINVTLEESAKEFIAKVGFDPIYGARPLKRALYEEIEDRLADLILQ 834 Query: 723 GSLVDGGQVT 732 + +G +V+ Sbjct: 835 DKIKEGSKVS 844 >UniRef50_Q03X61 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=2 Tax=Leuconostoc mesenteroides RepID=Q03X61_LEUMM Length = 632 Score = 265 bits (676), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 190/583 (32%), Positives = 303/583 (51%), Gaps = 85/583 (14%) Query: 191 REKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI 250 RE R + L ++ +N PLLVG GVGKTAI E LA +++ V + + + + Sbjct: 36 RESITRRIMVSLMKQIQNAPLLVGLPGVGKTAIVEDLARQLLSTSVSSLKGKHLV-QISL 94 Query: 251 GSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL-FIDEIHTIIGAGA-ASGGQVDAANLIK 308 +L+ + F +F+A++ +L + ++++ FIDEIH I+G GA SG +DA N+IK Sbjct: 95 ANLMKSSDGES-FAHKFQAIIDELIANKDTVIAFIDEIHQIVGTGAETSGSSLDAGNIIK 153 Query: 309 PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH 368 P LS +++IG+TT +EF +D AL RRF I++ E S E+T +++ K + + Sbjct: 154 PALSRDDLQIIGATTTKEFHEYVARDGALMRRFDLIEVPELSFEQTKNVLS--KVALQLN 211 Query: 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIES 428 + + + L+ +YI DR+ P+KAI ++D A + ARL + T++ D+ + Sbjct: 212 NGIEVPETVQDRIMALSQRYITDRYFPEKAIMLLDGALSVARL----DNRPTLSNQDVAT 267 Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 ++ +PE ++Q+ + L NL RLK V GQD A+E + + AGL KP Sbjct: 268 IIHDDYHVPEYVINQTTDERLLNLLPRLKSQVIGQDTALEKVAMKLTNREAGLADTSKP- 326 Query: 489 GSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEY------MERHTVSRLIGAPPG 539 SFLF GPTGVGKTE QL+ L +RFDMSE+ +ER Sbjct: 327 ESFLFMGPTGVGKTETAKQLALNLFGNKQNFIRFDMSEFKFAGTSLERFK---------- 376 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 DQ LT V P+AVLLLDEIEKA P+V ++LLQV+D+G L+D GR +F+++ Sbjct: 377 ----DQ---LTTRVRHTPYAVLLLDEIEKADPEVMDLLLQVLDDGRLSDEYGRVINFKDL 429 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKI----------------FTPEFRNR 643 ++VMTTN+G + ++++D +DA++E KK + PEF R Sbjct: 430 IIVMTTNSG-------ATAVMNRDAKSDAVKEDKKRQANFEEQLEIALQSDGYRPEFIAR 482 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSL----------------------- 680 + II FD L + ++V+ + L + + G ++ Sbjct: 483 IGAIIVFDVLKMADMVRIVELKLSRLNQKAQESGFNIVFDTQEVARYIPSFDLGFEYLNG 542 Query: 681 --EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 EVS N++A+ GY + G RP+ I + P++ ++ Sbjct: 543 TQEVSSPIANYIADVGYKPSRGVRPIDDTIATYVSDPVSAAII 585 >UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mutans RepID=CLPB_STRMU Length = 860 Score = 264 bits (675), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 165/421 (39%), Positives = 249/421 (59%), Gaps = 31/421 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + Q +E SL A A HR+ + + HL A+L P A + ++ ++ L + + Sbjct: 5 MTQLVEDSLEEAKELAIAHRNYQLDIPHLW-AVLVKPDQFAFQFYQSLEINTNQLIEIIN 63 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE--------VTGANVLVA 111 I++ PVL ++E+ S+ R+ + + ++ E +T ++++A Sbjct: 64 KEIDKI-PVLSSTEKS-------SYARLYSQRLKNLLDDAHQEMIDLKDQVLTVEHLILA 115 Query: 112 IFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN 171 +F++Q + L + +++ + + H RK +P SS Q + +E Sbjct: 116 LFNQQRNPITVFLLEQGLNKEKLYQKM-HRIRKGKPAISSS---------QETIYDALEK 165 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 + NLNQ A ++ +IGR+ E+ I++L R+ KNN +LVG SGVGKTAI EG R+ Sbjct: 166 YAVNLNQRALDEPVNKIIGRQDEMNDIIRILSRKNKNNAVLVGHSGVGKTAIIEGFVQRL 225 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTI 290 V+ VP+ + IYSLDIG+LLAGTKYRG+FE+RFKALL ++ + ILFIDEIH+I Sbjct: 226 VKNQVPKNLQGKVIYSLDIGALLAGTKYRGEFEERFKALLNDIIDSNGQIILFIDEIHSI 285 Query: 291 IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 350 + AG G VDAA+++KPLL+ GKIR+IGSTT+ E+ E DRAL RRFQ+I + EP Sbjct: 286 VSAGRTEGS-VDAASILKPLLARGKIRIIGSTTHAEYRESIEYDRALERRFQRILVHEPD 344 Query: 351 IEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR 410 ++ T++I+ GLKP YE H VR + AA L+ +YI+DR LPDKA+D+IDEA A R Sbjct: 345 LDYTMEILKGLKPIYENFHGVRLEEDGLEAAASLSKRYISDRFLPDKALDLIDEACAAKR 404 Query: 411 L 411 L Sbjct: 405 L 405 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 135/304 (44%), Positives = 204/304 (67%), Gaps = 7/304 (2%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 TV DI +VV R+ I + V +++RD L +L + L + GQD+A++ +++AI +RA Sbjct: 528 TVTREDIAAVVERLTGIKVQGVMENERDRLLHLEELLHQKIVGQDQAVQKVSQAIIRSRA 587 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGA 536 G+ + +P+GSFLF GPTGVGKT + +L++ L +E++R DMSEYME+H VSRL+G Sbjct: 588 GIQNPKRPIGSFLFLGPTGVGKTALAKRLAEVLFGSELEMVRLDMSEYMEKHAVSRLVGP 647 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG+++GG LT+AV + ++++LLDEIEKAHPDVFN LLQV+D G LTD+ GR DF Sbjct: 648 PPGYVGYEEGGQLTEAVRQRLYSIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTIDF 707 Query: 597 RNVVLVMTTNAG---VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHL 653 +N +L+MT+N G + ++ + S G I + ++E+ F PEF NR+D + F+ L Sbjct: 708 KNTILIMTSNIGSTNILQSLQDS-GCITSEVRYKVLDELNHSFRPEFLNRIDETVLFNAL 766 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 S + VV + +LQ +L ++ + L +++ LA++G+D A GARPM R I L+ Sbjct: 767 SEKDMTGVVKVMVSDLQARLLEQDIHLTLTESVYILLAKEGFDAAFGARPMQRTIMQKLE 826 Query: 714 KPLA 717 PLA Sbjct: 827 NPLA 830 >UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SIE3_VERA1 Length = 744 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 141/338 (41%), Positives = 207/338 (61%), Gaps = 18/338 (5%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 +V DI +VV+RI IP ++ L ++ D L+ V GQD+AI+A++ A+++ RA Sbjct: 393 SVTADDIAAVVSRITGIPVSKLTSGHIQKLVHMEDALQASVRGQDEAIKAVSNAVRLQRA 452 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGA 536 GL +++P+ SF F GPTGVGKTE+ +L+ L ++RFDMSE+ E+HT+SRLIGA Sbjct: 453 GLSGDNRPLASFFFLGPTGVGKTELCKKLAGFLFSTESAVVRFDMSEFQEKHTISRLIGA 512 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 P GYVG++ G LT+AV + P+AVLL DE EKAH D+ +LLQV+D G LTD G K DF Sbjct: 513 PSGYVGYEDAGQLTEAVRRKPYAVLLFDEFEKAHRDISALLLQVLDEGYLTDAQGHKVDF 572 Query: 597 RNVVLVMTTNAGV------------RETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRL 644 RN ++V T+N G ETE G + D M+ + + PEF NR+ Sbjct: 573 RNTIIVFTSNLGADILVGANSSHPYTETED---GDVSPDVRKAVMDVVASAYPPEFLNRI 629 Query: 645 DNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 D+ I F L+ + +VD + ELQ +LD + ++L VS + R+WLAE+GYD GARP+ Sbjct: 630 DSFIVFKRLAKMALRDIVDIRLRELQARLDDRRITLNVSSDVRDWLAERGYDPRFGARPL 689 Query: 705 ARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 R+I + + LA+ ++ G L G V + ++ + L Sbjct: 690 NRLITNEIGNGLADRIIRGELKMGETAEVVIKEDGSGL 727 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/293 (35%), Positives = 148/293 (50%), Gaps = 62/293 (21%) Query: 127 HEVSRLDVVNFISHGT-RKDEPTQSSDPGSQPNSEEQAGGEER--MENFTTNLNQLARVG 183 H RL V F ++ + R P PG + G E+ +E F +L Q A+ G Sbjct: 40 HSAQRLPAVAFRAYASGRGPHP-----PGGTHRMDMGGGEPEKPALEQFGIDLTQRAKDG 94 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 +DP+IGR+ E++R IQ+L RR KNNP+L+G +G GKTAI EGLA RIV+GDVPE Sbjct: 95 KLDPVIGRDSEIQRTIQILSRRTKNNPVLIGNAGTGKTAILEGLALRIVRGDVPE----- 149 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 + + + ++R R +A L A +DA Sbjct: 150 -----SVKNKRSSMRFR-----RPRAKSSSSSTSYTRSLV----------SARPKASIDA 189 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP 363 +NL+KP L+ G+++ G+TT E+ I EKD ALARRFQ I + EPS+++T+ I+ G+K Sbjct: 190 SNLLKPALARGELQCCGATTLDEYRQI-EKDVALARRFQPIMVNEPSVQDTISILRGIK- 247 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 D+ LPDKAID++DEA + +L SK Sbjct: 248 ---------------------------DKFLPDKAIDLMDEAASHLKLQHESK 273 >UniRef50_A6NVT1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVT1_9BACE Length = 858 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 135/285 (47%), Positives = 196/285 (68%), Gaps = 2/285 (0%) Query: 146 EPTQSSDPGSQPNS-EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCR 204 +P + S P + N+ +E+A + +EN+ +L Q A G +D ++GR++E+ER IQ+L R Sbjct: 129 QPREESRPREEKNNGKERAPKRKFLENYCISLTQKAAEGKLDNIVGRDQEIERTIQILNR 188 Query: 205 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 R+KNNP L+GE GVGKTAIAEGLA RI +G VP + D +Y LD+ +L+AGT++RG FE Sbjct: 189 RQKNNPCLIGEPGVGKTAIAEGLALRIHEGKVPYKLQDKEVYLLDLTALVAGTQFRGQFE 248 Query: 265 KRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTY 324 R K L+ ++++ N IL IDE+H I+GAG A G ++AAN++KP LS G+I+VIG+TT Sbjct: 249 SRMKGLIDEVKKLGNIILVIDEVHNIVGAGDAEGS-MNAANILKPALSRGEIQVIGATTL 307 Query: 325 QEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVEL 384 E+ EKD AL RRFQ + + EPSIE+ VQII G+K YE +H V + + R AV + Sbjct: 308 TEYRKYIEKDSALERRFQPVIVEEPSIEDAVQIIMGIKSYYEKYHFVSISPEMARLAVTM 367 Query: 385 AVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESV 429 + +YI DR+LPDKAID+IDEA + L + ++ D+E++ Sbjct: 368 SERYITDRYLPDKAIDLIDEACSDVNLHNANLAREAQLKKDLEAI 412 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 121/307 (39%), Positives = 187/307 (60%), Gaps = 7/307 (2%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 + VA + V+ +IP + +++ + L L +RLK + GQD A++A+ A++ R G Sbjct: 529 LTVAHLARVIELWTKIPASQIQEAEYERLAQLENRLKEHIIGQDDAVKAVAAAVRRGRVG 588 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAP 537 + + KPV SF+F G TGVGKTE+ +L+ + L+R DMSE+ME+ VSR+IG+P Sbjct: 589 IASKRKPV-SFIFVGSTGVGKTELVKRLAMDMFHSPESLIRLDMSEFMEKFAVSRIIGSP 647 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+D+ G LT+ V + P+ V+L DEIEKAHPDV NILLQ++D+G +TD GR +F Sbjct: 648 PGYVGYDEAGQLTEKVRRKPYCVILFDEIEKAHPDVLNILLQILDDGHITDAQGRNVNFE 707 Query: 598 NVVLVMTTNAGVRETERKSIGL---IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 N V+VMT+NAG S+G + AM+ ++ PEF NR+D I++F+ LS Sbjct: 708 NTVIVMTSNAGSEAKGSGSVGFGRTAAEQGRERAMKALESFLRPEFINRVDEIVYFNKLS 767 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + + + EL+ L +KG++ ++L +K Y GAR + R IQ +L+ Sbjct: 768 EENFKAIAGIMLGELKGTLAEKGITFTYDDSLLDYLVKKSYSLTYGARNLRRQIQKDLED 827 Query: 715 PLANELL 721 P+A ++ Sbjct: 828 PIATRII 834 >UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=HSP98_NEUCR Length = 927 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 160/413 (38%), Positives = 237/413 (57%), Gaps = 30/413 (7%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLS---NPSAREALEACSVDLVALRQELEAF---- 61 +L A A A ++ H + HL +ALL +PS + RQ +E Sbjct: 14 ALEDAMALAEQYAHSQLLPVHLAVALLDPLPDPSKDQQNAPAGATSSLFRQVIERAHGDP 73 Query: 62 ------IEQTTPVLPASEEERD-TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFS 114 +++ LP+ + D SF VL++A +Q + ++ + L+ + Sbjct: 74 QLFDRALKKALVRLPSQDPPPDHVSMAPSFHTVLRKA-NELQKTQKDTYIAVDHLITALA 132 Query: 115 EQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN--- 171 E+ S L++ + + +V R G++ A EE EN Sbjct: 133 EEPS-IMNALKEANIPKPKLVTDAIQAIR----------GTKRVDSRNADTEEEHENLAK 181 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 FT ++ +AR G IDP+IGRE+E+ R I++L RR KNNP+L+GE GVGKT + EGLA RI Sbjct: 182 FTIDMTAMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTVVEGLAQRI 241 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEIHTI 290 V DVP+ +A+C + SLD+G+L+AG+KYRG+FE+R K +LK++ + I LFIDEIH + Sbjct: 242 VNADVPDNLANCKLLSLDVGALVAGSKYRGEFEERMKGVLKEISESKEMIILFIDEIHLL 301 Query: 291 IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 350 +GAGA+ G +DAANL+KP+L+ G++ IG+TT E+ EKD A RRFQ++ + EPS Sbjct: 302 MGAGASGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVIVKEPS 361 Query: 351 IEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + ET+ I+ GLK KYE HH V + A+ AA LA +Y+ R LPD AID+ID Sbjct: 362 VSETISILRGLKEKYEVHHGVTISDAAIVAAANLAARYLTSRRLPDSAIDLID 414 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 128/310 (41%), Positives = 197/310 (63%), Gaps = 8/310 (2%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I +VAR IP + S+++ L ++ L +V GQ +A+++++ AI++ R+GL + + Sbjct: 567 INEIVARWTGIPVTRLKTSEKEKLLHMEKHLSKIVVGQKEAVQSVSNAIRLQRSGLSNPN 626 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P SFLF GP+G GKT +T L++ L + ++RFDMSEY ERH++SR+IGAPPGYVG Sbjct: 627 QP-PSFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRFDMSEYQERHSLSRMIGAPPGYVG 685 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 D GG LT+A+ + P ++LL DE+EKA +V +LLQ+MD+G +TD GR D RN ++V Sbjct: 686 HDSGGQLTEALRRKPFSILLFDEVEKAAKEVLTVLLQLMDDGRITDGQGRVVDARNCIVV 745 Query: 603 MTTNAGVRETERKSI--GLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 MT+N G R + G I M ++ F PEF NR+ +I+ F+ L+ I + Sbjct: 746 MTSNLGAEYLSRPNAKDGKIDPTTRELVMNALRNYFLPEFLNRISSIVIFNRLTRREIRK 805 Query: 661 VVDKFIVELQVQL--DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 +V+ I E+Q +L + + V +EVS+EA++ L GY A GARP+ RV++ + LA Sbjct: 806 IVELRIAEIQKRLQDNDRNVKIEVSEEAKDKLGALGYSPAYGARPLQRVLEKEVLNRLAV 865 Query: 719 ELLFGSLVDG 728 +L GS+ DG Sbjct: 866 LILRGSIRDG 875 >UniRef50_C6HIF6 Heat shock protein n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HIF6_AJECH Length = 762 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 133/257 (51%), Positives = 182/257 (70%), Gaps = 6/257 (2%) Query: 164 GGEER---MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 GGE +E + +L A+ G +DP+IGR+ E++R IQ+L RR KNNP+L+G +G GK Sbjct: 78 GGEPEKPALEAYGVDLTARAKDGKLDPVIGRDGEIQRTIQILSRRTKNNPVLIGSAGTGK 137 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 280 TAI EGLA RIV+GDVPE + D + +LD+G L+AG K+RGDFE+R K +LK++E Sbjct: 138 TAILEGLAQRIVRGDVPESVKDKRVIALDLGQLIAGAKFRGDFEERLKKVLKEVEDAQGG 197 Query: 281 -ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 ILF+DE+HT++G G A G +DA+NL+KP LS G+++ G+TT E+ I EKD ALAR Sbjct: 198 VILFVDELHTLLGLGKAE-GSIDASNLLKPALSRGELQCCGATTLNEYRQI-EKDVALAR 255 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 399 RFQ I + EPS+ +T+ I+ G+K KYE HH VR T A+ AA + +YI DR+LPDKAI Sbjct: 256 RFQPILVEEPSVPDTISILRGIKEKYEVHHGVRITDGALVAAATYSNRYITDRYLPDKAI 315 Query: 400 DVIDEAGARARLMPVSK 416 D++DEA + RL SK Sbjct: 316 DLVDEAASALRLQQESK 332 Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 122/329 (37%), Positives = 177/329 (53%), Gaps = 39/329 (11%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 +V DI +VV+R IP + + + L N+ D L+ V GQD+A+ A+ A++M RA Sbjct: 459 SVTSDDIAAVVSRTTGIPVNKLMAGEIEKLINMEDTLRQSVRGQDEALSAVANAVRMQRA 518 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGA 536 GL E+KP+ SF+F GPTGVGKTE+ +++ L +LRFDMSE+ E+HTVSRLIG+ Sbjct: 519 GLSGENKPLASFMFLGPTGVGKTELCKKMAGFLFSTETAVLRFDMSEFQEKHTVSRLIGS 578 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 P GYVG G P L LTD G K DF Sbjct: 579 PAGYVGTSPSG---------PRRRL------------------------LTDAQGHKIDF 605 Query: 597 RNVVLVMTTNAGVRE--TERKSIG-LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHL 653 RN ++V+T+N G S+G I D M ++ + PEF NR+D I F L Sbjct: 606 RNTLIVLTSNLGAEMLVAADSSVGEEISSDIKAAVMSIVQSSYPPEFLNRIDEFIIFKRL 665 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 S + +VD + ELQ +LD + ++L V ++WL +KGYD GARP+ R+I + Sbjct: 666 SKPALRDIVDIRLQELQQRLDDRRITLTVEDNVKDWLCDKGYDPRYGARPLNRLISKEIG 725 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNEL 742 LA++++ G +V G V+V + +K+ L Sbjct: 726 NRLADKIIRGEVVTGQGVSVIFNADKSGL 754 >UniRef50_Q46HG6 ATPase n=17 Tax=Cyanobacteria RepID=Q46HG6_PROMT Length = 931 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 150/316 (47%), Positives = 204/316 (64%), Gaps = 12/316 (3%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K VN DI VV+R IP + V +R L L L V GQ A++A++ AI+ A Sbjct: 588 KDKVNPEDIADVVSRWTGIPVRKVVSGERQKLLKLEQDLGKKVIGQLNAVQAVSAAIRRA 647 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 RAG+ +P+GSFLF GPTGVGKTE+ L+ +L E LLR DMSEYMER+ VSRL+ Sbjct: 648 RAGMQDIKRPIGSFLFLGPTGVGKTELAKSLASSLFDEEDALLRLDMSEYMERNAVSRLL 707 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++GG LT+A+ K P+AVLLLDEIEKAH +VFNILLQV+D+G LTD+ GR Sbjct: 708 GAPPGYVGYEEGGQLTEAIRKRPYAVLLLDEIEKAHQEVFNILLQVLDDGRLTDSQGRTV 767 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM---------EEIKKIFTPEFRNRLD 645 DFRN V+VMT+N + S+ L ++++ + + E + K F PEF NR+D Sbjct: 768 DFRNTVIVMTSNLASKAILNNSLQLQSENSNKNILLQELDQKINEALTKHFRPEFLNRID 827 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 +I F+ L D + Q+V + EL+ L +G+ L V + LAE+GY+ GARP+ Sbjct: 828 EVIKFNPLKPDSLEQIVRLQLDELKKLLKHQGLDLYVDENTIKILAEEGYEPEYGARPLR 887 Query: 706 RVIQDNLKKPLANELL 721 RVI+ L+ PLA ++L Sbjct: 888 RVIRRRLENPLATQIL 903 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 176/499 (35%), Positives = 269/499 (53%), Gaps = 66/499 (13%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVL 69 L +A AR RH+ + VEHL+ L N ++ + ++ L + LE FI + L Sbjct: 30 LLIAEQSARRWRHKNLDVEHLIEVLFRNKKYQKYTNSLPINHKELNEILENFIAE----L 85 Query: 70 PASEEERDTQPTL----SFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLR 125 P + QP L + +L+ A G N++ +++L+AI + L + Sbjct: 86 PI-----NNQPDLFIGEDLEILLEVADDFRSRWGSNQIEISHILIAIGRDNRLGEDLLYQ 140 Query: 126 --------KHEVSRLDVVNFISHGTR-KDEP----------------TQSSDPGSQP--- 157 + E+ RL R +D+P T + DP +P Sbjct: 141 AGLPSEILEAELRRLPAPKSFKQSKRNQDKPITNRPQKDSQSFMPTETTAKDPKPEPLPP 200 Query: 158 -NSEEQAGGEE---------RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRK 207 + EE +E ++ + +L A G +DP+IGRE E++ +VL RR K Sbjct: 201 LSKEEITSKQEPLNLNEAPSALDLYCKDLTTEAENGTLDPVIGRESEIKAITKVLSRRGK 260 Query: 208 NNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRF 267 NNP+L+G GVGKTAIAE LA +IV ++PE + + SLDIG+L+AG K+RG FE+RF Sbjct: 261 NNPVLIGAPGVGKTAIAELLAQKIVDNELPESLQGLRLISLDIGALIAGAKFRGQFEERF 320 Query: 268 KALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 ++LL ++ + ILFIDE+HTI+ ++ DA +L+KPLL+SG +R IG+TT Sbjct: 321 RSLLSEINNSEKGVILFIDELHTIVSKDRSN---TDAGSLLKPLLASGDLRCIGATTPDN 377 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + EKD AL RRFQ++ I EPS++ +++I+ GLK YE HH V T +A+ A LA Sbjct: 378 YRRTIEKDLALNRRFQQVSIKEPSLDLSLEILKGLKENYEVHHGVIITDEALITANRLAY 437 Query: 387 KYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDR 446 +YI+DR LPDKAID+IDEA A+ R+ K K + + ES V + E S+ +D+ Sbjct: 438 RYISDRCLPDKAIDLIDEASAQVRIESALKPKI---IEEKESQVNHL----ESSIINADK 490 Query: 447 D----TLKNLGDRLKMLVF 461 D T+ NL ++ ++L+F Sbjct: 491 DTTLETINNLQEKKELLLF 509 >UniRef50_Q9MTD7 Clp n=136 Tax=Apicomplexa RepID=Q9MTD7_TOXGO Length = 765 Score = 262 bits (669), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 169/591 (28%), Positives = 309/591 (52%), Gaps = 38/591 (6%) Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS 247 +I R+ + ++L R+ NP+L+G+ G+GK +I + ++ I + + ++ Sbjct: 169 IINRKSDCVYLYEILNRKIIRNPILLGDFGIGKNSIIKKFSFFIEKFKLKFNNITKNLWI 228 Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG---QVDAA 304 L+I +LL K + K+F K L+++ N IL +I + +++ Sbjct: 229 LNIVTLLKYIKTNNLYIKKF---FKFLQENKNIILICPKIEILFNTYYTDSNIYQNLESY 285 Query: 305 NLIKPLLSS---GKIRVIG-STTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 + + + K+++IG S + F ++ L F+KI + E S +E +I+ Sbjct: 286 SFLFKFFNYIKQNKLQLIGLSNNITDIEKKFNINQELNFLFEKIYVKELSNKEIFKILLK 345 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL---MPVSKR 417 +E +++ + K ++ + + YI K+I ++D ++ + + K Sbjct: 346 KSSLFEKYYNCSISFKIIKHILYYSQTYIKQHKTLLKSIWLLDNTCSKIYVNQKFHLLKN 405 Query: 418 KKTVNVADIESVVARIARIPEKSV----SQSDRDTL---KNLGDRLKMLVFGQDKAIEAL 470 + ++DI+ + ++ + + ++++ D + KNL L FGQ AI + Sbjct: 406 NNKLALSDIQKTLTKLINLSTNLLFNKANKTNFDIIALRKNLQKSL----FGQPTAISKI 461 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMER 527 ++K GL +KP+GS+L GP+G GKTE+ L+K L +L+RFDMSE+ME+ Sbjct: 462 LISLKRVFTGLKQINKPIGSWLLCGPSGTGKTELAKLLAKFLFGSEADLIRFDMSEFMEK 521 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 H++S+LIGAPPGYVG+ + GLLT+A+ K P VLL DEIEKAH D+ N++LQ++D+G LT Sbjct: 522 HSLSKLIGAPPGYVGYGKSGLLTEAIAKKPFTVLLFDEIEKAHKDINNLMLQLLDDGKLT 581 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETER-----KSIGLIHQDN----STDAMEEIKKIFTP 638 D+ G+ DF N ++ T+N G KS + + N S I+ F P Sbjct: 582 DSLGKCVDFSNTLIFFTSNLGFPTNSYELQFLKSGTKLSKKNYKILSNKVESAIQSYFKP 641 Query: 639 EFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL--DQKGVSLEVSQEARNWLAEKGYD 696 EF NRLD+II F L+ + +++KF+ + ++L +Q + L++ + LA+ Y Sbjct: 642 EFLNRLDDIIIFKPLNINFFKYIINKFLKNIYLKLYNNQIPIFLDIDSNIKTLLAKLAYH 701 Query: 697 RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 GARP+ R+++ ++KP+++ L+ S ++ L+K+ + Y F+ Sbjct: 702 PLYGARPLKRLLELIIEKPISDLLINFSFNRIIIFSIFLNKKTFNINYSFK 752 >UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostreococcus RepID=A4RQJ1_OSTLU Length = 807 Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 140/325 (43%), Positives = 204/325 (62%), Gaps = 5/325 (1%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 D+ +VV+R +P + S++ L L L V GQ+ A+ ++ EA++ +RA L Sbjct: 462 DVAAVVSRWTGVPVAKLVSSEKAKLLQLEAELHQRVIGQEAAVTSVAEAVQRSRADLADP 521 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYV 541 + PV SF+F GPTGVGKTE+ L+ L L+R DMSEYME+H+V+RLIGAPPGYV Sbjct: 522 NGPVASFMFLGPTGVGKTELAKALASYLFNSDTALVRLDMSEYMEKHSVARLIGAPPGYV 581 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+D+GG+LTDAV + P++V+L DEIEKAH DVFN+LLQ++D G +TD GR FRN ++ Sbjct: 582 GYDEGGMLTDAVRQKPYSVVLFDEIEKAHVDVFNVLLQLLDEGHVTDTQGRNVSFRNCLI 641 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDA-MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 +MT+N G E + ++ N DA M+ ++ F PEF NRLD I F+ L+ I + Sbjct: 642 IMTSNLGSDEISYAN-KRRNKVNVKDAVMQHVRSHFRPEFVNRLDEFIVFEPLTHAQIEE 700 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +V +L ++D + ++L + + A LA +GYD A GARP+ R IQ L +PLAN + Sbjct: 701 IVQLQTKKLSQRIDTQRMNLSLDRSAIEHLARQGYDPAYGARPVRRAIQRELIQPLANAM 760 Query: 721 LFGSLVDGGQVTVALDKEKNELTYG 745 L G + + V D++ L+ G Sbjct: 761 LRGVFNEDDTILVTADRQGICLSNG 785 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 113/267 (42%), Positives = 176/267 (65%), Gaps = 11/267 (4%) Query: 154 GSQ-PNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLL 212 G+Q P EE + +E F T++ AR G +DPL+GRE+E+ R I +LCRR KNNP+L Sbjct: 47 GAQNPEDEELSA----LERFCTDVTDEARRGLLDPLVGREEEVRRLIHILCRRTKNNPVL 102 Query: 213 VGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLK 272 +G+SGVGKTAI EGLA RIV DVP+ + + +D+G++ AG + G+FE+R +++ Sbjct: 103 LGQSGVGKTAIVEGLAQRIVNDDVPQALRGAKLLEVDLGAVGAGCQMPGEFEERLTIIVQ 162 Query: 273 QLEQDTNS---ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSN 329 ++ T +LFID+IH + A + + A ++KP L G +R +G+T+ +F Sbjct: 163 EVVDATAKGPVVLFIDDIHNLCPAPPMNN---NGAAILKPALGRGLLRCVGATSADKFKK 219 Query: 330 IFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYI 389 E+D AL RRFQ++ + EP++++TV I+ GL+P+YE HH++ + A+ AA +L+ +Y+ Sbjct: 220 TIEQDAALERRFQQVPVEEPNVDDTVSILRGLRPRYEQHHNIAISEGALLAAAQLSARYV 279 Query: 390 NDRHLPDKAIDVIDEAGARARLMPVSK 416 + R LPDKAID++DEA A R+M K Sbjct: 280 SGRQLPDKAIDLLDEAAAAVRMMKTHK 306 >UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteobacteria RepID=A6VUK5_MARMS Length = 873 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 160/417 (38%), Positives = 241/417 (57%), Gaps = 19/417 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSV-DLVAL-RQELE 59 LN + +L+L A A E +H +++EH L LL NP + + C + D V L + +++ Sbjct: 13 LNSQSKLALEQAAALCIERQHHEVSIEHFLSVLLENPMS----DVCVIFDHVKLGKDDIQ 68 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRV-LQRAVFHVQSSGRNEV---TGANVLVAIFSE 115 A I ++ P DT P S V L + + + S+ N+ +GA +L ++ Sbjct: 69 AAISKSYP----RSTTLDTYPPFSPLLVELMQEAWLLSSTELNQTELRSGAILLASLIHP 124 Query: 116 QESQAAYLLRKHEVSRLDVV--NFISHGTRKDEPTQS-SDPGSQPNSEEQAGGEERMENF 172 + ++ E + + NF R E SD + S A G + F Sbjct: 125 DRYYSFEMIGLFEKINKEAIRKNFDLVLERSSESDHVVSDSQDKSTSSSVAAGNSALGKF 184 Query: 173 TTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 TN+ A+ +DP++ RE EL + +LCRRRKNNP++VGE+GVGK+A+ EGLA RIV Sbjct: 185 CTNVTLQAKNDELDPVLCREDELNLMVDILCRRRKNNPIVVGEAGVGKSAVVEGLALRIV 244 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTII 291 G+VP+ +A+ I+SLD+G L AG +G+FEKR K ++ +++ ILFIDE HT+I Sbjct: 245 AGNVPDKLANVEIHSLDLGLLQAGASIKGEFEKRLKGIIDEIKSSPVPIILFIDEAHTLI 304 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 G+G GG DAANL+KP L+ G++ I +TT++E+ FEKD AL RRFQ + + EPS+ Sbjct: 305 GSGNQEGGS-DAANLLKPALARGELSTIAATTWKEYKKYFEKDPALTRRFQLVKVEEPSV 363 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 ++V I+ GL YE H V A++A+ EL+ +Y++ R LPDKAIDV+D A AR Sbjct: 364 SQSVDIMRGLHHVYEKAHGVLIHDDALKASSELSARYLSGRQLPDKAIDVLDTACAR 420 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 111/310 (35%), Positives = 175/310 (56%), Gaps = 17/310 (5%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 VN I V++ +P ++ + + +L + L + GQD AIE + + +RA Sbjct: 546 VNAQQIAEVISDWTGVPIDQMNSDELHKITHLPEILNAKIKGQDVAIECVHRHLLTSRAD 605 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL--GIELLR-FDMSEYMERHTVSRLIGAP 537 L +P G+FL GP+GVGKTE +QL++ L G + L +MSEY E+HTVSRLIG+P Sbjct: 606 LRRPGRPKGAFLLVGPSGVGKTETVIQLAEELYGGKQFLTTINMSEYQEKHTVSRLIGSP 665 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVGF +GG+LT+A+ K P++V+LLDE+EKAHP+V N+ Q D G L D GR D + Sbjct: 666 PGYVGFGEGGVLTEAIRKKPYSVVLLDEVEKAHPEVLNLFYQAFDKGELADGEGRLIDCQ 725 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDA--MEEIKKIFTPEFRNRLDNIIWFDHLST 655 N++ +T+N G + + + +A E+ F P R++ I+ + L+ Sbjct: 726 NILFFLTSNLGYQTI----VDNVETPKEIEAKLYPELVPFFKPALLARME-IVPYLPLNK 780 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAM----GARPMARVIQDN 711 DV+ ++V + L+ +L +K S EV E L ++ +RA GAR + +I+ Sbjct: 781 DVLEKIVLGKLSSLE-KLLRKRYSAEV--EIDPALVQEILNRATRSENGARMLEAIIEGQ 837 Query: 712 LKKPLANELL 721 + P++ LL Sbjct: 838 VLPPISLALL 847 >UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWU6_9BACL Length = 871 Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 192/647 (29%), Positives = 321/647 (49%), Gaps = 96/647 (14%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + + T++ A+ G + +IGR++E+ + VL RR KNN +L+G+ GVGK+AI +G+A Sbjct: 232 LNDIATDITLKAKNGELMDVIGRDEEIRKVEMVLTRRDKNNVILLGDGGVGKSAIVDGIA 291 Query: 229 WRIVQGDVPEVMADCTI-YSL-DIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDE 286 RI + ++ + + +SL D+ + + G G + +++++++ + ILFIDE Sbjct: 292 MRIAKNEIVSLKGKKILQFSLNDLKAKIGGVTSEGIIK-----FIEEMKREKDVILFIDE 346 Query: 287 IHTIIGAGAASGGQVD-AANLIKPLLSSGKIRVIGSTTYQEFS----------------- 328 IH + G+V + KPL++ G R+IG+TT E+ Sbjct: 347 IHML--------GRVKHIMDAFKPLMARGDFRIIGATTPMEWKLYISSDTALVRRFEKVI 398 Query: 329 ----------NIFEKDRALARRFQKIDITEPSIEETVQIIN------------------- 359 NI + ++ F +++ E +IE V++ Sbjct: 399 VDEPSIEETINIVKNVSSVYENFHRVNFEENTIELAVRLAKKYLKGEKLPDSAFTVIDNA 458 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G + EA+ D+ + R V K + + + +D+ R L +K+ Sbjct: 459 GALARIEANQDI-VMIRDYRNEVNKLKKQLKEAESIEYNEAAVDDIRKRLELKVRDFQKE 517 Query: 420 TVNVA-----------DIESVVARIA--RIPEKSVS------QSDRDTLKNLGDRLKMLV 460 N+ DI+ V + A +I EK + + + L NL L V Sbjct: 518 RNNLTFNNYEFKITKEDIKKAVEQKAGVKIREKDLKVGKDADEEELSRLSNLKSILATKV 577 Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELL 517 GQ +A + EA+ ++ G + +P+G FLF G +GVGKTE LS+ L +L+ Sbjct: 578 IGQMEATNTIAEAVIRSKTGFRNPKRPIGVFLFLGTSGVGKTETAKVLSEELTGSVDDLI 637 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 R DMSEY + H V++LIGAPPGYVGF GG+LT AV +P +V+LLDEIEKAHP +++++ Sbjct: 638 RLDMSEYQQEHEVAKLIGAPPGYVGFRSGGILTRAVKNNPKSVVLLDEIEKAHPRIYDLM 697 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAG---VRETERKSIGL----IHQDNSTDAME 630 LQV D+G LTD G + DF N ++++T+N G +R E K +G + Q M Sbjct: 698 LQVFDDGILTDGMGERVDFSNTIIILTSNLGSNLIR--EEKKVGFAKYGMEQIIQEKTMR 755 Query: 631 EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNW 689 I F PE NR+D I+ F + + I ++ ++E +V++ + G L+ ++EA + Sbjct: 756 AINNFFRPELLNRIDEIVTFKSFTEESIFKITS-LLLEKEVEIVKESGYELKFTKEAVRF 814 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 L + YD GAR + R I ++ PL+ ++ + G +V V D Sbjct: 815 LVKTTYDSEKGARAIRRGITKLIETPLSELIINNCINKGDKVVVDSD 861 >UniRef50_B7FUC8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FUC8_PHATR Length = 768 Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 131/249 (52%), Positives = 177/249 (71%), Gaps = 3/249 (1%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +E FT +L A +DP+IGR +E+ R +Q+L RR KNNP+L+GE+GVGKTAIAEGLA Sbjct: 13 LEQFTVDLTNQAADNKLDPIIGRHEEIRRCLQILARRTKNNPVLIGEAGVGKTAIAEGLA 72 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEI 287 RI G+VPE M D + SLDI +L AG RG FE+R K ++K +EQ + ILFIDEI Sbjct: 73 QRIHSGEVPESMKDKRVLSLDIAALTAGAMMRGQFEERLKGVVKDVEQAEGKVILFIDEI 132 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HTI+GAG A GG +D +N++KP L+ G ++++G+TT EF I EKD ALARRFQ + + Sbjct: 133 HTIVGAGKAEGG-MDMSNMLKPALARGDLQLVGATTLNEF-RILEKDAALARRFQSVYVA 190 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS+E+++ I+ GLK YE HH +R +A+ AA L+ +YI DR PDK+ID++DEA + Sbjct: 191 EPSVEDSLSILRGLKTAYELHHGIRIKDEALVAAATLSDRYIADRKQPDKSIDLVDEACS 250 Query: 408 RARLMPVSK 416 R RL SK Sbjct: 251 RLRLEQESK 259 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 142/349 (40%), Positives = 217/349 (62%), Gaps = 14/349 (4%) Query: 414 VSKRKKTVNVAD------IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 V + KKT +AD I +++AR IP ++ ++ L ++ D+L+ V GQD A+ Sbjct: 373 VDEHKKTKMLADSVTAEAIATIIARHTGIPVSRIAGNESQKLLHIEDKLRERVVGQDHAL 432 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEY 524 EA+ + +++AR L + + +G+FLF GPTGVGKTE L+ L + + R DMSEY Sbjct: 433 EAVGDCVRLARTRLQAQDRTLGNFLFLGPTGVGKTETAKALAHFLFDDQDAMTRIDMSEY 492 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 E+HTVSRLIGAPPGYVG+++GG+LT++V + P+ VLLLDE EK H +V+N+LLQ+ D G Sbjct: 493 GEKHTVSRLIGAPPGYVGYEEGGVLTESVRRRPYQVLLLDEFEKGHREVWNLLLQLFDEG 552 Query: 585 TLTDNNGRKADFRNVVLVMTTNAG---VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFR 641 LTD++GRK DFRNV+++MT+N G + E + G + T ME +++ +PE Sbjct: 553 HLTDSHGRKVDFRNVIVIMTSNLGAQIIAELPAQLKGSEPHVHDT-IMEVVRQSLSPELL 611 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMG 700 NR+D+ I F+ L + + + + I E++ +L D + +SL+VS A +AE GYD G Sbjct: 612 NRIDDTIVFNRLQRENMDTIAEMGIKEIEKRLEDGQNMSLDVSSTATAVIAEMGYDVRYG 671 Query: 701 ARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 ARP+ R + L PL+ +L G++++G V V E +L G A Sbjct: 672 ARPLKRTLAKTLLNPLSRLVLEGAVMEGDTVKVRTRGEAEKLQNGTGDA 720 >UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1U8_9BACT Length = 829 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 156/395 (39%), Positives = 235/395 (59%), Gaps = 23/395 (5%) Query: 22 HEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELEAFIE--QTTPVLPASEEERD 77 H +T HL LA+L + + L VDL++ ++L ++ + TP + R Sbjct: 26 HAEITDLHLSLAILRQKESEIKYRLLEAGVDLLSYERKLTEALQDRRATPGVSKLYYSRQ 85 Query: 78 TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNF 137 + + RA F V ++ +AI ++ES +A + + V+ V + Sbjct: 86 YHRIVLVSGEISRASFDAY------VRTPHLYLAILRDRESPSAAIAAEFGVTVESVQSM 139 Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 ++ T S + G P EQ + F N + AR G +DP++GR++E+ Sbjct: 140 LAARL-----TASDELGISPEQMEQ------LNRFGRNFLKEAREGLMDPVLGRDEEINE 188 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 +VL RR KNNP+L+GE+GVGKTA+AEG+A RI + D P ++ ++SLD+ +L+AGT Sbjct: 189 CFRVLSRRLKNNPVLIGEAGVGKTAVAEGIAQRIAKQDAPALLRGRMVFSLDMAALVAGT 248 Query: 258 KYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 KYRGDFE+R K +L+ ++ ILF+DE+HTIIGAG+ S G +D +N++KP L+ G+I Sbjct: 249 KYRGDFEERLKEILEIIKASKGRIILFVDELHTIIGAGSGS-GSMDTSNILKPFLARGEI 307 Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAK 376 +IG+TT +E+ E DRAL RRFQKI I EPS E + ++ G+ KYE HH VR Sbjct: 308 LMIGATTVEEYRRYIEPDRALERRFQKILIEEPSEEAALSMLRGVVSKYETHHRVRIADG 367 Query: 377 AVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 A+ AA++L+ +YI DR+LPDKAID+IDEAGA R+ Sbjct: 368 ALIAAIQLSKRYITDRYLPDKAIDLIDEAGAMVRM 402 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 105/351 (29%), Positives = 181/351 (51%), Gaps = 33/351 (9%) Query: 387 KYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDR 446 +++ +R D I I+ G PVS+ V +I+ +VA A IP S+ +S+ Sbjct: 499 RFVAERQAFDAKIAEIERIGPH---YPVSR---EVTEEEIKRIVAVRAGIPLSSIGRSES 552 Query: 447 DTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTV 506 + L+ G L G A+ A+ ++I AR+GL +PVGSFL GP+G GK+ + Sbjct: 553 EKLEQAGKSLLAEFVGHRDAVSAVRQSILRARSGLMKRRRPVGSFLLVGPSGTGKSYLAE 612 Query: 507 QLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLL 563 +K + L F+M E+ ++ +V++LIGAPPGYVG D G LT+AV PH+V++ Sbjct: 613 LFAKHYYEDERSPLSFNMREFTDKASVNKLIGAPPGYVGHDAAGALTEAVRLRPHSVIVF 672 Query: 564 DEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQD 623 + ++ A +V +++ ++ +G + DN GR DFRN +L T Sbjct: 673 ESVDHAGAEVLSLIARLAADGEIADNRGRTVDFRNALLFFTV------------------ 714 Query: 624 NSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS 683 STD ++++ R+ LD + +F+ S +++ + ELQ +L+++ + L Sbjct: 715 TSTDRDPPVREL----LRDGLDGVYYFEDFSLRERRELLTLRLRELQRELEEEQIELSWD 770 Query: 684 QEARNWLAEKGYDRA-MGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 + + + G+DRA GA P+A ++ + LA + L G L G +V + Sbjct: 771 EATLDAVT-AGFDRAESGAHPVAGYMERTVLADLAAKKLLGRLRPGARVVI 820 >UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MLM7_9CHLO Length = 886 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 176/515 (34%), Positives = 276/515 (53%), Gaps = 46/515 (8%) Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTT 323 +++ L K E+D I+++H SGG++ A+ L + L+ +R T Sbjct: 369 DRKMSQLCK--ERDQIKARLIEDMHK-----HGSGGKMAASCLHE--LNEELVR--ERTK 417 Query: 324 YQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVE 383 Q+ EK++ +R +++ E S E +++N + + +A +V+ A++ A + Sbjct: 418 QQKLLRDLEKEKKASREYKRA-TAELSFSER-RLVNAHEKQRQAADNVKKVTVALQRAQD 475 Query: 384 L------------AVKYINDRHLPDKAIDVIDEAGARAR---------LMPVSK-----R 417 A + D L DK + E ARA+ +M +S+ Sbjct: 476 TDNQAEVLEAKAAATRAEQDAKLADKETLHLSEIIARAKVECTKAEEEIMSISEGNGLMT 535 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K V DI +VV+R +P + S++ L L L V GQD A+ ++ EA++ + Sbjct: 536 KDEVTDVDIATVVSRWTGVPVAKLVASEKAKLLQLDAELHQRVIGQDHAVTSVAEAVQRS 595 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLI 534 RA L + PV SF+F GPTGVGKTE+ L+ L L+R DMSEYME+H+V+RLI Sbjct: 596 RADLSDPNGPVASFMFLGPTGVGKTELAKALANYLFNSDNALIRLDMSEYMEKHSVARLI 655 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGY+G+D+GG+LTDAV + P++++L DEIEKAH DVFN+LLQ++D G +TD GR Sbjct: 656 GAPPGYIGYDEGGMLTDAVRQKPYSIVLFDEIEKAHVDVFNVLLQLLDEGHVTDTQGRTV 715 Query: 595 DFRNVVLVMTTNAGVRE----TERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 FRN +++MT+N G E + + M ++ F PEF NRLD I F Sbjct: 716 SFRNCLIIMTSNLGSDEIAFGDRGRRGRRGPGEMKDKVMAHVRAHFRPEFINRLDEFIVF 775 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 + LS I ++V +L +++ + + L++ A ++LA KG+D GARP+ R IQ Sbjct: 776 EPLSHSQIMEIVQLQCNKLVERVEGQRMKLDLQPSAIDYLARKGFDPTYGARPVKRAIQS 835 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 L + +AN+LL G + + V+ DK+ LT G Sbjct: 836 ELIQNMANKLLRGIFQEDDTIVVSADKDGLALTTG 870 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 115/275 (41%), Positives = 173/275 (62%), Gaps = 12/275 (4%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 G P+ E A +E F T++ + A+ G +DPL+GR+ E+ R + +LCRR KNNP+L+ Sbjct: 104 GDDPDEELSA-----LERFCTDVTEEAKQGVLDPLVGRDDEVRRLVHILCRRTKNNPILL 158 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 G GVGKTAI EGLA RIV GDVP + + LD+G++ AG + G+FE+R ++ + Sbjct: 159 GRPGVGKTAIVEGLAQRIVAGDVPTSLLGARLLELDLGAVGAGCQMPGEFEERLSIVVSE 218 Query: 274 L---EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNI 330 + Q I+FID+IH + GG + A ++KP L G ++ IG++T ++F Sbjct: 219 VVEASQKGGIIMFIDDIHNL--CPPPPGGN-NGAAILKPALGRGLLKCIGASTVEKFKKS 275 Query: 331 FEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYIN 390 E+D AL RRFQ++ + EP I +TV ++ GL+P+YE HH ++ AV AA +LA +Y+ Sbjct: 276 IEQDAALERRFQQVPVAEPDIAQTVSVLRGLRPRYETHHSIKIHESAVVAAAKLASRYVQ 335 Query: 391 DRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVAD 425 R LPDKAID++DEA A R M S + + ++V D Sbjct: 336 GRCLPDKAIDLLDEAAAAVR-MQKSLKPEDLDVVD 369 >UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GY73_PARBA Length = 732 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 140/337 (41%), Positives = 208/337 (61%), Gaps = 8/337 (2%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 +V DI VV+R IP + + + L ++ D L+ V GQD+A+ A+ A++M RA Sbjct: 396 SVTSDDIAGVVSRTTGIPVNKLMAGEVEKLIHMEDTLRQSVRGQDEALCAVANAVRMQRA 455 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGA 536 GL E++P+ SF+F GPTGVGKTE+ +++ L +LRFDMSE+ E+HTVSRLIG+ Sbjct: 456 GLSGENRPLASFMFLGPTGVGKTELCKKMAGFLFSTESAVLRFDMSEFQEKHTVSRLIGS 515 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 P GYVG++ G LT+AV + P+AVLL DE EKAH D+ +LLQV+D G LTD G K DF Sbjct: 516 PAGYVGYEDAGQLTEAVRRKPYAVLLFDEFEKAHRDISALLLQVLDEGFLTDAQGHKIDF 575 Query: 597 RNVVLVMTTNAGVRETERKSIGLIHQDNSTD----AMEEIKKIFTPEFRNRLDNIIWFDH 652 RN ++V+T+N G E S + ++ ST+ M ++ + PEF NR+D I F Sbjct: 576 RNTLIVLTSNLGA-EILVGSDPTLGEEVSTEIKSAVMATVQTSYPPEFLNRIDEFIIFKR 634 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 LS + +VD + ELQ++LD + ++L+V + WL +KGYD GARP+ R+I + Sbjct: 635 LSRKALRDIVDIRLRELQLRLDDRRITLKVDDGVKGWLCDKGYDPRYGARPLNRLIAKEI 694 Query: 713 KKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 LA++++ G + G V L+ +K+ L + A Sbjct: 695 GNRLADKIIRGQVTTGQVAHVTLNADKSGLNVATEEA 731 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 100/191 (52%), Positives = 138/191 (72%), Gaps = 6/191 (3%) Query: 164 GGEER---MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 GGE +E + +L A+ G +DP+IGR+ E++R IQ+L RR KNNP+L+G +G GK Sbjct: 78 GGEPEKSALEEYGVDLTARAKDGKLDPVIGRDGEIQRTIQILSRRTKNNPVLIGSAGTGK 137 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 280 TAI EGLA RIV+GDVPE + + + SLD+G L+AG K+RGDFE+R K +LK++E+ Sbjct: 138 TAILEGLAQRIVRGDVPESVKNKRVISLDLGQLIAGAKFRGDFEERLKKVLKEVEEAQGG 197 Query: 281 -ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 ILF+DE+HT++G G A G +DA+NL+KP LS G+++ G+TT E+ I EKD ALAR Sbjct: 198 VILFVDELHTLLGLGKAE-GSIDASNLLKPALSRGELQCCGATTLNEYRQI-EKDVALAR 255 Query: 340 RFQKIDITEPS 350 RFQ I + EPS Sbjct: 256 RFQPIVVEEPS 266 >UniRef50_Q8EW28 Chaperone protein clpB n=2 Tax=Bacteria RepID=CLPB_MYCPE Length = 705 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 122/313 (38%), Positives = 198/313 (63%), Gaps = 13/313 (4%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K ++ D+ +++RI +IP + + ++D L NL + LK V GQD+A++ +++ + Sbjct: 382 KDYISEIDVAEIISRITKIPLNKIFEKEQDKLLNLFNNLKKRVKGQDEALKLVSDTVLKN 441 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLI 534 R G+ + ++P+GSFLF GPTGVGKTEV L++ L ++R +MSEYME+H++SRLI Sbjct: 442 RVGINNPNRPIGSFLFVGPTGVGKTEVAKSLAENLFNTEKAIVRINMSEYMEKHSISRLI 501 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGY+G++Q G L++ + + P++V+LLDEIEKAHPD+ N+LLQV+D GTL DN GR Sbjct: 502 GAPPGYIGYEQAGELSEQIRRKPYSVVLLDEIEKAHPDILNVLLQVLDEGTLKDNQGRNI 561 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAME-EIKKIFTPEFRNRLDNIIWFDHL 653 +F+N +++MT+N G L +N D E E+K F PEF NR+D II F+ + Sbjct: 562 NFKNTIIIMTSNVG---------ALYLMENKEDMFERELKTSFKPEFLNRIDEIIKFNSI 612 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + ++ K + +L+ +L + + ++A+ GY + GARP+ R IQ ++ Sbjct: 613 TMEFAKEIAQKMLDDLEKRLKDNNYQITFDKSVVEYVAKNGYSKEYGARPINRFIQKTIE 672 Query: 714 KPLANELLFGSLV 726 + +L L+ Sbjct: 673 NFITESILKNELI 685 Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 121/280 (43%), Positives = 190/280 (67%), Gaps = 2/280 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ ++ NLN+ ++ +IGRE+E+ R I++L R+ KNNP+L+GE GVGKTAI EG Sbjct: 14 LKKYSRNLNEEVSANKLNKIIGREQEIRRVIEILSRKEKNNPVLIGEPGVGKTAIVEGFV 73 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEI 287 +I+ +VPE + C +Y +++ SL+AGT +G+FEKR AL+K+ +Q+ + ILFIDEI Sbjct: 74 QKIISKEVPENLVHCVVYEVNLSSLIAGTFLQGEFEKRLNALIKEAKQNNGAVILFIDEI 133 Query: 288 HTIIGAG-AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 H ++G G A + +DAAN++KP+++ G+I++IG+TT E+ EKD AL RRFQKI + Sbjct: 134 HQLMGMGKAGNNSGMDAANILKPIMARGEIKIIGATTSNEYRQYIEKDGALERRFQKILV 193 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EP+ EE + I+ GLK K+E +H VR A+ A+V+L+ +YI+D++LPDKAID+IDEA Sbjct: 194 EEPTPEEALTIMRGLKEKWEIYHKVRIQDNALVASVKLSERYISDKYLPDKAIDLIDEAA 253 Query: 407 ARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDR 446 A+ + + + +N +IA E+ +Q +R Sbjct: 254 AKIKTEAHTSPSEPINKKIFYLETEKIALSKEEGTNQKER 293 >UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0EI70_ENTDI Length = 840 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 138/333 (41%), Positives = 210/333 (63%), Gaps = 21/333 (6%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V IE VV+R IP ++Q+++ L L + L V GQ++A+ A+++AI +R G Sbjct: 507 VTPTQIEEVVSRWTGIPVTKMNQTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRGG 566 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL-------LRFDMSEYMERHTVSRL 533 LG+E +P GSF+F GP+GVGKTE L+KAL +EL +R DMSEYME H+VSRL Sbjct: 567 LGNEKRPTGSFMFLGPSGVGKTE----LAKALAVELFDDEQNIVRIDMSEYMESHSVSRL 622 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 IGAPPGYVG+++GG LT+A+ + P++V+L DEIEKAHP VFN+LLQ++D G LTD GR Sbjct: 623 IGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRT 682 Query: 594 ADFRNVVLVMTTNAG----VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIW 649 DF+N +++MT+N G ++ ER+ G + + ME +KK F PEF NRLD+I Sbjct: 683 VDFKNTIVIMTSNLGSEIIMKGVERE--GQVSRKVKETVMEIVKKTFKPEFLNRLDDITV 740 Query: 650 FDHLSTDVIHQVVDKFIVELQVQLDQKGVSL---EVSQEARNWLAEKGYDRAMGARPMAR 706 F LS + ++V + E+ +++ +K L E+++ A + + GY A GARPM R Sbjct: 741 FSPLSEKELKEIVKLQMGEV-IKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRR 799 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 I+ + + ++ G + + ++ + + +K Sbjct: 800 YIEKTVVTSITKSIISGMMKEKNKIQIDYENDK 832 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 150/391 (38%), Positives = 238/391 (60%), Gaps = 25/391 (6%) Query: 17 AREHRHEFMTVEHLLLALL---SNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASE 73 A E ++ ++ H++ A++ SN R +E D+ L++E++ + + PV Sbjct: 21 AFERKNAYIMPIHMMEAIVEEESNIVIR-IVEMMGGDVNKLKKEIKETMNKV-PVQNPPP 78 Query: 74 EERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLD 133 + PT Q+VL+RA+ + G + + +++++ E+E S ++ Sbjct: 79 VDIGLHPTT--QQVLRRAIEKQKIMGDSYLAIDVIVMSLMEEKEISTIV-----GNSGIN 131 Query: 134 VVNFISHGT--RKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGR 191 V F T RK + ++ + SQ E ++ + +L A G +DP+IGR Sbjct: 132 VKEFNKKITEMRKGQSVETKEAESQ---------YEALKKYGNDLTAQAESGKMDPIIGR 182 Query: 192 EKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 251 ++E++R I++L RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVP + C + LD+G Sbjct: 183 DEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL-QCRVIGLDMG 241 Query: 252 SLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPL 310 +L+AG +YRG FE+R KA++K++ E ILFIDEIHT++GAGA G +DAAN++KP+ Sbjct: 242 ALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANILKPM 301 Query: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD 370 LS G++R IG+TT +E+ EKD A RRFQ++ + EPS E+T+ I+ G++ KYE H+ Sbjct: 302 LSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEEDTLYILRGIREKYENHYG 361 Query: 371 VRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 + T A+ +A L+ +YIN R LPDKAID+ Sbjct: 362 LTITDSALVSAATLSKRYINGRFLPDKAIDL 392 >UniRef50_B0SCX5 Endopeptidase Clp, ATP-dependent proteolytic subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCX5_LEPBA Length = 795 Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 125/247 (50%), Positives = 181/247 (73%), Gaps = 2/247 (0%) Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 +E + NF NLN LAR G +DP+IGR KE+ +++L RR KNNP+LVG +GVGKTAI E Sbjct: 128 DEEVPNFLVNLNDLAREGKLDPVIGRSKEIRSVMEILGRRSKNNPVLVGSAGVGKTAIVE 187 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFI 284 GLA +IV+G VP+V+ TI+SLD+G L+AGTKYRG+FE++ ALL+ ++ Q +ILFI Sbjct: 188 GLAEQIVKGRVPDVLKGKTIFSLDMGQLMAGTKYRGEFEEKLTALLRYIKGQAGEAILFI 247 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DEIH ++GAG G +DAANL+KP L+ G++ IG+TT EF D+AL RRF+ + Sbjct: 248 DEIHQLVGAGKTDGA-MDAANLLKPALARGELHCIGATTGDEFQKYILGDQALERRFRAV 306 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EPS E+ ++I+ G++ K+E HH ++ + +A+ A+V L+ +YI D+ LPDKAID++DE Sbjct: 307 PVNEPSKEDAIEILMGIRDKHEIHHGIKISDEAIYASVLLSDQYITDKFLPDKAIDLVDE 366 Query: 405 AGARARL 411 A + +L Sbjct: 367 AASALKL 373 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 117/306 (38%), Positives = 194/306 (63%), Gaps = 25/306 (8%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I +V+AR IP + + ++ ++ L +L D L +V+GQ ++I + + + + AG+ E Sbjct: 488 IAAVIARQTGIPVEKILKTKQENLLHLEDDLNSVVYGQKESIREIADTLLTSYAGISSET 547 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+GSFL GPTGVGKTE ++K L + L+R D+SEY E+H+V++LIGAP GY+G Sbjct: 548 RPLGSFLLKGPTGVGKTETAKAIAKFLFDQESNLVRLDLSEYSEKHSVAKLIGAPAGYIG 607 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 +D+GG+LT+A+ + P++V+L DE+EKAHPD +ILLQ++D+G LTDN GR +F+N +++ Sbjct: 608 YDEGGILTEAIRRKPYSVVLFDEVEKAHPDFSDILLQILDDGRLTDNKGRTINFKNTIVI 667 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 662 +TTN+ + I+ F PE RLD I+ + L + ++ +++ Sbjct: 668 LTTNS----------------------KNIEVDFKPEVLGRLDAILTYHSLDSSIMEKLI 705 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 +K + L +L KGV +E+S+ + L E+G+D GARP+ V + +PLA +L Sbjct: 706 EKQLRSLNDRLKVKGVVIELSESTEHILREQGFDPKFGARPLGSVFNRIVNRPLAKAILS 765 Query: 723 GSLVDG 728 G++V+G Sbjct: 766 GTMVEG 771 >UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BFB3_9FIRM Length = 843 Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 129/244 (52%), Positives = 178/244 (72%), Gaps = 2/244 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +E + T L + A G +DP+IGRE+E AI++L RR KNNP+L+G++GVGKTAI EG+ Sbjct: 160 LEKYGTVLTKEAIEGRLDPVIGREEETRTAIRILSRRIKNNPVLIGDAGVGKTAIVEGIV 219 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEI 287 RIV GDVP+ + D I+SLD+ SL+AG KYRGDFE+R K +L+ ++ ILFIDEI Sbjct: 220 QRIVAGDVPDDLKDKIIFSLDMTSLVAGAKYRGDFEERLKKILEIIKDSKGRIILFIDEI 279 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 H IIG+G+AS G +D AN++KP+L+ G I IG+TT +E+ E D+AL RRFQKI I Sbjct: 280 HNIIGSGSAS-GTMDTANMLKPMLARGDILTIGATTIEEYRKYIEVDKALDRRFQKILIE 338 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPSIE T+ I+ G+K KYE HH ++ T A+ AV+L+ +++ +R LPD AIDVIDEA A Sbjct: 339 EPSIETTIAIMRGIKSKYENHHMIKITDPALTEAVKLSKRFLTERKLPDVAIDVIDEACA 398 Query: 408 RARL 411 + ++ Sbjct: 399 QVKM 402 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 174/333 (52%), Gaps = 32/333 (9%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V V++++ ++++++ +P+ + D++ + ++LK G D I+ + +A G Sbjct: 527 VGVSEVKDIISKMSGMPKSKLQYDKLDSINIVREKLKEEFVGGDDMIDKIINTYIIAEGG 586 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAP 537 L KPV SF+ GP+ GK+ + L+ L LL FDMSE+ ++ ++++LIGAP Sbjct: 587 LFERSKPVLSFIVTGPSSSGKSYIAKLLADYLYEGDKSLLSFDMSEFTDKSSITKLIGAP 646 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG++ GG+LT A+ P++VL+ + IE AH +V N++LQ++ +GT+ DN GR + + Sbjct: 647 PGYVGYEFGGVLTQALRTKPYSVLVFENIENAHFEVQNLVLQIVQDGTIKDNKGRDINLK 706 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDV 657 N ++V+T D E K+ +F +D + L D Sbjct: 707 NSIVVLTMTV------------------EDGDESAKEKLDVDFGKYVDYVFKLKRLDDDK 748 Query: 658 IHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL----- 712 + +++ EL+ L ++ ++L + + + D AR + ++I+ ++ Sbjct: 749 LDKLISLNFKELEKALAERQINLSYAGGFFDKFGKYAKDEGFDARSLKKLIEQDVYFLIC 808 Query: 713 KKPLANEL-LFGSLV---DG-GQVTVALDKEKN 740 +K L +E+ F L+ DG + TV L KEKN Sbjct: 809 EKNLTSEIKAFSELILDFDGENKFTVKL-KEKN 840 >UniRef50_Q7NHQ2 ATP-dependent protease ATP-binding subunit n=1 Tax=Gloeobacter violaceus RepID=Q7NHQ2_GLOVI Length = 727 Score = 258 bits (658), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 178/592 (30%), Positives = 304/592 (51%), Gaps = 34/592 (5%) Query: 148 TQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRK 207 T ++ PG +P + + +E F +L + A+ G + +GRE+E++ I+ LCRR K Sbjct: 129 TTAAPPGYRPRARKPT---PMLERFGRDLTREAQQGQLSAFVGREEEVQLVIETLCRRTK 185 Query: 208 NNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRF 267 NPLLVG +GVGKTAI EGLA R+V VP V+A ++++ +L+AGT G+ E RF Sbjct: 186 RNPLLVGPAGVGKTAIVEGLAQRLVASQVPAVLAGARLFAVQPSTLVAGTSVVGELENRF 245 Query: 268 KALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEF 327 KALLK+ QD +LFIDE+H+++GAG +G D A+L+KP L+ G+I I +TT EF Sbjct: 246 KALLKEASQD-GVLLFIDEVHSVVGAGGRAGTD-DVASLLKPALARGEIACIAATTDDEF 303 Query: 328 SNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK 387 E D AL RRFQ I I E + E+T+ ++ L + V+ A+ V+ A + Sbjct: 304 RRYIEPDAALERRFQPIRIQELNAEQTLAVLRALAHELGQLRGVQVGEAALSWLVDFAAQ 363 Query: 388 YINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRD 447 ++ +R PDKAID++++ A A V++ K V+++D +V R+ +P V+ ++R Sbjct: 364 FLPNRRFPDKAIDLLEQCVAFA----VARDKGAVDLSDATAVARRMVGMP---VAVAERL 416 Query: 448 TL--KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG-HEHKPVGSFLF---AGPTGVGK 501 T + L R+ ++ ++ I+AL + + L +P + L A G Sbjct: 417 TALRRELPGRVALV----EEDIQALVGRLNVTLRSLDLRPARPNAALLLVDRAAALGEAL 472 Query: 502 TEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVL 561 +L ++ D + +S L+GAPPGYVG+ L + + P VL Sbjct: 473 GGALAELLFGSAERVIAIDFGSFTSPADLSMLLGAPPGYVGYAD-TLPIHRLAQMPWCVL 531 Query: 562 LLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH 621 D + HP + +L Q +++G TD +G++A + V+++T + ++S+G Sbjct: 532 RCDNVHACHPQIREVLAQALESGFFTDAHGKRAYLSDAVVLITAEVAL--ASQRSLGFAG 589 Query: 622 QDNSTDA-----MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ--VVDKFIVELQVQLD 674 + + D+ ++ + F R D +++ D Q + ++ + +L + Sbjct: 590 ERPAADSESPGVIQSASAVLGAGFVGRCD-LVFAAAAGVDAAQQRWLRERLLADLSARYR 648 Query: 675 QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLV 726 ++G+ L WLA++ R+ G R R++ + L L L G V Sbjct: 649 RQGLELHWDDSLVQWLADQHTSRS-GPRDWERLVDERLSPALIEYLPPGEQV 699 >UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI Length = 905 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 128/251 (50%), Positives = 186/251 (74%), Gaps = 3/251 (1%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + + +L +LA+VG +DP+IGR++E+ R + L RR KNNP+L+GE GVGKTAIAEGLA Sbjct: 179 LAKYGRDLTELAKVGKLDPVIGRDEEVRRVVSCLSRRTKNNPVLIGEPGVGKTAIAEGLA 238 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEI 287 RIV GDVPE + + + SLD+GSL+AG K+RG+FE+R +++L+++ D +LFIDE+ Sbjct: 239 QRIVNGDVPESLKERQLISLDMGSLIAGAKFRGEFEERLRSVLREVTHSDGQIVLFIDEL 298 Query: 288 HTIIGAGAASGGQV--DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 HT++GAG+ G DA NL+KP+L+ G++R IG+TT E+ EKD AL RRFQK++ Sbjct: 299 HTVVGAGSGGGNSSGVDAGNLLKPMLARGELRCIGATTIDEYRKHIEKDAALERRFQKVE 358 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 + +PS+E+T+ I+ GLK +YE HH V+ T A+ AA L+ +YI+DR LPDKAID++DEA Sbjct: 359 VGQPSVEDTISILRGLKDRYETHHGVKITDAALVAAATLSNRYISDRFLPDKAIDLVDEA 418 Query: 406 GARARLMPVSK 416 A+ ++ SK Sbjct: 419 AAQLKMEITSK 429 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 142/325 (43%), Positives = 204/325 (62%), Gaps = 14/325 (4%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 ++ V DI ++VA+ IP + +S+R L L L V GQ +A+ A+ AI+ A Sbjct: 566 REQVTDGDIATIVAKWTGIPVNRLLESERQKLLQLEKHLHQRVIGQSEAVAAVAAAIRRA 625 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLI 534 RAG+ +P+GSF+F GPTGVGKTE+ L+ L L+R DMSEYME+H V+RL+ Sbjct: 626 RAGMKDPGRPIGSFMFLGPTGVGKTELARALAGFLFDRDDALVRVDMSEYMEKHAVARLV 685 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+DQGG L++AV +HP++++L DE+EKAHPDVFNILLQV+D+G +TD+ GR Sbjct: 686 GAPPGYVGYDQGGQLSEAVRRHPYSLVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRVI 745 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNS------TDAMEEIKKIFTPEFRNRLDNII 648 DF N V+VMT+N G + I + D+S M ++K F PEF NR+D II Sbjct: 746 DFSNTVIVMTSNIG-----SEYILDVAGDDSKYEEMYKRVMGALRKHFRPEFLNRVDEII 800 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F L + Q+V+ + ++ L ++ +SL+++ + + E GYD GARP+ R I Sbjct: 801 LFHTLRKSELRQIVEIQVKRIERLLGEQKISLQLTDATLDHITEVGYDPVYGARPLKRAI 860 Query: 709 QDNLKKPLANELLFGSLVDGGQVTV 733 Q L+ PLAN++L V G V + Sbjct: 861 QRELENPLANQILENRFVCGDVVII 885 >UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KUA3_TOXGO Length = 970 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 159/427 (37%), Positives = 252/427 (59%), Gaps = 41/427 (9%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALL---SNPSAREALEACSVDLVALRQELEAFIEQTT 66 L+ A A RH +T H L LL S +LE C ++ L++ + + + Sbjct: 68 LDQAEVLAMYMRHRQITPVHFLTVLLEVQGEFSIVRSLEQCGANVYELKKAMSNVLIK-- 125 Query: 67 PVLPASEE-----ERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 LP S + E ++ P L +RV RA+ Q + + +++ ++F E Sbjct: 126 --LPTSADVEIVDELESTPQL--KRVALRALEIAQKDKKQTIGMEHLITSLFEENN---- 177 Query: 122 YLLRKH-EVSRLDVVNFISHGTR---------------KDEPTQSSDPGSQPNSEEQAGG 165 LRK E + +V F+ H T K +PT+ S S+ ++ A Sbjct: 178 --LRKSLEQAGCNVKVFLEHSTTMYENKFKQDVASRSMKKQPTEGSPATSR--AKPDASD 233 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 EE +++F ++ +LA G ++P++GR KE++ + VL R+ K NP LVGE GVGKTA+ E Sbjct: 234 EEFVQSFGVDMTKLAAEGKLEPVVGRNKEIKEVLTVLSRKGKGNPCLVGEPGVGKTAVVE 293 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLK-QLEQDTNSILFI 284 GLA R+V+G VP+ + + ++++D+G+L+AG YRG+FEKR KAL++ + Q+ ILFI Sbjct: 294 GLAQRLVEGMVPKSLENKILFAVDLGALIAGATYRGEFEKRMKALIRYAVNQEGRVILFI 353 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DE+H ++GAG S G +DAANL+KP ++ G+IR++G+TT +E+ I EKD A+ RR + I Sbjct: 354 DELHMLMGAG-KSDGTMDAANLLKPPMARGEIRLVGATTQEEY-KIIEKDAAMERRLKPI 411 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 I EPS + + I+ L K+E+HH+++ + +A+ AAV L+ KYI +R LPDKAID++DE Sbjct: 412 FIEEPSTDRAIYILRKLSDKFESHHEMKISDEAIVAAVMLSHKYIRNRKLPDKAIDLLDE 471 Query: 405 AGARARL 411 A A R+ Sbjct: 472 AAATKRV 478 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 136/394 (34%), Positives = 197/394 (50%), Gaps = 71/394 (18%) Query: 416 KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIK 475 K++ + D+ V++ IP ++ ++ + L D L V GQD A++A+ +A+ Sbjct: 543 KQELVLTADDVAQVISLWTGIPLAKLTDDEKSKILRLSDLLHSRVIGQDDAVKAVADAMV 602 Query: 476 MARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE-------LLRFDMSEYMERH 528 ARAGL E PVGSFLF GPTGVGKTE L+KAL +E L+R DMSE+ E H Sbjct: 603 RARAGLSREGMPVGSFLFLGPTGVGKTE----LAKALAMEMFHSEKNLIRIDMSEFSEAH 658 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 +VSRLIG+PPGYVG D GG LT+AV + PH+V+L DEIEK H + NI+LQ++D G LTD Sbjct: 659 SVSRLIGSPPGYVGHDAGGQLTEAVRRRPHSVVLFDEIEKGHQQILNIMLQMLDEGRLTD 718 Query: 589 NNGRKADFRNVVLVMTTNAGVR---------ETERKSI--------GLIHQ--------- 622 G DF N V+++T+N G + E E K+ G + Q Sbjct: 719 GKGLLVDFTNCVIILTSNVGAQYIISAYEQAEKESKTALATFDPKSGNLEQFAEAAKGAE 778 Query: 623 -----DNSTDAMEEIKKI----------FTPEFRNR-LDNIIWFDHLSTDVIHQVVDKFI 666 D+S+ ++ K + E R + L I L +V+++ I Sbjct: 779 AASEGDDSSSEKKDKKGAVLDKNKKSGNWKKEARRKILSEIAGSGLLKPEVVNRFSGVII 838 Query: 667 VELQVQLDQKGVSLEVSQEARNWLAEKG-----------------YDRAMGARPMARVIQ 709 E D + + S++ +N L KG Y GARP+ R + Sbjct: 839 FEPMNPADVRKILAIQSKDLKNALQRKGIELVIDASAEEFIVQRSYTHKFGARPLKRFVD 898 Query: 710 DNLKKPLANELLFGSLVDGGQVT-VALDKEKNEL 742 +++ +A +L G L G +VT VA + KN L Sbjct: 899 NHIGAKMAPWILSGYLQPGMRVTVVASKRNKNTL 932 >UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterobacteriaceae RepID=Q7N4N8_PHOLL Length = 860 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 164/459 (35%), Positives = 254/459 (55%), Gaps = 27/459 (5%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELEAF 61 Q L+ ++N+A R H + +EHLLLAL P+ + +D + L L A Sbjct: 18 QCLDEAVNLAVRRT----HHEVEIEHLLLALFEKQLPTMEQVCHHGGIDSMTL---LNA- 69 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 +++ +L + T + + Q ++ G +++T ++VA+ Sbjct: 70 CQRSLALLRSGNHRPPVLATNLTEWMEQTWMYASTHWGASQITAQVLIVALIMNPS---- 125 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG---EERMENFTTNLNQ 178 H ++ + T EP + + P G + + +T +L Q Sbjct: 126 ----LHHSLTSELQQALQGNTDGIEPWLRTQTNTTPQHITAPVGDNTQSALAQYTHHLTQ 181 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR +DP++GRE+E+ + I VL RRR+NNPLL GE+GVGKTA+ EGLA RIV G VP+ Sbjct: 182 AARDNKLDPVLGREREIRQLIDVLLRRRQNNPLLTGEAGVGKTALIEGLAQRIVDGRVPK 241 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAAS 297 V+A +++LD+G L AG +G+FE R + LL ++++ T ILFIDE HT+IGAG Sbjct: 242 VLAQAELFTLDMGLLQAGASVKGEFESRLQKLLDEVKKYPTPVILFIDEAHTLIGAG-GQ 300 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 GQ DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ I + EPS+E + + Sbjct: 301 AGQNDAANLLKPALARGELRAIAATTWSEYKKYFEKDAALARRFQLIKVEEPSLELAIAM 360 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + + P E HH+V+ A+AV AV LA +YI R LPDK++ ++D A AR + VS+ Sbjct: 361 LRAITPAMEKHHNVKVLAEAVTEAVTLANRYITGRQLPDKSVSLLDSACAR---VAVSQT 417 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDT-LKNLGDR 455 + + D+ +++A IA E + + +T L+ L R Sbjct: 418 DEPAPIEDLRAMLANIAAEQEALLREGGHETQLQKLAQR 456 Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 104/256 (40%), Positives = 156/256 (60%), Gaps = 14/256 (5%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 V+ A + +VA IP + +++RD L+ L RL V GQD A+ + I++A+ Sbjct: 511 CVDAACVADIVAGWTGIPLGRMVENERDVLRQLETRLGQRVMGQDHALSQIARQIRIAKV 570 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGA 536 L KP G F+ AGP+GVGKTE + L+ L G E L+ +MSEY E H+VS L G+ Sbjct: 571 QLADPIKPTGVFMLAGPSGVGKTETALALAHELYGGEHHLITINMSEYQEAHSVSGLKGS 630 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG+ QGG+LT+AV + P++V+LLDE+EKAHPDV + QV D G + D G++ +F Sbjct: 631 PPGYVGYGQGGVLTEAVRRQPYSVVLLDEVEKAHPDVLELFFQVFDKGMMEDAEGQQINF 690 Query: 597 RNVVLVMTTNAGVRETERKSI-GLIHQ-DNSTDAME--------EIKKIFTPEFRNRLDN 646 RN ++++TTNA R ++ G+ Q +N +E E+++IFTP F RL Sbjct: 691 RNTLIILTTNAASDLVMRAAMHGVKEQGENRPATLEDIQEIIRPELQRIFTPAFLGRL-Q 749 Query: 647 IIWFDHLSTDVIHQVV 662 +I + + +V+H +V Sbjct: 750 VIPYLPVQGEVLHAIV 765 >UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3229B Length = 761 Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 128/244 (52%), Positives = 179/244 (73%), Gaps = 3/244 (1%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ F +L + ARVG ID +IGR+ E+E+ I+VL RRRKNN +L+GE+GVGKTAIAEGLA Sbjct: 106 LDQFGRDLTEDARVGRIDAVIGRDDEIEQTIEVLARRRKNNAVLIGEAGVGKTAIAEGLA 165 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEI 287 RI + +VPE + + I S+D+G ++AG ++RG FE+R K L++ + D +LFIDE+ Sbjct: 166 LRIARNEVPETLREVRIVSVDLGGMVAGAQFRGQFEQRLKTALEEVVATDGKVVLFIDEL 225 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HTI+GAG A G +DAANL+KPLL+ G++RV+G+TT E+ I EKD ALARRF + + Sbjct: 226 HTIVGAGGAEGA-MDAANLLKPLLARGELRVVGATTLAEYRKI-EKDGALARRFAAVHVE 283 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS+E TV I+ GL+P YE HH V+ A+ AA L+ +Y+ + HLPDKAID++D+A A Sbjct: 284 EPSVEATVAILRGLRPAYEEHHGVKIADAALDAAARLSDRYVTEYHLPDKAIDLMDQASA 343 Query: 408 RARL 411 R L Sbjct: 344 RVHL 347 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 135/325 (41%), Positives = 202/325 (62%), Gaps = 11/325 (3%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V D+ +VVA IP + + + L+ L L V GQD A+E + + I+ AR G Sbjct: 418 VTETDVAAVVAARTGIPVGELVAGELEKLQELEADLHARVVGQDGAVETVADTIRRARVG 477 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAP 537 L +P+G+FLF GPTGVGKTE+ LS+ L G E L+R DMSE+ E HTV+RLIG+P Sbjct: 478 LSEGDRPLGTFLFLGPTGVGKTELVKALSERLFGTEKSLVRIDMSEFREPHTVARLIGSP 537 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ GG LT+ V + P++V+LLDEIEKAHP+V+N+LLQVMD+G LTD GR DF Sbjct: 538 PGYVGYGDGGQLTEPVRRRPYSVVLLDEIEKAHPEVWNVLLQVMDDGRLTDGEGRTVDFA 597 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDN-------STDAMEEIKKIFTPEFRNRLDNIIWF 650 N VLVMT+N G +++++++G D + + K+ F PEF NR+D ++ F Sbjct: 598 NTVLVMTSNLGAPKSKKQALGFATSDGEGERGDVAAQMVAAAKRAFLPEFVNRIDELVVF 657 Query: 651 DHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 D LS + + ++ + + ++ +L ++ + LEV + L+ +G+D GARP+ R ++ Sbjct: 658 DALSAEQVERIGELIVERVEERLASERDIELEVEPKLIARLSREGFDPEYGARPLQRHVR 717 Query: 710 DNLKKPLANELLFGSLVDGGQVTVA 734 L+K L ++ G L DG +V + Sbjct: 718 RTLEKELTKAIVEGRLNDGDRVVAS 742 >UniRef50_Q4AAM9 ATP-dependent protease binding protein n=7 Tax=Mycoplasma RepID=Q4AAM9_MYCHJ Length = 692 Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 129/336 (38%), Positives = 213/336 (63%), Gaps = 21/336 (6%) Query: 415 SKRKKTVNVAD---IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 ++R++ NV D I VV+ +IP + + +S+ NL L + GQ++AI+A++ Sbjct: 359 ARRQEISNVLDESQIAKVVSNWTKIPIEKLLESEIQKYLNLEKNLAKSLKGQNQAIKAVS 418 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL-------LRFDMSEY 524 +AI +A + E +P+ SF F GPTGVGKTE L++AL + L +R DMSEY Sbjct: 419 DAILRFKAKINDESRPISSFFFMGPTGVGKTE----LARALALNLFNNKNQIIRLDMSEY 474 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 ME+H+VS+LIGAPPGY+GF+QGG LT+ V +P++++LLDEIEKAHP+V NI LQ++DNG Sbjct: 475 MEKHSVSKLIGAPPGYIGFEQGGNLTNKVRLNPYSIILLDEIEKAHPEVINIFLQILDNG 534 Query: 585 TLTDNNGRKADFRNVVLVMTTNAGVRET-ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNR 643 + D+ +K +FRN +++MT+N G + E K + N +A +E+ + PEF NR Sbjct: 535 EIVDSKSQKVNFRNTIIIMTSNIGANKILEGKKM------NEIEAKKELLRYLKPEFLNR 588 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 +D II F+ L+ D+I ++++ + +LQ +L + +E + +NW+ E GYD+ GARP Sbjct: 589 IDEIIVFNPLNYDIIFEIIELELKDLQNRLKENNFEIEFEKSVKNWILEFGYDKNFGARP 648 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 + R I+ ++ +A +++ ++ + ++ +K Sbjct: 649 IKRFIKKEIENFVAKKIVAEEILKDKKYNLSFKNDK 684 Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 134/377 (35%), Positives = 236/377 (62%), Gaps = 12/377 (3%) Query: 167 ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 E +E + NL +LA+ I+P+IGR+ E+ R I++L R+ KNNP+LVG+ GVGKTAI EG Sbjct: 6 ENLEKYARNLTKLAKENKIEPVIGRDDEIRRIIKILSRKTKNNPVLVGDPGVGKTAIVEG 65 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFID 285 +A +I+ VP+ + + I+ LD+ +LAG ++G+FEKR KA+L+++EQ+++ I+FID Sbjct: 66 MALKIIANQVPDNLKNKQIFELDLTLILAGASFKGEFEKRIKAILQEIEQNSDQVIIFID 125 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 EIH +IG G++ +D AN++KP+++ G+I++IG+TT E+ EKD AL RR QK++ Sbjct: 126 EIHLLIGTGSSGTDSMDFANILKPIMARGQIKLIGATTNSEYRLYIEKDGALERRMQKVE 185 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 I EPS+ +T+ I+ G+K + E H V+ A+ A + A +YI DR LPDKAID++DEA Sbjct: 186 ILEPSVIDTINILRGIKERLENFHQVKIKDSALVFATKAANRYIFDRFLPDKAIDLVDEA 245 Query: 406 GARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSD-RDTLKNLGDRLKMLVFGQD 464 A + + ++ + + + A E + ++ I + S+ + ++NL + +K L D Sbjct: 246 AASLK-VEINYQPEKLEKAKRELIYLKMEEINSQKQDNSELKSKIENLENEVKKLQDQWD 304 Query: 465 KAIEALTEAIKMAR--AGLGHEHKPV---GSFLFAGPTGVGKTEVTVQLSKALG-IELLR 518 ++ ++ +E +++ L ++ + G + A GK ++SK LG I+ R Sbjct: 305 QSKKSASEIASLSQELEKLKYQQNYLMEQGDYQKAAEIKYGKIP---KISKKLGEIKARR 361 Query: 519 FDMSEYMERHTVSRLIG 535 ++S ++ +++++ Sbjct: 362 QEISNVLDESQIAKVVS 378 >UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas RepID=C1EC57_9CHLO Length = 1033 Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 134/338 (39%), Positives = 205/338 (60%), Gaps = 16/338 (4%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V V +IE+V A + IP + ++ ++ L N+ L+ V GQ++A+ A++ +++ R G Sbjct: 612 VTVDEIEAVAAMWSGIPVQRMTLDEQAILANMDQDLQGSVIGQEEAVSAVSRSLRRTRCG 671 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLS-KALGIE--LLRFDMSEYMERHTVSRLIGAP 537 L ++P+ S LFAGPTGVGKTE+T +L+ K G E ++R DMSEYMERH+VS+L+GAP Sbjct: 672 LKDPNRPIASMLFAGPTGVGKTELTKRLAEKYFGSEDNMVRLDMSEYMERHSVSKLVGAP 731 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVGF QGG LT+AV + P +LL DEIEKAHPDVFNILLQ+M++G LTD+ GR F+ Sbjct: 732 PGYVGFGQGGTLTEAVRRKPFTILLFDEIEKAHPDVFNILLQMMEDGRLTDSQGRVVSFK 791 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTD-------------AMEEIKKIFTPEFRNRL 644 N ++V+T+N G + + GL Q D ++E+K F PE NRL Sbjct: 792 NCLIVLTSNVGSKVIAKGGGGLGFQLQDDDEEGSAEYKRIREKVLDELKNFFRPEMLNRL 851 Query: 645 DNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 D I+ F L + + ++ + E ++ KG+ + ++ A + L E G+D+ GARP+ Sbjct: 852 DEIVCFKQLEKESVQRIARLMLRETAGRMRLKGMEMALTASAMDKLLETGFDKEYGARPL 911 Query: 705 ARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 R I + L+ +L G + +G + D+ ++ Sbjct: 912 RRAITSIIDDNLSEAMLRGVIHEGDVAVIDYDRSSDQF 949 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 150/413 (36%), Positives = 238/413 (57%), Gaps = 14/413 (3%) Query: 12 MAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPA 71 +A A+ R + VEH+++ L++ + + V + + R++ + + Sbjct: 119 LAQQEAKALRRPEVGVEHIVMGLVAEEAKKGGWLGTGVTIDSAREKAKEIVSFDKDRAAR 178 Query: 72 SEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSR 131 + + +RV + A+ + + G N + ++ +A+ + SR Sbjct: 179 RTSTSEVPFSRGAKRVFEAALNNSTNMGMNYIAPEHIALAVAELDDESLVKYFEMLSTSR 238 Query: 132 LDVVNFISHGTRKDEPTQSSDPGSQPNS-------EEQAGGEER---MENFTTNLNQLAR 181 V N K E + S P ++PN+ ++QA ++ + +F +L Q AR Sbjct: 239 TFVKNEAERRL-KTEKEKESGPAARPNTSLAPRQRQQQASQKDEKSPLNDFCFDLTQRAR 297 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 IDP+IGR++E+ER IQ+L RR KNNP+L+GE GVGKTAIAEGLA RIV G+VPE + Sbjct: 298 DEKIDPIIGRDEEVERVIQILARRSKNNPILLGEPGVGKTAIAEGLALRIVSGNVPEFLR 357 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII---GAGAASG 298 + + SLD+G L+AG K RG+ E R L+K+++ + +L IDE+HT+I G G Sbjct: 358 EKRVLSLDVGLLMAGAKERGELESRVTGLIKEIQDKKDVVLMIDEVHTLIGAGAVGKGGG 417 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +D +N++KP L+ G+++ IG+TT E EKD AL RRFQ + + EPS E+ ++I+ Sbjct: 418 GGMDISNMLKPPLARGELQCIGATTVDEHRKYIEKDAALERRFQPVMVEEPSEEDAIEIL 477 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 GL+ +YEAHH T A+ AAV+++ +YI DR LPDKAID++DEAG+ AR+ Sbjct: 478 FGLRERYEAHHMCEITDDALIAAVQISSRYIADRFLPDKAIDLVDEAGSAARI 530 >UniRef50_C7RF24 ATPase AAA-2 domain protein n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RF24_ANAPD Length = 834 Score = 254 bits (650), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 160/415 (38%), Positives = 246/415 (59%), Gaps = 38/415 (9%) Query: 8 LSLNMAFARARE----HRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELEAF 61 L +MA AR ++++ +T HLL ++ N LE SVD L E+ Sbjct: 7 LKASMAIKEARNLALLNKNQEVTDLHLLKSVTDQENHVLDTMLEEFSVDKDNLTDEITKA 66 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRN----EVTGANVLVAIFSEQE 117 I + D L F R QR + + + + ++T +++ +A F ++ Sbjct: 67 IGKLRS--------NDGLSKLYFSRDYQRTLLLAKENAKKRYAEKITTSHLFLAFFDLEK 118 Query: 118 SQAAYLLRK----HEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFT 173 + + ++L K HE +VN K++ ++S+ S E+ G + ++ + Sbjct: 119 TTSKHILEKVGLSHEKCEQYLVN-------KEKEVENSERFS-----EKIG--DLIDKYG 164 Query: 174 TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +L + A+ G IDP+IG + E++R ++L RR KNNP+L+GE GVGK+A+ EGLA +I Q Sbjct: 165 IDLTKRAKEGKIDPVIGMDYEVDRLSEILTRRIKNNPILIGEPGVGKSAVVEGLALKIAQ 224 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIG 292 GDV + + D I+SL++ S+LAGT RG+FE R K L+ + + ILFIDEIHTI+G Sbjct: 225 GDVVDFLKDKIIFSLNVSSVLAGTGLRGEFESRVKDLMDIVTSFEGKIILFIDEIHTIVG 284 Query: 293 AGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIE 352 AG++SGG +D +N+IKP LS G+I +IG+TT E+ + EKD AL RRFQKI I E SIE Sbjct: 285 AGSSSGG-IDISNIIKPKLSRGEITIIGATTVAEYRSHIEKDGALERRFQKILIKEASIE 343 Query: 353 ETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 E+ I+ G+K YE H++ T +A++A V+L+ +YI DR LPDKAID++DEA + Sbjct: 344 ESYDILRGIKTNYENFHNLIITDEAIKACVDLSDRYITDRKLPDKAIDLMDEAAS 398 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 113/322 (35%), Positives = 193/322 (59%), Gaps = 16/322 (4%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I+++++RI +IP + ++Q ++ + N+ L V GQ +A+E ++ AI G+ + H Sbjct: 523 IKTLISRITKIPVEDLNQDRKEKILNIDKALGKKVIGQQEAVEKISNAIIRTAVGMKNRH 582 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL--GIE-LLRFDMSEYMERHTVSRLIGAPPGYVG 542 KP+G+FLF G TG+GKT + L+ L G E L+RFDMSEYM+ ++ ++ IGAPPG+VG Sbjct: 583 KPIGTFLFTGNTGLGKTYLAKVLADTLYEGEESLIRFDMSEYMDSNSTTKFIGAPPGFVG 642 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 +++GG LT+ V +P++V+L DEIEKA+ +F+ILLQ++D G LTDN G DF N +++ Sbjct: 643 YEEGGQLTEKVRINPYSVILFDEIEKANKQIFDILLQILDEGRLTDNRGITIDFTNTIII 702 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 662 +T+N L +D+S E+ + F PEF NRLD I+ F+ LS + + ++ Sbjct: 703 LTSNI-----------LAKEDDSDLYKHELYQYFKPEFINRLDAIVKFNTLSYEDLMEIT 751 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 ++ E++ + GV+ + E + + GAR + RV+ D + ++ ++L Sbjct: 752 KIYLEEVKNDFGEIGVNFAYTNEVIEKIVDLSDYEEFGAREIRRVVDDKIVTMVSRKILQ 811 Query: 723 GSLVDGGQVTVALDKEKNELTY 744 L +T+ L E +E ++ Sbjct: 812 DDLDSTNVLTIML--EDDEFSF 831 >UniRef50_Q83FI1 Chaperone protein clpB n=13 Tax=Bacteria RepID=CLPB_TROWT Length = 705 Score = 254 bits (649), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 136/309 (44%), Positives = 196/309 (63%), Gaps = 11/309 (3%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI SVV IP K + Q D L +L + L V Q AI + +A++ +RAGL Sbjct: 385 DIASVVEGWTGIPVKKLMQKDAKQLLHLEEDLSKSVIAQKVAIGVIADAVRRSRAGLSDP 444 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIELLRFDMSEYMERHTVSRLIGAPPGYVGF 543 ++P G+FLF GPTGVGKT++ L+ L E++R DMSEY E+ ++SRLIGAPPGY+G Sbjct: 445 NRPSGTFLFLGPTGVGKTQLVKALASLLYDGEIVRIDMSEYSEKFSISRLIGAPPGYIGH 504 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 + G LT++V + P++V+L DE EKAHP+VF+ILLQV+D G LTD++GR DFRN ++V+ Sbjct: 505 ESAGQLTESVRRRPYSVVLFDEAEKAHPEVFDILLQVLDEGRLTDSHGRTVDFRNTIIVL 564 Query: 604 TTNAGVRETERKSIGLIHQDNSTDAME----EIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 T+N G R S+ +T A E E+++ F PEF NRLD I+ F+ LS I Sbjct: 565 TSNIGSRYLSDISL------EATTAHEYVNDEVRRTFRPEFLNRLDEIVIFEPLSQSDIC 618 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719 Q+VD I L ++ + + + VS++ R WL++ GYD GARP+ R+IQ ++ LA Sbjct: 619 QIVDLNIESLNKRIKDRRIVVTVSEDLRRWLSKSGYDVIYGARPLRRLIQREIEDRLAKL 678 Query: 720 LLFGSLVDG 728 ++ G + DG Sbjct: 679 IIEGLIHDG 687 Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 122/243 (50%), Positives = 175/243 (72%), Gaps = 2/243 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ + TNL + A +DP+IGR+ E+ R Q+L RR KNNP+L+G +GVGKTAI EGLA Sbjct: 14 LDKYGTNLTKTAATNKLDPVIGRDAEIRRVCQILSRRTKNNPVLIGSAGVGKTAIVEGLA 73 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RIV GDVPE + + I SLD+ +LLAG YRG+FEKR K LL+++ Q + I+FIDE+H Sbjct: 74 QRIVAGDVPESLRNKEIVSLDLSALLAGASYRGEFEKRVKNLLEEI-QKSKVIIFIDEVH 132 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 T++ + A+ G + A N++KPLL+ G++R+IG+TT E+ EKD AL RRFQ++ + E Sbjct: 133 TLM-SAGAAEGAIAAGNMLKPLLARGELRLIGATTLDEYREHLEKDPALERRFQQVFVGE 191 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 P++E+ + I+ GLK +YEAHH V + A+ AVEL+ +YI R LPDKAID++DEA + Sbjct: 192 PNLEDCIAIMRGLKERYEAHHKVSISDTALVTAVELSSRYITGRQLPDKAIDLLDEAASS 251 Query: 409 ARL 411 R+ Sbjct: 252 LRM 254 >UniRef50_UPI000194EB59 PREDICTED: hypothetical protein, partial n=1 Tax=Taeniopygia guttata RepID=UPI000194EB59 Length = 480 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 137/338 (40%), Positives = 213/338 (63%), Gaps = 13/338 (3%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K+ V+ DI VV+R IP + QS+++ L +L L V GQ+ AI A+ +A++ + Sbjct: 142 KEEVDAEDIADVVSRWTGIPVNKMVQSEKEKLLHLEAELHQRVVGQEDAIRAIADAVRRS 201 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 RAGL +P+GSF+F G TGVGKTE+ L++ L + + R DMSEY E+H+VSRL+ Sbjct: 202 RAGLNDPRRPIGSFIFLGTTGVGKTELAKALAEYLFDDENMMTRIDMSEYQEKHSVSRLV 261 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++GG LT++V + P+ V+L DEIEKAHPD FNILLQV+D+G LTDN GR Sbjct: 262 GAPPGYVGYEEGGQLTESVRRKPYQVVLFDEIEKAHPDTFNILLQVLDDGRLTDNKGRNV 321 Query: 595 DFRNVVLVMTTNAG---VRETERK----SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 +F+N +++MT+N G +RE K + + ++ +E +K+ PEF NR+D I Sbjct: 322 NFKNTIIIMTSNMGSQLIRENFSKLTPQNKPKVVEETKAQVLEMLKENIRPEFLNRIDEI 381 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 I F L+ I ++V + +Q L + G+ L+++ +A ++LA++GYD GARP+ R Sbjct: 382 IMFTPLNRTEIEEIVGLQLHSIQRMLQKSSGIELKITPKALSYLADEGYDPEFGARPVKR 441 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 I + L+ ++L + +T+ D E ++L + Sbjct: 442 AIHRLVLNQLSKDILAQKVDRSHPITI--DVENDDLVF 477 >UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=HS104_YEAST Length = 908 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 147/405 (36%), Positives = 233/405 (57%), Gaps = 25/405 (6%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALL------SNPSAREALEACSVDLVALRQELEAFIE 63 L +A A +H+H + H+L A + S P + +E D ++ + + Sbjct: 15 LTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDYDLFKKVVNRNLV 74 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 + PA E P+ + +VLQ A + + + ++L A+F++ Q + Sbjct: 75 RIPQQQPAPAE---ITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFNDSSIQQIF- 130 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 + +++D+ T+ G+ N+ E + + ++ + AR G Sbjct: 131 ----KEAQVDIEAIKQQALELRGNTRIDSRGADTNTPL-----EYLSKYAIDMTEQARQG 181 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 +DP+IGRE+E+ I+VL RR K+NP L+GE G+GKTAI EG+A RI+ DVP ++ Sbjct: 182 KLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGA 241 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASGGQVD 302 ++SLD+ +L AG KY+GDFE+RFK +LK++E+ T +LFIDEIH ++G G+ D Sbjct: 242 KLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMG-----NGKDD 296 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 AAN++KP LS G+++VIG+TT E+ +I EKD A RRFQKI++ EPS+ +TV I+ GL+ Sbjct: 297 AANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQ 356 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 PKYE HH VR A+ A +LA +Y+ R LPD A+D++D + A Sbjct: 357 PKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCA 401 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 122/327 (37%), Positives = 198/327 (60%), Gaps = 9/327 (2%) Query: 422 NVAD---IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 NV D I AR+ IP K +S+S+ + L ++ L V GQ AI+A++ A++++R Sbjct: 539 NVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSR 598 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIG 535 +GL + +P SFLF G +G GKTE+ +++ L + ++R D SE E++ VS+L+G Sbjct: 599 SGLANPRQP-ASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLG 657 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 GYVG+D+GG LT+ + P++VLL DE+EKAHPDV ++LQ++D+G +T G+ D Sbjct: 658 TTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTID 717 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 N +++MT+N G + I + M +++ F PEF NR+ +I+ F+ LS Sbjct: 718 CSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSR 777 Query: 656 DVIHQVVDKFIVELQVQLDQ--KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 IH++VD + E++ + +Q K L ++QEA+++LA+ GY MGARP+ R+IQ+ + Sbjct: 778 KAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEIL 837 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKN 740 LA +L + D V V L K K+ Sbjct: 838 NKLALRILKNEIKDKETVNVVLKKGKS 864 >UniRef50_A6V7C9 Type VI secretion ATPase, ClpV1 family n=10 Tax=Gammaproteobacteria RepID=A6V7C9_PSEA7 Length = 875 Score = 251 bits (641), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 126/262 (48%), Positives = 174/262 (66%), Gaps = 2/262 (0%) Query: 151 SDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNP 210 S P S + GGE ++ FT NL Q AR G +DP++ R+ + + + +L RRRKNNP Sbjct: 148 SQPLEGAPSGKPGGGESLLQRFTHNLTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNP 207 Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 ++VGE+GVGKTAI EGLA RI G+VP + D + SLD+G L AG +G+FE+R K + Sbjct: 208 IVVGEAGVGKTAIVEGLASRIAAGEVPPALRDVELLSLDMGLLQAGASVKGEFERRLKGV 267 Query: 271 LKQLEQDTN-SILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSN 329 + +++ +ILFIDE HT+IGAG +GG DAANL+KP L+ G++R I +TT+ E+ Sbjct: 268 IDEVKAALRPTILFIDEAHTLIGAGGQAGGS-DAANLLKPALARGELRTIAATTWAEYKK 326 Query: 330 IFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYI 389 FEKD ALARRFQ + + EPS+ E V I+ GL YE H + AV AA EL+ +Y+ Sbjct: 327 YFEKDPALARRFQPVQLHEPSVAEAVTILRGLARVYEESHGIYLRDDAVVAAAELSARYL 386 Query: 390 NDRHLPDKAIDVIDEAGARARL 411 R LPDKA+D++D A AR R+ Sbjct: 387 AGRQLPDKAVDILDTACARVRI 408 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 169/307 (55%), Gaps = 17/307 (5%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + V++ +P + +++ + D L+ + GQ++AI AL +++ +GL Sbjct: 548 VAEVISAWTGVPVEQLAREHNAKVVGFADDLRARIRGQEQAIRALDRSMRATASGLNKPD 607 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVG 542 P G FL GP+GVGKTE + L+ L G E + +MSE+ E+H+VSRLIGAPPGYVG Sbjct: 608 APAGVFLLVGPSGVGKTETALALADLLYGGERFITTINMSEFQEKHSVSRLIGAPPGYVG 667 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + +GG+LT+AV + P++V+LLDE+EKA PDV N+ Q+ D G D G + DFRN + + Sbjct: 668 YGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDRGVANDGEGHEIDFRNTLFL 727 Query: 603 MTTN-------AGVRETERKSIGLIHQDNSTDAMEEI-KKIFTPEFRNRLDNIIWFDHLS 654 MT+N A R+ ER S ++ D + + + F P R+ ++ + + Sbjct: 728 MTSNLASERIAALCRDGERPSPEILE-----DTIRPVLSQHFKPALLARM-RVVPYYPVG 781 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 V+ +++ + L +L ++ ++ + S + L E+ GAR + ++ +L Sbjct: 782 GRVLRELIGIKLDRLGERLARRHLAFDYSSALVDHLGERCIQSDSGARLIDHLLDTHLLP 841 Query: 715 PLANELL 721 +A+ LL Sbjct: 842 LVADRLL 848 >UniRef50_A9FG71 ATPase with chaperone activity, two ATP-binding domains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FG71_SORC5 Length = 871 Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 139/345 (40%), Positives = 203/345 (58%), Gaps = 11/345 (3%) Query: 403 DEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG 462 +EA R + P S V +D+ + + IP + + + + L + RL V G Sbjct: 524 EEAAQREGVAPTSN---VVAESDVAATLNDWTGIPVAKMLEGEAEKLLKMEARLAQRVVG 580 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRF 519 QD+A+ A+ +A++ R GL KP+GSFLF GP+GVGKTE+ L++ L + L R Sbjct: 581 QDEAVRAIAKAVRRGRVGLRDPGKPIGSFLFLGPSGVGKTELAKALAEFLFDDEQALTRM 640 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DMSE+MERH RLIGAPPGY +QGG LT+A + P++VLL DE+EKAH DVFN+LLQ Sbjct: 641 DMSEFMERHMAQRLIGAPPGYADSEQGGFLTEAARRRPYSVLLFDEVEKAHADVFNLLLQ 700 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA-----MEEIKK 634 ++D+G LTD GR ADF N V++MT+N G + L ++ +A +EE++ Sbjct: 701 ILDDGRLTDGRGRLADFSNTVVIMTSNIGSKRVLETDAKLWTTEDGREAIRDVLLEELRG 760 Query: 635 IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKG 694 F PEF NR+D+I+ F LS + + +VD + L+ L K + L ++ A+ L E G Sbjct: 761 FFRPEFLNRVDDIVVFKALSKEDLRGIVDIQLRRLEQLLTDKDIRLALTDAAKARLVELG 820 Query: 695 YDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 Y+ ++GARP+ R I L+ PLA +L G G + V + EK Sbjct: 821 YEPSLGARPLKRAILRELQNPLAETILAGGYQPGQTMQVDVVDEK 865 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 115/264 (43%), Positives = 162/264 (61%), Gaps = 8/264 (3%) Query: 150 SSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNN 209 S +P P + + G + +T +L AR G DP+IGR+ E R +Q+L RR KN+ Sbjct: 153 SREPSPAPANAAEPG---QPAPYTRDLVADAREGRFDPVIGRDVEARRLLQILERRFKNH 209 Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKA 269 PL+VGE GVGKTA+ GLA RI GDVP +A +Y LD G+L+AG K RG+ E+R K Sbjct: 210 PLIVGEPGVGKTALIRGLADRIAHGDVPTNLAGAHLYELDTGALVAGAKLRGEIEQRLKV 269 Query: 270 LLKQL--EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEF 327 L+ +L EQD SIL ++++ + L+KPLLS G+IR+I +TT + Sbjct: 270 LVDRLRGEQDAESILVVEDLDALF---GQGVQGAGVGELLKPLLSRGEIRIIATTTPEGV 326 Query: 328 SNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK 387 I E+D + RRF I + PSI++ +I+ G+ KYEAHH VR A+ +AV LA + Sbjct: 327 RKINERDPGIIRRFSTITLEAPSIDQATEILRGIATKYEAHHRVRVGESAITSAVALAKR 386 Query: 388 YINDRHLPDKAIDVIDEAGARARL 411 YI+DR LPD A+D++DE AR R+ Sbjct: 387 YISDRALPDTAVDLLDETSARKRV 410 >UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Proteobacteria RepID=A6FZR3_9DELT Length = 921 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 122/242 (50%), Positives = 171/242 (70%), Gaps = 2/242 (0%) Query: 171 NFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWR 230 FT +L Q AR G IDP+ GR +E+ + + +L RRRKNNP++VGE GVGKTA+ EGLA + Sbjct: 190 QFTVSLTQEARDGRIDPIFGRHREIRQIVDILARRRKNNPIIVGEPGVGKTALVEGLALQ 249 Query: 231 IVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHT 289 IV GDVP+++ + + +LD+G L AG +G+FEKR KA++ +++ T ILFIDE HT Sbjct: 250 IVSGDVPDLLKNVELIALDMGLLQAGASVKGEFEKRLKAVISEVKASPTPIILFIDEAHT 309 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 +IGAGA GG DA+NL+KP L+ G++R + +TT+ E+ FEKD AL RRFQ + EP Sbjct: 310 LIGAGANKGGS-DASNLLKPALARGELRTVAATTWSEYKKYFEKDPALERRFQPVKCDEP 368 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 S+E+ V ++ GL KYE H V +AV AA EL+ +YI+ R LPDKA+D++D A AR Sbjct: 369 SVEDAVVMLRGLAGKYEEAHGVTIRDEAVVAAAELSGRYISGRQLPDKAVDLLDTAAARV 428 Query: 410 RL 411 ++ Sbjct: 429 KI 430 Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 105/308 (34%), Positives = 168/308 (54%), Gaps = 18/308 (5%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + VVA IP + ++ L D L V GQ+ A+ ++E ++MA AG+ + Sbjct: 592 VAKVVANWTGIPVGKMKADTIGSVLALEDVLGSRVKGQEPAVRVVSETVRMAYAGVRDPN 651 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL--GIELLR-FDMSEYMERHTVSRLIGAPPGYVG 542 P+G LF G +GVGKTE+ + L+ L G + +MSE+ E+HTVSRLIG+PPGYVG Sbjct: 652 TPIGVLLFVGTSGVGKTEMALSLADQLYGGDRFMTTINMSEFQEKHTVSRLIGSPPGYVG 711 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + +GG+LT+AV + P++V+LLDE EKA PDV N+ QV D G L D GR DFRN +++ Sbjct: 712 YGEGGMLTEAVRQRPYSVVLLDECEKADPDVMNLFYQVFDKGVLNDGEGRTVDFRNTIII 771 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKI--------FTPEFRNRLDNIIWFDHLS 654 +T+N +I ++Q + A EE+ + F P R+ ++ F + Sbjct: 772 LTSNLA-----SDTIMRLYQGDEAPATEEVVEAIRPTVSAHFKPALLARM-TMVPFRPIG 825 Query: 655 TDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 +++ ++ + +L+ +L + + S E + L + D GAR + ++ +L Sbjct: 826 PEIMREIAILKLRKLERRLRETHEIETTFSDELLDELVRRCTDADTGARNVDHTLRASLM 885 Query: 714 KPLANELL 721 LA LL Sbjct: 886 PALARTLL 893 >UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 RepID=B7VTU3_VIBSL Length = 897 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 130/288 (45%), Positives = 180/288 (62%), Gaps = 9/288 (3%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + FTT+ AR G IDP+ R++E+ + I +L RRRKNNP+ VGE GVGKTA+ EGLA Sbjct: 176 LSKFTTDFTGKARKGEIDPVFCRDQEIRQIIDILARRRKNNPIAVGEPGVGKTAVVEGLA 235 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEI 287 +I +GDVP+ + +Y LD+G L AG +G+FEKR A+L +++ T ILFIDE Sbjct: 236 LKITEGDVPDCLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEA 295 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT++G G +GG DAANL+KP L+ G+++ I +TT+ E+ FEKD ALARRFQ + + Sbjct: 296 HTLVGGGNQAGGS-DAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLD 354 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS + II GL+P YE H+V A+ AA LA +YI R LPDKAIDV+D A A Sbjct: 355 EPSASQAALIIRGLRPAYEKSHNVYVRDDAITAAANLADRYITGRQLPDKAIDVLDTACA 414 Query: 408 RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 R + A +E++ IA + + +RD L+ GD+ Sbjct: 415 RVNI------SLNATPAPVETLHQEIA-AANRELEALERDQLQQTGDK 455 Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 126/336 (37%), Positives = 179/336 (53%), Gaps = 22/336 (6%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 +I V++ IP + Q + NL L + GQ+ AI+AL E I+ A+AGLG+ Sbjct: 569 EISHVISDWTGIPMGKMLQDESQATLNLKQNLIQNIKGQEFAIDALAEGIQTAKAGLGNP 628 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLS-KALGIE--LLRFDMSEYMERHTVSRLIGAPPGYV 541 P G FL GP+GVGKTE ++ + G E + +MSE+ E+HTVSRLIG+PPGYV Sbjct: 629 DAPTGVFLLVGPSGVGKTETARAIADQMFGGERFMTTINMSEFQEKHTVSRLIGSPPGYV 688 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 GF +GG+LT+AV + P++V+LLDE+EKA P+V N+ QV D GTL D GR DF+N ++ Sbjct: 689 GFGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQVFDKGTLNDGEGRTIDFKNTLI 748 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDA---MEEIKKI----FTPEFRNRLDNIIWF---D 651 +MT+N E E L+HQ DA E I+ F P R+ + + D Sbjct: 749 IMTSNLATHEIE----SLVHQAKDIDANIVAEAIRPTLNQHFKPALLARMSVLPFLPLSD 804 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 TD+IH + K LQ ++L ++ GAR + VI Sbjct: 805 AAMTDIIHHKLKKVSERLQ---SHHKLALCYGDNLVEFVLGNCRLAETGARNIDAVINRQ 861 Query: 712 LKKPLANELLFGSLVDG-GQVTVALDKEKNELTYGF 746 L L+ +LL D Q+ V++D E+ LTY F Sbjct: 862 LLPQLSTQLLVNDKDDSHTQIEVSVD-EQGTLTYAF 896 >UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=Gammaproteobacteria RepID=Q88IA4_PSEPK Length = 878 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 131/322 (40%), Positives = 200/322 (62%), Gaps = 10/322 (3%) Query: 99 GRNEVTGANVLVAIFSEQESQAAYLLRKHEVS-------RLDVVNFISHGTRKDEPTQSS 151 G +V A++L A+ + E + + E+ RL++ + + + + Sbjct: 118 GVGQVRSAHLLQALLDDAELRRVVIASAPELEKINADDLRLNLAALVEGSAESRQASPLA 177 Query: 152 DPGSQPNSEEQAGGE-ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNP 210 P + ++ +A G+ ++ +T NL Q AR G IDP++GRE E+ + + +L RRR+NNP Sbjct: 178 SPAAPVSTSSKASGKTPALDQYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNP 237 Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L GE+GVGKTA+ EGLA RI QGDVP V+ D +++LD+G L AG +G+FE R KA+ Sbjct: 238 ILTGEAGVGKTAVVEGLALRIAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAV 297 Query: 271 LKQLEQDTNSI-LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSN 329 ++++++ + I LFIDE HT+IG+G GQ DAANL+KP L+ G++R I +TT+ E+ Sbjct: 298 IEEVKRSLHPIILFIDEAHTLIGSGG-QAGQNDAANLLKPALARGELRTIAATTWAEYKK 356 Query: 330 IFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYI 389 FEKD ALARRFQ + + EP ++ + ++ GL K HH V +A+ AV L+ +YI Sbjct: 357 YFEKDAALARRFQVVKVEEPDEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYI 416 Query: 390 NDRHLPDKAIDVIDEAGARARL 411 R LPDKA+ V+D A AR L Sbjct: 417 TGRQLPDKAVSVLDTACARIAL 438 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 114/321 (35%), Positives = 176/321 (54%), Gaps = 33/321 (10%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ I V++ IP + + + DT++ L L V GQD A+ + + IK++RA Sbjct: 544 VDSGAIAQVISGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIGKRIKISRAR 603 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAP 537 + +KP+G FL GP+GVGKTE + L+ L G E L+ +MSEY E HTVS L G+P Sbjct: 604 MEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHTVSSLKGSP 663 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ +GG+LT+AV + P++V+LLDE+EKAHPDV + QV D G L D GR+ +FR Sbjct: 664 PGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFR 723 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIK----KIFTPEFRNRLDNIIWFDHL 653 N V+++T+N G + + +E+++ +F P F RL + ++ Sbjct: 724 NTVIILTSNTGTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFLGRLSIVPFY--- 780 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAM-------------G 700 V Q++++ IV L+++ K + ARN AE YD+A+ G Sbjct: 781 --PVQDQILER-IVALKLERIAK-------RFARNHQAELSYDQALVKAIAARCTEVDSG 830 Query: 701 ARPMARVIQDNLKKPLANELL 721 AR + ++ L LA +L Sbjct: 831 ARNIDNILSQTLMPELAQRVL 851 >UniRef50_Q7NAZ3 Chaperone protein clpB n=5 Tax=Mollicutes RepID=CLPB_MYCGA Length = 717 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 118/246 (47%), Positives = 174/246 (70%), Gaps = 2/246 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + ++ NLN IDP IGRE+E+ R I++L R+ KNNP+L+GE GVGKTAI EG A Sbjct: 14 LSKYSRNLNDEIARNAIDPTIGREEEIRRLIEILSRKNKNNPVLIGEPGVGKTAIVEGFA 73 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEI 287 +IV GDVP+ + D + L + SL+AGT+++G FE+R +LK+++ + ILFIDEI Sbjct: 74 RKIVNGDVPDNLKDVEVVELSLSSLIAGTQFQGSFEERLNKILKEVKNSSGKVILFIDEI 133 Query: 288 HTIIGAGA-ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 H ++G G +S +DAAN++KP+++ G+I+VIG+TT E+ EKD AL RR QKI + Sbjct: 134 HQLVGMGKNSSNSAMDAANILKPMMARGEIKVIGATTIDEYRKYIEKDGALERRMQKILV 193 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EP+ +E + I+ GL+ ++EA H VR A+ AAVE++ +YI+DR+LPDKAID+IDEA Sbjct: 194 DEPTKQEALTIMRGLRERWEAFHKVRIFDDALVAAVEMSARYISDRYLPDKAIDLIDEAA 253 Query: 407 ARARLM 412 A+ + + Sbjct: 254 AKIKTL 259 Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 122/329 (37%), Positives = 199/329 (60%), Gaps = 11/329 (3%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K +++ +I V+++ +IP + S++ L NL + L + GQD AI+ +++A+ Sbjct: 388 KTSISRVEIAEVISQATKIPLSKLVASEQQKLLNLKNDLSKYIKGQDHAIKNVSDAVLRG 447 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLI 534 RA + ++P+GSFLF GPTGVGKTEV +L+ L ++R DMSE+MERH+V +LI Sbjct: 448 RAQINDPNRPIGSFLFLGPTGVGKTEVAKKLAYCLFDNEKAMVRIDMSEFMERHSVDKLI 507 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 G+PPGY+G+DQ G+L+DA+ P+AV+L DEIEKAHPDV NILLQ++D+G LTDN+ R Sbjct: 508 GSPPGYIGYDQPGVLSDAIRTKPYAVVLFDEIEKAHPDVLNILLQILDDGQLTDNHNRLV 567 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 +F+N +++MT+N G I +N +EE+K+ PE NR+D +I F L+ Sbjct: 568 NFKNTIIIMTSNIGAEH--------ILANNPAKTIEELKRKIRPELLNRIDELITFKALN 619 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + + K + +L ++ ++ +++ ++ + + G + GARP+ R IQ ++ Sbjct: 620 DKDLSAIAQKLLSDLSDRIKKQQINITFDKKIVENVVKHGSNTVFGARPLKRYIQREVEN 679 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNELT 743 LA +++ L + E NE T Sbjct: 680 FLAKKIIENKLEKNKSYVCTFNAETNEYT 708 >UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=Moritella sp. PE36 RepID=A6FFT5_9GAMM Length = 865 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 122/241 (50%), Positives = 169/241 (70%), Gaps = 2/241 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ FT +L + AR G +DP++GR+ E+ + + +L RRR+NNP+L GE+GVGKTA+ EGLA Sbjct: 180 LDQFTVDLTEKARNGKMDPILGRDPEIRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLA 239 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEI 287 RIV DVPE + + LD+ L AG +G+FE R KA+L +++Q T ILFIDE Sbjct: 240 QRIVAKDVPESLQHVQLRELDLALLQAGAGMKGEFENRLKAVLNEVKQSATPIILFIDEA 299 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT+IGAG A+ GQ DAAN++KP L+ G++R I +TT+ E+ FEKD AL RRFQ + I Sbjct: 300 HTMIGAGGAA-GQNDAANILKPALARGELRTIAATTWAEYKKYFEKDPALTRRFQVVKIE 358 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS+ V ++ G+ P E HHDV TA A++AAV L+ +YIN R LPDKA+ ++D A A Sbjct: 359 EPSVPTAVIMLRGILPVMEQHHDVVITADALQAAVALSKRYINGRQLPDKAVALLDSACA 418 Query: 408 R 408 R Sbjct: 419 R 419 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 109/309 (35%), Positives = 172/309 (55%), Gaps = 19/309 (6%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I V++ IP ++Q + +T+ NL +K V GQD AI+ + ++++RA L E Sbjct: 537 ICEVISDWTGIPLGKMAQDELETVLNLSAEMKTRVIGQDHAIDLIARTVQISRAQLSDES 596 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLS-KALGIE--LLRFDMSEYMERHTVSRLIGAPPGYVG 542 KP G F+ GP+GVGKTE + L+ + G E ++ +MSEY E H VS L+G+PPGYVG Sbjct: 597 KPNGIFMLTGPSGVGKTETALTLAEQVYGSEENIITINMSEYKEEHKVSLLLGSPPGYVG 656 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 F +GG+LT+AV ++P++V+LLDEI+KA P V +I Q+ D G + D GR DF+N +++ Sbjct: 657 FGEGGVLTEAVRRNPYSVVLLDEIDKAAPGVQDIFYQIFDKGCVKDGEGRDIDFKNTIII 716 Query: 603 MTTNAGVRETERKSIGLIHQDNST----DAMEEIKK-----IFTPEFRNRLDNIIWFDHL 653 MT+N G +I + D T D++ + K F P F R NII F L Sbjct: 717 MTSNVGT-----DTITALFADPDTAPELDSLADCIKGDLMAAFKPAFLGRA-NIIPFVPL 770 Query: 654 STDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 + D++ + I L ++ + V E + + +D A GAR + +Q+ L Sbjct: 771 TDDMLSTIAQLQINRLAARIRRNHNAEFIVDNEVITQIVSRCHDVASGARTIHNYLQNTL 830 Query: 713 KKPLANELL 721 ++ ++L Sbjct: 831 LPEISVQVL 839 >UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Bermanella marisrubri RepID=Q1N528_9GAMM Length = 859 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 160/432 (37%), Positives = 239/432 (55%), Gaps = 40/432 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSV-DLVALRQEL 58 L L++SL A A H + + +EH +++L++P E ++ C V +L LR++L Sbjct: 13 LTPTLKMSLEEAAQLAMTHGNFNVEIEHWFISMLNHPHTDFLELIKKCQVIELDNLREDL 72 Query: 59 EA---FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-----SSGRNEVTGANVLV 110 A + E PA F R L + + ++T A++ + Sbjct: 73 AASLQYFESGNTRAPA------------FSRHLMECLNEAWLLASVDQDKEQITSAHIFI 120 Query: 111 AIFSEQESQAAYLLRKHEVSRLDVVNF-----ISH---GTRKDEPTQSSDPGSQPNSEEQ 162 A + S A+ +R V LD VN +SH G + +S P S +++ + Sbjct: 121 AAM--KNSGIAHQIRSI-VPSLDGVNVADLEALSHTIIGKTSESAIES--PQSSESTQSK 175 Query: 163 AGGEE--RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 G + + + +L A G IDP+IGR+ E+ + + VL RRR+NNP+L GE GVGK Sbjct: 176 QGNTQANYLSKYAVDLTAKAEAGEIDPVIGRDDEVRQLVDVLLRRRQNNPILTGEPGVGK 235 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 280 TA+ EGLA RIV DVP+ + + SLD+ SL AG +G+FEKR KA++++++ T Sbjct: 236 TAVVEGLANRIVANDVPQPLQGIRLLSLDMASLQAGASVKGEFEKRLKAVIEEVKTATVP 295 Query: 281 IL-FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 I+ FIDE HTIIGAG A G DAANL+KP L+ G+ R I +TT+ E+ FEKD AL R Sbjct: 296 IIVFIDEAHTIIGAGGAEGTG-DAANLLKPALARGEFRTIAATTWSEYKKYFEKDPALTR 354 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 399 RFQ + + EPSIE + ++ L E HH+V +A+ A+V+LA +YI R LPDK++ Sbjct: 355 RFQVVKVEEPSIESAIDMMRSLASTLEQHHNVTILDEAIEASVKLAARYIPARQLPDKSV 414 Query: 400 DVIDEAGARARL 411 ++D A AR L Sbjct: 415 SLLDTACARVAL 426 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 108/307 (35%), Positives = 173/307 (56%), Gaps = 17/307 (5%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + +++ IP ++ Q + + L +L D LK V GQD A++ + +A++++R+GL Sbjct: 533 VAAIIESWTGIPVGNMMQDEINGLLSLEDELKKRVVGQDHAMQKIAQAVRISRSGLTDPR 592 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVG 542 KPVG F+ AG +G GKTE + L++ L G E L+ +MSE+ E H VS L+GA GYVG Sbjct: 593 KPVGVFMMAGTSGTGKTETALALAEHLYGGEDNLITINMSEFKEEHKVSMLLGASAGYVG 652 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + QGG+LT+AV K P++V+LLDE+EKAHP + ++ + D GT+ D G DF+N +++ Sbjct: 653 YGQGGVLTEAVRKKPYSVVLLDEMEKAHPGIQDVFYNLFDKGTIKDGEGNDIDFKNTLII 712 Query: 603 MTTNAGVR-------ETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 MTTNA ET+ L+ D E+ + F P F R + +F LS Sbjct: 713 MTTNAATHGISKYFGETDINEEALLE-----DIRPELLEDFRPAFLGRCTIVPYFP-LSE 766 Query: 656 DVIHQVVDKFIVELQVQLD-QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 DV+ ++++ +++ +L+ Q SL+ L K D GAR + VI ++ Sbjct: 767 DVLQKIIEINFNKIKKRLNEQYNASLKYDASILEHLLSKCKDPDTGARNVENVINKSILP 826 Query: 715 PLANELL 721 ++N L Sbjct: 827 AISNACL 833 >UniRef50_UPI00016C3DF7 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DF7 Length = 1108 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 177/574 (30%), Positives = 290/574 (50%), Gaps = 54/574 (9%) Query: 194 ELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 EL R +++ RR LL G VGK+AI +R V + + L Sbjct: 221 ELHRLLELGDRR---PVLLCGPRLVGKSAIVHECVYRRVAERKANQRQWFNTWLVSPQRL 277 Query: 254 LAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS 313 ++G Y G +E R A+LK ++ + +L+ D++ + AG S + AA ++KP L Sbjct: 278 ISGMSYVGQWEGRLLAILKHAKK-RDHVLYFDDLLGLFLAGVTSQSSLSAAVVLKPYLER 336 Query: 314 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 +RV+ T + + E+DR L+ F I + +P+ +T++++ + + E H + Sbjct: 337 RDVRVLAEITPESLRVLQERDRGLSDLFHIIPVRQPTDADTLRVLVDQQRRLEGKHACVF 396 Query: 374 TAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 433 + A ++ +Y P KA V+ RA P + A++ S R Sbjct: 397 GLDVLPAVIDQQRRYDRTAAFPGKAAAVLTRLAVRATTNPDER------AAEVGSSATRP 450 Query: 434 AR----IPEKSVSQSD-----------------------RDTLKNLGDRLKMLVFGQDKA 466 A P +++ D RD ++ D+L+ V GQ A Sbjct: 451 ADGYEFPPRPEITRDDVLNDFAARSGLSLAFLDPKQRLDRDAVR---DKLQEQVIGQPDA 507 Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSE 523 ++AL + + +A+A L +P+ +FLF GPTGVGKTE +++ L LLRFD++E Sbjct: 508 VDALADVVSVAKARLNDPDRPLAAFLFLGPTGVGKTECAKAIARTLFGDSDRLLRFDLNE 567 Query: 524 YMERHTVSRLIGAPPGYVGFDQG-GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 Y + +RL+G F Q GLLT A+ + P AV+LLDEIEKA P+VF++LLQ++ Sbjct: 568 YNQPGAAARLVGT------FQQPEGLLTSAIRRQPFAVVLLDEIEKADPEVFDLLLQLLG 621 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQ-DNSTDAMEEIKKIFTPEFR 641 G LTD+ GR ADF + +++MT+N GVR+ E ++G + + D S +K F PEF Sbjct: 622 EGRLTDSLGRTADFTSALVLMTSNLGVRDAE-GNLGFVTEADRSFAYTRAAEKFFRPEFF 680 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAM 699 NRLD +I F LS + + ++ + + E+ + Q+ L V+ +A + + + GYD A+ Sbjct: 681 NRLDRVIPFRKLSREEMARIARRLVGEVLAREGFSQRKCVLNVAPDALDRVIQAGYDPAL 740 Query: 700 GARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 GAR M R ++ L +P A+ L ++ D VTV Sbjct: 741 GARAMKRAVEHELTQPAASRLAALAVNDLTIVTV 774 >UniRef50_Q1D2Y8 ClpA/B family protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D2Y8_MYXXD Length = 1127 Score = 245 bits (625), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 175/573 (30%), Positives = 292/573 (50%), Gaps = 22/573 (3%) Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTA-IAEGLAWRIVQ 233 NL+ AR G ++ GRE + ++ L R + +LVG G GKTA I E ++ + Sbjct: 222 NLSHGARDGTLERCFGREALVRELVEALEGREGSALVLVGPPGAGKTALIHEAVSRLTAR 281 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 D V D ++ +D +AG Y G +E R + ++K+L + +L++D++ +++ A Sbjct: 282 QDAAGVRRD--VWRVDGNQFIAGMMYVGQWEARARGVVKEL-MEVGDLLYVDDLASLVYA 338 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G + + A ++P ++ G++ V+ +T + F + E+ LA F+ I + Sbjct: 339 GRTRNERTNVAQFLEPHMARGELTVLAESTPERFERVREEAPTLASLFRVIHVPALDARA 398 Query: 354 TVQIINGLKPKYEAH---HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR 410 T+ + G EA V+ + A+ + L ++++ P KA+ ++ AR Sbjct: 399 TLPALLGTVRDLEAEGTDSAVQLSPLALETLLSLQERFVSHEAFPGKAVRLLRRVMARQG 458 Query: 411 LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 + R+ + D+ + +P+ + + + L ++ V GQ +A+EA+ Sbjct: 459 VSTSGTRR--FSSGDVIDAMREQTGLPDFILGSAQPKKREALTWEMQRQVAGQPEAVEAV 516 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMER 527 +AI ++ L KP+ ++LF GPTGVGKTE L++ L G E L+RFDMSE++ Sbjct: 517 VDAILTLQSALQPSDKPLATYLFVGPTGVGKTETAKALARTLFGGEQRLIRFDMSEFVTS 576 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 +++RL+G P G LT A+ P V+L DE+EKAHP VF+ LLQ + G LT Sbjct: 577 SSITRLLGRPGA-----PDGELTTALRTQPFCVVLFDEVEKAHPRVFDALLQFLGEGRLT 631 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA--MEEIKKIFTPEFRNRLD 645 D GR D R V+V+T+N GVRE + G +S DA + ++ F PEF NRLD Sbjct: 632 DGAGRTVDARQSVVVLTSNLGVREAATHT-GFHRAADSADAHYLSAVRAWFRPEFFNRLD 690 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 ++ F L+ + VVD + L + + Q V +EV + L E+ YD GARP Sbjct: 691 RVVPFRPLTPAALRVVVDLALEALLSRHGIRQGNVLVEVEPRLLDLLVEEAYDPRYGARP 750 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 + R ++ L PLA+ L+ S D +V + D Sbjct: 751 LKRALEKRLTLPLAHHLVRRSADDLARVELLRD 783 >UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organisms RepID=CLPB2_SYNPX Length = 900 Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 119/249 (47%), Positives = 179/249 (71%), Gaps = 4/249 (1%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +E + +L + A G +DP+IGR+ E+ I+VL RR KNNP+L+GE GVGKTAIAE LA Sbjct: 199 LEAYGRDLTEEAEAGSLDPVIGRDSEIRNLIKVLSRRSKNNPVLIGEPGVGKTAIAELLA 258 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEI 287 RIV G+VP+ + + +LD+G+L+AG K+RG FE+R +++L+++ + D+ +LFIDE+ Sbjct: 259 QRIVAGEVPDSLQGLRLIALDLGALIAGAKFRGQFEERLRSVLEEVSRSDSGVVLFIDEL 318 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT++G+ +S DA +L+KP L+ G +R IG+TT +E+ EKD AL RRFQ++ I Sbjct: 319 HTVVGSDRSS---TDAGSLLKPALARGDLRCIGATTPEEYRRTVEKDPALNRRFQQVLIR 375 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EP +E +++I+ GL+ +YE HH V T +A++ A LA +YI+DR LPDKAID+IDEA A Sbjct: 376 EPDLELSLEILRGLRERYELHHGVTITDEAIQTANRLADRYISDRCLPDKAIDLIDEAAA 435 Query: 408 RARLMPVSK 416 + ++ SK Sbjct: 436 QLKIEVTSK 444 Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 158/399 (39%), Positives = 237/399 (59%), Gaps = 30/399 (7%) Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT-AKAVR-AAVELAVKYINDR-H 393 L RR+Q+ +EE Q++ + D+R+ A+A R A+E A + D+ H Sbjct: 490 LRRRWQE---ERTQLEELGQLL-------QQDEDLRHAIAEAEREGALEEAARLQYDQLH 539 Query: 394 LPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLG 453 + + ++ + A A+ + ++ V DI +VAR IP + + +R L L Sbjct: 540 TVQQRREALEASQAEAQSAGTALLREQVEAGDIADLVARWTGIPVQRLLAGERRKLLALE 599 Query: 454 DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 L V GQ +A+ A+ AI+ ARAG+ +PVGSFLF GPTGVGKTE+ L+ +L Sbjct: 600 SHLSERVIGQVEAVAAVAAAIRRARAGMKDPRRPVGSFLFLGPTGVGKTELAKALATSLF 659 Query: 514 IE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH 570 E L+R DMSE+MER+ +RLIGAPPGYVG+++GG LT+AV + P+AVLLLDE+EKAH Sbjct: 660 DEEEALVRLDMSEFMERNASARLIGAPPGYVGYEEGGQLTEAVRRRPYAVLLLDEVEKAH 719 Query: 571 PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH-QDNSTDAM 629 PDVFN+LLQV+D+G LTD+ G DFR+ V+VMT+N + L H + S+D Sbjct: 720 PDVFNLLLQVLDDGRLTDSQGLTVDFRHTVVVMTSNLA------SPVILEHARSGSSDDA 773 Query: 630 EEIKKI-------FTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV 682 + +++ F PEF NR+D +I F L + ++V + +L + ++G+SLEV Sbjct: 774 QLQQQVDAALSSQFRPEFLNRIDEVIRFRPLKVKDLVRIVRLQLADLSTLMAEQGLSLEV 833 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 + LA +G++ GARP+ RV++ L+ PLA +LL Sbjct: 834 DDAVADSLARQGHEPEYGARPLRRVLRRQLENPLATQLL 872 >UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q21KI1_SACD2 Length = 897 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 125/281 (44%), Positives = 179/281 (63%), Gaps = 6/281 (2%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ FTTNL Q A+ G ID ++GR+ E+ + I VLCRR++NNP+L GE+GVGKTA+ EGLA Sbjct: 184 LDQFTTNLTQQAKDGKIDSILGRDDEIRQIIDVLCRRKQNNPILTGEAGVGKTAVVEGLA 243 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEI 287 +I QGDVP + + I SLD+G L AG +G+FE R K ++K+++Q S ILFIDE Sbjct: 244 VKIAQGDVPTAIENVEIRSLDLGLLQAGAGVKGEFENRLKNVIKEVQQSVQSIILFIDEA 303 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT+IGAG +G DAANL+KP L+ G++R I +TT+ E+ FE D AL RRFQ + + Sbjct: 304 HTLIGAGNQAGSG-DAANLLKPALARGELRTIAATTWAEYKKYFESDAALTRRFQVVKVE 362 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS+++ + ++ P E HH V AV A+V L+ +YI R LPDK + ++D A A Sbjct: 363 EPSVDKAIIMLRNAAPTLEQHHKVVILDAAVSASVNLSHRYIPGRQLPDKCVSLLDTACA 422 Query: 408 RARL----MPVSKRKKTVNVADIESVVARIARIPEKSVSQS 444 R L P + + + +IE + R+ + EK S Sbjct: 423 RVNLSQNTTPARIVQYSQEIKNIEFEIERLNQEAEKGYEHS 463 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 118/391 (30%), Positives = 203/391 (51%), Gaps = 18/391 (4%) Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDE--AGARARLMPVSKRKKTVNVADIESVVARIAR 435 + +A E A + + D + A D+ + A R +L +S + + E VVA + Sbjct: 497 INSAREKAEEKVQDSDNEESATDLTNTLIAELRVKLKSISGSQPLIYECVDEQVVAEVVA 556 Query: 436 ----IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 IP + + + +L ++ V GQ ++ +++A++ ARA L +P+G F Sbjct: 557 DWTGIPVGRMQSDEIQNVLSLEQTMEKRVIGQSHGLKLISKAVQTARAKLSDPKRPLGVF 616 Query: 492 LFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 + GP+GVGKTE + L++ L G E + +MSE+ E H VS L+G+PPGYVG+ +GG+ Sbjct: 617 MLVGPSGVGKTETALTLAEQLYGSEQNMTVINMSEFKEEHKVSMLMGSPPGYVGYGEGGV 676 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT+AV + P++V+LLDE+EKAHP V +I QV D G L D GR DF+N V++MT+N Sbjct: 677 LTEAVRRKPYSVVLLDEMEKAHPGVQDIFYQVFDKGILRDGEGRDIDFKNTVIIMTSNTA 736 Query: 609 VRETERKSIGLIHQDNSTDAMEEI----KKIFTPEFRNRLDNIIWFDHLSTDVIHQ--VV 662 + E+ I + +E I ++ + P F R+ N+I + L + + V+ Sbjct: 737 SAQIEQLCIDPETKPEPKALLEAIEGTLRETYKPAFLGRI-NLIPYYPLDEQCLSEIAVM 795 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 ++ +V+ + K V L S + + GAR ++ ++ + L LA ++L Sbjct: 796 QLHAIQQRVETNYK-VELNYSDKLVEHVVSLCAQSDTGARKISALLNNTLLPVLAEKILT 854 Query: 723 GSLVDGGQVTVALD-KEKNELTYGFQSAQKH 752 +D +V +D E+ E S +++ Sbjct: 855 EIALDKALESVEVDVSEEGEFVVKINSKKEN 885 >UniRef50_A8JF08 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JF08_CHLRE Length = 692 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 122/244 (50%), Positives = 164/244 (67%), Gaps = 5/244 (2%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + + +L LAR +DPLIGR EL + VLCRR KNNP+++GESGVGKTA+ EGLA Sbjct: 10 LSRYGRDLTALARARQLDPLIGRTDELRKLFNVLCRRTKNNPVVLGESGVGKTALVEGLA 69 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RI GD P + I +LD+G L+AG + G+FE+R A+LK+L + ILFID+IH Sbjct: 70 QRIAAGDCPPALKGAAIIALDLGMLMAGATFPGEFEQRMSAVLKEL----SCILFIDDIH 125 Query: 289 TIIGAGAASGGQV-DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 + G A GG V DA+ L+KPLL+ G++R IG+TT +F EKD AL RRFQ++ I Sbjct: 126 NVTGPNAQQGGGVNDASMLLKPLLARGELRCIGATTPDKFRRFIEKDPALERRFQQLHIA 185 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 +P+ E + I+ GL +YE H +R T A+ AAVEL+ +Y DR LPDKAID++DEA A Sbjct: 186 QPTPPEAMSILRGLGARYEKHPALRITDAALVAAVELSHRYTADRFLPDKAIDLVDEAAA 245 Query: 408 RARL 411 R +L Sbjct: 246 RVKL 249 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 117/289 (40%), Positives = 166/289 (57%), Gaps = 27/289 (9%) Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL--- 516 + GQ++A+ A+ +AI +RAGL + P+ SFLF GPTGVGKTE L+KAL +L Sbjct: 401 IIGQEEAVSAVADAIHRSRAGLKDPNGPIASFLFLGPTGVGKTE----LAKALAAQLFNA 456 Query: 517 ----LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI---EKA 569 +R DMSEYME+H VS+LIGAPPGYVGFD+GG LT+AV + P+ V+L DE+ + Sbjct: 457 EDAMVRLDMSEYMEKHAVSKLIGAPPGYVGFDEGGQLTEAVRRRPYTVVLFDELIINPPS 516 Query: 570 H--PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG--------- 618 H P + + T + GR F++ +++MT+N G E + + G Sbjct: 517 HIRPSPYALNPSPTHPPTSPSHQGRTVSFKHTIIIMTSNLGSSEIYKATAGRARTQLAAT 576 Query: 619 -LIHQDNSTD-AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK 676 L N D M+++++ F PEF NR+D I F+ L+ I VV + L +L +K Sbjct: 577 PLAADSNIRDLVMDQVRRHFPPEFLNRVDEFIIFEPLTAVQIRSVVALRLRGLVSRLAEK 636 Query: 677 GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSL 725 V L ++ A + LA KG+D GARP+ R IQ L+ PLA LL G Sbjct: 637 KVRLVLADSAMDHLAAKGFDPIFGARPVKRAIQRELETPLAQALLRGDF 685 >UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding subunit n=15 Tax=Gammaproteobacteria RepID=A7JYI1_VIBSE Length = 892 Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 131/290 (45%), Positives = 187/290 (64%), Gaps = 13/290 (4%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + FTT+ AR G IDP+ R++E+ + + +L RRRKNNP+ VGE GVGKTA+ EGLA Sbjct: 176 LSKFTTDFTGKARKGEIDPVFCRDQEIRQIVDILARRRKNNPIAVGEPGVGKTAVVEGLA 235 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEI 287 +IVQGDVP+ + +Y LD+G L AG +G+FEKR A+L +++ T ILFIDE Sbjct: 236 LKIVQGDVPDNLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEA 295 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT++G G +GG DAANL+KP L+ G+++ I +TT+ E+ FEKD ALARRFQ + + Sbjct: 296 HTLVGGGNQAGGS-DAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLD 354 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS E+ II GL+P YE H+V A+ AA L+ +YI+ R LPDKAIDV+D A A Sbjct: 355 EPSPEQAALIIRGLRPAYEKSHNVYVRDDAITAAAALSARYISGRQLPDKAIDVLDTACA 414 Query: 408 RARLMPVSKRKKTVNV--ADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 R + ++N A +E++ +A ++ + +RD L+ GD+ Sbjct: 415 RVNI--------SLNAIPASVETLQQELA-AQQRELEALERDALQQTGDK 455 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 125/336 (37%), Positives = 186/336 (55%), Gaps = 22/336 (6%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 ++ V++ IP + Q + +T L + L + GQ+ AI+AL+E I+ A+AGLG+ Sbjct: 564 EVSHVISDWTGIPMGKMLQDEAETTLKLKESLTQSIKGQEYAIDALSEGIQTAKAGLGNP 623 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLS-KALGIE--LLRFDMSEYMERHTVSRLIGAPPGYV 541 P G FL GP+GVGKTE ++ + G E + +MSE+ E+HTVSRLIG+PPGYV Sbjct: 624 DAPTGVFLLVGPSGVGKTETARSIADQMFGGERFMTTINMSEFQEKHTVSRLIGSPPGYV 683 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+ +GG+LT+AV + P++V+LLDE+EKA P+V N+ QV D GTL D GR DF+N ++ Sbjct: 684 GYGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQVFDKGTLNDGEGRTIDFKNTLI 743 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDA---MEEIKKIFTPEFRNRL---DNIIWFDHLS- 654 +MT+N E E L+HQ DA E I+ F+ L +++ F LS Sbjct: 744 IMTSNLATHEIE----SLVHQSKDIDANIIAEAIRPTLNQHFKPALLARMSVLPFVPLSD 799 Query: 655 ---TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 T++IH ++K LQ +SL + ++ GAR + VI Sbjct: 800 EAMTEIIHHKLNKVSQRLQ---SHHKLSLSYEESLVEFVLGNCRLAETGARNIDAVINRQ 856 Query: 712 LKKPLANELLFGSLVDG-GQVTVALDKEKNELTYGF 746 L L+ +LL D Q+ V++D E+ LTY F Sbjct: 857 LLPQLSTQLLVHDKDDSHTQIEVSVD-EQGTLTYAF 891 >UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=Proteobacteria RepID=C4I651_BURPS Length = 979 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 125/265 (47%), Positives = 165/265 (62%), Gaps = 2/265 (0%) Query: 148 TQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRK 207 + + PG + A +E + T+L AR G IDP+IGRE E+ VL RRR+ Sbjct: 170 SAPASPGEPSGATRAAPNGSPLERYCTDLTARARDGDIDPVIGRELEIRTMTDVLLRRRQ 229 Query: 208 NNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRF 267 NNPLL GE+GVGKTA+ EGLA I GDVP +AD + S+D+G+LLAG +G+FE R Sbjct: 230 NNPLLTGEAGVGKTAVVEGLALAIANGDVPPKLADVRLMSVDVGALLAGAGMKGEFESRL 289 Query: 268 KALLKQLEQDTNS-ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 K +L+ + ILF+DEIHT+IGAG G DAANL+KP L+ G IR IG+TT+ E Sbjct: 290 KGVLEAAAKSVAPVILFVDEIHTLIGAG-GQAGTGDAANLLKPALARGTIRTIGATTWAE 348 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + EKD AL RRFQ + + EP V ++ G+ + HH V +A+RAAV L+ Sbjct: 349 YKRHIEKDPALTRRFQVLQVPEPEEPAAVHMVRGVARAFARHHRVTVRDEAIRAAVALSH 408 Query: 387 KYINDRHLPDKAIDVIDEAGARARL 411 +YI RHLPDKAI ++D A AR L Sbjct: 409 RYIPSRHLPDKAISLLDTACARVAL 433 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 100/252 (39%), Positives = 146/252 (57%), Gaps = 14/252 (5%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ A + +VA IP + + ++ L L+ V GQ A+ + E ++ ARAG Sbjct: 622 VDEAIVAQIVADWTGIPVGRMMTDEVAAVRALPATLEARVIGQPDALRQIGERVQTARAG 681 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAP 537 L KP+G FL AGP+GVGKTE + L++AL G E L+ +MSEY E HTVS L GAP Sbjct: 682 LADPKKPLGVFLLAGPSGVGKTETALALAEALYGGEQSLITINMSEYQEAHTVSGLKGAP 741 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ +GG+LT+AV + P++V+LLDEIEKAH DV + QV D G + D +GR DFR Sbjct: 742 PGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHRDVHELFFQVFDKGYMEDGDGRYIDFR 801 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDA-------MEEIKKIFTPEFRNRLDNIIWF 650 N +++T+N G E + + DA M E+ K+F F R+ +++ + Sbjct: 802 NTTILLTSNVG---AELSASLCADASLAPDAAALRDALMPELLKVFPAAFLGRV-SVVPY 857 Query: 651 DHLSTDVIHQVV 662 L + ++V Sbjct: 858 RPLEARALARIV 869 >UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B6EJJ8_ALISL Length = 872 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 149/420 (35%), Positives = 233/420 (55%), Gaps = 27/420 (6%) Query: 6 LELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELEAFIE 63 ++ SL A + H + EH + LL P+ ++A+E + E+ +E Sbjct: 17 MKASLEAAAGECVQRGHFSIEFEHWFVQLLQQPTVGWQKAVEQTGM-------ASESILE 69 Query: 64 QTTPVLPASEEERDTQPTLSFQRV-LQRAVFHVQSSGRNEVTGANVLVAIFSEQE-SQAA 121 Q L + D+ P+LS Q V L + + + S +++ V I +Q Q A Sbjct: 70 QLNNHLSSLPRGNDSAPSLSPQLVELLKDAWMIGSLNHAQLSMNEFHVLIVLKQRIEQGA 129 Query: 122 Y---------LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENF 172 Y L ++R + S + G + N A ++ + Sbjct: 130 YNGALSTWIKSLSSEWLNRQSITKTASSHLSSTSMLCGKNQGMEGNMSTPA-----LDKY 184 Query: 173 TTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 + NL Q AR G +DP+ GR E+ +AI +LCRRR+N+P+LVG+ GVGKTAI EGLA +IV Sbjct: 185 SQNLTQAARNGDLDPISGRGNEIRKAIDILCRRRQNSPILVGDPGVGKTAIVEGLAQQIV 244 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTII 291 G+VP + + + +LD+ L AG +G+FE R K ++ +++Q T I+FIDE HT+I Sbjct: 245 DGNVPPALKNVELRNLDLSLLQAGASIKGEFENRLKDVINEIKQSATPIIVFIDEAHTLI 304 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 GAG A+ GQ DAAN++KP L+ G+ R I +TT+ E+ FE D AL+RRFQ + I EPS Sbjct: 305 GAGGAA-GQNDAANILKPALARGEFRSIAATTWAEYKQYFESDAALSRRFQVVSIGEPSE 363 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 + + +++G+K E HH+V+ +A+ AAV L+++Y+ +R LPDKAI ++D A +R L Sbjct: 364 GDAIHMLSGVKTCLEKHHNVKVMQEAINAAVSLSIRYLPERKLPDKAISLLDTACSRIGL 423 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 104/312 (33%), Positives = 172/312 (55%), Gaps = 17/312 (5%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 VN I V++ IP ++ + + + L +L + V GQ I +++AI+M+RAG Sbjct: 541 VNEQTIAEVISLWTGIPVGNMLKEEVEHLMHLEKHIGERVIGQIAPIAEISKAIRMSRAG 600 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAP 537 L KPVG FL GP+GVGKTE + L+ L + +M+E+ E H VS L+G+P Sbjct: 601 LTDLRKPVGVFLMCGPSGVGKTETALALTDLLYGGKRNITTINMTEFKEEHKVSTLLGSP 660 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 GYVG+ +GG+LT+AV K+P++VLLLDE+EKAHP V +I Q+ D G+++D+ GR+ DFR Sbjct: 661 AGYVGYGKGGVLTEAVRKNPYSVLLLDEMEKAHPGVHDIFYQIFDKGSISDSEGREVDFR 720 Query: 598 NVVLVMTTNA-------GVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 N +++MT+NA G + R SI ++ + E++ F P F R + +F Sbjct: 721 NTIIIMTSNAADSAVVNGCADG-RPSISIL----TKAIFPELQNFFKPAFLGRTTIVPYF 775 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 L+ + + ++ + ++ ++ Q + + + L GAR + ++I Sbjct: 776 P-LNDEEMSKIAQLSLRRIEKRIKQHYNATFDYDTQVIELLVSMNQSPETGARAIEQLIN 834 Query: 710 DNLKKPLANELL 721 L LAN+ + Sbjct: 835 RQLMPELANQCI 846 >UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TDQ5_9BURK Length = 910 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 162/444 (36%), Positives = 233/444 (52%), Gaps = 45/444 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 LN E +L++ A H + VEHLLL LL + P + L +V L +L+ Sbjct: 12 LNPECKLAMEQAAQLCVRQTHYNVDVEHLLLTLLESDAPDLKAILAHFAVKPETLSAQLQ 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLS--FQRVLQRA-VFHVQSSGRNEVTGANVLVAIFSEQ 116 ++ + P LS F + Q A + G ++ +++A+ Sbjct: 72 KTVD-------GFKRGNGRTPALSPNFSPLFQEAWLLSSMLLGEQQIRSGTLVLALLEVD 124 Query: 117 E------SQAAYLLRKHEVSRLDVVNFISHGTRKDE-----PTQSSDP------------ 153 A LL + D + I G+ +D P Q S+ Sbjct: 125 TLRGMLLESAPALLNFPRAALRDRLAAILAGSSEDAGGSHMPGQDSEAAQPGAASASASS 184 Query: 154 -----GSQPNSEEQAGGEER---MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRR 205 G+ PN AGG R +E +T ++ LAR G IDP+ GR+ E+ + I VL RR Sbjct: 185 AARETGAMPNIAGGAGGSGRKSALELYTVDMTGLAREGKIDPIRGRDAEIRQLIDVLLRR 244 Query: 206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK 265 R+NNP+L GE+GVGKTA+ EG A RIVQGDVP + + ++ SLD+ L AG +G+FE Sbjct: 245 RQNNPILTGEAGVGKTAVVEGFAQRIVQGDVPPALVNVSVRSLDLALLQAGAGVKGEFEN 304 Query: 266 RFKALLKQLEQD-TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTY 324 R K+++ +++ ILFIDE H +IGAG S GQ DAANL+KP L+ G++R I +TT+ Sbjct: 305 RLKSVIAEVKASPVPVILFIDEAHQLIGAG-GSEGQGDAANLLKPALARGELRTIAATTW 363 Query: 325 QEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVEL 384 E+ E+D ALARRFQ + + EPS + ++ G+ K E HH V AVR AV+L Sbjct: 364 AEYKKYVERDPALARRFQVVKVEEPSEAVAIDMLRGMVQKLEEHHGVEILDDAVRDAVKL 423 Query: 385 AVKYINDRHLPDKAIDVIDEAGAR 408 + +YI+ R LPDKAI V+D A AR Sbjct: 424 SHRYISGRQLPDKAISVLDTACAR 447 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 106/322 (32%), Positives = 176/322 (54%), Gaps = 21/322 (6%) Query: 411 LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 ++PV +TV V++ IP + + T+ L D+L V GQD+A++A+ Sbjct: 567 MVPVCVDSETV-----AQVISGWTGIPVGRMLADELHTVLYLQDKLAERVVGQDEALDAI 621 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMER 527 ++ RA L KPVG FL GP+GVGKTE L+ L G E ++ +MSE+ E Sbjct: 622 ARRVRTFRADLDDPGKPVGVFLLVGPSGVGKTETACALADMLYGGERNMITVNMSEFQEA 681 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 H+VS L GAPPGYVG+ +GG+LT+AV + P++V+LLDE+EKAHPDV + QV D G + Sbjct: 682 HSVSGLKGAPPGYVGYGRGGVLTEAVRRRPYSVVLLDEMEKAHPDVLELFFQVFDKGVME 741 Query: 588 DNNGRKADFRNVVLVMTTNAG---VRETERKSIGLIHQDNSTDAMEEIK----KIFTPEF 640 D G DF+N ++++T+NA + E R + + +E+++ + F+P F Sbjct: 742 DGEGVPIDFKNTLILLTSNAAQDVITEASRGG----RRPPPDELIEKLRPALLRQFSPAF 797 Query: 641 RNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAM 699 RL + ++ HL I+ +V+ + L + ++ L + +A++ + Sbjct: 798 LGRLVLVPYY-HLGDAQINAIVNLKLERLAQRFERNHHAGLTWDDDVATLIAQRCKEVDS 856 Query: 700 GARPMARVIQDNLKKPLANELL 721 GAR + ++ ++ LA ++L Sbjct: 857 GARNVDHILTQSVLPELARQVL 878 >UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L5D3_9GAMM Length = 917 Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 162/445 (36%), Positives = 239/445 (53%), Gaps = 62/445 (13%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIE 63 Q E + N+ AR + +EHL LALL P + D V I Sbjct: 18 QAAERAANLCMARGNYE----VDLEHLFLALLEQPQS---------DFV--------LIA 56 Query: 64 QTTPVLPASEEERDTQPTLS-----------FQRVLQRAVFHVQ-----SSGRNEVTGAN 107 + + +LP S E RD +S F + + + H S + + Sbjct: 57 RRSGILPESLE-RDLNDEISQFKTGNSRTPVFSQHIPKLFEHAWLIASLDSETTRIRSGH 115 Query: 108 VLVAIFSEQE-SQAAY-----LLR------KHEVSRL-----DVVNFISHGTRKDEPTQS 150 +L+A+ +E + +Q AY +R KH+ ++L + V + Sbjct: 116 LLLALLTEPDLAQLAYRGSKLFVRFKRDELKHDFAKLTEGSQEAVQTVRFADASAAGEAG 175 Query: 151 SDPGSQPNSEEQAGGEER---MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRK 207 D G+ P E GG + ++ FTTNL Q AR G IDP+IGR+ E+ + I +L RRR+ Sbjct: 176 EDEGAVPG--EAKGGLSKTPALDQFTTNLTQRARDGKIDPVIGRDGEIRQVIDILMRRRQ 233 Query: 208 NNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRF 267 NNP+L GE+GVGKTA+ EGLA RI DVP+V+ +++LD+G L AG +G+FE R Sbjct: 234 NNPILTGEAGVGKTAVVEGLARRIADKDVPDVLQGVELHTLDMGLLQAGASVKGEFENRL 293 Query: 268 KALLKQLEQDTNSI-LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 K ++ ++++ + I LFIDE HT+IGAG + GQ DAANL+KP L+ G++R I +TT+ E Sbjct: 294 KNVIDEVKKSPHPIILFIDEAHTMIGAGG-TAGQNDAANLLKPALARGELRTIAATTWGE 352 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + FEKD ALARRFQ + + EPS ++ G+ EAH ++R +AV AV L+ Sbjct: 353 YKKYFEKDAALARRFQVVKVEEPSEALAAAMLRGMVGLMEAHFNIRVLDEAVTEAVRLSH 412 Query: 387 KYINDRHLPDKAIDVIDEAGARARL 411 +YI+ R LPDKA+ V+D A A+ L Sbjct: 413 RYISGRQLPDKAVSVLDTACAKVAL 437 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/246 (37%), Positives = 152/246 (61%), Gaps = 10/246 (4%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + +V+ +P + + + T++ LG+ L V GQD A++A+ + ++ A A L + Sbjct: 586 VAEIVSAWTGVPLGRMVKDEIRTVRTLGNLLVERVIGQDHALDAIAQRVRTATAKLEDPN 645 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVG 542 KP G F+F GP+GVGKTE + L+ L G E L+ +MSEY E H+VS L G+PPGYVG Sbjct: 646 KPRGVFMFVGPSGVGKTETALALADILYGGERKLVTINMSEYQEAHSVSGLKGSPPGYVG 705 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + +GG+LT+AV ++P++V+LLDE+EKAHPDV + QV D G + D GR+ DFRN +++ Sbjct: 706 YGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGMMDDAEGREIDFRNTLII 765 Query: 603 MTTNAGVRETERKSIG-----LIHQDNSTDAMEEI-KKIFTPEFRNRLDNIIWFDHLSTD 656 +T+N G + + + + + +DA+ + + F P F RL + ++ ++ D Sbjct: 766 LTSNIGSSQIMQACLNKPAEEIPGAEALSDALRPVLMRTFKPAFLGRLKVVPYYP-INDD 824 Query: 657 VIHQVV 662 V+ Q++ Sbjct: 825 VLAQII 830 >UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989 RepID=B7LFQ0_ECO55 Length = 849 Score = 241 bits (615), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 120/267 (44%), Positives = 179/267 (67%), Gaps = 5/267 (1%) Query: 167 ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 E + +T NL+ A G +DP+ GREKE+ + I +L RRR+NNP+L GE GVGK++I EG Sbjct: 169 EYLSKYTENLSLRAETGKLDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEG 228 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFID 285 LA +I G VP+V+ + I++LD+G+LLAG RG+FE R K+LL +L D +ILFID Sbjct: 229 LALQIASGRVPDVLKNVRIHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFID 288 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 E H++IGAG GQ DAANL+KP L+ G++R+I +TT+ E+ FEKD ALARRFQ + Sbjct: 289 EAHSLIGAGGLP-GQTDAANLLKPALARGELRIIAATTWGEYKKYFEKDGALARRFQIVK 347 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 + EP+ + T +++ L P E HH+V +A+ A V L+ +Y++ R PDK++ ++D A Sbjct: 348 VAEPNQDVTAEMLRSLLPMMEKHHNVSIREEAITATVHLSDRYLHGRRQPDKSVSLLDTA 407 Query: 406 GARARLMPVSKRKKTVNVADIESVVAR 432 +R + VS+ + D+E+ + R Sbjct: 408 CSR---VAVSQSTSPDAIQDVEASLVR 431 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/279 (35%), Positives = 143/279 (51%), Gaps = 21/279 (7%) Query: 456 LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK-ALGI 514 L+ V GQ A+ A+ + + RA L KP G FL AGP+G GKTE L++ G Sbjct: 546 LEQRVLGQRYAMSAIASQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALAEFVYGD 605 Query: 515 E--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 E L+ +M+E+ E HTVS L GAPPGYVGF QGG LT+ V +P++V+LLDEIEKAHPD Sbjct: 606 ENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGGTLTERVSHNPYSVILLDEIEKAHPD 665 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEI 632 V Q+ D+G + D G+ FR+ +++MT+N ++I I D T+ + I Sbjct: 666 VLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMTSNFA-----SENITNIWNDGETN-RDRI 719 Query: 633 KKIFTPEFRNRL-------DNIIWFDHLSTDVIHQVV----DKFIVELQVQLDQKGVSLE 681 K++ P F N+I F L + + +V DK + Q + +E Sbjct: 720 KEMLLPLFNEHFGAAFMGRTNLIPFTPLHSKTLRDIVLIKIDKICQRFE-QASGQMYKIE 778 Query: 682 VSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 + +W+ GAR + V+ + LA L Sbjct: 779 YNDSLIDWITHHCQCDKSGARDIDSVLNSTVLPVLARYL 817 >UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria RepID=A7ZQR5_ECO24 Length = 881 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 118/266 (44%), Positives = 173/266 (65%), Gaps = 8/266 (3%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + FT ++ + AR G IDP+ GR+ E+ + + +L RRRKNNP+LVGE GVGKTA+ EGLA Sbjct: 198 LNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPILVGEPGVGKTALVEGLA 257 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEI 287 RI +G+VP+ + I +LD+G L AG +G+FE+R K ++ +++ + LFIDE Sbjct: 258 LRIAEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSPEPVLLFIDEA 317 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HTIIGAG +GG DAANL+KP L+ G++R I +TT+ E+ FE+D AL RRFQ + + Sbjct: 318 HTIIGAGNQAGG-ADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVD 376 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EP + ++ GLK +Y HH V A++ AV L+ +Y+ R LPDKA+D++D AGA Sbjct: 377 EPDDDTACLMLRGLKARYAQHHGVHMLDSAIQTAVRLSRRYLTGRQLPDKAVDLLDTAGA 436 Query: 408 RARLM------PVSKRKKTVNVADIE 427 R R+ P+++ + DIE Sbjct: 437 RVRMSLDTLPEPLTQLHARLAALDIE 462 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 110/311 (35%), Positives = 175/311 (56%), Gaps = 14/311 (4%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ + +VVA IP S+ + ++ L ++ L+ V GQ A+ A+ + ++ A+ G Sbjct: 543 VDARAVATVVADWTGIPLSSLLRDEQSDLLSMEQSLENRVVGQSPALCAIAQRLRAAKTG 602 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAP 537 L E+ P G FL GP+G GKTE + L+ L G E L+ ++SEY E HTVS+L GAP Sbjct: 603 LTPENGPQGVFLLTGPSGTGKTETALTLADTLFGGEKSLITINLSEYQEPHTVSQLKGAP 662 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ QGG+LT+AV K P++V+LLDE+EKAH DV N+ QV D G + D GR+ DFR Sbjct: 663 PGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREIDFR 722 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDA-MEE-----IKKIFTPEFRNRLDNIIWFD 651 N V++MT N G ++ L + ++TDA + E +++ F P R +I + Sbjct: 723 NTVILMTANLG---SDHIMQLLEEKPDATDADLHELLYPLLREHFQPALMARFQTVI-YR 778 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L + + +V+ + ++ +L Q G+ E++ + L GAR + ++ Sbjct: 779 PLGQEAMRAIVEMKLAQVVRRLRQHYGLETEINDSLYDALTAACLLPDTGARNIDSLLNQ 838 Query: 711 NLKKPLANELL 721 + L+ +LL Sbjct: 839 QILPVLSQQLL 849 >UniRef50_Q6KHS7 ATP-dependent Clp protease, ATPase subunit n=3 Tax=Mycoplasma RepID=Q6KHS7_MYCMO Length = 711 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/325 (36%), Positives = 202/325 (62%), Gaps = 10/325 (3%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K+ V +I +V++ IP + + +D L NL LK V GQ++AIE +++ I + Sbjct: 383 KEDVTENEIAEIVSKWTMIPISKLLEKQKDKLLNLQSELKKQVKGQEEAIELVSDTILRS 442 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLI 534 RA + +KP+GSF+F GPTGVGKTE+ L+ L +L+R DMSEY E+H++S++I Sbjct: 443 RANINDPNKPIGSFIFMGPTGVGKTELAKSLAYVLFDSKKQLIRLDMSEYSEKHSISKII 502 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 G+PPGY+G++ GG LT+ + + P++++L DE+EKAHPDV N+LLQ++D+G LTD G+ Sbjct: 503 GSPPGYIGYENGGQLTELIRQKPYSIVLFDELEKAHPDVLNVLLQILDDGILTDAKGKTI 562 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 +F+N +++MTTN G + L + + + + K PEF NR+D II F L Sbjct: 563 NFKNTIIIMTTNLG------SDLILEKVYDPKELRKILLKFVKPEFLNRIDEIIPFKELD 616 Query: 655 TDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 D I ++++ + EL+ ++ Q + + ++ +++++GYD GARP+ RVIQ+ ++ Sbjct: 617 KDTIKEIIENELNELEKRVYQNQTIFIKFDDSIVEYISKQGYDNLYGARPLKRVIQNKIQ 676 Query: 714 KPLANELLFGSLVDGGQVTVALDKE 738 +A ++ G+L + ++ E Sbjct: 677 SKIALNIISGNLKPNESYIILIENE 701 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 111/244 (45%), Positives = 171/244 (70%), Gaps = 2/244 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ F NL LA+ ++P+IGRE E+ R I++L R+ KNNP+LVGE GVGKTAI EGLA Sbjct: 14 LKQFGRNLTDLAKKNMLEPVIGREDEIRRIIRILSRKTKNNPVLVGEPGVGKTAIVEGLA 73 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEI 287 +I VPE + + + + + SL+AG Y+G FE+R K+L+ ++E++ I+FIDEI Sbjct: 74 KKIHDAQVPEDLKNKEVIEISLPSLIAGASYQGQFEERIKSLMDKIEKNQGKYIIFIDEI 133 Query: 288 HTIIGAGA-ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 H +IG G +S +DAAN+ KP L+ G+++++G+TT +E+ E D AL RR QK+ + Sbjct: 134 HLLIGTGKNSSNSTMDAANIFKPALARGQMQLVGATTIEEYRKYIESDSALERRMQKVKV 193 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EP+IE+T+ I+ G+K ++E H+V+ + KA+ AA L+ +YI+DR LPDKAID++DEA Sbjct: 194 AEPNIEDTITILRGIKGRFETFHNVKISDKALIAAANLSARYISDRFLPDKAIDLVDEAA 253 Query: 407 ARAR 410 + + Sbjct: 254 STIK 257 >UniRef50_B5FRR8 Chaperone protein clpB n=19 Tax=Gammaproteobacteria RepID=B5FRR8_SALDC Length = 911 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 116/245 (47%), Positives = 168/245 (68%), Gaps = 2/245 (0%) Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 G+ + + N+ AR G +DP++ R+ E++ I +LCRRRKNNP++VGE+GVGK+A+ Sbjct: 176 GDTLLARYAKNMTDDARQGRLDPVLCRDNEIDLMIDILCRRRKNNPVVVGEAGVGKSALI 235 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILF 283 EGLA RI+ G VP+ + D I +LD+G+L AG +G+FEKRFK L+ ++ Q ILF Sbjct: 236 EGLALRIIAGQVPDKLRDTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIQSPKPVILF 295 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDE HT+IGAG GG +D +NL+KP L+ G+++ I +TT+ E+ FEKD AL+RRFQ Sbjct: 296 IDEAHTLIGAGNQQGG-LDISNLLKPALARGELKTIAATTWSEYKKYFEKDSALSRRFQL 354 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + ++EP+ E I+ GL YE H V +A++AA L+ +Y++ R LPDKAIDV+D Sbjct: 355 VKVSEPNAAEATIILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSGRQLPDKAIDVLD 414 Query: 404 EAGAR 408 A AR Sbjct: 415 TACAR 419 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 95/238 (39%), Positives = 144/238 (60%), Gaps = 15/238 (6%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ I SV+ +P +SQ++ + +L L + GQ AI+ L + + ARA Sbjct: 565 VDKKQIASVITEWTGVPLNRLSQNEMSVITDLPQWLGDTIKGQALAIKHLHKHLLTARAD 624 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL--GIELLR-FDMSEYMERHTVSRLIGAP 537 L +P+G+FL AGP+GVGKTE +QL++ L G + L +MSE+ E+HTVSRLIG+P Sbjct: 625 LRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSP 684 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ +GG+LT+A+ + P++V+LLDE+EKAHPDV N+ Q D G + D GR D + Sbjct: 685 PGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGEMADGEGRLIDCK 744 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE-----IKKIFTPEFRNRLDNIIWF 650 NVV +T+N G + + + H DN +AM+E + F P R++ + + Sbjct: 745 NVVFFLTSNLGYQ------VIVEHADNP-EAMQEALYPVLADFFKPALLARMEVVPYL 795 >UniRef50_Q25823 Clp (C?) protein n=14 Tax=Haemosporida RepID=Q25823_PLAF7 Length = 766 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 139/445 (31%), Positives = 242/445 (54%), Gaps = 34/445 (7%) Query: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD 370 L I +I T +E++ F+ + F KI I + SI +T II KY ++ Sbjct: 291 LYGYNIHIIIVTNKKEYNTYFKYNIIKDSYFYKIRIKDLSILQTFLIIKNNIYKYINYYK 350 Query: 371 VRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN-------- 422 + + + L+ KYI LP + +++ + + L+ N Sbjct: 351 ININNYIIYELINLSKKYIKPLILPTTPLILLENSCSNKYLLNNKISYSNFNYLFTYNNN 410 Query: 423 -----------VADIESVVARIARIPEKSVSQSDRDT---LKNLGDRLKMLVFGQDKAIE 468 + DI++ ++ I + + + ++ T L L + L ++GQ+ Sbjct: 411 IIYNNKNNNLTIEDIKNSISNYLNISKTILFKDNKLTKLNLTKLENYLYNHIYGQNHIFN 470 Query: 469 ALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYM 525 + IK GL +++KP+GS++ GP+G GKTE+ LSK L EL+RFDMSEYM Sbjct: 471 KIIPFIKQNFIGLKNKNKPIGSWILCGPSGTGKTELAKILSKQLFGSEKELIRFDMSEYM 530 Query: 526 ERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGT 585 E+H++SRLIG+PPGYVG+ +GG LT+ V K P++V+L DEIEKAHPD++NI+LQ++D G Sbjct: 531 EKHSISRLIGSPPGYVGYSEGGQLTEQVYKKPNSVILFDEIEKAHPDIYNIMLQILDEGR 590 Query: 586 LTDNNGRKADFRNVVLVMTTNAGV---RETERKSIGLIHQDNSTDAMEEIK----KIFTP 638 LTD+ G+ DF + ++++T+N G + K+ + + + + + IK F P Sbjct: 591 LTDSTGKLIDFTHTIILLTSNLGCPKNYDLYLKNKNFLSKSDLKEIEKNIKININNYFKP 650 Query: 639 EFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYD 696 E NRL NI+ F+ L+ + + + +KFI EL+++ L++ + + +++E + +L + Y+ Sbjct: 651 ELLNRLTNILIFNPLNINNLLFIFNKFINELKIKLYLNKLNIIIHINKELKYFLVKLMYN 710 Query: 697 RAMGARPMARVIQDNLKKPLANELL 721 GARP+ R+++ K +++ LL Sbjct: 711 PLYGARPLKRILELIFDKSISDLLL 735 >UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TPV1_CITRO Length = 835 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 177/474 (37%), Positives = 258/474 (54%), Gaps = 34/474 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREA--LEACSVDLVALRQELE 59 LN +L A R+R H F+ EHLLLALL + A L+ + + ALR E+ Sbjct: 10 LNPVCLYALEQAAGRSRAQGHWFVEPEHLLLALLDDEHCDLACCLDGAGIPVDALRDEIR 69 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRV--LQRAVFHVQSSGRNEVTGANVLVAIFSE-- 115 Q P S Q V L+ A+ +V A +L+ + + Sbjct: 70 RAQSQFRTGC-------TRMPVFSAQLVELLEGALLLTTFRQLKQVRSALLLLTLLTRDR 122 Query: 116 ---QESQAAYLLRKHEVSRLD--VVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERME 170 Q +Q LL K +L+ +N+ + SD + +++ G+ ++ Sbjct: 123 LRAQLAQGLPLLLKISAEQLEDHWLNWC-----RGSAEAVSD---RSDADAAVRGDSVLD 174 Query: 171 NFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWR 230 +T +L + AR G IDP+IGR+ E+ + I +L RRR+NNP+LVG GVGKTA+AEGLA R Sbjct: 175 QYTHDLTREARQGRIDPIIGRDAEIRQCIDILLRRRQNNPILVGAPGVGKTAVAEGLALR 234 Query: 231 IVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEIHT 289 I +G VP + D + SLD+G L AG +G+FE+R K +++ +++ + I LFIDE HT Sbjct: 235 IAEGSVPPPLRDVALLSLDLGLLQAGAGVKGEFEQRLKGVIEAVKKSSQPIVLFIDEAHT 294 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 +IGAG A GG DAANL+KP L+ G++R I +TT+QE+ FEKD AL RRFQ+I I EP Sbjct: 295 LIGAGGAEGGS-DAANLLKPALARGELRTIAATTWQEYKKYFEKDPALDRRFQRIHIEEP 353 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 + V ++ + K EAHH V+ A+R AV L+ +YI+ R LPDKAI V+D A +R Sbjct: 354 DEDSAVMMLRAVADKLEAHHGVQILDTAIREAVRLSQRYISGRQLPDKAISVLDTACSRV 413 Query: 410 RL----MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 L +P + + +A IE R+ R E V D L +L + K+L Sbjct: 414 ALAQHDIPPALEEVRQQLATIEEESVRLNR--ELLVGIDHHDRLCDLEAQAKLL 465 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 94/234 (40%), Positives = 131/234 (55%), Gaps = 4/234 (1%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 V+ A + +V+ IP + + L+ L +R+ V GQ A+E + ++ R+ Sbjct: 537 CVDAATVAAVIGGWTGIPIGQMLTDEAHALRTLVERMSERVMGQRAALETIARRLRAYRS 596 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGA 536 GL KPVG FL GPTGVGKTE L+ AL G E L+ ++SEY E HTVS+L GA Sbjct: 597 GLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLITINLSEYQEAHTVSQLKGA 656 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG+ GG LT+AV + P++V+LLDEIEKAHPDV V D G + D G DF Sbjct: 657 PPGYVGYGSGGALTEAVRRRPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGLIVDF 716 Query: 597 RNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-EEIKKIFTPEFRNRLDNIIW 649 +N V++ T+N G + + AM EE+ + F P F R+ + + Sbjct: 717 KNTVMLATSNVGAELILETPTSEFNSEWFNTAMREELLRHFRPAFLARMTTVAY 770 >UniRef50_B6EJ73 Chaperone ClpB n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EJ73_ALISL Length = 872 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 120/247 (48%), Positives = 173/247 (70%), Gaps = 2/247 (0%) Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 ++ + +TTN QLA+ IDP++ R+ E+ + I +L RRRKNNP++VGE+GVGKTA+ E Sbjct: 166 QDALSAYTTNYTQLAKDNKIDPVLCRDSEIRQMIDILARRRKNNPMIVGEAGVGKTALVE 225 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFI 284 GLA +I QG+VP+++ + ++ SLD+G L AG +G+FE+R ++K ++Q T ILFI Sbjct: 226 GLAIKIAQGEVPDILENVSLLSLDLGLLQAGASIKGEFERRLNLVIKAVQQSLTPIILFI 285 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DE HT+IGAG +G DAANL+KP L+ G++R IG+TT+ E+ EKD ALARRFQ I Sbjct: 286 DEAHTLIGAGGQAGSN-DAANLLKPALARGELRTIGATTWSEYKKYIEKDPALARRFQPI 344 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EP++ + + I+ GL KYE H V A+ AA EL+ +YI R LPDKAID++D Sbjct: 345 KVDEPTVSQAITILRGLADKYEESHGVYVRDDAIVAAAELSARYITGRQLPDKAIDLLDT 404 Query: 405 AGARARL 411 A AR ++ Sbjct: 405 ACARVKI 411 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 107/308 (34%), Positives = 174/308 (56%), Gaps = 15/308 (4%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + V++ IP ++ + + L +LK + GQD+AI AL +AI+ AGL + + Sbjct: 532 VAEVISHWTGIPMSTLLRGQASQVLTLHTQLKQQIKGQDQAIIALQKAIQATAAGLNNPN 591 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVG 542 P G FLF GP+GVGKT+ + ++ + G E L +MSE+ E+HTVSRLIG+PPGYVG Sbjct: 592 APTGVFLFVGPSGVGKTQTALAIADLMYGGEQFLTTINMSEFQEKHTVSRLIGSPPGYVG 651 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + +GG+LT+AV + P++V+LLDE+EKA +V N+ QV D G + D GR+ +F+ +++ Sbjct: 652 YGEGGVLTEAVRQRPYSVILLDEVEKADSEVMNLFYQVFDKGVVNDGEGREINFKQTLII 711 Query: 603 MTTNAGVRETERKSIGLIHQD------NSTDAMEEI-KKIFTPEFRNRLDNIIWFDHLST 655 MT+N E L +QD + T A+ I + F P R+ NI+ F L Sbjct: 712 MTSNLASEHIE----SLCNQDELPSVESLTKAIRPILNQYFKPALVARM-NIVPFYPLDL 766 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 + + +VD + +L QL ++ ++L + +A+ GAR + +I LK Sbjct: 767 ESMEALVDIRMQQLSQQLQKQRIALYYDAHIISHIAKSCTLTETGARNIDAIINGQLKPA 826 Query: 716 LANELLFG 723 ++++L Sbjct: 827 FSSQILLA 834 >UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=Bacteria RepID=B7H4I2_ACIB3 Length = 893 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 145/403 (35%), Positives = 221/403 (54%), Gaps = 27/403 (6%) Query: 27 VEHLLLALLSNPSAREA---LEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLS 83 +EHL L LL+ P + L+ + AL +L+ I Q LP R S Sbjct: 37 IEHLFLELLNQPLENDLKILLKKYKISADALADDLKETISQ----LPKGNT-RTPIFAKS 91 Query: 84 FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVV-------N 136 R+ ++A + + ++LVA+ + + Y + S D+ Sbjct: 92 IVRLFEQAWLLASAEQNPVIRSGHLLVALLTAPD---LYQIATRASSLFDLFPIDSMKHK 148 Query: 137 FISHGTRKDEPTQSSDPGSQPNSEEQAGGEER-------MENFTTNLNQLARVGGIDPLI 189 F+ + E + S SQ + EQA ++ +T NL + A+ GGIDP+I Sbjct: 149 FLEICEKSVEQQEESKTSSQADELEQAATPTAKTQKTPALDQYTINLTEKAKNGGIDPVI 208 Query: 190 GREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD 249 GRE E+ + +L RRR+NNP+L GE GVGKTA+ EGLA +I QG VPE + + ++ LD Sbjct: 209 GREYEIRLMLDILMRRRQNNPILTGEPGVGKTAVVEGLALKIAQGLVPEALKNVHLHVLD 268 Query: 250 IGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGGQVDAANLIK 308 +G L AG +G+FE R K ++++++ + ILFIDE HT+IGAG GQ DAANL+K Sbjct: 269 MGLLQAGASVKGEFENRLKQVIQEVQSSAHPIILFIDEAHTLIGAG-GQAGQNDAANLLK 327 Query: 309 PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH 368 P L+ G++R I +TT+ E+ FEKD AL+RRFQ + + EP+ E V ++ + P + H Sbjct: 328 PALARGELRTIAATTWAEYKQYFEKDAALSRRFQVVKVEEPTEEVAVDMLRAMIPVMQKH 387 Query: 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 +++ +A+ AV + +YI+ R LPDKA+ V+D A AR L Sbjct: 388 FNLQIDDEAIVTAVHASHRYISGRQLPDKAVSVLDTAAARVAL 430 Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 115/334 (34%), Positives = 181/334 (54%), Gaps = 11/334 (3%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 VN I +++ IP + + + L D+L V GQD A+ L + IK ++A Sbjct: 540 VNSQIINEIISDWTGIPVGKMVNDEIKQILTLEDKLGERVMGQDYALTQLVQGIKTSKAK 599 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAP 537 L +KP G FL GP+GVGKTE + L+ L G E L+ +MSEY E HTVS L GAP Sbjct: 600 LEDPNKPQGVFLLVGPSGVGKTETALALANELYGGEQHLITINMSEYQEAHTVSSLKGAP 659 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ QGG+LT+AV ++P++V+LLDEIEKAH DV + QV D GTL D GR DF+ Sbjct: 660 PGYVGYGQGGVLTEAVRRNPYSVVLLDEIEKAHSDVQELFYQVFDKGTLEDGEGRVIDFK 719 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNST--DAMEEIK----KIFTPEFRNRLDNIIWFD 651 N +++T+N G + + ++ T D +E +K K F P F R+ + +F Sbjct: 720 NTTILLTSNTGSSAIMQACLNQPVEEWPTAEDLIEHLKPSLYKQFKPAFLGRMRIVPYFP 779 Query: 652 HLSTDVIHQVVDKFIVELQVQLD-QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L D++ +++ + ++ +++ Q G ++ S + L + + GAR + ++ Sbjct: 780 -LHDDLLVRIIKHKLGKITARIEKQYGTEVQYSDDLVELLLSRCTEVDSGARNVDNILNS 838 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 + LA E+L + +D + +E+ Y Sbjct: 839 TVLPALATEILVALADQKLPKLIMIDAKDDEIQY 872 >UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria RepID=CLPB_YEREN Length = 890 Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 129/328 (39%), Positives = 194/328 (59%), Gaps = 15/328 (4%) Query: 103 VTGANVLVAIFSEQESQAAYLLRKHEVSRLDV------VNFISHGT-RKDEPTQSSDP-- 153 + ++L+A+ + E + A L E+ ++ + NFI+ + +E P Sbjct: 111 IRSGHLLLAMLTNMELRRALLAIAPEMEKIPLEHLSSDFNFITQASPETNEAATDGSPMY 170 Query: 154 -GSQPNSEEQA---GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNN 209 G+ P A + +TT+L LAR G IDP++GR E+ + +L RRR+NN Sbjct: 171 DGTLPGEASNAINGKSTATLAQYTTDLTALAREGKIDPVLGRNHEISTMVDILLRRRQNN 230 Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKA 269 PLL GE+GVGKTA+ EGLA IV G++P ++ ++ +LD+ +L AG +G+FE R K Sbjct: 231 PLLTGEAGVGKTAVVEGLALAIVAGEMPPALSQVSLLTLDVVALSAGASMKGEFEARLKN 290 Query: 270 LLKQ-LEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFS 328 +L + + T ILFIDE+HT++GAG + G DAANL+KP L+ G++R IG+TT+ EF Sbjct: 291 VLDEAMASPTPVILFIDEVHTLVGAG-GNAGTGDAANLLKPALARGQLRTIGATTWSEFK 349 Query: 329 NIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY 388 EKD AL RRFQ + + EP + + ++ GL P E HH V +A++AAV L+ +Y Sbjct: 350 RHIEKDPALTRRFQVLQVDEPDEDTAISMLRGLTPALEKHHGVWIMDEALQAAVRLSHRY 409 Query: 389 INDRHLPDKAIDVIDEAGARARLMPVSK 416 I R LPDKAI ++D A AR + S+ Sbjct: 410 IPARQLPDKAISLLDTACARVAVAQFSQ 437 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 118/336 (35%), Positives = 181/336 (53%), Gaps = 20/336 (5%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 VN I ++VA I + + D + L RL+ V GQ A+ L+E I ARAG Sbjct: 552 VNATVIANIVADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPHALVQLSENIMTARAG 611 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAP 537 + KP+G F+ GP+GVGKTE + +++++ G E L+ +MSEY E HTVS L G+P Sbjct: 612 MADPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNLITINMSEYQESHTVSSLKGSP 671 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ +GG+LT+AV + P++V+LLDEIEKAH DV + QV D G + D GR DF+ Sbjct: 672 PGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFDKGQMEDGEGRFIDFK 731 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTD------AME-EIKKIFTPEFRNRLDNIIWF 650 N +L++T+N G +E S D + D A++ E+ K+F F R+ I + Sbjct: 732 NTILLLTSNVG---SELLSNLFADPDTAPDQDGILSALQPELLKVFPAAFLGRVTVIPYL 788 Query: 651 DHLSTDVIHQV---VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 + + H V +D+ LQ Q ++L+ S + + + GAR + R Sbjct: 789 PLQQSALQHIVRLHLDRIGQRLQ---SQHQLTLQYSDVVVDDVVSRCSVAETGARMLIRY 845 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 I+ N+ + +L Q+ V +DK +N+ T Sbjct: 846 IEQNITPEIGKFILRDHDAIPNQI-VFVDKVENKFT 880 >UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_ECOLX Length = 919 Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 118/256 (46%), Positives = 169/256 (66%), Gaps = 4/256 (1%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 G P + E G+ + + N+ AR G +DP++ R E++ I +LCRRRKNNP++V Sbjct: 165 GQTPRATET--GDTLLARYAKNMTADARNGRLDPVLCRNYEIDLMIDILCRRRKNNPVVV 222 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 GE+GVGK+A+ EGLA RIV G VP+ + + I +LD+G+L AG +G+FEKRFK L+ + Sbjct: 223 GEAGVGKSALIEGLALRIVAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAE 282 Query: 274 -LEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFE 332 + ILFIDE HT+IGAG GG +D +NL+KP L+ G+++ I +TT+ E+ FE Sbjct: 283 VIFSPVPVILFIDEAHTLIGAGNQQGG-LDISNLLKPALARGELKTIAATTWSEYKKYFE 341 Query: 333 KDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR 392 KD AL+RRFQ + ++EP+ E I+ GL YE H V A++AA L+ +Y++ R Sbjct: 342 KDAALSRRFQLVKVSEPNAAEATIILRGLSAVYEQSHGVLIDDDALQAAATLSERYLSGR 401 Query: 393 HLPDKAIDVIDEAGAR 408 LPDKAIDV+D A AR Sbjct: 402 QLPDKAIDVLDTACAR 417 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 94/249 (37%), Positives = 150/249 (60%), Gaps = 14/249 (5%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ I +V+A +P +SQ++ + +L L + GQD AI +L + + ARA Sbjct: 574 VDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPVWLGGTIKGQDLAIASLHKHLLTARAD 633 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL--GIELLR-FDMSEYMERHTVSRLIGAP 537 L +P+G+FL AGP+GVGKTE +QL++ L G + L +MSE+ E+HTVSRLIG+P Sbjct: 634 LRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSP 693 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ +GG+LT+A+ + P++V+LLDE+EKAHPDV N+ Q D G + D GR D + Sbjct: 694 PGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGEMADGEGRLIDCK 753 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKI----FTPEFRNRLDNIIWFDHL 653 N+V +T+N G + + + H D+ E + + F P R++ ++ + L Sbjct: 754 NIVFFLTSNLGYQ------VIVEHADDPETMQEALYPVLADFFKPALLARME-VVPYLPL 806 Query: 654 STDVIHQVV 662 S + + ++ Sbjct: 807 SKETLATII 815 >UniRef50_B5FD85 Type VI secretion ATPase, ClpV1 family n=2 Tax=Vibrio fischeri RepID=B5FD85_VIBFM Length = 860 Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 122/260 (46%), Positives = 177/260 (68%), Gaps = 4/260 (1%) Query: 155 SQPNSEEQAGGEER--MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLL 212 S N + Q+ E + ++ +TTN QLA+ IDP++ R+ E+ + I +L RRRKNNP++ Sbjct: 153 SCANRDSQSSAEHQNALDAYTTNYTQLAKDNKIDPVLCRDSEIRQMIDILARRRKNNPMI 212 Query: 213 VGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLK 272 VGE+GVGKTA+ EGLA +I QG+VP+++ + + SLD+G L AG +G+FE+R ++ Sbjct: 213 VGEAGVGKTALVEGLAIKIAQGEVPDILENVALLSLDLGLLQAGASIKGEFERRLNLVIT 272 Query: 273 QL-EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIF 331 + E T ILFIDE HT+IGAG +G DAANL+KP L+ G++R IG+TT+ E+ Sbjct: 273 AVQESPTPIILFIDEAHTLIGAGGQAGSN-DAANLLKPALARGELRTIGATTWSEYKKYI 331 Query: 332 EKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYIND 391 EKD ALARRFQ + + EP++ + V I+ GL +YE H V A+ AA EL+ +YI+ Sbjct: 332 EKDPALARRFQPVKVDEPNVTQAVTILRGLAERYEESHGVYVRDDAIIAAAELSARYISG 391 Query: 392 RHLPDKAIDVIDEAGARARL 411 R LPDKAID++D A AR ++ Sbjct: 392 RQLPDKAIDLLDTACARVKI 411 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 104/317 (32%), Positives = 176/317 (55%), Gaps = 19/317 (5%) Query: 421 VNVADIESVVARIAR----IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM 476 VN S+VA + IP ++ + + + +LK + GQD+A+ AL +AI+ Sbjct: 523 VNYETCPSLVAEVVSHWTGIPMSTLQRGQATQVLTIKSKLKEQIKGQDQAVIALEKAIQA 582 Query: 477 ARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRL 533 AGL + + P G FLF GP+GVGKT+ ++ + G E L +MSE+ E+HTVSRL Sbjct: 583 TAAGLNNPNSPTGVFLFVGPSGVGKTQTAQAIADLMYGGEQFLTTINMSEFQEKHTVSRL 642 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 IG+PPGYVG+ +GG+LT+AV + P++V+LLDE+EKA ++ N+ Q+ D G D GR+ Sbjct: 643 IGSPPGYVGYGEGGVLTEAVRQRPYSVVLLDEVEKADREIMNLFYQIFDKGVANDGEGRE 702 Query: 594 ADFRNVVLVMTTNAGVRETERKSIGLIHQDN--STDAMEE-----IKKIFTPEFRNRLDN 646 +F+ +++MT+N + E L +Q+ +TDA+ + + + F P R+ Sbjct: 703 INFKQTLIIMTSNLASDQIE----ALCNQEEKPTTDALTKAIRPTLNQYFKPALVGRM-T 757 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 ++ F L + + +VD + +L QL + ++L + +A+ GAR + Sbjct: 758 VVPFFPLDMESMEALVDIRLKQLTEQLSLQQITLHYDEAIIQHIAQSCTLTETGARNIDA 817 Query: 707 VIQDNLKKPLANELLFG 723 +I LK ++++L Sbjct: 818 IINGQLKPAFSSQILLA 834 >UniRef50_Q8IM28 ATP-dependent CLP protease, putative n=6 Tax=cellular organisms RepID=Q8IM28_PLAF7 Length = 1341 Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 105/232 (45%), Positives = 165/232 (71%), Gaps = 1/232 (0%) Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G D GR+KE++R I++L R++K+NPLL+GESGVGKTAI E L++ I++ +VP Sbjct: 517 AQEKGDDHFFGRKKEIKRIIEILGRKKKSNPLLIGESGVGKTAIIEYLSYLILKDNVPYH 576 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + +C I+ L++G+++AGTKYRG+FE++ K LL + + +ILFIDEIH I+GAG+ G Sbjct: 577 LKNCRIFQLNLGNIVAGTKYRGEFEEKMKHLLSNMNKKKKNILFIDEIHVIVGAGSGEGS 636 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA+NL+KP LSS ++ IG+TT+QE+S E D+AL RRF + I + +ET +++ Sbjct: 637 -LDASNLLKPFLSSDNLQCIGTTTFQEYSKFIENDKALRRRFNCVTINPFTSKETYKLLK 695 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 +K YE +H++ YT ++++ V L Y+ + PDKAID++DEAG ++ Sbjct: 696 KIKYNYEKYHNIYYTDDSLKSIVSLTEDYLPTANFPDKAIDILDEAGVYQKI 747 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 69/151 (45%), Positives = 104/151 (68%), Gaps = 2/151 (1%) Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE--LL 517 + GQ+K I+ L++ + A + +KP+G+ L G +GVGKT +SK L E L+ Sbjct: 933 IIGQEKVIDILSKYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVISKYLFNEDNLI 992 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 +MSEY+++H+VS+L G+ PGYVG+ +GG LT++V K P +++L DEIEKAH +V ++L Sbjct: 993 VINMSEYIDKHSVSKLFGSYPGYVGYKEGGELTESVKKKPFSIILFDEIEKAHSEVLHVL 1052 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LQ++DNG LTD+ G K F+N + MTTN G Sbjct: 1053 LQILDNGLLTDSKGNKVSFKNTFIFMTTNVG 1083 >UniRef50_UPI000187E1EB hypothetical protein MPER_11665 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187E1EB Length = 448 Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 114/236 (48%), Positives = 165/236 (69%), Gaps = 3/236 (1%) Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L +LAR G +DP IGR++E+ R IQ+L RR K+NP+L+G GVGKTAI EGLA RIV + Sbjct: 4 LTELARKGKLDPTIGRDEEIRRTIQILSRRTKSNPVLIGPPGVGKTAILEGLASRIVAKE 63 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAG 294 VPE + + + S+D+ +++AG+ RG FE++FKAL++ +E++ N I FIDE+HT+ G Sbjct: 64 VPESLQNKRVLSIDLSAIMAGSGIRGQFEEKFKALIRDIEEEAGNVICFIDEVHTLFNLG 123 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 A G +DA +IKP L+ G ++++G+TT E+ KD AL RRFQ + I+EPS+E T Sbjct: 124 KAE-GSIDAGQMIKPALARG-LQLVGATTPDEYRKTIGKDAALERRFQPVQISEPSVEST 181 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR 410 + I+ GLKP+YE HH V A+ A + +Y++DR LPDKAID++DEA + R Sbjct: 182 ISILRGLKPRYEVHHGVEIFDSALVTAAVYSARYVSDRDLPDKAIDLVDEAASALR 237 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 39/194 (20%) Query: 516 LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFN 575 L+ +MSEY +RHT+SRL+ A PGYVGF +GG LT+AV ++P+AV+LLDE+EKAH Sbjct: 254 LININMSEYHDRHTISRLVEAAPGYVGF-EGGQLTEAVGRNPYAVILLDELEKAHK---- 308 Query: 576 ILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKI 635 + ++T++ GRK DF+N ++ + + ++ + Sbjct: 309 ------ASSSITNSQGRKVDFKNTIICL----------------------IEVLQRTSEY 340 Query: 636 FTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNWLAEKG 694 F PE NRLD ++ F+ LS + I QVV L+ + L K +S +V ++AR WLA G Sbjct: 341 FPPELLNRLDTMLVFNKLSRESILQVVS-----LRAERLRNKRISFDVDEKAREWLANHG 395 Query: 695 YDRAMGARPMARVI 708 Y GAR +AR++ Sbjct: 396 YSEMYGARAIARMV 409 >UniRef50_B3LAU4 ATP-dependent Clp protease, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3LAU4_PLAKH Length = 1243 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 138/414 (33%), Positives = 237/414 (57%), Gaps = 28/414 (6%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLS------NPSAREALEACSVDLVALRQELEAFI 62 +L+ A AR + F+ V +L+AL++ N + L ++ + L++EL + Sbjct: 324 ALHNAVLEARRKKKMFVNVTDILIALINMAQENENCEFLKYLSELNISVNDLKRELIGYD 383 Query: 63 EQTTPVLPA-----SEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQE 117 E+ + P S++ D Q + + R E G+ ++ AI + + Sbjct: 384 EENSFAPPTGRTSHSDQRDDDQSS--------------NQADRREENGS-LMEAIENRDD 428 Query: 118 SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 +Q + + + + N + + ++ + S P S + G +++ T++ Sbjct: 429 NQRMRNVNNEQSNHNFMNNLNNDYLNQTREFKNYEENSFP-SNNKLFGSSYVKDCLTDMV 487 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 A G + GR+KE++R I++L RR+K+NPLL+GESGVGKTAI E L++ I++ VP Sbjct: 488 HAAYEKGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIVEHLSYLILKDKVP 547 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + +C IY L++G+++AGTKYRG+FE++ K LL + + +ILFIDEIH I+GAG+ Sbjct: 548 YHLRNCRIYQLNVGNIVAGTKYRGEFEEKMKHLLSNMNKKKKNILFIDEIHVIVGAGSGE 607 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DA+NL+KP LSS ++ IG+TT+QE++ E D+AL RRF + + S +ET+ + Sbjct: 608 GS-LDASNLLKPFLSSDNLQCIGTTTFQEYTKYIEADKALRRRFNCVPVKPFSAKETLLL 666 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 + +K YE +H++ YT A+++ V L Y+ + PDKAID++DEAGA ++ Sbjct: 667 LKKIKYNYEKYHNIYYTNDALKSIVMLTEDYLPTANFPDKAIDILDEAGAYQKI 720 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 68/152 (44%), Positives = 104/152 (68%), Gaps = 2/152 (1%) Query: 459 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE--L 516 ++ GQ+K I+ L+ + A + +KP+G+ L G +GVGKT +SK L E L Sbjct: 851 IIIGQEKVIDILSRYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVISKYLFNEDNL 910 Query: 517 LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNI 576 + +MSEY+++H+VS+L G+ PGY+G+ +GG LT++V K P +++L DEIEKAH +V ++ Sbjct: 911 IVINMSEYIDKHSVSKLFGSYPGYIGYKEGGELTESVKKKPFSIILFDEIEKAHSEVLHV 970 Query: 577 LLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LLQ++DNG LTD+ G K F+N + MTTN G Sbjct: 971 LLQILDNGMLTDSKGNKVSFKNTFIFMTTNVG 1002 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 16/119 (13%) Query: 632 IKKIFTPEFRNRLD-NIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQEARNW 689 +KK F PEF NR+D II+ L DV++ + I +L+ ++ + K ++L + Q+ + Sbjct: 1116 LKKKFLPEFLNRIDEKIIFRQFLKRDVVN-IFQNMIEDLKKRIKKRKNLNLIIEQDVIKY 1174 Query: 690 LAEKG---YDRAMGARPMARVIQDNLKKPLA----------NELLFGSLVDGGQVTVAL 735 + YD GAR + R + ++ P+A N+ + SL +G ++ V L Sbjct: 1175 ICSDENNIYDMNFGARSIRRALYKYIEDPIASFLISNLCEPNDSIHVSLSNGNKINVQL 1233 >UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F0302 RepID=D1QW31_9BACT Length = 815 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 127/323 (39%), Positives = 197/323 (60%), Gaps = 5/323 (1%) Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 +K + V+ ++E+VVA IP + ++D L + +L V GQ+KAI L +AI Sbjct: 480 AKGMQAVSPLEVEAVVAGDTGIPIGKIQAQEKDRLLGIETKLCERVKGQNKAITTLADAI 539 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVS 531 +R+GL KP+GSF F GPTG GKTE+T L++ L + ++RFDMSE+ E H+ + Sbjct: 540 IESRSGLSDPKKPIGSFFFLGPTGTGKTELTKSLAELLFDDDSAMIRFDMSEFKEEHSAA 599 Query: 532 RLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 L GAPPGYVG+++GGLL + + P++V+L DEIEKAH V+++ LQ+MD G + D G Sbjct: 600 LLYGAPPGYVGYEEGGLLVTKIRQKPYSVVLFDEIEKAHSSVYDVFLQMMDEGKIHDKLG 659 Query: 592 RKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 R+ DF N +++ T+N G + ++ I HQ S + +E + K F PEF RL I+ F Sbjct: 660 REGDFSNSIIIFTSNIGSQWIAQQ-IQEGHQPKSNELIEVMSKYFRPEFLGRLTEIVPFS 718 Query: 652 HLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 ++ V ++ LQ Q LDQK + ++++ E ++L EKGY GARP+A VI+ Sbjct: 719 PITESVAQEIFMLQFSRLQKQLLDQKNIQVDLAPETISYLTEKGYSPQYGARPIAGVIRT 778 Query: 711 NLKKPLANELLFGSLVDGGQVTV 733 LKK ++ ++ ++ G +V V Sbjct: 779 YLKKTISKLIVSETIKQGDKVCV 801 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 101/443 (22%), Positives = 189/443 (42%), Gaps = 30/443 (6%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQELEAFIEQTTP 67 ++ +A A AR+ +H V HL A+++ + RE L + D+ + ++ F Sbjct: 13 AIKLAKAMARQDKHHSYGVAHLATAMMTEQTGLREILTSMQKDVAYI---MDWFDTHKEM 69 Query: 68 VLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKH 127 + + E D + VL A G + V V AI + + + Sbjct: 70 YISSGNEASDIIADGEVKLVLDEAERSKIKLGTDYVDALCVFTAIVRDGVVYSHQQIEGL 129 Query: 128 EVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDP 187 VS D++++ + G P + P+S + A +R E Sbjct: 130 GVSEEDILDYFNAGAS---PFSIGEEQEMPSSIQYASDLKRPEILEEG----------KT 176 Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS 247 +IGR KE+ ++ L R LLVG G+GKTAI + LA V + E++ + + Sbjct: 177 IIGRSKEVRLILENLERAENKAVLLVGAPGIGKTAIVKALAHE-VASNKDELINQTALVN 235 Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASGGQVDAANL 306 L+ +LA T + ++ ALL++L T ++L ID++ ++ G S N+ Sbjct: 236 LNTPKILAQTSSEAEVGQKITALLQKLNPSKTKAVLVIDDLQMLLENGNTSNA-TSLINI 294 Query: 307 IKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI--TEPSIEETVQIINGLKPK 364 + +S G + ++ + + EK + R I++ EP+I ++ + G K + Sbjct: 295 LDAQISEGTVTLVMLLSTDAYRKHIEK-HPIVNRLNVINVEQLEPNILKSALL--GHKTQ 351 Query: 365 YEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA 424 +AH+ + T +A+ +A LA +Y ++ P +D++D A RL S + + Sbjct: 352 LQAHYSLAVTEEAIDSACSLANRYYKEKSQPASTLDLLDSTAASVRL---SNKNAQETIT 408 Query: 425 DIESVVARIARIPEKSVSQSDRD 447 + + + P + V DRD Sbjct: 409 QLTETYQKYCKQPIEEV--KDRD 429 >UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ClpB n=51 Tax=Proteobacteria RepID=Q3JL54_BURP1 Length = 1042 Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 162/426 (38%), Positives = 228/426 (53%), Gaps = 29/426 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL--EACSVDLVALRQELE 59 LN +L A RH+ + VEHLL L PSA AL AC D LR++ + Sbjct: 13 LNPYCRNALESAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRACGADAARLRRQAD 72 Query: 60 AFIEQTTPVLPASEEERDT-QPTLS--FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQ 116 A ++ PA + R P+L Q A + + VA + Q Sbjct: 73 AALDAR----PAGDGGRPAFAPSLLALLQDAWLIASLELGDTHIRSAAVLAAAVARAARQ 128 Query: 117 ESQAA----YLLRKHEVSRLDVVNFISHGTRKDEPTQSSD-----PGSQPNSEEQAGGEE 167 S LRK + V F S + +++S PG ++ + + Sbjct: 129 PSPGGDDVLQSLRKDAL----VARFASGACARSIESRASGALDAAPGEASDTRDASSAIA 184 Query: 168 R-MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 R E+FT AR GGIDP+ GR+ E+ + + +L RRRKNNP+ VGE GVGKTA+ EG Sbjct: 185 RYCEDFTAK----ARAGGIDPVFGRDAEIRQIVDILARRRKNNPVCVGEPGVGKTAVVEG 240 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFID 285 LA RI +GDVP + T+ LD+G L AG +G+FE+R K ++ ++ T +LFID Sbjct: 241 LALRIAEGDVPATLRGATLLGLDLGMLQAGASVKGEFEQRLKRVIAEIRASQTPVVLFID 300 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 E HT+IGAG A+G AANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ + Sbjct: 301 EAHTLIGAGGAAGASD-AANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVK 359 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 + P + +V I+ GLK +Y+ H V A+ AA EL+ +YI R LPDKAID++D A Sbjct: 360 LDSPDVATSVMILRGLKERYQDAHGVTIRDDALVAAAELSARYITGRQLPDKAIDLLDTA 419 Query: 406 GARARL 411 AR ++ Sbjct: 420 CARVKV 425 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 87/186 (46%), Positives = 125/186 (67%), Gaps = 3/186 (1%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VVA I + + + + L D L+ + GQD AIE ++EA+K AG+ Sbjct: 628 IADVVADWTGIAAGKLRRDRANVMLRLADTLRRRIRGQDHAIEQISEAVKAGAAGVHDPR 687 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+G FL AGP+G GKTE + ++ AL G E ++ +MSE+ ERH VSRLIG+PPGYVG Sbjct: 688 RPLGVFLLAGPSGTGKTETALAVADALFGDERSIVVVNMSEFQERHDVSRLIGSPPGYVG 747 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + +GG+LT+AV + P++V+LLDE+EKAHPDV N+ QV D G+L+D G++ DF N V+ Sbjct: 748 YGEGGMLTEAVRQRPYSVVLLDEVEKAHPDVLNLFYQVFDKGSLSDGEGKEVDFANTVIF 807 Query: 603 MTTNAG 608 +T+N G Sbjct: 808 LTSNLG 813 >UniRef50_C9XYK6 Chaperone protein clpB n=1 Tax=Cronobacter turicensis RepID=C9XYK6_CROTZ Length = 924 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 122/263 (46%), Positives = 173/263 (65%), Gaps = 5/263 (1%) Query: 148 TQSSDPGSQPNS-EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRR 206 +QS+ PG + + Q+ G + ++T++ LAR G IDP++GR++E+ I +L RRR Sbjct: 201 SQSAVPGEASGAIKLQSTGS--LAQYSTDVTALAREGKIDPVLGRDREISTIIDILLRRR 258 Query: 207 KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKR 266 +NNPLL G++GVGKTA+ EGLA I +GDVP + D + SLDI +L AG +G+FE R Sbjct: 259 QNNPLLTGDAGVGKTAVVEGLACAISRGDVPPSLCDVRLLSLDIVALSAGASMKGEFEAR 318 Query: 267 FKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQ 325 KA+L++ ILF+DEIH +IGAG S G DAANL+KP L+ G++R IG+TT+ Sbjct: 319 LKAVLEEAASSEQPVILFVDEIHNLIGAG-NSAGTGDAANLLKPALARGQLRTIGATTWS 377 Query: 326 EFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 385 EF EKD AL RRFQ + + EP ++ G+ P E HH+V +A+RAAV+L+ Sbjct: 378 EFKRHIEKDPALTRRFQVLQVEEPDENSATDMLRGMVPVLELHHNVWILDEALRAAVKLS 437 Query: 386 VKYINDRHLPDKAIDVIDEAGAR 408 ++I R LPDKAI ++D A AR Sbjct: 438 HRFIPSRQLPDKAISLLDTACAR 460 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 109/313 (34%), Positives = 177/313 (56%), Gaps = 19/313 (6%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + ++V+ IP + Q + + ++ L RL V GQ A++ ++E I MAR GL Sbjct: 588 VAAIVSEWTGIPVGQMLQDEMNIVRELPVRLAERVTGQTFALKQISERILMARTGLADPV 647 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P G F+ GP+G GKTE + +++ + G E L+ +MSEY E HTVS L G+PPGYVG Sbjct: 648 RPTGVFMLTGPSGTGKTETALAIAENMYGGEHNLITINMSEYQEAHTVSALKGSPPGYVG 707 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + +GG+LT+AV + P++V+LLDEIEKAHPDV + QV D G + D GR DFRN +++ Sbjct: 708 YGEGGILTEAVRRKPYSVILLDEIEKAHPDVHELFFQVFDKGRMEDGEGRLIDFRNTIIL 767 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEE---------IKKIFTPEFRNRLDNIIWFDHL 653 +T+N G + I L+ +D +T EE + K+F F R+ +I + L Sbjct: 768 LTSNVG-----SEKISLLCRDENTVPDEEGLLTLLHNDLLKVFPAAFLGRV-TVIPYLPL 821 Query: 654 STDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 +D + +V + + +L + V+L+ + EA ++ E+ + GAR + R I+ + Sbjct: 822 KSDALMLIVKMQLKRVANRLYENHNVTLQYNDEAVRYIVEQCHVAETGARILIRYIEQKI 881 Query: 713 KKPLANELLFGSL 725 + L+ +L Sbjct: 882 IPKIGGILMDSAL 894 >UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomonas reinhardtii RepID=A8I1M5_CHLRE Length = 997 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 160/423 (37%), Positives = 236/423 (55%), Gaps = 25/423 (5%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELEAFIEQTTP 67 ++ +A A A+ H + EH+LL L++ S ++ V + +EA + P Sbjct: 85 TVMIAQAEAKAFGHTEVNTEHILLGLVAEESLSKNGYLNSGVSSERAKAAVEALFGRKRP 144 Query: 68 V-----LPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 V +P S E R ++ + A + S N ++ ++L+A+ S + Sbjct: 145 VSHGESIPFSREVR---------KMFENATHECKRSNVNWISPEHILLAMLSMPDCNGKR 195 Query: 123 LLRKHEVSRLDVVNFISH-GTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 +L H +S DV + G R T + + + + G + E + +L R Sbjct: 196 VL--HSLS-ADVEGLKAEAGKRLKGDTDAEQAKKKQGAAAKEQGPKMTEEYCKDLCAEVR 252 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ---GDVPE 238 G IDP++GR++E+ R Q+L RR KNNP+L+GE GVGKTAIAEGLA IV +PE Sbjct: 253 AGRIDPVVGRDREVGRVCQILARRTKNNPILLGEPGVGKTAIAEGLAAAIVHRAASPLPE 312 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + I LD+G L+AG K RG+ E R L+ ++ + N IL IDEIHT++GAG+ Sbjct: 313 FLHSKRILQLDVGLLIAGAKERGELESRVTKLIAEIREAGNIILMIDEIHTLVGAGSVGR 372 Query: 299 GQ---VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 G +D ANL+KP L+ G+ +VIG+TT E E+D AL RRFQ + + EP+ E T+ Sbjct: 373 GGGGGLDIANLVKPALARGEFQVIGATTLDEHRKYIERDAALERRFQPVTVDEPTPEATL 432 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 I+ GLK +YE HH YT +A+ AAV L+ KYI DR LPDKAID+IDEAG+RAR+ + Sbjct: 433 TILQGLKERYERHHRCAYTEEALAAAVALSHKYIADRFLPDKAIDLIDEAGSRARIAAYT 492 Query: 416 KRK 418 R+ Sbjct: 493 ARQ 495 Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 125/336 (37%), Positives = 187/336 (55%), Gaps = 30/336 (8%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V V DIE++VA IP + +S +++ L N+ L V GQ A+EA++ A+ AR G Sbjct: 565 VGVEDIEAIVAAWTSIPVERMSDGEKERLLNMRHTLASHVVGQADAVEAISTALCRARCG 624 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAP 537 L +PV + LF GPTGVGKTE+ LS+ LLR DMSEYMERH+VS+L+GAP Sbjct: 625 LNLPRRPVAALLFVGPTGVGKTELAKVLSEQYYGSREALLRLDMSEYMERHSVSKLVGAP 684 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVGF GG LT+A+ + P +V+L DEIEKAHPDVF+ILLQ++++G LTD+ GR F+ Sbjct: 685 PGYVGFGDGGKLTEAIRRRPFSVVLFDEIEKAHPDVFSILLQILEDGRLTDSQGRVVSFK 744 Query: 598 NVVLVMTTNAGVRET--------------ERKSIGLIHQDNSTDAME----------EIK 633 N ++++T+N G R R +G D A + E++ Sbjct: 745 NAMIILTSNVGSRLIAAAGNAARNGAGVFSRPGMGAGPTDEKLQAAQAFKLKQEVLGEVR 804 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEK 693 F PE NR D + F L + + + + + + ++G+ L ++ + + Sbjct: 805 GFFAPELLNRFDETVVFQRLRREDVAHIAQLLLAQTIARAGERGLGLRIAPALMEHIVAE 864 Query: 694 GYDRAMGARPMARVIQDNLKKPLANELL---FGSLV 726 G+ GARP+ + I + PL++ +L FG+ V Sbjct: 865 GHSDEYGARPLRQAIVRLVDDPLSDAVLHRKFGAGV 900 >UniRef50_C5ZYU5 ATP-dependent Clp protease subunit n=2 Tax=Proteobacteria RepID=C5ZYU5_9HELI Length = 876 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 116/249 (46%), Positives = 170/249 (68%), Gaps = 6/249 (2%) Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 +T +L Q A+ G ID ++GR+KE+ +AI +L RRR+NNP+L GE+GVGKTAIAEGLA R+ Sbjct: 186 YTIDLTQKAKEGKIDEIVGRDKEIRQAIDILIRRRQNNPILTGEAGVGKTAIAEGLAVRL 245 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTI 290 + +VP ++ + SLDIG L AG +G+FE+R K +++ ++ + ILFIDE HT+ Sbjct: 246 AKNEVPSILKGYVLRSLDIGLLQAGASMKGEFEERLKKVIEAVQNSSTPIILFIDEAHTL 305 Query: 291 IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 350 IGAG + GQ DAANL+KP L+ G++R + +TT+QE+ FEKD AL+RRFQ I + EP Sbjct: 306 IGAG-GTAGQNDAANLLKPALARGELRCLAATTWQEYIKYFEKDPALSRRFQNISVEEPD 364 Query: 351 IEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR 410 E+ +Q++ + E H V T +A+ A+V+L+ +Y+ R LPDK+ ++D A AR Sbjct: 365 DEKCIQMMRSIAKSLEKFHHVTITNEAIIASVKLSRRYLPSRKLPDKSTSILDTASARVA 424 Query: 411 L----MPVS 415 L MP S Sbjct: 425 LSQSSMPES 433 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 107/356 (30%), Positives = 190/356 (53%), Gaps = 28/356 (7%) Query: 406 GARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDK 465 G ++PV V+ I ++++ IP + + + ++ L + L + GQ+ Sbjct: 531 GENPMILPV------VDAQAIAAIISEWTGIPLGRMIKDEAKSILALEEELAKNIIGQNH 584 Query: 466 AIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMS 522 ++ + ++I A+A L KP F+ AGP+GVGKTE + +++ + ++ +MS Sbjct: 585 SLSLIAKSIITAKANLADPQKPQAIFMLAGPSGVGKTETALSIAQMVYGSRDNIITINMS 644 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 E+ E HTVS L GAPPGYVG+ +GG+LT+AV K P++V+LLDEIEKAH D+ I QV D Sbjct: 645 EFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRKKPYSVILLDEIEKAHHDIHEIFFQVFD 704 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN--STDAMEE-----IKKI 635 G + D GR DFRN ++++TTN G E L N + +E ++K+ Sbjct: 705 KGRMEDGAGRLVDFRNTIIILTTNVGDSEI----FDLCEDGNYPKPEILERAIRPVMQKV 760 Query: 636 FTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQ--VQLDQKGVSLEVSQEA--RNWLA 691 F RL + ++ L+ + +H+++D ++LQ +Q Q+ E + + ++ + Sbjct: 761 FPAALLGRLVVVPYYP-LNKEALHKIID---LKLQKIIQRIQEYYKAEFAYDVSLKDEIM 816 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 + + A GAR + +I + + ++ + L +L V L+ + E++Y F+ Sbjct: 817 TRCNNIASGARMIDAIINNEILPNISIKFLQNNLETKKISKVFLEVKNGEISYQFE 872 >UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding subunit n=3 Tax=Burkholderia RepID=C5ALE8_BURGB Length = 933 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 133/327 (40%), Positives = 189/327 (57%), Gaps = 15/327 (4%) Query: 99 GRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDV-------VNFISHGTRKDE-PTQS 150 G + + GA ++ A+ E + L E R+ V +I+ D+ P Sbjct: 107 GEHRIRGAWLMAALIETPELRRVLLSCSREFGRIPVDGLHEALPAWIAGSPEADDTPYDH 166 Query: 151 SD-----PGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRR 205 SD PG ++ +E F +L A G IDP++GR+ E+ + VL RR Sbjct: 167 SDFSPAVPGEASDAMAAPARGSSLEQFCADLTARALKGEIDPVVGRDIEIRTMVDVLLRR 226 Query: 206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK 265 R+NNPLL G++GVGKTA+ EGLA I +GDVP +A+ + +LD+G+LLAG RG+FE Sbjct: 227 RQNNPLLTGDAGVGKTAVVEGLALAIARGDVPPKLAEVRLLNLDVGALLAGASMRGEFEA 286 Query: 266 RFKALLKQL-EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTY 324 R K++++ + ILFIDEIHT+IGAG +G DAANL+KP L+ G +RVIG+TT+ Sbjct: 287 RLKSVIEAAGKAPVPVILFIDEIHTLIGAGGQAGTG-DAANLLKPALARGTLRVIGATTW 345 Query: 325 QEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVEL 384 E+ EKD AL RRFQ + + EP V ++ GL + HH V +AVRA+V L Sbjct: 346 AEYKRHIEKDPALTRRFQVLQVAEPEPGAAVDMVRGLVGTFSRHHGVVVLDEAVRASVML 405 Query: 385 AVKYINDRHLPDKAIDVIDEAGARARL 411 + +Y+ R LPDKAI ++D A AR L Sbjct: 406 SHRYLPSRQLPDKAISLLDTACARVAL 432 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 108/314 (34%), Positives = 172/314 (54%), Gaps = 19/314 (6%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ A + ++++ IP + + ++ L + L V GQ A+ + E I+ ARAG Sbjct: 578 VSEAMVAAIISDWTGIPVGRMVTDEIAAVRRLSETLSARVVGQTDALRQIAERIQTARAG 637 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAP 537 L KP+G FL GP+GVGKTE + L++AL G E L+ +MSEY E HTVS L GAP Sbjct: 638 LADPAKPLGVFLLTGPSGVGKTETALALAEALYGGEQNLITINMSEYQEAHTVSSLKGAP 697 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ +GG+LT+AV + P++V+LLDEIEK+H DV + QV D G + D +GR DFR Sbjct: 698 PGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKSHSDVKEMFFQVFDKGYMEDGDGRYIDFR 757 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNS----TDAMEE-----IKKIFTPEFRNRLDNII 648 N +++T+N G + + + D + +DA+ + K F F R+ ++ Sbjct: 758 NTTILLTSNVGA-----ELLTSLCADEALAPESDALRMALGPVLLKAFPAAFLGRV-TVV 811 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 F L+ + Q+ ++ + ++ D GV L + +++ + + GAR M Sbjct: 812 PFRPLAQGSLVQIARLYLDRVARRMADHHGVELVYAPAVADYVVARCLVQETGARLMIGF 871 Query: 708 IQDNLKKPLANELL 721 I+ +L L+ L Sbjct: 872 IEQHLLPALSRHWL 885 >UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n=12 Tax=Bacteroidales RepID=Q64SE5_BACFR Length = 812 Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 136/374 (36%), Positives = 216/374 (57%), Gaps = 19/374 (5%) Query: 373 YTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT--------VNVA 424 Y + + +V L K ++D ++ DK D+ +AG RL + K K + + Sbjct: 433 YRSVFSKISVVLTTK-LSDNYVWDKEDDIAIKAG---RLSGIIKELKALSDQSIEEIRSS 488 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 +IE++VA IP + ++D L ++ +L+ V GQ++AI L++AI +R+GL Sbjct: 489 EIEAIVAECTNIPIGKIQAREKDRLLSIESKLQERVKGQNRAITTLSDAIIESRSGLSDP 548 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYV 541 KP+GSF F GPTG GKTE+T L++ L + ++RFDMSE+ E H+ + L GAPPGYV Sbjct: 549 KKPIGSFFFLGPTGTGKTELTKSLAELLFDDESAMIRFDMSEFKEEHSAALLYGAPPGYV 608 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+++GGLL + + P++V+L DEIEKAH V+++ LQ+MD G + D GR+ DF N ++ Sbjct: 609 GYEEGGLLVTQIRQKPYSVVLFDEIEKAHSSVYDVFLQMMDEGKIHDKLGREGDFSNSII 668 Query: 602 VMTTNAGVRE-TERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 + T+N G + E+ G H +S +E + + F PEF RL ++ F + +V Q Sbjct: 669 IFTSNIGSQWIVEQIQSG--HTPDSGKLIEVMAQYFRPEFLGRLTEVVPFAPIDENVAKQ 726 Query: 661 VVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719 + + LQ QL QK + L +S EA LA KGY GARP+A VI+ +KK ++ Sbjct: 727 IFNLHFGRLQEQLMKQKNIQLNLSDEALQHLANKGYSPKYGARPIAGVIRTYIKKSVSRL 786 Query: 720 LLFGSLVDGGQVTV 733 ++ + G + + Sbjct: 787 IVSEQIKSGDNIVI 800 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 100/439 (22%), Positives = 191/439 (43%), Gaps = 36/439 (8%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSVDLVALRQELEAFIEQTTP 67 +L +A A + +H V HL++A+ + N +E L + D+ + + + E Sbjct: 13 ALKIARGMALQDKHNTFGVSHLVMAMFAENTGLKEILSSMQKDVGYIMEWFDTHREMYRS 72 Query: 68 VLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKH 127 ++EE +P +VL + G + + V AI E + + Sbjct: 73 SGTSTEE---VEPDEEVSKVLDESERSKIKLGADSIDSICVFTAILREGVVYSHQQIEIL 129 Query: 128 EVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN----FTTNLNQLARVG 183 +VS D+++ + T P S GEE + NL + + Sbjct: 130 DVSEDDILSHYNALT----PLHSYQ------------GEEMQITASVPYADNLKKQETIN 173 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 ++GREKE+ ++ L R L+VGESG+GK++I I + + E++ Sbjct: 174 AGGFVVGREKEVRTILECLERSENKGILIVGESGIGKSSIINAFVKDICENE-DEMLKQI 232 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 +I L+ LLA T + ++ L+ +L Q ++L ID++ ++ + SG Sbjct: 233 SIVGLNTAKLLASTSSETEIAQKVVNLMHKLNQLEQAVLVIDDLQVLL-ENSVSGKASTL 291 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE---PSIEETVQIING 360 N++ +S G ++ + T + EK + R I I E ++E +Q+ Sbjct: 292 INILSAQISEGAANLVLTLTNDSYRKNIEK-HPIEGRLDIIKIEELDTATLESAIQL--- 347 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 K + E ++++R + ++ ++ L+ +Y +R LP AID++D A RL + R Sbjct: 348 HKKRIENYYELRISDACIKDSIALSKRYFKERSLPSAAIDLLDRTAAAVRLCNKNAR--- 404 Query: 421 VNVADIESVVARIARIPEK 439 +V+D+E+ I + EK Sbjct: 405 ASVSDLEADFEEIKSLDEK 423 >UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmodium RepID=B3L4X1_PLAKH Length = 906 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 151/442 (34%), Positives = 238/442 (53%), Gaps = 59/442 (13%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 LN+ + + LN A+ + H + H+L AL + L+ SV+ L+Q L+ Sbjct: 38 LNRTINI-LNAGKNIAKRYGHSQLKPVHILSALAKSDYGSNLLKENSVNASNLKQYLDTA 96 Query: 62 IEQTTPVLPASEEERDTQPTLSF----QRVLQRA-------------VFHVQSSGRNEVT 104 +EQT P D + +++ + VL A V H+ S N+ Sbjct: 97 LEQTRAGPPL-----DNKSKIAYSDQVKEVLAEAEALANKYKSQKVDVEHLLSGLMNDEL 151 Query: 105 GANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAG 164 +L ++ E+ L K E T+KD+ +S Sbjct: 152 VNEILNEVYLTDEAVKGILKSKLE------------KTKKDKDGKS-------------- 185 Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 G +E F +NLN+ R G + + GR++E+ I+ L R KN+P+LVG+ G GKT I Sbjct: 186 GGLYLEQFGSNLNEKVRNGKLQGIYGRDEEIRAVIESLLRYNKNSPVLVGQPGTGKTTIV 245 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LF 283 EGL +RI +GDVP+ + T+ SL+ +GT YRG+FE R K ++K+L+ N I LF Sbjct: 246 EGLVYRIEKGDVPKELRGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKNKIILF 305 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 +DEIH ++GAG A GG DAANL+KP+LS G+I++IG+TT E+ E A RRF+K Sbjct: 306 VDEIHLLLGAGKAEGG-TDAANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFERRFEK 364 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 I + PS+E T++I+ LK KYE+ + + T KA+ AA +++ ++I DR+LPDKAID+++ Sbjct: 365 ILVEPPSVENTIKILRSLKSKYESFYGIHITDKALVAAAKVSDRFIKDRYLPDKAIDLLN 424 Query: 404 EAGA--------RARLMPVSKR 417 +A + + R++ V++R Sbjct: 425 KACSFLQVQLSGKPRIIDVTER 446 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 127/340 (37%), Positives = 197/340 (57%), Gaps = 30/340 (8%) Query: 426 IESVVARIARIPEKSVS-QSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 + + R + +P S+S +S + LK L + L + G + I++L++A+ A G+ Sbjct: 569 VSYIYLRDSGMPLGSLSFESSKGALK-LYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDP 627 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL-------LRFDMSEYMERHTVSRLIGAP 537 KP+G+FLF GPTGVGKTE L+K L IEL +R +MSE+ E H+VS++ G+P Sbjct: 628 EKPIGTFLFLGPTGVGKTE----LAKTLAIELFSSKDNLIRVNMSEFTEAHSVSKITGSP 683 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVGF G LT+AV + PH+V+L DE+EKAHPDVF +LLQ++ +G + DN+ R DF Sbjct: 684 PGYVGFSDSGQLTEAVRERPHSVVLFDELEKAHPDVFKVLLQILGDGYINDNHRRNIDFS 743 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAME--------------EIKKIFTPEFRNR 643 N +++MT+N G ++K L N++D E + KK+F PEF NR Sbjct: 744 NTIIIMTSNLGAELFKKK---LFFDANNSDTPEYKRVFDDLRIQLIKKCKKVFKPEFVNR 800 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 +D I F+ LS + ++V +L+ +L++K + + VS++A +++ ++ YD +GARP Sbjct: 801 IDKIGIFEPLSKKNLREIVKLRFKKLEKRLEEKNIHVSVSEKAVDYIIDQSYDPELGARP 860 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 I+ + A L LVD V V +K N L Sbjct: 861 TLIFIESVIMTKFAIMYLKKELVDDMDVHVDFNKAANNLV 900 >UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 RepID=C9MS36_9BACT Length = 813 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 134/351 (38%), Positives = 203/351 (57%), Gaps = 8/351 (2%) Query: 396 DKAIDVIDEAGARARLMPVSKRK--KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLG 453 D + +D+ G + V +K + V+ +IESVVA IP + ++D L + Sbjct: 459 DSTQEKLDKLGKMLNELSVLSQKGIEKVSSLEIESVVADDTGIPIGKIQAQEKDRLLGIE 518 Query: 454 DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL- 512 +L V GQDKAI L++AI +R+GL KP+GSF F GPTG GKTE+T L+ L Sbjct: 519 TKLHERVKGQDKAIRTLSDAIIESRSGLSDPKKPIGSFFFLGPTGTGKTELTKSLADLLF 578 Query: 513 --GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH 570 ++RFDMSE+ E H+ + L GAPPGYVG+++GGLL + + P++V+L DEIEKAH Sbjct: 579 DDDTAMIRFDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVTKIRQKPYSVVLFDEIEKAH 638 Query: 571 PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAME 630 V++I LQ+MD G + D GR+ DF N +++ T+N G + + I HQ S + +E Sbjct: 639 SSVYDIFLQIMDEGKVHDKLGREGDFSNSIIIFTSNIGSQWIAEQ-IQKGHQPTSNELIE 697 Query: 631 EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNW 689 + K F PEF RL ++ F ++ V Q+ LQ Q L+QK + L+++ E + Sbjct: 698 VMSKYFRPEFLGRLTEVVPFSPITEAVAQQIFLLQFSRLQKQLLEQKDIQLDLAPETIAY 757 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 L KG+ GARP+A V++ LKK ++ +L+ + G +A K+ N Sbjct: 758 LTSKGFSPQYGARPIAGVVRTYLKKTIS-KLIVSEAIKPGDHIIATYKDGN 807 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 87/410 (21%), Positives = 174/410 (42%), Gaps = 31/410 (7%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQELEAFIEQTTP 67 ++ +A A A + +H V HL++A+L+ + RE L + ++ + E + E Sbjct: 13 AIKLAKAMAHQDKHLSFGVAHLVIAMLTEQTGLREILNSMQKEVTYISDWFETYREMYVG 72 Query: 68 VLPASEEERDTQPTLS---FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLL 124 V E D ++ + VL A G + V V AI + + + Sbjct: 73 V------EHDAGEIIADHEVETVLDEAERSKIKLGTDSVDALCVFSAIVRDGVVYSHQQI 126 Query: 125 RKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGG 184 V+ +++ + T P D GS + ++L + + Sbjct: 127 ESIGVTEDEIMEYFEASTSPLSPVAEMDMGSSIQ-------------YVSDLRRAELLEE 173 Query: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCT 244 +IGR KE+ ++ L R + LLVG GVGKT I LA + + + E++ + Sbjct: 174 GKSIIGRSKEIRLILETLERSERQGILLVGAPGVGKTGIIRALAHEM-EINQDEIINQTS 232 Query: 245 IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQVDA 303 + L+ +LA + + ++ LL+++ Q + +L ID++ ++ +G + Sbjct: 233 LVGLNTSKILAQSGNETEITQKLTGLLQKMNQAKSRGVLVIDDLQLLLESGNPTAATYIL 292 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI--TEPSIEETVQIINGL 361 NL + G + ++ + F EK ++A R I++ EP+I + + + Sbjct: 293 NNL-DAQICDGAVTLLMVLSMDAFRKHIEK-HSIANRLNIINVEELEPNILRSALLKH-- 348 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 + +A++ + T +A +A L+ +Y ++ P +D+ID A RL Sbjct: 349 RTILQAYYSLPMTEEAFISAYNLSNRYYKEKSQPASTLDLIDSTAASVRL 398 >UniRef50_B8NZA1 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8NZA1_POSPM Length = 682 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 126/308 (40%), Positives = 186/308 (60%), Gaps = 13/308 (4%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VV R +IP + + SD+ L L D L V GQ +A++++T AI+++R GL + + Sbjct: 379 IAEVVERATKIPVQRLLASDKTRLLGLEDALAQQVVGQPEAVKSVTNAIQLSRTGLNNTN 438 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIEL-------LRFDMSEYMERHTVSRLIGAPP 538 +P+ S LF GP+G GKT LSKAL EL +R D SEY + H++SRLIG+PP Sbjct: 439 RPIASLLFTGPSGTGKT----LLSKALAQELFGQTTSMVRIDGSEYSQSHSISRLIGSPP 494 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+DQGG LT+ V + P+ ++LLDEIEK + + LQV+D G LTD +GR DFRN Sbjct: 495 GYVGYDQGGQLTEYVRRTPYCIVLLDEIEKTCLEFLTLFLQVLDEGRLTDGHGRLVDFRN 554 Query: 599 VVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKI-FTPEFRNRLDNIIWFDHLSTDV 657 V++MT+N G ++ G I + M+ K + F EF NR+D+++ F +S V Sbjct: 555 CVIIMTSNVGADLLSAEN-GPIQEAVRLKVMDRFKDVRFPVEFLNRIDDVVMFRTMSQAV 613 Query: 658 IHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 + ++ K + +L+ + K + L++ +A WL G GARP+ARVIQ L PL+ Sbjct: 614 MKSILKKNLQDLKQREGMKRLHLDIDAQAETWLISVGISPQYGARPLARVIQRELLNPLS 673 Query: 718 NELLFGSL 725 LL G++ Sbjct: 674 QRLLEGTV 681 Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 115/248 (46%), Positives = 161/248 (64%), Gaps = 10/248 (4%) Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 + T++ LAR G ++ IGR++E+ R IQ+LCRR KN+ +L+GE GVGKTA+AEGLA RI Sbjct: 5 YATDMTALAREGKLNDTIGRDEEIRRVIQILCRRTKNSAVLIGEPGVGKTAVAEGLAHRI 64 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK-----RFKALLKQLEQDTNS-ILFID 285 DVPE + TIYSLD+G+L AG +G++E R L +Q+ N ILFID Sbjct: 65 NSRDVPEHLKG-TIYSLDLGALFAGAG-KGEYEAASLFPRSLRLYWLTQQNANPVILFID 122 Query: 286 EIH--TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 E+H T+ + + +DAANL+KP L+ G+ R IG+TT E+ EKD AL RRF Sbjct: 123 ELHLITVGKSSSGQSSGMDAANLLKPALARGQFRCIGATTLAEYREHIEKDGALERRFAT 182 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + + EP+IEE I+ G + +YE+HH V +A+ AV+LA +Y+ R LPD A D++D Sbjct: 183 VLVNEPTIEEATTILRGTRERYESHHRVWIMDQAIVTAVKLAHRYLTARRLPDSAFDLMD 242 Query: 404 EAGARARL 411 EA A AR+ Sbjct: 243 EACASARV 250 >UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN Length = 867 Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 145/413 (35%), Positives = 223/413 (53%), Gaps = 30/413 (7%) Query: 17 AREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELEAFIEQTTPVLPASEE 74 R +RHE++ +EH L L+ L + + +L+ I Q PV AS + Sbjct: 31 CRSYRHEYVELEHWLKILMDQQRGDIPALLTHYGLSQTVISTQLDRII-QHMPVTKASVQ 89 Query: 75 ERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLD 133 + ++ + V++ + Q + + + +++L+A+ + + Q E +L Sbjct: 90 DLSSR----LESVVEGGLVLSQLMASPSPIRTSHILLALLQDTQHQRWLYRLCDEFKKLP 145 Query: 134 V-----------VNFISHGT---RKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 V VN I + R D +D S + E A + + +L Q Sbjct: 146 VPQVAEEYEGLLVNSIEQTSEVQRGDALVTETDSSS--SKEAHAA----LNKWCNDLTQQ 199 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G IDP+IGRE EL + I +L RRR+NNP+LVGE+GVGKTA+ E LA ++ GDVP + Sbjct: 200 ARDGEIDPVIGREAELRQVIDILLRRRQNNPILVGEAGVGKTAVVEALARKLASGDVPPL 259 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASG 298 + + SLD+G + AG RG+FE R K+L+ + Q DT ILF DE HT++GAG +G Sbjct: 260 LQGARLLSLDLGRMQAGASMRGEFESRLKSLIDGISQSDTPVILFCDEAHTLVGAGGQAG 319 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 DA NL+KP+L+ G +R+I +TT+ E+ E D AL RRFQ++ I EP+ V ++ Sbjct: 320 TG-DAVNLLKPMLARGALRMIAATTWSEYKQFIEPDAALTRRFQRVLIGEPNESTAVDML 378 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 + P + HH+V A+ AAV L+++ + R LPDKAI ++D A AR L Sbjct: 379 RAIAPHFAQHHNVTIRDGAIHAAVRLSLRNLPSRQLPDKAISLLDTACARVAL 431 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 109/310 (35%), Positives = 169/310 (54%), Gaps = 12/310 (3%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ I +V++ IP + Q D + + NL RL +FGQ AI+ +++AI++ARAG Sbjct: 535 VDEQSIAAVLSDWTGIPSGKMLQDDIECVLNLEQRLGDHIFGQRNAIKEISQAIRIARAG 594 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAP 537 + + +P+G FL AG TG GKTE L + L L+ F+MSE+ E HT+S L GAP Sbjct: 595 IQSQERPLGIFLLAGSTGTGKTETANVLVETLYGGAHNLITFNMSEFQEAHTLSTLKGAP 654 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ +GG LT+AV + P++V+LLDE +KAH D+ + QV D G + D GR+ FR Sbjct: 655 PGYVGYGKGGKLTEAVRRKPYSVILLDEFDKAHADIQDAFYQVFDKGWMEDAEGRRVSFR 714 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-----EEIKKIFTPEFRNRLDNIIWFDH 652 +++T N G E E+ L D A+ + + + F P R+ NII + Sbjct: 715 QCFILLTCNQGAEEIEQAY--LTANDIKPGALKPLVYDALLRRFAPALLARV-NIIPYIP 771 Query: 653 LSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L D + Q+ + LQ +L D+ G +L + W+A + R + +++ Sbjct: 772 LDQDALAQIASHHLARLQTRLWDEIGATLVTEGDIPGWIASRVCSHPNHGRAVEELLRQT 831 Query: 712 LKKPLANELL 721 L + NE+L Sbjct: 832 LLPAVGNEVL 841 >UniRef50_A8RF26 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RF26_9FIRM Length = 682 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 161/504 (31%), Positives = 261/504 (51%), Gaps = 45/504 (8%) Query: 174 TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 + L L R G ++GR++EL+ + VL R+ K NPLLVGE+GVGKTA+ E LA R ++ Sbjct: 178 SELRNLNRTEGYADIVGRKEELDFMVSVLLRKDKANPLLVGEAGVGKTALVEQLA-RDIR 236 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 + + D IY L++ +L+AGTKYRGDFE++ + +++ L++ ILFIDEIH +IGA Sbjct: 237 YKKIKGLEDTQIYELNLNALVAGTKYRGDFEEKLQKIIRLLQKYPEVILFIDEIHQMIGA 296 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G S G +D A+++KP L+ G IR IG+TT +E+ EKDRAL RRFQ I I EPS+E+ Sbjct: 297 GK-SEGSIDVASVLKPYLARGSIRCIGATTLEEYEKYIEKDRALERRFQIIHIQEPSLEQ 355 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 ++ + +YE+ H V +A+R V YI R PDKAIDV+D A + Sbjct: 356 VYTMLEAKQKEYESFHHVSVCEEALRCIVHYCNCYIPQRKFPDKAIDVLDLACVETK--- 412 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 +++ V+ I+ V+ ++ IP S ++ + + L+ V GQ + L + Sbjct: 413 -KQQQTNVDKIMIQKVIEQLTDIPLVSYNR-----FHYVKEELQKRVIGQSTVVAKLLKQ 466 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRL 533 + G+ + KP+G +LF G VGK V ++ F E +E Sbjct: 467 LAWIEQGVLTD-KPLGVWLFLGNAHVGKEYVIDVFNRCY------FHCEERVE------- 512 Query: 534 IGAPPGYVGFDQGGLLTDAVIK---HPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 I A +G + G L A++K P++++ + + A+ Q G + N Sbjct: 513 INA----IGME--GTLEHALVKLRRKPYSLVQISNLHLANEATLLFFQQAFQKGYIWHGN 566 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 +K D R+ ++++ + + T+ + QD +KK F +D I F Sbjct: 567 -QKVDLRHSIVILQGDFDI--TQENILHFQPQDPYIG----LKKCLGEAFLEVIDEIFLF 619 Query: 651 DHLSTD----VIHQVVDKFIVELQ 670 L + ++ ++V K+ + LQ Sbjct: 620 ADLQVEDKIQIVKEIVRKWNIPLQ 643 >UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M6_ORYSJ Length = 388 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 129/327 (39%), Positives = 195/327 (59%), Gaps = 8/327 (2%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + VV+R IP ++ Q +++ L +L DRL V GQD+A++ + +A+ +RAGL Sbjct: 23 VAQVVSRWTGIPVTTLDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLRSRAGLEQPG 82 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+GSFLF G TGVGKTE+ L++ L L+RFDMSE++ +V RLIGAPP Y G Sbjct: 83 QPIGSFLFLGSTGVGKTELAKALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAPPSYHG 142 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 GG LT+ V P++V+L DE+EKA P VFN+ LQ++D+G LTD GR DF+N +++ Sbjct: 143 HQDGGQLTEKVRTRPYSVILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFKNTIII 202 Query: 603 MTTNAGVRETERKSIGLIHQDNSTD-AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 MT+N G G + + D M++++K F PE NRL I+ F+ LS D + +V Sbjct: 203 MTSNLGAEHLTEGVTGERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHDNLKEV 262 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 V + + + KGVSL S +A + + + Y+ GARP+ R +Q N+ L+ L+ Sbjct: 263 VKIQMKSVVTSVAHKGVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKLSEMLI 322 Query: 722 FGSLVDGGQ-VTVALDKEKNELTYGFQ 747 G D GQ T+++D ++ FQ Sbjct: 323 TG---DAGQGSTISIDATDDKKGLNFQ 346 >UniRef50_A5K1F9 ATP-dependent Clp protease, putative n=1 Tax=Plasmodium vivax RepID=A5K1F9_PLAVI Length = 1222 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 145/423 (34%), Positives = 234/423 (55%), Gaps = 27/423 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS------NPSAREALEACSVDLVALR 55 +Q + L+ A AR + F++V +L+AL++ N L ++ + L+ Sbjct: 300 FSQNCKRVLHNAVLEARRKKKMFVSVTDILIALINMAQESQNCEFLRYLSELNISVNDLK 359 Query: 56 QELEAFIEQTTPVLPASEEERDT---QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAI 112 +EL + E P P R L+ +R QS G E N + Sbjct: 360 RELTGYDEGNCPTPPTGTSHRSNAQRDGDLNANSAEKRGGGDSQS-GTPEKRDDNQRMRS 418 Query: 113 FSEQ---ESQAAYLLRKHEVSRLDVVNFISHGTRK-DEPTQSSDPGSQPNSEEQAGGEER 168 + + E +L+ L H TR+ +SS P PN + Sbjct: 419 LNNRLNNEPPNHHLMNNLNSDYL-------HQTREFKNYEESSFP---PNG--KLFNSAY 466 Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +++ T++ Q A G + GR+KE++R I++L RR+K+NPLL+GESGVGKTAI E L+ Sbjct: 467 VKDCLTDMVQAAYEKGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIIEHLS 526 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 I++ VP + +C IY L++G+++AGTKYRG+FE++ K LL + + +ILFIDEIH Sbjct: 527 HLILKDKVPYHLRNCRIYQLNVGNIVAGTKYRGEFEEKMKHLLSNMNKKKKNILFIDEIH 586 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 I+GAG+ G +DA+NL+KP LSS ++ IG+TT+QE++ E D+AL RRF + + Sbjct: 587 VIVGAGSGE-GSLDASNLLKPFLSSDNLQCIGTTTFQEYTKYIESDKALRRRFNCVPVKP 645 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 + +ET+ ++ +K YE +H++ YT +A+++ V L Y+ + PDKAID++DEAGA Sbjct: 646 FTGKETLLLLKKIKYSYEKYHNIYYTNEALKSIVMLTEDYLPTANFPDKAIDILDEAGAY 705 Query: 409 ARL 411 ++ Sbjct: 706 QKI 708 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 130/207 (62%), Gaps = 2/207 (0%) Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 ++G AR + K V IE++V++ A I ++ + + + L ++L ++ GQ Sbjct: 780 DSGGDARSYLQNMHIKYVTSDVIENIVSKKASISYIKKNKKEEEKIIKLKEKLNKIIIGQ 839 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE--LLRFDM 521 +K I+ L+ + A + +KP+G+ L G +GVGKT +SK L E L+ +M Sbjct: 840 EKVIDILSRYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVISKYLFNEDNLIVINM 899 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM 581 SEY+++H+VS+L G+ PGYVG+ +GG LT++V K P +++L DEIEKAH +V ++LLQ++ Sbjct: 900 SEYIDKHSVSKLFGSYPGYVGYKEGGELTESVKKKPFSIILFDEIEKAHGEVLHVLLQIL 959 Query: 582 DNGTLTDNNGRKADFRNVVLVMTTNAG 608 DNG LTD+ G K F+N + MTTN G Sbjct: 960 DNGMLTDSKGNKVSFKNTFIFMTTNVG 986 >UniRef50_A3K6L5 ATP-dependent Clp protease, ATP-binding subunit ClpB (Fragment) n=1 Tax=Sagittula stellata E-37 RepID=A3K6L5_9RHOB Length = 637 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 120/278 (43%), Positives = 176/278 (63%), Gaps = 10/278 (3%) Query: 433 IARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFL 492 I+ IP + ++Q +R+ L L LK V+GQD A+E L A+ MA AGL KP GSF+ Sbjct: 317 ISGIPAEKLNQDEREKLLTLDQTLKARVYGQDHAVEKLVGAVLMANAGLKEPDKPQGSFM 376 Query: 493 FAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 F GP+GVGKTE+ L+ AL +LRFDMSEYME+H +++LIGAPPGY G++ GG+L Sbjct: 377 FCGPSGVGKTEIAKTLAMALKDNEKAMLRFDMSEYMEKHALAKLIGAPPGYEGYEAGGIL 436 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGV 609 T+AV ++PH+++L DEIEKAHPDVFN+ LQV+D+G LTDN G F N +++MTTN G Sbjct: 437 TNAVRRNPHSIILFDEIEKAHPDVFNVFLQVLDDGRLTDNRGLTVSFANTLILMTTNIG- 495 Query: 610 RETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLD---NIIWFDHLSTDVIHQVVDKFI 666 + + L + M +++ F PEF NR + NII F L ++I ++ ++ + Sbjct: 496 -QAHFLNADLQFAAAMEETMRDLEGTFRPEFLNRFNGRQNIIGFRTLPLELIEKIANREL 554 Query: 667 VELQVQLDQKG--VSLEVSQEARNWLAEKGYDRAMGAR 702 ++ ++ G V++ ++ E + L YD GAR Sbjct: 555 RKVNARIRAAGHAVTIAMAPEQVSALCADRYDPVHGAR 592 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 90/194 (46%), Gaps = 12/194 (6%) Query: 267 FKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 F+ L + L + NS+L ID+ I A A + G N + + +G+ + I ++ Sbjct: 11 FEKLRRTLLRTANSVLLIDDFRDFIEA-ARNNGTTHLINAVMRDVLTGRYQCILEARDED 69 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + + + F ++I EP + +I + AHH V T +A+ AA++L Sbjct: 70 LEIVLKCHSNMREVFTLLEIREPDPDALKEIALVGAGRLTAHHGVPVTEQAIAAAIDLTS 129 Query: 387 KY-IND----RHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSV 441 KY + D R P++ +++ID A R + ++ ++A + + +A I +P+ + Sbjct: 130 KYHVGDLSLSRAQPERTLNLIDRALTSYR---QTVHRRPPHLARLRATLAEIEALPDAAR 186 Query: 442 SQS---DRDTLKNL 452 S RD L+ + Sbjct: 187 SADIVRQRDELQGM 200 >UniRef50_B3XE87 Type VI secretion ATPase, ClpV1 family n=1 Tax=Escherichia coli 101-1 RepID=B3XE87_ECOLX Length = 843 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 147/419 (35%), Positives = 235/419 (56%), Gaps = 36/419 (8%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS------AREALEACSVDLVALRQE 57 + L++++N+A +R RH + + HL+ ++SN A+E L + A+ +E Sbjct: 18 KHLDMAINLAVSR----RHYEVDIIHLIYVIISNDENLIEQLAKETLLNPPSIINAIEKE 73 Query: 58 LEAFIEQ--TTPVLPASEEERDTQPTLSFQRVLQRAVFHVQS--SGRNEVTGANVLVAIF 113 + TPV ++ +SF ++++ H + S + T A ++ Sbjct: 74 FMELPQGDVNTPVF--------SETLVSF---IEKSWLHATTKWSCSSLDTPALFATVLY 122 Query: 114 SEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFT 173 +E+E LL +H L+ ++ + QS + + + +E +T Sbjct: 123 TERE-----LLPEHVSYSLNCQKKVAENILR----QSCEASAITTQDNAFSSNSMLERYT 173 Query: 174 TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 NL+ A G IDP+IGR+ E+ + I +L RRR+NNP+L GE GVGKT I EGLA RI + Sbjct: 174 INLSTSAEEGRIDPVIGRDNEIRKLIDILLRRRQNNPILTGEPGVGKTCIIEGLALRIKE 233 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEIHTIIG 292 G VPE + + + +LD+ +LLAG +G+FE R + +LK++E+ I LFIDE H ++G Sbjct: 234 GKVPETLRNVEVLTLDLTALLAGASAKGEFENRLQHILKEIEKKAKRIVLFIDEAHMLVG 293 Query: 293 AGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIE 352 AG +G Q DAANL+KP L+ G +RVI +TT+ E+ FEKD ALARRFQ I ++EP + Sbjct: 294 AGGLAG-QTDAANLLKPALARGTLRVIAATTWSEYKKYFEKDAALARRFQIIRVSEPDVN 352 Query: 353 ETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 ++ L P + +HH+V T A++AA L+ +YI+ R LPDKA+ ++D A + L Sbjct: 353 AASAMLRALVPAFISHHNVDITEGAIKAATNLSNRYISGRKLPDKAVSLLDTACSHVSL 411 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 167/306 (54%), Gaps = 15/306 (4%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VV+ IP + +++++ K L RL+ + GQD A+ ++ I++ +A L H Sbjct: 512 IADVVSEWTGIPLGTFLETEKEKSKALLSRLQQRIIGQDYALSVISSQIEICQANLHDPH 571 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVG 542 KP G +LFAGP+G+GKTE L++ + L+ +MSE+ E H++S L GAPPGYVG Sbjct: 572 KPTGIYLFAGPSGIGKTETAHALAELVYGGSNNLITINMSEFQEAHSLSGLKGAPPGYVG 631 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 F GG+LT+ V ++P V+LLDEIEKAHPDV + QV D GT+ D G+ +FRN +++ Sbjct: 632 FGHGGILTEGVKRNPFCVILLDEIEKAHPDVIELFYQVFDKGTMEDGEGQLINFRNTLII 691 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKI----FTPEFRNRLDNIIWFDHLSTDVI 658 MT+N ++ + + + ++ + I+ I F F R+ N+I F LS D + Sbjct: 692 MTSNLAA--SQLNDLWISGDKSISNILSVIRPIYDDFFQSAFMGRV-NLIPFLPLSQDSL 748 Query: 659 HQV----VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 ++ ++K + D K + ++ + W+ GAR + ++ N+ Sbjct: 749 KRITKMKIEKICQRVSDATDHK-IIVKYKKSLITWILGNCKYIQSGAREIDMILNHNVLP 807 Query: 715 PLANEL 720 LA + Sbjct: 808 LLAKHI 813 >UniRef50_A1ZYY8 ATP-dependent Clp protease, ATP-binding subunit ClpC, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYY8_9SPHI Length = 1144 Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 158/563 (28%), Positives = 278/563 (49%), Gaps = 30/563 (5%) Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS 247 L G KE ++ + + + +N+ L+VG SG GKTA+ + V+G ++D +++ Sbjct: 201 LFGLTKEYDQLLTTMKAKHRNSVLVVGGSGKGKTALIKEFCR--VKGQ--HGLSDVSVWE 256 Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLI 307 + LL G +E+ + ++L + + IL++ + G G + A+ + Sbjct: 257 VSAAQLLHRLTGLGSWEEYLADVCRELRK-SGDILYVSNFSELFEVGQYVGNNMSMADYL 315 Query: 308 KPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEA 367 + +S G+I +I T +E S I + I+I + S E+ ++I+ Sbjct: 316 RDYISRGEITIISECTPEEASRIEMRSPGYLGLLNTINIEDMSDEQVLEIVTKKVNYIAT 375 Query: 368 HHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIE 427 + +A++ + L Y LP K I + + K KK + + D Sbjct: 376 QKNCAVEEEAIQEILRLQQWYTPYSELPGKTIHFLASIVS-------DKEKKEIKIIDKP 428 Query: 428 SVVARIAR---IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 ++ R + +PE ++ + + + ++GQ++AI +++ + +A + Sbjct: 429 AIFERFCQETGMPEFMINPEIALEVDKMQHYFQTNIYGQNEAIHTVSDLLVAIKAAVVRR 488 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYV 541 KP+ S LF GPTGVGKTE+ L++ + +++RFDMSEY + + RL G Sbjct: 489 GKPLASLLFVGPTGVGKTEMAKVLAQFMFGNRNKMIRFDMSEYTDTRAIMRLTGD----- 543 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G GLLT ++ + P +VLL DE+EK HP +++LLQ++ G LTD GR ADF + ++ Sbjct: 544 GTSGEGLLTSSIRQDPFSVLLFDELEKVHPSFYDLLLQILGEGRLTDARGRVADFCSTII 603 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAM-----EEIKKIFTPEFRNRLDNIIWFDHLSTD 656 +MT+N G R + SIG + N +A E++ F PE NRLD +I F L Sbjct: 604 IMTSNIGARSFQTGSIGFVETKNEAEAAAAHFKSEVQAYFRPELFNRLDRVIAFAPLDKP 663 Query: 657 VIHQVVDKFIVELQVQLDQKGVSLEVS--QEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 ++ +++D+ I ++ + KG +LEV+ Q ++L +KGY+ GAR + R +Q L Sbjct: 664 IVRKIIDREIDLVKKREGIKGRNLEVNIGQNVLDYLGKKGYNANYGARFLQRTLQTQLIV 723 Query: 715 PLANELLFGSLVDGGQVTVALDK 737 PL+ L + QV V L K Sbjct: 724 PLSQALNEYDFLQPLQVDVFLKK 746 >UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ClpB n=5 Tax=Proteobacteria RepID=Q2T6Y8_BURTA Length = 958 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 163/446 (36%), Positives = 230/446 (51%), Gaps = 32/446 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL--EACSVDLVALRQELE 59 LN +L A RH+ + VEHLL L PSA AL A D LR++ + Sbjct: 13 LNPYCRTALENAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRASGADAARLRRQAD 72 Query: 60 AFIEQTTPVLPASEEERDT-QPTLS--FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQ 116 A ++ PA R P+L Q A + + VA + Q Sbjct: 73 AALDAR----PAGGGGRPAFAPSLLALLQDAWLIASLELGETQIRSAAVLAAAVARAARQ 128 Query: 117 ESQAA-----YLLRKHEVSRL-----DVVNFISHGTRKDEPTQSSD-PGSQPNSEEQAGG 165 S+ L R V+R + G R P ++D PG+ S A Sbjct: 129 PSRGGDDMLQSLRRDALVARFAHACAQSIESRGPGARDAAPGDANDTPGAHDASSAIA-- 186 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 E+FT AR G IDP+ GR+ ++ + + +L RRRKNNP+ VGE GVGKTA+ E Sbjct: 187 -RYCEDFTAK----ARAGRIDPVFGRDAQIRQIVDILARRRKNNPVCVGEPGVGKTAVVE 241 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFI 284 GLA RI +GDVP + T+ LD+G L AG +G+FE+R K ++ ++ +LF+ Sbjct: 242 GLALRIAEGDVPAALRHATLLGLDLGLLQAGASVKGEFEQRLKRVIAEIHASQAPVVLFV 301 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DE HT+IGAG +G DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ + Sbjct: 302 DEAHTLIGAGGPAGAS-DAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPV 360 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + P + +V I+ GLK +Y+ H V A+ AA EL+ +YI R LPDKAID++D Sbjct: 361 KLDSPDVATSVMILRGLKERYQDAHGVTIRDDALVAAAELSERYITGRQLPDKAIDLLDT 420 Query: 405 AGARARLMPVSKRKKTVNVADIESVV 430 A AR + V ++ K + D E + Sbjct: 421 ACARVK---VRQQTKPAALEDAERAI 443 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 88/186 (47%), Positives = 124/186 (66%), Gaps = 3/186 (1%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VVA I + + + + L D LK + GQD AIE ++EA+K AG+ Sbjct: 580 IADVVADWTGIAAGKLRRDRANVMLRLADTLKGRIRGQDHAIEQISEAVKAGAAGVHDPR 639 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+G FL AGP+G GKTE + ++ AL G E ++ +MSE+ ERH VSRLIG+PPGYVG Sbjct: 640 RPLGVFLLAGPSGTGKTETALAVADALFGDERSIVVVNMSEFQERHDVSRLIGSPPGYVG 699 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + +GG+LT+AV + P++V+LLDE+EKAHPDV N+ QV D G+L D G++ DF N V+ Sbjct: 700 YGEGGMLTEAVRQRPYSVVLLDEVEKAHPDVLNLFYQVFDKGSLCDGEGKEVDFANTVIF 759 Query: 603 MTTNAG 608 +T+N G Sbjct: 760 LTSNLG 765 >UniRef50_Q8SQU0 HSP 101 RELATED PROTEIN n=2 Tax=Apansporoblastina RepID=Q8SQU0_ENCCU Length = 851 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 141/418 (33%), Positives = 227/418 (54%), Gaps = 33/418 (7%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLV--ALRQELEAFIEQ 64 +L M A + + + EHLL A+LS+ ++ L + V AL + + F +Q Sbjct: 13 ALKMCVDEALANNNNTIEPEHLLKAILSDQTSVLHNVLSPTERNNVKNALIKRIGGFAKQ 72 Query: 65 TTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLL 124 P E L + + +S G E N LV E ES + Sbjct: 73 YNCTEPRVGE------------TLAKVLMAAESKGEGEYVSVNALVLSLLEVESIRELIA 120 Query: 125 RKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGG 184 ++ + + +E T++ + +S G + M F ++ + AR Sbjct: 121 NSEDIRK-----------KVEEQTKNK----RFDSRNADDGTDVMSRFAVDMVEQARQNV 165 Query: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCT 244 DP+IGR++E+ R +++L ++ K+N +LVG+ GVGKTAI G+A I G+ P + Sbjct: 166 FDPVIGRDEEIRRVLEILSKKTKSNAILVGKPGVGKTAIVNGIAQLIANGEAP-TLRGAR 224 Query: 245 IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA 304 IY++D+GS++AGT +RGDFE+R K L+K+ E ILFIDEIH ++GAG G +DAA Sbjct: 225 IYNVDVGSMVAGTSHRGDFEERLKTLVKEAETTPGVILFIDEIHIVLGAGKTDGA-MDAA 283 Query: 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPK 364 N++KP L++G I+ IG+TT+ E+ E D A RRF ++ + EPSIE+++ ++ GLK + Sbjct: 284 NMLKPGLAAGTIKCIGATTHDEYRKYIENDPAFERRFVQVVVNEPSIEDSITMLRGLKGR 343 Query: 365 YEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 EA+H V+ A+ AV + KYI++R LPD AID++D A A + S+ ++ +N Sbjct: 344 LEAYHGVKIADSAIVYAVNSSKKYISNRRLPDVAIDLLDTACASVMIALESEPQEILN 401 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/304 (35%), Positives = 178/304 (58%), Gaps = 12/304 (3%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + +++R I K ++ + + L + R+K +FGQD A++A+ ++I +R GL + Sbjct: 520 VAEIISRWTGIDVKRLTIKENERLMEMSSRIKKRIFGQDHAVDAIVDSILQSRVGLDDDD 579 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIEL-------LRFDMSEYMERHTVSRLIGAPP 538 +PVGSFL GPTGVGKTE L+KA+ +EL L DMSEY +++LIGA Sbjct: 580 RPVGSFLLLGPTGVGKTE----LAKAVAMELFDNEKDMLVIDMSEYGNEMGITKLIGANA 635 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG++QGG LT+ + P+ V+LLDE++ AH V N L Q++D G +TD G DFRN Sbjct: 636 GYVGYNQGGTLTEPIKGRPYNVILLDEVDLAHQTVLNTLYQLLDEGRVTDGKGAVVDFRN 695 Query: 599 VVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 V++MT+N G +E +S G ++ D E + F F NR+D +++F++L + + Sbjct: 696 CVVIMTSNLG-QEIIMRSRGELNDDERKKIEEIVLNRFGAPFVNRIDEVLYFNNLDRENM 754 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 H++++ + L+ +L +G++ +VS + + K GAR + R I+ + K+ L Sbjct: 755 HRILEYQMGYLEKKLRGRGITFKVSDAVKEDMVTKVLSSIYGARQLRRFIRSSFKRALTK 814 Query: 719 ELLF 722 LL Sbjct: 815 VLLM 818 >UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subunit n=63 Tax=Bacteria RepID=Q2SEG4_HAHCH Length = 919 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 147/424 (34%), Positives = 225/424 (53%), Gaps = 38/424 (8%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEAFIEQTT 66 SL A++ RH + +EH+LL +L S+ LE VD+ + +EL + + Sbjct: 20 SLEDGLRLAQQERHSSLEIEHVLLKVLEQSDSDLDRVLEQLGVDIGKVSRELSQTVGKFH 79 Query: 67 PVLPASEEERDTQPTLSFQRVLQRAVFHVQS--SGRNEVTGANVLVAIFSEQESQAAYLL 124 P RD P +A + + S G N ++ A++ A+ S + Sbjct: 80 RDNP-----RDMVPFSPLVVDALKAGWLLASVEMGVNFISSAHLFAAVMSHNT------M 128 Query: 125 RKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE----------------EQAGGEER 168 R +S + + IS K P + G S Q G Sbjct: 129 RNQLLSSVKTLQEIS--LEKVLPAVKAVTGQSSESRAYLKAAAGGGAPAAPTAQGGA--- 183 Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ +T NL + A IDP++GR+ E+ + I +L RRR+NNP+L GE+GVGKTA+ EGLA Sbjct: 184 LQKYTVNLTERALNNEIDPVLGRDPEIRQCIDILTRRRQNNPILTGEAGVGKTAVVEGLA 243 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEI 287 RI Q DVPE + I+ LD+G L AG +G+FE+R K+++++++ I+FIDE Sbjct: 244 LRIAQKDVPEPLQGVHIHVLDLGLLQAGASMKGEFEQRLKSVIEEVKASPAPIIMFIDEA 303 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT+IGAG GQ DAANL+KP L+ G++R I +TT+ E+ FE+D AL RRFQ + + Sbjct: 304 HTMIGAGGKE-GQGDAANLLKPALARGELRTIAATTWAEYKKYFERDPALTRRFQVVKVE 362 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EP+ + ++ G+ HH+VR + A+ AV+L+ +YI R LPDK + ++D A A Sbjct: 363 EPTEAVAIDMLRGISKILAIHHNVRISDDAIIQAVKLSARYIPGRQLPDKGVSLLDTACA 422 Query: 408 RARL 411 R L Sbjct: 423 RVSL 426 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 94/232 (40%), Positives = 141/232 (60%), Gaps = 7/232 (3%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + VVA IP + + + + NL ++L+ V GQ A+EA+ +AI+ +RAGL Sbjct: 559 VAEVVANWTGIPVGKMVSDEINGILNLHEQLEKRVIGQSHALEAIAQAIRTSRAGLTDPR 618 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVG 542 KP+G FL GP+GVGKTE + L+ L G E L +M+E+ E H VS L+G+PPGYVG Sbjct: 619 KPIGVFLMVGPSGVGKTETALALADTLFGGEQNLTVINMAEFKEEHKVSMLLGSPPGYVG 678 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + +GG+LT+A + P++V+LLDE+EKAH V ++ + D G++ D GR DF+N V++ Sbjct: 679 YGEGGVLTEAARRKPYSVILLDEMEKAHQGVQDVFYNLFDKGSIKDGEGRDIDFKNTVII 738 Query: 603 MTTNAG---VRETERKSIGLIHQDNSTDAM-EEIKKIFTPEFRNRLDNIIWF 650 MT+NAG +R +S D D+M E+ K F P F R + I ++ Sbjct: 739 MTSNAGEEAIRAICAQSEEKPEPDVMLDSMRHELLKYFKPAFLGRANVITYY 790 >UniRef50_Q8NPQ1 ATPases with chaperone activity, ATP-binding subunit n=1 Tax=Corynebacterium glutamicum RepID=Q8NPQ1_CORGL Length = 655 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 184/606 (30%), Positives = 299/606 (49%), Gaps = 68/606 (11%) Query: 153 PGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLL 212 PG QP + E R +LN+ R +P + R+ +++ + +L + K N LL Sbjct: 67 PG-QPQQQSAPNDETRF----IDLNE--RHKDDEPALFRDDVIDQTLAILISKNKPNALL 119 Query: 213 VGESGVGKTAIAEGLAWRIVQGDV--PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 VG +G GK+ IAE +A R+ DV P+ + I + I L+AG G E+R L Sbjct: 120 VGPAGTGKSRIAEDIARRLANDDVSIPDQLVGHRILDVSIAELVAGAGVVGQLEERILDL 179 Query: 271 LKQLEQDTNS-ILFIDEIHTIIGAGAA-SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFS 328 +K +N I+FIDEIH I G ++ SG Q A ++KP L+ G +RVIG+TT QE Sbjct: 180 IKYATDPSNKVIIFIDEIHQIAGDQSSHSGSQAKVAQILKPYLARGDLRVIGATTTQEAR 239 Query: 329 NIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT-AKAVRAAVELAVK 387 + F+ D AL RRF ++++ E ++T+ I++ + Y H + T + V V + Sbjct: 240 D-FDHDPALKRRFSRVNVDEFDRDQTLTILHAARDGYLKHFNNAVTVSDDVLGYVYTYSQ 298 Query: 388 YINDRHL--PDKAIDVIDEAGA-----RARLM-----------PVSKRKKTVNVADIESV 429 N + PD A+ + D+A A + RL+ PVS+R ++ + Sbjct: 299 QFNPGNTAQPDAALTLFDKALASLTMEKQRLINNHVIAPSLKFPVSER----HIHNTARK 354 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 +A +++P + RD L+ L FGQD IE + AIK + G+ KP+ Sbjct: 355 LAFGSQVPASINTDDARDKLETL--------FGQDHIIEPVLTAIKREQLGIFPRTKPL- 405 Query: 490 SFLFAGPTGVGKTEVTVQLSKAL-GIELLRFDMSEYMERHTVSRLIGAPPGYVGFD-QGG 547 S++FAG +GVGKTE+ LS+A+ G + + + EY+ +++ LIG+ GY+G + + Sbjct: 406 SWVFAGSSGVGKTEMARILSRAINGGDPIIINGPEYISPESITGLIGSSDGYIGSNSKRA 465 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 607 D +I +P V++LDE EK+HP + + +D GT+ NG +F +++ TTNA Sbjct: 466 KPLDPLISNPRQVIVLDEFEKSHPHFQQLFMAALDTGTMAMANGTTLNFSQAIIIATTNA 525 Query: 608 GVRETERKSIGLIHQDNS---------TD--AMEEIKKIFTPEFR----NRLDNIIWFDH 652 + R S G DNS TD A E +K + + +F NR NI F+ Sbjct: 526 ARDKIGRDSFGF-DSDNSGVLGSAQAATDPRAQERLKSLMSKDFPVELLNRFQNIFAFNR 584 Query: 653 LSTDVIHQVVDKFI------VELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 + +++D V L + ++ + + L E + GARP AR Sbjct: 585 IDAGTYREILDNLYQRRRDAVLLSHPHYAAQIPADIDSDTLDQLVETTFISDFGARPAAR 644 Query: 707 VIQDNL 712 I+D++ Sbjct: 645 TIEDHI 650 >UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=Bacteria RepID=A9BLL0_DELAS Length = 928 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 136/330 (41%), Positives = 195/330 (59%), Gaps = 18/330 (5%) Query: 153 PGSQPNSEEQAGGEE-RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPL 211 PG + A G+ ++ +T +L A+ G +DP+ GR+ E+ + + +L RRR+NNP+ Sbjct: 189 PGEASQATGAAPGQGGALQQYTVDLTARAKAGELDPVTGRDDEVRQMVDILLRRRQNNPI 248 Query: 212 LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALL 271 LVGE+GVGKTA+ EGLA RI QGDVP + + LD+G L AG +G+FE R + LL Sbjct: 249 LVGEAGVGKTAVVEGLALRIAQGDVPPPLQGVELRVLDVGLLQAGASMKGEFENRLRGLL 308 Query: 272 KQLEQDTNSI-LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNI 330 ++ T I LFIDE+HT++GAG +G DAANL+KP L+ G +R IG+TT+ E+ Sbjct: 309 DAVQSSTTPIVLFIDEVHTLVGAGGQAGTG-DAANLLKPALARGTLRTIGATTWAEYKKY 367 Query: 331 FEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYIN 390 EKD AL RRFQ + + EP V ++ G+ K E HH VR A AV AAV L+ +YI Sbjct: 368 IEKDPALTRRFQLVQVHEPDEPRAVDMLRGVAAKLENHHQVRIAADAVAAAVSLSHRYIP 427 Query: 391 DRHLPDKAIDVIDEAGAR---------ARLMPVSKRKKTVNVADIESVVARIAR--IPEK 439 R LPDKA+ ++D A +R A+L V +R + + V + V+ R A +P Sbjct: 428 SRQLPDKAVSLLDTACSRVAMALHATPAQLEAVQRRIEALGVE--QEVLLREAALGLPTA 485 Query: 440 SVSQSDRDTLKNLGDRLKMLV--FGQDKAI 467 Q+ L +L +R L FGQ+ A+ Sbjct: 486 ERLQALETDLASLRERQATLAERFGQESAL 515 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 165/294 (56%), Gaps = 9/294 (3%) Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 IP + + + ++ +L D L+ V GQ +EA+T I+ +RA L KP+G FL AG Sbjct: 603 IPVGRMVRDEVQSVLSLADTLEKRVIGQRHGLEAITRRIQTSRARLDDPGKPIGVFLLAG 662 Query: 496 PTGVGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 P+GVGKTE + L++AL G E L+ +MSE+ E HTVS L GAPPGYVG+ +GG+LT+A Sbjct: 663 PSGVGKTETALSLAEALYGGEQNLITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEA 722 Query: 553 VIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG---- 608 V + P++V+LLDEIEKAH DV + QV D G + D GR DF+N V+++T+N G Sbjct: 723 VRRRPYSVVLLDEIEKAHSDVHEMFFQVFDKGWMEDGEGRYIDFKNTVIILTSNVGSDLI 782 Query: 609 VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVE 668 + + + + + + F RL + ++ +S ++ Q++ ++ Sbjct: 783 ANMCRDPDLAPTPEGLAQAVRQPLLQTFPAALLGRLTVVPYYP-ISDAMLEQIIRLQMLR 841 Query: 669 LQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 +Q +++++ G + A + + + + GAR + ++ NL +A L Sbjct: 842 IQRRIEERHGAQFSFDEAAVDLVRRRCSEVESGARMVDGILTQNLLPRMATHFL 895 >UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=D2QJP1_9SPHI Length = 828 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 121/327 (37%), Positives = 193/327 (59%), Gaps = 4/327 (1%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V D+ +VVA IP V +++ L ++ L+ V GQ+ A+ AL++AI +R+G Sbjct: 500 VTANDLVAVVAHKTGIPMGKVQGQEKERLLSMESFLQRRVVGQNHALRALSDAILESRSG 559 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAP 537 L +P+GSF GPTG GKTE++ L+ L + L+RFDMSE+ E H+ + L GAP Sbjct: 560 LQRAGQPIGSFFLLGPTGTGKTELSKSLADFLFNDERALIRFDMSEFKEEHSAALLYGAP 619 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GGLL + + K P++V+L DEIEKAH VF++ LQ+MD G L D G++ DF Sbjct: 620 PGYVGYEEGGLLVNKIRKQPYSVVLFDEIEKAHGSVFDVFLQIMDEGRLHDKLGKEGDFT 679 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDV 657 N +L+ T+N E S M + F PEF R+ II F + + Sbjct: 680 NALLIFTSNIS-SEWITNEFQAGRMPTSQQLMTRMTGQFRPEFLARITEIIPFSPIQEEN 738 Query: 658 IHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 + ++ + + LQ L Q+GV+L +++EA LA +G+ GARP+A +I++ L++P++ Sbjct: 739 VVRIFEIQLAHLQKSLVQQGVTLTLTKEANRQLALQGFSPHYGARPLAGIIRNQLRRPIS 798 Query: 718 NELLFGSLVDGGQVTVALDKEKNELTY 744 L+ G L G + + +++ +EL + Sbjct: 799 RLLISGQLQKGQSLNLDWNEQTSELIW 825 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 143/415 (34%), Positives = 231/415 (55%), Gaps = 14/415 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL-EACSVDLVALRQELEA 60 L + +E +L++A A ARE+ +E +T HLL A+L + AL A D+ + + Sbjct: 6 LTEPVEKALHIARALAREYHNEQLTAAHLLRAVLHDDVGGSALLRALDQDVAYIFDWADV 65 Query: 61 FIE-QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 +IE Q L +E +D S +RVL A F G + V VL A+ Sbjct: 66 WIEEQPRSALAITEPLQDE----SVERVLNEADFFRVKLGLDYVELICVLTALTKPGVGF 121 Query: 120 AAYLLRKHEVSRLDVVN-FISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 A LR + D+++ F+ + P + S N + G + F +++ Sbjct: 122 TAEQLRSFPLQERDLLDRFLRDLS---TPRATDKTSSNGNGQAALPGLKTKGQFPYCIDK 178 Query: 179 LA--RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 A R +DP++GR++E+ +++L RR K N ++VG+ GVGK+A+ +GLA IV+G V Sbjct: 179 TAQARAKKLDPVVGRKQEVRTMLEILGRRSKPNVMVVGDPGVGKSALLDGLAQLIVEGQV 238 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA 296 P M + + LD G+LLAG Y+G+ E R K++LK++ Q ILFIDEIHT++ + Sbjct: 239 PARMKNAILLELDSGALLAGASYKGEVEDRLKSVLKEVRQQEMCILFIDEIHTLLDPKGS 298 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 +G + ANL+KP L+ G++ V+G+TT +E+ + E D+AL+RRF+ +++TEP+ + + Sbjct: 299 AGNGI--ANLLKPELARGELTVVGATTLEEYRKLIEPDQALSRRFELLNVTEPTEQVAER 356 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 +I GL P YE HH + V A + LA +Y +R LPD A+D++D A R+ Sbjct: 357 MIRGLIPVYEQHHKLEIQPDVVAACIRLARRYSKERRLPDSALDLLDRTMAAIRI 411 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organism... 826 0.0 UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ... 800 0.0 UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ... 787 0.0 UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit ... 785 0.0 UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 T... 776 0.0 UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY 765 0.0 UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomyceta... 760 0.0 UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n... 760 0.0 UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ... 758 0.0 UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit ... 758 0.0 UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ... 756 0.0 UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit C... 756 0.0 UniRef50_D1Y107 Negative regulator of genetic competence ClpC/Me... 750 0.0 UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular or... 748 0.0 UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n... 743 0.0 UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit c... 738 0.0 UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collins... 734 0.0 UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacte... 734 0.0 UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 731 0.0 UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=... 730 0.0 UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogace... 729 0.0 UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogace... 727 0.0 UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit c... 724 0.0 UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteri... 724 0.0 UniRef50_P37571 Negative regulator of genetic competence clpC/me... 722 0.0 UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ... 721 0.0 UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Sacchar... 721 0.0 UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=V... 721 0.0 UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 718 0.0 UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/Dna... 716 0.0 UniRef50_C7HWH6 Negative regulator of genetic competence MecB/cl... 715 0.0 UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicoba... 714 0.0 UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mami... 713 0.0 UniRef50_C9KP02 Negative regulator of genetic competence ClpC/Me... 713 0.0 UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ... 709 0.0 UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Tr... 708 0.0 UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit c... 705 0.0 UniRef50_C9PUC6 ATP-dependent Clp protease subunit n=1 Tax=Prevo... 702 0.0 UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum Rep... 702 0.0 UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/me... 699 0.0 UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiale... 697 0.0 UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 ... 693 0.0 UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ... 690 0.0 UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecali... 689 0.0 UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/Dna... 687 0.0 UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit c... 687 0.0 UniRef50_D1PH53 ATP-dependent Clp protease, ATP-binding subunit ... 685 0.0 UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subu... 681 0.0 UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/Me... 679 0.0 UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Tr... 679 0.0 UniRef50_A4W448 ATPases with chaperone activity, ATP-binding sub... 678 0.0 UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit C... 677 0.0 UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HL... 676 0.0 UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ... 675 0.0 UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding s... 675 0.0 UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD 674 0.0 UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subu... 672 0.0 UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/Me... 672 0.0 UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 671 0.0 UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae... 671 0.0 UniRef50_Q9ZN31 ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT n=17 ... 671 0.0 UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosipho... 668 0.0 UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding ... 667 0.0 UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular or... 665 0.0 UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding sub... 664 0.0 UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/Me... 664 0.0 UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bactero... 662 0.0 UniRef50_A7I2C9 ATP-dependent CLP protease ATP-binding subunit n... 655 0.0 UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain,... 654 0.0 UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subu... 654 0.0 UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma ... 653 0.0 UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding ... 653 0.0 UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ... 652 0.0 UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Per... 651 0.0 UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,... 650 0.0 UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=... 650 0.0 UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit c... 650 0.0 UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Can... 650 0.0 UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71... 649 0.0 UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria Rep... 648 0.0 UniRef50_A0RNV1 ATP-dependent Clp protease ATP-binding subunit C... 647 0.0 UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit c... 647 0.0 UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax... 647 0.0 UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma ... 645 0.0 UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens ... 642 0.0 UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiale... 641 0.0 UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subu... 640 0.0 UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 639 0.0 UniRef50_C8PIY8 ATP-dependent CLP protease ATP-binding subunit n... 634 e-180 UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=C... 632 e-179 UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Rumin... 627 e-178 UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR 625 e-177 UniRef50_A5UYN2 ATPase AAA-2 domain protein n=1 Tax=Roseiflexus ... 617 e-175 UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ... 606 e-171 UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japo... 606 e-171 UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit c... 602 e-170 UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma ... 602 e-170 UniRef50_D1Z247 ATP-dependent Clp protease ATP-binding subunit C... 598 e-169 UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Ples... 593 e-168 UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit c... 584 e-165 UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conex... 581 e-164 UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides ... 580 e-164 UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, s... 580 e-164 UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacteri... 574 e-162 UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bige... 563 e-158 UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n... 562 e-158 UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza s... 561 e-158 UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus Re... 560 e-158 UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1... 558 e-157 UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas Re... 558 e-157 UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Ta... 547 e-154 UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii... 540 e-151 UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomo... 535 e-150 UniRef50_Q7RAR9 ATP-dependent Clp protease, ATPase subunit-relat... 532 e-149 UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular or... 529 e-148 UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga... 522 e-146 UniRef50_Q0SNE4 ATP-dependent Clp protease, subunit A n=22 Tax=B... 513 e-144 UniRef50_C2EIG8 ATP-dependent Clp protease n=4 Tax=Lactobacillal... 512 e-143 UniRef50_C3RJA5 ATPase n=3 Tax=Bacteria RepID=C3RJA5_9MOLU 508 e-142 UniRef50_B5RQH1 ATP-dependent Clp protease, subunit C n=24 Tax=B... 503 e-140 UniRef50_A3CKB2 ATPase with chaperone activity, ATP-binding subu... 503 e-140 UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two... 499 e-139 UniRef50_C0SQM4 Putative ATP-dependent Clp protease n=1 Tax=Lact... 497 e-139 UniRef50_Q1WR72 ATP-dependent Clp protease n=2 Tax=Lactobacillus... 488 e-136 UniRef50_B5RLQ8 ATP-dependent Clp protease, subunit A n=1 Tax=Bo... 485 e-135 UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F... 476 e-132 UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 462 e-128 UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococc... 462 e-128 UniRef50_A5FES3 ATPase AAA-2 domain protein n=1 Tax=Flavobacteri... 462 e-128 UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/Me... 459 e-127 UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit C... 446 e-123 UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 ... 445 e-123 UniRef50_Q7NHQ2 ATP-dependent protease ATP-binding subunit n=1 T... 442 e-122 UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n... 442 e-122 UniRef50_A6EIG8 Putative ATP-dependent protease n=1 Tax=Pedobact... 439 e-121 UniRef50_UPI00016B2080 clp protease ATP binding subunit n=4 Tax=... 439 e-121 UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepI... 434 e-120 UniRef50_B9Y438 Putative uncharacterized protein n=1 Tax=Holdema... 428 e-118 UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atr... 427 e-118 UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms... 426 e-117 UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA 426 e-117 UniRef50_A6GDL3 ClpA/B family protein n=1 Tax=Plesiocystis pacif... 423 e-116 UniRef50_Q1D2Y8 ClpA/B family protein n=1 Tax=Myxococcus xanthus... 422 e-116 UniRef50_UPI00016C3DF7 ATPase with chaperone activity, ATP-bindi... 421 e-116 UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organis... 420 e-115 UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidob... 419 e-115 UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular orga... 418 e-115 UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organis... 417 e-115 UniRef50_Q7YN63 Clp protease ATP-binding subunit n=5 Tax=Apicomp... 414 e-114 UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. S... 412 e-113 UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms Rep... 410 e-112 UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=C... 409 e-112 UniRef50_A8RF26 Putative uncharacterized protein n=1 Tax=Eubacte... 409 e-112 UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales Re... 408 e-112 UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subu... 406 e-111 UniRef50_B3LAU4 ATP-dependent Clp protease, putative n=1 Tax=Pla... 404 e-111 UniRef50_UPI0001744445 ClpA/B family protein n=1 Tax=Verrucomicr... 404 e-111 UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=... 404 e-110 UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 T... 404 e-110 UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces svic... 404 e-110 UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CL... 403 e-110 UniRef50_A1ZTB7 Chaperone ClpB, putative n=1 Tax=Microscilla mar... 403 e-110 UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q... 401 e-110 UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria Rep... 399 e-109 UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 T... 398 e-109 UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=C... 397 e-109 UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellu... 397 e-109 UniRef50_A1ZCV4 ATPases with chaperone activity ClpC, two ATP-bi... 396 e-108 UniRef50_Q1D2Y7 ClpA/B family protein n=1 Tax=Myxococcus xanthus... 395 e-108 UniRef50_A9GQS7 ATP-dependent Clp protease, ATP-binding subunit ... 395 e-108 UniRef50_Q03X61 ATP-binding subunit of Clp protease and DnaK/Dna... 394 e-108 UniRef50_Q9MTD7 Clp n=136 Tax=Apicomplexa RepID=Q9MTD7_TOXGO 394 e-108 UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organism... 393 e-107 UniRef50_A1ZYY8 ATP-dependent Clp protease, ATP-binding subunit ... 392 e-107 UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=P... 392 e-107 UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organis... 390 e-107 UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatro... 390 e-106 UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=... 388 e-106 UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organ... 387 e-106 UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria R... 387 e-105 UniRef50_UPI00016C3DF6 ATPase with chaperone activity, ATP-bindi... 387 e-105 UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba d... 386 e-105 UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI 385 e-105 UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candida... 385 e-105 UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subu... 384 e-105 UniRef50_UPI00016C3DF8 ATPase with chaperone activity, ATP-bindi... 384 e-105 UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 384 e-105 UniRef50_UPI0001744446 ATPase with chaperone activity, ATP-bindi... 382 e-104 UniRef50_UPI0001746BB9 ATPase with chaperone activity, ATP-bindi... 381 e-104 UniRef50_A9AVM3 ATPase AAA-2 domain protein n=1 Tax=Herpetosipho... 381 e-104 UniRef50_Q2SB13 ATPase with chaperone activity, ATP-binding subu... 380 e-104 UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malasse... 380 e-103 UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterob... 380 e-103 UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi... 380 e-103 UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp... 380 e-103 UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 R... 379 e-103 UniRef50_A6GDL5 ClpA/B family protein n=1 Tax=Plesiocystis pacif... 379 e-103 UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria... 377 e-103 UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 ... 377 e-102 UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular org... 377 e-102 UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCM... 376 e-102 UniRef50_A9ERV8 ATP-dependent Clp protease, ATP-binding subunit,... 375 e-102 UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=S... 375 e-102 UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 Rep... 374 e-101 UniRef50_A6GDL2 ClpA/B family protein n=1 Tax=Plesiocystis pacif... 373 e-101 UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subu... 372 e-101 UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Pro... 371 e-101 UniRef50_Q1D2Y9 ClpB family protein n=1 Tax=Myxococcus xanthus D... 370 e-100 UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium... 370 e-100 UniRef50_Q1DC82 ClpA/B family protein n=2 Tax=Cystobacterineae R... 370 e-100 UniRef50_Q8NPQ1 ATPases with chaperone activity, ATP-binding sub... 370 e-100 UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=... 369 e-100 UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=... 369 e-100 UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter ... 369 e-100 UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteo... 367 e-100 UniRef50_A6G5U6 AAA ATPase n=1 Tax=Plesiocystis pacifica SIR-1 R... 365 2e-99 UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mut... 365 3e-99 UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=... 365 4e-99 UniRef50_Q2SB15 ATPase with chaperone activity, ATP-binding subu... 364 1e-98 UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ... 363 2e-98 UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B... 362 2e-98 UniRef50_C6HYE9 ATPase AAA-2 domain protein n=1 Tax=Leptospirill... 362 3e-98 UniRef50_Q2SB14 ATPase with chaperone activity, ATP-binding subu... 361 5e-98 UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=G... 361 6e-98 UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escheri... 361 6e-98 UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ... 360 8e-98 UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding sub... 360 1e-97 UniRef50_C7RF24 ATPase AAA-2 domain protein n=1 Tax=Anaerococcus... 360 1e-97 UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN 360 2e-97 UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=... 359 2e-97 UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q... 359 3e-97 UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostr... 359 4e-97 UniRef50_A9GQT0 ATPase with chaperone activity, two ATP-bindingd... 358 4e-97 UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus ... 358 6e-97 UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria ... 357 1e-96 UniRef50_D2KTB1 BC18 (Fragment) n=1 Tax=Babesia caballi RepID=D2... 356 2e-96 UniRef50_B1GUR2 ATP-dependent Clp protease-like protein n=1 Tax=... 356 2e-96 UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmod... 354 8e-96 UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organ... 354 1e-95 UniRef50_Q4FY62 Serine peptidase, putative n=12 Tax=cellular org... 353 2e-95 UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_E... 353 2e-95 UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding sub... 352 3e-95 UniRef50_B3QUJ2 ATPase AAA-2 domain protein n=1 Tax=Chloroherpet... 351 7e-95 UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M... 351 7e-95 UniRef50_Q98IM7 Probable ClpA/B-type protease n=6 Tax=Rhizobiale... 350 8e-95 UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=... 350 1e-94 UniRef50_Q8SQU0 HSP 101 RELATED PROTEIN n=2 Tax=Apansporoblastin... 350 1e-94 UniRef50_B3EPU4 ATPase AAA-2 domain protein n=4 Tax=Chlorobiacea... 350 1e-94 UniRef50_B9K2G7 ATP-dependent Clp protease ATP-binding subunit n... 350 2e-94 UniRef50_UPI000194EB59 PREDICTED: hypothetical protein, partial ... 347 9e-94 Sequences not found previously or not previously below threshold: >UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organisms RepID=CLPA_RHOBL Length = 793 Score = 826 bits (2134), Expect = 0.0, Method: Composition-based stats. Identities = 442/759 (58%), Positives = 568/759 (74%), Gaps = 9/759 (1%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + LE +++ A A A RHE T+EHLLLAL+ P A ++ACSVDL L++ L F Sbjct: 25 FSSTLEQAIHAALALANARRHELATLEHLLLALIDEPDAARVMKACSVDLEDLKKTLTDF 84 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 I+ L S E + PT +FQRV+QRA HVQSSGR EVTGANVLVAIF+E+ES AA Sbjct: 85 IDDDLSTLVTSVEGSEAVPTAAFQRVIQRAAIHVQSSGRTEVTGANVLVAIFAERESNAA 144 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSS-------DPGSQPNSEEQAGGEERMENFTT 174 Y L++ +++R D VNFI+HG KD S +P P +E E + + Sbjct: 145 YFLQEQDMTRYDAVNFIAHGVAKDPSYGESRPVQGADEPQETPKAEAGEAKESALSKYCV 204 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +LN AR G +DPLIGRE E+ERAIQVLCRRRKNNPLLVG+ GVGKTAIAEGLAW+I++ Sbjct: 205 DLNIKARKGDVDPLIGREAEVERAIQVLCRRRKNNPLLVGDPGVGKTAIAEGLAWKIIKK 264 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 +VPEV++ TI+SLD+G+LLAGT+YRGDFE+R KA++K+LE ++ILFIDEIHT+IGAG Sbjct: 265 EVPEVLSGATIFSLDMGALLAGTRYRGDFEERLKAVVKELEDHPDAILFIDEIHTVIGAG 324 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 A SGG +DA+NL+KP L GK+R +GSTTY+EF FEKDRAL+RRFQKID+ EPS+ + Sbjct: 325 ATSGGAMDASNLLKPALQGGKLRCMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVPDA 384 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV 414 ++I+ GLKP +E HH++RYTA A+++AVELA +YINDR LPD AIDVIDEAGA L+ Sbjct: 385 IKILMGLKPHFEEHHELRYTADAIKSAVELASRYINDRKLPDSAIDVIDEAGAAQHLVSD 444 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 SKRKK + +IE+VVA+IARIP ++VS+ D +TL++L LK LVFGQDKAIEAL+ +I Sbjct: 445 SKRKKVLGTKEIEAVVAKIARIPPRNVSKDDAETLRDLERTLKRLVFGQDKAIEALSASI 504 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 534 K+ARAGL KP+G++LF GPTGVGKTEV QL+ LG+ELLRFDMSEYME+H VSRLI Sbjct: 505 KLARAGLREPEKPIGNYLFTGPTGVGKTEVAKQLAATLGVELLRFDMSEYMEKHAVSRLI 564 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVGFDQGG+LTD V +HPH VLLLDEIEKAHPDV+NILLQVMD+G LTD+NGR Sbjct: 565 GAPPGYVGFDQGGMLTDGVDQHPHCVLLLDEIEKAHPDVYNILLQVMDHGKLTDHNGRAV 624 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 DFRNV+L+MT+N G + +++IG + + + +++ FTPEFRNRLD +I F L Sbjct: 625 DFRNVILIMTSNVGAADMAKEAIGFGRERRTGEDTAAVERTFTPEFRNRLDAVISFAPLG 684 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 ++I QVV+KF+++L+ QL + V +E++ EA WL EKGYD MGARP+ RVIQ+++KK Sbjct: 685 REIILQVVEKFVLQLEAQLIDRNVHIELTPEAAAWLGEKGYDDKMGARPLGRVIQEHIKK 744 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHK 753 PLA ELLFG L GG V V + + + + Q QK + Sbjct: 745 PLAEELLFGKLTKGGLVKVGV--KDDAIVLEVQEPQKPR 781 >UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6Q1Y5_NITSB Length = 729 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 377/747 (50%), Positives = 527/747 (70%), Gaps = 18/747 (2%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 M++ +L A A+ HRHE++TVEH+ LALL++P + L+ D+ ++++L Sbjct: 1 MISNQLNSIFKEAVKYAKRHRHEYLTVEHVFLALLNSPEGAKILKEAGADIEIMKRKLIQ 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +E LP R+ T++ RV++ + H+Q++ + E T ++LVA+F E+ S + Sbjct: 61 HLESVLKPLPE-NVVREPFETVALSRVIENMIRHIQNAEKKEATVGDLLVALFDEEHSYS 119 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 YLL++ +S+LD++ +SH E S ++ E + FT +L + A Sbjct: 120 VYLLKEQGISKLDIMEIVSHQAEVVESKPS----------KKTDEESYLAKFTIDLLKEA 169 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G IDP+IGR+KE+ER +Q+LCRR+KNNPLLVGE GVGKTAIAEGLA +I G++P+V+ Sbjct: 170 KEGKIDPVIGRDKEIERVMQILCRRKKNNPLLVGEPGVGKTAIAEGLALKIAAGEIPDVL 229 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 ++YSLD+G+LLAGTKYRGDFEKR K ++++L+ N+ILFIDEIHTI+GAGA GG Sbjct: 230 EGASLYSLDMGALLAGTKYRGDFEKRLKGVVEELKSIPNAILFIDEIHTIVGAGATQGGS 289 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+N++KP L+SG I+ IG+TTY EF N EKDRAL+RRF K+D+ EP +E T +I+ G Sbjct: 290 MDASNMLKPALASGAIKCIGATTYAEFRNFLEKDRALSRRFAKVDVKEPDLETTFKILKG 349 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 LK KYE HH VRY A+R+AVEL+ KYINDR LPDKAID+IDE GA L KR+ Sbjct: 350 LKDKYEKHHKVRYHINALRSAVELSDKYINDRQLPDKAIDLIDEVGASFHLR--KKRRSV 407 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V V DIE +A++ +P + V+ D + LKNL ++LK V GQ++A+E L AIK +RAG Sbjct: 408 VTVNDIEDTIAKMVGLPPQRVTSDDLEILKNLEEKLKERVLGQEEAVEQLAMAIKRSRAG 467 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 L +KP+GSFLF GPTGVGKTE+ +L++ +G+ RFDMSEYME+H VSRLIGAPPGY Sbjct: 468 LNPPNKPIGSFLFVGPTGVGKTELAKELARTMGVHFERFDMSEYMEKHAVSRLIGAPPGY 527 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 +G+++GGLLT+ + KHP+ VLLLDEIEKAHPD+ NILLQVMDN TLTDNNG ADF++VV Sbjct: 528 IGYEEGGLLTETIRKHPYTVLLLDEIEKAHPDLINILLQVMDNATLTDNNGNVADFKHVV 587 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L+MT+N G E ++ Q++ + E +K+ FTPEFRNRLD I+ F LS +++ Sbjct: 588 LIMTSNVGATEA---NVMGFKQESVSKFDEALKQYFTPEFRNRLDAIVRFRPLSQEIVEG 644 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +VDKFI EL QLD K ++L ++ +A+ +LA+KGY +GARP+ARVI + +K PL NE+ Sbjct: 645 IVDKFIAELNDQLDNKSITLSLTPKAKKYLAQKGYSPELGARPLARVISEEIKTPLTNEI 704 Query: 721 LFGSLVDGGQVTVALDKEKNELTYGFQ 747 LFG L GG+V + D++K +L + Q Sbjct: 705 LFGKLRHGGKVKI--DEKKGKLAFTIQ 729 >UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ClpA n=26 Tax=Proteobacteria RepID=Q2GGQ4_EHRCR Length = 765 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 365/761 (47%), Positives = 529/761 (69%), Gaps = 14/761 (1%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L++ LE SL+ A + A + HE+ T+EHLLLAL + AR A V + L+ + Sbjct: 7 VLSKNLEASLHKALSIAFDFHHEYATLEHLLLALTDDIDARRVFYAFRVSIDKLKITIIN 66 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F+ P L + + +PT F+R++ RA+ H +SG++EVTGAN+L I SE++S + Sbjct: 67 FLRYEIPTL-IDKGISEVKPTAIFERLIHRAIIHAHTSGKSEVTGANILAEILSEKDSYS 125 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGE---------ERMEN 171 A L + + +DVVN+ S+ + N ++ G E +++ Sbjct: 126 ACFLHEQNIKYIDVVNYTSNNNLYAGEFNVDQEFVKYNEYGKSIGNVNKDILKDNETLDS 185 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 + NLN+ A+ G ID +IGR ELER ++VL RRRKNNPL VG+ GVGKTAI EGLA +I Sbjct: 186 YCVNLNEAAKKGKIDYVIGRAYELERTMEVLLRRRKNNPLYVGDPGVGKTAIVEGLALKI 245 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 ++GDVP+ + IYSLD+G+LLAGT+YRGDFE+R K+++K +E N+ILFIDEIHTI+ Sbjct: 246 IEGDVPDQLKKMVIYSLDMGALLAGTRYRGDFEERIKSVIKAIEAKENAILFIDEIHTIV 305 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 GAG+ SGG +DA+NL+KP L+ G +R IG+TTY+E++N FEKDRALARR+QKI++ E S+ Sbjct: 306 GAGSTSGGSLDASNLLKPALARGTLRCIGATTYKEYNNNFEKDRALARRYQKINVEESSV 365 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 ET++I++G+K YE+HH VRYT +A++ A EL+ +YI+ + LPDKA+DVIDEAG +L Sbjct: 366 GETLRILDGIKSYYESHHQVRYTNQAIKYAAELSDRYISGKMLPDKAVDVIDEAGVYCKL 425 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 + K + +DIE +++RI IP ++ +D D +KNL + LK +FGQD AI L Sbjct: 426 H--NTGNKVITGSDIEHIISRITEIPCSNLLFNDLDRVKNLEENLKKDIFGQDFAISHLV 483 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVS 531 ++IK+A+AGL + +KP+ S+LF+GPTGVGKTE+ QL+ +G++L+RFDMSEYME H +S Sbjct: 484 DSIKIAKAGLRNYNKPLASYLFSGPTGVGKTELARQLANHMGMKLIRFDMSEYMESHAIS 543 Query: 532 RLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 ++IG+PPGYVG+DQGGLLTD++ +H ++VLLLDEIEKAH D++NILLQ+MD G +TD G Sbjct: 544 KIIGSPPGYVGYDQGGLLTDSISRHQYSVLLLDEIEKAHSDIYNILLQIMDYGCVTDTYG 603 Query: 592 RKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST--DAMEEIKKIFTPEFRNRLDNIIW 649 +K +F NVV+++TTNAG E + SIG I + T D + I++IF+PEFRNRLD II Sbjct: 604 KKVNFHNVVIILTTNAGAFELSKSSIGFIRNKSFTHGDNEKAIERIFSPEFRNRLDAIIS 663 Query: 650 FDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 F L +V+ ++V KFI +L+ QL +K V ++V+ + +LA+ GY+ A G R + +I Sbjct: 664 FSSLDQEVMLRIVKKFIYQLKEQLAKKNVHIDVADDVLMYLAQSGYNDAYGVRNIENIIS 723 Query: 710 DNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 +KK LA E+LFG L +GG V + LD + N+L Y F A+ Sbjct: 724 KKVKKYLAEEILFGKLFNGGNVKIKLDADTNKLVYDFCCAE 764 >UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J0Q4_DESDA Length = 832 Score = 785 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 387/761 (50%), Positives = 533/761 (70%), Gaps = 22/761 (2%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 ML++ ++ + A A RH+ +TVEH+L AL ++ R LE + LR++LE Sbjct: 1 MLSKSVQSVIRDALMEAHRRRHDMLTVEHVLYALTNSMRGRILLEGSGASVAVLREQLED 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F + V+P + + + T QRVL+RA+ H++++GR+ V ++L++I E+ES A Sbjct: 61 FFNRELEVVPLA-GKHEVAQTEGVQRVLERALGHIRAAGRDTVELGDLLISIMDEEESYA 119 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 Y LRK V RLDV+ F+SHG + ++ D G + EE+ + + + +L A Sbjct: 120 HYYLRKQGVERLDVLTFVSHGMDEGGGSRGVDQGGEG--EEKDAKADPLAQYAVDLTARA 177 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G IDPL+GRE EL+RA++VLCRRRKNNPL VG+ GVGKTA+AEGLA RIV+ DVPE+ Sbjct: 178 REGKIDPLVGRENELDRAVEVLCRRRKNNPLFVGDPGVGKTALAEGLALRIVEDDVPEMF 237 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 ++ +++LD+G LLAGT+YRGDFE R KA++++L++ +ILFIDEIHTI+GAG+ SGG Sbjct: 238 SNAKLFALDMGLLLAGTRYRGDFESRLKAVVQRLKELPEAILFIDEIHTIVGAGSTSGGS 297 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+NL+KP+L+SG++R IGSTTY+EF N FEKDRALARRFQ+ID+TEPS EE + I+ G Sbjct: 298 MDASNLLKPVLASGELRCIGSTTYEEFRNHFEKDRALARRFQRIDLTEPSPEECLAILQG 357 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR---------- 410 L+ +Y H VRY+ AV+A V+L +++ DR LPDKAIDV+DE+GA R Sbjct: 358 LEKRYADFHKVRYSTAAVKAMVDLTARHVRDRLLPDKAIDVMDESGAAVRLGRGVQGARA 417 Query: 411 ------LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD 464 + K V+V D+E +VAR+A IP ++VS ++R+ L +L LK LVFGQD Sbjct: 418 SSGKKAVASGKKLPPLVSVGDVERIVARMAGIPVRTVSGTERNRLASLEKDLKELVFGQD 477 Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEY 524 AIE AI ARAGLG E +P G+FLF GPTGVGKTEV L+K +G+E LR+DMSEY Sbjct: 478 AAIELTVRAILRARAGLGQEQRPAGAFLFYGPTGVGKTEVARSLAKLMGVEFLRYDMSEY 537 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 ME+H VSRLIGAPPGYVGFDQGGLLT+AV K P++V+LLDE+EKAHPD+FN+LLQVMD Sbjct: 538 MEKHAVSRLIGAPPGYVGFDQGGLLTEAVRKAPYSVVLLDEVEKAHPDIFNVLLQVMDYA 597 Query: 585 TLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLI---HQDNSTDAMEEIKKIFTPEFR 641 TLTDN GRK DF +VVL+MT+NAG + R ++G QD + ++ ++ F+PEFR Sbjct: 598 TLTDNTGRKTDFSHVVLIMTSNAGAFDMSRPAMGFGGATRQDAAHKGLKAVENTFSPEFR 657 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 NRLD ++ F L+ D++ ++VDKF+ E+ L+Q+ VSLE+ Q+AR WLA KG+D MGA Sbjct: 658 NRLDALVPFGSLTEDMMLRIVDKFMAEIIESLEQRQVSLELGQKARQWLARKGFDPTMGA 717 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 RP+ R+++ L+ LA+ELLFGSL GG + L + L Sbjct: 718 RPLRRLLRTELEDRLAHELLFGSLAKGGTARLDLVDDALVL 758 >UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 Tax=cellular organisms RepID=B0JIB9_MICAN Length = 795 Score = 776 bits (2004), Expect = 0.0, Method: Composition-based stats. Identities = 308/786 (39%), Positives = 469/786 (59%), Gaps = 40/786 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE--ALEACSVDLVALRQELE 59 NQ+ ++ A AR H + EHLLL L+ +A L+ V L R+ +E Sbjct: 5 FNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDLKVTLHESRRLIE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + T P + T +++ ++A + G N + ++L+AI S+ ES Sbjct: 65 GMTGRGTGYSPV-----NIPFTPKAKKMFEQAFQEARQLGENAIATEHLLLAITSDPESL 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L V + + + + + S ++ A + + NLNQ Sbjct: 120 AAKILIMQGVDLIKLRGLLIKNAGEKVASGRFTAKSDYEDQKNAPQGGILAQYGRNLNQE 179 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 + G IDP+IGRE E+ER +Q+L RR K+NP+L+GE GVGKTAIAEGLA RI GD+PE+ Sbjct: 180 VKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGEPGVGKTAIAEGLAQRIHNGDIPEL 239 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D + +LD+GSLLAGT++RGDFE+R K +++++ + N ILFIDEIHT++GAG+ GG Sbjct: 240 LQDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKSGNIILFIDEIHTLVGAGSM-GG 298 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA+NL+KP L+ G+++ +G+TT E+ E+D AL RRFQ + + EP+ E+ ++I+ Sbjct: 299 AMDASNLLKPALARGELQCLGATTLDEYKRHIERDAALERRFQPVMVGEPTKEQAIEILR 358 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM------- 412 GLK YE H V+Y KA+ AAV L+ +YINDR LPDKAID++DEAG+R L Sbjct: 359 GLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRTHLRYSLQSTS 418 Query: 413 -----------PVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF 461 V+ +I +VA IP +++++ ++L NL +L + Sbjct: 419 PAEVREESPLINPESLIPVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERII 478 Query: 462 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLR 518 GQ +A+ A++ AI+ AR L + ++P+ SF+FAGPTGVGKTE+T L+K L ++R Sbjct: 479 GQQEAVNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIR 538 Query: 519 FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL 578 DMSE+ME HTVS+LIGAPPGY+G+++GG LT+AV + P+ V+L DEIEKAHPDVFN+LL Sbjct: 539 LDMSEFMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLL 598 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER--KSIGLIHQDN---------STD 627 Q++++G LTD+ GR+ DF+N +++MT+N G + E+ S+G D+ S Sbjct: 599 QLLEDGHLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNR 658 Query: 628 AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEAR 687 EE+K+ F PEF NRLD II F L+ + + Q+ D I +L QL +KG+S+EV+ + Sbjct: 659 VTEELKQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFK 718 Query: 688 NWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 + + +GYD + GARP+ R + L+ LA +L G + G + + E Q Sbjct: 719 DLVINEGYDPSYGARPLRRALTRRLEDSLAVAMLSGKVNSGDHAILDVTAEAVVTVSSHQ 778 Query: 748 SAQKHK 753 +++ Sbjct: 779 RSEQSD 784 >UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY Length = 830 Score = 765 bits (1975), Expect = 0.0, Method: Composition-based stats. Identities = 310/824 (37%), Positives = 461/824 (55%), Gaps = 79/824 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + +A AR H ++ EH+LL L+ A +ALE+ + L A+RQ++E Sbjct: 5 FTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I Q T ++VL+ ++ G N + ++L+ + E E Sbjct: 65 EIIGQGQ-----QAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGV 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L K V + + + G+ +E ++ F NL Q Sbjct: 120 AAQVLVKLGADLNRVRQQVIQLLHGYQGKEPQAAGTA--AESAPSTSLVLDQFGRNLTQA 177 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGR+KE+ER +QVL RR KNNP+LVG+ GVGKTA+ EGLA +IV+G++PE Sbjct: 178 AREGKLDPVIGRDKEIERVMQVLSRRTKNNPVLVGDPGVGKTAVVEGLAQKIVKGEIPET 237 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D +Y+LD+G+L+AG++YRGDFE+R + +LK++ + ILFIDE+HT++GAGAA G Sbjct: 238 LKDKQLYTLDLGALVAGSRYRGDFEERLRKVLKEIRSRGDIILFIDELHTLVGAGAAEGA 297 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAA+++KP+L+ G+++ IG+TT E+ EKD AL RRFQ I + EP+I T++I+ Sbjct: 298 -IDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVEEPTISHTIEILK 356 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI----------------- 402 GL+ +YEAHH V T A+ AA +LA +YI+DR+LPDKAID+I Sbjct: 357 GLRDRYEAHHRVSITDGALVAAAQLADRYISDRYLPDKAIDLIDEAGSRMRIRRMTAPPD 416 Query: 403 ----DEAGARARLMPVS------------------------------------KRKKTVN 422 DE A+ R + VN Sbjct: 417 LREFDEKIAKVRRDKEAAIDAQDFERAAALRDEEKRLQAQRAQKEKEWKAGDMDTVAEVN 476 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 I V+A IP +++ + L + + L V GQD AI+AL++AI+ RAGL Sbjct: 477 EELIAEVLATATGIPVFRLTEEESSRLLRMEEELHKRVIGQDDAIKALSQAIRRTRAGLK 536 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPG 539 +P GSF+FAGP+GVGKTE+ L++ L L++ DMSE+ME+HTVSRL G+PPG Sbjct: 537 DPKRPGGSFIFAGPSGVGKTELCKALAEFLFGDEDALIQLDMSEFMEKHTVSRLFGSPPG 596 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+++GG LT+ V + P +V+L DEIEKAH D+FN LLQV++ G LTD GR DF+N Sbjct: 597 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHGDIFNSLLQVLEEGRLTDAQGRNVDFKNT 656 Query: 600 VLVMTTNAGVRETER-KSIGLIHQDN--------STDAMEEIKKIFTPEFRNRLDNIIWF 650 ++VMTTN G R+ + + +G D+ EE+K+ F PEF NR+D+ I F Sbjct: 657 IIVMTTNLGTRDISKGQPMGFARPDDTQTTYDRMKAKVNEELKQHFRPEFLNRVDDTIVF 716 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L+ I +VD + L +L + + +EV A+ LAE+GYD +GARP+ R IQ Sbjct: 717 HQLTQKEITAIVDLMVARLDERLKDRDMGIEVRPHAKKILAERGYDPVLGARPLRRTIQR 776 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKA 754 ++ L+ ++L+G L G V V + E + + F+ K +A Sbjct: 777 EIEDALSEKILYGELKSGQIVIVDAEGEGADAKFTFRGVPKPQA 820 >UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomycetales RepID=C7PZ63_CATAD Length = 841 Score = 760 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 299/808 (37%), Positives = 455/808 (56%), Gaps = 74/808 (9%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L ++ A RA + + EHLL A R L A +VD L Q ++ Sbjct: 42 LLTDSARELISTASQRAGQDGSSDLDTEHLLWAATQVEPTRGILAAANVDPDRLAQTIKK 101 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + S + T + +RVL RA +SSG + ++L A+ +Q+S A Sbjct: 102 SL-----PASGSTPSAEPGLTPAAKRVLMRAHELSRSSGSTYIGPQHILAALTEDQDSGA 156 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 ++L +V D+ I+ +R + P EQ ++ + ++ + A Sbjct: 157 GHVLNTTQVDAKDLGKRITKASRAE---------GMPTGPEQPSDTPTLDEYGRDMTEDA 207 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G +DP++GR E+E+ ++VL RR KNNP+L+G+ GVGKTAI EGLA RIV GDVP + Sbjct: 208 KAGKLDPVVGRADEIEQTVEVLSRRTKNNPVLIGDPGVGKTAIVEGLAQRIVSGDVPTTL 267 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGG 299 + LD+ +L+AG+KYRG+FE+R K ++ ++ + +S ILFIDE+HT++GAG+ G Sbjct: 268 EGKRVVMLDLAALVAGSKYRGEFEERLKNVIDEVGKAADSTILFIDELHTVVGAGSGGEG 327 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA N++KP LS G++ VIG+TT E+ EKD AL RRFQ + I EP++EET++I+ Sbjct: 328 SMDAGNIMKPALSRGELNVIGATTIDEYRKNIEKDAALERRFQPVLIAEPTVEETIEILE 387 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YEAHH V++T +A+ AA ++ +YI+DR LPDKAID+ID+AGAR RL + K + Sbjct: 388 GLRDRYEAHHGVKFTDEALAAAALMSDRYISDRFLPDKAIDLIDQAGARIRLRNLGKSTE 447 Query: 420 TVNVA----------------------------------------------------DIE 427 + DI Sbjct: 448 AIEREDKLAKLTRERDEAVSAENYDRAKDLKARIEELNDEVATIEERREGTLKVTEKDIA 507 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 VV+R IP +++ +R L L D L V GQ++A+ A+ EA++ +RAG+G ++P Sbjct: 508 EVVSRRTGIPVAQLNEDERTRLLKLEDALHDRVVGQEEAVTAIAEAVRRSRAGMGDPNRP 567 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 GSFLF GPTGVGKTE+ L++ L L+RFDMSE+ E+HTVSRL+G+PPGYVG++ Sbjct: 568 TGSFLFLGPTGVGKTELAKALAELLFGDEDRLIRFDMSEFQEKHTVSRLLGSPPGYVGYE 627 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 + G LT+ V + P++V+L DE+EKAHPD+FN LLQV+D+G LTD GR DFR+ V++MT Sbjct: 628 EAGQLTERVRRKPYSVILFDEVEKAHPDIFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMT 687 Query: 605 TNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 +N G + + + M++++ F PEF NRLD ++ F L + +VD Sbjct: 688 SNIGSQLIL--AHMGDTDEIRDQLMDQVRSFFPPEFINRLDEVVIFHSLGKPEMGNIVDL 745 Query: 665 FIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 + + +L + + LEV+++A+NWL E+GY GARP+ R IQ L +A LL G Sbjct: 746 MLDSSRRRLKAQELGLEVTEKAKNWLVERGYKPEFGARPLRRTIQSELDNKVATLLLSGD 805 Query: 725 LVDGGQVTVALDKEKNELTYGFQSAQKH 752 G + D+ + L + + Sbjct: 806 THPGDTIV--ADEADDHLVCTVKHEDEP 831 >UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n=21 Tax=Bacteria RepID=C8NK17_COREF Length = 927 Score = 760 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 306/853 (35%), Positives = 459/853 (53%), Gaps = 105/853 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + +A AR H ++ EH+LL L+ A +ALE+ + L A+RQE+E Sbjct: 5 FTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVRQEVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + P + T ++VL+ ++ G + +L+ + E E Sbjct: 65 EIIGHGSK--PTTGH---IPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGV 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDP--------------GSQPNSEEQAGG 165 AA +L K V + E Q P GS P G Sbjct: 120 AAQVLVKLGADLPRVRQQVIQLLSGYEGGQGGSPDSPQGGQGGDAVGAGSAPGGRATGSG 179 Query: 166 ------EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 ++ F NL Q A+ G +DP++GR+KE+ER +QVL RR KNNP+L+GE GVG Sbjct: 180 AGERSNSLVLDQFGRNLTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVG 239 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN 279 KTA+ EGLA IV G VPE + D +YSLD+GSL+AG++YRGDFE+R K +LK++ Q + Sbjct: 240 KTAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGD 299 Query: 280 SILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 ILFIDEIHT++GAGAA G +DAA+L+KP L+ G+++ IG+TT E+ EKD AL R Sbjct: 300 IILFIDEIHTLVGAGAAEGA-IDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALER 358 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 399 RFQ + + EPS+E +++I+ GL+ +YEAHH V T A+ AA +L+ +YINDR LPDKA+ Sbjct: 359 RFQPVQVPEPSVELSIEILKGLRDRYEAHHRVSITDGALVAAAQLSDRYINDRFLPDKAV 418 Query: 400 DVI---------------------DEAGARARLMPVS----------------------- 415 D+I DE A R + Sbjct: 419 DLIDEAGARMRIKRMTAPESLREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKLGEE 478 Query: 416 -------------KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG 462 + V I V+A IP +++++ L N+ + L + G Sbjct: 479 RAEKEKQWRSGDLEEIAEVGEEQIAEVLATWTGIPVFKLTEAESSRLLNMEEELHKRIIG 538 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRF 519 QD+A++A++ AI+ RAGL +P GSF+FAGP+GVGKTE++ L++ L + L++ Sbjct: 539 QDEAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLIQI 598 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DM E+ +R T SRL GAPPGYVG+++GG LT+ V + P +V+L DEIEKAH +++N LLQ Sbjct: 599 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQ 658 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK-SIGLIHQDN----------STDA 628 V+++G LTD GR DF+N VL+ T+N G ++ + +G + Sbjct: 659 VLEDGRLTDGQGRIVDFKNTVLIFTSNLGTQDISKAVGLGFSGSNETDSDAQYDRMKNKV 718 Query: 629 MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARN 688 +E+KK F PEF NR+D I+ F L+ + I Q+V+ I + L K + +E++ +A+ Sbjct: 719 HDELKKHFRPEFLNRIDEIVVFHQLTREQIIQMVELLIGRVSRALADKDMGIELTDKAKA 778 Query: 689 WLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD------KEKNEL 742 LA +G+D +GARP+ R IQ ++ ++ ++LFG + G VTV +D K + Sbjct: 779 LLASRGFDPVLGARPLRRTIQREIEDAMSEKILFGEIGAGEIVTVDVDGWDGESKNTDGA 838 Query: 743 TYGFQSAQKHKAE 755 T+ F K + Sbjct: 839 TFTFTPRPKPLPD 851 >UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6QBZ7_SULNB Length = 729 Score = 758 bits (1957), Expect = 0.0, Method: Composition-based stats. Identities = 341/745 (45%), Positives = 496/745 (66%), Gaps = 17/745 (2%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 M++ L A A+E+RHE++TVEH+ L+++ + E L +L L E Sbjct: 1 MISIALNDVFKNAVKYAKENRHEYLTVEHVFLSVVRSEEGIEILSTLDANLEILE---EG 57 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +E +P+ +E + T++ R + + H+ S+GR E + ++L AIF ++ S A Sbjct: 58 IVEHIHKTIPSLKEAVEPFETVALSRAINDMMTHIHSAGRTEASIGDMLAAIFMQEHSYA 117 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 YL++K ++R+D++ ISH + + +Q +++ A E +E FT L LA Sbjct: 118 VYLMKKEGIARVDILEVISH---------NREDHAQTETDKSAKEETVLEQFTMELVALA 168 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G IDP++GR E+ R +Q LCRR+KNNPLLVGE GVGKTAIAEGLA +I +GDVP+V+ Sbjct: 169 KTGKIDPVVGRVDEINRVMQTLCRRKKNNPLLVGEPGVGKTAIAEGLALKISEGDVPDVI 228 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 D +Y+LD+G+L+AGTKYRGDFEKR K ++ +L Q ++ILFIDEIHT++GAGA SGG Sbjct: 229 KDAKVYALDMGALIAGTKYRGDFEKRLKGIINELSQMDDAILFIDEIHTMVGAGATSGGS 288 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+NL+KP L+ G ++ IG+TTY E+ N F+KD+AL+RRF KID+ EPS+E+T I+ G Sbjct: 289 MDASNLLKPALARGDLKCIGATTYAEYRNFFDKDKALSRRFAKIDVEEPSVEDTFTILKG 348 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 ++ KYE HH++++T +A+++A++L+VKY++DR LPDKA+D+IDE GA M Sbjct: 349 VQHKYEDHHNIKFTDEALQSAIDLSVKYLHDRFLPDKAMDIIDEVGA--HFMLKGAEGVI 406 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V DIE VA++ ++P + D LK L L + GQ++AIE L AIK + AG Sbjct: 407 VKPKDIEESVAKMMKLPSTVIGTDDTKKLKTLEKDLSAHIIGQNEAIEELATAIKRSYAG 466 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 L ++P+GSFLF GPTGVGKT + QL++ + + R DMSEYME HT+SRL+GAPPGY Sbjct: 467 LNAPNRPIGSFLFVGPTGVGKTALATQLAETMHVHFERIDMSEYMEAHTISRLVGAPPGY 526 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG++QGGLLT+ + KHPH VLLLDEIEKAHPD+ NILLQVMD LTDNNG +DF+NV+ Sbjct: 527 VGYEQGGLLTEMIKKHPHTVLLLDEIEKAHPDIMNILLQVMDGAKLTDNNGVVSDFKNVI 586 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L+MT+N G +E ++ ++DNS + +K F PEF NRL ++ F+ L + + Sbjct: 587 LIMTSNIGTKEA---NVMGFNKDNSMKTDKALKAFFAPEFMNRLSAVVEFNTLDLETLVS 643 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +VD + +L + L K + ++VS++A+ +LA +GYD GAR +ARVI + +K+ L E+ Sbjct: 644 IVDVELDKLNLMLKPKNIKVKVSKKAKEYLANEGYDERYGARHIARVIDEKIKEALTEEI 703 Query: 721 LFGSLVDGGQVTVALDKEKNELTYG 745 LFG L GG V V L K + Sbjct: 704 LFGRLKKGGLVKVGLKNGKLTFEFS 728 >UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit n=5 Tax=Campylobacterales RepID=A8EW19_ARCB4 Length = 737 Score = 758 bits (1957), Expect = 0.0, Method: Composition-based stats. Identities = 368/754 (48%), Positives = 520/754 (68%), Gaps = 24/754 (3%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 M+++EL A + A+ +HE++TVEH+ L L+++ + VD L EL++ Sbjct: 1 MISKELRHIFAQAVSYAKSSKHEYLTVEHVFLMLINDQTIENLFIDLGVDTNILFNELKS 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +I++ TP+LP + + T+S + V H QSSG+ ++ VAI +++S + Sbjct: 61 YIDENTPLLPNDANDEPIE-TVSLSSTIDYMVSHTQSSGKTNANVEDMFVAILKDEKSYS 119 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 YLL+K+ + R+D++ ISH KDE Q +D S+ E+ ++ ++ L +A Sbjct: 120 TYLLKKYGIQRVDILEEISH---KDEDEQKNDENSE--------NEKVLDKNSSELVSIA 168 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G IDP+IGR++E+ R I++L RR+KNNP+LVGE GVGKTAIAEGLA +I Q VPE + Sbjct: 169 KKGEIDPVIGRDREISRVIEILSRRKKNNPILVGEPGVGKTAIAEGLALQIAQKKVPEFL 228 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 D ++SLD+GS++AGTKYRGDFEK+ K+LLK++ + N+ILFIDEIHTI+GAG+ G Sbjct: 229 LDSKVFSLDMGSMIAGTKYRGDFEKKLKSLLKEVSKIKNAILFIDEIHTIVGAGSVGGSA 288 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+N++KP+L++GK+R IG+TT+ EF N F KD+AL+RRF K+D+ EPSIE+++ I+ G Sbjct: 289 MDASNILKPMLANGKLRCIGATTFSEFRNDFSKDKALSRRFAKVDVEEPSIEDSILILEG 348 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS----- 415 LK KYE +H V+Y+ A+++AVEL+ KYI DR LPD AIDVIDE GA ++ + Sbjct: 349 LKSKYEEYHGVKYSKSAIQSAVELSKKYITDRFLPDCAIDVIDEVGAAKKISLATTLKTK 408 Query: 416 -KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 + T+ D+E +++++A IP KS +++D LKNL ++ VFGQD AI + +AI Sbjct: 409 AESNITITSKDVEEIISKMAHIPPKSATKTDLSLLKNLEKNMQKRVFGQDTAISTIVQAI 468 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 534 K +AGLG + KP+GSFLF GPTGVGKTEV +LS +GI RFDMSEYME HTVSRLI Sbjct: 469 KRNKAGLGLDKKPIGSFLFTGPTGVGKTEVARELSLQMGIHFERFDMSEYMEAHTVSRLI 528 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAP GYVGF+QGGLLT+A+ KHPH VLLLDEIEKAHPD+ +ILLQVMDN LTDN+G KA Sbjct: 529 GAPAGYVGFEQGGLLTEAIRKHPHTVLLLDEIEKAHPDLMSILLQVMDNAQLTDNSGNKA 588 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 DF+NVVL+MT+N G E +G + + + I K F PEFRNRLD ++ F+ L+ Sbjct: 589 DFQNVVLIMTSNLGATEA--NVMGFAKNEKLNE-NKAINKFFAPEFRNRLDAVVTFESLN 645 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 DV+ +VV KFI +L+ QL K + +E+S +A+ LA GYD+AMGARP+ +VI D +K Sbjct: 646 IDVVSKVVGKFIEDLEKQLVDKKIKIEISVKAKKELAILGYDKAMGARPLNKVISDKIKN 705 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 PL +E+LFG L GG V + + NE + F + Sbjct: 706 PLTDEILFGKLKKGGIVKIDYN---NEFIFNFSN 736 >UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Helicobacter RepID=C5ZY74_9HELI Length = 746 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 341/746 (45%), Positives = 503/746 (67%), Gaps = 18/746 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +++EL L A +RA+ HE++T+EH+ +LL + + +A++ C ++ AL+ ++E + Sbjct: 4 ISKELNYILQAAQSRAKHLGHEYLTLEHIFHSLLDSQTVIKAIQECGGNIKALKSQIERY 63 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + P + E TL+ RV++ V HV+ + R E ++L AI E ++ Sbjct: 64 LTHFLQSHPDASEL--PIETLAVTRVIEIMVSHVKGAQRKEAQVGDLLAAILEEDKAFCT 121 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 LL+ ++RL+++ +I+ + +Q +++ E +E + NL Q A+ Sbjct: 122 QLLKAQGITRLNILEYITENQDTQQ--------AQKFEKDENKQESILEKYCINLTQEAK 173 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G IDP+IGR+KE+ER ++VL RR+KNNPLLVGE GVGKTAIAEGLA + Q + P + Sbjct: 174 EGKIDPIIGRDKEIERCLEVLLRRKKNNPLLVGEPGVGKTAIAEGLAIVLNQENNP--LF 231 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 I+ L++G+L+AGTKYRGDFEKR KAL +++ + N ILFIDEIH +IGAGA + G + Sbjct: 232 GNEIFMLNMGALVAGTKYRGDFEKRIKALSEEVLERKNVILFIDEIHMLIGAGATNSGSM 291 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DA+NL+KP+L SGK+R IG++TY E+ N +KD+A +RRF KID+ EPS EE V I+ G+ Sbjct: 292 DASNLLKPMLGSGKLRCIGASTYAEYRNFLDKDKAFSRRFAKIDVDEPSQEEAVLILQGV 351 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTV 421 K YE HH+V Y + +R AVEL+ +Y++DR LPDKAIDVIDE GA +L S + V Sbjct: 352 KKYYEKHHNVIYPLETLRLAVELSSRYLHDRFLPDKAIDVIDEVGAAYKLASKSGK---V 408 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 +++ I+ +VA++A+IPE ++ D++ LKNL L+ +FGQD AI+ + A+K RAGL Sbjct: 409 SLSSIKQMVAKMAKIPEIEATKDDKNLLKNLQKHLQSRIFGQDLAIKEIVTALKRNRAGL 468 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYV 541 G +KP+GSFLF+GP+GVGKTE+ +++KALGI R DMSEYME+++ S LIGAP GYV Sbjct: 469 GAPNKPIGSFLFSGPSGVGKTELAKEIAKALGINFERIDMSEYMEKYSSSGLIGAPAGYV 528 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+D+GG+LT+ + K+PH +LLLDEIEKAHPDV NI LQVMDN LTDNNG ADF +V+L Sbjct: 529 GYDKGGILTEMIKKNPHTLLLLDEIEKAHPDVLNIFLQVMDNAKLTDNNGESADFSSVIL 588 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 +MT+N G +E ++G QD+ IK FTPEFRNRLD I+ F+ LS I ++ Sbjct: 589 IMTSNVGSKEA--PTLGF-TQDSVAKFNSAIKDNFTPEFRNRLDAIVAFNPLSETEILKI 645 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 V+K I +L Q+ K + + + + A+ LA+ GY+ +GARP+ VIQ+ +K PL++ +L Sbjct: 646 VEKNINDLNKQIAPKNIHILLDKSAKEQLAKLGYNPELGARPLGLVIQEKIKNPLSDLML 705 Query: 722 FGSLVDGGQVTVALDKEKNELTYGFQ 747 FG L GG+V + +K+ + +Y + Sbjct: 706 FGELEKGGEVIFSYNKKSDSFSYKTK 731 >UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit ClpA n=4 Tax=Clostridium RepID=A3DES0_CLOTH Length = 776 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 366/777 (47%), Positives = 502/777 (64%), Gaps = 34/777 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 L+ L A+ A+ +HEF T EH+L A L R+ +E C + ++++L F Sbjct: 4 LDDVANKILIAAYNEAKHQKHEFFTPEHILYASLFFDEGRDIIENCGGKVEDIKKDLLEF 63 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 P++ E + +L V+Q + ++GR + +++VA++ E+ES A+ Sbjct: 64 FRNNMPIV----ENHEPIESLGINSVMQATAYQCIAAGREYIRIGDIIVALYGEKESFAS 119 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNS---------------------- 159 Y+L+K+ + +LDV+ +ISHG + S Sbjct: 120 YILQKNGIKKLDVLKYISHGVSLVPKNMETSLKSLETDTYLEAYQYADDWEYDYEYEDID 179 Query: 160 ------EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 EE + +E+FT +L + AR G IDPLIGRE LER IQVL RR KNNP+ V Sbjct: 180 EDEDIDEESSSKSNFLEHFTIDLTEKARKGKIDPLIGREDILERTIQVLSRRLKNNPIHV 239 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 G+ GVGKTAI EGLA IV+ VP+ + IY LD+GS+LAGTKYRGDFE+R K +L + Sbjct: 240 GDPGVGKTAITEGLARLIVEDKVPKSLKGSKIYYLDMGSMLAGTKYRGDFEERIKKVLNE 299 Query: 274 LEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEK 333 ++ +I++IDEIHTI+GAGA S G +DA+N+IKP L+ G +R IGSTTY+E+ FEK Sbjct: 300 IQNQPKAIVYIDEIHTIVGAGAVSDGAMDASNIIKPFLTQGTLRFIGSTTYEEYKKYFEK 359 Query: 334 DRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH 393 DRAL+RRFQKID+ EPSI++T +I+ GLK +YE +H V+YT A+R A EL+ KYI DRH Sbjct: 360 DRALSRRFQKIDVPEPSIDDTFKILKGLKDRYEEYHKVKYTDSALRLAAELSAKYIQDRH 419 Query: 394 LPDKAIDVIDEAGARARLMPVSKRK-KTVNVADIESVVARIARIPEKSVSQSDRDTLKNL 452 LPDKAIDVIDE GA RL + K T+ DIE V+ IARIP +SVS+ + LKNL Sbjct: 420 LPDKAIDVIDETGAYVRLHAKDEDKVITIKNKDIERTVSAIARIPIQSVSRDEISKLKNL 479 Query: 453 GDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 +LK +FGQDKAI+ + +AIK +RAG KPV S LF GPTGVGKTE+ QLS L Sbjct: 480 DVKLKSTIFGQDKAIDTVVQAIKRSRAGFNENEKPVASLLFVGPTGVGKTELAKQLSLHL 539 Query: 513 GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 GI +RFDMSEY E+HTVSRLIGAPPGYVG+++GGLLTDA+ K PH VLLLDEIEKAHPD Sbjct: 540 GIPFIRFDMSEYQEKHTVSRLIGAPPGYVGYEEGGLLTDAIRKTPHCVLLLDEIEKAHPD 599 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-EE 631 ++N+LLQVMD LTDNNG+KADFRNV+L+MT+NAG RE R IG ++ AM +E Sbjct: 600 IYNVLLQVMDYAVLTDNNGKKADFRNVILIMTSNAGAREVGRTLIGFDSRNVDRSAMTKE 659 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLA 691 +++IF+PEFRNRLD+I+ F+H++ ++ + K I + + +L K + L+V++ W+A Sbjct: 660 VERIFSPEFRNRLDDIVVFNHINEEMALLITKKAINQFKEKLKTKNIKLKVTERCCKWIA 719 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 +KG GAR + R +QD +K +E+LFG L GG + + + +++ Q Sbjct: 720 QKGLSSIYGAREILRYVQDKIKTYFVDEVLFGELSKGGTAIIDVVDGEIKISKKTQR 776 >UniRef50_D1Y107 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y107_9BACT Length = 774 Score = 750 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 294/759 (38%), Positives = 457/759 (60%), Gaps = 23/759 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + + + +A A H F+ EHL++ L++ S+ AL L A +++ Sbjct: 5 FTERSKRVIQIAHREALRLGHAFIGTEHLMIGLIAEESSVAALALKEAGLAA--EDVARE 62 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 I P + D + + VL A+ + + V ++L+ + S E A Sbjct: 63 ILALRPPAAPYAQPVDLPLSDRARGVLNAAIHLARELHSSYVGTEHLLLGVLSAPECTAC 122 Query: 122 YLLRKHEVSRLDV-----VNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNL 176 + L + + ++ ++ +R++ + ++P ++ ++ + +L Sbjct: 123 HALAELGLDTENLRVSLKKQLLAQSSRQEAENDKENGDARPAAD---VKTPTLDKYCVDL 179 Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 A G +DPLIGRE+E+ R +Q+LCRRRKNNP+LVG+ GVGKTAI EGLA++I +G Sbjct: 180 TAKAAKGELDPLIGREQEMHRMMQILCRRRKNNPVLVGDPGVGKTAIVEGLAYKIQKGSA 239 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA 296 P ++ + L +G+L+AGTKYRG+FE R K ++ +L N ILFIDE+HT++GAG+A Sbjct: 240 PSLLKGKRVVELTMGTLVAGTKYRGEFEDRMKKIVDELTAAKNVILFIDELHTVVGAGSA 299 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 G +DAAN++KP L+ G+ +VIG+TT E++ EKD AL RRFQ + + EP + + Sbjct: 300 E-GSLDAANILKPSLARGEFQVIGATTRDEYTKNIEKDAALERRFQPVAVGEPDQDAALA 358 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 I+ GLK YE HH VRYT A+ AAV L+ +Y++DR LPDKAID+IDEAGA+ RL + Sbjct: 359 ILQGLKESYEKHHSVRYTEGALEAAVRLSSRYLSDRSLPDKAIDLIDEAGAKVRLDLDGR 418 Query: 417 RKK---TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 + TV+ ++ V++ + IP K++++ + L L + + GQD+A+ AL A Sbjct: 419 QIPEGLTVDEEEVAGVLSEWSGIPVKTLTEHEAQRLLRLESEIHQRLVGQDEAVSALCRA 478 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTV 530 ++ +R+GL +PVGSFLF GP+GVGKTE+ L++AL LL FDMSEYMERH Sbjct: 479 VRRSRSGLKDPRRPVGSFLFLGPSGVGKTELARCLARALFGSEKALLAFDMSEYMERHEA 538 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 ++LIGAPPGYVG+D+ G LT+AV +HP +V+L DEIEKA+PDVFN+LLQ+++ G LTD + Sbjct: 539 AKLIGAPPGYVGYDEEGRLTEAVRRHPWSVVLFDEIEKANPDVFNLLLQILEEGRLTDAH 598 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIH------QDNSTDAMEEIKKIFTPEFRNRL 644 GR DF+N V++MT+N GVRET + +G + S + +K+ F PEF NR+ Sbjct: 599 GRTVDFKNTVVIMTSNLGVRETAKAGLGFSASAEAEKKKQSEAVLGAVKEFFRPEFLNRV 658 Query: 645 DNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 D + F LS + + +V D + +L+ +L + G+ L ++++AR +L + GARP+ Sbjct: 659 DAQLVFHPLSAEEMTRVFDIMMFDLRARLGEHGIILSMAKDAREFLLRAAAAQNQGARPL 718 Query: 705 ARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 R+IQ ++ PL++ +L G + DG V LD E + Sbjct: 719 RRLIQTKIEDPLSDLILSGEVPDGSTVDCVLDGEALAFS 757 >UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular organisms RepID=A9BF41_PETMO Length = 830 Score = 748 bits (1931), Expect = 0.0, Method: Composition-based stats. Identities = 311/824 (37%), Positives = 476/824 (57%), Gaps = 74/824 (8%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 + A A++ H ++ EH+LL LL E ++ +++ E+ Sbjct: 5 FTERAAKVFIEAQNEAKQMGHPYVGTEHILLGLLKVGGGHLDTVFEEFNLYYNSIKMEIT 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + QPT +R+L+ A + G N++ ++L+ I E E Sbjct: 65 NVVGTN----STQGIIGSPQPTPRAKRILELAYDESELMGFNKIDAEHLLLGICREAEGI 120 Query: 120 AAYLLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 A+++L++ ++ R ++ + + G + + ++ +++E + T+ Sbjct: 121 ASHILKRSGINLTLMRKELTDMMIKGRSTGRMEIAKTEELEERKRQKQNALKQLEEYGTD 180 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L A +DP+IGRE E+ R +++L RR+KNNP+L+GE+GVGK+A+ EGLA RIV+G Sbjct: 181 LTAQAENRKLDPIIGREIEINRIMEILARRKKNNPVLIGEAGVGKSAVVEGLAQRIVEGR 240 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VPE++ + TI+SLDI S++AGTKYRG+FEKR K L++ L++ + ILFIDE+H I+ AGA Sbjct: 241 VPEILKNKTIFSLDITSIVAGTKYRGEFEKRMKKLMQILQKTEDIILFIDELHMIVEAGA 300 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 A G +DAAN++KP L++G+I VIGSTT E+ EKD AL RRFQKI +TEP+IEET+ Sbjct: 301 AEGSSMDAANVLKPALANGEITVIGSTTANEYRKFIEKDPALERRFQKIYVTEPTIEETI 360 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR----- 410 I++G+K KYE HH V+Y A+++AV+L+V+YI DRHLPDKAIDVIDEAGA+AR Sbjct: 361 NILSGIKFKYEEHHKVKYNHGAIQSAVQLSVRYITDRHLPDKAIDVIDEAGAKARLSALT 420 Query: 411 ----------------------------------------------LMPVSKRKKTVNVA 424 + + Sbjct: 421 LPDKLKIQYEKIADIESKRNDPNSKENVEEKLKKMKEKYEEEYSKWRSEAENKIIQITEE 480 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI +++ +P + + + + L NL L V GQD+AI+++ +AI+ AR+GL Sbjct: 481 DIAEIISNWTGVPLRQLRAEEMEKLLNLEAVLHERVVGQDEAIKSVAKAIRRARSGLKDP 540 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYV 541 +P G F+F GPTGVGKTE+ L+ L L+R DMSEYME+ +VSRL+GAPPGYV Sbjct: 541 RRPTGVFMFLGPTGVGKTELAKTLATYLFGNETHLVRIDMSEYMEKFSVSRLVGAPPGYV 600 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+D+GG LT+ V + P++V+LLDEIEKAH DV+NILLQ+MD G LTD+ GR DFRN ++ Sbjct: 601 GYDEGGQLTEIVRRRPYSVILLDEIEKAHTDVYNILLQIMDEGRLTDSQGRTVDFRNTII 660 Query: 602 VMTTNAGVRETE--RKSIGLIHQ--------DNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 +MT+N G + ++S+G + + D M +K F PEF NRLD++I F Sbjct: 661 IMTSNLGSEQISKTKRSLGFVEEGTIESEYKDIKEQVMSAVKAAFKPEFINRLDDVIVFH 720 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L+ + + ++ + +L+ +L+++ ++L V + A ++L EKGYD GARP+ R IQ Sbjct: 721 PLTKNQLKNIISIQLSDLKSRLEERNLTLSVKESAIDFLLEKGYDSVFGARPLKRAIQRY 780 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAE 755 ++ PL+ ELL G +G ++ V K K L++ K + E Sbjct: 781 IEDPLSEELLKGKYEEGDKILVTHQKSKESLSFRRVPKDKKQME 824 >UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n=14 Tax=Rickettsiales RepID=D1AUG7_ANACI Length = 781 Score = 743 bits (1919), Expect = 0.0, Method: Composition-based stats. Identities = 368/761 (48%), Positives = 516/761 (67%), Gaps = 17/761 (2%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L++ LE SL+ A + A + RHE T+EHLLLAL + R L C V + LR L Sbjct: 14 VLSKNLEASLHRALSIAFDFRHECATLEHLLLALTDDLDVRRVLYVCRVSIDRLRATLIN 73 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F+ + ++ + +P+++F++V+ RA+ H +SG++E+ G NVL IF E++S + Sbjct: 74 FLRYEMSIAM-NQSVTEVRPSMAFEKVVHRAIVHAHASGKDEINGVNVLAEIFLEKDSCS 132 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQ-------------AGGEE 167 L +H V +DVV+ IS +E D G + ++ + E Sbjct: 133 VSFLNEHNVKYIDVVSCISSNEHPEELYDQHDLGKDVDFVKRGAVGFPHISKDVVSKDGE 192 Query: 168 RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGL 227 +E + NLN LA+ G ID +IGR+ E ER I+VL RRRKNNPL VG+SGVGKTAI EGL Sbjct: 193 SLEAYCVNLNVLAKNGKIDYVIGRQYEQERTIEVLLRRRKNNPLYVGDSGVGKTAIVEGL 252 Query: 228 AWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEI 287 A RIV+G++ + IYSLD+GSLLAGT+YRGDFE+R KA+++ +E N++LFIDEI Sbjct: 253 ALRIVEGNIVPQLKCVEIYSLDMGSLLAGTRYRGDFEERIKAVIRAIENKKNAVLFIDEI 312 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HTIIGAG+ SG +DA+NL+KP L+ G IR IG+TTY+E+++ FEKDRALARR+QKI++ Sbjct: 313 HTIIGAGSTSGSPLDASNLLKPALARGSIRCIGATTYKEYNSNFEKDRALARRYQKINVE 372 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 E ++EET+QI++G+K YE +HDV YT++AV+ A EL+ +YI +R LPDKA+DV+DEAG Sbjct: 373 ESTVEETIQILSGIKSYYEIYHDVHYTSQAVKYAAELSDRYIAERMLPDKAVDVLDEAGV 432 Query: 408 RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 A+L + K V DIES+++RI IP ++ SD +KNL + LK ++FGQD AI Sbjct: 433 YAKLRS-GENGKVVTGRDIESIISRITEIPCDNLFASDTHKVKNLEENLKQVIFGQDAAI 491 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMER 527 + +AI++A+AGL KP+ S+L AGPTGVGKTE+ QL+K +G++L+RFDMSEYME Sbjct: 492 SQIVDAIRIAKAGLRSHQKPLASYLLAGPTGVGKTELVKQLAKNMGMKLVRFDMSEYMES 551 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 HTV+R+IG+PPGYVG++QGGLLTD + ++ ++VLLLDEIEKAH V+NILLQ+MD G +T Sbjct: 552 HTVARMIGSPPGYVGYEQGGLLTDTIARNQYSVLLLDEIEKAHSSVYNILLQIMDYGCIT 611 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN--STDAMEEIKKIFTPEFRNRLD 645 D GRK FRNVV+V+TTNAG E + ++G + I+KIF PEF NRLD Sbjct: 612 DTYGRKVSFRNVVIVLTTNAGAVEFSQNAVGFDRDRTFHIGSERKAIEKIFGPEFCNRLD 671 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 ++ F +LS DV+ +VV KFI EL+ QL +KGV + + + + +L + G GAR Sbjct: 672 AVVSFSYLSADVMEKVVGKFIAELRDQLSRKGVDISIDKASVEFLTKMGQQDGYGARKAQ 731 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 VI +KK LA E+LFG L GG+V V D +K + +Y F Sbjct: 732 SVIAQKIKKHLALEMLFGKLAYGGRVEVRFDPQKEDFSYEF 772 >UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit clpC n=90 Tax=Bacteria RepID=CLPC_STAHJ Length = 824 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 290/828 (35%), Positives = 466/828 (56%), Gaps = 91/828 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L + + L A A H + EHLLL L+ P A + LE+ ++ + +E+E Sbjct: 6 LTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I ++ T ++V++ ++ + N V ++L+ + E E Sbjct: 66 KLIGHG------QDQTGTLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGV 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA + + +N + + S + ++ + ++ ++ +L + Sbjct: 120 AARVFANLD------LNITKARAQVVKALGSPEMSNKNATANKSNNTPTLDGLARDLTVI 173 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G +DP++GR+KE+ R I+VL RR KNNP+L+GE GVGKTAIAEGLA IV +VPE Sbjct: 174 AKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPET 233 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + SLD+G+++AGTKYRG+FE+R K +++++ Q N ILFIDE+HT++GAG A G Sbjct: 234 LKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGA 293 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA+N++KP L+ G+++ IG+TT E+ EKD AL RRFQ I + EP++E+T+ I+ Sbjct: 294 -IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIAILK 352 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YEAHH + + +A+ AA +L+ Y++DR LPDKAID+IDEA ++ R + Sbjct: 353 GLRDRYEAHHRINISDEALEAAAKLSDCYVSDRFLPDKAIDLIDEASSKVR---LKSHTT 409 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR------------------------ 455 N+ +IE + ++ + +V + + NL D+ Sbjct: 410 PNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEDAKNEWKTTQGDQST 469 Query: 456 -LKMLVFG-----------------------------QDKAI------EALTEAIKMARA 479 L G D+ I ++++A++ ARA Sbjct: 470 SLSKEDIGEVIAGWTGIPLTKINETESDRLLNLEQTLHDRVIGQNDAVTSISKAVRRARA 529 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGA 536 GL +P+GSF+F GPTGVGKTE+ L++++ E ++R DMSE+ME+H VSRL+GA Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGA 589 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG D+GG LT+ V + P++V+L DEIEKAHPDVFNILLQV+D+G LTD GR+ DF Sbjct: 590 PPGYVGHDEGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDF 649 Query: 597 RNVVLVMTTNAGVRETERK--------SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNII 648 RN V++MT+N G +E + + S G ++ M+E+K F PEF NR+D+II Sbjct: 650 RNTVIIMTSNVGAQELQDQRFAGFGGGSEGHDYETIRKTMMKELKNSFRPEFLNRVDDII 709 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F LS D + ++V + +L +L ++ +++ V+ +A+ +AE+GYD GARP+ R I Sbjct: 710 VFHKLSKDELKEIVTMMVNKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAI 769 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 Q ++ L+ +L G+ ++G +V + D + +E Y ++ Sbjct: 770 QKTVEDNLSELILDGNQIEGKEVVI--DHDGDEFKYNINEKNNGISDE 815 >UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E9C6_9ACTN Length = 880 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 301/841 (35%), Positives = 453/841 (53%), Gaps = 87/841 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++MA A + + EHLLLAL A EAL + + + L+ Sbjct: 5 FTDRARKVMSMAKQEALDLHSNKVGTEHLLLALAKEDEGIAAEALRSLDISYDDIMDTLK 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ T P E T V++R+ + + + V+ ++L+ I E Sbjct: 65 E-VQTTVPEPSEETEAAKLAFTPLVISVMERSFRVARENNQTYVSTEHLLIGIVEEGNGM 123 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDP--------------GSQPNSEEQAGG 165 A +L + VS + I T KD+ + S+++ G Sbjct: 124 AMDILMRLGVSSASIKKAIEKLTAKDQDKKRPLAGAGAGRPGAGLPFFSGSDASQQKGSG 183 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 E ++ F TNL Q AR G +DP+IGREKE++R +++L RR KNNPL++G+ GVGKTAI E Sbjct: 184 TETLKQFATNLTQKARDGELDPVIGREKEVQRMMEILSRRTKNNPLILGDPGVGKTAIVE 243 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFID 285 GLA +I G+VPE + + I++LD+ L+AG KYRG+FE+R K ++++ + + ILFID Sbjct: 244 GLAQQIAAGNVPENLMNQNIWTLDLPGLVAGAKYRGEFEERLKNVIQEATEADDVILFID 303 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 E+HTIIGAG+A G +DA++++KP+L+ G ++IG+TT +EF KD A RRFQ ID Sbjct: 304 EMHTIIGAGSAE-GSIDASSMLKPVLARGAFQIIGATTAEEFRKYLTKDPAFERRFQTID 362 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 + EPS+E+TV+I+ LKP+YE HH VRYT A+ AA L+ +YI DR LPDKAID+IDEA Sbjct: 363 VEEPSVEDTVKILTALKPRYEEHHHVRYTQGAIEAAANLSNRYIQDRFLPDKAIDLIDEA 422 Query: 406 GARARLMPVSKRKKTVNVAD----------------------------------IESVVA 431 GARAR+ + + A Sbjct: 423 GARARIAANRAPEPVREAEHRVEELKAAAQEATESDDMNKAAEITEQQKAAEIELAEAKA 482 Query: 432 RIARI-----------------------PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIE 468 P S+++S+ L LK + GQD+A+E Sbjct: 483 AWTAELDASPLTIDVSQIADIVSVTSGVPVSSLTESESRRLLQAESVLKTRIIGQDEAVE 542 Query: 469 ALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYM 525 A+ +A++ +R+ L +P GSF+F GPTG GKTE+ L++ L L+ FDMSE+ Sbjct: 543 AVAKAVRRSRSPLKDPRRPGGSFIFLGPTGTGKTELAKTLAEYLFGSKDALISFDMSEFG 602 Query: 526 ERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGT 585 VS+LIG+PPGYVG D+GG LT AV +HP++V+L DEIEKAHPD+FNILLQV++ G Sbjct: 603 SEFEVSKLIGSPPGYVGHDEGGQLTKAVRRHPYSVVLFDEIEKAHPDIFNILLQVLEEGR 662 Query: 586 LTDNNGRKADFRNVVLVMTTNAGVRETERKS---------IGLIHQDNSTDAMEEIKKIF 636 LTD+ G+ DFRN V++MT+N G RE + + GL + AM E+K++F Sbjct: 663 LTDSQGKTVDFRNTVIIMTSNVGAREIAQDASVGFGTTGEQGLTSSEIKGRAMGELKRLF 722 Query: 637 TPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYD 696 PE NR+D+I+ F LS + + ++ + +L+ +L G++++++ A + + +G D Sbjct: 723 RPELLNRIDDIVVFQKLSGENLTKIAHLLVDDLRQRLIANGMNIKLTDAAYDKIVAEGTD 782 Query: 697 RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 GARP+ R IQ ++ PL+ ELL G +G V + K ++G + Sbjct: 783 LTNGARPLRRAIQKLIEDPLSEELLAGEWGEGDTVLCDVADGKFVFSHGTGEIPAPRPAG 842 Query: 757 A 757 A Sbjct: 843 A 843 >UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPJ8_9FIRM Length = 794 Score = 734 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 301/792 (38%), Positives = 436/792 (55%), Gaps = 69/792 (8%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 + +LN A A H ++ EH+L L + A L V ++ + Sbjct: 6 FTDKANDALNCALTCAMSMGHTYVGSEHILYGLCGSNGGVAYTVLRQSGVTCNSIASRIN 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 A I + P + + T +R+L+ AV +++G+ ++L AI + E Sbjct: 66 ALIGKGLP-----TQLTVSDFTPRSRRILESAVMIARNAGKTAAGTDHILRAIMRDNECY 120 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A+ L + +S V++ + TQ + P + N + + + NL L Sbjct: 121 ASVFLHEMGISGEAVLD-------QGADTQKNTPQGKRN---GSVLPSALSGYGRNLTML 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G IDP GRE+E R I++L RR KNNP LVGE+GVGKTAIAEGLA +I G+VP+ Sbjct: 171 AQEGKIDPCFGRERETNRVIEILLRRSKNNPCLVGEAGVGKTAIAEGLAMKIAGGNVPDE 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + IY LDI S+LAG KYRGDFE+R K + ++ D N I+FIDEIH I+GAGAA G Sbjct: 231 LKTKKIYMLDITSMLAGAKYRGDFEERLKRVFDEIRNDGNIIVFIDEIHNIVGAGAAEGA 290 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP+L+ G+IR+IG+TT E+ EKD AL RR Q + + EP+ EETV I+N Sbjct: 291 -IDAANILKPMLARGEIRLIGATTNAEYKKYIEKDPALERRLQPVTVNEPTEEETVTILN 349 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM------- 412 GL+ +YE++H V+ T +A+ AAV L+V+YINDR LPDKAID+IDE A+ RL Sbjct: 350 GLRCRYESYHKVKITDEAISAAVGLSVRYINDRFLPDKAIDLIDEGSAKIRLSRSGEDSV 409 Query: 413 -----------------------------------PVSKRKKTVNVADIESVVARIARIP 437 T+ DI VV + IP Sbjct: 410 GKKLKKLSDEKIRAINNKDFALALKLREQEKTLCANNGGYTATLTADDIADVVTQYTGIP 469 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 + L L L V GQ+KA+ A+ A++ R+GL EH+PVGSF+F G T Sbjct: 470 VRYNGNDTTKWLACLEKTLSENVIGQEKAVRAVANAVRRGRSGLSDEHRPVGSFIFLGTT 529 Query: 498 GVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 GVGKT+ +L+KAL L+RFDMSEY E+H+VS+LIGAP GYVG++ GG LTD V Sbjct: 530 GVGKTKCCKELAKALFGTEKALIRFDMSEYSEKHSVSKLIGAPAGYVGYEDGGRLTDRVR 589 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET-- 612 K P++V+L DEIEKAHPDVF+ILLQV+D+G LTD+ GR DF N V++MT N G Sbjct: 590 KSPYSVVLFDEIEKAHPDVFDILLQVLDDGRLTDSGGRTVDFTNTVIIMTGNIGSALIAK 649 Query: 613 ERKSIGLIHQDNSTD----AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVE 668 + +G Q + E++K F PEF R+D ++ F+ LS + +K + E Sbjct: 650 GKSRLGFGIQQRQEEISGLVKGELEKYFRPEFLGRVDEVVVFNELSCAEYKLICEKMLSE 709 Query: 669 LQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 L Q +++G++ S+ L + R GARP+A++I N++ +++ ++ G G Sbjct: 710 LSKQCERQGIAFSWSERLSEKLCAEAKSRNEGARPIAKLIDKNVRNMISDGIISGEFSTG 769 Query: 729 GQVTVALDKEKN 740 + + + + Sbjct: 770 DGIYADIADDDS 781 >UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 Length = 746 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 338/739 (45%), Positives = 500/739 (67%), Gaps = 6/739 (0%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 L++ + + A+ AR +HE+ T EH+L A L P + +E+C ++ ++++L + Sbjct: 3 LDKIVNEIITAAYNEARYCKHEYFTPEHVLYAALFFPEGIDIIESCGGNVKNIKRDLLQY 62 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + E+++ T+ Q +L A HV ++ + + ++ ++I+ E++S A+ Sbjct: 63 FNDNI----ETTEKKEPLETIGLQNILTSAGEHVLAAEKEVIKLGDIFISIYDEEQSFAS 118 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQP-NSEEQAGGEERMENFTTNLNQLA 180 + LRK + R+D++N+I+HG + + S+ EE + +F +L Q A Sbjct: 119 FFLRKQGIRRIDILNYITHGISATMFDYNIEEDSKYLVDEEDTQSVLNIGDFAVDLTQKA 178 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 ++G +DPLIGRE + R IQVL RR KNNP+ VGE GVGKTAI EGLA IV+ VP ++ Sbjct: 179 KMGDMDPLIGREDIIYRTIQVLSRRNKNNPIHVGEPGVGKTAITEGLAKLIVENKVPNLL 238 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 D IYSLD+GS+LAGTKYRGDFE R K LK+++++ I++IDEIHTIIGAG+ SGG Sbjct: 239 KDSKIYSLDMGSILAGTKYRGDFEDRIKNTLKKIQKEDKPIVYIDEIHTIIGAGSVSGGS 298 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DAAN++KP L+SGKI+ IGSTTY E+ IFEKDRALARRFQ+I++ EPS+E+T I++G Sbjct: 299 LDAANILKPFLTSGKIKFIGSTTYDEYKKIFEKDRALARRFQRIEVPEPSVEDTYSILSG 358 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 +K YE H+V Y +A+++AV+L+VKYINDR LPDKAIDVIDE GA RL +K Sbjct: 359 IKEHYEKFHNVIYKEEALKSAVDLSVKYINDRFLPDKAIDVIDETGAYVRLHSSDDKKIV 418 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 ++ IE +A +A+IPE+++SQ + LK+L LK VFGQ++AI++L AIK +RAG Sbjct: 419 IDKVHIEKTIAAMAKIPEQTLSQDETKVLKDLDKVLKKKVFGQEEAIDSLVRAIKRSRAG 478 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 ++K V S LF GPTGVGKTE++ QL+KAL I +RFDMSEY E+HTV+RL+G+PPGY Sbjct: 479 FNEDNKTVASLLFVGPTGVGKTEISKQLAKALNIPFIRFDMSEYQEKHTVARLVGSPPGY 538 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+++GGLLTD + K P+ VLLLDEIEKAHPDV NILLQ+MD TLTDN G+K DF+N Sbjct: 539 VGYEEGGLLTDVIRKTPYCVLLLDEIEKAHPDVLNILLQIMDYATLTDNTGKKTDFKNTT 598 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAM-EEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 ++MT+NAG R + +G + DA+ EE+ +IF+PEFRNRLD+II+F+ ++ + + Sbjct: 599 IIMTSNAGARSVGKALMGFGERIVKKDAISEEVNRIFSPEFRNRLDDIIYFNSMNDKMAY 658 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719 V K + + + QL K + + V+ + WL++KG GAR + R++Q ++K ++ Sbjct: 659 LVAKKVVGQFEKQLLSKDIKINVTDKCYRWLSKKGVSLEYGAREIIRIVQQDIKPYFVDK 718 Query: 720 LLFGSLVDGGQVTVALDKE 738 +LF ++ + ++ + Sbjct: 719 VLFNDNIENTISIIDVEND 737 >UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XML9_9HELI Length = 756 Score = 730 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 326/746 (43%), Positives = 494/746 (66%), Gaps = 14/746 (1%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +++EL + L A A++ HE++T+EH+ ALL N + L+ C ++ ++++++ + Sbjct: 4 ISKELNVVLQNAQKEAKDKGHEYLTLEHIFYALLENEKITKTLQDCGGNVEIMKKQIQRY 63 Query: 62 IEQTTPVLP-ASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 ++Q P E+ Q TL+ RV++ + HV+ S R + +++L AI E+++ Sbjct: 64 LKQFLQSYPERQEQGAMPQETLAVTRVIEIMIGHVKGSQRQQAQVSDLLAAILEEEKAFC 123 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A +L ++RL+V+ +I+ E + + +E E +E + TNL Q+A Sbjct: 124 AQILNAQGITRLNVLEYITEN---QENFSFNKSIKEEVKDEGEKRESALEAYCTNLTQMA 180 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G I+PLIGRE E+ R +VL R++KNNPLLVGE GVGKTA+AEGLA +++ P + Sbjct: 181 REGKIEPLIGREVEIRRCFEVLLRKKKNNPLLVGEPGVGKTAVAEGLALQMIATQSP--L 238 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + +Y L++G+L+AGTKYRGDFEKR K L ++ + N ILFIDEIH +IGAGA + G Sbjct: 239 ENTEMYMLNMGALVAGTKYRGDFEKRIKTLTDEVLELGNVILFIDEIHMLIGAGATNSGS 298 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+NL+KP+L +GK+R IG++TY E+ + +KD+AL+RRF KI++ EPS EE++ I+ G Sbjct: 299 MDASNLLKPMLGNGKLRCIGASTYAEYRSFLDKDKALSRRFAKIEVKEPSREESILILEG 358 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 +K YE +H+V + ++A+ V+L++++++DR LPDKAID++DE GA +L S + Sbjct: 359 VKKHYEKYHNVSFNSEAIELIVDLSIRHLHDRFLPDKAIDIMDEVGASYKLDGKSGK--- 415 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V++ I+ +VA +A+IPE ++ D+ LK L LK +FGQD AI + A+K +AG Sbjct: 416 VSLQSIKKMVATMAKIPEIEATKDDKAVLKGLEKHLKSRIFGQDNAIVEVVSALKRNKAG 475 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 LG +KP+GSFLF+GP+GVGKTE+ +L+KAL I R DMSEYMER + S+LIGA GY Sbjct: 476 LGAPNKPIGSFLFSGPSGVGKTELAKELAKALNINFERLDMSEYMERISSSQLIGAAAGY 535 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+++GG+LT+ + K+PH +LLLDE+EKAHPDV N+ LQVMD G LTDNNG DF +V+ Sbjct: 536 VGYEKGGILTEMIKKNPHTLLLLDEVEKAHPDVLNVFLQVMDYGRLTDNNGESIDFSSVI 595 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L++T+N G +E +G QD + IK F+PEFRNRLD II F+ LS I + Sbjct: 596 LILTSNVGSKEA--PVLGF-KQDTNLRFSSAIKDHFSPEFRNRLDAIIAFNPLSHKEILK 652 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +VDK IV+L Q+ +K V + + + ++ +LA+ G+D +GARP+ VIQ +K L++ + Sbjct: 653 IVDKNIVDLNNQILEKKVEIILDKSSKEYLAKIGFDVELGARPLGLVIQKEIKNILSDAM 712 Query: 721 LFGSLVDGGQVTVALDKEKNELTYGF 746 LFG L GG K K LT+ F Sbjct: 713 LFGELSKGGVAHFTCVKGK--LTHKF 736 >UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogaceae RepID=A7HJU2_FERNB Length = 741 Score = 729 bits (1881), Expect = 0.0, Method: Composition-based stats. Identities = 286/744 (38%), Positives = 443/744 (59%), Gaps = 26/744 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + L +R + EH+LL +L N A + L +VD ALR+++E Sbjct: 8 FTENAQEILQSVNDVLNRYRQNQLAPEHILLTMLENTKTAAVDILTFLNVDTDALRRDVE 67 Query: 60 AFIEQTTPVLPASEEE-RDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 I + T +V+ A + G +V ++L+A+ E+ Sbjct: 68 RIISSKGGYYYSGSGGTNQIYITPDTTKVINEAKREAKRMGDEKVGTDHLLLAMAIVPET 127 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 LL K+ V++ + + I + ++ + + FT NL + Sbjct: 128 TTYRLLSKYGVTQDALYSAIKQLRMQRTYSEEE-------------NIDILAKFTENLTE 174 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 +A+ G + P++GRE E+ R I++L R+ KNNP+L+G+ GVGKTAI EGLA RIV DVPE Sbjct: 175 MAKNGQLMPVVGRENEINRMIEILGRKIKNNPVLIGDPGVGKTAIVEGLAQRIVNKDVPE 234 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + TI LD+ L+AGTK+RG+FE+R K L+ L++ T+ ILFIDE+HT++GAGAA G Sbjct: 235 FLKNKTILKLDLARLVAGTKFRGEFEERLKKLIDVLKKRTDVILFIDELHTVVGAGAAEG 294 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA N++KP L+ G +RVIG+TT +E+ EKD+ALARRFQ I + EPSIEET++I+ Sbjct: 295 A-LDAGNILKPELARGTLRVIGATTVEEYRKHIEKDKALARRFQVIFVPEPSIEETIEIL 353 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK K+E H+V + KA+ A +++ +YI DR LPDKA+D++DEA ARA++ K Sbjct: 354 KGLKAKFEEFHNVSISDKAIEFAAKMSARYITDRFLPDKAVDLVDEAAARAKI----DGK 409 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 K + DI SV+ R IP + +++ +KNL + Q++A++ ++ AIKM+R Sbjct: 410 KEIVEEDIASVIERWTGIPVGKIMGDEKEKIKNLEKIIHEKFVDQEEAVKIVSNAIKMSR 469 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIG 535 AG+ + +P+G FLF GPTGVGKTE+ +L+ L L+R DMSEYME+H+V+RLIG Sbjct: 470 AGIRNPKRPLGVFLFLGPTGVGKTELAKRLADVLFGSEKALIRIDMSEYMEKHSVARLIG 529 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGYVG+++GG LT+ V + P++V+L DEIEKAHP+VFN+LLQ+ D+G LTD G D Sbjct: 530 APPGYVGYEEGGQLTEQVRRRPYSVVLFDEIEKAHPEVFNVLLQLFDDGRLTDGKGTTVD 589 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 FRN +++MT+N G + EE++K F PE NR+D + F L Sbjct: 590 FRNTIIIMTSNIGSDVIMQDIEEGFEDLIPRHIEEEMRKYFRPELINRIDAAVVFKPLKK 649 Query: 656 DVIHQVVDKFIVELQVQL--DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + I ++++ + EL +L K + + + + R +LA +GY +MGARP+ R+ ++ ++ Sbjct: 650 EHIKEIIEIYTKELNERLIDSDKDIKVVLDESMREYLATEGYVPSMGARPLRRLFENTVE 709 Query: 714 KPLANELLFGSLVDGGQVTVALDK 737 LA ++ + +G V ++ Sbjct: 710 FKLAELIIDEKVKEGQTVKFIWEE 733 >UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogaceae RepID=A5IMI3_THEP1 Length = 791 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 286/799 (35%), Positives = 461/799 (57%), Gaps = 77/799 (9%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEA 60 ++ + + +R ++ EH+LLA+L + E L+ +VD+ L+ E+E Sbjct: 8 TEKAQKVMMSIQDIMTRYRQNQLSSEHILLAILEEGNNVGVELLKELNVDINRLKDEVEV 67 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 FI + +P T + V+++A + G +++ ++++ + +S A Sbjct: 68 FIGKYGVRVPEGASVSQIFITPDARHVIEKAREEARRMGDSKIGTEHLILGMVLSPDSTA 127 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 +L ++ V+ V I + ++A E + FT +L QLA Sbjct: 128 FRILSRYGVTPERVYEAIRKIRSTGK-------------TDEAENVEALARFTMDLTQLA 174 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R + P++ REKE+ R IQ+L RR KNNP+L+G+ GVGKTA+ EGLA RIV+G VP + Sbjct: 175 REKKLMPVVDREKEIRRVIQILSRRTKNNPVLIGDPGVGKTAVVEGLAQRIVEGKVPLFL 234 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASGG 299 + + LD+G L+AGT++RGDFE+R K LL +L+ + ILFIDE+HT++GAGAA G Sbjct: 235 RNVRVLKLDMGRLVAGTRFRGDFEERLKRLLDELKRKKGEVILFIDEVHTVVGAGAAEGA 294 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L++G+I++IG+TT +E+ EKDRAL RRFQ + + EP++E+T++I+ Sbjct: 295 -LDAANIMKPELTTGEIQIIGATTVEEYRKYIEKDRALERRFQPVIVEEPTVEQTIEILK 353 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR--------- 410 GL+ +E HH V+ T A+ A +L+ +YI +R LPDKA+D+IDEA A R Sbjct: 354 GLRKVFEEHHHVKITDDALETAAKLSARYITNRFLPDKAVDLIDEAAAYVRLESSYPSEE 413 Query: 411 --------------------------------------------LMPVSKRKKTVNVADI 426 K + V+ + Sbjct: 414 LLKLEEEIKNLEEKINDAVVKGEYEEAAKLKVELQRLKNEYEEKRKKQEKVEPVVDENVV 473 Query: 427 ESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 +V + IP + +S+R+ L L + + + Q++A++ + I+ AR G+ + + Sbjct: 474 ARIVEQWTGIPVSRIMESEREKLLKLEEFIHQRLVNQEEAVKIVARTIRRARVGIKNPRR 533 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGF 543 P+G FLF GPTGVGKTE+ L+ L ++R DMSEYME+H+V+RLIGAPPGYVG+ Sbjct: 534 PIGVFLFLGPTGVGKTELARTLADVLFGSEDAMIRLDMSEYMEKHSVARLIGAPPGYVGY 593 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 ++GG LT+AV K P++V+LLDEIEKAHPDVFNILLQV ++G LTD G DFRN +++M Sbjct: 594 EEGGQLTEAVRKRPYSVILLDEIEKAHPDVFNILLQVFEDGRLTDGKGNTVDFRNTIIIM 653 Query: 604 TTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVD 663 T+N G + S + E++ F PEF NR+D I++F L+ + + ++V+ Sbjct: 654 TSNIGSEKILEMS----ENGVRIEIERELRNTFKPEFLNRIDAIVYFKPLTMEEVKKIVE 709 Query: 664 KFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFG 723 + +LQ L +K +S+E+++ A+++LAE GY ++GARP+ R+I+ L+ +A+++L G Sbjct: 710 IMVRQLQEILKEKNISIELTERAKDYLAEAGYVPSLGARPLRRIIELELESMIADKILEG 769 Query: 724 SLVDGGQVTVALDKEKNEL 742 + +G +V V D+ ++ Sbjct: 770 EIKEGDRVLVDADEYGLKI 788 Score = 42.8 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 2/62 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 + + + A AR + EHL+L ++ +P +A L V + + + Sbjct: 87 ITPDARHVIEKAREEARRMGDSKIGTEHLILGMVLSPDSTAFRILSRYGVTPERVYEAIR 146 Query: 60 AF 61 Sbjct: 147 KI 148 >UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic n=354 Tax=cellular organisms RepID=CLPC_PEA Length = 922 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 287/827 (34%), Positives = 455/827 (55%), Gaps = 89/827 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++ + +A AR H F+ E +LL L+ + A + L++ ++L R E+E Sbjct: 95 FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVE 154 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + + + T +RVL+ + + G N + ++L+ + E E Sbjct: 155 KIIGRGSGFV-----AVEIPFTPRAKRVLELSQEEARQLGHNYIGSEHLLLGLLREGEGV 209 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L ++ + + + ++ GS +E + TNL +L Sbjct: 210 AARVLENLGADPTNIRTQVIRMVGESADSVTATVGSG----SSNNKTPTLEEYGTNLTKL 265 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP++GR+ ++ER Q+L RR KNNP L+GE GVGKTAIAEGLA RI GDVPE Sbjct: 266 AEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPET 325 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + +LD+G L+AGTKYRG+FE+R K L+++++Q + ILFIDE+HT+IGAGAA G Sbjct: 326 IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGA 385 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G+++ IG+TT E+ EKD L RRFQ + + EP+++ET+QI+ Sbjct: 386 -IDAANILKPALARGELQCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETIQILK 444 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELA-----VKYINDR-----------------HLP-- 395 GL+ +YE HH +RYT +A+ AA +L+ +++ D+ LP Sbjct: 445 GLRERYEIHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLQHAQLPEE 504 Query: 396 -------------------------------DKAIDVIDEAGARAR--------LMPVSK 416 DK +D+ + A + Sbjct: 505 AKELDKEVRKIVKEKEEYVRNQDFEKAGELRDKEMDLKAQISALIEKGKEMSKAETETAD 564 Query: 417 RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM 476 V DI+ +V+ IP VS + D L + D L + GQD+A++A++ AI+ Sbjct: 565 EGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRR 624 Query: 477 ARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRL 533 AR GL + ++P+ SF+F+GPTGVGK+E+ L+ ++R DMSE+MERHTVS+L Sbjct: 625 ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 684 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 IG+PPGYVG+ +GG LT+AV + P+ V+L DEIEKAHPDVFN++LQ++++G LTD+ GR Sbjct: 685 IGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT 744 Query: 594 ADFRNVVLVMTTNAGVRETER--KSIGLIHQDNSTD---------AMEEIKKIFTPEFRN 642 DF+N +L+MT+N G E+ + IG + D EE+K+ F PEF N Sbjct: 745 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 804 Query: 643 RLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 RLD +I F L+ + ++ D + E+ +L K + L+V++ R+ + ++GY+ + GAR Sbjct: 805 RLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGAR 864 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 P+ R I L+ +A ++L + +G V V +D + + S Sbjct: 865 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGKVIVLNGSSG 911 >UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteria RepID=A4FF35_SACEN Length = 838 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 298/811 (36%), Positives = 449/811 (55%), Gaps = 79/811 (9%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 ++ Q+ + L A AR H+ + H+L A + RE LE VD + ++ Sbjct: 40 LMTQKTQELLAGAADYARGLGHDDLDALHVLWAATKEATTREMLEGVQVDPDTFAETVQR 99 Query: 61 FIEQTTPVLPASEEERDTQP--TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 LPA+ E P T + ++VL A ++ G + +VL+A+ + +S Sbjct: 100 -------QLPAAREAASRAPALTPAGRKVLVDAYQVARALGSTYIGPEHVLLAMSASPDS 152 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 +A LL + + + G R+ S+ + + E+ G ++ + +L Sbjct: 153 EAGRLLASAGATPEE-FRVSAGGARR------SEAATGQATAERDSGTPTLDKYGQDLTA 205 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR G +DP++GR E+E+ I+VL RR KNNP+LVGE+GVGKTAI EG+A RI G VP Sbjct: 206 RARDGELDPVVGRADEIEQTIEVLSRRTKNNPVLVGEAGVGKTAIVEGIAQRIADGQVPH 265 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAAS 297 V+ I LD+ S+LAGT+YRGDFE+R ++ ++ + I+FIDE+HT++GAG A Sbjct: 266 VLTGKRIVQLDLSSMLAGTRYRGDFEERMTKVIDEISANSGEVIVFIDELHTLVGAGGAE 325 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G VDA N++KP L+ G++ V+G+TT E+ EKD AL RRFQ + + EPS+E+T+++ Sbjct: 326 GA-VDAGNMLKPRLARGELHVVGATTLDEYRKNIEKDAALERRFQPVQVPEPSVEDTIEV 384 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 ++ L+ +Y HH VRYT +AV AA L+ +YI DR LPDKAID++D+AGAR RL V Sbjct: 385 LDRLRDRYAEHHRVRYTDEAVAAAARLSDRYIADRFLPDKAIDLLDQAGARKRLSVVGPS 444 Query: 418 K------------------------------------------------KTVNVADIESV 429 V +DI V Sbjct: 445 ADELEQRIQRLEREKDRSVADEDYERASALRDEIGVAQAELEANRDAGVPEVTESDIAEV 504 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 V+R +P +++ +R L+NL L V GQD A+ AL A++ +R+G+G+ ++PVG Sbjct: 505 VSRATGVPVSRLTEQERTRLRNLEGELHRRVIGQDDAVRALARAVRRSRSGVGNANRPVG 564 Query: 490 SFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 SFLF GPTGVGKTE+ L++ L ++R DMSE+ ERH +RLIGAPPGYVG+ + Sbjct: 565 SFLFLGPTGVGKTELAKALAETLFGDEDRMIRLDMSEFQERHNAARLIGAPPGYVGYGEA 624 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G LT+AV + P++V+LLDE+EKAHPDVFN LLQV+++G LTD GR DF N V++MT+N Sbjct: 625 GELTEAVRRRPYSVVLLDEVEKAHPDVFNTLLQVLEDGRLTDGQGRTVDFTNTVVIMTSN 684 Query: 607 AGVRETERKSIGLIHQDNSTDA--------MEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 G KS GL +A M +K+ F PEF NR+D ++ F L+ + + Sbjct: 685 LGSEVISSKSGGLGFSAAQDEADESLHDRLMPRLKEAFRPEFLNRIDEVVVFRKLTAEQL 744 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 H + D + + +L + + A + +AE+G+ GARP+ R I+ ++ +A+ Sbjct: 745 HDIADLLLDGTRKRLAAMEIGIGFDDAAVDLIAERGHQPEFGARPLRRTIERDVDDRIAD 804 Query: 719 ELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 +L G L G V V + +LT+ Sbjct: 805 LVLDGELEAGSAVHVGV--RDGQLTFEVTQR 833 >UniRef50_P37571 Negative regulator of genetic competence clpC/mecB n=137 Tax=Bacteria RepID=CLPC_BACSU Length = 810 Score = 722 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 295/818 (36%), Positives = 456/818 (55%), Gaps = 85/818 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + L +A A H + EH+LL L+ A +AL+A + +++E+E Sbjct: 6 FTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + I + E + T ++V++ ++ + G + V ++L+ + E E Sbjct: 66 SLIGRG------QEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGV 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L VS + +E GS +++ +L + Sbjct: 120 AARVLNNLGVSLNKARQQVLQLLGSNE------TGSSAAGTNSNANTPTLDSLARDLTAI 173 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ +DP+IGR KE++R I+VL RR KNNP+L+GE GVGKTAIAEGLA +I+ +VPE+ Sbjct: 174 AKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEI 233 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D + +LD+G+++AGTKYRG+FE R K ++ ++ Q N ILFIDE+HT+IGAG A G Sbjct: 234 LRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGA 293 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA+N++KP L+ G+++ IG+TT E+ EKD AL RRFQ I + +PS++E++QI+ Sbjct: 294 -IDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQ 352 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YEAHH V T A+ AAV+L+ +YI+DR LPDKAID+IDEAG++ RL + Sbjct: 353 GLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPN 412 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV----------FGQDKA--- 466 + V + +S +L++ RL+ V GQ+ + Sbjct: 413 LKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVT 472 Query: 467 ---------------IEALTEA----------IKMARA-------------------GLG 482 + + + I +R GL Sbjct: 473 VDDIAMVVSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLK 532 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPG 539 +P+GSF+F GPTGVGKTE+ L++++ + ++R DMSEYME+H+ SRL+G+PPG Sbjct: 533 DPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPG 592 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+D+GG LT+ V + P++V+LLDEIEKAHPDVFNILLQV+++G LTD+ GR DFRN Sbjct: 593 YVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNT 652 Query: 600 VLVMTTNAGVRETER-KSIGL-------IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 +L+MT+N G E +R K +G H+D M E+K+ F PEF NR+D II F Sbjct: 653 ILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFH 712 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L + ++V +L +L ++ +S+E++ A+ +AE+G D GARP+ R IQ + Sbjct: 713 SLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKH 772 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 ++ L+ ELL G++ G + LD E E + Sbjct: 773 VEDRLSEELLRGNIHKGQ--HIVLDVEDGEFVVKTTAK 808 >UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ClpA n=1 Tax=Treponema denticola RepID=Q73KU3_TREDE Length = 785 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 327/766 (42%), Positives = 482/766 (62%), Gaps = 37/766 (4%) Query: 5 ELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQ 64 + A A++ HEF+T EHLL A++ NP A E DL + L ++E Sbjct: 8 TVRRIFQDAVEDAKKRNHEFVTPEHLLWAIMFNPKALELFTLSGSDLGYIHDNLNTYLEN 67 Query: 65 TTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLL 124 PV + Q T+ Q V +RA+ + ++ + + +++V++ E+++ ++ + Sbjct: 68 KVPVRTQDNQAEPIQ-TVGLQNVFERAILNCNAAEKPVIGINDIIVSLMDEEKNHCSFFM 126 Query: 125 RKHEVSRLDVVNFIS--------------------HGTRKDEPTQSSDPGSQPNSEEQAG 164 ++ + RL ++ +S + + + + N+++ Sbjct: 127 KQSGIDRLRLLQLVSSPDFYDDGKNRSAYEEAEDVQEAQGVKEDSARHNSEEKNTDKSKA 186 Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 + +E FT NL + AR G + P+IGRE+E+ER IQ+LCR++KNNP+ VG +GVGKTAI Sbjct: 187 QKTYLERFTVNLTEKARKGRLSPIIGREEEIERTIQILCRKQKNNPIHVGGAGVGKTAIT 246 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFI 284 EGLA RI VP + + IYSL + LLAG K+RGDFE+R K ++ ++ ++ N+ILFI Sbjct: 247 EGLAQRITANKVPSFLKNANIYSLSLSDLLAGAKFRGDFEERLKRIVSEISREKNAILFI 306 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DEIHTI+ A + GG ++A +L+KP+L++GK+R IG+TT++E++ F KD ALARRFQKI Sbjct: 307 DEIHTIVNA-NSGGGGIEAPDLLKPILANGKVRCIGATTFEEYNKHFTKDAALARRFQKI 365 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 DI EP+ EE V+I+ GL+ YE H V Y+ + + +AV L+ +I DR LPDKAID+IDE Sbjct: 366 DIEEPNEEEAVKILKGLRESYENFHKVHYSDEVLESAVHLSAIHIRDRFLPDKAIDLIDE 425 Query: 405 AGARARLMPVSKRK--------------KTVNVADIESVVARIARIPEKSVSQSDRDTLK 450 AGA ++ ++ V+++DI+ +VA+ A+IPE+ VS ++ + L+ Sbjct: 426 AGALIKIRADKEKNENEADEKGLEETALPEVSLSDIDKIVAKTAKIPEQRVSVNETEKLR 485 Query: 451 NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK 510 + + L +FGQD AIE +T+A+K +RAG + KPV +FLF GPTGVGKTE+ L++ Sbjct: 486 HFEEILSKKIFGQDTAIEGVTKAVKRSRAGFRSKDKPVANFLFVGPTGVGKTELAKTLAE 545 Query: 511 ALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH 570 LGI LLRFDMSEY E+HTVSRLIG+PPGYVGF++GGLLT AV K P+AVLLLDEIEKAH Sbjct: 546 ELGIPLLRFDMSEYQEKHTVSRLIGSPPGYVGFEEGGLLTSAVQKSPNAVLLLDEIEKAH 605 Query: 571 PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM- 629 D++NILLQ+MD TLTDN GRKA F N++L+MT+NAG + IG + S A+ Sbjct: 606 ADIYNILLQIMDYATLTDNQGRKAAFNNIILIMTSNAGSSNIGKPLIGFGGERISESAVD 665 Query: 630 EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNW 689 E ++K FTPEFRNRLD II F L+ V+ ++ K + +++ QL +K +SLE+ + Sbjct: 666 EAVEKTFTPEFRNRLDAIIKFGPLTMQVMSLIIKKEVEKIRSQLAEKEISLELEDDVIPL 725 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 LAEKGY GAR AR+++D PL + +LFG G V + Sbjct: 726 LAEKGYSEEFGARNAARLVEDEFVTPLTDMILFGETKKGSSVKCQI 771 Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 13/130 (10%) Query: 81 TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISH 140 +L+ +R+ Q AV + VT ++L AI + A L + + ++ Sbjct: 6 SLTVRRIFQDAVEDAKKRNHEFVTPEHLLWAIMFNPK--ALELFTLSGSDLGYIHDNLNT 63 Query: 141 GTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQ 200 P ++ D ++P + G + E N N P+IG + I Sbjct: 64 YLENKVPVRTQDNQAEP--IQTVGLQNVFERAILNCNAAE-----KPVIG----INDIIV 112 Query: 201 VLCRRRKNNP 210 L KN+ Sbjct: 113 SLMDEEKNHC 122 >UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FG52_SACEN Length = 768 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 289/760 (38%), Positives = 436/760 (57%), Gaps = 38/760 (5%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L+++ ++ A E + HLL A+ L V + L + Sbjct: 16 LLDEQAHEVVSKAIRATVEWGSRELDSAHLLWAVTQVGPTARMLGDSGVRVEELASAVRT 75 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + + + S +R L A S G + V +VL+ + ++ +S A Sbjct: 76 VAGTYDAL--GGQAQGKPVLSSSARRALLGAHQQALSEGADAVGARHVLLGLATDADSVA 133 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 L R E ++ + P ++P +++ F ++ +LA Sbjct: 134 GRALA-----------------RAMERSERTRPNARP---SVLSTTPKLDEFGMDMTELA 173 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G +DP++GR +E+E+A++VL RR KNNP+ +G+ GVGKTAI EGLA RIV G VP + Sbjct: 174 RAGRLDPVVGRSQEVEQAVEVLGRRTKNNPVFIGDPGVGKTAIVEGLAQRIVDGAVPWSL 233 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL-FIDEIHTIIGAGAASGG 299 A + SLD+ ++AG KYRG+FE+RF+ L+ ++ Q + +L FIDEIH I+GAGA G Sbjct: 234 AGRRVVSLDLAGMVAGAKYRGEFEQRFRDLMNEIRQHRDEVLVFIDEIHGIVGAGAGE-G 292 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA ++KP L+ G+++V+G+TT +E+ EKD AL RRFQ I + EPS+ +TV ++ Sbjct: 293 TMDAGTMLKPALARGEVQVVGATTVEEYRKHIEKDPALERRFQPILVAEPSVGDTVAVLR 352 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL-------- 411 GL+ +Y+ HH V A+ AA L+ +YI DR LPDKA+D++D+A +R RL Sbjct: 353 GLRDRYQLHHRVVIADDALVAAARLSQRYIADRFLPDKAVDLLDQACSRVRLLRGGSPND 412 Query: 412 -MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 ++ + +V D+ VV+R IP ++ +D+ L L L+ V GQD A+ ++ Sbjct: 413 PGSSAEHQPSVGRDDVADVVSRRTGIPVSDLTAADKQRLLGLEKVLRSKVIGQDAAVRSV 472 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMER 527 EA++ ARAGL +P+GSFLF GPTGVGKTE+ L++AL + L+RFDM E+ E+ Sbjct: 473 AEAVRRARAGLADPERPIGSFLFLGPTGVGKTELARALARALFGDAQRLIRFDMGEFQEK 532 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 HTVSRLIGAPPGYVG+ + G LTD V + P++VLLLDE+EKAHPDVFN LLQ++D G L+ Sbjct: 533 HTVSRLIGAPPGYVGYGESGQLTDRVRRQPYSVLLLDEVEKAHPDVFNTLLQLLDEGRLS 592 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 D GR DFRNVV++MT+N G G D++ + +EE++ F PEF NR+D++ Sbjct: 593 DAQGRSVDFRNVVVIMTSNIGADRILDA--GGSAGDSALELLEELRSFFRPEFINRIDDV 650 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 F L + ++ + QL +G+ +EV++ A WLAE+G+ GARP+ RV Sbjct: 651 TVFQPLGPAALREITGLLLERTYQQLLARGIGMEVTEAAVAWLAERGHQPEFGARPLRRV 710 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 IQ L LA ++ G L G +V V E L + Sbjct: 711 IQRELDNRLAAMVIDGELSSGHRVLVDAVGEDLVLEVSVE 750 >UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI000198575F Length = 923 Score = 721 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 286/839 (34%), Positives = 444/839 (52%), Gaps = 82/839 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + ++ + A+ + +HLLL L++ + + + + R + + Sbjct: 81 FTERAIKAVIFSQREAKALGRNMVFTQHLLLGLVAEDRSLDGFLGSGITIDDARDAVRSI 140 Query: 62 ---------IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAI 112 I + D ++S +RV + A+ + ++ G N + ++ + + Sbjct: 141 WHDYNDSSIISGIPSSQTSVASSTDVPFSISTKRVFEAAIEYSRTMGYNFIAPEHIAIGL 200 Query: 113 FSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAG-------- 164 F+ + A +L++ + + + + S+P + + Sbjct: 201 FTVDDGSAGRVLKRLGANVNHLAAVAVSRLQGELAKDGSEPSATFKGMQGKSFSGKAAIV 260 Query: 165 -------GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESG 217 + + F +L A G IDP+IGR+ E++R +Q+LCRR KNNP+L+GESG Sbjct: 261 KSSGKKKEKSALAQFCVDLTARATDGLIDPVIGRDMEVQRVVQILCRRTKNNPILLGESG 320 Query: 218 VGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD 277 VGKTAIAEGLA I + DVP + I SLDIG L+AGTK RG+ E R L+ + + Sbjct: 321 VGKTAIAEGLAISIAEADVPSFLLTKRIMSLDIGLLMAGTKERGELEARVTTLISDILKS 380 Query: 278 TNSILFIDEIHTIIGAG----AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEK 333 N ILFIDE+H ++G+G G +D A+L+KP L G+++ STT E+ +FEK Sbjct: 381 GNIILFIDEVHMLVGSGIAGRGNKGSGLDIASLLKPSLGRGQLQCFASTTIDEYVKLFEK 440 Query: 334 DRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH 393 D+ALARRFQ + I EPS EE V+I+ GL+ KYEAHH R+T +A+ AAV L+ +YI DR Sbjct: 441 DKALARRFQPVLINEPSQEEAVRILLGLREKYEAHHKCRFTLEAINAAVHLSARYIPDRR 500 Query: 394 LPDKAIDVIDEAGARARLMPVSKR------------------------------------ 417 LPDKAID+IDEAG++AR+ ++ Sbjct: 501 LPDKAIDLIDEAGSKARMEAYKRKKEKQTSVLLKSPDDYWQEIRAVKAMHEMMIMSMTLS 560 Query: 418 ----KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 V +I V + + IP + ++ +R L L ++L+ V GQD AI +++ A Sbjct: 561 PWIIPIVVGPNEIAVVASLWSGIPVQQITADERMLLVGLHEQLRKRVVGQDNAIASISRA 620 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTV 530 +K +R GL ++P+ + LF GPTGVGKTE+ L+ ++R DMSEYME+H+V Sbjct: 621 VKRSRVGLKDPNRPIAAMLFCGPTGVGKTELAKALAACYFGSEAAMVRLDMSEYMEQHSV 680 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 S+LIG+PPGYVG+ +GG LT+A+ + P V+LLDEIEKAHPD+FNILLQ+ ++G LTD+ Sbjct: 681 SKLIGSPPGYVGYGEGGTLTEAIRRQPFTVVLLDEIEKAHPDIFNILLQMFEDGHLTDSQ 740 Query: 591 GRKADFRNVVLVMTTNAGVRETER---KSIGLIHQDNSTD--------AMEEIKKIFTPE 639 GR+ FRN ++VMT+N G + SIG D+ MEE+K F PE Sbjct: 741 GRRVLFRNALVVMTSNVGSAAIAKGRQSSIGFSIADDEPTSYAGMKALVMEELKAYFRPE 800 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAM 699 NRLD I+ F L + ++++ + E++ +L G+ +EVS + L ++GYD+ Sbjct: 801 LLNRLDEIVVFHPLEKAQMLEILNTMLQEVKERLSSLGIGMEVSVSVIDLLCQQGYDKNY 860 Query: 700 GARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 GARP+ R + ++ PL+ LL G V LD N + + H ++ A+ Sbjct: 861 GARPLRRAVTLIIEDPLSEALLTEEYQPGDIAVVDLDASGNPFVRKQSNRRIHLSDTAY 919 >UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMJ0_FIBSS Length = 838 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 316/817 (38%), Positives = 476/817 (58%), Gaps = 87/817 (10%) Query: 18 REHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEEE 75 R + +TVEHLL L+ S A E L+A V+L L + ++ + ++ + Sbjct: 24 RNLGSDCVTVEHLLFGLVREDSGVASETLKALKVNLTELSETIQRALSTNGGLMTVGGDS 83 Query: 76 RDTQPTLSFQ--RVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLD 133 T + Q VL A + G + ++++AI + +S AA L + V+ + Sbjct: 84 HGGLLTFTGQCKAVLYNAAKIAKEEGVQFIGPEHLMLAILQQTDSPAAATLSTYNVTFEN 143 Query: 134 VVNFISHGTRK--DEPTQSSDPGSQPNSE---------EQAGGEERMENFTTNLNQLARV 182 + R+ +P P +P + +E+F +L +AR Sbjct: 144 YQEMLMQIKRQADGQPMDEGQPEDEPRERYTQTRQANPQSRSKTPILEHFGRDLTAMARA 203 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 G +DP+IGRE E+ER IQ+LCRR+KNNP L+GE GVGKTAI EGLA +IVQ +P+++A+ Sbjct: 204 GKLDPIIGREAEIERLIQILCRRKKNNPALIGEPGVGKTAIIEGLALKIVQRKIPDLLAN 263 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN-SILFIDEIHTIIGAGAASGGQV 301 + +LD+ +++AGTKYRG FE+R K L+ +L++ N ILFIDE+HTI+GAG + G + Sbjct: 264 KRVVTLDVAAMVAGTKYRGQFEERVKGLIMELQRVGNSVILFIDELHTIVGAGGSE-GSL 322 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DA+N+ KP L+ G+++ IG+TT+ E+ EKD AL RRFQ I + P++E+++QI+ GL Sbjct: 323 DASNIFKPALARGELQCIGATTFDEYRKYIEKDPALERRFQTIIVNPPTVEDSIQILEGL 382 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTV 421 +PKYE HH+V YT AVRAAVEL +YI++R LPDKAIDV+DEAGAR RL + + Sbjct: 383 RPKYEQHHNVHYTPDAVRAAVELGERYISERFLPDKAIDVLDEAGARVRLNSIKIPQDLQ 442 Query: 422 NV--------------------------------------ADIESVVARIARIPE----- 438 N+ + + + + P Sbjct: 443 NMEDELGVCLQKKEEAVANQDYTSAAQLRAREEELQNSIAERKKQLQSEESETPVVDDNV 502 Query: 439 -------------KSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + + + L +LGD +K V GQD+A++A+ ++I+ +RAG+ + Sbjct: 503 IRDVISKMTGIPVRRLGGEEAQKLIHLGDEIKQRVIGQDQAVDAIVKSIRRSRAGIRNNK 562 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+GSFLF GPTGVGKTE+ L K L L+R DMSEYME+H+VSRLIGAPPGYVG Sbjct: 563 RPMGSFLFLGPTGVGKTELAKVLCKELFGSEDSLVRIDMSEYMEKHSVSRLIGAPPGYVG 622 Query: 543 FDQ-GGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 F+ GG L++ V KHP++V+LLDEIEKAHPD++N+LLQ++D+G LTD+ GRK +F+N ++ Sbjct: 623 FEDGGGQLSEKVRKHPYSVVLLDEIEKAHPDIYNLLLQILDDGILTDSYGRKINFKNTII 682 Query: 602 VMTTNAGVRETERKS-IGLIHQDNSTD-------AMEEIKKIFTPEFRNRLDNIIWFDHL 653 +MT+NAG RE S +G + D EE+K++F+PEF NR+D I F L Sbjct: 683 IMTSNAGAREVRHSSGMGFTKMGETDDYERMETAIREEVKRVFSPEFLNRVDEQIVFRAL 742 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 S + VVD + LQ L +G+ LE+SQEA+ ++ YD ++GARP+ R IQ+ ++ Sbjct: 743 SKKDLVSVVDIQMGFLQKNLSDRGILLEMSQEAKEFVVNHNYDASLGARPIRRSIQNLVE 802 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 +A LL G++ D + V + E +L++ + + Sbjct: 803 DEIAEGLLLGTMTDFSTIYVGV--ENGKLSFKCEKIK 837 >UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=59 Tax=Firmicutes RepID=Q046D3_LACGA Length = 838 Score = 716 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 300/812 (36%), Positives = 469/812 (57%), Gaps = 77/812 (9%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEA 60 + + L +A +A+ H + EH+LLAL+ +N A + L +V +R+E+E Sbjct: 22 SDSAKNVLEIAKEQAQNFHHRIIGTEHVLLALVIEANGDAGKLLRERNVTPTLVREEIER 81 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + +S + + + VL A G ++ ++L+ + + + A Sbjct: 82 YTGYG-----SSPKATYMEMSPRLSLVLNFAKQKSDELGTPQIETKHILLGLLASDQILA 136 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSS--DPGSQPNSEEQAGGEERMENFTTNLNQ 178 + +L+ V D+ I+ D ++ D S +++ ++ + NLN+ Sbjct: 137 SLILKNIGVEPRDLSQDINDSFMDDSGEANNIFDVSSATRTKKGKSLTPNLDKVSVNLNK 196 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR G IDP+IGR+KE++R IQ+L RR KNNP+LVGE GVGKTA+A+G+A IV +VP+ Sbjct: 197 RAREGAIDPVIGRDKEIKRVIQILSRRTKNNPVLVGEPGVGKTAVAQGIASAIVNREVPD 256 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 +A + +LD+GSL+AGTKYRG+FE R K +LK++++D + ILF+DE+HT+IGAG A G Sbjct: 257 NLAKKRVMALDMGSLIAGTKYRGEFEDRMKKILKEIQRDGSVILFVDEMHTLIGAGGAEG 316 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA+N++KP L+ G I++IG+TT+ E+ EKD+ALARRFQ++ I EPS EETV I+ Sbjct: 317 A-IDASNILKPSLARGDIQMIGATTFDEYQKYIEKDQALARRFQQVKIGEPSKEETVDIL 375 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GL+PKYE H+V+ +A++ AVE + +YI +R LPDKAID+IDEA A ++ V K Sbjct: 376 KGLRPKYEKFHNVKIEDEAIKDAVEFSTRYIANRFLPDKAIDLIDEASAAVKIQAVGKAD 435 Query: 419 KT------------------------VNVADIESVVARIARIPEKSV------------- 441 V A + ++ + +K + Sbjct: 436 PRLTKLDTQINDVIHQKEEAAENQNFVQAAKLRDEENKLTQDRDKLIARVENKNSKKSIV 495 Query: 442 --------------------SQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 +S+ L +L L V GQDKAI A++ AI+ +R+G+ Sbjct: 496 DSNKIAQIVSEWTGVPVTRMKKSETKRLAHLESILHERVIGQDKAISAVSRAIRRSRSGI 555 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPP 538 E++P+GSFLF GPTGVGKTE+ L+ A+ ++R DMSEYM++ S+LIG+ P Sbjct: 556 KDENRPIGSFLFLGPTGVGKTELAKALAAAVFGSERNIIRVDMSEYMDQVATSKLIGSAP 615 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+++GG L++ V ++P++V+LLDE+EKAHPDVFN+LLQV+D G LTD+ GRK DFRN Sbjct: 616 GYVGYEEGGQLSERVRRNPYSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRN 675 Query: 599 VVLVMTTNAGVRETER-KSIGLIHQDNSTDAME------EIKKIFTPEFRNRLDNIIWFD 651 +++MT+N G R + K++G + + ++ +K+ F PEF NR+D + FD Sbjct: 676 TIIIMTSNLGSRSLQEDKTVGFAADNEDKNKLQQEKVTAAVKQFFRPEFLNRIDETVVFD 735 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L+ + ++V L +L +K V+L++S A + LA+ G+D MGARP+ R IQ Sbjct: 736 SLTKKQLREIVSLMTSHLISRLARKEVTLKISPAALDVLAKDGFDPEMGARPLRRAIQHE 795 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 L+ +A +L+ + G V V + K + T Sbjct: 796 LEDVIAEDLISEKIKAGQTVKVGAHQGKLKFT 827 >UniRef50_C7HWH6 Negative regulator of genetic competence MecB/clpC n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7HWH6_9FIRM Length = 803 Score = 715 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 308/819 (37%), Positives = 460/819 (56%), Gaps = 83/819 (10%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELE 59 M N +L A + H+++ VEHLLLAL+ S A +ALE + LR + Sbjct: 1 MENNKLNRLTGQARRESYSLSHDYIGVEHLLLALMKTGSLATKALEEAGANYELLRSIVI 60 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + V PA E +++ RA Q + + ++L+AI ++ +S Sbjct: 61 NNIGKGSAVRPAKEYSN------KVRQIFDRARLFAQKRKKVSASEEDILLAILNDDDSF 114 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + + + + + + +++ + +S E ++ F NLN++ Sbjct: 115 TNLMFMLSGLDKKIIRDNLIRLQNEEKSSNTS-----------NNLSENLKKFAKNLNEM 163 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G IDP+IGRE E+ER IQ+L RR KNNP+L+G+ GVGKTAI EGLA RIV G VP V Sbjct: 164 AEAGKIDPVIGREDEVERVIQILLRRTKNNPILIGDPGVGKTAIIEGLAQRIVDGKVPFV 223 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 M + TI SLD+ S++AGTKYRGDFE R K L +LEQ + +LFIDE H ++GAGA+ G Sbjct: 224 MKEKTIVSLDLASMIAGTKYRGDFEDRLKKLFGELEQREDVVLFIDEFHMVLGAGASE-G 282 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP+L+ G I++IG+TT E+ EKD+AL RR Q + + EP+ ++T++II Sbjct: 283 SMDAANILKPILAKGDIQIIGATTIDEYRKHVEKDQALTRRMQPVHVEEPNKDDTIKIIE 342 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLK KYE HH V T +A++AAV+L+ +YI DR LPDKAIDVIDEA ++ R+ + K Sbjct: 343 GLKDKYEDHHKVEITGEAIKAAVDLSQRYIQDRFLPDKAIDVIDEACSKERIKNYKENKD 402 Query: 420 TVNVADI----------------------------------------------------E 427 V+ +I Sbjct: 403 QVSNKEILDGLIEEKNQAINEQNFEKAASLRDQINEAREKLEKEKEEKKTDLKISFDEVA 462 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 +V+ +++P +++ ++ +L LK V GQDKAI+ ++ AIK AR GL KP Sbjct: 463 KIVSSWSKVPITKLTEDEKQKYMDLDIDLKKEVIGQDKAIDKISHAIKRARVGLKDPKKP 522 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 +GSF+F GPTGVGKT + L+K L L+R DMSEYME+ VSRL+G+PPGYVG++ Sbjct: 523 IGSFIFVGPTGVGKTYLAKSLAKNLFGDMDNLIRMDMSEYMEKFAVSRLVGSPPGYVGYE 582 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 +GG LT+AV KHP++V+L DEIEKAHPD+FN+LLQ++D+G LTD GR DF+N +++MT Sbjct: 583 EGGQLTEAVRKHPYSVILFDEIEKAHPDIFNLLLQILDDGRLTDGQGRTVDFKNTIIIMT 642 Query: 605 TNAGVRETERKS-IGLIHQDNSTD--------AMEEIKKIFTPEFRNRLDNIIWFDHLST 655 +N GV + IG D + + IK F PEF NRLD+II F+ L Sbjct: 643 SNVGVSSLNQNPKIGFGTGDVEKEIDDSNKEIINKAIKNAFAPEFLNRLDDIIMFNSLDK 702 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 + I ++ + E + +L G+ + ++ + L+E G+ + GARP+ R I + + Sbjct: 703 NAIKEITKILLDETKERLKNLGIEINYNKRVVDLLSEGGFSKEYGARPLERHITNKIDNQ 762 Query: 716 LANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKA 754 LA E+L G L ++ + + + K + ++ Sbjct: 763 LAEEILEGKLSKDMKINLTVKEGKINFANKKEKIKEEIP 801 >UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFH5_9HELI Length = 763 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 324/775 (41%), Positives = 479/775 (61%), Gaps = 41/775 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 LN L + RH+ +T+EH +L NP RE +EA + L L A+ Sbjct: 4 LNSTLSNIFQKTLHFVEDMRHDVLTIEHAFYVMLENPLGRELVEATGANTKILMDSLGAY 63 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 +E+ P A +E T +F RV + H +++ + V + VA+ E++ A Sbjct: 64 LEKHIPKGRALKELEAPHQTPAFMRVFDHMISHAKNAQKASVGIGDFFVALMQEEDCYCA 123 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 LL+ + DV+ + D + E+ + ++E + NLNQLA Sbjct: 124 RLLKAQGIQIEDVMRIVV------------DFDEHVSREKTKDSQSQLEKYAKNLNQLAI 171 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G IDPLIGR+ E+ + QVLCRR+KNNP+L+GE+GVGK+AI EGLA RIV+ VP + Sbjct: 172 EGKIDPLIGRDLEINQIAQVLCRRKKNNPMLIGEAGVGKSAIVEGLALRIVERSVPAKLL 231 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 + IY++D+ S++AGTKYRG+FE R K +L ++E+D N I+F DEIH I+GAG ++ G + Sbjct: 232 NNVIYAVDVSSVVAGTKYRGEFETRIKKILAEVEKDKNIIIFFDEIHMIVGAGQSNSGGM 291 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 D +NL+KP+L+SG++R IG+TT ++ N F+KD+ALARRF +I + EPS EE + I+ + Sbjct: 292 DFSNLLKPMLASGRLRCIGATTSHDYKNSFDKDKALARRFTQIKVEEPSEEECLLILEKI 351 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP-------- 413 P YE H+V Y +A++A V L+ KYI +RHLPDKAID++DEAGA+A+L Sbjct: 352 APLYEKFHNVTYENEAIKACVSLSSKYITERHLPDKAIDLMDEAGAKAQLNEFLCNDERK 411 Query: 414 ----------------VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 + K + IES++A I IP+ +++ + LKNL +LK Sbjct: 412 SETLEKLTKTKKTKKDSKTQHKIITKEHIESLMASITNIPKSTINADESMLLKNLESKLK 471 Query: 458 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELL 517 +F QDKAIE + E IK+ +AGLG H+P+ SFLF GP+GVGKTE++ +L+K LGI+ Sbjct: 472 KRIFSQDKAIEKIVEKIKINKAGLGELHRPIASFLFTGPSGVGKTELSKELAKILGIKFE 531 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 R DMSEY E H++S+LIG+P GYVG+++GGLL + + +PH VLLLDEIEKAH DV+NIL Sbjct: 532 RIDMSEYAESHSISKLIGSPAGYVGYEEGGLLINKIRINPHCVLLLDEIEKAHSDVYNIL 591 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFT 637 LQ+MD+ TLTDN KADF+NV+L+MT+NAG +E S+G + M IK F+ Sbjct: 592 LQIMDSATLTDNQNNKADFKNVILIMTSNAGSKE--GNSVGFLDTSEHRVGM-AIKDTFS 648 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDR 697 PEFR+RLD II F L + + ++ K+I +L L +K ++L +S +A ++A++ D+ Sbjct: 649 PEFRSRLDAIIPFMPLGVNELQKIAQKYITDLNETLKEKHITLNLSTKAAQFIAQQSIDK 708 Query: 698 AMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKH 752 A+GAR + + I +K PL+N +LFG L GG + + + N L + Q ++ Sbjct: 709 ALGAREIKKTIDSAIKLPLSNAMLFGELRKGGVAHINV--KNNTLVFDIQKQRQE 761 >UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mamiellales RepID=A4S065_OSTLU Length = 781 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 292/740 (39%), Positives = 428/740 (57%), Gaps = 20/740 (2%) Query: 14 FARAREHRHEFMTVEHLLLALLSN-PSAREALEACSVDLVALRQELEAFIEQTTPVLPAS 72 A++ R EH+LLAL N +AL V A R+ L + L Sbjct: 1 MDLAKKFRSAECGSEHVLLALTRNRDRTSKALHKHGVTEEATRRALGERAGVSELELMNP 60 Query: 73 EEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRL 132 + + L+ L++ +SG +EV + +A+ E S A + E L Sbjct: 61 FNKPSAEGLLALSDELKKVFERASASG-SEVGSKELALAMIDEPASGARATMAALEGCDL 119 Query: 133 DVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGRE 192 V+ RK+ + + + ++ + + + +L AR G +DP++GR+ Sbjct: 120 KVL-------RKEITGANERELVGAGKKTRNTKKQTLADCSIDLTAEAREGKLDPVLGRD 172 Query: 193 KELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS 252 +E+ R +++L RRRK+NP LVGE GVGKTAIAEGLA I +GDVPE + + + SL IG Sbjct: 173 EEVTRVMRILVRRRKSNPCLVGEPGVGKTAIAEGLAMMIAKGDVPESLKEKRVVSLQIGL 232 Query: 253 LLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII-GAGAASGGQVDAANLIKPLL 311 LLA TKYRG+FE++ K ++++++Q + ILF+DEIH ++ G G +DA NL+KP L Sbjct: 233 LLADTKYRGEFEEKMKNVMEEVKQAGDIILFVDEIHMLVGAGGTGEDGGMDAGNLMKPAL 292 Query: 312 SSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDV 371 + G+++ IG+TT E+ EKD AL RRFQ + + EPS E+T+ I+ GLK Y+ HH V Sbjct: 293 ARGELQCIGATTIDEYRKHIEKDAALERRFQPVRVIEPSPEQTLTILRGLKDTYQEHHGV 352 Query: 372 RYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVA 431 +T +A+RAAV L+ +YINDR LPDKAIDVIDEAGA +L P V+ + I VVA Sbjct: 353 SFTDEALRAAVSLSTRYINDRFLPDKAIDVIDEAGALVQLTPGDSTL--VDESHITEVVA 410 Query: 432 RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 + +P + +S + +L N L V GQ +A+ ++++AI+ ARAGL KPV S Sbjct: 411 QWTGVPVQQLSADESLSLMNFEQELGKRVIGQVEAVRSISQAIRRARAGLADASKPVASI 470 Query: 492 LFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 +F+GPTGVGKTE+ +++ ++R DMSEYME H+VSRLIG PPGY+GF +GG Sbjct: 471 IFSGPTGVGKTELAKAVAQTYFGAEKAMVRIDMSEYMESHSVSRLIGPPPGYIGFGEGGQ 530 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT+AV +PH+++LLDEIEKAHPDVFNILLQV+++G LTD+ GR DF N +LVMT+N G Sbjct: 531 LTEAVRTNPHSLVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFTNAMLVMTSNIG 590 Query: 609 VRETERKSIGLIHQDNS-----TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVD 663 RE G + T E+ K + PEF NRLD II F L + + D Sbjct: 591 SREILESMSGEGEDEEKYKKLQTQVKRELGKEYRPEFLNRLDEIIIFRPLERPEVSAIAD 650 Query: 664 KFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFG 723 + + + +G++L+ + ++ L G+ GARPM R ++ L+ LA +L G Sbjct: 651 LMLASVSKRALARGITLDFTDSFKSLLYSNGFSPRFGARPMRRCVRGLLENNLAECMLDG 710 Query: 724 SLVDGGQVTVALDKEKNELT 743 G V D ++ ++ Sbjct: 711 FASSGDTVNFDYDDDQELIS 730 >UniRef50_C9KP02 Negative regulator of genetic competence ClpC/MecB n=3 Tax=cellular organisms RepID=C9KP02_9FIRM Length = 840 Score = 713 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 311/828 (37%), Positives = 456/828 (55%), Gaps = 80/828 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 ++ A ARE +++ EH+LL LL A AL+A + A+ Q +E Sbjct: 7 FTSRAIKAIEFAQYAARELEQDYIGTEHILLGLLHEEGSVAFAALQAAGLTFDAVMQRVE 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 A + A + T +RV++ AV Q+ G N + ++L+++ E E Sbjct: 67 AMVAGD-----AEYPSDNPYYTPRAKRVMEGAVEEAQTLGHNYIGTEHILLSLLEETEGA 121 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA LL V + + P +P S+ + + ++ + NLN + Sbjct: 122 AAELLIGMGVDIDALQGEVLDRIDHPHPEGDGEP-SRAEKAKGRQAPQLIKKYGRNLNDM 180 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ +DP+IGR+KE++R IQ+L RR KN P+L+GE GVGKTAIAEGLA RIV+G VP + Sbjct: 181 AKEDRMDPVIGRDKEIQRVIQILARRTKNTPILLGEPGVGKTAIAEGLAQRIVEGSVPYM 240 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D + SL + SL+AG KYRG+FE+R K L+ ++ QD ILFIDE+HT++GAGAA G Sbjct: 241 LQDKKVVSLSLASLVAGAKYRGEFEERLKGLIDEVRQDGTIILFIDEMHTLVGAGAAEGA 300 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP LS G+I++IG+TT E+ EKD AL+RRFQ I + EPSIE+ +I+ Sbjct: 301 -LDAANILKPALSRGEIQIIGATTLDEYKKHLEKDAALSRRFQTILVEEPSIEDAKKILM 359 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKY----------------------INDRHLPDK 397 GL+ KYEA H A+ AAV L+ +Y + P+K Sbjct: 360 GLRGKYEAFHCAHIEDAAIEAAVRLSHRYITDRFLPDKAIDLMDEAASKVRMKQVAQPEK 419 Query: 398 -----------------AIDVIDEAGA-----------------RARLMPVSKRKKTVNV 423 AI D A + R K + TV Sbjct: 420 LQEIRARLEKLGVEKEAAISAQDYERAARIRDDEQKVKDELEEAKRRFEKRGKSRITVTA 479 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 DI VVA+ +P + ++ + D L ++ L V GQ +A+EA+++AI+ ARAGL Sbjct: 480 DDIADVVAQWTGVPVRQIAAKESDRLLHMEKILTRRVVGQQEAVEAVSKAIRRARAGLKD 539 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGY 540 +P+GSFLF GPTGVGKTE+ LS+AL ++RFDMSEYME++ VSR++GAPPGY Sbjct: 540 PKRPIGSFLFLGPTGVGKTELAKALSEALFGTEDAIIRFDMSEYMEKYAVSRMVGAPPGY 599 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+++GG LTDAV + P++++LLDEIEKAHPDVFN+LLQV+D+G LTD GR DFRN V Sbjct: 600 VGYEEGGQLTDAVRRKPYSIILLDEIEKAHPDVFNVLLQVLDDGRLTDGKGRTVDFRNTV 659 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTD------------AMEEIKKIFTPEFRNRLDNII 648 ++MT+NAG ++ + L S D + E++ IF PEF NR+D +I Sbjct: 660 IIMTSNAGATLLKKSAPALGFAVGSGDEKQEAEDAAKKRVLGEVRHIFKPEFLNRIDELI 719 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F L + + +++D + +++ +L +K + LEVS A+N L EKG D GARP+ R I Sbjct: 720 VFHPLGREELSKIIDILLRDVRTRLAEKEIRLEVSPAAKNVLVEKGTDFKYGARPLKRAI 779 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 Q ++ +A LL G + V + K + + ++ Sbjct: 780 QKLIEDEIAEHLLARDFKRGDTIQVRKNGAKLDFVRKETEKDRKDSKE 827 >UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ClpA n=11 Tax=Bacteroides RepID=A6KY28_BACV8 Length = 742 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 329/741 (44%), Positives = 466/741 (62%), Gaps = 10/741 (1%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 + + A ++A ++RHEF+T EHLL ALL ++AL C L Q + ++ Sbjct: 6 TDSVNYAFASAQSQAMQYRHEFITPEHLLSALLEQVPFQKALAECFCTPEELSQSISEYL 65 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 + +P E E + + + +LQ A + S E+ +++ + ++S A Y Sbjct: 66 SKKVERVP-QEIEYELEISGQLSELLQYAYMTISHSSAEEMDVPHLVQGMLQLEDSWAGY 124 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 LL++ D+ F+S E + E+ E N+ T LN+ + Sbjct: 125 LLKE--TVGEDMPEFLSSLISNYEHMNQFQEETSSEQEKS----EPWRNYVTCLNEGLQD 178 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 +PLIGR ELER IQVLCR+ KNNPL VGE GVGKTA+ GLA RI G+VPE + Sbjct: 179 R--NPLIGRNVELERTIQVLCRKEKNNPLHVGEPGVGKTALVYGLAARIEAGNVPERLTG 236 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 C IY LD+G+LLAGT+YRG+FEKR KA+++ + ++ ++I++IDEIH +IGAG G +D Sbjct: 237 CRIYELDLGNLLAGTQYRGEFEKRLKAIMEGIRKEGHAIVYIDEIHNLIGAGRTGDGSMD 296 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 A+N++KP L G+IR IGSTTY+EF+ F + R L RRFQ+IDI EP IEET+ I+ GLK Sbjct: 297 ASNMLKPYLEGGEIRFIGSTTYEEFNRYFSRSRGLVRRFQQIDIQEPGIEETIHIVEGLK 356 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 +YE H V Y + AV A +YI+DR LPDKAID++DEAGA + P +TV+ Sbjct: 357 ERYETFHGVVYEEGVIAYAVTAAARYISDRFLPDKAIDLVDEAGAYREIHPTDTETQTVD 416 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 A I ++ARI ++ ++ + D TL+ L +R+ ++GQ++A+ + EA++MA+AGL Sbjct: 417 KALITDILARICKVDVLAMKEEDNATLETLHERISAKIYGQEEAVCQVVEAVQMAKAGLL 476 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVG 542 E+KP+ S LF GPTGVGKTEV L+ LGI L RFDMSEY E+HTV++LIG+P GY+G Sbjct: 477 DENKPLASLLFVGPTGVGKTEVAKVLASELGIALQRFDMSEYTEKHTVAKLIGSPAGYIG 536 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 ++ GGLLTDA+ K P+ VLLLDEIEKAHPD+FNILLQVMD LTDN GRKAD R+V+L+ Sbjct: 537 YEDGGLLTDAIRKTPNCVLLLDEIEKAHPDIFNILLQVMDYAVLTDNKGRKADCRHVILI 596 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAM-EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 MT+NAG + + SIG Q + +AM +++KK F PEF NRL + F + + + Sbjct: 597 MTSNAGAQFAHQASIGFSGQITAGEAMLKQVKKTFKPEFINRLSATVVFHDMDYGMASLI 656 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 ++K + EL+ +L + V +E+S EA L + G+ + GAR M RVI LK L E+L Sbjct: 657 LNKKLNELKNKLSARHVGMELSPEAYKHLLKLGFTKEYGAREMDRVITSQLKPLLMREIL 716 Query: 722 FGSLVDGGQVTVALDKEKNEL 742 FG+L GG+V V + L Sbjct: 717 FGTLKTGGKVRVTAGNGELSL 737 >UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Treponema pallidum RepID=B2S440_TREPS Length = 809 Score = 708 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 351/791 (44%), Positives = 505/791 (63%), Gaps = 51/791 (6%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +++ +++ L+ AF AR+ RHE++T EH+L + L++P+A E + CS D+ + L Sbjct: 4 IISASVQIILDQAFDLARKRRHEYITAEHVLFSALAHPAALEIINLCSADIALIHSNLSE 63 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F++ PV + +L FQ +L+RAV + +++ ++ + ++LV++ + + A Sbjct: 64 FLKTQVPV----DLSHTPSQSLGFQHLLKRAVLYCEANKKSALEVGDLLVSLLQAETNYA 119 Query: 121 AYLLRKHEVSRLDVVNFISH--------------GTRKDEPTQSSDPGSQPNSEEQAGGE 166 +Y +R +S ++ I+ ++ ++S D G G Sbjct: 120 SYYMRMSGMSTARLIEVIARVNGIRHGDKNVSMGSNAQERYSESDDVGESAGHGPPLDGT 179 Query: 167 E----------------------------RMENFTTNLNQLARVGGIDPLIGREKELERA 198 E +E +T NL + AR G + PLIGR +E+ER Sbjct: 180 EGDGNTADVHVHYEHCAHKRTDADTHRYTVLEKYTVNLTERARRGELAPLIGRTQEIERT 239 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 IQ+LCRR+KNNP+ VGE+GVGKTAI EGLA RIV+ DVPE + I+SLD+ SLLAGTK Sbjct: 240 IQILCRRQKNNPVHVGEAGVGKTAITEGLAQRIVRCDVPEALEGVEIFSLDMTSLLAGTK 299 Query: 259 YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRV 318 +RGDFE+R K L ++LE+ T +ILFIDEIHT++G G+ G +DA+NL+KPLLSSGKIR Sbjct: 300 FRGDFEERLKRLAEELEKKTQAILFIDEIHTVVGTGSGGSGGLDASNLLKPLLSSGKIRC 359 Query: 319 IGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAV 378 IGSTTY+E++ F KD+ALARRFQKIDI EPS EET++I+ G++ YE H V Y+ +A+ Sbjct: 360 IGSTTYEEYTKHFRKDQALARRFQKIDIEEPSEEETLRILEGIRTLYEDFHAVHYSDEAL 419 Query: 379 RAAVELAVKYINDRHLPDKAIDVIDEAGARAR----LMPVSKRKKTVNVADIESVVARIA 434 AAV L+V+YI RHLPDKAID+IDEAGA A+ + +DI+ +VA+IA Sbjct: 420 AAAVRLSVQYIQGRHLPDKAIDIIDEAGACAKLSRGKHGTEGVCSVIGESDIDEIVAKIA 479 Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 +IP++ VS S+ + L+N + +FGQ +AI+ +T +K AR GL +HKP+ + LF Sbjct: 480 KIPKQRVSASEIEKLRNFERSISEKIFGQGEAIDLVTRTLKRARVGLRVKHKPIANLLFV 539 Query: 495 GPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 G TGVGKTE+ L++ LGI L RFDMSEY E+HTVSRLIG+PPGYVGF++GGLLTDAV Sbjct: 540 GATGVGKTELARTLAQELGIVLHRFDMSEYQEKHTVSRLIGSPPGYVGFEEGGLLTDAVR 599 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 K PHAVLLLDEIEKAHPD+FN+LLQVMD TLTDN GRKADFRNV+L+MT+NAG R Sbjct: 600 KQPHAVLLLDEIEKAHPDIFNVLLQVMDYATLTDNQGRKADFRNVILIMTSNAGARNMGV 659 Query: 615 KSIGLIHQDNSTDAM-EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL 673 IG T + E +++IF+PEFRNRLD +I FD LS + + ++ K + + QL Sbjct: 660 SLIGFHKGQVGTAVIDEAVERIFSPEFRNRLDAVIRFDALSLETMERIARKELALVCEQL 719 Query: 674 DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 +K + +++ +A LAE+ + GAR +AR+++ + LA+ +LFG + +G + Sbjct: 720 QKKHIRFDITDDALALLAERSHSGGSGARNVARLVEQEVANVLADLMLFGGVAEGDALRC 779 Query: 734 ALDKEKNELTY 744 + + + Sbjct: 780 TVKDRHAQCNF 790 >UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=45 Tax=root RepID=CLPC_GUITH Length = 819 Score = 705 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 283/801 (35%), Positives = 450/801 (56%), Gaps = 88/801 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++ + +A AR H F+ E +LL L+ + A + L++ V+L R E+E Sbjct: 5 FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDARVEVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + + + T +RVL+ ++ + G N + ++L+ + E E Sbjct: 65 KIIGRGSGFV-----AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGV 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L + V + +++ ++ G +E F +NL Q Sbjct: 120 AARVLENLALDLTKVRTQVIRLLGDTAEVSATNGQTK-------GKTPTLEEFGSNLTQK 172 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP+IGR+KE+ER IQ+L RR KNNP+L+GE GVGKTAIAEGLA RI DVP++ Sbjct: 173 AAEGKLDPVIGRQKEIERVIQILGRRTKNNPILIGEPGVGKTAIAEGLAQRINNRDVPDI 232 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D + +LDIG L+AGTKYRG+FE+R K ++ ++ N IL IDE+HT+IGAGAA G Sbjct: 233 LEDKRVVTLDIGLLVAGTKYRGEFEERLKKIIDEIRVANNVILVIDEVHTLIGAGAAEGA 292 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G+++ IG+TT +E+ EKD AL RRFQ + + EPS+EET++I+ Sbjct: 293 -IDAANILKPALARGEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETIEILY 351 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVE-----LAVKYINDRH--------------------- 393 GL+ +YE HH + + +A+ AA + +A +++ D+ Sbjct: 352 GLRDRYEKHHKLVISDEALSAAAKFADQYIADRFLPDKAIDLIDEAGSRVRLMNSQLPPA 411 Query: 394 -------------LPDKAIDVIDE--------------------AGARARLMPVSKRKKT 420 D+A+ D A ++ +K Sbjct: 412 ARELDKELREILKQKDEAVRSQDFETAGQLRDREMEIKAQIAAIAHSKKGDEENTKEVSV 471 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V DI +VA IP +++S+ + L + + L + GQD+A+ A+++AI+ AR G Sbjct: 472 VTEEDIAQIVAAWTGIPVNKMTRSESEKLLQMEETLHGRIIGQDEAVVAVSKAIRRARVG 531 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAP 537 L + ++P+ SF+F+GPTGVGKTE+T L+ ++R DMSEYMERHTVS+LIG+P Sbjct: 532 LKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSP 591 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GG LT++V + P+ V+L DEIEK HPDVFN+LLQ++++G LTD+ GR DF+ Sbjct: 592 PGYVGYNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFK 651 Query: 598 NVVLVMTTNAGVRETER--KSIGLIHQDNSTDAM---------EEIKKIFTPEFRNRLDN 646 N +L++T+N G + E+ +G ++ T++ EE+K+ F PEF NRLD Sbjct: 652 NTLLILTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDE 711 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 II F L+ D + ++ + + E+ ++ +KG+ LEV+ + L +GY+ GARP+ R Sbjct: 712 IIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRR 771 Query: 707 VIQDNLKKPLANELLFGSLVD 727 + L+ L+ E L + + Sbjct: 772 AVMRLLEDTLSEEFLAEKIKE 792 >UniRef50_C9PUC6 ATP-dependent Clp protease subunit n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PUC6_9BACT Length = 753 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 313/733 (42%), Positives = 456/733 (62%), Gaps = 9/733 (1%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 + + + LN A +R+EF+T EHLL+AL + + AL+A D +AL +L+ + Sbjct: 7 SHDTDQVLNGALNYCMLYRNEFVTPEHLLMALTNQDNFSIALDASGGDTLALMAQLDGVV 66 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 + +PA ++ VL A + + ++++ + + + S AAY Sbjct: 67 GK-METMPADWHHV-PDNSVLLSEVLSNAQKLAMMADVETLQVPHLVMGLINLENSDAAY 124 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 LL K + NF++ + T + E + E + T +N + Sbjct: 125 LLNKQL--GENATNFVAELV--ELYTNDARMSFFGGEEGEEEENEPWRSLVTCVNDTYKN 180 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 +PLIGRE+EL+R IQVLCR+ KNNPL VGE GVGKT++ GLA I +GDVP+ + Sbjct: 181 H--NPLIGREEELQRTIQVLCRKEKNNPLHVGEPGVGKTSLVYGLAAMIERGDVPQRLQG 238 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 C +Y +D+G++LAGT+YRGD EKR K ++ L ++ N+IL+IDEIH ++GAG + G +D Sbjct: 239 CRVYQMDMGTMLAGTQYRGDLEKRIKQVMDGLLEEGNTILYIDEIHNLVGAGRSGEGSMD 298 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 A+N++KP L G +R IGSTTY E++ F K + RRFQ+ID+ EP+ EE ++I+NGLK Sbjct: 299 ASNMLKPYLEGGDVRFIGSTTYAEYNRYFAKSAGIVRRFQQIDVPEPTPEEAIKILNGLK 358 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 +YE H+VRY+ + AV + KY+NDRHLPDKAID+IDEAGA ++ P+ +++ V+ Sbjct: 359 GQYEKFHNVRYSPGVIEFAVRASAKYVNDRHLPDKAIDLIDEAGAYRQMHPLPTKRQKVD 418 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 A + V+ ++ ++ ++ + L L R+K ++GQ++A+E +T+AI+ A+AGL Sbjct: 419 KALVSDVLTKVCKVQAVALKDDGNEALLTLEKRMKEQIYGQNQAVELVTQAIQTAKAGLT 478 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVG 542 E KP+ + LF GPTGVGKTEV L+ LGIEL+RFDMSEY E+H V++LIG+P GYVG Sbjct: 479 EEGKPLSAMLFVGPTGVGKTEVARVLAHELGIELVRFDMSEYTEKHAVAKLIGSPAGYVG 538 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 ++ GGLLTDA+ K P+ VLLLDEIEKAH D++NILLQVMD LTDN G+KADFRNVVL+ Sbjct: 539 YEDGGLLTDAIRKIPNCVLLLDEIEKAHADIYNILLQVMDYARLTDNKGQKADFRNVVLI 598 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAME-EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 MT+NAG + + ++G + +AM ++KK F PEF NRL + F + + H + Sbjct: 599 MTSNAGAQFASQANVGFASNVSRGEAMMVQVKKTFKPEFINRLSATVVFRDMDEAMAHLI 658 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 + K I LQ QL + V L + A N+L G+ GAR M RVI LK L E+L Sbjct: 659 LKKKINALQQQLVARNVELTLDAAAENYLLRLGFTPLYGAREMDRVIAAQLKPLLTREML 718 Query: 722 FGSLVDGGQVTVA 734 FG L GG+ V Sbjct: 719 FGKLKKGGKAIVK 731 >UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum RepID=C3KS27_CLOB6 Length = 746 Score = 702 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 264/752 (35%), Positives = 450/752 (59%), Gaps = 28/752 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 LN EL+ L+ A A + H + VE + L N + + L ++D+ L E+ Sbjct: 4 LNNELKQVLSEAKFIAIKFNHTRIEVEDFFIVLAKHKNSNVYKILRLLNIDVKDLINEVV 63 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + + + E + S + ++ +A + + ++L+A+ S+++S Sbjct: 64 SEYKDKNSIRYSQEMLDSIVASDSLKEIIMKASIEAINMKNELIESQHILLAL-SKEDST 122 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 ++ + ++ +S +E +SD E + + +L + Sbjct: 123 LGKKIKNKGIDESKILEGLSKIQFSNEKNYNSDE------------ESFLNKYAIDLTKC 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A + ++GRE EL I++L R+ KNNP+L+GE GVGKTAI EGLA IVQG VP+ Sbjct: 171 ALENKFNMVLGREDELGYVIEILLRKSKNNPVLIGEPGVGKTAIVEGLACLIVQGKVPDE 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASG 298 + + IYSLD+G+L+AG+K+RG+FE+R K ++ +++ ILFIDE+HT++GAG+ Sbjct: 231 LKNKKIYSLDLGALVAGSKFRGEFEERLKKVITEIQNSYGQIILFIDEMHTLVGAGSTD- 289 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA+NL+KP L+ G++ IG+TT +E+ EKD AL RRF+ + + EPSIE+T+ I+ Sbjct: 290 GPMDASNLLKPALARGELHCIGATTIKEYRKYIEKDPALERRFKTVLVEEPSIEKTIHIL 349 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP----- 413 +G+K YE +H+V++ A++AAV L+ +YI++R LPDKAID++DEA AR +++ Sbjct: 350 DGIKNIYEDYHNVKFNRSAIKAAVTLSSRYISERFLPDKAIDLLDEAAARKKIISKVDRD 409 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 S V +DI +V++ +IP + + + L+NL LK V GQ+KA++A++ A Sbjct: 410 NSSDVIEVKKSDIAEIVSKWTKIPVSDLLEDEARKLRNLESHLKKRVIGQNKAVQAVSNA 469 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL---LRFDMSEYMERHTV 530 + +R L + KP+GSF+F GPTGVGKTE+ L+K L ++ +R DMSEY ++ + Sbjct: 470 VIRSRVCLSNPRKPIGSFIFLGPTGVGKTELACNLAKILFNDIDSVIRIDMSEYQDKSML 529 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 +RLIGAPPGYVG+++GG LT+ V P++++LLDEIEKAH D+ NI+LQ++D+G +TD Sbjct: 530 ARLIGAPPGYVGYEEGGQLTEKVRCRPYSIVLLDEIEKAHRDIVNIMLQILDDGRVTDGQ 589 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 GR +FRN +++MT+N G ++ ++ + + +E+ K F+PEF NR+D I F Sbjct: 590 GRTINFRNTIIIMTSNIGSKDILKEDD---EEKLNQKIKKELIKEFSPEFLNRIDESIIF 646 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 LS D + +++ + E QL K + + +++ + + + D GARP+ R IQ Sbjct: 647 KPLSKDSLIKIISLQLREFIAQLQNKNIKVNITENVKLLILDYLEDLQFGARPIRRSIQS 706 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 + P++ +++ G++V+G + + + ++ E+ Sbjct: 707 KIITPISRKIVEGNIVEGDSILIFDNGKEIEI 738 >UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/mecB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8V8_COPPD Length = 805 Score = 699 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 289/807 (35%), Positives = 438/807 (54%), Gaps = 90/807 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELEA 60 ++E +L A AR F+ EHL+LA+L+ + A +++ D +R +E Sbjct: 5 FSEEARKALKDAQEEARRLNSSFVGREHLVLAMLNEDTRAYSIIDSLGADADNIRSSIED 64 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +P + + + + +R+L A + + V ++L+AI E S+ Sbjct: 65 I------PMPMASSLQYPELSSEARRLLDIASEEARKLAHSYVGTEHLLLAILKEP-SRV 117 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 + +L ++ V DV + + G Q E+ ++ F+ +L LA Sbjct: 118 SSILNENGVFYDDVRKKV------------IEMGEQEPEEKGKTKTPVLDKFSKDLVSLA 165 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 G +DP+IGRE EL R I++L RR KNNP+L+GE GVGKTAI EGLA RI G VP + Sbjct: 166 EKGKLDPVIGRETELNRIIEILSRRIKNNPILLGEPGVGKTAIVEGLAERIASGKVPYSL 225 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGG 299 + LDI S++AGTKYRG+FE+R K +L ++++ + ILFIDEIHT+IGAGAA G Sbjct: 226 KKKRVVQLDISSIVAGTKYRGEFEERMKKILDEVKRTNGQVILFIDEIHTVIGAGAAEGA 285 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAA+++KP L+ G+I+VIG+TTY ++ E+D A RRFQ + + EPS+EET QI+ Sbjct: 286 -IDAASILKPSLARGEIKVIGATTYDDYRKYIERDPAFERRFQPVQVEEPSLEETKQILI 344 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHL----------------------PDK 397 GL+P YE H+V+ A+ AA L KY+ R L P Sbjct: 345 GLRPIYEKFHNVKIADDAIEAAAILTKKYVKQRFLPDKAIDALDETCAKVRLANEVLPSN 404 Query: 398 AIDVIDEAGA-------------------------------------RARLMPVSKRKKT 420 ++DE + + + T Sbjct: 405 LRALLDEIENVRLQKQLAIDSQQFEEAAALRDKEKALKEEYSRMEEIWLYERSMDENQPT 464 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ D+ ++ IP + D+ L + D L + GQ++A+ A+ +AI+ +R G Sbjct: 465 VSFDDVAYTISSWTGIPVAKLRLDDKKKLLEIEDYLHRRIVGQNEAVTAVAKAIRRSRTG 524 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAP 537 L + +P+G FLF GPTGVGKTE+ L++ + E L+R DMSEYME+ VSRL+GAP Sbjct: 525 LQDDRRPIGVFLFLGPTGVGKTELARALAEFMFGEEEALIRIDMSEYMEKFNVSRLVGAP 584 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GG LT+AV + PH+++LLDEIEKAHPDVF+ILLQ+ ++G LTD GR DFR Sbjct: 585 PGYVGYEEGGQLTEAVRRKPHSIVLLDEIEKAHPDVFDILLQIFEDGRLTDGQGRVVDFR 644 Query: 598 NVVLVMTTNAGVRETERK-SIGLIHQDNSTD-----AMEEIKKIFTPEFRNRLDNIIWFD 651 N +++MT+N G R+ +IG + + M+ +KK F PEF NR+D I+ F Sbjct: 645 NTIIIMTSNLGSRDISAGTTIGFLKDQVKFENMENLVMDAVKKFFKPEFLNRIDEIVVFH 704 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 HL+ D + Q+V + EL QL + +++++S + + +GY+ GARP+ R IQ Sbjct: 705 HLTNDDLRQIVGIMMDELNKQLRSQNLTVKISDRMLDQIITEGYEPRFGARPLRRAIQRL 764 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKE 738 +K PLA +L + G +D E Sbjct: 765 VKDPLAEYMLKHENISGTLFMDFVDGE 791 >UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RFB8_ANAPD Length = 814 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 293/813 (36%), Positives = 453/813 (55%), Gaps = 87/813 (10%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELE 59 M N L + A + H+++ EHLLLAL+ S A +ALE + R + Sbjct: 1 MENNRLNRLTSQARRESYSLNHDYIGSEHLLLALMKTGSLANKALEKSGANYDLFRSIVI 60 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + PA+E + + + +++ + + V ++L A+ ++ +S Sbjct: 61 NNIGRGNSQRPATEFSKKVRM------IFEKSREIAMARKSSVVNEEDILQALINDDDSF 114 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + + + + + ++ T+ S + E + +T +LN+L Sbjct: 115 TNLMFLLSGLDKKVIGKNLDDMLKEVYKTKGS----------SSKFSENVTKYTNDLNEL 164 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G IDP+IGR+ E+ER +Q+L RRRKNNP+L+G GVGKTAIAEGLA RIV DVP++ Sbjct: 165 AESGKIDPVIGRDTEIERLVQILMRRRKNNPILIGAPGVGKTAIAEGLAQRIVAKDVPKI 224 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D I SLD+ S++AG+KYRGDFE R K L +++ + + ILFIDE H ++GAGA+ G Sbjct: 225 IKDKRILSLDLASMIAGSKYRGDFEDRLKKLFEEIGKRDDVILFIDEFHMVLGAGASE-G 283 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP+L+ G+I+++G+TT +E+ EKD AL+RR Q I + EPS+E+ +II Sbjct: 284 SMDAANILKPILAKGEIQIMGATTIEEYRKHVEKDSALSRRMQPIQVDEPSLEDARKIIQ 343 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI-------------------- 399 GLK KYE HH V T +A+ AAV+L+ +YI+DR+LPDKAI Sbjct: 344 GLKDKYEDHHGVEITDEAIEAAVDLSDRYISDRYLPDKAIDLIDEASSKIRIAAFQKEDD 403 Query: 400 -----DVIDEAGARARLMPVSKRKKT------------------------------VNVA 424 D +++ + + ++ Sbjct: 404 SAPSEDKLEKLNKEKEQAVRDQDFERAAELRDKINQAKFDLEIEKEKEKENKDRLFISYD 463 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI SVVA +++P + +++ + + NL + LK+ V GQ AI+++ +IK AR GL Sbjct: 464 DIASVVANWSKVPVEKLTEDEMEKYANLDEDLKLSVIGQKDAIDSVARSIKRARVGLKDP 523 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYV 541 KP+GSF+F GPTGVGKT + L++ L +L+R DMSEYME+ VSRL+G+PPGYV Sbjct: 524 KKPIGSFIFVGPTGVGKTYLAKTLAQNLFGSEDKLIRMDMSEYMEKFAVSRLVGSPPGYV 583 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+++GG LT+AV +P++V+L DEIEKAHPDVFN+LLQ++D+G LTD GR DF+N ++ Sbjct: 584 GYEEGGQLTEAVRTNPYSVILFDEIEKAHPDVFNLLLQILDDGRLTDGQGRTVDFKNTII 643 Query: 602 VMTTNAGVRETE-RKSIGL--------IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDH 652 +MT+N GVR KSIG + S + IK F PEF NRLD +I F Sbjct: 644 IMTSNIGVRSLSTSKSIGFELGDQKEAEEERTSEIIEKAIKDSFAPEFLNRLDQVIMFKP 703 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 L I ++ + + + +L++ + + Q+ LA++G+D GARP+ R I + Sbjct: 704 LGEAEIGEISGLMLEKTRQRLNEIDLDIVYDQKVVKLLAKEGFDPEYGARPLERHITKMI 763 Query: 713 KKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 LA ++L G L + +++ K+ L + Sbjct: 764 DDRLAEDILDGKLKRDETIRISV--RKDSLVFR 794 >UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 Tax=Bacteria RepID=Q2S2Z0_SALRD Length = 875 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 298/838 (35%), Positives = 460/838 (54%), Gaps = 88/838 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + ++ + A H+++ EHLLL L+ A + L DL+ L++ +E Sbjct: 5 FSNRVRDVISYSREEAVRLGHDYIGTEHLLLGLIREGDGIAVKILRNLGCDLLELKEAVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + T+ T ++VL+ + + + ++L+++ + E+ Sbjct: 65 DTVRSTSSSTSVGN----IPLTKQAEKVLKITYLEAKLYKSDVIGTEHLLLSLLRDDENI 120 Query: 120 AAYLLRK-HEVSRLDVVNFI----------SHGTRKDEPTQSSDPGSQPNSEEQAGGEER 168 AA +L++ V+ V N + S + S Q +SE + Sbjct: 121 AAQILQQGFSVTYDAVRNELDSIISGKASSSSSGSGGSGGRLSSGYGQESSESENSNTPV 180 Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++NF +L +LA +DP+IGRE+E++R Q+L RR+KNNP+L+GE GVGKTAIAEGLA Sbjct: 181 LDNFGRDLTELAEEDELDPIIGREEEIKRVAQILSRRKKNNPVLIGEPGVGKTAIAEGLA 240 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RIV V V+ D I +LD+ SL+AGTKYRG FE+R KA++K+LE + + ILFIDEIH Sbjct: 241 ARIVDRKVSRVLYDKRIVTLDLASLVAGTKYRGQFEERMKAVMKELEDNDDIILFIDEIH 300 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 TI+GAG AS G +DA+N+ KP L+ G ++ IG+TT E+ E D AL RRFQKI + Sbjct: 301 TIVGAGGAS-GSLDASNMFKPALARGDLQCIGATTLDEYRQNIEGDGALDRRFQKIIVDP 359 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 + EETV I++ +K YE HH+VR++ +A+ AV+L+ +YI DR LPDKAIDV+DEAGAR Sbjct: 360 STPEETVNILSNIKSYYEDHHNVRFSEEAIDLAVQLSDRYITDRFLPDKAIDVMDEAGAR 419 Query: 409 ARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV-----FGQ 463 L + + + + + V KS + L++ L+ + Sbjct: 420 VHLSNIEVPPEILELEEQIEDVQEEKNQVVKSQRFEEAARLRDKEKTLQEELEEAKQQWH 479 Query: 464 DKAIEAL----------------------------------------------------T 471 ++A + + Sbjct: 480 EQAETEVHDVTSEEIAEVVAMMTGIPVDKISEPEQQKLLKMEESLKEHVVGQDEAIEKLS 539 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERH 528 +AI+ RAGL KP+GSF+F GPTGVGKTE+ L++ L L+R DMSEYME+ Sbjct: 540 KAIRRTRAGLKDPEKPIGSFIFLGPTGVGKTELAKVLTEYLFDSQESLIRIDMSEYMEKF 599 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 +VSRL+GAPPGYVG ++GG LT+ V + P++V+LLDEIEKAHPDV NILLQV+D+G LTD Sbjct: 600 SVSRLVGAPPGYVGHEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVSNILLQVLDDGILTD 659 Query: 589 NNGRKADFRNVVLVMTTNAGVRETER--KSIGLIHQD--------NSTDAMEEIKKIFTP 638 GR+ DFRN +L+MT+N G ++ + + IG D + + +K +F P Sbjct: 660 GMGREVDFRNTILIMTSNIGTQDIKSFGQGIGFDQTDGEDMDYTSMKSTVQDALKNVFNP 719 Query: 639 EFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRA 698 EF NRLD++I F+ L+ + I ++D +L + ++ G+ LE + A+ +L ++G+D+ Sbjct: 720 EFLNRLDDVIVFNPLNKENIFDIIDIMSEDLFERAEELGLDLEFDEAAKEFLTDRGFDQK 779 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 GARP+ R +Q ++ P+A ++L + +G V + D E EL++ + + E Sbjct: 780 YGARPLRRALQKYVQDPMAEDILHDEITEGDTVLITHDGESEELSFEVEEGEAPTEET 837 >UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Neorickettsia RepID=C6V4H7_NEORI Length = 740 Score = 690 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 284/733 (38%), Positives = 434/733 (59%), Gaps = 10/733 (1%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 M++ LE +L A AR H ++T+EHLLLAL + S++ LR L Sbjct: 1 MISPSLENTLQNALVLARSFSHSYVTLEHLLLALTEDEEVSRIASNSSMNFAKLRDSLIH 60 Query: 61 FIEQTTPVLPASEEERDT---QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQE 117 F+ S D +PTL +RV+QR H + ++TG +VL+ +F EQ+ Sbjct: 61 FLSTAQFFARFSNGCVDIAKIKPTLGLRRVIQRTKIHANIAELGQITGLHVLIELFCEQD 120 Query: 118 SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 S A L + ++ +V +SH R + + + ++ + ++ + T++N Sbjct: 121 SYAFSFLTESNIT---LVELMSHVMRSHKCGSTQSTSTSNTDILRSADLDNLKEYCTDMN 177 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 +LA G ID LI R+KE+ER I++L RR KNNP+ VGE GVGKTAI EGL IV G+VP Sbjct: 178 ELAIQGKIDKLIDRKKEIERTIEILLRRTKNNPIYVGEPGVGKTAIVEGLVHAIVSGNVP 237 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + + + +Y+L IGSLLAGT+YRGDFE+R + ++ ++ N+ILFIDEIHTI+GAG+ S Sbjct: 238 QKLKNTRVYALKIGSLLAGTRYRGDFEERIRTVMNEISSSKNTILFIDEIHTIVGAGSTS 297 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DA NL+KP L+ G +R IG+TTY+E+S FEKD AL RRFQ+I+I EPSI +T+ I Sbjct: 298 NGSIDAGNLLKPFLTKGPLRCIGATTYREYSTHFEKDAALDRRFQRIEIEEPSISDTLNI 357 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR---LMPV 414 I+G K YE H V YT ++ V LA +YI +R PDKAID++D+ GA Sbjct: 358 IDGTKSYYEDFHRVHYTKASLNEIVNLAHRYIPNRSFPDKAIDLMDDLGASYNAELFDVK 417 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 +R + +++ + +A+ IP ++ + + L +L LK +F QD IE + ++ Sbjct: 418 KRRDRKIDIKYVRETLAKRFNIPVAQLNYTVEEILTSLERNLKTAIFDQDNVIEQVVYSL 477 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 534 + GL E KP+ S+LF G TGVGKTE+ Q++K L ++ +R DMSEYME H VSRLI Sbjct: 478 RPGLLGLKGE-KPLASYLFGGSTGVGKTELAKQIAKNLCMQFVRIDMSEYMEGHAVSRLI 536 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG D+G + + + K +++L DEIEKAH D NILLQ++D G +TD+ G+K+ Sbjct: 537 GAPPGYVGHDKGSFIAEILFKQGSSLILFDEIEKAHADFQNILLQILDYGCITDSTGKKS 596 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 F+N ++V TTN G E S+G T + F E +RLD I F+ L Sbjct: 597 RFKNCIMVCTTNVGSTFIENNSLGFTQDGKKTGKEAQFASFFNKELLDRLDLAIVFNTLD 656 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + + ++++K E++ L+++G+ L ++ E L + + AR + R I++++ + Sbjct: 657 KNSVEKIINKSATEIRALLEERGIKLSLTDEVVKSLVARHSSGKISARTIERTIRNDIMQ 716 Query: 715 PLANELLFGSLVD 727 +++ +L + Sbjct: 717 AVSDRMLRSKTSE 729 >UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAZ3_9FIRM Length = 765 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 282/753 (37%), Positives = 433/753 (57%), Gaps = 27/753 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN-PSAREALEACSVDLVALRQELEA 60 ++ L A A + E HLLLA+L +A + L ++ +R++L Sbjct: 15 FSRPAARLLQQAVQLAGDLGCEQADTSHLLLAMLQQQGAAAQFLTRKNITEPEVRRQLAQ 74 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 L D +R + A+ Q++ + ++L A+ + A Sbjct: 75 QRSGPAQRLDRQSMAPD------LRRTMDYALIGAQNAHVSRAEPEHLLCAMLEDDGCAA 128 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 LL + +S + V + Q P S G + + +L + A Sbjct: 129 GLLLAEMGLSLTEAVRECRQLS-----GQFVLPAQPRVSASIPRGSRASDKYCRDLTRRA 183 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 G +DP+ RE EL+R +++LCRR+KN+P L+GE GVGKTA+AEGLA RI G VP + Sbjct: 184 AEGELDPVFCREAELDRMVEILCRRQKNDPCLIGEPGVGKTALAEGLALRIAAGQVPRAL 243 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + +LD+ SL+AGTKYRGDFE+R K LL++L +D +ILFIDE HTI+GAGAA G Sbjct: 244 QGRRLLALDMASLVAGTKYRGDFEERLKNLLEELVRDGTAILFIDEFHTIVGAGAAEGA- 302 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DAA+++KP+L+ G++++IG+TT QEF +KD AL RRF ++ + EP+ + V+I+NG Sbjct: 303 IDAASILKPVLARGELQLIGATTNQEFRTHIQKDAALERRFGRVQVEEPTPAQAVEILNG 362 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR--K 418 L P+YE +H+VR + ++AAVEL+V+Y+ R LPDKAID++DEA A AR++ ++ + Sbjct: 363 LAPRYERYHNVRLPPQTLQAAVELSVRYLPGRCLPDKAIDLVDEACAAARILAEKEQRTQ 422 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 + DI VVA + +P + V + +R+ L L RL + GQ +A+ A+ AI+ +R Sbjct: 423 PVLTPEDIARVVAAASGVPAQRVGEQERERLDKLESRLNAEIVGQQRAVAAVAGAIRRSR 482 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS---KALGIELLRFDMSEYMERHTVSRLIG 535 GLG +P+G+ LF GPTGVGKT + L+ LL+FDMSEY E+HT +RL+G Sbjct: 483 TGLGEPGRPIGAMLFLGPTGVGKTALARALAVSWFGSEKALLKFDMSEYQEQHTAARLLG 542 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGY+G D+GG LT+AV + P++V+L DEIEKAHPD+ NILLQ++++G LTD GRKAD Sbjct: 543 APPGYLGHDEGGQLTEAVRRRPYSVVLFDEIEKAHPDIQNILLQILEDGQLTDAMGRKAD 602 Query: 596 FRNVVLVMTTNAGVR--ETERKSIGL------IHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 FRN ++++T+N G R + +G + + S A+EE KK F PE RLD + Sbjct: 603 FRNTIVLLTSNLGARFLAGQNAPLGFAAGAEAVFEKQSAQAVEEAKKWFRPELLGRLDEV 662 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 I F L+ + + + +K + +L+ + + G L + + A GAR + R Sbjct: 663 IVFRPLAEENLCAIAEKMLCQLEQRAARSGYRLRHTPQVGAA-LAARAQSAYGARELRRQ 721 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 + +++ LAN + G+ G T + + Sbjct: 722 VDRAVEQALANRIAAGTACVGQHWTADCAADGS 754 >UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=5 Tax=Lactococcus lactis RepID=Q030Z1_LACLS Length = 816 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 272/807 (33%), Positives = 444/807 (55%), Gaps = 76/807 (9%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELEA 60 L+ A A ++++ + HLL A+ S A L +VD L +LE Sbjct: 9 TPTLDRIFEKAAEDAHQYQYGTIESAHLLAAMATTSGSIAYSILAGMNVDSSDLLIDLED 68 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + + + V+ A F + V ++L A+ ++ Sbjct: 69 LSSHVKVKR------SELRFSPRAEEVVTVASFLAVHNNAEAVGTEHLLYALLQVEDGFG 122 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSS-----DPGSQPNSEEQAGGEERMENFTTN 175 LL+ +++ + + I T P + +++ +++ Sbjct: 123 IQLLKLQKINIVSLRKEIEKRTGLKVPENKKAVTPMSKRKMAKGVAENSSTPTLDSVSSD 182 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L + AR G +DP+IGRE E++R I +L RR KNNP+LVGE GVGK+AI EGLA RIV G Sbjct: 183 LTEAARSGKLDPMIGREAEVDRLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVNGQ 242 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VP + + I +L++ +++AGTK+RG+FE R A+++++ D + I+FIDE+HTIIGAG Sbjct: 243 VPIGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVSADPDVIIFIDELHTIIGAGG 302 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 DAAN++KP L+ G +++G+TTY E+ EKD AL RR +I++ EPS +E + Sbjct: 303 GMDSVNDAANILKPALARGDFQMVGATTYHEYQKYIEKDEALERRLARINVDEPSPDEAI 362 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 I+ GL+ K+E +H V++T +A+++AV L+V+Y+ R LPDKAID++DEA A ++ + Sbjct: 363 AILQGLREKFEDYHQVKFTDQAIKSAVTLSVRYMTSRKLPDKAIDLLDEAAAAVKISVKN 422 Query: 416 KR----------------------------------------------------KKTVNV 423 + ++ V Sbjct: 423 QETKRLELEKDLVKAQEELAEAVIKLDVKASRIKEKAVEKISDKIYKFSIKEEKRQEVTD 482 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 + +V + + +P +++S+ D L NL L V GQ++AI A++ AI+ AR+G+ Sbjct: 483 QAVIAVASTLTGVPITQMTKSESDRLINLEKELHKRVVGQEEAISAVSRAIRRARSGVAD 542 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGY 540 +P+GSF+F GPTGVGKTE+ L+ ++ ++R DMSE+ME+H+ SRLIGAPPGY Sbjct: 543 SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEKHSTSRLIGAPPGY 602 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+D+GG LT+ V P++V+LLDE+EKAHPDVFNI+LQ++D+G +TD GRK DFRN + Sbjct: 603 VGYDEGGQLTERVRNKPYSVVLLDEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRNTI 662 Query: 601 LVMTTNAGVRET-ERKSIGLIHQDNSTD-------AMEEIKKIFTPEFRNRLDNIIWFDH 652 ++MT+N G + K++G ++ + D +EE+K+ + PEF NR+D I F Sbjct: 663 IIMTSNLGATALRDDKTVGFGAKNITADYSAMQSRILEELKRHYRPEFLNRIDENIVFHS 722 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 L + I Q+V L +L ++ + ++++ A +AE G+D GARP+ + +Q + Sbjct: 723 LESQEIEQIVKIMSKSLIKRLAEQDIHVKLTPSAIKLIAEVGFDPEYGARPLRKALQKEV 782 Query: 713 KKPLANELLFGSLVDGGQVTVALDKEK 739 + L+ +LL G + G +++ +K Sbjct: 783 EDLLSEQLLSGEIKAGNHISIGASNKK 809 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 19/219 (8%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 + E + +A A + E + EHLL ALL + + L+ +++V+LR+E+E Sbjct: 82 FSPRAEEVVTVASFLAVHNNAEAVGTEHLLYALLQVEDGFGIQLLKLQKINIVSLRKEIE 141 Query: 60 AFIEQTTP-----VLPAS-----EEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTG---- 105 P V P S + + T + V +S + + G Sbjct: 142 KRTGLKVPENKKAVTPMSKRKMAKGVAENSSTPTLDSVSSDLTEAARSGKLDPMIGREAE 201 Query: 106 ANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHG--TRKDEPTQSSDPGSQPNSEEQA 163 + L+ I S + L+ + V + ++ ++ + + N Sbjct: 202 VDRLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVNGQVPIGLMNSRIMALNMATVV 261 Query: 164 GGEERMENFTTNLNQLARVGGIDP-LIGREKELERAIQV 201 G + F L + DP +I EL I Sbjct: 262 AGTKFRGEFEDRLTAIVEEVSADPDVIIFIDELHTIIGA 300 >UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic n=62 Tax=cellular organisms RepID=CLPAA_SOLLC Length = 926 Score = 687 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 280/819 (34%), Positives = 438/819 (53%), Gaps = 90/819 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++ + +A AR H F+ E +LL L+ + A + L++ ++L R E+E Sbjct: 97 FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVE 156 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + + + T +RVL+ ++ + G N + ++L+ + E E Sbjct: 157 KIIGRGSGFI-----AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 211 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L ++ + + S G+ +E + TNL +L Sbjct: 212 AARVLENLGADPTNIRTQVIRMVGE----SSEAVGASVGGGTSGLKMPTLEEYGTNLTKL 267 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP++GR+ ++ER Q+L RR KNNP L+GE GVGKTAIAEGLA RI GDVPE Sbjct: 268 AEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPET 327 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + +LD+G L+AGTKYRG+FE+R K L+++++Q ILFIDE+HT+IGAGAA G Sbjct: 328 IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA 387 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIE------- 352 +DAAN++KP L+ G+++ IG+TT E+ EKD AL RRFQ + + EPS++ Sbjct: 388 -IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILK 446 Query: 353 ----------------ETVQIINGLKPKY---------------EAHHDVRYTAKAVRAA 381 E ++ L +Y EA VR + Sbjct: 447 GLRERYEIHHKLHYTDEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 506 Query: 382 VELAVK-----------------YINDRHLPDKAIDVIDEAGA---------RARLMPVS 415 K + L D+ +D+ + A +A Sbjct: 507 ARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALIDKNKEKSKAESEAGD 566 Query: 416 KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIK 475 V ADI+ +V+ IP + VS + D L + + L V GQD+A++A++ AI+ Sbjct: 567 AAGPIVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISRAIR 626 Query: 476 MARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSR 532 AR GL + ++P+ SF+F+GPTGVGK+E+ L+ ++R DMSE+MERHTVS+ Sbjct: 627 RARVGLKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVSK 686 Query: 533 LIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGR 592 LIG+PPGYVG+ +GG LT+AV + P+ V+L DEIEKAHPDVFN++LQ++++G LTD+ GR Sbjct: 687 LIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 746 Query: 593 KADFRNVVLVMTTNAGVRETER--KSIGLIHQDNSTD---------AMEEIKKIFTPEFR 641 DF+N +L+MT+N G E+ + IG + D EE+K+ F PEF Sbjct: 747 TVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFL 806 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 NRL +I F L+ + ++ D + E+ V+L K + L+V++ R+ + ++GY+ + GA Sbjct: 807 NRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGA 866 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 RP+ R I L+ +A ++L G + +G V V +D + N Sbjct: 867 RPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGN 905 >UniRef50_D1PH53 ATP-dependent Clp protease, ATP-binding subunit ClpA n=1 Tax=Prevotella copri DSM 18205 RepID=D1PH53_9BACT Length = 761 Score = 685 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 313/758 (41%), Positives = 471/758 (62%), Gaps = 17/758 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 L + + + ++ A +AR HEF+ EH+LLALL + +AL+ VD + ++L + Sbjct: 6 LTRYMSVLMDDAMKQARFFDHEFVMPEHMLLALLRQYAFCQALQEEGVDSFKMHEDLVGW 65 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + + V + +P+ F+ + A ++ R V + + A+F Q S+AA Sbjct: 66 LAKQERVPETIKYL--PEPSSLFKTMFGTACALAAAADRQLVNVPHFVQAMFGLQNSEAA 123 Query: 122 YLLRKHEVSRL-----DVVNFISHGTRKDEPT-------QSSDPGSQPNSEEQAGGEERM 169 +LL K+ R V ++ G E D ++ + +E+ G + + Sbjct: 124 FLLCKNVGDRQGEFLASVDSYYPIGEDTGEAGMGMGADFDDDDYANEYDDDEEEGRRQVV 183 Query: 170 ENFTTNLNQLARV-GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +++ + ++ +PLIGRE+EL+R IQVLCR KNNPL +GE+GVGKTA+ GLA Sbjct: 184 QDWHQLVTCISDKVEEHNPLIGREQELDRTIQVLCRAEKNNPLHIGEAGVGKTALVYGLA 243 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 I + VPE + IY +D+G +LAG +YRGDFEKR K +++ ++ N+I++IDEIH Sbjct: 244 KLINENQVPERLKGARIYGMDMGQMLAGAQYRGDFEKRIKMVMEGAVKEGNTIIYIDEIH 303 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 +IGAG S G DA+N++K L +G IR IGSTTY+E++ + + + RRFQ+IDI E Sbjct: 304 NMIGAGRGSDGGPDASNMLKQYLEAGDIRFIGSTTYEEYNRYMAQSKGIVRRFQQIDIKE 363 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 P+ EE ++I+ GL+ KY H+V Y A+ AV + KYI++R LPDKAID++DEAGA Sbjct: 364 PTEEEAIKILEGLQYKYNKFHNVTYRKDALEYAVRASAKYISNRCLPDKAIDLMDEAGAY 423 Query: 409 ARLMPV-SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 + PV S+++ V + I+ ++ ++ +I ++ + D L L R+ ++GQDKA+ Sbjct: 424 LEVHPVESRQRSYVTKSIIQQILIKVCKIDAAAMKDENNDALATLRQRILDKIYGQDKAV 483 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMER 527 + + EA+ MA+AGL + KP+ S LF GPTGVGKTEV QL+K LGIEL+RFDMSEY E+ Sbjct: 484 DKVVEAVMMAKAGLTDDDKPLASLLFVGPTGVGKTEVARQLAKELGIELVRFDMSEYTEK 543 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 HTV++LIG+P GYVG++ GGLLTDA+ K P+ VLLLDEIEKAH D++NILLQVMD LT Sbjct: 544 HTVAKLIGSPAGYVGYEDGGLLTDAIRKTPNCVLLLDEIEKAHSDIYNILLQVMDYARLT 603 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-EEIKKIFTPEFRNRLDN 646 DN G+KADFRNV+L+MT+NAG + R S+G + +AM ++KK F PEF NRL + Sbjct: 604 DNKGQKADFRNVILIMTSNAGAQYASRASVGFNGNVSRGEAMLAQVKKTFKPEFINRLSD 663 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 ++ F+ + + ++ K + +L +L KGV++ ++ AR L + G+ + GAR M R Sbjct: 664 MVVFNDMDKHMAELILAKKLRQLDAKLAAKGVTVTLTDAAREQLLKWGFTKEYGAREMDR 723 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 I + LK L LLFG L GG+ V D ++ + Y Sbjct: 724 AIGNRLKPILMKALLFGKLKKGGKAHVDFDGKELVVNY 761 >UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C6_9ACTN Length = 875 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 286/845 (33%), Positives = 449/845 (53%), Gaps = 100/845 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + L +A AR ++ EH+LLA L + + L + + + +E Sbjct: 5 FTAQTRNILLLAQEEARSVGKLYVGTEHILLAYLKDEENSVTQVLSSFDITYAQAYEIVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + + +R L +A + +T ++ +A+ + ES Sbjct: 65 SLASTGAADAASGH----VPFSALTKRALAQAFTLASAHATGLITTKDLFIAMLALPESH 120 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPN----------------SEEQA 163 A +L + VS + I +E + D S + S+ ++ Sbjct: 121 ACLVLTRIGVSFSSLSTAIDALDDSEEYSAPEDAESTQDEQDDDLTEVAYGIPSASQARS 180 Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 + ++ + NL +A+ +DP+IGR+KE+ R Q+L RR+KNNPL++G+ GVGKTA+ Sbjct: 181 KMGKLLKRYGKNLVAVAQQEKLDPVIGRDKEITRIAQILARRQKNNPLILGDPGVGKTAV 240 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILF 283 EGLA I + P +AD I++LDI S+LAG KYRG+FE R K ++ ++ + TN ILF Sbjct: 241 VEGLAQLIATHNAPVTLADKQIWTLDISSMLAGAKYRGEFEDRLKRVINEVRKATNIILF 300 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDEIHTIIGAG+A G +DAA+++KP LS +I+VIG+TT +E+ EKD AL RRFQ Sbjct: 301 IDEIHTIIGAGSAE-GSIDAASILKPPLSRSEIQVIGATTAEEYRKHIEKDPALERRFQP 359 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 +++ EP++ +T+QI+ GL +YEA H V YT A+ A L+ +YI DR LPDKAIDVID Sbjct: 360 VEVCEPTVSQTLQILKGLSARYEAFHHVHYTQNALVEATRLSHRYIQDRFLPDKAIDVID 419 Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNL---GDRLKMLV 460 EAGAR ++ + + V + + +A++ E+ ++ + + ++ L+ + Sbjct: 420 EAGARKSVVKRHEPHEIVT---MRTALAKLKEKKERLLAHENYEDAASVRDDEKSLEQKI 476 Query: 461 F-------------GQDKAIEALTEAI--------------------------------- 474 Q+ + + I Sbjct: 477 VHAVKDWEKSRASEQQNVDVNDIARVISDISGVPVTSLTEKESEKLLRCEQELHKRLIGQ 536 Query: 475 -----------KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFD 520 + +R+ L +P GSF+F GP+GVGKTE+ L++ L L+ FD Sbjct: 537 KEAVAKVAHAIRRSRSPLKDPARPGGSFIFLGPSGVGKTELAKSLAEFLFGTQEALISFD 596 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MSE+ME+H VS+L+GAPPGYVG+DQGG LT AV + P++V+L DEIEKAHPDVFNILLQ+ Sbjct: 597 MSEFMEKHEVSKLVGAPPGYVGYDQGGELTKAVRRRPYSVVLFDEIEKAHPDVFNILLQI 656 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRET---------ERKSIGLIHQDNSTDAMEE 631 ++ G LTD GR DF N V++MT+N G RE + GL +++ + E Sbjct: 657 LEEGRLTDGQGRVVDFSNTVIIMTSNIGAREIAHTSPMGFSSQGDDGLSYKEIKSRVKSE 716 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLA 691 +K+ F PEF NR+D I+ F LS + + ++V+ + +L +L Q+ + L +S A + +A Sbjct: 717 LKRSFRPEFLNRVDEIVVFTTLSKEELRKIVELMVSQLAYRLAQEHIMLTLSDAACDLIA 776 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 +KG D GARP+ R +Q ++ LA +LL G + V +D +++EL + + A Sbjct: 777 QKGTDPIYGARPLRRTLQRLVEDRLAEDLLEHKWSAGDE--VYVDAQEHELVFKKREADL 834 Query: 752 HKAEA 756 K +A Sbjct: 835 QKLQA 839 >UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWX3_9BACL Length = 824 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 291/824 (35%), Positives = 452/824 (54%), Gaps = 80/824 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 N+ + L A A + + + EHLLLA+LS N + + L V R+ + Sbjct: 5 FNETALMVLTTAKEEANDFGVKAVGTEHLLLAMLSMQNTISCKVLNRHGVYYDDFRKSVV 64 Query: 60 AFIEQTTPVLPASEEERD-TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 F E T R ++ + + + VT ++L+++ E+ Sbjct: 65 DFYEAELEGTDFYRNVLMKIDYTNGAVRTIENSQRYADDTSSFVVTSEHLLLSLLEEETG 124 Query: 119 QAAYLLR-KHEVSRLDVVNFISHGTRKDEPTQSSDP---GSQPNSEEQAGGEERMENFTT 174 A LL K ++ +V+ + +K+ S SE + + + + Sbjct: 125 TAVRLLTDKLGINVDALVDELFDLVKKNHALVSKLYEGFKKITESENSSSKTKTLNSLAK 184 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +L + A +DP++ R+KE+ R I++L RR KNNP+L+GE GVGKTAI EGLA RIV Sbjct: 185 DLTRDAFNNKLDPVLARDKEITRMIEILNRRTKNNPVLIGEPGVGKTAIVEGLAERIVSQ 244 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 +VP + + LD+G+LLAGTKYRG+FE+R K ++ ++E + ILFIDEIHTIIGAG Sbjct: 245 NVPSNLLGKRVMVLDMGTLLAGTKYRGEFEERLKNIIAEIEDAGDIILFIDEIHTIIGAG 304 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 + G DA+N++KP LS G I+ IG+TT +E+ FEKD AL RRFQ I + EPS E++ Sbjct: 305 GSE-GSADASNILKPALSRGLIQCIGATTTEEYRKYFEKDAALERRFQPIKVEEPSTEDS 363 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA----- 409 ++I+ GL+ KYE HHDV +A+ +AV+L+ YI DR LPDKAID+IDEA ++ Sbjct: 364 IKILEGLRHKYEEHHDVEILDEAICSAVKLSTTYITDRCLPDKAIDLIDEACSKVKLRYY 423 Query: 410 -------------------RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQS------ 444 + V ++ + + V I++I E +S Sbjct: 424 KSPDKLKEYEDELTRLNKEKDRAVINQEFEIAAKKRDEVNKVISKIEEFKISWQDSLSKD 483 Query: 445 ---------------------------DRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 + + L L + L V GQD+A+ +L +A++ A Sbjct: 484 KIKITSEHIAEVLAAWTGVPVTKLTESESERLLKLEEILHKRVIGQDEAVVSLAKAVRRA 543 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLI 534 R+G ++P+GSF+F GPTGVGKTE+ LS+AL ++R DMSEYME H++SRL+ Sbjct: 544 RSGFKAPNRPIGSFIFLGPTGVGKTELAKSLSEALFSSEDNMIRIDMSEYMEPHSISRLV 603 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++ G L++ V + P++V+L DEIEKAHP +FNILLQV+D+G LTD +GR Sbjct: 604 GAPPGYVGYEEVGQLSEQVRQKPYSVVLFDEIEKAHPSIFNILLQVLDDGRLTDASGRVI 663 Query: 595 DFRNVVLVMTTNAGVRET-ERKSIGLIHQDNSTD--------AMEEIKKIFTPEFRNRLD 645 DF+N +++MT+N GV E ++K +G D+ + ME +KK + PEF NR+D Sbjct: 664 DFKNTIIIMTSNVGVSELNDQKFVGFGGSDSIKNDYKNVQNTMMEALKKQYRPEFLNRID 723 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 +II F L + + ++ + I L +L+ + ++++++++A + E G + GARP+ Sbjct: 724 DIIVFKTLEKEELEKISELLIDGLSKRLEDRNITIKLTKKAMAKIVEDGSIKEYGARPLK 783 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 R IQ N++ L+ ELL + G T+ +D +K+ Sbjct: 784 RSIQKNIEDLLSEELLQNPELTG---TINIDYKKDSFVVKKTKR 824 >UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Treponema RepID=B2S3E1_TREPS Length = 814 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 286/810 (35%), Positives = 432/810 (53%), Gaps = 81/810 (10%) Query: 2 LNQELELSL-NMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQEL 58 L+ L + ARE R + EH+LLAL+ + R + +E D+ +R L Sbjct: 5 LSANARKVLLELGQTVAREARASLLQPEHILLALIQHKVGRGYKLIEKLIEDVATVRLIL 64 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E + + + + D + + +L A +S + ++++A E+++ Sbjct: 65 EQHVLTNEGDVASPQ---DLPVSGRVKHLLDIAAMEARSLRCAYIGTEHLVIAFAREEQN 121 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 L + +S D+ N SS + + ++ + T+L + Sbjct: 122 PLFQSLIREGLSLDDLRNA---------SIISSPHSDTTRTRLERKVASVLDEYGTDLTE 172 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR G ++P+IGR KE+ R IQ+LCRR KNNP+L+GE GVGKT+I EGLA+ IV+ +VP Sbjct: 173 RARAGALNPVIGRNKEITRVIQILCRRGKNNPVLIGEPGVGKTSIVEGLAYAIVREEVPH 232 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 ++ + SLD+ +++AGTKYRG FE+R K ++K++E+ ILFIDE+HT+IGAG Sbjct: 233 ILLHTRVVSLDLAAVIAGTKYRGQFEERLKRIIKEVEETEKVILFIDELHTLIGAGGTQ- 291 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DAAN++KP L+ G+I+ IG+TT E+ FEKD AL RRF+ + + EPS EET I+ Sbjct: 292 GSLDAANMLKPALARGQIQCIGATTLAEYRRYFEKDAALTRRFRSVLVREPSFEETCTIL 351 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP----- 413 +K YE HH V Y + A+ VEL+ +YI +R PDKAID++DE GA R+ Sbjct: 352 RKIKSHYERHHQVIYQSDALEKIVELSRRYIPERFFPDKAIDLMDEVGAMKRVQQRADTQ 411 Query: 414 ------------VSKRKKTVNVADIESVVARIAR-------------------------- 435 ++ ++ + + D + Sbjct: 412 VLRSFSIKVANLTTETERAIALEDWARARSLHTDVVQLRRRLHALKVEWSAREALSIFAE 471 Query: 436 -----------IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 IP S+ + N+ L V GQ +AI L AI AR G+ + Sbjct: 472 DVAQAVSLMTDIPVHSLEGDELCRFTNIERDLCATVRGQREAIATLARAIVRARVGISSD 531 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYV 541 +P+GSFLF GPTGVGKT + L++ L L+R DMS+YMER+ SRL+GAPPGYV Sbjct: 532 TRPIGSFLFLGPTGVGKTLLAKTLAEFLFGSADALIRIDMSDYMERYNTSRLMGAPPGYV 591 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 GF+ GGLLT+ V P +V+LLDEIEKAHPDVFN+LLQV++ G L DN G +FRN ++ Sbjct: 592 GFENGGLLTERVRHRPFSVILLDEIEKAHPDVFNVLLQVLEEGELQDNLGHTVNFRNTII 651 Query: 602 VMTTNAGVRETERKSIGLIHQDNST--------DAMEEIKKIFTPEFRNRLDNIIWFDHL 653 +MT+NAG R G A+ EIK+IF+PEF NR+D + F L Sbjct: 652 IMTSNAGTRGLGENVPGFQTARARNIEYRQLRVQALREIKRIFSPEFLNRVDECVVFAPL 711 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + ++++ + +L +L K + L S A+ + E G+D +GARP+ RV+Q ++ Sbjct: 712 ERETLQEILECELKKLAERLRGKDIVLRYSAAAKAYCLEHGFDPFLGARPLRRVLQQEIE 771 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNELT 743 LA ++ G+L G V + D + L+ Sbjct: 772 NELALRMIHGTLRAGSCVHIDSDGARLHLS 801 >UniRef50_A4W448 ATPases with chaperone activity, ATP-binding subunit n=73 Tax=Streptococcus RepID=A4W448_STRS2 Length = 817 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 286/814 (35%), Positives = 442/814 (54%), Gaps = 78/814 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 +++ L+ A A+ + +++ HLLLA + NP A L D++ + + Sbjct: 3 ISRGLQGVYEDAQLIAQRYSSDYLETWHLLLAFVINPDTVAGAILAEYPADVLDYERAV- 61 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ E + + + A + + ++ + + ++ S Sbjct: 62 -YMVMGRRYHEELESFFFLPSSKRVKELQVFAEKIAEIVKSKGLGTEHIFMGMLLDKRST 120 Query: 120 AAYLLRKHEVSRLDV-----------------------VNFISHGTRKDEPTQSSDPGSQ 156 A+ +L + D + I T+ +P Q++ Sbjct: 121 ASQILDQVGFHFEDSDDKVRFLDLRKNLEAKAGFTKEHLKAIRTMTKGGKPKQATVGNMM 180 Query: 157 PNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGES 216 ++ Q+GG +E++T +L LAR G ++P+IGR++E+ R +Q+L R+ KNNP+LVG++ Sbjct: 181 GMTQSQSGG---LEDYTRDLTALARSGQLEPVIGRDEEISRMLQILSRKTKNNPVLVGDA 237 Query: 217 GVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ 276 GVGKTA+A GLA RI G+VP + + I LD+ +++AGT++RGDFE+R ++ +E+ Sbjct: 238 GVGKTALALGLAQRIANGEVPASLVNMRILELDLMNVIAGTRFRGDFEERMNNIINDIEE 297 Query: 277 DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 D ILFIDE+HTI+G+G+ +DAAN++KP LS G +R +G+TT E+ EKD A Sbjct: 298 DGRVILFIDELHTIMGSGSGIDSILDAANILKPALSRGTLRTVGATTQDEYQKHIEKDAA 357 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L RRF K+ I EPS+ ++V I+ GLKP YEAHH V + +AV AV A +Y+ ++LPD Sbjct: 358 LVRRFAKVTIEEPSVADSVAILQGLKPAYEAHHKVTISDQAVVTAVAYAKRYLTSKNLPD 417 Query: 397 KAIDVIDEAGARAR-------------------------------------LMPVSKRKK 419 AID++DEA A + + Sbjct: 418 SAIDLLDEASATVQNRAKGQVEEGGLTALDQALMAGKYKTVTQLLLKAQEAENQATSYSL 477 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 V DI + ++R++ IP +SQ+D NL L V GQ++AI A++ AI+ ++ Sbjct: 478 EVTEEDILATLSRLSGIPVTKLSQTDAKKYLNLEQELHKRVIGQEEAISAVSRAIRRNQS 537 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGA 536 G+ H+P GSF+F GPTGVGKTE+ L++ L + L+RFDMSEYME+ SRL GA Sbjct: 538 GIRTGHRPSGSFMFLGPTGVGKTELAKALAEILFDDESALIRFDMSEYMEKFAASRLNGA 597 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG+++GG LT+ V P++VLL DE+EKAHPD+FN+LLQV+D+G LTD GRK DF Sbjct: 598 PPGYVGYEEGGELTEKVRNKPYSVLLFDELEKAHPDIFNVLLQVLDDGVLTDRKGRKVDF 657 Query: 597 RNVVLVMTTNAGVRET-ERKSIGLIHQD-------NSTDAMEEIKKIFTPEFRNRLDNII 648 N V++MT+N G + K++G D E +KK + PEF NR+D + Sbjct: 658 SNTVIIMTSNLGATALRDDKTVGFGALDLSKSQEHVEKRIFEALKKAYRPEFINRIDEKV 717 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F L+ + VV + L KG++L++ A LA++GYD MGARP+ R++ Sbjct: 718 VFHSLTEADMQDVVKVMVKPLIAVAASKGITLKLQASALKLLAKEGYDPEMGARPLRRLL 777 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 Q L+ PLA LL G L G + V + E+ + Sbjct: 778 QTKLEDPLAEMLLRGELPAGVTLKVGVKAEQLKF 811 >UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit ClpC n=34 Tax=Bacteroidetes RepID=B2RGN2_PORG3 Length = 859 Score = 677 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 296/847 (34%), Positives = 455/847 (53%), Gaps = 118/847 (13%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 Q SL ++ A +T + L+L ++ + A + + ++L L++ +E Sbjct: 5 FTQTFRNSLEYSYQEATRLGVVAVTQDMLVLGIIRDGDNGAIDIMRHYGINLYELKRLIE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE-QES 118 +E LPAS E T S + + A V+ ++L++I + QES Sbjct: 65 --LEAIAESLPASPEGLPI-FTPSAREAIDDATDICADMEDEAVSPVHLLLSILNSTQES 121 Query: 119 QAAYLLRKHEVSRLDVVN-----------------------------------------F 137 + K + +++ Sbjct: 122 LVQKIFMKQGIKYDTILSDYFGQRNPSEGKSPSEMEILDGYQDNDFDDEEDESSPPSGNS 181 Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 + G D P Q++ G + G ++ F T++ +A G +DP++GRE+E+ER Sbjct: 182 GTGGGSGDAPEQNTGGGDTTTTTRSGGDTPALDTFGTDITAMAAAGKLDPVVGREQEIER 241 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 IQ+L RR+KNNP+L+GE GVGK+AI EGLA RIV V ++ D I SLD+ ++AGT Sbjct: 242 VIQILSRRKKNNPVLIGEPGVGKSAIVEGLAERIVNRKVSRILFDKRIISLDLAQMVAGT 301 Query: 258 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 KYRG FE+R KA+L +L+++ ILFIDEIHTI+GAG+A+ G +D AN++KP L+ G+++ Sbjct: 302 KYRGQFEERLKAVLDELKKNPQIILFIDEIHTIVGAGSAA-GSMDTANMLKPALARGQVQ 360 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 IG+TT E+ EKD AL RRFQK+ I + EET+ I+ +K KYE +H VRYT +A Sbjct: 361 CIGATTLDEYRKNIEKDGALERRFQKVPIAPSTAEETLTILQNIKEKYEDYHGVRYTDEA 420 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV----------------------- 414 ++AAVEL +Y++DR PDKAID +DEAGA + V Sbjct: 421 IKAAVELTDRYVSDRFFPDKAIDAMDEAGASVHITNVVAPKEIEILEAELASVRENKLSA 480 Query: 415 -----------SKRKKTVNVADIESVVARI-----------------------ARIPEKS 440 + ++ I + +P + Sbjct: 481 VKAQNYELAASFRDQERRTQQQIAEEKKKWEEQMSKHRETVDENVVAHVVALMTGVPAER 540 Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 +S + + L+ + D LK V GQD AIE + AI+ R GL +E KP+GSFLF GPTGVG Sbjct: 541 LSTGEGERLRTMADDLKTKVVGQDTAIEKMVRAIQRNRLGLRNEKKPIGSFLFLGPTGVG 600 Query: 501 KTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 KT + +L++ L + ++R DMSEYME+ +VSRL+GAPPGYVG+++GG LT+ V + P Sbjct: 601 KTYLAKKLAEYLFEDENAMIRVDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTERVRRKP 660 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI 617 ++V+LLDEIEKAH DVFN+LLQVMD G LTD+ GR+ +F+N V+++T+N G R+ + Sbjct: 661 YSVVLLDEIEKAHADVFNLLLQVMDEGQLTDSLGRRVNFKNTVIIITSNVGTRQLKDFGQ 720 Query: 618 GLIHQDNSTD----------AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 G+ + + + + K F+PEF NRLD+II FD L I ++VD + Sbjct: 721 GIGFRSEKDEEANKEHSRSVIQKALNKTFSPEFLNRLDDIILFDQLGKTEIRRMVDIELK 780 Query: 668 ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVD 727 + ++ + G L ++ EA++ +A KGYD GARP+ R +Q+ ++ L + +L G + Sbjct: 781 AVLARIHRAGYDLVLTDEAKDVIATKGYDLQYGARPLKRTLQNEVEDRLTDLILSGQIEK 840 Query: 728 GGQVTVA 734 G +T++ Sbjct: 841 GQTLTLS 847 >UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HLYB_TREHY Length = 828 Score = 676 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 295/823 (35%), Positives = 466/823 (56%), Gaps = 76/823 (9%) Query: 2 LNQELELSLNM-AFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQEL 58 L + + + + A A+ H+ +T EH+LL LL S A L +DL L+ EL Sbjct: 6 LTSKAKKVIELYAQEEAKRLNHDMVTPEHILLGLLYESEALATRVLMRLKIDLDRLKLEL 65 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E+ + +++ Q+++ R+ ++ N + ++L+ + E+ Sbjct: 66 ESAMVKSSTTKVFGTLPT----APRVQKLISRSAEEARALSHNYIGTEHLLLGLLREESG 121 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 A +L + + I SS + + ++ F +L + Sbjct: 122 TAYNVLTSMGLELTILRQEILKMLGVAGSNISSMEQTSQEDNVKKVKTPTLDQFARDLTK 181 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 +AR +D +IGRE E+ R +Q+L RR+KNNP+L+GE GVGKTAI EGLA +IV DVP+ Sbjct: 182 MARDKALDRVIGRENEVMRVVQILSRRKKNNPILLGEPGVGKTAIVEGLAEKIVAADVPD 241 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 ++ + +LD+ S++AGTKYRG+FE+R K ++ ++++ +N I+FIDE+HT+IGAG A G Sbjct: 242 ILLKKRVLTLDLSSVVAGTKYRGEFEERIKNIVLEIKKASNIIIFIDELHTLIGAGGAEG 301 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DAAN++KP LS G+I+ IG+TT E+ EKD AL RRFQ I++ EPSIE+T++I+ Sbjct: 302 A-LDAANMLKPALSRGEIQCIGATTINEYKKYIEKDGALVRRFQPINVEEPSIEDTIEIL 360 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR----LMPV 414 NG+K KYE HH V+YT +A+ AA L+ +YI +RHLPDKAID+IDEAG+RAR P Sbjct: 361 NGIKGKYEEHHKVKYTDEAINAAAVLSKRYIFERHLPDKAIDLIDEAGSRARLLNMTRPQ 420 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL------------------ 456 + + ++ R+ + RD + +L + L Sbjct: 421 EFKDLEKKIEELNQQKKRVVESQNFEDAAKIRDEITSLQEELSKKEEKCREEREKIETFI 480 Query: 457 ------------------------KMLVFG-----------QDKAIEALTEAIKMARAGL 481 + G Q +AI ++++AI+ +RAGL Sbjct: 481 EEDDIRHVISEITNIPIKRLLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRRSRAGL 540 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPP 538 +P+GSF+F GPTGVGKT + LS+ + L+R DMSE+ME+ VSRLIGAPP Sbjct: 541 KTSKRPLGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGAPP 600 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+++GG LT+ V + P++++L DEIEKAHPDV NILLQV++ G LTDN GRK DF N Sbjct: 601 GYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNFGRKVDFSN 660 Query: 599 VVLVMTTNAGVRETER-KSIGLIHQDNSTD-------AMEEIKKIFTPEFRNRLDNIIWF 650 ++++T+N G R+ + S+G + D A+EE+K+ F PEF NR+D+II F Sbjct: 661 TIIIITSNLGARDIVKGSSLGFNAVGSEKDANDIKNFALEELKQNFNPEFLNRIDDIIVF 720 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 LS + + +++ + EL + ++ + + +S+EA+N++ +KG+D+ GAR + R IQ Sbjct: 721 HTLSKEDLKDIINIMLKELNEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQK 780 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHK 753 ++ ++ E+LFG++ DG + V + +Y ++K Sbjct: 781 EIEDYVSTEILFGNIEDGDTINVDRNDGSLIFSYDKSVKTENK 823 >UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Ruminococcaceae RepID=C7H753_9FIRM Length = 777 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 282/753 (37%), Positives = 430/753 (57%), Gaps = 29/753 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++E L L+ A A HLLLA+L A L ++ A+R++L Sbjct: 24 FSREAGLLLDEAVELAGSMGCARADTGHLLLAMLQTDRGPAGRFLAGKNITEPAVRRQL- 82 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + +R + A+ Q++ + ++L A+ + + Sbjct: 83 -----AEGRTSPARQLDRKALAPDLRRAMDYALIGAQNAHLPKAEPEHLLCAMLEDTDCA 137 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A LL V + V + + + + P + + + +L + Sbjct: 138 AGVLLASMGVQLAEAVRECRQISGQFILPGTPRASAMPRGSRAS------DKYCRDLTRR 191 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP+ R+ EL+R +++LCRR+KNNP LVGE GVGKTA+AEGLA RI +VP + Sbjct: 192 AVDGELDPVFCRDAELDRMVEILCRRQKNNPCLVGEPGVGKTALAEGLAQRIASRNVPRM 251 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + +LD+ SL+AGTKYRGDFE+RFK LL++L +D ++ILF+DE HTI+GAGAA G Sbjct: 252 LQGRRLLALDMASLVAGTKYRGDFEERFKTLLEELVRDGSAILFVDEFHTIVGAGAAEGA 311 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAA+++KP+L+ G++++IG+TT QEF +KD AL RRF ++ I EP+ + I+ Sbjct: 312 -IDAASILKPVLARGELQLIGATTDQEFRTHIQKDAALERRFGRVQIEEPTPAQAAAILE 370 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG--ARARLMPVSKR 417 GL P+YE +H V + +R AVEL+V+Y+ R LPDKAID++DEA AR R K Sbjct: 371 GLAPRYERYHSVHLPPETLREAVELSVRYLPGRFLPDKAIDLVDEACAAARIRAEREGKA 430 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 T+ DI VVA+ + +P + V + +R+ L L RL + GQ KA+ A+ AI+ + Sbjct: 431 DPTLTREDIARVVAQASGVPVERVGEKERERLDKLESRLNAEIVGQQKAVAAVAGAIRRS 490 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLI 534 R GLG +P+G+ LF GPTGVGKT + L+ + LL+FDMSEY E+HT +RL+ Sbjct: 491 RTGLGEPGRPMGAMLFLGPTGVGKTALAKALAASWFGSEKALLKFDMSEYQEQHTTARLL 550 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGY+G D+GG LT+AV + P++V+L DEIEKAHPD+ NILLQ++++G LTD GRKA Sbjct: 551 GAPPGYLGHDEGGQLTEAVRRRPYSVVLFDEIEKAHPDIQNILLQILEDGQLTDAMGRKA 610 Query: 595 DFRNVVLVMTTNAGVR--ETERKSIGL------IHQDNSTDAMEEIKKIFTPEFRNRLDN 646 DFRN ++++T+N G R + +G + + S A+EE KK F PE RLD Sbjct: 611 DFRNTIVLLTSNLGARFLAGQSAPLGFAAGSEAVFEKQSAQAIEEAKKWFRPELVGRLDE 670 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 +I F L+ D + + +K + +L+ + + G L + LA + GAR + R Sbjct: 671 LIVFRPLAEDSLCAIAEKLLGQLEARAARNGYQLTHTPRVGAVLAARARSP-YGARELRR 729 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 + +++ LAN++ G+ G T + Sbjct: 730 QVDRAVEQALANQIASGTAHTGQHWTADCTVDG 762 >UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Clostridiales RepID=UPI0001973947 Length = 801 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 330/803 (41%), Positives = 475/803 (59%), Gaps = 55/803 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +++E+ + A A E E++T E LL + P REA E C D L+ +LEA+ Sbjct: 4 IDEEVARVFSGAVKEAGERGLEYVTPELFLLKIADEPMFREAFEECGGDCGELKSKLEAY 63 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 I + +PAS+ +++ P+ +L Q+ G+ + +++ A + + S A Sbjct: 64 IREQ---VPASDGKKEPVPSADLNELLFYTELTTQNCGKRSIDLNHLIAAYYHLENSFAL 120 Query: 122 YLLRKHEVSRLDVV-NFISHGTRKDEPTQSSDPGSQPNSEEQ------------------ 162 Y L + + + +++ I G + + + + ++ E+ Sbjct: 121 YYLMEQGIEKAELLLELIESGEKWEGEYEEYEVHEGGDNSEEWEEYYAREYELEKRREEL 180 Query: 163 -------------------------AGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 E+ ++ T LN + PLIGRE ELER Sbjct: 181 MRGGGKRTEGKNDDGGEEDIPFGSTEKKREKWRDYVTCLNDSLSD--VSPLIGREDELER 238 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 +Q+LCRR KNNPL +GE GVGKTAIA GLA + + VPE + IYSLD+G+++AGT Sbjct: 239 TMQILCRREKNNPLHIGEPGVGKTAIAYGLARLLEEEKVPEALKGARIYSLDLGAMIAGT 298 Query: 258 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 +YRG+FEKR K++L LE++ I+++DEIH I+GAGA G DA+NL+KP L++G+IR Sbjct: 299 QYRGEFEKRLKSVLAGLEREEKPIVYLDEIHNIVGAGAVGEGSFDASNLLKPYLAAGRIR 358 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 IG+TT++E+ FEK ++L RRFQ I+I+EP EETV+I+ GL+ YE +H V Y Sbjct: 359 FIGATTHEEYKKHFEKSKSLVRRFQNIEISEPGEEETVKILEGLRKHYEKYHGVSYKKGV 418 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 + AV ++ +YIN+R LPDKAID+IDEAGA +L P+ ++K+TV I+ ++++ RIP Sbjct: 419 MEYAVHMSARYINERFLPDKAIDLIDEAGAYRKLHPLPQKKQTVGKEVIDEILSKTCRIP 478 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 +K V + L L RL VFGQD+AI+ + AIK +RAGL KP+ SFLF GPT Sbjct: 479 KKVVESGEIKKLAGLERRLSACVFGQDEAIKEVVNAIKFSRAGLSEAGKPLASFLFVGPT 538 Query: 498 GVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 GVGKTE+ L+ LGI L+RFDMSEY E+H V++LIGAP GYVG+++GGLLT+AV K+P Sbjct: 539 GVGKTEIARSLASELGIRLIRFDMSEYEEKHAVAKLIGAPAGYVGYEEGGLLTEAVRKNP 598 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI 617 HAVLLLDEIEKAH D++NILLQVMD TLTDN GRKADFRN+VL+MT+NAG + + Sbjct: 599 HAVLLLDEIEKAHSDIYNILLQVMDYATLTDNQGRKADFRNIVLIMTSNAGASRLTKARL 658 Query: 618 GLIHQDNSTD----AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL 673 G + M+E+ ++F PEFRNRL I+ FD + ++ K + EL L Sbjct: 659 GFGDGAGADGRGSVIMDEVNRVFQPEFRNRLSRIVVFDGIDERTAREIAGKKLRELGALL 718 Query: 674 DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 ++ V +++A L +KG R GAR + RVI+ +K LA+ LLFGSL GG Sbjct: 719 SERQVEFSFTRQAEALLTKKGVSREYGARELTRVIEREIKPLLADRLLFGSLKRGGF--C 776 Query: 734 ALDKEKNELTYGFQSAQKHKAEA 756 LD + ++ K K E Sbjct: 777 RLDVKDGAFVLSDEAGAKEKREE 799 >UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD Length = 745 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 274/765 (35%), Positives = 422/765 (55%), Gaps = 45/765 (5%) Query: 7 ELSLNMAFARAREHRHEFMTVEHLLLALLSNP-SAREALEACSVDLVALRQELEAFIEQT 65 L + A H + EHLLL L+ +A L L LR+ +E I + Sbjct: 9 RLVFHYAREEGNRLGHAMVGPEHLLLGLMREGGTAATILSEFGASLDGLRRRVEEIIGRG 68 Query: 66 TPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLR 125 T +RV++ A +S G + ++L+ I E + A +L+ Sbjct: 69 EGNRLNDA----PSITPRARRVMELASAEARSLGAQVTSTEHILLGIIREGDGVAFRILQ 124 Query: 126 KHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGI 185 + +D + + +++ P + P ++ + +L + AR G + Sbjct: 125 EL-TKDVDTIRWRVLAQGDGSSGKAAKPVATP----------FLDEYGRDLTKQAREGKL 173 Query: 186 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTI 245 DP+IGR +E+ R Q+L RR KNNP+L+G+ GVGKTAI EGLA I + P + + Sbjct: 174 DPVIGRSEEIRRVTQILTRRTKNNPVLIGDPGVGKTAIVEGLALAIFEKRTPPNLHGVRL 233 Query: 246 YSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAAN 305 SLD+ ++AGTKYRG+FE+R + ++++L + + FIDE+HT++GAG A G +DAAN Sbjct: 234 VSLDLSGVVAGTKYRGEFEERLRQIIEELR-NAKVMAFIDELHTLVGAGGAE-GTLDAAN 291 Query: 306 LIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKY 365 ++KP LS G+I+VIG+TT E+ EKD AL RRFQ + + EPS ET+QI+ GL+P+Y Sbjct: 292 ILKPALSRGEIQVIGATTTGEYHRYIEKDAALERRFQPVIVLEPSPAETLQILRGLRPRY 351 Query: 366 EAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM--------PVSKR 417 E HH V+ A+ AV + + + R+ PDKAID+IDEA +R RL Sbjct: 352 EEHHGVQIPESALELAVRIGERSLPGRNFPDKAIDLIDEAASRVRLNMSVGLPVSETEDG 411 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 + V+ DIESV+ + I S L +L ++L+ V+GQ +AI+AL+ A++ A Sbjct: 412 EPMVSREDIESVINSMGGI----YSDESAGQLSDLEEQLQEQVYGQPEAIKALSSALRRA 467 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLI 534 R GLG + SFLF GP+GVGKT + L+K L L+R DMSE+ E H++S+LI Sbjct: 468 RVGLGGRTRVSASFLFVGPSGVGKTHLAKALAKTLFGSERSLIRVDMSEFQEAHSISKLI 527 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 G+PPGYVGF+QGG LT+AV + P +V+LLDEIEKAHPDV+N LQV+D+G LTD GR Sbjct: 528 GSPPGYVGFEQGGRLTEAVRRQPFSVILLDEIEKAHPDVYNTFLQVLDDGRLTDGLGRTV 587 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 DFR +++MT+N G + DN+ ++ IFTPEF +RLD++I F L Sbjct: 588 DFRRTIIIMTSNTGFNVNPTVGFSPVTPDNNA----PLRNIFTPEFLDRLDDVIRFRPLG 643 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAE--KGYDRAM---GARPMARVIQ 709 D + +V + + E++ +L + +++ WL K +R + +++ Sbjct: 644 EDELVRVAQQLLGEMREELASRELNVTFDPAIAAWLVSKLKARSPKHAVGSSRQLRTLLR 703 Query: 710 DNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKA 754 + ++ PLA EL+ G ++ V L ++ + G + + A Sbjct: 704 EEIEDPLALELIGN---AGEELRVVLGQDGIQFERGKTAPPQILA 745 Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALR 55 + + +A A AR + + EH+LL ++ L+ + D+ +R Sbjct: 79 ITPRARRVMELASAEARSLGAQVTSTEHILLGIIREGDGVAFRILQELTKDVDTIR 134 >UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0P0_9FIRM Length = 833 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 295/812 (36%), Positives = 443/812 (54%), Gaps = 76/812 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 Q ++ + A+ ++ LLL +L + +A EAL+ C VD E Sbjct: 7 FTQAAIKAVEFSQYIAQRRGKGYIGTGQLLLGILHMRDTTAAEALDKCGVDYD----SAE 62 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + E T QRV+Q A+ + R+ VT ++L+++ +E E Sbjct: 63 QVIREGDGFQDVLTPEETPYYTRRAQRVMQGAIDTARE-ERSFVTTEHILLSLLAEGEGT 121 Query: 120 AAYLLRKHEVSRLDVVNFIS-HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 A L V + N + +E + + + + G ++ + T+L Sbjct: 122 AIQTLEDLNVDIEALQNDVRAQMEDTEEAPKERSARRKTGKDSRKGLPASLKKYGTDLTA 181 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A G +DP+IGR E++R IQ+L RR KNNPLL+GE+GVGKTAIAEGLA RI G+VP Sbjct: 182 AAGGGELDPVIGRTAEIDRVIQILARRTKNNPLLLGEAGVGKTAIAEGLARRIAAGEVPF 241 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 ++ D I +L + +L+AGTKYRG+FE+R K ++ + + N ILFIDEIHT+I AG A G Sbjct: 242 LLEDKRIVTLSMTALVAGTKYRGEFEERLKNVVDDVVKAKNIILFIDEIHTLIRAGGAEG 301 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DAAN++KP L+ G++++IG+TT E+ F KD ALARRFQ + + EP + QI+ Sbjct: 302 A-LDAANILKPALARGQMQIIGATTLSEYKKYFAKDGALARRFQTVTVDEPGEADAEQIL 360 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GL+ +YE H R AV AAV L+ +Y+ DR LPDKAID++DEA +R R+ V Sbjct: 361 LGLRGRYEEFHHARIEDGAVTAAVRLSRRYLTDRFLPDKAIDLMDEAASRVRMKSVGGTD 420 Query: 419 KTVN--------VADIESVVARIARIPEKSVSQSDRD----------------------- 447 K V V D + ++R + +++ Sbjct: 421 KLVGLRREIAGVVKDKNTAISRQDYETAAKLRDREKELHAKLEASRRSEDTRTEIRVTEN 480 Query: 448 -----------------------TLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 L L + V GQD+A+ A+ A++ ARAG+ Sbjct: 481 DIADVVAQWTGIPVQRIAAKESDRLLALETHIGRRVIGQDEAVRAVARAVRRARAGVKDP 540 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYV 541 +P+GSFLF G TGVGKTE+ L++A+ ++RFDMSEYME+HT +RL+GAPPGYV Sbjct: 541 RRPIGSFLFLGATGVGKTELARALAEAVFGTEEAIIRFDMSEYMEKHTTARLVGAPPGYV 600 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+++GG LTDAV + P +++L DE+EKAHPDVF++LLQV+++G LTD GR DFRN ++ Sbjct: 601 GYEEGGQLTDAVRRKPFSIILFDEVEKAHPDVFHMLLQVLEDGRLTDGQGRVTDFRNTII 660 Query: 602 VMTTNAGVRETE--RKSIGLI--------HQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 +MT+NAG R +IG + +EE++KIF PEF NR+D++I F+ Sbjct: 661 IMTSNAGADHLRSTRGTIGFAVGLQARADEEQAKKRVLEEVRKIFRPEFLNRVDDMIVFN 720 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L + ++VD + +++V+L ++ +++EVS A+ L KG D GARP+ R IQ N Sbjct: 721 ALGEPELSKIVDILLRDVKVRLAEQKINIEVSPSAKRVLIAKGADVKFGARPLRRAIQKN 780 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 ++ LA +L G ++V + Sbjct: 781 IEDALAEHILARDFASGDSISVRKLGDGLNFV 812 >UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LKK9_9BACT Length = 866 Score = 672 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 291/839 (34%), Positives = 453/839 (53%), Gaps = 98/839 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 L+ L L + A + + L L LL N ++R + L + V + ALR +E Sbjct: 29 LSAALTNILTYSKTEAIRFKQPIVDELCLFLGLLHNGNSRIADLLRSTGVSIEALRDAIE 88 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + L A + T +R+L+ +V + +G ++L+AI +++++ Sbjct: 89 HQFTVSVETLDAVSDNIILNETC--RRILRLSVLEARRAGSKMADEDHLLLAILRDKDNK 146 Query: 120 AAYLLRKHEVSRLDVVNFIS----------------HGTRKDEPTQSSDPGSQPNSEEQA 163 +L ++ ++ + + ++ G ++P ++Q Sbjct: 147 CLPILHQNNITYSGIASLLNPTSEVSAGFGVADEAPEGFPDEKPQGDYKHSETKTRDKQT 206 Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 ++NF T+L +LA +DP+IGRE E++R Q+L RR+KNNP+L+GE GVGK+A+ Sbjct: 207 SDTPVIDNFGTDLTKLAADEALDPVIGRENEIQRIAQILSRRKKNNPILIGEPGVGKSAV 266 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILF 283 EGLA I+ G VP ++ I SLD+ S++AGT+YRG FE R + L+K+L + ILF Sbjct: 267 VEGLANLIISGKVPRILQHRRIVSLDMASIVAGTQYRGQFEDRLQRLIKELRAHSEIILF 326 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDEIHTIIGAG+A G +DAAN++KP L+ G+I+ IG+TT E+ EKD AL RRFQK Sbjct: 327 IDEIHTIIGAGSA-PGSLDAANILKPALARGEIQCIGATTTDEYRKTIEKDGALERRFQK 385 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 I + + E+T++I+ LK +YE HH+V YT A+ A V L +YI+ R LPDKAID +D Sbjct: 386 IQLAPTTPEQTLEILRNLKKRYEEHHNVAYTDDALHACVNLTTRYISGRALPDKAIDALD 445 Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM----- 458 EAG+R +S K N+ +E +A + R ++ + + NL D + Sbjct: 446 EAGSRV---HISGVKVPENIEKLEKCIADLKRHKTEAAKAQNYELAANLRDEVAQLTDKL 502 Query: 459 --------------------------------------------LVFGQDKAIEA----- 469 + G A++A Sbjct: 503 EHANKDWIDSLKEDRPTVTAEDISTIVSMMSGIPVQRMAQDESIRLKGMKAALQAKVISQ 562 Query: 470 ------LTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFD 520 L AI R GL +P+G+FLF GPTGVGKT + L++ + +L+R D Sbjct: 563 DEAISHLVRAITRNRLGLKGTDRPIGTFLFVGPTGVGKTYLVKCLAEWMFGSKEDLIRID 622 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MSEY E+++ SRL+GAPPGYVG+D+GG LT+ V +HP++V+LLDEIEKAHPDVFN LLQV Sbjct: 623 MSEYGEKYSTSRLVGAPPGYVGYDEGGQLTEKVRRHPYSVILLDEIEKAHPDVFNTLLQV 682 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD----------AME 630 MD G LTD NG DFRN +++MT+N+G R+ + G+ ++ +TD + Sbjct: 683 MDEGRLTDGNGTTVDFRNTIIIMTSNSGTRQLKDFGRGIGFKEAATDDADGKMVEQIIRK 742 Query: 631 EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWL 690 ++K F+PEF NRLD+II F L+ ++ D I L+ +L++ +SLE++ A++++ Sbjct: 743 ALQKQFSPEFLNRLDDIITFHPLTEADAGKIADLEIGALKERLEKMQLSLELTTAAKDYV 802 Query: 691 AEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ-VTVALDKEKNELTYGFQS 748 +KG++ GAR + R IQ N++ + + ++ + Q T+ D +L F S Sbjct: 803 VKKGFNVQYGARSLKRSIQANIEDAICDLIMNETQDKTEQPQTIRFDVVDEKLVAQFTS 861 >UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=Q025Q2_SOLUE Length = 823 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 289/801 (36%), Positives = 442/801 (55%), Gaps = 84/801 (10%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 ++ + A A + ++ EHLLL LL +AL + A + + I Sbjct: 6 TEKARRVIFFARYEASQFGSPYIETEHLLLGLLRED---KALANRFLRSHAAVESIRKQI 62 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 E T + D + +RVL + + ++L+ + E++ AA Sbjct: 63 EGHTTIREKVSTSVDLPLSHECKRVLAYGAEEAERLSHKHIGTEHLLLGLLREEKCFAAE 122 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 +L + + + ++ S+ + + + F+ +L Q A Sbjct: 123 ILHERGLRLSTIREELARS------------QSEKVASARPKESSLLAEFSRDLTQAAMD 170 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 +DPLIGR+ ELER +Q+LCRR KNNP+L+GE GVGKTAI EGLA RI +GDVP +AD Sbjct: 171 NTLDPLIGRDYELERVVQILCRRTKNNPVLIGEPGVGKTAIVEGLAQRIAEGDVPSFLAD 230 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 I +LD+ ++AGTKYRG FE+R K ++K+L ++ N+I+FIDE+HT++GAG+A G +D Sbjct: 231 KRILALDLSLIVAGTKYRGQFEERLKTIMKELMENQNAIIFIDELHTLVGAGSAE-GSLD 289 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 AAN++KP LS G+I+ IG+TT EF EKDR+L RRFQ + + P+ + ++I+ G+K Sbjct: 290 AANILKPALSRGEIQCIGATTPAEFRKSIEKDRSLERRFQAVKVPPPNESDAIKILFGIK 349 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 +YE H V YT A+ AAV + +YI DR+LPDKAID+IDEAGAR +L + + Sbjct: 350 DRYEKFHAVAYTDDAIEAAVYTSSRYIPDRYLPDKAIDLIDEAGARVKLRQTTLPADLAD 409 Query: 423 --------VADIESVVARIARIPEKSVSQSDRDTLKNL---------------------- 452 V +E+ +A + S +R +N+ Sbjct: 410 IQKRIKFIVHRMENAIANHEFEKARFYSDEERKERENMRLLREKYNLDDSSTGCVTKDDI 469 Query: 453 ----------------GDRLKMLVFGQDK----------AIEALTEAIKMARAGLGHEHK 486 + + L+ +++ AI AL AI+ +RAGL ++ Sbjct: 470 EDVVARWTGVPMTSIKEEEIAKLLRIEEELHKRVISQEKAISALARAIRRSRAGLKASNR 529 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGF 543 P GSFLF GPTGVGKTEV L+ L L+RFDMSEYME+H+VS+LIG+PPGYVG+ Sbjct: 530 PAGSFLFLGPTGVGKTEVARALAGFLFGSEKSLVRFDMSEYMEKHSVSKLIGSPPGYVGY 589 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 ++GG LT+ V ++P++++LLDEIEKAHPD++NILLQV ++G LTD G + DF+N +++M Sbjct: 590 EEGGQLTERVKRNPYSIILLDEIEKAHPDIYNILLQVFEDGQLTDGLGNQVDFKNTIIIM 649 Query: 604 TTNAGVRETERK-SIGL-------IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 T+N G R E++ ++G E+KK F PEF NRLD +I F L+ Sbjct: 650 TSNLGARFLEKRGNLGFSIPAGEAGSTKVEDMVRSEVKKAFNPEFLNRLDEVILFMSLTD 709 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEK-GYDRAMGARPMARVIQDNLKK 714 + Q+++ + ++ V L K V + ++ +A ++ EK DR+ GARP+ R +Q ++ Sbjct: 710 PDLIQIMELLVQQVNVNLVAKQVKIHLAPDAAKYILEKTCADRSYGARPLRRALQKYIED 769 Query: 715 PLANELLFGSLVDGGQVTVAL 735 PL+ L+ G+L + V L Sbjct: 770 PLSEALIQGTLPRPADLEVYL 790 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 6/94 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L+ E + L A H+ + EHLLL LL A E L + L +R+EL Sbjct: 80 LSHECKRVLAYGAEEAERLSHKHIGTEHLLLGLLREEKCFAAEILHERGLRLSTIREEL- 138 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVF 93 ++ AS +++ F R L +A Sbjct: 139 ---ARSQSEKVASARPKESSLLAEFSRDLTQAAM 169 >UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae RepID=Q6ETV8_ORYSJ Length = 822 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 245/614 (39%), Positives = 363/614 (59%), Gaps = 27/614 (4%) Query: 162 QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 E + + ++ A DP+IGR+ E++R + +LCRR KN+ +LVG GVGKT Sbjct: 174 APPKETALRTYGRDMTGSAAAA--DPVIGRDDEVDRVVCILCRRTKNSAVLVGAPGVGKT 231 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNS 280 AIAEGLA R+ GDVP +A + LD+GSL+AGT+YRG FE+R K ++++ E Sbjct: 232 AIAEGLARRVAAGDVPAALAGARVVELDVGSLVAGTQYRGMFEERVKKVIQEAEGAAGKV 291 Query: 281 ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR 340 ILFIDE+H ++GAGA GG +D ANL+KP L+ G+IR +G+TT+ E+ E+D A RR Sbjct: 292 ILFIDEMHMLLGAGACKGGSMDGANLLKPALARGRIRCVGATTFDEYRKHIERDAAFERR 351 Query: 341 FQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 FQK+ + EP+ + T+ I+ GLK +YE HH ++ A+ AA +LA +YI R PDKAID Sbjct: 352 FQKVIVEEPTTQATIAILQGLKQRYEEHHGLKIQDAAIVAAAQLADRYITGRQFPDKAID 411 Query: 401 VIDEAGARARLMPVSKRKKT--------------------VNVADIESVVARIARIPEKS 440 +IDEA + RL S++ V + VV+R IP + Sbjct: 412 LIDEACSTVRLKIDSQKGVNTTGMQNNNGNTSVNGVNEAIVGPDHVAQVVSRWTGIPVTT 471 Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 + Q +++ L +L DRL V GQD+A++ + +A+ +RAGL +P+GSFLF G TGVG Sbjct: 472 LDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLRSRAGLEQPGQPIGSFLFLGSTGVG 531 Query: 501 KTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 KTE+ L++ L L+RFDMSE++ +V RLIGAPP Y G GG LT+ V P Sbjct: 532 KTELAKALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAPPSYHGHQDGGQLTEKVRTRP 591 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI 617 ++V+L DE+EKA P VFN+ LQ++D+G LTD GR DF+N +++MT+N G Sbjct: 592 YSVILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFKNTIIIMTSNLGAEHLTEGVT 651 Query: 618 GLIHQDNSTD-AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK 676 G + + D M++++K F PE NRL I+ F+ LS D + +VV + + + K Sbjct: 652 GERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHDNLKEVVKIQMKSVVTSVAHK 711 Query: 677 GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 GVSL S +A + + + Y+ GARP+ R +Q N+ L+ L+ G G +++ Sbjct: 712 GVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKLSEMLITGDAGQGSTISIDAT 771 Query: 737 KEKNELTYGFQSAQ 750 +K L + + Sbjct: 772 DDKKGLNFQVLKEE 785 >UniRef50_Q9ZN31 ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT n=17 Tax=Helicobacter RepID=Q9ZN31_HELPJ Length = 742 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 294/754 (38%), Positives = 463/754 (61%), Gaps = 21/754 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVD-LVALRQELEA 60 N++L L+ A A + H T EH+LLA+L + D + Q L+ Sbjct: 4 FNKDLNEVLSHALDLALDFNHVLCTTEHVLLAILEHGIGIRIFNTLEEDGYHKMEQILKD 63 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +++Q P+ + D P VL R + +S + V +L+ I + A Sbjct: 64 YLQQYIPLKNDPTKIPDRSP------VLARVFKKMYASYLDSVGVEELLIFILEYDDCYA 117 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 + LL ++R + + ++ + + E+A ++ +T NL+ LA Sbjct: 118 SKLLDSFGITRSYFKSALLDFDNPNDINDNDI------NNEEAPKSTPLKKYTKNLSALA 171 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + +DP+IGRE+E+ R I++L RR+KNNPLL+GE+GVGKT+IAE LA +I Q +VPE + Sbjct: 172 QNNALDPVIGREEEILRVIEILGRRKKNNPLLIGEAGVGKTSIAEALALKIAQKEVPEFL 231 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + +YSLD+ ++AG KYRGDFEKR K LK+++Q+ ILFIDEIHT++GAG+++ G Sbjct: 232 QEYEVYSLDLALMVAGAKYRGDFEKRLKKTLKEIQQNGRIILFIDEIHTLLGAGSSNAGS 291 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DAAN++KP+L+ G ++ +G+TT++E+ ++FEKD+A RRF +++ EPS E I+ Sbjct: 292 LDAANILKPVLTDGSLKCLGATTFEEYRSVFEKDKAFNRRFSIVNVEEPSKEACYLILKN 351 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 + P YE HH VRY +A V+L Y++D+ LPDKAI+++DE G+ R K+ K Sbjct: 352 IAPLYEEHHQVRYNESVFKACVDLTSYYMHDKFLPDKAIELLDEVGS--RKKINPKKGKK 409 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 ++V D++ +A +IP+ ++ + L+NL LK +F Q +AI ++ AIK+ G Sbjct: 410 ISVDDVQETLALKLKIPKMRLNSDKKALLRNLEKSLKNKIFAQTEAINLVSNAIKIQHCG 469 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 L ++KPVGSFLF GP+GVGKTE+ +L+ L + RFDMSEY E H+V++LIG+P GY Sbjct: 470 LSAKNKPVGSFLFVGPSGVGKTELAKELALNLNLHFERFDMSEYKEAHSVAKLIGSPSGY 529 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VGF+QGGLL +A+ KHPH +LLLDEIEKAHP+V+++LLQVMDN TL+DN G KA F++V+ Sbjct: 530 VGFEQGGLLVNAIKKHPHCLLLLDEIEKAHPNVYDLLLQVMDNATLSDNLGNKASFKHVI 589 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L+MT+N G ++ + ++G N +K++ TPE R+R+D I+ F+ LS + + Sbjct: 590 LIMTSNVGSKD--KDTLGFFSTKN-AKYDRAVKELLTPELRSRIDAIVPFNALSLEDFER 646 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +V + +L+ ++GV L+ +E +A+K Y +GAR + ++I + +K L++ L Sbjct: 647 IVSVELDKLKALALEQGVILKFHKEVVKCIAQKSYQTTLGAREIKKIIHNEIKTQLSDIL 706 Query: 721 LFGSLVDGGQVTVALDKEKNELTYG-FQSAQKHK 753 L S ++ L EKN+L + AQK K Sbjct: 707 LLQSFKKPCKIACLL--EKNQLVLKEIKRAQKVK 738 >UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AYE5_HERA2 Length = 776 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 275/768 (35%), Positives = 422/768 (54%), Gaps = 42/768 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 LN ++ + +A AR H F+ EHLLL LL A + L V RQ ++ Sbjct: 8 LNPNIQHIMLLAQEEARSLNHSFLGPEHLLLGLLRQKEGLAVQILHELGVFYPQTRQIIQ 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + +L A + ++ +L+A+ E + Sbjct: 68 TMITPHARDEQTLLPAYLP-LAPHTKTLLDTAAREADQLNQQQIGPEQLLLALAREAKGF 126 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 Y+L + + V + + + + A + NL + Sbjct: 127 VPYILARLGLHGSIVCDSLHAAL---------QAKATEVAPAHAADTSLLAKLGINLTEE 177 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGR E+ER IQ+L RR KNN +L+GE GVGKTAI EGLA ++ G +P Sbjct: 178 ARNGRLDPVIGRSAEIERTIQILRRRTKNNVVLIGEPGVGKTAIVEGLAQQLAHGAIPSF 237 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 +++SLD+GSLLAG YRG FE+R K+++ Q+ D ++ILFIDE+H I+GAGA+ Sbjct: 238 -QKTSVWSLDVGSLLAGAIYRGQFEERLKSVIDQIS-DHDAILFIDELHMIVGAGASE-N 294 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 VDAAN++KP L+ GK+RVIG+TT+ E+S EKD AL RRFQ I + EP IEETV I+ Sbjct: 295 TVDAANMLKPALARGKLRVIGATTFDEYSQHIEKDSALKRRFQPIVVQEPGIEETVTILQ 354 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA---------- 409 G++PKYEAHH++ + +A+ A LA +YI D +LP KAID++DEA +R Sbjct: 355 GIRPKYEAHHELSLSDEALYTAARLAAQYIPDLYLPGKAIDLLDEAASRVWYYRQRQLVA 414 Query: 410 --RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 V D+ V+A IP + + ++++ L V GQ +AI Sbjct: 415 HDAASSAEAPTTVVCGRDVAQVLAIQTGIPLAQLFSDGLNRIEDIEQILSQRVIGQAQAI 474 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEY 524 +T+AI+ A AGL + +G+ LF GP+GVGKTE++ L++ L L+R DMSEY Sbjct: 475 RGVTKAIQRAFAGLKTKQDLIGALLFLGPSGVGKTELSKVLAEYLLGSNKALIRMDMSEY 534 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 E H+VSRLIGAPPGY+G+DQGG L+++V + P++V+LLD I+ AHPDV NI +Q+++ G Sbjct: 535 AEAHSVSRLIGAPPGYIGYDQGGQLSESVRRRPYSVVLLDNIDYAHPDVINIFIQILEEG 594 Query: 585 TLTDNNGRKADFRNVVLVMTTNAGVRETERKS-IGLIHQDNSTD-----------AMEEI 632 ++TD GR DFRNV+L+ T N G +R++ +G + D A+++I Sbjct: 595 SITDARGRYVDFRNVLLLCTANVGTELFKRQTGLGFRAELPEIDQVARYEHLKQQALDKI 654 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAE 692 K + +F +RL+++I F L + + + F+ +++ + + L+++ A +L + Sbjct: 655 KTSLSLDFLHRLNDVILFQPLQAEHLEVLAGLFLQDVRQMVLAHEIRLDLTSNAHTYLTD 714 Query: 693 KGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 GYD G R + +IQ ++ P++N LL G G ++ + D N Sbjct: 715 HGYDLERGVRRLRHLIQTHIVDPISNGLLHGKYRAGDELLIDCDLSGN 762 >UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding subunit n=1 Tax=Rhodococcus opacus B4 RepID=C1ASB5_RHOOB Length = 748 Score = 667 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 272/741 (36%), Positives = 416/741 (56%), Gaps = 42/741 (5%) Query: 27 VEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSF 84 EH+L+ALL + EA VD LR+ + + A+ D Sbjct: 27 PEHVLMALLDQDATIVEPVFEALGVDADDLRRSSPSVTVRRGAAASAAAPGIDADMA--- 83 Query: 85 QRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRK 144 +L+ A + + V+ ++L+A+ ++ LR R ++ + Sbjct: 84 -SLLRAAEHEARQLSDHLVSIEHLLIALAGRRDGVGEA-LRAAGADRSSMLEAVRRVRGP 141 Query: 145 DEPTQSSDPGSQPNSEEQAGG-EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLC 203 + + + ++ ++ +L +LA +DP++GR+ E+ER IQVL Sbjct: 142 AAVVDAEPERTYLGVRWRPPAVSSQVLRYSRDLTELAFRAELDPVVGRDAEIERVIQVLS 201 Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 RRRKNNP+L+G+ GVGKTAIAEGLA RIV GDVP + + + +LD+G+L+AG YRG+F Sbjct: 202 RRRKNNPVLIGDPGVGKTAIAEGLAQRIVAGDVPAALLNRRVIALDVGALVAGATYRGEF 261 Query: 264 EKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGST 322 E R K+LLK + D I+FIDE+HTI+GAGAA G VDA NL+KP+L+ G+ R +G+T Sbjct: 262 EDRVKSLLKDVVGADGGIIVFIDELHTIVGAGAAEGA-VDAGNLLKPMLARGEFRTLGAT 320 Query: 323 TYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAV 382 T E+ E D AL RRFQ + + EPS ++++ GL+ +YE+HH V T A+ AAV Sbjct: 321 TLDEYRKHVESDGALERRFQPVRVDEPSSANALEMLRGLRSRYESHHGVAITDAALSAAV 380 Query: 383 ELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT----------VNVADIESVVAR 432 L+ +YI DR LPDKAID+IDEA +R R+ S T V+ DI +V + Sbjct: 381 SLSDRYIADRFLPDKAIDLIDEACSRRRIQSDSLSSVTRGAGSCTPPLVDDDDIARLVGQ 440 Query: 433 IARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFL 492 IP + + + + L ++ RL V GQ KA+ ++ A++ +R GL ++P+ S + Sbjct: 441 WTGIPVSRLQEEELERLVHMEHRLAERVVGQAKAVVGVSAALRNSRTGLSDPNRPIASLM 500 Query: 493 FAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 F GP GVGKT + L+ + G L++ DMS+Y E+H+V+RL+GA PGYVG+++GG L Sbjct: 501 FCGPLGVGKTYLARVLADVMLDSGEALVQLDMSDYAEKHSVTRLVGASPGYVGYEEGGQL 560 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGV 609 TDAV + P+ V+LLD+IE+AHPDV +L QV+D+G+LTD GR FR+V+LVMT++ Sbjct: 561 TDAVRRRPYCVVLLDDIEQAHPDVHGLLRQVIDDGSLTDGQGRVVSFRHVILVMTSSL-- 618 Query: 610 RETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 + + + F EF RLD+++ F L + Q+VD + + Sbjct: 619 -----------------PDLGAVNQHFRAEFLTRLDDVLEFAPLRRKDLEQLVDIQVRSV 661 Query: 670 QVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGG 729 +L +G++LE++ EAR +AE G D GARP+ RV+Q L ++ +L G G Sbjct: 662 AARLSDRGIALELTHEARALIAELGDDSRQGARPLVRVVQKELISAVSRSILLGDACPGD 721 Query: 730 QVTVALDKEKNELTYGFQSAQ 750 + V + LT + A+ Sbjct: 722 TIRVDQEGTSVTLTVLSRPAE 742 >UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular organisms RepID=ERD1_ARATH Length = 945 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 289/842 (34%), Positives = 440/842 (52%), Gaps = 103/842 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQEL--- 58 + ++ + A+ + + +HLLL L++ + + + R+ + Sbjct: 83 FTERAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIAEDRDPQGFLGSGITIDKAREAVWSI 142 Query: 59 ----EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFS 114 + +Q + + D ++S +RV + AV + ++ + ++ V +F+ Sbjct: 143 WDEANSDSKQEEASSTSYSKSTDMPFSISTKRVFEAAVEYSRTMDCQYIAPEHIAVGLFT 202 Query: 115 EQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGS--------------QPNSE 160 + A +L++ + + + + +P S + Sbjct: 203 VDDGSAGRVLKRLGANMNLLTAAALTRLKGEIAKDGREPSSSSKGSFESPPSGRIAGSGP 262 Query: 161 EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 + +E F +L A G IDP+IGREKE++R IQ+LCRR KNNP+L+GE+GVGK Sbjct: 263 GGKKAKNVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILLGEAGVGK 322 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 280 TAIAEGLA I + P + I SLDIG L+AG K RG+ E R AL+ ++++ Sbjct: 323 TAIAEGLAISIAEASAPGFLLTKRIMSLDIGLLMAGAKERGELEARVTALISEVKKSGKV 382 Query: 281 ILFIDEIHTIIGAG----AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 ILFIDE+HT+IG+G G +D ANL+KP L G+++ I STT EF + FEKD+A Sbjct: 383 ILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGELQCIASTTLDEFRSQFEKDKA 442 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 LARRFQ + I EPS E+ V+I+ GL+ KYEAHH+ +YT +A+ AAV L+ +YI DR LPD Sbjct: 443 LARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIADRFLPD 502 Query: 397 KAIDVIDEAGARARLMP----------VSKRKKTVNVADIESVVARIARIPEKSVSQSDR 446 KAID+IDEAG+RAR+ + + +I++V A + Q D Sbjct: 503 KAIDLIDEAGSRARIEAFRKKKEDAICILSKPPNDYWQEIKTVQAMHEVVLSSRQKQDDG 562 Query: 447 DTLKNLGDRLKML-------------VFGQDK--AIEAL--------------------- 470 D + + L + G D A+ ++ Sbjct: 563 DAISDESGELVEESSLPPAAGDDEPILVGPDDIAAVASVWSGIPVQQITADERMLLMSLE 622 Query: 471 -----------------TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 + A+K +R GL +P+ + LF GPTGVGKTE+T L+ Sbjct: 623 DQLRGRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYF 682 Query: 514 ---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH 570 +LR DMSEYMERHTVS+LIG+PPGYVGF++GG+LT+A+ + P V+L DEIEKAH Sbjct: 683 GSEESMLRLDMSEYMERHTVSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAH 742 Query: 571 PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER---KSIGLIHQDNSTD 627 PD+FNILLQ+ ++G LTD+ GR+ F+N +++MT+N G + SIG I D+ Sbjct: 743 PDIFNILLQLFEDGHLTDSQGRRVSFKNALIIMTSNVGSLAIAKGRHGSIGFILDDDEEA 802 Query: 628 A---------MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV 678 A +EE+K F PE NR+D I+ F L + ++++ + +L+ +L GV Sbjct: 803 ASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGV 862 Query: 679 SLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 LEVS+ + + ++GYD A GARP+ R + + ++ PL+ L GS G V LD Sbjct: 863 GLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDDT 922 Query: 739 KN 740 N Sbjct: 923 GN 924 >UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding subunit, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CMZ1_STRSV Length = 747 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 266/751 (35%), Positives = 429/751 (57%), Gaps = 20/751 (2%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSVDLVALRQELEAF 61 L+ LN A A + + + + H+ L A E +D+ + Sbjct: 6 TNLLQEVLNAAKELAIQKHNYQVDIPHVWTVLTQPQAFALEFYTGLDLDINEFISVINQE 65 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + + Q + + +L A VT ++++++F +Q + Sbjct: 66 LAKIPVFSHTDTNRYGRQYSQRLKNLLDDAEAERAELRDEVVTVEHLILSLFHQQRNPIT 125 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 L++ + + V ++ G + S Q + + + TN NQ Sbjct: 126 VFLKQAGIDKELVAAKLNKA----------RQGKRAISPSQESRYQALSKYATNFNQWLA 175 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 +IGR+ E++ I+VLCR+ K+N +L+G GVGK+ + EG+ R++ DVPE + Sbjct: 176 DQTDRQVIGRKDEIDDIIRVLCRKEKSNAILLGFPGVGKSKVIEGVVGRLLADDVPEHLL 235 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTIIGAGAASGGQ 300 ++ L++G L+AGTKYRG+FE+RFKA+L + L IL+I++IH I+ AG G Sbjct: 236 GKEVFKLNLGGLIAGTKYRGEFEERFKAVLDEVLVAKGKIILYIEDIHQIVTAGRTE-GS 294 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA NL+KPLL+ G+I +IG+TT+ + FE D+AL RFQ++ I EP ++ + I+ G Sbjct: 295 LDAGNLLKPLLAQGQINIIGTTTFAAYRESFELDQALEGRFQRVRIEEPDQDKALAILQG 354 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA--RARLMPVSKRK 418 L+ Y+ H VR T +A++AA+ L+++Y++DR+LPDKA+D+IDEA A + +L + Sbjct: 355 LRENYQDFHGVRLTDEALQAAISLSIRYLSDRYLPDKALDLIDEACAVKKIQLGQAQTER 414 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V+ DI S+V RI I + + ++R+ L NL L+ + GQD+A++ ++EAI +R Sbjct: 415 PDVSREDIASIVERITGIKVQGIMDNEREHLLNLDKLLRQRIVGQDQAVQKVSEAILRSR 474 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIG 535 AG+ + +P+GSFLF GPTGVGKT + L++ L E++R DMSEYME+H V+RL+G Sbjct: 475 AGIQNPKRPIGSFLFLGPTGVGKTALAKALAERLFGNELEMVRLDMSEYMEKHAVARLVG 534 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 PPGYVGF++GG LT+AV + ++++LLDEIEKAHPDVFN LLQV+D G LTD+ GR D Sbjct: 535 PPPGYVGFEEGGQLTEAVRRRLYSIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTID 594 Query: 596 FRNVVLVMTTNAGVRETER--KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHL 653 F+N +L+MT+N G ++ KS + + + + ++ F PEF NR+D + F+ L Sbjct: 595 FKNTILIMTSNIGSQQILESLKSEQGLTAETQEEVLSLLQHSFKPEFLNRIDETVVFNPL 654 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + +V + +LQ +L+ + + L +S+E +LA+KGY GARP+ R I L+ Sbjct: 655 RAEDMINIVKIMVRQLQERLEHQKIQLHLSEEVYAFLAQKGYQPEFGARPIQRSIMRYLE 714 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNELTY 744 PLA L+ V V+L + + Y Sbjct: 715 TPLARYLVENKETTEMTVQVSLKDGQLDFNY 745 >UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6K4_9BACT Length = 826 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 276/801 (34%), Positives = 418/801 (52%), Gaps = 81/801 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREA--LEACSVDLVALRQELE 59 + + +L +A A + R + + HLLL + + ++ A LEA V LR+ L Sbjct: 6 FSDSCKRALQIAHREALKMRSKEIGTAHLLLGIAAEGTSSAAGLLEANGVTAEGLRRTL- 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + +P +E+ D + + L A+ +S V + +L A+ ++ Sbjct: 65 ----KIDETIPEPDEQTDLPFSDGARGCLDAALNSARSLDAELVDPSCLLAAVLKVNDNG 120 Query: 120 AAYLLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 A LL VS R ++ R++ P S G N E + F + Sbjct: 121 ACRLLATLGVSPETLRERAAELLASSKREESPVHSPKAG---NGEGDEAELAIIGQFCVD 177 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L A G +DP++GR+KE R +QVLCRR KNNP+LVG+ GVGKTA+ EGLA I Sbjct: 178 LTARAAAGELDPIVGRQKETRRLMQVLCRRTKNNPVLVGDPGVGKTAVVEGLAQLIQSEM 237 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VP+ + I L++GSL+AG KYRGDFE+RF+ L+ Q + + ILFIDEIHT+IG G Sbjct: 238 VPDPLKGKKILQLNVGSLVAGAKYRGDFEERFQKLIAQASKSKD-ILFIDEIHTLIGTGN 296 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 A G +DAAN++KP L+ G++R+IG+TT E+ E+D AL RRFQ IDI EP + V Sbjct: 297 AE-GSLDAANMLKPSLARGELRIIGATTAAEYRRYIERDGALERRFQPIDIAEPDFDSAV 355 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 I++GL P+YE HH V Y +A AV L+ +++ DR LPDKAID+IDEAGA+A+L Sbjct: 356 AIVSGLLPRYEEHHGVVYAPEAAETAVRLSSRFLTDRRLPDKAIDLIDEAGAKAQLDRSD 415 Query: 416 KRKKTVNVADIESVVARIARIPE--------KSVSQSDRDTLKNLGDRLK---------- 457 + V + R + +T + L + L Sbjct: 416 WPPELKEVKTRLGQLRRDKEAAILAADFELAGRFRSDEAETAQQLEENLSVWRRGRRMSG 475 Query: 458 ---------------------------------------MLVFGQDKAIEALTEAIKMAR 478 + GQ +A+ + A++ R Sbjct: 476 SRVGPDDLAQVLSSWCGVPVGQMSQSEAERLLTLESRVEKHLIGQSEAVSCVCRALRRNR 535 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIG 535 +GL E +P+GSFLF GP+GVGKTE+ +++ L L+ DMSE+ +R+TVSRLIG Sbjct: 536 SGLQDEKRPIGSFLFLGPSGVGKTELARVVARELYGSDKALIALDMSEFHDRYTVSRLIG 595 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 PGYVG++ G LT+AV +HP++V+LLDEIEKA P V ILLQ+M++G LTD +G D Sbjct: 596 TGPGYVGYEDRGQLTEAVRRHPYSVVLLDEIEKADPQVNRILLQIMEDGRLTDGHGDTVD 655 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-----EEIKKIFTPEFRNRLDNIIWF 650 FRN +++MT+N G RE + G S A +E+K+ F PE R+D++++F Sbjct: 656 FRNALIIMTSNLGSREAAKSPFGFSDAGRSDQAARGVMSDELKRFFPPELLGRMDDVVYF 715 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L+ + + ++ D + +L ++G+ VS + + + ++ + GARP+ R+++ Sbjct: 716 RQLNAEDLSKIFDLLLAPAVQRLKRRGIDFSVSPQLKLAILDEAARQGAGARPLRRLVEK 775 Query: 711 NLKKPLANELLFGSLVDGGQV 731 + P A L+ G V Sbjct: 776 RVSDPTAEWLIANPGASGELV 796 >UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bacteroidales RepID=B0MVC3_9BACT Length = 819 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 287/747 (38%), Positives = 424/747 (56%), Gaps = 80/747 (10%) Query: 70 PASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV 129 P S + + + R LQR + V+ A+ L+ I S+ + + +L + Sbjct: 75 PDSSRQNPEEFFPLYTRELQRLFAPMHH-----VSTAHALLHIVSDPHTITSQVLAMYHF 129 Query: 130 SRLDVVNFISHGTRKDEPTQSSDPG------------SQPNSEEQAGGEERMENFTTNLN 177 + + T + + T D +P + ++ F T+L Sbjct: 130 DAQAIATELQKMTLEADQTTPPDTNFRPTPELRFIGLREPVRDTPPAEPALLDKFGTDLT 189 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 AR G IDP++GRE+E+ER +Q+L RR+KNNP+L+GE+GVGK+AI EGLA R+ +VP Sbjct: 190 YEARRGRIDPVVGREREMERIVQILSRRKKNNPILIGEAGVGKSAIVEGLALRMAADEVP 249 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + +YSLD+ SLLAGTKYRG+FE+R + LL++L + +SILFIDEIHTI GAG+ Sbjct: 250 ATIRGKRLYSLDVSSLLAGTKYRGEFEERMQRLLEELRRKQDSILFIDEIHTIAGAGSTQ 309 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +D AN++KP L+ G+++VIG+TT E+ E D AL RRFQKI + S EET+QI Sbjct: 310 -GSLDTANILKPALARGELQVIGATTLDEYREDIESDPALERRFQKILVEPASEEETLQI 368 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM----- 412 ++ + P YE HH VRY+ +A+RA V L +YI DR+ PDKAIDV+DEAGAR L Sbjct: 369 LHNIAPHYERHHGVRYSDEALRACVALTGRYITDRNFPDKAIDVLDEAGARIHLQDKGKT 428 Query: 413 --------------------------------------------PVSKRKKTVNVADIES 428 P + IE Sbjct: 429 EKPSRKTASREPVGAAAGAKTPKNRSRKTAAADTTTVGGAVWTLPSDPGPPEIRAEHIEQ 488 Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 V+ + IP + +S S+ + L+ L D L V GQ +A+E ++ +I+ +RAGL E +P+ Sbjct: 489 VITSMTGIPAERLSGSESERLRGLADYLSARVIGQCEAVEKISRSIQRSRAGLKDEGRPI 548 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQ 545 G F+F GPTGVGKT + +LSK L E L+R DMSEY E+H V+RLIG+PPGYVG+ + Sbjct: 549 GVFMFVGPTGVGKTLLAKELSKWLFDENKGLIRIDMSEYSEKHNVARLIGSPPGYVGYGE 608 Query: 546 GGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTT 605 GG LT+AV +HP++V+L DEIEKAHP+VFN LLQ+ D G LTD +GRK DFRN V+++T+ Sbjct: 609 GGQLTEAVRRHPYSVVLFDEIEKAHPEVFNTLLQIFDEGHLTDGSGRKVDFRNTVIILTS 668 Query: 606 NAGVRETERKSIGLIH----------QDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 N G R +S + + + ++ +++ F PEF NR+D+I+ F L Sbjct: 669 NVGSRAAAIRSTQVGYSTCSKSDTQQKAPQSEYRRALEETFAPEFLNRIDDIVIFRTLDL 728 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 + +++D + L + D+ G +E++ EA+ LA GY R G R + R + + +++P Sbjct: 729 SDVERIIDLELKGLLSRTDRLGYKVEITDEAKRTLAAIGYQRKYGVRALRRTLLERIEEP 788 Query: 716 LANELLFGSLVDGGQVTVALDKEKNEL 742 L+ ++ G L G +V V D EK + Sbjct: 789 LSGLIIDGKLHSGERVIVEPDGEKEVI 815 >UniRef50_A7I2C9 ATP-dependent CLP protease ATP-binding subunit n=3 Tax=Campylobacter RepID=A7I2C9_CAMHC Length = 729 Score = 655 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 279/741 (37%), Positives = 436/741 (58%), Gaps = 26/741 (3%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVL 69 AR++R+ ++T H+L + +E ++ ++ I Q Sbjct: 10 FKNGVRVARKYRNNYLTTYHILFSFFRYDVFKEFFYYYG-----MQNDVGETIRQIIENF 64 Query: 70 PASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIF---SEQESQAAYL-LR 125 P S+ ++ L L+ + + G N+ ++ +F E+ Sbjct: 65 PKSKNKK-----LKMTTELKYLINQINEIGTNKNEYEDIFRFMFLARKMDENYRELFDFI 119 Query: 126 KHEVSRLDV-VNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGG 184 S + + F R+ + S N +E +E + NL + AR+G Sbjct: 120 TPNDSYESLSLTFFEWLKRQKSIPMAEFLDSFENQDENEDQRSPLEIWGRNLCEEARLGK 179 Query: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCT 244 +D LIGREKE+E+ +Q LCRR+KNNPLLVGE+GVGKTA+ EG+A +I D PE + + Sbjct: 180 LDKLIGREKEVEKTLQTLCRRKKNNPLLVGEAGVGKTAVVEGIAQKIAFNDGPEKLKNKE 239 Query: 245 IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA 304 IY +++ S+LAGT YRGDFE+R L+ +L+ N I+F DEIHTI+GAG+ G D A Sbjct: 240 IYEINLTSMLAGTTYRGDFEQRVNDLIDELKNKKNVIIFFDEIHTILGAGSTGGSDADLA 299 Query: 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPK 364 + +KP L++G+I IG+TTY EF + F KD+AL RRF KIDI EP++E++ +I+ G P+ Sbjct: 300 DALKPALANGEISCIGATTYAEFRD-FGKDKALLRRFNKIDICEPTLEDSFKILKGGAPR 358 Query: 365 YEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA 424 YE H V+++ + + V L+ KY++D+ LPD A D+IDE GA L +V Sbjct: 359 YENFHGVKFSDEILNECVRLSKKYLSDKFLPDSAFDLIDEIGASFSLKGRHGEVSQDDVR 418 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 I SV+A ++++ + + LKNL LK +FGQD A++ L +A+ + AG+ E Sbjct: 419 KILSVMAN-----AENINSDNSEILKNLKTNLKSEIFGQDSAVDTLYKALLRSYAGIKDE 473 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 ++P+G FLF G +GVGKTE+ L+ +L + LRFDMSEYME ++VS+ IG+ PGYVGF+ Sbjct: 474 NRPIGVFLFTGNSGVGKTELAKVLANSLNVSFLRFDMSEYMEENSVSKFIGSAPGYVGFE 533 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 QGG+LT+AV KHP++VLL DEIEKA+P + NI L + DN +L+DN G KADF+N +++M+ Sbjct: 534 QGGILTNAVKKHPYSVLLFDEIEKANPTIINIFLGIFDNASLSDNLGEKADFKNTIIIMS 593 Query: 605 TNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 +N G +E ++G +D + + F+PE R R+D II F+ L+ +++ Q+VDK Sbjct: 594 SNLGTKEA--ATLGF-KRDTAEKINTAVHDFFSPELRARIDKIINFNPLNNEILKQIVDK 650 Query: 665 FIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 +I L+ +L K V ++ + A+ +L +KG + GAR + R+I + ++ E+LFG Sbjct: 651 YIKNLENKL--KNVKFDLDENAKEFLIKKGANTESGARNLKRIIDGEISDIISGEILFGK 708 Query: 725 LVDGGQVTVALDKEKNELTYG 745 L +GG V ++ + EK + Sbjct: 709 LKNGGTVKISTENEKLTFEFN 729 >UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain, putative n=2 Tax=Theileria RepID=Q4U8P5_THEAN Length = 916 Score = 654 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 256/817 (31%), Positives = 430/817 (52%), Gaps = 82/817 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELE 59 + L ++ A+ + H+ L L+ A + L+ V + + R + Sbjct: 74 FSDNAIKVLMLSLEEAKLSNQPSVESAHIFQGLVCLNQGLAFKILKEFGVTVNSARNAAK 133 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + PV + + + + S + L + + G + + ++L+ + ++ + Sbjct: 134 S----SYPVDESKKVKNLPTFSNSAKNALDYSSTEAERLGNSTIETEHLLLGVLNDTTKE 189 Query: 120 AAYLLRKHEVS----------RLDVVNFISHGTRKDEPTQSSDPGS---QPNSEEQAGGE 166 + + ++ ++ + I E Q S P P + Sbjct: 190 MSTFYKNLDLDVTLAIDTTVRTIEKIKEIKESNSLSENIQESSPNFVYLSPTMNRDELAQ 249 Query: 167 ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 + FT +L + AR G + +I R+ E+ERAI L R K+NPLLVGE GVGKTAI EG Sbjct: 250 SCISLFTVDLTEKARNGQLPKVIHRDNEIERAIITLSRMTKSNPLLVGEPGVGKTAIVEG 309 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDE 286 +A +I QG ++ I L G L+AGTK+RG FE+R L+ +++ + IL IDE Sbjct: 310 IANKISQGISQPQISKKRILQLQFGLLIAGTKFRGQFEERLTKLIDEIKSSGDIILVIDE 369 Query: 287 IHTIIG---------AGAASG-GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 H +IG GA +G G +DAANL+KP LS G+I+ I TT +E+ FEKD A Sbjct: 370 AHMLIGMKFIYNNNKLGAGAGDGSIDAANLLKPPLSRGEIQCIAITTPKEYKKYFEKDMA 429 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L+RRF I + EPS E+T++I+NG+ Y H V YT ++++ A++ + +YINDR LPD Sbjct: 430 LSRRFHPIYVDEPSEEDTLKILNGISSSYGEFHGVEYTQESIKLALKYSKQYINDRFLPD 489 Query: 397 KAIDVIDEAGARARLMPVSKRKKT------------------------------------ 420 KAID++DE+G+ A++ ++ K+ Sbjct: 490 KAIDIMDESGSFAKIQYQNELKREKNELTSATETEGNGETESNPENEVEQVVEKKEQNVL 549 Query: 421 --VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V + V++ IP K +++ + + ++N+ + L +V GQ++A++ + +AI+ A+ Sbjct: 550 GQVKPEHVAEVMSIWTGIPLKKLTRGEMEIIRNMEEDLHKMVIGQEEAVKNVCKAIRRAK 609 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG--IELLRFDMSEYMERHTVSRLIGA 536 + + ++P+GSFLF GP GVGK+EV L+K L L+R DMSEY E H++SR++G+ Sbjct: 610 TNIKNPNRPIGSFLFCGPPGVGKSEVARALTKYLFAKENLIRIDMSEYTEPHSISRILGS 669 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGY G D GG LT+ V +P++V++ DEIEKAH DV NILLQ++++G LTD+ + F Sbjct: 670 PPGYKGHDTGGQLTEKVKSNPYSVVMFDEIEKAHHDVLNILLQILEDGKLTDSKNQTISF 729 Query: 597 RNVVLVMTTNAGVRETERKSIGL------IHQDNSTD-------AMEEIKKIFTPEFRNR 643 +N +++MT+N G +R S G+ + D S+D MEE+K F PE NR Sbjct: 730 KNTIIIMTSNTGSNVIQRSSKGVHTFGFTVDSDESSDYLKIKALVMEELKSHFLPELINR 789 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 +D++I F LS + ++ + +L + + G+ +E+S++ +++ + D GARP Sbjct: 790 IDDVILFKPLSESELKEIAKLMLNDLTARANSAGILIEISEKFADYILKLPRDDKSGARP 849 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 + R+I L+ LA+ ++ TV +D+ + Sbjct: 850 LRRLITSVLEDKLADLVISDDFDSNNTYTVTVDEADS 886 >UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subunit n=67 Tax=Bacilli RepID=C5WHX6_STRDG Length = 763 Score = 654 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 254/656 (38%), Positives = 390/656 (59%), Gaps = 60/656 (9%) Query: 155 SQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVG 214 +QP + Q +E F N+ +AR G IDP+IGR+ E+ R I++L RR KNNP+L+G Sbjct: 107 TQPQTPNQQAKG-LLEEFGINVTDIARHGDIDPVIGRDDEITRVIEILNRRTKNNPVLIG 165 Query: 215 ESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL 274 E GVGKTA+ EGLA +IV G VP + + LD+ SL+ GT RG FE+R + L++++ Sbjct: 166 EPGVGKTAVVEGLAQKIVDGTVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEI 225 Query: 275 EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD 334 Q + ILFIDEIH I+GAG+A G +DA N++KP L+ G+++++G+TT E+ I EKD Sbjct: 226 RQRKDVILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYR-IIEKD 284 Query: 335 RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHL 394 AL RR Q + + EPS+EET+ I+ G++PKYE +H V+Y+ A+ AA L+ +YI DR L Sbjct: 285 AALERRMQPVKVDEPSVEETITILKGIQPKYEDYHHVKYSPAAIEAAAHLSNRYIQDRFL 344 Query: 395 PDKAIDVIDEAGARAR-------------------------------------------- 410 PDKAID++DEAG++ Sbjct: 345 PDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLIEAENLKAQATRDEDYERAAYFRDQIAKY 404 Query: 411 -----LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDK 465 + + IE+++ + IP + + ++ L NL + LK V GQD Sbjct: 405 KEMQAQKVDEQDIPIITEKTIEAIIEQKTNIPVGDLKEKEQSQLVNLANDLKAHVIGQDD 464 Query: 466 AIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMS 522 A++ + +AI+ R GLG ++P+GSFLF GPTGVGKTE++ QL+ L ++RFDMS Sbjct: 465 AVDKIAKAIRRNRVGLGTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMS 524 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 EYME+H V++L+GAPPGYVG+++ G LT+ V ++P++++LLDE+EKAHPDV ++ LQV+D Sbjct: 525 EYMEKHAVAKLVGAPPGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLD 584 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRETERK-SIGLIHQDNSTDAMEEIKKIFTPEFR 641 +G LTD GR F++ +++MT+NAG ++E G + ++ + E+ F+PEF Sbjct: 585 DGRLTDGQGRTVSFKDTIIIMTSNAGTGKSEASVGFGAAREGRTSSVLGELSNFFSPEFM 644 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 NR D II F LS D + +VD + ++ +L G+ L+V+Q+ + L + GYD MGA Sbjct: 645 NRFDGIIEFKALSKDNLLHIVDLMLEDVNKRLSYNGIHLDVTQKVKEKLVDLGYDPKMGA 704 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAA 757 RP+ R IQD ++ + + L + + + ++A+K + A Sbjct: 705 RPLRRTIQDYIEDAITDYYLEHPTEKDLRAIMTSNS-----NIMIKAAKKDETVTA 755 >UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma subunit n=1 Tax=Thalassiosira pseudonana RepID=B8BXC6_THAPS Length = 890 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 274/771 (35%), Positives = 421/771 (54%), Gaps = 52/771 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALR---QE 57 +++E SL A + + E + L ++ P AR L++ + L + + Sbjct: 76 MSEECIGSLVTAQNESARLGQSTVGCEVMTLGIIDRPEKARRTLKSYGITLRKAKLTVET 135 Query: 58 LEAFIEQTTPVLPASEEERDTQP--TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE 115 + + +L +++ RD + + +RVL A S V +VL+A+ Sbjct: 136 INNIFTMSPQLLNMNKKARDVELPFAPALKRVLTFAGAIADSLDSPTVNSEHVLLALMEG 195 Query: 116 QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGE---ERMENF 172 +S + F + G P GGE + Sbjct: 196 VDS-----------TTFSAAEFCRRLVMDIKYPNEPMVGEGPQLVSGNGGELSTPTLSEV 244 Query: 173 TTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 +L LA +DP+ GR++E+ A++ L RRRKNNP L+GE GVGKTAIAEG+A + Sbjct: 245 GVDLTDLAARMELDPVHGRDEEVRAALRTLVRRRKNNPCLMGEPGVGKTAIAEGVAQILA 304 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL--EQDTNSILFIDEIHTI 290 P ++ + I SL++ +L+AGTKYRG+FE+R +A+++++ E+ +ILFIDEIHT+ Sbjct: 305 A---PNMLRNHRIISLELANLVAGTKYRGEFEERLQAIVEEVTDERAPPTILFIDEIHTL 361 Query: 291 IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 350 +GAG+A GG +DAAN++KP L+ GK++VIG+TT E+ EKD AL RR Q + + EP+ Sbjct: 362 VGAGSAEGG-IDAANMLKPALARGKLQVIGATTISEYRKYIEKDAALERRLQPLMVKEPT 420 Query: 351 IEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR 410 I++TVQI+ + +Y AHH VRYT +++ AA +L+ +Y+ DR LPDKAID++DEAGA Sbjct: 421 IDQTVQILEAIAEQYGAHHGVRYTPESLVAAAKLSERYVTDRFLPDKAIDLLDEAGASVH 480 Query: 411 LMPV-----SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDK 465 + S V DI S++++ IP ++ ++ TL L L V GQ++ Sbjct: 481 IEHAFNPSGSTNTPEVTDQDISSIISQWTNIPIGKLTSTESSTLLTLESSLASRVKGQER 540 Query: 466 AIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMS 522 AI+++ A++ AR+GL +PV SFLF G TGVGKT + L+ +++R DMS Sbjct: 541 AIKSIARAVRRARSGLRDAGRPVASFLFCGSTGVGKTWLAKSLAAQYYGSEKDMVRIDMS 600 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 EYME+HT SRL G PPGYVG+++GG LT+AV + PH+V+LLDEIEKAH DV N+LLQVM+ Sbjct: 601 EYMEKHTASRLTGPPPGYVGYEEGGQLTEAVRRAPHSVVLLDEIEKAHRDVLNVLLQVME 660 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQ--------DNSTD------- 627 +G LTD GR F+NV+LVMT+N G + G + D + D Sbjct: 661 DGVLTDGKGRTICFKNVILVMTSNVGSAKIMELVNGDAGEFDSDTTSLDAAEDYAALSEV 720 Query: 628 AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV-ELQVQLDQKGVSLEVSQEA 686 EE+ K PE NR+D II F L + + + + ++ ++ ++L S Sbjct: 721 VQEELTKEMKPELLNRIDEIIVFSPLGDENLRDIAKAIVDASIERAFKERSITLSASDSL 780 Query: 687 RNWLAEKGYD--RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 + + G GARPM R Q + +++ ++ G L + TV + Sbjct: 781 IDAVVMDGSMNAAEFGARPMRRAAQRLFEDAVSDAIVRGFLQEDDHATVDM 831 >UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding subunit n=25 Tax=Bacteria RepID=CLPC_CHLMU Length = 870 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 266/814 (32%), Positives = 429/814 (52%), Gaps = 100/814 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 + + +A A+ H ++ EH+LL LL A L VD + E+E Sbjct: 21 FTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAKNEVE 80 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I P + D T ++ + A N V ++L+ I ++ + Sbjct: 81 RLIGYG----PEIQVYGDPALTGRVKKSFESANEEASILEHNYVGTEHLLLGILNQADGV 136 Query: 120 AAYLLRKHEVS----RLDVVNFISHGTRKDEPTQSSDP----------------GSQPNS 159 A +L + R +++ + + P+ S P G Sbjct: 137 ALQVLENLHIDPKEIRKEILKELETFNLQLPPSSSITPRNTNSSSSSSSKSSSLGGHSLG 196 Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 ++ ++ + +L ++ + +DP+IGR E+ER I +LCRRRKNNP+L+GE+GVG Sbjct: 197 GDKPEKLSALKAYGYDLTEMFKEARLDPVIGRSAEVERLILILCRRRKNNPVLIGEAGVG 256 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN 279 KTAI EGLA +IV G+VPE + + +LD+ ++AGTKYRG FE+R KA++ ++ + N Sbjct: 257 KTAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGN 316 Query: 280 SILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 +LFIDE+HTI+GAGAA G +DA++++KP L+ G+I+ IG+TT E+ EKD AL R Sbjct: 317 ILLFIDELHTIVGAGAAEGA-IDASHILKPALARGEIQCIGATTLDEYRKHIEKDAALER 375 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 399 RFQKI + PS++ETV+I+ GLK KYE HH+V T +A+ AA +L+ +Y++ R LPDKAI Sbjct: 376 RFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAAAKLSDQYVHGRFLPDKAI 435 Query: 400 DVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNL---GDRL 456 D++DEAGAR R V+ + + +E+ + + E+++ + + +L +L Sbjct: 436 DLLDEAGARVR---VNTMGQPSELLRLEAEIESTKQAKEQAIGTQEYEKAASLRDEEKKL 492 Query: 457 KML----------------VFGQDKAIEALT----------------------------- 471 + V ++A+ + Sbjct: 493 REKLSNMKQQWESNKEEHQVPVDEEAVAQVVSVQTGIPAARLTEAESEKLLMLENTLQKK 552 Query: 472 ------------EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IEL 516 AI+ +R G+ ++P+GSFLF GPTGVGKT + Q++ + L Sbjct: 553 VIGQDQAVASICRAIRRSRTGIKDPNRPMGSFLFLGPTGVGKTLLAQQIAVEMFGGEDSL 612 Query: 517 LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNI 576 ++ DMSEYME+ ++++G+PPGYVG ++GG LT+ V + P+ V+L DEIEKAHPD+ ++ Sbjct: 613 IQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDL 672 Query: 577 LLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER-KSIGLIHQDN------STDAM 629 +LQ+++ G LTD+ GRK DFRN +++MT+N G + IG + + Sbjct: 673 MLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKTGEIGFGLRSHMDYGVIKEKID 732 Query: 630 EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNW 689 +KK PEF NRLD + F L + + +++ I +L +L ++L + ++ Sbjct: 733 AAVKKHLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNHQMALNIPDSVVSF 792 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELLFG 723 L +KG+ MGARP+ RV++ L+ PLA LL Sbjct: 793 LVDKGHSPEMGARPLRRVVEQYLEDPLAEMLLKE 826 >UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ClpA n=16 Tax=Campylobacter RepID=A7H2P9_CAMJD Length = 709 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 299/745 (40%), Positives = 464/745 (62%), Gaps = 42/745 (5%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACS-VDLVALRQELEAF 61 + L+ L+ A + + HEF+T EH+L ALL + ++ E S DL L EL+ Sbjct: 5 ENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSTDFKDIFEEFSDGDLELLETELKNH 64 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 I Q V+ +++ +PT+S V+ + + + NE+ + L + + S ++ Sbjct: 65 ISQNNKVI-----KQEIEPTIS---VVLDEILLLSKNKNNEIKIIDFLEKLIQDSRSYSS 116 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 YLL+KH ++ + +H + + N T++L LA+ Sbjct: 117 YLLKKHNINLNKIQELQNHEN-----------------------IQNLSNHTSDLTLLAQ 153 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G IDPLIGR+ ELER +Q+L RR+KNNP+LVGE+GVGKTAI EGLA I + VP+ + Sbjct: 154 NGKIDPLIGRKFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAEKKVPKNLQ 213 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 + I+SLD+ S+LAGTKYRGDFEKR K +L +LE+ N+ILFIDEIHTI+GAG+ Sbjct: 214 NAKIFSLDMASILAGTKYRGDFEKRIKEILNELEKIPNAILFIDEIHTIVGAGSTGESHT 273 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 D +NL+KP LS+G ++ IG+TT+ E+ N F+K++ L+RRF KI++ EPS EE++QI+ GL Sbjct: 274 DFSNLLKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGL 333 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTV 421 K KYE H ++ + ++ AV K+ ND+ LPD AID++DE GA L P K KK Sbjct: 334 KNKYEEFHHIKLNDEILQYAVIWGKKFFNDKFLPDCAIDLVDELGASFALNP--KAKKNA 391 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 N+ D+++V+A++ K L NL LK +FGQD+ I++L ++K + AG Sbjct: 392 NLKDLKNVLAKMTH-HHKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGF 450 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYV 541 + + P G FLF G +GVGKTE+ L++ LG+ L RFDMSEY E+H +S+LIG+P GY+ Sbjct: 451 KNSNTPRGVFLFTGSSGVGKTELCKALAEFLGLNLERFDMSEYAEKHAISKLIGSPAGYI 510 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 GF++GGLL++A+ K+P +++L DEIEKAHPD+ N LQ+ DN LTDN+G K DF+N ++ Sbjct: 511 GFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFKNTII 570 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 +MT+N G++E+ +G + + N + IK F PEF NR+D I+ F+ L+ ++ ++ Sbjct: 571 IMTSNLGLKESNE--LGFLSK-NEEKSNRAIKDFFAPEFINRIDKILHFNDLNDAILVKI 627 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 ++K + E+ L+ + L V +A+ +LA+K Y++ G R + R+I + + + +++E+L Sbjct: 628 IEKELDEISKNLN--NIKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISDEIL 685 Query: 722 FGSLVDGGQVTVALDKEKNELTYGF 746 FG L GG + L + +L + F Sbjct: 686 FGKLKKGGIAKIKL-GKNGKLEFIF 709 >UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5LIJ2_9ALVE Length = 895 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 284/760 (37%), Positives = 419/760 (55%), Gaps = 50/760 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 L+ +++ A + +E LL+ L S A + L V + L+ Sbjct: 150 LSDSSARAIHRAQEE--SMNLATVPLEGLLIGLASERSGGASKLLREAGVQVAELK---H 204 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 Q P L + V++ V Q +T +L E Sbjct: 205 LAPLQAAPDLVSWGAVERVPLDDEVVEVIRGCVDKAQGP----ITTEALL-------EGV 253 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQP--NSEEQAGGEERMENFTTNLN 177 +L + +++ + ++ + D P G +E+ NL Sbjct: 254 IGKMLARPAGMEPELMGRLQSVLQRLQEWGEEDAEKIPVGGFVPGTSGGSVLESCGRNLT 313 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 LAR G + +GR+ E+ R IQVL R KNNP+L+GE GVGKTA+AEG+A I +G+VP Sbjct: 314 ALAREGKLLKCVGRDAEIGRMIQVLSRMTKNNPVLLGEPGVGKTAVAEGMAELIARGEVP 373 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAA 296 +A I+ + IGSLLAGTKYRG+FE+R K L+K+ D IL IDE+HTI+GAGA Sbjct: 374 THLAGVAIWDVSIGSLLAGTKYRGEFEERLKRLVKEATDADGKIILLIDELHTIVGAGAT 433 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 G +DAAN++KP LS G++RVIG+TT E+ KD AL RRFQ + + EP+ + V Sbjct: 434 GDGAIDAANILKPALSRGELRVIGATTQSEYDKYIAKDPALERRFQPVVVPEPTQAQAVD 493 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM--PV 414 ++ G+ YE HH VR+T A+ A V+L+ +YI R LPD A D +DEA AR R+ Sbjct: 494 MLMGVASLYEEHHFVRFTDDAIEACVKLSSRYIPSRRLPDSAFDAMDEAAARKRIQQGAR 553 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 + VN D+ VA+ IP + +++ + L ++ +RL V GQ +A A+ AI Sbjct: 554 PSSRIEVNANDVAQTVAQWTGIPLEELTKDESARLLHMEERLDSRVIGQKRATSAVARAI 613 Query: 475 KMARAGLG--HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE----LLRFDMSEYMERH 528 + AR G+ +P FLF GPTGVGKTE++ LS E ++R DMSE+MERH Sbjct: 614 RRARVGVRGIGNKRPTACFLFCGPTGVGKTELSKALSDEYFGEEGRNMIRLDMSEFMERH 673 Query: 529 TVSRLIGAPPGYVGFD--QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTL 586 +VS+LIG+PPGYVG+D GG+LTD V + PH+++L+DE+EKAHPDV NILLQVMD+G L Sbjct: 674 SVSKLIGSPPGYVGYDSNSGGVLTDRVRRQPHSLVLIDEVEKAHPDVLNILLQVMDDGRL 733 Query: 587 TDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDN 646 TD++GR ADF NV+LVMT+N G +ME++K+ F PEF NR+D Sbjct: 734 TDSHGRLADFSNVILVMTSNVGS------------------SMEDLKRHFRPEFINRIDE 775 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKG-VSLEVSQEARNWLAEKGYDRAMGARPMA 705 +I FD L+ + I ++V ++ LQ L ++ + L+V+ L ++GY GAR + Sbjct: 776 VIAFDSLTEEDIVRIVGLYVSRLQAALKEQHSIDLKVTDGLTAALGKEGYSAEFGARHLN 835 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 RV+Q ++ P+A +L + G ++ D E++ + + Sbjct: 836 RVMQARIEDPIAELILREEIHRGEELIADYDSERDMIVFR 875 >UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,ClpB n=3 Tax=Gammaproteobacteria RepID=A1STR4_PSYIN Length = 828 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 288/813 (35%), Positives = 433/813 (53%), Gaps = 85/813 (10%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEA 60 Q++ L +AFA R +T + LL+ALLS P A + L+ + + Sbjct: 22 TQKVIGCLEIAFAELGSLRLNILTSDFLLVALLSQPDSEAHKILQELLPNEDDAPLRIVG 81 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 I Q P ++ + R + V + A + G + + + +A F + Sbjct: 82 QIRQKYP-PASNVQARQILASQEIVEVFRVAYDEAKDFGDDYIGTGTLFLAFFHKDAGHV 140 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A +L + + H R G Q NS++ G + ++ +T +L ++A Sbjct: 141 ADILNNEGIRVDQARQALKHIRR----------GHQLNSQDAEGKPDILDIYTKDLTEMA 190 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G +DP+IGRE+E+E IQ L RR+KNNP L+GE GVGKT I EGLA RIV DVP+ Sbjct: 191 RKGELDPVIGREEEIELIIQTLSRRKKNNPALIGEPGVGKTVIVEGLAQRIVAADVPDSQ 250 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTIIGAGAASGG 299 + + +LD+G L+AG RG+FE+R K++ +E ILFIDE+HT++GA A SGG Sbjct: 251 LNKRLLALDMGELVAGASMRGEFEERLKSVRDAVIEAGGKVILFIDELHTVVGANAGSGG 310 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA +L+K L+ G ++VIG+ T E+ E D+AL RRF I + EPSIEET+ I+ Sbjct: 311 -IDAPSLLKTALAQGTLQVIGADTLDEYQKYIETDKALERRFHPILVREPSIEETIAILQ 369 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G P+YE HHD+ Y A AA L+ +YI DR LPDKA+D+IDEAGAR L + + Sbjct: 370 GAAPRYEKHHDIHYALPAFEAAARLSERYIADRCLPDKAVDLIDEAGARKHLRLTAIPQN 429 Query: 420 TVNVADI-------------ESVVARIARIPEKSVSQSDRDT------------------ 448 ++ ++A + + + Sbjct: 430 LRDLERKHQGLLRDKTGAFNAQNFEQVAATQMEILKSDQKLKEARSDWQQGRAKEDAMVT 489 Query: 449 --------------------------LKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 L + ++L + GQ+ A+ A+ +AI+ RAG+ Sbjct: 490 SDDIAEVVARWTGIPVARMVESESEKLARMEEKLHQRIVGQEDAVRAVADAIRRNRAGIT 549 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPG 539 + +P+GSFLF GPTGVGKTE+ L+ L + ++R DMSEYMERH VS++IGAPPG Sbjct: 550 NSRRPIGSFLFLGPTGVGKTELARALAAFLLDDETRIIRLDMSEYMERHEVSKMIGAPPG 609 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 Y+G+ +GG LT+ V +P+ V+LLDE+EKAHPDVFN+LLQ++++G LTD GRK FRN Sbjct: 610 YIGYGEGGQLTERVRHNPYTVVLLDEMEKAHPDVFNMLLQILEDGQLTDAKGRKVSFRNT 669 Query: 600 VLVMTTNAGVRETE--RKSIGLIHQDNSTD------AMEEIKKIFTPEFRNRLDNIIWFD 651 V++ T+N G ++ IG IH D+ M E+KK F PEF NRLD+II F Sbjct: 670 VIIGTSNLGTGSLSPDKRPIGFIHSDSLNYKETQDLVMHEVKKFFKPEFLNRLDDIIVFH 729 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 +L + + Q+ F+ EL ++ +G+ LEV + L+ G+D GARP+ R ++ Sbjct: 730 YLEKEHVRQIAQMFVAELVERMKLRGIVLEVDNAVIDKLSADGFDPIYGARPLRREVERQ 789 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 ++ LA +++ D V V + + E+ + Sbjct: 790 IENVLAMKVVRNEFSDNSVVQVKM--QDKEIVF 820 >UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=Q9KAV7_BACHD Length = 711 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 266/659 (40%), Positives = 408/659 (61%), Gaps = 62/659 (9%) Query: 139 SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERA 198 S D+P S S+ N G ++ N+ A+ G IDP+IGR++E+ER Sbjct: 61 SSMNGSDQPVSSIAMKSKTNH----SGGGFLDQHGRNVTAEAKAGQIDPVIGRDQEVERL 116 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 IQ+LCRR KNNP+L+GE+GVGKTAI EG A RI +G+VP M + +Y L++ SL+AGT Sbjct: 117 IQILCRRTKNNPVLIGEAGVGKTAIVEGFARRIAEGNVPAKMKNKEVYELELSSLVAGTS 176 Query: 259 YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRV 318 YRG FE++ + L+++LE + ILFIDEIH ++GAGA S G +DA N++KP L+ G++++ Sbjct: 177 YRGQFEEKMEQLVRELEARDDVILFIDEIHMVVGAGATSEGSMDAGNILKPALARGQLQI 236 Query: 319 IGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAV 378 IG+TT E+ EKD AL RRFQ I + EP++E V+I+ G++P YEA+H V Y + Sbjct: 237 IGATTLNEYRK-IEKDPALERRFQPITVKEPTLEAAVEILKGVRPIYEAYHHVSYPDDVL 295 Query: 379 RAAVELAVKYINDRHLPDKAIDVIDEAGA------------------------------- 407 A V L+ +YI DR LPDKAID++DE G+ Sbjct: 296 EACVRLSDRYIQDRFLPDKAIDLMDEIGSALTLTSGPTTLDELKERLAEITKEKQQATAQ 355 Query: 408 ----------------RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKN 451 ++ K V VADI+ ++ + IP + + ++++ +K+ Sbjct: 356 EDYERAAKLRDEENLLHKQMNENRAEKTEVTVADIQGLIEKRTGIPVRKLQKAEQTKMKD 415 Query: 452 LGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA 511 L +RL V GQ +A+E + +AIK +RAGL +++P+ SF+F GPTGVGKTE+T L++ Sbjct: 416 LHNRLARQVIGQAEAVEKVAKAIKRSRAGLKPKNRPI-SFMFVGPTGVGKTELTKTLAQE 474 Query: 512 LG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEK 568 L ++R DMSE+ME+H+VS+LIG+PPGYVG D+GG LT+ V + P++++LLDEIEK Sbjct: 475 LFGSKEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHDEGGQLTEQVRRKPYSIILLDEIEK 534 Query: 569 AHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL---IHQDNS 625 AHPDV ++ LQ++++G LTD+ GR F++ V++MT+NAGV ++ ++G + N Sbjct: 535 AHPDVQHMFLQILEDGRLTDSQGRAVSFKDTVIIMTSNAGVG-VKKITVGFEKNVETQNK 593 Query: 626 TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQE 685 +E+I + F PEF NRLD II F+HL+ + ++VD + +L +L ++ +SL VS++ Sbjct: 594 AGILEQINQYFKPEFLNRLDAIIEFNHLTEQDLMRIVDLMLQDLGDRLAEQDISLTVSEK 653 Query: 686 ARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 A+ L + G DRA GARP+ R IQD+++ + +L+ + + V D + T+ Sbjct: 654 AKAQLVKIGSDRAFGARPLRRAIQDHVEDSITEKLIDEESI--NAIHVDYDVVQQSFTF 710 Score = 42.8 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 79/218 (36%), Gaps = 37/218 (16%) Query: 110 VAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERM 169 A ++E+ + ++ + +V G ++ P + EQ ++ Sbjct: 361 AAKLRDEENLLHKQMNENRAEKTEVTVADIQGL---IEKRTGIPVRKLQKAEQTKMKDLH 417 Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQVLCR-----RRKNNPL---LVGESGVGKT 221 +IG+ + +E+ + + R + KN P+ VG +GVGKT Sbjct: 418 NRLARQ------------VIGQAEAVEKVAKAIKRSRAGLKPKNRPISFMFVGPTGVGKT 465 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSL--DIGSLLAG-TKYRGDFEKRFKALLKQLEQDT 278 + + LA + + D + + + L+ Y G E L +Q+ + Sbjct: 466 ELTKTLAQELFGSKEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHDEG--GQLTEQVRRKP 523 Query: 279 NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 SI+ +DEI D ++ +L G++ Sbjct: 524 YSIILLDEI---------EKAHPDVQHMFLQILEDGRL 552 >UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit clpE n=161 Tax=Bacilli RepID=CLPE_LACLM Length = 748 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 255/649 (39%), Positives = 402/649 (61%), Gaps = 55/649 (8%) Query: 130 SRLDVVNFISHGTRKDEPTQSSDPGSQ-PNSEEQAGGEERMENFTTNLNQLARVGGIDPL 188 S L +F + + PTQ+ G + P + + +E F N+ + AR G IDP+ Sbjct: 67 SALQGQDFNGAASNQTPPTQTGGRGPRGPQNPRAKQPKGMLEEFGINITESARRGEIDPV 126 Query: 189 IGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL 248 IGR++E++R I++L RR KNNP+L+GE GVGKTA+ EGLA +IV GDVP+ + + + L Sbjct: 127 IGRDEEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPQKLQNKEVIRL 186 Query: 249 DIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIK 308 D+ SL+ GT RG FE+R + L+ ++ + + I+FIDEIH I+GAG+A G +DA N++K Sbjct: 187 DVVSLVQGTGIRGQFEERMQKLMDEIRKRNDVIMFIDEIHEIVGAGSAGDGNMDAGNILK 246 Query: 309 PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH 368 P L+ G+++++G+TT E+ I EKD AL RR Q + + EPS++ET+ I+ G++ +YE + Sbjct: 247 PALARGELQLVGATTLNEYR-IIEKDAALERRMQPVKVDEPSVDETITILRGIQARYEDY 305 Query: 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA------------------- 409 H V+YT +A+ AA L+ +YI DR LPDKAID++DE+G++ Sbjct: 306 HHVKYTDEAIEAAAHLSNRYIQDRFLPDKAIDLLDESGSKKNLTLKFVDPEDINRRIADA 365 Query: 410 ------------------------------RLMPVSKRKKTVNVADIESVVARIARIPEK 439 + + + DIE +V + +IP Sbjct: 366 ESKKNEATKAEDFEKAAHFRDQISKLRELQKQEVTDEDMPVITEKDIEQIVEQKTQIPVG 425 Query: 440 SVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGV 499 + + ++ L NL D LK V GQD+A++ +++AI+ +R GLG ++P+GSFLF GPTGV Sbjct: 426 DLKEKEQTQLINLADDLKAHVIGQDEAVDKISKAIRRSRVGLGKPNRPIGSFLFVGPTGV 485 Query: 500 GKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKH 556 GKTE+ QL+K L ++RFDMSEYME+H+V++LIGAPPGYVG+++ G LT+ V ++ Sbjct: 486 GKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRN 545 Query: 557 PHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK- 615 P++++LLDEIEKAHPDV ++ LQ++++G LTD GR F++ +++MT+NAG + E Sbjct: 546 PYSLILLDEIEKAHPDVMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGTGKVEASV 605 Query: 616 SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ 675 G + + + ++ F+PEF NR D II F LS + + ++VD + E+ Q+ + Sbjct: 606 GFGAAREGRTKSVLGQLGDFFSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGR 665 Query: 676 KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 + L V+Q A+ L + GY+ AMGARP+ R+IQ+N++ +A+ + Sbjct: 666 NDIHLSVTQAAKEKLVDLGYNPAMGARPLRRIIQENIEDSIADFYIEHP 714 Score = 42.8 bits (99), Expect = 0.056, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 98/266 (36%), Gaps = 35/266 (13%) Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 ++ +L S +++ + R + +S + A + Sbjct: 333 DKAIDLLDESGSKKNLTLKFVDPEDINRRIADAESKKNEATKAEDFEKAAHFRDQISKLR 392 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 L+K EV+ D+ + ++ P +EQ T L LA Sbjct: 393 ELQKQEVTDEDMPVITEKDIEQIVEQKTQIPVGDLKEKEQ-----------TQLINLADD 441 Query: 183 GGIDPLIGREKELERAIQVLCR---------RRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +IG+++ +++ + + R R + L VG +GVGKT +A+ LA + Sbjct: 442 LKAH-VIGQDEAVDKISKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLAKELFG 500 Query: 234 GDVPEVMADCTIYSL--DIGSLL-AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTI 290 + D + Y + L+ A Y G +E+ L +++ ++ S++ +DEI Sbjct: 501 SSESMIRFDMSEYMEKHSVAKLIGAPPGYVG-YEE-AGQLTERVRRNPYSLILLDEI--- 555 Query: 291 IGAGAASGGQVDAANLIKPLLSSGKI 316 D ++ +L G++ Sbjct: 556 ------EKAHPDVMHMFLQILEDGRL 575 >UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Candida albicans RepID=C4YJT6_CANAL Length = 700 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 251/600 (41%), Positives = 391/600 (65%), Gaps = 17/600 (2%) Query: 156 QPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGE 215 Q EQ +E F ++L QLA+ G +DP+IGR+ E+ R IQ+L RR KNNP+L+G Sbjct: 75 QMQQTEQGDNRPALEKFGSDLTQLAKEGKLDPVIGRDHEIRRTIQILSRRTKNNPVLIGN 134 Query: 216 SGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL- 274 +G GKTA+ EGLA RI++G+VP+ M D I +LD+ +++G KYRGDFE + K++LK++ Sbjct: 135 AGTGKTAVMEGLAQRIIRGEVPDSMKDKQIITLDLAGIISGAKYRGDFESKLKSILKEVE 194 Query: 275 EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD 334 E++ N ILFIDE H ++G G A G +DA+NL+KP L+ GK+ + G+TT +E+ EKD Sbjct: 195 EKNGNVILFIDEFHLLMGLGKAE-GSIDASNLLKPALARGKLSMCGATTIEEYRKYVEKD 253 Query: 335 RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHL 394 ALARRF + + EP++E+T+ I+ GLK +YE HH VR A+ A + +YI DR L Sbjct: 254 AALARRFSPVTVNEPTVEDTISILRGLKERYEVHHGVRIMDSALVTAALYSNRYITDRFL 313 Query: 395 PDKAIDVIDEAGARARLMPVSKRKKTVNVAD--------IESVVARIARIPEKSVSQSDR 446 PDKAID++DEA + RL S+ + +ES+ ++ + ++ Sbjct: 314 PDKAIDLVDEASSTLRLQHESRPDAIATLDRQIMTIEIELESLRKEEDQLSIDRKHKLEK 373 Query: 447 DTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTV 506 + ++ L+ V GQD+AI+A+++A+++ RAGL E++P+ SF+F GPTG GKTE+T Sbjct: 374 ELELDMNILLRQSVVGQDEAIDAVSDAVRLQRAGLTSENRPIASFMFLGPTGTGKTELTK 433 Query: 507 QLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLL 563 L++ L + ++RFDMSE+ E+HT+SRLIG+PPGYVG+++ G LT+AV + P++V+L Sbjct: 434 SLAQFLFNDKNAVVRFDMSEFQEKHTISRLIGSPPGYVGYEESGELTEAVRRKPYSVVLF 493 Query: 564 DEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR----ETERKSIGL 619 DE EKAHPD+ +LLQV+D G+LTD++G+K DF+N ++VMT+N G + G Sbjct: 494 DEFEKAHPDLSKLLLQVLDEGSLTDSHGKKIDFKNTIIVMTSNIGQEILLADKNTYEDGH 553 Query: 620 IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVS 679 I+ + + +E ++ + PEF NR+D+I+ F+ LS + +++D + E+ +L K + Sbjct: 554 INSEVKSQVLENLRHHYAPEFLNRIDDIVVFNRLSKTALKEILDIRLREIGDRLVDKRII 613 Query: 680 LEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 L+++ EA+ L + GYD GARP+ RV++ L PLA L+ G + + V V + K Sbjct: 614 LQLTDEAKTLLCDMGYDPTYGARPLNRVLRKKLLDPLAMRLIKGQVQENETVKVEVKDHK 673 >UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71_CLOTH Length = 803 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 271/688 (39%), Positives = 402/688 (58%), Gaps = 64/688 (9%) Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 + T ++ ++ ++ ++ ++ ++ + TNL A+ G Sbjct: 100 MESMGFKSSKDETESDGKTDREVKDDKNNTRTKTQDKKMPKKKKYLDTYGTNLIVKAKEG 159 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 ID +IGR +E+ER IQ+L RR KNNP+L+GE GVGKTAIAEGLA RIV DVP + + Sbjct: 160 KIDRVIGRNREIERVIQILNRRNKNNPVLIGEPGVGKTAIAEGLALRIVNRDVPVKLFNA 219 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 +Y LD+ S++AGT++RG FE R K ++++ + N IL IDEIH I+GAG A G ++A Sbjct: 220 EVYVLDLTSIVAGTQFRGQFENRMKGIIEECKALGNIILVIDEIHNIMGAGEAEGA-MNA 278 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP 363 AN++KP L+ G+I+VIG+TT E+ EKD AL RRFQ + + EPS+EET++I+ G+K Sbjct: 279 ANILKPALAKGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVDEPSVEETIEILRGIKD 338 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV--------- 414 YE++H V+ + + +RAAV L+ +YI DR LPDKAIDV+DEAG+RA + V Sbjct: 339 YYESYHRVKISDEVIRAAVILSERYITDRFLPDKAIDVLDEAGSRANIKNVVLLEYEALK 398 Query: 415 --------------------------------------------SKRKKTVNVADIESVV 430 + + V DI V+ Sbjct: 399 EELKKVQEEKENAVSADSIEDYQKAADLKVRECKLLQQIKELEQKSKDMELTVDDIAYVI 458 Query: 431 ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGS 490 +IP + +++ + + L NL +RL V GQ +A++++ AI+ RA KP S Sbjct: 459 ESWTKIPVQRLTEIEAEKLLNLEERLHKRVIGQHEAVKSVARAIRRNRADFKKRKKP-AS 517 Query: 491 FLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 F+F GPTGVGKTE+ L+ L L+R DMSEYME+HTVS+LIGAPPGYVG+D+GG Sbjct: 518 FIFVGPTGVGKTELVKALAVELFGSEEALIRLDMSEYMEKHTVSKLIGAPPGYVGYDEGG 577 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 607 LT+ V + P++V+LLDEIEKAHPDVFN+LLQ++D+G TD++GR F N VL+MT+NA Sbjct: 578 QLTEKVRRKPYSVILLDEIEKAHPDVFNMLLQILDDGRATDSHGRTVSFENTVLIMTSNA 637 Query: 608 GVRETERKSIGLIHQDN---STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 G SIG + + E +K+ F PEF NR+D II F+HL+ D + Q+VD Sbjct: 638 GTSLKA-SSIGFANDNYIALENKVKEVLKETFRPEFLNRVDEIIVFNHLTKDELKQIVDL 696 Query: 665 FIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 ++ +++ K ++++ R ++ EKGYD GARP+ R IQ ++ LA L G Sbjct: 697 MFKDVVEEVENKKMTVKFQDGVREFILEKGYDPKYGARPLRRTIQRYIEDELAEMYLKGL 756 Query: 725 LVDGGQVTVALDKEKNELTYGFQSAQKH 752 L +G + V + + + + ++ Sbjct: 757 LAEGCSIVVGV--RDGNIVFNVEKPAEN 782 >UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria RepID=A0K1M3_ARTS2 Length = 857 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 294/812 (36%), Positives = 442/812 (54%), Gaps = 85/812 (10%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L++ L++A A + H + H+L + A + D A+ + E Sbjct: 40 LLSRRTHEVLSLAGQFAVDLGHGDVDALHILRTMAGAEPATSYMRRAGADPAAVARAAEE 99 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + + S T S QR L A ++ G + ++ A+ Q++ A Sbjct: 100 RLPEKSGRAATSA----PALTPSAQRALLDAYQVARAFGSTYIDPEHLFFALVLNQDAPA 155 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQ--AGGEERMENFTTNLNQ 178 +L V+ + T EP+ + P + ++ A ++ + T+L Sbjct: 156 GQVLAAAGVTPES-FQAGARETSGTEPSGAGAPDAAASASGTGTAAATPMLDTYGTDLTA 214 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 LAR GG+DP+IGR E + I+VL RR KNNP+L+GE+GVGKTAI EGLA I G VPE Sbjct: 215 LARSGGLDPVIGRSDETAQTIEVLARRTKNNPVLIGEAGVGKTAIVEGLAQAIAAGTVPE 274 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAAS 297 + + + SLD+ ++LAGT+YRGDFE+R + ++ + ILFIDE+HT+IGAG A Sbjct: 275 QLRNKRVISLDLPAMLAGTRYRGDFEERLTKAMDEVTANPGQFILFIDELHTVIGAGGAG 334 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DA N++KP L+ G++ V+G+TT+ E+ EKD A RRFQ + + EP++E+ VQI Sbjct: 335 EGGMDAGNILKPRLARGELHVVGATTFNEYRK-VEKDPAFERRFQPVQVGEPAVEDAVQI 393 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 ++GL+ +YE HH VRYT +AVRAAVEL+ +Y+ DR LPDKAID++D+AGAR L S++ Sbjct: 394 LSGLRERYEEHHGVRYTDEAVRAAVELSARYVTDRFLPDKAIDLMDQAGARLSLKLGSRQ 453 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR---LKML--------------- 459 + ++ +++ D + L D LK Sbjct: 454 DAAALRERLVALEESKT----AAIAAEDFEAASRLRDEANALKEKLDGGAASQEGPGSES 509 Query: 460 -VFGQDKAIEALTEA----------------------------------------IKMAR 478 V G+ + E ++ A ++ R Sbjct: 510 AVVGEAEIAEIISRATGIPASRITEGDRERLARLEEDLHQRVVGQEDAVSLIAKSVRRNR 569 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIG 535 G+G +P+GSFLF GPTGVGKTE+ L+ +L ++RFDMSE+ ERHTVSRL+G Sbjct: 570 TGMGAAGRPIGSFLFLGPTGVGKTELAKALAGSLFGSEDSMIRFDMSEFGERHTVSRLVG 629 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGYVG+D+ G LT+ V ++P++++LLDE+EKAHPDVFN+LLQV+D+G LTD +GR D Sbjct: 630 APPGYVGYDEAGQLTERVRRNPYSIVLLDEVEKAHPDVFNLLLQVLDDGRLTDGHGRTVD 689 Query: 596 FRNVVLVMTTNAGVRETERKS---------IGLIHQDNSTD-AMEEIKKIFTPEFRNRLD 645 FRN V++MT+N G K+ + D + +++ PEF NR+D Sbjct: 690 FRNTVVIMTSNLGSEFLASKAGPTGFTAAGDAFGSEKALRDRVLARLRESMRPEFLNRID 749 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 I+ F L + Q+V + E +L +G+ L VS++A +W+AE+GY+ GARPM Sbjct: 750 EIVLFRKLDRAQLRQIVRLMLDETDARLRSQGIGLVVSEDAVDWIAERGYEPEYGARPMR 809 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALDK 737 RVIQ L +A+ L+ L GGQVTV+ D Sbjct: 810 RVIQRELDDRIADLLVGSGLAAGGQVTVSADG 841 >UniRef50_A0RNV1 ATP-dependent Clp protease ATP-binding subunit ClpA n=2 Tax=Campylobacter fetus RepID=A0RNV1_CAMFF Length = 732 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 295/783 (37%), Positives = 461/783 (58%), Gaps = 88/783 (11%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSV-DLVALRQELE 59 M+ L S+ A A HE++ VEH+L AL + + L + V D VALR +L Sbjct: 1 MIQNNLAKSIKQANELAISKSHEYIGVEHILYALTFDTEFLKTLSSLGVSDPVALRNDLV 60 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEV-TGANVLVAIFSEQES 118 I+Q P E + T +L S E+ + L I ++ S Sbjct: 61 GLIDQ----FPRLESPKPPVLTYKLSEILS-------SIKEEEIFDAEDFLEEILEDKSS 109 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 A +L+ H ++ + F +NLN Sbjct: 110 SAYQVLKFHGLNDEQ---------------------------------DDTSQFVSNLND 136 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 + + IDP+IGRE+E+++A+++LCR +KNNP+ VGE+GVGKTAI +G+ +IV G VP+ Sbjct: 137 MVKNSKIDPVIGREEEIQKALEILCRHKKNNPIFVGEAGVGKTAIVQGIVQKIVNGKVPD 196 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + I++LD+ SL+AG KYRG+FE+R K+++ +L+++ N I+FIDEIH+I+ +++ Sbjct: 197 RLKNSIIFNLDVSSLIAGAKYRGEFEERLKSIISKLKENKNHIIFIDEIHSIMSQNSSNE 256 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +D AN++KP L++G IR IG+TTY EF N F KD+AL RRF KID++EP+ +E I+ Sbjct: 257 NSLDVANILKPHLANGDIRCIGATTYSEFRN-FNKDKALLRRFNKIDVSEPNPDECFLIL 315 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA--------- 409 GLK YE H+V Y+ + ++ ++ELA +Y++D+ LPD AID+IDE GA+ Sbjct: 316 KGLKSTYEKFHNVTYSDEILKLSIELAKRYLSDKFLPDSAIDIIDETGAKLSIANPNKLN 375 Query: 410 ------------------------RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSD 445 + KK V +DI + V+++A I + + + Sbjct: 376 LKDETVWSYAINVDDEFDNLEAIKNEAEKNNSKKRVLKSDILNTVSKMANISNLNENSDN 435 Query: 446 RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVT 505 LKNL LK +FGQD AI+AL +A+ + AGL +KP+G FLF G +GVGK+E+ Sbjct: 436 TKILKNLKANLKAKIFGQDSAIDALNDALISSYAGLNEPNKPIGIFLFTGSSGVGKSELA 495 Query: 506 VQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDE 565 +L+ +L + R+DMSEYME+H+VSRLIGAPPGY+GF+ GGLLT+ V KHP++V+L DE Sbjct: 496 NELANSLNVHFERYDMSEYMEKHSVSRLIGAPPGYIGFESGGLLTNMVKKHPYSVILFDE 555 Query: 566 IEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS 625 IEKA+ ++ NI LQ+ D+ +LTDN+G K+DF+N +++MT+N G +E ++G +++ S Sbjct: 556 IEKANDEMINIFLQIFDSASLTDNSGNKSDFKNTIIIMTSNLGTKE--PNTLGF-NKNLS 612 Query: 626 TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQE 685 + +K F+ EFRNR+D II F+ LS D++ ++V+K I L+ K + + +S++ Sbjct: 613 DKTDKAVKGFFSSEFRNRIDKIIRFNDLSKDILEKIVEKEISNLEKM--AKKIKINLSKK 670 Query: 686 ARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 A N + +G+ GAR + RVI+D++ ++ ELLFGSL GG+V + D E + Sbjct: 671 ALNEIINQGFSDEYGARNLKRVIKDSINSSISKELLFGSLKRGGEVYIEFDGE---FKFD 727 Query: 746 FQS 748 F++ Sbjct: 728 FKA 730 >UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=1 Tax=Ectocarpus siliculosus RepID=D1J7B8_ECTSI Length = 903 Score = 647 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 280/850 (32%), Positives = 452/850 (53%), Gaps = 109/850 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 + + M+ +R H F+ E +LL LL A+ +++ +R E+E Sbjct: 5 FTERALQVIMMSQEESRRLGHNFVGTEQILLGLLGEGCGVTINAVREYGINIRKVRIEVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + T + + T +++L+ ++ + + + ++ +A+ ++ + Sbjct: 65 RLIGKGTGFV-----AIEIPFTPRAKKILEMSIKQSKDLNHSYINTEHIFLALLNDTDGI 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQ--------SSDPGSQPNSEE---------- 161 A +L+ + + ++I + ++ S + S PN ++ Sbjct: 120 CAKVLQNLGANIPRIKSYILNELDQNHEGSPKVLANVASGEQSSNPNIKQTKDLFLFDDL 179 Query: 162 --QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 + + +TT+L + A IDP++GRE E+ER IQ++ RRRKNNP+L+GE GVG Sbjct: 180 DPSSLTAPNLMEYTTDLTESAERAKIDPVVGRENEIERVIQIISRRRKNNPILIGEPGVG 239 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN 279 KTA+AEGLA RIVQ +VP + D I+ LDI LLAGTKYRG+FE+R K ++++L++ N Sbjct: 240 KTAVAEGLAQRIVQREVPSELHDYKIFVLDITLLLAGTKYRGEFEERLKRIVQELKEQKN 299 Query: 280 SILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 I+ IDE+HT++GAGAA G +DAAN++KP L+ G+++ IG+TT E+ EKD AL R Sbjct: 300 IIIVIDEVHTLVGAGAAEGA-LDAANILKPALARGELQCIGATTIDEYRQHIEKDPALER 358 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 399 RFQ + + EPSIEET+ I+ GL+ +YE HH + T +A+ AA L +YI DR LPDKAI Sbjct: 359 RFQPVWVNEPSIEETIAILKGLRLRYEQHHRLEITNEALVAAANLGAQYIADRFLPDKAI 418 Query: 400 DVI-------------------------------------------------DEAGARAR 410 D+I DE R++ Sbjct: 419 DLIDEGSARVRLVNYRLPPAVQILDKELRRILEDKDLAVREQRFETATEIRDDELSLRSQ 478 Query: 411 LMPVSKRKKT-----------VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 + + K T V DI S+VA +P +++ + L L + L Sbjct: 479 MGAIIKASNTPIPKGVLERLKVGSQDIASIVALWTGVPVTKITKDENTRLLELENVLHQR 538 Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IEL 516 V GQ +A+ A+ A++ AR G+ + +P+ SF F+GPTGVGKTE+T L+ + Sbjct: 539 VIGQKEAVSAVARAVRRARVGMRNMKRPIASFFFSGPTGVGKTELTKTLASFFFGAEDAM 598 Query: 517 LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNI 576 +R DMSE+MERHTV++LIG+PPGY+G+++GG LT+AV + P+ V+L DE+EKAHPDVFN+ Sbjct: 599 VRLDMSEFMERHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKAHPDVFNL 658 Query: 577 LLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI---GLIHQDNSTDAM---- 629 LLQ++++G LTD+ GR DF+N +L+MT+N G + + + G+ D Sbjct: 659 LLQILEDGRLTDSKGRIIDFKNTILIMTSNLGSKAIQDNDLSSQGMGFGGEKADTQKTKY 718 Query: 630 --------EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSL 680 E +K F PEF NR+D II F+ L+ I ++ + +L ++ +K ++L Sbjct: 719 AQLCNTVGESLKAFFKPEFLNRIDEIIVFEQLTKTNITEIAVIMVNDLIERVKKEKDITL 778 Query: 681 EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF--GSLVDGGQVTVALDKE 738 ++ L E+G++ GARP+ R + ++ ++ E L D V + +D + Sbjct: 779 SLTPRMMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVD 838 Query: 739 KNELTYGFQS 748 N++ Sbjct: 839 LNKVKVSISK 848 >UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax=Prevotella copri DSM 18205 RepID=D1PA52_9BACT Length = 892 Score = 647 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 272/824 (33%), Positives = 427/824 (51%), Gaps = 99/824 (12%) Query: 2 LNQELELSLNMAFARAREHRHE-FMTVEHLLLALLSNPS--AREALEACSVDLVALRQEL 58 +Q + + + A + H + HLLLA+L N L + + + Sbjct: 86 FSQITDSIIRDSIREANNYEHSKIVEPRHLLLAILRNDKNPVANWLSQLGLSYD---RAI 142 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E +EE +D + Q + + R E + ++ Sbjct: 143 EMLYPTDKDEEQKTEEPKDFKMEP------QTPDSEIPDADRQEEAENLEMAGGIEAEDD 196 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPN-SEEQAGGEERMENFTTNLN 177 + D++ ++ ++PN + + ++ F+ +L Sbjct: 197 YN---------EQNDMMETDEEPFDMEKDQNPMRLSTRPNGTPRKKSSTPTIDKFSFDLT 247 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 + A G +DP++GREKE++R +++L RR+KNNP+L+GE GVGK+AI EGLA I + Sbjct: 248 KAAAEGKLDPVVGREKEIQRVLEILGRRKKNNPVLIGEPGVGKSAIVEGLAQLINNQETS 307 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + + + SLD+ +++AGTK+RG FE+R K ++K+LE I+FIDEIHT+IGAG+ Sbjct: 308 PMFFNKRLVSLDLTAIVAGTKFRGQFEERIKNVIKELENHPEIIIFIDEIHTMIGAGSGE 367 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DAAN++KP L+ G I+ IG+TT E+ EKD AL RRFQK+ + + EET+ I Sbjct: 368 -GSMDAANILKPALARGIIQCIGATTLDEYRKSIEKDGALERRFQKVLVEPTTREETLLI 426 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 ++ +K YE HH VRYT +A+ A V+L +YI DRH PDKAIDVIDEAG+R + S Sbjct: 427 LHNIKQHYEKHHCVRYTDEALEACVKLTERYITDRHFPDKAIDVIDEAGSRVHINNASVP 486 Query: 418 KKTVNVA----------------------------------DIESVVARI---------- 433 + + +IE + A+ Sbjct: 487 APYIKLEKELKKIISKKQQAVANQNFEMAASCRDAQTKIEKEIEDMKAQWQQGEIGEYVE 546 Query: 434 -------------ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 +P + +++ + LK+L LK V QD AI + + I R G Sbjct: 547 VTAEDIANVISMMTGVPAQRMAEGESKRLKDLEHNLKHKVIAQDNAINKMVKTILRNRVG 606 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAP 537 L + P+G F+F GPTGVGKT + +L++ + L+R DMSE+ E SRL+GAP Sbjct: 607 LRDPNHPIGVFMFLGPTGVGKTYLAQKLAEEMFGSKDSLIRIDMSEFSESFNTSRLVGAP 666 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GG LT+ V + P++++LLDEIEKA+ VFN+LLQV+D G LTD NGR DFR Sbjct: 667 PGYVGYNEGGQLTEKVRRKPYSIVLLDEIEKANSKVFNLLLQVLDEGRLTDGNGRLIDFR 726 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTD----------------AMEEIKKIFTPEFR 641 N +++MT+NAG R+ + G+ + + K F PEF Sbjct: 727 NTIIIMTSNAGTRQLKDFGRGVGFTSAGIKGGLAMDEKDKEYARSIVQKSLSKQFAPEFL 786 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 NRLD+II FD L + I +++D + L ++++ G +++++A+ +A+KGYD GA Sbjct: 787 NRLDDIITFDQLDLNAIKRIIDLDLEGLVKRIEELGFHFQITEKAKEMVAKKGYDVQFGA 846 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 RP+ R IQ ++ + LL G++ G ++V + +K ELT+ Sbjct: 847 RPLRRAIQTYIEDSVCEMLLDGTMKPGDTISVGKNSKKEELTFK 890 >UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma subunit (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRH2_THAPS Length = 782 Score = 645 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 270/783 (34%), Positives = 422/783 (53%), Gaps = 46/783 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL-----SNPSAREALEACSVDLV-ALR 55 L+ +++ + + + E LL+ ++ + AR+ L + + +L+ Sbjct: 10 LSDGCIKAISFSQDASHNLGVSTLENEMLLVGMVRSAGADDIEARKILTSFGISPDGSLK 69 Query: 56 QELEAFIEQTTPVLPASEEERDTQP---TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAI 112 I++ + S+ P + S ++ L AV G V +VL+A+ Sbjct: 70 AAETVLIKRGVADINNSKSGEGLPPLPFSDSVKKTLSEAVSIADRMGSGAVLPGHVLLAV 129 Query: 113 FSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENF 172 + + + + L V+ + + + G ++ Sbjct: 130 LEYDDRYSVATEDAEKCAGLAVLQKTAESSPVTLIVVGGNEGMS---------TPTLDKV 180 Query: 173 TTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 +L ++AR G +D + GRE E+ ++ L RRRK+NP L+GE+GVGKTAIAEG+A + Sbjct: 181 GIDLTEMAREGRLDAVYGRENEIRMCLRTLGRRRKSNPCLIGEAGVGKTAIAEGVAQCLA 240 Query: 233 QG-----DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEI 287 + P + + S+D+ SL+AG K+RGDFE+R + L+K+ T +ILFIDE+ Sbjct: 241 ESLPPLPPCPRALQGFRVVSVDMASLVAGMKFRGDFEERIQNLIKEAS-STPTILFIDEL 299 Query: 288 HTIIGAGAASGGQ-VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 HT+IGAG G + AANL+KP L+ G+IRVIG+TT E+ EKD AL RRFQ I + Sbjct: 300 HTLIGAGGGGGDGGMSAANLMKPALARGEIRVIGATTISEYRQYIEKDGALERRFQPILV 359 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EP+++E ++I+ + P+YE H VRYT A+ AAV LA +YINDR LPDKAID++DEAG Sbjct: 360 NEPTVDEAIEILTAVTPRYEEFHGVRYTPFAIDAAVRLAERYINDRFLPDKAIDLLDEAG 419 Query: 407 ARARLMPVSKRKK------TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 + +L + V ++ +VV+ I+ IP + + ++ L L + V Sbjct: 420 SMVKLADDGEEDDLPDDFFVVTDDNVATVVSEISGIPVGKLDRDEKAKLMRLEADIAKRV 479 Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELL 517 GQD A+ ++ AI+ AR+GL + KPV +FLF GPTGVGKTE+ L++ +++ Sbjct: 480 KGQDPAVNSVARAIRRARSGLRDQTKPVATFLFCGPTGVGKTELCKALAQTYYGREKDII 539 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 R DMSEYMER +VSRL+GAPPGYVG+D+GG LT+A+ + PH+V+L DE+EKAH DV N+L Sbjct: 540 RIDMSEYMERFSVSRLVGAPPGYVGYDEGGQLTEAIRRKPHSVVLFDELEKAHEDVLNVL 599 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL---------IHQDNSTDA 628 LQ++D G+LTD GR F+N + VMT+N G +E + S G Sbjct: 600 LQILDEGSLTDGKGRTVSFKNCIFVMTSNIGSQEILKLSRGENPTAEAGSSAGMTMEGAV 659 Query: 629 MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD-QKGVSLEVSQEAR 687 E++K PEF NR+D I+ F L DV+ + + E + ++ +++ +Q Sbjct: 660 KNELEKKMKPEFLNRIDEIVVFKPLEDDVLISIAMNILDETMKRAASEQDMAVTCTQSLM 719 Query: 688 NWLAEKG--YDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 +A +G GARPM R + L+ L+ ++ L +G +V V + E + Sbjct: 720 ATVANEGAFSAAQFGARPMRRAAKRFLEDTLSEAIMREFLSEGDEVIVDMANESEARGFT 779 Query: 746 FQS 748 S Sbjct: 780 GDS 782 >UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372BC Length = 750 Score = 642 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 250/746 (33%), Positives = 402/746 (53%), Gaps = 22/746 (2%) Query: 8 LSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELEAFIEQT 65 + A A A + H F+ EHLLL++ N +A + L + L+ + I + Sbjct: 12 KIIEGAVAIASQMGHTFVGSEHLLLSIAKEGNSAAADILIDNGLTYDDLQSAVVRMIGKG 71 Query: 66 TPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLR 125 TP +S T S +R+L+ A R + T N+L A+ ++ A L+ Sbjct: 72 TPSTLSSR-----YFTASVKRILENAASGGTIPKRRQATPENILSAVINDTSCTARKLIV 126 Query: 126 KHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGI 185 + + R D D + + + + ++ Sbjct: 127 SAGGDIRGICESLDVNFRLD------DDELYSSCAPKRSQFPHLFRYGRHITDSNVQAKR 180 Query: 186 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTI 245 DPLIGRE E+++ + L RR K+NP L+GE+GVGKTAI +G+A + GDVPE + + I Sbjct: 181 DPLIGREAEVQQVLMTLSRRTKSNPCLIGEAGVGKTAIVDGVAGLFISGDVPEALRNKYI 240 Query: 246 YSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAAN 305 ++LD+ +L++G KYRGDFE+R + +++ N ILFIDEIHTI+GAGAA G +DAAN Sbjct: 241 FALDLTALISGAKYRGDFEERLRGCIEEASSSGNIILFIDEIHTIVGAGAAEGA-IDAAN 299 Query: 306 LIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKY 365 ++KP L+ +++VIG+TT+ E+ EKD+AL RRFQ + + EPS+ E V++I G++ Y Sbjct: 300 IMKPQLARSELQVIGATTFDEYRKTIEKDKALERRFQPVTVNEPSVGECVEMIKGIRTAY 359 Query: 366 EAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK-KTVNVA 424 E +H+V + +A +V + ++INDR LPDKAID +DEA A A + + ++ Sbjct: 360 EKYHNVIISDEAAEFSVRTSARFINDRFLPDKAIDTLDEACAAAAIRNRENCRKYEISCG 419 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI V++ IPE S++ + L + G I + EA+ + +GL Sbjct: 420 DIAHVISLKTGIPESSITAFSDCRAAGIEKLLTRRITGHRDIIRKVAEAVYRSDSGLKDS 479 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYV 541 +P SFLFAGPTGVGKTE+ L++A +R DMSE+ME+ ++++LIGAPPGY Sbjct: 480 RRPAASFLFAGPTGVGKTELAKALAEAAFGSSGSFIRIDMSEFMEKSSITKLIGAPPGYA 539 Query: 542 GFDQG-GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 G+ +G L + V +HP++++L DEIEKA +V N+LLQ++D G +TD+ K FR+ Sbjct: 540 GYSEGRSNLCEQVRRHPYSLVLFDEIEKADTEVLNLLLQILDEGVITDSEMHKISFRSCF 599 Query: 601 LVMTTNAGVRETERKS---IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDV 657 ++MT+N G S G + + + I++ F+PEF NR+D I F L++ Sbjct: 600 IIMTSNIGADLVTGNSSMGFGSSAETVNERVTDRIRQYFSPEFINRIDEIAVFGKLNSCD 659 Query: 658 IHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 + + + +L+ + G+++E S++ + GARP+ R I D ++ LA Sbjct: 660 LLGITRNLLSDLKRRSQSIGITVEYSEKTVEIFSRTKDTDRYGARPIRRRITDMIENKLA 719 Query: 718 NELLFGSLVDGGQVTVALDKEKNELT 743 ++ + G V V + +T Sbjct: 720 QMIVNREVAKGDSVRVDTSNGEIMIT 745 >UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiales RepID=A8MFR5_ALKOO Length = 758 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 255/631 (40%), Positives = 391/631 (61%), Gaps = 58/631 (9%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ + TNL AR ID +IGR KE++R +Q+L RR KNNP+L+GE GVGKTAIAEGLA Sbjct: 129 LDTYGTNLTDRARNKEIDRVIGRNKEIDRVVQILNRRSKNNPILIGEPGVGKTAIAEGLA 188 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RIV+ VP + + +Y LD+ +++AGT++RG FE R KA++++ ++ N IL IDE+H Sbjct: 189 GRIVEKQVPAKLFNAEVYLLDLTAIVAGTQFRGQFEGRMKAIIEEAQECGNIILVIDEVH 248 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 I+GAG GG ++AAN++KP L+ G+I+VIG+TT E+ EKD AL RRFQ + + E Sbjct: 249 NIMGAGEVHGGVMNAANILKPALARGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVEE 308 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 PS+E+T++I+ G+K YE +H V+ + + + AA +++ +YI DR+LPDKAID+IDEAG+R Sbjct: 309 PSVEDTIEILKGIKGYYEDYHKVKISDEVIEAAAKMSERYITDRYLPDKAIDIIDEAGSR 368 Query: 409 A--------------------------------------------------RLMPVSKRK 418 + K Sbjct: 369 VNLRNEGLVEIEGLKVELKAIEEKKAEAAKKNDYEKAAQYKVDECRILDRIEELEAEVNK 428 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 + V D+ V+ IP +++ + L +L ++L V GQ A+ +L+ I+ R Sbjct: 429 SALTVEDVAFVIESWTNIPVGKITEEEASRLLSLEEQLHRRVVGQKDAVRSLSRTIRRNR 488 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIG 535 +G + KP SF+F GPTGVGKTE+ L++ L ++R DMSEYME+HTVS+LIG Sbjct: 489 SGFRKKRKP-ASFIFVGPTGVGKTELVRALAEELFGSEEAMIRVDMSEYMEKHTVSKLIG 547 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGYVG+DQGG LTD V + P++V+LLDEIEKAHPDVFN+LLQ++++G LTD+ GR Sbjct: 548 APPGYVGYDQGGQLTDKVRRKPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSQGRTVH 607 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNST---DAMEEIKKIFTPEFRNRLDNIIWFDH 652 F N V++MT+NAG + + S+G ++ A + +K+ F PEF NR+D I F Sbjct: 608 FENTVVIMTSNAGTQ-IKSGSMGFGNRGYEALENRAKDALKETFRPEFLNRVDETIVFTQ 666 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 LS + + ++++ + ++ + +KG+++ +S ++++ EKGYD GARP+ RVIQ ++ Sbjct: 667 LSKEELREIIELMLKDVIEDVKEKGMTITISDAVKDFILEKGYDEKYGARPLRRVIQRSI 726 Query: 713 KKPLANELLFGSLVDGGQVTVALDKEKNELT 743 + +A E + + V G + V L +++ L+ Sbjct: 727 EDEIAEEYIKNTFVPGDHIQVDLKEDRVVLS 757 >UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG60_9BACT Length = 802 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 265/818 (32%), Positives = 429/818 (52%), Gaps = 92/818 (11%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQEL 58 + + A + + EH+LL LL A E +D+ L ++ Sbjct: 4 LFTDRARRVILFAREASERLMQTSIDTEHILLGLLRERSGLAAEIFSRRGIDVSMLMNDV 63 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + E+ ++ + + + VL +V ++ V ++L+ + E++ Sbjct: 64 KGVSEKGHNLMIKGS----LPFSQNGKNVLDFSVEEAKNLKNKYVNTEHILLGLLKEKKG 119 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 +A+ LL K + + I T +++D P ++ F +L + Sbjct: 120 KASMLLSKLGFDLVTLREEIQ--TVSKSYAKNTDQAVTP----------TLDEFGRDLTK 167 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 LA G +DP+IGR E+ R IQ+L RR KNN +++GE GVGKTAI EGLA ++ DVP+ Sbjct: 168 LAMDGKLDPVIGRSTEITRLIQILGRRIKNNAVIIGEPGVGKTAIVEGLALKMASEDVPD 227 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + ++SL++G+++AGTKYRG FE+R K L+K++E D N I+FIDEIHTI+GAGAA Sbjct: 228 FLRNKRLFSLELGNVVAGTKYRGQFEERMKNLIKEIETDGNVIIFIDEIHTIVGAGAAE- 286 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA+N++KP L+ G + IG+TT EF FEKD AL RRFQ I + +P +ETVQI+ Sbjct: 287 GSIDASNMLKPALARGVFQCIGATTLSEFRKNFEKDGALNRRFQTISVDQPDADETVQIL 346 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 +G+K YE H V + L +YI ++ PDK+IDV+DEA +R +L + Sbjct: 347 DGIKRFYEDFHKVFIPHDVLEEITRLTDRYITEKFQPDKSIDVLDEACSRLKLATRTMPD 406 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTL-KNLGDRLKMLVFGQDK------------ 465 V + + + + ++ + K++ L Q + Sbjct: 407 DMVRIKNKLEQLKGLRDEKLRANDYDNIQKYSKDVERWATKLSVAQKEWEEELDLDWPTL 466 Query: 466 AIEALTE--------------------------------------------AIKMARAGL 481 IE ++E ++K + AGL Sbjct: 467 TIENISEVVAHMTGVPVQKLQTDDMARIANIDKDIKEFIIGQDEAVDALSRSVKRSFAGL 526 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPP 538 + +P+GSF+F GPTGVGKTEV +L++ + L+R DM+EYMER SRLIGAPP Sbjct: 527 SNPARPLGSFIFMGPTGVGKTEVAKKLAETVFGSESSLIRIDMTEYMERFNSSRLIGAPP 586 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+++GG LT+ V + P++V+L DEIEKAHP+V NILLQ++D+G + D+ G K +F+N Sbjct: 587 GYVGYEEGGKLTEQVRRKPYSVVLFDEIEKAHPEVLNILLQILDDGHINDSLGHKVNFKN 646 Query: 599 VVLVMTTNAGVRE-TERKSIGLIHQDN----------STDAMEEIKKIFTPEFRNRLDNI 647 +++MT+N G + RK++G ++ ST+A E+K F PEF NR+D++ Sbjct: 647 TIIIMTSNLGTKLSMNRKTLGFDTKEESNNEIDYDVFSTNAHRELKDRFPPEFINRVDSL 706 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 + F L + +++D ++E+ +L+ G L + Q+ + L Y+ + GARP+ R+ Sbjct: 707 VVFKPLGKAELIEIIDLQLIEINKRLEIAGKQLTIDQDVKEHLLSGEYEYSYGARPIKRL 766 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 +Q ++ PL+ LL G + V + +E+ + Sbjct: 767 LQSKIEDPLSEILLEGKFAKRKNLKVKMI--NDEIVFK 802 >UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GCV2_PHATR Length = 683 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 255/681 (37%), Positives = 393/681 (57%), Gaps = 29/681 (4%) Query: 83 SFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHE----VSRLDVVNFI 138 +R L +A G V +V +A+ E A L++ + V+ LDV + Sbjct: 5 DLKRTLVQAGKLADQMGSTTVGSQHVFLALLEYSEGGWAVLVKMNVLDDTVTALDVCESL 64 Query: 139 SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERA 198 D+P Q+ +G + +L Q A G +DP+ GR+ E Sbjct: 65 LQNM-ADQPDQARR--ELVTGAGGSGKMPTLTECGVDLTQQAEDGLLDPVYGRDDETRAC 121 Query: 199 IQVLCRRRKNNPLLVGES-GVGKTAIAEGLAWRIVQGDV-PEVMADCTIYSLDIGSLLAG 256 ++ L RRRKNN L+GE GVGKTAIAEG+A +V + P + ++SL++ +L+AG Sbjct: 122 VRTLIRRRKNNVCLIGEPVGVGKTAIAEGVAQILVDEKLCPARLKGHRLFSLELSNLVAG 181 Query: 257 TKYRGDFEKRFKALLKQLE--QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 TKYRG+FE+R ++++K++ + +ILFIDEIH ++GAGAA GG +DAANL+KP L+ G Sbjct: 182 TKYRGEFEERLQSIIKEVTDPKAPPTILFIDEIHNLVGAGAAEGG-MDAANLLKPALARG 240 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT 374 ++++IG+TT E+ EKD AL RR Q + + EPS+ +T+ I+ ++ YE HH V YT Sbjct: 241 ELQLIGATTIMEYRKYIEKDAALERRLQPVMVKEPSVVQTIDILQAVQSNYEKHHGVTYT 300 Query: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR-LMPVSKRKKTVNVADIESVVARI 433 + A+ AA L+ +Y+ DR LPDKA+D++DEAGA A P V + V++ Sbjct: 301 SAALNAAATLSDRYMTDRFLPDKALDLLDEAGAIAHLEEPDEDVTPEVTEHTVAMVISEW 360 Query: 434 ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLF 493 + IP + + D L+ L + V GQ +AI + A++ AR+GL +PV SFLF Sbjct: 361 SGIPMGKLETQEMDRLQALEGEMGRRVKGQGRAIRGVARAVRRARSGLRDPRRPVASFLF 420 Query: 494 AGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLT 550 GPTG GKTE+ L++ +++R DMSEYME+H+VSRL G PPGY+G+++GG LT Sbjct: 421 CGPTGTGKTELCKTLAETYYGSEKDMIRIDMSEYMEKHSVSRLTGPPPGYIGYEEGGQLT 480 Query: 551 DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR 610 +AV + PH+V+LLDE+EKAH DV NILLQVM++G LTD GR +F+N +LVMT+N G R Sbjct: 481 EAVRRAPHSVVLLDELEKAHGDVLNILLQVMEDGMLTDGKGRTINFKNSILVMTSNVGSR 540 Query: 611 ETER----------KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 + ++ + + EE+++ PE NR+D II F LST + Sbjct: 541 RILEVARSGRDSIVQKDHYLYAELAQVVKEELEREMKPELLNRIDEIIVFSPLSTGDLWM 600 Query: 661 VVDKFIVELQVQ-LDQKGVSLEVSQEARNWLAEKGY--DRAMGARPMARVIQDNLKKPLA 717 + + + ++ + L ++ + L++ + + +G GARPM R Q ++ L+ Sbjct: 601 IAELIVAKISERALKEQKLELKIDRSVIERVMAEGSANADQFGARPMRRAAQRFVEDSLS 660 Query: 718 NELLFGSLVDGGQVTVALDKE 738 + ++ G L +G TV+L + Sbjct: 661 DAIIQGFLQEGEGATVSLASK 681 >UniRef50_C8PIY8 ATP-dependent CLP protease ATP-binding subunit n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PIY8_9PROT Length = 793 Score = 634 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 304/792 (38%), Positives = 476/792 (60%), Gaps = 59/792 (7%) Query: 6 LELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSVDLVALRQELEAFIEQ 64 L A + A + E++T H++ A+ N + D+ L + + Sbjct: 6 LNKHFEQAISVANDGEDEYITTSHVVYAIFKYNKPFHGLIAKEIPDINYL--NILDNLGG 63 Query: 65 TTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLL 124 ++P S + Q T+ F++ + + + + ++ I +++E+ +L Sbjct: 64 LLDMMPKSSGKAPAQ-TIEFKQ-FYTELNNAKEPKNEL----DFMLKILNDKENDCTKIL 117 Query: 125 RKHEVS-----------------RLDV---------------VNFISHGTRKDEPT---Q 149 + ++ R +V ++ I+H DE Q Sbjct: 118 NHYGINAAIFELIVRKYKSAFDHRDEVVSRDEAAAIKLNSYDIDDITHAMNYDESRKQWQ 177 Query: 150 SSDPGSQPNSEEQAGGEERMEN------FTTNLNQLARVGGIDPLIGREKELERAIQVLC 203 +++ E+ A E ++ +T NLN++A G IDPLIGREKE+E+ +Q LC Sbjct: 178 NTEFEPAFEGEKDAINERDIKKDSPSSLYTANLNKIALEGKIDPLIGREKEIEKTLQTLC 237 Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 RR+KNNP+LVGE+GVGKTAI EG+A +IV+G+VPE + + IY+LD G+L+AGT RG+F Sbjct: 238 RRKKNNPILVGEAGVGKTAIIEGIALKIVRGEVPEKLKNKVIYALDAGALIAGTTLRGEF 297 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTT 323 E+R K L+ + + N+ILFIDEIHTI+GAG + ++D +N++KP L+SG++ VIG+TT Sbjct: 298 EERLKDLIDEFSANQNAILFIDEIHTIVGAGTGNRNELDMSNILKPSLASGELSVIGATT 357 Query: 324 YQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVE 383 Y E+ + F +D+AL+RRF KID++EPSI+++V+I+ G+ KYE H V+++ + +R +V Sbjct: 358 YGEYRS-FSQDKALSRRFCKIDVSEPSIDDSVEILKGVAKKYEEFHGVKFSDEILRDSVT 416 Query: 384 LAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQ 443 LA KY +D+ LPD AID+IDE GA P ++ D+ + ++ A I S S Sbjct: 417 LAKKYQSDKFLPDSAIDLIDEVGASFAFKPHEAPL-EISKDDLVNTLSISANIANLSSSV 475 Query: 444 SDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTE 503 ++ LKNL +K +FGQD+A+ +L +A+ + AGLG P+G FLFAG +GVGK+E Sbjct: 476 DNKQVLKNLEANIKREIFGQDEAVSSLCKALLRSYAGLGGASSPIGVFLFAGSSGVGKSE 535 Query: 504 VTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLL 563 + L+ LG+ R+DMSEYME H+VSRLIGAPPGYVGF+ GG+LT+ + KHP++V+L Sbjct: 536 LAKVLAAQLGVHFERYDMSEYMEAHSVSRLIGAPPGYVGFENGGILTNNIKKHPYSVILF 595 Query: 564 DEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQD 623 DE+EKAHP + NI L + DN +LTDNNG DF+N +++M++N G +E + +G +D Sbjct: 596 DEVEKAHPSMTNIFLGIFDNASLTDNNGVTTDFKNTIIIMSSNLGTKEAPQ--VGF-TKD 652 Query: 624 NSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS 683 S IK F PEFRNR+D II F+ LS +++ ++VDK I EL+ QL K V + ++ Sbjct: 653 ESYKVDSAIKSFFAPEFRNRIDKIINFNRLSGEILEKIVDKTIGELESQL--KNVKISLN 710 Query: 684 QEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 +EA++ + +GY GAR + R I + ++ ELLFG+L +GG V+V++ + EL+ Sbjct: 711 KEAKDLIISRGYSDEFGARNLKREISSQISDHISGELLFGALQEGGLVSVSV--KDGELS 768 Query: 744 YGFQSAQKHKAE 755 + F S + E Sbjct: 769 FSFASTPLPQIE 780 >UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=Clostridiales RepID=C7H8Y8_9FIRM Length = 767 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 246/660 (37%), Positives = 372/660 (56%), Gaps = 65/660 (9%) Query: 147 PTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRR 206 + ++++ + ++ + NL + AR G +D +IGR++E+ R IQ+L RR+ Sbjct: 112 AQNGKNEKKAGKNDKKPPRRKFLDTYCENLTRKAREGKLDDIIGRDREIYRTIQILSRRQ 171 Query: 207 KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKR 266 KNNP L+GE+GVGKTAIAEG+A RI +G VP + D I+ LD+ SL+AGT++RG FE+R Sbjct: 172 KNNPCLIGEAGVGKTAIAEGIAERIAKGQVPAGLQDKEIFLLDLTSLVAGTQFRGQFEQR 231 Query: 267 FKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 K LL +++ N ILFIDEIHTI AG + G ++A N++KP LS G+I+VIG+TT+ E Sbjct: 232 VKGLLSEVKAAGNVILFIDEIHTITSAGESEGA-MNAGNILKPALSRGEIQVIGATTFNE 290 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + EKD+AL RRFQ + + EPS+ +T+ ++ G+K YE HH V+ A + A V L+ Sbjct: 291 YRKYIEKDQALERRFQPVRVEEPSVADTLAVMGGIKHYYEEHHHVQVPADVLNATVTLSE 350 Query: 387 KYINDRHLPDKAIDVIDEAGA------------------------RARLMPVSKRKKTVN 422 +YI DR+LPDKAID++DEA A M + + ++ Sbjct: 351 RYITDRYLPDKAIDLLDEACACCNLAHPVISEYLTMQKELEALKQEEADMENADVNEPID 410 Query: 423 VADIESVVARI-------------------------------ARIPEKSVSQSDRDTLKN 451 + R+ IP + +++ L + Sbjct: 411 YERVAERKTRMAQLERELPAKQAAAGEIQVTMDDVAKVIELWTGIPAVKIRETEYAKLAS 470 Query: 452 LGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA 511 L LK + GQD A+ + +A+K +RA L +P SF+F GPTGVGKTE+ QL+ Sbjct: 471 LETELKKKIIGQDDAVHLVAQAVKRSRADLSGRRRP-ASFIFVGPTGVGKTELVKQLANQ 529 Query: 512 LG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEK 568 L L+R DMSEYME++ VSR+IG+PPGYVG+++ G LT+ V + P++V+L DEIEK Sbjct: 530 LFDGPDPLIRLDMSEYMEKYAVSRMIGSPPGYVGYEEAGQLTEKVRRRPYSVVLFDEIEK 589 Query: 569 AHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL---IHQDNS 625 AHPDV NILLQ++D G + D GR DF N V+ MT+NAG + S+G + N Sbjct: 590 AHPDVMNILLQILDEGKINDAQGRTVDFSNTVICMTSNAGSSDQTTASLGFNRSEEERNE 649 Query: 626 TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQE 685 + + + + PEF R+D +I F LS + + + + E + ++ KG++ + Sbjct: 650 EKSRKALSQFLRPEFLGRVDEVITFKPLSEETLQGIAALMLDEYKPSMEAKGIAYSYTPA 709 Query: 686 ARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 A L K GAR + R I+ ++ P A +++ G+LV G +TV D E +E+ Sbjct: 710 ALAALVHKSQGGKFGARDLRRTIRKAVEDPAAEKIIDGTLVSGSTLTV--DAENDEIVLK 767 >UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37703 Length = 792 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 252/668 (37%), Positives = 378/668 (56%), Gaps = 62/668 (9%) Query: 146 EPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRR 205 P+ SD + E+ + + ++ TNL+Q A G +D +IGR+KE+ R IQ+L RR Sbjct: 130 SPSGKSDKKGSSSRREKKKELKFLGSYCTNLSQKAADGQLDNIIGRDKEIARVIQILSRR 189 Query: 206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK 265 KNNP L+GE GVGKTAIAEG+A RI GDVP +AD +Y LD+ +L+AGT++RG FE Sbjct: 190 TKNNPCLIGEPGVGKTAIAEGIAQRINSGDVPFNLADKKLYLLDLTALVAGTQFRGQFES 249 Query: 266 RFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQ 325 R K L+ +++++ N ILFIDE+H ++GAG + G ++AAN++KP LS G+++VIG+TT+ Sbjct: 250 RVKGLVDEVKREGNIILFIDEVHNLVGAGDSE-GSMNAANILKPALSRGEVQVIGATTFG 308 Query: 326 EFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 385 E+ EKD AL RRFQ + + EP+IE+TV ++ G+K YE +H + + VR L+ Sbjct: 309 EYRKYIEKDSALERRFQPVTVNEPNIEDTVSVLLGIKKYYEEYHHLHISDYLVRVCAVLS 368 Query: 386 VKYINDRHLPDKAIDVIDEAGA-------------------------------------- 407 +YI DR LPDKAID++DEA A Sbjct: 369 ERYITDRFLPDKAIDLMDEACAYTCIRSPEIAEYEKIKKEISVLEGMEKSISEQDEIDYQ 428 Query: 408 ----------RARLMPVSKRKKTVNVA----DIESVVARIARIPEKSVSQSDRDTLKNLG 453 AR R K +V DI VV IP +++++ + L Sbjct: 429 ALAEVKGKLIHAREDEAKLRDKAESVEVTEGDIAKVVELWTGIPASKIAENEFLKIAKLE 488 Query: 454 DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 LK V GQD+A+E LT+AIK R L +P SF+F GPTGVGKTE+ L++ + Sbjct: 489 GALKSRVLGQDEAVEVLTKAIKRTRVQLSKRRRP-ASFIFVGPTGVGKTELVKALAEEMF 547 Query: 514 I---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH 570 L+R DM+EYME+H+V+R+IG+PPGYVG+D+ G LT+ V + P++V+L DEIEKAH Sbjct: 548 DSPEPLIRLDMTEYMEKHSVARMIGSPPGYVGYDEAGQLTEKVRRRPYSVILFDEIEKAH 607 Query: 571 PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN--STDA 628 PDV NIL+Q++D G + D +GR +F N ++ MT+NAG + D A Sbjct: 608 PDVMNILMQILDEGKVDDAHGRTVNFENTIICMTSNAGSTDKSVGVGFNRTADEVSKDKA 667 Query: 629 MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARN 688 M+ +++ PEF +R+D I+ F L+ + + + E++ L +K + L + EA Sbjct: 668 MKGLREFLRPEFISRIDEIVVFRQLTKENFADIAALMLDEMKEPLAEKNIGLTYTPEALK 727 Query: 689 WLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 +AEK + + GAR + RVI+ ++ +A ++ T+A+ +L Sbjct: 728 LIAEKSFGKPYGARDIRRVIRQEVEDKVAEIIIEN---ASDTETIAVSANGEQLVVEGVK 784 Query: 749 AQKHKAEA 756 + EA Sbjct: 785 KENKTYEA 792 >UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR Length = 643 Score = 625 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 252/625 (40%), Positives = 380/625 (60%), Gaps = 46/625 (7%) Query: 160 EEQAGGEERMENFTTNLNQLARV----------------------------------GGI 185 E+Q + + + T+L ++A+ G + Sbjct: 5 EKQHFKADMLNKYGTDLTKMAQEVKPDFSFSHVLAEPVTSELATITLTLASLNGILQGKL 64 Query: 186 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTI 245 D ++GR K++ER Q+LC+RRKNNP LVG+ GVGKT I EGLA IV+G VP + I Sbjct: 65 DQVVGRRKQIERVTQILCKRRKNNPCLVGDPGVGKTVIVEGLAANIVKGTVPSKLEGKKI 124 Query: 246 YSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQVDAA 304 ++LD+ L+AGTK+ GDFE+R ++ +++Q D N +LFIDE+HT++G G +DA Sbjct: 125 FALDMARLVAGTKFHGDFEERLTGIVDEVKQSDGNIVLFIDELHTLVGNGQT----LDAT 180 Query: 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPK 364 N++KP L+ G+++ IG+TT E+ EKD AL RRF +D+ EPS++E V+I+ G++ K Sbjct: 181 NILKPALARGELKCIGATTIDEYRRYIEKDGALKRRFLHVDVPEPSVDEAVEILKGIQGK 240 Query: 365 YEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA--RLMPVSKRKKTVN 422 YEAHHDV+Y +A+ AAV L+ +YI+ LPDKAID+IDEAGAR R + K V Sbjct: 241 YEAHHDVKYADEALVAAVRLSNQYISGLFLPDKAIDLIDEAGARVQLRQARSASEKLLVT 300 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 DI++VV+ + IP V+ + L N+ L + GQ++A++A++ AI+ AR G Sbjct: 301 EEDIQAVVSMVTGIPLDKVTDKESRRLLNMEAELHKYIVGQEEAVKAVSHAIRRARVGTK 360 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLS-KALGIE--LLRFDMSEYMERHTVSRLIGAPPG 539 +KP+ SFLF GPTGVGKTE+ L+ + G + ++R DMSEYME+HTVS+L G+PPG Sbjct: 361 DPNKPIASFLFTGPTGVGKTELAKALAVEYFGSKEAVVRIDMSEYMEKHTVSKLFGSPPG 420 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 Y+G+D GG T+AV H V+L DEIEKAH DV + LQ++D+GTLTD GRK DF+N Sbjct: 421 YIGYDDGGQFTEAVRCRAHTVVLFDEIEKAHQDVNRVFLQILDDGTLTDGKGRKVDFKNT 480 Query: 600 VLVMTTNAGVRET--ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDV 657 +++MT+N G E + + EE+KK F+PEF NR+D +I F L+ Sbjct: 481 IIIMTSNIGNSLIAQEDEEDEIRFNTVKLIVAEELKKEFSPEFLNRIDEVIVFRKLNNAQ 540 Query: 658 IHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 ++++ D + E+ +L K + + V+ + + E+G + + GARP+ R I L+ +A Sbjct: 541 LNEIADLMLAEVYGRLKAKNIIIRVTDGLKRKIIEEGNNLSYGARPLKRAIVRLLEDNIA 600 Query: 718 NELLFGSLVDGGQVTVALDKEKNEL 742 +L G + +G V V ++ N + Sbjct: 601 KGILNGFVEEGRSVIVDVNSNGNVI 625 >UniRef50_A5UYN2 ATPase AAA-2 domain protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UYN2_ROSS1 Length = 786 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 258/774 (33%), Positives = 404/774 (52%), Gaps = 46/774 (5%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEAC-SVDLVALRQELEA 60 + + L L +A A A+ + EH+ LALL + E + V L A E++ Sbjct: 4 SPGVSLILVLAVAEAQLTESSHLEPEHIFLALLKSEDISTETVPGMPQVSLAAATGEIQR 63 Query: 61 FIEQTTPV-----------------LPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEV 103 + S E + + + +A + R+ V Sbjct: 64 IAAFWQQEGISAKRLRRRLRAIVREMSKSRGEFSGHRSQRGRELFNKAETLAWQNQRDNV 123 Query: 104 TGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQA 163 T ++LV + L ++ + R ++ TQ ++ Sbjct: 124 TPFDLLVCSLEIESKAIDMLFQEMNLERQKLLERARELLAWTPETQ----------RKEI 173 Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 E R+ + +L LAR G + P+IGR +E+++ ++L +R KNNPLL+G+ GVGKTAI Sbjct: 174 SQEHRLAKYGRDLTALARAGRLGPVIGRAEEIKQIARILVQRSKNNPLLLGDPGVGKTAI 233 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILF 283 AEGLA + + D + + +LL+G YRG FE+R + +++ QD N +LF Sbjct: 234 AEGLASYAASENAVTPLRDFYFVEISVAALLSGAMYRGQFEERVQEVIETARQDKNLVLF 293 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 +DEIHT++G+GA +DAAN++KP L+ G IR IG+TT E+ E D ALARRFQ Sbjct: 294 LDEIHTLMGSGAGGSSTLDAANMLKPALARGDIRCIGATTIDEYRKHIEPDGALARRFQI 353 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + I EPS ET+ I+ GL+ K + HH + +A++ AV L+ +YI D + PDKAI V+D Sbjct: 354 VWIDEPSPTETLHILRGLRSKMQEHHQIEIPDEALQKAVSLSGRYITDGYQPDKAITVLD 413 Query: 404 EAGARARLMPVSKRKKTVN-----VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 EA AR RL+ + + V DI VVAR +IP + + QSD + L +L + L Sbjct: 414 EACARRRLLTIHVQSSPTQTSHLEVEDIGQVVARRTQIPLEVILQSDEERLLHLEEELGK 473 Query: 459 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IE 515 V GQD+A+ + EA++++R GL KP+ +FAGPTG GKTE+ LS+ L Sbjct: 474 RVLGQDEAVRTVAEAVRISRVGLRAPGKPI-VLMFAGPTGTGKTELAKALSETLFFDPNR 532 Query: 516 LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFN 575 L+ DMSEY E H+V++LIG+PPGY+GF + L + HP++V+LLDEIEKAHP V Sbjct: 533 LITLDMSEYQESHSVAKLIGSPPGYIGFGEEPYLVRELRLHPYSVVLLDEIEKAHPSVLT 592 Query: 576 ILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN--------STD 627 + LQV D G LTD GR+ + + ++T+N G ++ IG + + Sbjct: 593 VFLQVFDEGRLTDARGRRINCGEAIFILTSNLGASIEVKRPIGFQGMEAEQHIAALVEAN 652 Query: 628 AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEAR 687 + I +PE NRL ++ F L + ++D ++ L QL ++ +S+ + A+ Sbjct: 653 VKQIIAARLSPELVNRLQAVVVFRSLDEKTLDAILDLYVQGLNRQLAERQISIAMDASAK 712 Query: 688 NWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNE 741 +L E+GY GAR + R + + +PL+ E+L G L G Q+ ++ + + Sbjct: 713 AFLIEQGYSAEFGARHLKRAFERLIAEPLSREILSGKLKAGQQIIFFMEAGQLQ 766 >UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Bacteria RepID=C2MCW4_9PORP Length = 1011 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 255/694 (36%), Positives = 391/694 (56%), Gaps = 88/694 (12%) Query: 132 LDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAG----------------GEERMENFTTN 175 ++ I R ++ + + GS P G ++ F TN Sbjct: 280 EEIQEHIKAIIRHEQSKVTQNSGSNPFDLSAEGESGKEEKASKKSSKRSKTPALDAFATN 339 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 LNQLA+ G +DP+IGR KELER +LCRR+KNNP+L+GE+GVGKTA+AEGLA + + + Sbjct: 340 LNQLAKDGKLDPMIGRAKELERITHILCRRQKNNPVLIGEAGVGKTAVAEGLAQLLARDE 399 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 V + +YS+D+ +LAGT+YRGDFE+RFKALLK+ E N+IL DEIHT++GAG+ Sbjct: 400 VSYKLRGKVLYSVDLAQMLAGTRYRGDFEERFKALLKEAEMLGNTILLFDEIHTLMGAGS 459 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 G +DA+N++KP L+ G I+VIG+TT E+ EK+ ALARRFQK+ I + EET+ Sbjct: 460 TE-GSMDASNMLKPALARGTIQVIGATTLDEYRRTIEKNGALARRFQKVMIEPNTPEETL 518 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYI-------------------------- 389 +I+ L+ +YE H V Y+ +A+ A V L +YI Sbjct: 519 EILRQLRGRYEEFHHVHYSDEALIAMVRLTNRYIYDRYFPDKAIDVLDEVGASMHLKGKL 578 Query: 390 --------------NDRHLPDKAIDV-------------------IDEAGARARLMPVSK 416 R DKA+ +DE +A Sbjct: 579 GESDKVASLRQQLRTYRASRDKAVRESNYDTAMTLKVQEELVQKEVDEELEKAHAEEAGT 638 Query: 417 RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM 476 V+ + V+ ++ +P ++SQ + L+ + LK +V GQD AI + +AI+ Sbjct: 639 -YLPVDEEAVAKTVSMMSGVPISNISQEEHAKLRQMRQTLKDIVIGQDDAINKVVKAIQR 697 Query: 477 ARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRL 533 R GLG + +P+GSFLF GPTGVGKT + +L++ L + L+R DMSEYME VSRL Sbjct: 698 NRLGLGSDKRPIGSFLFLGPTGVGKTYLAKKLAELLFDDEDALIRIDMSEYMESFNVSRL 757 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 +GA PGYVG+D+GG LT+ V + P++V+L DE+EKAHPDV+NILLQ++D+G +T +G Sbjct: 758 VGAAPGYVGYDEGGQLTEQVRRKPYSVVLFDELEKAHPDVYNILLQILDDGFITAADGTH 817 Query: 594 ADFRNVVLVMTTNAGVRETE--------RKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLD 645 F+N V+++T+N G R+ + R+ + L + +++KK F+PEF NRLD Sbjct: 818 VSFKNTVIILTSNIGTRQLKDFGAGVGFRQEVQLSQTEQEALLSKQLKKHFSPEFLNRLD 877 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 + I+F L + I ++VD + + ++ ++G +L V+ A++ LA+ G+D GARP+ Sbjct: 878 DTIYFASLEKEDIRKIVDVELRPIMARITEQGYNLVVTPSAKDKLADVGFDLEYGARPLR 937 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 R ++ ++ L + +L G G V + + + + Sbjct: 938 RALRHWIEDKLTDLILDGEANVGDTVRLRVSEGE 971 >UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XL03_ORYSJ Length = 877 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 258/811 (31%), Positives = 416/811 (51%), Gaps = 101/811 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + ++ + AR E + HLLL L++ + A V + R+ A Sbjct: 74 FTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDRSPLGFLASGVRVERAREACRAA 133 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + + D + + +RV + AV ++ G N ++ ++ + +F+ + Sbjct: 134 VGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNLNDPTTN 193 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE------------------EQA 163 +L+ V + + + +P + + + Sbjct: 194 NVLKSLGVDSSQLAKQALTRVQGELAKDGREPVGLSSFKVREKFTPGGGKSAIVKYSNKN 253 Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 + + F +L A G IDP+IGR+ E+ER +Q++CRR KNNP+L+GE+GVGKTAI Sbjct: 254 KEKSALALFCLDLTMRASGGLIDPVIGRKDEIERVVQIICRRTKNNPILLGEAGVGKTAI 313 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD------ 277 AEGLA +I GDVP + I SLD+ L+AG K RG+ E R +L++++ + Sbjct: 314 AEGLAHKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKADPKLPF 373 Query: 278 -------------TNSILFIDEIHTIIGAG----AASGGQVDAANLIKPLLSSGKIRVIG 320 + ILFIDE+HT+IG+G + G +D ANL+KP L+ G+++ I Sbjct: 374 LVFNLQRAPKFHAGDVILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIA 433 Query: 321 STTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRA 380 STT E F+KD+ALARRFQ + + EPS E+ V+I+ GL+ KYE +H +YT +++ A Sbjct: 434 STTLDEHRLHFDKDKALARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLESINA 493 Query: 381 AVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKS 440 AV L+ +YI DRHLPDKAID+IDEAG+RAR+ ++K E + +++ P++ Sbjct: 494 AVYLSARYIADRHLPDKAIDLIDEAGSRARMESFKRKK--------EEQCSILSKSPDEY 545 Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 + ++N+ + ALT +K + E + G Sbjct: 546 W--QEIRAVQNMHEV-------------ALTNKVKYSLNQNDQEDAVDIELV-----GED 585 Query: 501 KTEVTVQLSKALGIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPH 558 KT LS + + +R DMSEYMERH VS+LIG+PPGY+GF +GG LT+AV + P Sbjct: 586 KTSPASMLSTSTDKKSATVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPF 645 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETE--RKS 616 V+LLDEIEKAHPD+FNILLQ+ ++G LTD+ GR+ F+N ++VMT+N G ++S Sbjct: 646 TVVLLDEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISNGKRS 705 Query: 617 IGLIHQDNSTD---------AMEEIKKIFTPEFRNRLDNIIWFDHLST------------ 655 IG Q ++ + MEE+K F PE NR+D ++ F L Sbjct: 706 IGFQTQTDTEEKSYAAMKSLVMEELKAFFRPELLNRIDEVVVFHPLEKTQACCFYRYCTC 765 Query: 656 -------DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 + + +++ + E++ ++ G+ LEVS ++ +++ GYD++ GARP+ R + Sbjct: 766 ILPCTFVNTMLAILNIMLQEVKGRILALGIGLEVSDSMKDLISQHGYDKSYGARPLRRAV 825 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 ++ ++ +L G G + V D Sbjct: 826 TQLVEDVISEAILSGQFKPGDTIMVDTDATG 856 >UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit clpL n=194 Tax=cellular organisms RepID=CLPL_STAAR Length = 701 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 262/688 (38%), Positives = 390/688 (56%), Gaps = 68/688 (9%) Query: 114 SEQESQAAYLLRKHEVSRLDVVNFISHGT--RKDEPTQSSDPGSQPNSEEQAGGEERMEN 171 S Q S Y + EVS ++ F G ++ Q+ + +Q+G +E Sbjct: 24 SNQTSNKKYYINGKEVSPEELAQFTQQGGNHSAEQSAQAFQQAALRQQGQQSGNGNYLEQ 83 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 NL Q AR G +DP+IGR+KE++ +VL RR KNNP+LVGE+GVGKTAI EGLA I Sbjct: 84 IGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAI 143 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 V+G+VP + D I S+DI SL AGT+YRG FE+ + L++ ++ N++LF DEIH II Sbjct: 144 VEGNVPAAIKDKEIISIDISSLEAGTQYRGAFEENIQKLVEGVKSSQNAVLFFDEIHQII 203 Query: 292 GAG--AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 G+G + G ++++KP LS G+I +IG+TT E+ N KD AL RRF ++ + EP Sbjct: 204 GSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNIMKDAALTRRFNEVLVNEP 263 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 S ++TV+I+ G++ K+E HH V+ ++A V+L+++YI R LPDKAIDV+D A Sbjct: 264 SAKDTVEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHL 323 Query: 410 R------------------------------------------------LMPVSKRKKTV 421 + Sbjct: 324 SAQSPAIDKVTTEKRISELEHDKRKAVSAEEYKKADDIQKEIKSLQDKLENSNGEHTAVA 383 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 V DI + R+ IP + +D + LKN+ RL+ + GQDKA+E ++ AI+ RAG Sbjct: 384 TVHDISDTIQRLTGIPVSQMDANDIERLKNISSRLRSKIIGQDKAVEMVSRAIRRNRAGF 443 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPP 538 ++P+GSFLF GPTGVGKTE+ QL+ L L+R DMSEY + VS++IG Sbjct: 444 DDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMSEYSDTTAVSKMIGTTA 503 Query: 539 GYVGFDQ-GGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 GYVG+D LT+ V ++P++V+L DEIEKA+P + +LLQVMD+G LTD G +F+ Sbjct: 504 GYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFK 563 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDV 657 N +++ T+NAG G + D M E+KK F PEF NR + I+ F HL D Sbjct: 564 NTIIICTSNAG--------FGNGNDTEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDA 615 Query: 658 IHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 + +V+ + ++QV LD+KG++++VSQ+A++WL E+GYD +GARP+ R+++ ++ + Sbjct: 616 LQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKIT 675 Query: 718 NELLFGSLVDGGQVTVALDKEKNELTYG 745 + L + V +D E NEL Sbjct: 676 DYYLDHT----DVKHVDIDVEDNELVVK 699 >UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KIW5_TOXGO Length = 983 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 273/855 (31%), Positives = 409/855 (47%), Gaps = 124/855 (14%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS---NPSAREALEACSVDLVALRQEL 58 L+ A +H ++ HL+ LL + + ALE LR+++ Sbjct: 100 FTDAASDLLDCVEQLAWMLQHPELSRVHLVACLLDMPGDTTVPTALEKAGGKSADLRKDM 159 Query: 59 EAF-IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQE 117 I V P S E ++ +RV+ A QS G V +++ A+ Sbjct: 160 HNLLIRMPQSVTPLSYGEARSRS--ELKRVIIDAYNEAQSRGHRLVGVHDLVTALARCDR 217 Query: 118 SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 +A L + ++ + + + G +E ++ F ++ Sbjct: 218 FRAR--LANVGTDVSVFLKLVTSAFIVHTEAEERKA-----TPARTGSQEWIKTFGVDMT 270 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 + A+ G I + GRE E+E+ V+ R K N LL+GE GVGKTA+ EGLA RIV GDVP Sbjct: 271 EQAKEGKIGTVTGREAEIEQITSVMSRMSKANCLLIGEPGVGKTAVVEGLAKRIVDGDVP 330 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAA 296 + + ++SLD+GSLL+G+ RG+FE+R K +L L D ++ILFIDEIHT++GAG A Sbjct: 331 DALLGVQVFSLDVGSLLSGSSMRGEFERRMKGILDYLFASDRSTILFIDEIHTLMGAGKA 390 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 G +DAANL+KP L+ G +RVIG+TT E+ E+D A ARRF I++ EP + +T+ Sbjct: 391 D-GPMDAANLLKPALARGALRVIGATTRAEYRKHIERDMAFARRFVTIEMKEPDVAKTIT 449 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA--------- 407 ++ G++ E HH + T A+ AA L+ +YI R LPDKAID+ID+A A Sbjct: 450 MLKGIRKNLENHHKLTITDGALVAAATLSDRYIKSRQLPDKAIDLIDDACAIKKVKSLRR 509 Query: 408 --------------------------------------RARLMPVSKRKKTVNVADIESV 429 A + ++ + AD+ V Sbjct: 510 LMNERAANEEKNDNGGSGDASSSANGDGEKKRDDLEKLEAEIAKEAEDADALTDADVADV 569 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 V+ IP ++++DR L +L L+ V GQ++A+EA+ AI +RAGL + P+G Sbjct: 570 VSLRTGIPVNKLTETDRQRLLSLPASLQAQVIGQEEAVEAVANAIIRSRAGLARRNAPIG 629 Query: 490 SFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 +FLF G TGVGKTE+ L+ A+ L+R DMSEY E HTV+RL+G+PPGYV D+G Sbjct: 630 TFLFLGSTGVGKTELAKALTAAIFHDEKNLIRLDMSEYSEPHTVARLVGSPPGYVSHDEG 689 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G LT+AV + PH+V+L DEIE AHP+VF LLQ++D G LTD G DF N V++ T+N Sbjct: 690 GQLTEAVRQRPHSVVLFDEIENAHPNVFAYLLQLLDEGRLTDMRGITVDFTNCVIIATSN 749 Query: 607 AGVRETERKS----------IGLIHQDNSTDAMEEI-----------------KKIFTPE 639 G + S + + H D+ +E I K +P Sbjct: 750 IGAKHILAASEKAGDEASGKVTIGHFDSERQQLEHIADANAGAQVAEEVNGDKKDSTSPA 809 Query: 640 FRNRLDNIIWFDH---------------LSTDVIHQVVDKFIVELQV-------QLDQKG 677 L + V++++ L +L QKG Sbjct: 810 QEKALARKKVANWKTQARAAVLAEAARVFKPQVLNRMTVIIFDPLTPQDLKRIFRLQQKG 869 Query: 678 ---------VSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 + L V ++A ++ E+ Y R GAR + R N+ LA +L G L G Sbjct: 870 LADLLSEQRIDLVVEEDAVTFVVERAYSRHFGARRLKRFFDKNITGRLAPWILSGWLRSG 929 Query: 729 GQVTVALDK-EKNEL 742 + + + K KN L Sbjct: 930 MMLRIIVSKTRKNSL 944 >UniRef50_D1Z247 ATP-dependent Clp protease ATP-binding subunit ClpA homolog n=1 Tax=Methanocella paludicola SANAE RepID=D1Z247_METPS Length = 782 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 252/778 (32%), Positives = 406/778 (52%), Gaps = 41/778 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSV--DLVALRQELE 59 L S ++A A R + EHL + ++S A + + + ++ A+R LE Sbjct: 6 LTAGASRSWDIAAEEASRSRSRVIEKEHLFIGIMSLDKAVDTADPGPIKAEMDAIRNVLE 65 Query: 60 AFIEQTTP-------------VLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGA 106 ++ +P S+E R + + + +RA S RNE++ Sbjct: 66 GACDRPSPAAVIRRGVRKALGSADKSQEPRVFHRSEECKALFRRAGGL--SYARNEISSL 123 Query: 107 NVLVAIFSEQESQAAYLLRKHEVSRLDVVN----FISHGTRKDEPTQSS----DPGSQPN 158 ++L AI L + D++ +I+ D+ Q S + S N Sbjct: 124 HLLAAILECPGPAIEAALSGAGIDFRDMMEPAYAWIAILEGGDKQFQRSMEKKEISSAVN 183 Query: 159 SEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV 218 +E +L + A G + P R+KEL + IQVL RR KNNP+L+GE+GV Sbjct: 184 DWLGLKHGGYLEKHGRDLTREAMAGRLGPFSERKKELLQLIQVLGRRAKNNPVLIGEAGV 243 Query: 219 GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT 278 GKTA+ E LA RI +G V+ I L + SL+A TKYRGD E+R +L + D Sbjct: 244 GKTAVVEALAMRIARGKDAHVLGGKRIIQLSMASLVANTKYRGDLEERLTGVLDEAVADP 303 Query: 279 NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALA 338 +LFIDEIHT++GAG + G +DA+N++KP L G +R IG++T E+ E D AL Sbjct: 304 GIVLFIDEIHTVVGAGRSDGSALDASNILKPYLVRG-LRCIGTSTIAEYHRHIEADPALE 362 Query: 339 RRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKA 398 RRF+ I + EP EE + ++ L+PK E HH VR +A+ A+V+L++++ + LPDKA Sbjct: 363 RRFETILVEEPCREEALAMLGTLRPKLEEHHGVRILDEALEASVDLSMRFDAEHMLPDKA 422 Query: 399 IDVIDEAGARAR-----LMPVSKRKKTVNVADIESVVARIARIPEKS----VSQSDRDTL 449 +D++D A + AR + + + ++ V+ I +A A +P + + L Sbjct: 423 VDLLDMACSGARIPVLSMGSMDEPRRQVDARSIAETLAGSAGMPLELAASHLEGPTTSRL 482 Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 L L+ + GQ++AI +++ + +A +G+ P+ FLF GPTGVGKTE L+ Sbjct: 483 LGLEGFLRGRLAGQEEAIAKVSKRLMVAYSGIEKRQGPLAVFLFTGPTGVGKTETARLLA 542 Query: 510 KALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI 566 + L E++R D+SEY E ++V+RLIG+PPGY+G+++ GLL + P+ V L DE+ Sbjct: 543 EFLFGSPSEMIRLDLSEYSEENSVARLIGSPPGYIGYEESGLLVRMLRARPYTVALFDEV 602 Query: 567 EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST 626 EKAHP VF++ LQ+ D G +TD+ GR AD RN + ++T+N S + + Sbjct: 603 EKAHPRVFDVFLQLFDEGRITDSKGRTADARNAIFILTSNL--EPGGGVSYEEMEEGMKR 660 Query: 627 DAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQE 685 ++ + F PE NR+D I+ F L D + +++ K + E +L++ V+L +S E Sbjct: 661 RPRKKGLETFKPELINRIDEIVSFRPLDVDAVRRLLRKTLTETLAELERTHHVALRLSDE 720 Query: 686 ARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 A ++LA GY GAR + RV++ + PL+ +L G L + D + + Sbjct: 721 AEDYLARAGYSPEYGARELRRVVRQFIYVPLSRLILTGELKAHRRWLAVYDDDGITIV 778 >UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G683_9DELT Length = 767 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 332/752 (44%), Positives = 447/752 (59%), Gaps = 79/752 (10%) Query: 83 SFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHG- 141 RVLQRAV HVQ +G+ EVTGAN+LVA+F+E ES A YLL + V R DV FISHG Sbjct: 2 GVGRVLQRAVLHVQGAGKAEVTGANLLVALFAEPESMAVYLLEQKGVRRRDVTLFISHGI 61 Query: 142 ---TRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERA 198 + P +E + ++ + + +L A G IDPL+GRE+EL R Sbjct: 62 GKGNSRSAPRSRPTGPGADGEDEDSVADDPLTAYAVDLAARAASGDIDPLVGREQELTRL 121 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 IQVLCRRRKNNP+LVGE GVGKTA+ EGLA + VPE +AD IY+LD+GSLLAGTK Sbjct: 122 IQVLCRRRKNNPVLVGEPGVGKTAVVEGLALAVHDQKVPEPIADAHIYALDMGSLLAGTK 181 Query: 259 YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIK---------- 308 +RG FE+R KA++ +E+ +ILFIDEIHT+IGAGA SGG +DA+N++K Sbjct: 182 FRGQFEERLKAVVAAIEEQPGAILFIDEIHTVIGAGATSGGSMDASNMLKPALNAGRVRC 241 Query: 309 ---------------PLLSSG--KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 P L+ KI ++ TT + + A + T +I Sbjct: 242 IGATTYKEYKNFDRDPALARRFQKIEIVEPTTDEAILILQGLKPAYEAH-HNVSYTPDAI 300 Query: 352 EETVQII-NGLKPKYEAHHDVRYTAKA-VRAAVELAVKYINDRHLP-------------- 395 EE+V++ L+ + + + A + K LP Sbjct: 301 EESVRLAHKYLRDRRLPDSAIDVMDETGAAARLGDYGKAKPAGALPAGDEDAPEGADSKE 360 Query: 396 -------DKAIDVIDEAGARARLMPVSKRKK----------------------TVNVADI 426 D+ + E A R P ++V + Sbjct: 361 PKAEEAADEMTLAVGETTALERRDPGPVIHTGEAAPREAAPGAGEAAEAGEAIIIDVPQV 420 Query: 427 ESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 E+V+AR+ARIP KSVS DR LK LG+ L+ ++FGQD+A+ T+AIK ARAGL K Sbjct: 421 ETVIARMARIPPKSVSTDDRAVLKGLGEGLRQVLFGQDEAVATATKAIKRARAGLARPDK 480 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 P+G FLF GPTGVGKTE+ QL++ LG+ LRFDMSEYME+H+VSRLIGAPPGYVGFDQG Sbjct: 481 PIGCFLFTGPTGVGKTELARQLARLLGMPFLRFDMSEYMEKHSVSRLIGAPPGYVGFDQG 540 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G LTD+V K+PH+++LLDEIEKAHPD+F++LLQVMD+ TLTD G+K DFRNV+L+MT+N Sbjct: 541 GQLTDSVAKNPHSIVLLDEIEKAHPDIFSVLLQVMDSATLTDTTGKKTDFRNVILIMTSN 600 Query: 607 AGVRETERKSIGLIHQDNSTD--AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 AG E ++ +G D + D A + +++ F+PEFRNRLD I+ F L VI +V DK Sbjct: 601 AGAFEMTQRKVGFGSDDGNVDSAANKALERTFSPEFRNRLDKIVTFGQLPQPVIEKVADK 660 Query: 665 FIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 + EL++QL ++ V L + AR+W++ KGYD+ GARPMARVI + +K L +ELLFG Sbjct: 661 MLRELEIQLSERDVRLTWTPAARDWVSRKGYDKKFGARPMARVIDEAIKGALVDELLFGR 720 Query: 725 LVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 L GG V V D+ ++EL + F + + + EA Sbjct: 721 LEGGGSVEVDCDRAEDELVFRFTARDEDEGEA 752 >UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit clpA CD4B,chloroplast, putative, expressed n=5 Tax=cellular organisms RepID=Q53N47_ORYSJ Length = 918 Score = 584 bits (1506), Expect = e-165, Method: Composition-based stats. Identities = 262/798 (32%), Positives = 398/798 (49%), Gaps = 105/798 (13%) Query: 21 RHEFMTVEHLLLALLSNPSAREALE---ACSVDLVALRQELEAFIEQTTPVLPASEEERD 77 RH + L P A E A ++ L + + P P Sbjct: 143 RHSHVG--------LRQPHAGRLREMHTASGRPVIGLTPTIVSQKTTKVPKQPRFVARAI 194 Query: 78 TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNF 137 + + A Q + N+L+++ S+ L E+ Sbjct: 195 DNFSREVMNAIAVAHDEAQYIAHLTIGSTNILLSLISQ---YICIFL--LEIILNKAYKM 249 Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 R+ + + + TNL +LA G +DP++GR+K+++ Sbjct: 250 FRAAVRRA---------------TRGAKLATLMEYGTNLTKLAEEGKLDPVVGRQKQIDH 294 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 +Q+L RR KNNP L+GE GVGKTAIAEGLA I GDVPE + T+ SLD+G LLAGT Sbjct: 295 VVQILSRRTKNNPCLIGEPGVGKTAIAEGLAQLIATGDVPETIQQKTVISLDMGLLLAGT 354 Query: 258 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 KYRG+ E+R K +L++++Q+ ILF+DE+HT++ AG+A G +DAAN+ KP L+ G+++ Sbjct: 355 KYRGELEERLKNILEEIKQNGEIILFLDEVHTLVTAGSAEGA-IDAANIFKPALARGELQ 413 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 IG+TT E+ EKD AL RRFQ + I E +++ETV I+ GL+ +Y+ HH V+YT +A Sbjct: 414 CIGATTINEYRKHIEKDAALERRFQPVKIPESTVDETVGILKGLRERYQGHHKVQYTDEA 473 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 + AA EL+ K+I DR LPDKAID++DEAG+ RL K + V D+E+ + + + Sbjct: 474 LVAAAELSHKHIRDRFLPDKAIDLMDEAGSIVRLRNAQ-CKPSKKVNDLEAELKKTLKEK 532 Query: 438 EKSVSQSDRDTLKNLGD-RLKML----------------------VFGQDKAIEALTE-- 472 ++S + K L D L++ V +D A++ Sbjct: 533 NDAISIQNFRRAKQLRDHELQLRTNISALTDKKTQMMEPDAIAMPVVTEDDVRHAISRWT 592 Query: 473 AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQ------------------------- 507 + + + + K + VG+ E Sbjct: 593 GVPLHKVSMDESRKLLKLEEALHRRVVGQGEAVAAVSRAIRRARLGLKHPGRPVASLVFA 652 Query: 508 ---------LSKALG-----------IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 L+KAL ++R DMSEYME+H V+RL+G+PPGYV +GG Sbjct: 653 GPTGVGKSELAKALAAYYYGSSESEEAAMVRLDMSEYMEKHAVARLVGSPPGYVWHGEGG 712 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 607 LT+AV + PHAV+LLDE+EKAH DVF++LLQV+D+G LTD GR DF+N ++VMTTN Sbjct: 713 QLTEAVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGRLTDGKGRTVDFKNTLIVMTTNI 772 Query: 608 GVRETERKSIGLIHQDNSTD--AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKF 665 G +E+K+ F PEF NRLD +I F L+ + ++ Sbjct: 773 GSSLIVNNGGDGAAAAGRIKNTVTDEMKRHFRPEFLNRLDEVIMFQPLTELEVGKIAGIM 832 Query: 666 IVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSL 725 + E ++ +KG+ L+V+ + R + E+G+D + GARP+ R + L+ LA ++L G + Sbjct: 833 LEEFAGRVREKGIKLKVTDKFRELVVEEGFDPSYGARPLRRAVVRLLEDTLAEKMLAGEV 892 Query: 726 VDGGQVTVALDKEKNELT 743 +G V V D N + Sbjct: 893 REGDSVIVDADSAGNAVV 910 >UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3229B Length = 761 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 246/642 (38%), Positives = 364/642 (56%), Gaps = 75/642 (11%) Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 ++ F +L + ARVG ID +IGR+ E+E+ I+VL RRRKNN +L+GE+GVGKTAI Sbjct: 101 SSTPTLDQFGRDLTEDARVGRIDAVIGRDDEIEQTIEVLARRRKNNAVLIGEAGVGKTAI 160 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSIL 282 AEGLA RI + +VPE + + I S+D+G ++AG ++RG FE+R K L+++ D +L Sbjct: 161 AEGLALRIARNEVPETLREVRIVSVDLGGMVAGAQFRGQFEQRLKTALEEVVATDGKVVL 220 Query: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342 FIDE+HTI+GAG A G +DAANL+KPLL+ G++RV+G+TT E+ EKD ALARRF Sbjct: 221 FIDELHTIVGAGGAEGA-MDAANLLKPLLARGELRVVGATTLAEYRK-IEKDGALARRFA 278 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRY---------------------TAKAVRAA 381 + + EPS+E TV I+ GL+P YE HH V+ KA+ Sbjct: 279 AVHVEEPSVEATVAILRGLRPAYEEHHGVKIADAALDAAARLSDRYVTEYHLPDKAIDLM 338 Query: 382 VELAVK------------------YINDRHLPDKAIDVIDEAGARARLMP---------- 413 + + + Y+ + ++A + + Sbjct: 339 DQASARVHLHGERSDVARLQRELHYLQAEKQAAVDAEAYEDAADLRKRIDGVEQQLAALA 398 Query: 414 ------------VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF 461 V D+ +VVA IP + + + L+ L L V Sbjct: 399 ADGADAASSTGDTGTASLAVTETDVAAVVAARTGIPVGELVAGELEKLQELEADLHARVV 458 Query: 462 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLR 518 GQD A+E + + I+ AR GL +P+G+FLF GPTGVGKTE+ LS+ L L+R Sbjct: 459 GQDGAVETVADTIRRARVGLSEGDRPLGTFLFLGPTGVGKTELVKALSERLFGTEKSLVR 518 Query: 519 FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL 578 DMSE+ E HTV+RLIG+PPGYVG+ GG LT+ V + P++V+LLDEIEKAHP+V+N+LL Sbjct: 519 IDMSEFREPHTVARLIGSPPGYVGYGDGGQLTEPVRRRPYSVVLLDEIEKAHPEVWNVLL 578 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS-------TDAMEE 631 QVMD+G LTD GR DF N VLVMT+N G +++++++G D + Sbjct: 579 QVMDDGRLTDGEGRTVDFANTVLVMTSNLGAPKSKKQALGFATSDGEGERGDVAAQMVAA 638 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD-QKGVSLEVSQEARNWL 690 K+ F PEF NR+D ++ FD LS + + ++ + + ++ +L ++ + LEV + L Sbjct: 639 AKRAFLPEFVNRIDELVVFDALSAEQVERIGELIVERVEERLASERDIELEVEPKLIARL 698 Query: 691 AEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVT 732 + +G+D GARP+ R ++ L+K L ++ G L DG +V Sbjct: 699 SREGFDPEYGARPLQRHVRRTLEKELTKAIVEGRLNDGDRVV 740 >UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GY73_PARBA Length = 732 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 245/663 (36%), Positives = 363/663 (54%), Gaps = 69/663 (10%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 G+ + + +E + +L A+ G +DP+IGR+ E++R IQ+L RR KNNP+L+ Sbjct: 71 GTHRMNMGGEPEKSALEEYGVDLTARAKDGKLDPVIGRDGEIQRTIQILSRRTKNNPVLI 130 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 G +G GKTAI EGLA RIV+GDVPE + + + SLD+G L+AG K+RGDFE+R K +LK+ Sbjct: 131 GSAGTGKTAILEGLAQRIVRGDVPESVKNKRVISLDLGQLIAGAKFRGDFEERLKKVLKE 190 Query: 274 LEQD-TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFE 332 +E+ ILF+DE+HT++G G A G +DA+NL+KP LS G+++ G+TT E+ E Sbjct: 191 VEEAQGGVILFVDELHTLLGLGKAE-GSIDASNLLKPALSRGELQCCGATTLNEYRQ-IE 248 Query: 333 KDRALARRFQKIDITEPSIEE------------TVQI----------------------- 357 KD ALARRFQ I + EPS + T+QI Sbjct: 249 KDVALARRFQPIVVEEPSESKPDAIQELDRQIMTIQIELESLRKETDIPSKERREKLEEL 308 Query: 358 ---------------------INGLKPKYEAHHDVRYTAKAVRAAVELAV----KYINDR 392 ++ +K E R + + A +Y Sbjct: 309 LKTKQDEVKEFTDVWEKEKAELDAIKQAKEDLERARVDLEQAQREGNFAKASELRYSIIP 368 Query: 393 HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNL 452 L +K + V +V DI VV+R IP + + + L ++ Sbjct: 369 KLENKLPKEGSDTATSTTADGVVLLHDSVTSDDIAGVVSRTTGIPVNKLMAGEVEKLIHM 428 Query: 453 GDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 D L+ V GQD+A+ A+ A++M RAGL E++P+ SF+F GPTGVGKTE+ +++ L Sbjct: 429 EDTLRQSVRGQDEALCAVANAVRMQRAGLSGENRPLASFMFLGPTGVGKTELCKKMAGFL 488 Query: 513 GI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA 569 +LRFDMSE+ E+HTVSRLIG+P GYVG++ G LT+AV + P+AVLL DE EKA Sbjct: 489 FSTESAVLRFDMSEFQEKHTVSRLIGSPAGYVGYEDAGQLTEAVRRKPYAVLLFDEFEKA 548 Query: 570 HPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQ---DNST 626 H D+ +LLQV+D G LTD G K DFRN ++V+T+N G L + + + Sbjct: 549 HRDISALLLQVLDEGFLTDAQGHKIDFRNTLIVLTSNLGAEILVGSDPTLGEEVSTEIKS 608 Query: 627 DAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEA 686 M ++ + PEF NR+D I F LS + +VD + ELQ++LD + ++L+V Sbjct: 609 AVMATVQTSYPPEFLNRIDEFIIFKRLSRKALRDIVDIRLRELQLRLDDRRITLKVDDGV 668 Query: 687 RNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 + WL +KGYD GARP+ R+I + LA++++ G + G V L+ +K+ L Sbjct: 669 KGWLCDKGYDPRYGARPLNRLIAKEIGNRLADKIIRGQVTTGQVAHVTLNADKSGLNVAT 728 Query: 747 QSA 749 + A Sbjct: 729 EEA 731 >UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HM97_VITVI Length = 875 Score = 580 bits (1494), Expect = e-164, Method: Composition-based stats. Identities = 262/801 (32%), Positives = 411/801 (51%), Gaps = 87/801 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 + ++ + A+E++H+ + EHL+ ALL N AR VD L + Sbjct: 86 FTEMAWQAIVSSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKAGVDNTRLLDATD 145 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 FI++ V+ E + + ++QRA + + G + V+ ++++A +Q Sbjct: 146 KFIQRQPKVI---GESAGSMLGRDLESLIQRAREYKKEYGDSFVSVEHLVLAFVQDQR-F 201 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 L + ++S+ + + I R + DP G E +E + +L + Sbjct: 202 GKQLFKDFQISQKALKSAI-EAIRGRQQVIDQDP---------EGKYEALEKYGKDLTAM 251 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G +DP+IGR+ E+ R IQ+L RR KNNP+L+GE GVGKTAI+EGLA RIVQGDVP+ Sbjct: 252 AKAGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQA 311 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASG 298 + + + SLD+G+L+AG K+RG+FE R KA+LK++ E D +ILFIDEIHT++GAGA +G Sbjct: 312 LMNRKLISLDMGALIAGAKFRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGATNG 371 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA NL+KP+L G++R IG+TT E+ EKD AL RRFQ++ + +P++E+T+ I+ Sbjct: 372 A-MDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISIL 430 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GL+ +YE HH VR + A+ A L+ +YI+ R LPDKAID++DEA A+ ++ SK Sbjct: 431 RGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPT 490 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDK------------- 465 + + ++ +D L L L +L Q + Sbjct: 491 ALDEINRSVLKLEMERLSLTNDTDKASKDRLSRLEAELSLLKEKQAELSEQWEHEKSVMT 550 Query: 466 AIEALTEAIKMARAGLGHEHKP----VGSFLFAGPTGVGKTEV---TVQLSKAL--GIEL 516 ++++ E I + + + L G + ++ +L + + G + Sbjct: 551 RLQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLENAEKELDEYMKSGKSM 610 Query: 517 LRF-----DMSEYMERHTVSRLIGA----PPGYVGFD-----------------QGGLLT 550 LR D++E + R I + P VG +GG LT Sbjct: 611 LREEVTGNDIAEIVSLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALEGGQLT 670 Query: 551 DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR 610 + V + P+AV+L DEIEKAH DVFN+ LQ++D+G +TD+ GR F N V++MT+N Sbjct: 671 ETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSN---- 726 Query: 611 ETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQ 670 M+ + IF PEF NR+D I F L D I +V + +Q Sbjct: 727 ---------------QRVMDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVKLQLERVQ 771 Query: 671 VQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ 730 ++L + + L+V++ A L GYD GARP+ RVIQ N++ LA +L G D Sbjct: 772 LRLADRKMKLQVTETAIQLLGSLGYDPNYGARPVKRVIQQNVENELAKGILRGEFKDEDT 831 Query: 731 VTVALDKEKNELTYGFQSAQK 751 V + D E + G QK Sbjct: 832 VLI--DTEVTAFSNGQLPQQK 850 >UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacterineae RepID=A7HAC7_ANADF Length = 840 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 266/769 (34%), Positives = 390/769 (50%), Gaps = 54/769 (7%) Query: 11 NMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELEAFIEQTTPV 68 + A E + HLL+A+ + +A + L AC + L LR ++ + P Sbjct: 78 ERSREVAESVGAEEVDCLHLLIAMGRVRASAAHQLLGACGLQLSTLRNVALSYFTASMPR 137 Query: 69 L-----------------PASEEER----DTQPTLSFQRVLQRAVFHVQSSGRNEVTGAN 107 P E R D L L++A+ ++ V Sbjct: 138 RLRELQPVQVRPAQPLTPPRRSEPRARAADPSRDLQLDAHLEQALGDATATDGEAVHPER 197 Query: 108 VLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG-- 165 + A ++ S+ + D ++ G++ A Sbjct: 198 GVSA-AADTRSRGT----TPPPTSTDAPEAAHPERSVSADAETRSRGTRARRSPHALDPK 252 Query: 166 -EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 + NL +LA G +DPL+GRE+E+E AI VL +RR NNPLLVGE GVGKTAI Sbjct: 253 ELPWLSQLGRNLTELAAAGRLDPLVGREQEVEEAIDVLGKRRTNNPLLVGEPGVGKTAIV 312 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILF 283 EG+A R++Q + I +D+ S++AGT RG F ++ + +++ + ++F Sbjct: 313 EGIAQRLLQ-----SARERVIVEIDMASVVAGTSLRGAFSEKLLGIQEEVRRAAGRVVVF 367 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDEIHT++GAG A G DAAN +K L G+ IG+TT+ E+ EKD AL RRF Sbjct: 368 IDEIHTLMGAGQAGEGPQDAANELKAALGRGEFPCIGATTHDEYRQHIEKDPALERRFTP 427 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + + EPS+ +TV I+ GL P+YE HH VR+ A+ AA L+ +Y+ DR LPDKA+ +D Sbjct: 428 VLVREPSVADTVTILRGLAPRYEKHHRVRFADGALEAAASLSARYVTDRFLPDKAVSALD 487 Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 AG+RA ++ + A++A IPE + SDR+ + L L+ V G Sbjct: 488 LAGSRASRAGAAEVDAADVARTV----AKMAGIPESRLLASDRERILGLEVALRDRVVGH 543 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFD 520 AI + +K AG +P+GSFLF GPTGVGKTE+ L+ AL L++ D Sbjct: 544 ADAIARVAAVLKRNFAGFAT-RRPMGSFLFLGPTGVGKTELARALADALYGAPDALVQLD 602 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MSE E V+RL+GA PGYVG+ +GG LTDAV + P +V++LDEIEKAH DV +LLQV Sbjct: 603 MSECAETTGVARLVGAAPGYVGYGEGGQLTDAVRRRPASVVVLDEIEKAHRDVQMLLLQV 662 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH-------QDNSTDAMEEIK 633 ++ G LTD GR+ DF N V+V+T+N G E R S G + Q + ++ + Sbjct: 663 LEEGRLTDGRGRQVDFSNAVVVLTSNLGAEEATRTSTGAMGFGAAERVQPRTDRVLQAAR 722 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD-QKGVSLEVSQEARNWLAE 692 PE NRLD + F LS + + +V + +L+ ++ + E + A L E Sbjct: 723 GAVPPELWNRLDERVCFSPLSREDVAKVARLLVAGSSRRLEAERRIRFEATDGAIAHLVE 782 Query: 693 K-GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 G+D A+GARPM IQ ++ PLA +L G L G V +D Sbjct: 783 NGGFDAALGARPMRGAIQRLVEAPLAERILAGELGPGDVAIVDVDAAGG 831 Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 17/151 (11%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELEAF 61 + EL + A A + + +T H LLA + P+ A L+ +D L + Sbjct: 7 SMELAQVIAEAADIAASVK-QKLTSAHQLLAFFTVPNRAEILLKERGIDEDRLLAAMTG- 64 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + +P + + +R+ +S G EV ++L+A+ + S A Sbjct: 65 --------------KPKEPEGVLRDLRERSREVAESVGAEEVDCLHLLIAMGRVRASAAH 110 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSD 152 LL + + N P + + Sbjct: 111 QLLGACGLQLSTLRNVALSYFTASMPRRLRE 141 >UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bigelowiella natans RepID=Q3LW37_BIGNA Length = 897 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 243/824 (29%), Positives = 411/824 (49%), Gaps = 87/824 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL---SNPSAREALEACSVDLVALRQEL 58 +++L L +A A +T +LL +L + + L+ V+ + R E Sbjct: 67 FSEDLTNILALAQMEAAARSTFKITGPFILLGILMARGSTTGYAMLKTWKVNYLKARIEA 126 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + T + E R+L A + G ++ +V++A+F + S Sbjct: 127 DKIRSDLTNLF--GELPETYSFDDEAHRILDYAERYANFFGLVQIETIHVVMAMFRYKRS 184 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQA------GGEERMENF 172 A ++ + + I R + + G +++ E+ ++ F Sbjct: 185 NAYRIIETI-TPNFESLEEIVDNIRPNISLKRDSKGFIYQAQKSELPELDPESEDIIDTF 243 Query: 173 TTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 +L + A G DP+IGR+KE++R I+VL R+ KNNP LVG+ GVGKTAIAEGLA+RI Sbjct: 244 GVDLTEKAEFGEGDPVIGRKKEIDRLIRVLARKSKNNPCLVGDPGVGKTAIAEGLAYRIW 303 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIG 292 +VPE + + I +L++ ++AG+KYRGDFE R ++++ + + ILFIDEIHTI+G Sbjct: 304 NDEVPEFLKNKRIINLELTKIVAGSKYRGDFESRILSIIEMARFEDSVILFIDEIHTIMG 363 Query: 293 AGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIE 352 AG++ G +DAAN++KP LS G+I +IG+TT +EF + D AL RRFQ + + EP+I Sbjct: 364 AGSSE-GTLDAANMLKPPLSRGEISLIGATTEEEFRKYIKADGALERRFQAVKVPEPTIS 422 Query: 353 ETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM 412 E +QI++G+K + +H V Y+ +A+ A V+ + +YI+D+ LPDKAID++DE+GA ++ Sbjct: 423 EAIQILHGIKKNFGNYHGVVYSDEAIEACVKFSKQYISDKFLPDKAIDLLDESGAFVKMK 482 Query: 413 PVSKRKKTVNVADIESVVARIARIPEKSVSQ-------SDRDTLKNLGDRLKMLVFGQDK 465 K + + + + Q ++ LK + L+ + Q+ Sbjct: 483 EGYAIKNIEDYTFLIKSYRETKKAVVEKDIQKLKATLITEIKALKKVEQVLQKIKLSQEA 542 Query: 466 AIEALTEA-----------------IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL 508 + +K+ + + +G+ E + Sbjct: 543 IKRDINNIRVVKVPDVETVIEEMTGVKIKEVSKSESENLLNLESILHKSVIGQEEAVTAV 602 Query: 509 SKAL-----------------------------------------GIELLRFDMSEYMER 527 SKA+ ++RFDMS++ E+ Sbjct: 603 SKAMRKSRVGLRDPKRPIASFIFAGPTGVGKTELAKTLSRVYFDSEDAMIRFDMSDFAEK 662 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 H VS+LIG+PPGY+G+ GG LT+AV K PH+++L DE+EKAHPDV+ LLQV+D+G L Sbjct: 663 HNVSKLIGSPPGYIGYSDGGQLTEAVRKTPHSLVLFDELEKAHPDVYLPLLQVLDDGRLA 722 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAME---------EIKKIFTP 638 D+ G+ DF+N ++++T+N G +E E + + + D E I + F P Sbjct: 723 DSKGKIVDFKNTIIILTSNLGAKEVEARRKAIKQSSETEDISEKESFSIYNAAIAEYFRP 782 Query: 639 EFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRA 698 EF NR+D II F L+ ++++ F+ ++ + + G++++ ++ R + E GY A Sbjct: 783 EFLNRIDEIIIFKRLTQSQVYEIFAIFMNSVKHRAAKLGITIQETERLRQLVTEAGYTPA 842 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 GARP+ R I ++ PL+ +L +V G V + +K Sbjct: 843 FGARPLKRTISRLIESPLSEMILSNEVVSGDTVLLDYYNKKVTF 886 >UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n=6 Tax=Bacteria RepID=C8NYT7_9CORY Length = 967 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 264/883 (29%), Positives = 420/883 (47%), Gaps = 158/883 (17%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + +A AR+ H ++ EH+LL L+ A +ALE+ ++L +R+E+E Sbjct: 5 FTDRARRVIVLAQQEARDLNHNYIGTEHILLGLIQEGEGVAAKALESMGINLDDVRREVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + T ++VL+ ++ G + +L+ + E E Sbjct: 65 EIIGRG-----SQPHTGHVPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGV 119 Query: 120 AAYLLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPN----------------- 158 AA +L K R V+ +S + G Q Sbjct: 120 AAQVLIKLGADLPRVRQQVIQLLSGYEGGEGQNPEIAEGQQGGPGLTGAGAGSGSMGGMG 179 Query: 159 -----SEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 ++ + ++ F NL A+ G +DP++GR+KE+ER +QVL RR KNNP+L+ Sbjct: 180 SGRGGNQGERSNSLVLDQFGRNLTAAAKEGKLDPVVGRDKEIERIMQVLSRRTKNNPVLI 239 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 GE GVGKTA+ EGLA I G VPE + D +YSLD+GSL+AG++YRGDFE+R K +LK+ Sbjct: 240 GEPGVGKTAVVEGLALDIANGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKE 299 Query: 274 LEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEK 333 + Q + ILFIDEIHT++GAGAA G +DAA+L+KP L+ G+++ IG+TT E+ EK Sbjct: 300 INQRGDIILFIDEIHTLVGAGAAEGA-IDAASLLKPKLARGELQTIGATTLDEYRKHIEK 358 Query: 334 DRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH 393 D AL RRFQ + + EPS+E T+QI+ GL+ +YEAHH V YT A+ AA L+ +YINDR Sbjct: 359 DAALERRFQPVQVDEPSVENTIQILKGLRDRYEAHHRVSYTDDALAAAANLSDRYINDRF 418 Query: 394 LPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLG 453 LPDKA+D++DEAGAR R+ ++ + D++ + + R E ++ D + L Sbjct: 419 LPDKAVDLLDEAGARMRIKRMTA---PKGLRDVDDRITEVRREKEAAIDAQDFEKAAGLR 475 Query: 454 DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 D G+++A + K RAG + VG+ ++ L+ G Sbjct: 476 DT--ERKLGEERAEKE-----KQWRAGELEDI-----------AEVGEEQIADVLANWTG 517 Query: 514 IELLRFDMSE-----YMERHTVSRLIG-------------------------------AP 537 I + + SE +ME R+IG A Sbjct: 518 IPVFKLTESESSRLLHMEDELHQRIIGQDDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAG 577 Query: 538 PGYVGFDQ-GGLLTDAVIKHPHAVLLLD--EI--------------------------EK 568 P VG + L + + +++ +D E EK Sbjct: 578 PSGVGKTELSKALAEFLFGDEDSLIQVDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEK 637 Query: 569 AHPDVFNILL----------------QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET 612 F+++L QV++ G +TD GR DF+N VL+ T+N G + Sbjct: 638 VRRKPFSVVLFDEIEKAHKEIYNTLLQVLEEGHVTDGQGRNVDFKNTVLIFTSNLGTSDI 697 Query: 613 ERK-SIGL----------IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 + +G ++ +E+KK F PEF NR+D I+ F L+ + I ++ Sbjct: 698 SKAVGLGFSGASTTDSDAQYERMKQKVHDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEM 757 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 V+ L L+ + + +E+S++A+N LA +G+D +GARP+ R IQ ++ L+ ++L Sbjct: 758 VELLAGRLAKNLETQDMGIELSEDAKNLLAARGFDPVLGARPLRRTIQREIEDVLSEKIL 817 Query: 722 FGSLVDGGQVTVAL-----------DKEKNELTYGFQSAQKHK 753 FG + G + V + D E E T+ + + Sbjct: 818 FGEIGAGEIIEVGVTNWDGKTDSPRDYENAEFTFTPKPKPLPE 860 >UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=A3A5U3_ORYSJ Length = 691 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 220/626 (35%), Positives = 351/626 (56%), Gaps = 36/626 (5%) Query: 151 SDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNP 210 DP P + A + ++ F +L A DP++GRE+E++R + +L R+ KN+ Sbjct: 37 KDPPPPPPPRQPAAAKGTLDAFGRDLTAEAANA--DPVVGREEEIDRVVCILSRKSKNSA 94 Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +LVG +GVGKTAIAEGLA RI +G+V V+ + L++ ++++GT YRG FE+R + Sbjct: 95 VLVGAAGVGKTAIAEGLAQRIARGEVSGVLEGARVVELNVAAMISGTSYRGTFEERMTGV 154 Query: 271 LKQLEQD-----TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQ 325 + + E + +LF+DEIH ++GAG SGG +DA+N++KP L+ G++R +G+TT+ Sbjct: 155 IAEAEAEADAAAGKVVLFVDEIHMLLGAGRVSGGCIDASNMLKPALARGRVRCLGATTHD 214 Query: 326 EFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 385 E+ +D A RRFQK+ + EPS+++TV I+ LKP Y+ HH Sbjct: 215 EYHRYMVRDAAFERRFQKVHVAEPSVDDTVAILRRLKPSYQDHHAWISRTPPSSPPPSSP 274 Query: 386 VKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESV-------VARIARIPE 438 V +AID++DEA A ARL+ ++KK A +A+ IP Sbjct: 275 VATS-------QAIDLVDEACATARLLMDRRKKKQAQAAVAPKDENVGPDHIAQWTGIPV 327 Query: 439 KSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTG 498 S+ + +R L L L V GQD+A+ A+ EA+ +R+GLG+ ++P GSFLF GPTG Sbjct: 328 ASLGEDERKKLLELPQLLHRRVIGQDEAVGAVAEAVVRSRSGLGNPNQPSGSFLFLGPTG 387 Query: 499 VGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIK 555 V KTE+ L++ L L+R DMSEY+ +V+RLIG+ PG G+D+GG LT+ V Sbjct: 388 VSKTELAKALAEQLFGNAKLLVRIDMSEYVNASSVTRLIGSAPGTNGYDKGGQLTELVRC 447 Query: 556 HPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK 615 P++V+L DE+EKA VFN+ LQ++D+G LTD GR DF N +++MT+N G + Sbjct: 448 RPYSVVLFDEVEKADAAVFNVFLQILDDGRLTDGQGRTVDFTNTIIIMTSNLGAQHLADA 507 Query: 616 SI----------GLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKF 665 + + ++++ F PE +RL ++ F LS + + +V Sbjct: 508 AAADASHKDDATEAAAAAAKQRVLADVQRHFRPELISRLTEMVVFRPLSGEQLRKVARLQ 567 Query: 666 IVELQVQLDQKGVSLEVSQEARNWLAEKGYD--RAMGARPMARVIQDNLKKPLANELLFG 723 + + +L +KG+ L+V+ A + + + D RA GARP+ R ++ ++ ++ ++ Sbjct: 568 LRGMAARLAEKGIGLDVANAALDVVLARSSDQVRAYGARPIKRCLEKDVMTRISKMVVQE 627 Query: 724 SLVDGGQVTVALDKEKNELTYGFQSA 749 D VTV D+ K EL + Sbjct: 628 EADDDCYVTVEADQGKEELVFTVDKQ 653 >UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus RepID=A8YTL4_LACH4 Length = 707 Score = 560 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 247/668 (36%), Positives = 384/668 (57%), Gaps = 69/668 (10%) Query: 150 SSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNN 209 SS+ S P + +Q + + +L + A+ DP+IGR+++++ I++L RR+KNN Sbjct: 41 SSNMSSAPQTIQQNPQQPNEKPIGVDLVEEAKKNNFDPVIGRDEQIDNVIEILSRRKKNN 100 Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKA 269 P+L+G +GVGKT+I EGLA RI G+VP MA+ I S++I ++AG+ RG FE+R K Sbjct: 101 PVLIGPAGVGKTSIVEGLAERIASGNVPAKMANMHIISVNINDMVAGSSLRGSFEERLKK 160 Query: 270 LLKQLEQDTNSILFIDEIHTIIGAGA--ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEF 327 ++ + + D N +LFIDE+H I+GAG+ + DAAN++KP L++G +++IG+TT EF Sbjct: 161 VIDKAKSDPNIVLFIDELHNIVGAGSTDSENNNGDAANILKPALANGDLKLIGATTTSEF 220 Query: 328 SNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK 387 EKD AL+RRFQ + + EP+ + ++I+ GLK KYE +H V+Y+ +++ AVEL+ + Sbjct: 221 QR-IEKDPALSRRFQAVQVPEPTTDVAIKILKGLKKKYEDYHHVKYSDDSLKLAVELSER 279 Query: 388 YINDRHLPDKAIDVIDEAGARAR------------------------------------- 410 YI R+LPDKAID++DEAGA+ Sbjct: 280 YIQGRYLPDKAIDLMDEAGAKKALLVQPTDEKNLKNQISALEAKKSEAAKAEDYDKAGEI 339 Query: 411 -----------LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 +K V DI +++ + +IP + + +L +LK Sbjct: 340 KTKIAELEKQLKNVDTKNIPEVTEKDIYAIIEQKTKIPMSELHADEAQKNLDLAKKLKKN 399 Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IEL 516 V QD+AI+ +T+AI + +P GSFL GPTGVGKTE+ QL+ L L Sbjct: 400 VIDQDRAIDVITDAIARKQI-FKDSDRPTGSFLLTGPTGVGKTELAKQLAIQLFGNKDHL 458 Query: 517 LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNI 576 +R DMSEY + V++LIG+ PGYVG+ +GG LT+ V P++++L DEIEKA+P VFN Sbjct: 459 IRLDMSEYQDEMAVNKLIGSAPGYVGYGEGGQLTEKVRHQPYSLILFDEIEKANPQVFNA 518 Query: 577 LLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIF 636 LLQ+MD+G LTD GR F++ +L+MT+NAG + + G + QD A+E F Sbjct: 519 LLQIMDDGRLTDAQGRTVSFKDTILIMTSNAGFSDKLLED-GKVDQDKLISALE---NYF 574 Query: 637 TPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYD 696 PEF NRLD I+ F+ L+ + ++++ ++ ++ L +KGV++EVS EA+N+LAEKGYD Sbjct: 575 RPEFLNRLDAIVPFNSLTEQDMGKIINIYLKKMSHVLAKKGVTVEVSDEAKNFLAEKGYD 634 Query: 697 RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL------TYGFQSAQ 750 + GARP+ RV++ NL+ P A +L + + + L + Sbjct: 635 KKFGARPLRRVVEQNLETPAAKLILR----EPDTKKIEFTADDKHLYLNGKAIFDISPKV 690 Query: 751 KHKAEAAH 758 + K + Sbjct: 691 EEKVKEDE 698 >UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1 Tax=Sorghum bicolor RepID=C5YMW4_SORBI Length = 818 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 232/678 (34%), Positives = 356/678 (52%), Gaps = 86/678 (12%) Query: 112 IFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGE----- 166 IF+ + + +L K +S V I+ R+ S +S E+ + Sbjct: 186 IFALAQEETQHLALKSGIS--QVFQIINGRVRRGSSESPLKTRSNDDSLEKRSSKTCAET 243 Query: 167 ------ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 ++ + T+L LA G +DP+IGR+K++++ +Q+L R+ KNNP L+GE GVGK Sbjct: 244 KNKISTPTLDEYGTDLTTLANKGKLDPVIGRQKQIDQVVQILSRKGKNNPCLIGEPGVGK 303 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 280 TA+ E LA I GDVPE M Sbjct: 304 TAVVESLAQLIAMGDVPETMQGKKFT---------------------------------- 329 Query: 281 ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR 340 +HT++GAGAA G +DAAN++KP L+ G+++ IG+TT + EKD AL RR Sbjct: 330 ------LHTLVGAGAAVEGAIDAANILKPALARGELQCIGATTTDGYMKHIEKDPALERR 383 Query: 341 FQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 F+++ + EP +EE ++I+ GL+ +YE HH V+Y +A+ AA EL+ KYI+DR LPDKAID Sbjct: 384 FRQVKVPEPMVEEAIEILKGLRERYETHHKVQYADEALSAAAELSHKYISDRFLPDKAID 443 Query: 401 VIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR----- 455 +IDEAG+ RL + + + +I + ++ + K L DR Sbjct: 444 LIDEAGSLVRLRHAQPKLPKELQDFVTEI-KKITKEKCDTIRIENFKKAKELRDRELELK 502 Query: 456 -----------------LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTG 498 L + GQD+A+ A++ AI+ AR GL +P+ SF+FAGPTG Sbjct: 503 SQLTTTLQIGNDEDGGGLHRRIIGQDEAVTAVSRAIRRARVGLSDPRRPIASFVFAGPTG 562 Query: 499 VGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPP-GYVGFDQGGLLTDAVI 554 VGK+E+ ++ ++R DMSE ME+H V+RL+GAPP + GG LT+AV Sbjct: 563 VGKSELAKAVAAYYYGSEDAMVRLDMSELMEKHAVARLVGAPPGYVGHGEGGGQLTEAVR 622 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 + PH+++LLDE++KAHP+V ++LLQV+D+G LTD GR DFRN +++MT+N G Sbjct: 623 RRPHSLVLLDEVDKAHPEVMDVLLQVLDDGRLTDGMGRTVDFRNTLIIMTSNIGGGNGGS 682 Query: 615 KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD 674 + EE+K+ F PEF NRLD I F L+ ++ + ++ ++ Sbjct: 683 GDGSRSSSKEVVE--EEMKRYFRPEFLNRLDETIVFRPLTRVDGKEIAAVLVSDVAARVS 740 Query: 675 QKG---VSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVD-GGQ 730 ++ V L V++ + + E+G+D GAR + R + L+ LA++LL G +V G Sbjct: 741 RETMMVVELRVTERFMDLVVEEGFDPWYGARALRRAVVMLLEDTLADKLLDGEIVKAGDT 800 Query: 731 VTVALDKEKNELTYGFQS 748 V V D N + G S Sbjct: 801 VIVDADAAGNVVVLGPDS 818 >UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas RepID=C1EC57_9CHLO Length = 1033 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 246/844 (29%), Positives = 407/844 (48%), Gaps = 106/844 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + ++ +A A+ R + VEH+++ L++ + + V + + R++ + Sbjct: 109 FTERAIKAVMLAQQEAKALRRPEVGVEHIVMGLVAEEAKKGGWLGTGVTIDSAREKAKEI 168 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + + + +RV + A+ + + G N + ++ +A+ + Sbjct: 169 VSFDKDRAARRTSTSEVPFSRGAKRVFEAALNNSTNMGMNYIAPEHIALAVAELDDESLV 228 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNS----------EEQAGGEERMEN 171 SR V N + K E + S P ++PN+ Q + + + Sbjct: 229 KYFEMLSTSRTFVKNE-AERRLKTEKEKESGPAARPNTSLAPRQRQQQASQKDEKSPLND 287 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 F +L Q AR IDP+IGR++E+ER IQ+L RR KNNP+L+GE GVGKTAIAEGLA RI Sbjct: 288 FCFDLTQRARDEKIDPIIGRDEEVERVIQILARRSKNNPILLGEPGVGKTAIAEGLALRI 347 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 V G+VPE + + + SLD+G L+AG K RG+ E R L+K+++ + +L IDE+HT+I Sbjct: 348 VSGNVPEFLREKRVLSLDVGLLMAGAKERGELESRVTGLIKEIQDKKDVVLMIDEVHTLI 407 Query: 292 GAGAASGGQ---VDAANLIKP--------------------------LLSSGKIRVIGST 322 GAGA G +D +N++KP L + + + Sbjct: 408 GAGAVGKGGGGGMDISNMLKPPLARGELQCIGATTVDEHRKYIEKDAALER-RFQPVMVE 466 Query: 323 TYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII----NGLKPKYEAHHDVRYTAKA- 377 E + E L R++ + E + + + + + ++ + +A Sbjct: 467 EPSE-EDAIEILFGLRERYEAHHMCEITDDALIAAVQISSRYIADRFLPDKAIDLVDEAG 525 Query: 378 VRAAVELAVKYINDRHLPDKAID-----------------------VIDEAGARARLMPV 414 A ++ + R DKA ++ E R Sbjct: 526 SAARIKQYMAQKERRGEVDKATSMEAMEMWRALKQVSEAKEAAVRGLLFEEATLLRDRER 585 Query: 415 SKRKK--------------------TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD 454 + V V +IE+V A + IP + ++ ++ L N+ Sbjct: 586 EVKTNLSKLGVKVDELTGDGAYGGAKVTVDEIEAVAAMWSGIPVQRMTLDEQAILANMDQ 645 Query: 455 RLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG- 513 L+ V GQ++A+ A++ +++ R GL ++P+ S LFAGPTGVGKTE+T +L++ Sbjct: 646 DLQGSVIGQEEAVSAVSRSLRRTRCGLKDPNRPIASMLFAGPTGVGKTELTKRLAEKYFG 705 Query: 514 --IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHP 571 ++R DMSEYMERH+VS+L+GAPPGYVGF QGG LT+AV + P +LL DEIEKAHP Sbjct: 706 SEDNMVRLDMSEYMERHSVSKLVGAPPGYVGFGQGGTLTEAVRRKPFTILLFDEIEKAHP 765 Query: 572 DVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD---- 627 DVFNILLQ+M++G LTD+ GR F+N ++V+T+N G + + GL Q D Sbjct: 766 DVFNILLQMMEDGRLTDSQGRVVSFKNCLIVLTSNVGSKVIAKGGGGLGFQLQDDDEEGS 825 Query: 628 ---------AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV 678 ++E+K F PE NRLD I+ F L + + ++ + E ++ KG+ Sbjct: 826 AEYKRIREKVLDELKNFFRPEMLNRLDEIVCFKQLEKESVQRIARLMLRETAGRMRLKGM 885 Query: 679 SLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 + ++ A + L E G+D+ GARP+ R I + L+ +L G + +G + D+ Sbjct: 886 EMALTASAMDKLLETGFDKEYGARPLRRAITSIIDDNLSEAMLRGVIHEGDVAVIDYDRS 945 Query: 739 KNEL 742 ++ Sbjct: 946 SDQF 949 >UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Tax=Bacteria RepID=Q1WVA6_LACS1 Length = 830 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 245/822 (29%), Positives = 423/822 (51%), Gaps = 84/822 (10%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEA 60 + L +A +A +H+ + EHLLLAL N A + L++ V V +R+E+E Sbjct: 8 TPSAKQVLVLAQQQANYFKHQAIGTEHLLLALTMEKNGVAAKVLQSFVVTEVDVREEIEH 67 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + ++ P + VL+RA H + +V ++L+A+ + ++ + Sbjct: 68 IVGYGNLQRRGADTYLPYSPRTRY--VLERAREHAKLFNVEKVGTEHILLALLEDDKTIS 125 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQP-NSEEQAGGEERMENFTTNLNQL 179 + +L + V N D T + + ++Q G ++ +L ++ Sbjct: 126 SRILAALNIDLRKVKNITYRTMGVDATTANRTRKKLALSEKKQDNGTPTLDELARDLTEM 185 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 R IDP++GR+ E++R +Q+L RR KNNP+L+GE GVGKTA+AEG + +IV G+VP+ Sbjct: 186 VRKDQIDPVVGRDNEIKRVVQILSRRTKNNPVLLGEPGVGKTAVAEGFSQKIVNGEVPDN 245 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + + LD+GSL+AGTKYRG+FE R K +++++ +D N ILFIDE+HT+IGAG A G Sbjct: 246 LKNKRVMMLDMGSLVAGTKYRGEFEDRLKKIIEEIREDGNVILFIDEMHTLIGAGGAEGA 305 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA+N++KP L+ G+++VIG+TT E+ E D AL RRF + I EP+ E + I+ Sbjct: 306 -IDASNILKPALARGEVQVIGATTLNEYQKYVEADAALERRFASVTINEPTPEVALTILK 364 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+PKYE HH ++ T +A+ +AV+L+ +YI R LPDKAID++DEA AR R ++ +K Sbjct: 365 GLRPKYEKHHQLQITDEALESAVKLSKRYIASRFLPDKAIDLMDEAAARVR---INNAQK 421 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTL-------KNLGDRLKMLV------------ 460 V+ I+ ++ +++ +++ + D + + ++L+ + Sbjct: 422 VDKVSAIKKKLSELSQEKTEALLKEDFEKAAEIRNEELKIQEKLEKQIQRDKDEEDSNNY 481 Query: 461 ---FGQDKAIEALTE--AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA---- 511 + E ++E + + + + + +G+ E +SKA Sbjct: 482 RVKVTAEDIAEVVSEWTGVPVTQINRSEGDRLIRLEKILHNRVIGQDEAVKAVSKAIRRA 541 Query: 512 ---LGIELLRFDMSEYMERHTVSR----------LIGAPPGYVGFDQGGLL----TDAVI 554 L ++ V + + G+ + D + T +I Sbjct: 542 RSGLKDPTRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDSMIRIDMSEYMEKYTTSRLI 601 Query: 555 KHPHAVLLLDE----IEKAHPDVFNILL----------------QVMDNGTLTDNNGRKA 594 P + DE EK + ++++L QV+D+G LTD+ GRK Sbjct: 602 GSPPGYVGYDEGGQLTEKVRNNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKV 661 Query: 595 DFRNVVLVMTTNAGVRET-ERKSIGLIHQDNSTD-------AMEEIKKIFTPEFRNRLDN 646 DFRN +++MT+N G + KS+G +D S D E +KK F PEF NRLD Sbjct: 662 DFRNTIIIMTSNLGATALRDEKSVGFGAKDVSDDYEAMAAKVRETLKKTFRPEFLNRLDE 721 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 I+ F L+ + IHQ+V + ++ ++ ++L+++ A + +AE G+D GARP+ R Sbjct: 722 IVVFHSLNKEEIHQIVKLMAKNIIDRIKEQNINLKITPAAIDIVAEAGFDAEYGARPIRR 781 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 ++QD ++ L+ ELL G++ G VT+ +K E+T ++ Sbjct: 782 ILQDKIEDLLSEELLAGNIETGATVTIG--AKKGEITIKVKN 821 >UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KUA3_TOXGO Length = 970 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 251/895 (28%), Positives = 417/895 (46%), Gaps = 146/895 (16%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS---NPSAREALEACSVDLVALRQEL 58 ++++ L+ A A RH +T H L LL S +LE C ++ L++ + Sbjct: 60 ISRDARDQLDQAEVLAMYMRHRQITPVHFLTVLLEVQGEFSIVRSLEQCGANVYELKKAM 119 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + + P E + + T +RV RA+ Q + + +++ ++F E Sbjct: 120 SNVLIK-LPTSADVEIVDELESTPQLKRVALRALEIAQKDKKQTIGMEHLITSLFEENNL 178 Query: 119 QAAY--------LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERME 170 + + + +H + + +R + + + ++ A EE ++ Sbjct: 179 RKSLEQAGCNVKVFLEHSTTMYENKFKQDVASRSMKKQPTEGSPATSRAKPDASDEEFVQ 238 Query: 171 NFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWR 230 +F ++ +LA G ++P++GR KE++ + VL R+ K NP LVGE GVGKTA+ EGLA R Sbjct: 239 SFGVDMTKLAAEGKLEPVVGRNKEIKEVLTVLSRKGKGNPCLVGEPGVGKTAVVEGLAQR 298 Query: 231 IVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLK-QLEQDTNSILFIDEIHT 289 +V+G VP+ + + ++++D+G+L+AG YRG+FEKR KAL++ + Q+ ILFIDE+H Sbjct: 299 LVEGMVPKSLENKILFAVDLGALIAGATYRGEFEKRMKALIRYAVNQEGRVILFIDELHM 358 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 ++GAG + G +DAANL+KP ++ G+IR++G+TT +E+ I EKD A+ RR + I I EP Sbjct: 359 LMGAGKSD-GTMDAANLLKPPMARGEIRLVGATTQEEY-KIIEKDAAMERRLKPIFIEEP 416 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 S + + I+ L K+E+HH+++ + +A+ AAV L+ KYI +R LPDKAID++DEA A Sbjct: 417 STDRAIYILRKLSDKFESHHEMKISDEAIVAAVMLSHKYIRNRKLPDKAIDLLDEAAATK 476 Query: 410 RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKN------------------ 451 R+ + VA E + + V Q D+ ++ Sbjct: 477 RVKWDLRSLNDDEVAM-ERKNSEQFEEETRKVEQQDQQRIEKQNHGDGTEEELKNLEKEI 535 Query: 452 LGDRLKMLVFGQDKAIEA--LTEAIKM----ARAGLGHEHKPVGSFL--FAGPTGVGKTE 503 L Q+ + A + + I + A L + K L +G+ + Sbjct: 536 EEQSLHEK---QELVLTADDVAQVISLWTGIPLAKLTDDEKSKILRLSDLLHSRVIGQDD 592 Query: 504 VTVQLS----------------------------------KALGIEL-------LRFDMS 522 ++ KAL +E+ +R DMS Sbjct: 593 AVKAVADAMVRARAGLSREGMPVGSFLFLGPTGVGKTELAKALAMEMFHSEKNLIRIDMS 652 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 E+ E H+VSRLIG+PPGYVG D GG LT+AV + PH+V+L DEIEK H + NI+LQ++D Sbjct: 653 EFSEAHSVSRLIGSPPGYVGHDAGGQLTEAVRRRPHSVVLFDEIEKGHQQILNIMLQMLD 712 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQ-------------------- 622 G LTD G DF N V+++T+N G + + Sbjct: 713 EGRLTDGKGLLVDFTNCVIILTSNVGAQYIISAYEQAEKESKTALATFDPKSGNLEQFAE 772 Query: 623 -------------------DNSTDAMEEIKKI--FTPEFRNR-LDNIIWFDHLSTDVIHQ 660 D +++ KK + E R + L I L +V+++ Sbjct: 773 AAKGAEAASEGDDSSSEKKDKKGAVLDKNKKSGNWKKEARRKILSEIAGSGLLKPEVVNR 832 Query: 661 V-----------------VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 + +L+ L +KG+ L + A ++ ++ Y GARP Sbjct: 833 FSGVIIFEPMNPADVRKILAIQSKDLKNALQRKGIELVIDASAEEFIVQRSYTHKFGARP 892 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE-KNELTYGFQSAQKHKAEAA 757 + R + +++ +A +L G L G +VTV K KN L K + A Sbjct: 893 LKRFVDNHIGAKMAPWILSGYLQPGMRVTVVASKRNKNTLEAHVCKVVMGKCDRA 947 >UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomonas reinhardtii RepID=A8I1M5_CHLRE Length = 997 Score = 535 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 247/841 (29%), Positives = 389/841 (46%), Gaps = 111/841 (13%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE-ALEACSVDLVALRQELEA 60 + ++ +A A A+ H + EH+LL L++ S + V + +EA Sbjct: 78 FTERSIKTVMIAQAEAKAFGHTEVNTEHILLGLVAEESLSKNGYLNSGVSSERAKAAVEA 137 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + PV + +++ + A + S N ++ ++L+A+ S + Sbjct: 138 LFGRKRPV----SHGESIPFSREVRKMFENATHECKRSNVNWISPEHILLAMLSMPDCNG 193 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 +L + + D + + ++EQ G + E + +L Sbjct: 194 KRVLHSLSADVEGLKAEAGKRLKGDTDAEQAKKKQGAAAKEQ--GPKMTEEYCKDLCAEV 251 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV---QGDVP 237 R G IDP++GR++E+ R Q+L RR KNNP+L+GE GVGKTAIAEGLA IV +P Sbjct: 252 RAGRIDPVVGRDREVGRVCQILARRTKNNPILLGEPGVGKTAIAEGLAAAIVHRAASPLP 311 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 E + I LD+G L+AG K RG+ E R L+ ++ + N IL IDEIHT++GAG+ Sbjct: 312 EFLHSKRILQLDVGLLIAGAKERGELESRVTKLIAEIREAGNIILMIDEIHTLVGAGSVG 371 Query: 298 GGQ---VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 G +D ANL+KP L+ G+ +VIG+TT E E+D AL RRFQ + + EP+ E T Sbjct: 372 RGGGGGLDIANLVKPALARGEFQVIGATTLDEHRKYIERDAALERRFQPVTVDEPTPEAT 431 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV 414 + I+ GLK +YE HH YT +A+ AAV L+ KYI DR LPDKAID+IDEAG+RAR+ Sbjct: 432 LTILQGLKERYERHHRCAYTEEALAAAVALSHKYIADRFLPDKAIDLIDEAGSRARIAAY 491 Query: 415 SKRKKTVNVADIESVVARIARIP------EKSVSQSDRDTLKN-----LGDRLKML---- 459 + R+ A ++ P +Q + N L L + Sbjct: 492 TARQNQAR-AGAGGRQQQLTMAPGGAGGDLSRGNQKQEEACINANPGVLPACLPQVDYRA 550 Query: 460 -------------VFGQDKAIEALTEA---IKMARAGLGHEHKPVGSFLFAGPTGVGKTE 503 V G + IEA+ A I + R G + + + VG+ + Sbjct: 551 ELAGPSCEGSVLPVVG-VEDIEAIVAAWTSIPVERMSDGEKERLLNMRHTLASHVVGQAD 609 Query: 504 VTVQLSKALGIELLRFD-------------------------MSE--YMERHTVSRL--- 533 +S AL + +SE Y R + RL Sbjct: 610 AVEAISTALCRARCGLNLPRRPVAALLFVGPTGVGKTELAKVLSEQYYGSREALLRLDMS 669 Query: 534 -----------IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 +GAPPGYVGF GG LT+A+ + P +V+L DEIEKAHPDVF+ILLQ+++ Sbjct: 670 EYMERHSVSKLVGAPPGYVGFGDGGKLTEAIRRRPFSVVLFDEIEKAHPDVFSILLQILE 729 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRET--------------ERKSIGLIHQDN---- 624 +G LTD+ GR F+N ++++T+N G R R +G D Sbjct: 730 DGRLTDSQGRVVSFKNAMIILTSNVGSRLIAAAGNAARNGAGVFSRPGMGAGPTDEKLQA 789 Query: 625 ------STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV 678 + + E++ F PE NR D + F L + + + + + + ++G+ Sbjct: 790 AQAFKLKQEVLGEVRGFFAPELLNRFDETVVFQRLRREDVAHIAQLLLAQTIARAGERGL 849 Query: 679 SLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 L ++ + +G+ GARP+ + I + PL++ +L G + + L+ + Sbjct: 850 GLRIAPALMEHIVAEGHSDEYGARPLRQAIVRLVDDPLSDAVLHRKFGAGVALVLGLNSD 909 Query: 739 K 739 Sbjct: 910 G 910 >UniRef50_Q7RAR9 ATP-dependent Clp protease, ATPase subunit-related n=2 Tax=Plasmodium (Vinckeia) RepID=Q7RAR9_PLAYO Length = 1122 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 223/846 (26%), Positives = 402/846 (47%), Gaps = 137/846 (16%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS------NPSAREALEACSVDLVALR 55 ++ +L L A A++ F+ + +L+++++ + L ++ L L+ Sbjct: 283 FSENCKLVLQNAILEAKKKNKIFVNLTDILISIINIAQENKECDFVKYLNELNISLSDLK 342 Query: 56 QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE 115 +++ + E L + +E N Sbjct: 343 KQVTNYDENN------------------LNSNLIHCPINKNPIKNDEEQDGN------KN 378 Query: 116 QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 + + + +++N +++ E ++ + + ++ + Sbjct: 379 LNNYSDKQNKNMTDQPNNIINNMNNEYINQEKYFKNNEDNNFTQNNKFMSSIITKDCLVD 438 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 + Q A ++ GR+ E++R I++L R++K+NPLLVGE+GVGKTAI E LA+ I++ Sbjct: 439 MVQQAYEKKLENFFGRKDEIKRIIEILGRKKKSNPLLVGETGVGKTAIVEQLAYLILKNK 498 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VP + +C I+ +++G+++AGTKYRG+FE++ K +L + +D +ILFIDEIH I+GAG+ Sbjct: 499 VPYHLKNCKIFQMNLGNIVAGTKYRGEFEEKMKQILANISKDKKNILFIDEIHVIVGAGS 558 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 G +DA+N++KP LSS ++ IG+TT+QE+S E D+AL RRF ++I + ET Sbjct: 559 GE-GSLDASNILKPFLSSDNLQCIGTTTFQEYSKYIETDKALRRRFNCVNIKPLNSNETY 617 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM--- 412 +++ +K YE +H++ YT +A+++ + L+ Y+ + PDKAID++DEAG+ ++ Sbjct: 618 KLLKKIKNSYEQYHNIYYTDEALKSIILLSDDYLPTLNFPDKAIDILDEAGSYQKIKYER 677 Query: 413 --------------------------------------------PVSKRKKTVNVADIES 428 K V IE+ Sbjct: 678 YITKKLRNENNIKTDSIKVSTNTNSNKIDNNSTNVTSQIESNYLVDDLHMKYVTSDVIEN 737 Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 +V++ + I ++ + + ++NL ++L ++ GQ+K I+ L + + A + +KP+ Sbjct: 738 IVSKKSSISFIKKNKKEEEKIQNLKEKLNKIIIGQEKVIDILAKYLFKAITNIKDANKPI 797 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALG--IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 G+ L G +GVGKT +S+ L ++ +MSEY+++H+VS+L G+ PGYVG+ +G Sbjct: 798 GTLLLCGSSGVGKTLSAQVISQYLFNDDNIIVINMSEYIDKHSVSKLFGSYPGYVGYKEG 857 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G LT+AV K P +++L DEIEKAH DV ++LLQ++DNG LTD+ G K F+N + MTTN Sbjct: 858 GELTEAVKKKPFSIILFDEIEKAHSDVLHVLLQILDNGLLTDSKGNKVSFKNTFIFMTTN 917 Query: 607 AGVRET-----------------------------------------------------E 613 G E Sbjct: 918 VGSDIITDYFKVYNKNYANFGFKYYTQKEKIEKPDLQNSTNNNTQNDKDKIQTDLDIFEE 977 Query: 614 RKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL-QVQ 672 + + + + EE+KK F PEF NR+D I F I Q+++ I +L + Sbjct: 978 KIKTNKWYDELKPEIEEELKKKFLPEFLNRIDEKILFRQFLKRDIIQILENMIQDLKKRI 1037 Query: 673 LDQKGVSLEVSQEARNWLA---EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGG 729 +K +++ + ++ YD GAR + R + ++ P+A L+ Sbjct: 1038 KKRKKLNILIDDNIIKYICSDENNIYDINFGARSIRRALYKYIEDPIAAFLISNEYNPND 1097 Query: 730 QVTVAL 735 + + L Sbjct: 1098 TMHLTL 1103 >UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular organisms RepID=A6X7G2_OCHA4 Length = 964 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 245/821 (29%), Positives = 398/821 (48%), Gaps = 101/821 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 L+++ L A +A E + EHLLLAL S+ + LE VD+ LR+++E Sbjct: 118 LSEQGNKLLQDAAQKAGEFGRSEVDTEHLLLALTSSDVVKTILEQFKVDVDDLRRQIEKE 177 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 ++ ++ + + + + L RA G + V ++L+ + E E AA Sbjct: 178 AKRG-----DAKTDGEIGVSPRLKDALNRAFIASNELGHSYVGPEHLLIGLAEEGEGLAA 232 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 +LRK ++ + ++ K G++ E ++ F+ +L +LAR Sbjct: 233 AMLRKLGLTPQALRQQVTKVVGK---------GAEEGRVETPSNTPDLDQFSRDLTKLAR 283 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G +DP+IGR +E+E I+VL RR+KNNP+L+GE GVGKTAI EGLA RIV G+VPE + Sbjct: 284 EGKLDPVIGRAREIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPEALR 343 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTII-GAGAASGG 299 D + L+I S++AG+KYRG+FE+R + +LK++ ++ +S ILFIDE+HTI+ G Sbjct: 344 DKRLVELNINSMVAGSKYRGEFEERVQKILKEITEEKDSLILFIDEMHTIVGAGQGGGEG 403 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D AN KP L+ G++ +IG+TT E+ EKD AL RRFQ + + EP++ +T+ I+ Sbjct: 404 GLDIANTFKPALARGELNLIGATTLNEYQKYIEKDAALERRFQPVYVDEPTVAQTIMILR 463 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ E+HH V T +A+ AA EL+ +YI R +PDKAID+ID+A AR + +S + Sbjct: 464 GLRDTLESHHKVTITDEAIIAAAELSDRYITGRFMPDKAIDLIDQAAARVK---ISATAR 520 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 V+V ++E+ VA+I R + + ++ D L L+ Q + ++ L E K +A Sbjct: 521 PVDVQELEAEVAQIKREQDYAAARKQFDRAAELKKELEQK---QKE-LDELLEIWKRDQA 576 Query: 480 GLGHEHKPVGSFLFAGP-TGV-------------------------GKTEVTVQLSKALG 513 E + TGV G+ E ++ A+ Sbjct: 577 SATAEVRADHVAQIVSKITGVPVTELTTEEKDKLLKLEEKLHERVIGQEEAIRAVADAV- 635 Query: 514 IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDE-------- 565 L R + E +G P G + L + + A++ +D Sbjct: 636 -RLARAGLREGRGPTATFLFLG-PTGVGKTELAKTLAEVIFGDQDAIIRIDMSEYGERHS 693 Query: 566 --------------------IEKAHPDVFNILL----------------QVMDNGTLTDN 589 EK ++++L QV D+G LTD Sbjct: 694 VARLVGAPPGYVGYDEGGQLTEKVRRRPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDG 753 Query: 590 NGRKADFRNVVLVMTTNAGVRETERK-----SIGLIHQDNSTDAMEEIKKIFTPEFRNRL 644 GR DF N +++ T+N G +R S ++ ME ++ F PEF NR+ Sbjct: 754 KGRVVDFTNTIIIATSNLGSDIIQRNLTKRGSSEFDEAKQKSELMEVLRGHFRPEFINRI 813 Query: 645 DNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 D II F L+ I Q+V+ + ++ +GV LE+ + G+ GAR + Sbjct: 814 DEIIVFHSLNQSEIRQIVELQLNRVKRTALTQGVELELDVSVVDHFGAVGFRPEFGAREL 873 Query: 705 ARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 R+I+ L+ LA E+L G + DG +V VA +++ + + Sbjct: 874 RRLIRSQLETELAREMLSGRIEDGDKVRVAWSEDEQRVVFE 914 >UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PG59_CHIPD Length = 816 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 230/813 (28%), Positives = 372/813 (45%), Gaps = 92/813 (11%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQELEAFI 62 E++ ++ +A A A+EH H T HLLLA L L+A ++D L + E + Sbjct: 11 PEVQSAIRIAQALAKEHHHANYTPAHLLLACLHKEVGITPQLQAMNIDTYYLEEWAEVRL 70 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 + V A VLQ A + VLVAI + + Sbjct: 71 D---SVPKAGRLPEQPDADEYAANVLQEADAVRLEYDLDAADAWCVLVAISTPGVGFSFE 127 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 L+ + R +++ + D G+ + + L R+ Sbjct: 128 QLKTFPLQRAQLLSHFN----------KKDSNGAAPKTTIVTGKSVAQKYIYKLTDPQRL 177 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 L GR+ E+ +++L R+ +++ L+ GE GVGKTA+A+ LA I+Q P + Sbjct: 178 QAKHALAGRDAEVRTMMEILTRKGRSSILITGEGGVGKTALADALASAILQKQAPLQLQQ 237 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 IY+LD G+ +AG Y+ + E R + ++ QL++ +LFID +HT++ S G + Sbjct: 238 TDIYALDYGAFIAGAAYKNELEDRLQQIMSQLQEAGRHVLFIDNLHTLLDKQPGSAGGI- 296 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEK----------------DRALARR------ 340 N++K ++ G I +I ++T + F + E D A A R Sbjct: 297 -GNVLKAAMNKGDITLIATSTPEGFRKLIEPDGLLRHCFEVVQLAEPDEATAARMIQAVM 355 Query: 341 -----FQKIDITEPSIEETVQI-----------------------------------ING 360 + + + I E +++ ++ Sbjct: 356 PDYESYYNLKVAPEVISEAIKLSRRYLKERSLPDSAVNLLDRTLAAIRTTQDTGKITLDD 415 Query: 361 LKPKYEAHHDVRYTAKA-VRAAVELAVKYINDRHLPDKAIDVIDEAGARAR--------- 410 LK K EA D R + + ++ + R P + I ID A Sbjct: 416 LKAKLEAAGDSREELRWWYQQCMQRYSALVTTRLQPQQDIYKIDNEAALKTALLDIIAQL 475 Query: 411 LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 V + V D+ +++A IP + +R+ L N+ L+ V GQD A++ + Sbjct: 476 EPLVETQHVAVTGIDLATMIAESTGIPLGKIQSGERERLVNMDLELRKRVVGQDHALKTV 535 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMER 527 +EAI +R+GL +P+GSF F GPTG GKTE+ L+ L + ++RFDMSE+ E Sbjct: 536 SEAILESRSGLSRPGQPIGSFFFLGPTGTGKTELAKSLADFLFQDERCMIRFDMSEFKEE 595 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 H+ + L GAPPGYVG+++GGLL + + + P+AV+L DEIEKAHP VF+I LQ+MD G L Sbjct: 596 HSAALLYGAPPGYVGYEEGGLLVNKIRQQPYAVVLFDEIEKAHPSVFDIFLQIMDEGKLH 655 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 D G+ DF N +++ T+N G + S S ME + + F PEF RL I Sbjct: 656 DRLGKTGDFSNALILFTSNIGSDVIAQ-SFRQGVIPASQQLMEIMARNFRPEFLGRLTEI 714 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 + F + + + ++ D + L L Q+ ++L+VS AR LA +GY GARP+ V Sbjct: 715 VPFGPIQQENVVKIFDIHLKHLLQLLTQQQITLDVSVAAREKLAAEGYSPLYGARPLKEV 774 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 I+ L+KPL+ ++ GSL V + +D + Sbjct: 775 IRSRLRKPLSRMIIEGSLQPHTTVKLDIDAQGE 807 >UniRef50_Q0SNE4 ATP-dependent Clp protease, subunit A n=22 Tax=Borrelia RepID=Q0SNE4_BORAP Length = 765 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 217/749 (28%), Positives = 370/749 (49%), Gaps = 39/749 (5%) Query: 18 REHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERD 77 E +H T EH+ L+ + +E L+ C++D L + LE F + P+ + Sbjct: 19 MESKHLVFTEEHIFYGLIKSDKVKELLDLCTIDFYKLNKHLEEFFGK-LPLRNNYIPDYV 77 Query: 78 TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSR------ 131 + + ++ F+ + E ++L + ++++ L + Sbjct: 78 SSIDYLYDDIISTLFFYKKPYKIQE---KDLLWVLVKKRKNSILDALLNSGFNLTIFDKL 134 Query: 132 LDVVNFISHGTRKDEPTQSSDPGS--QPNSEEQAGG--------------------EERM 169 ++V ++++ T+ D S G NS + GG ++ + Sbjct: 135 IEVHDYLAVNTKSDSGYGSELIGEYIHNNSPKSKGGFHIFDDNRDKPDQNNIFLENKDSI 194 Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAW 229 NF TN+ A +PLIGR++EL R IQV+ R+ K+NP+L GE GVGKT + +GLA+ Sbjct: 195 GNFLTNVID-ALDLKQNPLIGRKQELSRLIQVILRKHKSNPILFGEPGVGKTVLIQGLAY 253 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHT 289 +I +VP+ + IYSLDIG L++GTKYRGD E R +L L +LFIDEIH Sbjct: 254 KIKTENVPKDLIGYEIYSLDIGRLISGTKYRGDLESRMNRVLDFLNSRKKVMLFIDEIHM 313 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 I+GAGA S G +D +NL+KP+L+ GKI+ IG+TT E+ F KD+AL RRFQ I++ EP Sbjct: 314 IVGAGATSFGSMDISNLLKPILTLGKIKFIGATTEYEYRKFFAKDKALMRRFQSIELKEP 373 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 + E+T I+ +K YE HH+V YT +A++A + ++ KYI DR LPDKA D++DE G++ Sbjct: 374 NFEDTYNILQEIKKDYERHHNVEYTDEAIQACIAMSQKYIKDRFLPDKAFDILDELGSKF 433 Query: 410 RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEA 469 +L + + + D+ ++ I + + + + L NL +R+K D + Sbjct: 434 KLENIKRI---ITKDDVCDLIKSIVGSNIFNFEEYNSELLINLENRIKKEFIIHDSLVFD 490 Query: 470 LTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHT 529 L IK+ + L +G F F G +G K ++T LS+ I +M EY + + Sbjct: 491 LILNIKLLKFNLLANRSTIGIFAFIGASGAEKCKLTDILSEEFKIPKFNLNMGEYSDFTS 550 Query: 530 VSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDN 589 + RLIG G+ + + K ++++ L + +K + V + L+ G L D Sbjct: 551 LDRLIGPVLSNDGYYESTRFFKFLNKSSNSIIFLSDFDKCNKRVLDFFLEGFRTGKLFDG 610 Query: 590 NGRKADFRNVVLVMTTNAGVRETERKSIGLIH-QDNSTDAMEEIKKIFTPEFRNRLDNII 648 G+K ++V++ NA E SIG + D ++K F EF +D + Sbjct: 611 LGKKVSLSESLIVISVNAESNEL--NSIGFKNKMAGENDFDLILEKRFPNEFLELIDYVF 668 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F + +++ + L + + + +++ EK + G + + + I Sbjct: 669 VFKSIDELDFEKIIFNELNRFARMLRDRKFDVFFEKSVVDYIREKISGKGYGLKSVKKFI 728 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDK 737 + K L +E+LF + + G++ + LDK Sbjct: 729 FKEVGKLLIDEILFKKIENSGKIKIYLDK 757 >UniRef50_C2EIG8 ATP-dependent Clp protease n=4 Tax=Lactobacillales RepID=C2EIG8_9LACO Length = 636 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 231/610 (37%), Positives = 370/610 (60%), Gaps = 39/610 (6%) Query: 159 SEEQAGGEERMENFTTNLNQLARVGGID-PLIGREKELERAIQVLCRRRKNNPLLVGESG 217 + E + ++ +TTNL+ A+ D + GREKE+E I L R+ KN+PLL+GE+G Sbjct: 26 NNETSFPTPYLDQYTTNLSIKAQSRPDDYEVYGREKEIEDIIISLMRKTKNSPLLIGEAG 85 Query: 218 VGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQ 276 VGKTAI EG+A RI++ VPE + D T+ SL++ SL++ T G F +FKA++++L Sbjct: 86 VGKTAIVEGVALRIIRNQVPESLQDLTVRSLELSSLMSDT-VEGSFLAKFKAIIEELVAT 144 Query: 277 DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 ++LFIDEIHT++GAGA +G +DA N++KP L+ G+I++IG+TT E+ E DRA Sbjct: 145 KGENLLFIDEIHTLMGAGA-NGQALDAGNVLKPALARGEIQMIGATTIDEYHETIENDRA 203 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L RRFQ I I EP+ E+ + I+ G+ P +E H V+ A++AA+ L+V+YI DR LPD Sbjct: 204 LQRRFQNIQIDEPTKEQALVILQGVTPSFENFHQVKIKESALKAAINLSVRYIPDRFLPD 263 Query: 397 KAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL 456 KA+D++DEA + S+ V+ +I V+ R IP ++ +++ D LKN+ RL Sbjct: 264 KALDLLDEAS----TIASSQNSTNVSEVEIAEVLKRRTGIPVTTILRAEEDRLKNIESRL 319 Query: 457 KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE- 515 V GQ+ A++ +++A+ ++RAGL E KP+G+FLF G TGVGKTE+ L++ + + Sbjct: 320 SKRVKGQEFAVKEVSDAVTISRAGLQDETKPLGTFLFLGTTGVGKTELAKSLAEVVFDDE 379 Query: 516 --LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV 573 ++R DMSE+ + + +LIG G+LT+AV P++++L DE+EKA +V Sbjct: 380 NAMIRLDMSEFSQPGSSLKLIGT------RKTKGVLTEAVKHRPYSIVLFDELEKADREV 433 Query: 574 FNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK--------SIGLIHQDNS 625 ++LLQ++D+G LTD GR F+N +++MTTN G + + ++ L + Sbjct: 434 HDLLLQILDDGRLTDGTGRLISFKNTIVIMTTNIGADKIKLNEELKGDIENLSLREYNQF 493 Query: 626 TDAME-EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQ 684 ++M+ E++ F PEF NR+D+ + F L +VI ++ K + L ++ ++ L ++ Sbjct: 494 IESMDIELQTEFRPEFINRIDHKVVFKMLGEEVIREIAIKDLEILDQRMQKQKAKLVYNE 553 Query: 685 EARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 E ++LA G D GARP+ R+I + P++ +LL L K KN + Y Sbjct: 554 ELLDYLAFNGTDVNNGARPLMRLINRKVLAPISRKLL------------TLPKRKN-VEY 600 Query: 745 GFQSAQKHKA 754 F+ K KA Sbjct: 601 IFKVVVKGKA 610 >UniRef50_C3RJA5 ATPase n=3 Tax=Bacteria RepID=C3RJA5_9MOLU Length = 665 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 218/716 (30%), Positives = 375/716 (52%), Gaps = 62/716 (8%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 +++ + ++ + + A + H + EHLLL+LL + RE ++ VD + ++++ Sbjct: 5 FDEQAQKAIVVGESIAFDLGHNNVGSEHLLLSLLKISDSKLRELVKKYDVDDKNIYEDIK 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ + + + + +L+ A+ +++VT + +A+ +ES Sbjct: 65 RLFGTN------DDQPFYMEYSDAVKSILEAAMEITNQQNKSKVTLNILTIALLQSEESV 118 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A LL+K++V +++ ++ + + NLN+ Sbjct: 119 AHELLKKYKVDFEEIIYQLNESSELETKLDQIQS-------------------LVNLNKK 159 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 + G ++GR+KELE+ +L ++ KNN L++GE+GVGK+A+ E LA+ I Q V E Sbjct: 160 VKQGE-HLIVGRQKELEKLCMILSKKEKNNALIIGEAGVGKSALVEKLAYLINQKQVNEG 218 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + IY L + S++AGTKYRG+FE++ + ++ ++++ N I+FIDEIH IIGAG A G Sbjct: 219 LKKKIIYELSLSSIVAGTKYRGEFEEKLRKIIDKVKEMDNVIIFIDEIHNIIGAGGAEGA 278 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ + +IG+TT +E+ FEKD+A+ RRF I + E + EET++I+ Sbjct: 279 -IDAANILKPYLARKDLTIIGATTTEEYFQHFEKDQAMNRRFSVITLKENTKEETLEILQ 337 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 K YE H + + + V+ +YI +R PDKAID+ D A +AR K Sbjct: 338 KTKLFYEQFHQIEVDNEVLTYLVDNVDRYIKNRTFPDKAIDIFDLACVKARFKQQHIITK 397 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 + IE + V S+ + +L + GQ KAIE + +K+ + Sbjct: 398 QIVKDVIEEYTS---------VKISEDYDYDEIKAKLNHHIIGQSKAIEQIINQLKLTK- 447 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPG 539 +P LF G +GVGK+E QLSK LG +L+R DMSEY + +V ++IGA PG Sbjct: 448 ---QSKQPSAVMLFVGNSGVGKSESAKQLSKLLGRKLIRLDMSEYRDSSSVQKIIGAAPG 504 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+D+ LL + +P +++LLDEI+KA DV N+ LQV D G L D++ RK F N Sbjct: 505 YVGYDKPSLLLGQLQTYPKSIILLDEIDKASQDVINLFLQVFDEGYLEDSHKRKVYFNNT 564 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 +++MT+N G T + ++G ++S+ +K F+ E +R+D II F +L+ + Sbjct: 565 IIIMTSNKG---TAKNTLGFKKNNHSSK----VKNFFSDELLSRIDEIINFKNLTKMDLK 617 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 +++ K EV +E + ++ YD + R + + + Sbjct: 618 KIIRKNCPH------------EVKEEDIELILKE-YDMKLQGRGIVKAANKYFQNK 660 >UniRef50_B5RQH1 ATP-dependent Clp protease, subunit C n=24 Tax=Borrelia RepID=B5RQH1_BORRA Length = 744 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 216/719 (30%), Positives = 382/719 (53%), Gaps = 19/719 (2%) Query: 15 ARAREHRHEFMTVEHLLLA-LLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASE 73 AR++++ ++ HLL++ LL +P E + L ++Q+ IE+ VL + Sbjct: 10 EVARKNKNREVSSWHLLMSILLIHPKKSEIKNIETKTLKNIKQDTLYEIEKLEKVLIGTN 69 Query: 74 EERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLD 133 E + + ++ + +S + + + I ++ Y L K + + Sbjct: 70 EIVIPKISREIFTLIDQTKKEFKS--KTLIGIKEIFYQILKTKKLLKKYKLNKLSFNFDE 127 Query: 134 VVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREK 193 + I K ++ E + + + NL LA+ +DPLIGREK Sbjct: 128 --DNIITSIDKIRLIETYKEFE---DETRQNDYFEINKYVKNLTTLAKEKKLDPLIGREK 182 Query: 194 ELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 E++ I +L RR KN+ +L+GE G+GKTAI EGLA +I ++ + + I ++ L Sbjct: 183 EIQSLISILERRNKNSTILIGEPGIGKTAIVEGLAIKIANKEIKSQLQNKIILQIETSDL 242 Query: 254 LAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS 313 ++GTKYRG+FE+R ++K ++ + N I+FIDEIHT+IGAG + G +DAAN++KP+LS Sbjct: 243 VSGTKYRGEFEERLNNIIKSIKNNKNIIIFIDEIHTLIGAGNSE-GSIDAANILKPILSR 301 Query: 314 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 I++IG+TTY E+ KD+A RRFQ I I EP +ET+ IIN + +E +H V Y Sbjct: 302 SAIQIIGATTYDEYRKHISKDKAFTRRFQTISIKEPDEKETLNIINSIIKNFENYHGVTY 361 Query: 374 TAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 433 +A+ + L+ +Y+ +R PDKAID+ID AGA+ + ++ + VN D+++ Sbjct: 362 EKEAIENVISLSSQYLTNRKFPDKAIDLIDIAGAQKKQQEINTKI--VNAEDVKNTTDEF 419 Query: 434 ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLF 493 I K + LK +K + GQ+ AI+ + + + G+ + +P+ S L Sbjct: 420 FGIKVKLSLTEEIAYLKEETINIKEKIIGQESAIDEIIIEMVKTKLGINNNIQPLTSILL 479 Query: 494 AGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLT 550 G +G GKT ++ +SK + + +L+ DMS+Y E ++S+LIG PGY G+ GG+L Sbjct: 480 IGSSGSGKTILSKTISKIMIKDQNSILQLDMSDYREETSISKLIGTNPGYAGYTDGGILI 539 Query: 551 DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR 610 + + +P A ++ + IE AH V +I+ Q+++NG L DN K F+N ++V++T+ G + Sbjct: 540 NRLKYNPRAFIIFENIEYAHNSVMSIIEQILENGELIDNTEDKISFKNSIIVLSTSIGSK 599 Query: 611 -ETERKSIGLIHQDNSTDAM----EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKF 665 + +G DN+ D E+K F +++ I + L+ + + D + Sbjct: 600 ILLGKGILGFNKTDNNIDIKSTINNELKTKFKLSLIDKIQKKIILNVLTEKDLSIIYDNY 659 Query: 666 IVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 EL + K + +E+ +N + +K YD+ GAR + +++N+++ + N++ Sbjct: 660 CKELTQKFSLKNIQIEIDDSLKNHIIKKYYDKNSGARSILNAVKENIEEKIINQIFHNP 718 >UniRef50_A3CKB2 ATPase with chaperone activity, ATP-binding subunit, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CKB2_STRSV Length = 638 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 222/595 (37%), Positives = 354/595 (59%), Gaps = 31/595 (5%) Query: 160 EEQAGGEERMENFTTNLNQLARVGGID--PLIGREKELERAIQVLCRRRKNNPLLVGESG 217 EE+ ++ +T N+ + ID + GR+KE+E+ I L R+ KN+P+LVGE+G Sbjct: 31 EEEESLTPYLDKYTENVTEK-IRKKIDNFTVFGRDKEVEQVIVSLLRQTKNSPILVGEAG 89 Query: 218 VGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGD-FEKRFKALLKQLE- 275 GKTAI +GL I++G+VP+ T+ SL++ ++ +K G+ R K ++++L+ Sbjct: 90 TGKTAIVDGLVVEILKGNVPDEFKHVTVRSLELSNI--SSKSDGEDMVSRLKRIIEELKV 147 Query: 276 QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDR 335 +ILFIDE+HTI+GAG G +DA N+IKP L+ G+I++I +TTY+E+ + E D+ Sbjct: 148 TKGENILFIDEVHTIVGAGG-DGSMLDAGNVIKPPLARGEIQMISATTYEEYQSSIETDK 206 Query: 336 ALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLP 395 AL RR Q + + EP+ ++ + I+ ++ ++E ++ T AV AV LAV+YI +R LP Sbjct: 207 ALERRVQMVPVEEPTEDQAIFILGNIRRRFEKERNITITDDAVEQAVRLAVRYIPERFLP 266 Query: 396 DKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 DKAID++D+A A+A +++K V++ DI V+ ++ +IP ++ + D + L N D Sbjct: 267 DKAIDLLDDATAQAYF----EKRKVVDIEDIARVIQKMKKIPVTTILKDDSERLMNFTDE 322 Query: 456 LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE 515 LK V GQD A+ + I +++ G +KP+GSFLF G TGVGKTE+ L+K L Sbjct: 323 LKKYVKGQDFAVSQVANTIYISKEGFQRPNKPLGSFLFLGTTGVGKTELAKALAKILFDN 382 Query: 516 ---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 ++R D SEY + +LIG VG GLLT+ V +P++V+LLDE+EKAHPD Sbjct: 383 VDAMIRIDCSEYSSKGDKDKLIGKNI--VGSK--GLLTEPVKNNPYSVVLLDELEKAHPD 438 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD----- 627 +++ILLQV+D G LT GRK +F+N +++ TTN+G E ++ + TD Sbjct: 439 IYDILLQVLDEGHLTTGTGRKINFKNTIVIATTNSGADEIKKTYANEGNFGEMTDLAYEG 498 Query: 628 ----AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS 683 +EE+ F PEF NR N + F+ L+ D+I +VD + + +L ++ V L+ Sbjct: 499 FMNRIVEELSLTFRPEFINRFGNKVVFNMLTADIIEAIVDLAWKKEEKRLAEQKVYLQYE 558 Query: 684 QEA--RNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 +A ++L KG GARP+ R+IQD + P+A +L G + V + Sbjct: 559 DKAEFYDFLRSKGTSVENGARPLERLIQDRVTGPIAEKLFLLQ-RRGAKYNVLIK 612 >UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two ATP-bindingdomains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FU98_SORC5 Length = 945 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 213/601 (35%), Positives = 326/601 (54%), Gaps = 47/601 (7%) Query: 167 ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 + + NL+ A G ++P++GRE E+E+A+ VL +R NNP L+G +GVGKT++A G Sbjct: 325 PALASLGHNLSLAAVQGELEPIVGREHEIEQALDVLAKRHANNPCLLGPAGVGKTSVARG 384 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN-SILFID 285 +A R+ + + L LLAGT RG +R AL ++ + ILFID Sbjct: 385 VAHRLAFDEREP----RVVVELVPSELLAGTGARGALSERLSALRSEVREAGGRVILFID 440 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 + + G+GA + IK L+ G++ +IG+ T +E+ E D ALARRF ++ Sbjct: 441 GLSELFGSGALDEAMAE----IKLALARGELTMIGTATPEEYRKSIEVDPALARRFTIVE 496 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 I EP +E ++ + AHH + +T +A+ +AV +V+Y+ R LPDKA+ ++D A Sbjct: 497 IDEPEEDEAFLLLQSVAVGLGAHHGLAFTDEALASAVAWSVRYLPGRALPDKALSILDLA 556 Query: 406 G----------------------ARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQ 443 G A A L ++ + V A++ VV+ +A +P + + + Sbjct: 557 GARTRRRASSASRASRASRTSHAAHAALHEPAQPARQVGPAEVAEVVSELADLPVERLLE 616 Query: 444 SDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTE 503 +DR+ + +L L V G +A+ + ++ AGL +P+GSFL GPTGVGKTE Sbjct: 617 TDRERMLSLETLLAENVVGHGEALSRIARVLRRNAAGL-RARRPIGSFLLLGPTGVGKTE 675 Query: 504 VTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAV 560 +++AL + R D SEY E H V+RL+GAPPGYVG + GG LT+AV + P+ V Sbjct: 676 TAKAIAEALFHSPDAMTRLDFSEYAESHAVARLVGAPPGYVGHEAGGQLTEAVRRRPYQV 735 Query: 561 LLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET----ERKS 616 +LLDEIEKAH DV LQV D G LTD GR+ DF N VLVMT+N G E +S Sbjct: 736 VLLDEIEKAHRDVLEAFLQVFDEGRLTDGRGRRVDFTNTVLVMTSNLGAAEAGALRSERS 795 Query: 617 IGLIHQDNS-------TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 +G ++ + + PE NR+D ++ F L+ + ++ + + L Sbjct: 796 VGFARSSSAVSPERLGETMLSAARAALPPELYNRIDEVLCFAPLTRADVAEITRRLLGGL 855 Query: 670 QVQLDQKGVSLEVSQEARNWLAEK-GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 + +L+ +GV LEV EA + L + G+D +GARPM R I ++ PLA +L G L +G Sbjct: 856 ERELEARGVELEVEPEAIDALLDAGGFDPELGARPMKRTIARLVEAPLAELILRGQLEEG 915 Query: 729 G 729 Sbjct: 916 S 916 >UniRef50_C0SQM4 Putative ATP-dependent Clp protease n=1 Tax=Lactobacillus brevis RepID=C0SQM4_LACBR Length = 597 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 202/581 (34%), Positives = 324/581 (55%), Gaps = 26/581 (4%) Query: 166 EERMENFTTNLNQLARVG-GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 + +E + T+L +L + IGREKE+E + L R+RK+NPLL+GE GVGKTAI Sbjct: 2 NQLIEKYATDLTRLVQNDLEGYQAIGREKEIEELLVTLARKRKHNPLLIGEPGVGKTAIV 61 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK-YRGDFEKRFKALLKQLEQDTNSILF 283 EGLA +IV +VPE + I+ +++ L+ G + + G F A+ N ++F Sbjct: 62 EGLAKKIVLQEVPERLQSAHIWVIELAGLMNGERPFLGLFRDLIMAISHDC---PNDLIF 118 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDE+HTI+GAGA+ +DA N++KP L+ G I++IG+TT +EF + E D AL RRF+ Sbjct: 119 IDELHTIVGAGASGKQGLDAGNVLKPALARGDIQLIGATTIEEFHDYIEADGALTRRFEV 178 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + + EP E T +I+ GL+ Y+ +H V+ T A+ V LA +YI DR +PDKA+D++D Sbjct: 179 LQVAEPDTETTKKILYGLRLSYQTYHYVKITDDALNQIVTLANRYIPDRFMPDKALDILD 238 Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 E+ A R ++ V + V+ R IP S+ + ++ + + ++ V GQ Sbjct: 239 ESCADTRQRQLT----EVTRERVAQVLERRTGIPMTSILRDRTQRIERITEIIQRRVKGQ 294 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFD 520 D A+ +++++ ++ AGL E +P+ SFLF G G GKTE+ LS+AL + ++R D Sbjct: 295 DAAVREVSDSVAVSFAGLEDERRPISSFLFLGTPGTGKTEMAKALSEALFDDEEAMIRLD 354 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MSE+ E ++ RLIG D+ G+LT+ V P+AV+LLDEIEK V ++ LQ+ Sbjct: 355 MSEFAEENSAQRLIGTA------DKRGILTEQVKHQPYAVVLLDEIEKGDRSVQDLFLQI 408 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-------EEIK 633 + +G + D+ GR F+N +++MTTN ++ D A+ + Sbjct: 409 LSDGIVHDHYGRPISFKNTIIIMTTNLAGAVINDEAEYNSASDTDQKALAFEGNVENALH 468 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEK 693 F PEF NR+++ + F L+ V+ ++ K++ EL +L +G +LA+ Sbjct: 469 NYFRPEFVNRIEHKVVFQMLTESVVEKIARKYLQELTNKLAVRGYRFTYDDLVPKFLADV 528 Query: 694 GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 G++ GARP+A + + PLA LL G + Sbjct: 529 GFNLKNGARPLAYMTHRKVTAPLARILLRLE-QTGNTKQIT 568 >UniRef50_Q1WR72 ATP-dependent Clp protease n=2 Tax=Lactobacillus salivarius RepID=Q1WR72_LACS1 Length = 606 Score = 488 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 213/580 (36%), Positives = 333/580 (57%), Gaps = 44/580 (7%) Query: 165 GEERMENFTTNLNQLARVGGID-PLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 + +T NL AR D +IGR+KE+ + I L R+ KNNP+L+GE+GVGKTAI Sbjct: 6 QTPSLSKYTINLTANARNNPDDYKVIGRDKEIVQVIFNLSRKTKNNPILLGEAGVGKTAI 65 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSIL 282 +GLA I V E + + I L I +L + D ++ ++K+ +Q +IL Sbjct: 66 VDGLARLIALNQVGEKLKNKQIRVLQIAAL-----GQQDVVRKMLNIIKECKQTKGRTIL 120 Query: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342 FIDEIHTI+GA S G +D +++KP ++ G+I++IG+TT+ E+ EKD AL RRFQ Sbjct: 121 FIDEIHTIMGA-DTSNGAMDLGDVLKPAMARGEIQLIGATTFDEYDKFIEKDPALERRFQ 179 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI 402 +I + EPS ++ V+++ G++ YE H + YT +AV A V+L+++YI DR LPDKAID++ Sbjct: 180 QILVNEPSRDDAVKVLFGIRDNYEKFHHLVYTDEAVEACVDLSLRYIGDRQLPDKAIDLL 239 Query: 403 DEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG 462 D+AG+ A +K ++ ++V DI V+ + IP ++ ++D LKNL +L +V G Sbjct: 240 DQAGSIA----ATKGQEIIDVKDIALVLQDMKGIPVTNILKNDSSRLKNLDKKLAKVVKG 295 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRF 519 Q +AI+ +T+A+ +A+AGL KP+ SFLF G TGVGKT +T+ +++ + L+R Sbjct: 296 QAEAIKTVTDAVTIAKAGLQDPTKPISSFLFLGTTGVGKTALTLAMTEVMFDSTDNLIRI 355 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DMSE+ ER ++ R LLT V + P+ ++LLDEIEKA V + LLQ Sbjct: 356 DMSEFSERESLDRF------------QDLLTMQVKRKPYCIILLDEIEKACTAVHDRLLQ 403 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN--------------- 624 V+D G L D GR F+N +++MTTN G I + Sbjct: 404 VLDAGILRDKRGRSTSFKNTIIIMTTNLGAELIVDNQIYEANTAEKFLNLTPNEIARKQD 463 Query: 625 --STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV 682 + E+ IF PEF NR+++ + F+ L+ D+I Q+ + L ++ G L Sbjct: 464 AFKKEVNMELTNIFRPEFVNRIEHKVIFNMLTRDIIKQIAYNNLATLSQRMAVHGFKLVY 523 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 + ++LA+ G D GARP+AR I++ + P+A ++ Sbjct: 524 EDDLIDYLADIGTDVLNGARPLARCIEEEVSAPIAMYIMK 563 >UniRef50_B5RLQ8 ATP-dependent Clp protease, subunit A n=1 Tax=Borrelia duttonii Ly RepID=B5RLQ8_BORDL Length = 769 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 210/750 (28%), Positives = 376/750 (50%), Gaps = 43/750 (5%) Query: 18 REHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERD 77 E +H F T EH+ +L+S+ RE L C++D + + LE F + P+ A + Sbjct: 26 VERKHLFFTEEHIFYSLISDDEIRELLSLCALDFYSFNKILEEFFTK-LPIRNADFYDYF 84 Query: 78 TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNF 137 + +Q ++ ++ + E ++L + ++++ L K S LD+ + Sbjct: 85 FKINDLYQEIIDTIFYYKKPYVLQE---KDLLWVLIRKRKNTILDALLKSGFS-LDIFDK 140 Query: 138 ISH-----------GTRKDEPTQSSDPGSQP------------------NSEEQAGGEER 168 I G K+E ++D ++ ++ Sbjct: 141 IMEIYDYLGSNLDLGFLKNEKLLTNDLFNKGIDKYGGLNIFEEDYFKLEQDDDSLDENNL 200 Query: 169 MENFTTN-LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGL 227 +++F N ++ L +PLIGR+KEL IQ++ R+ K+NP++ GE GVGKT + +GL Sbjct: 201 VDDFLVNVIDNLDPNLATNPLIGRKKELYTLIQIMLRKHKSNPIVFGEPGVGKTILLQGL 260 Query: 228 AWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEI 287 A+ I +G VP + DC +YSLDIG L++GT+YRGD E R LL L ILFIDEI Sbjct: 261 AYIIREGQVPHELIDCEVYSLDIGRLISGTRYRGDLENRVNKLLDFLHFKKKVILFIDEI 320 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 H I+GAGA S +D +NL+KP+L+ GKI+ IG+TT E+ F KD+AL RRF +++ Sbjct: 321 HMIVGAGATSFSNIDVSNLLKPILTLGKIKFIGATTKNEYKKFFLKDKALLRRFHGVELK 380 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS+E+T I+ G K +YE HH V YT +A+ A+ ++ KYI DR LPDKA D++D G+ Sbjct: 381 EPSLEDTYHILKGAKEQYEKHHHVEYTDEAIWVAITMS-KYIKDRALPDKAFDLLDGLGS 439 Query: 408 RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 + + + KK + D+ V + + D+D L NL +++ + + + Sbjct: 440 KFK---LEGNKKVITGDDVRDFVKYMVGTSIFNFDDYDQDLLMNLEHKIRTSMIIDESIL 496 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMER 527 L IK+ R ++ +G F+ G + V K ++ LS+ L + L MSEY + Sbjct: 497 SELLLHIKLLRIKFFFKNSTLGIFILIGSSDVDKNKLACVLSEELNMPKLTLGMSEYCDF 556 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 ++RLIG G +D+ + + +++++L + +K+ V + + + G L Sbjct: 557 DGINRLIGPVYGSEAYDEPTKFFRFLNESLNSIIVLSDFDKSSKRVIDFFFEGFNTGRLF 616 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 DN GR ++++ N RE + G+ ++ + D ++K F+ +F + +D++ Sbjct: 617 DNFGRSVSLSGSIIIIDINIEYRELD----GIGFKNETVDIRSLLEKRFSNKFLDLVDHV 672 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 +F +S +V+ + + L + + L + + + Y+ +G R + ++ Sbjct: 673 FFFRPVSKSDFKRVIIEEVNNFVKILKNEKIDLFFEEAVIGYFQKHIYENGLGIRGIRKI 732 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDK 737 + + L ++L+ + ++ + LD Sbjct: 733 VIKEIGSLLIDDLILKKFKENDKIRIFLDD 762 >UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F0302 RepID=D1QW31_9BACT Length = 815 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 215/823 (26%), Positives = 363/823 (44%), Gaps = 104/823 (12%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQELEAF 61 + L ++ +A A AR+ +H V HL A+++ + RE L + D+ + + Sbjct: 7 STSLLAAIKLAKAMARQDKHHSYGVAHLATAMMTEQTGLREILTSMQKDVAYIMDWFDTH 66 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 E + E D + VL A G + V V AI + + Sbjct: 67 KEMYIS---SGNEASDIIADGEVKLVLDEAERSKIKLGTDYVDALCVFTAIVRDGVVYSH 123 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 + VS D++++ + G P + P+S + ++L + Sbjct: 124 QQIEGLGVSEEDILDYFNAGAS---PFSIGEEQEMPSSI----------QYASDLKRPEI 170 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 + +IGR KE+ ++ L R LLVG G+GKTAI + LA + E++ Sbjct: 171 LEEGKTIIGRSKEVRLILENLERAENKAVLLVGAPGIGKTAIVKALAHEVASNK-DELIN 229 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASGGQ 300 + +L+ +LA T + ++ ALL++L T ++L ID++ ++ G S Sbjct: 230 QTALVNLNTPKILAQTSSEAEVGQKITALLQKLNPSKTKAVLVIDDLQMLLENGNTSNAT 289 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT--EPSI------- 351 N++ +S G + ++ + + EK + R I++ EP+I Sbjct: 290 -SLINILDAQISEGTVTLVMLLSTDAYRKHIEKHP-IVNRLNVINVEQLEPNILKSALLG 347 Query: 352 --------------EETVQIINGLKPKY--EAHHDVRYTA--------------KAVRAA 381 EE + L +Y E A Sbjct: 348 HKTQLQAHYSLAVTEEAIDSACSLANRYYKEKSQPASTLDLLDSTAASVRLSNKNAQETI 407 Query: 382 VELAVKYINDRHLP-------------------------------------DKAIDVIDE 404 +L Y P D +++ Sbjct: 408 TQLTETYQKYCKQPIEEVKDRDLHLLYHTIFSKISVVLISKIVDNFILTDEDTTQQKLEK 467 Query: 405 AGARARLMPV--SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG 462 G + + +K + V+ ++E+VVA IP + ++D L + +L V G Sbjct: 468 IGLILKELAEVSAKGMQAVSPLEVEAVVAGDTGIPIGKIQAQEKDRLLGIETKLCERVKG 527 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRF 519 Q+KAI L +AI +R+GL KP+GSF F GPTG GKTE+T L++ L + ++RF Sbjct: 528 QNKAITTLADAIIESRSGLSDPKKPIGSFFFLGPTGTGKTELTKSLAELLFDDDSAMIRF 587 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DMSE+ E H+ + L GAPPGYVG+++GGLL + + P++V+L DEIEKAH V+++ LQ Sbjct: 588 DMSEFKEEHSAALLYGAPPGYVGYEEGGLLVTKIRQKPYSVVLFDEIEKAHSSVYDVFLQ 647 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPE 639 +MD G + D GR+ DF N +++ T+N G + ++ I HQ S + +E + K F PE Sbjct: 648 MMDEGKIHDKLGREGDFSNSIIIFTSNIGSQWIAQQ-IQEGHQPKSNELIEVMSKYFRPE 706 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNWLAEKGYDRA 698 F RL I+ F ++ V ++ LQ Q LDQK + ++++ E ++L EKGY Sbjct: 707 FLGRLTEIVPFSPITESVAQEIFMLQFSRLQKQLLDQKNIQVDLAPETISYLTEKGYSPQ 766 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNE 741 GARP+A VI+ LKK ++ ++ ++ G +V V + + Sbjct: 767 YGARPIAGVIRTYLKKTISKLIVSETIKQGDKVCVNYHEGNLQ 809 >UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=D2QJP1_9SPHI Length = 828 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 211/831 (25%), Positives = 369/831 (44%), Gaps = 95/831 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQELEA 60 L + +E +L++A A ARE+ +E +T HLL A+L + L A D+ + + Sbjct: 6 LTEPVEKALHIARALAREYHNEQLTAAHLLRAVLHDDVGGSALLRALDQDVAYIFDWADV 65 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +IE+ ++ + S +RVL A F G + V VL A+ Sbjct: 66 WIEEQP---RSALAITEPLQDESVERVLNEADFFRVKLGLDYVELICVLTALTKPGVGFT 122 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A LR + D+++ T + + + + + A Sbjct: 123 AEQLRSFPLQERDLLDRFLRDLSTPRATDKTSSNGNGQAALPGLKTKGQFPYCIDKTAQA 182 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R +DP++GR++E+ +++L RR K N ++VG+ GVGK+A+ +GLA IV+G VP M Sbjct: 183 RAKKLDPVVGRKQEVRTMLEILGRRSKPNVMVVGDPGVGKSALLDGLAQLIVEGQVPARM 242 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + + LD G+LLAG Y+G+ E R K++LK++ Q ILFIDEIHT++ ++G Sbjct: 243 KNAILLELDSGALLAGASYKGEVEDRLKSVLKEVRQQEMCILFIDEIHTLLDPKGSAGNG 302 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 + ANL+KP L+ G++ V+G+TT +E+ + E D+AL+RRF+ +++TEP+ + ++I G Sbjct: 303 I--ANLLKPELARGELTVVGATTLEEYRKLIEPDQALSRRFELLNVTEPTEQVAERMIRG 360 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 L P YE HH + V A + LA +Y +R LPD A+D++D A R+ + + Sbjct: 361 LIPVYEQHHKLEIQPDVVAACIRLARRYSKERRLPDSALDLLDRTMAAIRIAIETSETEL 420 Query: 421 VNVADIESVVARIARIPEKSVSQSD------------------RDTLKNLG--------- 453 + +++ P +++ + DT+ L Sbjct: 421 TQLEKAVQELSQSDLPPGEALDEYRWIDTQLHHQISPVLLGNWEDTINPLEIETPAAYHD 480 Query: 454 ---DRLK--MLVFGQD---------KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGV 499 +L+ + GQ A+ A I M + + + + F V Sbjct: 481 YIMAKLRRFRELAGQQVPVVTANDLVAVVAHKTGIPMGKVQGQEKERLLSMESFLQRRVV 540 Query: 500 GKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHA 559 G+ LS A+ R + + L+G P G + L D + A Sbjct: 541 GQNHALRALSDAILES--RSGLQRAGQPIGSFFLLG-PTGTGKTELSKSLADFLFNDERA 597 Query: 560 VLLLDE----------------------------IEKAHPDVFNILL------------- 578 ++ D + K ++++L Sbjct: 598 LIRFDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRKQPYSVVLFDEIEKAHGSVFD 657 Query: 579 ---QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKI 635 Q+MD G L D G++ DF N +L+ T+N E S M + Sbjct: 658 VFLQIMDEGRLHDKLGKEGDFTNALLIFTSNISS-EWITNEFQAGRMPTSQQLMTRMTGQ 716 Query: 636 FTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGY 695 F PEF R+ II F + + + ++ + + LQ L Q+GV+L +++EA LA +G+ Sbjct: 717 FRPEFLARITEIIPFSPIQEENVVRIFEIQLAHLQKSLVQQGVTLTLTKEANRQLALQGF 776 Query: 696 DRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 GARP+A +I++ L++P++ L+ G L G + + +++ +EL + Sbjct: 777 SPHYGARPLAGIIRNQLRRPISRLLISGQLQKGQSLNLDWNEQTSELIWQI 827 >UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococcus warneri L37603 RepID=C4W7H5_STAWA Length = 882 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 210/770 (27%), Positives = 354/770 (45%), Gaps = 111/770 (14%) Query: 73 EEERDTQPTLSFQRVLQRAVFHVQSSGRNE-VTGANVLVAIFSEQESQAAYLLRKHEV-- 129 + D + + + ++ A + + + +L+ + +++ A ++L K + Sbjct: 128 KYMNDYPISNNVKESIEFAEEMRFQNNPSGGIDTYWILMGMVQDEKCNAYHILMKLMLKF 187 Query: 130 --------------SRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 +R + N G + E + ++ +E+ + N Sbjct: 188 DFVYDGDKLTDRFQNRGYLANSFYDGKNEKEQQLDLAKQKRITNKLYNPNYSLLEDISIN 247 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 + AR I P+I REKE+ L RR KNN L+G+ GVGK+AI EGLA +IV + Sbjct: 248 ITDKARNEEILPVINREKEIHHLEIALSRRDKNNVALIGKGGVGKSAIVEGLALKIVNKE 307 Query: 236 VPEVMADCTIYSLDIGSLLA---GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIG 292 +P + + I + L++ G +RG + + +++ + + ILF+DEIH + Sbjct: 308 IP-SLINKKILQFSMNDLISVIQGDTFRG-----IQRFMSEMKSEKDVILFVDEIHML-- 359 Query: 293 AGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIE 352 G G +++KP ++ R+IG+TT E+ N D AL RRF+ ++I EP++E Sbjct: 360 -GKYKG----ITDILKPAMARNDFRIIGATTPSEWQNYISSDIALTRRFEIVNINEPTVE 414 Query: 353 ETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLP----------------- 395 +T++IIN YE H V + + + AV+L KY LP Sbjct: 415 DTIEIINEAISVYENFHQVNFEEETIELAVKLGKKYFQKEQLPDLAFTILDNAGAICRIE 474 Query: 396 -------------------------------DKAIDVIDEAGARA-RLMPVSKRKKTVNV 423 D+ ID I + + + + V Sbjct: 475 RGQFTNIQLNYEDKMNDLKLTLKQAQSIEFNDQQIDEIRKEIKQLEKEYARNITSSKKMV 534 Query: 424 ADIESVVARIARIPEKSVSQS---------------DRDTLKNLGDRLKMLVFGQDKAIE 468 I I + E+ + +S + + L++L +K + GQD AI Sbjct: 535 FPINVTKEHIKKAIEQKLGESIDGLEFQGDEQFSDIELNRLRSLKAVMKSQIIGQDDAIN 594 Query: 469 ALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYM 525 + A+ + G + PVG F+ G TGVGKTE L++ L + ++RFDMSEY Sbjct: 595 TIANAVIRKKLGFKQHNHPVGVFMLLGTTGVGKTETAKILNRTLYKDESNIIRFDMSEYQ 654 Query: 526 ERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGT 585 + H VS+LIG PPGYVG+ + G L V++HP+AV+L DE+EKAHP +F+ILLQV D+ Sbjct: 655 KDHEVSKLIGPPPGYVGYGRDGDLVKTVLEHPNAVILFDEVEKAHPKIFDILLQVFDDAR 714 Query: 586 LTDNNGRKADFRNVVLVMTTNAGVRET-ERKSIGLIHQDN--------STDAMEEIKKIF 636 LT++ G A+F ++++T+N G + +K IGL Q+N + F Sbjct: 715 LTNSLGEVANFSECIILLTSNIGTSDIRHKKVIGLNQQNNDETDFVTVDESIKNALNNYF 774 Query: 637 TPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYD 696 PEF NR+D I F L I ++ + + + + ++ G ++E S A +A+ Y+ Sbjct: 775 RPEFLNRIDEFITFKPLDQQEIFEITNLLLEKEKTLVESLGYNIEFSSSAMRLIAKLCYE 834 Query: 697 RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 GARP+ R I L+ L++E++ G+L G + V + EL + Sbjct: 835 PKNGARPIKRGISKLLEDRLSDEIINGTLQKGDNIEVT--EANGELVIKY 882 >UniRef50_A5FES3 ATPase AAA-2 domain protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FES3_FLAJ1 Length = 819 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 212/832 (25%), Positives = 381/832 (45%), Gaps = 108/832 (12%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSVDLVALRQELE 59 + + EL +L +A A+ + +++ + HLL A+L+ + S + LEA D+ L + E Sbjct: 7 VFSAELLSALEIAKKIAKTNLNKYYSASHLLKAVLNRDLSLLKRLEAMGKDVYYLDEWAE 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 IE+ P + D +P+ +++ A + +E++ V++A+ S Sbjct: 67 VRIEEE----PKTTHVLDAEPSDLIDEIIKEAESVRIALNEDEISLYAVIIALSSPGVGF 122 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 ++ + +SR +++ + +Q + + + + N Sbjct: 123 NFDQMKSYPISRNELLE------------DQIVIPQTESGAKQEVKKGFLSKYCIHKNLE 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 I P IGRE EL ++LCR K N LL+G+ G+GK+ + + L ++ VP+ Sbjct: 171 KNKKRI-PAIGREAELNAIKEILCRFSKPNVLLIGDRGIGKSILIDTLVQNVITNQVPDA 229 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + ++ LD+ SL+AG Y+G+ E R K +++L+Q + I I I +GG Sbjct: 230 LNKVQLFELDLSSLIAGASYKGEIEDRLKNCIQELKQYPRA---ILIIEEIHILLDKNGG 286 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFS----------------NIFEKDRALARRF-- 341 +N++K L+ G + +I ++T EFS + E D R Sbjct: 287 DSGVSNVLKGELAKG-LNIIATSTIDEFSKRIEKEQGLSGMFEIVKLEESDDETLFRMIR 345 Query: 342 ---------QKIDITEPSIEETVQIING-LKPKYEAHHDVRYTAKAVRAAVELAVKYIND 391 KI I + +I E++++ LK K + + ++N+ Sbjct: 346 ESIKTYQEHHKIQIDDETISESIRLSRRYLKEKSLPESAINLIDHTMSVLKTSGETFLNE 405 Query: 392 RHLPDKAIDVI---------DEAGARARLMPVSKRKKTVNVADIES-------------- 428 + ++++ D+ V KT + D++ Sbjct: 406 KQSIINRLNLLKENTSNLSEDQLIKEYNWFLVDLINKTTFLMDVDEQNEKRNFETSESIL 465 Query: 429 ----------------------------VVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 ++A+ IP + + ++ L N+ + L V Sbjct: 466 NYIENLIKTLEEKALDKRSHIEAFDLSLIIAKKTGIPAGKLKEEEKQKLNNIEEVLNRRV 525 Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LL 517 GQD I + +I AR+GL +P+ SF F GPTG GKTE+ L++ L + ++ Sbjct: 526 IGQDHCIATVAGSILEARSGLSKAGQPIASFFFLGPTGTGKTELAKSLAEFLFQDENAII 585 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 RFDMSE+ E H+ + L GAPPGYVG+++GGLL + + + P++++L DEIEKAHP VF++ Sbjct: 586 RFDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQKPYSIVLFDEIEKAHPSVFDVF 645 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFT 637 LQ+MD G L D G++ DF N +++ T+N G + S ME + F Sbjct: 646 LQIMDEGKLHDRLGKEGDFSNAIILFTSNIGADHIV-NTFNNGEIPTSGSLMEIMGNYFR 704 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFI-VELQVQLDQKGVSLEVSQEARNWLAEKGYD 696 PEF RL I+ F +S + ++ + + E L + +E+ EA+ +LAE GY+ Sbjct: 705 PEFLGRLTEIVPFAPISKENALKIFEIHLKKEFMDLLKNINIKVEIPMEAKLYLAENGYN 764 Query: 697 RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 GARP+ +I+ +L++PLA +++ G + DG ++V + E NE+ + + Sbjct: 765 AKYGARPIKSIIRSHLRRPLAKKIISGEVKDGDTISVTI--ENNEVKWVKEE 814 >UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWU6_9BACL Length = 871 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 212/774 (27%), Positives = 346/774 (44%), Gaps = 101/774 (13%) Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSG-RNEVTGANVLVAIFSEQESQA 120 I + E + + + A + + +L I E+E+ A Sbjct: 108 IIKEPSSSYYLAECNTFPISEYMKSIFDFAEEMRLQNSPDGVIDSYWILNGISQERETNA 167 Query: 121 AYLLRKHEV----------------SRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAG 164 L+ K + + + S G + E SQ + + Sbjct: 168 NQLIYKQYLLTGNIHTEEFLLGVFKNSKFLYKDFSDGKLEREKASKIKKESQISVKLSNP 227 Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 + + T++ A+ G + +IGR++E+ + VL RR KNN +L+G+ GVGK+AI Sbjct: 228 DYSLLNDIATDITLKAKNGELMDVIGRDEEIRKVEMVLTRRDKNNVILLGDGGVGKSAIV 287 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFI 284 +G+A RI + ++ + I + L A K G + +++++++ + ILFI Sbjct: 288 DGIAMRIAKNEI-VSLKGKKILQFSLNDLKA--KIGGVTSEGIIKFIEEMKREKDVILFI 344 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DEIH + +DA KPL++ G R+IG+TT E+ D AL RRF+K+ Sbjct: 345 DEIHMLGRVKH----IMDA---FKPLMARGDFRIIGATTPMEWKLYISSDTALVRRFEKV 397 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY---------------- 388 + EPSIEET+ I+ + YE H V + + AV LA KY Sbjct: 398 IVDEPSIEETINIVKNVSSVYENFHRVNFEENTIELAVRLAKKYLKGEKLPDSAFTVIDN 457 Query: 389 -----------------------------INDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 + + + +D+ R L +K+ Sbjct: 458 AGALARIEANQDIVMIRDYRNEVNKLKKQLKEAESIEYNEAAVDDIRKRLELKVRDFQKE 517 Query: 420 T-----------VNVADIESVVARIARIPEKS--------VSQSDRDTLKNLGDRLKMLV 460 + DI+ V + A + + + + L NL L V Sbjct: 518 RNNLTFNNYEFKITKEDIKKAVEQKAGVKIREKDLKVGKDADEEELSRLSNLKSILATKV 577 Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELL 517 GQ +A + EA+ ++ G + +P+G FLF G +GVGKTE LS+ L +L+ Sbjct: 578 IGQMEATNTIAEAVIRSKTGFRNPKRPIGVFLFLGTSGVGKTETAKVLSEELTGSVDDLI 637 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 R DMSEY + H V++LIGAPPGYVGF GG+LT AV +P +V+LLDEIEKAHP +++++ Sbjct: 638 RLDMSEYQQEHEVAKLIGAPPGYVGFRSGGILTRAVKNNPKSVVLLDEIEKAHPRIYDLM 697 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET-ERKSIGLI----HQDNSTDAMEEI 632 LQV D+G LTD G + DF N ++++T+N G E K +G Q M I Sbjct: 698 LQVFDDGILTDGMGERVDFSNTIIILTSNLGSNLIREEKKVGFAKYGMEQIIQEKTMRAI 757 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAE 692 F PE NR+D I+ F + + I ++ + + + + G L+ ++EA +L + Sbjct: 758 NNFFRPELLNRIDEIVTFKSFTEESIFKITSLLLEKEVEIVKESGYELKFTKEAVRFLVK 817 Query: 693 KGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 YD GAR + R I ++ PL+ ++ + G +V V D + +L + Sbjct: 818 TTYDSEKGARAIRRGITKLIETPLSELIINNCINKGDKVVV--DSDGFKLLFEV 869 >UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit ClpA n=5 Tax=Proteobacteria RepID=A5WFU1_PSYWF Length = 854 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 220/431 (51%), Positives = 304/431 (70%), Gaps = 2/431 (0%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 ML++ LE+SL +A AR+ HE++TVEHLLLALL N +A L++C D+ +LR +LEA Sbjct: 1 MLSRHLEVSLRLAMTLARQKSHEYLTVEHLLLALLENNNAVTTLKSCGADISSLRSDLEA 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGR-NEVTGANVLVAIFSEQESQ 119 +I++ TP L A + E+ Q T F R+LQRA+FHVQS G V G+++LV++FSE ++ Sbjct: 61 YIDKHTPKLDA-DLEQTPQATQGFDRILQRAIFHVQSIGSGRLVQGSDILVSMFSEHDTY 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A YLL+K VSRL++ ++SHG DE + + + ++ + F NLN+ Sbjct: 120 AVYLLKKQGVSRLELTQYLSHGNEGDETREGPSDNEGADPKAARAKKDPLTEFAVNLNKR 179 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G DPLIGR E+ER QVLCRRRKNNPLLVG+ GVGKT+IAEGLAW I+ P+ Sbjct: 180 AAEGKTDPLIGRSSEIERTAQVLCRRRKNNPLLVGDPGVGKTSIAEGLAWLIINNKAPKP 239 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + C IYSLDIGSL+AGTKYRGDFEKR KALL +L++ N+ILFIDE+H IIGAG++ Sbjct: 240 LQGCVIYSLDIGSLIAGTKYRGDFEKRMKALLDELKKKPNAILFIDEVHMIIGAGSSMSS 299 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D +NLIKP L++G++R IGSTT+ E+ +FEKD AL+RRFQKID+ EPS++++++I+ Sbjct: 300 NMDVSNLIKPALANGELRCIGSTTFTEYRQVFEKDHALSRRFQKIDVNEPSVDDSIEILR 359 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLK +YE H+V+YT A+ +AV+L+ K+I++R LPDKAIDVIDEAGA RL + Sbjct: 360 GLKSRYEEFHNVKYTDAALVSAVQLSAKHIHERFLPDKAIDVIDEAGAYKRLGVTPDAAQ 419 Query: 420 TVNVADIESVV 430 + + Sbjct: 420 VEEENQLIDEL 430 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 200/328 (60%), Positives = 250/328 (76%) Query: 411 LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 ++V DIE++++++ARIP KSVS D+ L++L L LVFGQD+AI+ L Sbjct: 490 DDETQAAPTVIDVEDIEAIISKLARIPPKSVSNDDKSLLQHLERDLNRLVFGQDEAIKTL 549 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTV 530 ++AIK++RAGL KP+GSF+FAGPTGVGKTEV+ QL+ +GIEL+RFDMSEYME HT Sbjct: 550 SDAIKLSRAGLKSADKPIGSFMFAGPTGVGKTEVSKQLANLMGIELIRFDMSEYMEAHTA 609 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 SRLIGAPPGYVGFDQGGLLT+ + +HPH VLLLDEIEKAHPDVFN+LLQVMD+G+LTDNN Sbjct: 610 SRLIGAPPGYVGFDQGGLLTEKINQHPHCVLLLDEIEKAHPDVFNLLLQVMDHGSLTDNN 669 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 GR A F+ V+L+MTTN G R S+G QD+S D E + ++FTPEFRNRLD II F Sbjct: 670 GRVASFKQVILIMTTNVGAENISRSSMGFTKQDHSKDNTEAMNRVFTPEFRNRLDAIIQF 729 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 + L ++ VVDKF+VELQ QLD K V LE+ E R +LAEKGYDR MGARPM R+IQ+ Sbjct: 730 NPLDPSIVVSVVDKFLVELQAQLDDKQVMLEIDDEVREYLAEKGYDRLMGARPMQRLIQN 789 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKE 738 +KKPLAN +LFG L +GG V V L ++ Sbjct: 790 EIKKPLANMVLFGDLAEGGAVHVTLSED 817 >UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 RepID=C9MS36_9BACT Length = 813 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 206/822 (25%), Positives = 355/822 (43%), Gaps = 102/822 (12%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQELEAF 61 + L ++ +A A A + +H V HL++A+L+ + RE L + ++ + E + Sbjct: 7 SNSLIAAIKLAKAMAHQDKHLSFGVAHLVIAMLTEQTGLREILNSMQKEVTYISDWFETY 66 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 E V + + + VL A G + V V AI + + Sbjct: 67 REMYVGVE---HDAGEIIADHEVETVLDEAERSKIKLGTDSVDALCVFSAIVRDGVVYSH 123 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 + V+ +++ + T P D GS + ++L + Sbjct: 124 QQIESIGVTEDEIMEYFEASTSPLSPVAEMDMGSSI-------------QYVSDLRRAEL 170 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 + +IGR KE+ ++ L R + LLVG GVGKT I LA + + + E++ Sbjct: 171 LEEGKSIIGRSKEIRLILETLERSERQGILLVGAPGVGKTGIIRALAHEM-EINQDEIIN 229 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGAASGG- 299 ++ L+ +LA + + ++ LL+++ Q +L ID++ ++ +G + Sbjct: 230 QTSLVGLNTSKILAQSGNETEITQKLTGLLQKMNQAKSRGVLVIDDLQLLLESGNPTAAT 289 Query: 300 ---------------------QVDA-----------------------ANLIKPLLSSGK 315 +DA N+++ L + Sbjct: 290 YILNNLDAQICDGAVTLLMVLSMDAFRKHIEKHSIANRLNIINVEELEPNILRSALLKHR 349 Query: 316 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ---------------IING 360 + + F L+ R+ K S + + I+ Sbjct: 350 TILQAYYSLPMTEEAFISAYNLSNRYYKEKSQPASTLDLIDSTAASVRLSNKNAAGIVEQ 409 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLP---------------DKAIDVIDEA 405 L +YE + + + L I ++ D + +D+ Sbjct: 410 LVEQYEKYKAMPV-DDVSDFDLHLLYHTIFNKVSVVLTSKIEDDFVLTDDDSTQEKLDKL 468 Query: 406 GARARLMPV--SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 G + V K + V+ +IESVVA IP + ++D L + +L V GQ Sbjct: 469 GKMLNELSVLSQKGIEKVSSLEIESVVADDTGIPIGKIQAQEKDRLLGIETKLHERVKGQ 528 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFD 520 DKAI L++AI +R+GL KP+GSF F GPTG GKTE+T L+ L + ++RFD Sbjct: 529 DKAIRTLSDAIIESRSGLSDPKKPIGSFFFLGPTGTGKTELTKSLADLLFDDDTAMIRFD 588 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MSE+ E H+ + L GAPPGYVG+++GGLL + + P++V+L DEIEKAH V++I LQ+ Sbjct: 589 MSEFKEEHSAALLYGAPPGYVGYEEGGLLVTKIRQKPYSVVLFDEIEKAHSSVYDIFLQI 648 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEF 640 MD G + D GR+ DF N +++ T+N G + + I HQ S + +E + K F PEF Sbjct: 649 MDEGKVHDKLGREGDFSNSIIIFTSNIGSQWIAEQ-IQKGHQPTSNELIEVMSKYFRPEF 707 Query: 641 RNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNWLAEKGYDRAM 699 RL ++ F ++ V Q+ LQ Q L+QK + L+++ E +L KG+ Sbjct: 708 LGRLTEVVPFSPITEAVAQQIFLLQFSRLQKQLLEQKDIQLDLAPETIAYLTSKGFSPQY 767 Query: 700 GARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNE 741 GARP+A V++ LKK ++ ++ ++ G + + Sbjct: 768 GARPIAGVVRTYLKKTISKLIVSEAIKPGDHIIATYKDGNLQ 809 >UniRef50_Q7NHQ2 ATP-dependent protease ATP-binding subunit n=1 Tax=Gloeobacter violaceus RepID=Q7NHQ2_GLOVI Length = 727 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 200/739 (27%), Positives = 338/739 (45%), Gaps = 56/739 (7%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIE 63 + + +A + + + H LLALL A +D +L Sbjct: 13 PGAKRLVELAQQKQQLSGQPHLQGAHWLLALLERHGAMVETMVGGLDAASL-------AG 65 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 Q L E + T VL+ A + ++ G+N ++ + AA + Sbjct: 66 QWQSRLAPGAAETPLEST----EVLELARANAEARGQNRIS-----------ERDMAAVI 110 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 L + + I+ T ++ PG +P + + +E F +L + A+ G Sbjct: 111 LARCGYRPAETDLLIA------IETTAAPPGYRPRARKPTP---MLERFGRDLTREAQQG 161 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 + +GRE+E++ I+ LCRR K NPLLVG +GVGKTAI EGLA R+V VP V+A Sbjct: 162 QLSAFVGREEEVQLVIETLCRRTKRNPLLVGPAGVGKTAIVEGLAQRLVASQVPAVLAGA 221 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 ++++ +L+AGT G+ E RFKALLK+ QD +LFIDE+H+++GAG +G D Sbjct: 222 RLFAVQPSTLVAGTSVVGELENRFKALLKEASQDG-VLLFIDEVHSVVGAGGRAGTD-DV 279 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP 363 A+L+KP L+ G+I I +TT EF E D AL RRFQ I I E + E+T+ ++ L Sbjct: 280 ASLLKPALARGEIACIAATTDDEFRRYIEPDAALERRFQPIRIQELNAEQTLAVLRALAH 339 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNV 423 + V+ A+ V+ A +++ +R PDKAID++++ A V++ K V++ Sbjct: 340 ELGQLRGVQVGEAALSWLVDFAAQFLPNRRFPDKAIDLLEQCVA----FAVARDKGAVDL 395 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG- 482 +D +V R+ +P + L L L V ++ I+AL + + L Sbjct: 396 SDATAVARRMVGMPVAV-----AERLTALRRELPGRVALVEEDIQALVGRLNVTLRSLDL 450 Query: 483 HEHKPVGSFLF---AGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPG 539 +P + L A G +L ++ D + +S L+GAPPG Sbjct: 451 RPARPNAALLLVDRAAALGEALGGALAELLFGSAERVIAIDFGSFTSPADLSMLLGAPPG 510 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+ L + + P VL D + HP + +L Q +++G TD +G++A + Sbjct: 511 YVGYAD-TLPIHRLAQMPWCVLRCDNVHACHPQIREVLAQALESGFFTDAHGKRAYLSDA 569 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTD-----AMEEIKKIFTPEFRNRLDNIIWFDHLS 654 V+++T A V ++S+G + + D ++ + F R D + Sbjct: 570 VVLIT--AEVALASQRSLGFAGERPAADSESPGVIQSASAVLGAGFVGRCDLVFAAAAGV 627 Query: 655 TDVIHQVV-DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + ++ + +L + ++G+ L WLA++ R+ G R R++ + L Sbjct: 628 DAAQQRWLRERLLADLSARYRRQGLELHWDDSLVQWLADQHTSRS-GPRDWERLVDERLS 686 Query: 714 KPLANELLFGSLVDGGQVT 732 L L G V V Sbjct: 687 PALIEYLPPGEQVRSLVVR 705 >UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n=12 Tax=Bacteroidales RepID=Q64SE5_BACFR Length = 812 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 201/824 (24%), Positives = 365/824 (44%), Gaps = 101/824 (12%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQELEAF 61 + L +L +A A + +H V HL++A+ + + +E L + D+ + + + Sbjct: 7 SPSLVSALKIARGMALQDKHNTFGVSHLVMAMFAENTGLKEILSSMQKDVGYIMEWFDTH 66 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 E + + +P +VL + G + + V AI E + Sbjct: 67 REMYRS---SGTSTEEVEPDEEVSKVLDESERSKIKLGADSIDSICVFTAILREGVVYSH 123 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 + +VS D+++ + T G + + NL + Sbjct: 124 QQIEILDVSEDDILSHYNALTPLHSY-----QGEEMQITASVP-------YADNLKKQET 171 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 + ++GREKE+ ++ L R L+VGESG+GK++I I + + E++ Sbjct: 172 INAGGFVVGREKEVRTILECLERSENKGILIVGESGIGKSSIINAFVKDICENE-DEMLK 230 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 +I L+ LLA T + ++ L+ +L Q ++L ID++ ++ + Sbjct: 231 QISIVGLNTAKLLASTSSETEIAQKVVNLMHKLNQLEQAVLVIDDLQVLLENSVSGKAST 290 Query: 302 -----------DAANLIK--------------PLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 AANL+ P+ I I + + + Sbjct: 291 LINILSAQISEGAANLVLTLTNDSYRKNIEKHPIEGRLDIIKIEELDTATLESAIQLHKK 350 Query: 337 LARRFQKIDITEPSIEETVQI-------------------------------INGLKPKY 365 + ++ I++ I++++ + Sbjct: 351 RIENYYELRISDACIKDSIALSKRYFKERSLPSAAIDLLDRTAAAVRLCNKNARASVSDL 410 Query: 366 EA-HHDVRYTAKAVRA--------------AVELAVKYINDRHLPDKAIDVIDEAGARAR 410 EA +++ + + +V L K ++D ++ DK D+ +AG + Sbjct: 411 EADFEEIKSLDEKISEGPLYLLYRSVFSKISVVLTTK-LSDNYVWDKEDDIAIKAGRLSG 469 Query: 411 LMPV-----SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDK 465 ++ + + + ++IE++VA IP + ++D L ++ +L+ V GQ++ Sbjct: 470 IIKELKALSDQSIEEIRSSEIEAIVAECTNIPIGKIQAREKDRLLSIESKLQERVKGQNR 529 Query: 466 AIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMS 522 AI L++AI +R+GL KP+GSF F GPTG GKTE+T L++ L + ++RFDMS Sbjct: 530 AITTLSDAIIESRSGLSDPKKPIGSFFFLGPTGTGKTELTKSLAELLFDDESAMIRFDMS 589 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 E+ E H+ + L GAPPGYVG+++GGLL + + P++V+L DEIEKAH V+++ LQ+MD Sbjct: 590 EFKEEHSAALLYGAPPGYVGYEEGGLLVTQIRQKPYSVVLFDEIEKAHSSVYDVFLQMMD 649 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRN 642 G + D GR+ DF N +++ T+N G + + I H +S +E + + F PEF Sbjct: 650 EGKIHDKLGREGDFSNSIIIFTSNIGSQWIVEQ-IQSGHTPDSGKLIEVMAQYFRPEFLG 708 Query: 643 RLDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGA 701 RL ++ F + +V Q+ + LQ QL QK + L +S EA LA KGY GA Sbjct: 709 RLTEVVPFAPIDENVAKQIFNLHFGRLQEQLMKQKNIQLNLSDEALQHLANKGYSPKYGA 768 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 RP+A VI+ +KK ++ ++ + G + + EL + Sbjct: 769 RPIAGVIRTYIKKSVSRLIVSEQIKSGDNIVINY--RNGELIWE 810 >UniRef50_A6EIG8 Putative ATP-dependent protease n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIG8_9SPHI Length = 828 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 195/837 (23%), Positives = 364/837 (43%), Gaps = 105/837 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE-ALEACSVDLVALRQELEA 60 +++ + L++ +A + A+E+ + + HLL L+ L + D + + E Sbjct: 6 ISESVRLAIRVAQSLAKEYHNAEFSAAHLLKGLMHKEVGLIGFLNSIDKDEAYISEWAEV 65 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 I++ V A + D + + + A G + +T VL A+ Sbjct: 66 RIDELDKVAVAPD---DVKGGREIAGIFEEADLVRIKLGLDLITPVCVLTALCKPTVGFP 122 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE--EQAGGEERMENFTTNLNQ 178 L+ + ++++ E Q+ PG+ +++ G + + + + Sbjct: 123 PDQLKSFPIKEKEILDLY---LDDTELKQAVKPGTTVDAKTGSSEGAKAALHKYCIDRIA 179 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR G DP+IGR+KE +++L RR K N ++ G++GVGKTA+ +GLA I+ G+VP Sbjct: 180 QARDGKTDPIIGRDKETRMVLEILGRRTKPNVIITGDAGVGKTALVDGLAQDILSGNVPA 239 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 ++ + ++ LD+GSL+AG Y+G+ E R K +LK+++Q +ILFIDEIHT++ G Sbjct: 240 ILKNVQLFELDLGSLIAGASYKGEIEDRLKNILKEIKQYDKAILFIDEIHTLLDNKGPIG 299 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G NL+KP L+ G+I VIG+TT E+ I E ++A +RRF+ + + EP+ ++++ Sbjct: 300 GG--VGNLLKPELARGEITVIGATTMDEYRKIIEPEQAFSRRFEVLQVQEPNEASAIKML 357 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 L KYE HH ++ A+ V LA +Y+ DR LPD A D++D A ++M + Sbjct: 358 EKLAEKYEQHHQLKIQKDAIPECVRLAKRYMKDRRLPDAAFDLLDRTMAAMKMMNDTSD- 416 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV----FGQ--DKAIEALTE 472 + + A + ++ E V+ + L +++ V GQ D+ E Sbjct: 417 -----QVLAELDADLLQLNEAEVADDQLADYRWLYQQMQDKVSPILVGQLTDETQVDAFE 471 Query: 473 AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRF---------DMSE 523 ++ + + + V K ++ +S GI L + +M Sbjct: 472 TVEEFKDYISRNLDALKVLAETKHDEVAKQDIASIVSYKTGIPLGKIQAQEKEKLLNMEG 531 Query: 524 YMER-----------------HTVSRL------IGA-----PPGYVGFDQGGLLTDAVIK 555 Y+++ + S L IG+ P G + + + + Sbjct: 532 YLKKRVVGQDRALKSVADAILESRSGLNKKGQPIGSFFLLGPTGTGKTELAKSIAEFLFN 591 Query: 556 HPHAVLLLDE----------------------------IEKAHPDVFNILL--------- 578 A++ D + K +++LL Sbjct: 592 DEKAMIRFDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQQPYSVLLFDEIEKAHP 651 Query: 579 QVMDNGTLTDNNGRKAD-------FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE 631 V D + G D F N +++ T+N G + + S ME Sbjct: 652 SVFDTFLQILDEGHMHDRLGKEGDFSNALILFTSNIGSEWIAEQ-LSKSLVPTSQQLMEI 710 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLA 691 + + F PEF RL I+ F +S D + ++ + + L LD++G++ E+ + A LA Sbjct: 711 MARHFRPEFLARLSEIVPFAPISEDNVVRIFEIQLRSLVEALDKQGITFEIDEAATKMLA 770 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 G+ GAR ++ VI++ L++P++ ++ G+L G + V ++L + Sbjct: 771 LSGFTPKYGARQLSGVIRNELRRPISKYIISGALKKGNFIQVKKHPTDDQLEWTINE 827 >UniRef50_UPI00016B2080 clp protease ATP binding subunit n=4 Tax=candidate division TM7 RepID=UPI00016B2080 Length = 799 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 201/683 (29%), Positives = 337/683 (49%), Gaps = 36/683 (5%) Query: 66 TPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLR 125 TP L A+ +D + T + Q+ ++ + +G V G V +AI Q +L Sbjct: 125 TPNLLANTASKDVKLT---DNLWQKVIYIKEKTGSEIVHGGVVALAILQ-QNPHCETILA 180 Query: 126 KHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQA---GGEERMENFTTNLNQLARV 182 V DV+ I R + S D + + G ++ F +L Sbjct: 181 HMHVDENDVMECIRWYNRLQKIVDSGDSPKRTGGIARDWSFGYTPLLDRFGI---RLGAS 237 Query: 183 GGIDPLI--GREKEL-ERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI--VQGDVP 237 G+D + GR +E+ + I + N LVG +GVGKTAI A R+ D+P Sbjct: 238 RGLDFSMESGRHQEIINQLINNFGTGGRQNAALVGPTGVGKTAILHSFASRLLDAAADIP 297 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + ++ LD +L++ RG+ E +L + N I+ +D G Sbjct: 298 NNLKFRQVFLLDSSALISAAPGRGELEGLVMRVLGEAFTAKNIIICLDNAQLFFEEGV-- 355 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +D +N++ P+L +G +RVI + Q+F I ++ +L+ +I + EP ++T+ Sbjct: 356 -GSIDISNVLLPILEAGNLRVILTMDDQQFLQISHRNPSLSNALNRIVVGEPEKKDTITA 414 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + E V Y +++ A L+ +YI+D +P +A+ +++ A A Sbjct: 415 MQDQILTIEYKRKVIYMYQSLIEAYRLSERYIHDLAMPGRAVKLLESAANYAEGG----- 469 Query: 418 KKTVNVADIESVVARIARIPEK-SVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM 476 V + ++ + + + + S DR+ L NL DR+ + Q A++A+++A++ Sbjct: 470 -GLVTMNSVQQAIEKTMDVKVSVASSADDREMLLNLEDRIHKRMINQTHAVKAVSDALRR 528 Query: 477 ARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRL 533 ARAG+ ++++P+G+FLF GPTGVGKTE+ L++ ++R D++EY+ VSRL Sbjct: 529 ARAGVRNQNRPIGTFLFLGPTGVGKTELAKALAEVYFGGEDNIVRLDLNEYVGLEDVSRL 588 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 I LT ++K P +V+LLDEIEKAHP+V LLQ++D G L D N R+ Sbjct: 589 IADA-----SSDPNSLTAKILKQPFSVVLLDEIEKAHPNVLTTLLQLLDEGILRDINNRE 643 Query: 594 ADFRNVVLVMTTNAGV-RETERKSIGLIHQDNSTDAMEEIKKI--FTPEFRNRLDNIIWF 650 FR+ +++ T+NAG R E G + + + E+ K+ F PEF NR D I F Sbjct: 644 VSFRDAIVIATSNAGADRIREYIERGYKVEQFESQIVNELIKLQQFKPEFLNRFDEITVF 703 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L + QVVD + + L Q+ V ++V +A+ L E GYD +GARPM R+IQ Sbjct: 704 SPLGKRELLQVVDIMLTGINKTLAQQKVQVKVDDDAKILLVENGYDPQLGARPMRRIIQK 763 Query: 711 NLKKPLANELLFGSLVDGGQVTV 733 ++ +A E+L G + GG + + Sbjct: 764 TVENTVAKEMLSGLVSPGGIIEI 786 >UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepID=CLPB_CHLPN Length = 866 Score = 434 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 182/480 (37%), Positives = 276/480 (57%), Gaps = 24/480 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL--EACSVDLVALRQELE 59 + + +L AF A+ +H ++T HLLLALL N + L + + L ++ Sbjct: 4 FSDAVSEALEKAFELAKSSKHTYVTENHLLLALLENTESLFYLVIKDIHGNPGLLNTAVK 63 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + V+ E E D +P+ Q +L+ A ++ G ++G ++L+A +S + Sbjct: 64 DALSREPTVV---EGEVDPKPSPGLQTLLRDAKQEAKTLGDEYISGDHLLLAFWSSNKEP 120 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + +VS D+ N I+ R G++ +S + +E + NL L Sbjct: 121 FNSWKQTTKVSFKDLKNLITKIRR----------GNRMDSPSAESNFQGLEKYCKNLTAL 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGR++E+ R IQVL RR KNNP+L+GE GVGKTAIAEGLA R++QGDVPE Sbjct: 171 AREGKLDPVIGRDEEIRRTIQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRLIQGDVPES 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASG 298 + +Y LD+G+L+AG KYRG+FE+R K++LK +E D I+FIDE+HT++GAGA G Sbjct: 231 LKGKQLYVLDMGALIAGAKYRGEFEERLKSVLKDVESGDGEHIIFIDEVHTLVGAGATDG 290 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DAANL+KP L+ G + IG+TT E+ EKD AL RRFQ I +TEPS+E+ V I+ Sbjct: 291 A-MDAANLLKPALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFIL 349 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM------ 412 GL+ KYE H VR T A+ AAV L+ +YI DR LPDKAID+IDEA + R+ Sbjct: 350 RGLREKYEIFHGVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPL 409 Query: 413 PVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDT-LKNLGDRLKMLVFGQDKAIEALT 471 P+ ++++ + ++ + + P + L + L L G D+ + ++ Sbjct: 410 PIDEKERELAALIVKQEAIKREQSPSYQEEADAMQKSIDALREELASLRLGWDEEKKLIS 469 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 193/805 (23%), Positives = 342/805 (42%), Gaps = 100/805 (12%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELEA 60 + L+ L A A+ E+++ +HLLLA + + V L+ + Sbjct: 82 SPGLQTLLRDAKQEAKTLGDEYISGDHLLLAFWSSNKEPFNSWKQTTKVSFKDLKNLITK 141 Query: 61 F-----------------IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRN-- 101 +E+ L A E P + ++R + + +N Sbjct: 142 IRRGNRMDSPSAESNFQGLEKYCKNLTALAREGKLDPVIGRDEEIRRTIQVLSRRTKNNP 201 Query: 102 ----------EVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSS 151 + + + ++ L+ ++ LD+ I+ + E + Sbjct: 202 MLIGEPGVGKTAIAEGLALRLIQGDVPES---LKGKQLYVLDMGALIAGAKYRGEFEERL 258 Query: 152 DPGSQPNSEEQAGGEERMENFTTNLNQLARVGGID------PLIGRE----------KEL 195 + ++ T + A G +D P + R E Sbjct: 259 KSVLKDVESGDGEHIIFIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGATTLNEY 318 Query: 196 ERAIQ---VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG--DVPEVMADCTIYS--L 248 ++ I+ L RR + P+ V E E A I++G + E+ I L Sbjct: 319 QKYIEKDAALERRFQ--PIFVTEPS------LED-AVFILRGLREKYEIFHGVRITEGAL 369 Query: 249 DIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS-------GGQV 301 + LL YR + +I IDE ++I S + Sbjct: 370 NAAVLL---SYR---------YIPDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERE 417 Query: 302 DAANLIKP-LLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 AA ++K + + + +E + + AL + +E ++I+G Sbjct: 418 LAALIVKQEAIKREQ----SPSYQEEADAMQKSIDALREELASLR---LGWDEEKKLISG 470 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 LK K + ++++ + + L + + I + A ++ Sbjct: 471 LKEKKNSLESMKFSEEEAERVADYNRVAELRYSLIPQLEEEIKQDEASLNQRDNRLLQEE 530 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ I VVA IP + + + + + L L + L+ V GQ A+ A++++I+ AR G Sbjct: 531 VDERLIAQVVANWTGIPVQKMLEGEAEKLLILEESLEERVVGQPFAVSAVSDSIRAARVG 590 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAP 537 L +P+G FLF GPTGVGKTE+ L+ L + ++RFDMSEYME+H++S+LIG+ Sbjct: 591 LNDPQRPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMSEYMEKHSISKLIGSS 650 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GG L++A+ + P++V+L DEIEKA +V NILLQV D+G LTD RK + + Sbjct: 651 PGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVLNILLQVFDDGILTDGKKRKVNCK 710 Query: 598 NVVLVMTTNAGVRET----ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHL 653 N + +MT+N G E +K L + + +K+ +PEF NR+D I+ F L Sbjct: 711 NALFIMTSNIGSPELADYCSKKGSELTKEAILSVVSPVLKRYLSPEFMNRIDEILPFVPL 770 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + I ++V + + +L + ++L +L+E+GYD A GARP+ R+IQ + Sbjct: 771 TKEDIVKIVGIQMRRIAQRLKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVV 830 Query: 714 KPLANELLFGSLVDGGQVTVALDKE 738 L+ LL G + + + + KE Sbjct: 831 ILLSKALLKGDIKPDTSIELTMAKE 855 >UniRef50_B9Y438 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y438_9FIRM Length = 665 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 197/719 (27%), Positives = 350/719 (48%), Gaps = 67/719 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 + + + ++ A AR+ ++ F+ EHLL+ +L + + ++ L + L+++++ Sbjct: 5 FDPQAQKAIQSARTVARQMKNTFIGTEHLLIGILQTDHSALQKLLSERGITAEQLKEDIQ 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 EE R T+ T + Q +L++ + S +T + + + Sbjct: 65 VLFGFNE------EETRQTEYTQTVQEILEKCLVEAARSTPPVITLKMLTRTLLETPNNV 118 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A+ LLR+++V D+ I R+D + +S NLNQ Sbjct: 119 ASELLRRYDV---DIAGLIVELNRQDIDSLNSIRE------------------LRNLNQW 157 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 ++ R+ ++ I++LCR+ K NPLL+G+ GVGKTA+ E LA I QG+VP+ Sbjct: 158 -MANRPSNIVERQAQMNSIIRILCRKEKANPLLLGDPGVGKTALVEQLAKSIDQGEVPDC 216 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + I+ L + L+AGTKYRG+FE++ + +L L Q ILFIDEIH IIGAG A G Sbjct: 217 LRGSVIFELSVNGLVAGTKYRGEFEEKIQKILDALRQFPQVILFIDEIHQIIGAGKAE-G 275 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D A ++KP+L+ G+IR IG+TTY E+ EKDRAL RRFQ + I EP ++ ++I Sbjct: 276 SIDVAGVLKPVLARGEIRCIGATTYDEYLKFIEKDRALQRRFQPVMIEEPDLDSARRMIE 335 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 P+YE HH +++ + V +E ++ R LPDKA+DVID A A AR+ S Sbjct: 336 AKIPEYEQHHQIQFPMELVGPLMESTQYFMPSRKLPDKALDVIDLACASARMDHRS---- 391 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 TV D++ ++ ++ +P + + DR + RL+ + GQ++ + + + ++ Sbjct: 392 TVAQRDVDQILEQLTDVPLQDRCRKDR-----VMQRLRRELIGQEEILTQIDQQLQWMEL 446 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGA 536 G+ + +P+G +L G K + L++ + DM +Y + R + Sbjct: 447 GVVQD-RPLGVWLLCGKQVSLKQRLAKVLAQLYFGQNDRRIEVDMMDYQDSQAGYRFVH- 504 Query: 537 PPGYVGFDQGGLLT-DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 G DQ L + + + P+++L + ++ A P+ IL + ++ G + + GRK D Sbjct: 505 -----GQDQQYSLWLEKLRRSPYSLLFIRNLDAARPECAAILRKGIEQGLIEEEAGRKVD 559 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 R+ ++++ T E R GL Q S E + D I+ F L + Sbjct: 560 LRHCLILLDT-----EQSRTVSGLGFQAVSVKMENE-------GWDEIADAILDFRTLDS 607 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + + + + E+ Q+ Q ++ E+ ++ + +G D R + + KK Sbjct: 608 AEMETLARRRLQEITRQMPQ--LAFELGEDTPFDI--EGEDPEKIDRQIRSYLTKRFKK 662 >UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SIE3_VERA1 Length = 744 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 213/665 (32%), Positives = 325/665 (48%), Gaps = 90/665 (13%) Query: 163 AGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTA 222 + +E F +L Q A+ G +DP+IGR+ E++R IQ+L RR KNNP+L+G +G GKTA Sbjct: 74 EPEKPALEQFGIDLTQRAKDGKLDPVIGRDSEIQRTIQILSRRTKNNPVLIGNAGTGKTA 133 Query: 223 IAEGLAWRIVQGDVPEVMADCTI----------------------------YSLDIGSLL 254 I EGLA RIV+GDVPE + + S+D +LL Sbjct: 134 ILEGLALRIVRGDVPESVKNKRSSMRFRRPRAKSSSSSTSYTRSLVSARPKASIDASNLL 193 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD------------ 302 RG+ + L + Q + I+ + + Sbjct: 194 KPALARGELQCCGATTLDEYRQIEKDVALARRFQPIMVNEPSVQDTISILRGIKDKFLPD 253 Query: 303 --------AANLIK--------PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 AA+ +K +++ + + + EKD A R +K+ Sbjct: 254 KAIDLMDEAASHLKLQHESKPEDIMALDQKIMTIQIELESLRK--EKDVASRERREKL-- 309 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK-------------YINDRH 393 E ++ + I GL ++E R +AV+ A E K + Sbjct: 310 -ETDLKALQEEILGLTTRWEKE---RAEIEAVKNAQEELDKAKVELDVAQREGNFGRAGE 365 Query: 394 LPDKAIDVIDEAGARARLMPV-SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNL 452 L I ++E + S +V DI +VV+RI IP ++ L ++ Sbjct: 366 LRYSVIPFLEEKIPKEEDKQDGSLIHDSVTADDIAAVVSRITGIPVSKLTSGHIQKLVHM 425 Query: 453 GDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 D L+ V GQD+AI+A++ A+++ RAGL +++P+ SF F GPTGVGKTE+ +L+ L Sbjct: 426 EDALQASVRGQDEAIKAVSNAVRLQRAGLSGDNRPLASFFFLGPTGVGKTELCKKLAGFL 485 Query: 513 GI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA 569 ++RFDMSE+ E+HT+SRLIGAP GYVG++ G LT+AV + P+AVLL DE EKA Sbjct: 486 FSTESAVVRFDMSEFQEKHTISRLIGAPSGYVGYEDAGQLTEAVRRKPYAVLLFDEFEKA 545 Query: 570 HPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET---------ERKSIGLI 620 H D+ +LLQV+D G LTD G K DFRN ++V T+N G G + Sbjct: 546 HRDISALLLQVLDEGYLTDAQGHKVDFRNTIIVFTSNLGADILVGANSSHPYTETEDGDV 605 Query: 621 HQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSL 680 D M+ + + PEF NR+D+ I F L+ + +VD + ELQ +LD + ++L Sbjct: 606 SPDVRKAVMDVVASAYPPEFLNRIDSFIVFKRLAKMALRDIVDIRLRELQARLDDRRITL 665 Query: 681 EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 VS + R+WLAE+GYD GARP+ R+I + + LA+ ++ G L G V + ++ + Sbjct: 666 NVSSDVRDWLAERGYDPRFGARPLNRLITNEIGNGLADRIIRGELKMGETAEVVIKEDGS 725 Query: 741 ELTYG 745 L Sbjct: 726 GLEVK 730 >UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms RepID=Q93ZM4_ARATH Length = 558 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 167/444 (37%), Positives = 264/444 (59%), Gaps = 15/444 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++ + ++ AR H F+ E +LL L+ + A + L++ ++L R E+E Sbjct: 118 FTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVE 177 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + + + T +RVL+ ++ + G N + ++L+ + E E Sbjct: 178 KIIGRGSGFV-----AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 232 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L ++ + ++ +S G + + +E + TNL +L Sbjct: 233 AARVLENLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNSKM----PTLEEYGTNLTKL 288 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP++GR+ ++ER +Q+L RR KNNP L+GE GVGKTAIAEGLA RI GDVPE Sbjct: 289 AEEGKLDPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPET 348 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + T+ +LD+G L+AGTKYRG+FE+R K L++++ Q ILFIDE+HT+IGAGAA G Sbjct: 349 IEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGA 408 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G+++ IG+TT E+ EKD AL RRFQ + + EP++E +QI+ Sbjct: 409 -IDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEGAIQILQ 467 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YE HH +RYT +A+ AA +L+ +YI+DR LPDKAID+IDEAG+R RL Sbjct: 468 GLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQL--- 524 Query: 420 TVNVADIESVVARIARIPEKSVSQ 443 ++E + +I + ++V + Sbjct: 525 PEEARELEKQLRQITKEKNEAVRK 548 >UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA Length = 905 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 179/476 (37%), Positives = 272/476 (57%), Gaps = 32/476 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 Q + +L+ A A + + HLL A+L N AR +EA + Q + Sbjct: 5 FTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMARALIEAAGGNA----QNVS 60 Query: 60 AFIEQTTPVLPASEEERDTQPTLS--FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQE 117 A + Q LP++ TQP +S VL +A +Q G VT +LVAI + + Sbjct: 61 AEVHQAMQSLPSASGSTTTQPDVSRQLSAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKP 120 Query: 118 SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 +Q+A +L K+ ++ + N ++ D S+D G + +E ++T+L Sbjct: 121 NQSADILEKNGLTADKLRNALTAARGSDRKVTSAD---------AEGSYKALEKYSTDLT 171 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 A+ G +DP+IGR++E+ R IQ+L RR KNNP+L+GE GVGKTA+ EGLA RIV GDVP Sbjct: 172 AAAKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVP 231 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAA 296 + + + SLD+GS++AG+KYRG+FE+R K++L+++++ D I FIDEIHTI+GAGAA Sbjct: 232 TTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLEEIKKADGQIITFIDEIHTIVGAGAA 291 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 G +DA N++KP+L+ G++R+IG+TT E+ EKD AL RRFQ++ + EPS+E+TV Sbjct: 292 E-GSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVA 350 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 I+ G+ PKYEAHH V A+ AA L+ +YI+ R LPDKAID++DEA A R+ S Sbjct: 351 ILRGIAPKYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSS 410 Query: 417 RKKTVNVADIESVVA-------------RIARIPEKSVSQSDRDTLKNLGDRLKML 459 ++ + + + E + S +D L +L + Sbjct: 411 PEEIDELRRQVDRLKMEKSYLLGNPKNDKATEKAEAELDDSAKDRLADLNQEIADK 466 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 209/813 (25%), Positives = 350/813 (43%), Gaps = 108/813 (13%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELEA 60 +++L L+ A + E++TV+ +L+A+ + + + LE + LR L A Sbjct: 84 SRQLSAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKPNQSADILEKNGLTADKLRNALTA 143 Query: 61 FIEQTTPVLPASEE----------------------ERDTQPTLSFQRVLQRAVFHVQS- 97 V A E + +RV+Q ++ Sbjct: 144 ARGSDRKVTSADAEGSYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNN 203 Query: 98 ---SGRNEVTGANVLVAIFSE-QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDP 153 G V V+ + L+ ++ LD+ + ++ + E + Sbjct: 204 PVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKS 263 Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGID------PLIGRE----------KELER 197 + + ++ T + A G +D P++ R E Sbjct: 264 VLEEIKKADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEYRE 323 Query: 198 AIQ---VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 I+ L RR + + VGE V T I++G P+ A + D +L+ Sbjct: 324 NIEKDPALERRFQQ--VFVGEPSVEDTV-------AILRGIAPKYEAHHKVTIGD-DALV 373 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEI--HTIIGAGAASGG------QVDAANL 306 A + + +I +DE H + ++ QVD + Sbjct: 374 AAAT-------LSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELRRQVDRLKM 426 Query: 307 IKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKY- 365 K L G + +T E E D + R ++ E +NGLK ++ Sbjct: 427 EKSYLL-GNPKNDKATEKAE----AELDDSAKDRLADLNQEIADKSEK---LNGLKARWD 478 Query: 366 -EAHHDVRYTA-----KAVRAAVELAVK---YINDRHLPDKAIDVIDEAGARARLMP--- 413 E + R +R E + + I I + A+A Sbjct: 479 AEKNGHNRIGDLRKKLDELRTQAEKYEREGDLAKSSAINYGEIPAIQKEIAQAEKNEAES 538 Query: 414 ---------VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD 464 V V+ I +V+ IP + Q + + L ++ + L V GQ Sbjct: 539 GGADNANADVPMVPDRVDADSIAEIVSDWTGIPVGRLMQGENEKLLHMEEYLGKRVIGQK 598 Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDM 521 +AI+A+++A++ +RAG+ ++P GSFLF GPTGVGKTE+ L+ L + ++R DM Sbjct: 599 EAIQAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDM 658 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM 581 SEYME+ +VSRLIGA PGY+G+++GG LT+AV + P++V+L DE+EKA+P+VF++LLQV+ Sbjct: 659 SEYMEKASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVL 718 Query: 582 DNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFR 641 D+G LTD GR DF+N +L+MT+N G + + M+ + F PEF Sbjct: 719 DDGRLTDGQGRTVDFKNTILIMTSNLGSQFLVNPDM--DADAKKKAVMDAVHMQFKPEFI 776 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 NRLD ++ F L+ + + +VD + ++ +L + ++L+V+ AR WLA GYD A GA Sbjct: 777 NRLDELVMFHPLTREELGGIVDIQVAQVSARLTDRRITLDVTDSAREWLANTGYDPAYGA 836 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 RP+ R++Q + LA LL G + DG V V Sbjct: 837 RPLRRLVQTEVGDQLARMLLAGEVHDGDTVLVD 869 >UniRef50_A6GDL3 ClpA/B family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDL3_9DELT Length = 1236 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 174/688 (25%), Positives = 294/688 (42%), Gaps = 62/688 (9%) Query: 69 LPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHE 128 P +ER P L+ Q V QRA + G LR Sbjct: 121 FPYPADERGRLPELA-QVVFQRAWSEAELLGPE-------------------LDWLRTQG 160 Query: 129 VSRLDVVNFISH---GTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGI 185 L +V F E ++ + + G + + TNL A + Sbjct: 161 REHLRLVGFRGQPPTLLGSLERKSKGPEMARIGTRRRTAGVGLLHDLGTNLTHKAGQDEL 220 Query: 186 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD--- 242 P + RE E+ Q+LC RK LL+G GVGKT + L I+ D + Sbjct: 221 RPGMPREPYREQLRQLLCGERKAPVLLIGPPGVGKTTLLHRLVLDILDADGWAAHQNLDR 280 Query: 243 -CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 ++ + ++AG Y G +EKR LL+Q +L++D++H G + Sbjct: 281 VHHVWQISGRRIIAGMSYLGQWEKRCVELLEQT-YAKKLLLYVDDVHAWGRIGESKQNDR 339 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 A+ + L+ G++ ++G T +++ + A F + + T++++ Sbjct: 340 CLADFFRGPLARGELTLVGECTPEQYQQLQADAGNFANAFTTVHVEPTDTATTMRMLVHE 399 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV------- 414 E + + R+ EL+ + P KA++++ AR R+ P Sbjct: 400 ARALELTCGCSFDPRVYRSIYELSGSLYSGTAYPGKALELVRTLAARHRISPERIDRLLV 459 Query: 415 -------------SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF 461 ++ V ++ +++++ +PE +S + + V Sbjct: 460 DEVLMRAPKPKDRDSGREQVGTGELIALLSQRTGMPELLLSPERPLDAEAVAAAFAAQVM 519 Query: 462 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLR 518 GQD+A+E + + I +AGL +P G FLF GPTG GKTE+ L++ L + L+R Sbjct: 520 GQDQAVEVVRDLIVRIKAGLCDPSRPYGVFLFTGPTGTGKTEMAKALAEYLFGDESRLIR 579 Query: 519 FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL 578 DMSEY H +RLIG F G+LT A+ P +V+LLDE+EKA P V N+ L Sbjct: 580 LDMSEYNVPHAAARLIGDR-----FQPQGVLTSAIRAQPFSVVLLDEVEKAAPSVLNLTL 634 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNA----GVRETERKSIGLIHQDNSTDAMEEIKK 634 Q+ D+G LTD G ADFR+ VL+MT+N G G + D + +++ Sbjct: 635 QLFDDGRLTDAAGEVADFRHAVLIMTSNLGAGGGSSMGFGGDAGARSRAVLLDISKAVRE 694 Query: 635 IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAE 692 F PE NR+D ++ F LS + K + L + L ++ + ++ + + Sbjct: 695 FFPPELFNRIDRVVQFHPLSPTAARAIARKELGRLLNRRGLLERNTFVRYTEAVLARVVD 754 Query: 693 KGYDRAMGARPMARVIQDNLKKPLANEL 720 +G++ GAR + R ++DN+ L + L Sbjct: 755 QGFNARDGARSLKRWLEDNIGSLLVDAL 782 >UniRef50_Q1D2Y8 ClpA/B family protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D2Y8_MYXXD Length = 1127 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 168/588 (28%), Positives = 289/588 (49%), Gaps = 20/588 (3%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + NL+ AR G ++ GRE + ++ L R + +LVG G GKTA+ Sbjct: 216 LRAVARNLSHGARDGTLERCFGREALVRELVEALEGREGSALVLVGPPGAGKTALIHEAV 275 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 R+ + ++ +D +AG Y G +E R + ++K+L + + +L++D++ Sbjct: 276 SRLTARQDAAGVRR-DVWRVDGNQFIAGMMYVGQWEARARGVVKELMEVGD-LLYVDDLA 333 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 +++ AG + + A ++P ++ G++ V+ +T + F + E+ LA F+ I + Sbjct: 334 SLVYAGRTRNERTNVAQFLEPHMARGELTVLAESTPERFERVREEAPTLASLFRVIHVPA 393 Query: 349 PSIEETVQIINGLKPKYEAHH---DVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 T+ + G EA V+ + A+ + L ++++ P KA+ ++ Sbjct: 394 LDARATLPALLGTVRDLEAEGTDSAVQLSPLALETLLSLQERFVSHEAFPGKAVRLLRRV 453 Query: 406 GARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDK 465 A R + + + D+ + +P+ + + + L ++ V GQ + Sbjct: 454 MA--RQGVSTSGTRRFSSGDVIDAMREQTGLPDFILGSAQPKKREALTWEMQRQVAGQPE 511 Query: 466 AIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMS 522 A+EA+ +AI ++ L KP+ ++LF GPTGVGKTE L++ L L+RFDMS Sbjct: 512 AVEAVVDAILTLQSALQPSDKPLATYLFVGPTGVGKTETAKALARTLFGGEQRLIRFDMS 571 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 E++ +++RL+G P G LT A+ P V+L DE+EKAHP VF+ LLQ + Sbjct: 572 EFVTSSSITRLLGRPGA-----PDGELTTALRTQPFCVVLFDEVEKAHPRVFDALLQFLG 626 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA--MEEIKKIFTPEF 640 G LTD GR D R V+V+T+N GVRE + G +S DA + ++ F PEF Sbjct: 627 EGRLTDGAGRTVDARQSVVVLTSNLGVREAATHT-GFHRAADSADAHYLSAVRAWFRPEF 685 Query: 641 RNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRA 698 NRLD ++ F L+ + VVD + L + + Q V +EV + L E+ YD Sbjct: 686 FNRLDRVVPFRPLTPAALRVVVDLALEALLSRHGIRQGNVLVEVEPRLLDLLVEEAYDPR 745 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 GARP+ R ++ L PLA+ L+ S D +V + D ++ Sbjct: 746 YGARPLKRALEKRLTLPLAHHLVRRSADDLARVELLRDGNDMRVSVEV 793 >UniRef50_UPI00016C3DF7 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DF7 Length = 1108 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 171/597 (28%), Positives = 287/597 (48%), Gaps = 30/597 (5%) Query: 161 EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 E G + L +D + R++E+ ++L + LL G VGK Sbjct: 186 ETGDGATELRRVGRCL-DWLYPDELDRAVLRDREVNELHRLLELGDRRPVLLCGPRLVGK 244 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 280 +AI +R V + + L++G Y G +E R A+LK ++ + Sbjct: 245 SAIVHECVYRRVAERKANQRQWFNTWLVSPQRLISGMSYVGQWEGRLLAILKHAKKR-DH 303 Query: 281 ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR 340 +L+ D++ + AG S + AA ++KP L +RV+ T + + E+DR L+ Sbjct: 304 VLYFDDLLGLFLAGVTSQSSLSAAVVLKPYLERRDVRVLAEITPESLRVLQERDRGLSDL 363 Query: 341 FQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 F I + +P+ +T++++ + + E H + + A ++ +Y P KA Sbjct: 364 FHIIPVRQPTDADTLRVLVDQQRRLEGKHACVFGLDVLPAVIDQQRRYDRTAAFPGKAAA 423 Query: 401 VIDEAGARARLMPVS------------------KRKKTVNVADIESVVARIARIPEKSVS 442 V+ RA P + + D+ + A + + + Sbjct: 424 VLTRLAVRATTNPDERAAEVGSSATRPADGYEFPPRPEITRDDVLNDFAARSGLSLAFLD 483 Query: 443 QSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKT 502 R + D+L+ V GQ A++AL + + +A+A L +P+ +FLF GPTGVGKT Sbjct: 484 PKQRLDRDAVRDKLQEQVIGQPDAVDALADVVSVAKARLNDPDRPLAAFLFLGPTGVGKT 543 Query: 503 EVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHA 559 E +++ L LLRFD++EY + +RL+G GLLT A+ + P A Sbjct: 544 ECAKAIARTLFGDSDRLLRFDLNEYNQPGAAARLVGTF-----QQPEGLLTSAIRRQPFA 598 Query: 560 VLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL 619 V+LLDEIEKA P+VF++LLQ++ G LTD+ GR ADF + +++MT+N GVR+ E + Sbjct: 599 VVLLDEIEKADPEVFDLLLQLLGEGRLTDSLGRTADFTSALVLMTSNLGVRDAEGNLGFV 658 Query: 620 IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKG 677 D S +K F PEF NRLD +I F LS + + ++ + + E+ + Q+ Sbjct: 659 TEADRSFAYTRAAEKFFRPEFFNRLDRVIPFRKLSREEMARIARRLVGEVLAREGFSQRK 718 Query: 678 VSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 L V+ +A + + + GYD A+GAR M R ++ L +P A+ L ++ D VTV Sbjct: 719 CVLNVAPDALDRVIQAGYDPALGARAMKRAVEHELTQPAASRLAALAVNDLTIVTVR 775 >UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organisms RepID=CLPB_CORDI Length = 849 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 174/460 (37%), Positives = 251/460 (54%), Gaps = 16/460 (3%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREA--LEACSVDLVALRQELEA 60 + + +L A +A + + EHLL A+L L A VD +R+E EA Sbjct: 7 TTKTQEALQEALQKASAAGNPDIRPEHLLAAILGQEDGIAIPVLRATGVDPDVVRREAEA 66 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + + VL A G V+ VL+A + + A Sbjct: 67 LVAKLPKA--EGANLANPNFNRDALSVLNNAQELAGELGDEYVSTE-VLLAAVARGTNDA 123 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A LL K + DV+ + R ++ + P Q + +E ++T+L A Sbjct: 124 AELLTKRGATY-DVIKGVFPSVRGNKKVTTESPEDQFQA---------LEKYSTDLTARA 173 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G IDP+IGR++E+ R +QVL RR KNNP+L+GE GVGKTAI EGLA RIV GDVPE + Sbjct: 174 REGKIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESL 233 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASGG 299 T+ SLD+GS++AG KYRG+FE+R KA+L +++ + I FIDE+HTI+GAGA Sbjct: 234 KGKTLISLDLGSMVAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDS 293 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA N+IKPLL+ G++R++G+TT E+ EKD AL RRFQ++ + EPS+E+ V I+ Sbjct: 294 AMDAGNMIKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAVGILR 353 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLK +YE HH VR A+ AA L+ +YI R LPDKAID++DEA +R R+ S ++ Sbjct: 354 GLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQE 413 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 + I + K + +D L L L Sbjct: 414 IDELERIVRRLEIEEVALSKETDAASKDRLIKLRQELADE 453 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 218/805 (27%), Positives = 350/805 (43%), Gaps = 102/805 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP-SAREALEACSVDLVALR----- 55 N++ LN A A E E+++ E LL A+ A E L ++ Sbjct: 84 FNRDALSVLNNAQELAGELGDEYVSTEVLLAAVARGTNDAAELLTKRGATYDVIKGVFPS 143 Query: 56 ----------------QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQS-- 97 Q LE + T + + +RV+Q ++ Sbjct: 144 VRGNKKVTTESPEDQFQALEKYSTDLTARAREGKIDPVIGRDQEIRRVVQVLSRRTKNNP 203 Query: 98 --SGRNEVTGANVLVAIFSE-QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPG 154 G V ++ + L+ + LD+ + ++ + E + Sbjct: 204 VLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLISLDLGSMVAGAKYRGEFEERLKAV 263 Query: 155 SQPNSEEQAGGEERMENFTTNL-------NQLARVGGIDPLIGRE----------KELER 197 + ++ T + + + I PL+ R E + Sbjct: 264 LDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNMIKPLLARGELRLVGATTLDEYRK 323 Query: 198 AIQ---VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG--DVPEVMADCTIYSLDIGS 252 I+ L RR + + VGE V E A I++G + EV I + Sbjct: 324 YIEKDAALERRFQQ--VFVGEPSV------ED-AVGILRGLKERYEVHHGVRIQD---SA 371 Query: 253 LLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS 312 L+A + +I +DE + + ++D++ P Sbjct: 372 LVAAAT-------LSDRYITSRFLPDKAIDLVDEAASRLRM------EIDSS----PQEI 414 Query: 313 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII----NGLKPKYEAH 368 R++ +E + E D A R K+ E + + N K Sbjct: 415 DELERIVRRLEIEEVALSKETDAASKDRLIKLRQELADEREKLGELVARWNNEKGAINKV 474 Query: 369 HDVRYTAKAVRAAVELAVK---YINDRHLPDKAIDVIDEAGARARLMPVSKRK--KTVNV 423 + + + +R+ E+A + Y L I +++ A A V + V Sbjct: 475 REAKEELERLRSESEIAERDGDYGKVAELRYGRIPELEKQVAEAEEHTVETTMLSEEVTP 534 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 I VV+ IP + Q + + L N+ L V GQ +A+ A+++A++ ARAG+ Sbjct: 535 DTIAEVVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVAD 594 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGY 540 ++P GSFLF GPTGVGKTE+ L++ + + ++R DMSEY E+H V+RL+GAPPGY Sbjct: 595 PNRPTGSFLFLGPTGVGKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARLVGAPPGY 654 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+DQGG LT+AV + P+ V+L DE+EKAHPDVF+ILLQV+D G LTD GR DFRN V Sbjct: 655 VGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTV 714 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L++T+N G + M+ +K+ F PEF NRLD+++ FD LS + + Sbjct: 715 LILTSNLGAG------------GTKDEMMDAVKRAFKPEFVNRLDDVVIFDPLSQEQLTH 762 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +V+ I +L +L + ++L VS A+ WLAE+GY+ A GARP+ R+IQ + LA +L Sbjct: 763 IVEIQIAQLAQRLAARRLTLAVSDSAKLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKL 822 Query: 721 LFGSLVDGGQVTVALDKEKNELTYG 745 L G + DG +V V D + + L Sbjct: 823 LSGEVRDGSEVHVDADLDNDGLVIS 847 Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 1/79 (1%) Query: 80 PTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFIS 139 PT Q LQ A+ ++G ++ ++L AI +++ A +LR V DVV + Sbjct: 6 PTTKTQEALQEALQKASAAGNPDIRPEHLLAAILGQEDGIAIPVLRATGVDP-DVVRREA 64 Query: 140 HGTRKDEPTQSSDPGSQPN 158 P + PN Sbjct: 65 EALVAKLPKAEGANLANPN 83 >UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FCQ4_9BIFI Length = 910 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 169/474 (35%), Positives = 262/474 (55%), Gaps = 28/474 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 L ++ A A + + V HLL ALL R +EA D A+ + Sbjct: 6 LTNMSREAITDAVQSASAAGNAQIDVLHLLNALLTQEQGVVRGLIEAAGGDAKAIGTAVR 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + QP+ F+ L ++ +Q G ++ ++L+ I + +Q Sbjct: 66 NALTNLPSA--SGSTTAQPQPSRQFEAALVQSEKEMQQMGDEYISTEHLLIGIAAAAPNQ 123 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L+ + V+ + + D S D G + +E ++T+L Sbjct: 124 AADILQANNVTAQALRAAVPTVRGGDRKVTSPD---------AEGSYKALEKYSTDLTAA 174 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G +DP+IGR++E+ R IQ+L RR KNNP+L+GE GVGKTA+ EGLA RIV GDVP Sbjct: 175 AKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTT 234 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASG 298 + + + SLD+GS++AG+KYRG+FE+R K++L++++ + I FIDEIHTI+GAGAA Sbjct: 235 LQNKKLISLDLGSMVAGSKYRGEFEERLKSVLEEIKNANGQIITFIDEIHTIVGAGAAE- 293 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA N++KP+L+ G++R+IG+TT E+ EKD AL RRFQ++ + EPS+E+T+ I+ Sbjct: 294 GSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAIL 353 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM----PV 414 G+ PKYEAHH V A+ AA L+ +YI+ R LPDKAID++DEA A R+ P Sbjct: 354 RGIAPKYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPE 413 Query: 415 SKRKKTVNVADIESVVARIARIP---------EKSVSQSDRDTLKNLGDRLKML 459 + T V ++ + + P E + S +D L +L + Sbjct: 414 EIDELTRQVERLKMEKSYLLGNPKNDKAADKAEAELDDSAKDRLADLNKEIANK 467 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 202/813 (24%), Positives = 348/813 (42%), Gaps = 105/813 (12%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALR----- 55 +++ E +L + ++ E+++ EHLL+ + + + + L+A +V ALR Sbjct: 85 SRQFEAALVQSEKEMQQMGDEYISTEHLLIGIAAAAPNQAADILQANNVTAQALRAAVPT 144 Query: 56 -----------------QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQS- 97 + LE + T + + +RV+Q ++ Sbjct: 145 VRGGDRKVTSPDAEGSYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNN 204 Query: 98 ---SGRNEVTGANVLVAIFSE-QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDP 153 G V V+ + L+ ++ LD+ + ++ + E + Sbjct: 205 PVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKS 264 Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGID------PLIGRE----------KELER 197 + ++ T + A G +D P++ R E Sbjct: 265 VLEEIKNANGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEYRE 324 Query: 198 AIQ---VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 I+ L RR + + VGE V T I++G P+ A + D +L+ Sbjct: 325 NIEKDPALERRFQQ--VFVGEPSVEDT-------IAILRGIAPKYEAHHKVTIGD-DALV 374 Query: 255 AGTKYRG------DFEKRFKALLKQLEQDTNSILF-----IDEI------------HTII 291 A + L+ + L IDE+ + + Sbjct: 375 AAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELTRQVERLKMEKSYLLG 434 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF-------QKI 344 A L + +E +N EK L R+ +I Sbjct: 435 NPKNDKAADKAEAELDDSAKDR------LADLNKEIANKSEKLNGLKARWDAEKSGHNRI 488 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + + + + +YE D+ ++ + K I ++ + Sbjct: 489 G----DLRKKLDELRTQAERYEREGDLAKSSAINYGEIPNIQKEIAQAEKNEQNVKNGSN 544 Query: 405 AGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD 464 A A +P V+ + +V+ IP + Q + + L + D L V GQ Sbjct: 545 AANTAADVP--MVPDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLTMEDYLGKRVIGQK 602 Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDM 521 +AI+A+++A++ +RAG+ ++P GSFLF GPTGVGKTE+ L+ L + ++R DM Sbjct: 603 EAIKAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDM 662 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM 581 SEYME+ +VSRLIGA PGYVG++QGG LT+AV + P++V+L DE+EKA+P++F++LLQV+ Sbjct: 663 SEYMEKASVSRLIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVL 722 Query: 582 DNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFR 641 D+G LTD GR DF+N +L+MT+N G + + + + M+ + F PEF Sbjct: 723 DDGRLTDGQGRTVDFKNTILIMTSNLGSQFLVNEDM--DDEAKRKAVMDTVHMNFKPEFL 780 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 NRLD+ + F L+ + + +VD + + +L + ++L+V+ AR WLA GYD A GA Sbjct: 781 NRLDDTVMFHPLTREELGGIVDIQVANVSARLTDRRITLDVTDSAREWLANVGYDPAYGA 840 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 RP+ R++Q + LA LL G + DG V V Sbjct: 841 RPLRRLVQTEVGDQLARMLLAGKVHDGDTVLVD 873 >UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular organisms RepID=CLPB1_SYNY3 Length = 898 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 174/451 (38%), Positives = 265/451 (58%), Gaps = 25/451 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++ ++ + AR +++ + VEH+LLALL A + +VD LRQ+LE Sbjct: 9 FTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDGEGLRQQLE 68 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 F + P S +L RA S ++ ++LV F+E + Sbjct: 69 IFTNRQ----PKQAYVEQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVG-FAEDDRV 123 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 LR + D+ I + + S ++PN EE+ E ++ + +L + Sbjct: 124 GRKTLRAFNLDPQDLELAI-------KAIRGSQKVTEPNQEEKY---EALDKYGRDLTEQ 173 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGR++E+ R IQVL RR KNNP+L+GE GVGKTAIAEGLA RI+ GDVPE Sbjct: 174 ARQGKLDPVIGRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPES 233 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASG 298 + + + SLD+GSL+AG KYRG+FE+R ++++K++ D ILFIDE+HT++GAG G Sbjct: 234 LKNRQLISLDMGSLIAGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREG 293 Query: 299 -GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DA NL+KP+L+ G++R IG+TT E+ EKD AL RRFQ++ + +PS+++T+ I Sbjct: 294 SGSMDAGNLLKPMLARGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISI 353 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + GLK KYE HH V+ T A+ AA L+ +YI DR LPDKAID++DEA AR ++ SK Sbjct: 354 LRGLKEKYEVHHGVKITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLKMEITSKP 413 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDT 448 + +E + R+ ++ + +S + Sbjct: 414 VE------LEDIDRRLMQLQMEKLSLEGEEK 438 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 139/355 (39%), Positives = 210/355 (59%), Gaps = 6/355 (1%) Query: 408 RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 + + ++ V +DI +VA IP + +++R L L L V GQ +A+ Sbjct: 533 EIQGSGNTLLREQVTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAV 592 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEY 524 A++ AI+ ARAG+ +P+GSFLF GPTGVGKTE+ L+ L ++R DMSEY Sbjct: 593 AAVSAAIRRARAGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEY 652 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 ME+H VSRLIGAPPGYVG+++GG L++AV + P++V+LLDE+EKAH DVFNILLQV+D+G Sbjct: 653 MEKHAVSRLIGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDG 712 Query: 585 TLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS-TDAMEEIKKIFTPEFRNR 643 +TD+ GR DFRN ++VMT+N G S D ++ ++K F PEF NR Sbjct: 713 RITDSQGRVVDFRNTIIVMTSNIGSDHILSLSADDADYDKMQKQVLQSLRKHFRPEFLNR 772 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 +D++I F L D + ++V I ++ LD++ ++L +S A + + GYD GARP Sbjct: 773 IDDLIIFHTLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARP 832 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 + R IQ L+ P+A ++L + V G ++ + +L + + E Sbjct: 833 LKRAIQRQLENPIATKILENTFVAGDKILIDCV--DGQLIFDKEIEPTTLPEEPE 885 >UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organisms RepID=CLPB_CHLCV Length = 864 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 175/492 (35%), Positives = 276/492 (56%), Gaps = 25/492 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 ++ + +L AF A+ ++ +++ H L LL N + D+ + L + Sbjct: 4 ISDAVSEALEKAFELAQSAKNPYVSENHFLKCLLENTES--LFYLIIKDIHNNPKLLTSA 61 Query: 62 IEQTTPVLPAS-EEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +++ + P+ E +P+ Q +L A + G ++G +VL+A + + Sbjct: 62 VDEALSLEPSVIEGSAMPKPSPGLQSLLLDAKQEAKDLGDEYLSGDHVLLAFWKSNKEPF 121 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A + ++S D+ I + R G++ +S +E + NL LA Sbjct: 122 ASWKKTVKISLDDLKKLIINIRR----------GNRMDSPSAENNLRGLEKYCKNLTLLA 171 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G +DP+IGR++E+ R +QVL RR KNNP+L+GE GVGKTAIAEGLA RIVQGD+PE + Sbjct: 172 KEGKLDPVIGRDEEIRRTVQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRIVQGDIPESL 231 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGG 299 +Y LD+G+L+AG KYRG+FE+R K++LK +E D SILFIDE+HT++GAGA G Sbjct: 232 KGKQLYVLDMGALIAGAKYRGEFEERLKSVLKDVESVDGESILFIDEVHTLVGAGATDGA 291 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAANL+KP L+ G + IG+TT E+ EKD AL RRFQ I +TEPS+E+ V I+ Sbjct: 292 -MDAANLLKPALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILR 350 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM------P 413 GL+ KYE H VR T A+ AAV L+ +YI DR LPDKAID+IDEA + R+ P Sbjct: 351 GLREKYEIFHGVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPLP 410 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDR-DTLKNLGDRLKM-LVFGQDKAIEALT 471 + ++++ + ++ + + P + +++ L + L + ++ + L Sbjct: 411 IDEKERELAALIVKQEAIKREKAPSYQEEAAAMQQSIEQLKEELAALRLRWDEE--KKLI 468 Query: 472 EAIKMARAGLGH 483 +K + L + Sbjct: 469 TGLKEKKNSLEN 480 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 198/805 (24%), Positives = 348/805 (43%), Gaps = 100/805 (12%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELEA 60 + L+ L A A++ E+++ +H+LLA + + + L L++ + Sbjct: 82 SPGLQSLLLDAKQEAKDLGDEYLSGDHVLLAFWKSNKEPFASWKKTVKISLDDLKKLIIN 141 Query: 61 F-----------------IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS----- 98 +E+ L +E P + ++R V + Sbjct: 142 IRRGNRMDSPSAENNLRGLEKYCKNLTLLAKEGKLDPVIGRDEEIRRTVQVLSRRTKNNP 201 Query: 99 ---GRNEVTGANVLVAI-FSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPG 154 G V + + + L+ ++ LD+ I+ + E + Sbjct: 202 MLIGEPGVGKTAIAEGLALRIVQGDIPESLKGKQLYVLDMGALIAGAKYRGEFEERLKSV 261 Query: 155 SQPNSEEQAGGEERMENFTTNLNQLARVGGID------PLIGRE----------KELERA 198 + ++ T + A G +D P + R E ++ Sbjct: 262 LKDVESVDGESILFIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGATTLNEYQKY 321 Query: 199 IQ---VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG--DVPEVMADCTIYS--LDIG 251 I+ L RR + P+ V E E A I++G + E+ I L+ Sbjct: 322 IEKDAALERRFQ--PIFVTEPS------LED-AVFILRGLREKYEIFHGVRITEGALNAA 372 Query: 252 SLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS-------GGQVDAA 304 LL YR + +I IDE ++I S + AA Sbjct: 373 VLL---SYR---------YIPDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERELAA 420 Query: 305 NLIKP-LLSSGK---IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 ++K + K + + Q + E+ AL R+ +E ++I G Sbjct: 421 LIVKQEAIKREKAPSYQEEAAAMQQSIEQLKEELAALRLRW----------DEEKKLITG 470 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 LK K + +++++ + + L + I E ++ Sbjct: 471 LKEKKNSLENMKFSEEEAERVADYNRVAELRYSLIPALEEEIREDEEALNQRDNRLLQEE 530 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ I VVA IP + + + + + L L + L+ V GQ AI A++++I+ AR G Sbjct: 531 VDERLIAQVVANWTGIPIQKMLEGEAEKLLVLEESLEERVVGQPFAISAVSDSIRAARVG 590 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAP 537 L +P+G FLF GPTGVGKTE+ L+ L + ++RFDM+EYME+H+VS+LIG+P Sbjct: 591 LSDPQRPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMTEYMEKHSVSKLIGSP 650 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GG L++A+ + P++V+L DEIEKA +VFNILLQ+ D G LTD+ RK + + Sbjct: 651 PGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDEGILTDSKKRKVNCK 710 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAME----EIKKIFTPEFRNRLDNIIWFDHL 653 N + +MT+N G +E + + + +KK F+PEF NR+D+I+ F L Sbjct: 711 NALFIMTSNIGSQELADYCAKKGSRVSKETVLSVVAPTLKKYFSPEFINRIDDILPFVPL 770 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 +T+ I ++V + + +L ++ V+L +L+E+GYD + GARP+ R+IQ + Sbjct: 771 NTEDIVKIVGIQMRRVAQRLLERRVTLTWDDSVILYLSEQGYDSSFGARPLKRLIQQKVV 830 Query: 714 KPLANELLFGSLVDGGQVTVALDKE 738 L+ LL G + + + + K+ Sbjct: 831 TLLSKALLKGDIKSDTSIELTMSKD 855 >UniRef50_Q7YN63 Clp protease ATP-binding subunit n=5 Tax=Apicomplexa RepID=Q7YN63_EIMTE Length = 741 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 207/771 (26%), Positives = 364/771 (47%), Gaps = 65/771 (8%) Query: 3 NQELELSLNMAFARAREHRHEF----MTVEHLLLALLSNPSAREALEACSVDLVALRQEL 58 +E+ L A A + + HL L+L+ N + + +++ L Q++ Sbjct: 14 TKEVIYCLEEAKKIAILTNSKSELIIIKPIHLCLSLIFNSKLIQKI--LNINYSILNQKI 71 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 I + S + + L + T +L+ Sbjct: 72 IXNIIFNYNFIDISNLNKKLDKVYYLDKNLLLIFNILNILEYPFNT---LLL-------- 120 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 Y L K + + ++I + N E +++F LN+ Sbjct: 121 --FYYLCKQNI---KLYSYIFSILNINNINFILIKNYINNFLPNINIPEVLKDFLNILNK 175 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 LIGR+KE++ I++L R+ N +L+G G+GK +I E L + I Sbjct: 176 RNN------LIGRDKEIKNIIEILXRKLNRNIILLGNIGIGKLSIVEKLVYLIP------ 223 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + L+I +L++ + K L L++ N IL+ + H + + Sbjct: 224 ---NKIFLELNITNLISQSNN----INIIKNLFNFLKKYNNIILYCKDFHLLFNNSNTTT 276 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 N+I LL KI++I +++ + I + + L F KI+I E + I+ Sbjct: 277 DLTYIKNIIYELLFLNKIQIIATSSENYYDKILKNEEKLKFLFAKINILELNKNILFLIM 336 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 K ++ + ++L+ KYI D P ++D + + K K Sbjct: 337 ---KQYLIKNNINWINDNILEIIIDLSKKYIKDYAFPKIGFLILD-----SIINKYIKIK 388 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD--RLKMLVFGQDKAIEALTEAIKM 476 K ++ DI +++++ ++ P + + +T+ +LK V+GQD AI ++ ++K Sbjct: 389 KNISKKDIIAIISQYSKFPNTLLLKETNNTIIINNIDLKLKKYVYGQDIAITKISSSLKR 448 Query: 477 ARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRL 533 A GL ++KP+GS+L GP+G GKTE+ L+ L EL+RFDMSE+ME+H++S+L Sbjct: 449 AYTGLKEQNKPIGSWLLCGPSGTGKTELVKSLAYLLFGSEKELIRFDMSEFMEKHSISKL 508 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 IG+PPGYVG ++GGLLT+AV K P++V+L DEIEKAH D+ NI+LQ++D GTLTD+ G Sbjct: 509 IGSPPGYVGCEEGGLLTEAVKKKPYSVILFDEIEKAHKDINNIMLQLLDEGTLTDSKGEH 568 Query: 594 ADFRNVVLVMTTNAGVRETERKSIGLIHQDN---------STDAMEEIKKIFTPEFRNRL 644 DF N +++ T+N G + + + + S + +KK F PEF NRL Sbjct: 569 IDFTNTLIIYTSNLGCPTSSVQFKSFQNGEELSEKEYKFLSKNVDIAVKKFFKPEFLNRL 628 Query: 645 DNIIWFDHLSTDVIHQVVDKFI--VELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 D+II F LS + +++KFI + +Q + + +E+ ++ + LA+ Y+ GAR Sbjct: 629 DSIIVFKPLSILCLINIINKFIFNLNKNLQNNNILLQVELEEDIKILLAKLAYNPLYGAR 688 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHK 753 P+ R+IQ ++KP++ ++ + ++ +KEKN ++Y Q K Sbjct: 689 PLKRIIQQFIEKPISEIIINFNFKLPHLFSIFNNKEKNIISYLIQKINNIK 739 >UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. SE45 RepID=D0D9L8_9RHOB Length = 864 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 180/531 (33%), Positives = 278/531 (52%), Gaps = 33/531 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + A A H+ + EHLL AL+ + A + + + LE Sbjct: 6 FTERSRGFIQAAQTIAMRDNHQRLVPEHLLKALMDDEQGLASNLITRAGGQPPRVVEVLE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + V S + + RVL A + +G + V +L A+ E +S Sbjct: 66 QKLSKIPRV---SGDAGQVYLDPATARVLDEAEKIAKKAGDSFVPVERILTALAIE-KSG 121 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A L ++ + I+ + G +S G + ++ + +L + Sbjct: 122 AKEALEAGNLTPQRLNEAINDLRK----------GRTADSASAEEGYDALKKYARDLTEA 171 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G IDP+IGR++E+ R++QVL RR KNNP+L+GE GVGKTAIAEGLA RI+ GDVPE Sbjct: 172 AEQGRIDPIIGRDEEIRRSMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIDGDVPES 231 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASG 298 + + + +LD+G+L+AG KYRG+FE+R K++LK++E ILFIDE+HT++GAG G Sbjct: 232 LRNKRLMALDMGALIAGAKYRGEFEERLKSILKEIESAAGEIILFIDEMHTLVGAGKTDG 291 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA+NL+KP L+ G++ +G+TT E+ EKD ALARRFQ + + EP++E+T+ I+ Sbjct: 292 A-MDASNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVMVQEPTVEDTISIL 350 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 G+K KYE HH VR + A+ AA L+ +YI DR LPDKAID++DEA +R R+ SK + Sbjct: 351 RGIKEKYELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPE 410 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL------KMLVFGQDKA------ 466 + + + + + +D L+ L L + Q +A Sbjct: 411 ELDQLDRNILQMQIEVEALKLEDDAASKDRLEKLEKELADLEEKSAEMTAQWQAERDKLA 470 Query: 467 -IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKT-EVTVQLSKALGIE 515 L E + RA L + G+F AG GK E+ +L++A E Sbjct: 471 SARDLKEQLDRLRAELEIAKR-EGNFAKAGELQYGKIPEIEKKLAEAEAAE 520 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 174/676 (25%), Positives = 289/676 (42%), Gaps = 88/676 (13%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLAL-LSNPSAREALEACSVDLVALRQELEA 60 L+ L+ A A++ F+ VE +L AL + A+EALEA ++ L + + Sbjct: 83 LDPATARVLDEAEKIAKKAGDSFVPVERILTALAIEKSGAKEALEAGNLTPQRLNEAIND 142 Query: 61 FIEQTTPVLPASEEERD-----------------TQPTLSFQRVLQRAVFHVQSSGRN-- 101 + T ++EE D P + ++R++ + +N Sbjct: 143 LRKGRTADSASAEEGYDALKKYARDLTEAAEQGRIDPIIGRDEEIRRSMQVLSRRTKNNP 202 Query: 102 ----------EVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSS 151 + + I ++ R + ++ + +E +S Sbjct: 203 VLIGEPGVGKTAIAEGLALRIIDGDVPESLRNKRLMALDMGALIAGAKYRGEFEERLKSI 262 Query: 152 DPGSQPNSEEQAGGEERMENF-TTNLNQLARV--GGIDPLIGRE----------KELERA 198 + + E + M A + P + R E + Sbjct: 263 LKEIESAAGEIILFIDEMHTLVGAGKTDGAMDASNLLKPALARGELHCVGATTLDEYRKH 322 Query: 199 IQ---VLCRRRKNNPLLVGESGVGKT-AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 ++ L RR + P++V E V T +I G+ + E+ I +L+ Sbjct: 323 VEKDPALARRFQ--PVMVQEPTVEDTISILRGI------KEKYELHHGVRI---SDSALV 371 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 A + +I +DE + + S KP Sbjct: 372 AAAT-------LSHRYITDRFLPDKAIDLMDEAASRLRMEVDS----------KPEELDQ 414 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKID-----ITEPSIEETVQIINGLKPKYEAHH 369 R I + + E D A R +K++ + E S E T Q + K + Sbjct: 415 LDRNILQMQIEVEALKLEDDAASKDRLEKLEKELADLEEKSAEMTAQW-QAERDKLASAR 473 Query: 370 DVRYTAKAVRAAVELAVK---YINDRHLPDKAIDVIDEAGARARLMPVS-KRKKTVNVAD 425 D++ +RA +E+A + + L I I++ A A ++ V Sbjct: 474 DLKEQLDRLRAELEIAKREGNFAKAGELQYGKIPEIEKKLAEAEAAEGDVMVEEAVRPEQ 533 Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VV R IP + + +R+ L + D L V GQ++A++A+ A++ ARAGL E+ Sbjct: 534 IAEVVERWTGIPTSKMLEGEREKLLRMEDGLHKRVVGQNQAVKAVANAVRRARAGLNDEN 593 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+GSFLF GPTGVGKTE+T +++ L + ++R DMSE+ME+H+V+RLIGAPPGYVG Sbjct: 594 RPLGSFLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVG 653 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 +D+GG+LT+AV + P+ V+L DE+EKAHPDVFN+LLQV+D+G LTD GR DF+ ++V Sbjct: 654 YDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIV 713 Query: 603 MTTNAGVRETERKSIG 618 +T+ G Sbjct: 714 LTSTLARSAVAASRGG 729 >UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms RepID=B5Y5I5_PHATR Length = 997 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 157/422 (37%), Positives = 249/422 (59%), Gaps = 17/422 (4%) Query: 39 SAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS 98 + L V+L LR EL+ ++ + P + + + Q+VL+ A Q+ Sbjct: 141 VVEKILNKAGVNLNRLRCELDEYLAKQ----PRVSDPTNKIMGRTLQKVLETARNGKQAL 196 Query: 99 GRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPN 158 G + V+ +++A+ E + L + V DV+ + +K P S S + Sbjct: 197 GDSYVSTEGLVLAMVKEDDKFTREALMRQNVKYTDVLEVVKEMRKKSGPAISRSAESMYD 256 Query: 159 SEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV 218 + + + +L + A G +DP+IGR+ E+ RAIQ+L RR KNNP+L+G+ GV Sbjct: 257 A---------LTKYGVDLTERAEQGKLDPVIGRDDEIRRAIQILSRRTKNNPVLIGDPGV 307 Query: 219 GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQD 277 GKTAIAEG+A R++ GDVP+ + +C + LD+G+L+AG RG FE+R KA+++++ + D Sbjct: 308 GKTAIAEGIAQRMIDGDVPDSLKNCRLIGLDMGALVAGASMRGQFEERLKAVVEEVTQSD 367 Query: 278 TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRAL 337 ILFIDE+HT++GAGAA G +DA+NL+KP L+ G++R IG+TT E+ EKD+AL Sbjct: 368 GEIILFIDEMHTVVGAGAAQ-GSMDASNLLKPALARGQLRCIGATTINEYRKYIEKDKAL 426 Query: 338 ARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDK 397 RRFQ++ I +P+ E+TV I+ GLKP+YE HH VR +A+ AA +L+ +YI DR LPDK Sbjct: 427 ERRFQQVMIDQPTPEDTVSILRGLKPRYELHHGVRIRDEALLAAAKLSHRYIPDRFLPDK 486 Query: 398 AIDVIDEAGARARLMPVSKRK--KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 AID++DEA A+ SK ++ I+ + R++ + + D +T K + Sbjct: 487 AIDLVDEACAKLNNEITSKPTILDEIDRRIIQLEMERLSLQSDFEKYEEDGNTFKATSEN 546 Query: 456 LK 457 + Sbjct: 547 FR 548 Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 204/809 (25%), Positives = 356/809 (44%), Gaps = 87/809 (10%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQEL 58 ++ + L+ L A + +++ E L+LA++ REAL +V + + + Sbjct: 177 IMGRTLQKVLETARNGKQALGDSYVSTEGLVLAMVKEDDKFTREALMRQNVKYTDVLEVV 236 Query: 59 EAFIEQTTPVLPASEEE------------------RDTQPTLSFQRVLQRAVFHVQSS-- 98 + +++ P + S E P + ++RA+ + Sbjct: 237 KEMRKKSGPAISRSAESMYDALTKYGVDLTERAEQGKLDPVIGRDDEIRRAIQILSRRTK 296 Query: 99 ------GRNEVTGANVLVAIFSEQ-ESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSS 151 G V + I + L+ + LD+ ++ + + + + Sbjct: 297 NNPVLIGDPGVGKTAIAEGIAQRMIDGDVPDSLKNCRLIGLDMGALVAGASMRGQFEERL 356 Query: 152 DPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPL 211 + ++ ++ T + A G +D L R + Sbjct: 357 KAVVEEVTQSDGEIILFIDEMHTVVGAGAAQGSMDAS-------NLLKPALARGQLRCI- 408 Query: 212 LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS-----LDIGSLLAGTKYRGDFEK- 265 G T I E + ++ D + D S+L G K R + Sbjct: 409 -------GATTINEY--RKYIEKDKALERRFQQVMIDQPTPEDTVSILRGLKPRYELHHG 459 Query: 266 ---RFKALLKQLEQDTNSI--LFIDE--IHTIIGAGAASGGQVDAANLIKPLLSSGKIRV 318 R +ALL + I F+ + I + A A ++ + I + I++ Sbjct: 460 VRIRDEALLAAAKLSHRYIPDRFLPDKAIDLVDEACAKLNNEITSKPTILDEIDRRIIQL 519 Query: 319 IGS-----TTYQEFSNIFEKDRALARRFQKIDITEP-----SIEETVQI--------ING 360 + ++++ +A + F+ I E ++ + + ++ Sbjct: 520 EMERLSLQSDFEKYEEDGNTFKATSENFRLAKIDEELGSLKYEQQELNMKWMAEKGAVDR 579 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAV----KYINDRHLPDKAIDVIDEAGARARLMPVSK 416 LK E V+ + +L KY + L + ++ + Sbjct: 580 LKDVKEKIAKVKLDIEKFEREFDLNKAAELKYSDLPPLERELEELENIGQYDLGPGEERM 639 Query: 417 RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM 476 + V DI VVA IP + +S+RD + +GD+L+ + GQD+AI +TEA++ Sbjct: 640 LRDEVVADDIAGVVAVWTGIPPGKLLESERDRILTMGDKLRERLIGQDEAIRVVTEAVQR 699 Query: 477 ARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRL 533 +RAGL KP+ S +F GPTGVGKTE L++ + L+R DMSEYME+HTVSRL Sbjct: 700 SRAGLNDPSKPIASLIFLGPTGVGKTECAKALAEFMFDSEDALIRIDMSEYMEKHTVSRL 759 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 +GAPPGYVG+D+GG LTDA+ + P+AVLL DE+EKAHPDVFN++LQ++D+G LTD+ G Sbjct: 760 LGAPPGYVGYDEGGQLTDAIRRRPYAVLLFDEMEKAHPDVFNVMLQLLDDGRLTDSKGNT 819 Query: 594 ADFRNVVLVMTTNAGVRETERKSIGLIHQDNS---TDAMEEIKKIFTPEFRNRLDNIIWF 650 +FRN + + T+N G +E + D + E +++ F PEF NR+D + F Sbjct: 820 VNFRNTICIFTSNVGSQEILDLNGSSEIGDQEIMRSRVTEAMRERFRPEFLNRIDEHVIF 879 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 + L+ + + +V + L+ +L++K + L + +EA ++LAE G+D GARP+ R IQ Sbjct: 880 NSLNKNNLRGIVVLEVRRLEKRLEEKQMRLVLREEALDFLAEVGFDPVYGARPLKRTIQR 939 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEK 739 L+ +A +L G VDG + V + E+ Sbjct: 940 ELETVVARGILGGEFVDGDTILVDVVNER 968 >UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=CLPB_RHOBA Length = 881 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 167/460 (36%), Positives = 256/460 (55%), Gaps = 19/460 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 L + + + A A+A + + H+L A ++ LE +VD+ L+ L Sbjct: 8 LTTQAQNVVAEAQAQATSAGNAEIDPLHVLSAAVNQRDGITTPLLEKINVDVPKLKSLLT 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + +E+ LP + + + Q L+ + +S V+ ++LV + +++ Sbjct: 68 SELEK----LPHASGMGQARVSAKLQAALEASATSAESLKDEYVSTEHLLVGLAR-TDNK 122 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A LL VS D++ +S ++ + +E F +L QL Sbjct: 123 AKNLLSLLGVSDNDLLTAMSQ----------IRGSARVTDPNAESTYQALEKFGIDLTQL 172 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G +DP+IGR+ E+ R IQVL RR KNNP+L+G+ GVGKTAIAEGLA RI +GDVP+ Sbjct: 173 AQSGKLDPVIGRDNEIRRVIQVLSRRTKNNPVLIGQPGVGKTAIAEGLALRIFEGDVPQS 232 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASG 298 + + SLD+G+L+AG K+RGDFE+R K++L++++ D ILFIDE+H ++GAG A Sbjct: 233 LKGKKVVSLDMGALVAGAKFRGDFEERLKSVLREVKDSDGKVILFIDELHLVVGAGNAE- 291 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G DAANL+KP L+ G +R IG+TT E+ EKD AL RRFQ + + EP++E+TV I+ Sbjct: 292 GSADAANLLKPELARGALRCIGATTLDEYRQHIEKDAALERRFQPVFVGEPNVEDTVAIL 351 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLKP+YE+HH VR T A+ AA L+ +YI DR LPDKAID+IDEA +R + S + Sbjct: 352 RGLKPRYESHHGVRITDSALVAAANLSDRYIADRFLPDKAIDLIDEAASRLAMEKESVPE 411 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 + + + R S D + + ++ Sbjct: 412 PIDRLQRRLRQLELVHRQLVDEQEASAVDKRVEVEEEMES 451 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 208/819 (25%), Positives = 370/819 (45%), Gaps = 99/819 (12%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSV------------ 49 + +L+ +L + A + E+++ EHLL+ L + A+ L V Sbjct: 85 SAKLQAALEASATSAESLKDEYVSTEHLLVGLARTDNKAKNLLSLLGVSDNDLLTAMSQI 144 Query: 50 ---------DLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS-- 98 + + Q LE F T + + + + +RV+Q +++ Sbjct: 145 RGSARVTDPNAESTYQALEKFGIDLTQLAQSGKLDPVIGRDNEIRRVIQVLSRRTKNNPV 204 Query: 99 -------GRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSS 151 G+ + + + IF Q+ L+ +V LD+ ++ + + + Sbjct: 205 LIGQPGVGKTAIA-EGLALRIFEGDVPQS---LKGKKVVSLDMGALVAGAKFRGDFEERL 260 Query: 152 DPGSQPNSEEQAGGEERMENFTTNLNQLARVGG------IDPLIGRE----------KEL 195 + + ++ + G + P + R E Sbjct: 261 KSVLREVKDSDGKVILFIDELHLVVGAGNAEGSADAANLLKPELARGALRCIGATTLDEY 320 Query: 196 ERAIQ---VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS 252 + I+ L RR + P+ VGE V T I++G P + + D + Sbjct: 321 RQHIEKDAALERRFQ--PVFVGEPNVEDTV-------AILRGLKPRYESHHGVRITD-SA 370 Query: 253 LLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHT-IIGAGAASGGQVD-AANLIKPL 310 L+A + +I IDE + + + +D ++ L Sbjct: 371 LVAAA-------NLSDRYIADRFLPDKAIDLIDEAASRLAMEKESVPEPIDRLQRRLRQL 423 Query: 311 -LSSGKIRVIGSTT--------YQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 L ++ + +E + + +L +++ + ++ Q ++ L Sbjct: 424 ELVHRQLVDEQEASAVDKRVEVEEEMESAKAELASLKEQWETEKMGLDDVQSVRQEVDQL 483 Query: 362 KPKY--------EAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI---DVIDEAGARAR 410 + ++ E A +++ + + D+A D D+ Sbjct: 484 QHRFAQLDADAKEKQLRGESPEDAYSEMLQVQSRLRELQARIDEAEKHDDSADQTKEEPG 543 Query: 411 LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 +K V +I VV+ +P + +++R L + +RL V GQD+A+ A+ Sbjct: 544 DEKRRLLRKEVTEEEIAEVVSTWTGVPVTRMMETERAKLLVMEERLHQRVVGQDEAVTAV 603 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMER 527 ++A++ +R+GL ++P+GSFLF GPTGVGKTE+ L++ + + ++R DMSE+MER Sbjct: 604 SDAVRRSRSGLQDPNRPIGSFLFLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEFMER 663 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 H+VSRLIGAPPGYVG+++GG LT+AV + P+AV+LLDE+EKAHPDVFN+LLQV+D+G LT Sbjct: 664 HSVSRLIGAPPGYVGYEEGGKLTEAVRRRPYAVILLDEMEKAHPDVFNVLLQVLDDGRLT 723 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAME-EIKKIFTPEFRNRLDN 646 D GR +F N V+VMT+N G + +R + +D A+E +K F PEF NR+D+ Sbjct: 724 DGQGRTVNFTNTVVVMTSNVGSQVIQRVTEEGGGEDEMRQAVEDALKARFLPEFLNRIDD 783 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 + F L I ++V + EL+ +L G+S E++ A + +AE GYD A GARP+ R Sbjct: 784 TVIFHPLQQTQIRRIVQLQLEELRSRLAANGLSFEITDAAIDQIAEVGYDPAYGARPLKR 843 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 VIQ ++ PLA+ +L S +G + + D + ++ + Sbjct: 844 VIQREVQNPLASAILKNSYAEGTTIKI--DHDGDQFVFS 880 >UniRef50_A8RF26 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RF26_9FIRM Length = 682 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 176/676 (26%), Positives = 318/676 (47%), Gaps = 67/676 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 ++Q+++ L A AR+ + ++ EH+LLAL+ + L + + L+++L Sbjct: 34 MDQQVKALLECAKQEARDMGNNYIGSEHILLALMKDIHTPLSRILSSQGMYYFQLKEDLM 93 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + Q T + ++ A + + +++ V +A+ Sbjct: 94 ILFG------LKDQSIGEIQMTQIVENMMGAAEKLAEERNQRQLSVEVVSIALLKSGSCV 147 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A +L ++++ ++ + +G ++ ++ N Sbjct: 148 ANEILHRYDLDEEVLLLQLENGL-----------------------ISELDKYSELRNLN 184 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 G D ++GR++EL+ + VL R+ K NPLLVGE+GVGKTA+ E LA I + + Sbjct: 185 RTEGYAD-IVGRKEELDFMVSVLLRKDKANPLLVGEAGVGKTALVEQLARDIRYKKI-KG 242 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D IY L++ +L+AGTKYRGDFE++ + +++ L++ ILFIDEIH +IGAG + G Sbjct: 243 LEDTQIYELNLNALVAGTKYRGDFEEKLQKIIRLLQKYPEVILFIDEIHQMIGAGKSE-G 301 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D A+++KP L+ G IR IG+TT +E+ EKDRAL RRFQ I I EPS+E+ ++ Sbjct: 302 SIDVASVLKPYLARGSIRCIGATTLEEYEKYIEKDRALERRFQIIHIQEPSLEQVYTMLE 361 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 + +YE+ H V +A+R V YI R PDKAIDV+D A + +++ Sbjct: 362 AKQKEYESFHHVSVCEEALRCIVHYCNCYIPQRKFPDKAIDVLDLACVETK----KQQQT 417 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 V+ I+ V+ ++ IP S ++ + + L+ V GQ + L + + Sbjct: 418 NVDKIMIQKVIEQLTDIPLVSYNRFHY-----VKEELQKRVIGQSTVVAKLLKQLAWIEQ 472 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPG 539 G+ + KP+G +LF G VGK V ++ F E +E + + G Sbjct: 473 GVLTD-KPLGVWLFLGNAHVGKEYVIDVFNRCY------FHCEERVEINAI--------G 517 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 G + L+ + + P++++ + + A+ Q G + N +K D R+ Sbjct: 518 MEGTLEHALV--KLRRKPYSLVQISNLHLANEATLLFFQQAFQKGYIWHGN-QKVDLRHS 574 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 ++++ + + T+ + QD +KK F +D I F L + Sbjct: 575 IVILQGDFDI--TQENILHFQPQDPYIG----LKKCLGEAFLEVIDEIFLFADLQVEDKI 628 Query: 660 QVVDKFIVELQVQLDQ 675 Q+V + + + + L Sbjct: 629 QIVKEIVRKWNIPLQD 644 >UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales RepID=CLPB_WOLPM Length = 853 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 155/459 (33%), Positives = 263/459 (57%), Gaps = 16/459 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 ++ + + A +A H+ EHLL +L + S ++ + AC ++ ++ ++ Sbjct: 6 FTEKAKSLIQSAQMKALGAGHQIFMPEHLLKVMLEDESGLVQDLINACGGNVQSISDAVD 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + I++ + Q + +V + ++ + + + V +L + ++++ Sbjct: 66 SAIKKLPVI--EGPGSGGLQLSREIAKVFEDSIGIAKRNKDSFVAVERLLQGLTAQKDDT 123 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 +L ++ V+ + + ++ + GS +S + +T ++ +L Sbjct: 124 VGKILAENGVTPQKLNSVVAEMRK----------GSSADSPNSEEKLNAAKKYTKDVTEL 173 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP+IGR++E+ R +QV RR KNNP+L+GE GVGKTAI EGLA RIV DVP Sbjct: 174 AMQGKLDPVIGRDEEIRRTMQVSLRRTKNNPVLIGEPGVGKTAIVEGLANRIVANDVPLG 233 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASG 298 + D + +LD+G+L+AGTK+RG+FE+R KA++ +L + ILFIDE+HT++GAGA SG Sbjct: 234 LHDAKVLALDLGALIAGTKFRGEFEERLKAVINELSRAEGKVILFIDELHTLVGAGATSG 293 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA+NL+KP L+ G++R IG+TT E+ EKD ALARRFQ + I++P+ +T+ I+ Sbjct: 294 A-MDASNLLKPALARGEVRCIGATTLDEYRQHIEKDPALARRFQPVFISQPTETDTISIL 352 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK +YE HH +R T A+ AA L+ +YI DR LPDKAID+IDEA +R R+ SK + Sbjct: 353 RGLKERYEVHHGIRITDGAIIAAATLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSKPE 412 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 + + A +K ++ + LK + + ++ Sbjct: 413 VIDELERKVIQLKIEAEALKKESDENSKQRLKKINEEIE 451 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 218/797 (27%), Positives = 362/797 (45%), Gaps = 93/797 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 L++E+ + A+ ++ F+ VE LL L + + + L V L + Sbjct: 84 LSREIAKVFEDSIGIAKRNKDSFVAVERLLQGLTAQKDDTVGKILAENGVTPQKLNSVVA 143 Query: 60 AFIEQTTPVLPASEE-------------------------ERDTQPTLSFQRVLQRAVFH 94 + ++ P SEE RD + + Q L+R + Sbjct: 144 EMRKGSSADSPNSEEKLNAAKKYTKDVTELAMQGKLDPVIGRDEEIRRTMQVSLRRTKNN 203 Query: 95 VQSSGRNEVTGANVLVAIFSEQESQAAYL-LRKHEVSRLDVVNFISHGTRKDEPTQSSDP 153 G V ++ + + + L L +V LD+ I+ + E + Sbjct: 204 PVLIGEPGVGKTAIVEGLANRIVANDVPLGLHDAKVLALDLGALIAGTKFRGEFEERLKA 263 Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGID------PLIGRE----------KELER 197 S + ++ T + A G +D P + R E + Sbjct: 264 VINELSRAEGKVILFIDELHTLVGAGATSGAMDASNLLKPALARGEVRCIGATTLDEYRQ 323 Query: 198 AIQ---VLCRRRKNNPLLVGESGVGKT-AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 I+ L RR + P+ + + T +I GL + EV I G++ Sbjct: 324 HIEKDPALARRFQ--PVFISQPTETDTISILRGL------KERYEVHHGIRITD---GAI 372 Query: 254 LAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS 313 +A + +I IDE + + ++D+ + L Sbjct: 373 IAAAT-------LSNRYITDRFLPDKAIDLIDEAASRVRI------EMDSKPEVIDELER 419 Query: 314 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 I++ + E D +R +KI+ ++ +N K + E + R Sbjct: 420 KVIQLKIEA--EALKK--ESDENSKQRLKKINEEIENLNSKFADLNS-KWQMEKNKIARI 474 Query: 374 TAKAVR--------AAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVAD 425 A + V+ + L I ++ + S KK V D Sbjct: 475 QETAEKLDNARKELELVQRSGNLGRAGELMYGVIPQLENELKNQEKVTDSFLKKEVTGDD 534 Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I ++V++ IP ++ S+++ L N+ + + V GQ AIEA++ A++ +R+G+ + Sbjct: 535 IANIVSKWTGIPVDNMMHSEKEKLLNMENEIGRRVIGQKDAIEAISNAVRRSRSGVQDTN 594 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 KP GSFLF GPTGVGKTE+ L++ L + LLRFDMSEYME+H+VS+LIGAPPGYVG Sbjct: 595 KPFGSFLFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVG 654 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 ++QGG LT+AV + P+ V+L DEIEKA+PD+FN+LLQ++D G LTD++G+ DFRN +L+ Sbjct: 655 YEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLIDFRNTILI 714 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 662 +T+N G + ++ + M+ +K F PEF NRLD II F L+ D I++++ Sbjct: 715 LTSNLGAEIMLKGNV----DSVRNEVMQIVKSAFRPEFLNRLDEIIIFHSLTRDDIYKII 770 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 D LQ L ++ +S+ + QEA+ +A+ GYD GARP+ RVIQ+ ++ LA +L Sbjct: 771 DVQFSYLQKTLAKRKLSISLLQEAKELIAQTGYDPEYGARPLKRVIQECIQNNLAKLVLS 830 Query: 723 GSLVDGGQVTVA-LDKE 738 G +V+ ++ V LD E Sbjct: 831 GEVVENDELIVYALDNE 847 >UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subunit n=3 Tax=Actinobacteria (class) RepID=D2NR34_9MICC Length = 959 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 170/485 (35%), Positives = 272/485 (56%), Gaps = 21/485 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 + + ++ A A+ + + H+L AL+ A L+A +D+ A+ + Sbjct: 95 FTTKSQEVISAANTNAQTAGNPTIETAHILKALMDQREGVAVAVLKAAGLDVDAISEAAS 154 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 A I++ + ++ + + LQ A Q G V+ +L+ I S +S Sbjct: 155 AEIKKLPKA--SGASVQNASLSRAALSALQAAQTRAQGFGDTYVSTEMILLGIASGTDST 212 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A + K + + I R D + DP G + +E + T+L + Sbjct: 213 ATA-MHKLGATAELIAQTIP-NVRGDRTVDTPDP---------EGTFQALEKYGTDLTAI 261 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGR+ E+ R +QVL RR KNNP+L+GE GVGKTA+ EGLA R+V GDVPE Sbjct: 262 ARAGKLDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVSGDVPES 321 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL-FIDEIHTIIGAGAASG 298 + T+ SLD+GS++AG KYRG+FE+R KA+L+++++ I+ FIDEIHT++GAGA+ Sbjct: 322 LRGKTLISLDLGSMVAGAKYRGEFEERLKAVLEEIKKSEGQIVTFIDEIHTVVGAGASE- 380 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA N++KP+L+ G++R+IG+TT E+ EKD AL RRFQ++ + EPS+++T+ I+ Sbjct: 381 GSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVYVGEPSVDDTIGIL 440 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK +YEAHH V+ A+ AA L+ +YI R LPDKAID+IDEA +R R+ S Sbjct: 441 RGLKERYEAHHKVQIADSALVAAATLSNRYIPSRQLPDKAIDLIDEAASRLRMEIDSA-- 498 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 + + V R+ ++D +++ L L+ + + + ++AL + + Sbjct: 499 -PEEIDQLRRAVDRLTMEELALADETDPASVERLEA-LRKDMADKKEQLDALNARWEAEK 556 Query: 479 AGLGH 483 A L Sbjct: 557 ASLNR 561 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 213/802 (26%), Positives = 356/802 (44%), Gaps = 92/802 (11%) Query: 16 RAREHRHEFMTVEHLLLALLSNPSA-REALEACSV---------------------DLVA 53 RA+ +++ E +LL + S + A+ D Sbjct: 187 RAQGFGDTYVSTEMILLGIASGTDSTATAMHKLGATAELIAQTIPNVRGDRTVDTPDPEG 246 Query: 54 LRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQS----SGRNEVTGANVL 109 Q LE + T + A + + +RV+Q ++ G V V+ Sbjct: 247 TFQALEKYGTDLTAIARAGKLDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVV 306 Query: 110 VAIFSEQESQ-AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER 168 + S LR + LD+ + ++ + E + + + + Sbjct: 307 EGLAQRMVSGDVPESLRGKTLISLDLGSMVAGAKYRGEFEERLKAVLEEIKKSEGQIVTF 366 Query: 169 MENFTTNLNQLARVGGID------PLIGRE----------KELERAIQ---VLCRRRKNN 209 ++ T + A G +D P++ R E I+ L RR + Sbjct: 367 IDEIHTVVGAGASEGSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQ- 425 Query: 210 PLLVGESGVGKTA-IAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFK 268 + VGE V T I GL + E I +L+A Sbjct: 426 -VYVGEPSVDDTIGILRGL------KERYEAHHKVQIAD---SALVAAAT-------LSN 468 Query: 269 ALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFS 328 + + +I IDE + + + ++ + T +E + Sbjct: 469 RYIPSRQLPDKAIDLIDEAAS--RLRMEIDSAPEEIDQLRRAVDR--------LTMEELA 518 Query: 329 NIFEKDRALARRFQKIDITEPSIEETVQIINGL----KPKYEAHHDVRYTAKAVRAAVEL 384 E D A R + + +E + +N K D++ +R+ E+ Sbjct: 519 LADETDPASVERLEALRKDMADKKEQLDALNARWEAEKASLNRVGDIKTQIDELRSRAEV 578 Query: 385 AVK--------YINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARI 436 A + + +P K ++ + A S + V DI V++ I Sbjct: 579 AQREGNLAEASRLLYGEIPAKQAELEEAQRAEDTAKNESMVSEEVTADDIAEVISSWTGI 638 Query: 437 PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGP 496 P + Q + + L + R+ + GQ+ A+ A+++A++ ARAG+ ++P+GSFLF GP Sbjct: 639 PAGRMMQGESEKLLEMEKRIGARLIGQEAAVVAVSDAVRRARAGISDPNRPIGSFLFLGP 698 Query: 497 TGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAV 553 TGVGKTE+ L++ + L+R DMSEY E+HTVSRL+GAPPGYVG ++GG LT+AV Sbjct: 699 TGVGKTELAKALAEFQFDDERALVRIDMSEYSEKHTVSRLVGAPPGYVGHEEGGQLTEAV 758 Query: 554 IKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETE 613 + P++V+LLDE+EKAHP+VF+ILLQV+D+G LTD GR DFRNV+L++T+N G + Sbjct: 759 RRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILILTSNLGSQYLV 818 Query: 614 RKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL 673 + + ++ S A+E + + F PEF NRLD+II F LS + + Q+V I + +L Sbjct: 819 NQDLPF--EERSEKALEVVHQAFRPEFLNRLDDIIMFQPLSAENLGQIVGLQIKSMAKRL 876 Query: 674 DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 + + ++L V++ A WL + GYD A GARP+ R++Q + LA +L G++ DG VTV Sbjct: 877 EDRRLTLNVTEAALEWLGKTGYDPAFGARPLRRLVQREIGDRLARGILSGAIHDGDTVTV 936 Query: 734 ALDKEKNELTYGFQSAQKHKAE 755 ++ + S ++ KAE Sbjct: 937 DVNPDVASDGLSVTSEREQKAE 958 >UniRef50_B3LAU4 ATP-dependent Clp protease, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3LAU4_PLAKH Length = 1243 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 193/705 (27%), Positives = 338/705 (47%), Gaps = 109/705 (15%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL------SNPSAREALEACSVDLVALR 55 ++ + +L+ A AR + F+ V +L+AL+ N + L ++ + L+ Sbjct: 317 FSENCKRALHNAVLEARRKKKMFVNVTDILIALINMAQENENCEFLKYLSELNISVNDLK 376 Query: 56 QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE 115 +EL + E+ + P Q + R E G+ ++ AI + Sbjct: 377 RELIGYDEENSFAPPTGRTSHSDQRDDD---------QSSNQADRREENGS-LMEAIENR 426 Query: 116 QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 ++Q + + + + N + + ++ + S P++ + G +++ T+ Sbjct: 427 DDNQRMRNVNNEQSNHNFMNNLNNDYLNQTREFKNYEENSFPSN-NKLFGSSYVKDCLTD 485 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 + A G + GR+KE++R I++L RR+K+NPLL+GESGVGKTAI E L++ I++ Sbjct: 486 MVHAAYEKGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIVEHLSYLILKDK 545 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VP + +C IY L++G+++AGTKYRG+FE++ K LL + + +ILFIDEIH I+GAG+ Sbjct: 546 VPYHLRNCRIYQLNVGNIVAGTKYRGEFEEKMKHLLSNMNKKKKNILFIDEIHVIVGAGS 605 Query: 296 ASGGQVDAANLI---------------------------------------KPLLSSGKI 316 G +DA+NL+ KP + + Sbjct: 606 GE-GSLDASNLLKPFLSSDNLQCIGTTTFQEYTKYIEADKALRRRFNCVPVKPFSAKETL 664 Query: 317 RVIGST--TYQEFSNIFEKDRALARRFQKIDITE---PS---IEETVQIINGL----KPK 364 ++ Y+++ NI+ + AL + +TE P+ ++ + I++ K K Sbjct: 665 LLLKKIKYNYEKYHNIYYTNDALKS---IVMLTEDYLPTANFPDKAIDILDEAGAYQKIK 721 Query: 365 YEAHHDVRYTAK-----------AVRAAVELAVKYINDRHL-----------------PD 396 YE R + A A +LA + + P Sbjct: 722 YEMFMRQRLRDERGRRADAEPRNAESANGDLANGNLTNGEQMISHQVNATETSSDDHPPG 781 Query: 397 K------AIDVIDEAGA-RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTL 449 K + E A + K V IE++V++ + I ++ + + + Sbjct: 782 KLRTDDNQPAFVHEDRNVEAENYLENMHMKYVTSDVIENIVSKKSSISYIKKNKKEEEKI 841 Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 L ++L ++ GQ+K I+ L+ + A + +KP+G+ L G +GVGKT +S Sbjct: 842 IKLKEKLNKIIIGQEKVIDILSRYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVIS 901 Query: 510 KALGIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIE 567 K L E L+ +MSEY+++H+VS+L G+ PGY+G+ +GG LT++V K P +++L DEIE Sbjct: 902 KYLFNEDNLIVINMSEYIDKHSVSKLFGSYPGYIGYKEGGELTESVKKKPFSIILFDEIE 961 Query: 568 KAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET 612 KAH +V ++LLQ++DNG LTD+ G K F+N + MTTN G Sbjct: 962 KAHSEVLHVLLQILDNGMLTDSKGNKVSFKNTFIFMTTNVGSDII 1006 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 4/131 (3%) Query: 613 ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ 672 E+ +++ + EE+KK F PEF NR+D I F + + I +L+ + Sbjct: 1097 EKLRTNEWYEELQPEIEEELKKKFLPEFLNRIDEKIIFRQFLKRDVVNIFQNMIEDLKKR 1156 Query: 673 L-DQKGVSLEVSQEARNWLA---EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 + +K ++L + Q+ ++ YD GAR + R + ++ P+A+ L+ Sbjct: 1157 IKKRKNLNLIIEQDVIKYICSDENNIYDMNFGARSIRRALYKYIEDPIASFLISNLCEPN 1216 Query: 729 GQVTVALDKEK 739 + V+L Sbjct: 1217 DSIHVSLSNGN 1227 Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 53/153 (34%), Gaps = 13/153 (8%) Query: 36 SNPSAREALEACSVD--LVALRQELEAFIEQTTPV-LPAS------EEERDTQPTLSFQR 86 P L+ + D L +L + + P LP +E+ D + + + +R Sbjct: 264 DAPDGPPLLDPENGDQLPDELSSDLSKELSRQLPRDLPNGLPNELPDEKADIKFSENCKR 323 Query: 87 VLQRAVFHVQSSGRNEVTGANVLVAIFS----EQESQAAYLLRKHEVSRLDVVNFISHGT 142 L AV + + V ++L+A+ + + + L + +S D+ + Sbjct: 324 ALHNAVLEARRKKKMFVNVTDILIALINMAQENENCEFLKYLSELNISVNDLKRELIGYD 383 Query: 143 RKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 ++ + S + + + + N Sbjct: 384 EENSFAPPTGRTSHSDQRDDDQSSNQADRREEN 416 >UniRef50_UPI0001744445 ClpA/B family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744445 Length = 1074 Score = 404 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 167/606 (27%), Positives = 286/606 (47%), Gaps = 26/606 (4%) Query: 158 NSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNP--LLVGE 215 EE G++ + +L++ + + RE EL R+ + P +LVG Sbjct: 190 GQEEPMDGQKELYRVGRSLDRQYPQ-ELQRALLRETELTELAGWFSRKTPHVPMVVLVGP 248 Query: 216 SGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE 275 VGKTA+ RI++ P+V + + +++G Y G +E+R+ +L +L Sbjct: 249 PKVGKTALIRECVRRIIES--PKVSRRGQFWHVSPQRVISGMSYLGQWEERWTVVLAELR 306 Query: 276 QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDR 335 + +L +D++ + AG +SG ++ +++K + ++ T + ++ + E DR Sbjct: 307 KR-RHVLVLDDLPGLFEAGKSSGSELTLGHVLKARQEHEPVAILAEATPEVWARLREMDR 365 Query: 336 ALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLP 395 A A F + + E E T++I+ R+T V ++L ++ R P Sbjct: 366 AFASMFHVMHVRETDDETTLRILVRTLQAMPLGARTRFTLDVVPMVMQLQQRFARARAFP 425 Query: 396 DKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 KA++++ + S V+ + A I +K + + L Sbjct: 426 GKAVEMVQALAQGLK----SAGGTVVDGPAVLEWFASRHGIRKKMLDAGESLPRARLRGA 481 Query: 456 LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG-- 513 + GQ+ AI A+ + + MA+A L H+P+G+ LF GPTG GKTE L++ + Sbjct: 482 FSQRIVGQEPAIAAMVDTVLMAKAELQDAHRPMGTLLFLGPTGTGKTECARALAQFVFGS 541 Query: 514 -IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 ++LRFD++EY RLIG G +GGLLT V + P ++LL DE+EKAHPD Sbjct: 542 EEKMLRFDLNEYSGADAALRLIG------GAGRGGLLTSRVRRQPFSLLLFDEVEKAHPD 595 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS---TDAM 629 V ++LLQV+ G LTD G+ ADF N ++++T+N G R S+G + + Sbjct: 596 VLDLLLQVLGEGRLTDAQGQTADFCNCIIILTSNLGAGAGSR-SVGFAATEEIPGGEHYI 654 Query: 630 EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEAR 687 E +K F PEF NRLD I+ F L I + + L + V + + + Sbjct: 655 EAARKHFRPEFFNRLDRIVPFHELRKGDIVYLARTMAERALNRQGLQDRHVDVRLEDDVV 714 Query: 688 NWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 LA++G+D A GAR + R ++ L +PLA +LL + V +D E L + Sbjct: 715 KALADRGFDLAFGARALRRAVETYLVEPLAEKLLGMPWDRAARFQVTVDPEG-RLQFHLH 773 Query: 748 SAQKHK 753 + ++ Sbjct: 774 TVKQVD 779 >UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=HS101_ARATH Length = 911 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 165/460 (35%), Positives = 259/460 (56%), Gaps = 19/460 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 + ++ A A H T HL AL+S+P+ +A+ + + A Q E Sbjct: 6 FTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAA--QSAE 63 Query: 60 AFIEQTTPVLPASEEERDTQP-TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 I Q LP+ D P + S +V++RA +S G + +++ + ++S Sbjct: 64 RVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLL--EDS 121 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 Q LL + V+ V + + K+ G + S + ++ + +L + Sbjct: 122 QIRDLLNEVGVATARVKSEVEKLRGKE--------GKKVESASGDTNFQALKTYGRDLVE 173 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A G +DP+IGR++E+ R +++L RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVP Sbjct: 174 QA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPN 231 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAAS 297 + D + SLD+G+L+AG KYRG+FE+R K++LK++E + ILFIDEIH ++GAG Sbjct: 232 SLTDVRLISLDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTE 291 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DAANL KP+L+ G++R IG+TT +E+ EKD A RRFQ++ + EPS+ +T+ I Sbjct: 292 -GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISI 350 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + GLK KYE HH VR +A+ A +L+ +YI RHLPDKAID++DEA A R+ S+ Sbjct: 351 LRGLKEKYEGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQP 410 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 ++ N+ + E+ ++ + L + L Sbjct: 411 EEIDNLERKRMQLEIELHALEREKDKASKARLIEVRKELD 450 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 160/427 (37%), Positives = 239/427 (55%), Gaps = 16/427 (3%) Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L + Q + + +E + I LK K E ++ ++ + +LA L Sbjct: 452 LRDKLQPLTMKYRKEKERIDEIRRLKQKRE---ELMFSLQEAERRYDLARA----ADLRY 504 Query: 397 KAIDVIDEAGARARLMPVSKRKK---TVNVADIESVVARIARIPEKSVSQSDRDTLKNLG 453 AI ++ A A+ + V I VV+R IP + Q++++ L L Sbjct: 505 GAIQEVESAIAQLEGTSSEENVMLTENVGPEHIAEVVSRWTGIPVTRLGQNEKERLIGLA 564 Query: 454 DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 DRL V GQ++A+ A++EAI +RAGLG +P GSFLF GPTGVGKTE+ L++ L Sbjct: 565 DRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLF 624 Query: 514 IE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH 570 + L+R DMSEYME+H+VSRLIGAPPGYVG ++GG LT+AV + P+ V+L DE+EKAH Sbjct: 625 DDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYCVILFDEVEKAH 684 Query: 571 PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD-AM 629 VFN LLQV+D+G LTD GR DFRN V++MT+N G G + + + D M Sbjct: 685 VAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGAEHLLAGLTGKVTMEVARDCVM 744 Query: 630 EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNW 689 E++K F PE NRLD I+ FD LS D + +V + ++ V+L ++GV+L V+ A ++ Sbjct: 745 REVRKHFRPELLNRLDEIVVFDPLSHDQLRKVARLQMKDVAVRLAERGVALAVTDAALDY 804 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 + + YD GARP+ R ++ + L+ ++ + + TV +D +L Y +S Sbjct: 805 ILAESYDPVYGARPIRRWMEKKVVTELSKMVVREEIDENS--TVYIDAGAGDLVYRVESG 862 Query: 750 QKHKAEA 756 A Sbjct: 863 GLVDAST 869 >UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 Tax=Helicobacter RepID=C3XMZ6_9HELI Length = 857 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 153/492 (31%), Positives = 266/492 (54%), Gaps = 24/492 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 L L+ +L + A ++++ + HL A+L+N S+ +AL ++D AL E + Sbjct: 7 LTNTLQETLEQGASLALHNKNQEIEPIHLFWAMLTNTSSLLNQALNRLNIDKTALELEAK 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + +S + + + + + L +A +G + + ++A E Sbjct: 67 SIASALPQ--SSSVTKENLKISRNLSDALNQADGLATKNGDSYIALDTFILANLQEP--- 121 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + ++ + + ++ G++ +S+ E +E F +L + Sbjct: 122 ----------TIRNLFSKFLDINELKKTFEAMRAGAKIDSQSADENLESLEKFGIDLTKK 171 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP+IGR++E+ +Q+L R+ KNNP+L+GE GVGKTA+ EGLA RIV+ +VP Sbjct: 172 AIEGKLDPVIGRDEEITHMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVKKEVPLS 231 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + + +LD+ +L+AG KYRG+FE R K ++ ++++ N ILFIDEIHTI+GAGA+ GG Sbjct: 232 LQNKRVIALDMSALVAGAKYRGEFEDRLKKVIDEVKKSGNVILFIDEIHTIVGAGASEGG 291 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G++ IG+TT +E+ FEKD AL RRFQ + + EP++ E +QI+ Sbjct: 292 -MDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQPVMLNEPNVNEALQILR 350 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+K + EAHH+V T A+ AA +L+ +YI DR LPDKAID+IDEA A ++ S+ + Sbjct: 351 GIKERLEAHHNVTITDSALVAAAKLSSRYITDRFLPDKAIDLIDEAAAELKMQIESEPSE 410 Query: 420 TVNVA------DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 V +E + + + ++ + + +K + Q + + + Sbjct: 411 LAKVKREMEALQVEKEALLMEKSEKNQARIAEIQKELSDKEEVKKALEAQFETEKQVFNK 470 Query: 474 IKMARAGLGHEH 485 I + + Sbjct: 471 IANIKIEIDSLR 482 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 202/799 (25%), Positives = 363/799 (45%), Gaps = 97/799 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +++ L +LN A A ++ ++ ++ +LA L P+ R +D+ L++ EA Sbjct: 85 ISRNLSDALNQADGLATKNGDSYIALDTFILANLQEPTIRNLFSKF-LDINELKKTFEAM 143 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQS--SGRNEVTGANVLVAIFSEQESQ 119 +++E ++ + ++A+ GR+E +++ + + ++ Sbjct: 144 RAGAKIDSQSADENLESLEKFGID-LTKKAIEGKLDPVIGRDEEIT-HMMQILIRKTKNN 201 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDE------------------------PTQSSDPGS 155 LL + V + VV ++ K E + D Sbjct: 202 -PILLGEPGVGKTAVVEGLAQRIVKKEVPLSLQNKRVIALDMSALVAGAKYRGEFEDRLK 260 Query: 156 QPNSEEQAGGEERM--ENFTTNLNQLARVGGID------PLIGRE----------KELER 197 + E + G + + T + A GG+D P + R KE + Sbjct: 261 KVIDEVKKSGNVILFIDEIHTIVGAGASEGGMDAANILKPALARGELHTIGATTLKEYRK 320 Query: 198 AIQ---VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 + L RR + P+++ E V + A +I++G + E + ++ +L+ Sbjct: 321 YFEKDAALQRRFQ--PVMLNEPNVNE-------ALQILRG-IKERLEAHHNVTITDSALV 370 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 A K + +I IDE + S L+ Sbjct: 371 AAAK-------LSSRYITDRFLPDKAIDLIDEAAAELKMQIESEPS---------ELAKV 414 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL----KPKYEAHHD 370 K R + + ++ + + EK R +I EE + + K + + Sbjct: 415 K-REMEALQVEKEALLMEKSEKNQARIAEIQKELSDKEEVKKALEAQFETEKQVFNKIAN 473 Query: 371 VRYTAKAVRAAVELAVKY--------INDRHLPDKAIDVIDEAGARARLMPV-SKRKKTV 421 ++ ++R LA + I+ +P ++ ++ + + + V Sbjct: 474 IKIEIDSLRTQSTLAKRNGDFSKAAEIDYGKIPQLENELKEQNQKWENMQENGTLLRNAV 533 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 I +V++R +IP K + Q ++D + + + LK V GQD A+ A+ AIK +AGL Sbjct: 534 LPESIAAVISRWTQIPIKKMLQDEKDKILGIEEELKKDVVGQDNALHAIARAIKRNKAGL 593 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPP 538 ++P+GSFLF GPTGVGKTE L++ L L+R DMSEYME+H SRL+GAPP Sbjct: 594 SELNRPIGSFLFLGPTGVGKTESAKTLARFLFDSEKNLIRIDMSEYMEKHAASRLVGAPP 653 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+++GG LT+AV + P++V+L DEIEKAHPDVFN+LLQV+D+G LTDN G DFRN Sbjct: 654 GYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNMLLQVLDDGRLTDNKGVTIDFRN 713 Query: 599 VVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 ++++T+N S + E +K F PEF NRLD+II F+ L + I Sbjct: 714 TIIILTSNIASNAIMEISD---LTEREKAVKEALKGYFKPEFLNRLDDIIIFNPLGLEQI 770 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 +V+ +Q ++ ++ +++ + + A+ ++A+ G+D GARP+ R + + ++ LA+ Sbjct: 771 TSIVEILFKTIQKKVQERDINVTLEESAKEFIAKVGFDPIYGARPLKRALYEEIEDRLAD 830 Query: 719 ELLFGSLVDGGQVTVALDK 737 +L + +G +V+ + Sbjct: 831 LILQDKIKEGSKVSFYAEN 849 >UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HY88_9ACTO Length = 861 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 162/428 (37%), Positives = 243/428 (56%), Gaps = 17/428 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL---SNPSAREALEACSVDLVALRQEL 58 L ++N A RA H +T HLLLALL N + + L A D A+R Sbjct: 14 LTNRSRDAINAAGNRAVTEGHPDLTPAHLLLALLQGQDNENIVDLLAAVDADQAAVRAGA 73 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E + V A QP V+ A + G ++ ++LV I ++ Sbjct: 74 EKALGSLPSV--AGSTVAPPQPNRDLLAVIADAQSRAKDLGDEYLSTEHLLVGIAAKG-G 130 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 AA +L + +++ Q + G + + + G + +E F T+ Sbjct: 131 PAAEVLTGQGATPKKLID----------AFQKARGGRRVTTADPEGQYKALEKFGTDFTA 180 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR G +DP+IGR++E+ R +QVL RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVPE Sbjct: 181 AARDGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPE 240 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAAS 297 + D + SLD+ +++AG KYRG+FE+R K +L ++ D I FIDE+HT++GAGA Sbjct: 241 SLKDKRLVSLDLSAMVAGAKYRGEFEERLKTVLAEIRDSDGQIITFIDELHTVVGAGAGG 300 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 +DA N++KP+L+ G++R++G+TT E+ EKD AL RRFQ++ + EP++E+T+ I Sbjct: 301 DSSMDAGNMLKPMLARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDTIAI 360 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + GLK +YEAHH V+ A+ AA L+ +YI R LPDKAID++DEA +R R+ S Sbjct: 361 LRGLKGRYEAHHKVQIADSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSP 420 Query: 418 KKTVNVAD 425 + + Sbjct: 421 LEIDELQR 428 Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats. Identities = 182/728 (25%), Positives = 314/728 (43%), Gaps = 73/728 (10%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALL-SNPSAREALEACSVDLVALRQELEAF 61 N++L + A +RA++ E+++ EHLL+ + A E L L + Sbjct: 94 NRDLLAVIADAQSRAKDLGDEYLSTEHLLVGIAAKGGPAAEVLTGQGATPKKLIDAFQKA 153 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANV----LVAIFSEQE 117 + + ++ E + F A + + V G + +V + S + Sbjct: 154 --RGGRRVTTADPEGQYKALEKFGTDFTAA---ARDGKLDPVIGRDQEIRRVVQVLSRRT 208 Query: 118 SQAAYLLRKHEVSRLDVVNFISH---------GTRKDEPTQSSDPGSQPNSEEQAGGEER 168 L+ + V + VV ++ + ++ + EER Sbjct: 209 KNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKDKRLVSLDLSAMVAGAKYRGEFEER 268 Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNN-------PLLV-GE-SGVG 219 ++ + +I EL + + P+L GE VG Sbjct: 269 LKTVLAEIRDSDGQ-----IITFIDELHTVVGAGAGGDSSMDAGNMLKPMLARGELRMVG 323 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSL----DIGSLLAGTKYRGDFEKRFKALLKQLE 275 T + E RI + E + + D ++L G K R + + + L Sbjct: 324 ATTLDEY-RERIEKDPALERRFQQVLVAEPTVEDTIAILRGLKGRYEAHHKVQIADSALV 382 Query: 276 QDTN------SILFIDE--IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEF 327 + F+ + I + A + ++D++ L L G + +E Sbjct: 383 AAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPLEIDELQRG----VDRLKMEEL 438 Query: 328 SNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHH-------DVRYTAKAVRA 380 + + E D A R +++ EE + GL ++E +++ +R Sbjct: 439 ALVKETDPASRERLERLRRDLADKEEE---LRGLTARWEKEKQSLNRVGELKEKLDELRG 495 Query: 381 AVELAVK--------YINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVAR 432 E A + + +P D+ + A + + K+ V DI VA Sbjct: 496 QAERAQRDGDFDTASKLLYGEIPTLERDLEAASEAEEEVSKDTMVKEEVGADDIADTVAA 555 Query: 433 IARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFL 492 IP + + + L + + L + GQ +A+ A+++A++ RAG+ +P GSFL Sbjct: 556 WTGIPAGRLLEGETQKLLRMEEELGKRLIGQGEAVRAVSDAVRRTRAGIADPDRPTGSFL 615 Query: 493 FAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 F GPTGVGKTE+ L+ L + ++R DMSEY E+HTVSRL+GAPPGYVG+++GG L Sbjct: 616 FLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVSRLVGAPPGYVGYEEGGQL 675 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGV 609 T+AV + P++V+LLDE+EKAHP+VF+ILLQV+D+G LTD GR DFRN +LV+T+N G Sbjct: 676 TEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNAILVLTSNLGS 735 Query: 610 RETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 + + +E ++ F PEF NRLD+++ F L+ D + ++ I L Sbjct: 736 QFLVDPIT--SETEKKEQVLEVVRASFKPEFLNRLDDLVVFSALTKDELGRIARLQIDRL 793 Query: 670 QVQLDQKG 677 +L ++ Sbjct: 794 AKRLAERR 801 >UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CLPB_DEIRA Length = 852 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 162/458 (35%), Positives = 251/458 (54%), Gaps = 23/458 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + +++N A A+E+ ++ +T H+L LL N +A AL DL R L+A Sbjct: 6 FTEASAVAINAAQQLAQENHNQNLTHFHVLRTLLDNDTASRALTLAGGDLNTARAALDAE 65 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 I + V + + R Q+A G + V +L+A+ E + Sbjct: 66 IAKLPKV---QGSDGQLYLDPALNRAFQKADTLAAQLGDSFVAADTLLLALRGEYRGRG- 121 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 + + G ++ + + + T+L Q AR Sbjct: 122 ----------------LPDEVSLNRAVTEQRKGKTVTNKTSEQQFDALNKYGTDLTQRAR 165 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G DP+IGR++E+ R +Q+L RR KNNP+L+GE GVGKTAIAEGLA RIV+GDVPE + Sbjct: 166 DGKFDPVIGRDEEIRRVMQILLRRSKNNPVLIGEPGVGKTAIAEGLAMRIVKGDVPEGLR 225 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTIIGAGAASGGQ 300 D I SL++GSLLAG K+RG+FE+R K ++ + ++ ILF+DEIHTI+GAG G Sbjct: 226 DKKIVSLEMGSLLAGAKFRGEFEERLKGVIDEVVKSAGEIILFVDEIHTIVGAGKTEGSP 285 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 DA N++KP L+ G++ +IG+TT E+ EKD AL RRFQ + + EPS+E+T+ I+ G Sbjct: 286 -DAGNMLKPALARGELHLIGATTLDEYRE-IEKDAALERRFQPVFVDEPSVEDTISILRG 343 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 +K +Y+ HH+V T A+ AA L+ +YI DR LPDKAID+IDE+ AR R+ S ++ Sbjct: 344 IKERYQVHHNVEITDPALVAAATLSNRYITDRQLPDKAIDLIDESAARLRMALESSPERI 403 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 ++ + + ++ ++ L ++ ++LK Sbjct: 404 DQLSRRKLQLEIEREALKREKDVDSQNRLLDIENQLKT 441 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 162/391 (41%), Positives = 238/391 (60%), Gaps = 10/391 (2%) Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVK-YINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 L+ K E VR + R +L + LP DV D +L Sbjct: 462 ALREKREKLDAVRTQIEKARRDYDLEEAARLEYGELPALEKDVQD---LEKKLKSAEFAH 518 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V DI +VV+R IP + + +R+ L +L ++L V GQD+AI ++++AI+ AR Sbjct: 519 MEVTEEDIAAVVSRWTGIPVSKLMEGEREKLLHLEEQLHGRVIGQDRAIVSVSDAIRRAR 578 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIG 535 AGL ++P+GSF+F GP+GVGKTE+ L++ L ++R DMSEYME+HTV+RLIG Sbjct: 579 AGLNDPNRPLGSFMFLGPSGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHTVARLIG 638 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGYVGF++GG LT+AV + P+AV+L DEIEKAHPDVFN+LLQV+D+G LTD GR D Sbjct: 639 APPGYVGFEEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVD 698 Query: 596 FRNVVLVMTTNAGVRET-ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 FRN +++MT+N G E + G + + M+E++ F PEF NR+D+II FD L+ Sbjct: 699 FRNTLIIMTSNIGSPLILEMQQRGEDAETIKSAVMDELRGEFRPEFLNRVDDIIVFDALT 758 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + +VD + L+ +L ++ ++L ++++A++ LAE GYD A GARP+ R I ++ Sbjct: 759 AKDLQSIVDIQLGGLRRRLAERRITLHLTEDAKDKLAELGYDPAYGARPLRRTISQYIET 818 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNELTYG 745 PLA E+L G + DG + V T+ Sbjct: 819 PLAREILGGQIQDGSVLNVDY--GDGGFTFN 847 >UniRef50_A1ZTB7 Chaperone ClpB, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZTB7_9SPHI Length = 748 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 180/735 (24%), Positives = 312/735 (42%), Gaps = 59/735 (8%) Query: 50 DLVALRQELEAFIEQTTP--------------------VLPASEEERDTQPTLSFQRVLQ 89 D+ +L+ +IE+ + P +E P V Sbjct: 33 DVKSLKASFSEYIEKQMKDSWFYEPEIGSTRIKTISMDIRPHYQESDRIYPVKETLEVKI 92 Query: 90 RAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHE------VSRLDVVNFISHGTR 143 AV+ SG E + + E L+ ++ D+ N + T Sbjct: 93 DAVYGSNESGYYECFLPLLHKNFYFYNEKDLDRLVEHFSRDTFHALTPDDIYNLLIPATP 152 Query: 144 KDEPTQSSDPGSQPNSEEQAGGEER--MENFTTNL---NQLARVGGIDPLIGREKELERA 198 E + P + + ++ + L + R G D R + ++ Sbjct: 153 WLEQVKVKIPKRKKEKSQSGDYKQFKLLNGIAEKLPYSRKENRKGTPDAAWERGETIDHL 212 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI-VQGDVPEVMADCTIYSLDIGSLLAGT 257 I ++ K N LLVG+SGVGK+A+ ++ Q + + + + + Sbjct: 213 INIMIA-EKTNVLLVGKSGVGKSAVIHEAIRKVTSQQKSKDFFERNSFWRTTPSRITSKA 271 Query: 258 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 KY G+++ + ++ QLE IL+++ + G G + A + + GK+R Sbjct: 272 KYLGEWQLICEDMVYQLE-GARGILWLESFVMLALTGG-EGPEDSVAAFLTSFIRRGKLR 329 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 ++ T +E + F+ + + E + T+++ + V +T KA Sbjct: 330 MVSEVTPEELEVMRRMIPGFIEHFRILKVDEMDTQTTLKLFEYFNQYINKRYSVAFTPKA 389 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 A L ++I P KAI + +A + ++ T+++ I R + IP Sbjct: 390 QEMAYVLLDRFIKYESFPGKAIRFLMTCANKA----MQDKELTIDLPQIIDNFTRQSGIP 445 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 + + L D K + GQD ++ +++ IK+ +AG+ +KPV + +FAGPT Sbjct: 446 DFLLRDDLFLNEVELKDFFKEKIKGQDHVVDKVSDIIKVFKAGINDPNKPVATMIFAGPT 505 Query: 498 GVGKTEVTVQLSKALGIE------LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD 551 GVGKT +S + L+R DMSE+ + RLIG+ G L Sbjct: 506 GVGKTATVKAISSYFFGKGQAYEPLIRLDMSEFQHPSQIYRLIGS---------QGKLIQ 556 Query: 552 AVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE 611 V + P +VLLLDEIEKA+P +F+ LL V+D G L D GR DFRN +++MT+N G Sbjct: 557 HVRQKPFSVLLLDEIEKANPLIFDALLTVLDEGILLDAAGRLTDFRNTIIIMTSNLGA-- 614 Query: 612 TERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQV 671 T R S+G D ++ F PEF NR+D I+ F+ L + I + K + E+Q Sbjct: 615 TTRSSLGFRSYQGH-DFESNVRAFFRPEFYNRVDAILVFNPLEKETILSITRKELDEIQK 673 Query: 672 Q--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGG 729 + L Q+ + L+ ++ + E+G+D GARP+ R I+ + PL + + Sbjct: 674 RDGLKQRNIKLQFTKNLIEHIGEEGFDPKYGARPLQREIERLIIAPLGHLFIQNPAFVNR 733 Query: 730 QVTVALDKEKNELTY 744 +TV D ++ L Y Sbjct: 734 TITVDYDGKEVSLRY 748 >UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q3L1D0_VITVI Length = 911 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 162/460 (35%), Positives = 259/460 (56%), Gaps = 18/460 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 + +L A A H +T H+ +AL+ N R+A+ + A +E Sbjct: 6 FTHKTNETLAGAHELAMNSGHAQLTPLHVAVALITDHNGILRQAIIGAGGNEEAA-NSVE 64 Query: 60 AFIEQTTPVLPASEEERDTQP-TLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + LP D P + + +V++RA +S G + +++ + ++S Sbjct: 65 RVFNKALKKLPTQSPPPDEIPVSTTLIKVVRRAQSSQKSRGDTHLAVDQLILGLL--EDS 122 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 Q LL++ VS V + + K+ G + S + ++ + +L + Sbjct: 123 QIGDLLKEAGVSTSRVKSEVEKLRGKE--------GKKVESASGDTTFQALKTYGRDLVE 174 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A G +DP+IGR++E+ R I++L RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVP Sbjct: 175 QA--GKLDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPS 232 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAAS 297 +A+ + +LD+G+L+AG KYRG+FE+R K++LK++E+ + ILFIDEIH ++GAG Sbjct: 233 NLAEVRLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTE 292 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DAANL KP+L+ G++R IG+TT +E+ EKD A RRFQ++ + EPS+ +T+ I Sbjct: 293 -GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISI 351 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + GLK +YE HH VR +A+ A +L+ +YI RHLPDKAID++DEA A R+ S+ Sbjct: 352 LRGLKERYEGHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQP 411 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 ++ N+ + EK ++ + L + L Sbjct: 412 EEIDNLERKRMQLEVELHALEKEKDKASKARLVEVRRELD 451 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 156/420 (37%), Positives = 232/420 (55%), Gaps = 17/420 (4%) Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH--L 394 L + Q + + +E + + LK K E + + A E +Y R L Sbjct: 453 LRDKLQPLMMKYKKEKERIDELRRLKQKRE---------ELLFALQEAERRYDLARAADL 503 Query: 395 PDKAIDVIDEAGARARLMPVS--KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNL 452 AI ++ A A +TV I VV+R IP + Q+D++ L L Sbjct: 504 RYGAIQEVEAAIANLEGTTDENMMLTETVGPEQIAEVVSRWTGIPVTRLGQNDKERLIGL 563 Query: 453 GDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 +RL V GQD+A+ A+ EA+ +RAGLG +P GSFLF GPTGVGKTE+ L++ L Sbjct: 564 AERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQL 623 Query: 513 GIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA 569 + L+R DMSEYME+H+VSRLIGAPPGYVG D+GG LT+AV + P++V+L DE+EKA Sbjct: 624 FDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDEGGQLTEAVRRRPYSVVLFDEVEKA 683 Query: 570 HPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD-A 628 H VFN LLQV+D+G LTD GR DF N V++MT+N G +G ++ D Sbjct: 684 HIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTSNLGAEHLLSGLVGKCTMQDARDRV 743 Query: 629 MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARN 688 M+E+++ F PE NRLD I+ FD LS D + +V + ++ +L ++G++L V+ A + Sbjct: 744 MQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKVARLQMKDVASRLAERGIALAVTDAALD 803 Query: 689 WLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 + + YD GARP+ R ++ + L+ L+ + + V + L Y ++ Sbjct: 804 VVLAESYDPVYGARPIRRWLEKKVVTELSKMLIREEIDENSTVYIDAGVSGKGLAYRVEN 863 >UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria RepID=D1B2U8_SULD5 Length = 856 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 162/496 (32%), Positives = 276/496 (55%), Gaps = 40/496 (8%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 L ++ ++ A + A ++ T H+ L++N ++ + ++D A+ E++ Sbjct: 8 LTNQMREAIESAISLALHSKNNEATPLHVTWGLITNSASILNQVFNKMNIDKSAIELEVK 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + +++ S+E + + + LQ+A ++ G + ++ L+A + Sbjct: 68 SEVQKLPTASHVSKE--NISLSRTLVESLQKAEGLMKQKGDSYLSVDTWLLANIENEP-- 123 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 L+K LD++ F + ++ G + + + E +E + NL +L Sbjct: 124 ----LKKILGKYLDLLAF-------KKNLEALRGGKKIDKQSADENLESLEKYGINLTKL 172 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP+IGR++E++R +Q+L R+ KNNP+L+GE G GKTAIAEGLA RI DVP Sbjct: 173 ASEGKLDPVIGRDEEIQRMMQILIRKTKNNPILIGEPGTGKTAIAEGLALRIAHNDVPLS 232 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + ++ +LD+ +L+AG KYRG+FE R KA++ ++++ N ILFIDEIHTI+GAGA+ G Sbjct: 233 LQNKSVVALDMSALIAGAKYRGEFEDRLKAVIDEVKKSGNVILFIDEIHTIVGAGASE-G 291 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G++ IG+TT +E+ FEKD AL RRFQ + + EPSI E +QI+ Sbjct: 292 SMDAANILKPALARGELHTIGATTLREYRKYFEKDAALQRRFQPVTVNEPSINEALQILR 351 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+K EAHH+V A+ AA +L+ +YI+DR LPDKAID+IDEA A ++ S + Sbjct: 352 GIKEHLEAHHNVSIQDSALIAAAKLSSRYISDRFLPDKAIDLIDEAAAELKMQIES---E 408 Query: 420 TVNVADIESVVARIARIPEKSVSQ---SDRDTLKNLGDRL----------------KMLV 460 ++ I+ ++ + E + + + + L + L + V Sbjct: 409 PTELSRIKRAISTLMVEKEALLMEKNKKNDERLSAIEKELGDAKEKMRSLETQFENEKQV 468 Query: 461 FGQDKAIEALTEAIKM 476 F AI++ EA++ Sbjct: 469 FNDIAAIKSQAEALRR 484 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 214/804 (26%), Positives = 360/804 (44%), Gaps = 104/804 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 L++ L SL A ++ +++V+ LLA + N ++ L +DL+A ++ LEA Sbjct: 86 LSRTLVESLQKAEGLMKQKGDSYLSVDTWLLANIENEPLKKILGKY-LDLLAFKKNLEAL 144 Query: 62 -----------------IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRN--- 101 +E+ L E P + +QR + + +N Sbjct: 145 RGGKKIDKQSADENLESLEKYGINLTKLASEGKLDPVIGRDEEIQRMMQILIRKTKNNPI 204 Query: 102 ---------EVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSD 152 + + I L+ V LD+ I+ G + + Sbjct: 205 LIGEPGTGKTAIAEGLALRIAHND---VPLSLQNKSVVALDMSALIA-GAKYRGEFEDRL 260 Query: 153 PGSQPNSEEQAGGEERMENFTTNLNQLARVGGID------PLIGREKELERAIQVLCRRR 206 ++ ++ T + A G +D P + R EL R Sbjct: 261 KAVIDEVKKSGNVILFIDEIHTIVGAGASEGSMDAANILKPALAR-GELHTIGATTLREY 319 Query: 207 KN------------NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 + P+ V E + + A +I++G + E + S+ +L+ Sbjct: 320 RKYFEKDAALQRRFQPVTVNEPSINE-------ALQILRG-IKEHLEAHHNVSIQDSALI 371 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 A K + +I IDE + S LS Sbjct: 372 AAAK-------LSSRYISDRFLPDKAIDLIDEAAAELKMQIESEPT---------ELSRI 415 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDV--- 371 K R I + ++ + + EK++ R I+ E + + + L+ ++E V Sbjct: 416 K-RAISTLMVEKEALLMEKNKKNDERLSAIE-KELG--DAKEKMRSLETQFENEKQVFND 471 Query: 372 ----RYTAKAVRAAVELAVKYIN---------DRHLPDKAIDVIDEAGARARLMPVSKRK 418 + A+A+R E+A K + + + + + K Sbjct: 472 IAAIKSQAEALRREAEIAKKQSEFNKAAEIEYGKLPELLKKEEELKLKWEKMVESGTLLK 531 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 +V+ I ++V++ IP + QS++ + ++ + LK V GQD AI+A+ AIK + Sbjct: 532 NSVDEEMIATIVSKWTGIPVNKMLQSEKAKVLHVEEYLKKEVVGQDAAIKAIGRAIKRNK 591 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIG 535 AGL ++KP+GSFLF GPTGVGKT+ L+ L L+RFDMSEYME+H+VSRL+G Sbjct: 592 AGLSEQNKPIGSFLFLGPTGVGKTQSAKALANFLFDTTKALIRFDMSEYMEKHSVSRLVG 651 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGYVG+D+GG LT+AV + P++V+L DEIEKAHPDVFNILLQV+D G LTDN G D Sbjct: 652 APPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDEGRLTDNKGVTVD 711 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 F+N ++++T+N K + + + + M+E++ F PEF NRLD+II F+ LS Sbjct: 712 FKNTIIILTSNI----ASSKIMEFEGEKRTEEVMKELRMHFKPEFLNRLDDIIIFNPLSE 767 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 D + ++V +++ +L K + E++ A++ +AE G+D GARP+ R + + ++ Sbjct: 768 DGLREIVTIMFGDIEKKLAHKEIKAELTTTAKSLIAEAGFDPVYGARPLKRALYELVEDK 827 Query: 716 LANELLFGSLVDGGQVTVALDKEK 739 LA +L L +G + + + K Sbjct: 828 LAELILEDKLHEGEGIVIDAENGK 851 >UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 Tax=Campylobacterales RepID=C3XDZ0_9HELI Length = 898 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 178/546 (32%), Positives = 292/546 (53%), Gaps = 34/546 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L ++ LN A A H++ H LLA+L++ + +AL+ + ++ AL Q L Sbjct: 7 LTNQMREILNNAAQFAITHKNNETQPIHTLLAMLADSNMLLYQALQKNNENINALIQNLT 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I++ V A+ + + + S Q LQ A+ + G + + + + A +S Sbjct: 67 LEIDKLPKVSNANTQ--NMSLSKSLQEALQNALSFATTQGDSFIGVGSFVRANL---DSH 121 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 LL+ + +L+++N + ++ G + +S+ E ++ + NL++L Sbjct: 122 FKDLLK--NIDKLELINTL----------KNMRKGMKIDSQSSDDTLETLDKYGINLSKL 169 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A ++P+IGR +E+ER +Q+L R+ KNNP+L+GE GVGKTA+ EGLA +I + +VP Sbjct: 170 AAQNKLNPVIGRNEEIERMMQILIRKTKNNPILLGEPGVGKTAVVEGLAIKIAKKEVPLS 229 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + + +LD+ +L+AG KYRGDFE+R KA++ +++ + ILFIDEIHTI+GAGA+ GG Sbjct: 230 LQNKQVIALDMTALMAGAKYRGDFEERLKAVVDEVKNNDEIILFIDEIHTIVGAGASEGG 289 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G++R IG+TT +E+ FEKD ALARRFQ ++I EPS E +QI+ Sbjct: 290 -MDAANILKPALARGELRTIGATTLKEYRKYFEKDAALARRFQPVNINEPSQNEALQIMR 348 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+K EAHH+V T A+ +V+L+ +YI +R+LPDKAID+IDEA A ++ S+ K Sbjct: 349 GIKESLEAHHNVSITDGALVESVKLSSRYITNRYLPDKAIDLIDEAAAELKMQIESEPKA 408 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL---KMLVFGQDKA---------- 466 + ++ L+ + L K + G A Sbjct: 409 IAKAKRDIEALEVEKVALNLDKNEQHNTRLQEIEKELIDSKEKLSGLQSAFENEKAIFSD 468 Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYME 526 I + I+ R + G + AG GK K L + S + Sbjct: 469 IAKVKNDIESLRRESEIARR-SGDYARAGEIEHGKIPNAQAELKNLEAKWQDLQKSGSLL 527 Query: 527 RHTVSR 532 +H V++ Sbjct: 528 KHAVTK 533 Score = 317 bits (813), Expect = 8e-85, Method: Composition-based stats. Identities = 195/833 (23%), Positives = 358/833 (42%), Gaps = 130/833 (15%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLA--------LLSNPSAREAL-------EA 46 L++ L+ +L A + A F+ V + A LL N E + + Sbjct: 85 LSKSLQEALQNALSFATTQGDSFIGVGSFVRANLDSHFKDLLKNIDKLELINTLKNMRKG 144 Query: 47 CSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVF-HVQSSGRNEVTG 105 +D + LE +++ L + P + ++R + ++ + N + Sbjct: 145 MKIDSQSSDDTLET-LDKYGINLSKLAAQNKLNPVIGRNEEIERMMQILIRKTKNNPILL 203 Query: 106 ANVLVAIFSEQESQAAYLLRK---HEVSRLDVVNF----ISHGTRKDEPTQSSDPGSQPN 158 V + E A + +K + V+ + G + + Sbjct: 204 GEPGVGKTAVVEGLAIKIAKKEVPLSLQNKQVIALDMTALMAGAKYRGDFEERLKAVVDE 263 Query: 159 SEEQAGGEERMENFTTNLNQLARVGGID------PLIGRE----------KELERAIQ-- 200 + ++ T + A GG+D P + R KE + + Sbjct: 264 VKNNDEIILFIDEIHTIVGAGASEGGMDAANILKPALARGELRTIGATTLKEYRKYFEKD 323 Query: 201 -VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKY 259 L RR + P+ + E + A +I++G + E + S+ G+L+ Sbjct: 324 AALARRFQ--PVNINEPS-------QNEALQIMRG-IKESLEAHHNVSITDGALV----- 368 Query: 260 RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVI 319 + K + +I IDE + S + ++ K R I Sbjct: 369 --ESVKLSSRYITNRYLPDKAIDLIDEAAAELKMQIESEPK---------AIAKAK-RDI 416 Query: 320 GSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHH-------DVR 372 + ++ + +K+ R Q+I E + ++ + ++GL+ +E V+ Sbjct: 417 EALEVEKVALNLDKNEQHNTRLQEI---EKELIDSKEKLSGLQSAFENEKAIFSDIAKVK 473 Query: 373 YTAKAVRAAVELAVKY--------INDRHLPDKAIDVIDEAGARAR-LMPVSKRKKTVNV 423 +++R E+A + I +P+ ++ + S K V Sbjct: 474 NDIESLRRESEIARRSGDYARAGEIEHGKIPNAQAELKNLEAKWQDLQKSGSLLKHAVTK 533 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 I +V+R +IP + +S++ + ++ + LK V GQ+KAIE++ AIK +AGL Sbjct: 534 ESIAEIVSRWTQIPVGKMLESEKHRILHIEENLKASVIGQNKAIESIARAIKRNKAGLND 593 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGY 540 ++P+ SFLF G +GVGKT+ L+K L EL+R DMSEYM+ ++L GA PGY Sbjct: 594 ANRPIASFLFLGSSGVGKTQSAKALAKFLFDSEKELVRLDMSEYMQEIDATKLTGAAPGY 653 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+++GG+LT+A+ + P++V+L DE+EKAHP VFN+LLQV+D+G L+DN G DF+N + Sbjct: 654 VGYEEGGILTEAIKRKPYSVVLFDEVEKAHPKVFNVLLQVLDDGRLSDNKGVVVDFKNTI 713 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAM------------------------------- 629 +++T+N G S + + + A+ Sbjct: 714 IILTSNIGSEFICEDSKEVAMKRDDIAALQKAIKEGNIESREKLEREKEILNSLVEAQRA 773 Query: 630 -------EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV 682 +E+KK F PEF NRLD+ I F+ LS D I ++D ++ ++L + ++L + Sbjct: 774 SQMEKIEQELKKFFRPEFLNRLDDKIIFNALSRDDIRNIIDILTQQVALKLKDRNITLVL 833 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 + +++LA+ G+D GARP+ R +Q ++ LA+ +L L + +V + Sbjct: 834 TDSMKDYLADSGFDPVFGARPLKRAVQREIEDRLADLILNEELSEQSKVIFDI 886 >UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=CLPB_HELPJ Length = 856 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 160/459 (34%), Positives = 261/459 (56%), Gaps = 23/459 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 + +L +L+ A A A H++ +T H+L A+L+N +AL+ VD+ AL+ ++ Sbjct: 7 MTDQLHETLDSAIALALHHKNAEVTPMHMLFAMLNNSQGILIQALQKMPVDIEALKLSVQ 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + + V S++ + Q + + L+ A + G + + L+A + ES Sbjct: 67 SELNKFAKVSQISKQ--NIQLNQALIQSLENAQGLMAKRGDSFIATDAYLLANMNLFESV 124 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 L E+ + +S G + E +E F +L Q Sbjct: 125 LKPYLDTKELQ---------------KTLESLRKGRTIQDKNDDSNLESLEKFGIDLTQK 169 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A +DP+IGR++E+ R +Q+L R+ KNNP+L+GE GVGKTA+ EGLA RIV +VP+ Sbjct: 170 ALENKLDPVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKT 229 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + + +LD+ L+AG KYRG+FE+R K +++++++ N ILFIDEIHTI+GAGA+ GG Sbjct: 230 LLNKRVVALDLSLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGG 289 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G++ IG+TT +E+ FEKD AL RRFQ I + EPSI E +QI+ Sbjct: 290 -MDAANILKPALARGELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILR 348 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLK E HH++ A+ A+ +L+ +YI DR LPDKAID+IDE A+ ++ S + Sbjct: 349 GLKETLETHHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKMQMES---E 405 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 ++ ++ + R+ + ++ K + + LK Sbjct: 406 PAKLSSVKRSIQRLEMEKQALEMENKESNHKRMQEILKE 444 Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats. Identities = 205/804 (25%), Positives = 355/804 (44%), Gaps = 98/804 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTV-----------EHLLLALLSNPSAREALEAC--- 47 LNQ L SL A + F+ E +L L ++ LE+ Sbjct: 85 LNQALIQSLENAQGLMAKRGDSFIATDAYLLANMNLFESVLKPYLDTKELQKTLESLRKG 144 Query: 48 --------SVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSG 99 +L +L + ++ RD + Q ++++ + G Sbjct: 145 RTIQDKNDDSNLESLEKFGIDLTQKALENKLDPVIGRDEEIIRMMQILIRKTKNNPILLG 204 Query: 100 RNEVTGANVLVAIFSE--QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQP 157 V V+ + + LL K V+ ++ + G + + Sbjct: 205 EPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVVALD--LSLLVAGAKYRGEFEERLKKVIE 262 Query: 158 NSEEQAGGEERMENFTTNLNQLARVGGID------PLIGRE----------KELERAIQ- 200 ++ A ++ T + A GG+D P + R KE + + Sbjct: 263 EVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPALARGELHTIGATTLKEYRKYFEK 322 Query: 201 --VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 L RR + P+L+ E + + A +I++G + E + +++ +L+A K Sbjct: 323 DMALQRRFQ--PILLNEPSINE-------ALQILRG-LKETLETHHNITINDSALIASAK 372 Query: 259 YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRV 318 + +I IDE + S P S R Sbjct: 373 -------LSSRYITDRFLPDKAIDLIDEGAAQLKMQMESE----------PAKLSSVKRS 415 Query: 319 IGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDV------- 371 I ++ + E + +R Q+I + E S + +I L+ ++E +V Sbjct: 416 IQRLEMEKQALEMENKESNHKRMQEI-LKELSDLKEEKI--QLEAQFENEKEVFKEISRL 472 Query: 372 RYTAKAVRAAVELAVK---YINDRHLPDKAIDVIDEAGARAR------LMPVSKRKKTVN 422 + + ++ E + Y + I ++ + + + + Sbjct: 473 KMEMEGLKKEAERFKRNGDYQQAAEIEYSKIPEKEKKEKELQHKWETMQQNGALLQNALT 532 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 +I +V++ IP + + QS+++ + N+ L+ V GQ+KA++A+ +AIK +AGL Sbjct: 533 ENNIAEIVSQWTHIPVQKMLQSEKNRVLNIESELQKRVVGQEKALKAIAKAIKRNKAGLS 592 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPG 539 +KP+GSFLF GPTGVGKTE L++ L L+R DMSEYME+H +SRLIGA PG Sbjct: 593 DSNKPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEKHAISRLIGAAPG 652 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+++GG LT+AV + P++V+LLDE+EKAHPDVFN+LLQV+D G LTD+ G + DF+N Sbjct: 653 YVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNT 712 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 +L++T+N + L D E +++ F PEF NRLD II F+ L + I Sbjct: 713 ILILTSNVASGALLEED--LSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAII 770 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719 +V +Q + ++G+++ + ++A+ +AE G+DR GARP+ R + + ++ LA Sbjct: 771 NIVGILFENVQKKALERGINITLDEKAKELIAEAGFDRFYGARPLKRALYEMVEDKLAEL 830 Query: 720 LLFGSLVDGGQVTVALDKEKNELT 743 +L + + VA E NE+ Sbjct: 831 ILEDKIKENDS--VAFVVENNEIV 852 >UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellular organisms RepID=CLPB2_CHLTE Length = 442 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 160/421 (38%), Positives = 246/421 (58%), Gaps = 17/421 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 + + +L A A +++ + EHLL +L + A + + L ++ Sbjct: 8 FTVKAQEALQAASMLASSKQNQQIEPEHLLSVMLGDHDNIACQIARKLETPVDTLLSVVD 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I++ V AS + L +V A+ + ++ ++ +A+ SE + Sbjct: 68 REIDRIPKVTGASATGQYISSDLG--KVFDTALKEAEQLKDEYISSEHLFIAM-SEAGVK 124 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + LL+ + R ++ ++ S + S+ + ++ ++ NLN L Sbjct: 125 VSKLLKDAGIDRNAILKVLT----------SFRGSQRVTSQNAEESYQSLKKYSRNLNDL 174 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 G +DP+IGR+ E+ R +Q+L RR KNNP+L+GE GVGKTAI EG+A RIV GDVPE Sbjct: 175 VIKGKLDPVIGRDDEIRRVLQILSRRTKNNPVLIGEPGVGKTAIVEGIAQRIVGGDVPEN 234 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASG 298 + I +LDI +L+AGTK+RG+FE+R KAL+K+++ D ILFIDE+H ++GAG+A Sbjct: 235 LKSKQIAALDIAALVAGTKFRGEFEERLKALVKEVQASDGEVILFIDELHLLVGAGSAE- 293 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DAAN++KP L+ G++R IG+TT E+ EKD AL RRFQ + + +PS+E+TV I+ Sbjct: 294 GSMDAANILKPALARGELRCIGATTLDEYRKHIEKDAALERRFQTVIVDQPSVEDTVSIL 353 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK KYE HH VR A+ AA EL+ +YI DR LPDKAID+IDEA +R RL S+ + Sbjct: 354 RGLKEKYEIHHGVRIKDAALVAAAELSNRYIADRFLPDKAIDLIDEACSRLRLEIDSEPE 413 Query: 419 K 419 + Sbjct: 414 E 414 >UniRef50_A1ZCV4 ATPases with chaperone activity ClpC, two ATP-binding domain n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZCV4_9SPHI Length = 1137 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 151/570 (26%), Positives = 290/570 (50%), Gaps = 25/570 (4%) Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 G + +E LN L ++ +++ + + +++ R +++G VGK+ + Sbjct: 200 GRDEIEKVGFELNDLYPS-ELNRAFYQDELVTQLDRLIYNRENVPMVILGPRRVGKSTLL 258 Query: 225 EGLAWRIVQGDVPEVMADC-TIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-----EQDT 278 + R ++ + + + ++++D L+AG G +++RF+++++ E Sbjct: 259 HEVVHRYLERNSEKELYHLDNLWNVDPSRLIAGMSIVGMWQRRFESIIRFAMNPITEYPR 318 Query: 279 NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALA 338 L+ + I + G ++ + ++++KP L +I+V+ T +E+ E DR Sbjct: 319 RDKLYFNNIIALFRIGKSAQNDMTLSDVLKPYLQKREIQVVLEATPEEWDIASELDRGFT 378 Query: 339 RRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKA 398 F+ + + EP+ ++++IIN ++ + E+ HD + + + +EL ++ + L Sbjct: 379 DLFKVVRLYEPTETKSLRIINKVRVRLESEHDFKISNTGLLRLIELQKRFNQNMVLIGAI 438 Query: 399 IDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 + + + ++ V+ + + + R+A PE +++ + + Sbjct: 439 AENLHQLSSKYSEEEVTPQTIVEEFSSKTHLNERLA-DPEVKITKDEFQ------QYISR 491 Query: 459 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IE 515 + GQ A++ L + + + +A L + +P GS+LF GPTGVGKT+ ++K L Sbjct: 492 RLVGQQDAVDCLADVLHVIKAQLNNPERPFGSYLFIGPTGVGKTQAAKVVAKYLFNHEDS 551 Query: 516 LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFN 575 L+RFDM+E+++ VSRL+G + + + G LT + +P+ VLL DEIEKAHPDV N Sbjct: 552 LVRFDMNEFIDGGAVSRLVGD----LDYPE-GQLTTKIRYNPYCVLLFDEIEKAHPDVHN 606 Query: 576 ILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE-IKK 634 +LLQV+ G LTD GR F N V++MT+N G ++ D ++ E+ ++ Sbjct: 607 LLLQVLGEGRLTDALGRTISFCNTVIIMTSNLGAERVGKEINIQRRADLASSTYEKSVRD 666 Query: 635 IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAE 692 F PEF NR+DN+I F+ L+ + I Q+ I EL + ++ L VS+E LAE Sbjct: 667 FFRPEFINRIDNVIIFNKLNLEHIGQIAWLQIKELLKRHGFMRRHTILNVSEEVLQKLAE 726 Query: 693 KGYDRAMGARPMARVIQDNLKKPLANELLF 722 G+D MG R + R I+ L +A++L+ Sbjct: 727 NGFDPEMGGRALKRQIEKELTVLIADQLVE 756 >UniRef50_Q1D2Y7 ClpA/B family protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D2Y7_MYXXD Length = 836 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 172/685 (25%), Positives = 290/685 (42%), Gaps = 34/685 (4%) Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 PA + R P + + L A E+ + +A S A Sbjct: 170 RTARKGAPARQSLRVWVPRVDVKGTLHDAADL--EPFVEEMVRHELYLASLDRLHSLAY- 226 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 V V +D P + ++P + + + LN+ AR Sbjct: 227 ------VGEEQVETLSVPVRFRDTPRARALDAAKPQRRQAPP--PGLAEASRCLNEEARA 278 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 G ++ R+ E+ R + + R + + LLVG S VGKTA+ L R + Sbjct: 279 GLLERAWERDLEVSRLAEAVTSRTRASVLLVGPSSVGKTALVHELVQRAEAATTGSPLHG 338 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 ++S G ++AG +Y G +++R K +++ L + + + + + + +D Sbjct: 339 LEVFSSSGGRIMAGMRYLGQWQERVKHMVEALRVRQAVLH--LDSLSELLSLGSGDTGLD 396 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 A + P L SG++ ++ T ++ + A + + I + S + + Sbjct: 397 VARQLLPALESGEVSLVLEATPEDVARAERTHAAFLQSLRHIAVAPLSAQAARNALQQAS 456 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 + VR+T A+ A EL ++ + P A+ ++ A VN Sbjct: 457 HRVGRARKVRFTPDALDRAGELTERFGSGPS-PGGAVSLLRAASTEP------GAAGEVN 509 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 A + P + V + R L R + V GQD+A L + + GL Sbjct: 510 AASVTRAFCTRTGYPLELVDSAIRLDPDALLRRFRERVVGQDEATLLLRNLVVTLKTGLA 569 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPG 539 +P+G+FL GPTGVGKTE + L++ L + L RFDM+EY + +RL+G G Sbjct: 570 DPSRPLGAFLLLGPTGVGKTESALALAEYLFGDVARLARFDMAEYAAPGSATRLVGEAGG 629 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 Q G L V + P V+LLDEIEKA V ++LLQV+ G LTD GR FRN Sbjct: 630 -----QQGSLARRVREQPFGVVLLDEIEKADAGVHDLLLQVLGEGRLTDATGRTVSFRNT 684 Query: 600 VLVMTTNAGVRETERKSIGLIHQ---DNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 V+++T+N G R S+G + + + + F PE NRLD ++ + L+ D Sbjct: 685 VVLLTSNLGADSAGR-SLGFGERGPLERAAHYLGAAAAFFRPELLNRLDRVVPYRALTED 743 Query: 657 VIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 VI + + + + L ++GV + ++ LA G+D GARP+ R ++ + Sbjct: 744 VIQSLARRTLEAALSREGLSRRGVKVTFDEDVVKHLARTGFDARYGARPLKRAVEQQVVA 803 Query: 715 PLANELLFGSLVDGGQVTVALDKEK 739 PLA L + QV + ++ E Sbjct: 804 PLARWLAAQATSAPPQVVLRVEAEG 828 >UniRef50_A9GQS7 ATP-dependent Clp protease, ATP-binding subunit , two ATP-binding domains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GQS7_SORC5 Length = 1217 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 157/624 (25%), Positives = 280/624 (44%), Gaps = 34/624 (5%) Query: 139 SHGTRKDEPTQSSDPGSQPNSE-EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 S E D G+ P ++ G + + N +L Q A G +D + R + E+ Sbjct: 168 SALADLPERPGEDDTGADPAFRWKKRRGLKVLPNLGVSLTQRAAQGNLDAGVPRSPQREQ 227 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD----CTIYSLDIGSL 253 +L R ++VG G GKT + ++ D + + ++ L Sbjct: 228 LALLLGAGRAQPVVVVGPPGCGKTTLIHRAVLDLLAADGYGAHKNLDRVRDVVAVSGRRL 287 Query: 254 LAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS 313 +AG + GD+EKR L++ +IL ID++H G + + A+ + LS Sbjct: 288 IAGMSHLGDWEKRCVELVEDARSRG-AILVIDDLHHFGRIGRSRESERSLADFFRGPLSR 346 Query: 314 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 +I ++G + + F + ++ + A F + + E + ET +++ E H R Sbjct: 347 REIVMVGECSPEAFRLLEQESPSFAALFTPLFLPEATPSETFRLMVREVRALEQRHAARV 406 Query: 374 TAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG--------ARARLMPVSKRKKTVNVAD 425 + +R ++L ++ + LP KAID++ E + + V D Sbjct: 407 SPYVLRTILDLGGSLLSAQALPGKAIDLLREVVRAGVTPSPSGEPGPARGHAPRPVGSQD 466 Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 + ++++ +P + + L + L V GQ +A+ A + + +AGL Sbjct: 467 VLRLLSQKTGVPRLLLGGDEPLDAGALEEELGRRVIGQPEAVRAAADLVSRIKAGLVDPR 526 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P G +LF GPTG GKTE+ +++ + LLRFDMSE +RL+G Sbjct: 527 RPYGVYLFTGPTGTGKTELARCMAELIYGSASRLLRFDMSEQSGPDAPARLVGDR----- 581 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + GLLT V + P +++LLDEIEKAHP V +LLQ+ ++G LTD R A F + V+V Sbjct: 582 YAPDGLLTQRVREQPFSLVLLDEIEKAHPSVHGLLLQLFEDGRLTDAAARPAHFHHAVVV 641 Query: 603 MTTNAGVRETERKSIG----------LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDH 652 MT+N G R G I ++++ + ++ F PE NR+D ++ F Sbjct: 642 MTSNLGARSRALVGFGGAGLSEARALAIAEESAQEVARAVRDFFPPELFNRIDRVVPFRP 701 Query: 653 LSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L+ +V +V +K + L + L ++ V + +A + + GAR + R I+D Sbjct: 702 LTPEVAVRVAEKELDRLLGRRGLAERSVFVRRGAGVAERIAREAFVAEDGARSVKRFIED 761 Query: 711 NLKKPLANELLFGSLVDGGQVTVA 734 + L++ L G+ + + Sbjct: 762 EIGSLLSDALTRGAPAAMQVIRIF 785 >UniRef50_Q03X61 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=2 Tax=Leuconostoc mesenteroides RepID=Q03X61_LEUMM Length = 632 Score = 394 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 186/611 (30%), Positives = 300/611 (49%), Gaps = 64/611 (10%) Query: 161 EQAGGEERMENFTTNLNQLARVGGID-PLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 +Q ++ +TT+++ RE R + L ++ +N PLLVG GVG Sbjct: 5 KQNNTTPYLDRYTTDISAKVMSAPEKYHAYERESITRRIMVSLMKQIQNAPLLVGLPGVG 64 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGD-FEKRFKALLKQLEQDT 278 KTAI E LA +++ V + + + + +L+ + G+ F +F+A++ +L + Sbjct: 65 KTAIVEDLARQLLSTSV-SSLKGKHLVQISLANLMKSSD--GESFAHKFQAIIDELIANK 121 Query: 279 N-SILFIDEIHTIIGAGA-ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 + I FIDEIH I+G GA SG +DA N+IKP LS +++IG+TT +EF +D A Sbjct: 122 DTVIAFIDEIHQIVGTGAETSGSSLDAGNIIKPALSRDDLQIIGATTTKEFHEYVARDGA 181 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L RRF I++ E S E+T +++ + + ++ + + L+ +YI DR+ P+ Sbjct: 182 LMRRFDLIEVPELSFEQTKNVLSKVA--LQLNNGIEVPETVQDRIMALSQRYITDRYFPE 239 Query: 397 KAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL 456 KAI ++D A + ARL + T++ D+ +++ +PE ++Q+ + L NL RL Sbjct: 240 KAIMLLDGALSVARLDN----RPTLSNQDVATIIHDDYHVPEYVINQTTDERLLNLLPRL 295 Query: 457 KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE- 515 K V GQD A+E + + AGL KP SFLF GPTGVGKTE QL+ L Sbjct: 296 KSQVIGQDTALEKVAMKLTNREAGLADTSKP-ESFLFMGPTGVGKTETAKQLALNLFGNK 354 Query: 516 --LLRFDMSEYMERH-TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 +RFDMSE+ ++ R LT V P+AVLLLDEIEKA P+ Sbjct: 355 QNFIRFDMSEFKFAGTSLERF------------KDQLTTRVRHTPYAVLLLDEIEKADPE 402 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEI 632 V ++LLQV+D+G L+D GR +F+++++VMTTN+G + Sbjct: 403 VMDLLLQVLDDGRLSDEYGRVINFKDLIIVMTTNSGATAVMNRDAKSDAVKEDKKRQANF 462 Query: 633 KKIF---------TPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSL--- 680 ++ PEF R+ II FD L + ++V+ + L + + G ++ Sbjct: 463 EEQLEIALQSDGYRPEFIARIGAIIVFDVLKMADMVRIVELKLSRLNQKAQESGFNIVFD 522 Query: 681 ----------------------EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 EVS N++A+ GY + G RP+ I + P++ Sbjct: 523 TQEVARYIPSFDLGFEYLNGTQEVSSPIANYIADVGYKPSRGVRPIDDTIATYVSDPVSA 582 Query: 719 ELLFGSLVDGG 729 ++ G Sbjct: 583 AIIQKRQGLGQ 593 >UniRef50_Q9MTD7 Clp n=136 Tax=Apicomplexa RepID=Q9MTD7_TOXGO Length = 765 Score = 394 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 185/772 (23%), Positives = 358/772 (46%), Gaps = 61/772 (7%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 +E+ + L + A ++ +T H++ +L+ + + + + L + L+ +I Sbjct: 15 TKEVLIILIYSKILASLFKNNSITFFHIICSLILQSNLFKLI----IGKKNLLKFLQLYI 70 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 + + + F L ++ + N + ++L Sbjct: 71 KNNFKQTQLNYNILFSYTLFKFFNNLNKSFINTWKLTINLLQYNSILFK-------YILI 123 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 L K + + +++N I +P + + N+ +N Sbjct: 124 YLFKVKSNTYNLINSI-----------IFKFNDKPINNLYFNNLIKPFNYKSNFYN---- 168 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 +I R+ + ++L R+ NP+L+G+ G+GK +I + ++ I + + Sbjct: 169 -----IINRKSDCVYLYEILNRKIIRNPILLGDFGIGKNSIIKKFSFFIEKFKLKFNNIT 223 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG--- 299 ++ L+I +LL K + K K L+++ N IL +I + Sbjct: 224 KNLWILNIVTLLKYIKTNNLY---IKKFFKFLQENKNIILICPKIEILFNTYYTDSNIYQ 280 Query: 300 QVDAANLIKP---LLSSGKIRVIG-STTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 +++ + + + K+++IG S + F ++ L F+KI + E S +E Sbjct: 281 NLESYSFLFKFFNYIKQNKLQLIGLSNNITDIEKKFNINQELNFLFEKIYVKELSNKEIF 340 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA---RLM 412 +I+ +E +++ + K ++ + + YI K+I ++D ++ + Sbjct: 341 KILLKKSSLFEKYYNCSISFKIIKHILYYSQTYIKQHKTLLKSIWLLDNTCSKIYVNQKF 400 Query: 413 PVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDT---LKNLGDRLKMLVFGQDKAIEA 469 + K + ++DI+ + ++ + + T + L L+ +FGQ AI Sbjct: 401 HLLKNNNKLALSDIQKTLTKLINLSTNLLFNKANKTNFDIIALRKNLQKSLFGQPTAISK 460 Query: 470 LTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYME 526 + ++K GL +KP+GS+L GP+G GKTE+ L+K L +L+RFDMSE+ME Sbjct: 461 ILISLKRVFTGLKQINKPIGSWLLCGPSGTGKTELAKLLAKFLFGSEADLIRFDMSEFME 520 Query: 527 RHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTL 586 +H++S+LIGAPPGYVG+ + GLLT+A+ K P VLL DEIEKAH D+ N++LQ++D+G L Sbjct: 521 KHSLSKLIGAPPGYVGYGKSGLLTEAIAKKPFTVLLFDEIEKAHKDINNLMLQLLDDGKL 580 Query: 587 TDNNGRKADFRNVVLVMTTNAG-----VRETERKSIGLIHQDN----STDAMEEIKKIFT 637 TD+ G+ DF N ++ T+N G KS + + N S I+ F Sbjct: 581 TDSLGKCVDFSNTLIFFTSNLGFPTNSYELQFLKSGTKLSKKNYKILSNKVESAIQSYFK 640 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKG--VSLEVSQEARNWLAEKGY 695 PEF NRLD+II F L+ + +++KF+ + ++L + L++ + LA+ Y Sbjct: 641 PEFLNRLDDIIIFKPLNINFFKYIINKFLKNIYLKLYNNQIPIFLDIDSNIKTLLAKLAY 700 Query: 696 DRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 GARP+ R+++ ++KP+++ L+ S ++ L+K+ + Y F+ Sbjct: 701 HPLYGARPLKRLLELIIEKPISDLLINFSFNRIIIFSIFLNKKTFNINYSFK 752 >UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organisms RepID=Q4UAC3_THEAN Length = 1150 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 152/463 (32%), Positives = 252/463 (54%), Gaps = 40/463 (8%) Query: 8 LSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTP 67 ++ A E ++ + LL +L+++ + + L +++ L++ELE +++ Sbjct: 135 EAITSLTEIANEFDSSYVEGDMLLYSLINDDNVLKVLNNLGLNVDNLKKELENHLKK--Q 192 Query: 68 VLPASEEERDTQPTLSFQRVLQRAVFHVQSSG-----------------------RNEVT 104 + + + VL + + G ++ Sbjct: 193 IRMSGSFGDRKILGRILENVLNISKRYKSEFGVSSITVLAHTATNPPKGSYIVPLDKYIS 252 Query: 105 GANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAG 164 ++L+ + +E L K++++ + + + K + T + Sbjct: 253 VEHLLLGLAAEDTKFFRPYLTKYKITLEKLKDTVLSIRGKRKIT----------TRNTEN 302 Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 + + F+ +L +AR G +DP+IGR+ E+ R I++L RR KNNP+L+G+ GVGKTAIA Sbjct: 303 SYKLLNKFSKDLTDMARNGKLDPVIGRDNEIRRTIEILSRRTKNNPVLLGDPGVGKTAIA 362 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILF 283 EGLA RIV GDVP+ + + + SLDI +++AGT YRG+FE+R K +L ++E ++F Sbjct: 363 EGLANRIVSGDVPDSLKNRKVISLDIAAIVAGTMYRGEFEERLKEILNEIENSQGEIVMF 422 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDEIHT++GAG S G +DA N++KP+L+ G++R IG+TT QE+ EKD+AL RRFQ Sbjct: 423 IDEIHTLVGAGE-SQGSLDAGNILKPMLARGELRCIGATTLQEYRQKIEKDKALERRFQP 481 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 I I EP+IEET+ I+ GLK +YE HH VR + AV L+ +YI DR+LPDKAID+ID Sbjct: 482 IYIDEPNIEETINILRGLKERYEVHHGVRILDSTLIQAVLLSNRYITDRYLPDKAIDLID 541 Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDR 446 EA A+ + + K + + IE + ++ ++ +D Sbjct: 542 EAAAKLK---IQLSSKPLQLDIIERKLLQLEMEKISIINDNDN 581 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 115/362 (31%), Positives = 193/362 (53%), Gaps = 58/362 (16%) Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 IP + +S ++ + L + L + GQ +AI+A+ A++ +R G+ KP+ + +F G Sbjct: 783 IPLNKLIKSQKEKILQLNEELHKRIIGQQEAIDAVVNAVQRSRVGMNDPKKPIAALMFLG 842 Query: 496 PTGVGKTEVTVQLSKALG------------------IELLRFDMSEYMERHTVSRLIGAP 537 PTGVGKTE++ +++ L ++RFDMSEYME+H+VS+L+GAP Sbjct: 843 PTGVGKTELSKAIAEQLFDSGITLRCLLPRPPTTTKDAIIRFDMSEYMEKHSVSKLVGAP 902 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEI-------------------EKAHPDVFNILL 578 PGY+G++QGGLLT+A+ + P+++LL DE+ H DV+NILL Sbjct: 903 PGYIGYEQGGLLTEAIRRKPYSILLFDEMYLHYGACSSPTGVLSYILKSTTHSDVYNILL 962 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET-ERKSIGLIHQDNSTDAMEEIKKIFT 637 QV+D+G LTD+ GRK +F N +++ T+N G + E + M +++ F+ Sbjct: 963 QVLDDGRLTDSLGRKVNFTNSLIIFTSNLGSQNILELARFPEKRNEMKNKVMTSVRQNFS 1022 Query: 638 PEFRNRLDNIIWFDHLS--------------------TDVIHQVVDKFIVELQVQLDQKG 677 PEF NR+D I FD L+ + ++V+ +++L +L +K Sbjct: 1023 PEFLNRIDEFIVFDSLTKIGTLRCSVTVLGHTVTNTPKRELKKIVNMEMMKLSNRLAEKN 1082 Query: 678 VSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDK 737 + L + A + +A+ GYD A GARP+ R IQ ++ P+A +L + + ++ Sbjct: 1083 IKLSIDDAAMSHIADIGYDPAYGARPLKRTIQKQIESPIAVGILSDQYKEHDNLHISYKD 1142 Query: 738 EK 739 K Sbjct: 1143 GK 1144 >UniRef50_A1ZYY8 ATP-dependent Clp protease, ATP-binding subunit ClpC, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYY8_9SPHI Length = 1144 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 158/593 (26%), Positives = 278/593 (46%), Gaps = 29/593 (4%) Query: 155 SQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVG 214 S+ +Q E + L+ L G KE ++ + + + +N+ L+VG Sbjct: 173 SEQEDIQQRDQESILPQIAHRLSANEVE-----LFGLTKEYDQLLTTMKAKHRNSVLVVG 227 Query: 215 ESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL 274 SG GKTA+ + Q ++D +++ + LL G +E+ + ++L Sbjct: 228 GSGKGKTALIKEFCRVKGQ----HGLSDVSVWEVSAAQLLHRLTGLGSWEEYLADVCREL 283 Query: 275 EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD 334 + + IL++ + G G + A+ ++ +S G+I +I T +E S I + Sbjct: 284 RKSGD-ILYVSNFSELFEVGQYVGNNMSMADYLRDYISRGEITIISECTPEEASRIEMRS 342 Query: 335 RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHL 394 I+I + S E+ ++I+ + +A++ + L Y L Sbjct: 343 PGYLGLLNTINIEDMSDEQVLEIVTKKVNYIATQKNCAVEEEAIQEILRLQQWYTPYSEL 402 Query: 395 PDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD 454 P K I + + + K I + +PE ++ + + Sbjct: 403 PGKTIHFLASIVSDKEKKEIKIIDKPA----IFERFCQETGMPEFMINPEIALEVDKMQH 458 Query: 455 RLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG- 513 + ++GQ++AI +++ + +A + KP+ S LF GPTGVGKTE+ L++ + Sbjct: 459 YFQTNIYGQNEAIHTVSDLLVAIKAAVVRRGKPLASLLFVGPTGVGKTEMAKVLAQFMFG 518 Query: 514 --IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHP 571 +++RFDMSEY + + RL G G GLLT ++ + P +VLL DE+EK HP Sbjct: 519 NRNKMIRFDMSEYTDTRAIMRLTGD-----GTSGEGLLTSSIRQDPFSVLLFDELEKVHP 573 Query: 572 DVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA--- 628 +++LLQ++ G LTD GR ADF + +++MT+N G R + SIG + N +A Sbjct: 574 SFYDLLLQILGEGRLTDARGRVADFCSTIIIMTSNIGARSFQTGSIGFVETKNEAEAAAA 633 Query: 629 --MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS--Q 684 E++ F PE NRLD +I F L ++ +++D+ I ++ + KG +LEV+ Q Sbjct: 634 HFKSEVQAYFRPELFNRLDRVIAFAPLDKPIVRKIIDREIDLVKKREGIKGRNLEVNIGQ 693 Query: 685 EARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDK 737 ++L +KGY+ GAR + R +Q L PL+ L + QV V L K Sbjct: 694 NVLDYLGKKGYNANYGARFLQRTLQTQLIVPLSQALNEYDFLQPLQVDVFLKK 746 >UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=Proteobacteria RepID=B6R3N5_9RHOB Length = 901 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 168/473 (35%), Positives = 257/473 (54%), Gaps = 27/473 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 LN ++ A + + H+ +T+EH L++L S P R +++ +VD+ L + Sbjct: 13 LNPCCRQAVEEAASLCVSNSHQEVTIEHFLISLASQPAVDFRLLIQSQNVDVDVLNEAFR 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSE--- 115 A + V E +R + Q +LQ A G+ V VL+A+ ++ Sbjct: 73 ATFNRYRRV----EADRTPTFSPLLQDLLQDAWLIASVEQGKKTVRSGAVLIALLNDRGR 128 Query: 116 --QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFT 173 Q L R + L + ++ G+ + + G ++ + A G + + Sbjct: 129 YMQMDYYPLLERVSSDTLLRQFDELTAGSFEKDHRAGQGAGGAASAGDTAEG--FLHKYG 186 Query: 174 TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 TN QLA+ G IDP+ R+ E+ + I++LCRRRKNNP+ VGE+GVGKTA+AEGLA RI Sbjct: 187 TNFTQLAKDGKIDPIFCRDNEIRQIIEILCRRRKNNPICVGEAGVGKTALAEGLALRIAN 246 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIG 292 G+VPE A+ ++ LD+G+L AG +G+FEKR K ++ ++ ILFIDE HT+IG Sbjct: 247 GEVPEDFANVALWGLDVGALQAGASMKGEFEKRLKGVIDEVRSSAEPIILFIDEAHTLIG 306 Query: 293 AGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIE 352 AG GG DAANL+KP L+ G+++ I +TT+ E+ FEKD AL RRFQ + + EP+I+ Sbjct: 307 AGGDQGGS-DAANLLKPALARGELKTIAATTWTEYKKYFEKDPALTRRFQLVKLDEPTID 365 Query: 353 ETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM 412 E + I+ GLK YE H V T +A+ A+V LA +YI R LPDKAIDV+D A AR R Sbjct: 366 EAIIIMRGLKKAYEEAHGVYITEEAIGASVRLAARYITGRQLPDKAIDVLDTACARVRAG 425 Query: 413 PVSKRKKTVNVADIESVVARIARIPEKS--------VSQSDRDTLKNLGDRLK 457 + V + D+E + ++ E + + LK + D++ Sbjct: 426 ANT---PPVELQDVEQSLQTLSWEREGLERDQLTAPLEPEQLERLKAIADQIN 475 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 129/434 (29%), Positives = 210/434 (48%), Gaps = 28/434 (6%) Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH-----LP------- 395 EP E ++ I E + + A V LA +I R P Sbjct: 460 EPEQLERLKAIADQINDLEERKQELSSR--LEAQVALAENFIAAREDLFQKQPETQEEDA 517 Query: 396 ---DKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNL 452 D+A+ V + V A+I ++++ IP S+ Q D L L Sbjct: 518 LEQDRALLVSHKNALIEEAGSEPLISVEVGSAEIAAIISDWTGIPVNSMVQDDYHRLLTL 577 Query: 453 GDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 + +K + GQD AI+A+ ++ +R L + +P+G F AGP+GVGKTE +++S+ L Sbjct: 578 AETMKKAIKGQDHAIDAIEARLRASRLDLHKKGQPLGVFFLAGPSGVGKTETALEVSRRL 637 Query: 513 --GIELLR-FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA 569 G E + +MSEY ERHTVSRLIG+PPGYVG+ +GG+LT+A+ K P++V+LLDE+EKA Sbjct: 638 FGGEEFITTINMSEYQERHTVSRLIGSPPGYVGYGEGGVLTEAIRKKPYSVVLLDEVEKA 697 Query: 570 HPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETE------RKSIGLIHQD 623 P+V N+ Q D G L D GR D RNVV +T+N G + E H Sbjct: 698 DPNVLNLFYQAFDKGELADGEGRLIDCRNVVFFLTSNLGSDQIENWVANAEDDQVPSHGS 757 Query: 624 NSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEV 682 + F P R++ +++ LS +V+ +V + +L L + + ++L + Sbjct: 758 MLKSLTPLFAQHFKPALLARMEPLVYM-PLSEEVLADIVQMRLDDLIELLKETQKIALTI 816 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 ++ + + + GAR + +VIQ L L+ E+L ++ +D +++ Sbjct: 817 TEATYGRVTQMCRVASNGARLVDQVIQRQLLPTLSIEILEAGHRGEHIASITIDSPEDDG 876 Query: 743 TYGFQSAQKHKAEA 756 + F + + A A Sbjct: 877 GFSFSAVFQEDAVA 890 >UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organisms RepID=Q8IB03_PLAF7 Length = 1070 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 153/414 (36%), Positives = 245/414 (59%), Gaps = 16/414 (3%) Query: 37 NPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ 96 + A L+ +D L QE++ ++++ P +P+ E+ + Q VL + + Sbjct: 194 DGLAERILKESGIDTQLLVQEIDDYLKKQ-PKMPSGFGEQKI-LGRTLQTVLSTSKRLKK 251 Query: 97 SSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQ 156 ++ ++L++I SE L K+ V+ V + K + T Sbjct: 252 EFNDEYISIEHLLLSIISEDSKFTRPWLLKYNVNYEKVKKAVEKIRGKKKVT-------- 303 Query: 157 PNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGES 216 S+ + +E ++ +L LAR G +DP+IGR+ E+ RAIQ+L RR KNNP+L+G+ Sbjct: 304 --SKTPEMTYQALEKYSRDLTALARAGKLDPVIGRDNEIRRAIQILSRRTKNNPILLGDP 361 Query: 217 GVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE- 275 GVGKTAI EGLA +IVQGDVP+ + + SLD+ SL+AG KYRGDFE+R K++LK+++ Sbjct: 362 GVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLDMSSLIAGAKYRGDFEERLKSILKEVQD 421 Query: 276 QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDR 335 + ++FIDEIHT++GAGA + G +DA N++KP+L+ G++R IG+TT E+ EKD+ Sbjct: 422 AEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARGELRCIGATTVSEYRQFIEKDK 481 Query: 336 ALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLP 395 AL RRFQ+I + +PS++ET+ I+ GLK +YE HH VR A+ A L+ +YI+ R LP Sbjct: 482 ALERRFQQILVEQPSVDETISILRGLKERYEVHHGVRILDSALVQAAVLSDRYISYRFLP 541 Query: 396 DKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTL 449 DKAID+IDEA + + + K + + +IE + ++ + ++ Sbjct: 542 DKAIDLIDEAASNLK---IQLSSKPIQLENIEKQLIQLEMEKISILGDKQKNLF 592 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 130/394 (32%), Positives = 224/394 (56%), Gaps = 12/394 (3%) Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH--LPD--KAIDVIDEAGARARLMP 413 I +K + + V+ + +L + R LPD K + +E Sbjct: 679 IRAIKERIDV---VKIEIEKAERYFDL-NRAAELRFETLPDLEKQLKKAEENYLNDIPEK 734 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 K V DI ++V+ I + +S+++ + NL + L + GQD A++ +T+A Sbjct: 735 SRILKDEVTSEDIVNIVSMSTGIRLNKLLKSEKEKILNLENELHKQIIGQDDAVKVVTKA 794 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTV 530 ++ +R G+ + +P+ S +F GPTGVGKTE++ L+ L ++ FDMSEYME+H++ Sbjct: 795 VQRSRVGMNNPKRPIASLMFLGPTGVGKTELSKVLADVLFDTPEAVIHFDMSEYMEKHSI 854 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 S+LIGA PGYVG++QGGLLTDAV K P++++L DEIEKAHPDV+N+LL+V+D G L+D Sbjct: 855 SKLIGAAPGYVGYEQGGLLTDAVRKKPYSIILFDEIEKAHPDVYNLLLRVIDEGKLSDTK 914 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN-STDAMEEIKKIFTPEFRNRLDNIIW 649 G A+FRN +++ T+N G + + ++ M+ +++ F PEF NR+D+ + Sbjct: 915 GNVANFRNTIIIFTSNLGSQSILDLANDPNKKEKIKEQVMKSVRETFRPEFYNRIDDHVI 974 Query: 650 FDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 FD LS + ++ + I ++ +L K + + +++ +K YD + GARP+ RVIQ Sbjct: 975 FDSLSKKELKEIANIEIRKVANRLFDKNFKITIDDAVFSYIVDKAYDPSFGARPLKRVIQ 1034 Query: 710 DNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 ++ +A +L + V+ + ++L +K + Sbjct: 1035 SEIETEIAVRILDETFVENDTINISLKDQKLHFS 1068 Score = 42.8 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 2/85 (2%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQEL 58 +L + L+ L+ + +E E++++EHLLL+++S S R L +V+ +++ + Sbjct: 234 ILGRTLQTVLSTSKRLKKEFNDEYISIEHLLLSIISEDSKFTRPWLLKYNVNYEKVKKAV 293 Query: 59 EAFIEQTTPVLPASEEERDTQPTLS 83 E + E S Sbjct: 294 EKIRGKKKVTSKTPEMTYQALEKYS 318 >UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVK9_9DELT Length = 873 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 171/494 (34%), Positives = 263/494 (53%), Gaps = 25/494 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS---NPSAREALEACSVDLVALRQEL 58 N + + + + A + H+ +T HL+ +LL+ NP+ AL+ DL L + Sbjct: 6 FNLKSQELIESSSRLAVKKEHQHVTPWHLMSSLLNIGKNPTLT-ALQESGADLDKLGGRV 64 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + L ++++ + +R+ A + + + ++L+A QE Sbjct: 65 STSLLAQPKALASAQQTP---ISRDLERLFINAQEIAEKAEEKYIGINHILLAALEIQEL 121 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 A L + R + + D P Q PG E + +T +L + Sbjct: 122 AGA--LEEAGADREKLTLALQQVRSVDGPGQGKAPG---------DDFEYLAQYTKDLTE 170 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR G +DP+IGRE+E+ A Q+L RR KNNP+++GE GVGKTA+ EGLA RIV GDVPE Sbjct: 171 SARQGELDPVIGREEEIRMASQILSRRLKNNPIIIGEPGVGKTAVVEGLAQRIVNGDVPE 230 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + D +I +LD+G L+AG KYRG+FE+RFK +L+++ N I FIDEIH ++GAG + Sbjct: 231 SLQDVSILALDLGQLIAGAKYRGEFEERFKRVLQEITDAGNIITFIDEIHMLVGAGGSE- 289 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DAANLIKP LS G IR +G+TT +E+ EKD AL RRFQ + + EP ++T+ I+ Sbjct: 290 GTMDAANLIKPALSRGDIRCVGATTSEEYRKHIEKDSALMRRFQTVTVEEPDHDKTLAIL 349 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 G+K KYE HH + + ++ A+ +L+ +YI+DR LPDKAID++D+AGA R+ SK + Sbjct: 350 RGIKGKYETHHGIHISDSSLGASAKLSQRYISDRFLPDKAIDLMDQAGAALRISLASKPE 409 Query: 419 KTVNVADIE---SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEA---LTE 472 + + A + +S + ++N LK +A E E Sbjct: 410 DIDKIDQQIVELEIEAGALQGETDRLSMQRLEVVQNTLADLKEQSRTMTEAWEQQKEAAE 469 Query: 473 AIKMARAGLGHEHK 486 + AR L K Sbjct: 470 TLAKARKTLDDAKK 483 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 142/412 (34%), Positives = 237/412 (57%), Gaps = 14/412 (3%) Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 ++ + + ++ K + E + + EL K I + + D A Sbjct: 470 TLAKARKTLDDAKKELEQ----KVRQEDFSRVAELQYKIIPEAEQVLAEYENFD-----A 520 Query: 410 RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEA 469 P + + + DI + V+R IP + + +++ L D L+ V GQD+ +E Sbjct: 521 DQEPENGSPRALLPQDIAACVSRWTGIPVSKLMEEEKERWLQLEDYLRKRVVGQDQVLET 580 Query: 470 LTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYME 526 +++A++ +RAG+ ++P+GSFL GPTGVGKTE+ L++ L + L+R DMSE+ME Sbjct: 581 ISKAVRRSRAGVQDPNRPLGSFLMLGPTGVGKTEMAKALAEFLFDDERSLVRIDMSEFME 640 Query: 527 RHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTL 586 +H+V+RL GAPPGYVG+++GG+LT+ + + P++V+L DE+EKAHPD FN+ LQV+D+G L Sbjct: 641 KHSVARLTGAPPGYVGYEEGGVLTNKIRRRPYSVVLFDEVEKAHPDAFNLFLQVLDDGRL 700 Query: 587 TDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDN 646 TD GR F N V++MT+N G E Q + M+ ++ F PEF NRLD+ Sbjct: 701 TDGQGRTTHFYNTVILMTSNLGAETIEPAETEEEVQKMRSTLMDVVRGFFRPEFLNRLDD 760 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 I+ + L+ +V+ +VD + L L +G+ +++S EA++ LA+ G++ GARP+ R Sbjct: 761 ILICNPLTPEVMPPIVDIQLKRLNKLLADRGIEMDISDEAKHLLAQDGFNPLYGARPLKR 820 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 IQ +L+ PLA L+ + +GG + V + E LT + +Q + ++A Sbjct: 821 AIQTSLQDPLAEMLIKEGMDEGGSINVDV--EDGRLTIRKEESQHEEPDSAE 870 >UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=HSP98_NEUCR Length = 927 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 168/509 (33%), Positives = 269/509 (52%), Gaps = 36/509 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS---NPSAREALEACSVDLVALRQEL 58 + +L A A A ++ H + HL +ALL +PS + RQ + Sbjct: 7 FTDRAKKALEDAMALAEQYAHSQLLPVHLAVALLDPLPDPSKDQQNAPAGATSSLFRQVI 66 Query: 59 EAF----------IEQTTPVLPASEEERD-TQPTLSFQRVLQRAVFHVQSSGRNEVTGAN 107 E +++ LP+ + D SF VL++A ++ + + Sbjct: 67 ERAHGDPQLFDRALKKALVRLPSQDPPPDHVSMAPSFHTVLRKANELQKTQKDTYIAVDH 126 Query: 108 VLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEE 167 ++ A+ E L++ + + +V R + S + ++ E Sbjct: 127 LITALAEEPS--IMNALKEANIPKPKLVTDAIQAIRGTKRVDSRNADTEEEH-------E 177 Query: 168 RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGL 227 + FT ++ +AR G IDP+IGRE+E+ R I++L RR KNNP+L+GE GVGKT + EGL Sbjct: 178 NLAKFTIDMTAMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTVVEGL 237 Query: 228 AWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN-SILFIDE 286 A RIV DVP+ +A+C + SLD+G+L+AG+KYRG+FE+R K +LK++ + ILFIDE Sbjct: 238 AQRIVNADVPDNLANCKLLSLDVGALVAGSKYRGEFEERMKGVLKEISESKEMIILFIDE 297 Query: 287 IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 IH ++GAGA+ G +DAANL+KP+L+ G++ IG+TT E+ EKD A RRFQ++ + Sbjct: 298 IHLLMGAGASGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVIV 357 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EPS+ ET+ I+ GLK KYE HH V + A+ AA LA +Y+ R LPD AID+IDEA Sbjct: 358 KEPSVSETISILRGLKEKYEVHHGVTISDAAIVAAANLAARYLTSRRLPDSAIDLIDEAA 417 Query: 407 ARARLMPVSKRKKTVNVADI-------ESVVARIARIPEKSVSQSDRDTLKNLGDRLK-- 457 A R+ S+ + ++ ++R K+ + + +N+ + L+ Sbjct: 418 AAVRVARESQPEIIDSLERKLRQLKIEIHALSREKDEASKARLEQAKKDAENVEEELRPL 477 Query: 458 MLVFGQDKAIEALTEAIKMARAGLGHEHK 486 + Q+ + +A++ AR L + Sbjct: 478 REKYEQE---KQRAKALQEARMKLESLRQ 503 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 150/440 (34%), Positives = 235/440 (53%), Gaps = 36/440 (8%) Query: 332 EKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH-------HDVRYTAKAVRAAVEL 384 EKD A R ++ ++EE + L+ KYE + R +++R E Sbjct: 451 EKDEASKARLEQAKKDAENVEEE---LRPLREKYEQEKQRAKALQEARMKLESLRQKAEE 507 Query: 385 AVK---YINDRHLPDKAIDVIDEAGARARLMPV---------------SKRKKTVNVADI 426 A + + L AI + R + V I Sbjct: 508 ASRMGDHSRAADLQYYAIPEQEAVIKRLEKEKAAADAALNAAAAETGGAMITDVVGPDQI 567 Query: 427 ESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 +VAR IP + S+++ L ++ L +V GQ +A+++++ AI++ R+GL + ++ Sbjct: 568 NEIVARWTGIPVTRLKTSEKEKLLHMEKHLSKIVVGQKEAVQSVSNAIRLQRSGLSNPNQ 627 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGF 543 P SFLF GP+G GKT +T L++ L + ++RFDMSEY ERH++SR+IGAPPGYVG Sbjct: 628 PP-SFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRFDMSEYQERHSLSRMIGAPPGYVGH 686 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 D GG LT+A+ + P ++LL DE+EKA +V +LLQ+MD+G +TD GR D RN ++VM Sbjct: 687 DSGGQLTEALRRKPFSILLFDEVEKAAKEVLTVLLQLMDDGRITDGQGRVVDARNCIVVM 746 Query: 604 TTNAGVRETERKSIGLIHQDNSTD--AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 T+N G R + D +T M ++ F PEF NR+ +I+ F+ L+ I ++ Sbjct: 747 TSNLGAEYLSRPNAKDGKIDPTTRELVMNALRNYFLPEFLNRISSIVIFNRLTRREIRKI 806 Query: 662 VDKFIVELQVQL--DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719 V+ I E+Q +L + + V +EVS+EA++ L GY A GARP+ RV++ + LA Sbjct: 807 VELRIAEIQKRLQDNDRNVKIEVSEEAKDKLGALGYSPAYGARPLQRVLEKEVLNRLAVL 866 Query: 720 LLFGSLVDGGQVTVALDKEK 739 +L GS+ DG V + K Sbjct: 867 ILRGSIRDGEVARVVVQDGK 886 >UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organisms RepID=CLPB_STAAR Length = 869 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 150/461 (32%), Positives = 255/461 (55%), Gaps = 19/461 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 + ++ +L A +++H+ + + +E +L A L+ + + LE ++++ L + E Sbjct: 6 MTYAVQSALQQAVELSQQHKLQNIEIEAILSAALNESESLYKSILERANIEVDQLNKAYE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + V + + +++ +A +++ ++ ++L + ++ Sbjct: 66 DKLNTYASVE-GDNIQYGQYISQQANQLITKAESYMKEYEDEYISMEHILRSAMDIDQTT 124 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 Y+ K ++V+ I R G+ S+ E + + +L + Sbjct: 125 KHYINNK-----VEVIKEIIKKVRG---------GNHVTSQNPEVNYEALAKYGRDLVEE 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 R G +DP+IGR++E+ I++L R+ KNNP+L+GE GVGKTAI EGLA RIV+ DVPE Sbjct: 171 VRQGKMDPVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPES 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASG 298 + D T++ LD+ +L+AG KYRG+FE+R KA+LK++++ D ILFIDEIH ++GAG G Sbjct: 231 LLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDG 290 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA N++KP+L+ G++ IG+TT E+ EKD AL RRFQK+ ++EP +E+T+ I+ Sbjct: 291 A-MDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTISIL 349 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK +YE +H VR +A+ AA EL+ +YI DR LPDKAID++D+A A R S Sbjct: 350 RGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPT 409 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 + V + + + + L+ L + L Sbjct: 410 ELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANE 450 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 156/432 (36%), Positives = 249/432 (57%), Gaps = 12/432 (2%) Query: 325 QEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVEL 384 +E +N EK AL R + +++E ++ + E T + A EL Sbjct: 445 EELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQ----TNNNLEKAAEL 500 Query: 385 AVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQS 444 I L + ++ D ++ V +I +V++ IP + ++ Sbjct: 501 QYGTIP--QLEKELRELEDNFQDEQGEDSDRMIREVVTDEEIGDIVSQWTGIPVSKLVET 558 Query: 445 DRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEV 504 +R+ L +L D L V GQDKA++ +++A+ ARAG+ ++P+GSFLF GPTGVGKTE+ Sbjct: 559 EREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTEL 618 Query: 505 TVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVL 561 L+ +L ++R DMSEYME+H VSRLIGAPPGY+G D+GG LT+AV ++P++V+ Sbjct: 619 AKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVI 678 Query: 562 LLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER--KSIGL 619 LLDE+EKAH DVFN+LLQ++D G LTD+ GR DF+N +++MT+N G + K G Sbjct: 679 LLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKETGE 738 Query: 620 IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVS 679 I + M + F PE NR+D+I+ F LS D + +VDK + +L ++L ++ +S Sbjct: 739 ITESTEKAVMTSLNAYFKPEILNRMDDIVLFKPLSIDDMSMIVDKILTQLNIRLLEQRIS 798 Query: 680 LEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 +EVS +A+ WL ++ Y+ GARP+ R +Q ++ PLA ++ +G + V L+ + Sbjct: 799 IEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLARMMIKEGFPEGTTIKVNLNSDN 858 Query: 740 NELTYGFQSAQK 751 N LT+ + + Sbjct: 859 N-LTFNVEKIHE 869 >UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria RepID=CLPB_BLOFL Length = 872 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 163/461 (35%), Positives = 253/461 (54%), Gaps = 16/461 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP---SAREALEACSVDLVALRQEL 58 ++ +L+L+ A + A ++F+ H++ L S R L ++ L + + Sbjct: 6 FDRSFQLALSDAQSIAIGKDNQFIEPVHVMYTFLKEKKYKSIRNLLIHAGSNVDQLYKSV 65 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E P + + + +R+ Q + + ++L Q N + ++A Q+ Sbjct: 66 EQVCND-LPRVESVDGDREVQCSHALVKILNLCDKLAQKYHSNIIFSEVFIIAALQSQD- 123 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 + LL+K + + + + Q + + + +E FT ++ Sbjct: 124 VLSILLKKSGIVKELLEKLV----------QYEQSNYSIHDDSFKNRTQILEQFTVDITS 173 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 LA +DP+IGR++E+ R IQVL RR KNNP+L+G GVGKTAI EGLA RI+ +VPE Sbjct: 174 LAEQNNLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGNPGVGKTAIVEGLAQRIINKEVPE 233 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + I SLDI +LLAGTKYRG+FE+RFK +L + +D N+ILFIDE+H ++GAG Sbjct: 234 GLKNSRILSLDIAALLAGTKYRGEFEERFKKVLYAVSKDNNTILFIDELHVMVGAGKTD- 292 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA+N+IKP L+ G++ +G+TT E+S EKD AL RRFQKI I EP+IE T+ I+ Sbjct: 293 GSMDASNMIKPKLARGELHCVGATTLDEYSRYIEKDAALERRFQKIFIIEPNIENTIAIL 352 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK +YE HH+V T A+ AA L+ +YI+DR LPDKAID+IDEA + R+ SK + Sbjct: 353 RGLKERYELHHNVHITDPAIVAAATLSNRYISDRQLPDKAIDLIDEAASSIRIQIDSKPE 412 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 + + + +K + + L+ L L Sbjct: 413 DLDRLDRRIIQLKLECQALKKESDELSKKRLEILSMELSQK 453 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 125/340 (36%), Positives = 210/340 (61%), Gaps = 6/340 (1%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 + V+ +I V+++ IP + ++++ L N+ L LV GQD+A+ ++ AI+ + Sbjct: 530 RNYVSEVEIAEVLSKWTGIPISRILANEKNKLLNMETILHQLVIGQDEAVRVISNAIRRS 589 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLI 534 R+GL +P+GSF+F GPTGVGKTE+ LS+ L ++R DMSE+ME+H+VS+L+ Sbjct: 590 RSGLSDPKRPIGSFMFLGPTGVGKTELCKALSQFLFDTDNAMVRIDMSEFMEKHSVSKLL 649 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGY+G++ G LT+++ + P++++LLDEIEKAH DVFNILLQV+D+G LTDN GR Sbjct: 650 GAPPGYIGYESGAYLTESIRRRPYSIVLLDEIEKAHLDVFNILLQVLDDGRLTDNQGRMV 709 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 DF N V++MT+N G ++K + + + + F PEF NR+D I+ F LS Sbjct: 710 DFNNTVIIMTSNLGSDLIQKKFDISDYDTMKKTVLNVVNQYFRPEFINRIDEIVVFHPLS 769 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLE-VSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + + + L +L+++G ++ +A +L++ G+D GARP+ R+IQ ++ Sbjct: 770 IKHLIDIANIQLKYLYSRLEERGYPRTGITNKALLFLSKIGFDPIYGARPLKRIIQQYIE 829 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHK 753 PL+ ++L L+ G +T+ + + + + + K Sbjct: 830 NPLSQKILSDDLLPGRSITIDV--QNDNIVFIQNDVIDDK 867 >UniRef50_UPI00016C3DF6 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DF6 Length = 1134 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 174/700 (24%), Positives = 287/700 (41%), Gaps = 65/700 (9%) Query: 63 EQTTPVLPASEEERDTQPT------LSFQRVLQRAVFHVQSSGRNEVTG--ANVLVAIFS 114 +Q+ P+ + P+ + RVL+ + + N V + L A+ Sbjct: 102 DQSASDSPSDPDGAPFGPSAPQFKGYTLARVLELGIEVIADPADNLVRLLQKDTLAALRR 161 Query: 115 EQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTT 174 S L V SH PT D + +++Q G ++ T Sbjct: 162 LNLSV--NLKSVAGVQTTLGFAVESHALAVRIPTLK-DRAIRAETDQQDGKLTLLQQIAT 218 Query: 175 NLNQLARVGGIDPLIGREKE--------LERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 L+GR+ E + + L + LL+G SGVGKTA Sbjct: 219 -------------LLGRDDEKTYEADETVSELTRALTGNPTQSVLLIGPSGVGKTAAVRE 265 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDE 286 L A ++ ++AG G +++R + L+K + I F Sbjct: 266 L------ARRWRASARAPVFQTSGARVVAGQTGFGMWQERCQDLIKDATKRKAVIHF-GP 318 Query: 287 IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 + ++ G + A ++P + G++ + T ++ I + D L F+ I + Sbjct: 319 LVELLEVGKSEHNSSGLATFLRPAIGRGELLCVAECTPEQLPLIEKLDPQLLDAFRHITV 378 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYT-AKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 EP + I+ + + R T A+ A L +Y P + + ++ Sbjct: 379 EEPGTAKGRAIL----ASFARDNARRVTEPAALAATDRLHRRYATYSAYPGRPLRFLENL 434 Query: 406 GARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDK 465 + + + ++ R +P + S L D V GQ Sbjct: 435 IR------DGAKGEPITETEVYDAFTRETGLPRAVLDPSVPLDLAATHDWFARRVIGQPD 488 Query: 466 AIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMS 522 A+ +T+ + +AGL ++P+ S LF GPTGVGKTE+ +++ L L RFDMS Sbjct: 489 AVSLVTDLLATVKAGLTRPNRPIASLLFIGPTGVGKTEMAKAVAEFLFGSKDRLTRFDMS 548 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 EY + +V RL+G G GLLT V + P AVLLLDE+EKA F++LLQ + Sbjct: 549 EYADPVSVRRLVGGAFG-----SEGLLTARVREQPFAVLLLDEVEKADHSFFDLLLQALG 603 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH-----QDNSTDAMEEIKKIFT 637 LTD GR ADFRN V+++T+N G R S G + ++ +++ Sbjct: 604 EARLTDAGGRLADFRNTVVILTSNLGADSFRRGSSGFLTGAVGKTESQEHFARAVEQFLR 663 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGY 695 PE NRLD I+ F L +VI + D+ ++Q + + + +SL + LA GY Sbjct: 664 PEMFNRLDRIVPFAPLGPEVIRGITDREWHKVQGRDGVRFRDLSLATDPALLDHLAAVGY 723 Query: 696 DRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 D GARP+ R ++ L PLA ++ + V V + Sbjct: 724 DPRYGARPLKRAMERELLAPLARQMNRHAGNVPLAVEVGV 763 >UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0EI70_ENTDI Length = 840 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 141/398 (35%), Positives = 236/398 (59%), Gaps = 19/398 (4%) Query: 14 FARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPA 71 A E ++ ++ H++ A++ S +E D+ L++E++ + + P Sbjct: 18 QEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKLKKEIKETMNKVPVQNP- 76 Query: 72 SEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSR 131 D + Q+VL+RA+ + G + + +++++ E+E + ++ ++ Sbjct: 77 --PPVDIGLHPTTQQVLRRAIEKQKIMGDSYLAIDVIVMSLMEEKE--ISTIVGNSGINV 132 Query: 132 LDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGR 191 + I+ + G ++E E ++ + +L A G +DP+IGR Sbjct: 133 KEFNKKITEMRK----------GQSVETKEAESQYEALKKYGNDLTAQAESGKMDPIIGR 182 Query: 192 EKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 251 ++E++R I++L RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVP + C + LD+G Sbjct: 183 DEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLQ-CRVIGLDMG 241 Query: 252 SLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGAASGGQVDAANLIKPL 310 +L+AG +YRG FE+R KA++K++++ ILFIDEIHT++GAGA G +DAAN++KP+ Sbjct: 242 ALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANILKPM 301 Query: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD 370 LS G++R IG+TT +E+ EKD A RRFQ++ + EPS E+T+ I+ G++ KYE H+ Sbjct: 302 LSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEEDTLYILRGIREKYENHYG 361 Query: 371 VRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 + T A+ +A L+ +YIN R LPDKAID+ + R Sbjct: 362 LTITDSALVSAATLSKRYINGRFLPDKAIDLRNTIKCR 399 Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats. Identities = 139/392 (35%), Positives = 223/392 (56%), Gaps = 15/392 (3%) Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + L K EA + K + A +L I + K + + + + Sbjct: 452 MKELATKIEAMKHKAESTKDLEVAADLKYYAIPEAEKRMKEL--------KEQNKETTMI 503 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 V IE VV+R IP ++Q+++ L L + L V GQ++A+ A+++AI + Sbjct: 504 SLQVTPTQIEEVVSRWTGIPVTKMNQTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIRS 563 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 R GLG+E +P GSF+F GP+GVGKTE+ L+ L + ++R DMSEYME H+VSRLI Sbjct: 564 RGGLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLI 623 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++GG LT+A+ + P++V+L DEIEKAHP VFN+LLQ++D G LTD GR Sbjct: 624 GAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTV 683 Query: 595 DFRNVVLVMTTNAGVRETER--KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDH 652 DF+N +++MT+N G + + G + + ME +KK F PEF NRLD+I F Sbjct: 684 DFKNTIVIMTSNLGSEIIMKGVEREGQVSRKVKETVMEIVKKTFKPEFLNRLDDITVFSP 743 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKG--VSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 LS + ++V + E+ + ++ +E+++ A + + GY A GARPM R I+ Sbjct: 744 LSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIEK 803 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 + + ++ G + + ++ + + +K ++ Sbjct: 804 TVVTSITKSIISGMMKEKNKIQIDYENDKIQV 835 >UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI Length = 905 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 157/487 (32%), Positives = 260/487 (53%), Gaps = 19/487 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN-PSAREALEACSVDLVALRQELEA 60 ++ ++ + A+ ++++ + VEHL++ALL +A + L ++ L Q+++A Sbjct: 9 FTEQAWDAIVKSQDVAKRYQNQQLEVEHLIIALLEQQGTANKILSRSGIEPEKLLQQVDA 68 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQE--- 117 F+ + P + L A + + + L+A ++ Sbjct: 69 FVRRQ----PKVGSIEHLYLGQGLETFLDLADQAKEKWEDKFIAVEHFLLAFHEDKRLGN 124 Query: 118 ---SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTT 174 L + ++ S+ + + + + Sbjct: 125 KLIGGGTPQLPTRPGFAPPQTTLQIEFKELEATIKAFRGSSKVEDQNPEATYDALAKYGR 184 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +L +LA+VG +DP+IGR++E+ R + L RR KNNP+L+GE GVGKTAIAEGLA RIV G Sbjct: 185 DLTELAKVGKLDPVIGRDEEVRRVVSCLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNG 244 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHT--II 291 DVPE + + + SLD+GSL+AG K+RG+FE+R +++L+++ D +LFIDE+HT Sbjct: 245 DVPESLKERQLISLDMGSLIAGAKFRGEFEERLRSVLREVTHSDGQIVLFIDELHTVVGA 304 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 G+G + VDA NL+KP+L+ G++R IG+TT E+ EKD AL RRFQK+++ +PS+ Sbjct: 305 GSGGGNSSGVDAGNLLKPMLARGELRCIGATTIDEYRKHIEKDAALERRFQKVEVGQPSV 364 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 E+T+ I+ GLK +YE HH V+ T A+ AA L+ +YI+DR LPDKAID++DEA A+ ++ Sbjct: 365 EDTISILRGLKDRYETHHGVKITDAALVAAATLSNRYISDRFLPDKAIDLVDEAAAQLKM 424 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 SK + + + E +S ++++ N L V A+E +T Sbjct: 425 EITSKPVELEAIDRRIMQLEMEKLSIEGELSGTNKEK--NSEAILSTKV---SPALERIT 479 Query: 472 EAIKMAR 478 I + Sbjct: 480 NEINSLK 486 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 141/348 (40%), Positives = 208/348 (59%), Gaps = 6/348 (1%) Query: 408 RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 + + ++ V DI ++VA+ IP + +S+R L L L V GQ +A+ Sbjct: 556 KVQAQGSFLLREQVTDGDIATIVAKWTGIPVNRLLESERQKLLQLEKHLHQRVIGQSEAV 615 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEY 524 A+ AI+ ARAG+ +P+GSF+F GPTGVGKTE+ L+ L L+R DMSEY Sbjct: 616 AAVAAAIRRARAGMKDPGRPIGSFMFLGPTGVGKTELARALAGFLFDRDDALVRVDMSEY 675 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 ME+H V+RL+GAPPGYVG+DQGG L++AV +HP++++L DE+EKAHPDVFNILLQV+D+G Sbjct: 676 MEKHAVARLVGAPPGYVGYDQGGQLSEAVRRHPYSLVLFDEVEKAHPDVFNILLQVLDDG 735 Query: 585 TLTDNNGRKADFRNVVLVMTTNAGVRETER-KSIGLIHQDNSTDAMEEIKKIFTPEFRNR 643 +TD+ GR DF N V+VMT+N G +++ M ++K F PEF NR Sbjct: 736 RITDSQGRVIDFSNTVIVMTSNIGSEYILDVAGDDSKYEEMYKRVMGALRKHFRPEFLNR 795 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 +D II F L + Q+V+ + ++ L ++ +SL+++ + + E GYD GARP Sbjct: 796 VDEIILFHTLRKSELRQIVEIQVKRIERLLGEQKISLQLTDATLDHITEVGYDPVYGARP 855 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 + R IQ L+ PLAN++L V G V + + L + + K Sbjct: 856 LKRAIQRELENPLANQILENRFVCGDVVIIDFV--DSGLVFKKKEEGK 901 >UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERL7_AMOA5 Length = 573 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 160/477 (33%), Positives = 263/477 (55%), Gaps = 20/477 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L + + + ++ A + + H+LL +L S A + L A + + LR LE Sbjct: 5 LTHKAKEIIALSRKEALKLHSNSIRPLHILLGILQYESCLAYKILFALGIPMEELRIALE 64 Query: 60 -AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + ++ + + + + T + +L+ + ++ + ++L+A + Sbjct: 65 KSEQQEHEEDMIDNGQVNGIKLTHEIESLLKLTQQYAKALKSEAIGTEHILLAALKNADV 124 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRK-----DEPTQSSDPGSQPNSEEQAGGEER----- 168 Y+L + V+ + I H + E +S D S+ + + + Sbjct: 125 HTKYILDQFNVTYEAIERVIVHRLGQYYIVAQEMEESRDDASENMDDSEDSTTSKHKDIE 184 Query: 169 ------MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTA 222 ++NF+ +L++LA G +DP+IGR+KE+ER Q+L RRRKNN LL+GE GVGKTA Sbjct: 185 KTRTPILDNFSRDLSKLAEEGKLDPIIGRKKEIERVAQILSRRRKNNALLIGEPGVGKTA 244 Query: 223 IAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL 282 IAEGLA +I+QG V + + + SLD+ +L+AGTKYRG FE+R KA++ +L + IL Sbjct: 245 IAEGLALQIMQGKVAKPLLGKRVVSLDVAALVAGTKYRGQFEERIKAIMNELVKSKQVIL 304 Query: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342 FIDE+HTI+GAG+A+ G +DAAN++KP L+ G I+ IG+TT E+ EKD AL RRFQ Sbjct: 305 FIDELHTIVGAGSAA-GSLDAANILKPALARGDIQCIGATTLSEYRQYIEKDGALTRRFQ 363 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI 402 + + +I E+++I+N LK YE +H V YT + ++A V+LA +YI++R LPDKAIDV+ Sbjct: 364 SVRVEPTTIVESIEILNNLKDTYEEYHSVTYTPEVIKACVDLADRYISNRLLPDKAIDVM 423 Query: 403 DEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 DE GA + + K +AD ++ ++ + L++ +L Sbjct: 424 DEVGASVHMHNIQVPSKIAKLADNIELIKANKNKAVRNQKYEEAAQLRDQEKKLYEK 480 >UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Bermanella marisrubri RepID=Q1N528_9GAMM Length = 859 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 159/492 (32%), Positives = 249/492 (50%), Gaps = 38/492 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSV-DLVALRQEL 58 L L++SL A A H + + +EH +++L++P E ++ C V +L LR++L Sbjct: 13 LTPTLKMSLEEAAQLAMTHGNFNVEIEHWFISMLNHPHTDFLELIKKCQVIELDNLREDL 72 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQE 117 A ++ S R + L A + ++T A++ +A Sbjct: 73 AASLQYFE-----SGNTRAPAFSRHLMECLNEAWLLASVDQDKEQITSAHIFIAAMKNS- 126 Query: 118 SQAAYL------LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN 171 A + L V+ L+ ++ G + +S S++ + Sbjct: 127 GIAHQIRSIVPSLDGVNVADLEALSHTIIGKTSESAIESPQSSESTQSKQGNTQANYLSK 186 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 + +L A G IDP+IGR+ E+ + + VL RRR+NNP+L GE GVGKTA+ EGLA RI Sbjct: 187 YAVDLTAKAEAGEIDPVIGRDDEVRQLVDVLLRRRQNNPILTGEPGVGKTAVVEGLANRI 246 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTI 290 V DVP+ + + SLD+ SL AG +G+FEKR KA++++++ T I+FIDE HTI Sbjct: 247 VANDVPQPLQGIRLLSLDMASLQAGASVKGEFEKRLKAVIEEVKTATVPIIVFIDEAHTI 306 Query: 291 IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 350 IGAG A G DAANL+KP L+ G+ R I +TT+ E+ FEKD AL RRFQ + + EPS Sbjct: 307 IGAGGAEGTG-DAANLLKPALARGEFRTIAATTWSEYKKYFEKDPALTRRFQVVKVEEPS 365 Query: 351 IEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR 410 IE + ++ L E HH+V +A+ A+V+LA +YI R LPDK++ ++D A AR Sbjct: 366 IESAIDMMRSLASTLEQHHNVTILDEAIEASVKLAARYIPARQLPDKSVSLLDTACARVA 425 Query: 411 -----------------LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLG 453 + + + I S + EK + +++ + L L Sbjct: 426 LSQGATPSAIEIEQRRIEQSQTNLRLLQKESHINSQLDEKIEFYEKQIREAESE-LVALE 484 Query: 454 DRLKML--VFGQ 463 D+L+ + GQ Sbjct: 485 DQLEKEQAIIGQ 496 Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats. Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 22/407 (5%) Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 +KI+ E I E + L+ + E + I + ++ D Sbjct: 464 EKIEFYEKQIREAESELVALEDQLEKEQAII--------------GQIKEAREKGESQDE 509 Query: 402 IDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF 461 + + + V+ + +++ IP ++ Q + + L +L D LK V Sbjct: 510 LADQLKAIQG-ESPLVFLDVDKQAVAAIIESWTGIPVGNMMQDEINGLLSLEDELKKRVV 568 Query: 462 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLR 518 GQD A++ + +A++++R+GL KPVG F+ AG +G GKTE + L++ L L+ Sbjct: 569 GQDHAMQKIAQAVRISRSGLTDPRKPVGVFMMAGTSGTGKTETALALAEHLYGGEDNLIT 628 Query: 519 FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL 578 +MSE+ E H VS L+GA GYVG+ QGG+LT+AV K P++V+LLDE+EKAHP + ++ Sbjct: 629 INMSEFKEEHKVSMLLGASAGYVGYGQGGVLTEAVRKKPYSVVLLDEMEKAHPGIQDVFY 688 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER--KSIGLIHQDNSTDAMEEIKKIF 636 + D GT+ D G DF+N +++MTTNA + + + D E+ + F Sbjct: 689 NLFDKGTIKDGEGNDIDFKNTLIIMTTNAATHGISKYFGETDINEEALLEDIRPELLEDF 748 Query: 637 TPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGY 695 P F R + +F LS DV+ ++++ +++ +L+++ SL+ L K Sbjct: 749 RPAFLGRCTIVPYF-PLSEDVLQKIIEINFNKIKKRLNEQYNASLKYDASILEHLLSKCK 807 Query: 696 DRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 D GAR + VI ++ ++N L ++ L E Sbjct: 808 DPDTGARNVENVINKSILPAISNACLEALAKGQSIESIDLKIESESF 854 >UniRef50_UPI00016C3DF8 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DF8 Length = 791 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 163/661 (24%), Positives = 260/661 (39%), Gaps = 70/661 (10%) Query: 125 RKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGG 184 + ++ +V ++ + P P + + A G Sbjct: 135 KLEGLTPEEVGAYLPPVEAELLELVVPVPKEPPGGPLTVPPPPTLAKVAEPVGDRAVRKG 194 Query: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI-------AEGLAW----RIVQ 233 GRE +L ++ L K N LL+GE+GVGKT + AE A R Sbjct: 195 YARAWGREADLAALVRKL-HHEKANVLLLGEAGVGKTTLMVDAVREAEKKALADTNRSRD 253 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 D P + G ++AG +Y G +E+R ++L+ +L + N +L + + ++ Sbjct: 254 ADEPRPQKRK-FWLTSAGRIVAGMRYLGQWEERVESLIAEL-GEINGVLCAERLLELVRT 311 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G AA + P L+ G++R+I T E L FQ + + Sbjct: 312 GGLGPTDSIAA-FLVPYLARGELRMIAEVTPAELDACHRLMPGLPDLFQIVRVEPFDRAT 370 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 + +I+ + V V L +++ P A + Sbjct: 371 ALSVIDRQLDASASGPGVEVERGTGERIVRLFRRFMPYAAFPGPASGFARQLV----DEH 426 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 V KK V + R +PE + ++ + V Q +A EA T Sbjct: 427 VRDGKKPVTPTAVVDRFRRQTGLPELFLRDEITLQRDDVRSWFRARVIDQPEACEAATNV 486 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI------------------- 514 + +AGL ++P LF GPTGVGKT + L+ Sbjct: 487 VMTVKAGLNDPNRPPAVMLFCGPTGVGKTHMAQALADYFFGHGGSNSERGIRNAELQQEN 546 Query: 515 ----------------------ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 L+R DMSEY V RL+G P G + G L Sbjct: 547 QRSSGTASPHSESRIPHSARDRRLIRLDMSEYGGFDAVYRLLGPPRG-----EPGELVKR 601 Query: 553 VIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET 612 V + P +VLLLDEIEKA DVF+ L+ V D G LTD GR +FR+ +++MT+N G Sbjct: 602 VRQQPFSVLLLDEIEKAAADVFDTLMGVFDEGRLTDQYGRVTNFRSTIIIMTSNLGA--G 659 Query: 613 ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ 672 + +++G D+ + K F PEF NR+D ++ F L + + + + + + Sbjct: 660 QSRAVGFG-ADSGVRYQDAAMKFFRPEFFNRMDAVVTFRSLLPASVRAITRRELESIAAR 718 Query: 673 --LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ 730 L + G ++ S+ LAE G+D GARP+ R I+ + PLA LL + DG Sbjct: 719 EGLVRSGAAVRWSERLVERLAEVGFDPRYGARPLQRAIEREVVAPLARWLLANPITDGKV 778 Query: 731 V 731 + Sbjct: 779 I 779 >UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKR5_FIBSS Length = 855 Score = 384 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 163/484 (33%), Positives = 263/484 (54%), Gaps = 25/484 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 + E L A + H ++ HL + L+ P A ++ ++ V LR LE Sbjct: 4 FTNDAEKVLAKAQSLRDRCSHSYLGAAHLAVGLVEGPDATLKKLYKSKGVKPNELRGRLE 63 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 F+++ + + D +P R+L+ AV + R VT ++LVA+ + Sbjct: 64 PFVQKIPRMEGVN---PDVEPDSDLNRILRAAVQAARQVSR-MVTPGDLLVALMKFSGDR 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + + + +VV T SDP + + E+ + ++ + L ++ Sbjct: 120 GLAKVFEDALGSTEVVE-----------TWLSDPFAGAANAEE---QSPLKLYGRELVEM 165 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G + P+IGRE+E+ R I +L R+ KNNP LVGE GVGKTAI EGLA RI +GDVP+ Sbjct: 166 AADGKLSPVIGREEEIRRVILILSRKTKNNPCLVGEPGVGKTAIVEGLAERIYRGDVPDA 225 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + +++LD+ +L+AG KYRGDFE+R K+++ +E+D N+++FIDE+H I+GAG G Sbjct: 226 LKGKKVFALDLSALMAGAKYRGDFEERLKSVIDAIEEDGNTLMFIDELHNIVGAGKTE-G 284 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D N++KP L+ G++ IG+TT QE+ EKD AL RRFQ + ++EPS +E + I+ Sbjct: 285 SMDLGNMLKPKLARGELHCIGATTTQEYRKYIEKDSALERRFQPVQVSEPSEDEAISILR 344 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+K ++AHH VR A+ AAV+L+ +YI+DR LPDKAID+IDEA + + + + Sbjct: 345 GIKDGFDAHHGVRLHDNALVAAVKLSNRYISDRFLPDKAIDLIDEAASLVKTQMDTVPEA 404 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 + E + + K ++ LK L + L + D A++ + E + RA Sbjct: 405 LDTLQRKELQMKIEEQALSKETDEASVKRLKELREDLAVT----DAAVKQMQERWQDRRA 460 Query: 480 GLGH 483 Sbjct: 461 AFAE 464 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 214/801 (26%), Positives = 354/801 (44%), Gaps = 99/801 (12%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 + +L L A AR+ +T LL+AL+ S L D + + +E ++ Sbjct: 82 DSDLNRILRAAVQAARQV-SRMVTPGDLLVALMKF-SGDRGLAKVFEDALGSTEVVETWL 139 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQS--SGRNEVTGANVLVAIFSEQESQA 120 P A+ E + L + +++ A S GR E +L I S + Sbjct: 140 SD--PFAGAANAEEQSPLKLYGRELVEMAADGKLSPVIGREEEIRRVIL--ILSRKTKNN 195 Query: 121 AYLLRKHEVSRLDVVNFISH---------GTRKDEPTQSSDPGSQPNSEEQAGGEERMEN 171 L+ + V + +V ++ + + ++ + EER+++ Sbjct: 196 PCLVGEPGVGKTAIVEGLAERIYRGDVPDALKGKKVFALDLSALMAGAKYRGDFEERLKS 255 Query: 172 -------------FTTNLNQLARVGG----------IDPLIGR----------EKELERA 198 F L+ + G + P + R +E + Sbjct: 256 VIDAIEEDGNTLMFIDELHNIVGAGKTEGSMDLGNMLKPKLARGELHCIGATTTQEYRKY 315 Query: 199 IQ---VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 255 I+ L RR + P+ V E E A I++G A + L +L+A Sbjct: 316 IEKDSALERRFQ--PVQVSEPS-------EDEAISILRGIKDGFDAHHGV-RLHDNALVA 365 Query: 256 GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGK 315 K + +I IDE +++ Q+D L + Sbjct: 366 AVK-------LSNRYISDRFLPDKAIDLIDEAASLVKT------QMDTVPEALDTLQRKE 412 Query: 316 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL-KPKYEAHHDVRYT 374 ++ +E + E D A +R +++ + V+ + + + A +V+ Sbjct: 413 LQ----MKIEEQALSKETDEASVKRLKELREDLAVTDAAVKQMQERWQDRRAAFAEVQDL 468 Query: 375 AKAVRA----AVELAVKY-------INDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNV 423 KA++A + +Y + + + ++ + A + + V Sbjct: 469 KKALKAAKDEMEQAEARYDLNRAAELKYNKIVNIEKELAQKTEALRKSAEEGGLSEEVTE 528 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 I VV+R IP + + ++ L +L +RL V GQD+A+EA++EAI R+GL Sbjct: 529 ETIALVVSRWTGIPVTKLCEGEKAKLLHLDERLHARVIGQDEAVEAVSEAILRNRSGLSR 588 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGY 540 E+ P+GSFLF GPTGVGKTE+ L+ L L+R DMSEYME+H+VSRLIGAPPGY Sbjct: 589 ENAPIGSFLFLGPTGVGKTELAKALAVELFDSENALVRIDMSEYMEKHSVSRLIGAPPGY 648 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+++GG LT+AV HP+ V+LLDEIEKAHPDVFN LLQV+D+G LTD GR +F+N + Sbjct: 649 VGYEEGGQLTEAVRTHPYCVILLDEIEKAHPDVFNTLLQVLDDGRLTDGKGRTVNFKNTL 708 Query: 601 LVMTTNAGVRETERKSI----GLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 ++MT+N G + + G Q D ++ F PEF NRLD ++ F LS Sbjct: 709 ILMTSNLGAEKFRLSAANAKNGEPPQVALADVEADLHAFFRPEFLNRLDEVLVFQSLSKK 768 Query: 657 VIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPL 716 I ++V +L + ++ + L +S A + +AE Y GARP+ R I+ N+++PL Sbjct: 769 QIREIVKLKFADLANRAARQDLVLTLSDAALDAIAEGAYQPEFGARPIQRYIERNIERPL 828 Query: 717 ANELLFGSLVDGGQVTVALDK 737 ++ +L G++ V Sbjct: 829 SHAILSGTVSAAKPAVVDYKD 849 >UniRef50_UPI0001744446 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744446 Length = 1104 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 183/684 (26%), Positives = 299/684 (43%), Gaps = 45/684 (6%) Query: 87 VLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDE 146 L AV E+ +VL+AI E ++ L + E L++ + Sbjct: 120 ALNIAVIAPDRERLPEMLADHVLLAIKREGFNRDLLELARLERGTLELTRL------QWT 173 Query: 147 PTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDP-LIGREKELERAIQVLCRR 205 P + ++ G E+ + T G P + + ++ + ++L Sbjct: 174 PNLGTAKERWKQRNQEPGKEDALAQLCT-----RMEGIFQPRVFEVQGQVAQLARLLNLE 228 Query: 206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK 265 K + LLVG SGVGKTA+ + LA + C + L+AG G ++ Sbjct: 229 NKPSILLVGPSGVGKTALVQKLA----ADRGEHGLGQCEFHRTSGARLIAGACGFGQWQL 284 Query: 266 RFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQ 325 R + LL + + ++L + + ++ G +S G A+ I+P L +++VI T + Sbjct: 285 RCRELLLRARELG-AVLHLGSLFELLNVGQSSAGNESIASFIRPYLVRREVQVIAECTPE 343 Query: 326 EFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 385 + S + D L F+ + + EP+ E I+ A R+T A+ L Sbjct: 344 QLSVVERIDPRLGDAFRIMKVEEPTPERADAILLAASVAM-AGDRARFTRPALHRVAALH 402 Query: 386 VKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSD 445 +++ P + + RL S V A++ + +P + + + Sbjct: 403 RRFMGYAAFPGAPLRFMR------RLHEKSATDILVEEAEVYDAFTKETGMPRRLLDPAL 456 Query: 446 RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVT 505 L + V GQ A+ A+ I +AGL +P+ S LF GPTG GKTE+ Sbjct: 457 PLDLDAARQWFEERVQGQPDAVAAVVAMIARLKAGLTRPGRPLMSLLFTGPTGTGKTEMA 516 Query: 506 VQLSKALG---IELLRFDMSEYMERHTVSRLI-GAPPGYVGFDQGGLLTDAVIKHPHAVL 561 L++ L ++R DMSEY + RL+ G+ G + GLLT AV P VL Sbjct: 517 KALAEFLFQAADRMIRLDMSEYNHPWSAQRLVSGSQDG-----REGLLTAAVRDQPFNVL 571 Query: 562 LLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH 621 LLDE EKA P VF++LLQV+ LTD GR ADF N V++MT+N G RE R +G Sbjct: 572 LLDEFEKADPAVFDLLLQVLGEARLTDAAGRTADFSNCVVIMTSNLGAREFARGRLGFQQ 631 Query: 622 QDNS-----TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LD 674 + ++ + PE NR+D+I+ + LS +V+ + + + + + L Sbjct: 632 DGETWRNAVEHFTAAVQAVLRPEMFNRIDSIVPYRPLSEEVVESLTRRELAAIAQRPGLA 691 Query: 675 QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 + + LEV++ LA +GYD GARP+ R I L PL+ EL +L V Sbjct: 692 GRKLRLEVAEPLIQHLAREGYDPRYGARPLKRRIAQELLAPLSAELPV-TLAPKSLVKAE 750 Query: 735 LDKEKNELTYGFQSAQKHKAEAAH 758 L + ++ + F K +A H Sbjct: 751 LGADG-KVKFQFT---KPLQQAEH 770 >UniRef50_UPI0001746BB9 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746BB9 Length = 767 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 143/548 (26%), Positives = 252/548 (45%), Gaps = 27/548 (4%) Query: 191 REKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ--GDVPEVMADCTIYSL 248 RE ++ R +Q K + LLVG G GKTA+ A ++ + G P + Sbjct: 210 READVAR-VQARLDLSKGSTLLVGGPGSGKTAVLVDAARKVERELGLGPGEARSQRFWIS 268 Query: 249 DIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIK 308 L+AG ++ G ++++ + ++ +L + +L ++ + ++ G +S G AA + Sbjct: 269 SGSRLIAGQRWLGQWQEQLEKVIAELRA-LDGVLCLESLQELLRLGGSSPGSSLAA-FLV 326 Query: 309 PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH 368 P L +G++RV+ T +E + + A + + + +I++ + Sbjct: 327 PYLQTGELRVVVEATPEEVESCERELPAFLDALGVVRMEPLDEAQQARILDQAARSFSDQ 386 Query: 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIES 428 + +TA A R A L ++ P + + EA RAR V++ + Sbjct: 387 TQLDFTADAAREAGRLCRRFQPYAGFPGTPLGFMHEALNRAREAAA----PAVDLTHMRG 442 Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 + A +P+ + + L V Q +A++++ + +AGL +P+ Sbjct: 443 LFATTTGLPDWLLDEKATLDAAALAQWFNERVVAQPRAVQSVCRPLTKFKAGLNDPLRPL 502 Query: 489 GSFLFAGPTGVGKTEVTVQLSKAL------GIELLRFDMSEYMERHTVSRLIGAPPGYVG 542 LF GPTG GKT++ L L ++R DMSEY RL+G G Sbjct: 503 AVLLFTGPTGTGKTQLAKTLGDYLYPNRKAADRMVRLDMSEYAGYDAARRLLGEAGG--- 559 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + + ++P VLLLDE+EKA P+VF+ L+ V D G LTD GR FR+ V++ Sbjct: 560 --EPSDFIKRMRQNPFTVLLLDEVEKASPEVFDTLMNVFDEGRLTDTLGRTTWFRSTVII 617 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAM---EEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 MT+N G R + S+G D A + F PEF NRLD ++ FD L D + Sbjct: 618 MTSNLGAR--KGGSLGFTPGDAGASARVDPAAAAQFFRPEFFNRLDEVVVFDPLDRDAVK 675 Query: 660 QVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 + + + L+ + L + + L+VS + + E+G+D GARP+ R +++ + P+A Sbjct: 676 AIALREVASLEEREGLRDRDIKLQVSPTLLDKVCEQGFDPIYGARPLQRRLEELVVTPVA 735 Query: 718 NELLFGSL 725 L+ + Sbjct: 736 RWLVAHPV 743 >UniRef50_A9AVM3 ATPase AAA-2 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AVM3_HERA2 Length = 1027 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 158/612 (25%), Positives = 294/612 (48%), Gaps = 19/612 (3%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 G Q E + T +L A + P R+++L Q+L NP+++ Sbjct: 55 GEQRIMVEDEELANLLSRCTIDLRARAERDELRPAFLRDEDLLAVQQLLTSMDHVNPIIL 114 Query: 214 GESGVGKTAIAEGLAWRIVQ--GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALL 271 G++ GKTA+ L R+V+ ++PE + D +Y + SLLAG ++ + L Sbjct: 115 GKARSGKTALVHELVRRLVKTPENMPEKLRDLPMYEMTPASLLAGLQFGEGWRANLSTLF 174 Query: 272 KQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLI--KPLLSSGKIRVIGSTTYQEFSN 329 +L + +LFI +IH +GAG G D + L +GK+++I + Sbjct: 175 GKLAEHGAVLLFIRDIHAAVGAGVKRGDDDDDDLAAALESNLHNGKLKIIAEARPDRWQA 234 Query: 330 IFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYI 389 I + A F I + P E+ +I+ + ++ ++ T++A A+++A ++I Sbjct: 235 IAADRESFADLFTSIQLAIPKPEQVAEIVQHVAERHRQRANIEATSQA--TAIDIAGRFI 292 Query: 390 NDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTL 449 ++ P KAI++++++ A + + V + + + + +++R Sbjct: 293 LNQAFPGKAIELLEDSLLLAER----QHEPEVLPRHVVECFGNRTGLTKLLLDENERFDE 348 Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 L V GQD ++ A+ + + + +A L +P+G + F GPTGVGKTE+ L+ Sbjct: 349 IALRRSFSERVLGQDPSVIAMVQKLALLKARLHDPARPMGVYFFLGPTGVGKTELAKTLA 408 Query: 510 KALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI 566 L +RF+M++Y + ++L G G ++ G LT A+I P AVLLLDE Sbjct: 409 STLFGSEERFVRFNMADYSGEYDFAQLFGRTWGDSDAERRGKLTMALINLPFAVLLLDEF 468 Query: 567 EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN-- 624 EKAH +FN LQ+ D G L + G + + RN +++MT+N G + ++ G ++ Sbjct: 469 EKAHRSIFNRFLQLFDEGILVNAMGEEINLRNTIIIMTSNFGATIVQGETWGFAAREGIE 528 Query: 625 --STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSL 680 + E ++ F+PEF NRLD +I+F LS + ++ + + +L + L ++ V + Sbjct: 529 AVERRVLRETEEFFSPEFINRLDGVIFFKPLSQSDMRKIAAREMRKLFEREGLVRRNVQV 588 Query: 681 EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 E+ + L + GY GAR + R I+ + PLA+ LL G + + + +E+ Sbjct: 589 ELDDAVLDILLKHGYSIRYGARYLKRQIEKMVTYPLASALLTRPEQTNGLLRLYVAREQI 648 Query: 741 ELTYGFQSAQKH 752 + ++ + Sbjct: 649 KASWVANDDDEP 660 >UniRef50_Q2SB13 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SB13_HAHCH Length = 754 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 152/569 (26%), Positives = 254/569 (44%), Gaps = 36/569 (6%) Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI----AEGLAWRIVQGDVPEVMADC 243 R + ++R + L +++ LL+GE GVGK+ + A G+ P Sbjct: 205 AWERGEMIQRLAEELL-EGRSSCLLIGEQGVGKSVLWQEPVRVAARLSKSGEAP-----L 258 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 T + ++A KY G++++ +++ L Q N +L++++ +++ G G + Sbjct: 259 TFWRSTPQRIIAKAKYLGEWQEVCDEVVESLAQ-VNGVLWLNDFISLLSIGG-EGQEDSM 316 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP 363 A ++ L+ G+IR+IG QE K F++I++TE S +++ Sbjct: 317 AAYLRSYLAKGQIRIIGELRPQELEAARNKLPGFLHLFEQINVTELSGRSAQRVVQAYAN 376 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNV 423 ++ + A+ +L +YI P + A +++ T+ Sbjct: 377 YAASNFAIDTRDDALETVSQLVRRYIKYERAPGNLVRFYHHCVKNA----FEQKQATITR 432 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 + + +PE + + + L D K + GQD +E L I++ +AGL Sbjct: 433 DQVIADFVAYTGLPELFLRDEQALSQQALLDYFKTRIIGQDSILEQLCRVIQIFKAGLND 492 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALGI------ELLRFDMSEYMERHTVSRLIGAP 537 KP+ + LFAGPTGVGKT T L+ L R DMSE+ + RLIG Sbjct: 493 PQKPIATLLFAGPTGVGKTAATKALADYFFSAGQSKNPLFRLDMSEFQHPGHIERLIG-- 550 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 G + L V +P +V+LLDEIEKA VF+ LL +D G LTD GR DFR Sbjct: 551 ----GEGKPSPLVQHVRANPFSVVLLDEIEKADDSVFDALLSTLDEGLLTDRFGRTTDFR 606 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDA-MEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 N +++MTTN GV +G + M I+ F PEF NR+D I+ F+ L D Sbjct: 607 NTIIIMTTNLGVNT--GGGVGFSATEKRGQVSMSGIRDFFRPEFINRIDAILCFNPLDRD 664 Query: 657 VIHQVVDKFIVEL--QVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 I + + + L + ++ ++ + L S +AE G+ GARP+ R I+ + Sbjct: 665 SILSIARRELELLNQRERIREQKLKLSFSDALVAHVAEAGFSELYGARPIQRAIEQRVVA 724 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNELT 743 LA+ L+ + LD + Sbjct: 725 ELASYLVTREHTPS---HIHLDAIDGAVV 750 >UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q6N1_MALGO Length = 853 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 214/845 (25%), Positives = 362/845 (42%), Gaps = 129/845 (15%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS----------------AREALE 45 + SL AF A+++ H + H+ LALL++ + + E Sbjct: 6 FTDRAQNSLAAAFQLAKDYAHAQLAPSHIALALLNDDTSNSTGVQSTNKDSQSLFKSICE 65 Query: 46 ACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTG 105 V + L +L A + + PA + D T + ++++ A + + Sbjct: 66 KTGVSVPDLENKLRAALRKIPQQSPAPD---DVSLTGAASKIMKNAQQYKTQQRDAFIAQ 122 Query: 106 ANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG 165 +VL+A+ ++S +L++ ++ D++ R G +S+ G Sbjct: 123 DHVLLALL--EDSSINNMLKEAGLANPDLMKNAITQARG---------GRHIDSKTAEAG 171 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 + M + T+L LA G +DP+IGR+ E+ R ++VL RR KNN +L+G GVGKTA+ E Sbjct: 172 YDAMGKYCTDLTALAAEGKLDPVIGRDNEIRRVVRVLSRRTKNNAVLIGSPGVGKTAVVE 231 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN----SI 281 GLA R++ DVP + IYSLD+G L+AG KY+G++E+R KA+L +E+ TN I Sbjct: 232 GLAQRVIDRDVPPNLLGK-IYSLDMGGLMAGAKYKGEYEERVKAVLSDIEKMTNDGTPCI 290 Query: 282 LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 LFIDE+H ++ AG +DAANL+KP+L+ GK+R IG+TT E+ EKD AL RRF Sbjct: 291 LFIDEMH-LMMAGKGGDTGMDAANLLKPMLARGKLRCIGATTLNEYRQSIEKDAALERRF 349 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 Q++ + EP++E+T+ I+ GL+ KYE HH VR AV +A +LA +Y+ R LPD AID+ Sbjct: 350 QQVIVEEPTVEDTIAILRGLREKYEVHHGVRILDAAVVSAAQLAKRYLTARKLPDSAIDL 409 Query: 402 IDEAGARARLMPVSKRKKTVNVA------DIESVVARIARIPEKS-VSQSDRDTLKNLGD 454 +DE+ A + + + + I + P+ + R L +L D Sbjct: 410 VDESCADVTVSRETVPEAIDTLERRKVRLQIAMTALEREKDPQSKERLEETRQELAHLDD 469 Query: 455 RL--------KMLVFGQDKAIEALTEAIKMARAGLGHEHKP------VGSFLFAGPTGVG 500 L G + + + I+ RA + +A P Sbjct: 470 ELAPMKAEFEAQRAKGDE--LNNVRRKIEELRAKASDAERRYDLETASDLMYYAIPDLEK 527 Query: 501 KTEVTVQLSKALGIELLRFDMSEYMERH--TVSRLIGA-----PPGYVGFDQGGLLTDAV 553 + E + ++ E + + +++R I + P G L + Sbjct: 528 RAEQLQEQARKDEAEGKTSQANTVTSENIASINRPIASFLFCGPSGTGKTLMSKTLASYM 587 Query: 554 IKHPHAVLLLDEIEKAHPDVFNILLQV------MDNGTLTDNNGRKADFRNVVLVMTTNA 607 P A++ +D E + + L+ D G + R+ F +VL+ Sbjct: 588 FDDPDAMVRIDASEYSEKHSISRLIGAPPGYVGFDEGGVLTEAVRRRPFS-IVLIDEIEK 646 Query: 608 GVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 RE + + ++ + D+ + R II +L + I++ D+ + Sbjct: 647 AAREFVQLFLQVLDEGRLQDSQGRLVSF-------RNTIIIMTSNLGSSFINESEDEDLT 699 Query: 668 ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV-------------------- 707 E QL Q +S E N + R +G + R+ Sbjct: 700 ESVRQLVQGAISAHFPPEFINRIDSIVTFRKLGRVDVRRIVDIRIKELQKRLIENGRQSR 759 Query: 708 ----------------------------IQDNLKKPLANELLFGSLVDGG-QVTVALDKE 738 IQD L PL+ +L G + + ++ ++ DK Sbjct: 760 LVVDEEAKDWLGSIGYSPTMGARPLGRAIQDQLLNPLSMLILRGQIHNDDPEIHISFDKY 819 Query: 739 KNELT 743 +N LT Sbjct: 820 RNALT 824 >UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterobacteriaceae RepID=Q7N4N8_PHOLL Length = 860 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 161/461 (34%), Positives = 249/461 (54%), Gaps = 23/461 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 L E L+ A A H + +EHLLLAL P+ + +D + L Sbjct: 12 LTVEARQCLDEAVNLAVRRTHHEVEIEHLLLALFEKQLPTMEQVCHHGGIDSMTLL---- 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 +++ +L + T + + Q ++ G +++T ++VA+ Sbjct: 68 NACQRSLALLRSGNHRPPVLATNLTEWMEQTWMYASTHWGASQITAQVLIVALIMNPSLH 127 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG---EERMENFTTNL 176 + ++ + T EP + + P G + + +T +L Sbjct: 128 HSL--------TSELQQALQGNTDGIEPWLRTQTNTTPQHITAPVGDNTQSALAQYTHHL 179 Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 Q AR +DP++GRE+E+ + I VL RRR+NNPLL GE+GVGKTA+ EGLA RIV G V Sbjct: 180 TQAARDNKLDPVLGREREIRQLIDVLLRRRQNNPLLTGEAGVGKTALIEGLAQRIVDGRV 239 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGA 295 P+V+A +++LD+G L AG +G+FE R + LL ++++ T ILFIDE HT+IGAG Sbjct: 240 PKVLAQAELFTLDMGLLQAGASVKGEFESRLQKLLDEVKKYPTPVILFIDEAHTLIGAGG 299 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 + GQ DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ I + EPS+E + Sbjct: 300 QA-GQNDAANLLKPALARGELRAIAATTWSEYKKYFEKDAALARRFQLIKVEEPSLELAI 358 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 ++ + P E HH+V+ A+AV AV LA +YI R LPDK++ ++D A AR VS Sbjct: 359 AMLRAITPAMEKHHNVKVLAEAVTEAVTLANRYITGRQLPDKSVSLLDSACARV---AVS 415 Query: 416 KRKKTVNVADIESVVARIARIPEKSVSQSDRDT-LKNLGDR 455 + + + D+ +++A IA E + + +T L+ L R Sbjct: 416 QTDEPAPIEDLRAMLANIAAEQEALLREGGHETQLQKLAQR 456 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 112/342 (32%), Positives = 182/342 (53%), Gaps = 15/342 (4%) Query: 408 RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 R + V+ A + +VA IP + +++RD L+ L RL V GQD A+ Sbjct: 499 HQRHHQHAYVFDCVDAACVADIVAGWTGIPLGRMVENERDVLRQLETRLGQRVMGQDHAL 558 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEY 524 + I++A+ L KP G F+ AGP+GVGKTE + L+ L L+ +MSEY Sbjct: 559 SQIARQIRIAKVQLADPIKPTGVFMLAGPSGVGKTETALALAHELYGGEHHLITINMSEY 618 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 E H+VS L G+PPGYVG+ QGG+LT+AV + P++V+LLDE+EKAHPDV + QV D G Sbjct: 619 QEAHSVSGLKGSPPGYVGYGQGGVLTEAVRRQPYSVVLLDEVEKAHPDVLELFFQVFDKG 678 Query: 585 TLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH----------QDNSTDAMEEIKK 634 + D G++ +FRN ++++TTNA R ++ + +D E+++ Sbjct: 679 MMEDAEGQQINFRNTLIILTTNAASDLVMRAAMHGVKEQGENRPATLEDIQEIIRPELQR 738 Query: 635 IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEK 693 IFTP F RL +I + + +V+H +V + ++ + Q L S +++A+ Sbjct: 739 IFTPAFLGRLQ-VIPYLPVQGEVLHAIVHHKLNKIVTRYRQSTQCELHYSDTLVDFIAKG 797 Query: 694 GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 GAR + ++ + L+++LL G + V + + Sbjct: 798 CQIAESGAREIDNLLTQFVLPLLSDQLLLGGVPVNQDVWMDV 839 >UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi RepID=D2VCN5_NAEGR Length = 891 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 162/463 (34%), Positives = 254/463 (54%), Gaps = 23/463 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL----------EACSVDL 51 + +++ A+ A++ +H F++ H+ A++ NP +++L ++D Sbjct: 6 FTDKTNQTISDAYMMAKDRKHIFISPLHV-AAVIFNPDDKQSLGFLVCKKVSSSQKTIDC 64 Query: 52 VALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVA 111 + EL+ + V D P VLQ A + + +VL+A Sbjct: 65 NKIADELKNAMNTKISVQ--DPPVEDLAPNRRLVSVLQAAEKIKDQLDDHLLAVDHVLLA 122 Query: 112 IFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN 171 + + + A L + V+ R G + +S++ G + + Sbjct: 123 LMDDSDVSNAILKATNNQLTKQVLKDTLALIRG---------GKKVDSKQAETGYDALNR 173 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 + N+ +AR G DPLIGR+KEL R I+VL RR KNN L+ E GVGK+A+ EGLA RI Sbjct: 174 YGVNMVDMARQGKYDPLIGRDKELARMIRVLSRRTKNNCCLLAEPGVGKSALVEGLAMRI 233 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 GDVP+ + +YSLD+GS++AG+K+RG+FE+R K++LK++E+ + ILFIDEIHT+ Sbjct: 234 ATGDVPKNLQ-TQLYSLDLGSMVAGSKFRGEFEERLKSILKEVEESGDVILFIDEIHTLS 292 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 GAG+ +DA+N+IKPLL+ G +R+IG+TT E+ EKD AL RRFQ + + EP++ Sbjct: 293 GAGSTGDNSLDASNMIKPLLARGVLRLIGATTPTEYRKYIEKDAALERRFQPVYLAEPNV 352 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 +ET+ I+ GLK +YEAHH VR A+ A L+ +YI R+ PDK+ID+IDEA A R+ Sbjct: 353 QETISILRGLKSRYEAHHGVRILDSAIVEAARLSARYIQGRYNPDKSIDLIDEASANIRV 412 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD 454 S+ + + + + A EK + SD T + L Sbjct: 413 QLNSRPEIIDTLERKKLQLQVEATALEKEKNYSDEKTKQRLEQ 455 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 148/460 (32%), Positives = 249/460 (54%), Gaps = 32/460 (6%) Query: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH-- 368 L K+++ T E + D +R +++ ++E + +K KYEA Sbjct: 424 LERKKLQLQVEATALEKEKNY-SDEKTKQRLEQVKNEISKVDEE---LKPIKLKYEAETS 479 Query: 369 --HDVRYTAKAVRA----AVELAVKY-------INDRHLPD---------KAIDVIDEAG 406 +++R + + V+ +Y + +P+ K I+ +E Sbjct: 480 LVNELREKNQKLEKLKAKMVDAEARYDLALASDLKYGAIPEIEESIQSLKKKIEQKEEDD 539 Query: 407 ARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKA 466 + + + V I V+AR IP + +++S++D + L +RL V GQ+ A Sbjct: 540 RKNGVNSANMTSDVVTPEQINEVIARWTGIPVQRLNESEKDKVLKLEERLMKRVVGQEDA 599 Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSE 523 I++L+E+I ++AGL + +KP+GSFLF G +GVGKT + ++ L + ++R DMSE Sbjct: 600 IKSLSESIIRSKAGLSNPNKPIGSFLFLGSSGVGKTYLAKSIAYELFDDEKHMVRIDMSE 659 Query: 524 YMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDN 583 ME+H+VSRLIG+P GYVG+ LT+ V + P+ V+L DEIEKAHP V N+LLQ++D+ Sbjct: 660 LMEQHSVSRLIGSPAGYVGYSDDNQLTEPVRRQPYTVVLFDEIEKAHPRVLNVLLQLLDD 719 Query: 584 GTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNR 643 G LTD GR DF+N V++MT+N G + + + M E+++ FTPEF NR Sbjct: 720 GRLTDGQGRTVDFKNTVIIMTSNIGSKHFLTMNDN-NKETVKKQVMNEVRQHFTPEFLNR 778 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 LD+I++F+ L++ + VV + L +L ++ +S+++ A + +G+D GARP Sbjct: 779 LDDILFFEPLTSKHLVNVVRLQMESLTERLKERDISIDIRDSACELVISEGFDPNYGARP 838 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 +AR IQ ++ L+ +L G L DG Q+ + K + T Sbjct: 839 LARFIQKHIVTELSKLMLKGELRDGSQIVIQGVDGKFKFT 878 >UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TDQ5_9BURK Length = 910 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 186/616 (30%), Positives = 287/616 (46%), Gaps = 74/616 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 LN E +L++ A H + VEHLLL LL + P + L +V L +L+ Sbjct: 12 LNPECKLAMEQAAQLCVRQTHYNVDVEHLLLTLLESDAPDLKAILAHFAVKPETLSAQLQ 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS-GRNEVTGANVLVAIFSEQES 118 ++ R + +F + Q A G ++ +++A+ Sbjct: 72 KTVDGF-----KRGNGRTPALSPNFSPLFQEAWLLSSMLLGEQQIRSGTLVLALLEVDTL 126 Query: 119 Q------AAYLLRKHEVSRLDVVNFISHGTRKDEPTQ----------------------S 150 + A LL + D + I G+ +D + Sbjct: 127 RGMLLESAPALLNFPRAALRDRLAAILAGSSEDAGGSHMPGQDSEAAQPGAASASASSAA 186 Query: 151 SDPGSQPNSEEQAGG---EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRK 207 + G+ PN AGG + +E +T ++ LAR G IDP+ GR+ E+ + I VL RRR+ Sbjct: 187 RETGAMPNIAGGAGGSGRKSALELYTVDMTGLAREGKIDPIRGRDAEIRQLIDVLLRRRQ 246 Query: 208 NNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRF 267 NNP+L GE+GVGKTA+ EG A RIVQGDVP + + ++ SLD+ L AG +G+FE R Sbjct: 247 NNPILTGEAGVGKTAVVEGFAQRIVQGDVPPALVNVSVRSLDLALLQAGAGVKGEFENRL 306 Query: 268 KALLKQLEQDT-NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 K+++ +++ ILFIDE H +IGAG + GQ DAANL+KP L+ G++R I +TT+ E Sbjct: 307 KSVIAEVKASPVPVILFIDEAHQLIGAGGSE-GQGDAANLLKPALARGELRTIAATTWAE 365 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + E+D ALARRFQ + + EPS + ++ G+ K E HH V AVR AV+L+ Sbjct: 366 YKKYVERDPALARRFQVVKVEEPSEAVAIDMLRGMVQKLEEHHGVEILDDAVRDAVKLSH 425 Query: 387 KYINDRHLPDKAIDVIDEAGARARL-MPVSKRKKTVNVADIESVVARIARIPEK------ 439 +YI+ R LPDKAI V+D A AR + + + IE+ ++ + + Sbjct: 426 RYISGRQLPDKAISVLDTACARVAIGQSGTPEEIEALGRTIEAAERQLRILRHEAATGAD 485 Query: 440 -----SVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 +V+ D + RL + + +A+E + K R L Sbjct: 486 RADAIAVTTKQLDDARAQRSRLTDKLATEKRAVEEILAWRKKIRGYLSDPDS-------- 537 Query: 495 GPTGVGKTEVTVQLSKALGIELLRFDMSEYM-----ERHTVSRLIGAPPGYVGFDQGGLL 549 G + V LS+ L L E M + TV+++I G+ G G +L Sbjct: 538 AADGEDAASLAVNLSR-LEKGLEAMQNDEPMVPVCVDSETVAQVIS---GWTGIPVGRML 593 Query: 550 TDAVIKHPHAVLLLDE 565 D + H VL L + Sbjct: 594 ADEL----HTVLYLQD 605 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 118/447 (26%), Positives = 200/447 (44%), Gaps = 29/447 (6%) Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII---- 358 A +++ + + + S T +E + A R+ + + + + I Sbjct: 437 AISVLDTACAR--VAIGQSGTPEEIEALGRTIEAAERQLRILRHEAATGADRADAIAVTT 494 Query: 359 ----NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID----------- 403 + + + +AV + K PD A D D Sbjct: 495 KQLDDARAQRSRLTDKLATEKRAVEEILAWRKKIRGYLSDPDSAADGEDAASLAVNLSRL 554 Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 E G A V+ + V++ IP + + T+ L D+L V GQ Sbjct: 555 EKGLEAMQNDEPMVPVCVDSETVAQVISGWTGIPVGRMLADELHTVLYLQDKLAERVVGQ 614 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFD 520 D+A++A+ ++ RA L KPVG FL GP+GVGKTE L+ L ++ + Sbjct: 615 DEALDAIARRVRTFRADLDDPGKPVGVFLLVGPSGVGKTETACALADMLYGGERNMITVN 674 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MSE+ E H+VS L GAPPGYVG+ +GG+LT+AV + P++V+LLDE+EKAHPDV + QV Sbjct: 675 MSEFQEAHSVSGLKGAPPGYVGYGRGGVLTEAVRRRPYSVVLLDEMEKAHPDVLELFFQV 734 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH---QDNSTDAMEEIKKIFT 637 D G + D G DF+N ++++T+NA S G + + + F+ Sbjct: 735 FDKGVMEDGEGVPIDFKNTLILLTSNAAQDVITEASRGGRRPPPDELIEKLRPALLRQFS 794 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQEARNWLAEKGYD 696 P F RL + ++ HL I+ +V+ + L + ++ L + +A++ + Sbjct: 795 PAFLGRLVLVPYY-HLGDAQINAIVNLKLERLAQRFERNHHAGLTWDDDVATLIAQRCKE 853 Query: 697 RAMGARPMARVIQDNLKKPLANELLFG 723 GAR + ++ ++ LA ++L Sbjct: 854 VDSGARNVDHILTQSVLPELARQVLER 880 >UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 RepID=B7VTU3_VIBSL Length = 897 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 150/465 (32%), Positives = 229/465 (49%), Gaps = 15/465 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 L+ ++++L A A A + + +EH LL+LL N L LRQ + Sbjct: 13 LHPIVKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDILLSHFDCSETILRQSIR 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + T + +L + + + + ++ +L+ + S Sbjct: 73 STLNTNT----TGNGSKPVFSSLLIEWLQESWLVSSLDLSETQIRSGALLLTLVSNPLRY 128 Query: 120 AAYLLRK--HEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 + V+ + S T + ++ E + FTT+ Sbjct: 129 GQHGYASILEGVNPDTLKRNFSELTTNSLESLATTSEKTDARE----DGSALSKFTTDFT 184 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 AR G IDP+ R++E+ + I +L RRRKNNP+ VGE GVGKTA+ EGLA +I +GDVP Sbjct: 185 GKARKGEIDPVFCRDQEIRQIIDILARRRKNNPIAVGEPGVGKTAVVEGLALKITEGDVP 244 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAA 296 + + +Y LD+G L AG +G+FEKR A+L +++ T ILFIDE HT++G G Sbjct: 245 DCLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQ 304 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 +GG DAANL+KP L+ G+++ I +TT+ E+ FEKD ALARRFQ + + EPS + Sbjct: 305 AGGS-DAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSASQAAL 363 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 II GL+P YE H+V A+ AA LA +YI R LPDKAIDV+D A AR + + Sbjct: 364 IIRGLRPAYEKSHNVYVRDDAITAAANLADRYITGRQLPDKAIDVLDTACARVNISLNAT 423 Query: 417 RKKTVNVAD-IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 + I + + + + Q+ L LK + Sbjct: 424 PAPVETLHQEIAAANRELEALERDQLQQTGDKHSAALIPELKEKI 468 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 119/382 (31%), Positives = 187/382 (48%), Gaps = 13/382 (3%) Query: 374 TAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 433 A+ + +Y +AI +E R V +I V++ Sbjct: 521 DDDALTSDKPNCHEY--SEEQTREAIQSCNERLDNVRGTN-PLVHYEVGPDEISHVISDW 577 Query: 434 ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLF 493 IP + Q + NL L + GQ+ AI+AL E I+ A+AGLG+ P G FL Sbjct: 578 TGIPMGKMLQDESQATLNLKQNLIQNIKGQEFAIDALAEGIQTAKAGLGNPDAPTGVFLL 637 Query: 494 AGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLT 550 GP+GVGKTE ++ + + +MSE+ E+HTVSRLIG+PPGYVGF +GG+LT Sbjct: 638 VGPSGVGKTETARAIADQMFGGERFMTTINMSEFQEKHTVSRLIGSPPGYVGFGEGGMLT 697 Query: 551 DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR 610 +AV + P++V+LLDE+EKA P+V N+ QV D GTL D GR DF+N +++MT+N Sbjct: 698 EAVRQRPYSVVLLDEVEKADPEVLNLFYQVFDKGTLNDGEGRTIDFKNTLIIMTSNLATH 757 Query: 611 ETER---KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 E E ++ + + + + F P R+ +++ F LS + ++ + Sbjct: 758 EIESLVHQAKDIDANIVAEAIRPTLNQHFKPALLARM-SVLPFLPLSDAAMTDIIHHKLK 816 Query: 668 ELQVQLD-QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLV 726 ++ +L ++L ++ GAR + VI L L+ +LL Sbjct: 817 KVSERLQSHHKLALCYGDNLVEFVLGNCRLAETGARNIDAVINRQLLPQLSTQLLVNDKD 876 Query: 727 DGGQ-VTVALDKEKNELTYGFQ 747 D + V++D E+ LTY F Sbjct: 877 DSHTQIEVSVD-EQGTLTYAFS 897 >UniRef50_A6GDL5 ClpA/B family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDL5_9DELT Length = 1221 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 180/697 (25%), Positives = 288/697 (41%), Gaps = 68/697 (9%) Query: 90 RAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQ 149 A + R ++ I + +L +S D + + G Sbjct: 128 DADEDQSEAQRAAALDEHLRGVIARD----IERVLAARSLSSYDYLQLLRGGNPYSLERL 183 Query: 150 SSDPGSQPNSEEQAG---------------GEERMENFTTNLNQLARVGGIDPLIGREKE 194 + + S+ +A + + + T++ R P++ RE+E Sbjct: 184 RVELEREEQSDPKARAQARRRRARDRSQAEARKLLSSVGTSVLAEVRRRRTVPILHRERE 243 Query: 195 LERAIQVLCRRRKNNPL-LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 + L R + L LVG GKTA+ GLA R ++ + P I L Sbjct: 244 IASL-DALLRGPERLALALVGPELSGKTAVVLGLAQRWLELERPARERLPVIVQTSGAQL 302 Query: 254 LAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS 313 +AG G E+R + ++ E +++L+ D + + SG D A I+P + Sbjct: 303 VAGQSGFGQLEQRVQDVMAAAEA-LDAVLYFDNLADLFA--RTSGELGDVAASIRPWIER 359 Query: 314 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP---KYEAHHD 370 G++R++G T + + ++ ++ + +T I+ +YE Sbjct: 360 GRVRLLGELTPERLEHHEKRHVGFFSVLNRLPVHALDAPQTRAILEAQARYDRRYEPKRP 419 Query: 371 V---------------RYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM-PV 414 R A + V+LA +Y + + P KA+ A Sbjct: 420 TLTLGPASPSASARMGRGKGGAAQPLVDLAERYFSYQAFPGKAMRFYQSLRATQETELDA 479 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 + + ++ + + + IP + + + + V GQ AI+ + E + Sbjct: 480 EGKPRPISPDVVYKGFSLHSGIPMFLLREDRGLEFARVVEYFGARVIGQRAAIDRVAETL 539 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVS 531 +AGL KP+ +FLF GPTGVGKTEV L++ L + RFDMSEYM+ Sbjct: 540 CTVKAGLQPAAKPLATFLFVGPTGVGKTEVAKTLARFLFGSPERMTRFDMSEYMDPLAAD 599 Query: 532 RLIGAPPGYVGFD-QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 RLI G D + G+LT V + P VLLLDE+EKAHP VF++LLQV G L+D Sbjct: 600 RLI------RGTDREDGVLTRRVRQQPFCVLLLDEVEKAHPAVFDLLLQVCGEGRLSDAR 653 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD-----------AMEEIKKIFTPE 639 GR F N +++MT+N G R G + D +E++ F PE Sbjct: 654 GRTTWFHNAIIIMTSNLGAAH-RRPQSGFGGGSSDADPKRAEAEAERYYLEQVDTHFRPE 712 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDR 697 F NR+D II F L I V + ++ + L ++GVSLE+ LAE+GY Sbjct: 713 FVNRIDRIIPFHPLDRAQIQAVARVSLTSVREREGLAERGVSLELEDGTLARLAEQGYSS 772 Query: 698 AMGARPMARVIQDNLKKPLANELLF-GSLVDGGQVTV 733 GAR + RV++D L P+A L G G V V Sbjct: 773 TYGARALRRVLEDRLVAPMARTLARLGGQGQGASVWV 809 >UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria RepID=A7ZQR5_ECO24 Length = 881 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 157/489 (32%), Positives = 242/489 (49%), Gaps = 38/489 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSV--DLVALRQELE 59 LN +L+ A + + H +T+EH LL LL + A D+ L Q L Sbjct: 13 LNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRYEWDIDTLWQSLL 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 A ++ LP S ER + Q + ++ ++L+A+ + Sbjct: 73 AHLD----TLPRSVRERPQLSEPLTALIRQAWLIASLEGDDPQIRSQHLLMALTEKPMLP 128 Query: 120 A----AYLLRKHEVSRLDVVNFISHGTRK--------DEPTQSSDPGSQPNS-------- 159 A LL V + + + + EP S+ PG Sbjct: 129 ACNDLWVLLSLSRVQFERLRPLLDAQSDECPARQPQVTEPLTSAQPGVATTDAPANTLTG 188 Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 ++ + FT ++ + AR G IDP+ GR+ E+ + + +L RRRKNNP+LVGE GVG Sbjct: 189 KQDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPILVGEPGVG 248 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN 279 KTA+ EGLA RI +G+VP+ + I +LD+G L AG +G+FE+R K ++ +++ Sbjct: 249 KTALVEGLALRIAEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSPE 308 Query: 280 SI-LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALA 338 + LFIDE HTIIGAG +GG DAANL+KP L+ G++R I +TT+ E+ FE+D AL Sbjct: 309 PVLLFIDEAHTIIGAGNQAGGA-DAANLLKPALARGELRTIAATTWSEYKQYFERDAALE 367 Query: 339 RRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKA 398 RRFQ + + EP + ++ GLK +Y HH V A++ AV L+ +Y+ R LPDKA Sbjct: 368 RRFQMVKVDEPDDDTACLMLRGLKARYAQHHGVHMLDSAIQTAVRLSRRYLTGRQLPDKA 427 Query: 399 IDVIDEAGARARLMPVSKRKKTVNVA--------DIESVVARIARIPEKSVSQSDRDTLK 450 +D++D AGAR R+ + + + + E++ PE S L Sbjct: 428 VDLLDTAGARVRMSLDTLPEPLTQLHARLAALDIEREAIEQDSVFYPEA--SPERLAELI 485 Query: 451 NLGDRLKML 459 +L D L+ Sbjct: 486 DLRDELQAE 494 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 125/464 (26%), Positives = 218/464 (46%), Gaps = 23/464 (4%) Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID-----ITEPSIEETVQI 357 A +L+ + +R+ T + + + + AL + I+ E S E ++ Sbjct: 427 AVDLLDTAGAR--VRMSLDTLPEPLTQLHARLAALDIEREAIEQDSVFYPEASPERLAEL 484 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 I+ L+ + +A + + LA + + R + ++ + R Sbjct: 485 ID-LRDELQAEAG--HLETQYQQEKRLAQQIMTLRQEGTDSTELQQQL--RTHQGFAPLL 539 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 V+ + +VVA IP S+ + ++ L ++ L+ V GQ A+ A+ + ++ A Sbjct: 540 ALDVDARAVATVVADWTGIPLSSLLRDEQSDLLSMEQSLENRVVGQSPALCAIAQRLRAA 599 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLI 534 + GL E+ P G FL GP+G GKTE + L+ L L+ ++SEY E HTVS+L Sbjct: 600 KTGLTPENGPQGVFLLTGPSGTGKTETALTLADTLFGGEKSLITINLSEYQEPHTVSQLK 659 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+ QGG+LT+AV K P++V+LLDE+EKAH DV N+ QV D G + D GR+ Sbjct: 660 GAPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREI 719 Query: 595 DFRNVVLVMTTNAGVRETER---KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 DFRN V++MT N G + + D +++ F P R +I+ Sbjct: 720 DFRNTVILMTANLGSDHIMQLLEEKPDATDADLHELLYPLLREHFQPALMARFQTVIY-R 778 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L + + +V+ + ++ +L Q G+ E++ + L GAR + ++ Sbjct: 779 PLGQEAMRAIVEMKLAQVVRRLRQHYGLETEINDSLYDALTAACLLPDTGARNIDSLLNQ 838 Query: 711 NLKKPLANELLFGSL--VDGGQVTVALDKEKNELTYGFQSAQKH 752 + L+ +LL Q+ + D E++ + F + + Sbjct: 839 QILPVLSQQLLAQQAAHRKPAQLRLGWD-EEDGIVLEFATEEMQ 881 >UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8B6K3_GIALA Length = 882 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 163/463 (35%), Positives = 258/463 (55%), Gaps = 23/463 (4%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELEA 60 +L+ + + ++ H H + H+ AL ++ + +A++ CS D+ A+R+ +E Sbjct: 8 TNDLQKVMTESIRVSQRHGHSLVNQYHIAAALFADDDSISSKAVQKCSGDVSAIRRAIET 67 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +++T V P + P + ++ + + + ++ ++ A + + Sbjct: 68 GLKKTPSVTPVPD---TPSPAGGYLGIINKMSAYAEEGRDEYLSTFHLAKAAAQDTDL-- 122 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A LR+ V+ R E + G NSE E +E + + A Sbjct: 123 ARCLREGRVT----------SNRFVEEIEKMKKGRSMNSEFAEDTCEALEKYCVEMVAKA 172 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 G DPLI R+ EL R +++L RR KNNP+L G +GVGKTAI EGLA RIV+ DVP+ + Sbjct: 173 EEGKYDPLIARDNELRRIVEILSRRTKNNPVLTGPAGVGKTAILEGLAQRIVRADVPQNI 232 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGG 299 + IY+LD+G+L+AG +YRG FE+R KA+L +L++ + NSILFIDEIHT+IGAG + G Sbjct: 233 RNARIYALDLGALIAGAQYRGQFEERLKAILDELKKSEGNSILFIDEIHTLIGAGGSKGT 292 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 DAANL+KP L+ G+IR IG+TT +E+ N DRA RRF ++ + EP++E+T+ I+ Sbjct: 293 S-DAANLLKPALARGEIRCIGATTTEEYRNHIASDRAFERRFAEVFVAEPNVEDTISILR 351 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYIN--DRHLPDKAIDVIDEAGARARLMPVSKR 417 GL +Y++HH +R T A+ AA +LA +Y+ RH PD AID++DEAGA R+ S+ Sbjct: 352 GLSGRYQSHHQIRITDGALVAAAQLANRYVRAMGRHNPDAAIDLLDEAGASVRVTLDSQP 411 Query: 418 KK--TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 + +N + + A E +D K L D +K Sbjct: 412 AQLDALNRKKLRLQIEEEALRRESEARNADSSISKRLADIIKE 454 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 189/776 (24%), Positives = 322/776 (41%), Gaps = 87/776 (11%) Query: 15 ARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELE--------------- 59 A A E R E+++ HL A + L V +E+E Sbjct: 97 AYAEEGRDEYLSTFHLAKAAAQDTDLARCLREGRVTSNRFVEEIEKMKKGRSMNSEFAED 156 Query: 60 --AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE--------VTGANVL 109 +E+ + A EE P ++ L+R V + +N V +L Sbjct: 157 TCEALEKYCVEMVAKAEEGKYDPLIARDNELRRIVEILSRRTKNNPVLTGPAGVGKTAIL 216 Query: 110 VAIFSE-QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER 168 + + +R + LD+ I+ + + + + + Sbjct: 217 EGLAQRIVRADVPQNIRNARIYALDLGALIAGAQYRGQFEERLKAILDELKKSEGNSILF 276 Query: 169 MENFTTNLNQLARVGG------IDPLIGREKELERAIQVLCRRRKNNP------------ 210 ++ T + G + P + R E+ +N+ Sbjct: 277 IDEIHTLIGAGGSKGTSDAANLLKPALAR-GEIRCIGATTTEEYRNHIASDRAFERRFAE 335 Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 + V E V T I++G + I D G+L+A R+ Sbjct: 336 VFVAEPNVEDT-------ISILRGLSGRYQSHHQIRITD-GALVAAA----QLANRYVRA 383 Query: 271 LKQLEQDTNSILFIDEIHTIIG-AGAASGGQVDAANLIKPLL---------------SSG 314 + + +I +DE + + Q+DA N K L + Sbjct: 384 MGR-HNPDAAIDLLDEAGASVRVTLDSQPAQLDALNRKKLRLQIEEEALRRESEARNADS 442 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT 374 I + +E SNI + + L ++ + E S + + I E +V T Sbjct: 443 SISKRLADIIKEISNIDMQIKPLEEQYNR----ERSSIDKISNIKARITALEDKLEVYTT 498 Query: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIA 434 V A +L I + + ++ EA + A + V ++ +VV++ Sbjct: 499 RGEVSKAADLQYGAIPELRDELRRLEKEQEAASYAHHDEKAMLSAVVTEMEVANVVSKWT 558 Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 IP ++++DR+ L +L + V GQ+ A++A+ +I ARAGL +P+GSFLF Sbjct: 559 GIPVNKLTRTDREKLLSLEQTISSKVIGQEPAVKAVCSSILRARAGLSRPTQPLGSFLFL 618 Query: 495 GPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD 551 G +GVGKT + +++ L ++ DMSEY E+H+VSRLIGAPPGYVG++Q G LT+ Sbjct: 619 GSSGVGKTYLAKTIAEELYDSVDSMIHIDMSEYTEQHSVSRLIGAPPGYVGYEQAGQLTE 678 Query: 552 AVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE 611 AV + +AV+L DEIEKAHP + ILLQ++D G LTD G DF N V+++T+N G RE Sbjct: 679 AVSRKRYAVVLFDEIEKAHPKILTILLQILDEGRLTDGKGNCVDFTNTVIMLTSNLGSRE 738 Query: 612 TERKSIGLIHQDNSTDAMEE----IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 + + + A E ++ PE NRLD++I F+ L+ D + ++ Sbjct: 739 LLQCYHSNVSASQAKQAKEHVIGVVRSTLPPELINRLDDLIVFNPLTKDALVKIFRSLCG 798 Query: 668 ELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 +L+ +L + G+ L V + +A + D GARP+ R I+ + +A +L+ Sbjct: 799 QLEERLQHESGLRLRVDDAVAD-IALRDSDMVYGARPLRRFIEREITTAVARKLIE 853 >UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular organisms RepID=Q4FXS7_LEIMA Length = 867 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 157/448 (35%), Positives = 249/448 (55%), Gaps = 21/448 (4%) Query: 14 FARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPA 71 A AR+ + ++ HL + + + A + +++ LEA ++ +PA Sbjct: 20 AALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLGA--ASVKDGLEARVDAIPTQMPA 77 Query: 72 SEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSR 131 + +P RV+ A + G + + L+A+ +E +L + Sbjct: 78 PTQ---PRPNSDMMRVMNTAEQERAALGDTLMAADHFLLALHESKE--VGRILDAAGAGK 132 Query: 132 LDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGR 191 + + + G + S+ Q E + + +L + A G +DP+IGR Sbjct: 133 KAIRATLLEMRK----------GKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVIGR 182 Query: 192 EKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 251 E+ R I+VL RR KNNP+L+GE GVGKTAI EG+A ++V+GDVP+ ++ I+SLD+G Sbjct: 183 ADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLDMG 242 Query: 252 SLLAGTKYRGDFEKRFKALLKQLEQDTN-SILFIDEIHTIIGAGAASGGQVDAANLIKPL 310 +L+AG KYRG+FE+R KA+L ++++ N ILFIDEIH ++GAG + G +DAANL+KPL Sbjct: 243 ALIAGAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGA-MDAANLLKPL 301 Query: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD 370 L+ G++R IG+TT +E+ EKD A RRF + + EPS+EE I+ GLK +YE HH Sbjct: 302 LARGELRTIGATTLEEYRQYVEKDAAFERRFMPVQVHEPSVEECTSILRGLKDRYEQHHG 361 Query: 371 VRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVV 430 V+ T KAV A +LA +YI +R LPDKAID+IDEA A R+ S+ + + + + Sbjct: 362 VQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQL 421 Query: 431 ARIARIPEKSVSQSDRDTLKNLGDRLKM 458 R ++ S ++ LK + ++ Sbjct: 422 EIEERALQRDKDASAKERLKAVKAEIQK 449 Score = 357 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 208/803 (25%), Positives = 345/803 (42%), Gaps = 81/803 (10%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 N ++ +N A M +H LLAL + L+A A+R L Sbjct: 84 NSDMMRVMNTAEQERAALGDTLMAADHFLLALHESKEVGRILDAAGAGKKAIRATLLEMR 143 Query: 63 EQTTPVLPASEEERDT-----------QPTLSFQRVLQRAVFHVQSS------------- 98 + ++ ++ V+ RA +++ Sbjct: 144 KGKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVIGRADEILRTIRVLSRRTKNNPVL 203 Query: 99 -GRNEVTGANVLVAIFSEQ-ESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQ 156 G V ++ I + L + LD+ I+ + E + Sbjct: 204 IGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLDMGALIAGAKYRGEFEERLKAVLN 263 Query: 157 PNSEEQAGGEERMENFTTNLNQLARVGGID------PLIGREK----------ELERAIQ 200 E ++ L G +D PL+ R + E + ++ Sbjct: 264 EVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKPLLARGELRTIGATTLEEYRQYVE 323 Query: 201 ---VLCRRRKNNPLLVGESGVGK-TAIAEGLAWRIVQGDVPEVMADCTIY--SLDIGSLL 254 RR P+ V E V + T+I GL D E I ++ + + L Sbjct: 324 KDAAFERRFM--PVQVHEPSVEECTSILRGL------KDRYEQHHGVQITDKAVVVAAQL 375 Query: 255 AGTKYRGDFE-KRFKALLKQLEQDTNSILFID--EIHTIIGAGAASGGQVDAANLIKPLL 311 AG F + L+ + + L EI + + A K Sbjct: 376 AGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQLEIEERALQRDKDAS 435 Query: 312 SSGKIRVIGSTTYQEFSNIFEKDRALARRFQ--KIDITEPSIEETVQIINGLKPKYEAHH 369 + +++ + + E + EK L +++ + I E + ++ K K E Sbjct: 436 AKERLKAVKA----EIQKVEEKLGPLLAKYEQERGRIDELQATQAK--LDEKKVKLERAE 489 Query: 370 DVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESV 429 +R A + +P D I + + TV DI +V Sbjct: 490 RMRDMETAAD---------LKYNVIP-ILQDRIRSLKEAIEKQKATMLQGTVTETDIATV 539 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 V+R IP +SQ++R+ L +L D+L + V GQD+A+ + EAI +RAGL +P G Sbjct: 540 VSRWTNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTG 599 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 SFLF GPTGVGKTE++ ++ L + ++R DMSEYME+H+V+RLIGAPPGYVG ++G Sbjct: 600 SFLFLGPTGVGKTELSKAVASELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEG 659 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G LT+ V + P+ V+LLDE+EKAHP+VFN+LLQV+D+G LTD++GR DF N +++MT+N Sbjct: 660 GQLTEPVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVDFCNTIIIMTSN 719 Query: 607 AGVRETERKSIG-LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKF 665 G + + ++ M E++K F PEF NRLD+II F L + ++D Sbjct: 720 LGAQYLQNMDTSPKAYEVAQAQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLI 779 Query: 666 IVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSL 725 EL +L + + + +++EA+ ++ E +D MGARP+ R ++ N+ L+ ++ L Sbjct: 780 TEELNGRLKDQSIRVSLTEEAKQYVLESAFDADMGARPLRRWVEKNITTELSRMIISQEL 839 Query: 726 VDGGQVTVALDKEKNELTYGFQS 748 V V L +L++ + Sbjct: 840 SPNSTVKVTLSSNHKKLSFSVKR 862 >UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MLM7_9CHLO Length = 886 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 172/512 (33%), Positives = 269/512 (52%), Gaps = 46/512 (8%) Query: 265 KRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTY 324 ++ L K+ +D I+++H SGG++ A+ L L+ +R T Sbjct: 370 RKMSQLCKE--RDQIKARLIEDMHK-----HGSGGKMAASCLH--ELNEELVR--ERTKQ 418 Query: 325 QEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVEL 384 Q+ EK++ +R +++ E S E +++N + + +A +V+ A++ A + Sbjct: 419 QKLLRDLEKEKKASREYKR-ATAELSFSER-RLVNAHEKQRQAADNVKKVTVALQRAQDT 476 Query: 385 ------------AVKYINDRHLPDKAIDVIDEAGARARLMPVS--------------KRK 418 A + D L DK + E ARA++ K Sbjct: 477 DNQAEVLEAKAAATRAEQDAKLADKETLHLSEIIARAKVECTKAEEEIMSISEGNGLMTK 536 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V DI +VV+R +P + S++ L L L V GQD A+ ++ EA++ +R Sbjct: 537 DEVTDVDIATVVSRWTGVPVAKLVASEKAKLLQLDAELHQRVIGQDHAVTSVAEAVQRSR 596 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIG 535 A L + PV SF+F GPTGVGKTE+ L+ L L+R DMSEYME+H+V+RLIG Sbjct: 597 ADLSDPNGPVASFMFLGPTGVGKTELAKALANYLFNSDNALIRLDMSEYMEKHSVARLIG 656 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGY+G+D+GG+LTDAV + P++++L DEIEKAH DVFN+LLQ++D G +TD GR Sbjct: 657 APPGYIGYDEGGMLTDAVRQKPYSIVLFDEIEKAHVDVFNVLLQLLDEGHVTDTQGRTVS 716 Query: 596 FRNVVLVMTTNAGVRET----ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 FRN +++MT+N G E + + M ++ F PEF NRLD I F+ Sbjct: 717 FRNCLIIMTSNLGSDEIAFGDRGRRGRRGPGEMKDKVMAHVRAHFRPEFINRLDEFIVFE 776 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 LS I ++V +L +++ + + L++ A ++LA KG+D GARP+ R IQ Sbjct: 777 PLSHSQIMEIVQLQCNKLVERVEGQRMKLDLQPSAIDYLARKGFDPTYGARPVKRAIQSE 836 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 L + +AN+LL G + + V+ DK+ LT Sbjct: 837 LIQNMANKLLRGIFQEDDTIVVSADKDGLALT 868 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 119/388 (30%), Positives = 196/388 (50%), Gaps = 8/388 (2%) Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 +E+ L S + + ++ A+ S + + ++ A Sbjct: 5 VERVRVALMMSAGVTTAAVLVLSSKTVRGAIAGTLKSVASTIQPTELIEAFDKSDTPVIN 64 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEE--RMENFTTNLNQL 179 + + ++ G D ++ EE +E F T++ + Sbjct: 65 TKMTNISSVQSQASEPLNTGIPHDIAPKNMTTTGTLGVRGDDPDEELSALERFCTDVTEE 124 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G +DPL+GR+ E+ R + +LCRR KNNP+L+G GVGKTAI EGLA RIV GDVP Sbjct: 125 AKQGVLDPLVGRDDEVRRLVHILCRRTKNNPILLGRPGVGKTAIVEGLAQRIVAGDVPTS 184 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL---EQDTNSILFIDEIHTIIGAGAA 296 + + LD+G++ AG + G+FE+R ++ ++ Q I+FID+IH + Sbjct: 185 LLGARLLELDLGAVGAGCQMPGEFEERLSIVVSEVVEASQKGGIIMFIDDIHNLCPP--- 241 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 G + A ++KP L G ++ IG++T ++F E+D AL RRFQ++ + EP I +TV Sbjct: 242 PPGGNNGAAILKPALGRGLLKCIGASTVEKFKKSIEQDAALERRFQQVPVAEPDIAQTVS 301 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 ++ GL+P+YE HH ++ AV AA +LA +Y+ R LPDKAID++DEA A R+ K Sbjct: 302 VLRGLRPRYETHHSIKIHESAVVAAAKLASRYVQGRCLPDKAIDLLDEAAAAVRMQKSLK 361 Query: 417 RKKTVNVADIESVVARIARIPEKSVSQS 444 + V S + + + + + Sbjct: 362 PEDLDVVDRKMSQLCKERDQIKARLIED 389 Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 100/280 (35%), Gaps = 34/280 (12%) Query: 49 VDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANV 108 V+ +++ +++ T L +++ + L + RA + + + ++ Sbjct: 450 VNAHEKQRQAADNVKKVTVALQRAQDTDNQAEVLEAKAAATRAEQDAKLADKE---TLHL 506 Query: 109 LVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER 168 I + +S + + T D T S P ++ A + + Sbjct: 507 SEIIARAKVECTKAEEEIMSISEGNGLMTKDEVTDVDIATVVSRWTGVPVAKLVASEKAK 566 Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRR-----KNNPL----LVGESGVG 219 + L+Q +IG++ + + + R R N P+ +G +GVG Sbjct: 567 LLQLDAELHQR--------VIGQDHAVTSVAEAVQRSRADLSDPNGPVASFMFLGPTGVG 618 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSL--DIGSLL-AGTKYRGDFEKRFKALLKQLEQ 276 KT +A+ LA + D + D + Y + L+ A Y G E L + Q Sbjct: 619 KTELAKALANYLFNSDNALIRLDMSEYMEKHSVARLIGAPPGYIGYDEGGM--LTDAVRQ 676 Query: 277 DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 SI+ DEI VD N++ LL G + Sbjct: 677 KPYSIVLFDEI---------EKAHVDVFNVLLQLLDEGHV 707 >UniRef50_A9ERV8 ATP-dependent Clp protease, ATP-binding subunit,two ATP-binding domains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ERV8_SORC5 Length = 790 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 181/663 (27%), Positives = 299/663 (45%), Gaps = 48/663 (7%) Query: 115 EQESQAAYLLRKH------EVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGE-E 167 E S A +LR+ S + +F G P S + E Sbjct: 144 EDLSIAPDVLRQLVTSALLGESPRSLFDFRREGDEYVRPWSPRRMERAGRSARRPEDERP 203 Query: 168 RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRR---KNNPLLVGESGVGKTAIA 224 + + +L + A + +G +ELERA+ + R + LLVG GVGKT Sbjct: 204 TLHAVSEDLVEKAARQRLPLAVGESEELERALPLFDAARATSMPSILLVGGPGVGKTTWV 263 Query: 225 EGLAWRIVQGDVPEVMADCT-IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILF 283 LA R + A ++S LLAG KY G ++ R L+ +L + Sbjct: 264 HRLARRFAAWRRDKARASSPGLFSTSADRLLAGMKYLGMWQARCLRLVSELSHEG----- 318 Query: 284 IDEIH--TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 D +H ++ ++ P L +G++ +I T E + +L F Sbjct: 319 -DLLHVGALLPLLRPQPDGASIGDVFLPALRTGEVSLIAECTEPELEACQRRAASLVACF 377 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 Q + + EP ++ + + E VR + V+ + D P KA Sbjct: 378 QIVRLREPDAAAVPALLAEYEARKET--RVRLHPAGKKRLVQHLAMFRRDVLFPGKAFRF 435 Query: 402 ID----EAGARARLMPVSKRK---KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD 454 D EAG RA + + + D+ AR + +P + ++ + + + Sbjct: 436 FDWLAQEAGTRAGAEAEAAGAAPARVLYPRDVSEAYARHSGLPIELIADEIPASAETIAR 495 Query: 455 RLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI 514 LK V GQD+A + + +AG+ +P G+ LF GPTGVGKTE+ +L++++ Sbjct: 496 GLKRRVIGQDEACDTAARVLARFKAGMNDPERPCGTLLFVGPTGVGKTELAKELTRSMFG 555 Query: 515 E---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHP 571 + ++R DMSEY + +RL+ A P L V + P +++LLDEIEKAH Sbjct: 556 DEGRMIRLDMSEYRLPGSSARLLAAGP------DATTLAQRVRQEPLSLVLLDEIEKAHR 609 Query: 572 DVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST----- 626 +VF++LL ++ G LTD +GR DFR V++VMT+N GV + R +G D Sbjct: 610 EVFDLLLGILGEGRLTDEDGRHVDFRMVLIVMTSNLGVAD--RAPVGFGGDDGRALPPGA 667 Query: 627 --DAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEV 682 A +++ F PEF NR+D+++ F L D + ++VD + + + + L ++ + L V Sbjct: 668 RRGAPAGVREHFRPEFVNRIDHVVQFRGLGRDSVLRIVDLELAKAEARTGLVRRNLRLRV 727 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 EAR++LAE G+D GARP+ RVI++ + P+A + +V VA E+ Sbjct: 728 LPEARSFLAEAGFDPRRGARPLKRVIEERVITPIAARMAEDPGCRDREVVVAGGGAGLEV 787 Query: 743 TYG 745 +G Sbjct: 788 RFG 790 >UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L5D3_9GAMM Length = 917 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 149/476 (31%), Positives = 232/476 (48%), Gaps = 31/476 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL--EACSVDLVALRQELE 59 L+ + A + + +EHL LALL P + L + +L ++L Sbjct: 12 LDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRSGILPESLERDLN 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQES 118 I Q + R + ++ + A S + ++L+A+ +E + Sbjct: 72 DEISQF-----KTGNSRTPVFSQHIPKLFEHAWLIASLDSETTRIRSGHLLLALLTEPDL 126 Query: 119 QAAYL-----------------LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEE 161 K + V + D G+ P + Sbjct: 127 AQLAYRGSKLFVRFKRDELKHDFAKLTEGSQEAVQTVRFADASAAGEAGEDEGAVPGEAK 186 Query: 162 QA-GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 ++ FTTNL Q AR G IDP+IGR+ E+ + I +L RRR+NNP+L GE+GVGK Sbjct: 187 GGLSKTPALDQFTTNLTQRARDGKIDPVIGRDGEIRQVIDILMRRRQNNPILTGEAGVGK 246 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-N 279 TA+ EGLA RI DVP+V+ +++LD+G L AG +G+FE R K ++ ++++ Sbjct: 247 TAVVEGLARRIADKDVPDVLQGVELHTLDMGLLQAGASVKGEFENRLKNVIDEVKKSPHP 306 Query: 280 SILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 ILFIDE HT+IGAG + GQ DAANL+KP L+ G++R I +TT+ E+ FEKD ALAR Sbjct: 307 IILFIDEAHTMIGAGGTA-GQNDAANLLKPALARGELRTIAATTWGEYKKYFEKDAALAR 365 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 399 RFQ + + EPS ++ G+ EAH ++R +AV AV L+ +YI+ R LPDKA+ Sbjct: 366 RFQVVKVEEPSEALAAAMLRGMVGLMEAHFNIRVLDEAVTEAVRLSHRYISGRQLPDKAV 425 Query: 400 DVIDEAGARAR-LMPVSKRKKTVNVADIESVVARIARIPEKSV--SQSDRDTLKNL 452 V+D A A+ + ++ + A I+ + ++ S + L L Sbjct: 426 SVLDTACAKVALGQSATPAIIEDTRKHLDRLQAEISALQRETAGGSDQHGERLAEL 481 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 102/356 (28%), Positives = 188/356 (52%), Gaps = 14/356 (3%) Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 +A R V+ + +V+ +P + + + T++ LG+ L V GQ Sbjct: 564 QAELRELQGETPMVPLQVDGTVVAEIVSAWTGVPLGRMVKDEIRTVRTLGNLLVERVIGQ 623 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFD 520 D A++A+ + ++ A A L +KP G F+F GP+GVGKTE + L+ L +L+ + Sbjct: 624 DHALDAIAQRVRTATAKLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGERKLVTIN 683 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MSEY E H+VS L G+PPGYVG+ +GG+LT+AV ++P++V+LLDE+EKAHPDV + QV Sbjct: 684 MSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQV 743 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS-----TDAMEEIK-K 634 D G + D GR+ DFRN ++++T+N G + + + ++ +DA+ + + Sbjct: 744 FDKGMMDDAEGREIDFRNTLIILTSNIGSSQIMQACLNKPAEEIPGAEALSDALRPVLMR 803 Query: 635 IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNWLAEK 693 F P F RL + ++ ++ DV+ Q++ + ++ + + + + + Sbjct: 804 TFKPAFLGRLKVVPYY-PINDDVLAQIITLKLGRIRDRVIANHKATFSWDDSLVEAVLAR 862 Query: 694 GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVT-VAL-DKEKNELTYGFQ 747 + GAR + ++ L +A +L ++ +G ++ + + +K + Y Sbjct: 863 CTEVDSGARNVDHILNGTLLPEIAESVLA-AMAEGNRINAIKVTAGKKGDFKYKVS 917 >UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RIQ4_9ACTO Length = 832 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 160/445 (35%), Positives = 248/445 (55%), Gaps = 22/445 (4%) Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTA- 375 R + +E + E D A A R +++ E + ++ + + E H + + Sbjct: 388 RAVRRLEIEEMALAKEPDAASAERLERLRKELADKREQLTALSE-RWQTEKSHITKLSTA 446 Query: 376 -KAVRAAVELAVKYINDRHLPDKA-------------IDVIDEAGARARLMPVSKRKKTV 421 + + A + D L A + +E AR + + K+ V Sbjct: 447 KEELERLGGEAERAERDGELERAAELRYGRIPALKNDLAKAEEELARLQAD-GAMLKEEV 505 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 DI +VVA IP + + + L + + L V GQ +A+ A+++A++ ARAG+ Sbjct: 506 GADDIATVVASWTGIPAGRLLEGETAKLLRMEESLGARVVGQTEAVSAVSDAVRRARAGV 565 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPP 538 +P GSFLF GPTGVGKTE+ L++ L + ++R DMSEY E+H+V+RL+GAPP Sbjct: 566 ADPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPP 625 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+++GG LT+AV + P++V+LLDE+EKAHPDVF++LLQV+D+G LTD GR DFRN Sbjct: 626 GYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRN 685 Query: 599 VVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 +L++T+N G + L + + ++ F PEF NRLD+I+ F L D + Sbjct: 686 AILILTSNLGSSMI--SDLTLAEEQRREGVLAVVRSHFKPEFLNRLDDIVVFAALLGDDL 743 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 +VD + ++ +L + ++L+VS+ AR WLAE GYD GARP+ R++Q + LA Sbjct: 744 RAIVDIQLDRMRARLADRRLALDVSEAARGWLAEHGYDPIYGARPVRRLVQSAIGDQLAR 803 Query: 719 ELLFGSLVDGGQVTVALDKEKNELT 743 LL G++ DG V V L K+ LT Sbjct: 804 ALLSGAIRDGDTVQVDLADGKDGLT 828 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 332 EKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYIND 391 EKD AL RRFQ + + EP+I +T+ I+ GLK +YE HH VR T A+ AA L+ +YI D Sbjct: 295 EKDPALERRFQPVLVGEPTIADTIGILRGLKERYEVHHGVRITDAALVAAAALSDRYITD 354 Query: 392 RHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKN 451 R LPDKAID++DE+ +R R+ S + V V +IE V R+ + D + + Sbjct: 355 RFLPDKAIDLVDESASRLRMEIDS---RPVEVDEIERAVRRLEIEEMALAKEPDAASAER 411 Query: 452 LGDRLKMLVFGQDKAIEALTEAIKMARA 479 L RL+ + + + + AL+E + ++ Sbjct: 412 LE-RLRKELADKREQLTALSERWQTEKS 438 Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 108/299 (36%), Gaps = 37/299 (12%) Query: 32 LALLSNPSAREA--LEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQ 89 +AL P A A LE +L R++L A E+ E+ + + L+ Sbjct: 398 MALAKEPDAASAERLERLRKELADKREQLTALSERW------QTEKSHITKLSTAKEELE 451 Query: 90 RAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQ 149 R + + R+ G A A L + ++ + G E Sbjct: 452 RLGGEAERAERD---GELERAAELRYGRIPA--LKNDLAKAEEELARLQADGAMLKEEVG 506 Query: 150 SSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCR----- 204 + D + S +E T L ++ G ++G+ + + + R Sbjct: 507 ADDIATVVASWTGIPAGRLLEGETAKLLRMEESLGAR-VVGQTEAVSAVSDAVRRARAGV 565 Query: 205 ----RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL--DIGSLL-AGT 257 R + L +G +GVGKT +A+ LA + + V D + Y + L+ A Sbjct: 566 ADPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPP 625 Query: 258 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 Y G +E+ L + + + S++ +DE+ D +++ +L G++ Sbjct: 626 GYVG-YEEG-GQLTEAVRRRPYSVILLDEV---------EKAHPDVFDVLLQVLDDGRL 673 >UniRef50_A6GDL2 ClpA/B family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDL2_9DELT Length = 806 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 155/571 (27%), Positives = 254/571 (44%), Gaps = 48/571 (8%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 R + LLVG GVGK+ E LA + I+S ++AG Y G + Sbjct: 221 RETPASILLVGGPGVGKSTWIEALAREFSRRRKGATGTSPRIWSTSAERIIAGMMYLGQW 280 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTT 323 E+R ++ +L + + L + ++ ++ G+ A+ P + +G + +I Sbjct: 281 EQRCLDIIHELSHEGD-YLDVGQLPALLDTR---TGRSSIADFFLPAIEAGDLSLIAECH 336 Query: 324 YQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVE 383 +E+ + + L F I I S ++ + + ++R +A+R V+ Sbjct: 337 PREYEQLKTRAPVLLAAFNVIPIAPTSTTAMPGLLRAYQGRVNPRLELR--PEALRRVVQ 394 Query: 384 LAVKYINDRHLPDKAIDVID---------EAGARARLMPVSKRKKTVNVA---------- 424 + D P K +D E A + S A Sbjct: 395 HLELFRRDTCFPGKGFRFLDWLNQQYGHDELAALTQRPSPSPSSSPSQDAAEPPPATGRS 454 Query: 425 -----------DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 D + +R +P + +S+ + L RL+ V GQDKA Sbjct: 455 GEEPSTVLRGPDASAAFSRYTGLPLELISEETVAGPEQLAARLREGVVGQDKAAATAARV 514 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTV 530 + +AGL +PVGS F GPTGVGKTE+ QL++ + ++R DMSEYM + Sbjct: 515 LARFKAGLDDPERPVGSLFFVGPTGVGKTELAKQLARYMFGDADRMIRLDMSEYMLGGSA 574 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 R++ PG L + V + P +++LLDEIEKAHP+VF++LL V+ G +TD Sbjct: 575 QRMLAVGPGVE------SLAERVRRQPLSLILLDEIEKAHPEVFDLLLAVLGEGRMTDAA 628 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAME-EIKKIFTPEFRNRLDNIIW 649 G DFR ++VMT+N GV E G + + +++ F PEF NR+D ++ Sbjct: 629 GSLVDFRMTLIVMTSNLGVSERGPAGFGGDDEGARERGFDAAVRRHFRPEFFNRIDFVVP 688 Query: 650 FDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 F LS I ++V + + + L ++G+ LEVS+ AR LAE G+ GARP+ RV Sbjct: 689 FRSLSPADIQRIVGLELAAMAKRTGLARRGLRLEVSEAARATLAEWGWHPTRGARPLKRV 748 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 +++ + PL+ + + V V E Sbjct: 749 LEEQVMAPLSVLVARRPKLRDQSVWVRTHAE 779 >UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subunit n=63 Tax=Bacteria RepID=Q2SEG4_HAHCH Length = 919 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 142/477 (29%), Positives = 236/477 (49%), Gaps = 19/477 (3%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELEA 60 + SL A++ RH + +EH+LL +L + LE VD+ + +EL Sbjct: 14 TSVVRKSLEDGLRLAQQERHSSLEIEHVLLKVLEQSDSDLDRVLEQLGVDIGKVSRELSQ 73 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + P + + + G N ++ A++ A+ S + Sbjct: 74 TVGKFHRDNPRDMVPFSPLVVDALK---AGWLLASVEMGVNFISSAHLFAAVMSHN-TMR 129 Query: 121 AYLLRK----HEVSRLDVVNFISHGTRKDEPTQS--SDPGSQPNSEEQAGGEERMENFTT 174 LL E+S V+ + T + +++ ++ +T Sbjct: 130 NQLLSSVKTLQEISLEKVLPAVKAVTGQSSESRAYLKAAAGGGAPAAPTAQGGALQKYTV 189 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 NL + A IDP++GR+ E+ + I +L RRR+NNP+L GE+GVGKTA+ EGLA RI Q Sbjct: 190 NLTERALNNEIDPVLGRDPEIRQCIDILTRRRQNNPILTGEAGVGKTAVVEGLALRIAQK 249 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGA 293 DVPE + I+ LD+G L AG +G+FE+R K+++++++ I+FIDE HT+IGA Sbjct: 250 DVPEPLQGVHIHVLDLGLLQAGASMKGEFEQRLKSVIEEVKASPAPIIMFIDEAHTMIGA 309 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G GQ DAANL+KP L+ G++R I +TT+ E+ FE+D AL RRFQ + + EP+ Sbjct: 310 GGKE-GQGDAANLLKPALARGELRTIAATTWAEYKKYFERDPALTRRFQVVKVEEPTEAV 368 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR-LM 412 + ++ G+ HH+VR + A+ AV+L+ +YI R LPDK + ++D A AR Sbjct: 369 AIDMLRGISKILAIHHNVRISDDAIIQAVKLSARYIPGRQLPDKGVSLLDTACARVSLSQ 428 Query: 413 PVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNL----GDRLKMLVFGQDK 465 + I+ + + I ++++S + L L+ + Q + Sbjct: 429 SATPSLIEDTRRRIQQIDTNLDLISQENISSGEYHETLELLTEEKAVLEASLAAQTE 485 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 115/412 (27%), Positives = 195/412 (47%), Gaps = 25/412 (6%) Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK- 416 + ++E D+ AK + +L Y + D + DE A ++ + Sbjct: 480 LAAQTEQWEKEKDLI--AKILEVRTKLEQDYQAKKGPEDAGDRLSDEEVAELQVEFKNLF 537 Query: 417 ------------RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD 464 V+ + VVA IP + + + + NL ++L+ V GQ Sbjct: 538 AALASAQGDQPLMMPHVDGQAVAEVVANWTGIPVGKMVSDEINGILNLHEQLEKRVIGQS 597 Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDM 521 A+EA+ +AI+ +RAGL KP+G FL GP+GVGKTE + L+ L L +M Sbjct: 598 HALEAIAQAIRTSRAGLTDPRKPIGVFLMVGPSGVGKTETALALADTLFGGEQNLTVINM 657 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM 581 +E+ E H VS L+G+PPGYVG+ +GG+LT+A + P++V+LLDE+EKAH V ++ + Sbjct: 658 AEFKEEHKVSMLLGSPPGYVGYGEGGVLTEAARRKPYSVILLDEMEKAHQGVQDVFYNLF 717 Query: 582 DNGTLTDNNGRKADFRNVVLVMTTNAG---VRETERKSIGLIHQDNSTDAME-EIKKIFT 637 D G++ D GR DF+N V++MT+NAG +R +S D D+M E+ K F Sbjct: 718 DKGSIKDGEGRDIDFKNTVIIMTSNAGEEAIRAICAQSEEKPEPDVMLDSMRHELLKYFK 777 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYD 696 P F R N+I + L + + ++ + + ++ G + ++ + + + Sbjct: 778 PAFLGRA-NVITYYPLDDENLFKICRINMDRIARRVRNHYGAAFTYDEDVLLNIVARSQE 836 Query: 697 RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDK-EKNELTYGFQ 747 GAR + ++ + L+ E L + + E+ Y F Sbjct: 837 VDTGARNIEHILNRTVLPELSTECLSRLANGEHIEHIHISATEEGNFGYLFN 888 >UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Proteobacteria RepID=A6FZR3_9DELT Length = 921 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 152/445 (34%), Positives = 231/445 (51%), Gaps = 19/445 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 L+ L A RA + + + EHLL ++ + A + L+ D R L Sbjct: 12 LSPVSTGMLEAAVGRAAQGQFYEIVPEHLLYGIVGQEDGDAAQILKHFGQD----RLRLV 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 IE+ + +R FQ + G + ++L+ Sbjct: 68 GRIEKVLESMKTGNAKRPVFSEALFQWIEDAWTLSSLLYGVATLRTGHLLLQFCERASRY 127 Query: 120 AAYLLRKHEVSRLDVV-----------NFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER 168 A + E +V+ N + S G+ P + Sbjct: 128 TAEDFPELEAIDTEVLRREFSSVVFNSNELDDVASSGGGGARSGRGAAPGEAGAPSADSA 187 Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + FT +L Q AR G IDP+ GR +E+ + + +L RRRKNNP++VGE GVGKTA+ EGLA Sbjct: 188 LGQFTVSLTQEARDGRIDPIFGRHREIRQIVDILARRRKNNPIIVGEPGVGKTALVEGLA 247 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEI 287 +IV GDVP+++ + + +LD+G L AG +G+FEKR KA++ +++ T ILFIDE Sbjct: 248 LQIVSGDVPDLLKNVELIALDMGLLQAGASVKGEFEKRLKAVISEVKASPTPIILFIDEA 307 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT+IGAGA GG DA+NL+KP L+ G++R + +TT+ E+ FEKD AL RRFQ + Sbjct: 308 HTLIGAGANKGGS-DASNLLKPALARGELRTVAATTWSEYKKYFEKDPALERRFQPVKCD 366 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS+E+ V ++ GL KYE H V +AV AA EL+ +YI+ R LPDKA+D++D A A Sbjct: 367 EPSVEDAVVMLRGLAGKYEEAHGVTIRDEAVVAAAELSGRYISGRQLPDKAVDLLDTAAA 426 Query: 408 RARLMPVSKRKKTVNVADIESVVAR 432 R ++ +K ++ + + + R Sbjct: 427 RVKIEQGAKPQRIEELELELASLDR 451 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 174/348 (50%), Gaps = 19/348 (5%) Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 + + VVA IP + ++ L D L V GQ+ A+ ++ Sbjct: 578 EEDPLVHHECDADVVAKVVANWTGIPVGKMKADTIGSVLALEDVLGSRVKGQEPAVRVVS 637 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERH 528 E ++MA AG+ + P+G LF G +GVGKTE+ + L+ L + +MSE+ E+H Sbjct: 638 ETVRMAYAGVRDPNTPIGVLLFVGTSGVGKTEMALSLADQLYGGDRFMTTINMSEFQEKH 697 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 TVSRLIG+PPGYVG+ +GG+LT+AV + P++V+LLDE EKA PDV N+ QV D G L D Sbjct: 698 TVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDECEKADPDVMNLFYQVFDKGVLND 757 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKK----IFTPEFRNRL 644 GR DFRN ++++T+N R G + + +E I+ F P R+ Sbjct: 758 GEGRTVDFRNTIIILTSNLASDTIMRLYQG-DEAPATEEVVEAIRPTVSAHFKPALLARM 816 Query: 645 DNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQEARNWLAEKGYDRAMGARP 703 + + + +++ ++ + +L+ +L + + S E + L + D GAR Sbjct: 817 TMVPF-RPIGPEIMREIAILKLRKLERRLRETHEIETTFSDELLDELVRRCTDADTGARN 875 Query: 704 MARVIQDNLKKPLANELL----FGSLVDGGQVTVALDKEKNELTYGFQ 747 + ++ +L LA LL G + Q+ + L E ++ F Sbjct: 876 VDHTLRASLMPALARTLLEYMADGEIPP--QLEIGLSPEG---SWRFD 918 >UniRef50_Q1D2Y9 ClpB family protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D2Y9_MYXXD Length = 1149 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 159/627 (25%), Positives = 290/627 (46%), Gaps = 26/627 (4%) Query: 130 SRLDVVNFISHGTRKD--EPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDP 187 +R D + + D EP + + + +++ ++LA+ G +D Sbjct: 207 TREDGEDEDTEALDLDSWEPRRRTAHRGPGEPPAKPPPTPTLDSVGVAWHRLAQEGQLDA 266 Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS 247 ++ + L + +LVG SGVGKT++ LA + E Y Sbjct: 267 AYEQDALVALLRTRLAAKDAEPVVLVGPSGVGKTSVLHALAQSLRAPTATEAERARPFYF 326 Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLI 307 LD L+AG + GD++++ ++ + ++L + ++ AG ++ + A L+ Sbjct: 327 LDGSRLIAGEGFFGDWQQQVLRAFREA-TEARALLSLGHAVELLDAGKSAHSDQNVAQLL 385 Query: 308 KPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEA 367 PLL++ + V+ T + ++ + +++ + AR F + + EP+ + +I+ + Sbjct: 386 LPLLAARDVAVMAEATEETWAQVEQRNTSFARLFSVVRVAEPTPDALGRIVAKVAEDDAL 445 Query: 368 HHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIE 427 ++ A+ A L +++ + + A + +V + Sbjct: 446 AAAMQVQPDALDEARFLCRRFLPYGAQVGNTVAFVRRLLA----SCAQASRTSVTRLEAT 501 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 A + IPE + ++ D L V GQD A+E + + +AG+ +P Sbjct: 502 RQFASESGIPEHLLRDDQPLASAHVRDFLASRVMGQDAAVERAASVVSVLKAGMSDVRRP 561 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 +G LF GPTGVGKTE++ L++ L ++R DM EY + RL+G + Sbjct: 562 LGVLLFVGPTGVGKTELSKALAELLFGAKERMVRLDMGEYAGPDALLRLMGDG------E 615 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 G LT AV + P V+LLDE+EKAHP V + LL V+ G LTD +GR DFRN ++++T Sbjct: 616 TPGYLTSAVRRQPFCVVLLDEVEKAHPAVHDALLGVLGEGRLTDASGRFTDFRNALIILT 675 Query: 605 TNAGVRETERKSIGLIHQDNSTDA-------MEEIKKIFTPEFRNRLDNIIWFDHLSTDV 657 +N G +T R +G + D + E+++ F PE NR+D+++ F LS + Sbjct: 676 SNLGA-DTLRARVGFDASGGAPDMASLRAHYLSEVQRFFRPEMFNRMDDVVVFSPLSAPL 734 Query: 658 IHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 + ++V + + + + L LEV+ A++WLA +G+D GARP+ R ++ L P Sbjct: 735 LRRLVVRELEAVCRRPGLSLHDALLEVTPAAQDWLALRGFDARYGARPLKRALERELVVP 794 Query: 716 LANELLFGSLVDGGQVTVALDKEKNEL 742 +A+ L + +TV EL Sbjct: 795 VADWLAAHPRMGPANLTVDAGTTGLEL 821 >UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TPV1_CITRO Length = 835 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 165/466 (35%), Positives = 242/466 (51%), Gaps = 26/466 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREA--LEACSVDLVALRQELE 59 LN +L A R+R H F+ EHLLLALL + A L+ + + ALR E+ Sbjct: 10 LNPVCLYALEQAAGRSRAQGHWFVEPEHLLLALLDDEHCDLACCLDGAGIPVDALRDEIR 69 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 Q + R + +L+ A+ +V A Sbjct: 70 RAQSQFR-----TGCTRMPVFSAQLVELLEGALLLTTFRQLKQVRSA------LLLLTLL 118 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDE-----PTQSSDPGSQPNSEEQAGGEERMENFTT 174 LR L ++ IS +D + + +++ G+ ++ +T Sbjct: 119 TRDRLRAQLAQGLPLLLKISAEQLEDHWLNWCRGSAEAVSDRSDADAAVRGDSVLDQYTH 178 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +L + AR G IDP+IGR+ E+ + I +L RRR+NNP+LVG GVGKTA+AEGLA RI +G Sbjct: 179 DLTREARQGRIDPIIGRDAEIRQCIDILLRRRQNNPILVGAPGVGKTAVAEGLALRIAEG 238 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGA 293 VP + D + SLD+G L AG +G+FE+R K +++ +++ +LFIDE HT+IGA Sbjct: 239 SVPPPLRDVALLSLDLGLLQAGAGVKGEFEQRLKGVIEAVKKSSQPIVLFIDEAHTLIGA 298 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G A GG DAANL+KP L+ G++R I +TT+QE+ FEKD AL RRFQ+I I EP + Sbjct: 299 GGAEGGS-DAANLLKPALARGELRTIAATTWQEYKKYFEKDPALDRRFQRIHIEEPDEDS 357 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA---- 409 V ++ + K EAHH V+ A+R AV L+ +YI+ R LPDKAI V+D A +R Sbjct: 358 AVMMLRAVADKLEAHHGVQILDTAIREAVRLSQRYISGRQLPDKAISVLDTACSRVALAQ 417 Query: 410 RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 +P + + +A IE R+ E V D L +L + Sbjct: 418 HDIPPALEEVRQQLATIEEESVRL--NRELLVGIDHHDRLCDLEAQ 461 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 8/310 (2%) Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 E A V V+ A + +V+ IP + + L+ L +R+ V GQ Sbjct: 521 ETAAVQLRDEVPLVPDCVDAATVAAVIGGWTGIPIGQMLTDEAHALRTLVERMSERVMGQ 580 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFD 520 A+E + ++ R+GL KPVG FL GPTGVGKTE L+ AL L+ + Sbjct: 581 RAALETIARRLRAYRSGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLITIN 640 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 +SEY E HTVS+L GAPPGYVG+ GG LT+AV + P++V+LLDEIEKAHPDV V Sbjct: 641 LSEYQEAHTVSQLKGAPPGYVGYGSGGALTEAVRRRPYSVVLLDEIEKAHPDVLEAFYNV 700 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRET-ERKSIGLIHQDNSTDAMEEIKKIFTPE 639 D G + D G DF+N V++ T+N G E + + +T EE+ + F P Sbjct: 701 FDKGVMEDGTGLIVDFKNTVMLATSNVGAELILETPTSEFNSEWFNTAMREELLRHFRPA 760 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNWLAEKGYDRA 698 F R+ + + L + + +V + +L + L G L + + ++ + Sbjct: 761 FLARMTTVAY-RALDEETLKGIVLAKLEKLAQRYLVATGEKLNMEDGLVERVMDQC--KG 817 Query: 699 MGARPMARVI 708 +GAR + ++ Sbjct: 818 VGARDIENLV 827 >UniRef50_Q1DC82 ClpA/B family protein n=2 Tax=Cystobacterineae RepID=Q1DC82_MYXXD Length = 966 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 153/569 (26%), Positives = 255/569 (44%), Gaps = 23/569 (4%) Query: 174 TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +L LAR G + G + + + +L R K+ PLL GE GVGK+A+ + +A RI + Sbjct: 41 RDLTALAREGKLPAAHGVDAAVTEVLGLLTRGGKH-PLLAGEPGVGKSALVQEVARRIAE 99 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 G V +A+ + + + ++LA + R + F+ LL L + I++I ++ +G Sbjct: 100 GRVDAELANARVVEVSVANILARSTQR-QAAESFEELLAYLSRHPRPIVYIRDLPAALG- 157 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 A + L +G +R I T + + D ALA R + + EP E+ Sbjct: 158 -------GPLAPVAVRGLRTGGLRFIFETEPKRVQELLRSDEALAERLHLLPLHEPPTEK 210 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 ++ + + E + A A+ L+ K++ + +P KAI+++ E Sbjct: 211 ARWVLGRVAEELERELRLPIDPAACDLALRLSSKFLLAQRMPRKAIELLKETA----AEA 266 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 S K V D+ + R+P V + L + GQ A+ A+ + Sbjct: 267 ASAAKDHVGPEDVLTRFCAATRLPRFVVDDAMPLDLDETERFFGERLLGQTDAVGAVLRS 326 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTV 530 + + +AGL +P+G FLFAGPTGVGKT++ L++ L L+R +M++Y Sbjct: 327 VALLKAGLNDPRRPLGVFLFAGPTGVGKTQLAKLLAEYLFGSADRLVRLNMADYPNDGDE 386 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 S GA + G L+ + VLLLDE EKA V + LQ+ D GT + Sbjct: 387 SVPFGATWAPALETRRGELSALLDGKVFTVLLLDEFEKAARSVHDRFLQLFDEGTFVNGA 446 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKK----IFTPEFRNRLDN 646 G N ++V T+N G +G + + + E+ + F PEF NR D Sbjct: 447 GETVSCNNTLIVATSNVGAEVYRESGMGFTGARRAEEMVPEVDRRIGEAFRPEFLNRFDA 506 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 I F LS I ++ + + + + + + + +EV+ + L E+GY GAR + Sbjct: 507 ICHFRPLSKVDIRKIAQREVGRVLEREGIRARALDVEVTPAVVDLLVERGYSPQFGARYL 566 Query: 705 ARVIQDNLKKPLANELLFGSLVDGGQVTV 733 R I+ L LA E+ L G V V Sbjct: 567 QREIEKTLTAALAVEIARRPLPPGTPVRV 595 >UniRef50_Q8NPQ1 ATPases with chaperone activity, ATP-binding subunit n=1 Tax=Corynebacterium glutamicum RepID=Q8NPQ1_CORGL Length = 655 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 167/598 (27%), Positives = 281/598 (46%), Gaps = 53/598 (8%) Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 + Q E +LN+ + +P + R+ +++ + +L + K N LLVG +G G Sbjct: 69 QPQQQSAPNDETRFIDLNERHKDD--EPALFRDDVIDQTLAILISKNKPNALLVGPAGTG 126 Query: 220 KTAIAEGLAWRIVQGDV--PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD 277 K+ IAE +A R+ DV P+ + I + I L+AG G E+R L+K Sbjct: 127 KSRIAEDIARRLANDDVSIPDQLVGHRILDVSIAELVAGAGVVGQLEERILDLIKYATDP 186 Query: 278 TN-SILFIDEIHTIIGAGAA-SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDR 335 +N I+FIDEIH I G ++ SG Q A ++KP L+ G +RVIG+TT QE + F+ D Sbjct: 187 SNKVIIFIDEIHQIAGDQSSHSGSQAKVAQILKPYLARGDLRVIGATTTQE-ARDFDHDP 245 Query: 336 ALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD--VRYTAKAVRAAVELAVKYINDR- 392 AL RRF ++++ E ++T+ I++ + Y H + V + + + ++ Sbjct: 246 ALKRRFSRVNVDEFDRDQTLTILHAARDGYLKHFNNAVTVSDDVLGYVYTYSQQFNPGNT 305 Query: 393 HLPDKAIDVIDEAGARARL------------MPVSKRKKTVNVADIESVVARIARIPEKS 440 PD A+ + D+A A + + ++ + +A +++P Sbjct: 306 AQPDAALTLFDKALASLTMEKQRLINNHVIAPSLKFPVSERHIHNTARKLAFGSQVPASI 365 Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 + RD L+ L FGQD IE + AIK + G+ KP+ S++FAG +GVG Sbjct: 366 NTDDARDKLETL--------FGQDHIIEPVLTAIKREQLGIFPRTKPL-SWVFAGSSGVG 416 Query: 501 KTEVTVQLSKAL-GIELLRFDMSEYMERHTVSRLIGAPPGYVGF-DQGGLLTDAVIKHPH 558 KTE+ LS+A+ G + + + EY+ +++ LIG+ GY+G + D +I +P Sbjct: 417 KTEMARILSRAINGGDPIIINGPEYISPESITGLIGSSDGYIGSNSKRAKPLDPLISNPR 476 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG 618 V++LDE EK+HP + + +D GT+ NG +F +++ TTNA + R S G Sbjct: 477 QVIVLDEFEKSHPHFQQLFMAALDTGTMAMANGTTLNFSQAIIIATTNAARDKIGRDSFG 536 Query: 619 LIHQD----------NSTDAMEEIK----KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 + A E +K K F E NR NI F+ + +++D Sbjct: 537 FDSDNSGVLGSAQAATDPRAQERLKSLMSKDFPVELLNRFQNIFAFNRIDAGTYREILDN 596 Query: 665 FIVE------LQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPL 716 L + ++ + + L E + GARP AR I+D++ L Sbjct: 597 LYQRRRDAVLLSHPHYAAQIPADIDSDTLDQLVETTFISDFGARPAARTIEDHIASLL 654 >UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=Bacteria RepID=B7H4I2_ACIB3 Length = 893 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 153/475 (32%), Positives = 246/475 (51%), Gaps = 25/475 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP---SAREALEACSVDLVALRQEL 58 L+ +L + ++ + +EHL L LL+ P + L+ + AL +L Sbjct: 12 LSTAARTALEKSANACVLQQNYEIEIEHLFLELLNQPLENDLKILLKKYKISADALADDL 71 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + I Q R S R+ ++A + + ++LVA+ + + Sbjct: 72 KETISQLPK-----GNTRTPIFAKSIVRLFEQAWLLASAEQNPVIRSGHLLVALLTAPDL 126 Query: 119 Q-----AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAG-------GE 166 A+ L + + F+ + E + S SQ + EQA Sbjct: 127 YQIATRASSLFDLFPIDSMK-HKFLEICEKSVEQQEESKTSSQADELEQAATPTAKTQKT 185 Query: 167 ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 ++ +T NL + A+ GGIDP+IGRE E+ + +L RRR+NNP+L GE GVGKTA+ EG Sbjct: 186 PALDQYTINLTEKAKNGGIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGVGKTAVVEG 245 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFID 285 LA +I QG VPE + + ++ LD+G L AG +G+FE R K ++++++ ILFID Sbjct: 246 LALKIAQGLVPEALKNVHLHVLDMGLLQAGASVKGEFENRLKQVIQEVQSSAHPIILFID 305 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 E HT+IGAG + GQ DAANL+KP L+ G++R I +TT+ E+ FEKD AL+RRFQ + Sbjct: 306 EAHTLIGAGGQA-GQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQVVK 364 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 + EP+ E V ++ + P + H +++ +A+ AV + +YI+ R LPDKA+ V+D A Sbjct: 365 VEEPTEEVAVDMLRAMIPVMQKHFNLQIDDEAIVTAVHASHRYISGRQLPDKAVSVLDTA 424 Query: 406 GARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQ--SDRDTLKNLGDRLKM 458 AR L ++ K + E + +I E Q + L+NL ++L+ Sbjct: 425 AARVALTQNAQPVKLDQLKAQEHNLKLEQQILENEHRQIPIHHERLENLKNQLES 479 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 120/397 (30%), Positives = 199/397 (50%), Gaps = 12/397 (3%) Query: 366 EAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVAD 425 E + + VR EL + ++ I++I + A + + VN Sbjct: 486 ETQEQWQKELELVRKIQELEAQSHSNESEAYDQINLIRKDLADIQGQQ-PLVFERVNSQI 544 Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I +++ IP + + + L D+L V GQD A+ L + IK ++A L + Sbjct: 545 INEIISDWTGIPVGKMVNDEIKQILTLEDKLGERVMGQDYALTQLVQGIKTSKAKLEDPN 604 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVG 542 KP G FL GP+GVGKTE + L+ L L+ +MSEY E HTVS L GAPPGYVG Sbjct: 605 KPQGVFLLVGPSGVGKTETALALANELYGGEQHLITINMSEYQEAHTVSSLKGAPPGYVG 664 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + QGG+LT+AV ++P++V+LLDEIEKAH DV + QV D GTL D GR DF+N ++ Sbjct: 665 YGQGGVLTEAVRRNPYSVVLLDEIEKAHSDVQELFYQVFDKGTLEDGEGRVIDFKNTTIL 724 Query: 603 MTTNAGVRETERKSIGLIHQD--NSTDAMEEIK----KIFTPEFRNRLDNIIWFDHLSTD 656 +T+N G + + ++ + D +E +K K F P F R+ + +F L D Sbjct: 725 LTSNTGSSAIMQACLNQPVEEWPTAEDLIEHLKPSLYKQFKPAFLGRMRIVPYF-PLHDD 783 Query: 657 VIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 ++ +++ + ++ +++++ G ++ S + L + + GAR + ++ + Sbjct: 784 LLVRIIKHKLGKITARIEKQYGTEVQYSDDLVELLLSRCTEVDSGARNVDNILNSTVLPA 843 Query: 716 LANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKH 752 LA E+L + +D + +E+ Y K Sbjct: 844 LATEILVALADQKLPKLIMIDAKDDEIQYLLDPVAKP 880 >UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=Moritella sp. PE36 RepID=A6FFT5_9GAMM Length = 865 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 160/490 (32%), Positives = 245/490 (50%), Gaps = 22/490 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 LNQ + +L A + +EH LL L+ N + +D+ L EL Sbjct: 13 LNQNGKKALEGAAGLCHSRSQFTVEIEHWLLQLVENKQDDIAIICQLQGIDVQVLINELN 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 +E+ A+ TL Q L + ++ +L + S+ Sbjct: 73 LSLERQKTGNSAAPSLSPHIITLLRQSWLNTTIEF----DEQQIRSGIILYTLLSDDSIN 128 Query: 120 AAYLLRKHEVSRL--DVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 A + RL +++ + Q+ ++ FT +L Sbjct: 129 AMLSRHIRQFERLSANLIRDNWSIITEKSAEQNGIVAVSNAGVATNSKTPSLDQFTVDLT 188 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 + AR G +DP++GR+ E+ + + +L RRR+NNP+L GE+GVGKTA+ EGLA RIV DVP Sbjct: 189 EKARNGKMDPILGRDPEIRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLAQRIVAKDVP 248 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAA 296 E + + LD+ L AG +G+FE R KA+L +++Q T ILFIDE HT+IGAG A Sbjct: 249 ESLQHVQLRELDLALLQAGAGMKGEFENRLKAVLNEVKQSATPIILFIDEAHTMIGAGGA 308 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 + GQ DAAN++KP L+ G++R I +TT+ E+ FEKD AL RRFQ + I EPS+ V Sbjct: 309 A-GQNDAANILKPALARGELRTIAATTWAEYKKYFEKDPALTRRFQVVKIEEPSVPTAVI 367 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 ++ G+ P E HHDV TA A++AAV L+ +YIN R LPDKA+ ++D A AR + + Sbjct: 368 MLRGILPVMEQHHDVVITADALQAAVALSKRYINGRQLPDKAVALLDSACARVAISQAAT 427 Query: 417 RKKTVNVAD-IESVVARIARIPEKSVS-QSDRDTLKNLGDRL----KMLVFG------QD 464 ++ + A I + + +S + D + L L LV Q Sbjct: 428 PGLVEDLQRKKAQLEAEIKLLEREQLSGEDHGDVIIALQSDLVGVEDNLVVELQAWKTQS 487 Query: 465 KAIEALTEAI 474 + ++A+ + I Sbjct: 488 ELVQAIQQQI 497 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 109/349 (31%), Positives = 177/349 (50%), Gaps = 11/349 (3%) Query: 407 ARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKA 466 A + V+ I V++ IP ++Q + +T+ NL +K V GQD A Sbjct: 518 AELHEAKNTMVYWQVDEQVICEVISDWTGIPLGKMAQDELETVLNLSAEMKTRVIGQDHA 577 Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSE 523 I+ + ++++RA L E KP G F+ GP+GVGKTE + L++ + ++ +MSE Sbjct: 578 IDLIARTVQISRAQLSDESKPNGIFMLTGPSGVGKTETALTLAEQVYGSEENIITINMSE 637 Query: 524 YMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDN 583 Y E H VS L+G+PPGYVGF +GG+LT+AV ++P++V+LLDEI+KA P V +I Q+ D Sbjct: 638 YKEEHKVSLLLGSPPGYVGFGEGGVLTEAVRRNPYSVVLLDEIDKAAPGVQDIFYQIFDK 697 Query: 584 GTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKK----IFTPE 639 G + D GR DF+N +++MT+N G + IK F P Sbjct: 698 GCVKDGEGRDIDFKNTIIIMTSNVGTDTITALFADPDTAPELDSLADCIKGDLMAAFKPA 757 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQEARNWLAEKGYDRA 698 F R NII F L+ D++ + I L ++ + V E + + +D A Sbjct: 758 FLGRA-NIIPFVPLTDDMLSTIAQLQINRLAARIRRNHNAEFIVDNEVITQIVSRCHDVA 816 Query: 699 MGARPMARVIQDNLKKPLANELLFG--SLVDGGQVTVALDKEKNELTYG 745 GAR + +Q+ L ++ ++L + Q+ V +++ +T Sbjct: 817 SGARTIHNYLQNTLLPEISVQVLQAMTQQTEFSQINVTTNEDNFIITLN 865 >UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1U8_9BACT Length = 829 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 161/464 (34%), Positives = 255/464 (54%), Gaps = 25/464 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 +QE A A H +T HL LA+L + + L VDL++ ++L Sbjct: 6 FSQEALRVFAEAKNIAIRCDHAEITDLHLSLAILRQKESEIKYRLLEAGVDLLSYERKLT 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ A+ + + R++ + ++S V ++ +AI ++ES Sbjct: 66 EALQD----RRATPGVSKLYYSRQYHRIVLVSGEISRASFDAYVRTPHLYLAILRDRESP 121 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 +A + + V+ V + ++ T S + G P EQ + F N + Sbjct: 122 SAAIAAEFGVTVESVQSMLAA-----RLTASDELGISPEQMEQ------LNRFGRNFLKE 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP++GR++E+ +VL RR KNNP+L+GE+GVGKTA+AEG+A RI + D P + Sbjct: 171 AREGLMDPVLGRDEEINECFRVLSRRLKNNPVLIGEAGVGKTAVAEGIAQRIAKQDAPAL 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASG 298 + ++SLD+ +L+AGTKYRGDFE+R K +L+ ++ ILF+DE+HTIIGAG+ S Sbjct: 231 LRGRMVFSLDMAALVAGTKYRGDFEERLKEILEIIKASKGRIILFVDELHTIIGAGSGS- 289 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +D +N++KP L+ G+I +IG+TT +E+ E DRAL RRFQKI I EPS E + ++ Sbjct: 290 GSMDTSNILKPFLARGEILMIGATTVEEYRRYIEPDRALERRFQKILIEEPSEEAALSML 349 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 G+ KYE HH VR A+ AA++L+ +YI DR+LPDKAID+IDEAGA R+ S Sbjct: 350 RGVVSKYETHHRVRIADGALIAAIQLSKRYITDRYLPDKAIDLIDEAGAMVRM---SMDS 406 Query: 419 KTVNVADIESVVARIARIPEKSVSQSD---RDTLKNLGDRLKML 459 + + + + + ++D + + L +L Sbjct: 407 MPQELDEWNRRIIQWEMEHILLLDEADPAAQRRRQTLEKQLADE 450 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 171/781 (21%), Positives = 313/781 (40%), Gaps = 131/781 (16%) Query: 23 EFMTVEHLLLALLSNPSA--REALEACSVDLVALRQEL---------------------- 58 ++ HL LA+L + + V + +++ L Sbjct: 103 AYVRTPHLYLAILRDRESPSAAIAAEFGVTVESVQSMLAARLTASDELGISPEQMEQLNR 162 Query: 59 --EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVF----HVQSSGRNEVTGANVLVAI 112 F+++ L RD + F RVL R + + +G + A + Sbjct: 163 FGRNFLKEAREGLMDPVLGRDEEINECF-RVLSRRLKNNPVLIGEAGVGKTAVAEGIAQR 221 Query: 113 FSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENF 172 ++Q++ A LLR V LD+ ++ + + + + + ++ Sbjct: 222 IAKQDAPA--LLRGRMVFSLDMAALVAGTKYRGDFEERLKEILEIIKASKGRIILFVDEL 279 Query: 173 TTNLNQLARVGGID------PLIGREK----------ELERAIQ---VLCRRRKNNPLLV 213 T + + G +D P + R + E R I+ L RR + +L+ Sbjct: 280 HTIIGAGSGSGSMDTSNILKPFLARGEILMIGATTVEEYRRYIEPDRALERRFQK--ILI 337 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 E E A +++G V + + D G+L+A + K + Sbjct: 338 EEPS-------EEAALSMLRGVVSKYETHHRVRIAD-GALIAAI-------QLSKRYITD 382 Query: 274 LEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIF-- 331 +I IDE AGA +D+ + I+ E +I Sbjct: 383 RYLPDKAIDLIDE------AGAMVRMSMDSMPQELDEWNRRIIQ-------WEMEHILLL 429 Query: 332 -EKDRALARRFQKIDITEPSIEET-----------VQIINGLKPKYEAHHDVRYTAKAVR 379 E D A RR Q ++ V+ ++ L E +VR + + + Sbjct: 430 DEADPAAQRRRQTLEKQLADERARYEERFAAWQKEVERLDELSRLKELRDEVRRSLEDAQ 489 Query: 380 A--AVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 V+ +++ +R D I I+ G P + V +I+ +VA A IP Sbjct: 490 EAHRVDDVKRFVAERQAFDAKIAEIERIG------PHYPVSREVTEEEIKRIVAVRAGIP 543 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 S+ +S+ + L+ G L G A+ A+ ++I AR+GL +PVGSFL GP+ Sbjct: 544 LSSIGRSESEKLEQAGKSLLAEFVGHRDAVSAVRQSILRARSGLMKRRRPVGSFLLVGPS 603 Query: 498 GVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 G GK+ + +K + L F+M E+ ++ +V++LIGAPPGYVG D G LT+AV Sbjct: 604 GTGKSYLAELFAKHYYEDERSPLSFNMREFTDKASVNKLIGAPPGYVGHDAAGALTEAVR 663 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 PH+V++ + ++ A +V +++ ++ +G + DN GR DFRN +L T + R+ Sbjct: 664 LRPHSVIVFESVDHAGAEVLSLIARLAADGEIADNRGRTVDFRNALLFFTVTSTDRDPPV 723 Query: 615 KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD 674 + + R+ LD + +F+ S +++ + ELQ +L+ Sbjct: 724 REL----------------------LRDGLDGVYYFEDFSLRERRELLTLRLRELQRELE 761 Query: 675 QKGVSLEVSQEARNWLAEKGYDR-AMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 ++ + L + + + G+DR GA P+A ++ + LA + L G L G +V + Sbjct: 762 EEQIELSWDEATLDAVTA-GFDRAESGAHPVAGYMERTVLADLAAKKLLGRLRPGARVVI 820 Query: 734 A 734 Sbjct: 821 R 821 >UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteobacteria RepID=A6VUK5_MARMS Length = 873 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 155/466 (33%), Positives = 246/466 (52%), Gaps = 13/466 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSV-DLVAL-RQELE 59 LN + +L+L A A E +H +++EH L LL NP + C + D V L + +++ Sbjct: 13 LNSQSKLALEQAAALCIERQHHEVSIEHFLSVLLENPMSD----VCVIFDHVKLGKDDIQ 68 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 A I ++ P + P L + + + + + E+ +L+A + Sbjct: 69 AAISKSYPRSTTLDTYPPFSP-LLVELMQEAWLLSSTELNQTELRSGAILLASLIHPDRY 127 Query: 120 AAY----LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 ++ L K + + + SD + S A G + F TN Sbjct: 128 YSFEMIGLFEKINKEAIRKNFDLVLERSSESDHVVSDSQDKSTSSSVAAGNSALGKFCTN 187 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 + A+ +DP++ RE EL + +LCRRRKNNP++VGE+GVGK+A+ EGLA RIV G+ Sbjct: 188 VTLQAKNDELDPVLCREDELNLMVDILCRRRKNNPIVVGEAGVGKSAVVEGLALRIVAGN 247 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAG 294 VP+ +A+ I+SLD+G L AG +G+FEKR K ++ +++ ILFIDE HT+IG+G Sbjct: 248 VPDKLANVEIHSLDLGLLQAGASIKGEFEKRLKGIIDEIKSSPVPIILFIDEAHTLIGSG 307 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 GG DAANL+KP L+ G++ I +TT++E+ FEKD AL RRFQ + + EPS+ ++ Sbjct: 308 NQEGGS-DAANLLKPALARGELSTIAATTWKEYKKYFEKDPALTRRFQLVKVEEPSVSQS 366 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV 414 V I+ GL YE H V A++A+ EL+ +Y++ R LPDKAIDV+D A AR + Sbjct: 367 VDIMRGLHHVYEKAHGVLIHDDALKASSELSARYLSGRQLPDKAIDVLDTACARIAINIS 426 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 + K + + R + ++ L +++ V Sbjct: 427 TPPKVLGQLENQCCTRQREIDMLKRQALIGQPVDNDYLESLIELEV 472 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 110/367 (29%), Positives = 179/367 (48%), Gaps = 13/367 (3%) Query: 391 DRHLPDKAIDVIDEAGARARLMPVSKRKKT------VNVADIESVVARIARIPEKSVSQS 444 D L D +D + E A + VN I V++ +P ++ Sbjct: 510 DEALSDDELDELREQLAASYQELEQIPHHERLMYPEVNAQQIAEVISDWTGVPIDQMNSD 569 Query: 445 DRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEV 504 + + +L + L + GQD AIE + + +RA L +P G+FL GP+GVGKTE Sbjct: 570 ELHKITHLPEILNAKIKGQDVAIECVHRHLLTSRADLRRPGRPKGAFLLVGPSGVGKTET 629 Query: 505 TVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVL 561 +QL++ L L +MSEY E+HTVSRLIG+PPGYVGF +GG+LT+A+ K P++V+ Sbjct: 630 VIQLAEELYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVGFGEGGVLTEAIRKKPYSVV 689 Query: 562 LLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH 621 LLDE+EKAHP+V N+ Q D G L D GR D +N++ +T+N G + Sbjct: 690 LLDEVEKAHPEVLNLFYQAFDKGELADGEGRLIDCQNILFFLTSNLGYQTIVDNV--ETP 747 Query: 622 QDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKG-VSL 680 ++ E+ F P R+ I+ + L+ DV+ ++V + L+ L ++ + Sbjct: 748 KEIEAKLYPELVPFFKPALLARM-EIVPYLPLNKDVLEKIVLGKLSSLEKLLRKRYSAEV 806 Query: 681 EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 E+ + + GAR + +I+ + P++ LL + + E+ Sbjct: 807 EIDPALVQEILNRATRSENGARMLEAIIEGQVLPPISLALLNRLAEQQPVSRIFMTIEEG 866 Query: 741 ELTYGFQ 747 E + Sbjct: 867 EFVGEIE 873 Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 78/226 (34%), Gaps = 31/226 (13%) Query: 205 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL--DIGSLLAGTKYRGD 262 R K LLVG SGVGKT LA + G + + Y + L+ Sbjct: 611 RPKGAFLLVGPSGVGKTETVIQLAEELYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVG 670 Query: 263 FEKRFKALLKQLEQDTNSILFIDEI-----------HTIIGAGAASGGQ---VDAANLIK 308 F + L + + + S++ +DE+ + G + G+ +D N++ Sbjct: 671 FGEG-GVLTEAIRKKPYSVVLLDEVEKAHPEVLNLFYQAFDKGELADGEGRLIDCQNILF 729 Query: 309 PLLSSGKIRVIGST--TYQEFSNIFEKD------RALARRFQKIDITEPSIEETVQIING 360 L S+ + I T +E + AL R + + + + +I+ G Sbjct: 730 FLTSNLGYQTIVDNVETPKEIEAKLYPELVPFFKPALLARMEIVPYLPLNKDVLEKIVLG 789 Query: 361 LKPKYEA------HHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 E +V V+ + A + N + + I+ Sbjct: 790 KLSSLEKLLRKRYSAEVEIDPALVQEILNRATRSENGARMLEAIIE 835 >UniRef50_A6G5U6 AAA ATPase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5U6_9DELT Length = 742 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 186/729 (25%), Positives = 310/729 (42%), Gaps = 64/729 (8%) Query: 31 LLALLS--NPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVL 88 LLA++ + A +AL D+V LR+ L + + R S Sbjct: 53 LLAIVRSADCHAYQALRLAGADMVRLRKLLIERVRERGRERATRGPVRGRSHPGSPSSSS 112 Query: 89 QRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV----SRLDVVNFISHGTRK 144 + + S A+ S + +H + + Sbjct: 113 PVRMSSTRRS-----------AALSSRPAPPSPRQSHQHGAPYPAQPEPAPSQREPMALR 161 Query: 145 DEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCR 204 + + S+ + P E R + L + G + PL+GRE+EL L R Sbjct: 162 PDASASTLAKATPAPEVHERSAPRTQKGPAELRSIHP-GSLPPLVGRERELATLADALLR 220 Query: 205 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 R PLLVGE G G+T +A LA + D P + Y D L G+ Sbjct: 221 RGPRPPLLVGEHGSGRTCVATHLARVL---DRPVFRLEAPHYDEDDNLL-------GE-- 268 Query: 265 KRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS----GKIRVIG 320 +L + ++ D++ + D + P L+ G+ R++ Sbjct: 269 ------DLELIAEAQGVVVFDDLDRV---------SSDQPPAMLPALARAWATGQPRILT 313 Query: 321 STTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA-VR 379 +++ + + + + ++ + Q + P H + A + Sbjct: 314 VVSHESRARLEAWMPGILDTLDVLPLSALEGGDVHQAVKLAAPAVLEQHGLGLDNDAHLH 373 Query: 380 AAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEK 439 +A +++ +P +A+D++D + AR + + +V ++V +P Sbjct: 374 ELTRIAERFLTGLAMPGRALDLLDLSCAR----TTREGRASVGRDTWLTIVCERTGLPRS 429 Query: 440 SVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGV 499 V S L +L L V G + +EAL ++ RAG +P+ S L GP+GV Sbjct: 430 RVEGSSERDLLDLDAVLARQVVGHEHVLEALASLVRRNRAGFSS-GRPIASVLLLGPSGV 488 Query: 500 GKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKH 556 GKTE+ L+ AL LLR DMSEY E H V+R++GAPPGYVG +QGG LTD ++++ Sbjct: 489 GKTEIAKALASALYERDDALLRLDMSEYAEAHAVARVVGAPPGYVGHEQGGALTDPLLRN 548 Query: 557 PHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKS 616 PH V+LLDEIEK+H DV +LLQV D G LTD GR DFR+ V++MT+N G Sbjct: 549 PHRVVLLDEIEKSHRDVHQLLLQVFDEGRLTDGRGRTIDFRHAVVIMTSNLGAELMFDLD 608 Query: 617 IGLIHQD----NSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ 672 +G + + ++ + F E NR++ + L+ + + + + I + Sbjct: 609 LGPNGDGDALPDDAEVLDRARSHFPVELWNRIEAPLVLRPLTREQMLAISRRLIASSSKR 668 Query: 673 L-DQKGVSLEVSQEARNWLAEK-GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ 730 L +G+ V E L E+ G D A+GARP+ +I ++ +A+E+L G + G + Sbjct: 669 LTRDRGIRYRVEDEVLERLIERAGIDPALGARPLRHLIGREVESLVADEILRGRVRAGEE 728 Query: 731 VTVALDKEK 739 V V D+ Sbjct: 729 VVVRFDERG 737 >UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mutans RepID=CLPB_STRMU Length = 860 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 164/460 (35%), Positives = 258/460 (56%), Gaps = 14/460 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSVDLVALRQELEA 60 + Q +E SL A A HR+ + + HL L+ + A + ++ ++ L + + Sbjct: 5 MTQLVEDSLEEAKELAIAHRNYQLDIPHLWAVLVKPDQFAFQFYQSLEINTNQLIEIINK 64 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 I++ + + + + +L A + +T ++++A+F++Q + Sbjct: 65 EIDKIPVLSSTEKSSYARLYSQRLKNLLDDAHQEMIDLKDQVLTVEHLILALFNQQRNPI 124 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 L + +++ + + H RK +P SS Q + +E + NLNQ A Sbjct: 125 TVFLLEQGLNKEKLYQKM-HRIRKGKPAISS---------SQETIYDALEKYAVNLNQRA 174 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 ++ +IGR+ E+ I++L R+ KNN +LVG SGVGKTAI EG R+V+ VP+ + Sbjct: 175 LDEPVNKIIGRQDEMNDIIRILSRKNKNNAVLVGHSGVGKTAIIEGFVQRLVKNQVPKNL 234 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTIIGAGAASGG 299 IYSLDIG+LLAGTKYRG+FE+RFKALL ++ + ILFIDEIH+I+ AG G Sbjct: 235 QGKVIYSLDIGALLAGTKYRGEFEERFKALLNDIIDSNGQIILFIDEIHSIVSAGRTE-G 293 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 VDAA+++KPLL+ GKIR+IGSTT+ E+ E DRAL RRFQ+I + EP ++ T++I+ Sbjct: 294 SVDAASILKPLLARGKIRIIGSTTHAEYRESIEYDRALERRFQRILVHEPDLDYTMEILK 353 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLKP YE H VR + AA L+ +YI+DR LPDKA+D+IDEA A RL + + Sbjct: 354 GLKPIYENFHGVRLEEDGLEAAASLSKRYISDRFLPDKALDLIDEACAAKRLASHAYPVQ 413 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 N++ + + +I + D+ L N ++L+ Sbjct: 414 MTNLSQ-QLISEKIRLLRLTDSDTDDKFKLNNHLEQLEEQ 452 Score = 327 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 149/395 (37%), Positives = 228/395 (57%), Gaps = 14/395 (3%) Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + E ++ V V L + I H A++ + RL Sbjct: 473 LRSHLTALEEQANLALENNQVADYVRLEDEEIRKCHQKMTALE-------KERLDSQKII 525 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 TV DI +VV R+ I + V +++RD L +L + L + GQD+A++ +++AI + Sbjct: 526 NVTVTREDIAAVVERLTGIKVQGVMENERDRLLHLEELLHQKIVGQDQAVQKVSQAIIRS 585 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLI 534 RAG+ + +P+GSFLF GPTGVGKT + +L++ L E++R DMSEYME+H VSRL+ Sbjct: 586 RAGIQNPKRPIGSFLFLGPTGVGKTALAKRLAEVLFGSELEMVRLDMSEYMEKHAVSRLV 645 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 G PPGYVG+++GG LT+AV + ++++LLDEIEKAHPDVFN LLQV+D G LTD+ GR Sbjct: 646 GPPPGYVGYEEGGQLTEAVRQRLYSIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTI 705 Query: 595 DFRNVVLVMTTNAGVRETERK--SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDH 652 DF+N +L+MT+N G + G I + ++E+ F PEF NR+D + F+ Sbjct: 706 DFKNTILIMTSNIGSTNILQSLQDSGCITSEVRYKVLDELNHSFRPEFLNRIDETVLFNA 765 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 LS + VV + +LQ +L ++ + L +++ LA++G+D A GARPM R I L Sbjct: 766 LSEKDMTGVVKVMVSDLQARLLEQDIHLTLTESVYILLAKEGFDAAFGARPMQRTIMQKL 825 Query: 713 KKPLANELLFGSLVDGGQ--VTVALDKEKNELTYG 745 + PLA L+ + VTV++ +K + T+ Sbjct: 826 ENPLALYLIQNQKNKEKETFVTVSVKDKKLKFTFS 860 >UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=HS104_YEAST Length = 908 Score = 365 bits (937), Expect = 4e-99, Method: Composition-based stats. Identities = 149/425 (35%), Positives = 236/425 (55%), Gaps = 25/425 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS------AREALEACSVDLVALR 55 + L +A A +H+H + H+L A + P + +E D + Sbjct: 7 FTERALTILTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDYDLFK 66 Query: 56 QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE 115 + + + + PA E P+ + +VLQ A + + + ++L A+F+ Sbjct: 67 KVVNRNLVRIPQQQPAPAE---ITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFN- 122 Query: 116 QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 +S + ++ +V D+ T+ G+ N+ E + + + Sbjct: 123 -DSSIQQIFKEAQV---DIEAIKQQALELRGNTRIDSRGADTNTP-----LEYLSKYAID 173 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 + + AR G +DP+IGRE+E+ I+VL RR K+NP L+GE G+GKTAI EG+A RI+ D Sbjct: 174 MTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDD 233 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEIHTIIGAG 294 VP ++ ++SLD+ +L AG KY+GDFE+RFK +LK++E+ I LFIDEIH ++G G Sbjct: 234 VPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNG 293 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 DAAN++KP LS G+++VIG+TT E+ +I EKD A RRFQKI++ EPS+ +T Sbjct: 294 KD-----DAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQT 348 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV 414 V I+ GL+PKYE HH VR A+ A +LA +Y+ R LPD A+D++D + A + Sbjct: 349 VAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARD 408 Query: 415 SKRKK 419 SK ++ Sbjct: 409 SKPEE 413 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 192/817 (23%), Positives = 350/817 (42%), Gaps = 98/817 (11%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALR-QELEAF 61 + L L A ++ + F+ +H+L AL ++ S ++ + VD+ A++ Q LE Sbjct: 89 SYALGKVLQDAAKIQKQQKDSFIAQDHILFALFNDSSIQQIFKEAQVDIEAIKQQALELR 148 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQS--SGRNEVTGANVLVAIFSEQESQ 119 A + + ++A GR E + + V + + Sbjct: 149 GNTRIDSRGADTNTPLEYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNP 208 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 L+ + + + ++ ++ D+ + + A + + + Sbjct: 209 C--LIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAGA--KYKGDFEER 264 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP-- 237 G + + +E + I + +L+G GK A L + +G + Sbjct: 265 -FKGVLKEI----EESKTLIVLFIDEIH---MLMGN---GKDDAANILKPALSRGQLKVI 313 Query: 238 ---EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL-LKQLEQDTNSILFID-----EIH 288 +I D G FE+RF+ + + + + EIH Sbjct: 314 GATTNNEYRSIVEKD-----------GAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIH 362 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKI---------RVIGSTTYQEFSNIFEKDRALAR 339 G V AA L K L ++ S E D R Sbjct: 363 --HGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKPEELDSK-ER 419 Query: 340 RFQKIDIT----------EPSIEETVQIING-----------LKPKY--EAHHDVRYT-- 374 + Q I + + + ++ +++ L+ +Y E H T Sbjct: 420 QLQLIQVEIKALERDEDADSTTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEELTQA 479 Query: 375 ----AKAVRAAVELAVKY-------INDRHLPD--KAIDVIDEAGAR--ARLMPVSKRKK 419 + A++ +Y + +PD K I+ +++ A R S + Sbjct: 480 KKKLDELENKALDAERRYDTATAADLRYFAIPDIKKQIEKLEDQVAEEERRAGANSMIQN 539 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 V+ I AR+ IP K +S+S+ + L ++ L V GQ AI+A++ A++++R+ Sbjct: 540 VVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRS 599 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGA 536 GL + +P SFLF G +G GKTE+ +++ L + ++R D SE E++ VS+L+G Sbjct: 600 GLANPRQP-ASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGT 658 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 GYVG+D+GG LT+ + P++VLL DE+EKAHPDV ++LQ++D+G +T G+ D Sbjct: 659 TAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDC 718 Query: 597 RNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 N +++MT+N G + I + M +++ F PEF NR+ +I+ F+ LS Sbjct: 719 SNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRK 778 Query: 657 VIHQVVDKFIVELQVQLDQ--KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 IH++VD + E++ + +Q K L ++QEA+++LA+ GY MGARP+ R+IQ+ + Sbjct: 779 AIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILN 838 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 LA +L + D V V L K K+ + A++ Sbjct: 839 KLALRILKNEIKDKETVNVVLKKGKSRDENVPEEAEE 875 >UniRef50_Q2SB15 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SB15_HAHCH Length = 1101 Score = 364 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 146/574 (25%), Positives = 248/574 (43%), Gaps = 28/574 (4%) Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS 247 + G + ++ + L + + L+VG SG GKTA+ R G V ++ + Sbjct: 202 VFGLDAYVDTLNRNLLGEFRQSVLVVGPSGCGKTALINEFVKRHFTG----VNSNKIPWR 257 Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLI 307 +L +G + +++ + I+++ + + G G V A + Sbjct: 258 TTAAQMLQALTQQGGWRHALGLWVREARTNGE-IIYLGNLSELFEVGQYQGNSVSIAEAL 316 Query: 308 KPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEA 367 + LS ++ +I T ++ + I + ++ F + TE EE QI Sbjct: 317 RDPLSRNEVTLIAEVTEEQLAAIDLRAPGYSQLFHIVRFTERGEEEENQIARQAIQAQAD 376 Query: 368 HHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIE 427 ++R A+ + L +Y P K I + AR + + A E Sbjct: 377 LFNIRIAPNAIERIILLQRRYAPYSGYPGKIIRFFENMILAARKDNGAISENEAISASCE 436 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 + +P V R + + + + GQ +A+EAL AI +AGL KP Sbjct: 437 E-----SGMPRFLVDHQARLDADKVREHFRRRIVGQTQAVEALVRAIITVKAGLAPRGKP 491 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 + S LF GPTGVGKTE+ L++ + + LLRFDMSEY + ++V+RL Sbjct: 492 IASLLFVGPTGVGKTEMAKTLAQFMFGDEKRLLRFDMSEYSDPYSVTRLTATG------- 544 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 L V + P +VLL DEIEKA P +++LLQV+ G LTD++G A+F + +++MT Sbjct: 545 -EASLVTKVRQQPFSVLLFDEIEKADPAFYDLLLQVLGEGRLTDDHGESANFCSALIIMT 603 Query: 605 TNAGVRETERKSIGLIHQDNSTDAMEEI-----KKIFTPEFRNRLDNIIWFDHLSTDVIH 659 +N G ++ + S+G +D + A + K F PE NR+D + F L+ Sbjct: 604 SNLGAQQFMQNSVGFSTEDKTDAAAQRHFEQTAAKYFRPELFNRIDQVAPFFALTQAEQM 663 Query: 660 QVVDKFIVELQ--VQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 V+ K + LQ L + VSL + L D GAR + R+++ ++ LA Sbjct: 664 IVLQKEMRRLQGAAGLSNRQVSLNFEDPVWSHLNNLPSDPRYGARSVQRLLRKHVTAHLA 723 Query: 718 NELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 L D ++T + + +K Sbjct: 724 PALSARPHEDPLEITATVSADALSFDARVTHQEK 757 >UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ClpB n=5 Tax=Proteobacteria RepID=Q2T6Y8_BURTA Length = 958 Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 165/502 (32%), Positives = 243/502 (48%), Gaps = 32/502 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL--EACSVDLVALRQELE 59 LN +L A RH+ + VEHLL L PSA AL A D LR++ + Sbjct: 13 LNPYCRTALENAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRASGADAARLRRQAD 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSE--- 115 A ++ PA R S +LQ A G ++ A VL A + Sbjct: 73 AALD----ARPAGGGGRPA-FAPSLLALLQDAWLIASLELGETQIRSAAVLAAAVARAAR 127 Query: 116 QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQS-----SDPGSQPNSEEQAGGEERME 170 Q S+ + + R +V +H + ++ + PG ++ + Sbjct: 128 QPSRGGDDML-QSLRRDALVARFAHACAQSIESRGPGARDAAPGDANDTPGAHDASSAIA 186 Query: 171 NFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWR 230 + + AR G IDP+ GR+ ++ + + +L RRRKNNP+ VGE GVGKTA+ EGLA R Sbjct: 187 RYCEDFTAKARAGRIDPVFGRDAQIRQIVDILARRRKNNPVCVGEPGVGKTAVVEGLALR 246 Query: 231 IVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHT 289 I +GDVP + T+ LD+G L AG +G+FE+R K ++ ++ +LF+DE HT Sbjct: 247 IAEGDVPAALRHATLLGLDLGLLQAGASVKGEFEQRLKRVIAEIHASQAPVVLFVDEAHT 306 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 +IGAG +G DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ + + P Sbjct: 307 LIGAGGPAGAS-DAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDSP 365 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 + +V I+ GLK +Y+ H V A+ AA EL+ +YI R LPDKAID++D A AR Sbjct: 366 DVATSVMILRGLKERYQDAHGVTIRDDALVAAAELSERYITGRQLPDKAIDLLDTACARV 425 Query: 410 RLMPVSKRKKTVNVADIESVVARIA-------------RIPEKSVSQSDRDTLKNLGDRL 456 ++ +K + + R P + + L D L Sbjct: 426 KVRQQTKPAALEDAERAIQALERERRALRRDLAERCAPDTPRVADIDRELAALSARADAL 485 Query: 457 KMLVFGQDKAIEALTEAIKMAR 478 Q A +AL EA + R Sbjct: 486 SEAWAAQRDAAQALVEARRACR 507 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 105/328 (32%), Positives = 171/328 (52%), Gaps = 10/328 (3%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ I VVA I + + + + L D LK + GQD AIE ++EA+K AG Sbjct: 575 VDPEAIADVVADWTGIAAGKLRRDRANVMLRLADTLKGRIRGQDHAIEQISEAVKAGAAG 634 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAP 537 + +P+G FL AGP+G GKTE + ++ AL + ++ +MSE+ ERH VSRLIG+P Sbjct: 635 VHDPRRPLGVFLLAGPSGTGKTETALAVADALFGDERSIVVVNMSEFQERHDVSRLIGSP 694 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ +GG+LT+AV + P++V+LLDE+EKAHPDV N+ QV D G+L D G++ DF Sbjct: 695 PGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAHPDVLNLFYQVFDKGSLCDGEGKEVDFA 754 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDN---STDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 N V+ +T+N G + D + + F P R+ I + L+ Sbjct: 755 NTVIFLTSNLGADVIADLAARGGRPDPDAMRAAIRPALSRHFKPALLARMTEIPYA-TLA 813 Query: 655 TDVIHQVVDKFIVELQVQLDQKG-VSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 D + + + + + ++ + + + +A + + GAR + ++Q ++ Sbjct: 814 PDTLADIARRKLERIAARVAAQHATRVVYDEAVVAHVAARCTEVESGARSVDFILQRHVL 873 Query: 714 KPLANELL--FGSLVDGGQVTVALDKEK 739 LA +L G + +A+D Sbjct: 874 PALAQHVLVCAGDATPMAAIRIAIDANG 901 >UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B6EJJ8_ALISL Length = 872 Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats. Identities = 156/471 (33%), Positives = 248/471 (52%), Gaps = 29/471 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 L ++ SL A + H + EH + LL P+ ++A+E + E Sbjct: 13 LTPGMKASLEAAAGECVQRGHFSIEFEHWFVQLLQQPTVGWQKAVEQTGM-------ASE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRV-LQRAVFHVQSSGRNEVTGANVLVAIFSEQE- 117 + +EQ L + D+ P+LS Q V L + + + S +++ V I +Q Sbjct: 66 SILEQLNNHLSSLPRGNDSAPSLSPQLVELLKDAWMIGSLNHAQLSMNEFHVLIVLKQRI 125 Query: 118 ---------SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER 168 S L ++R + S + G + N Sbjct: 126 EQGAYNGALSTWIKSLSSEWLNRQSITKTASSHLSSTSMLCGKNQGMEGNM-----STPA 180 Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ ++ NL Q AR G +DP+ GR E+ +AI +LCRRR+N+P+LVG+ GVGKTAI EGLA Sbjct: 181 LDKYSQNLTQAARNGDLDPISGRGNEIRKAIDILCRRRQNSPILVGDPGVGKTAIVEGLA 240 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEI 287 +IV G+VP + + + +LD+ L AG +G+FE R K ++ +++Q T I+FIDE Sbjct: 241 QQIVDGNVPPALKNVELRNLDLSLLQAGASIKGEFENRLKDVINEIKQSATPIIVFIDEA 300 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT+IGAG A+ GQ DAAN++KP L+ G+ R I +TT+ E+ FE D AL+RRFQ + I Sbjct: 301 HTLIGAGGAA-GQNDAANILKPALARGEFRSIAATTWAEYKQYFESDAALSRRFQVVSIG 359 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS + + +++G+K E HH+V+ +A+ AAV L+++Y+ +R LPDKAI ++D A + Sbjct: 360 EPSEGDAIHMLSGVKTCLEKHHNVKVMQEAINAAVSLSIRYLPERKLPDKAISLLDTACS 419 Query: 408 RARLMPVSKRKKTVNVADIESVVAR--IARIPEKSVSQSDRDTLKNLGDRL 456 R L + ++ VA+ V E ++ D D L+ + RL Sbjct: 420 RIGLSQSAPPRQLEAVAEQICYVENEITTLNHEAALWSIDDDRLEQVQQRL 470 Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 117/415 (28%), Positives = 196/415 (47%), Gaps = 18/415 (4%) Query: 350 SIEETVQIINGLKPKYEAHHDV--------RYTAKAVRAAVELAVKYINDRHL---PDKA 398 + Q+ L E H ++ + + +L +++N L DK Sbjct: 459 DDDRLEQVQQRLIDLQEQHQEIGKCWEQEKTLVEEIIVLQTKLDEQFLNGDDLSENEDKF 518 Query: 399 IDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 + I A VN I V++ IP ++ + + + L +L + Sbjct: 519 LLAIKMTELHAIQDDQPLVLPQVNEQTIAEVISLWTGIPVGNMLKEEVEHLMHLEKHIGE 578 Query: 459 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---E 515 V GQ I +++AI+M+RAGL KPVG FL GP+GVGKTE + L+ L Sbjct: 579 RVIGQIAPIAEISKAIRMSRAGLTDLRKPVGVFLMCGPSGVGKTETALALTDLLYGGKRN 638 Query: 516 LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFN 575 + +M+E+ E H VS L+G+P GYVG+ +GG+LT+AV K+P++VLLLDE+EKAHP V + Sbjct: 639 ITTINMTEFKEEHKVSTLLGSPAGYVGYGKGGVLTEAVRKNPYSVLLLDEMEKAHPGVHD 698 Query: 576 ILLQVMDNGTLTDNNGRKADFRNVVLVMTTN-AGVRETERKSIGLIHQDNSTDAM-EEIK 633 I Q+ D G+++D+ GR+ DFRN +++MT+N A + G T A+ E++ Sbjct: 699 IFYQIFDKGSISDSEGREVDFRNTIIIMTSNAADSAVVNGCADGRPSISILTKAIFPELQ 758 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAE 692 F P F R + +F L+ + + ++ + ++ ++ Q + + + L Sbjct: 759 NFFKPAFLGRTTIVPYF-PLNDEEMSKIAQLSLRRIEKRIKQHYNATFDYDTQVIELLVS 817 Query: 693 KGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 GAR + ++I L LAN+ + V L N+ + Sbjct: 818 MNQSPETGARAIEQLINRQLMPELANQCIVRMSQSQPISEVLLTVNGNKFQIDIK 872 >UniRef50_C6HYE9 ATPase AAA-2 domain protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYE9_9BACT Length = 890 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 155/499 (31%), Positives = 243/499 (48%), Gaps = 25/499 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 ++ L ++ H +T EH++++LL +P + + L A +D ++R+E+ Sbjct: 13 MSPILTRAVEQGAGLCLSRSHYEITPEHVVISLLDHPDSDVMKILAAEGIDGGSVRREMS 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ S + VLQ A + T + V + F + S Sbjct: 73 NALDDLR-----SGNGGRPVFSPLLIEVLQDAHLIASINRNEPHTRSGVFLQAFVNRLSA 127 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + + R+ + + G Q + E + + F + + Sbjct: 128 YSSGRPSKSLERIGKERLKDQFDTLASGSAEAIGGGQESQEGPSEEGTAIGRFCEDFTEK 187 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G IDP+ GR+ E+ + I +L RRRKNNP+ VG+ GVGKTA+ E LA RIV+GDVPE Sbjct: 188 ARKGKIDPVFGRDAEVRQIIDILSRRRKNNPICVGDPGVGKTAVVESLALRIVEGDVPES 247 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGAASG 298 ++ + LD+G+L AG +G+FE R K ++ +++ + ILFIDE HT+IGA + Sbjct: 248 LSKVRLLGLDMGALEAGAGVKGEFENRLKGVINEIKASSVPVILFIDEAHTLIGA-GGAQ 306 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ + + EPS+E + I+ Sbjct: 307 GGGDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQPVKLDEPSVETAILIL 366 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK YEA H V A+ AA L+ +Y+ R LPDKA+D++D + AR R+ SK + Sbjct: 367 RGLKAHYEAVHHVTIRDDALVAAATLSDRYLTGRKLPDKAVDLLDTSAARIRISQSSKPE 426 Query: 419 KTVNVADIESVVARI-----------ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 K + + R IP + + R+ L L L Q + Sbjct: 427 KIEGLERRIQALEREKNGLVRDQTFGQDIPAERLDAIGRE-LGTLEQELSR----QRERW 481 Query: 468 EALTEAIKMARAGLGHEHK 486 E A+ A + Sbjct: 482 EKEKTAVAELLAHREDPRR 500 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 126/458 (27%), Positives = 214/458 (46%), Gaps = 25/458 (5%) Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI----DITEPSIEETVQII 358 A +L+ + IR+ S+ ++ + + +AL R + + E + I Sbjct: 406 AVDLLDTSAAR--IRISQSSKPEKIEGLERRIQALEREKNGLVRDQTFGQDIPAERLDAI 463 Query: 359 NGLKPKYEAH---HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID----EAGARARL 411 E R+ + A LA + R PD+ + + EA R Sbjct: 464 GRELGTLEQELSRQRERWEKEKTAVAELLAHREDPRREGPDRESWMKELRTKEAAVRKIQ 523 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 V+ + VV+ IP + + T+ L + L V GQ+ A+ + Sbjct: 524 EDHPMIHFEVDPETVARVVSNWTGIPLGKLLREQAQTVMRLQETLGERVLGQEPALARVG 583 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERH 528 E I+ +RAG ++PVG FL GP+GVGKTE + ++ L + + +MSE+ E+H Sbjct: 584 EIIRNSRAGFKAPNQPVGIFLLVGPSGVGKTETALAVADILFGDEKATVTLNMSEFQEKH 643 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 SRLIG+PPGYVG+ +GGLLT+AV + P++V+LLDE+EKAHPD+ N+ QV D G L+D Sbjct: 644 QASRLIGSPPGYVGYGEGGLLTEAVRQRPYSVVLLDEVEKAHPDILNMFYQVFDKGVLSD 703 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSI---GLIHQDNSTDAMEEIKKIFTPEFRNRLD 645 G++ DF N V+ +T+N + ++ ++D T ++ + F P R+ Sbjct: 704 GEGKEIDFSNTVIFLTSNLASEKLSAYALEHPEASYEDLVTLIRPDLSRHFKPALLARMT 763 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 I+ + L + + ++V L GV + + +A + GAR + Sbjct: 764 -IVPYLPLRGEALGRIVRLKTKRLSRSFVQNNGVEIVFEDSLIDHVALQCETSEAGARNI 822 Query: 705 ARVIQDNLKKPLANELLFGSLVDG---GQVTVALDKEK 739 ++Q + ++ EL+ G LV+G G V V + + Sbjct: 823 DYLLQSRILPEISRELI-GRLVEGTLDGPVRVGIAPDG 859 >UniRef50_Q2SB14 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SB14_HAHCH Length = 1093 Score = 361 bits (927), Expect = 5e-98, Method: Composition-based stats. Identities = 170/715 (23%), Positives = 307/715 (42%), Gaps = 39/715 (5%) Query: 26 TVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQ 85 +VEHLL L P R L + ++ E P L++Q Sbjct: 60 SVEHLLW-LCFQPDYRFELIHLR--FKSGMHLVDGLF--AVAQYQVREHRYLCLPKLNYQ 114 Query: 86 RVLQRAVFHVQSSGRNEVTG--ANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTR 143 +L + + G + + ES L + + + Sbjct: 115 TLLIPDDVETRPQLIEFLAGRIGVYIRSQRKADESFDIKRLYSQAGDSATTIGVSVNVEQ 174 Query: 144 KDEPTQSSDPG--SQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQV 201 D P + S S ++ + G ++ +L Q ++ + RE E + Sbjct: 175 SDFPFEQSAASLFSFFSASREFSGAYELKKTAEDLAQFYPDD-LEGSLHRESETVWLERA 233 Query: 202 LCRRRKNNPLLVGESGVGKTAIA-EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYR 260 L + ++VG GVGK+ + LA + DV ++ LD ++AG Sbjct: 234 LFSGKPQPVVIVGAPGVGKSNLIQHTLAQYMANSDVKAPERLQKLWLLDPLRVIAGMSVV 293 Query: 261 GDFEKRFKALLKQLEQD--------TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS 312 G++E+RF+A+L +++ T +L+ID + G +S + ++++KP L Sbjct: 294 GEWERRFEAILSWVKKRLQETYGIRTPDVLYIDNPVALFRIGKSSQTSLTLSHVLKPYLE 353 Query: 313 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVR 372 +I ++ T E+ I + DR A FQ + + E+ QI + ++E ++ Sbjct: 354 RREIGLVLEATPYEWRRIQQLDRGFADLFQVLRLEPLPAEKLSQIYVRRRAQWEREYNCE 413 Query: 373 YTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVAR 432 ++A+ + L + D LP + V+ + + + + + + Sbjct: 414 IASQALLTLLGLEPGFRGDSALPGSVLSVLRDIAVKHQG-------RRADEQAVYEAFQT 466 Query: 433 IARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFL 492 + + ++ + + + GQ +A + LT+ + +A L KP+ + L Sbjct: 467 NFHFRKTLIDKNATLQENEVRRFFEQRLVGQPQAQDVLTDTVMTIKAQLTPLGKPLNTLL 526 Query: 493 FAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 F GPTGVGKTE L++ L L+R D++E+++ V RLIG G QGGLL Sbjct: 527 FIGPTGVGKTEAAKLLTQRLFNNSDCLVRIDLNEFVDAGAVHRLIGD-----GMGQGGLL 581 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGV 609 T+ V VLLLDEIEKAHP V ++LLQ++D+G LTD G+ DF V++MT+N G Sbjct: 582 TERVRYQKACVLLLDEIEKAHPKVHDLLLQLLDDGRLTDAMGKTTDFTQTVVIMTSNIGA 641 Query: 610 RETERKSIGLIH--QDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 +E + G H DN+ + +++ F PE NR+++I+ F+ L + ++ + Sbjct: 642 KEAASR-FGFSHHSDDNAATYRKSVEQFFRPEMINRINDIVVFNPLQHSDMQRLAQLHMQ 700 Query: 668 ELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 L + ++ L + N LA+ +D +GAR + R ++ + A L Sbjct: 701 RLLERDGFIRRSTILNIDPACLNRLADASFDPLLGARALKRNLERVITHLTAQRL 755 >UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=Gammaproteobacteria RepID=Q88IA4_PSEPK Length = 878 Score = 361 bits (927), Expect = 6e-98, Method: Composition-based stats. Identities = 153/428 (35%), Positives = 234/428 (54%), Gaps = 18/428 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 LN+ + A A H + VEHLLL LL N + L V L+ +L Sbjct: 23 LNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVVAERLQAQLV 82 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQES 118 + R + R++++A G +V A++L A+ + E Sbjct: 83 TALGTFKK-----GNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLDDAEL 137 Query: 119 QAAYLLRKHEVS-------RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGE-ERME 170 + + E+ RL++ + + + + P + ++ +A G+ ++ Sbjct: 138 RRVVIASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVSTSSKASGKTPALD 197 Query: 171 NFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWR 230 +T NL Q AR G IDP++GRE E+ + + +L RRR+NNP+L GE+GVGKTA+ EGLA R Sbjct: 198 QYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLALR 257 Query: 231 IVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHT 289 I QGDVP V+ D +++LD+G L AG +G+FE R KA+++++++ ILFIDE HT Sbjct: 258 IAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFIDEAHT 317 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 +IG+G + GQ DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ + + EP Sbjct: 318 LIGSGGQA-GQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEP 376 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 ++ + ++ GL K HH V +A+ AV L+ +YI R LPDKA+ V+D A AR Sbjct: 377 DEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTACARI 436 Query: 410 RLMPVSKR 417 L S Sbjct: 437 ALAQSSLP 444 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 105/318 (33%), Positives = 168/318 (52%), Gaps = 9/318 (2%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 V+ I V++ IP + + + DT++ L L V GQD A+ + + IK++ Sbjct: 541 HALVDSGAIAQVISGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIGKRIKIS 600 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLI 534 RA + +KP+G FL GP+GVGKTE + L+ L L+ +MSEY E HTVS L Sbjct: 601 RARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHTVSSLK 660 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 G+PPGYVG+ +GG+LT+AV + P++V+LLDE+EKAHPDV + QV D G L D GR+ Sbjct: 661 GSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREI 720 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIH----QDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 +FRN V+++T+N G + + + D +++ +F P F RL +I+ F Sbjct: 721 NFRNTVIILTSNTGTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFLGRL-SIVPF 779 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 + ++ ++V + + + + L Q +A + + GAR + ++ Sbjct: 780 YPVQDQILERIVALKLERIAKRFARNHQAELSYDQALVKAIAARCTEVDSGARNIDNILS 839 Query: 710 DNLKKPLANELLFGSLVD 727 L LA +L D Sbjct: 840 QTLMPELAQRVLERMAQD 857 >UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989 RepID=B7LFQ0_ECO55 Length = 849 Score = 361 bits (927), Expect = 6e-98, Method: Composition-based stats. Identities = 152/476 (31%), Positives = 244/476 (51%), Gaps = 22/476 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L E +L+ A A H + HLL LL A E + + +E Sbjct: 12 LTPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSLFNPEWVLNAIE 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHV-QSSGRNEVTGANVLVAIFSEQES 118 + + + V +S + S Q +L++ H + + L + + ++S Sbjct: 72 SELIRINTVPQSS-----PVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTMINFRDS 126 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 + +DV + + +S + E + +T NL+ Sbjct: 127 IFPLNVSDALCCDMDVAEELLISFSDEAEHSAS------HRPTDRSSHEYLSKYTENLSL 180 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A G +DP+ GREKE+ + I +L RRR+NNP+L GE GVGK++I EGLA +I G VP+ Sbjct: 181 RAETGKLDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPD 240 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAAS 297 V+ + I++LD+G+LLAG RG+FE R K+LL +L D +ILFIDE H++IGAG Sbjct: 241 VLKNVRIHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGL- 299 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 GQ DAANL+KP L+ G++R+I +TT+ E+ FEKD ALARRFQ + + EP+ + T ++ Sbjct: 300 PGQTDAANLLKPALARGELRIIAATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEM 359 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + L P E HH+V +A+ A V L+ +Y++ R PDK++ ++D A +R VS+ Sbjct: 360 LRSLLPMMEKHHNVSIREEAITATVHLSDRYLHGRRQPDKSVSLLDTACSRV---AVSQS 416 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 + D+E+ + R ++Q D L+ + L + ++ +E L A Sbjct: 417 TSPDAIQDVEASLVRYQGE-LALLTQERSDVLRQ--EMLANKIAQLEEELEQLKSA 469 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 111/406 (27%), Positives = 184/406 (45%), Gaps = 14/406 (3%) Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 E S +++ + E ++ A R EL K + + K + + A Sbjct: 442 ERSDVLRQEMLANKIAQLEE--ELEQLKSAWRHQSELVAKIQSSDDISSKNMYRKELESA 499 Query: 408 RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 + P + V+ + VV+ +P ++ L L+ V GQ A+ Sbjct: 500 YKKDSP--MVFECVDKNCVADVVSGWTGVPLGVCLDGEQQKASGLLRCLEQRVLGQRYAM 557 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEY 524 A+ + + RA L KP G FL AGP+G GKTE L++ + +L+ +M+E+ Sbjct: 558 SAIASQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALAEFVYGDENKLITINMTEF 617 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 E HTVS L GAPPGYVGF QGG LT+ V +P++V+LLDEIEKAHPDV Q+ D+G Sbjct: 618 QEAHTVSTLKGAPPGYVGFGQGGTLTERVSHNPYSVILLDEIEKAHPDVLEFFFQIFDSG 677 Query: 585 TLTDNNGRKADFRNVVLVMTTNAGVRETER-KSIGLIHQDNSTDAMEEI-KKIFTPEFRN 642 + D G+ FR+ +++MT+N + G ++D + + + + F F Sbjct: 678 IIEDAEGKMVSFRDCLIIMTSNFASENITNIWNDGETNRDRIKEMLLPLFNEHFGAAFMG 737 Query: 643 RLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ---KGVSLEVSQEARNWLAEKGYDRAM 699 R N+I F L + + +V I ++ + +Q + +E + +W+ Sbjct: 738 R-TNLIPFTPLHSKTLRDIVLIKIDKICQRFEQASGQMYKIEYNDSLIDWITHHCQCDKS 796 Query: 700 GARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 GAR + V+ + LA L + + + KN +T Sbjct: 797 GARDIDSVLNSTVLPVLARYLTDSEDNRTPK-KIRISVRKNNITLR 841 >UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ClpB n=51 Tax=Proteobacteria RepID=Q3JL54_BURP1 Length = 1042 Score = 360 bits (925), Expect = 8e-98, Method: Composition-based stats. Identities = 157/440 (35%), Positives = 222/440 (50%), Gaps = 15/440 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL--EACSVDLVALRQELE 59 LN +L A RH+ + VEHLL L PSA AL AC D LR++ + Sbjct: 13 LNPYCRNALESAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRACGADAARLRRQAD 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFS---- 114 A ++ PA + R S +LQ A G + A VL A + Sbjct: 73 AALD----ARPAGDGGRPA-FAPSLLALLQDAWLIASLELGDTHIRSAAVLAAAVARAAR 127 Query: 115 EQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQA-GGEERMENFT 173 + +L+ L R E S + P + + Sbjct: 128 QPSPGGDDVLQSLRKDALVARFASGACARSIESRASGALDAAPGEASDTRDASSAIARYC 187 Query: 174 TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 + AR GGIDP+ GR+ E+ + + +L RRRKNNP+ VGE GVGKTA+ EGLA RI + Sbjct: 188 EDFTAKARAGGIDPVFGRDAEIRQIVDILARRRKNNPVCVGEPGVGKTAVVEGLALRIAE 247 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIG 292 GDVP + T+ LD+G L AG +G+FE+R K ++ ++ T +LFIDE HT+IG Sbjct: 248 GDVPATLRGATLLGLDLGMLQAGASVKGEFEQRLKRVIAEIRASQTPVVLFIDEAHTLIG 307 Query: 293 AGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIE 352 A + G DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ + + P + Sbjct: 308 A-GGAAGASDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDSPDVA 366 Query: 353 ETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM 412 +V I+ GLK +Y+ H V A+ AA EL+ +YI R LPDKAID++D A AR ++ Sbjct: 367 TSVMILRGLKERYQDAHGVTIRDDALVAAAELSARYITGRQLPDKAIDLLDTACARVKVR 426 Query: 413 PVSKRKKTVNVADIESVVAR 432 +K + + R Sbjct: 427 QQTKPAALEDAQRAIQALER 446 Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 105/328 (32%), Positives = 171/328 (52%), Gaps = 10/328 (3%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ I VVA I + + + + L D L+ + GQD AIE ++EA+K AG Sbjct: 623 VDPDAIADVVADWTGIAAGKLRRDRANVMLRLADTLRRRIRGQDHAIEQISEAVKAGAAG 682 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAP 537 + +P+G FL AGP+G GKTE + ++ AL + ++ +MSE+ ERH VSRLIG+P Sbjct: 683 VHDPRRPLGVFLLAGPSGTGKTETALAVADALFGDERSIVVVNMSEFQERHDVSRLIGSP 742 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+ +GG+LT+AV + P++V+LLDE+EKAHPDV N+ QV D G+L+D G++ DF Sbjct: 743 PGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAHPDVLNLFYQVFDKGSLSDGEGKEVDFA 802 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDN---STDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 N V+ +T+N G + D + + F P R+ I + L+ Sbjct: 803 NTVIFLTSNLGADIIADIAARGARPDPDAMRAAVRPALSRHFKPALLARMTEIPYA-PLA 861 Query: 655 TDVIHQVVDKFIVELQVQLDQKG-VSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 D + + + + ++ + + +A + + GAR + ++Q ++ Sbjct: 862 PDTLADIARLKLERIATRVAAQHATRIVYDDAVVAHVAARCTEVESGARNVDFILQRHVL 921 Query: 714 KPLANELL--FGSLVDGGQVTVALDKEK 739 LA +L G+ + VA+D Sbjct: 922 PALAQHVLVCAGNAAPMPAIRVAIDAGG 949 >UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding subunit n=15 Tax=Gammaproteobacteria RepID=A7JYI1_VIBSE Length = 892 Score = 360 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 151/460 (32%), Positives = 230/460 (50%), Gaps = 16/460 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 L+ +++L A A A + + +EH LL+LL N L LRQ + Sbjct: 13 LHPIAKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDVLLSHFDCSENLLRQSVR 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + ++ + + L + + + + ++ +L+ + S Sbjct: 73 STLDTSAK----GNGSKPVFSALLIEWLQESWLVSSLDLSETQIRSGALLLTLVSNPLRY 128 Query: 120 AAYLLRK--HEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 + V+ + + T + Q + + + FTT+ Sbjct: 129 GQHGYASTLEAVNPDSLKRNFAELTSQSIEAQV----ATSEKTQAREDGSALSKFTTDFT 184 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 AR G IDP+ R++E+ + + +L RRRKNNP+ VGE GVGKTA+ EGLA +IVQGDVP Sbjct: 185 GKARKGEIDPVFCRDQEIRQIVDILARRRKNNPIAVGEPGVGKTAVVEGLALKIVQGDVP 244 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAA 296 + + +Y LD+G L AG +G+FEKR A+L +++ T ILFIDE HT++G G Sbjct: 245 DNLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQ 304 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 +GG DAANL+KP L+ G+++ I +TT+ E+ FEKD ALARRFQ + + EPS E+ Sbjct: 305 AGGS-DAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSPEQAAL 363 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 II GL+P YE H+V A+ AA L+ +YI+ R LPDKAIDV+D A AR + + Sbjct: 364 IIRGLRPAYEKSHNVYVRDDAITAAAALSARYISGRQLPDKAIDVLDTACARVNISLNAI 423 Query: 417 RKKTVNVADIESVVARIARIPEKSVSQSDRDT--LKNLGD 454 + + R E+ Q D L N+ D Sbjct: 424 PASVETLQQELAAQQRELEALERDALQQTGDKHSLANIPD 463 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 135/477 (28%), Positives = 222/477 (46%), Gaps = 52/477 (10%) Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSN-----IFEKDR-----ALARRF 341 A +G + AN+ + + TT +E + EK++ AL R Sbjct: 447 DALQQTGDKHSLANI-------PDLELAMETTKEELAEQEAQWHKEKEQIQEMIALRSRL 499 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 ++ E + EE V + E DV + ++A+ + Sbjct: 500 HELVFGETNEEELVA-----EEDSEQEQDVS-----------------PYAEMDEEAVRI 537 Query: 402 IDEAGAR---ARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 A A V ++ V++ IP + Q + +T L + L Sbjct: 538 AISACQEQLDAIRNGNPLVHFEVGPDEVSHVISDWTGIPMGKMLQDEAETTLKLKESLTQ 597 Query: 459 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE--- 515 + GQ+ AI+AL+E I+ A+AGLG+ P G FL GP+GVGKTE ++ + Sbjct: 598 SIKGQEYAIDALSEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTETARSIADQMFGGERF 657 Query: 516 LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFN 575 + +MSE+ E+HTVSRLIG+PPGYVG+ +GG+LT+AV + P++V+LLDE+EKA P+V N Sbjct: 658 MTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLN 717 Query: 576 ILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER---KSIGLIHQDNSTDAMEEI 632 + QV D GTL D GR DF+N +++MT+N E E +S + + + Sbjct: 718 LFYQVFDKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQSKDIDANIIAEAIRPTL 777 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD-QKGVSLEVSQEARNWLA 691 + F P R+ +++ F LS + + +++ + ++ +L +SL + ++ Sbjct: 778 NQHFKPALLARM-SVLPFVPLSDEAMTEIIHHKLNKVSQRLQSHHKLSLSYEESLVEFVL 836 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ-VTVALDKEKNELTYGFQ 747 GAR + VI L L+ +LL D + V++D E+ LTY F Sbjct: 837 GNCRLAETGARNIDAVINRQLLPQLSTQLLVHDKDDSHTQIEVSVD-EQGTLTYAFS 892 >UniRef50_C7RF24 ATPase AAA-2 domain protein n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RF24_ANAPD Length = 834 Score = 360 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 153/451 (33%), Positives = 257/451 (56%), Gaps = 18/451 (3%) Query: 8 LSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQT 65 +++ A A ++++ +T HLL ++ + LE SVD L E+ I + Sbjct: 11 MAIKEARNLALLNKNQEVTDLHLLKSVTDQENHVLDTMLEEFSVDKDNLTDEITKAIGK- 69 Query: 66 TPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLR 125 L +++ + +QR L A + + ++T +++ +A F +++ + ++L Sbjct: 70 ---LRSNDGLSKLYFSRDYQRTLLLAKENAKKRYAEKITTSHLFLAFFDLEKTTSKHILE 126 Query: 126 KHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGI 185 K +S ++ + ++ E ++ + ++ + +L + A+ G I Sbjct: 127 KVGLSHEKCEQYLVNKEKEVENSE----------RFSEKIGDLIDKYGIDLTKRAKEGKI 176 Query: 186 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTI 245 DP+IG + E++R ++L RR KNNP+L+GE GVGK+A+ EGLA +I QGDV + + D I Sbjct: 177 DPVIGMDYEVDRLSEILTRRIKNNPILIGEPGVGKSAVVEGLALKIAQGDVVDFLKDKII 236 Query: 246 YSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQVDAA 304 +SL++ S+LAGT RG+FE R K L+ + + ILFIDEIHTI+GAG++SGG +D + Sbjct: 237 FSLNVSSVLAGTGLRGEFESRVKDLMDIVTSFEGKIILFIDEIHTIVGAGSSSGG-IDIS 295 Query: 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPK 364 N+IKP LS G+I +IG+TT E+ + EKD AL RRFQKI I E SIEE+ I+ G+K Sbjct: 296 NIIKPKLSRGEITIIGATTVAEYRSHIEKDGALERRFQKILIKEASIEESYDILRGIKTN 355 Query: 365 YEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA 424 YE H++ T +A++A V+L+ +YI DR LPDKAID++DEA + + + ++ Sbjct: 356 YENFHNLIITDEAIKACVDLSDRYITDRKLPDKAIDLMDEAASMLKNKLENTPDSLDDLR 415 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 + + ++ ++ D LK L D+ Sbjct: 416 EDILELEESLQLKADDKKENKLDELKKLYDK 446 Score = 295 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 175/788 (22%), Positives = 333/788 (42%), Gaps = 78/788 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQEL- 58 +++ + +L +A A++ E +T HL LA L +++ LE + Q L Sbjct: 81 FSRDYQRTLLLAKENAKKRYAEKITTSHLFLAFFDLEKTTSKHILEKVGLSHEKCEQYLV 140 Query: 59 --EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQ 116 E +E + + D +R + + V + +L Sbjct: 141 NKEKEVENSERFSEKIGDLIDKYGIDLTKRAKEGKIDPVIGMDYEVDRLSEILTRRIKNN 200 Query: 117 ES---------QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEE 167 A ++++ DVV+F+ S G+ E ++ ++ Sbjct: 201 PILIGEPGVGKSAVVEGLALKIAQGDVVDFLKDKIIFSLNVSSVLAGTGLRGEFESRVKD 260 Query: 168 RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESG--------VG 219 M+ T+ G I I E+ + + + + +G Sbjct: 261 LMDIVTS------FEGKIILFI---DEIHTIVGAGSSSGGIDISNIIKPKLSRGEITIIG 311 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN 279 T +AE ++ D I + + RG + ++ + D Sbjct: 312 ATTVAEY--RSHIEKDGALERRFQKILIKEASIEESYDILRG-IKTNYENFHNLIITDEA 368 Query: 280 SILFIDEIHTIIGAGAASGGQVD----AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDR 335 +D I +D AA+++K L T ++ E Sbjct: 369 IKACVDLSDRYITDRKLPDKAIDLMDEAASMLKNKL---------ENTPDSLDDLREDIL 419 Query: 336 ALARRFQKIDIT---EPSIEETVQI----INGLKPKYEAHHDVRYTAKAVRAAVELAVKY 388 L Q + E ++E ++ + + + E D+R +R V + + Sbjct: 420 ELEESLQ-LKADDKKENKLDELKKLYDKDLEIKQEETEDLRDLRRIRSDIRELVFIKKRL 478 Query: 389 INDRHLPD-------KAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSV 441 +N+ + K ++ E + + + + + I+++++RI +IP + + Sbjct: 479 LNEDKFEEYTKITKVKLPELKKEEKSYLNKKYEFVKIEKLEESHIKTLISRITKIPVEDL 538 Query: 442 SQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGK 501 +Q ++ + N+ L V GQ +A+E ++ AI G+ + HKP+G+FLF G TG+GK Sbjct: 539 NQDRKEKILNIDKALGKKVIGQQEAVEKISNAIIRTAVGMKNRHKPIGTFLFTGNTGLGK 598 Query: 502 TEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPH 558 T + L+ L L+RFDMSEYM+ ++ ++ IGAPPG+VG+++GG LT+ V +P+ Sbjct: 599 TYLAKVLADTLYEGEESLIRFDMSEYMDSNSTTKFIGAPPGFVGYEEGGQLTEKVRINPY 658 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG 618 +V+L DEIEKA+ +F+ILLQ++D G LTDN G DF N ++++T+N Sbjct: 659 SVILFDEIEKANKQIFDILLQILDEGRLTDNRGITIDFTNTIIILTSNI----------- 707 Query: 619 LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV 678 L +D+S E+ + F PEF NRLD I+ F+ LS + + ++ ++ E++ + GV Sbjct: 708 LAKEDDSDLYKHELYQYFKPEFINRLDAIVKFNTLSYEDLMEITKIYLEEVKNDFGEIGV 767 Query: 679 SLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 + + E + + GAR + RV+ D + ++ ++L L +T+ L E Sbjct: 768 NFAYTNEVIEKIVDLSDYEEFGAREIRRVVDDKIVTMVSRKILQDDLDSTNVLTIML--E 825 Query: 739 KNELTYGF 746 +E ++ Sbjct: 826 DDEFSFDI 833 >UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN Length = 867 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 144/460 (31%), Positives = 237/460 (51%), Gaps = 20/460 (4%) Query: 13 AFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELEAFIEQTTPVLP 70 A R +RHE++ +EH L L+ L + + +L+ I Q PV Sbjct: 27 ATRLCRSYRHEYVELEHWLKILMDQQRGDIPALLTHYGLSQTVISTQLDRII-QHMPVTK 85 Query: 71 ASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE-VTGANVLVAIFSEQESQAAYLLRKHEV 129 AS ++ + + V++ + Q + +++L+A+ + + Q E Sbjct: 86 ASVQD----LSSRLESVVEGGLVLSQLMASPSPIRTSHILLALLQDTQHQRWLYRLCDEF 141 Query: 130 SRLDVVN-------FISHGTRKDEPTQSSDP-GSQPNSEEQAGGEERMENFTTNLNQLAR 181 +L V + + + Q D ++ +S + + +L Q AR Sbjct: 142 KKLPVPQVAEEYEGLLVNSIEQTSEVQRGDALVTETDSSSSKEAHAALNKWCNDLTQQAR 201 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G IDP+IGRE EL + I +L RRR+NNP+LVGE+GVGKTA+ E LA ++ GDVP ++ Sbjct: 202 DGEIDPVIGREAELRQVIDILLRRRQNNPILVGEAGVGKTAVVEALARKLASGDVPPLLQ 261 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGGQ 300 + SLD+G + AG RG+FE R K+L+ + Q DT ILF DE HT++GAG +G Sbjct: 262 GARLLSLDLGRMQAGASMRGEFESRLKSLIDGISQSDTPVILFCDEAHTLVGAGGQAGTG 321 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 DA NL+KP+L+ G +R+I +TT+ E+ E D AL RRFQ++ I EP+ V ++ Sbjct: 322 -DAVNLLKPMLARGALRMIAATTWSEYKQFIEPDAALTRRFQRVLIGEPNESTAVDMLRA 380 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 + P + HH+V A+ AAV L+++ + R LPDKAI ++D A AR L ++ + Sbjct: 381 IAPHFAQHHNVTIRDGAIHAAVRLSLRNLPSRQLPDKAISLLDTACARVALSQYAQPQAI 440 Query: 421 VNVADIESVV--ARIARIPEKSVSQSDRDTLKNLGDRLKM 458 ++ V+ + EK + ++ L ++ +++ Sbjct: 441 EQLSAQLDVLKTEHQYLVREKQLGEAVDQRLDDVQTQIQA 480 Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 111/343 (32%), Positives = 174/343 (50%), Gaps = 8/343 (2%) Query: 411 LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 V+ I +V++ IP + Q D + + NL RL +FGQ AI+ + Sbjct: 525 QEASPLVYPWVDEQSIAAVLSDWTGIPSGKMLQDDIECVLNLEQRLGDHIFGQRNAIKEI 584 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMER 527 ++AI++ARAG+ + +P+G FL AG TG GKTE L + L L+ F+MSE+ E Sbjct: 585 SQAIRIARAGIQSQERPLGIFLLAGSTGTGKTETANVLVETLYGGAHNLITFNMSEFQEA 644 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 HT+S L GAPPGYVG+ +GG LT+AV + P++V+LLDE +KAH D+ + QV D G + Sbjct: 645 HTLSTLKGAPPGYVGYGKGGKLTEAVRRKPYSVILLDEFDKAHADIQDAFYQVFDKGWME 704 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN---STDAMEEIKKIFTPEFRNRL 644 D GR+ FR +++T N G E E+ + + + + F P R+ Sbjct: 705 DAEGRRVSFRQCFILLTCNQGAEEIEQAYLTANDIKPGALKPLVYDALLRRFAPALLARV 764 Query: 645 DNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 NII + L D + Q+ + LQ +L D+ G +L + W+A + R Sbjct: 765 -NIIPYIPLDQDALAQIASHHLARLQTRLWDEIGATLVTEGDIPGWIASRVCSHPNHGRA 823 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 + +++ L + NE+L + L E+ EL+ F Sbjct: 824 VEELLRQTLLPAVGNEVLKRRHEAEPLREIRLIVEETELSIEF 866 >UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=Proteobacteria RepID=C4I651_BURPS Length = 979 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 149/475 (31%), Positives = 228/475 (48%), Gaps = 26/475 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 L L ++ A + + ++ + H L LL + + ++ AL +++ Sbjct: 12 LGATLFRAIESATVFCKLRGNPYVELVHWLQQLLQQSDSDLHRIVRHAGIERDALDRDIA 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQES 118 + + + + ++RA G + GA ++ A+ E Sbjct: 72 R-----ALAALPAGAGSISDFSHHVETAIERAWVLATLRFGDRRIRGAWLVAALVDTPEL 126 Query: 119 QAAYLLRKHEVSRL---DVVNFISHGTRKDEPTQS-----------SDPGSQPNSEEQAG 164 + L +R+ D ++ + P + + PG + A Sbjct: 127 RRVLLSISPAFARIPHDDALDDVLPAWTAGSPEAADAPYDHVDSAPASPGEPSGATRAAP 186 Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 +E + T+L AR G IDP+IGRE E+ VL RRR+NNPLL GE+GVGKTA+ Sbjct: 187 NGSPLERYCTDLTARARDGDIDPVIGRELEIRTMTDVLLRRRQNNPLLTGEAGVGKTAVV 246 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILF 283 EGLA I GDVP +AD + S+D+G+LLAG +G+FE R K +L+ + ILF Sbjct: 247 EGLALAIANGDVPPKLADVRLMSVDVGALLAGAGMKGEFESRLKGVLEAAAKSVAPVILF 306 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 +DEIHT+IGAG +G DAANL+KP L+ G IR IG+TT+ E+ EKD AL RRFQ Sbjct: 307 VDEIHTLIGAGGQAGTG-DAANLLKPALARGTIRTIGATTWAEYKRHIEKDPALTRRFQV 365 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + + EP V ++ G+ + HH V +A+RAAV L+ +YI RHLPDKAI ++D Sbjct: 366 LQVPEPEEPAAVHMVRGVARAFARHHRVTVRDEAIRAAVALSHRYIPSRHLPDKAISLLD 425 Query: 404 EAGARA--RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL 456 A AR + V + + R E + +L + +R+ Sbjct: 426 TACARVALSQHAAPGELQHVRQRLLAARAERDLLEQEARIGLDAGQSLAAVRERI 480 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 175/345 (50%), Gaps = 10/345 (2%) Query: 399 IDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 + ++ A A A+ V+ A + +VA IP + + ++ L L+ Sbjct: 601 LRELERALAAAQGDA-PLVFPEVDEAIVAQIVADWTGIPVGRMMTDEVAAVRALPATLEA 659 Query: 459 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---E 515 V GQ A+ + E ++ ARAGL KP+G FL AGP+GVGKTE + L++AL Sbjct: 660 RVIGQPDALRQIGERVQTARAGLADPKKPLGVFLLAGPSGVGKTETALALAEALYGGEQS 719 Query: 516 LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFN 575 L+ +MSEY E HTVS L GAPPGYVG+ +GG+LT+AV + P++V+LLDEIEKAH DV Sbjct: 720 LITINMSEYQEAHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHRDVHE 779 Query: 576 ILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR----ETERKSIGLIHQDNSTDAMEE 631 + QV D G + D +GR DFRN +++T+N G S+ M E Sbjct: 780 LFFQVFDKGYMEDGDGRYIDFRNTTILLTSNVGAELSASLCADASLAPDAAALRDALMPE 839 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKG-VSLEVSQEARNWL 690 + K+F F R+ +++ + L + ++V + + ++ ++ ++L +++ Sbjct: 840 LLKVFPAAFLGRV-SVVPYRPLEARALARIVRLHLDRVVARMAERHRIALAYDDAVVDYV 898 Query: 691 AEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 + + GAR + I+ ++ L+ L + + Sbjct: 899 VGRCLVQETGARLLIGFIEQHVLPRLSALWLDAFPSKAALARIDI 943 >UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q21KI1_SACD2 Length = 897 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 150/451 (33%), Positives = 234/451 (51%), Gaps = 16/451 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLL-ALLSNP-SAREALEACSVDLVALRQELE 59 L+ E + + A A H ++ VEH L AL L+ +VD+ + +L+ Sbjct: 21 LSNESKELFEKSIALASSRSHFYIDVEHWLTEALAEEQREIIAILKHFNVDVDRVHADLD 80 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRN-EVTGANVLVAIFSEQES 118 +E T + + + + R+L A S + +V ++L+A+ Sbjct: 81 LALENT-----KTGNDGFPKISPDIVRLLFEAWMIASSQYASVQVLPVHILLALVDSAGL 135 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 + + + + D G N ++ ++ FTTNL Q Sbjct: 136 KTKIGKISKQFEAISGEEIRTQCETLLRGEALQDQGEATN--KKLTKTPSLDQFTTNLTQ 193 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A+ G ID ++GR+ E+ + I VLCRR++NNP+L GE+GVGKTA+ EGLA +I QGDVP Sbjct: 194 QAKDGKIDSILGRDDEIRQIIDVLCRRKQNNPILTGEAGVGKTAVVEGLAVKIAQGDVPT 253 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAAS 297 + + I SLD+G L AG +G+FE R K ++K+++Q + ILFIDE HT+IGAG + Sbjct: 254 AIENVEIRSLDLGLLQAGAGVKGEFENRLKNVIKEVQQSVQSIILFIDEAHTLIGAGNQA 313 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G DAANL+KP L+ G++R I +TT+ E+ FE D AL RRFQ + + EPS+++ + + Sbjct: 314 GSG-DAANLLKPALARGELRTIAATTWAEYKKYFESDAALTRRFQVVKVEEPSVDKAIIM 372 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA----RLMP 413 + P E HH V AV A+V L+ +YI R LPDK + ++D A AR P Sbjct: 373 LRNAAPTLEQHHKVVILDAAVSASVNLSHRYIPGRQLPDKCVSLLDTACARVNLSQNTTP 432 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQS 444 + + + +IE + R+ + EK S Sbjct: 433 ARIVQYSQEIKNIEFEIERLNQEAEKGYEHS 463 Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats. Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 16/390 (4%) Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR------KKTVNVADIESVVA 431 + +A E A + + D + A D+ + A R+ S + V+ + VVA Sbjct: 497 INSAREKAEEKVQDSDNEESATDLTNTLIAELRVKLKSISGSQPLIYECVDEQVVAEVVA 556 Query: 432 RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 IP + + + +L ++ V GQ ++ +++A++ ARA L +P+G F Sbjct: 557 DWTGIPVGRMQSDEIQNVLSLEQTMEKRVIGQSHGLKLISKAVQTARAKLSDPKRPLGVF 616 Query: 492 LFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 + GP+GVGKTE + L++ L + +MSE+ E H VS L+G+PPGYVG+ +GG+ Sbjct: 617 MLVGPSGVGKTETALTLAEQLYGSEQNMTVINMSEFKEEHKVSMLMGSPPGYVGYGEGGV 676 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT+AV + P++V+LLDE+EKAHP V +I QV D G L D GR DF+N V++MT+N Sbjct: 677 LTEAVRRKPYSVVLLDEMEKAHPGVQDIFYQVFDKGILRDGEGRDIDFKNTVIIMTSNTA 736 Query: 609 VRETERKSIGLIHQDNSTDAMEEI----KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 + E+ I + +E I ++ + P F R++ I ++ L + ++ Sbjct: 737 SAQIEQLCIDPETKPEPKALLEAIEGTLRETYKPAFLGRINLIPYY-PLDEQCLSEIAVM 795 Query: 665 FIVELQVQLD-QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFG 723 + +Q +++ V L S + + GAR ++ ++ + L LA ++L Sbjct: 796 QLHAIQQRVETNYKVELNYSDKLVEHVVSLCAQSDTGARKISALLNNTLLPVLAEKILTE 855 Query: 724 SLVDGGQVTVALD-KEKNELTYGFQSAQKH 752 +D +V +D E+ E S +++ Sbjct: 856 IALDKALESVEVDVSEEGEFVVKINSKKEN 885 >UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostreococcus RepID=A4RQJ1_OSTLU Length = 807 Score = 359 bits (920), Expect = 4e-97, Method: Composition-based stats. Identities = 150/432 (34%), Positives = 236/432 (54%), Gaps = 22/432 (5%) Query: 325 QEFSNIFEKDRALARRFQ--KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAV 382 E+ + + + R+ + K+ I + + E ++ + +A K + V Sbjct: 377 DEYRRAYANNSFIKRKVENAKMKIAQATQAEAGSVLAAELGRAQAE------LKKLEQQV 430 Query: 383 ELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVS 442 + + + A+ + + GA R V D+ +VV+R +P + Sbjct: 431 KTTEDELTAA---EAAVLELKDGGAMMRE--------EVTDNDVAAVVSRWTGVPVAKLV 479 Query: 443 QSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKT 502 S++ L L L V GQ+ A+ ++ EA++ +RA L + PV SF+F GPTGVGKT Sbjct: 480 SSEKAKLLQLEAELHQRVIGQEAAVTSVAEAVQRSRADLADPNGPVASFMFLGPTGVGKT 539 Query: 503 EVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHA 559 E+ L+ L L+R DMSEYME+H+V+RLIGAPPGYVG+D+GG+LTDAV + P++ Sbjct: 540 ELAKALASYLFNSDTALVRLDMSEYMEKHSVARLIGAPPGYVGYDEGGMLTDAVRQKPYS 599 Query: 560 VLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL 619 V+L DEIEKAH DVFN+LLQ++D G +TD GR FRN +++MT+N G E + Sbjct: 600 VVLFDEIEKAHVDVFNVLLQLLDEGHVTDTQGRNVSFRNCLIIMTSNLGSDEISYANKRR 659 Query: 620 IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVS 679 + M+ ++ F PEF NRLD I F+ L+ I ++V +L ++D + ++ Sbjct: 660 NKVNVKDAVMQHVRSHFRPEFVNRLDEFIVFEPLTHAQIEEIVQLQTKKLSQRIDTQRMN 719 Query: 680 LEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 L + + A LA +GYD A GARP+ R IQ L +PLAN +L G + + V D++ Sbjct: 720 LSLDRSAIEHLARQGYDPAYGARPVRRAIQRELIQPLANAMLRGVFNEDDTILVTADRQG 779 Query: 740 NELTYGFQSAQK 751 L+ G + ++ Sbjct: 780 ICLSNGPKIVRE 791 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 112/316 (35%), Positives = 188/316 (59%), Gaps = 9/316 (2%) Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 I+ + + Q + +E F T++ AR G +DPL+GRE+E+ R Sbjct: 28 IAMMRQMQQQMQQMQQQQNGAQNPEDEELSALERFCTDVTDEARRGLLDPLVGREEEVRR 87 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 I +LCRR KNNP+L+G+SGVGKTAI EGLA RIV DVP+ + + +D+G++ AG Sbjct: 88 LIHILCRRTKNNPVLLGQSGVGKTAIVEGLAQRIVNDDVPQALRGAKLLEVDLGAVGAGC 147 Query: 258 KYRGDFEKRFKALLKQL---EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 + G+FE+R +++++ +LFID+IH + A + A ++KP L G Sbjct: 148 QMPGEFEERLTIIVQEVVDATAKGPVVLFIDDIHNLCPAPPMNNNG---AAILKPALGRG 204 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT 374 +R +G+T+ +F E+D AL RRFQ++ + EP++++TV I+ GL+P+YE HH++ + Sbjct: 205 LLRCVGATSADKFKKTIEQDAALERRFQQVPVEEPNVDDTVSILRGLRPRYEQHHNIAIS 264 Query: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIA 434 A+ AA +L+ +Y++ R LPDKAID++DEA A R+M K K + + +A++ Sbjct: 265 EGALLAAAQLSARYVSGRQLPDKAIDLLDEAAAAVRMM---KTHKPDGLDMADRKIAQLQ 321 Query: 435 RIPEKSVSQSDRDTLK 450 + ++ + ++ + K Sbjct: 322 KERDQLLRKNAGELAK 337 >UniRef50_A9GQT0 ATPase with chaperone activity, two ATP-bindingdomains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GQT0_SORC5 Length = 1199 Score = 358 bits (919), Expect = 4e-97, Method: Composition-based stats. Identities = 164/543 (30%), Positives = 255/543 (46%), Gaps = 36/543 (6%) Query: 186 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTI 245 PL R+ EL R +L + LLVG GKTA+A LA+ Q + + Sbjct: 256 PPLACRDAELARLAALLDGEERLGVLLVGPEHAGKTALA--LAYVARQTRL--------V 305 Query: 246 YSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAAN 305 Y+ L+AG G +++R ++ + +++L+ + + ++ A GG VD A Sbjct: 306 YATSGAQLIAGMSGLGQWQERIHGVM-EAAAALDAVLYFENLDDLL-AERVDGGHVDLAG 363 Query: 306 LIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKY 365 ++P L G++RV+ + + A +I I S +T + + + Sbjct: 364 AMRPYLDEGRVRVLCELRDDRLDALEGRHWAFFAGLSRIRIDPLSAADTRKALAERDGRV 423 Query: 366 EAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA-RARLMPVSKRKKTVNVA 424 E H A+ A V+LA +Y+ P KA+ + ++ A R T+ + Sbjct: 424 EPHRPA-VAGDALTALVDLAERYLPYSAFPGKAVRLYEDLRAVHERERTAQGEPVTLGRS 482 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 D+ + + +P + + + L V GQ++A+ AL E I + +AGL Sbjct: 483 DLYELFSMRTGMPAFLLRDDLPLRVDRVARDLGASVVGQERAVRALAETIAVVKAGLSPP 542 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYV 541 KP+ +FLF GPTGVGKTE+ L+ L L RFDMSE+ RLI G Sbjct: 543 DKPLAAFLFVGPTGVGKTELARALAGLLFGSPDRLARFDMSEFSSEGAADRLIRGTDG-- 600 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 GGLLT V + P VLLLDEIEKAH VF++LLQV+ G L+D GR A F N ++ Sbjct: 601 ---AGGLLTQRVREQPFCVLLLDEIEKAHRAVFDLLLQVLGEGRLSDARGRTAYFHNAIV 657 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAMEE-----------IKKIFTPEFRNRLDNIIWF 650 +MT+N G E R G + + E+ + F EF NR+D ++ F Sbjct: 658 IMTSNLGAAE-RRARAGFAGERGAEAPEEQAALDEAHYQRVVAGAFRQEFVNRIDRVVPF 716 Query: 651 DHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 L+ + +V L + L + GV+LEVS+ A LAE G+ A GAR + R + Sbjct: 717 RALTRAELAEVARLTARRLAQRRGLSEAGVALEVSERALARLAEDGHAPAYGARALRRHV 776 Query: 709 QDN 711 +++ Sbjct: 777 EEH 779 >UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BFB3_9FIRM Length = 843 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 153/426 (35%), Positives = 239/426 (56%), Gaps = 19/426 (4%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEA 60 +Q + A A + ++ H+ A+L R + V + + E Sbjct: 7 SQSSVEIIKEANKVAIRKNNVEVSDLHIFYAILTLEEKLIRTYFKELKVIYQDVLDDTEN 66 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + L +++ + S+QR L A ++ ++ ++++A+ E + Sbjct: 67 ALTK----LRSAKGISSLYTSRSYQRALLIAEEISRNQFEEKIKTEHLMLALLREADMPT 122 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A L H ++ + N + + + D + N +E + T L + A Sbjct: 123 AKLAATHGLTYKN-FNELVAKKFNEYLLKGVDQETIIN----------LEKYGTVLTKEA 171 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 G +DP+IGRE+E AI++L RR KNNP+L+G++GVGKTAI EG+ RIV GDVP+ + Sbjct: 172 IEGRLDPVIGREEETRTAIRILSRRIKNNPVLIGDAGVGKTAIVEGIVQRIVAGDVPDDL 231 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASGG 299 D I+SLD+ SL+AG KYRGDFE+R K +L+ ++ ILFIDEIH IIG+G+AS G Sbjct: 232 KDKIIFSLDMTSLVAGAKYRGDFEERLKKILEIIKDSKGRIILFIDEIHNIIGSGSAS-G 290 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D AN++KP+L+ G I IG+TT +E+ E D+AL RRFQKI I EPSIE T+ I+ Sbjct: 291 TMDTANMLKPMLARGDILTIGATTIEEYRKYIEVDKALDRRFQKILIEEPSIETTIAIMR 350 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+K KYE HH ++ T A+ AV+L+ +++ +R LPD AIDVIDEA A+ ++ K ++ Sbjct: 351 GIKSKYENHHMIKITDPALTEAVKLSKRFLTERKLPDVAIDVIDEACAQVKMARDQKPEE 410 Query: 420 TVNVAD 425 + Sbjct: 411 LDELHR 416 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 88/365 (24%), Positives = 177/365 (48%), Gaps = 26/365 (7%) Query: 396 DKAIDVIDEAGARARLMPVSKRKKT----VNVADIESVVARIARIPEKSVSQSDRDTLKN 451 DK + + D + + + V V++++ ++++++ +P+ + D++ Sbjct: 498 DKFVSLKDNVSEKLKKIENQGEFYPLRTKVGVSEVKDIISKMSGMPKSKLQYDKLDSINI 557 Query: 452 LGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA 511 + ++LK G D I+ + +A GL KPV SF+ GP+ GK+ + L+ Sbjct: 558 VREKLKEEFVGGDDMIDKIINTYIIAEGGLFERSKPVLSFIVTGPSSSGKSYIAKLLADY 617 Query: 512 LGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEK 568 L LL FDMSE+ ++ ++++LIGAPPGYVG++ GG+LT A+ P++VL+ + IE Sbjct: 618 LYEGDKSLLSFDMSEFTDKSSITKLIGAPPGYVGYEFGGVLTQALRTKPYSVLVFENIEN 677 Query: 569 AHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA 628 AH +V N++LQ++ +GT+ DN GR + +N ++V+T D Sbjct: 678 AHFEVQNLVLQIVQDGTIKDNKGRDINLKNSIVVLTMTV------------------EDG 719 Query: 629 MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARN 688 E K+ +F +D + L D + +++ EL+ L ++ ++L + + Sbjct: 720 DESAKEKLDVDFGKYVDYVFKLKRLDDDKLDKLISLNFKELEKALAERQINLSYAGGFFD 779 Query: 689 WLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 + D AR + ++I+ ++ + + L + ++ + D E N+ T + Sbjct: 780 KFGKYAKDEGFDARSLKKLIEQDVYFLICEKNLTSEIKAFSELILDFDGE-NKFTVKLKE 838 Query: 749 AQKHK 753 + Sbjct: 839 KNNKE 843 >UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria RepID=CLPB_YEREN Length = 890 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 155/509 (30%), Positives = 245/509 (48%), Gaps = 39/509 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L+ L + A + + ++ + H L L + + +VD+ A + L Sbjct: 12 LDATLFKGIESATTICKLRGNPYVELIHWLNQLWHQEDNDLKHIVRYFAVDVDAFERGLA 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + PV S + L+ +R A + ++L+A+ + E + Sbjct: 72 QALAR-LPVGATSISDFSYHIELAIERAWVYASLECL---DTRIRSGHLLLAMLTNMELR 127 Query: 120 AAYLLRKHEVSRLDV------VNFISHG--------TRKDEPTQSSDPGSQPNSEEQAGG 165 A L E+ ++ + NFI+ T + PG N+ Sbjct: 128 RALLAIAPEMEKIPLEHLSSDFNFITQASPETNEAATDGSPMYDGTLPGEASNAINGKS- 186 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 + +TT+L LAR G IDP++GR E+ + +L RRR+NNPLL GE+GVGKTA+ E Sbjct: 187 TATLAQYTTDLTALAREGKIDPVLGRNHEISTMVDILLRRRQNNPLLTGEAGVGKTAVVE 246 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFI 284 GLA IV G++P ++ ++ +LD+ +L AG +G+FE R K +L + ILFI Sbjct: 247 GLALAIVAGEMPPALSQVSLLTLDVVALSAGASMKGEFEARLKNVLDEAMASPTPVILFI 306 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DE+HT++GAG + G DAANL+KP L+ G++R IG+TT+ EF EKD AL RRFQ + Sbjct: 307 DEVHTLVGAGG-NAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVL 365 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EP + + ++ GL P E HH V +A++AAV L+ +YI R LPDKAI ++D Sbjct: 366 QVDEPDEDTAISMLRGLTPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAISLLDT 425 Query: 405 AGARAR----LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKN--------L 452 A AR P ++ T ++ ++ + + Q +R L Sbjct: 426 ACARVAVAQFSQPAELQQLTFQSETAQTELSSLEKAQHFGKGQDERTALLEATIAQHSAA 485 Query: 453 GDRLKMLVFGQDKAIEALTEAIKMARAGL 481 ++L+ Q A L AI R L Sbjct: 486 ANKLEQR--WQ--AERELVTAITATRTVL 510 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 120/416 (28%), Positives = 197/416 (47%), Gaps = 13/416 (3%) Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAA-VELAVKYIND--RHLPDKAIDVIDE 404 E +I + N L+ +++A ++ A R EL + D + + E Sbjct: 476 EATIAQHSAAANKLEQRWQAERELVTAITATRTVLYELVSQPTPDEEKRQQYQQQLAQLE 535 Query: 405 AGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD 464 + VN I ++VA I + + D + L RL+ V GQ Sbjct: 536 EQLLLIRSAQPLVQAEVNATVIANIVADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQP 595 Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDM 521 A+ L+E I ARAG+ KP+G F+ GP+GVGKTE + +++++ L+ +M Sbjct: 596 HALVQLSENIMTARAGMADPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNLITINM 655 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM 581 SEY E HTVS L G+PPGYVG+ +GG+LT+AV + P++V+LLDEIEKAH DV + QV Sbjct: 656 SEYQESHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVF 715 Query: 582 DNGTLTDNNGRKADFRNVVLVMTTNAGVRETE----RKSIGLIHQDNSTDAMEEIKKIFT 637 D G + D GR DF+N +L++T+N G + E+ K+F Sbjct: 716 DKGQMEDGEGRFIDFKNTILLLTSNVGSELLSNLFADPDTAPDQDGILSALQPELLKVFP 775 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD-QKGVSLEVSQEARNWLAEKGYD 696 F R+ +I + L + +V + + +L Q ++L+ S + + + Sbjct: 776 AAFLGRVT-VIPYLPLQQSALQHIVRLHLDRIGQRLQSQHQLTLQYSDVVVDDVVSRCSV 834 Query: 697 RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKH 752 GAR + R I+ N+ + +L Q+ V +DK +N+ T + + + Sbjct: 835 AETGARMLIRYIEQNITPEIGKFILRDHDAIPNQI-VFVDKVENKFTVSVLNEKIN 889 >UniRef50_D2KTB1 BC18 (Fragment) n=1 Tax=Babesia caballi RepID=D2KTB1_BABCB Length = 1037 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 134/431 (31%), Positives = 220/431 (51%), Gaps = 22/431 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELE 59 + L ++ AR + +H+ L L + A + L V + R+ E Sbjct: 98 FSDNAVKVLMLSQEEARRAALNQIATKHIFQGLVCLDSGLAAQVLREFDVTVKKTREAAE 157 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + ER + + L+ + + G + ++L+ + + Sbjct: 158 TAASE-PSDTKEASGERLMTFSPDAKEALELSSAEAEHMGHTTIETEHILLGVLGSRSEG 216 Query: 120 AAYLLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSE--------------E 161 A LL ++ R + +I E + Q S+ + Sbjct: 217 MAQLLEALSLNADVVRKATLKYIEEHKEHSEDRAQQETWKQTLSQYSYIPAQGRAVEVTK 276 Query: 162 QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 A + FT +L + A G + ++ R+ E++RAI+ LCRR K NP+L+GE GVGKT Sbjct: 277 DAYAASPLGAFTVDLTEKAEQGKLQKVLCRDAEIDRAIRTLCRRHKRNPILIGEPGVGKT 336 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI 281 A+ EGLA +++ G + + + + LDIG ++AG ++RG FE+R L+++++ + I Sbjct: 337 AVVEGLAMQLLDGAMVPSLRNKRVKQLDIGLMVAGARFRGQFEERLTKLIEEVKAMGDVI 396 Query: 282 LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 L IDE H ++GAGA G +DAANL+KP L+ G+I+ I TT +E+ FEKD AL+RRF Sbjct: 397 LVIDEAHMLVGAGAGEGA-LDAANLLKPSLARGEIQCIAITTPREYRKYFEKDPALSRRF 455 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 Q I + EPS E+T +II Y H V+Y KAV AA++ + ++I DR LPDKA+D+ Sbjct: 456 QPIYVNEPSDEDTKKIIAATTESYGRFHRVKYDPKAVVAALKYSKQFIQDRFLPDKALDI 515 Query: 402 IDEAGARARLM 412 +DEAG+ A++ Sbjct: 516 LDEAGSLAKMR 526 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 115/338 (34%), Positives = 186/338 (55%), Gaps = 18/338 (5%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 V + + VV+ IP K +S+ + + ++N+ + + G ++A+E + +AI+ A A Sbjct: 654 EVGMEHVAEVVSTWTGIPLKKLSEDELEAMRNMEREIHKSIVGHEEAVEHICKAIRRATA 713 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG--IELLRFDMSEYMERHTVSRLIGAP 537 + +P+GSFLF GP GVGK+E+ L+K L L++ DMSEY E H++SR++G+P Sbjct: 714 KIKDPDRPIGSFLFCGPPGVGKSEIAKALTKFLFAKENLIKLDMSEYNEPHSISRILGSP 773 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGY G D GG LT+ + K P++V++ DEIEKAH DV N+LLQ++++G LTD+ + F+ Sbjct: 774 PGYKGHDAGGQLTEKLRKSPYSVVMFDEIEKAHRDVLNLLLQILEDGKLTDSRNQVVSFK 833 Query: 598 NVVLVMTTNAGVRETERKS-----IGLIHQDNSTD-----------AMEEIKKIFTPEFR 641 N V++MT+N G ER S G ++ TD EE+K F PE Sbjct: 834 NAVIIMTSNLGSNVIERASRGVHAFGFNVEEKVTDPKENYTKIKALVCEELKSQFKPELI 893 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 +R+D+II F L + Q+ I E + + G S+ +++ + D GA Sbjct: 894 DRIDDIILFRPLEEQQLRQIAVLMIEETVKRARENGFSVVADDAFVDYVLKLPRDEKGGA 953 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 RP+ R+I +L+ LA + V G + V ++ Sbjct: 954 RPLRRLITTSLEDKLAEFFISQEYVPGQRYRVTVEGTN 991 >UniRef50_B1GUR2 ATP-dependent Clp protease-like protein n=1 Tax=Geobacillus stearothermophilus RepID=B1GUR2_BACST Length = 424 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 137/435 (31%), Positives = 234/435 (53%), Gaps = 26/435 (5%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQEL 58 M + +L+ SL++A +A + + EHLL L+++ + L +DL +++E+ Sbjct: 3 MFSSDLQNSLSLAKQQAWKFGVSEIKSEHLLWGLIADTKFNSAQILINAGIDLDVVKKEI 62 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E+ + P SE ++ +L A H N + ++L ++ S + Sbjct: 63 ESKLTSIKPGRMYSENGEKI-----YKSMLSLAEHHQ-----NIIDTQHLLYSLIS-TDC 111 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 +++K L + + + T + ++ + +L Sbjct: 112 TGTNIIKKIGGDPLRIKSLCLEYINGESLTST------------YYNTPNLDKYCIDLTD 159 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 L+ G + +GREKE++ VL +++K N ++ G GVGKT++ EGLA RI +V + Sbjct: 160 LSTKGKLSFPVGREKEIDILQTVLLKKKKRNIVITGLPGVGKTSLVEGLAIRITSKEVSK 219 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + I SL + SL+AGTK+RG+FE+R ++++L N +LFIDEIHT+IGAGA G Sbjct: 220 KLYNLKIKSLSLASLVAGTKFRGEFEERLVGIVEELSMYPNIVLFIDEIHTLIGAGAVPG 279 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA+N++KP+L++G IG+TT +E+ F+KD AL RRFQ+I + EPS ET++I+ Sbjct: 280 G-LDASNILKPVLATGNFICIGATTEEEYEKYFKKDAALDRRFQRIPLQEPSKTETLKIL 338 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 + L +Y +H+V Y+ + + VELA KY DR+ PDKAID++D GA+ Sbjct: 339 SVLSHEYGKYHNVFYSQEVLEEIVELADKYFPDRYFPDKAIDLLDYVGAKNSHKFTYNEV 398 Query: 419 KTVNVADIESVVARI 433 ++ DIE + + Sbjct: 399 YKISKLDIERATSDL 413 >UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmodium RepID=B3L4X1_PLAKH Length = 906 Score = 354 bits (908), Expect = 8e-96, Method: Composition-based stats. Identities = 145/459 (31%), Positives = 240/459 (52%), Gaps = 17/459 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 LN+ + + LN A+ + H + H+L AL + L+ SV+ L+Q L+ Sbjct: 38 LNRTINI-LNAGKNIAKRYGHSQLKPVHILSALAKSDYGSNLLKENSVNASNLKQYLDTA 96 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 +EQT P + + + VL A +V ++L + +++ Sbjct: 97 LEQTRAGPPLDNKSKIAYSDQ-VKEVLAEAEALANKYKSQKVDVEHLLSGLMNDE----- 150 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 L ++ + + + G K + ++ ++ G +E F +NLN+ R Sbjct: 151 --LVNEILNEVYLTDEAVKGILKSKLEKTKK------DKDGKSGGLYLEQFGSNLNEKVR 202 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G + + GR++E+ I+ L R KN+P+LVG+ G GKT I EGL +RI +GDVP+ + Sbjct: 203 NGKLQGIYGRDEEIRAVIESLLRYNKNSPVLVGQPGTGKTTIVEGLVYRIEKGDVPKELR 262 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN-SILFIDEIHTIIGAGAASGGQ 300 T+ SL+ +GT YRG+FE R K ++K+L+ N ILF+DEIH ++GAG A GG Sbjct: 263 GYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKNKIILFVDEIHLLLGAGKAEGGT 322 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 DAANL+KP+LS G+I++IG+TT E+ E A RRF+KI + PS+E T++I+ Sbjct: 323 -DAANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFERRFEKILVEPPSVENTIKILRS 381 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 LK KYE+ + + T KA+ AA +++ ++I DR+LPDKAID++++A + ++ K + Sbjct: 382 LKSKYESFYGIHITDKALVAAAKVSDRFIKDRYLPDKAIDLLNKACSFLQVQLSGKPRII 441 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 +A E V + + NL + Sbjct: 442 DVTEREIERLAYEISTLEMDVDKVSKRKYNNLIKEFENK 480 Score = 307 bits (787), Expect = 9e-82, Method: Composition-based stats. Identities = 129/399 (32%), Positives = 206/399 (51%), Gaps = 27/399 (6%) Query: 378 VRAAVELAVKYINDRHLP------------DKAIDVIDEAGARAR-LMPVSKRKKTVNVA 424 + ELA YI+ P +K ++V E A + V Sbjct: 508 LNELKELAQNYISANKEPPIELQNSLKDAQEKYMEVYKETLAYVEAKTHNAMNVDAVYQE 567 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 + + R + +P S+S L + L + G + I++L++A+ A G+ Sbjct: 568 HVSYIYLRDSGMPLGSLSFESSKGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDP 627 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYV 541 KP+G+FLF GPTGVGKTE+ L+ L L+R +MSE+ E H+VS++ G+PPGYV Sbjct: 628 EKPIGTFLFLGPTGVGKTELAKTLAIELFSSKDNLIRVNMSEFTEAHSVSKITGSPPGYV 687 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 GF G LT+AV + PH+V+L DE+EKAHPDVF +LLQ++ +G + DN+ R DF N ++ Sbjct: 688 GFSDSGQLTEAVRERPHSVVLFDELEKAHPDVFKVLLQILGDGYINDNHRRNIDFSNTII 747 Query: 602 VMTTNAGVRETERKSI-----------GLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 +MT+N G ++K + D +++ KK+F PEF NR+D I F Sbjct: 748 IMTSNLGAELFKKKLFFDANNSDTPEYKRVFDDLRIQLIKKCKKVFKPEFVNRIDKIGIF 807 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 + LS + ++V +L+ +L++K + + VS++A +++ ++ YD +GARP I+ Sbjct: 808 EPLSKKNLREIVKLRFKKLEKRLEEKNIHVSVSEKAVDYIIDQSYDPELGARPTLIFIES 867 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 + A L LVD V V +K N L + Sbjct: 868 VIMTKFAIMYLKKELVDDMDVHVDFNKAANNLVINLTAV 906 >UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organisms RepID=CLPB2_SYNPX Length = 900 Score = 354 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 146/444 (32%), Positives = 231/444 (52%), Gaps = 30/444 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + L AR RH+ + VEHL+ L S+ S R +E + L LE Sbjct: 18 FSDPAWELLLAGQDMARRWRHDQLDVEHLIQVLFSDSSFRRWVEPLPLRSDDLLDRLEDV 77 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + P +++L+ A G + ++VA+ ++ A Sbjct: 78 LADQPPAR-----GDQLFIGEDLEQLLETADQVRGRWGDRSIDVPQLIVAVGADPRIGA- 131 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE--------------------E 161 L ++ + + + + P P + E Sbjct: 132 ELFAAQGLAVDRLESLLRQPSVSPAPAPPPVPTAASAPAPTPRSAPAPRVMAPEPEPMVE 191 Query: 162 QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 +E + +L + A G +DP+IGR+ E+ I+VL RR KNNP+L+GE GVGKT Sbjct: 192 LEREPSALEAYGRDLTEEAEAGSLDPVIGRDSEIRNLIKVLSRRSKNNPVLIGEPGVGKT 251 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNS 280 AIAE LA RIV G+VP+ + + +LD+G+L+AG K+RG FE+R +++L+++ + D+ Sbjct: 252 AIAELLAQRIVAGEVPDSLQGLRLIALDLGALIAGAKFRGQFEERLRSVLEEVSRSDSGV 311 Query: 281 ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR 340 +LFIDE+HT++G + DA +L+KP L+ G +R IG+TT +E+ EKD AL RR Sbjct: 312 VLFIDELHTVVG---SDRSSTDAGSLLKPALARGDLRCIGATTPEEYRRTVEKDPALNRR 368 Query: 341 FQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 FQ++ I EP +E +++I+ GL+ +YE HH V T +A++ A LA +YI+DR LPDKAID Sbjct: 369 FQQVLIREPDLELSLEILRGLRERYELHHGVTITDEAIQTANRLADRYISDRCLPDKAID 428 Query: 401 VIDEAGARARLMPVSKRKKTVNVA 424 +IDEA A+ ++ SK + Sbjct: 429 LIDEAAAQLKIEVTSKPQVVEEAE 452 Score = 314 bits (805), Expect = 7e-84, Method: Composition-based stats. Identities = 151/425 (35%), Positives = 223/425 (52%), Gaps = 36/425 (8%) Query: 321 STTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRA 380 T +E + ++D L I E E ++ + +Y+ H V+ +A+ A Sbjct: 498 RTQLEELGQLLQQDEDLRHA-----IAEAEREGALE--EAARLQYDQLHTVQQRREALEA 550 Query: 381 AVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKS 440 + A A+ + ++ V DI +VAR IP + Sbjct: 551 SQ------------------------AEAQSAGTALLREQVEAGDIADLVARWTGIPVQR 586 Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 + +R L L L V GQ +A+ A+ AI+ ARAG+ +PVGSFLF GPTGVG Sbjct: 587 LLAGERRKLLALESHLSERVIGQVEAVAAVAAAIRRARAGMKDPRRPVGSFLFLGPTGVG 646 Query: 501 KTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 KTE+ L+ +L E L+R DMSE+MER+ +RLIGAPPGYVG+++GG LT+AV + P Sbjct: 647 KTELAKALATSLFDEEEALVRLDMSEFMERNASARLIGAPPGYVGYEEGGQLTEAVRRRP 706 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI 617 +AVLLLDE+EKAHPDVFN+LLQV+D+G LTD+ G DFR+ V+VMT+N + Sbjct: 707 YAVLLLDEVEKAHPDVFNLLLQVLDDGRLTDSQGLTVDFRHTVVVMTSNLASPVILEHAR 766 Query: 618 GLIHQDN--STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ 675 D + F PEF NR+D +I F L + ++V + +L + + Sbjct: 767 SGSSDDAQLQQQVDAALSSQFRPEFLNRIDEVIRFRPLKVKDLVRIVRLQLADLSTLMAE 826 Query: 676 KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 +G+SLEV + LA +G++ GARP+ RV++ L+ PLA +LL + V Sbjct: 827 QGLSLEVDDAVADSLARQGHEPEYGARPLRRVLRRQLENPLATQLLEERFRSAHGIRVRC 886 Query: 736 DKEKN 740 + Sbjct: 887 GTDDG 891 >UniRef50_Q4FY62 Serine peptidase, putative n=12 Tax=cellular organisms RepID=Q4FY62_LEIMA Length = 817 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 135/302 (44%), Positives = 201/302 (66%), Gaps = 1/302 (0%) Query: 159 SEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV 218 + E ++ + +L + AR G +DP++GRE+ + R IQV+ RR KNNP+L+GE GV Sbjct: 92 NPNAVPPGEFLKKYARDLTEEARTGRLDPIVGREEVIRRTIQVVSRRTKNNPVLIGEPGV 151 Query: 219 GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQD 277 GKTAI EGLA RIV+G+VPE + D +Y+LD+G+L+AG K+RG+FE+R K +LK +E Sbjct: 152 GKTAIVEGLAQRIVKGEVPESIKDRQVYALDMGTLVAGAKFRGEFEERLKGVLKDTIESH 211 Query: 278 TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRAL 337 ILFIDE+HT++GAG++ G +DAANL+KP L+ G++ IG+TT E+ EKD AL Sbjct: 212 GKVILFIDELHTLVGAGSSGDGSMDAANLLKPSLARGELHCIGATTLDEYRQHIEKDAAL 271 Query: 338 ARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDK 397 ARRFQ + +TEP++EET+ I+ G+K KYEAHH +A+ A + +Y+++R LPDK Sbjct: 272 ARRFQSVLVTEPTVEETISILRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLSERRLPDK 331 Query: 398 AIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 AID+IDEA +R RL SK + + + A +K + ++ L+NL +++ Sbjct: 332 AIDLIDEAASRLRLQQESKPEALDLIERELIRLKIEAEAVKKDKDEVGKEKLENLYEQIS 391 Query: 458 ML 459 Sbjct: 392 QK 393 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 153/416 (36%), Positives = 231/416 (55%), Gaps = 21/416 (5%) Query: 323 TYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAV 382 +E+ + E+ + FQ I + + ++ L+ E + A Sbjct: 393 KQKEYDALEERWKKEKNLFQTIK-------QRTEELDVLRHHLEQA----MNSGDFAKAG 441 Query: 383 ELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVS 442 E+ I + K I+ + +V DI V+AR IP + Sbjct: 442 EIQHSQIPNLL---KQIEKDKHLASSKNF----MVHDSVTSKDIAEVIARATGIPVAQLM 494 Query: 443 QSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKT 502 S+R+ L ++ LK + GQD AIE++T ++++RAGL +P+GSFLF GPTGVGKT Sbjct: 495 TSEREKLIHMDAELKKTIMGQDAAIESITNVVRISRAGLHSHKRPLGSFLFLGPTGVGKT 554 Query: 503 EVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHA 559 EV L+K L + + R DMSEYMERH+V RLIGAPPGYVG+++GG LT++V + P+ Sbjct: 555 EVCKSLAKFLFDDESFICRIDMSEYMERHSVHRLIGAPPGYVGYEEGGELTESVRRRPYQ 614 Query: 560 VLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL 619 ++L DE EKAHP V NILLQV+D G LTD++GR+ DF+N ++++T+N G R G Sbjct: 615 IVLFDEFEKAHPSVSNILLQVLDEGHLTDSHGRRVDFKNTIIILTSNIGADVIARLPEGK 674 Query: 620 IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVS 679 ME++++ PEF NRLD+II F+ LS + I +V+ ++Q L + ++ Sbjct: 675 PSISAMPAVMEQVRQRLAPEFINRLDDIIMFNRLSREDIRSIVEILFAQVQKMLTEHNIT 734 Query: 680 LEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 LE S E +WL+ GY GARP+ R++Q L LA LL G + +G V +++ Sbjct: 735 LEESTEVYDWLSVNGYSAVYGARPLKRLVQSELLNQLALMLLDGRVREGEHVRLSV 790 >UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_ECOLX Length = 919 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 154/500 (30%), Positives = 250/500 (50%), Gaps = 23/500 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 LN + +L MA + + +TV H+LL +L+ P R E + LRQ L Sbjct: 13 LNPFAKQALEMAASECMSQQASEITVAHVLLQMLAIPRNDVRVIAERTGISAEDLRQALT 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ P ++E P L + + + + +E+ +L+ + Sbjct: 73 V---ESYPGGRSAEGYPSFSPML-IEWLKESWLLASAQMQHSELRSGVLLLTLLHSPLRY 128 Query: 120 AAYLLRKH--EVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 + ++R + + T++ + G P + E G+ + + N+ Sbjct: 129 IPPAAARLLTAINRDQLQQDFAAWTKESAESVDLAGGQTPRATE--TGDTLLARYAKNMT 186 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 AR G +DP++ R E++ I +LCRRRKNNP++VGE+GVGK+A+ EGLA RIV G VP Sbjct: 187 ADARNGRLDPVLCRNYEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRIVAGQVP 246 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGAA 296 + + + I +LD+G+L AG +G+FEKRFK L+ ++ ILFIDE HT+IGAG Sbjct: 247 DKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIFSPVPVILFIDEAHTLIGAGNQ 306 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 GG +D +NL+KP L+ G+++ I +TT+ E+ FEKD AL+RRFQ + ++EP+ E Sbjct: 307 QGG-LDISNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEATI 365 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 I+ GL YE H V A++AA L+ +Y++ R LPDKAIDV+D A AR + S Sbjct: 366 ILRGLSAVYEQSHGVLIDDDALQAAATLSERYLSGRQLPDKAIDVLDTACARVAINLSSP 425 Query: 417 RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM-----------LVFGQDK 465 K+ + + R E+ + R + + L+ V Q + Sbjct: 426 PKQISALTTLSHQQEAEIRQLERELRIGLRTDTSRMTEVLEQYDETLSALDELEVAWQQQ 485 Query: 466 AIEALTEAIKMARAGLGHEH 485 + A++ G+ + Sbjct: 486 TLVQEIIALRQQLLGVAEDD 505 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 107/342 (31%), Positives = 173/342 (50%), Gaps = 7/342 (2%) Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V+ I +V+A +P +SQ++ + +L L + GQD AI +L + + AR Sbjct: 572 PHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPVWLGGTIKGQDLAIASLHKHLLTAR 631 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIG 535 A L +P+G+FL AGP+GVGKTE +QL++ L L +MSE+ E+HTVSRLIG Sbjct: 632 ADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIG 691 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 +PPGYVG+ +GG+LT+A+ + P++V+LLDE+EKAHPDV N+ Q D G + D GR D Sbjct: 692 SPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGEMADGEGRLID 751 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 +N+V +T+N G + + + + F P R+ ++ + LS Sbjct: 752 CKNIVFFLTSNLGYQVIVEHADDPETMQEA--LYPVLADFFKPALLARM-EVVPYLPLSK 808 Query: 656 DVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + + ++ + L L + G + + E + + + GAR + VI ++ Sbjct: 809 ETLATIIAGKLARLDNVLRSRFGADVIIGPEVTDEIMSRVTRAENGARMLESVIDGDMLP 868 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 PL+ LL + + L T + A A Sbjct: 869 PLSLLLLQKMAANTAIARIRLSAADGAFTADVEDALPDDAVT 910 >UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding subunit n=3 Tax=Burkholderia RepID=C5ALE8_BURGB Length = 933 Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats. Identities = 158/498 (31%), Positives = 242/498 (48%), Gaps = 35/498 (7%) Query: 5 ELELSLNMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELEAFI 62 L SL A ++ + ++ + H L L L++ + + C +D L ++L+ + Sbjct: 15 TLFRSLESATTFSKLRGNPYVELVHWLHQLIALADGDLQRIVRHCEIDRARLDRDLQDAL 74 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQS-SGRNEVTGANVLVAIFSEQESQAA 121 LP+ + + ++RA G + + GA ++ A+ E + Sbjct: 75 A----ALPSGAGSL-SDFSHHVDAAIERAWVLATLVFGEHRIRGAWLMAALIETPELRRV 129 Query: 122 YLLRKHEVSRLDVVNF--------ISHGTRKDEPTQSSD-----PGSQPNSEEQAGGEER 168 L E R+ V D P SD PG ++ Sbjct: 130 LLSCSREFGRIPVDGLHEALPAWIAGSPEADDTPYDHSDFSPAVPGEASDAMAAPARGSS 189 Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +E F +L A G IDP++GR+ E+ + VL RRR+NNPLL G++GVGKTA+ EGLA Sbjct: 190 LEQFCADLTARALKGEIDPVVGRDIEIRTMVDVLLRRRQNNPLLTGDAGVGKTAVVEGLA 249 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEI 287 I +GDVP +A+ + +LD+G+LLAG RG+FE R K++++ + ILFIDEI Sbjct: 250 LAIARGDVPPKLAEVRLLNLDVGALLAGASMRGEFEARLKSVIEAAGKAPVPVILFIDEI 309 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT+IGAG +G DAANL+KP L+ G +RVIG+TT+ E+ EKD AL RRFQ + + Sbjct: 310 HTLIGAGGQAGTG-DAANLLKPALARGTLRVIGATTWAEYKRHIEKDPALTRRFQVLQVA 368 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EP V ++ GL + HH V +AVRA+V L+ +Y+ R LPDKAI ++D A A Sbjct: 369 EPEPGAAVDMVRGLVGTFSRHHGVVVLDEAVRASVMLSHRYLPSRQLPDKAISLLDTACA 428 Query: 408 RA--RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF---- 461 R + + + + + E+ V D + + R+ L Sbjct: 429 RVALSQHAPPRELQYLRQQLEAARIESALLDAERRVGIGDGASWSEVAQRIAELEVQARD 488 Query: 462 ------GQDKAIEALTEA 473 Q +A+ AL EA Sbjct: 489 IEQAWQAQVEAVRALLEA 506 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 104/346 (30%), Positives = 175/346 (50%), Gaps = 10/346 (2%) Query: 399 IDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 + ++D + + V+ A + ++++ IP + + ++ L + L Sbjct: 557 LHLLDRQLRQLQGG-RPLVFPEVSEAMVAAIISDWTGIPVGRMVTDEIAAVRRLSETLSA 615 Query: 459 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---E 515 V GQ A+ + E I+ ARAGL KP+G FL GP+GVGKTE + L++AL Sbjct: 616 RVVGQTDALRQIAERIQTARAGLADPAKPLGVFLLTGPSGVGKTETALALAEALYGGEQN 675 Query: 516 LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFN 575 L+ +MSEY E HTVS L GAPPGYVG+ +GG+LT+AV + P++V+LLDEIEK+H DV Sbjct: 676 LITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKSHSDVKE 735 Query: 576 ILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET----ERKSIGLIHQDNSTDAMEE 631 + QV D G + D +GR DFRN +++T+N G +++ Sbjct: 736 MFFQVFDKGYMEDGDGRYIDFRNTTILLTSNVGAELLTSLCADEALAPESDALRMALGPV 795 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWL 690 + K F F R+ ++ F L+ + Q+ ++ + ++ D GV L + +++ Sbjct: 796 LLKAFPAAFLGRVT-VVPFRPLAQGSLVQIARLYLDRVARRMADHHGVELVYAPAVADYV 854 Query: 691 AEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 + + GAR M I+ +L L+ L + + + ++ Sbjct: 855 VARCLVQETGARLMIGFIEQHLLPALSRHWLDALISNRRLARIEIE 900 >UniRef50_B3QUJ2 ATPase AAA-2 domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUJ2_CHLT3 Length = 443 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 145/338 (42%), Positives = 211/338 (62%), Gaps = 12/338 (3%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K+ + DI VV++ IP + QS+R + N+ D L+ V GQ +AI A++EA+K A Sbjct: 106 KEDIESKDIADVVSKWTGIPVSKMLQSERQKILNIEDELRKRVIGQREAIHAVSEAVKRA 165 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLI 534 RAGL E +P+GSF+F G TGVGKTE+ L+ L ++R DMSEYME VSRL+ Sbjct: 166 RAGLSDEKRPIGSFIFLGTTGVGKTELARSLAAYLFNDEDAMVRIDMSEYMEAFNVSRLV 225 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++GG LT+AV + P +V+LLDEIEKAHPDVFNILLQV+D+G LTDN G Sbjct: 226 GAPPGYVGYEEGGQLTEAVRRKPFSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGHTV 285 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNST-------DAMEEIKKIFTPEFRNRLDNI 647 +FRN +++MT+N G + + L ++ T + ++K PEF NR+D Sbjct: 286 NFRNTIIIMTSNLGSHLIQEEMAKLTDENKETILPELRAKLFDLMRKSLRPEFLNRVDET 345 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 I F L+ + + Q+VD ++ ++ + L ++ EA+NWL + GYD GARP+ RV Sbjct: 346 ILFTPLTREDLKQIVDIQFERIRQTAQKQNILLRITDEAKNWLGQLGYDPHFGARPLKRV 405 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 +Q + LA ++L G + DG + + L E N+L + Sbjct: 406 MQRYITNELAEKILGGEVSDGDSIEIVL--ENNQLVFR 441 >UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M6_ORYSJ Length = 388 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 126/334 (37%), Positives = 193/334 (57%), Gaps = 4/334 (1%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V + VV+R IP ++ Q +++ L +L DRL V GQD+A++ + +A+ +RAG Sbjct: 18 VGPDHVAQVVSRWTGIPVTTLDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLRSRAG 77 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAP 537 L +P+GSFLF G TGVGKTE+ L++ L L+RFDMSE++ +V RLIGAP Sbjct: 78 LEQPGQPIGSFLFLGSTGVGKTELAKALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAP 137 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 P Y G GG LT+ V P++V+L DE+EKA P VFN+ LQ++D+G LTD GR DF+ Sbjct: 138 PSYHGHQDGGQLTEKVRTRPYSVILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFK 197 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTD-AMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 N +++MT+N G G + + D M++++K F PE NRL I+ F+ LS D Sbjct: 198 NTIIIMTSNLGAEHLTEGVTGERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHD 257 Query: 657 VIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPL 716 + +VV + + + KGVSL S +A + + + Y+ GARP+ R +Q N+ L Sbjct: 258 NLKEVVKIQMKSVVTSVAHKGVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKL 317 Query: 717 ANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 + L+ G G +++ +K L + + Sbjct: 318 SEMLITGDAGQGSTISIDATDDKKGLNFQVLKEE 351 >UniRef50_Q98IM7 Probable ClpA/B-type protease n=6 Tax=Rhizobiales RepID=Q98IM7_RHILO Length = 945 Score = 350 bits (899), Expect = 8e-95, Method: Composition-based stats. Identities = 148/498 (29%), Positives = 241/498 (48%), Gaps = 38/498 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLL--LALLSNPSAREALEACSVDLVALRQELE 59 LN + A A+ + ++ + H + L L + + +D+ L ++ Sbjct: 19 LNPTGLRAFKAAADTAKMRGNPYVELVHFVQQLVLSERSDVQMIVADAGLDVSRLTADMT 78 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I++ LP + F + + G EV A++L+A + Sbjct: 79 RAIDK----LPYGATSVEEFSDHIFHAIQEGWSLATLEFGVEEVRSAHILLACLKTPALE 134 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQA-----GGEERMENFTT 174 E ++D I+ E + + + E GG+ + + T Sbjct: 135 GLVSKISAEFDKIDADGVIARFADVTEGSLEAGSPPAAAAAETPMKRGLGGDSALAKYAT 194 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +L Q AR G IDP+IGR+ E+ + + +L RRR+NNP+L GE+GVGKTA+ EG A RI QG Sbjct: 195 DLTQRARDGKIDPVIGRDPEIRQIVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIAQG 254 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGA 293 DVP + + ++ LD+G + AG +G+FEKR KA++ +++ +T ILFIDE HT+IGA Sbjct: 255 DVPPTLQNVSVRMLDVGLMQAGASVKGEFEKRLKAVIDEVQASETPIILFIDEAHTLIGA 314 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 + G DAANL+KP L+ G++R I +TT+ E+ EKD AL RRFQ + I EPS Sbjct: 315 -GGAAGTGDAANLLKPALARGELRTIAATTWAEYKQHIEKDPALTRRFQVVKIEEPSETV 373 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 V ++ G+ E HH V+ +A+ A+V L+ +YI R LPDKA+ ++D A AR Sbjct: 374 AVLMLRGVAGVLEQHHKVQILDEAIEASVSLSHRYIPARQLPDKAVSLLDTACARV---- 429 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIE-ALTE 472 + A++E ++ R + ++ + G++ AI + + Sbjct: 430 --AVSQHATPAEVEDILRRRQAL------------------EVEEGIIGREAAIGIEVVD 469 Query: 473 AIKMARAGLGHEHKPVGS 490 AGL + + Sbjct: 470 RQARVEAGLAETETTLAA 487 Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats. Identities = 115/365 (31%), Positives = 179/365 (49%), Gaps = 13/365 (3%) Query: 395 PDKAIDV--IDEAGARAR--LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK 450 PD A D+ + E A +V+ + +VV IP + S + Sbjct: 582 PDSAADLARLRELMAELAEAQGETPLILPSVDRNAVAAVVQDWTGIPTGRMLSSQTEKAL 641 Query: 451 NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK 510 L L V GQD A+E + ++ +RAGLG KPVG FL GP+GVGKTE + L++ Sbjct: 642 KLAATLAERVVGQDHAMEMIARRVQTSRAGLGAPEKPVGVFLLCGPSGVGKTETALALAE 701 Query: 511 ALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIE 567 L L+ +MSE+ E HTVS L GAPPGYVG+ +GG+LT+AV + P++V+LLDE+E Sbjct: 702 TLYGGEQNLISINMSEFQEAHTVSTLKGAPPGYVGYGKGGILTEAVRRKPYSVILLDEVE 761 Query: 568 KAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK----SIGLIHQD 623 KAHPDV I QV D G + D+ GR+ DF+N ++++T+N G + ++ D Sbjct: 762 KAHPDVHEIFFQVFDKGMMDDSEGRRIDFKNTLILLTSNVGSEVIMDRTKNGTLRTGMDD 821 Query: 624 NSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEV 682 T + K+F F R+ I ++ LS +I + ++ +L L + Sbjct: 822 LDTALRGPLLKVFPAAFLGRVVTIPYY-PLSDAMIEAITRHQFGKIARRLKATNDAELVI 880 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 + + + + G R + ++ + L L+ +L SL V + Sbjct: 881 GDGVMDMVKARCTEIESGGRMIDAILTNTLLPELSRGVLNRSLEGKKMTKVTVGASSEGF 940 Query: 743 TYGFQ 747 TY F+ Sbjct: 941 TYSFE 945 >UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=Bacteria RepID=A9BLL0_DELAS Length = 928 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 158/517 (30%), Positives = 247/517 (47%), Gaps = 37/517 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 LN L SL A + + ++ + H L LL ++ L + L ++ Sbjct: 28 LNPLLFKSLEGATVFCKLRGNPYVELVHWLHQLLQENDCDLIRILRHFDIASDRLAADVL 87 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS-GRNEVTGANVLVAI------ 112 ++Q LP + + + ++R + +++ A +L + Sbjct: 88 RRLDQ----LPRGATSI-SDFSEHIETAIERGWVYATLMFNDSQIRSAYLLSGMVRTRSL 142 Query: 113 FSEQESQAAYLLRKHEVSRLDVVNFI------SHGTRKDEPTQSSDPGSQPNSEEQAGGE 166 +E S + + E + D + + D PG + A G+ Sbjct: 143 ANELRSISREFDKISEPALSDAFARLLPDSPEARMRAADGSGLEGTPGEASQATGAAPGQ 202 Query: 167 E-RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 ++ +T +L A+ G +DP+ GR+ E+ + + +L RRR+NNP+LVGE+GVGKTA+ E Sbjct: 203 GGALQQYTVDLTARAKAGELDPVTGRDDEVRQMVDILLRRRQNNPILVGEAGVGKTAVVE 262 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFI 284 GLA RI QGDVP + + LD+G L AG +G+FE R + LL ++ T +LFI Sbjct: 263 GLALRIAQGDVPPPLQGVELRVLDVGLLQAGASMKGEFENRLRGLLDAVQSSTTPIVLFI 322 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DE+HT++GAG +G DAANL+KP L+ G +R IG+TT+ E+ EKD AL RRFQ + Sbjct: 323 DEVHTLVGAGGQAGTG-DAANLLKPALARGTLRTIGATTWAEYKKYIEKDPALTRRFQLV 381 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EP V ++ G+ K E HH VR A AV AAV L+ +YI R LPDKA+ ++D Sbjct: 382 QVHEPDEPRAVDMLRGVAAKLENHHQVRIAADAVAAAVSLSHRYIPSRQLPDKAVSLLDT 441 Query: 405 AGARARLM-PVSKRKKTVNVADIESV-VARIARIPEKSVSQSDRDTLKNLGDRLK----- 457 A +R + + + IE++ V + + E ++ + L+ L L Sbjct: 442 ACSRVAMALHATPAQLEAVQRRIEALGVEQEVLLREAALGLPTAERLQALETDLASLRER 501 Query: 458 ----MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGS 490 FGQ+ A L I A L PV S Sbjct: 502 QATLAERFGQESA---LARRILETEAALMGLKPPVFS 535 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 100/331 (30%), Positives = 172/331 (51%), Gaps = 9/331 (2%) Query: 432 RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 IP + + + ++ +L D L+ V GQ +EA+T I+ +RA L KP+G F Sbjct: 599 EWTGIPVGRMVRDEVQSVLSLADTLEKRVIGQRHGLEAITRRIQTSRARLDDPGKPIGVF 658 Query: 492 LFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 L AGP+GVGKTE + L++AL L+ +MSE+ E HTVS L GAPPGYVG+ +GG+ Sbjct: 659 LLAGPSGVGKTETALSLAEALYGGEQNLITINMSEFQEAHTVSTLKGAPPGYVGYGEGGV 718 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT+AV + P++V+LLDEIEKAH DV + QV D G + D GR DF+N V+++T+N G Sbjct: 719 LTEAVRRRPYSVVLLDEIEKAHSDVHEMFFQVFDKGWMEDGEGRYIDFKNTVIILTSNVG 778 Query: 609 VRET----ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 + + + + + + F RL + ++ +S ++ Q++ Sbjct: 779 SDLIANMCRDPDLAPTPEGLAQAVRQPLLQTFPAALLGRLTVVPYY-PISDAMLEQIIRL 837 Query: 665 FIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFG 723 ++ +Q ++ ++ G + A + + + + GAR + ++ NL +A L Sbjct: 838 QMLRIQRRIEERHGAQFSFDEAAVDLVRRRCSEVESGARMVDGILTQNLLPRMATHFLQA 897 Query: 724 SLVDGGQVTVALDKEKNELTYGFQSAQKHKA 754 ++ ++ ++ T ++ A Sbjct: 898 TVEGQELQSLHAGASGDDFTLDVRTRAAEPA 928 >UniRef50_Q8SQU0 HSP 101 RELATED PROTEIN n=2 Tax=Apansporoblastina RepID=Q8SQU0_ENCCU Length = 851 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 140/462 (30%), Positives = 238/462 (51%), Gaps = 36/462 (7%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDL--VALRQEL 58 + + +L M A + + + EHLL A+LS+ ++ L + AL + + Sbjct: 7 TERAQNALKMCVDEALANNNNTIEPEHLLKAILSDQTSVLHNVLSPTERNNVKNALIKRI 66 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGR-NEVTGANVLVAIFSEQE 117 F +Q P E L + + +S G V+ +++++ + Sbjct: 67 GGFAKQYNCTEPRVGET------------LAKVLMAAESKGEGEYVSVNALVLSLLEVES 114 Query: 118 SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 + I++ + + + +S G + M F ++ Sbjct: 115 ----------------IRELIANSEDIRKKVEEQTKNKRFDSRNADDGTDVMSRFAVDMV 158 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 + AR DP+IGR++E+ R +++L ++ K+N +LVG+ GVGKTAI G+A I G+ P Sbjct: 159 EQARQNVFDPVIGRDEEIRRVLEILSKKTKSNAILVGKPGVGKTAIVNGIAQLIANGEAP 218 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + IY++D+GS++AGT +RGDFE+R K L+K+ E ILFIDEIH ++GAG Sbjct: 219 -TLRGARIYNVDVGSMVAGTSHRGDFEERLKTLVKEAETTPGVILFIDEIHIVLGAGKTD 277 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DAAN++KP L++G I+ IG+TT+ E+ E D A RRF ++ + EPSIE+++ + Sbjct: 278 GA-MDAANMLKPGLAAGTIKCIGATTHDEYRKYIENDPAFERRFVQVVVNEPSIEDSITM 336 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + GLK + EA+H V+ A+ AV + KYI++R LPD AID++D A A + S+ Sbjct: 337 LRGLKGRLEAYHGVKIADSAIVYAVNSSKKYISNRRLPDVAIDLLDTACASVMIALESEP 396 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRD-TLKNLGDRLKM 458 ++ +N + E +SQ + TLK L + ++ Sbjct: 397 QEILNQKSKAWGLDIAKTSLEFDLSQKKDEQTLKKLKEVVEE 438 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 184/781 (23%), Positives = 317/781 (40%), Gaps = 107/781 (13%) Query: 23 EFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTL 82 E+++V L+L+LL S RE + + +R+++E + +++ D Sbjct: 98 EYVSVNALVLSLLEVESIRELI----ANSEDIRKKVEEQTKNKRFDSRNADDGTDVMSRF 153 Query: 83 SFQRVLQRAVFHVQSSGRNEVTG--ANV--LVAIFSEQESQAAYLLRKHEVSRLDVVNFI 138 + V + + + V G + ++ I S++ A L+ K V + +VN I Sbjct: 154 AV-----DMVEQARQNVFDPVIGRDEEIRRVLEILSKKTKSNAILVGKPGVGKTAIVNGI 208 Query: 139 SHGTRKDE-PTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDP-LIGREKELE 196 + E PT + G +F L L + P +I E+ Sbjct: 209 AQLIANGEAPTLRGARIYNVDVGSMVAGTSHRGDFEERLKTLVKEAETTPGVILFIDEIH 268 Query: 197 RAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD---------CTIYS 247 + G GKT A A + G + Sbjct: 269 IVL-----------------GAGKTDGAMDAANMLKPGLAAGTIKCIGATTHDEYRKYIE 311 Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFI----DEIHTIIGAGAASGGQVDA 303 D FE+RF ++ +SI + + G A V A Sbjct: 312 NDPA-----------FERRFVQVVVNEPSIEDSITMLRGLKGRLEAYHGVKIADSAIVYA 360 Query: 304 ANLIKPLLSSGK---------------IRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 N K +S+ + + + + QE N K L ++ Sbjct: 361 VNSSKKYISNRRLPDVAIDLLDTACASVMIALESEPQEILNQKSKAWGLDIAKTSLEFD- 419 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH--------------- 393 S ++ Q + LK E V+ + + + A K+I + Sbjct: 420 LSQKKDEQTLKKLKEVVEELEKVKASLQPMEEAYLRDKKHIIEAKKLKKKLEDTKLRLAQ 479 Query: 394 ------------LPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSV 441 L I VI+ R L V + + + +++R I K + Sbjct: 480 AERDRNTYVAYDLKTNVIPVIESELKRLELESV----VVILPSHVAEIISRWTGIDVKRL 535 Query: 442 SQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGK 501 + + + L + R+K +FGQD A++A+ ++I +R GL + +PVGSFL GPTGVGK Sbjct: 536 TIKENERLMEMSSRIKKRIFGQDHAVDAIVDSILQSRVGLDDDDRPVGSFLLLGPTGVGK 595 Query: 502 TEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPH 558 TE+ ++ L ++L DMSEY +++LIGA GYVG++QGG LT+ + P+ Sbjct: 596 TELAKAVAMELFDNEKDMLVIDMSEYGNEMGITKLIGANAGYVGYNQGGTLTEPIKGRPY 655 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG 618 V+LLDE++ AH V N L Q++D G +TD G DFRN V++MT+N G R S G Sbjct: 656 NVILLDEVDLAHQTVLNTLYQLLDEGRVTDGKGAVVDFRNCVVIMTSNLGQEIIMR-SRG 714 Query: 619 LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV 678 ++ D E + F F NR+D +++F++L + +H++++ + L+ +L +G+ Sbjct: 715 ELNDDERKKIEEIVLNRFGAPFVNRIDEVLYFNNLDRENMHRILEYQMGYLEKKLRGRGI 774 Query: 679 SLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 + +VS + + K GAR + R I+ + K+ L LL D +V+ E Sbjct: 775 TFKVSDAVKEDMVTKVLSSIYGARQLRRFIRSSFKRALTKVLLMRVNEDPIEVSCTHPSE 834 Query: 739 K 739 Sbjct: 835 G 835 >UniRef50_B3EPU4 ATPase AAA-2 domain protein n=4 Tax=Chlorobiaceae RepID=B3EPU4_CHLPB Length = 440 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 135/337 (40%), Positives = 214/337 (63%), Gaps = 12/337 (3%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 K+ ++ DI +V++ IP + QS+R L + L V GQDKA++A++EA+K + Sbjct: 101 KEEIDAGDIADIVSKWTGIPVSKMLQSERQKLLLIDQELHKRVIGQDKAVQAVSEAVKRS 160 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 RAG+G E +P+GSF+F GPTGVGKTE+ L++ L + ++R DMSEYME H+VSRL+ Sbjct: 161 RAGMGDEKRPIGSFIFLGPTGVGKTELARTLAEYLFDDEDAMIRIDMSEYMESHSVSRLV 220 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGY+G+++GG LT+AV + P +V+LLDEIEKAHPDVFNILLQ++D+G LTD+ G Sbjct: 221 GAPPGYIGYEEGGQLTEAVRRRPFSVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGHTV 280 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE--------IKKIFTPEFRNRLDN 646 +F+N +++MT+N G + + + + + +N +E +K+ PEF NR+D Sbjct: 281 NFKNTIIIMTSNIGAQLIQSE-MEKMDGENRDAVLETLQDKLFLLLKQQVKPEFLNRIDE 339 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 +I F L+ + ++V + ++ +SL + A WL+ G+D A GARP+ R Sbjct: 340 VILFTPLTRKDLEKIVTIQFNSINKLALRQNISLHLDDSALTWLSNAGFDPAFGARPLKR 399 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 V+Q ++ L+ +L G++ +G V V ++ + L Sbjct: 400 VMQRSITNKLSEMILEGTVREGDSVQVTVEHGELSLV 436 >UniRef50_B9K2G7 ATP-dependent Clp protease ATP-binding subunit n=1 Tax=Agrobacterium vitis S4 RepID=B9K2G7_AGRVS Length = 903 Score = 350 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 156/464 (33%), Positives = 250/464 (53%), Gaps = 14/464 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 L L ++L A + A H + + HLL A++ S + LE + + ALR+E+ Sbjct: 13 LEPNLRVALETAASTAAGRGHGQVDIAHLLAAVMDAASFQPVLEQLGLPIAALRREVSDA 72 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 ++ T V+ S + +Q L+ R + + SGR +T A++ A+ E +A Sbjct: 73 LDDT--VVSGSGQLALSQNILTLGR--EAWICASLQSGRRAITLADIFAAMDDEPSLRAL 128 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 R + LD + + D ++ P S + +E + +T +L + AR Sbjct: 129 TRGRFPSLRMLDRT-ALETLLQTDVVAETPKSSLSPASVRE---DEFLRLYTHDLTEDAR 184 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G +DP++GR+ EL + I +L RRR+NNP+LVGE+GVGKTA+AE LA I G VPE + Sbjct: 185 AGRLDPVVGRDGELRQMIDILLRRRQNNPILVGEAGVGKTAVAEALALEIAAGRVPEKLQ 244 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGAASGGQ 300 + LD+ L AG +G+FE+R +++ +++ ILFIDE H +IGAG AS GQ Sbjct: 245 SVRLLMLDLTLLQAGAGVKGEFERRLTGVIEAVKRSPEPIILFIDEAHGLIGAGGAS-GQ 303 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 DAAN++KP L+ G++R I +TT+ E+ FEKD AL RRFQ + + EP E ++++ G Sbjct: 304 GDAANILKPALARGEVRTIAATTWSEYKKYFEKDAALTRRFQPVHVREPDEETAIRMLRG 363 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA----RLMPVSK 416 + + AHH V+ +A+ AAV+L+ +++ R LPDKA+ +ID A A + +P Sbjct: 364 IAETFMAHHGVKIRDEAIVAAVQLSARFLPARQLPDKAVSLIDTAAATVSLARQTVPEQL 423 Query: 417 RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 +A + +AR PE + Q R + +RL + Sbjct: 424 LLLKSELAHLTVETDWLAREPENTDVQERRQAVTTEMERLAKEI 467 Score = 258 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 121/356 (33%), Positives = 184/356 (51%), Gaps = 13/356 (3%) Query: 413 PVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTE 472 V+ + +V+AR IP + ++ K+L RLK V GQD A+E + + Sbjct: 531 EEKLVPHEVDRNVVAAVLARWTGIPLGKLLADQIESAKSLDMRLKEKVIGQDAALERIGD 590 Query: 473 AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHT 529 A++ ARAGL +P F+ G +G GKTE + L+ + L +MSE+ E H Sbjct: 591 AMRAARAGLSDPRRPPAVFMLVGMSGTGKTETALTLADLMYGGSQHLTTINMSEFKEEHK 650 Query: 530 VSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDN 589 VS L+GAPPGYVG+ +GG+LT+AV + P+ VLLLDEI+KAHP V +I QV D G L D Sbjct: 651 VSMLLGAPPGYVGYGEGGVLTEAVRRRPYGVLLLDEIDKAHPGVQDIFYQVFDKGMLRDG 710 Query: 590 NGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD----AMEEIKKIFTPEFRNRLD 645 GR DFRN + MT N G ++ M E++K F P F R Sbjct: 711 EGRDVDFRNTTIFMTANTGSELLASLALDPDTMPEGEALEALLMPELQKQFKPAFLGR-T 769 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 ++ F L + + ++VD I ++ ++ G L +S+EARN L + +GAR + Sbjct: 770 LLLPFMPLGKEALSRIVDIQINRIRERIFSAYGTELALSEEARNALVGRAVASEIGARAI 829 Query: 705 ARVIQDNLKKPLANELLFGSLVDGGQVT---VALDKEKNELTYGFQSAQKHKAEAA 757 +I +L PL++ L + G +VT V D++ + G ++ A+A+ Sbjct: 830 EIMIGRDLLPPLSSFFL-ELVASGAKVTEALVTHDEKGFGVRAGAAGEKEEFADAS 884 >UniRef50_UPI000194EB59 PREDICTED: hypothetical protein, partial n=1 Tax=Taeniopygia guttata RepID=UPI000194EB59 Length = 480 Score = 347 bits (890), Expect = 9e-94, Method: Composition-based stats. Identities = 148/435 (34%), Positives = 240/435 (55%), Gaps = 35/435 (8%) Query: 324 YQEFSNIFEKDRALARRFQ--KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAA 381 +E++ ++ ++ L R Q KIDI + + +EA R A A Sbjct: 66 EKEYTAKWKAEKDLIDRIQQNKIDIEQLN--------------FEADRAEREGDYAKVAE 111 Query: 382 VELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSV 441 + + ++ + + + + K+ V+ DI VV+R IP + Sbjct: 112 IRYSKVQAKEKENAEIQEQL------KIMQGEKALIKEEVDAEDIADVVSRWTGIPVNKM 165 Query: 442 SQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGK 501 QS+++ L +L L V GQ+ AI A+ +A++ +RAGL +P+GSF+F G TGVGK Sbjct: 166 VQSEKEKLLHLEAELHQRVVGQEDAIRAIADAVRRSRAGLNDPRRPIGSFIFLGTTGVGK 225 Query: 502 TEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPH 558 TE+ L++ L + + R DMSEY E+H+VSRL+GAPPGYVG+++GG LT++V + P+ Sbjct: 226 TELAKALAEYLFDDENMMTRIDMSEYQEKHSVSRLVGAPPGYVGYEEGGQLTESVRRKPY 285 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG 618 V+L DEIEKAHPD FNILLQV+D+G LTDN GR +F+N +++MT+N G + Sbjct: 286 QVVLFDEIEKAHPDTFNILLQVLDDGRLTDNKGRNVNFKNTIIIMTSNMGSQLIRENFSK 345 Query: 619 LIHQ-------DNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQV 671 L Q + +E +K+ PEF NR+D II F L+ I ++V + +Q Sbjct: 346 LTPQNKPKVVEETKAQVLEMLKENIRPEFLNRIDEIIMFTPLNRTEIEEIVGLQLHSIQR 405 Query: 672 QLDQ-KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ 730 L + G+ L+++ +A ++LA++GYD GARP+ R I + L+ ++L + Sbjct: 406 MLQKSSGIELKITPKALSYLADEGYDPEFGARPVKRAIHRLVLNQLSKDILAQKVDRSHP 465 Query: 731 VTVALDKEKNELTYG 745 +T+ + E ++L + Sbjct: 466 ITIDV--ENDDLVFR 478 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 T... 723 0.0 UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organism... 711 0.0 UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n... 704 0.0 UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit ... 704 0.0 UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomyceta... 701 0.0 UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ... 700 0.0 UniRef50_D1Y107 Negative regulator of genetic competence ClpC/Me... 699 0.0 UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n... 689 0.0 UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY 688 0.0 UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacte... 688 0.0 UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ... 686 0.0 UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular or... 686 0.0 UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=V... 682 0.0 UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Sacchar... 676 0.0 UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit C... 671 0.0 UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ... 669 0.0 UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ... 669 0.0 UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteri... 668 0.0 UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogace... 668 0.0 UniRef50_P37571 Negative regulator of genetic competence clpC/me... 667 0.0 UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogace... 666 0.0 UniRef50_C9KP02 Negative regulator of genetic competence ClpC/Me... 664 0.0 UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit c... 658 0.0 UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit ... 658 0.0 UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit c... 658 0.0 UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 ... 655 0.0 UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/Dna... 654 0.0 UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 652 0.0 UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=... 651 0.0 UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mami... 651 0.0 UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ... 650 0.0 UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit c... 647 0.0 UniRef50_C7HWH6 Negative regulator of genetic competence MecB/cl... 646 0.0 UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n... 645 0.0 UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ... 644 0.0 UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 644 0.0 UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subu... 643 0.0 UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 643 0.0 UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit c... 641 0.0 UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicoba... 639 0.0 UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/me... 639 0.0 UniRef50_C9PUC6 ATP-dependent Clp protease subunit n=1 Tax=Prevo... 639 0.0 UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecali... 637 0.0 UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/Dna... 637 0.0 UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Tr... 634 e-180 UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/Me... 634 e-180 UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/Me... 634 e-180 UniRef50_A4W448 ATPases with chaperone activity, ATP-binding sub... 633 e-180 UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum Rep... 631 e-179 UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Ta... 631 e-179 UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding sub... 630 e-179 UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD 630 e-179 UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiale... 630 e-179 UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HL... 630 e-179 UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subu... 626 e-177 UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma ... 625 e-177 UniRef50_D1PH53 ATP-dependent Clp protease, ATP-binding subunit ... 624 e-177 UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ... 624 e-177 UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collins... 624 e-177 UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subu... 622 e-176 UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding ... 622 e-176 UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular or... 621 e-176 UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular or... 621 e-176 UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain,... 621 e-176 UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding ... 618 e-175 UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae... 617 e-175 UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma ... 616 e-175 UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria Rep... 616 e-174 UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosipho... 616 e-174 UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Tr... 614 e-174 UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Per... 612 e-173 UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit C... 611 e-173 UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/Me... 611 e-173 UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas Re... 609 e-172 UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ... 609 e-172 UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens ... 608 e-172 UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding s... 606 e-172 UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bactero... 604 e-171 UniRef50_Q9ZN31 ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT n=17 ... 601 e-170 UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Can... 589 e-166 UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subu... 589 e-166 UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japo... 587 e-166 UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71... 586 e-166 UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 586 e-165 UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit c... 584 e-165 UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=... 584 e-165 UniRef50_A7I2C9 ATP-dependent CLP protease ATP-binding subunit n... 583 e-165 UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bige... 582 e-164 UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ... 582 e-164 UniRef50_A5UYN2 ATPase AAA-2 domain protein n=1 Tax=Roseiflexus ... 576 e-162 UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiale... 575 e-162 UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit c... 574 e-162 UniRef50_A0RNV1 ATP-dependent Clp protease ATP-binding subunit C... 572 e-161 UniRef50_C8PIY8 ATP-dependent CLP protease ATP-binding subunit n... 570 e-161 UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR 570 e-161 UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Rumin... 569 e-160 UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,... 569 e-160 UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Ples... 567 e-160 UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=C... 565 e-159 UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomo... 565 e-159 UniRef50_D1Z247 ATP-dependent Clp protease ATP-binding subunit C... 564 e-159 UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ... 560 e-158 UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, s... 557 e-157 UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malasse... 557 e-157 UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit c... 555 e-156 UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax... 554 e-156 UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit c... 547 e-154 UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 545 e-153 UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit C... 540 e-152 UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacteri... 538 e-151 UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma ... 536 e-150 UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conex... 527 e-148 UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides ... 526 e-147 UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii... 517 e-145 UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus Re... 517 e-145 UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza s... 515 e-144 UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1... 503 e-140 UniRef50_Q7RAR9 ATP-dependent Clp protease, ATPase subunit-relat... 497 e-138 UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga... 487 e-136 UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba d... 485 e-135 UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CL... 483 e-135 UniRef50_C3RJA5 ATPase n=3 Tax=Bacteria RepID=C3RJA5_9MOLU 465 e-129 UniRef50_C2EIG8 ATP-dependent Clp protease n=4 Tax=Lactobacillal... 463 e-129 UniRef50_C0SQM4 Putative ATP-dependent Clp protease n=1 Tax=Lact... 461 e-128 UniRef50_A6EIG8 Putative ATP-dependent protease n=1 Tax=Pedobact... 456 e-126 UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two... 456 e-126 UniRef50_A3CKB2 ATPase with chaperone activity, ATP-binding subu... 453 e-126 UniRef50_B5RQH1 ATP-dependent Clp protease, subunit C n=24 Tax=B... 451 e-125 UniRef50_Q0SNE4 ATP-dependent Clp protease, subunit A n=22 Tax=B... 449 e-124 UniRef50_Q1WR72 ATP-dependent Clp protease n=2 Tax=Lactobacillus... 445 e-123 UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/Me... 442 e-122 UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=... 436 e-120 UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escheri... 436 e-120 UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococc... 433 e-119 UniRef50_B5RLQ8 ATP-dependent Clp protease, subunit A n=1 Tax=Bo... 432 e-119 UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F... 430 e-119 UniRef50_A5FES3 ATPase AAA-2 domain protein n=1 Tax=Flavobacteri... 423 e-116 UniRef50_UPI00016B2080 clp protease ATP binding subunit n=4 Tax=... 411 e-113 UniRef50_Q7NHQ2 ATP-dependent protease ATP-binding subunit n=1 T... 411 e-113 UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 ... 409 e-112 UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms... 407 e-111 UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atr... 404 e-111 UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n... 404 e-111 UniRef50_Q1D2Y8 ClpA/B family protein n=1 Tax=Myxococcus xanthus... 397 e-109 UniRef50_B9Y438 Putative uncharacterized protein n=1 Tax=Holdema... 397 e-109 UniRef50_UPI00016C3DF7 ATPase with chaperone activity, ATP-bindi... 396 e-108 UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organis... 394 e-108 UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidob... 392 e-107 UniRef50_A6GDL3 ClpA/B family protein n=1 Tax=Plesiocystis pacif... 391 e-107 UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepI... 390 e-107 UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA 388 e-106 UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. S... 387 e-106 UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular orga... 386 e-105 UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=C... 384 e-105 UniRef50_B0SCX5 Endopeptidase Clp, ATP-dependent proteolytic sub... 382 e-104 UniRef50_UPI0001744445 ClpA/B family protein n=1 Tax=Verrucomicr... 382 e-104 UniRef50_UPI00016C3DF8 ATPase with chaperone activity, ATP-bindi... 379 e-103 UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subu... 379 e-103 UniRef50_Q9MTD7 Clp n=136 Tax=Apicomplexa RepID=Q9MTD7_TOXGO 379 e-103 UniRef50_A1ZTB7 Chaperone ClpB, putative n=1 Tax=Microscilla mar... 379 e-103 UniRef50_Q7YN63 Clp protease ATP-binding subunit n=5 Tax=Apicomp... 378 e-103 UniRef50_UPI0001744446 ATPase with chaperone activity, ATP-bindi... 378 e-103 UniRef50_Q1D2Y7 ClpA/B family protein n=1 Tax=Myxococcus xanthus... 377 e-103 UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales Re... 376 e-102 UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organis... 375 e-102 UniRef50_Q1D2Y9 ClpB family protein n=1 Tax=Myxococcus xanthus D... 374 e-101 UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organism... 373 e-101 UniRef50_UPI00016C3DF6 ATPase with chaperone activity, ATP-bindi... 373 e-101 UniRef50_UPI0001746BB9 ATPase with chaperone activity, ATP-bindi... 372 e-101 UniRef50_A8RF26 Putative uncharacterized protein n=1 Tax=Eubacte... 371 e-101 UniRef50_A1ZCV4 ATPases with chaperone activity ClpC, two ATP-bi... 370 e-101 UniRef50_UPI000185C840 putative chaperone protein n=1 Tax=Capnoc... 370 e-100 UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 T... 369 e-100 UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=... 369 e-100 UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI 368 e-100 UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellu... 368 e-100 UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces svic... 367 e-100 UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q... 367 e-100 UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms Rep... 366 2e-99 UniRef50_A1ZYY8 ATP-dependent Clp protease, ATP-binding subunit ... 365 4e-99 UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria Rep... 364 6e-99 UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 T... 364 7e-99 UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatro... 363 2e-98 UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candida... 361 5e-98 UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=P... 361 6e-98 UniRef50_A6GDL5 ClpA/B family protein n=1 Tax=Plesiocystis pacif... 361 8e-98 UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=C... 360 1e-97 UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria... 360 2e-97 UniRef50_Q03X61 ATP-binding subunit of Clp protease and DnaK/Dna... 359 3e-97 UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 R... 358 5e-97 UniRef50_A9AVM3 ATPase AAA-2 domain protein n=1 Tax=Herpetosipho... 357 7e-97 UniRef50_Q2SB13 ATPase with chaperone activity, ATP-binding subu... 357 7e-97 UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp... 357 9e-97 UniRef50_A9GQS7 ATP-dependent Clp protease, ATP-binding subunit ... 357 1e-96 UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subu... 356 2e-96 UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organ... 356 2e-96 UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organis... 356 3e-96 UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 Rep... 356 3e-96 UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 355 5e-96 UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=S... 354 1e-95 UniRef50_A9ERV8 ATP-dependent Clp protease, ATP-binding subunit,... 353 1e-95 UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria ... 352 3e-95 UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria R... 352 3e-95 UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=... 352 4e-95 UniRef50_Q1DC82 ClpA/B family protein n=2 Tax=Cystobacterineae R... 351 5e-95 UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterob... 351 5e-95 UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=... 351 7e-95 UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi... 351 7e-95 UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q... 351 8e-95 UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCM... 349 2e-94 UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subu... 349 3e-94 UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding sub... 348 5e-94 UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Pro... 347 6e-94 UniRef50_Q2SB14 ATPase with chaperone activity, ATP-binding subu... 347 8e-94 UniRef50_Q8NPQ1 ATPases with chaperone activity, ATP-binding sub... 347 9e-94 UniRef50_A6GDL2 ClpA/B family protein n=1 Tax=Plesiocystis pacif... 347 9e-94 UniRef50_D2KTB1 BC18 (Fragment) n=1 Tax=Babesia caballi RepID=D2... 347 1e-93 UniRef50_Q2SB15 ATPase with chaperone activity, ATP-binding subu... 347 1e-93 UniRef50_A6G5U6 AAA ATPase n=1 Tax=Plesiocystis pacifica SIR-1 R... 346 2e-93 UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=... 346 2e-93 UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding sub... 346 2e-93 UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular org... 346 3e-93 UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=G... 344 7e-93 UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteo... 342 4e-92 UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=... 341 5e-92 UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostr... 340 9e-92 UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B... 340 1e-91 UniRef50_A7APH1 Clp amino terminal domain containing protein n=1... 340 1e-91 UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 ... 339 2e-91 UniRef50_C6HYE9 ATPase AAA-2 domain protein n=1 Tax=Leptospirill... 339 2e-91 UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter ... 339 3e-91 UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN 338 4e-91 UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=... 338 5e-91 UniRef50_C9XYK6 Chaperone protein clpB n=1 Tax=Cronobacter turic... 337 7e-91 UniRef50_Q98IM7 Probable ClpA/B-type protease n=6 Tax=Rhizobiale... 337 1e-90 UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ... 337 1e-90 UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium... 336 2e-90 UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus ... 335 4e-90 UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_E... 335 5e-90 UniRef50_Q9I742 Protein clpV1 n=17 Tax=Proteobacteria RepID=CLPV... 333 2e-89 UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M... 333 2e-89 UniRef50_Q25823 Clp (C?) protein n=14 Tax=Haemosporida RepID=Q25... 333 2e-89 UniRef50_A9FG71 ATPase with chaperone activity, two ATP-binding ... 332 2e-89 UniRef50_B1GUR2 ATP-dependent Clp protease-like protein n=1 Tax=... 332 3e-89 UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organ... 332 3e-89 UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mut... 332 3e-89 UniRef50_B5FRR8 Chaperone protein clpB n=19 Tax=Gammaproteobacte... 331 7e-89 UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ... 330 9e-89 UniRef50_D2QZM9 Type VI secretion ATPase, ClpV1 family n=6 Tax=B... 330 1e-88 UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmod... 329 2e-88 Sequences not found previously or not previously below threshold: >UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 Tax=cellular organisms RepID=B0JIB9_MICAN Length = 795 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 307/771 (39%), Positives = 465/771 (60%), Gaps = 40/771 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE--ALEACSVDLVALRQELE 59 NQ+ ++ A AR H + EHLLL L+ +A L+ V L R+ +E Sbjct: 5 FNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDLKVTLHESRRLIE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + T P + T +++ ++A + G N + ++L+AI S+ ES Sbjct: 65 GMTGRGTGYSPV-----NIPFTPKAKKMFEQAFQEARQLGENAIATEHLLLAITSDPESL 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L V + + + + + S ++ A + + NLNQ Sbjct: 120 AAKILIMQGVDLIKLRGLLIKNAGEKVASGRFTAKSDYEDQKNAPQGGILAQYGRNLNQE 179 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 + G IDP+IGRE E+ER +Q+L RR K+NP+L+GE GVGKTAIAEGLA RI GD+PE+ Sbjct: 180 VKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGEPGVGKTAIAEGLAQRIHNGDIPEL 239 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D + +LD+GSLLAGT++RGDFE+R K +++++ + N ILFIDEIHT++GAG + GG Sbjct: 240 LQDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKSGNIILFIDEIHTLVGAG-SMGG 298 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA+NL+KP L+ G+++ +G+TT E+ E+D AL RRFQ + + EP+ E+ ++I+ Sbjct: 299 AMDASNLLKPALARGELQCLGATTLDEYKRHIERDAALERRFQPVMVGEPTKEQAIEILR 358 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM------- 412 GLK YE H V+Y KA+ AAV L+ +YINDR LPDKAID++DEAG+R L Sbjct: 359 GLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRTHLRYSLQSTS 418 Query: 413 -----------PVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF 461 V+ +I +VA IP +++++ ++L NL +L + Sbjct: 419 PAEVREESPLINPESLIPVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERII 478 Query: 462 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLR 518 GQ +A+ A++ AI+ AR L + ++P+ SF+FAGPTGVGKTE+T L+K L ++R Sbjct: 479 GQQEAVNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIR 538 Query: 519 FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL 578 DMSE+ME HTVS+LIGAPPGY+G+++GG LT+AV + P+ V+L DEIEKAHPDVFN+LL Sbjct: 539 LDMSEFMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLL 598 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER--KSIGL---------IHQDNSTD 627 Q++++G LTD+ GR+ DF+N +++MT+N G + E+ S+G +Q S Sbjct: 599 QLLEDGHLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNR 658 Query: 628 AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEAR 687 EE+K+ F PEF NRLD II F L+ + + Q+ D I +L QL +KG+S+EV+ + Sbjct: 659 VTEELKQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFK 718 Query: 688 NWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 + + +GYD + GARP+ R + L+ LA +L G + G + + E Sbjct: 719 DLVINEGYDPSYGARPLRRALTRRLEDSLAVAMLSGKVNSGDHAILDVTAE 769 Score = 42.9 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 32/87 (36%) Query: 79 QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFI 138 + + A + +G + V ++L+ + E + AA +L+ +V+ + I Sbjct: 4 YFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDLKVTLHESRRLI 63 Query: 139 SHGTRKDEPTQSSDPGSQPNSEEQAGG 165 T + + P +++ Sbjct: 64 EGMTGRGTGYSPVNIPFTPKAKKMFEQ 90 >UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organisms RepID=CLPA_RHOBL Length = 793 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 437/740 (59%), Positives = 557/740 (75%), Gaps = 9/740 (1%) Query: 20 HRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 RHE T+EHLLLAL+ P A ++ACSVDL L++ L FI+ L S E + Sbjct: 43 RRHELATLEHLLLALIDEPDAARVMKACSVDLEDLKKTLTDFIDDDLSTLVTSVEGSEAV 102 Query: 80 PTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFIS 139 PT +FQRV+QRA HVQSSGR EVTGANVLVAIF+E+ES AAY L++ +++R D VNFI+ Sbjct: 103 PTAAFQRVIQRAAIHVQSSGRTEVTGANVLVAIFAERESNAAYFLQEQDMTRYDAVNFIA 162 Query: 140 HGTRKDEPTQSS-------DPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGRE 192 HG KD S +P P +E E + + +LN AR G +DPLIGRE Sbjct: 163 HGVAKDPSYGESRPVQGADEPQETPKAEAGEAKESALSKYCVDLNIKARKGDVDPLIGRE 222 Query: 193 KELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS 252 E+ERAIQVLCRRRKNNPLLVG+ GVGKTAIAEGLAW+I++ +VPEV++ TI+SLD+G+ Sbjct: 223 AEVERAIQVLCRRRKNNPLLVGDPGVGKTAIAEGLAWKIIKKEVPEVLSGATIFSLDMGA 282 Query: 253 LLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS 312 LLAGT+YRGDFE+R KA++K+LE ++ILFIDEIHT+IGAGA SGG +DA+NL+KP L Sbjct: 283 LLAGTRYRGDFEERLKAVVKELEDHPDAILFIDEIHTVIGAGATSGGAMDASNLLKPALQ 342 Query: 313 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVR 372 GK+R +GSTTY+EF FEKDRAL+RRFQKID+ EPS+ + ++I+ GLKP +E HH++R Sbjct: 343 GGKLRCMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVPDAIKILMGLKPHFEEHHELR 402 Query: 373 YTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVAR 432 YTA A+++AVELA +YINDR LPD AIDVIDEAGA L+ SKRKK + +IE+VVA+ Sbjct: 403 YTADAIKSAVELASRYINDRKLPDSAIDVIDEAGAAQHLVSDSKRKKVLGTKEIEAVVAK 462 Query: 433 IARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFL 492 IARIP ++VS+ D +TL++L LK LVFGQDKAIEAL+ +IK+ARAGL KP+G++L Sbjct: 463 IARIPPRNVSKDDAETLRDLERTLKRLVFGQDKAIEALSASIKLARAGLREPEKPIGNYL 522 Query: 493 FAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 F GPTGVGKTEV QL+ LG+ELLRFDMSEYME+H VSRLIGAPPGYVGFDQGG+LTD Sbjct: 523 FTGPTGVGKTEVAKQLAATLGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGMLTDG 582 Query: 553 VIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET 612 V +HPH VLLLDEIEKAHPDV+NILLQVMD+G LTD+NGR DFRNV+L+MT+N G + Sbjct: 583 VDQHPHCVLLLDEIEKAHPDVYNILLQVMDHGKLTDHNGRAVDFRNVILIMTSNVGAADM 642 Query: 613 ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ 672 +++IG + + + +++ FTPEFRNRLD +I F L ++I QVV+KF+++L+ Q Sbjct: 643 AKEAIGFGRERRTGEDTAAVERTFTPEFRNRLDAVISFAPLGREIILQVVEKFVLQLEAQ 702 Query: 673 LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVT 732 L + V +E++ EA WL EKGYD MGARP+ RVIQ+++KKPLA ELLFG L GG V Sbjct: 703 LIDRNVHIELTPEAAAWLGEKGYDDKMGARPLGRVIQEHIKKPLAEELLFGKLTKGGLVK 762 Query: 733 VALDKEKNELTYGFQSAQKH 752 V + + + Q QK Sbjct: 763 VGVKDD--AIVLEVQEPQKP 780 >UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n=21 Tax=Bacteria RepID=C8NK17_COREF Length = 927 Score = 704 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 303/854 (35%), Positives = 455/854 (53%), Gaps = 105/854 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + +A AR H ++ EH+LL L+ A +ALE+ + L A+RQE+E Sbjct: 5 FTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVRQEVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + T ++VL+ ++ G + +L+ + E E Sbjct: 65 EIIGHGSK-----PTTGHIPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGV 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGS--------------------QPNS 159 AA +L K V + E Q P S + Sbjct: 120 AAQVLVKLGADLPRVRQQVIQLLSGYEGGQGGSPDSPQGGQGGDAVGAGSAPGGRATGSG 179 Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 + ++ F NL Q A+ G +DP++GR+KE+ER +QVL RR KNNP+L+GE GVG Sbjct: 180 AGERSNSLVLDQFGRNLTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVG 239 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN 279 KTA+ EGLA IV G VPE + D +YSLD+GSL+AG++YRGDFE+R K +LK++ Q + Sbjct: 240 KTAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGD 299 Query: 280 SILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 ILFIDEIHT++GAGAA G +DAA+L+KP L+ G+++ IG+TT E+ EKD AL R Sbjct: 300 IILFIDEIHTLVGAGAAEGA-IDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALER 358 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 399 RFQ + + EPS+E +++I+ GL+ +YEAHH V T A+ AA +L+ +YINDR LPDKA+ Sbjct: 359 RFQPVQVPEPSVELSIEILKGLRDRYEAHHRVSITDGALVAAAQLSDRYINDRFLPDKAV 418 Query: 400 DVIDEAGARARLMPVSKRKKTVNVADIESVVARIAR------------------------ 435 D+IDEAGAR R+ ++ + V + + V R Sbjct: 419 DLIDEAGARMRIKRMTAPESLREVDERIADVRREKEAAIDAQDFEKAAGLRDKERKLGEE 478 Query: 436 --IPEKSVSQSDRDTLKNLGDRLKMLV-------------------------------FG 462 EK D + + +G+ V G Sbjct: 479 RAEKEKQWRSGDLEEIAEVGEEQIAEVLATWTGIPVFKLTEAESSRLLNMEEELHKRIIG 538 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRF 519 QD+A++A++ AI+ RAGL +P GSF+FAGP+GVGKTE++ L++ L + L++ Sbjct: 539 QDEAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLIQI 598 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DM E+ +R T SRL GAPPGYVG+++GG LT+ V + P +V+L DEIEKAH +++N LLQ Sbjct: 599 DMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQ 658 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK-----------SIGLIHQDNSTDA 628 V+++G LTD GR DF+N VL+ T+N G ++ + + Sbjct: 659 VLEDGRLTDGQGRIVDFKNTVLIFTSNLGTQDISKAVGLGFSGSNETDSDAQYDRMKNKV 718 Query: 629 MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARN 688 +E+KK F PEF NR+D I+ F L+ + I Q+V+ I + L K + +E++ +A+ Sbjct: 719 HDELKKHFRPEFLNRIDEIVVFHQLTREQIIQMVELLIGRVSRALADKDMGIELTDKAKA 778 Query: 689 WLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD------KEKNEL 742 LA +G+D +GARP+ R IQ ++ ++ ++LFG + G VTV +D K + Sbjct: 779 LLASRGFDPVLGARPLRRTIQREIEDAMSEKILFGEIGAGEIVTVDVDGWDGESKNTDGA 838 Query: 743 TYGFQSAQKHKAEA 756 T+ F K + Sbjct: 839 TFTFTPRPKPLPDG 852 >UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J0Q4_DESDA Length = 832 Score = 704 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 388/762 (50%), Positives = 533/762 (69%), Gaps = 22/762 (2%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 ML++ ++ + A A RH+ +TVEH+L AL ++ R LE + LR++LE Sbjct: 1 MLSKSVQSVIRDALMEAHRRRHDMLTVEHVLYALTNSMRGRILLEGSGASVAVLREQLED 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F + V+P + + + T QRVL+RA+ H++++GR+ V ++L++I E+ES A Sbjct: 61 FFNRELEVVPLAG-KHEVAQTEGVQRVLERALGHIRAAGRDTVELGDLLISIMDEEESYA 119 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 Y LRK V RLDV+ F+SHG + ++ D G + EE+ + + + +L A Sbjct: 120 HYYLRKQGVERLDVLTFVSHGMDEGGGSRGVDQGGEG--EEKDAKADPLAQYAVDLTARA 177 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G IDPL+GRE EL+RA++VLCRRRKNNPL VG+ GVGKTA+AEGLA RIV+ DVPE+ Sbjct: 178 REGKIDPLVGRENELDRAVEVLCRRRKNNPLFVGDPGVGKTALAEGLALRIVEDDVPEMF 237 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 ++ +++LD+G LLAGT+YRGDFE R KA++++L++ +ILFIDEIHTI+GAG+ SGG Sbjct: 238 SNAKLFALDMGLLLAGTRYRGDFESRLKAVVQRLKELPEAILFIDEIHTIVGAGSTSGGS 297 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+NL+KP+L+SG++R IGSTTY+EF N FEKDRALARRFQ+ID+TEPS EE + I+ G Sbjct: 298 MDASNLLKPVLASGELRCIGSTTYEEFRNHFEKDRALARRFQRIDLTEPSPEECLAILQG 357 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL--------- 411 L+ +Y H VRY+ AV+A V+L +++ DR LPDKAIDV+DE+GA RL Sbjct: 358 LEKRYADFHKVRYSTAAVKAMVDLTARHVRDRLLPDKAIDVMDESGAAVRLGRGVQGARA 417 Query: 412 -------MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD 464 K V+V D+E +VAR+A IP ++VS ++R+ L +L LK LVFGQD Sbjct: 418 SSGKKAVASGKKLPPLVSVGDVERIVARMAGIPVRTVSGTERNRLASLEKDLKELVFGQD 477 Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEY 524 AIE AI ARAGLG E +P G+FLF GPTGVGKTEV L+K +G+E LR+DMSEY Sbjct: 478 AAIELTVRAILRARAGLGQEQRPAGAFLFYGPTGVGKTEVARSLAKLMGVEFLRYDMSEY 537 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 ME+H VSRLIGAPPGYVGFDQGGLLT+AV K P++V+LLDE+EKAHPD+FN+LLQVMD Sbjct: 538 MEKHAVSRLIGAPPGYVGFDQGGLLTEAVRKAPYSVVLLDEVEKAHPDIFNVLLQVMDYA 597 Query: 585 TLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLI---HQDNSTDAMEEIKKIFTPEFR 641 TLTDN GRK DF +VVL+MT+NAG + R ++G QD + ++ ++ F+PEFR Sbjct: 598 TLTDNTGRKTDFSHVVLIMTSNAGAFDMSRPAMGFGGATRQDAAHKGLKAVENTFSPEFR 657 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 NRLD ++ F L+ D++ ++VDKF+ E+ L+Q+ VSLE+ Q+AR WLA KG+D MGA Sbjct: 658 NRLDALVPFGSLTEDMMLRIVDKFMAEIIESLEQRQVSLELGQKARQWLARKGFDPTMGA 717 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 RP+ R+++ L+ LA+ELLFGSL GG + L + L Sbjct: 718 RPLRRLLRTELEDRLAHELLFGSLAKGGTARLDLVDDALVLE 759 >UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomycetales RepID=C7PZ63_CATAD Length = 841 Score = 701 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 300/808 (37%), Positives = 455/808 (56%), Gaps = 74/808 (9%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L ++ A RA + + EHLL A R L A +VD L Q ++ Sbjct: 42 LLTDSARELISTASQRAGQDGSSDLDTEHLLWAATQVEPTRGILAAANVDPDRLAQTIKK 101 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + S + T + +RVL RA +SSG + ++L A+ +Q+S A Sbjct: 102 SL-----PASGSTPSAEPGLTPAAKRVLMRAHELSRSSGSTYIGPQHILAALTEDQDSGA 156 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 ++L +V D+ I+ +R P EQ ++ + ++ + A Sbjct: 157 GHVLNTTQVDAKDLGKRITKASR---------AEGMPTGPEQPSDTPTLDEYGRDMTEDA 207 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G +DP++GR E+E+ ++VL RR KNNP+L+G+ GVGKTAI EGLA RIV GDVP + Sbjct: 208 KAGKLDPVVGRADEIEQTVEVLSRRTKNNPVLIGDPGVGKTAIVEGLAQRIVSGDVPTTL 267 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAASGG 299 + LD+ +L+AG+KYRG+FE+R K ++ ++ + +S ILFIDE+HT++GAG+ G Sbjct: 268 EGKRVVMLDLAALVAGSKYRGEFEERLKNVIDEVGKAADSTILFIDELHTVVGAGSGGEG 327 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA N++KP LS G++ VIG+TT E+ EKD AL RRFQ + I EP++EET++I+ Sbjct: 328 SMDAGNIMKPALSRGELNVIGATTIDEYRKNIEKDAALERRFQPVLIAEPTVEETIEILE 387 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YEAHH V++T +A+ AA ++ +YI+DR LPDKAID+ID+AGAR RL + K + Sbjct: 388 GLRDRYEAHHGVKFTDEALAAAALMSDRYISDRFLPDKAIDLIDQAGARIRLRNLGKSTE 447 Query: 420 ----------------------------------------------------TVNVADIE 427 V DI Sbjct: 448 AIEREDKLAKLTRERDEAVSAENYDRAKDLKARIEELNDEVATIEERREGTLKVTEKDIA 507 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 VV+R IP +++ +R L L D L V GQ++A+ A+ EA++ +RAG+G ++P Sbjct: 508 EVVSRRTGIPVAQLNEDERTRLLKLEDALHDRVVGQEEAVTAIAEAVRRSRAGMGDPNRP 567 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 GSFLF GPTGVGKTE+ L++ L + L+RFDMSE+ E+HTVSRL+G+PPGYVG++ Sbjct: 568 TGSFLFLGPTGVGKTELAKALAELLFGDEDRLIRFDMSEFQEKHTVSRLLGSPPGYVGYE 627 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 + G LT+ V + P++V+L DE+EKAHPD+FN LLQV+D+G LTD GR DFR+ V++MT Sbjct: 628 EAGQLTERVRRKPYSVILFDEVEKAHPDIFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMT 687 Query: 605 TNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 +N G + + + M++++ F PEF NRLD ++ F L + +VD Sbjct: 688 SNIGSQLIL--AHMGDTDEIRDQLMDQVRSFFPPEFINRLDEVVIFHSLGKPEMGNIVDL 745 Query: 665 FIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 + + +L + + LEV+++A+NWL E+GY GARP+ R IQ L +A LL G Sbjct: 746 MLDSSRRRLKAQELGLEVTEKAKNWLVERGYKPEFGARPLRRTIQSELDNKVATLLLSGD 805 Query: 725 LVDGGQVTVALDKEKNELTYGFQSAQKH 752 G + D+ + L + + Sbjct: 806 THPGDTIV--ADEADDHLVCTVKHEDEP 831 >UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6Q1Y5_NITSB Length = 729 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 374/745 (50%), Positives = 521/745 (69%), Gaps = 16/745 (2%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 M++ +L A A+ HRHE++TVEH+ LALL++P + L+ D+ ++++L Sbjct: 1 MISNQLNSIFKEAVKYAKRHRHEYLTVEHVFLALLNSPEGAKILKEAGADIEIMKRKLIQ 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +E LP R+ T++ RV++ + H+Q++ + E T ++LVA+F E+ S + Sbjct: 61 HLESVLKPLPE-NVVREPFETVALSRVIENMIRHIQNAEKKEATVGDLLVALFDEEHSYS 119 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 YLL++ +S+LD++ +SH + ++ E + FT +L + A Sbjct: 120 VYLLKEQGISKLDIMEIVSH----------QAEVVESKPSKKTDEESYLAKFTIDLLKEA 169 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G IDP+IGR+KE+ER +Q+LCRR+KNNPLLVGE GVGKTAIAEGLA +I G++P+V+ Sbjct: 170 KEGKIDPVIGRDKEIERVMQILCRRKKNNPLLVGEPGVGKTAIAEGLALKIAAGEIPDVL 229 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 ++YSLD+G+LLAGTKYRGDFEKR K ++++L+ N+ILFIDEIHTI+GAGA GG Sbjct: 230 EGASLYSLDMGALLAGTKYRGDFEKRLKGVVEELKSIPNAILFIDEIHTIVGAGATQGGS 289 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+N++KP L+SG I+ IG+TTY EF N EKDRAL+RRF K+D+ EP +E T +I+ G Sbjct: 290 MDASNMLKPALASGAIKCIGATTYAEFRNFLEKDRALSRRFAKVDVKEPDLETTFKILKG 349 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 LK KYE HH VRY A+R+AVEL+ KYINDR LPDKAID+IDE GA L KR+ Sbjct: 350 LKDKYEKHHKVRYHINALRSAVELSDKYINDRQLPDKAIDLIDEVGASFHLR--KKRRSV 407 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V V DIE +A++ +P + V+ D + LKNL ++LK V GQ++A+E L AIK +RAG Sbjct: 408 VTVNDIEDTIAKMVGLPPQRVTSDDLEILKNLEEKLKERVLGQEEAVEQLAMAIKRSRAG 467 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 L +KP+GSFLF GPTGVGKTE+ +L++ +G+ RFDMSEYME+H VSRLIGAPPGY Sbjct: 468 LNPPNKPIGSFLFVGPTGVGKTELAKELARTMGVHFERFDMSEYMEKHAVSRLIGAPPGY 527 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 +G+++GGLLT+ + KHP+ VLLLDEIEKAHPD+ NILLQVMDN TLTDNNG ADF++VV Sbjct: 528 IGYEEGGLLTETIRKHPYTVLLLDEIEKAHPDLINILLQVMDNATLTDNNGNVADFKHVV 587 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L+MT+N G E ++ Q++ + E +K+ FTPEFRNRLD I+ F LS +++ Sbjct: 588 LIMTSNVGATE---ANVMGFKQESVSKFDEALKQYFTPEFRNRLDAIVRFRPLSQEIVEG 644 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +VDKFI EL QLD K ++L ++ +A+ +LA+KGY +GARP+ARVI + +K PL NE+ Sbjct: 645 IVDKFIAELNDQLDNKSITLSLTPKAKKYLAQKGYSPELGARPLARVISEEIKTPLTNEI 704 Query: 721 LFGSLVDGGQVTVALDKEKNELTYG 745 LFG L GG+V + K K T Sbjct: 705 LFGKLRHGGKVKIDEKKGKLAFTIQ 729 >UniRef50_D1Y107 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y107_9BACT Length = 774 Score = 699 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 292/758 (38%), Positives = 450/758 (59%), Gaps = 21/758 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + + +A A H F+ EHL++ L++ S A AL+ + + +E+ Sbjct: 5 FTERSKRVIQIAHREALRLGHAFIGTEHLMIGLIAEESSVAALALKEAGLAAEDVAREIL 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 A P + D + + VL A+ + + V ++L+ + S E Sbjct: 65 A----LRPPAAPYAQPVDLPLSDRARGVLNAAIHLARELHSSYVGTEHLLLGVLSAPECT 120 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG--EERMENFTTNLN 177 A + L + + ++ + Q ++ + A ++ + +L Sbjct: 121 ACHALAELGLDTENLRVSLKKQLLAQSSRQEAENDKENGDARPAADVKTPTLDKYCVDLT 180 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 A G +DPLIGRE+E+ R +Q+LCRRRKNNP+LVG+ GVGKTAI EGLA++I +G P Sbjct: 181 AKAAKGELDPLIGREQEMHRMMQILCRRRKNNPVLVGDPGVGKTAIVEGLAYKIQKGSAP 240 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 ++ + L +G+L+AGTKYRG+FE R K ++ +L N ILFIDE+HT++GAG+A Sbjct: 241 SLLKGKRVVELTMGTLVAGTKYRGEFEDRMKKIVDELTAAKNVILFIDELHTVVGAGSAE 300 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DAAN++KP L+ G+ +VIG+TT E++ EKD AL RRFQ + + EP + + I Sbjct: 301 -GSLDAANILKPSLARGEFQVIGATTRDEYTKNIEKDAALERRFQPVAVGEPDQDAALAI 359 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + GLK YE HH VRYT A+ AAV L+ +Y++DR LPDKAID+IDEAGA+ RL ++ Sbjct: 360 LQGLKESYEKHHSVRYTEGALEAAVRLSSRYLSDRSLPDKAIDLIDEAGAKVRLDLDGRQ 419 Query: 418 KKT---VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 V+ ++ V++ + IP K++++ + L L + + GQD+A+ AL A+ Sbjct: 420 IPEGLTVDEEEVAGVLSEWSGIPVKTLTEHEAQRLLRLESEIHQRLVGQDEAVSALCRAV 479 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVS 531 + +R+GL +PVGSFLF GP+GVGKTE+ L++AL LL FDMSEYMERH + Sbjct: 480 RRSRSGLKDPRRPVGSFLFLGPSGVGKTELARCLARALFGSEKALLAFDMSEYMERHEAA 539 Query: 532 RLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 +LIGAPPGYVG+D+ G LT+AV +HP +V+L DEIEKA+PDVFN+LLQ+++ G LTD +G Sbjct: 540 KLIGAPPGYVGYDEEGRLTEAVRRHPWSVVLFDEIEKANPDVFNLLLQILEEGRLTDAHG 599 Query: 592 RKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD------AMEEIKKIFTPEFRNRLD 645 R DF+N V++MT+N GVRET + +G + + +K+ F PEF NR+D Sbjct: 600 RTVDFKNTVVIMTSNLGVRETAKAGLGFSASAEAEKKKQSEAVLGAVKEFFRPEFLNRVD 659 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 + F LS + + +V D + +L+ +L + G+ L ++++AR +L + GARP+ Sbjct: 660 AQLVFHPLSAEEMTRVFDIMMFDLRARLGEHGIILSMAKDAREFLLRAAAAQNQGARPLR 719 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 R+IQ ++ PL++ +L G + DG V LD E + Sbjct: 720 RLIQTKIEDPLSDLILSGEVPDGSTVDCVLDGEALAFS 757 >UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n=6 Tax=Bacteria RepID=C8NYT7_9CORY Length = 967 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 296/862 (34%), Positives = 454/862 (52%), Gaps = 114/862 (13%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + +A AR+ H ++ EH+LL L+ A +ALE+ ++L +R+E+E Sbjct: 5 FTDRARRVIVLAQQEARDLNHNYIGTEHILLGLIQEGEGVAAKALESMGINLDDVRREVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + T ++VL+ ++ G + +L+ + E E Sbjct: 65 EIIGRG-----SQPHTGHVPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGV 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPG------------------------- 154 AA +L K V + E + +P Sbjct: 120 AAQVLIKLGADLPRVRQQVIQLLSGYEGGEGQNPEIAEGQQGGPGLTGAGAGSGSMGGMG 179 Query: 155 -SQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 + ++ + ++ F NL A+ G +DP++GR+KE+ER +QVL RR KNNP+L+ Sbjct: 180 SGRGGNQGERSNSLVLDQFGRNLTAAAKEGKLDPVVGRDKEIERIMQVLSRRTKNNPVLI 239 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 GE GVGKTA+ EGLA I G VPE + D +YSLD+GSL+AG++YRGDFE+R K +LK+ Sbjct: 240 GEPGVGKTAVVEGLALDIANGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKE 299 Query: 274 LEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEK 333 + Q + ILFIDEIHT++GAGAA G +DAA+L+KP L+ G+++ IG+TT E+ EK Sbjct: 300 INQRGDIILFIDEIHTLVGAGAAEGA-IDAASLLKPKLARGELQTIGATTLDEYRKHIEK 358 Query: 334 DRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH 393 D AL RRFQ + + EPS+E T+QI+ GL+ +YEAHH V YT A+ AA L+ +YINDR Sbjct: 359 DAALERRFQPVQVDEPSVENTIQILKGLRDRYEAHHRVSYTDDALAAAANLSDRYINDRF 418 Query: 394 LPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIAR------------------ 435 LPDKA+D++DEAGAR R+ ++ K +V D + V R Sbjct: 419 LPDKAVDLLDEAGARMRIKRMTAPKGLRDVDDRITEVRREKEAAIDAQDFEKAAGLRDTE 478 Query: 436 --------IPEKSVSQSDRDTLKNLGDRLKMLV--------------------------- 460 EK + + + +G+ V Sbjct: 479 RKLGEERAEKEKQWRAGELEDIAEVGEEQIADVLANWTGIPVFKLTESESSRLLHMEDEL 538 Query: 461 ----FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE- 515 GQD A++A++ AI+ RAGL +P GSF+FAGP+GVGKTE++ L++ L + Sbjct: 539 HQRIIGQDDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDE 598 Query: 516 --LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV 573 L++ DM E+ +R T SRL GAPPGYVG+++GG LT+ V + P +V+L DEIEKAH ++ Sbjct: 599 DSLIQVDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEI 658 Query: 574 FNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK-----------SIGLIHQ 622 +N LLQV++ G +TD GR DF+N VL+ T+N G + + ++ Sbjct: 659 YNTLLQVLEEGHVTDGQGRNVDFKNTVLIFTSNLGTSDISKAVGLGFSGASTTDSDAQYE 718 Query: 623 DNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV 682 +E+KK F PEF NR+D I+ F L+ + I ++V+ L L+ + + +E+ Sbjct: 719 RMKQKVHDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVELLAGRLAKNLETQDMGIEL 778 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDK----- 737 S++A+N LA +G+D +GARP+ R IQ ++ L+ ++LFG + G + V + Sbjct: 779 SEDAKNLLAARGFDPVLGARPLRRTIQREIEDVLSEKILFGEIGAGEIIEVGVTNWDGKT 838 Query: 738 ----EKNELTYGFQSAQKHKAE 755 + + F K E Sbjct: 839 DSPRDYENAEFTFTPKPKPLPE 860 >UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY Length = 830 Score = 688 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 300/830 (36%), Positives = 452/830 (54%), Gaps = 81/830 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + +A AR H ++ EH+LL L+ A +ALE+ + L A+RQ++E Sbjct: 5 FTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I Q T ++VL+ ++ G N + ++L+ + E E Sbjct: 65 EIIGQG-----QQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGV 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L K V + + + G+ +E ++ F NL Q Sbjct: 120 AAQVLVKLGADLNRVRQQVIQLLHGYQGKEPQAAGTA--AESAPSTSLVLDQFGRNLTQA 177 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGR+KE+ER +QVL RR KNNP+LVG+ GVGKTA+ EGLA +IV+G++PE Sbjct: 178 AREGKLDPVIGRDKEIERVMQVLSRRTKNNPVLVGDPGVGKTAVVEGLAQKIVKGEIPET 237 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D +Y+LD+G+L+AG++YRGDFE+R + +LK++ + ILFIDE+HT++GAGAA G Sbjct: 238 LKDKQLYTLDLGALVAGSRYRGDFEERLRKVLKEIRSRGDIILFIDELHTLVGAGAAEGA 297 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAA+++KP+L+ G+++ IG+TT E+ EKD AL RRFQ I + EP+I T++I+ Sbjct: 298 -IDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVEEPTISHTIEILK 356 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YEAHH V T A+ AA +LA +YI+DR+LPDKAID+IDEAG+R R+ ++ Sbjct: 357 GLRDRYEAHHRVSITDGALVAAAQLADRYISDRYLPDKAIDLIDEAGSRMRIRRMTAPPD 416 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML--------VFGQDKAIEALT 471 + + V R + L++ RL+ G + + Sbjct: 417 LREFDEKIAKVRRDKEAAIDAQDFERAAALRDEEKRLQAQRAQKEKEWKAGDMDTVAEVN 476 Query: 472 EAI-------------------------------------------------KMARAGLG 482 E + + RAGL Sbjct: 477 EELIAEVLATATGIPVFRLTEEESSRLLRMEEELHKRVIGQDDAIKALSQAIRRTRAGLK 536 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPG 539 +P GSF+FAGP+GVGKTE+ L++ L + L++ DMSE+ME+HTVSRL G+PPG Sbjct: 537 DPKRPGGSFIFAGPSGVGKTELCKALAEFLFGDEDALIQLDMSEFMEKHTVSRLFGSPPG 596 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+++GG LT+ V + P +V+L DEIEKAH D+FN LLQV++ G LTD GR DF+N Sbjct: 597 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHGDIFNSLLQVLEEGRLTDAQGRNVDFKNT 656 Query: 600 VLVMTTNAGVRETER-KSIGLIHQDN--------STDAMEEIKKIFTPEFRNRLDNIIWF 650 ++VMTTN G R+ + + +G D+ EE+K+ F PEF NR+D+ I F Sbjct: 657 IIVMTTNLGTRDISKGQPMGFARPDDTQTTYDRMKAKVNEELKQHFRPEFLNRVDDTIVF 716 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L+ I +VD + L +L + + +EV A+ LAE+GYD +GARP+ R IQ Sbjct: 717 HQLTQKEITAIVDLMVARLDERLKDRDMGIEVRPHAKKILAERGYDPVLGARPLRRTIQR 776 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEK--NELTYGFQSAQKHKAEAAH 758 ++ L+ ++L+G L G V V + E + T+ + E A Sbjct: 777 EIEDALSEKILYGELKSGQIVIVDAEGEGADAKFTFRGVPKPQALPETAE 826 >UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPJ8_9FIRM Length = 794 Score = 688 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 298/800 (37%), Positives = 434/800 (54%), Gaps = 69/800 (8%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 + +LN A A H ++ EH+L L + A L V ++ + Sbjct: 6 FTDKANDALNCALTCAMSMGHTYVGSEHILYGLCGSNGGVAYTVLRQSGVTCNSIASRIN 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 A I + P + + T +R+L+ AV +++G+ ++L AI + E Sbjct: 66 ALIGKGLP-----TQLTVSDFTPRSRRILESAVMIARNAGKTAAGTDHILRAIMRDNECY 120 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A+ L + +S V++ + + + + + NL L Sbjct: 121 ASVFLHEMGISGEAVLD----------QGADTQKNTPQGKRNGSVLPSALSGYGRNLTML 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G IDP GRE+E R I++L RR KNNP LVGE+GVGKTAIAEGLA +I G+VP+ Sbjct: 171 AQEGKIDPCFGRERETNRVIEILLRRSKNNPCLVGEAGVGKTAIAEGLAMKIAGGNVPDE 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + IY LDI S+LAG KYRGDFE+R K + ++ D N I+FIDEIH I+GAGAA G Sbjct: 231 LKTKKIYMLDITSMLAGAKYRGDFEERLKRVFDEIRNDGNIIVFIDEIHNIVGAGAAEGA 290 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP+L+ G+IR+IG+TT E+ EKD AL RR Q + + EP+ EETV I+N Sbjct: 291 -IDAANILKPMLARGEIRLIGATTNAEYKKYIEKDPALERRLQPVTVNEPTEEETVTILN 349 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YE++H V+ T +A+ AAV L+V+YINDR LPDKAID+IDE A+ RL + Sbjct: 350 GLRCRYESYHKVKITDEAISAAVGLSVRYINDRFLPDKAIDLIDEGSAKIRLSRSGEDSV 409 Query: 420 ------------------------------------------TVNVADIESVVARIARIP 437 T+ DI VV + IP Sbjct: 410 GKKLKKLSDEKIRAINNKDFALALKLREQEKTLCANNGGYTATLTADDIADVVTQYTGIP 469 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 + L L L V GQ+KA+ A+ A++ R+GL EH+PVGSF+F G T Sbjct: 470 VRYNGNDTTKWLACLEKTLSENVIGQEKAVRAVANAVRRGRSGLSDEHRPVGSFIFLGTT 529 Query: 498 GVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 GVGKT+ +L+KAL L+RFDMSEY E+H+VS+LIGAP GYVG++ GG LTD V Sbjct: 530 GVGKTKCCKELAKALFGTEKALIRFDMSEYSEKHSVSKLIGAPAGYVGYEDGGRLTDRVR 589 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETE- 613 K P++V+L DEIEKAHPDVF+ILLQV+D+G LTD+ GR DF N V++MT N G Sbjct: 590 KSPYSVVLFDEIEKAHPDVFDILLQVLDDGRLTDSGGRTVDFTNTVIIMTGNIGSALIAK 649 Query: 614 -RKSIGLIHQDNSTD----AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVE 668 + +G Q + E++K F PEF R+D ++ F+ LS + +K + E Sbjct: 650 GKSRLGFGIQQRQEEISGLVKGELEKYFRPEFLGRVDEVVVFNELSCAEYKLICEKMLSE 709 Query: 669 LQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 L Q +++G++ S+ L + R GARP+A++I N++ +++ ++ G G Sbjct: 710 LSKQCERQGIAFSWSERLSEKLCAEAKSRNEGARPIAKLIDKNVRNMISDGIISGEFSTG 769 Query: 729 GQVTVALDKEKNELTYGFQS 748 + + + + +S Sbjct: 770 DGIYADIADDDSYSVRKIKS 789 >UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ClpA n=26 Tax=Proteobacteria RepID=Q2GGQ4_EHRCR Length = 765 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 364/761 (47%), Positives = 527/761 (69%), Gaps = 14/761 (1%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L++ LE SL+ A + A + HE+ T+EHLLLAL + AR A V + L+ + Sbjct: 7 VLSKNLEASLHKALSIAFDFHHEYATLEHLLLALTDDIDARRVFYAFRVSIDKLKITIIN 66 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F+ P L + + +PT F+R++ RA+ H +SG++EVTGAN+L I SE++S + Sbjct: 67 FLRYEIPTL-IDKGISEVKPTAIFERLIHRAIIHAHTSGKSEVTGANILAEILSEKDSYS 125 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQA---------GGEERMEN 171 A L + + +DVVN+ S+ + N ++ E +++ Sbjct: 126 ACFLHEQNIKYIDVVNYTSNNNLYAGEFNVDQEFVKYNEYGKSIGNVNKDILKDNETLDS 185 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 + NLN+ A+ G ID +IGR ELER ++VL RRRKNNPL VG+ GVGKTAI EGLA +I Sbjct: 186 YCVNLNEAAKKGKIDYVIGRAYELERTMEVLLRRRKNNPLYVGDPGVGKTAIVEGLALKI 245 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 ++GDVP+ + IYSLD+G+LLAGT+YRGDFE+R K+++K +E N+ILFIDEIHTI+ Sbjct: 246 IEGDVPDQLKKMVIYSLDMGALLAGTRYRGDFEERIKSVIKAIEAKENAILFIDEIHTIV 305 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 GAG+ SGG +DA+NL+KP L+ G +R IG+TTY+E++N FEKDRALARR+QKI++ E S+ Sbjct: 306 GAGSTSGGSLDASNLLKPALARGTLRCIGATTYKEYNNNFEKDRALARRYQKINVEESSV 365 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 ET++I++G+K YE+HH VRYT +A++ A EL+ +YI+ + LPDKA+DVIDEAG +L Sbjct: 366 GETLRILDGIKSYYESHHQVRYTNQAIKYAAELSDRYISGKMLPDKAVDVIDEAGVYCKL 425 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 K + +DIE +++RI IP ++ +D D +KNL + LK +FGQD AI L Sbjct: 426 HNTG--NKVITGSDIEHIISRITEIPCSNLLFNDLDRVKNLEENLKKDIFGQDFAISHLV 483 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVS 531 ++IK+A+AGL + +KP+ S+LF+GPTGVGKTE+ QL+ +G++L+RFDMSEYME H +S Sbjct: 484 DSIKIAKAGLRNYNKPLASYLFSGPTGVGKTELARQLANHMGMKLIRFDMSEYMESHAIS 543 Query: 532 RLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 ++IG+PPGYVG+DQGGLLTD++ +H ++VLLLDEIEKAH D++NILLQ+MD G +TD G Sbjct: 544 KIIGSPPGYVGYDQGGLLTDSISRHQYSVLLLDEIEKAHSDIYNILLQIMDYGCVTDTYG 603 Query: 592 RKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST--DAMEEIKKIFTPEFRNRLDNIIW 649 +K +F NVV+++TTNAG E + SIG I + T D + I++IF+PEFRNRLD II Sbjct: 604 KKVNFHNVVIILTTNAGAFELSKSSIGFIRNKSFTHGDNEKAIERIFSPEFRNRLDAIIS 663 Query: 650 FDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 F L +V+ ++V KFI +L+ QL +K V ++V+ + +LA+ GY+ A G R + +I Sbjct: 664 FSSLDQEVMLRIVKKFIYQLKEQLAKKNVHIDVADDVLMYLAQSGYNDAYGVRNIENIIS 723 Query: 710 DNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 +KK LA E+LFG L +GG V + LD + N+L Y F A+ Sbjct: 724 KKVKKYLAEEILFGKLFNGGNVKIKLDADTNKLVYDFCCAE 764 >UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular organisms RepID=A9BF41_PETMO Length = 830 Score = 686 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 313/825 (37%), Positives = 479/825 (58%), Gaps = 74/825 (8%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 + A A++ H ++ EH+LL LL E ++ +++ E+ Sbjct: 5 FTERAAKVFIEAQNEAKQMGHPYVGTEHILLGLLKVGGGHLDTVFEEFNLYYNSIKMEIT 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + QPT +R+L+ A + G N++ ++L+ I E E Sbjct: 65 NVVGTN----STQGIIGSPQPTPRAKRILELAYDESELMGFNKIDAEHLLLGICREAEGI 120 Query: 120 AAYLLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 A+++L++ ++ R ++ + + G + + ++ +++E + T+ Sbjct: 121 ASHILKRSGINLTLMRKELTDMMIKGRSTGRMEIAKTEELEERKRQKQNALKQLEEYGTD 180 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L A +DP+IGRE E+ R +++L RR+KNNP+L+GE+GVGK+A+ EGLA RIV+G Sbjct: 181 LTAQAENRKLDPIIGREIEINRIMEILARRKKNNPVLIGEAGVGKSAVVEGLAQRIVEGR 240 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VPE++ + TI+SLDI S++AGTKYRG+FEKR K L++ L++ + ILFIDE+H I+ AGA Sbjct: 241 VPEILKNKTIFSLDITSIVAGTKYRGEFEKRMKKLMQILQKTEDIILFIDELHMIVEAGA 300 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 A G +DAAN++KP L++G+I VIGSTT E+ EKD AL RRFQKI +TEP+IEET+ Sbjct: 301 AEGSSMDAANVLKPALANGEITVIGSTTANEYRKFIEKDPALERRFQKIYVTEPTIEETI 360 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 I++G+K KYE HH V+Y A+++AV+L+V+YI DRHLPDKAIDVIDEAGA+ARL ++ Sbjct: 361 NILSGIKFKYEEHHKVKYNHGAIQSAVQLSVRYITDRHLPDKAIDVIDEAGAKARLSALT 420 Query: 416 KRKK---------------------------------------------------TVNVA 424 K + Sbjct: 421 LPDKLKIQYEKIADIESKRNDPNSKENVEEKLKKMKEKYEEEYSKWRSEAENKIIQITEE 480 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI +++ +P + + + + L NL L V GQD+AI+++ +AI+ AR+GL Sbjct: 481 DIAEIISNWTGVPLRQLRAEEMEKLLNLEAVLHERVVGQDEAIKSVAKAIRRARSGLKDP 540 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYV 541 +P G F+F GPTGVGKTE+ L+ L L+R DMSEYME+ +VSRL+GAPPGYV Sbjct: 541 RRPTGVFMFLGPTGVGKTELAKTLATYLFGNETHLVRIDMSEYMEKFSVSRLVGAPPGYV 600 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+D+GG LT+ V + P++V+LLDEIEKAH DV+NILLQ+MD G LTD+ GR DFRN ++ Sbjct: 601 GYDEGGQLTEIVRRRPYSVILLDEIEKAHTDVYNILLQIMDEGRLTDSQGRTVDFRNTII 660 Query: 602 VMTTNAGVRETE--RKSIGL--------IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 +MT+N G + ++S+G ++D M +K F PEF NRLD++I F Sbjct: 661 IMTSNLGSEQISKTKRSLGFVEEGTIESEYKDIKEQVMSAVKAAFKPEFINRLDDVIVFH 720 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L+ + + ++ + +L+ +L+++ ++L V + A ++L EKGYD GARP+ R IQ Sbjct: 721 PLTKNQLKNIISIQLSDLKSRLEERNLTLSVKESAIDFLLEKGYDSVFGARPLKRAIQRY 780 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 ++ PL+ ELL G +G ++ V K K L++ K + E Sbjct: 781 IEDPLSEELLKGKYEEGDKILVTHQKSKESLSFRRVPKDKKQMEK 825 >UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI000198575F Length = 923 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 287/839 (34%), Positives = 446/839 (53%), Gaps = 82/839 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + ++ + A+ + +HLLL L++ + + + + R + + Sbjct: 81 FTERAIKAVIFSQREAKALGRNMVFTQHLLLGLVAEDRSLDGFLGSGITIDDARDAVRSI 140 Query: 62 ---------IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAI 112 I + D ++S +RV + A+ + ++ G N + ++ + + Sbjct: 141 WHDYNDSSIISGIPSSQTSVASSTDVPFSISTKRVFEAAIEYSRTMGYNFIAPEHIAIGL 200 Query: 113 FSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAG-------- 164 F+ + A +L++ + + + + S+P + + Sbjct: 201 FTVDDGSAGRVLKRLGANVNHLAAVAVSRLQGELAKDGSEPSATFKGMQGKSFSGKAAIV 260 Query: 165 -------GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESG 217 + + F +L A G IDP+IGR+ E++R +Q+LCRR KNNP+L+GESG Sbjct: 261 KSSGKKKEKSALAQFCVDLTARATDGLIDPVIGRDMEVQRVVQILCRRTKNNPILLGESG 320 Query: 218 VGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD 277 VGKTAIAEGLA I + DVP + I SLDIG L+AGTK RG+ E R L+ + + Sbjct: 321 VGKTAIAEGLAISIAEADVPSFLLTKRIMSLDIGLLMAGTKERGELEARVTTLISDILKS 380 Query: 278 TNSILFIDEIHTIIGAG----AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEK 333 N ILFIDE+H ++G+G G +D A+L+KP L G+++ STT E+ +FEK Sbjct: 381 GNIILFIDEVHMLVGSGIAGRGNKGSGLDIASLLKPSLGRGQLQCFASTTIDEYVKLFEK 440 Query: 334 DRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH 393 D+ALARRFQ + I EPS EE V+I+ GL+ KYEAHH R+T +A+ AAV L+ +YI DR Sbjct: 441 DKALARRFQPVLINEPSQEEAVRILLGLREKYEAHHKCRFTLEAINAAVHLSARYIPDRR 500 Query: 394 LPDKAIDVIDEAGARARLMPVSKRKKT--------------------------------- 420 LPDKAID+IDEAG++AR+ ++K+ Sbjct: 501 LPDKAIDLIDEAGSKARMEAYKRKKEKQTSVLLKSPDDYWQEIRAVKAMHEMMIMSMTLS 560 Query: 421 -------VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 V +I V + + IP + ++ +R L L ++L+ V GQD AI +++ A Sbjct: 561 PWIIPIVVGPNEIAVVASLWSGIPVQQITADERMLLVGLHEQLRKRVVGQDNAIASISRA 620 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTV 530 +K +R GL ++P+ + LF GPTGVGKTE+ L+ ++R DMSEYME+H+V Sbjct: 621 VKRSRVGLKDPNRPIAAMLFCGPTGVGKTELAKALAACYFGSEAAMVRLDMSEYMEQHSV 680 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 S+LIG+PPGYVG+ +GG LT+A+ + P V+LLDEIEKAHPD+FNILLQ+ ++G LTD+ Sbjct: 681 SKLIGSPPGYVGYGEGGTLTEAIRRQPFTVVLLDEIEKAHPDIFNILLQMFEDGHLTDSQ 740 Query: 591 GRKADFRNVVLVMTTNAGVRETER---KSIGLIHQDNSTD--------AMEEIKKIFTPE 639 GR+ FRN ++VMT+N G + SIG D+ MEE+K F PE Sbjct: 741 GRRVLFRNALVVMTSNVGSAAIAKGRQSSIGFSIADDEPTSYAGMKALVMEELKAYFRPE 800 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAM 699 NRLD I+ F L + ++++ + E++ +L G+ +EVS + L ++GYD+ Sbjct: 801 LLNRLDEIVVFHPLEKAQMLEILNTMLQEVKERLSSLGIGMEVSVSVIDLLCQQGYDKNY 860 Query: 700 GARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 GARP+ R + ++ PL+ LL G V LD N + + H ++ A+ Sbjct: 861 GARPLRRAVTLIIEDPLSEALLTEEYQPGDIAVVDLDASGNPFVRKQSNRRIHLSDTAY 919 >UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FG52_SACEN Length = 768 Score = 676 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 286/760 (37%), Positives = 432/760 (56%), Gaps = 38/760 (5%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L+++ ++ A E + HLL A+ L V + L + Sbjct: 16 LLDEQAHEVVSKAIRATVEWGSRELDSAHLLWAVTQVGPTARMLGDSGVRVEELASAVRT 75 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + + + S +R L A S G + V +VL+ + ++ +S A Sbjct: 76 VAGTYDAL--GGQAQGKPVLSSSARRALLGAHQQALSEGADAVGARHVLLGLATDADSVA 133 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 L + + S+ +++ F ++ +LA Sbjct: 134 GRALAR--------------------AMERSERTRPNARPSVLSTTPKLDEFGMDMTELA 173 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G +DP++GR +E+E+A++VL RR KNNP+ +G+ GVGKTAI EGLA RIV G VP + Sbjct: 174 RAGRLDPVVGRSQEVEQAVEVLGRRTKNNPVFIGDPGVGKTAIVEGLAQRIVDGAVPWSL 233 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL-FIDEIHTIIGAGAASGG 299 A + SLD+ ++AG KYRG+FE+RF+ L+ ++ Q + +L FIDEIH I+GAGA G Sbjct: 234 AGRRVVSLDLAGMVAGAKYRGEFEQRFRDLMNEIRQHRDEVLVFIDEIHGIVGAGAGE-G 292 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA ++KP L+ G+++V+G+TT +E+ EKD AL RRFQ I + EPS+ +TV ++ Sbjct: 293 TMDAGTMLKPALARGEVQVVGATTVEEYRKHIEKDPALERRFQPILVAEPSVGDTVAVLR 352 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP------ 413 GL+ +Y+ HH V A+ AA L+ +YI DR LPDKA+D++D+A +R RL+ Sbjct: 353 GLRDRYQLHHRVVIADDALVAAARLSQRYIADRFLPDKAVDLLDQACSRVRLLRGGSPND 412 Query: 414 ---VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 ++ + +V D+ VV+R IP ++ +D+ L L L+ V GQD A+ ++ Sbjct: 413 PGSSAEHQPSVGRDDVADVVSRRTGIPVSDLTAADKQRLLGLEKVLRSKVIGQDAAVRSV 472 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMER 527 EA++ ARAGL +P+GSFLF GPTGVGKTE+ L++AL + L+RFDM E+ E+ Sbjct: 473 AEAVRRARAGLADPERPIGSFLFLGPTGVGKTELARALARALFGDAQRLIRFDMGEFQEK 532 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 HTVSRLIGAPPGYVG+ + G LTD V + P++VLLLDE+EKAHPDVFN LLQ++D G L+ Sbjct: 533 HTVSRLIGAPPGYVGYGESGQLTDRVRRQPYSVLLLDEVEKAHPDVFNTLLQLLDEGRLS 592 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 D GR DFRNVV++MT+N G G D++ + +EE++ F PEF NR+D++ Sbjct: 593 DAQGRSVDFRNVVVIMTSNIGADRILDA--GGSAGDSALELLEELRSFFRPEFINRIDDV 650 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 F L + ++ + QL +G+ +EV++ A WLAE+G+ GARP+ RV Sbjct: 651 TVFQPLGPAALREITGLLLERTYQQLLARGIGMEVTEAAVAWLAERGHQPEFGARPLRRV 710 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 IQ L LA ++ G L G +V V E L + Sbjct: 711 IQRELDNRLAAMVIDGELSSGHRVLVDAVGEDLVLEVSVE 750 >UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit ClpA n=4 Tax=Clostridium RepID=A3DES0_CLOTH Length = 776 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 364/772 (47%), Positives = 500/772 (64%), Gaps = 34/772 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 L+ L A+ A+ +HEF T EH+L A L R+ +E C + ++++L F Sbjct: 4 LDDVANKILIAAYNEAKHQKHEFFTPEHILYASLFFDEGRDIIENCGGKVEDIKKDLLEF 63 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 P++ E + +L V+Q + ++GR + +++VA++ E+ES A+ Sbjct: 64 FRNNMPIV----ENHEPIESLGINSVMQATAYQCIAAGREYIRIGDIIVALYGEKESFAS 119 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE--------------------- 160 Y+L+K+ + +LDV+ +ISHG + S Sbjct: 120 YILQKNGIKKLDVLKYISHGVSLVPKNMETSLKSLETDTYLEAYQYADDWEYDYEYEDID 179 Query: 161 -------EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 E + +E+FT +L + AR G IDPLIGRE LER IQVL RR KNNP+ V Sbjct: 180 EDEDIDEESSSKSNFLEHFTIDLTEKARKGKIDPLIGREDILERTIQVLSRRLKNNPIHV 239 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 G+ GVGKTAI EGLA IV+ VP+ + IY LD+GS+LAGTKYRGDFE+R K +L + Sbjct: 240 GDPGVGKTAITEGLARLIVEDKVPKSLKGSKIYYLDMGSMLAGTKYRGDFEERIKKVLNE 299 Query: 274 LEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEK 333 ++ +I++IDEIHTI+GAGA S G +DA+N+IKP L+ G +R IGSTTY+E+ FEK Sbjct: 300 IQNQPKAIVYIDEIHTIVGAGAVSDGAMDASNIIKPFLTQGTLRFIGSTTYEEYKKYFEK 359 Query: 334 DRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH 393 DRAL+RRFQKID+ EPSI++T +I+ GLK +YE +H V+YT A+R A EL+ KYI DRH Sbjct: 360 DRALSRRFQKIDVPEPSIDDTFKILKGLKDRYEEYHKVKYTDSALRLAAELSAKYIQDRH 419 Query: 394 LPDKAIDVIDEAGARARLMPVSKRK-KTVNVADIESVVARIARIPEKSVSQSDRDTLKNL 452 LPDKAIDVIDE GA RL + K T+ DIE V+ IARIP +SVS+ + LKNL Sbjct: 420 LPDKAIDVIDETGAYVRLHAKDEDKVITIKNKDIERTVSAIARIPIQSVSRDEISKLKNL 479 Query: 453 GDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 +LK +FGQDKAI+ + +AIK +RAG KPV S LF GPTGVGKTE+ QLS L Sbjct: 480 DVKLKSTIFGQDKAIDTVVQAIKRSRAGFNENEKPVASLLFVGPTGVGKTELAKQLSLHL 539 Query: 513 GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 GI +RFDMSEY E+HTVSRLIGAPPGYVG+++GGLLTDA+ K PH VLLLDEIEKAHPD Sbjct: 540 GIPFIRFDMSEYQEKHTVSRLIGAPPGYVGYEEGGLLTDAIRKTPHCVLLLDEIEKAHPD 599 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-EE 631 ++N+LLQVMD LTDNNG+KADFRNV+L+MT+NAG RE R IG ++ AM +E Sbjct: 600 IYNVLLQVMDYAVLTDNNGKKADFRNVILIMTSNAGAREVGRTLIGFDSRNVDRSAMTKE 659 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLA 691 +++IF+PEFRNRLD+I+ F+H++ ++ + K I + + +L K + L+V++ W+A Sbjct: 660 VERIFSPEFRNRLDDIVVFNHINEEMALLITKKAINQFKEKLKTKNIKLKVTERCCKWIA 719 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 +KG GAR + R +QD +K +E+LFG L GG + + + +++ Sbjct: 720 QKGLSSIYGAREILRYVQDKIKTYFVDEVLFGELSKGGTAIIDVVDGEIKIS 771 >UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Helicobacter RepID=C5ZY74_9HELI Length = 746 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 345/761 (45%), Positives = 508/761 (66%), Gaps = 22/761 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +++EL L A +RA+ HE++T+EH+ +LL + + +A++ C ++ AL+ ++E + Sbjct: 4 ISKELNYILQAAQSRAKHLGHEYLTLEHIFHSLLDSQTVIKAIQECGGNIKALKSQIERY 63 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + P + E TL+ RV++ V HV+ + R E ++L AI E ++ Sbjct: 64 LTHFLQSHPDASEL--PIETLAVTRVIEIMVSHVKGAQRKEAQVGDLLAAILEEDKAFCT 121 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 LL+ ++RL+++ +I+ +Q +++ E +E + NL Q A+ Sbjct: 122 QLLKAQGITRLNILEYITENQD--------TQQAQKFEKDENKQESILEKYCINLTQEAK 173 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G IDP+IGR+KE+ER ++VL RR+KNNPLLVGE GVGKTAIAEGLA + Q + P + Sbjct: 174 EGKIDPIIGRDKEIERCLEVLLRRKKNNPLLVGEPGVGKTAIAEGLAIVLNQENNP--LF 231 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 I+ L++G+L+AGTKYRGDFEKR KAL +++ + N ILFIDEIH +IGAGA + G + Sbjct: 232 GNEIFMLNMGALVAGTKYRGDFEKRIKALSEEVLERKNVILFIDEIHMLIGAGATNSGSM 291 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DA+NL+KP+L SGK+R IG++TY E+ N +KD+A +RRF KID+ EPS EE V I+ G+ Sbjct: 292 DASNLLKPMLGSGKLRCIGASTYAEYRNFLDKDKAFSRRFAKIDVDEPSQEEAVLILQGV 351 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTV 421 K YE HH+V Y + +R AVEL+ +Y++DR LPDKAIDVIDE GA +L S + V Sbjct: 352 KKYYEKHHNVIYPLETLRLAVELSSRYLHDRFLPDKAIDVIDEVGAAYKLASKSGK---V 408 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 +++ I+ +VA++A+IPE ++ D++ LKNL L+ +FGQD AI+ + A+K RAGL Sbjct: 409 SLSSIKQMVAKMAKIPEIEATKDDKNLLKNLQKHLQSRIFGQDLAIKEIVTALKRNRAGL 468 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYV 541 G +KP+GSFLF+GP+GVGKTE+ +++KALGI R DMSEYME+++ S LIGAP GYV Sbjct: 469 GAPNKPIGSFLFSGPSGVGKTELAKEIAKALGINFERIDMSEYMEKYSSSGLIGAPAGYV 528 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+D+GG+LT+ + K+PH +LLLDEIEKAHPDV NI LQVMDN LTDNNG ADF +V+L Sbjct: 529 GYDKGGILTEMIKKNPHTLLLLDEIEKAHPDVLNIFLQVMDNAKLTDNNGESADFSSVIL 588 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 +MT+N G +E ++G QD+ IK FTPEFRNRLD I+ F+ LS I ++ Sbjct: 589 IMTSNVGSKEA--PTLGF-TQDSVAKFNSAIKDNFTPEFRNRLDAIVAFNPLSETEILKI 645 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 V+K I +L Q+ K + + + + A+ LA+ GY+ +GARP+ VIQ+ +K PL++ +L Sbjct: 646 VEKNINDLNKQIAPKNIHILLDKSAKEQLAKLGYNPELGARPLGLVIQEKIKNPLSDLML 705 Query: 722 FGSLVDGGQVTVALDKEKNELTYGFQ----SAQKHKAEAAH 758 FG L GG+V + +K+ + +Y + S K K + +H Sbjct: 706 FGELEKGGEVIFSYNKKSDSFSYKTKQNSPSNDKIKTKRSH 746 >UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6QBZ7_SULNB Length = 729 Score = 669 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 340/745 (45%), Positives = 497/745 (66%), Gaps = 17/745 (2%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 M++ L A A+E+RHE++TVEH+ L+++ + E L +L L + + Sbjct: 1 MISIALNDVFKNAVKYAKENRHEYLTVEHVFLSVVRSEEGIEILSTLDANLEILEEGIVE 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 I + +P+ +E + T++ R + + H+ S+GR E + ++L AIF ++ S A Sbjct: 61 HIHK---TIPSLKEAVEPFETVALSRAINDMMTHIHSAGRTEASIGDMLAAIFMQEHSYA 117 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 YL++K ++R+D++ ISH + + +Q +++ A E +E FT L LA Sbjct: 118 VYLMKKEGIARVDILEVISH---------NREDHAQTETDKSAKEETVLEQFTMELVALA 168 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G IDP++GR E+ R +Q LCRR+KNNPLLVGE GVGKTAIAEGLA +I +GDVP+V+ Sbjct: 169 KTGKIDPVVGRVDEINRVMQTLCRRKKNNPLLVGEPGVGKTAIAEGLALKISEGDVPDVI 228 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 D +Y+LD+G+L+AGTKYRGDFEKR K ++ +L Q ++ILFIDEIHT++GAGA SGG Sbjct: 229 KDAKVYALDMGALIAGTKYRGDFEKRLKGIINELSQMDDAILFIDEIHTMVGAGATSGGS 288 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+NL+KP L+ G ++ IG+TTY E+ N F+KD+AL+RRF KID+ EPS+E+T I+ G Sbjct: 289 MDASNLLKPALARGDLKCIGATTYAEYRNFFDKDKALSRRFAKIDVEEPSVEDTFTILKG 348 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 ++ KYE HH++++T +A+++A++L+VKY++DR LPDKA+D+IDE GA L Sbjct: 349 VQHKYEDHHNIKFTDEALQSAIDLSVKYLHDRFLPDKAMDIIDEVGAHFMLKGAEG--VI 406 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V DIE VA++ ++P + D LK L L + GQ++AIE L AIK + AG Sbjct: 407 VKPKDIEESVAKMMKLPSTVIGTDDTKKLKTLEKDLSAHIIGQNEAIEELATAIKRSYAG 466 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 L ++P+GSFLF GPTGVGKT + QL++ + + R DMSEYME HT+SRL+GAPPGY Sbjct: 467 LNAPNRPIGSFLFVGPTGVGKTALATQLAETMHVHFERIDMSEYMEAHTISRLVGAPPGY 526 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG++QGGLLT+ + KHPH VLLLDEIEKAHPD+ NILLQVMD LTDNNG +DF+NV+ Sbjct: 527 VGYEQGGLLTEMIKKHPHTVLLLDEIEKAHPDIMNILLQVMDGAKLTDNNGVVSDFKNVI 586 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L+MT+N G +E ++ ++DNS + +K F PEF NRL ++ F+ L + + Sbjct: 587 LIMTSNIGTKE---ANVMGFNKDNSMKTDKALKAFFAPEFMNRLSAVVEFNTLDLETLVS 643 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +VD + +L + L K + ++VS++A+ +LA +GYD GAR +ARVI + +K+ L E+ Sbjct: 644 IVDVELDKLNLMLKPKNIKVKVSKKAKEYLANEGYDERYGARHIARVIDEKIKEALTEEI 703 Query: 721 LFGSLVDGGQVTVALDKEKNELTYG 745 LFG L GG V V L K + Sbjct: 704 LFGRLKKGGLVKVGLKNGKLTFEFS 728 >UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteria RepID=A4FF35_SACEN Length = 838 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 291/809 (35%), Positives = 442/809 (54%), Gaps = 75/809 (9%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 ++ Q+ + L A AR H+ + H+L A + RE LE VD + ++ Sbjct: 40 LMTQKTQELLAGAADYARGLGHDDLDALHVLWAATKEATTREMLEGVQVDPDTFAETVQR 99 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + R T + ++VL A ++ G + +VL+A+ + +S+A Sbjct: 100 QL-----PAAREAASRAPALTPAGRKVLVDAYQVARALGSTYIGPEHVLLAMSASPDSEA 154 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 LL + + + S+ + + E+ G ++ + +L A Sbjct: 155 GRLLASAGATPEEFR-------VSAGGARRSEAATGQATAERDSGTPTLDKYGQDLTARA 207 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G +DP++GR E+E+ I+VL RR KNNP+LVGE+GVGKTAI EG+A RI G VP V+ Sbjct: 208 RDGELDPVVGRADEIEQTIEVLSRRTKNNPVLVGEAGVGKTAIVEGIAQRIADGQVPHVL 267 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASGG 299 I LD+ S+LAGT+YRGDFE+R ++ ++ + I+FIDE+HT++GAG A G Sbjct: 268 TGKRIVQLDLSSMLAGTRYRGDFEERMTKVIDEISANSGEVIVFIDELHTLVGAGGAEGA 327 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 VDA N++KP L+ G++ V+G+TT E+ EKD AL RRFQ + + EPS+E+T+++++ Sbjct: 328 -VDAGNMLKPRLARGELHVVGATTLDEYRKNIEKDAALERRFQPVQVPEPSVEDTIEVLD 386 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL-------- 411 L+ +Y HH VRYT +AV AA L+ +YI DR LPDKAID++D+AGAR RL Sbjct: 387 RLRDRYAEHHRVRYTDEAVAAAARLSDRYIADRFLPDKAIDLLDQAGARKRLSVVGPSAD 446 Query: 412 ----------------------------------------MPVSKRKKTVNVADIESVVA 431 V +DI VV+ Sbjct: 447 ELEQRIQRLEREKDRSVADEDYERASALRDEIGVAQAELEANRDAGVPEVTESDIAEVVS 506 Query: 432 RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 R +P +++ +R L+NL L V GQD A+ AL A++ +R+G+G+ ++PVGSF Sbjct: 507 RATGVPVSRLTEQERTRLRNLEGELHRRVIGQDDAVRALARAVRRSRSGVGNANRPVGSF 566 Query: 492 LFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 LF GPTGVGKTE+ L++ L + ++R DMSE+ ERH +RLIGAPPGYVG+ + G Sbjct: 567 LFLGPTGVGKTELAKALAETLFGDEDRMIRLDMSEFQERHNAARLIGAPPGYVGYGEAGE 626 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT+AV + P++V+LLDE+EKAHPDVFN LLQV+++G LTD GR DF N V++MT+N G Sbjct: 627 LTEAVRRRPYSVVLLDEVEKAHPDVFNTLLQVLEDGRLTDGQGRTVDFTNTVVIMTSNLG 686 Query: 609 VRETERKSIGLIHQDNSTDA--------MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 KS GL +A M +K+ F PEF NR+D ++ F L+ + +H Sbjct: 687 SEVISSKSGGLGFSAAQDEADESLHDRLMPRLKEAFRPEFLNRIDEVVVFRKLTAEQLHD 746 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 + D + + +L + + A + +AE+G+ GARP+ R I+ ++ +A+ + Sbjct: 747 IADLLLDGTRKRLAAMEIGIGFDDAAVDLIAERGHQPEFGARPLRRTIERDVDDRIADLV 806 Query: 721 LFGSLVDGGQVTVALDKEKNELTYGFQSA 749 L G L G V V + +LT+ Sbjct: 807 LDGELEAGSAVHVGV--RDGQLTFEVTQR 833 >UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogaceae RepID=A7HJU2_FERNB Length = 741 Score = 668 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 284/745 (38%), Positives = 441/745 (59%), Gaps = 26/745 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + L +R + EH+LL +L N A + L +VD ALR+++E Sbjct: 8 FTENAQEILQSVNDVLNRYRQNQLAPEHILLTMLENTKTAAVDILTFLNVDTDALRRDVE 67 Query: 60 AFIEQTTPVLPASEE-ERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 I + T +V+ A + G +V ++L+A+ E+ Sbjct: 68 RIISSKGGYYYSGSGGTNQIYITPDTTKVINEAKREAKRMGDEKVGTDHLLLAMAIVPET 127 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 LL K+ V++ + + I + ++ + + FT NL + Sbjct: 128 TTYRLLSKYGVTQDALYSAIKQLRMQRTYSE-------------EENIDILAKFTENLTE 174 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 +A+ G + P++GRE E+ R I++L R+ KNNP+L+G+ GVGKTAI EGLA RIV DVPE Sbjct: 175 MAKNGQLMPVVGRENEINRMIEILGRKIKNNPVLIGDPGVGKTAIVEGLAQRIVNKDVPE 234 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + TI LD+ L+AGTK+RG+FE+R K L+ L++ T+ ILFIDE+HT++GAGAA G Sbjct: 235 FLKNKTILKLDLARLVAGTKFRGEFEERLKKLIDVLKKRTDVILFIDELHTVVGAGAAEG 294 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA N++KP L+ G +RVIG+TT +E+ EKD+ALARRFQ I + EPSIEET++I+ Sbjct: 295 A-LDAGNILKPELARGTLRVIGATTVEEYRKHIEKDKALARRFQVIFVPEPSIEETIEIL 353 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK K+E H+V + KA+ A +++ +YI DR LPDKA+D++DEA ARA++ Sbjct: 354 KGLKAKFEEFHNVSISDKAIEFAAKMSARYITDRFLPDKAVDLVDEAAARAKIDGKK--- 410 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 + DI SV+ R IP + +++ +KNL + Q++A++ ++ AIKM+R Sbjct: 411 -EIVEEDIASVIERWTGIPVGKIMGDEKEKIKNLEKIIHEKFVDQEEAVKIVSNAIKMSR 469 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIG 535 AG+ + +P+G FLF GPTGVGKTE+ +L+ L L+R DMSEYME+H+V+RLIG Sbjct: 470 AGIRNPKRPLGVFLFLGPTGVGKTELAKRLADVLFGSEKALIRIDMSEYMEKHSVARLIG 529 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGYVG+++GG LT+ V + P++V+L DEIEKAHP+VFN+LLQ+ D+G LTD G D Sbjct: 530 APPGYVGYEEGGQLTEQVRRRPYSVVLFDEIEKAHPEVFNVLLQLFDDGRLTDGKGTTVD 589 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 FRN +++MT+N G + EE++K F PE NR+D + F L Sbjct: 590 FRNTIIIMTSNIGSDVIMQDIEEGFEDLIPRHIEEEMRKYFRPELINRIDAAVVFKPLKK 649 Query: 656 DVIHQVVDKFIVELQVQL--DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + I ++++ + EL +L K + + + + R +LA +GY +MGARP+ R+ ++ ++ Sbjct: 650 EHIKEIIEIYTKELNERLIDSDKDIKVVLDESMREYLATEGYVPSMGARPLRRLFENTVE 709 Query: 714 KPLANELLFGSLVDGGQVTVALDKE 738 LA ++ + +G V ++ Sbjct: 710 FKLAELIIDEKVKEGQTVKFIWEEG 734 >UniRef50_P37571 Negative regulator of genetic competence clpC/mecB n=137 Tax=Bacteria RepID=CLPC_BACSU Length = 810 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 286/818 (34%), Positives = 449/818 (54%), Gaps = 85/818 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + L +A A H + EH+LL L+ A +AL+A + +++E+E Sbjct: 6 FTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + I + + + T ++V++ ++ + G + V ++L+ + E E Sbjct: 66 SLIGRGQEM------SQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGV 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L VS + S++ GS +++ +L + Sbjct: 120 AARVLNNLGVSLNKARQQVLQLLG------SNETGSSAAGTNSNANTPTLDSLARDLTAI 173 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ +DP+IGR KE++R I+VL RR KNNP+L+GE GVGKTAIAEGLA +I+ +VPE+ Sbjct: 174 AKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEI 233 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D + +LD+G+++AGTKYRG+FE R K ++ ++ Q N ILFIDE+HT+IGAG A G Sbjct: 234 LRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGA 293 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA+N++KP L+ G+++ IG+TT E+ EKD AL RRFQ I + +PS++E++QI+ Sbjct: 294 -IDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQ 352 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YEAHH V T A+ AAV+L+ +YI+DR LPDKAID+IDEAG++ RL + Sbjct: 353 GLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPN 412 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF----------GQDK---A 466 + V + +S +L++ RL+ V GQ+ Sbjct: 413 LKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVT 472 Query: 467 IEALT------EAIKMARAGLGHEHKPVGS------------------------------ 490 ++ + + +++ K + Sbjct: 473 VDDIAMVVSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLK 532 Query: 491 --------FLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPG 539 F+F GPTGVGKTE+ L++++ + ++R DMSEYME+H+ SRL+G+PPG Sbjct: 533 DPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPG 592 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+D+GG LT+ V + P++V+LLDEIEKAHPDVFNILLQV+++G LTD+ GR DFRN Sbjct: 593 YVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNT 652 Query: 600 VLVMTTNAGVRETERK--------SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 +L+MT+N G E +R H+D M E+K+ F PEF NR+D II F Sbjct: 653 ILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFH 712 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L + ++V +L +L ++ +S+E++ A+ +AE+G D GARP+ R IQ + Sbjct: 713 SLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKH 772 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 ++ L+ ELL G++ G + LD E E + Sbjct: 773 VEDRLSEELLRGNIHKGQ--HIVLDVEDGEFVVKTTAK 808 >UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogaceae RepID=A5IMI3_THEP1 Length = 791 Score = 666 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 287/800 (35%), Positives = 460/800 (57%), Gaps = 77/800 (9%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEA 60 ++ + + +R ++ EH+LLA+L + E L+ +VD+ L+ E+E Sbjct: 8 TEKAQKVMMSIQDIMTRYRQNQLSSEHILLAILEEGNNVGVELLKELNVDINRLKDEVEV 67 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 FI + +P T + V+++A + G +++ ++++ + +S A Sbjct: 68 FIGKYGVRVPEGASVSQIFITPDARHVIEKAREEARRMGDSKIGTEHLILGMVLSPDSTA 127 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 +L ++ V+ V I ++A E + FT +L QLA Sbjct: 128 FRILSRYGVTPERVYEAIRKIR-------------STGKTDEAENVEALARFTMDLTQLA 174 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R + P++ REKE+ R IQ+L RR KNNP+L+G+ GVGKTA+ EGLA RIV+G VP + Sbjct: 175 REKKLMPVVDREKEIRRVIQILSRRTKNNPVLIGDPGVGKTAVVEGLAQRIVEGKVPLFL 234 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASGG 299 + + LD+G L+AGT++RGDFE+R K LL +L + ILFIDE+HT++GAGAA G Sbjct: 235 RNVRVLKLDMGRLVAGTRFRGDFEERLKRLLDELKRKKGEVILFIDEVHTVVGAGAAEGA 294 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L++G+I++IG+TT +E+ EKDRAL RRFQ + + EP++E+T++I+ Sbjct: 295 -LDAANIMKPELTTGEIQIIGATTVEEYRKYIEKDRALERRFQPVIVEEPTVEQTIEILK 353 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM------- 412 GL+ +E HH V+ T A+ A +L+ +YI +R LPDKA+D+IDEA A RL Sbjct: 354 GLRKVFEEHHHVKITDDALETAAKLSARYITNRFLPDKAVDLIDEAAAYVRLESSYPSEE 413 Query: 413 ----------------------------------------------PVSKRKKTVNVADI 426 K + V+ + Sbjct: 414 LLKLEEEIKNLEEKINDAVVKGEYEEAAKLKVELQRLKNEYEEKRKKQEKVEPVVDENVV 473 Query: 427 ESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 +V + IP + +S+R+ L L + + + Q++A++ + I+ AR G+ + + Sbjct: 474 ARIVEQWTGIPVSRIMESEREKLLKLEEFIHQRLVNQEEAVKIVARTIRRARVGIKNPRR 533 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGF 543 P+G FLF GPTGVGKTE+ L+ L ++R DMSEYME+H+V+RLIGAPPGYVG+ Sbjct: 534 PIGVFLFLGPTGVGKTELARTLADVLFGSEDAMIRLDMSEYMEKHSVARLIGAPPGYVGY 593 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 ++GG LT+AV K P++V+LLDEIEKAHPDVFNILLQV ++G LTD G DFRN +++M Sbjct: 594 EEGGQLTEAVRKRPYSVILLDEIEKAHPDVFNILLQVFEDGRLTDGKGNTVDFRNTIIIM 653 Query: 604 TTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVD 663 T+N G + S + E++ F PEF NR+D I++F L+ + + ++V+ Sbjct: 654 TSNIGSEKILEMSEN----GVRIEIERELRNTFKPEFLNRIDAIVYFKPLTMEEVKKIVE 709 Query: 664 KFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFG 723 + +LQ L +K +S+E+++ A+++LAE GY ++GARP+ R+I+ L+ +A+++L G Sbjct: 710 IMVRQLQEILKEKNISIELTERAKDYLAEAGYVPSLGARPLRRIIELELESMIADKILEG 769 Query: 724 SLVDGGQVTVALDKEKNELT 743 + +G +V V D+ ++ Sbjct: 770 EIKEGDRVLVDADEYGLKIE 789 >UniRef50_C9KP02 Negative regulator of genetic competence ClpC/MecB n=3 Tax=cellular organisms RepID=C9KP02_9FIRM Length = 840 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 303/828 (36%), Positives = 452/828 (54%), Gaps = 80/828 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 ++ A ARE +++ EH+LL LL A AL+A + A+ Q +E Sbjct: 7 FTSRAIKAIEFAQYAARELEQDYIGTEHILLGLLHEEGSVAFAALQAAGLTFDAVMQRVE 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 A + + T +RV++ AV Q+ G N + ++L+++ E E Sbjct: 67 AMVAGDAEY-----PSDNPYYTPRAKRVMEGAVEEAQTLGHNYIGTEHILLSLLEETEGA 121 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA LL V + + P +P S+ + + ++ + NLN + Sbjct: 122 AAELLIGMGVDIDALQGEVLDRIDHPHPEGDGEP-SRAEKAKGRQAPQLIKKYGRNLNDM 180 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ +DP+IGR+KE++R IQ+L RR KN P+L+GE GVGKTAIAEGLA RIV+G VP + Sbjct: 181 AKEDRMDPVIGRDKEIQRVIQILARRTKNTPILLGEPGVGKTAIAEGLAQRIVEGSVPYM 240 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D + SL + SL+AG KYRG+FE+R K L+ ++ QD ILFIDE+HT++GAGAA G Sbjct: 241 LQDKKVVSLSLASLVAGAKYRGEFEERLKGLIDEVRQDGTIILFIDEMHTLVGAGAAEGA 300 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP LS G+I++IG+TT E+ EKD AL+RRFQ I + EPSIE+ +I+ Sbjct: 301 -LDAANILKPALSRGEIQIIGATTLDEYKKHLEKDAALSRRFQTILVEEPSIEDAKKILM 359 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ KYEA H A+ AAV L+ +YI DR LPDKAID++DEA ++ R+ V++ +K Sbjct: 360 GLRGKYEAFHCAHIEDAAIEAAVRLSHRYITDRFLPDKAIDLMDEAASKVRMKQVAQPEK 419 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL----------------------- 456 + + + +++ ++ Sbjct: 420 LQEIRARLEKLGVEKEAAISAQDYERAARIRDDEQKVKDELEEAKRRFEKRGKSRITVTA 479 Query: 457 --KMLVFGQD-------------------------------KAIEALTEAIKMARAGLGH 483 V Q +A+EA+++AI+ ARAGL Sbjct: 480 DDIADVVAQWTGVPVRQIAAKESDRLLHMEKILTRRVVGQQEAVEAVSKAIRRARAGLKD 539 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGY 540 +P+GSFLF GPTGVGKTE+ LS+AL ++RFDMSEYME++ VSR++GAPPGY Sbjct: 540 PKRPIGSFLFLGPTGVGKTELAKALSEALFGTEDAIIRFDMSEYMEKYAVSRMVGAPPGY 599 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+++GG LTDAV + P++++LLDEIEKAHPDVFN+LLQV+D+G LTD GR DFRN V Sbjct: 600 VGYEEGGQLTDAVRRKPYSIILLDEIEKAHPDVFNVLLQVLDDGRLTDGKGRTVDFRNTV 659 Query: 601 LVMTTNAGVRETERKS------------IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNII 648 ++MT+NAG ++ + + E++ IF PEF NR+D +I Sbjct: 660 IIMTSNAGATLLKKSAPALGFAVGSGDEKQEAEDAAKKRVLGEVRHIFKPEFLNRIDELI 719 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F L + + +++D + +++ +L +K + LEVS A+N L EKG D GARP+ R I Sbjct: 720 VFHPLGREELSKIIDILLRDVRTRLAEKEIRLEVSPAAKNVLVEKGTDFKYGARPLKRAI 779 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 Q ++ +A LL G + V + K + + ++ Sbjct: 780 QKLIEDEIAEHLLARDFKRGDTIQVRKNGAKLDFVRKETEKDRKDSKE 827 >UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit clpC n=90 Tax=Bacteria RepID=CLPC_STAHJ Length = 824 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 272/828 (32%), Positives = 444/828 (53%), Gaps = 91/828 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L + + L A A H + EHLLL L+ P A + LE+ ++ + +E+E Sbjct: 6 LTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I ++ T ++V++ ++ + N V ++L+ + E E Sbjct: 66 KLIGHG------QDQTGTLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGV 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA + +++ + S + ++ + ++ ++ +L + Sbjct: 120 AARVFANLDLNITKARAQVVKALG------SPEMSNKNATANKSNNTPTLDGLARDLTVI 173 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G +DP++GR+KE+ R I+VL RR KNNP+L+GE GVGKTAIAEGLA IV +VPE Sbjct: 174 AKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPET 233 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + SLD+G+++AGTKYRG+FE+R K +++++ Q N ILFIDE+HT++GAG A G Sbjct: 234 LKGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGA 293 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA+N++KP L+ G+++ IG+TT E+ EKD AL RRFQ I + EP++E+T+ I+ Sbjct: 294 -IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIAILK 352 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YEAHH + + +A+ AA +L+ Y++DR LPDKAID+IDEA ++ RL + Sbjct: 353 GLRDRYEAHHRINISDEALEAAAKLSDCYVSDRFLPDKAIDLIDEASSKVRLKSHTTPN- 411 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA------ 473 N+ +IE + ++ + +V + + NL D+ L + A Sbjct: 412 --NLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEDAKNEWKTTQGDQST 469 Query: 474 ----------------IKMARAGLGHEHKPVGSFLFAGPTGVG----------------- 500 I + + + + +G Sbjct: 470 SLSKEDIGEVIAGWTGIPLTKINETESDRLLNLEQTLHDRVIGQNDAVTSISKAVRRARA 529 Query: 501 ---------------------KTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGA 536 KTE+ L++++ ++R DMSE+ME+H VSRL+GA Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGA 589 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG D+GG LT+ V + P++V+L DEIEKAHPDVFNILLQV+D+G LTD GR+ DF Sbjct: 590 PPGYVGHDEGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDF 649 Query: 597 RNVVLVMTTNAGVRETERK--------SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNII 648 RN V++MT+N G +E + + S G ++ M+E+K F PEF NR+D+II Sbjct: 650 RNTVIIMTSNVGAQELQDQRFAGFGGGSEGHDYETIRKTMMKELKNSFRPEFLNRVDDII 709 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F LS D + ++V + +L +L ++ +++ V+ +A+ +AE+GYD GARP+ R I Sbjct: 710 VFHKLSKDELKEIVTMMVNKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAI 769 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 Q ++ L+ +L G+ ++G +V + D + +E Y ++ Sbjct: 770 QKTVEDNLSELILDGNQIEGKEVVI--DHDGDEFKYNINEKNNGISDE 815 >UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit n=5 Tax=Campylobacterales RepID=A8EW19_ARCB4 Length = 737 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 364/754 (48%), Positives = 517/754 (68%), Gaps = 24/754 (3%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 M+++EL A + A+ +HE++TVEH+ L L+++ + VD L EL++ Sbjct: 1 MISKELRHIFAQAVSYAKSSKHEYLTVEHVFLMLINDQTIENLFIDLGVDTNILFNELKS 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +I++ TP+LP + + T+S + V H QSSG+ ++ VAI +++S + Sbjct: 61 YIDENTPLLPNDANDEPIE-TVSLSSTIDYMVSHTQSSGKTNANVEDMFVAILKDEKSYS 119 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 YLL+K+ + R+D++ ISH + ++E + E+ ++ ++ L +A Sbjct: 120 TYLLKKYGIQRVDILEEISH-----------KDEDEQKNDENSENEKVLDKNSSELVSIA 168 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G IDP+IGR++E+ R I++L RR+KNNP+LVGE GVGKTAIAEGLA +I Q VPE + Sbjct: 169 KKGEIDPVIGRDREISRVIEILSRRKKNNPILVGEPGVGKTAIAEGLALQIAQKKVPEFL 228 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 D ++SLD+GS++AGTKYRGDFEK+ K+LLK++ + N+ILFIDEIHTI+GAG+ G Sbjct: 229 LDSKVFSLDMGSMIAGTKYRGDFEKKLKSLLKEVSKIKNAILFIDEIHTIVGAGSVGGSA 288 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+N++KP+L++GK+R IG+TT+ EF N F KD+AL+RRF K+D+ EPSIE+++ I+ G Sbjct: 289 MDASNILKPMLANGKLRCIGATTFSEFRNDFSKDKALSRRFAKVDVEEPSIEDSILILEG 348 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR------LMPV 414 LK KYE +H V+Y+ A+++AVEL+ KYI DR LPD AIDVIDE GA + L Sbjct: 349 LKSKYEEYHGVKYSKSAIQSAVELSKKYITDRFLPDCAIDVIDEVGAAKKISLATTLKTK 408 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 ++ T+ D+E +++++A IP KS +++D LKNL ++ VFGQD AI + +AI Sbjct: 409 AESNITITSKDVEEIISKMAHIPPKSATKTDLSLLKNLEKNMQKRVFGQDTAISTIVQAI 468 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 534 K +AGLG + KP+GSFLF GPTGVGKTEV +LS +GI RFDMSEYME HTVSRLI Sbjct: 469 KRNKAGLGLDKKPIGSFLFTGPTGVGKTEVARELSLQMGIHFERFDMSEYMEAHTVSRLI 528 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAP GYVGF+QGGLLT+A+ KHPH VLLLDEIEKAHPD+ +ILLQVMDN LTDN+G KA Sbjct: 529 GAPAGYVGFEQGGLLTEAIRKHPHTVLLLDEIEKAHPDLMSILLQVMDNAQLTDNSGNKA 588 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 DF+NVVL+MT+N G E +G + + + I K F PEFRNRLD ++ F+ L+ Sbjct: 589 DFQNVVLIMTSNLGATEA--NVMGFAKNEKLNE-NKAINKFFAPEFRNRLDAVVTFESLN 645 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 DV+ +VV KFI +L+ QL K + +E+S +A+ LA GYD+AMGARP+ +VI D +K Sbjct: 646 IDVVSKVVGKFIEDLEKQLVDKKIKIEISVKAKKELAILGYDKAMGARPLNKVISDKIKN 705 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 PL +E+LFG L GG V + + NE + F + Sbjct: 706 PLTDEILFGKLKKGGIVKIDYN---NEFIFNFSN 736 >UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=45 Tax=root RepID=CLPC_GUITH Length = 819 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 284/801 (35%), Positives = 444/801 (55%), Gaps = 88/801 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++ + +A AR H F+ E +LL L+ + A + L++ V+L R E+E Sbjct: 5 FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDARVEVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + + T +RVL+ ++ + G N + ++L+ + E E Sbjct: 65 KIIGRG-----SGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGV 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L + V + + + + G +E F +NL Q Sbjct: 120 AARVLENLALDLTKVRTQVIRLLGDTAEVSA-------TNGQTKGKTPTLEEFGSNLTQK 172 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP+IGR+KE+ER IQ+L RR KNNP+L+GE GVGKTAIAEGLA RI DVP++ Sbjct: 173 AAEGKLDPVIGRQKEIERVIQILGRRTKNNPILIGEPGVGKTAIAEGLAQRINNRDVPDI 232 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D + +LDIG L+AGTKYRG+FE+R K ++ ++ N IL IDE+HT+IGAGAA G Sbjct: 233 LEDKRVVTLDIGLLVAGTKYRGEFEERLKKIIDEIRVANNVILVIDEVHTLIGAGAAEGA 292 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G+++ IG+TT +E+ EKD AL RRFQ + + EPS+EET++I+ Sbjct: 293 -IDAANILKPALARGEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETIEILY 351 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVE-----LAVKYINDRH-----------------LPDK 397 GL+ +YE HH + + +A+ AA + +A +++ D+ LP Sbjct: 352 GLRDRYEKHHKLVISDEALSAAAKFADQYIADRFLPDKAIDLIDEAGSRVRLMNSQLPPA 411 Query: 398 AIDVIDE-------------------------------------AGARARLMPVSKRKKT 420 A ++ E A ++ +K Sbjct: 412 ARELDKELREILKQKDEAVRSQDFETAGQLRDREMEIKAQIAAIAHSKKGDEENTKEVSV 471 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V DI +VA IP +++S+ + L + + L + GQD+A+ A+++AI+ AR G Sbjct: 472 VTEEDIAQIVAAWTGIPVNKMTRSESEKLLQMEETLHGRIIGQDEAVVAVSKAIRRARVG 531 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAP 537 L + ++P+ SF+F+GPTGVGKTE+T L+ ++R DMSEYMERHTVS+LIG+P Sbjct: 532 LKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSP 591 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GG LT++V + P+ V+L DEIEK HPDVFN+LLQ++++G LTD+ GR DF+ Sbjct: 592 PGYVGYNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFK 651 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTD-----------AMEEIKKIFTPEFRNRLDN 646 N +L++T+N G + E+ GL + EE+K+ F PEF NRLD Sbjct: 652 NTLLILTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDE 711 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 II F L+ D + ++ + + E+ ++ +KG+ LEV+ + L +GY+ GARP+ R Sbjct: 712 IIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRR 771 Query: 707 VIQDNLKKPLANELLFGSLVD 727 + L+ L+ E L + + Sbjct: 772 AVMRLLEDTLSEEFLAEKIKE 792 >UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 Tax=Bacteria RepID=Q2S2Z0_SALRD Length = 875 Score = 655 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 300/838 (35%), Positives = 461/838 (55%), Gaps = 88/838 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + ++ + A H+++ EHLLL L+ A + L DL+ L++ +E Sbjct: 5 FSNRVRDVISYSREEAVRLGHDYIGTEHLLLGLIREGDGIAVKILRNLGCDLLELKEAVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + T+ T ++VL+ + + + ++L+++ + E+ Sbjct: 65 DTVRSTSSSTSVGN----IPLTKQAEKVLKITYLEAKLYKSDVIGTEHLLLSLLRDDENI 120 Query: 120 AAYLLRK-HEVSRLDVVNFISHGTRKDEPTQSSDPGS----------QPNSEEQAGGEER 168 AA +L++ V+ V N + + SS G Q +SE + Sbjct: 121 AAQILQQGFSVTYDAVRNELDSIISGKASSSSSGSGGSGGRLSSGYGQESSESENSNTPV 180 Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++NF +L +LA +DP+IGRE+E++R Q+L RR+KNNP+L+GE GVGKTAIAEGLA Sbjct: 181 LDNFGRDLTELAEEDELDPIIGREEEIKRVAQILSRRKKNNPVLIGEPGVGKTAIAEGLA 240 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 RIV V V+ D I +LD+ SL+AGTKYRG FE+R KA++K+LE + + ILFIDEIH Sbjct: 241 ARIVDRKVSRVLYDKRIVTLDLASLVAGTKYRGQFEERMKAVMKELEDNDDIILFIDEIH 300 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 TI+GAG AS G +DA+N+ KP L+ G ++ IG+TT E+ E D AL RRFQKI + Sbjct: 301 TIVGAGGAS-GSLDASNMFKPALARGDLQCIGATTLDEYRQNIEGDGALDRRFQKIIVDP 359 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 + EETV I++ +K YE HH+VR++ +A+ AV+L+ +YI DR LPDKAIDV+DEAGAR Sbjct: 360 STPEETVNILSNIKSYYEDHHNVRFSEEAIDLAVQLSDRYITDRFLPDKAIDVMDEAGAR 419 Query: 409 ARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF-----GQ 463 L + + + + + V KS + L++ L+ + Sbjct: 420 VHLSNIEVPPEILELEEQIEDVQEEKNQVVKSQRFEEAARLRDKEKTLQEELEEAKQQWH 479 Query: 464 DKA----------------------------------------------------IEALT 471 ++A IE L+ Sbjct: 480 EQAETEVHDVTSEEIAEVVAMMTGIPVDKISEPEQQKLLKMEESLKEHVVGQDEAIEKLS 539 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERH 528 +AI+ RAGL KP+GSF+F GPTGVGKTE+ L++ L L+R DMSEYME+ Sbjct: 540 KAIRRTRAGLKDPEKPIGSFIFLGPTGVGKTELAKVLTEYLFDSQESLIRIDMSEYMEKF 599 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 +VSRL+GAPPGYVG ++GG LT+ V + P++V+LLDEIEKAHPDV NILLQV+D+G LTD Sbjct: 600 SVSRLVGAPPGYVGHEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVSNILLQVLDDGILTD 659 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD----------AMEEIKKIFTP 638 GR+ DFRN +L+MT+N G ++ + G+ + + +K +F P Sbjct: 660 GMGREVDFRNTILIMTSNIGTQDIKSFGQGIGFDQTDGEDMDYTSMKSTVQDALKNVFNP 719 Query: 639 EFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRA 698 EF NRLD++I F+ L+ + I ++D +L + ++ G+ LE + A+ +L ++G+D+ Sbjct: 720 EFLNRLDDVIVFNPLNKENIFDIIDIMSEDLFERAEELGLDLEFDEAAKEFLTDRGFDQK 779 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEA 756 GARP+ R +Q ++ P+A ++L + +G V + D E EL++ + + E Sbjct: 780 YGARPLRRALQKYVQDPMAEDILHDEITEGDTVLITHDGESEELSFEVEEGEAPTEET 837 >UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=59 Tax=Firmicutes RepID=Q046D3_LACGA Length = 838 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 292/822 (35%), Positives = 462/822 (56%), Gaps = 77/822 (9%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEA 60 + + L +A +A+ H + EH+LLAL+ +N A + L +V +R+E+E Sbjct: 22 SDSAKNVLEIAKEQAQNFHHRIIGTEHVLLALVIEANGDAGKLLRERNVTPTLVREEIER 81 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + +S + + + VL A G ++ ++L+ + + + A Sbjct: 82 YTGYG-----SSPKATYMEMSPRLSLVLNFAKQKSDELGTPQIETKHILLGLLASDQILA 136 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSS--DPGSQPNSEEQAGGEERMENFTTNLNQ 178 + +L+ V D+ I+ D ++ D S +++ ++ + NLN+ Sbjct: 137 SLILKNIGVEPRDLSQDINDSFMDDSGEANNIFDVSSATRTKKGKSLTPNLDKVSVNLNK 196 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR G IDP+IGR+KE++R IQ+L RR KNNP+LVGE GVGKTA+A+G+A IV +VP+ Sbjct: 197 RAREGAIDPVIGRDKEIKRVIQILSRRTKNNPVLVGEPGVGKTAVAQGIASAIVNREVPD 256 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 +A + +LD+GSL+AGTKYRG+FE R K +LK++++D + ILF+DE+HT+IGAG A G Sbjct: 257 NLAKKRVMALDMGSLIAGTKYRGEFEDRMKKILKEIQRDGSVILFVDEMHTLIGAGGAEG 316 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA+N++KP L+ G I++IG+TT+ E+ EKD+ALARRFQ++ I EPS EETV I+ Sbjct: 317 A-IDASNILKPSLARGDIQMIGATTFDEYQKYIEKDQALARRFQQVKIGEPSKEETVDIL 375 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELA-----VKYINDRH-------------------- 393 GL+PKYE H+V+ +A++ AVE + +++ D+ Sbjct: 376 KGLRPKYEKFHNVKIEDEAIKDAVEFSTRYIANRFLPDKAIDLIDEASAAVKIQAVGKAD 435 Query: 394 --------LPDKAIDVIDEAGAR------------------------ARLMPVSKRKKTV 421 + I +EA AR+ + +K V Sbjct: 436 PRLTKLDTQINDVIHQKEEAAENQNFVQAAKLRDEENKLTQDRDKLIARVENKNSKKSIV 495 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 + I +V+ +P + +S+ L +L L V GQDKAI A++ AI+ +R+G+ Sbjct: 496 DSNKIAQIVSEWTGVPVTRMKKSETKRLAHLESILHERVIGQDKAISAVSRAIRRSRSGI 555 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPP 538 E++P+GSFLF GPTGVGKTE+ L+ A+ ++R DMSEYM++ S+LIG+ P Sbjct: 556 KDENRPIGSFLFLGPTGVGKTELAKALAAAVFGSERNIIRVDMSEYMDQVATSKLIGSAP 615 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+++GG L++ V ++P++V+LLDE+EKAHPDVFN+LLQV+D G LTD+ GRK DFRN Sbjct: 616 GYVGYEEGGQLSERVRRNPYSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFRN 675 Query: 599 VVLVMTTNAGVRETE-RKSIGLIHQDN------STDAMEEIKKIFTPEFRNRLDNIIWFD 651 +++MT+N G R + K++G + +K+ F PEF NR+D + FD Sbjct: 676 TIIIMTSNLGSRSLQEDKTVGFAADNEDKNKLQQEKVTAAVKQFFRPEFLNRIDETVVFD 735 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L+ + ++V L +L +K V+L++S A + LA+ G+D MGARP+ R IQ Sbjct: 736 SLTKKQLREIVSLMTSHLISRLARKEVTLKISPAALDVLAKDGFDPEMGARPLRRAIQHE 795 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHK 753 L+ +A +L+ + G V V + K + T + K Sbjct: 796 LEDVIAEDLISEKIKAGQTVKVGAHQGKLKFTIVDKDKPLVK 837 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%) Query: 79 QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFI 138 + S + VL+ A Q+ + +VL+A+ E A LLR+ V+ V I Sbjct: 20 SYSDSAKNVLEIAKEQAQNFHHRIIGTEHVLLALVIEANGDAGKLLRERNVTPTLVREEI 79 Query: 139 SHGTRKDEPTQSS 151 T +++ Sbjct: 80 ERYTGYGSSPKAT 92 >UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 Length = 746 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 337/743 (45%), Positives = 499/743 (67%), Gaps = 6/743 (0%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 L++ + + A+ AR +HE+ T EH+L A L P + +E+C ++ ++++L + Sbjct: 3 LDKIVNEIITAAYNEARYCKHEYFTPEHVLYAALFFPEGIDIIESCGGNVKNIKRDLLQY 62 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + E+++ T+ Q +L A HV ++ + + ++ ++I+ E++S A+ Sbjct: 63 FNDNIE----TTEKKEPLETIGLQNILTSAGEHVLAAEKEVIKLGDIFISIYDEEQSFAS 118 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDE-PTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 + LRK + R+D++N+I+HG + EE + +F +L Q A Sbjct: 119 FFLRKQGIRRIDILNYITHGISATMFDYNIEEDSKYLVDEEDTQSVLNIGDFAVDLTQKA 178 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 ++G +DPLIGRE + R IQVL RR KNNP+ VGE GVGKTAI EGLA IV+ VP ++ Sbjct: 179 KMGDMDPLIGREDIIYRTIQVLSRRNKNNPIHVGEPGVGKTAITEGLAKLIVENKVPNLL 238 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 D IYSLD+GS+LAGTKYRGDFE R K LK+++++ I++IDEIHTIIGAG+ SGG Sbjct: 239 KDSKIYSLDMGSILAGTKYRGDFEDRIKNTLKKIQKEDKPIVYIDEIHTIIGAGSVSGGS 298 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DAAN++KP L+SGKI+ IGSTTY E+ IFEKDRALARRFQ+I++ EPS+E+T I++G Sbjct: 299 LDAANILKPFLTSGKIKFIGSTTYDEYKKIFEKDRALARRFQRIEVPEPSVEDTYSILSG 358 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 +K YE H+V Y +A+++AV+L+VKYINDR LPDKAIDVIDE GA RL +K Sbjct: 359 IKEHYEKFHNVIYKEEALKSAVDLSVKYINDRFLPDKAIDVIDETGAYVRLHSSDDKKIV 418 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 ++ IE +A +A+IPE+++SQ + LK+L LK VFGQ++AI++L AIK +RAG Sbjct: 419 IDKVHIEKTIAAMAKIPEQTLSQDETKVLKDLDKVLKKKVFGQEEAIDSLVRAIKRSRAG 478 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 ++K V S LF GPTGVGKTE++ QL+KAL I +RFDMSEY E+HTV+RL+G+PPGY Sbjct: 479 FNEDNKTVASLLFVGPTGVGKTEISKQLAKALNIPFIRFDMSEYQEKHTVARLVGSPPGY 538 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+++GGLLTD + K P+ VLLLDEIEKAHPDV NILLQ+MD TLTDN G+K DF+N Sbjct: 539 VGYEEGGLLTDVIRKTPYCVLLLDEIEKAHPDVLNILLQIMDYATLTDNTGKKTDFKNTT 598 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAM-EEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 ++MT+NAG R + +G + DA+ EE+ +IF+PEFRNRLD+II+F+ ++ + + Sbjct: 599 IIMTSNAGARSVGKALMGFGERIVKKDAISEEVNRIFSPEFRNRLDDIIYFNSMNDKMAY 658 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719 V K + + + QL K + + V+ + WL++KG GAR + R++Q ++K ++ Sbjct: 659 LVAKKVVGQFEKQLLSKDIKINVTDKCYRWLSKKGVSLEYGAREIIRIVQQDIKPYFVDK 718 Query: 720 LLFGSLVDGGQVTVALDKEKNEL 742 +LF ++ + ++ + ++ Sbjct: 719 VLFNDNIENTISIIDVENDSIKI 741 >UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XML9_9HELI Length = 756 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 322/752 (42%), Positives = 493/752 (65%), Gaps = 12/752 (1%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +++EL + L A A++ HE++T+EH+ ALL N + L+ C ++ ++++++ + Sbjct: 4 ISKELNVVLQNAQKEAKDKGHEYLTLEHIFYALLENEKITKTLQDCGGNVEIMKKQIQRY 63 Query: 62 IEQTTPVLP-ASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 ++Q P E+ Q TL+ RV++ + HV+ S R + +++L AI E+++ Sbjct: 64 LKQFLQSYPERQEQGAMPQETLAVTRVIEIMIGHVKGSQRQQAQVSDLLAAILEEEKAFC 123 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A +L ++RL+V+ +I+ +S + E++ +E + TNL Q+A Sbjct: 124 AQILNAQGITRLNVLEYITENQENFSFNKSIKEEVKDEGEKRESA---LEAYCTNLTQMA 180 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G I+PLIGRE E+ R +VL R++KNNPLLVGE GVGKTA+AEGLA +++ P + Sbjct: 181 REGKIEPLIGREVEIRRCFEVLLRKKKNNPLLVGEPGVGKTAVAEGLALQMIATQSP--L 238 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + +Y L++G+L+AGTKYRGDFEKR K L ++ + N ILFIDEIH +IGAGA + G Sbjct: 239 ENTEMYMLNMGALVAGTKYRGDFEKRIKTLTDEVLELGNVILFIDEIHMLIGAGATNSGS 298 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA+NL+KP+L +GK+R IG++TY E+ + +KD+AL+RRF KI++ EPS EE++ I+ G Sbjct: 299 MDASNLLKPMLGNGKLRCIGASTYAEYRSFLDKDKALSRRFAKIEVKEPSREESILILEG 358 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 +K YE +H+V + ++A+ V+L++++++DR LPDKAID++DE GA +L S + Sbjct: 359 VKKHYEKYHNVSFNSEAIELIVDLSIRHLHDRFLPDKAIDIMDEVGASYKLDGKSGK--- 415 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V++ I+ +VA +A+IPE ++ D+ LK L LK +FGQD AI + A+K +AG Sbjct: 416 VSLQSIKKMVATMAKIPEIEATKDDKAVLKGLEKHLKSRIFGQDNAIVEVVSALKRNKAG 475 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 LG +KP+GSFLF+GP+GVGKTE+ +L+KAL I R DMSEYMER + S+LIGA GY Sbjct: 476 LGAPNKPIGSFLFSGPSGVGKTELAKELAKALNINFERLDMSEYMERISSSQLIGAAAGY 535 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+++GG+LT+ + K+PH +LLLDE+EKAHPDV N+ LQVMD G LTDNNG DF +V+ Sbjct: 536 VGYEKGGILTEMIKKNPHTLLLLDEVEKAHPDVLNVFLQVMDYGRLTDNNGESIDFSSVI 595 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L++T+N G +E +G QD + IK F+PEFRNRLD II F+ LS I + Sbjct: 596 LILTSNVGSKEA--PVLGF-KQDTNLRFSSAIKDHFSPEFRNRLDAIIAFNPLSHKEILK 652 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +VDK IV+L Q+ +K V + + + ++ +LA+ G+D +GARP+ VIQ +K L++ + Sbjct: 653 IVDKNIVDLNNQILEKKVEIILDKSSKEYLAKIGFDVELGARPLGLVIQKEIKNILSDAM 712 Query: 721 LFGSLVDGGQVTVALDKEKNELTYGFQSAQKH 752 LFG L GG K K + + + Sbjct: 713 LFGELSKGGVAHFTCVKGKLTHKFLPNNIELK 744 >UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mamiellales RepID=A4S065_OSTLU Length = 781 Score = 651 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 292/751 (38%), Positives = 428/751 (56%), Gaps = 28/751 (3%) Query: 15 ARAREHRHEFMTVEHLLLALLSN-PSAREALEACSVDLVALRQELEAFIE----QTTPVL 69 A++ R EH+LLAL N +AL V A R+ L + Sbjct: 2 DLAKKFRSAECGSEHVLLALTRNRDRTSKALHKHGVTEEATRRALGERAGVSELELMNPF 61 Query: 70 PASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV 129 E + ++V +RA S+ +EV + +A+ E S A + E Sbjct: 62 NKPSAEGLLALSDELKKVFERA-----SASGSEVGSKELALAMIDEPASGARATMAALEG 116 Query: 130 SRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLI 189 L V+ RK+ + + + ++ + + + +L AR G +DP++ Sbjct: 117 CDLKVL-------RKEITGANERELVGAGKKTRNTKKQTLADCSIDLTAEAREGKLDPVL 169 Query: 190 GREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD 249 GR++E+ R +++L RRRK+NP LVGE GVGKTAIAEGLA I +GDVPE + + + SL Sbjct: 170 GRDEEVTRVMRILVRRRKSNPCLVGEPGVGKTAIAEGLAMMIAKGDVPESLKEKRVVSLQ 229 Query: 250 IGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII-GAGAASGGQVDAANLIK 308 IG LLA TKYRG+FE++ K ++++++Q + ILF+DEIH ++ G G +DA NL+K Sbjct: 230 IGLLLADTKYRGEFEEKMKNVMEEVKQAGDIILFVDEIHMLVGAGGTGEDGGMDAGNLMK 289 Query: 309 PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH 368 P L+ G+++ IG+TT E+ EKD AL RRFQ + + EPS E+T+ I+ GLK Y+ H Sbjct: 290 PALARGELQCIGATTIDEYRKHIEKDAALERRFQPVRVIEPSPEQTLTILRGLKDTYQEH 349 Query: 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIES 428 H V +T +A+RAAV L+ +YINDR LPDKAIDVIDEAGA +L P V+ + I Sbjct: 350 HGVSFTDEALRAAVSLSTRYINDRFLPDKAIDVIDEAGALVQLTP--GDSTLVDESHITE 407 Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 VVA+ +P + +S + +L N L V GQ +A+ ++++AI+ ARAGL KPV Sbjct: 408 VVAQWTGVPVQQLSADESLSLMNFEQELGKRVIGQVEAVRSISQAIRRARAGLADASKPV 467 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQ 545 S +F+GPTGVGKTE+ +++ ++R DMSEYME H+VSRLIG PPGY+GF + Sbjct: 468 ASIIFSGPTGVGKTELAKAVAQTYFGAEKAMVRIDMSEYMESHSVSRLIGPPPGYIGFGE 527 Query: 546 GGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTT 605 GG LT+AV +PH+++LLDEIEKAHPDVFNILLQV+++G LTD+ GR DF N +LVMT+ Sbjct: 528 GGQLTEAVRTNPHSLVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFTNAMLVMTS 587 Query: 606 NAGVRETERKSIGLIHQDNS-----TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 N G RE G + T E+ K + PEF NRLD II F L + Sbjct: 588 NIGSREILESMSGEGEDEEKYKKLQTQVKRELGKEYRPEFLNRLDEIIIFRPLERPEVSA 647 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 + D + + + +G++L+ + ++ L G+ GARPM R ++ L+ LA + Sbjct: 648 IADLMLASVSKRALARGITLDFTDSFKSLLYSNGFSPRFGARPMRRCVRGLLENNLAECM 707 Query: 721 LFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 L G G V D ++ ++ + Sbjct: 708 LDGFASSGDTVNFDYDDDQELISVTTANETM 738 >UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ClpA n=1 Tax=Treponema denticola RepID=Q73KU3_TREDE Length = 785 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 325/769 (42%), Positives = 482/769 (62%), Gaps = 37/769 (4%) Query: 5 ELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQ 64 + A A++ HEF+T EHLL A++ NP A E DL + L ++E Sbjct: 8 TVRRIFQDAVEDAKKRNHEFVTPEHLLWAIMFNPKALELFTLSGSDLGYIHDNLNTYLEN 67 Query: 65 TTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLL 124 PV + + + T+ Q V +RA+ + ++ + + +++V++ E+++ ++ + Sbjct: 68 KVPVR-TQDNQAEPIQTVGLQNVFERAILNCNAAEKPVIGINDIIVSLMDEEKNHCSFFM 126 Query: 125 RKHEVSRLDVVNFIS--------------------HGTRKDEPTQSSDPGSQPNSEEQAG 164 ++ + RL ++ +S + + + + N+++ Sbjct: 127 KQSGIDRLRLLQLVSSPDFYDDGKNRSAYEEAEDVQEAQGVKEDSARHNSEEKNTDKSKA 186 Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 + +E FT NL + AR G + P+IGRE+E+ER IQ+LCR++KNNP+ VG +GVGKTAI Sbjct: 187 QKTYLERFTVNLTEKARKGRLSPIIGREEEIERTIQILCRKQKNNPIHVGGAGVGKTAIT 246 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFI 284 EGLA RI VP + + IYSL + LLAG K+RGDFE+R K ++ ++ ++ N+ILFI Sbjct: 247 EGLAQRITANKVPSFLKNANIYSLSLSDLLAGAKFRGDFEERLKRIVSEISREKNAILFI 306 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DEIHTI+ A + GG ++A +L+KP+L++GK+R IG+TT++E++ F KD ALARRFQKI Sbjct: 307 DEIHTIVNA-NSGGGGIEAPDLLKPILANGKVRCIGATTFEEYNKHFTKDAALARRFQKI 365 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 DI EP+ EE V+I+ GL+ YE H V Y+ + + +AV L+ +I DR LPDKAID+IDE Sbjct: 366 DIEEPNEEEAVKILKGLRESYENFHKVHYSDEVLESAVHLSAIHIRDRFLPDKAIDLIDE 425 Query: 405 AGARARLMPVSKRK--------------KTVNVADIESVVARIARIPEKSVSQSDRDTLK 450 AGA ++ ++ V+++DI+ +VA+ A+IPE+ VS ++ + L+ Sbjct: 426 AGALIKIRADKEKNENEADEKGLEETALPEVSLSDIDKIVAKTAKIPEQRVSVNETEKLR 485 Query: 451 NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK 510 + + L +FGQD AIE +T+A+K +RAG + KPV +FLF GPTGVGKTE+ L++ Sbjct: 486 HFEEILSKKIFGQDTAIEGVTKAVKRSRAGFRSKDKPVANFLFVGPTGVGKTELAKTLAE 545 Query: 511 ALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH 570 LGI LLRFDMSEY E+HTVSRLIG+PPGYVGF++GGLLT AV K P+AVLLLDEIEKAH Sbjct: 546 ELGIPLLRFDMSEYQEKHTVSRLIGSPPGYVGFEEGGLLTSAVQKSPNAVLLLDEIEKAH 605 Query: 571 PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST-DAM 629 D++NILLQ+MD TLTDN GRKA F N++L+MT+NAG + IG + S Sbjct: 606 ADIYNILLQIMDYATLTDNQGRKAAFNNIILIMTSNAGSSNIGKPLIGFGGERISESAVD 665 Query: 630 EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNW 689 E ++K FTPEFRNRLD II F L+ V+ ++ K + +++ QL +K +SLE+ + Sbjct: 666 EAVEKTFTPEFRNRLDAIIKFGPLTMQVMSLIIKKEVEKIRSQLAEKEISLELEDDVIPL 725 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 LAEKGY GAR AR+++D PL + +LFG G V + + Sbjct: 726 LAEKGYSEEFGARNAARLVEDEFVTPLTDMILFGETKKGSSVKCQIGDK 774 >UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic n=62 Tax=cellular organisms RepID=CLPAA_SOLLC Length = 926 Score = 647 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 275/833 (33%), Positives = 434/833 (52%), Gaps = 90/833 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++ + +A AR H F+ E +LL L+ + A + L++ ++L R E+E Sbjct: 97 FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVE 156 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + + T +RVL+ ++ + G N + ++L+ + E E Sbjct: 157 KIIGRG-----SGFIAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 211 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L ++ + + S G+ +E + TNL +L Sbjct: 212 AARVLENLGADPTNIRTQVIRMVGE----SSEAVGASVGGGTSGLKMPTLEEYGTNLTKL 267 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP++GR+ ++ER Q+L RR KNNP L+GE GVGKTAIAEGLA RI GDVPE Sbjct: 268 AEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPET 327 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + +LD+G L+AGTKYRG+FE+R K L+++++Q ILFIDE+HT+IGAGAA G Sbjct: 328 IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA 387 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G+++ IG+TT E+ EKD AL RRFQ + + EPS++ET+QI+ Sbjct: 388 -IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILK 446 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YE HH + YT +A+ AA +L+ +YI+DR LPDKAID+IDEAG+R RL ++ Sbjct: 447 GLRERYEIHHKLHYTDEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 506 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ---------------- 463 + + + + L++ LK + Sbjct: 507 ARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALIDKNKEKSKAESEAGD 566 Query: 464 -------DKAIEALT---EAIKMARAGLGHEHKPVGSFLFAGPTGVG------------- 500 + I+ + I + + + + +G Sbjct: 567 AAGPIVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISRAIR 626 Query: 501 -------------------------KTEVTVQLSKALGI---ELLRFDMSEYMERHTVSR 532 K+E+ L+ ++R DMSE+MERHTVS+ Sbjct: 627 RARVGLKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVSK 686 Query: 533 LIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGR 592 LIG+PPGYVG+ +GG LT+AV + P+ V+L DEIEKAHPDVFN++LQ++++G LTD+ GR Sbjct: 687 LIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR 746 Query: 593 KADFRNVVLVMTTNAGVRETER--KSIGLIHQDNSTD---------AMEEIKKIFTPEFR 641 DF+N +L+MT+N G E+ + IG + D EE+K+ F PEF Sbjct: 747 TVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFL 806 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 NRL +I F L+ + ++ D + E+ V+L K + L+V++ R+ + ++GY+ + GA Sbjct: 807 NRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGA 866 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKA 754 RP+ R I L+ +A ++L G + +G V V +D + N S + Sbjct: 867 RPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGNVTVLNGTSGAPSDS 919 >UniRef50_C7HWH6 Negative regulator of genetic competence MecB/clpC n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7HWH6_9FIRM Length = 803 Score = 646 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 307/819 (37%), Positives = 458/819 (55%), Gaps = 83/819 (10%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELE 59 M N +L A + H+++ VEHLLLAL+ S A +ALE + LR + Sbjct: 1 MENNKLNRLTGQARRESYSLSHDYIGVEHLLLALMKTGSLATKALEEAGANYELLRSIVI 60 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + V PA E + +++ RA Q + + ++L+AI ++ +S Sbjct: 61 NNIGKGSAVRPAKE------YSNKVRQIFDRARLFAQKRKKVSASEEDILLAILNDDDSF 114 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + + + + + + + +S E ++ F NLN++ Sbjct: 115 TNLMFMLSGLDKKIIRDNLIRL-----------QNEEKSSNTSNNLSENLKKFAKNLNEM 163 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G IDP+IGRE E+ER IQ+L RR KNNP+L+G+ GVGKTAI EGLA RIV G VP V Sbjct: 164 AEAGKIDPVIGREDEVERVIQILLRRTKNNPILIGDPGVGKTAIIEGLAQRIVDGKVPFV 223 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 M + TI SLD+ S++AGTKYRGDFE R K L +LEQ + +LFIDE H ++GAGA+ G Sbjct: 224 MKEKTIVSLDLASMIAGTKYRGDFEDRLKKLFGELEQREDVVLFIDEFHMVLGAGASE-G 282 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP+L+ G I++IG+TT E+ EKD+AL RR Q + + EP+ ++T++II Sbjct: 283 SMDAANILKPILAKGDIQIIGATTIDEYRKHVEKDQALTRRMQPVHVEEPNKDDTIKIIE 342 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLK KYE HH V T +A++AAV+L+ +YI DR LPDKAIDVIDEA ++ R+ + K Sbjct: 343 GLKDKYEDHHKVEITGEAIKAAVDLSQRYIQDRFLPDKAIDVIDEACSKERIKNYKENKD 402 Query: 420 TV----------------------------------------------------NVADIE 427 V + ++ Sbjct: 403 QVSNKEILDGLIEEKNQAINEQNFEKAASLRDQINEAREKLEKEKEEKKTDLKISFDEVA 462 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 +V+ +++P +++ ++ +L LK V GQDKAI+ ++ AIK AR GL KP Sbjct: 463 KIVSSWSKVPITKLTEDEKQKYMDLDIDLKKEVIGQDKAIDKISHAIKRARVGLKDPKKP 522 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 +GSF+F GPTGVGKT + L+K L L+R DMSEYME+ VSRL+G+PPGYVG++ Sbjct: 523 IGSFIFVGPTGVGKTYLAKSLAKNLFGDMDNLIRMDMSEYMEKFAVSRLVGSPPGYVGYE 582 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 +GG LT+AV KHP++V+L DEIEKAHPD+FN+LLQ++D+G LTD GR DF+N +++MT Sbjct: 583 EGGQLTEAVRKHPYSVILFDEIEKAHPDIFNLLLQILDDGRLTDGQGRTVDFKNTIIIMT 642 Query: 605 TNAGVRETERKS-IGLIHQDNSTDAME--------EIKKIFTPEFRNRLDNIIWFDHLST 655 +N GV + IG D + + IK F PEF NRLD+II F+ L Sbjct: 643 SNVGVSSLNQNPKIGFGTGDVEKEIDDSNKEIINKAIKNAFAPEFLNRLDDIIMFNSLDK 702 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 + I ++ + E + +L G+ + ++ + L+E G+ + GARP+ R I + + Sbjct: 703 NAIKEITKILLDETKERLKNLGIEINYNKRVVDLLSEGGFSKEYGARPLERHITNKIDNQ 762 Query: 716 LANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKA 754 LA E+L G L ++ + + + K + ++ Sbjct: 763 LAEEILEGKLSKDMKINLTVKEGKINFANKKEKIKEEIP 801 >UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n=14 Tax=Rickettsiales RepID=D1AUG7_ANACI Length = 781 Score = 645 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 368/761 (48%), Positives = 515/761 (67%), Gaps = 17/761 (2%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L++ LE SL+ A + A + RHE T+EHLLLAL + R L C V + LR L Sbjct: 14 VLSKNLEASLHRALSIAFDFRHECATLEHLLLALTDDLDVRRVLYVCRVSIDRLRATLIN 73 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F+ + ++ + +P+++F++V+ RA+ H +SG++E+ G NVL IF E++S + Sbjct: 74 FLRYEMSIAM-NQSVTEVRPSMAFEKVVHRAIVHAHASGKDEINGVNVLAEIFLEKDSCS 132 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQ-------------AGGEE 167 L +H V +DVV+ IS +E D G + ++ + E Sbjct: 133 VSFLNEHNVKYIDVVSCISSNEHPEELYDQHDLGKDVDFVKRGAVGFPHISKDVVSKDGE 192 Query: 168 RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGL 227 +E + NLN LA+ G ID +IGR+ E ER I+VL RRRKNNPL VG+SGVGKTAI EGL Sbjct: 193 SLEAYCVNLNVLAKNGKIDYVIGRQYEQERTIEVLLRRRKNNPLYVGDSGVGKTAIVEGL 252 Query: 228 AWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEI 287 A RIV+G++ + IYSLD+GSLLAGT+YRGDFE+R KA+++ +E N++LFIDEI Sbjct: 253 ALRIVEGNIVPQLKCVEIYSLDMGSLLAGTRYRGDFEERIKAVIRAIENKKNAVLFIDEI 312 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HTIIGAG+ SG +DA+NL+KP L+ G IR IG+TTY+E+++ FEKDRALARR+QKI++ Sbjct: 313 HTIIGAGSTSGSPLDASNLLKPALARGSIRCIGATTYKEYNSNFEKDRALARRYQKINVE 372 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 E ++EET+QI++G+K YE +HDV YT++AV+ A EL+ +YI +R LPDKA+DV+DEAG Sbjct: 373 ESTVEETIQILSGIKSYYEIYHDVHYTSQAVKYAAELSDRYIAERMLPDKAVDVLDEAGV 432 Query: 408 RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 A+L K V DIES+++RI IP ++ SD +KNL + LK ++FGQD AI Sbjct: 433 YAKLRSGENGK-VVTGRDIESIISRITEIPCDNLFASDTHKVKNLEENLKQVIFGQDAAI 491 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMER 527 + +AI++A+AGL KP+ S+L AGPTGVGKTE+ QL+K +G++L+RFDMSEYME Sbjct: 492 SQIVDAIRIAKAGLRSHQKPLASYLLAGPTGVGKTELVKQLAKNMGMKLVRFDMSEYMES 551 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 HTV+R+IG+PPGYVG++QGGLLTD + ++ ++VLLLDEIEKAH V+NILLQ+MD G +T Sbjct: 552 HTVARMIGSPPGYVGYEQGGLLTDTIARNQYSVLLLDEIEKAHSSVYNILLQIMDYGCIT 611 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN--STDAMEEIKKIFTPEFRNRLD 645 D GRK FRNVV+V+TTNAG E + ++G + I+KIF PEF NRLD Sbjct: 612 DTYGRKVSFRNVVIVLTTNAGAVEFSQNAVGFDRDRTFHIGSERKAIEKIFGPEFCNRLD 671 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 ++ F +LS DV+ +VV KFI EL+ QL +KGV + + + + +L + G GAR Sbjct: 672 AVVSFSYLSADVMEKVVGKFIAELRDQLSRKGVDISIDKASVEFLTKMGQQDGYGARKAQ 731 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 VI +KK LA E+LFG L GG+V V D +K + +Y F Sbjct: 732 SVIAQKIKKHLALEMLFGKLAYGGRVEVRFDPQKEDFSYEF 772 >UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ClpA n=11 Tax=Bacteroides RepID=A6KY28_BACV8 Length = 742 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 328/746 (43%), Positives = 466/746 (62%), Gaps = 10/746 (1%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 + + A ++A ++RHEF+T EHLL ALL ++AL C L Q + ++ Sbjct: 6 TDSVNYAFASAQSQAMQYRHEFITPEHLLSALLEQVPFQKALAECFCTPEELSQSISEYL 65 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 + +P E E + + + +LQ A + S E+ +++ + ++S A Y Sbjct: 66 SKKVERVP-QEIEYELEISGQLSELLQYAYMTISHSSAEEMDVPHLVQGMLQLEDSWAGY 124 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 LL++ D+ F+S E + E+ N+ T LN+ + Sbjct: 125 LLKE--TVGEDMPEFLSSLISNYEHMNQFQEETSSEQEKSEP----WRNYVTCLNEGLQD 178 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 +PLIGR ELER IQVLCR+ KNNPL VGE GVGKTA+ GLA RI G+VPE + Sbjct: 179 R--NPLIGRNVELERTIQVLCRKEKNNPLHVGEPGVGKTALVYGLAARIEAGNVPERLTG 236 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 C IY LD+G+LLAGT+YRG+FEKR KA+++ + ++ ++I++IDEIH +IGAG G +D Sbjct: 237 CRIYELDLGNLLAGTQYRGEFEKRLKAIMEGIRKEGHAIVYIDEIHNLIGAGRTGDGSMD 296 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 A+N++KP L G+IR IGSTTY+EF+ F + R L RRFQ+IDI EP IEET+ I+ GLK Sbjct: 297 ASNMLKPYLEGGEIRFIGSTTYEEFNRYFSRSRGLVRRFQQIDIQEPGIEETIHIVEGLK 356 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 +YE H V Y + AV A +YI+DR LPDKAID++DEAGA + P +TV+ Sbjct: 357 ERYETFHGVVYEEGVIAYAVTAAARYISDRFLPDKAIDLVDEAGAYREIHPTDTETQTVD 416 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 A I ++ARI ++ ++ + D TL+ L +R+ ++GQ++A+ + EA++MA+AGL Sbjct: 417 KALITDILARICKVDVLAMKEEDNATLETLHERISAKIYGQEEAVCQVVEAVQMAKAGLL 476 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVG 542 E+KP+ S LF GPTGVGKTEV L+ LGI L RFDMSEY E+HTV++LIG+P GY+G Sbjct: 477 DENKPLASLLFVGPTGVGKTEVAKVLASELGIALQRFDMSEYTEKHTVAKLIGSPAGYIG 536 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 ++ GGLLTDA+ K P+ VLLLDEIEKAHPD+FNILLQVMD LTDN GRKAD R+V+L+ Sbjct: 537 YEDGGLLTDAIRKTPNCVLLLDEIEKAHPDIFNILLQVMDYAVLTDNKGRKADCRHVILI 596 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAM-EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 MT+NAG + + SIG Q + +AM +++KK F PEF NRL + F + + + Sbjct: 597 MTSNAGAQFAHQASIGFSGQITAGEAMLKQVKKTFKPEFINRLSATVVFHDMDYGMASLI 656 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 ++K + EL+ +L + V +E+S EA L + G+ + GAR M RVI LK L E+L Sbjct: 657 LNKKLNELKNKLSARHVGMELSPEAYKHLLKLGFTKEYGAREMDRVITSQLKPLLMREIL 716 Query: 722 FGSLVDGGQVTVALDKEKNELTYGFQ 747 FG+L GG+V V + L + Sbjct: 717 FGTLKTGGKVRVTAGNGELSLQVLKE 742 >UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMJ0_FIBSS Length = 838 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 311/809 (38%), Positives = 468/809 (57%), Gaps = 85/809 (10%) Query: 18 REHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEEE 75 R + +TVEHLL L+ S A E L+A V+L L + ++ + ++ + Sbjct: 24 RNLGSDCVTVEHLLFGLVREDSGVASETLKALKVNLTELSETIQRALSTNGGLMTVGGDS 83 Query: 76 RD--TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLD 133 T + VL A + G + ++++AI + +S AA L + V+ + Sbjct: 84 HGGLLTFTGQCKAVLYNAAKIAKEEGVQFIGPEHLMLAILQQTDSPAAATLSTYNVTFEN 143 Query: 134 VVNFISHGTRK-----------DEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 + R+ ++ + ++ + + +E+F +L +AR Sbjct: 144 YQEMLMQIKRQADGQPMDEGQPEDEPRERYTQTRQANPQSRSKTPILEHFGRDLTAMARA 203 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 G +DP+IGRE E+ER IQ+LCRR+KNNP L+GE GVGKTAI EGLA +IVQ +P+++A+ Sbjct: 204 GKLDPIIGREAEIERLIQILCRRKKNNPALIGEPGVGKTAIIEGLALKIVQRKIPDLLAN 263 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN-SILFIDEIHTIIGAGAASGGQV 301 + +LD+ +++AGTKYRG FE+R K L+ +L++ N ILFIDE+HTI+GAG + G + Sbjct: 264 KRVVTLDVAAMVAGTKYRGQFEERVKGLIMELQRVGNSVILFIDELHTIVGAGGSE-GSL 322 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DA+N+ KP L+ G+++ IG+TT+ E+ EKD AL RRFQ I + P++E+++QI+ GL Sbjct: 323 DASNIFKPALARGELQCIGATTFDEYRKYIEKDPALERRFQTIIVNPPTVEDSIQILEGL 382 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT- 420 +PKYE HH+V YT AVRAAVEL +YI++R LPDKAIDV+DEAGAR RL + + Sbjct: 383 RPKYEQHHNVHYTPDAVRAAVELGERYISERFLPDKAIDVLDEAGARVRLNSIKIPQDLQ 442 Query: 421 -------------------------VNVADIESVVARIARIPEKSVSQSDR--------- 446 + E + +K + + Sbjct: 443 NMEDELGVCLQKKEEAVANQDYTSAAQLRAREEELQNSIAERKKQLQSEESETPVVDDNV 502 Query: 447 ---------------------DTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 L +LGD +K V GQD+A++A+ ++I+ +RAG+ + Sbjct: 503 IRDVISKMTGIPVRRLGGEEAQKLIHLGDEIKQRVIGQDQAVDAIVKSIRRSRAGIRNNK 562 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+GSFLF GPTGVGKTE+ L K L L+R DMSEYME+H+VSRLIGAPPGYVG Sbjct: 563 RPMGSFLFLGPTGVGKTELAKVLCKELFGSEDSLVRIDMSEYMEKHSVSRLIGAPPGYVG 622 Query: 543 FDQ-GGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 F+ GG L++ V KHP++V+LLDEIEKAHPD++N+LLQ++D+G LTD+ GRK +F+N ++ Sbjct: 623 FEDGGGQLSEKVRKHPYSVVLLDEIEKAHPDIYNLLLQILDDGILTDSYGRKINFKNTII 682 Query: 602 VMTTNAGVRETERKS-IGLIHQDNSTD-------AMEEIKKIFTPEFRNRLDNIIWFDHL 653 +MT+NAG RE S +G + D EE+K++F+PEF NR+D I F L Sbjct: 683 IMTSNAGAREVRHSSGMGFTKMGETDDYERMETAIREEVKRVFSPEFLNRVDEQIVFRAL 742 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 S + VVD + LQ L +G+ LE+SQEA+ ++ YD ++GARP+ R IQ+ ++ Sbjct: 743 SKKDLVSVVDIQMGFLQKNLSDRGILLEMSQEAKEFVVNHNYDASLGARPIRRSIQNLVE 802 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNEL 742 +A LL G++ D + V ++ K Sbjct: 803 DEIAEGLLLGTMTDFSTIYVGVENGKLSF 831 >UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C6_9ACTN Length = 875 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 286/842 (33%), Positives = 444/842 (52%), Gaps = 94/842 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + L +A AR ++ EH+LLA L + + L + + + +E Sbjct: 5 FTAQTRNILLLAQEEARSVGKLYVGTEHILLAYLKDEENSVTQVLSSFDITYAQAYEIVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + + +R L +A + +T ++ +A+ + ES Sbjct: 65 SLASTGAADAASGH----VPFSALTKRALAQAFTLASAHATGLITTKDLFIAMLALPESH 120 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPN----------------SEEQA 163 A +L + VS + I +E + D S + S+ ++ Sbjct: 121 ACLVLTRIGVSFSSLSTAIDALDDSEEYSAPEDAESTQDEQDDDLTEVAYGIPSASQARS 180 Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 + ++ + NL +A+ +DP+IGR+KE+ R Q+L RR+KNNPL++G+ GVGKTA+ Sbjct: 181 KMGKLLKRYGKNLVAVAQQEKLDPVIGRDKEITRIAQILARRQKNNPLILGDPGVGKTAV 240 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILF 283 EGLA I + P +AD I++LDI S+LAG KYRG+FE R K ++ ++ + TN ILF Sbjct: 241 VEGLAQLIATHNAPVTLADKQIWTLDISSMLAGAKYRGEFEDRLKRVINEVRKATNIILF 300 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDEIHTIIGAG+A G +DAA+++KP LS +I+VIG+TT +E+ EKD AL RRFQ Sbjct: 301 IDEIHTIIGAGSAE-GSIDAASILKPPLSRSEIQVIGATTAEEYRKHIEKDPALERRFQP 359 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 +++ EP++ +T+QI+ GL +YEA H V YT A+ A L+ +YI DR LPDKAIDVID Sbjct: 360 VEVCEPTVSQTLQILKGLSARYEAFHHVHYTQNALVEATRLSHRYIQDRFLPDKAIDVID 419 Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF-- 461 EAGAR ++ + + V + + + + D ++++ L+ + Sbjct: 420 EAGARKSVVKRHEPHEIVTMRTALAKLKEKKERLLAHENYEDAASVRDDEKSLEQKIVHA 479 Query: 462 -----------GQDKAIEALTE-------------------------------------- 472 Q+ + + Sbjct: 480 VKDWEKSRASEQQNVDVNDIARVISDISGVPVTSLTEKESEKLLRCEQELHKRLIGQKEA 539 Query: 473 ------AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSE 523 AI+ +R+ L +P GSF+F GP+GVGKTE+ L++ L L+ FDMSE Sbjct: 540 VAKVAHAIRRSRSPLKDPARPGGSFIFLGPSGVGKTELAKSLAEFLFGTQEALISFDMSE 599 Query: 524 YMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDN 583 +ME+H VS+L+GAPPGYVG+DQGG LT AV + P++V+L DEIEKAHPDVFNILLQ+++ Sbjct: 600 FMEKHEVSKLVGAPPGYVGYDQGGELTKAVRRRPYSVVLFDEIEKAHPDVFNILLQILEE 659 Query: 584 GTLTDNNGRKADFRNVVLVMTTNAGVRET---------ERKSIGLIHQDNSTDAMEEIKK 634 G LTD GR DF N V++MT+N G RE + GL +++ + E+K+ Sbjct: 660 GRLTDGQGRVVDFSNTVIIMTSNIGAREIAHTSPMGFSSQGDDGLSYKEIKSRVKSELKR 719 Query: 635 IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKG 694 F PEF NR+D I+ F LS + + ++V+ + +L +L Q+ + L +S A + +A+KG Sbjct: 720 SFRPEFLNRVDEIVVFTTLSKEELRKIVELMVSQLAYRLAQEHIMLTLSDAACDLIAQKG 779 Query: 695 YDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKA 754 D GARP+ R +Q ++ LA +LL G V +D +++EL + + A K Sbjct: 780 TDPIYGARPLRRTLQRLVEDRLAEDLLEHKWSAGD--EVYVDAQEHELVFKKREADLQKL 837 Query: 755 EA 756 +A Sbjct: 838 QA 839 Score = 43.6 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 28/73 (38%) Query: 79 QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFI 138 Q T + +L A +S G+ V ++L+A ++E+ +L +++ + Sbjct: 4 QFTAQTRNILLLAQEEARSVGKLYVGTEHILLAYLKDEENSVTQVLSSFDITYAQAYEIV 63 Query: 139 SHGTRKDEPTQSS 151 +S Sbjct: 64 ESLASTGAADAAS 76 >UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=Q025Q2_SOLUE Length = 823 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 288/806 (35%), Positives = 438/806 (54%), Gaps = 86/806 (10%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQELEAF 61 ++ + A A + ++ EHLLL LL A + ++R+++E Sbjct: 6 TEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKALANRFLRSHAAVESIRKQIEGH 65 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 T + D + +RVL + + ++L+ + E++ AA Sbjct: 66 ----TTIREKVSTSVDLPLSHECKRVLAYGAEEAERLSHKHIGTEHLLLGLLREEKCFAA 121 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 +L + + + ++ + + + F+ +L Q A Sbjct: 122 EILHERGLRLSTIREELARSQSEKVASARPKES------------SLLAEFSRDLTQAAM 169 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 +DPLIGR+ ELER +Q+LCRR KNNP+L+GE GVGKTAI EGLA RI +GDVP +A Sbjct: 170 DNTLDPLIGRDYELERVVQILCRRTKNNPVLIGEPGVGKTAIVEGLAQRIAEGDVPSFLA 229 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 D I +LD+ ++AGTKYRG FE+R K ++K+L ++ N+I+FIDE+HT++GAG+A G + Sbjct: 230 DKRILALDLSLIVAGTKYRGQFEERLKTIMKELMENQNAIIFIDELHTLVGAGSAE-GSL 288 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DAAN++KP LS G+I+ IG+TT EF EKDR+L RRFQ + + P+ + ++I+ G+ Sbjct: 289 DAANILKPALSRGEIQCIGATTPAEFRKSIEKDRSLERRFQAVKVPPPNESDAIKILFGI 348 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTV 421 K +YE H V YT A+ AAV + +YI DR+LPDKAID+IDEAGAR +L + Sbjct: 349 KDRYEKFHAVAYTDDAIEAAVYTSSRYIPDRYLPDKAIDLIDEAGARVKLRQTTLPADLA 408 Query: 422 NV--------ADIESVVARIARIPEKSVSQSDRD-------------------------- 447 ++ +E+ +A + S +R Sbjct: 409 DIQKRIKFIVHRMENAIANHEFEKARFYSDEERKERENMRLLREKYNLDDSSTGCVTKDD 468 Query: 448 ----------------------TLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 L + + L V Q+KAI AL AI+ +RAGL + Sbjct: 469 IEDVVARWTGVPMTSIKEEEIAKLLRIEEELHKRVISQEKAISALARAIRRSRAGLKASN 528 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P GSFLF GPTGVGKTEV L+ L L+RFDMSEYME+H+VS+LIG+PPGYVG Sbjct: 529 RPAGSFLFLGPTGVGKTEVARALAGFLFGSEKSLVRFDMSEYMEKHSVSKLIGSPPGYVG 588 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 +++GG LT+ V ++P++++LLDEIEKAHPD++NILLQV ++G LTD G + DF+N +++ Sbjct: 589 YEEGGQLTERVKRNPYSIILLDEIEKAHPDIYNILLQVFEDGQLTDGLGNQVDFKNTIII 648 Query: 603 MTTNAGVRETERK-SIGL-------IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 MT+N G R E++ ++G E+KK F PEF NRLD +I F L+ Sbjct: 649 MTSNLGARFLEKRGNLGFSIPAGEAGSTKVEDMVRSEVKKAFNPEFLNRLDEVILFMSLT 708 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEK-GYDRAMGARPMARVIQDNLK 713 + Q+++ + ++ V L K V + ++ +A ++ EK DR+ GARP+ R +Q ++ Sbjct: 709 DPDLIQIMELLVQQVNVNLVAKQVKIHLAPDAAKYILEKTCADRSYGARPLRRALQKYIE 768 Query: 714 KPLANELLFGSLVDGGQVTVALDKEK 739 PL+ L+ G+L + V L Sbjct: 769 DPLSEALIQGTLPRPADLEVYLGDTG 794 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 2/88 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L+ E + L A H+ + EHLLL LL A E L + L +R+EL Sbjct: 80 LSHECKRVLAYGAEEAERLSHKHIGTEHLLLGLLREEKCFAAEILHERGLRLSTIREELA 139 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRV 87 + E + + + Sbjct: 140 RSQSEKVASARPKESSLLAEFSRDLTQA 167 >UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic n=354 Tax=cellular organisms RepID=CLPC_PEA Length = 922 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 271/835 (32%), Positives = 439/835 (52%), Gaps = 90/835 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++ + +A AR H F+ E +LL L+ + A + L++ ++L R E+E Sbjct: 95 FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVE 154 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + + T +RVL+ + + G N + ++L+ + E E Sbjct: 155 KIIGRG-----SGFVAVEIPFTPRAKRVLELSQEEARQLGHNYIGSEHLLLGLLREGEGV 209 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L ++ + + + + + S +E + TNL +L Sbjct: 210 AARVLENLGADPTNIRTQVIRMVGESADSVT----ATVGSGSSNNKTPTLEEYGTNLTKL 265 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP++GR+ ++ER Q+L RR KNNP L+GE GVGKTAIAEGLA RI GDVPE Sbjct: 266 AEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPET 325 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + +LD+G L+AGTKYRG+FE+R K L+++++Q + ILFIDE+HT+IGAGAA G Sbjct: 326 IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGA 385 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G+++ IG+TT E+ EKD L RRFQ + + EP+++ET+QI+ Sbjct: 386 -IDAANILKPALARGELQCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETIQILK 444 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YE HH +RYT +A+ AA +L+ +YI+DR LPDKAID++DEAG+R RL ++ Sbjct: 445 GLRERYEIHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLQHAQLPEE 504 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA------ 473 + + + ++ L++ LK + + + +++A Sbjct: 505 AKELDKEVRKIVKEKEEYVRNQDFEKAGELRDKEMDLKAQISALIEKGKEMSKAETETAD 564 Query: 474 -------------------IKMARAGLGHEHKPVGSFLFAGPTGVGK------------- 501 I + + + + +G+ Sbjct: 565 EGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRR 624 Query: 502 -------------------------TEVTVQLSKALGI---ELLRFDMSEYMERHTVSRL 533 +E+ L+ ++R DMSE+MERHTVS+L Sbjct: 625 ARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 684 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 IG+PPGYVG+ +GG LT+AV + P+ V+L DEIEKAHPDVFN++LQ++++G LTD+ GR Sbjct: 685 IGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRT 744 Query: 594 ADFRNVVLVMTTNAGVRETER--KSIGLIHQDNSTD---------AMEEIKKIFTPEFRN 642 DF+N +L+MT+N G E+ + IG + D EE+K+ F PEF N Sbjct: 745 VDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLN 804 Query: 643 RLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 RLD +I F L+ + ++ D + E+ +L K + L+V++ R+ + ++GY+ + GAR Sbjct: 805 RLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGAR 864 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS-AQKHKAEA 756 P+ R I L+ +A ++L + +G V V +D + + S + EA Sbjct: 865 PLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGKVIVLNGSSGTPESLPEA 919 >UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFH5_9HELI Length = 763 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 323/775 (41%), Positives = 479/775 (61%), Gaps = 41/775 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 LN L + RH+ +T+EH +L NP RE +EA + L L A+ Sbjct: 4 LNSTLSNIFQKTLHFVEDMRHDVLTIEHAFYVMLENPLGRELVEATGANTKILMDSLGAY 63 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 +E+ P A +E T +F RV + H +++ + V + VA+ E++ A Sbjct: 64 LEKHIPKGRALKELEAPHQTPAFMRVFDHMISHAKNAQKASVGIGDFFVALMQEEDCYCA 123 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 LL+ + DV+ + D + E+ + ++E + NLNQLA Sbjct: 124 RLLKAQGIQIEDVMRIVV------------DFDEHVSREKTKDSQSQLEKYAKNLNQLAI 171 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G IDPLIGR+ E+ + QVLCRR+KNNP+L+GE+GVGK+AI EGLA RIV+ VP + Sbjct: 172 EGKIDPLIGRDLEINQIAQVLCRRKKNNPMLIGEAGVGKSAIVEGLALRIVERSVPAKLL 231 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 + IY++D+ S++AGTKYRG+FE R K +L ++E+D N I+F DEIH I+GAG ++ G + Sbjct: 232 NNVIYAVDVSSVVAGTKYRGEFETRIKKILAEVEKDKNIIIFFDEIHMIVGAGQSNSGGM 291 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 D +NL+KP+L+SG++R IG+TT ++ N F+KD+ALARRF +I + EPS EE + I+ + Sbjct: 292 DFSNLLKPMLASGRLRCIGATTSHDYKNSFDKDKALARRFTQIKVEEPSEEECLLILEKI 351 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP-------- 413 P YE H+V Y +A++A V L+ KYI +RHLPDKAID++DEAGA+A+L Sbjct: 352 APLYEKFHNVTYENEAIKACVSLSSKYITERHLPDKAIDLMDEAGAKAQLNEFLCNDERK 411 Query: 414 ----------------VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 + K + IES++A I IP+ +++ + LKNL +LK Sbjct: 412 SETLEKLTKTKKTKKDSKTQHKIITKEHIESLMASITNIPKSTINADESMLLKNLESKLK 471 Query: 458 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELL 517 +F QDKAIE + E IK+ +AGLG H+P+ SFLF GP+GVGKTE++ +L+K LGI+ Sbjct: 472 KRIFSQDKAIEKIVEKIKINKAGLGELHRPIASFLFTGPSGVGKTELSKELAKILGIKFE 531 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 R DMSEY E H++S+LIG+P GYVG+++GGLL + + +PH VLLLDEIEKAH DV+NIL Sbjct: 532 RIDMSEYAESHSISKLIGSPAGYVGYEEGGLLINKIRINPHCVLLLDEIEKAHSDVYNIL 591 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFT 637 LQ+MD+ TLTDN KADF+NV+L+MT+NAG +E S+G + + IK F+ Sbjct: 592 LQIMDSATLTDNQNNKADFKNVILIMTSNAGSKE--GNSVGFLDT-SEHRVGMAIKDTFS 648 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDR 697 PEFR+RLD II F L + + ++ K+I +L L +K ++L +S +A ++A++ D+ Sbjct: 649 PEFRSRLDAIIPFMPLGVNELQKIAQKYITDLNETLKEKHITLNLSTKAAQFIAQQSIDK 708 Query: 698 AMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKH 752 A+GAR + + I +K PL+N +LFG L GG + + + N L + Q ++ Sbjct: 709 ALGAREIKKTIDSAIKLPLSNAMLFGELRKGGVAHINV--KNNTLVFDIQKQRQE 761 >UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/mecB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8V8_COPPD Length = 805 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 286/820 (34%), Positives = 442/820 (53%), Gaps = 93/820 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELEA 60 ++E +L A AR F+ EHL+LA+L+ + A +++ D +R +E Sbjct: 5 FSEEARKALKDAQEEARRLNSSFVGREHLVLAMLNEDTRAYSIIDSLGADADNIRSSIED 64 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +P + + + + +R+L A + + V ++L+AI E S+ Sbjct: 65 I------PMPMASSLQYPELSSEARRLLDIASEEARKLAHSYVGTEHLLLAILKEP-SRV 117 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 + +L ++ V DV + G Q E+ ++ F+ +L LA Sbjct: 118 SSILNENGVFYDDVRKKVIEM------------GEQEPEEKGKTKTPVLDKFSKDLVSLA 165 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 G +DP+IGRE EL R I++L RR KNNP+L+GE GVGKTAI EGLA RI G VP + Sbjct: 166 EKGKLDPVIGRETELNRIIEILSRRIKNNPILLGEPGVGKTAIVEGLAERIASGKVPYSL 225 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGG 299 + LDI S++AGTKYRG+FE+R K +L ++++ + ILFIDEIHT+IGAGAA G Sbjct: 226 KKKRVVQLDISSIVAGTKYRGEFEERMKKILDEVKRTNGQVILFIDEIHTVIGAGAAEGA 285 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAA+++KP L+ G+I+VIG+TTY ++ E+D A RRFQ + + EPS+EET QI+ Sbjct: 286 -IDAASILKPSLARGEIKVIGATTYDDYRKYIERDPAFERRFQPVQVEEPSLEETKQILI 344 Query: 360 GLKPKYEAHHDVR---------------------YTAKAVRAAVE--------------- 383 GL+P YE H+V+ KA+ A E Sbjct: 345 GLRPIYEKFHNVKIADDAIEAAAILTKKYVKQRFLPDKAIDALDETCAKVRLANEVLPSN 404 Query: 384 -------------------LAVKYINDRHLPDKAIDVIDEAGARARL----MPVSKRKKT 420 + ++ L DK + +E + + + + T Sbjct: 405 LRALLDEIENVRLQKQLAIDSQQFEEAAALRDKEKALKEEYSRMEEIWLYERSMDENQPT 464 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V+ D+ ++ IP + D+ L + D L + GQ++A+ A+ +AI+ +R G Sbjct: 465 VSFDDVAYTISSWTGIPVAKLRLDDKKKLLEIEDYLHRRIVGQNEAVTAVAKAIRRSRTG 524 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAP 537 L + +P+G FLF GPTGVGKTE+ L++ + E L+R DMSEYME+ VSRL+GAP Sbjct: 525 LQDDRRPIGVFLFLGPTGVGKTELARALAEFMFGEEEALIRIDMSEYMEKFNVSRLVGAP 584 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GG LT+AV + PH+++LLDEIEKAHPDVF+ILLQ+ ++G LTD GR DFR Sbjct: 585 PGYVGYEEGGQLTEAVRRKPHSIVLLDEIEKAHPDVFDILLQIFEDGRLTDGQGRVVDFR 644 Query: 598 NVVLVMTTNAGVRETERKS------IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 N +++MT+N G R+ + + ++ M+ +KK F PEF NR+D I+ F Sbjct: 645 NTIIIMTSNLGSRDISAGTTIGFLKDQVKFENMENLVMDAVKKFFKPEFLNRIDEIVVFH 704 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 HL+ D + Q+V + EL QL + +++++S + + +GY+ GARP+ R IQ Sbjct: 705 HLTNDDLRQIVGIMMDELNKQLRSQNLTVKISDRMLDQIITEGYEPRFGARPLRRAIQRL 764 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 +K PLA +L + G T+ +D E+T ++ Sbjct: 765 VKDPLAEYMLKHENISG---TLFMDFVDGEITINKVPDEE 801 >UniRef50_C9PUC6 ATP-dependent Clp protease subunit n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PUC6_9BACT Length = 753 Score = 639 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 314/754 (41%), Positives = 457/754 (60%), Gaps = 19/754 (2%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 + + + LN A +R+EF+T EHLL+AL + + AL+A D +AL +L+ + Sbjct: 7 SHDTDQVLNGALNYCMLYRNEFVTPEHLLMALTNQDNFSIALDASGGDTLALMAQLDGVV 66 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 + +PA ++ VL A + + ++++ + + + S AAY Sbjct: 67 GK-METMPADWH-HVPDNSVLLSEVLSNAQKLAMMADVETLQVPHLVMGLINLENSDAAY 124 Query: 123 LLRKH-EVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 LL K + + V + D + E + E + T +N + Sbjct: 125 LLNKQLGENATNFVAELVELYTND-----ARMSFFGGEEGEEEENEPWRSLVTCVNDTYK 179 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 +PLIGRE+EL+R IQVLCR+ KNNPL VGE GVGKT++ GLA I +GDVP+ + Sbjct: 180 NH--NPLIGREEELQRTIQVLCRKEKNNPLHVGEPGVGKTSLVYGLAAMIERGDVPQRLQ 237 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 C +Y +D+G++LAGT+YRGD EKR K ++ L ++ N+IL+IDEIH ++GAG + G + Sbjct: 238 GCRVYQMDMGTMLAGTQYRGDLEKRIKQVMDGLLEEGNTILYIDEIHNLVGAGRSGEGSM 297 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DA+N++KP L G +R IGSTTY E++ F K + RRFQ+ID+ EP+ EE ++I+NGL Sbjct: 298 DASNMLKPYLEGGDVRFIGSTTYAEYNRYFAKSAGIVRRFQQIDVPEPTPEEAIKILNGL 357 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTV 421 K +YE H+VRY+ + AV + KY+NDRHLPDKAID+IDEAGA ++ P+ +++ V Sbjct: 358 KGQYEKFHNVRYSPGVIEFAVRASAKYVNDRHLPDKAIDLIDEAGAYRQMHPLPTKRQKV 417 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 + A + V+ ++ ++ ++ + L L R+K ++GQ++A+E +T+AI+ A+AGL Sbjct: 418 DKALVSDVLTKVCKVQAVALKDDGNEALLTLEKRMKEQIYGQNQAVELVTQAIQTAKAGL 477 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYV 541 E KP+ + LF GPTGVGKTEV L+ LGIEL+RFDMSEY E+H V++LIG+P GYV Sbjct: 478 TEEGKPLSAMLFVGPTGVGKTEVARVLAHELGIELVRFDMSEYTEKHAVAKLIGSPAGYV 537 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G++ GGLLTDA+ K P+ VLLLDEIEKAH D++NILLQVMD LTDN G+KADFRNVVL Sbjct: 538 GYEDGGLLTDAIRKIPNCVLLLDEIEKAHADIYNILLQVMDYARLTDNKGQKADFRNVVL 597 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAME-EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 +MT+NAG + + ++G + +AM ++KK F PEF NRL + F + + H Sbjct: 598 IMTSNAGAQFASQANVGFASNVSRGEAMMVQVKKTFKPEFINRLSATVVFRDMDEAMAHL 657 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 ++ K I LQ QL + V L + A N+L G+ GAR M RVI LK L E+ Sbjct: 658 ILKKKINALQQQLVARNVELTLDAAAENYLLRLGFTPLYGAREMDRVIAAQLKPLLTREM 717 Query: 721 LFGSLVDGGQVTV--------ALDKEKNELTYGF 746 LFG L GG+ V D +L Sbjct: 718 LFGKLKKGGKAIVKTQGHEPPTPDDTNVQLVLDV 751 >UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAZ3_9FIRM Length = 765 Score = 637 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 278/753 (36%), Positives = 430/753 (57%), Gaps = 27/753 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN-PSAREALEACSVDLVALRQELEA 60 ++ L A A + E HLLLA+L +A + L ++ +R++L Sbjct: 15 FSRPAARLLQQAVQLAGDLGCEQADTSHLLLAMLQQQGAAAQFLTRKNITEPEVRRQLAQ 74 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 L +R + A+ Q++ + ++L A+ + A Sbjct: 75 QRSGPAQRLDRQS------MAPDLRRTMDYALIGAQNAHVSRAEPEHLLCAMLEDDGCAA 128 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 LL + +S + V + + + +A + + +L + A Sbjct: 129 GLLLAEMGLSLTEAVRECRQLSGQFVLPAQPRVSASIPRGSRAS-----DKYCRDLTRRA 183 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 G +DP+ RE EL+R +++LCRR+KN+P L+GE GVGKTA+AEGLA RI G VP + Sbjct: 184 AEGELDPVFCREAELDRMVEILCRRQKNDPCLIGEPGVGKTALAEGLALRIAAGQVPRAL 243 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + +LD+ SL+AGTKYRGDFE+R K LL++L +D +ILFIDE HTI+GAGAA G Sbjct: 244 QGRRLLALDMASLVAGTKYRGDFEERLKNLLEELVRDGTAILFIDEFHTIVGAGAAEGA- 302 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DAA+++KP+L+ G++++IG+TT QEF +KD AL RRF ++ + EP+ + V+I+NG Sbjct: 303 IDAASILKPVLARGELQLIGATTNQEFRTHIQKDAALERRFGRVQVEEPTPAQAVEILNG 362 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL--MPVSKRK 418 L P+YE +H+VR + ++AAVEL+V+Y+ R LPDKAID++DEA A AR+ + + Sbjct: 363 LAPRYERYHNVRLPPQTLQAAVELSVRYLPGRCLPDKAIDLVDEACAAARILAEKEQRTQ 422 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 + DI VVA + +P + V + +R+ L L RL + GQ +A+ A+ AI+ +R Sbjct: 423 PVLTPEDIARVVAAASGVPAQRVGEQERERLDKLESRLNAEIVGQQRAVAAVAGAIRRSR 482 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIG 535 GLG +P+G+ LF GPTGVGKT + L+ + LL+FDMSEY E+HT +RL+G Sbjct: 483 TGLGEPGRPIGAMLFLGPTGVGKTALARALAVSWFGSEKALLKFDMSEYQEQHTAARLLG 542 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGY+G D+GG LT+AV + P++V+L DEIEKAHPD+ NILLQ++++G LTD GRKAD Sbjct: 543 APPGYLGHDEGGQLTEAVRRRPYSVVLFDEIEKAHPDIQNILLQILEDGQLTDAMGRKAD 602 Query: 596 FRNVVLVMTTNAGVRET--ERKSIGLIH------QDNSTDAMEEIKKIFTPEFRNRLDNI 647 FRN ++++T+N G R + +G + S A+EE KK F PE RLD + Sbjct: 603 FRNTIVLLTSNLGARFLAGQNAPLGFAAGAEAVFEKQSAQAVEEAKKWFRPELLGRLDEV 662 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 I F L+ + + + +K + +L+ + + G L + + A GAR + R Sbjct: 663 IVFRPLAEENLCAIAEKMLCQLEQRAARSGYRLRHTPQVGAA-LAARAQSAYGARELRRQ 721 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 + +++ LAN + G+ G T + + Sbjct: 722 VDRAVEQALANRIAAGTACVGQHWTADCAADGS 754 >UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=5 Tax=Lactococcus lactis RepID=Q030Z1_LACLS Length = 816 Score = 637 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 272/810 (33%), Positives = 447/810 (55%), Gaps = 76/810 (9%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELEA 60 L+ A A ++++ + HLL A+ S A L +VD L +LE Sbjct: 9 TPTLDRIFEKAAEDAHQYQYGTIESAHLLAAMATTSGSIAYSILAGMNVDSSDLLIDLED 68 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + + + V+ A F + V ++L A+ ++ Sbjct: 69 LSSHVKVKRS------ELRFSPRAEEVVTVASFLAVHNNAEAVGTEHLLYALLQVEDGFG 122 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE-----EQAGGEERMENFTTN 175 LL+ +++ + + I T P + + +++ +++ Sbjct: 123 IQLLKLQKINIVSLRKEIEKRTGLKVPENKKAVTPMSKRKMAKGVAENSSTPTLDSVSSD 182 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L + AR G +DP+IGRE E++R I +L RR KNNP+LVGE GVGK+AI EGLA RIV G Sbjct: 183 LTEAARSGKLDPMIGREAEVDRLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVNGQ 242 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VP + + I +L++ +++AGTK+RG+FE R A+++++ D + I+FIDE+HTIIGAG Sbjct: 243 VPIGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVSADPDVIIFIDELHTIIGAGG 302 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 DAAN++KP L+ G +++G+TTY E+ EKD AL RR +I++ EPS +E + Sbjct: 303 GMDSVNDAANILKPALARGDFQMVGATTYHEYQKYIEKDEALERRLARINVDEPSPDEAI 362 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 I+ GL+ K+E +H V++T +A+++AV L+V+Y+ R LPDKAID++DEA A ++ + Sbjct: 363 AILQGLREKFEDYHQVKFTDQAIKSAVTLSVRYMTSRKLPDKAIDLLDEAAAAVKISVKN 422 Query: 416 KRKKTVNVAD-------------------------------------------------- 425 + K + + Sbjct: 423 QETKRLELEKDLVKAQEELAEAVIKLDVKASRIKEKAVEKISDKIYKFSIKEEKRQEVTD 482 Query: 426 --IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 + +V + + +P +++S+ D L NL L V GQ++AI A++ AI+ AR+G+ Sbjct: 483 QAVIAVASTLTGVPITQMTKSESDRLINLEKELHKRVVGQEEAISAVSRAIRRARSGVAD 542 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGY 540 +P+GSF+F GPTGVGKTE+ L+ ++ ++R DMSE+ME+H+ SRLIGAPPGY Sbjct: 543 SRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEKHSTSRLIGAPPGY 602 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+D+GG LT+ V P++V+LLDE+EKAHPDVFNI+LQ++D+G +TD GRK DFRN + Sbjct: 603 VGYDEGGQLTERVRNKPYSVVLLDEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRNTI 662 Query: 601 LVMTTNAGVRET-ERKSIGLIHQDNSTD-------AMEEIKKIFTPEFRNRLDNIIWFDH 652 ++MT+N G + K++G ++ + D +EE+K+ + PEF NR+D I F Sbjct: 663 IIMTSNLGATALRDDKTVGFGAKNITADYSAMQSRILEELKRHYRPEFLNRIDENIVFHS 722 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 L + I Q+V L +L ++ + ++++ A +AE G+D GARP+ + +Q + Sbjct: 723 LESQEIEQIVKIMSKSLIKRLAEQDIHVKLTPSAIKLIAEVGFDPEYGARPLRKALQKEV 782 Query: 713 KKPLANELLFGSLVDGGQVTVALDKEKNEL 742 + L+ +LL G + G +++ +K ++ Sbjct: 783 EDLLSEQLLSGEIKAGNHISIGASNKKIKI 812 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 25/60 (41%) Query: 76 RDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVV 135 + + T + R+ ++A + A++L A+ + S A +L V D++ Sbjct: 4 ENVKYTPTLDRIFEKAAEDAHQYQYGTIESAHLLAAMATTSGSIAYSILAGMNVDSSDLL 63 >UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Treponema pallidum RepID=B2S440_TREPS Length = 809 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 349/791 (44%), Positives = 500/791 (63%), Gaps = 51/791 (6%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +++ +++ L+ AF AR+ RHE++T EH+L + L++P+A E + CS D+ + L Sbjct: 4 IISASVQIILDQAFDLARKRRHEYITAEHVLFSALAHPAALEIINLCSADIALIHSNLSE 63 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F++ PV + +L FQ +L+RAV + +++ ++ + ++LV++ + + A Sbjct: 64 FLKTQVPV----DLSHTPSQSLGFQHLLKRAVLYCEANKKSALEVGDLLVSLLQAETNYA 119 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG--------------- 165 +Y +R +S ++ I+ ++ GS Sbjct: 120 SYYMRMSGMSTARLIEVIARVNGIRHGDKNVSMGSNAQERYSESDDVGESAGHGPPLDGT 179 Query: 166 ---------------------------EERMENFTTNLNQLARVGGIDPLIGREKELERA 198 +E +T NL + AR G + PLIGR +E+ER Sbjct: 180 EGDGNTADVHVHYEHCAHKRTDADTHRYTVLEKYTVNLTERARRGELAPLIGRTQEIERT 239 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 IQ+LCRR+KNNP+ VGE+GVGKTAI EGLA RIV+ DVPE + I+SLD+ SLLAGTK Sbjct: 240 IQILCRRQKNNPVHVGEAGVGKTAITEGLAQRIVRCDVPEALEGVEIFSLDMTSLLAGTK 299 Query: 259 YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRV 318 +RGDFE+R K L ++LE+ T +ILFIDEIHT++G G+ G +DA+NL+KPLLSSGKIR Sbjct: 300 FRGDFEERLKRLAEELEKKTQAILFIDEIHTVVGTGSGGSGGLDASNLLKPLLSSGKIRC 359 Query: 319 IGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAV 378 IGSTTY+E++ F KD+ALARRFQKIDI EPS EET++I+ G++ YE H V Y+ +A+ Sbjct: 360 IGSTTYEEYTKHFRKDQALARRFQKIDIEEPSEEETLRILEGIRTLYEDFHAVHYSDEAL 419 Query: 379 RAAVELAVKYINDRHLPDKAIDVIDEAGARARL----MPVSKRKKTVNVADIESVVARIA 434 AAV L+V+YI RHLPDKAID+IDEAGA A+L + +DI+ +VA+IA Sbjct: 420 AAAVRLSVQYIQGRHLPDKAIDIIDEAGACAKLSRGKHGTEGVCSVIGESDIDEIVAKIA 479 Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 +IP++ VS S+ + L+N + +FGQ +AI+ +T +K AR GL +HKP+ + LF Sbjct: 480 KIPKQRVSASEIEKLRNFERSISEKIFGQGEAIDLVTRTLKRARVGLRVKHKPIANLLFV 539 Query: 495 GPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 G TGVGKTE+ L++ LGI L RFDMSEY E+HTVSRLIG+PPGYVGF++GGLLTDAV Sbjct: 540 GATGVGKTELARTLAQELGIVLHRFDMSEYQEKHTVSRLIGSPPGYVGFEEGGLLTDAVR 599 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 K PHAVLLLDEIEKAHPD+FN+LLQVMD TLTDN GRKADFRNV+L+MT+NAG R Sbjct: 600 KQPHAVLLLDEIEKAHPDIFNVLLQVMDYATLTDNQGRKADFRNVILIMTSNAGARNMGV 659 Query: 615 KSIGLIHQDNSTDA-MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL 673 IG T E +++IF+PEFRNRLD +I FD LS + + ++ K + + QL Sbjct: 660 SLIGFHKGQVGTAVIDEAVERIFSPEFRNRLDAVIRFDALSLETMERIARKELALVCEQL 719 Query: 674 DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 +K + +++ +A LAE+ + GAR +AR+++ + LA+ +LFG + +G + Sbjct: 720 QKKHIRFDITDDALALLAERSHSGGSGARNVARLVEQEVANVLADLMLFGGVAEGDALRC 779 Query: 734 ALDKEKNELTY 744 + + + Sbjct: 780 TVKDRHAQCNF 790 >UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LKK9_9BACT Length = 866 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 286/836 (34%), Positives = 451/836 (53%), Gaps = 92/836 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 L+ L L + A + + L L LL N ++R + L + V + ALR +E Sbjct: 29 LSAALTNILTYSKTEAIRFKQPIVDELCLFLGLLHNGNSRIADLLRSTGVSIEALRDAIE 88 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + L A + + +R+L+ +V + +G ++L+AI +++++ Sbjct: 89 HQFTVSVETLDAV--SDNIILNETCRRILRLSVLEARRAGSKMADEDHLLLAILRDKDNK 146 Query: 120 AAYLLRKHEVSRLDVVNFIS----------------HGTRKDEPTQSSDPGSQPNSEEQA 163 +L ++ ++ + + ++ G ++P ++Q Sbjct: 147 CLPILHQNNITYSGIASLLNPTSEVSAGFGVADEAPEGFPDEKPQGDYKHSETKTRDKQT 206 Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 ++NF T+L +LA +DP+IGRE E++R Q+L RR+KNNP+L+GE GVGK+A+ Sbjct: 207 SDTPVIDNFGTDLTKLAADEALDPVIGRENEIQRIAQILSRRKKNNPILIGEPGVGKSAV 266 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILF 283 EGLA I+ G VP ++ I SLD+ S++AGT+YRG FE R + L+K+L + ILF Sbjct: 267 VEGLANLIISGKVPRILQHRRIVSLDMASIVAGTQYRGQFEDRLQRLIKELRAHSEIILF 326 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDEIHTIIGAG ++ G +DAAN++KP L+ G+I+ IG+TT E+ EKD AL RRFQK Sbjct: 327 IDEIHTIIGAG-SAPGSLDAANILKPALARGEIQCIGATTTDEYRKTIEKDGALERRFQK 385 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 I + + E+T++I+ LK +YE HH+V YT A+ A V L +YI+ R LPDKAID +D Sbjct: 386 IQLAPTTPEQTLEILRNLKKRYEEHHNVAYTDDALHACVNLTTRYISGRALPDKAIDALD 445 Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEK-------------------SVSQS 444 EAG+R + V + + + + R K + + Sbjct: 446 EAGSRVHISGVKVPENIEKLEKCIADLKRHKTEAAKAQNYELAANLRDEVAQLTDKLEHA 505 Query: 445 DRDTLKNLGDRL--------------------------------------KMLVFGQDKA 466 ++D + +L + + V QD+A Sbjct: 506 NKDWIDSLKEDRPTVTAEDISTIVSMMSGIPVQRMAQDESIRLKGMKAALQAKVISQDEA 565 Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSE 523 I L AI R GL +P+G+FLF GPTGVGKT + L++ + +L+R DMSE Sbjct: 566 ISHLVRAITRNRLGLKGTDRPIGTFLFVGPTGVGKTYLVKCLAEWMFGSKEDLIRIDMSE 625 Query: 524 YMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDN 583 Y E+++ SRL+GAPPGYVG+D+GG LT+ V +HP++V+LLDEIEKAHPDVFN LLQVMD Sbjct: 626 YGEKYSTSRLVGAPPGYVGYDEGGQLTEKVRRHPYSVILLDEIEKAHPDVFNTLLQVMDE 685 Query: 584 GTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD----------AMEEIK 633 G LTD NG DFRN +++MT+N+G R+ + G+ ++ +TD + ++ Sbjct: 686 GRLTDGNGTTVDFRNTIIIMTSNSGTRQLKDFGRGIGFKEAATDDADGKMVEQIIRKALQ 745 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEK 693 K F+PEF NRLD+II F L+ ++ D I L+ +L++ +SLE++ A++++ +K Sbjct: 746 KQFSPEFLNRLDDIITFHPLTEADAGKIADLEIGALKERLEKMQLSLELTTAAKDYVVKK 805 Query: 694 GYDRAMGARPMARVIQDNLKKPLANELLFGSL-VDGGQVTVALDKEKNELTYGFQS 748 G++ GAR + R IQ N++ + + ++ + T+ D +L F S Sbjct: 806 GFNVQYGARSLKRSIQANIEDAICDLIMNETQDKTEQPQTIRFDVVDEKLVAQFTS 861 >UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWX3_9BACL Length = 824 Score = 634 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 291/824 (35%), Positives = 448/824 (54%), Gaps = 80/824 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 N+ + L A A + + + EHLLLA+L N + + L V R+ + Sbjct: 5 FNETALMVLTTAKEEANDFGVKAVGTEHLLLAMLSMQNTISCKVLNRHGVYYDDFRKSVV 64 Query: 60 AFIEQTTPVLPASEEER-DTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 F E T R ++ + + + VT ++L+++ E+ Sbjct: 65 DFYEAELEGTDFYRNVLMKIDYTNGAVRTIENSQRYADDTSSFVVTSEHLLLSLLEEETG 124 Query: 119 QAAYLL-RKHEVSRLDVVNFISHGTRKDEPTQS---SDPGSQPNSEEQAGGEERMENFTT 174 A LL K ++ +V+ + +K+ S SE + + + + Sbjct: 125 TAVRLLTDKLGINVDALVDELFDLVKKNHALVSKLYEGFKKITESENSSSKTKTLNSLAK 184 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +L + A +DP++ R+KE+ R I++L RR KNNP+L+GE GVGKTAI EGLA RIV Sbjct: 185 DLTRDAFNNKLDPVLARDKEITRMIEILNRRTKNNPVLIGEPGVGKTAIVEGLAERIVSQ 244 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 +VP + + LD+G+LLAGTKYRG+FE+R K ++ ++E + ILFIDEIHTIIGAG Sbjct: 245 NVPSNLLGKRVMVLDMGTLLAGTKYRGEFEERLKNIIAEIEDAGDIILFIDEIHTIIGAG 304 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 + G DA+N++KP LS G I+ IG+TT +E+ FEKD AL RRFQ I + EPS E++ Sbjct: 305 GSE-GSADASNILKPALSRGLIQCIGATTTEEYRKYFEKDAALERRFQPIKVEEPSTEDS 363 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV 414 ++I+ GL+ KYE HHDV +A+ +AV+L+ YI DR LPDKAID+IDEA ++ +L Sbjct: 364 IKILEGLRHKYEEHHDVEILDEAICSAVKLSTTYITDRCLPDKAIDLIDEACSKVKLRYY 423 Query: 415 SKRKKTVNVAD------------------------IESVVARIARIPEKSVSQS------ 444 K D + V I++I E +S Sbjct: 424 KSPDKLKEYEDELTRLNKEKDRAVINQEFEIAAKKRDEVNKVISKIEEFKISWQDSLSKD 483 Query: 445 ---------------------------DRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 + + L L + L V GQD+A+ +L +A++ A Sbjct: 484 KIKITSEHIAEVLAAWTGVPVTKLTESESERLLKLEEILHKRVIGQDEAVVSLAKAVRRA 543 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLI 534 R+G ++P+GSF+F GPTGVGKTE+ LS+AL ++R DMSEYME H++SRL+ Sbjct: 544 RSGFKAPNRPIGSFIFLGPTGVGKTELAKSLSEALFSSEDNMIRIDMSEYMEPHSISRLV 603 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++ G L++ V + P++V+L DEIEKAHP +FNILLQV+D+G LTD +GR Sbjct: 604 GAPPGYVGYEEVGQLSEQVRQKPYSVVLFDEIEKAHPSIFNILLQVLDDGRLTDASGRVI 663 Query: 595 DFRNVVLVMTTNAGVRETERK---------SIGLIHQDNSTDAMEEIKKIFTPEFRNRLD 645 DF+N +++MT+N GV E + SI +++ ME +KK + PEF NR+D Sbjct: 664 DFKNTIIIMTSNVGVSELNDQKFVGFGGSDSIKNDYKNVQNTMMEALKKQYRPEFLNRID 723 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 +II F L + + ++ + I L +L+ + ++++++++A + E G + GARP+ Sbjct: 724 DIIVFKTLEKEELEKISELLIDGLSKRLEDRNITIKLTKKAMAKIVEDGSIKEYGARPLK 783 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 R IQ N++ L+ ELL + G T+ +D +K+ Sbjct: 784 RSIQKNIEDLLSEELLQNPELTG---TINIDYKKDSFVVKKTKR 824 >UniRef50_A4W448 ATPases with chaperone activity, ATP-binding subunit n=73 Tax=Streptococcus RepID=A4W448_STRS2 Length = 817 Score = 633 bits (1633), Expect = e-180, Method: Composition-based stats. Identities = 286/814 (35%), Positives = 444/814 (54%), Gaps = 78/814 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 +++ L+ A A+ + +++ HLLLA + NP A L D++ + + Sbjct: 3 ISRGLQGVYEDAQLIAQRYSSDYLETWHLLLAFVINPDTVAGAILAEYPADVLDYERAV- 61 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ E + + + A + + ++ + + ++ S Sbjct: 62 -YMVMGRRYHEELESFFFLPSSKRVKELQVFAEKIAEIVKSKGLGTEHIFMGMLLDKRST 120 Query: 120 AAYLLRKHEVSRLDV-----------------------VNFISHGTRKDEPTQSSDPGSQ 156 A+ +L + D + I T+ +P Q++ Sbjct: 121 ASQILDQVGFHFEDSDDKVRFLDLRKNLEAKAGFTKEHLKAIRTMTKGGKPKQATVGNMM 180 Query: 157 PNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGES 216 ++ Q+GG +E++T +L LAR G ++P+IGR++E+ R +Q+L R+ KNNP+LVG++ Sbjct: 181 GMTQSQSGG---LEDYTRDLTALARSGQLEPVIGRDEEISRMLQILSRKTKNNPVLVGDA 237 Query: 217 GVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ 276 GVGKTA+A GLA RI G+VP + + I LD+ +++AGT++RGDFE+R ++ +E+ Sbjct: 238 GVGKTALALGLAQRIANGEVPASLVNMRILELDLMNVIAGTRFRGDFEERMNNIINDIEE 297 Query: 277 DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 D ILFIDE+HTI+G+G+ +DAAN++KP LS G +R +G+TT E+ EKD A Sbjct: 298 DGRVILFIDELHTIMGSGSGIDSILDAANILKPALSRGTLRTVGATTQDEYQKHIEKDAA 357 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L RRF K+ I EPS+ ++V I+ GLKP YEAHH V + +AV AV A +Y+ ++LPD Sbjct: 358 LVRRFAKVTIEEPSVADSVAILQGLKPAYEAHHKVTISDQAVVTAVAYAKRYLTSKNLPD 417 Query: 397 KAIDVIDEAGARARLMPVSKRKK------------------------------------- 419 AID++DEA A + + ++ Sbjct: 418 SAIDLLDEASATVQNRAKGQVEEGGLTALDQALMAGKYKTVTQLLLKAQEAENQATSYSL 477 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 V DI + ++R++ IP +SQ+D NL L V GQ++AI A++ AI+ ++ Sbjct: 478 EVTEEDILATLSRLSGIPVTKLSQTDAKKYLNLEQELHKRVIGQEEAISAVSRAIRRNQS 537 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGA 536 G+ H+P GSF+F GPTGVGKTE+ L++ L + L+RFDMSEYME+ SRL GA Sbjct: 538 GIRTGHRPSGSFMFLGPTGVGKTELAKALAEILFDDESALIRFDMSEYMEKFAASRLNGA 597 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG+++GG LT+ V P++VLL DE+EKAHPD+FN+LLQV+D+G LTD GRK DF Sbjct: 598 PPGYVGYEEGGELTEKVRNKPYSVLLFDELEKAHPDIFNVLLQVLDDGVLTDRKGRKVDF 657 Query: 597 RNVVLVMTTNAGVRET-ERKSIGLIHQD-------NSTDAMEEIKKIFTPEFRNRLDNII 648 N V++MT+N G + K++G D E +KK + PEF NR+D + Sbjct: 658 SNTVIIMTSNLGATALRDDKTVGFGALDLSKSQEHVEKRIFEALKKAYRPEFINRIDEKV 717 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F L+ + VV + L KG++L++ A LA++GYD MGARP+ R++ Sbjct: 718 VFHSLTEADMQDVVKVMVKPLIAVAASKGITLKLQASALKLLAKEGYDPEMGARPLRRLL 777 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 Q L+ PLA LL G L G + V + E+ + Sbjct: 778 QTKLEDPLAEMLLRGELPAGVTLKVGVKAEQLKF 811 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 32/96 (33%) Query: 79 QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFI 138 + + Q V + A Q + + ++L+A ++ A +L ++ LD + Sbjct: 2 KISRGLQGVYEDAQLIAQRYSSDYLETWHLLLAFVINPDTVAGAILAEYPADVLDYERAV 61 Query: 139 SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTT 174 + + P+S+ + E Sbjct: 62 YMVMGRRYHEELESFFFLPSSKRVKELQVFAEKIAE 97 >UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum RepID=C3KS27_CLOB6 Length = 746 Score = 631 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 264/752 (35%), Positives = 446/752 (59%), Gaps = 28/752 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 LN EL+ L+ A A + H + VE + L N + + L ++D+ L E+ Sbjct: 4 LNNELKQVLSEAKFIAIKFNHTRIEVEDFFIVLAKHKNSNVYKILRLLNIDVKDLINEVV 63 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + + + E + S + ++ +A + + ++L+A+ E +S Sbjct: 64 SEYKDKNSIRYSQEMLDSIVASDSLKEIIMKASIEAINMKNELIESQHILLALSKE-DST 122 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 ++ + ++ +S +E +SD E + + +L + Sbjct: 123 LGKKIKNKGIDESKILEGLSKIQFSNEKNYNSDE------------ESFLNKYAIDLTKC 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A + ++GRE EL I++L R+ KNNP+L+GE GVGKTAI EGLA IVQG VP+ Sbjct: 171 ALENKFNMVLGREDELGYVIEILLRKSKNNPVLIGEPGVGKTAIVEGLACLIVQGKVPDE 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASG 298 + + IYSLD+G+L+AG+K+RG+FE+R K ++ +++ ILFIDE+HT++GAG+ G Sbjct: 231 LKNKKIYSLDLGALVAGSKFRGEFEERLKKVITEIQNSYGQIILFIDEMHTLVGAGSTDG 290 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA+NL+KP L+ G++ IG+TT +E+ EKD AL RRF+ + + EPSIE+T+ I+ Sbjct: 291 P-MDASNLLKPALARGELHCIGATTIKEYRKYIEKDPALERRFKTVLVEEPSIEKTIHIL 349 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL-----MP 413 +G+K YE +H+V++ A++AAV L+ +YI++R LPDKAID++DEA AR ++ Sbjct: 350 DGIKNIYEDYHNVKFNRSAIKAAVTLSSRYISERFLPDKAIDLLDEAAARKKIISKVDRD 409 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 S V +DI +V++ +IP + + + L+NL LK V GQ+KA++A++ A Sbjct: 410 NSSDVIEVKKSDIAEIVSKWTKIPVSDLLEDEARKLRNLESHLKKRVIGQNKAVQAVSNA 469 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL---LRFDMSEYMERHTV 530 + +R L + KP+GSF+F GPTGVGKTE+ L+K L ++ +R DMSEY ++ + Sbjct: 470 VIRSRVCLSNPRKPIGSFIFLGPTGVGKTELACNLAKILFNDIDSVIRIDMSEYQDKSML 529 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 +RLIGAPPGYVG+++GG LT+ V P++++LLDEIEKAH D+ NI+LQ++D+G +TD Sbjct: 530 ARLIGAPPGYVGYEEGGQLTEKVRCRPYSIVLLDEIEKAHRDIVNIMLQILDDGRVTDGQ 589 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 GR +FRN +++MT+N G ++ ++ + +E+ K F+PEF NR+D I F Sbjct: 590 GRTINFRNTIIIMTSNIGSKDILKEDDEE---KLNQKIKKELIKEFSPEFLNRIDESIIF 646 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 LS D + +++ + E QL K + + +++ + + + D GARP+ R IQ Sbjct: 647 KPLSKDSLIKIISLQLREFIAQLQNKNIKVNITENVKLLILDYLEDLQFGARPIRRSIQS 706 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 + P++ +++ G++V+G + + + ++ E+ Sbjct: 707 KIITPISRKIVEGNIVEGDSILIFDNGKEIEI 738 >UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Tax=Bacteria RepID=Q1WVA6_LACS1 Length = 830 Score = 631 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 286/819 (34%), Positives = 456/819 (55%), Gaps = 78/819 (9%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEA 60 + L +A +A +H+ + EHLLLAL N A + L++ V V +R+E+E Sbjct: 8 TPSAKQVLVLAQQQANYFKHQAIGTEHLLLALTMEKNGVAAKVLQSFVVTEVDVREEIEH 67 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + L + + + VL+RA H + +V ++L+A+ + ++ + Sbjct: 68 IVGYGN--LQRRGADTYLPYSPRTRYVLERAREHAKLFNVEKVGTEHILLALLEDDKTIS 125 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGS-QPNSEEQAGGEERMENFTTNLNQL 179 + +L + V N D T + + ++Q G ++ +L ++ Sbjct: 126 SRILAALNIDLRKVKNITYRTMGVDATTANRTRKKLALSEKKQDNGTPTLDELARDLTEM 185 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 R IDP++GR+ E++R +Q+L RR KNNP+L+GE GVGKTA+AEG + +IV G+VP+ Sbjct: 186 VRKDQIDPVVGRDNEIKRVVQILSRRTKNNPVLLGEPGVGKTAVAEGFSQKIVNGEVPDN 245 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + + LD+GSL+AGTKYRG+FE R K +++++ +D N ILFIDE+HT+IGAG A G Sbjct: 246 LKNKRVMMLDMGSLVAGTKYRGEFEDRLKKIIEEIREDGNVILFIDEMHTLIGAGGAEGA 305 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA+N++KP L+ G+++VIG+TT E+ E D AL RRF + I EP+ E + I+ Sbjct: 306 -IDASNILKPALARGEVQVIGATTLNEYQKYVEADAALERRFASVTINEPTPEVALTILK 364 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+PKYE HH ++ T +A+ +AV+L+ +YI R LPDKAID++DEA AR R+ K K Sbjct: 365 GLRPKYEKHHQLQITDEALESAVKLSKRYIASRFLPDKAIDLMDEAAARVRINNAQKVDK 424 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ---------------- 463 + S +++ ++N +++ + Q Sbjct: 425 VSAIKKKLSELSQEKTEALLKEDFEKAAEIRNEELKIQEKLEKQIQRDKDEEDSNNYRVK 484 Query: 464 ---DKAIEALTEA--IKMARAGLGHEHKPV------------------------------ 488 + E ++E + + + + + Sbjct: 485 VTAEDIAEVVSEWTGVPVTQINRSEGDRLIRLEKILHNRVIGQDEAVKAVSKAIRRARSG 544 Query: 489 --------GSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAP 537 GSF+F GPTGVGKTE+ L++A+ ++R DMSEYME++T SRLIG+P Sbjct: 545 LKDPTRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGSP 604 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+D+GG LT+ V +P++V+LLDE+EKAH DVFNILLQV+D+G LTD+ GRK DFR Sbjct: 605 PGYVGYDEGGQLTEKVRNNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDFR 664 Query: 598 NVVLVMTTNAGVRET-ERKSIGLIHQDNSTD-------AMEEIKKIFTPEFRNRLDNIIW 649 N +++MT+N G + KS+G +D S D E +KK F PEF NRLD I+ Sbjct: 665 NTIIIMTSNLGATALRDEKSVGFGAKDVSDDYEAMAAKVRETLKKTFRPEFLNRLDEIVV 724 Query: 650 FDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 F L+ + IHQ+V + ++ ++ ++L+++ A + +AE G+D GARP+ R++Q Sbjct: 725 FHSLNKEEIHQIVKLMAKNIIDRIKEQNINLKITPAAIDIVAEAGFDAEYGARPIRRILQ 784 Query: 710 DNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 D ++ L+ ELL G++ G VT+ +K E+T ++ Sbjct: 785 DKIEDLLSEELLAGNIETGATVTI--GAKKGEITIKVKN 821 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 28/64 (43%) Query: 80 PTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFIS 139 T S ++VL A + ++L+A+ E+ AA +L+ V+ +DV I Sbjct: 7 YTPSAKQVLVLAQQQANYFKHQAIGTEHLLLALTMEKNGVAAKVLQSFVVTEVDVREEIE 66 Query: 140 HGTR 143 H Sbjct: 67 HIVG 70 >UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding subunit, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CMZ1_STRSV Length = 747 Score = 630 bits (1625), Expect = e-179, Method: Composition-based stats. Identities = 264/753 (35%), Positives = 429/753 (56%), Gaps = 20/753 (2%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSVDLVALRQELEAF 61 L+ LN A A + + + + H+ L A E +D+ + Sbjct: 6 TNLLQEVLNAAKELAIQKHNYQVDIPHVWTVLTQPQAFALEFYTGLDLDINEFISVINQE 65 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + + Q + + +L A VT ++++++F +Q + Sbjct: 66 LAKIPVFSHTDTNRYGRQYSQRLKNLLDDAEAERAELRDEVVTVEHLILSLFHQQRNPIT 125 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 L++ + + V ++ + G + S Q + + + TN NQ Sbjct: 126 VFLKQAGIDKELVAAKLNKARQ----------GKRAISPSQESRYQALSKYATNFNQWLA 175 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 +IGR+ E++ I+VLCR+ K+N +L+G GVGK+ + EG+ R++ DVPE + Sbjct: 176 DQTDRQVIGRKDEIDDIIRVLCRKEKSNAILLGFPGVGKSKVIEGVVGRLLADDVPEHLL 235 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASGGQ 300 ++ L++G L+AGTKYRG+FE+RFKA+L ++ IL+I++IH I+ AG G Sbjct: 236 GKEVFKLNLGGLIAGTKYRGEFEERFKAVLDEVLVAKGKIILYIEDIHQIVTAGRTE-GS 294 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DA NL+KPLL+ G+I +IG+TT+ + FE D+AL RFQ++ I EP ++ + I+ G Sbjct: 295 LDAGNLLKPLLAQGQINIIGTTTFAAYRESFELDQALEGRFQRVRIEEPDQDKALAILQG 354 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA--RARLMPVSKRK 418 L+ Y+ H VR T +A++AA+ L+++Y++DR+LPDKA+D+IDEA A + +L + Sbjct: 355 LRENYQDFHGVRLTDEALQAAISLSIRYLSDRYLPDKALDLIDEACAVKKIQLGQAQTER 414 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V+ DI S+V RI I + + ++R+ L NL L+ + GQD+A++ ++EAI +R Sbjct: 415 PDVSREDIASIVERITGIKVQGIMDNEREHLLNLDKLLRQRIVGQDQAVQKVSEAILRSR 474 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIG 535 AG+ + +P+GSFLF GPTGVGKT + L++ L ++R DMSEYME+H V+RL+G Sbjct: 475 AGIQNPKRPIGSFLFLGPTGVGKTALAKALAERLFGNELEMVRLDMSEYMEKHAVARLVG 534 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 PPGYVGF++GG LT+AV + ++++LLDEIEKAHPDVFN LLQV+D G LTD+ GR D Sbjct: 535 PPPGYVGFEEGGQLTEAVRRRLYSIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTID 594 Query: 596 FRNVVLVMTTNAGVRETER--KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHL 653 F+N +L+MT+N G ++ KS + + + + ++ F PEF NR+D + F+ L Sbjct: 595 FKNTILIMTSNIGSQQILESLKSEQGLTAETQEEVLSLLQHSFKPEFLNRIDETVVFNPL 654 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + +V + +LQ +L+ + + L +S+E +LA+KGY GARP+ R I L+ Sbjct: 655 RAEDMINIVKIMVRQLQERLEHQKIQLHLSEEVYAFLAQKGYQPEFGARPIQRSIMRYLE 714 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 PLA L+ V V+L + + Y Sbjct: 715 TPLARYLVENKETTEMTVQVSLKDGQLDFNYLV 747 >UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD Length = 745 Score = 630 bits (1624), Expect = e-179, Method: Composition-based stats. Identities = 271/769 (35%), Positives = 416/769 (54%), Gaps = 45/769 (5%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP-SAREALEACSVDLVALRQELEAF 61 + L + A H + EHLLL L+ +A L L LR+ +E Sbjct: 5 DDRARLVFHYAREEGNRLGHAMVGPEHLLLGLMREGGTAATILSEFGASLDGLRRRVEEI 64 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 I + T +RV++ A +S G + ++L+ I E + A Sbjct: 65 IGRGEGNRLNDA----PSITPRARRVMELASAEARSLGAQVTSTEHILLGIIREGDGVAF 120 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 +L++ + + + ++ + +L + AR Sbjct: 121 RILQELTKDVDTIRWRVLA-----------QGDGSSGKAAKPVATPFLDEYGRDLTKQAR 169 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G +DP+IGR +E+ R Q+L RR KNNP+L+G+ GVGKTAI EGLA I + P + Sbjct: 170 EGKLDPVIGRSEEIRRVTQILTRRTKNNPVLIGDPGVGKTAIVEGLALAIFEKRTPPNLH 229 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 + SLD+ ++AGTKYRG+FE+R + ++++L + + FIDE+HT++GAG A G + Sbjct: 230 GVRLVSLDLSGVVAGTKYRGEFEERLRQIIEELR-NAKVMAFIDELHTLVGAGGAE-GTL 287 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DAAN++KP LS G+I+VIG+TT E+ EKD AL RRFQ + + EPS ET+QI+ GL Sbjct: 288 DAANILKPALSRGEIQVIGATTTGEYHRYIEKDAALERRFQPVIVLEPSPAETLQILRGL 347 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM--------P 413 +P+YE HH V+ A+ AV + + + R+ PDKAID+IDEA +R RL Sbjct: 348 RPRYEEHHGVQIPESALELAVRIGERSLPGRNFPDKAIDLIDEAASRVRLNMSVGLPVSE 407 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 + V+ DIESV+ + I S L +L ++L+ V+GQ +AI+AL+ A Sbjct: 408 TEDGEPMVSREDIESVINSMGGI----YSDESAGQLSDLEEQLQEQVYGQPEAIKALSSA 463 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTV 530 ++ AR GLG + SFLF GP+GVGKT + L+K L L+R DMSE+ E H++ Sbjct: 464 LRRARVGLGGRTRVSASFLFVGPSGVGKTHLAKALAKTLFGSERSLIRVDMSEFQEAHSI 523 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 S+LIG+PPGYVGF+QGG LT+AV + P +V+LLDEIEKAHPDV+N LQV+D+G LTD Sbjct: 524 SKLIGSPPGYVGFEQGGRLTEAVRRQPFSVILLDEIEKAHPDVYNTFLQVLDDGRLTDGL 583 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 GR DFR +++MT+N G ++G +A ++ IFTPEF +RLD++I F Sbjct: 584 GRTVDFRRTIIIMTSNTGFNV--NPTVGFSPVTPDNNA--PLRNIFTPEFLDRLDDVIRF 639 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAE--KGYDRAMGA---RPMA 705 L D + +V + + E++ +L + +++ WL K R + Sbjct: 640 RPLGEDELVRVAQQLLGEMREELASRELNVTFDPAIAAWLVSKLKARSPKHAVGSSRQLR 699 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKA 754 ++++ ++ PLA EL+ G ++ V L ++ + G + + A Sbjct: 700 TLLREEIEDPLALELIGN---AGEELRVVLGQDGIQFERGKTAPPQILA 745 >UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RFB8_ANAPD Length = 814 Score = 630 bits (1624), Expect = e-179, Method: Composition-based stats. Identities = 299/813 (36%), Positives = 454/813 (55%), Gaps = 87/813 (10%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELE 59 M N L + A + H+++ EHLLLAL+ S A +ALE + R + Sbjct: 1 MENNRLNRLTSQARRESYSLNHDYIGSEHLLLALMKTGSLANKALEKSGANYDLFRSIVI 60 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + PA+E + + + +++ + + V ++L A+ ++ +S Sbjct: 61 NNIGRGNSQRPATE------FSKKVRMIFEKSREIAMARKSSVVNEEDILQALINDDDSF 114 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + + + + + ++ T+ S N + +T +LN+L Sbjct: 115 TNLMFLLSGLDKKVIGKNLDDMLKEVYKTKGSSSKFSEN----------VTKYTNDLNEL 164 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G IDP+IGR+ E+ER +Q+L RRRKNNP+L+G GVGKTAIAEGLA RIV DVP++ Sbjct: 165 AESGKIDPVIGRDTEIERLVQILMRRRKNNPILIGAPGVGKTAIAEGLAQRIVAKDVPKI 224 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D I SLD+ S++AG+KYRGDFE R K L +++ + + ILFIDE H ++GAGA+ G Sbjct: 225 IKDKRILSLDLASMIAGSKYRGDFEDRLKKLFEEIGKRDDVILFIDEFHMVLGAGASE-G 283 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP+L+ G+I+++G+TT +E+ EKD AL+RR Q I + EPS+E+ +II Sbjct: 284 SMDAANILKPILAKGEIQIMGATTIEEYRKHVEKDSALSRRMQPIQVDEPSLEDARKIIQ 343 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID---------------- 403 GLK KYE HH V T +A+ AAV+L+ +YI+DR+LPDKAID+ID Sbjct: 344 GLKDKYEDHHGVEITDEAIEAAVDLSDRYISDRYLPDKAIDLIDEASSKIRIAAFQKEDD 403 Query: 404 ------------------------EAGARARLMPVS---------------KRKKTVNVA 424 E A R K + ++ Sbjct: 404 SAPSEDKLEKLNKEKEQAVRDQDFERAAELRDKINQAKFDLEIEKEKEKENKDRLFISYD 463 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI SVVA +++P + +++ + + NL + LK+ V GQ AI+++ +IK AR GL Sbjct: 464 DIASVVANWSKVPVEKLTEDEMEKYANLDEDLKLSVIGQKDAIDSVARSIKRARVGLKDP 523 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYV 541 KP+GSF+F GPTGVGKT + L++ L +L+R DMSEYME+ VSRL+G+PPGYV Sbjct: 524 KKPIGSFIFVGPTGVGKTYLAKTLAQNLFGSEDKLIRMDMSEYMEKFAVSRLVGSPPGYV 583 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+++GG LT+AV +P++V+L DEIEKAHPDVFN+LLQ++D+G LTD GR DF+N ++ Sbjct: 584 GYEEGGQLTEAVRTNPYSVILFDEIEKAHPDVFNLLLQILDDGRLTDGQGRTVDFKNTII 643 Query: 602 VMTTNAGVRETE-RKSIGLIHQDNSTD--------AMEEIKKIFTPEFRNRLDNIIWFDH 652 +MT+N GVR KSIG D + IK F PEF NRLD +I F Sbjct: 644 IMTSNIGVRSLSTSKSIGFELGDQKEAEEERTSEIIEKAIKDSFAPEFLNRLDQVIMFKP 703 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 L I ++ + + + +L++ + + Q+ LA++G+D GARP+ R I + Sbjct: 704 LGEAEIGEISGLMLEKTRQRLNEIDLDIVYDQKVVKLLAKEGFDPEYGARPLERHITKMI 763 Query: 713 KKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 LA ++L G L + +++ K+ L + Sbjct: 764 DDRLAEDILDGKLKRDETIRISV--RKDSLVFR 794 >UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HLYB_TREHY Length = 828 Score = 630 bits (1624), Expect = e-179, Method: Composition-based stats. Identities = 292/823 (35%), Positives = 472/823 (57%), Gaps = 76/823 (9%) Query: 2 LNQELELSLNM-AFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQEL 58 L + + + + A A+ H+ +T EH+LL LL A L +DL L+ EL Sbjct: 6 LTSKAKKVIELYAQEEAKRLNHDMVTPEHILLGLLYESEALATRVLMRLKIDLDRLKLEL 65 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E+ + ++ ++ Q+++ R+ ++ N + ++L+ + E+ Sbjct: 66 ESAMVKS----STTKVFGTLPTAPRVQKLISRSAEEARALSHNYIGTEHLLLGLLREESG 121 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 A +L + + I SS + + ++ F +L + Sbjct: 122 TAYNVLTSMGLELTILRQEILKMLGVAGSNISSMEQTSQEDNVKKVKTPTLDQFARDLTK 181 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 +AR +D +IGRE E+ R +Q+L RR+KNNP+L+GE GVGKTAI EGLA +IV DVP+ Sbjct: 182 MARDKALDRVIGRENEVMRVVQILSRRKKNNPILLGEPGVGKTAIVEGLAEKIVAADVPD 241 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 ++ + +LD+ S++AGTKYRG+FE+R K ++ ++++ +N I+FIDE+HT+IGAG A G Sbjct: 242 ILLKKRVLTLDLSSVVAGTKYRGEFEERIKNIVLEIKKASNIIIFIDELHTLIGAGGAEG 301 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DAAN++KP LS G+I+ IG+TT E+ EKD AL RRFQ I++ EPSIE+T++I+ Sbjct: 302 A-LDAANMLKPALSRGEIQCIGATTINEYKKYIEKDGALVRRFQPINVEEPSIEDTIEIL 360 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 NG+K KYE HH V+YT +A+ AA L+ +YI +RHLPDKAID+IDEAG+RARL+ +++ + Sbjct: 361 NGIKGKYEEHHKVKYTDEAINAAAVLSKRYIFERHLPDKAIDLIDEAGSRARLLNMTRPQ 420 Query: 419 KTVNVADIESVVARIARIPEKSVSQSD--------------------------------- 445 + ++ + + + +S + D Sbjct: 421 EFKDLEKKIEELNQQKKRVVESQNFEDAAKIRDEITSLQEELSKKEEKCREEREKIETFI 480 Query: 446 -------------RDTLKNLGDRLKMLVFGQD-----------KAIEALTEAIKMARAGL 481 +K L + + G + +AI ++++AI+ +RAGL Sbjct: 481 EEDDIRHVISEITNIPIKRLLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRRSRAGL 540 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPP 538 +P+GSF+F GPTGVGKT + LS+ + + L+R DMSE+ME+ VSRLIGAPP Sbjct: 541 KTSKRPLGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGAPP 600 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+++GG LT+ V + P++++L DEIEKAHPDV NILLQV++ G LTDN GRK DF N Sbjct: 601 GYVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNFGRKVDFSN 660 Query: 599 VVLVMTTNAGVRETER-KSIGLIHQDNSTD-------AMEEIKKIFTPEFRNRLDNIIWF 650 ++++T+N G R+ + S+G + D A+EE+K+ F PEF NR+D+II F Sbjct: 661 TIIIITSNLGARDIVKGSSLGFNAVGSEKDANDIKNFALEELKQNFNPEFLNRIDDIIVF 720 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 LS + + +++ + EL + ++ + + +S+EA+N++ +KG+D+ GAR + R IQ Sbjct: 721 HTLSKEDLKDIINIMLKELNEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQK 780 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHK 753 ++ ++ E+LFG++ DG + V + +Y ++K Sbjct: 781 EIEDYVSTEILFGNIEDGDTINVDRNDGSLIFSYDKSVKTENK 823 >UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0P0_9FIRM Length = 833 Score = 626 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 293/812 (36%), Positives = 443/812 (54%), Gaps = 76/812 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 Q ++ + A+ ++ LLL +L + +A EAL+ C VD + E Sbjct: 7 FTQAAIKAVEFSQYIAQRRGKGYIGTGQLLLGILHMRDTTAAEALDKCGVDYDSA----E 62 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + E T QRV+Q A+ + R+ VT ++L+++ +E E Sbjct: 63 QVIREGDGFQDVLTPEETPYYTRRAQRVMQGAIDTARE-ERSFVTTEHILLSLLAEGEGT 121 Query: 120 AAYLLRKHEVSRLDVVNFIS-HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 A L V + N + +E + + + + G ++ + T+L Sbjct: 122 AIQTLEDLNVDIEALQNDVRAQMEDTEEAPKERSARRKTGKDSRKGLPASLKKYGTDLTA 181 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A G +DP+IGR E++R IQ+L RR KNNPLL+GE+GVGKTAIAEGLA RI G+VP Sbjct: 182 AAGGGELDPVIGRTAEIDRVIQILARRTKNNPLLLGEAGVGKTAIAEGLARRIAAGEVPF 241 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 ++ D I +L + +L+AGTKYRG+FE+R K ++ + + N ILFIDEIHT+I AG A G Sbjct: 242 LLEDKRIVTLSMTALVAGTKYRGEFEERLKNVVDDVVKAKNIILFIDEIHTLIRAGGAEG 301 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DAAN++KP L+ G++++IG+TT E+ F KD ALARRFQ + + EP + QI+ Sbjct: 302 A-LDAANILKPALARGQMQIIGATTLSEYKKYFAKDGALARRFQTVTVDEPGEADAEQIL 360 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM------ 412 GL+ +YE H R AV AAV L+ +Y+ DR LPDKAID++DEA +R R+ Sbjct: 361 LGLRGRYEEFHHARIEDGAVTAAVRLSRRYLTDRFLPDKAIDLMDEAASRVRMKSVGGTD 420 Query: 413 ------------------PVSKRKKTVNVADIESVVARIARIPEKSVSQS---------- 444 +S++ + A++ S+ Sbjct: 421 KLVGLRREIAGVVKDKNTAISRQDYETAAKLRDREKELHAKLEASRRSEDTRTEIRVTEN 480 Query: 445 --------------------DRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 + D L L + V GQD+A+ A+ A++ ARAG+ Sbjct: 481 DIADVVAQWTGIPVQRIAAKESDRLLALETHIGRRVIGQDEAVRAVARAVRRARAGVKDP 540 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYV 541 +P+GSFLF G TGVGKTE+ L++A+ ++RFDMSEYME+HT +RL+GAPPGYV Sbjct: 541 RRPIGSFLFLGATGVGKTELARALAEAVFGTEEAIIRFDMSEYMEKHTTARLVGAPPGYV 600 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+++GG LTDAV + P +++L DE+EKAHPDVF++LLQV+++G LTD GR DFRN ++ Sbjct: 601 GYEEGGQLTDAVRRKPFSIILFDEVEKAHPDVFHMLLQVLEDGRLTDGQGRVTDFRNTII 660 Query: 602 VMTTNAGVRETE--RKSIGL--------IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 +MT+NAG R +IG + +EE++KIF PEF NR+D++I F+ Sbjct: 661 IMTSNAGADHLRSTRGTIGFAVGLQARADEEQAKKRVLEEVRKIFRPEFLNRVDDMIVFN 720 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L + ++VD + +++V+L ++ +++EVS A+ L KG D GARP+ R IQ N Sbjct: 721 ALGEPELSKIVDILLRDVKVRLAEQKINIEVSPSAKRVLIAKGADVKFGARPLRRAIQKN 780 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 ++ LA +L G ++V + Sbjct: 781 IEDALAEHILARDFASGDSISVRKLGDGLNFV 812 >UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma subunit n=1 Tax=Thalassiosira pseudonana RepID=B8BXC6_THAPS Length = 890 Score = 625 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 268/768 (34%), Positives = 415/768 (54%), Gaps = 46/768 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALR---QE 57 +++E SL A + + E + L ++ P AR L++ + L + + Sbjct: 76 MSEECIGSLVTAQNESARLGQSTVGCEVMTLGIIDRPEKARRTLKSYGITLRKAKLTVET 135 Query: 58 LEAFIEQTTPVLPASEEERDT--QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE 115 + + +L +++ RD + +RVL A S V +VL+A+ Sbjct: 136 INNIFTMSPQLLNMNKKARDVELPFAPALKRVLTFAGAIADSLDSPTVNSEHVLLALMEG 195 Query: 116 QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 +S S + + + + + + + Sbjct: 196 VDSTT--------FSAAEFCRRLVMDIKYPNEPMVGEGPQLVSGNGGELSTPTLSEVGVD 247 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L LA +DP+ GR++E+ A++ L RRRKNNP L+GE GVGKTAIAEG+A + Sbjct: 248 LTDLAARMELDPVHGRDEEVRAALRTLVRRRKNNPCLMGEPGVGKTAIAEGVAQILAA-- 305 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL--EQDTNSILFIDEIHTIIGA 293 P ++ + I SL++ +L+AGTKYRG+FE+R +A+++++ E+ +ILFIDEIHT++GA Sbjct: 306 -PNMLRNHRIISLELANLVAGTKYRGEFEERLQAIVEEVTDERAPPTILFIDEIHTLVGA 364 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G+A GG +DAAN++KP L+ GK++VIG+TT E+ EKD AL RR Q + + EP+I++ Sbjct: 365 GSAEGG-IDAANMLKPALARGKLQVIGATTISEYRKYIEKDAALERRLQPLMVKEPTIDQ 423 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 TVQI+ + +Y AHH VRYT +++ AA +L+ +Y+ DR LPDKAID++DEAGA + Sbjct: 424 TVQILEAIAEQYGAHHGVRYTPESLVAAAKLSERYVTDRFLPDKAIDLLDEAGASVHIEH 483 Query: 414 V-----SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIE 468 S V DI S++++ IP ++ ++ TL L L V GQ++AI+ Sbjct: 484 AFNPSGSTNTPEVTDQDISSIISQWTNIPIGKLTSTESSTLLTLESSLASRVKGQERAIK 543 Query: 469 ALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYM 525 ++ A++ AR+GL +PV SFLF G TGVGKT + L+ +++R DMSEYM Sbjct: 544 SIARAVRRARSGLRDAGRPVASFLFCGSTGVGKTWLAKSLAAQYYGSEKDMVRIDMSEYM 603 Query: 526 ERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGT 585 E+HT SRL G PPGYVG+++GG LT+AV + PH+V+LLDEIEKAH DV N+LLQVM++G Sbjct: 604 EKHTASRLTGPPPGYVGYEEGGQLTEAVRRAPHSVVLLDEIEKAHRDVLNVLLQVMEDGV 663 Query: 586 LTDNNGRKADFRNVVLVMTTNAGVRETERKSIG---------------LIHQDNSTDAME 630 LTD GR F+NV+LVMT+N G + G + S E Sbjct: 664 LTDGKGRTICFKNVILVMTSNVGSAKIMELVNGDAGEFDSDTTSLDAAEDYAALSEVVQE 723 Query: 631 EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNW 689 E+ K PE NR+D II F L + + + + + ++ ++L S + Sbjct: 724 ELTKEMKPELLNRIDEIIVFSPLGDENLRDIAKAIVDASIERAFKERSITLSASDSLIDA 783 Query: 690 LAEKGY--DRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 + G GARPM R Q + +++ ++ G L + TV + Sbjct: 784 VVMDGSMNAAEFGARPMRRAAQRLFEDAVSDAIVRGFLQEDDHATVDM 831 >UniRef50_D1PH53 ATP-dependent Clp protease, ATP-binding subunit ClpA n=1 Tax=Prevotella copri DSM 18205 RepID=D1PH53_9BACT Length = 761 Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 310/758 (40%), Positives = 469/758 (61%), Gaps = 17/758 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 L + + + ++ A +AR HEF+ EH+LLALL + +AL+ VD + ++L + Sbjct: 6 LTRYMSVLMDDAMKQARFFDHEFVMPEHMLLALLRQYAFCQALQEEGVDSFKMHEDLVGW 65 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + + V + +P+ F+ + A ++ R V + + A+F Q S+AA Sbjct: 66 LAKQERVPETIK--YLPEPSSLFKTMFGTACALAAAADRQLVNVPHFVQAMFGLQNSEAA 123 Query: 122 YLLRKHEVSRL-DVVNFISH-----------GTRKDEPTQSSDPGSQPNSEEQAGGEERM 169 +LL K+ R + + + G D ++ + +E+ G + + Sbjct: 124 FLLCKNVGDRQGEFLASVDSYYPIGEDTGEAGMGMGADFDDDDYANEYDDDEEEGRRQVV 183 Query: 170 ENFTTNLNQLARV-GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +++ + ++ +PLIGRE+EL+R IQVLCR KNNPL +GE+GVGKTA+ GLA Sbjct: 184 QDWHQLVTCISDKVEEHNPLIGREQELDRTIQVLCRAEKNNPLHIGEAGVGKTALVYGLA 243 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 I + VPE + IY +D+G +LAG +YRGDFEKR K +++ ++ N+I++IDEIH Sbjct: 244 KLINENQVPERLKGARIYGMDMGQMLAGAQYRGDFEKRIKMVMEGAVKEGNTIIYIDEIH 303 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 +IGAG S G DA+N++K L +G IR IGSTTY+E++ + + + RRFQ+IDI E Sbjct: 304 NMIGAGRGSDGGPDASNMLKQYLEAGDIRFIGSTTYEEYNRYMAQSKGIVRRFQQIDIKE 363 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 P+ EE ++I+ GL+ KY H+V Y A+ AV + KYI++R LPDKAID++DEAGA Sbjct: 364 PTEEEAIKILEGLQYKYNKFHNVTYRKDALEYAVRASAKYISNRCLPDKAIDLMDEAGAY 423 Query: 409 ARLMP-VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 + P S+++ V + I+ ++ ++ +I ++ + D L L R+ ++GQDKA+ Sbjct: 424 LEVHPVESRQRSYVTKSIIQQILIKVCKIDAAAMKDENNDALATLRQRILDKIYGQDKAV 483 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMER 527 + + EA+ MA+AGL + KP+ S LF GPTGVGKTEV QL+K LGIEL+RFDMSEY E+ Sbjct: 484 DKVVEAVMMAKAGLTDDDKPLASLLFVGPTGVGKTEVARQLAKELGIELVRFDMSEYTEK 543 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 HTV++LIG+P GYVG++ GGLLTDA+ K P+ VLLLDEIEKAH D++NILLQVMD LT Sbjct: 544 HTVAKLIGSPAGYVGYEDGGLLTDAIRKTPNCVLLLDEIEKAHSDIYNILLQVMDYARLT 603 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-EEIKKIFTPEFRNRLDN 646 DN G+KADFRNV+L+MT+NAG + R S+G + +AM ++KK F PEF NRL + Sbjct: 604 DNKGQKADFRNVILIMTSNAGAQYASRASVGFNGNVSRGEAMLAQVKKTFKPEFINRLSD 663 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 ++ F+ + + ++ K + +L +L KGV++ ++ AR L + G+ + GAR M R Sbjct: 664 MVVFNDMDKHMAELILAKKLRQLDAKLAAKGVTVTLTDAAREQLLKWGFTKEYGAREMDR 723 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 I + LK L LLFG L GG+ V D ++ + Y Sbjct: 724 AIGNRLKPILMKALLFGKLKKGGKAHVDFDGKELVVNY 761 >UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Ruminococcaceae RepID=C7H753_9FIRM Length = 777 Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 282/753 (37%), Positives = 427/753 (56%), Gaps = 29/753 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 ++E L L+ A A HLLLA+L A L ++ A+R++L Sbjct: 24 FSREAGLLLDEAVELAGSMGCARADTGHLLLAMLQTDRGPAGRFLAGKNITEPAVRRQLA 83 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + +R + A+ Q++ + ++L A+ + + Sbjct: 84 E------GRTSPARQLDRKALAPDLRRAMDYALIGAQNAHLPKAEPEHLLCAMLEDTDCA 137 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A LL V + V + + + + P + + + +L + Sbjct: 138 AGVLLASMGVQLAEAVRECRQISGQFILPGTPRASAMPRGSRAS------DKYCRDLTRR 191 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP+ R+ EL+R +++LCRR+KNNP LVGE GVGKTA+AEGLA RI +VP + Sbjct: 192 AVDGELDPVFCRDAELDRMVEILCRRQKNNPCLVGEPGVGKTALAEGLAQRIASRNVPRM 251 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + +LD+ SL+AGTKYRGDFE+RFK LL++L +D ++ILF+DE HTI+GAGAA G Sbjct: 252 LQGRRLLALDMASLVAGTKYRGDFEERFKTLLEELVRDGSAILFVDEFHTIVGAGAAEGA 311 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAA+++KP+L+ G++++IG+TT QEF +KD AL RRF ++ I EP+ + I+ Sbjct: 312 -IDAASILKPVLARGELQLIGATTDQEFRTHIQKDAALERRFGRVQIEEPTPAQAAAILE 370 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG--ARARLMPVSKR 417 GL P+YE +H V + +R AVEL+V+Y+ R LPDKAID++DEA AR R K Sbjct: 371 GLAPRYERYHSVHLPPETLREAVELSVRYLPGRFLPDKAIDLVDEACAAARIRAEREGKA 430 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 T+ DI VVA+ + +P + V + +R+ L L RL + GQ KA+ A+ AI+ + Sbjct: 431 DPTLTREDIARVVAQASGVPVERVGEKERERLDKLESRLNAEIVGQQKAVAAVAGAIRRS 490 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLI 534 R GLG +P+G+ LF GPTGVGKT + L+ + LL+FDMSEY E+HT +RL+ Sbjct: 491 RTGLGEPGRPMGAMLFLGPTGVGKTALAKALAASWFGSEKALLKFDMSEYQEQHTTARLL 550 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGY+G D+GG LT+AV + P++V+L DEIEKAHPD+ NILLQ++++G LTD GRKA Sbjct: 551 GAPPGYLGHDEGGQLTEAVRRRPYSVVLFDEIEKAHPDIQNILLQILEDGQLTDAMGRKA 610 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA--------MEEIKKIFTPEFRNRLDN 646 DFRN ++++T+N G R +S L S +EE KK F PE RLD Sbjct: 611 DFRNTIVLLTSNLGARFLAGQSAPLGFAAGSEAVFEKQSAQAIEEAKKWFRPELVGRLDE 670 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 +I F L+ D + + +K + +L+ + + G L + LA + GAR + R Sbjct: 671 LIVFRPLAEDSLCAIAEKLLGQLEARAARNGYQLTHTPRVGAVLAARARSP-YGARELRR 729 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 + +++ LAN++ G+ G T + Sbjct: 730 QVDRAVEQALANQIASGTAHTGQHWTADCTVDG 762 >UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E9C6_9ACTN Length = 880 Score = 624 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 280/844 (33%), Positives = 432/844 (51%), Gaps = 93/844 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++MA A + + EHLLLAL A EAL + + + L+ Sbjct: 5 FTDRARKVMSMAKQEALDLHSNKVGTEHLLLALAKEDEGIAAEALRSLDISYDDIMDTLK 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ T P E T V++R+ + + + V+ ++L+ I E Sbjct: 65 E-VQTTVPEPSEETEAAKLAFTPLVISVMERSFRVARENNQTYVSTEHLLIGIVEEGNGM 123 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSD--------------PGSQPNSEEQAGG 165 A +L + VS + I T KD+ + S+++ G Sbjct: 124 AMDILMRLGVSSASIKKAIEKLTAKDQDKKRPLAGAGAGRPGAGLPFFSGSDASQQKGSG 183 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 E ++ F TNL Q AR G +DP+IGREKE++R +++L RR KNNPL++G+ GVGKTAI E Sbjct: 184 TETLKQFATNLTQKARDGELDPVIGREKEVQRMMEILSRRTKNNPLILGDPGVGKTAIVE 243 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFID 285 GLA +I G+VPE + + I++LD+ L+AG KYRG+FE+R K ++++ + + ILFID Sbjct: 244 GLAQQIAAGNVPENLMNQNIWTLDLPGLVAGAKYRGEFEERLKNVIQEATEADDVILFID 303 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 E+HTIIGAG+A G +DA++++KP+L+ G ++IG+TT +EF KD A RRFQ ID Sbjct: 304 EMHTIIGAGSAE-GSIDASSMLKPVLARGAFQIIGATTAEEFRKYLTKDPAFERRFQTID 362 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 + EPS+E+TV+I+ LKP+YE HH VRYT A+ AA L+ +YI DR LPDKAID+IDEA Sbjct: 363 VEEPSVEDTVKILTALKPRYEEHHHVRYTQGAIEAAANLSNRYIQDRFLPDKAIDLIDEA 422 Query: 406 GARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDK 465 GARAR+ + + A+ + D + + ++ K + Sbjct: 423 GARARIAANRAPEPVREAEHRVEELKAAAQE---ATESDDMNKAAEITEQQKAAEIELAE 479 Query: 466 AIEA----------------------LTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTE 503 A A +T + ++ + + + +G+ E Sbjct: 480 AKAAWTAELDASPLTIDVSQIADIVSVTSGVPVSSLTESESRRLLQAESVLKTRIIGQDE 539 Query: 504 V--------------------------------------TVQLSKALG---IELLRFDMS 522 L++ L L+ FDMS Sbjct: 540 AVEAVAKAVRRSRSPLKDPRRPGGSFIFLGPTGTGKTELAKTLAEYLFGSKDALISFDMS 599 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 E+ VS+LIG+PPGYVG D+GG LT AV +HP++V+L DEIEKAHPD+FNILLQV++ Sbjct: 600 EFGSEFEVSKLIGSPPGYVGHDEGGQLTKAVRRHPYSVVLFDEIEKAHPDIFNILLQVLE 659 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRETERKS---------IGLIHQDNSTDAMEEIK 633 G LTD+ G+ DFRN V++MT+N G RE + + GL + AM E+K Sbjct: 660 EGRLTDSQGKTVDFRNTVIIMTSNVGAREIAQDASVGFGTTGEQGLTSSEIKGRAMGELK 719 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEK 693 ++F PE NR+D+I+ F LS + + ++ + +L+ +L G++++++ A + + + Sbjct: 720 RLFRPELLNRIDDIVVFQKLSGENLTKIAHLLVDDLRQRLIANGMNIKLTDAAYDKIVAE 779 Query: 694 GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHK 753 G D GARP+ R IQ ++ PL+ ELL G +G V + K ++G + Sbjct: 780 GTDLTNGARPLRRAIQKLIEDPLSEELLAGEWGEGDTVLCDVADGKFVFSHGTGEIPAPR 839 Query: 754 AEAA 757 A Sbjct: 840 PAGA 843 >UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG60_9BACT Length = 802 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 264/815 (32%), Positives = 425/815 (52%), Gaps = 90/815 (11%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQEL 58 + + A + + EH+LL LL A E +D+ L ++ Sbjct: 4 LFTDRARRVILFAREASERLMQTSIDTEHILLGLLRERSGLAAEIFSRRGIDVSMLMNDV 63 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + E+ ++ + + + VL +V ++ V ++L+ + E++ Sbjct: 64 KGVSEKGHNLMIKGS----LPFSQNGKNVLDFSVEEAKNLKNKYVNTEHILLGLLKEKKG 119 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 +A+ LL K + + I ++ F +L + Sbjct: 120 KASMLLSKLGFDLVTLREEI------------QTVSKSYAKNTDQAVTPTLDEFGRDLTK 167 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 LA G +DP+IGR E+ R IQ+L RR KNN +++GE GVGKTAI EGLA ++ DVP+ Sbjct: 168 LAMDGKLDPVIGRSTEITRLIQILGRRIKNNAVIIGEPGVGKTAIVEGLALKMASEDVPD 227 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + ++SL++G+++AGTKYRG FE+R K L+K++E D N I+FIDEIHTI+GAGAA Sbjct: 228 FLRNKRLFSLELGNVVAGTKYRGQFEERMKNLIKEIETDGNVIIFIDEIHTIVGAGAAE- 286 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA+N++KP L+ G + IG+TT EF FEKD AL RRFQ I + +P +ETVQI+ Sbjct: 287 GSIDASNMLKPALARGVFQCIGATTLSEFRKNFEKDGALNRRFQTISVDQPDADETVQIL 346 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 +G+K YE H V + L +YI ++ PDK+IDV+DEA +R +L + Sbjct: 347 DGIKRFYEDFHKVFIPHDVLEEITRLTDRYITEKFQPDKSIDVLDEACSRLKLATRTMPD 406 Query: 419 KTVNVADIESVVA------------------------RIARIPEKSVSQSDRDTLK---- 450 V + + + ++ + L Sbjct: 407 DMVRIKNKLEQLKGLRDEKLRANDYDNIQKYSKDVERWATKLSVAQKEWEEELDLDWPTL 466 Query: 451 -----------------------------NLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 N+ +K + GQD+A++AL+ ++K + AGL Sbjct: 467 TIENISEVVAHMTGVPVQKLQTDDMARIANIDKDIKEFIIGQDEAVDALSRSVKRSFAGL 526 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPP 538 + +P+GSF+F GPTGVGKTEV +L++ + L+R DM+EYMER SRLIGAPP Sbjct: 527 SNPARPLGSFIFMGPTGVGKTEVAKKLAETVFGSESSLIRIDMTEYMERFNSSRLIGAPP 586 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+++GG LT+ V + P++V+L DEIEKAHP+V NILLQ++D+G + D+ G K +F+N Sbjct: 587 GYVGYEEGGKLTEQVRRKPYSVVLFDEIEKAHPEVLNILLQILDDGHINDSLGHKVNFKN 646 Query: 599 VVLVMTTNAGVRE-TERKSIGLIHQDN----------STDAMEEIKKIFTPEFRNRLDNI 647 +++MT+N G + RK++G ++ ST+A E+K F PEF NR+D++ Sbjct: 647 TIIIMTSNLGTKLSMNRKTLGFDTKEESNNEIDYDVFSTNAHRELKDRFPPEFINRVDSL 706 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 + F L + +++D ++E+ +L+ G L + Q+ + L Y+ + GARP+ R+ Sbjct: 707 VVFKPLGKAELIEIIDLQLIEINKRLEIAGKQLTIDQDVKEHLLSGEYEYSYGARPIKRL 766 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 +Q ++ PL+ LL G + V + ++ Sbjct: 767 LQSKIEDPLSEILLEGKFAKRKNLKVKMINDEIVF 801 >UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding subunit n=1 Tax=Rhodococcus opacus B4 RepID=C1ASB5_RHOOB Length = 748 Score = 622 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 275/770 (35%), Positives = 420/770 (54%), Gaps = 53/770 (6%) Query: 2 LNQELELSLNMAFA----RAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALR 55 +L+ A A A EH+L+ALL + EA VD LR Sbjct: 5 FTTRALEALDWAQAQSIPVATR-------PEHVLMALLDQDATIVEPVFEALGVDADDLR 57 Query: 56 QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE 115 + + T A+ +L+ A + + V+ ++L+A+ Sbjct: 58 RSSPSV----TVRRGAAASAAAPGIDADMASLLRAAEHEARQLSDHLVSIEHLLIALAGR 113 Query: 116 QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG-EERMENFTT 174 ++ LR R ++ + + + + ++ ++ Sbjct: 114 RDGVG-EALRAAGADRSSMLEAVRRVRGPAAVVDAEPERTYLGVRWRPPAVSSQVLRYSR 172 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +L +LA +DP++GR+ E+ER IQVL RRRKNNP+L+G+ GVGKTAIAEGLA RIV G Sbjct: 173 DLTELAFRAELDPVVGRDAEIERVIQVLSRRRKNNPVLIGDPGVGKTAIAEGLAQRIVAG 232 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGA 293 DVP + + + +LD+G+L+AG YRG+FE R K+LLK + D I+FIDE+HTI+GA Sbjct: 233 DVPAALLNRRVIALDVGALVAGATYRGEFEDRVKSLLKDVVGADGGIIVFIDELHTIVGA 292 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 GAA G VDA NL+KP+L+ G+ R +G+TT E+ E D AL RRFQ + + EPS Sbjct: 293 GAAEGA-VDAGNLLKPMLARGEFRTLGATTLDEYRKHVESDGALERRFQPVRVDEPSSAN 351 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 ++++ GL+ +YE+HH V T A+ AAV L+ +YI DR LPDKAID+IDEA +R R+ Sbjct: 352 ALEMLRGLRSRYESHHGVAITDAALSAAVSLSDRYIADRFLPDKAIDLIDEACSRRRIQS 411 Query: 414 VSKR----------KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 S V+ DI +V + IP + + + + L ++ RL V GQ Sbjct: 412 DSLSSVTRGAGSCTPPLVDDDDIARLVGQWTGIPVSRLQEEELERLVHMEHRLAERVVGQ 471 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFD 520 KA+ ++ A++ +R GL ++P+ S +F GP GVGKT + L+ + G L++ D Sbjct: 472 AKAVVGVSAALRNSRTGLSDPNRPIASLMFCGPLGVGKTYLARVLADVMLDSGEALVQLD 531 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MS+Y E+H+V+RL+GA PGYVG+++GG LTDAV + P+ V+LLD+IE+AHPDV +L QV Sbjct: 532 MSDYAEKHSVTRLVGASPGYVGYEEGGQLTDAVRRRPYCVVLLDDIEQAHPDVHGLLRQV 591 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEF 640 +D+G+LTD GR FR+V+LVMT++ + + + F EF Sbjct: 592 IDDGSLTDGQGRVVSFRHVILVMTSSLPD-------------------LGAVNQHFRAEF 632 Query: 641 RNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMG 700 RLD+++ F L + Q+VD + + +L +G++LE++ EAR +AE G D G Sbjct: 633 LTRLDDVLEFAPLRRKDLEQLVDIQVRSVAARLSDRGIALELTHEARALIAELGDDSRQG 692 Query: 701 ARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 ARP+ RV+Q L ++ +L G G + V + LT + A+ Sbjct: 693 ARPLVRVVQKELISAVSRSILLGDACPGDTIRVDQEGTSVTLTVLSRPAE 742 >UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular organisms RepID=A6X7G2_OCHA4 Length = 964 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 274/811 (33%), Positives = 427/811 (52%), Gaps = 81/811 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 L+++ L A +A E + EHLLLAL S+ + LE VD+ LR+++E Sbjct: 118 LSEQGNKLLQDAAQKAGEFGRSEVDTEHLLLALTSSDVVKTILEQFKVDVDDLRRQIEKE 177 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 ++ ++ + + + + L RA G + V ++L+ + E E AA Sbjct: 178 AKRG-----DAKTDGEIGVSPRLKDALNRAFIASNELGHSYVGPEHLLIGLAEEGEGLAA 232 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 +LRK ++ + ++ K G++ E ++ F+ +L +LAR Sbjct: 233 AMLRKLGLTPQALRQQVTKVVGK---------GAEEGRVETPSNTPDLDQFSRDLTKLAR 283 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G +DP+IGR +E+E I+VL RR+KNNP+L+GE GVGKTAI EGLA RIV G+VPE + Sbjct: 284 EGKLDPVIGRAREIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPEALR 343 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTII-GAGAASGG 299 D + L+I S++AG+KYRG+FE+R + +LK++ ++ +S ILFIDE+HTI+ G Sbjct: 344 DKRLVELNINSMVAGSKYRGEFEERVQKILKEITEEKDSLILFIDEMHTIVGAGQGGGEG 403 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D AN KP L+ G++ +IG+TT E+ EKD AL RRFQ + + EP++ +T+ I+ Sbjct: 404 GLDIANTFKPALARGELNLIGATTLNEYQKYIEKDAALERRFQPVYVDEPTVAQTIMILR 463 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ E+HH V T +A+ AA EL+ +YI R +PDKAID+ID+A AR ++ ++ Sbjct: 464 GLRDTLESHHKVTITDEAIIAAAELSDRYITGRFMPDKAIDLIDQAAARVKISATARPVD 523 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIE----------- 468 + + + R LK ++ + + + + Sbjct: 524 VQELEAEVAQIKREQDYAAARKQFDRAAELKKELEQKQKELDELLEIWKRDQASATAEVR 583 Query: 469 ----------------------------ALTEAIKMARAGLGHEHKPVG----------- 489 L E + G + V Sbjct: 584 ADHVAQIVSKITGVPVTELTTEEKDKLLKLEEKLHERVIGQEEAIRAVADAVRLARAGLR 643 Query: 490 -------SFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPG 539 +FLF GPTGVGKTE+ L++ + + ++R DMSEY ERH+V+RL+GAPPG Sbjct: 644 EGRGPTATFLFLGPTGVGKTELAKTLAEVIFGDQDAIIRIDMSEYGERHSVARLVGAPPG 703 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+D+GG LT+ V + P++V+LLDEIEKAHPDV+NILLQV D+G LTD GR DF N Sbjct: 704 YVGYDEGGQLTEKVRRRPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNT 763 Query: 600 VLVMTTNAGVRETERK-----SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 +++ T+N G +R S ++ ME ++ F PEF NR+D II F L+ Sbjct: 764 IIIATSNLGSDIIQRNLTKRGSSEFDEAKQKSELMEVLRGHFRPEFINRIDEIIVFHSLN 823 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 I Q+V+ + ++ +GV LE+ + G+ GAR + R+I+ L+ Sbjct: 824 QSEIRQIVELQLNRVKRTALTQGVELELDVSVVDHFGAVGFRPEFGARELRRLIRSQLET 883 Query: 715 PLANELLFGSLVDGGQVTVALDKEKNELTYG 745 LA E+L G + DG +V VA +++ + + Sbjct: 884 ELAREMLSGRIEDGDKVRVAWSEDEQRVVFE 914 >UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular organisms RepID=ERD1_ARATH Length = 945 Score = 621 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 291/842 (34%), Positives = 438/842 (52%), Gaps = 103/842 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQEL--- 58 + ++ + A+ + + +HLLL L++ + + + R+ + Sbjct: 83 FTERAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIAEDRDPQGFLGSGITIDKAREAVWSI 142 Query: 59 ----EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFS 114 + +Q + + D ++S +RV + AV + ++ + ++ V +F+ Sbjct: 143 WDEANSDSKQEEASSTSYSKSTDMPFSISTKRVFEAAVEYSRTMDCQYIAPEHIAVGLFT 202 Query: 115 EQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGS--------------QPNSE 160 + A +L++ + + + + +P S + Sbjct: 203 VDDGSAGRVLKRLGANMNLLTAAALTRLKGEIAKDGREPSSSSKGSFESPPSGRIAGSGP 262 Query: 161 EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 + +E F +L A G IDP+IGREKE++R IQ+LCRR KNNP+L+GE+GVGK Sbjct: 263 GGKKAKNVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILLGEAGVGK 322 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 280 TAIAEGLA I + P + I SLDIG L+AG K RG+ E R AL+ ++++ Sbjct: 323 TAIAEGLAISIAEASAPGFLLTKRIMSLDIGLLMAGAKERGELEARVTALISEVKKSGKV 382 Query: 281 ILFIDEIHTIIGAG----AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 ILFIDE+HT+IG+G G +D ANL+KP L G+++ I STT EF + FEKD+A Sbjct: 383 ILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGELQCIASTTLDEFRSQFEKDKA 442 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 LARRFQ + I EPS E+ V+I+ GL+ KYEAHH+ +YT +A+ AAV L+ +YI DR LPD Sbjct: 443 LARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIADRFLPD 502 Query: 397 KAIDVIDEAGARARLMPVSKRK----------KTVNVADIESVVARIARIPEKSVSQSDR 446 KAID+IDEAG+RAR+ K+K +I++V A + Q D Sbjct: 503 KAIDLIDEAGSRARIEAFRKKKEDAICILSKPPNDYWQEIKTVQAMHEVVLSSRQKQDDG 562 Query: 447 DTLKNLGDRLKML-------------VFGQDK--AIEAL--------------------- 470 D + + L + G D A+ ++ Sbjct: 563 DAISDESGELVEESSLPPAAGDDEPILVGPDDIAAVASVWSGIPVQQITADERMLLMSLE 622 Query: 471 -------------TEAIKMA----RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 AI A R GL +P+ + LF GPTGVGKTE+T L+ Sbjct: 623 DQLRGRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYF 682 Query: 514 I---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH 570 +LR DMSEYMERHTVS+LIG+PPGYVGF++GG+LT+A+ + P V+L DEIEKAH Sbjct: 683 GSEESMLRLDMSEYMERHTVSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAH 742 Query: 571 PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER---KSIGLIHQDNSTD 627 PD+FNILLQ+ ++G LTD+ GR+ F+N +++MT+N G + SIG I D+ Sbjct: 743 PDIFNILLQLFEDGHLTDSQGRRVSFKNALIIMTSNVGSLAIAKGRHGSIGFILDDDEEA 802 Query: 628 ---------AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV 678 +EE+K F PE NR+D I+ F L + ++++ + +L+ +L GV Sbjct: 803 ASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGV 862 Query: 679 SLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 LEVS+ + + ++GYD A GARP+ R + + ++ PL+ L GS G V LD Sbjct: 863 GLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDDT 922 Query: 739 KN 740 N Sbjct: 923 GN 924 >UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain, putative n=2 Tax=Theileria RepID=Q4U8P5_THEAN Length = 916 Score = 621 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 252/819 (30%), Positives = 425/819 (51%), Gaps = 82/819 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELE 59 + L ++ A+ + H+ L L+ A + L+ V + + R + Sbjct: 74 FSDNAIKVLMLSLEEAKLSNQPSVESAHIFQGLVCLNQGLAFKILKEFGVTVNSARNAAK 133 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + PV + + + + S + L + + G + + ++L+ + ++ + Sbjct: 134 S----SYPVDESKKVKNLPTFSNSAKNALDYSSTEAERLGNSTIETEHLLLGVLNDTTKE 189 Query: 120 AAYLLRKHEVS----------RLDVVNFISHGTRKDEPTQSSDPGS---QPNSEEQAGGE 166 + + ++ ++ + I E Q S P P + Sbjct: 190 MSTFYKNLDLDVTLAIDTTVRTIEKIKEIKESNSLSENIQESSPNFVYLSPTMNRDELAQ 249 Query: 167 ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 + FT +L + AR G + +I R+ E+ERAI L R K+NPLLVGE GVGKTAI EG Sbjct: 250 SCISLFTVDLTEKARNGQLPKVIHRDNEIERAIITLSRMTKSNPLLVGEPGVGKTAIVEG 309 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDE 286 +A +I QG ++ I L G L+AGTK+RG FE+R L+ +++ + IL IDE Sbjct: 310 IANKISQGISQPQISKKRILQLQFGLLIAGTKFRGQFEERLTKLIDEIKSSGDIILVIDE 369 Query: 287 IHTIIG----------AGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 H +IG A G +DAANL+KP LS G+I+ I TT +E+ FEKD A Sbjct: 370 AHMLIGMKFIYNNNKLGAGAGDGSIDAANLLKPPLSRGEIQCIAITTPKEYKKYFEKDMA 429 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L+RRF I + EPS E+T++I+NG+ Y H V YT ++++ A++ + +YINDR LPD Sbjct: 430 LSRRFHPIYVDEPSEEDTLKILNGISSSYGEFHGVEYTQESIKLALKYSKQYINDRFLPD 489 Query: 397 KAIDVIDEAGARARLMPVSKRKKT------------------------------------ 420 KAID++DE+G+ A++ ++ K+ Sbjct: 490 KAIDIMDESGSFAKIQYQNELKREKNELTSATETEGNGETESNPENEVEQVVEKKEQNVL 549 Query: 421 --VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V + V++ IP K +++ + + ++N+ + L +V GQ++A++ + +AI+ A+ Sbjct: 550 GQVKPEHVAEVMSIWTGIPLKKLTRGEMEIIRNMEEDLHKMVIGQEEAVKNVCKAIRRAK 609 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG--IELLRFDMSEYMERHTVSRLIGA 536 + + ++P+GSFLF GP GVGK+EV L+K L L+R DMSEY E H++SR++G+ Sbjct: 610 TNIKNPNRPIGSFLFCGPPGVGKSEVARALTKYLFAKENLIRIDMSEYTEPHSISRILGS 669 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGY G D GG LT+ V +P++V++ DEIEKAH DV NILLQ++++G LTD+ + F Sbjct: 670 PPGYKGHDTGGQLTEKVKSNPYSVVMFDEIEKAHHDVLNILLQILEDGKLTDSKNQTISF 729 Query: 597 RNVVLVMTTNAGVRETERKSIGLIHQDNSTD-------------AMEEIKKIFTPEFRNR 643 +N +++MT+N G +R S G+ + D MEE+K F PE NR Sbjct: 730 KNTIIIMTSNTGSNVIQRSSKGVHTFGFTVDSDESSDYLKIKALVMEELKSHFLPELINR 789 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 +D++I F LS + ++ + +L + + G+ +E+S++ +++ + D GARP Sbjct: 790 IDDVILFKPLSESELKEIAKLMLNDLTARANSAGILIEISEKFADYILKLPRDDKSGARP 849 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 + R+I L+ LA+ ++ TV +D+ + + Sbjct: 850 LRRLITSVLEDKLADLVISDDFDSNNTYTVTVDEADSVV 888 >UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding subunit n=25 Tax=Bacteria RepID=CLPC_CHLMU Length = 870 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 259/811 (31%), Positives = 415/811 (51%), Gaps = 94/811 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + +A A+ H ++ EH+LL LL A L VD + E+E Sbjct: 21 FTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAKNEVE 80 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + D T ++ + A N V ++L+ I ++ + Sbjct: 81 RLIGYGPEIQVYG----DPALTGRVKKSFESANEEASILEHNYVGTEHLLLGILNQADGV 136 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEE------------------ 161 A +L + ++ I P + Sbjct: 137 ALQVLENLHIDPKEIRKEILKELETFNLQLPPSSSITPRNTNSSSSSSSKSSSLGGHSLG 196 Query: 162 --QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 + ++ + +L ++ + +DP+IGR E+ER I +LCRRRKNNP+L+GE+GVG Sbjct: 197 GDKPEKLSALKAYGYDLTEMFKEARLDPVIGRSAEVERLILILCRRRKNNPVLIGEAGVG 256 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN 279 KTAI EGLA +IV G+VPE + + +LD+ ++AGTKYRG FE+R KA++ ++ + N Sbjct: 257 KTAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGN 316 Query: 280 SILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 +LFIDE+HTI+GAGAA G +DA++++KP L+ G+I+ IG+TT E+ EKD AL R Sbjct: 317 ILLFIDELHTIVGAGAAEGA-IDASHILKPALARGEIQCIGATTLDEYRKHIEKDAALER 375 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 399 RFQKI + PS++ETV+I+ GLK KYE HH+V T +A+ AA +L+ +Y++ R LPDKAI Sbjct: 376 RFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAAAKLSDQYVHGRFLPDKAI 435 Query: 400 DVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 D++DEAGAR R+ + + + + + + + +L++ +L+ Sbjct: 436 DLLDEAGARVRVNTMGQPSELLRLEAEIESTKQAKEQAIGTQEYEKAASLRDEEKKLREK 495 Query: 460 ----------------VFGQDKAIEALT-------------------------------- 471 V ++A+ + Sbjct: 496 LSNMKQQWESNKEEHQVPVDEEAVAQVVSVQTGIPAARLTEAESEKLLMLENTLQKKVIG 555 Query: 472 ---------EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRF 519 AI+ +R G+ ++P+GSFLF GPTGVGKT + Q++ + L++ Sbjct: 556 QDQAVASICRAIRRSRTGIKDPNRPMGSFLFLGPTGVGKTLLAQQIAVEMFGGEDSLIQV 615 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DMSEYME+ ++++G+PPGYVG ++GG LT+ V + P+ V+L DEIEKAHPD+ +++LQ Sbjct: 616 DMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDLMLQ 675 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER-KSIGLI------HQDNSTDAMEEI 632 +++ G LTD+ GRK DFRN +++MT+N G + IG + + Sbjct: 676 ILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKTGEIGFGLRSHMDYGVIKEKIDAAV 735 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAE 692 KK PEF NRLD + F L + + +++ I +L +L ++L + ++L + Sbjct: 736 KKHLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNHQMALNIPDSVVSFLVD 795 Query: 693 KGYDRAMGARPMARVIQDNLKKPLANELLFG 723 KG+ MGARP+ RV++ L+ PLA LL Sbjct: 796 KGHSPEMGARPLRRVVEQYLEDPLAEMLLKE 826 >UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae RepID=Q6ETV8_ORYSJ Length = 822 Score = 617 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 245/614 (39%), Positives = 364/614 (59%), Gaps = 27/614 (4%) Query: 162 QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 E + + ++ A DP+IGR+ E++R + +LCRR KN+ +LVG GVGKT Sbjct: 174 APPKETALRTYGRDMTGSAAAA--DPVIGRDDEVDRVVCILCRRTKNSAVLVGAPGVGKT 231 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNS 280 AIAEGLA R+ GDVP +A + LD+GSL+AGT+YRG FE+R K ++++ E Sbjct: 232 AIAEGLARRVAAGDVPAALAGARVVELDVGSLVAGTQYRGMFEERVKKVIQEAEGAAGKV 291 Query: 281 ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR 340 ILFIDE+H ++GAGA GG +D ANL+KP L+ G+IR +G+TT+ E+ E+D A RR Sbjct: 292 ILFIDEMHMLLGAGACKGGSMDGANLLKPALARGRIRCVGATTFDEYRKHIERDAAFERR 351 Query: 341 FQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 FQK+ + EP+ + T+ I+ GLK +YE HH ++ A+ AA +LA +YI R PDKAID Sbjct: 352 FQKVIVEEPTTQATIAILQGLKQRYEEHHGLKIQDAAIVAAAQLADRYITGRQFPDKAID 411 Query: 401 VIDEAGARARLMPVSKR--------------------KKTVNVADIESVVARIARIPEKS 440 +IDEA + RL S++ + V + VV+R IP + Sbjct: 412 LIDEACSTVRLKIDSQKGVNTTGMQNNNGNTSVNGVNEAIVGPDHVAQVVSRWTGIPVTT 471 Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 + Q +++ L +L DRL V GQD+A++ + +A+ +RAGL +P+GSFLF G TGVG Sbjct: 472 LDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLRSRAGLEQPGQPIGSFLFLGSTGVG 531 Query: 501 KTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 KTE+ L++ L L+RFDMSE++ +V RLIGAPP Y G GG LT+ V P Sbjct: 532 KTELAKALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAPPSYHGHQDGGQLTEKVRTRP 591 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI 617 ++V+L DE+EKA P VFN+ LQ++D+G LTD GR DF+N +++MT+N G Sbjct: 592 YSVILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFKNTIIIMTSNLGAEHLTEGVT 651 Query: 618 GLIHQDNSTD-AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK 676 G + + D M++++K F PE NRL I+ F+ LS D + +VV + + + K Sbjct: 652 GERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHDNLKEVVKIQMKSVVTSVAHK 711 Query: 677 GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 GVSL S +A + + + Y+ GARP+ R +Q N+ L+ L+ G G +++ Sbjct: 712 GVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKLSEMLITGDAGQGSTISIDAT 771 Query: 737 KEKNELTYGFQSAQ 750 +K L + + Sbjct: 772 DDKKGLNFQVLKEE 785 >UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma subunit (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRH2_THAPS Length = 782 Score = 616 bits (1589), Expect = e-175, Method: Composition-based stats. Identities = 268/783 (34%), Positives = 418/783 (53%), Gaps = 46/783 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL-----SNPSAREALEACSVDLVALRQ 56 L+ +++ + + + E LL+ ++ + AR+ L + + + Sbjct: 10 LSDGCIKAISFSQDASHNLGVSTLENEMLLVGMVRSAGADDIEARKILTSFGISPDGSLK 69 Query: 57 ELEAFIEQT----TPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAI 112 E + + + E + S ++ L AV G V +VL+A+ Sbjct: 70 AAETVLIKRGVADINNSKSGEGLPPLPFSDSVKKTLSEAVSIADRMGSGAVLPGHVLLAV 129 Query: 113 FSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENF 172 + + + + L V+ + + + G ++ Sbjct: 130 LEYDDRYSVATEDAEKCAGLAVLQKTAESSPVTLIVVGGNEG---------MSTPTLDKV 180 Query: 173 TTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 +L ++AR G +D + GRE E+ ++ L RRRK+NP L+GE+GVGKTAIAEG+A + Sbjct: 181 GIDLTEMAREGRLDAVYGRENEIRMCLRTLGRRRKSNPCLIGEAGVGKTAIAEGVAQCLA 240 Query: 233 QG-----DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEI 287 + P + + S+D+ SL+AG K+RGDFE+R + L+K+ T +ILFIDE+ Sbjct: 241 ESLPPLPPCPRALQGFRVVSVDMASLVAGMKFRGDFEERIQNLIKEA-SSTPTILFIDEL 299 Query: 288 HTIIGAGAASGGQ-VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 HT+IGAG G + AANL+KP L+ G+IRVIG+TT E+ EKD AL RRFQ I + Sbjct: 300 HTLIGAGGGGGDGGMSAANLMKPALARGEIRVIGATTISEYRQYIEKDGALERRFQPILV 359 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EP+++E ++I+ + P+YE H VRYT A+ AAV LA +YINDR LPDKAID++DEAG Sbjct: 360 NEPTVDEAIEILTAVTPRYEEFHGVRYTPFAIDAAVRLAERYINDRFLPDKAIDLLDEAG 419 Query: 407 ARARLMPVSKRKKT------VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 + +L + V ++ +VV+ I+ IP + + ++ L L + V Sbjct: 420 SMVKLADDGEEDDLPDDFFVVTDDNVATVVSEISGIPVGKLDRDEKAKLMRLEADIAKRV 479 Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELL 517 GQD A+ ++ AI+ AR+GL + KPV +FLF GPTGVGKTE+ L++ +++ Sbjct: 480 KGQDPAVNSVARAIRRARSGLRDQTKPVATFLFCGPTGVGKTELCKALAQTYYGREKDII 539 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 R DMSEYMER +VSRL+GAPPGYVG+D+GG LT+A+ + PH+V+L DE+EKAH DV N+L Sbjct: 540 RIDMSEYMERFSVSRLVGAPPGYVGYDEGGQLTEAIRRKPHSVVLFDELEKAHEDVLNVL 599 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH---------QDNSTDA 628 LQ++D G+LTD GR F+N + VMT+N G +E + S G Sbjct: 600 LQILDEGSLTDGKGRTVSFKNCIFVMTSNIGSQEILKLSRGENPTAEAGSSAGMTMEGAV 659 Query: 629 MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD-QKGVSLEVSQEAR 687 E++K PEF NR+D I+ F L DV+ + + E + ++ +++ +Q Sbjct: 660 KNELEKKMKPEFLNRIDEIVVFKPLEDDVLISIAMNILDETMKRAASEQDMAVTCTQSLM 719 Query: 688 NWLAEKG--YDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 +A +G GARPM R + L+ L+ ++ L +G +V V + E + Sbjct: 720 ATVANEGAFSAAQFGARPMRRAAKRFLEDTLSEAIMREFLSEGDEVIVDMANESEARGFT 779 Query: 746 FQS 748 S Sbjct: 780 GDS 782 >UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria RepID=A0K1M3_ARTS2 Length = 857 Score = 616 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 286/807 (35%), Positives = 433/807 (53%), Gaps = 75/807 (9%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L++ L++A A + H + H+L + A + D A+ + E Sbjct: 40 LLSRRTHEVLSLAGQFAVDLGHGDVDALHILRTMAGAEPATSYMRRAGADPAAVARAAEE 99 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + + S T S QR L A ++ G + ++ A+ Q++ A Sbjct: 100 RLPEKSGRAATSA----PALTPSAQRALLDAYQVARAFGSTYIDPEHLFFALVLNQDAPA 155 Query: 121 AYLLRKHEVSRLDVVNFISHGTR-KDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 +L V+ + + + D + + A ++ + T+L L Sbjct: 156 GQVLAAAGVTPESFQAGARETSGTEPSGAGAPDAAASASGTGTAAATPMLDTYGTDLTAL 215 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR GG+DP+IGR E + I+VL RR KNNP+L+GE+GVGKTAI EGLA I G VPE Sbjct: 216 ARSGGLDPVIGRSDETAQTIEVLARRTKNNPVLIGEAGVGKTAIVEGLAQAIAAGTVPEQ 275 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASG 298 + + + SLD+ ++LAGT+YRGDFE+R + ++ + ILFIDE+HT+IGAG A Sbjct: 276 LRNKRVISLDLPAMLAGTRYRGDFEERLTKAMDEVTANPGQFILFIDELHTVIGAGGAGE 335 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA N++KP L+ G++ V+G+TT+ E+ + EKD A RRFQ + + EP++E+ VQI+ Sbjct: 336 GGMDAGNILKPRLARGELHVVGATTFNEYRKV-EKDPAFERRFQPVQVGEPAVEDAVQIL 394 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 +GL+ +YE HH VRYT +AVRAAVEL+ +Y+ DR LPDKAID++D+AGAR L S++ Sbjct: 395 SGLRERYEEHHGVRYTDEAVRAAVELSARYVTDRFLPDKAIDLMDQAGARLSLKLGSRQD 454 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM---------------LVFGQ 463 + ++ ++ + V G+ Sbjct: 455 AAALRERLVALEESKTAAIAAEDFEAASRLRDEANALKEKLDGGAASQEGPGSESAVVGE 514 Query: 464 DKAIEALTEA----------------------------------------IKMARAGLGH 483 + E ++ A ++ R G+G Sbjct: 515 AEIAEIISRATGIPASRITEGDRERLARLEEDLHQRVVGQEDAVSLIAKSVRRNRTGMGA 574 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGY 540 +P+GSFLF GPTGVGKTE+ L+ +L ++RFDMSE+ ERHTVSRL+GAPPGY Sbjct: 575 AGRPIGSFLFLGPTGVGKTELAKALAGSLFGSEDSMIRFDMSEFGERHTVSRLVGAPPGY 634 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+D+ G LT+ V ++P++++LLDE+EKAHPDVFN+LLQV+D+G LTD +GR DFRN V Sbjct: 635 VGYDEAGQLTERVRRNPYSIVLLDEVEKAHPDVFNLLLQVLDDGRLTDGHGRTVDFRNTV 694 Query: 601 LVMTTNAGVRETERKS--IGLIHQDN--------STDAMEEIKKIFTPEFRNRLDNIIWF 650 ++MT+N G K+ G + + +++ PEF NR+D I+ F Sbjct: 695 VIMTSNLGSEFLASKAGPTGFTAAGDAFGSEKALRDRVLARLRESMRPEFLNRIDEIVLF 754 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L + Q+V + E +L +G+ L VS++A +W+AE+GY+ GARPM RVIQ Sbjct: 755 RKLDRAQLRQIVRLMLDETDARLRSQGIGLVVSEDAVDWIAERGYEPEYGARPMRRVIQR 814 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDK 737 L +A+ L+ L GGQVTV+ D Sbjct: 815 ELDDRIADLLVGSGLAAGGQVTVSADG 841 >UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AYE5_HERA2 Length = 776 Score = 616 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 274/768 (35%), Positives = 423/768 (55%), Gaps = 42/768 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 LN ++ + +A AR H F+ EHLLL LL A + L V RQ ++ Sbjct: 8 LNPNIQHIMLLAQEEARSLNHSFLGPEHLLLGLLRQKEGLAVQILHELGVFYPQTRQIIQ 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + +L A + ++ +L+A+ E + Sbjct: 68 TMITPHARDEQTLLPAY-LPLAPHTKTLLDTAAREADQLNQQQIGPEQLLLALAREAKGF 126 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 Y+L + + V + + + + + A + NL + Sbjct: 127 VPYILARLGLHGSIVCDSLHAALQ---------AKATEVAPAHAADTSLLAKLGINLTEE 177 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGR E+ER IQ+L RR KNN +L+GE GVGKTAI EGLA ++ G +P Sbjct: 178 ARNGRLDPVIGRSAEIERTIQILRRRTKNNVVLIGEPGVGKTAIVEGLAQQLAHGAIPSF 237 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 +++SLD+GSLLAG YRG FE+R K+++ Q+ D ++ILFIDE+H I+GAGA+ Sbjct: 238 QK-TSVWSLDVGSLLAGAIYRGQFEERLKSVIDQI-SDHDAILFIDELHMIVGAGASE-N 294 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 VDAAN++KP L+ GK+RVIG+TT+ E+S EKD AL RRFQ I + EP IEETV I+ Sbjct: 295 TVDAANMLKPALARGKLRVIGATTFDEYSQHIEKDSALKRRFQPIVVQEPGIEETVTILQ 354 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA---------- 409 G++PKYEAHH++ + +A+ A LA +YI D +LP KAID++DEA +R Sbjct: 355 GIRPKYEAHHELSLSDEALYTAARLAAQYIPDLYLPGKAIDLLDEAASRVWYYRQRQLVA 414 Query: 410 --RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 V D+ V+A IP + + ++++ L V GQ +AI Sbjct: 415 HDAASSAEAPTTVVCGRDVAQVLAIQTGIPLAQLFSDGLNRIEDIEQILSQRVIGQAQAI 474 Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEY 524 +T+AI+ A AGL + +G+ LF GP+GVGKTE++ L++ L L+R DMSEY Sbjct: 475 RGVTKAIQRAFAGLKTKQDLIGALLFLGPSGVGKTELSKVLAEYLLGSNKALIRMDMSEY 534 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 E H+VSRLIGAPPGY+G+DQGG L+++V + P++V+LLD I+ AHPDV NI +Q+++ G Sbjct: 535 AEAHSVSRLIGAPPGYIGYDQGGQLSESVRRRPYSVVLLDNIDYAHPDVINIFIQILEEG 594 Query: 585 TLTDNNGRKADFRNVVLVMTTNAGVRETERKS-IGL-----------IHQDNSTDAMEEI 632 ++TD GR DFRNV+L+ T N G +R++ +G ++ A+++I Sbjct: 595 SITDARGRYVDFRNVLLLCTANVGTELFKRQTGLGFRAELPEIDQVARYEHLKQQALDKI 654 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAE 692 K + +F +RL+++I F L + + + F+ +++ + + L+++ A +L + Sbjct: 655 KTSLSLDFLHRLNDVILFQPLQAEHLEVLAGLFLQDVRQMVLAHEIRLDLTSNAHTYLTD 714 Query: 693 KGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 GYD G R + +IQ ++ P++N LL G G ++ + D N Sbjct: 715 HGYDLERGVRRLRHLIQTHIVDPISNGLLHGKYRAGDELLIDCDLSGN 762 >UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Treponema RepID=B2S3E1_TREPS Length = 814 Score = 614 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 288/822 (35%), Positives = 431/822 (52%), Gaps = 81/822 (9%) Query: 2 LNQELELSL-NMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQEL 58 L+ L + ARE R + EH+LLAL+ + + +E D+ +R L Sbjct: 5 LSANARKVLLELGQTVAREARASLLQPEHILLALIQHKVGRGYKLIEKLIEDVATVRLIL 64 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E + + + +D + + +L A +S + ++++A E+++ Sbjct: 65 EQHVLTNEGDVAS---PQDLPVSGRVKHLLDIAAMEARSLRCAYIGTEHLVIAFAREEQN 121 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 L + +S D+ N SS + + ++ + T+L + Sbjct: 122 PLFQSLIREGLSLDDLRNA---------SIISSPHSDTTRTRLERKVASVLDEYGTDLTE 172 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR G ++P+IGR KE+ R IQ+LCRR KNNP+L+GE GVGKT+I EGLA+ IV+ +VP Sbjct: 173 RARAGALNPVIGRNKEITRVIQILCRRGKNNPVLIGEPGVGKTSIVEGLAYAIVREEVPH 232 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 ++ + SLD+ +++AGTKYRG FE+R K ++K++E+ ILFIDE+HT+IGAG Sbjct: 233 ILLHTRVVSLDLAAVIAGTKYRGQFEERLKRIIKEVEETEKVILFIDELHTLIGAGGT-Q 291 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DAAN++KP L+ G+I+ IG+TT E+ FEKD AL RRF+ + + EPS EET I+ Sbjct: 292 GSLDAANMLKPALARGQIQCIGATTLAEYRRYFEKDAALTRRFRSVLVREPSFEETCTIL 351 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP----- 413 +K YE HH V Y + A+ VEL+ +YI +R PDKAID++DE GA R+ Sbjct: 352 RKIKSHYERHHQVIYQSDALEKIVELSRRYIPERFFPDKAIDLMDEVGAMKRVQQRADTQ 411 Query: 414 -------------------VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD 454 ++ + VV R+ V S R+ L + Sbjct: 412 VLRSFSIKVANLTTETERAIALEDWARARSLHTDVVQLRRRLHALKVEWSAREALSIFAE 471 Query: 455 RLKMLV------------------------------FGQDKAIEALTEAIKMARAGLGHE 484 + V GQ +AI L AI AR G+ + Sbjct: 472 DVAQAVSLMTDIPVHSLEGDELCRFTNIERDLCATVRGQREAIATLARAIVRARVGISSD 531 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYV 541 +P+GSFLF GPTGVGKT + L++ L L+R DMS+YMER+ SRL+GAPPGYV Sbjct: 532 TRPIGSFLFLGPTGVGKTLLAKTLAEFLFGSADALIRIDMSDYMERYNTSRLMGAPPGYV 591 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 GF+ GGLLT+ V P +V+LLDEIEKAHPDVFN+LLQV++ G L DN G +FRN ++ Sbjct: 592 GFENGGLLTERVRHRPFSVILLDEIEKAHPDVFNVLLQVLEEGELQDNLGHTVNFRNTII 651 Query: 602 VMTTNAGVRETERKSIGLIHQDNST--------DAMEEIKKIFTPEFRNRLDNIIWFDHL 653 +MT+NAG R G A+ EIK+IF+PEF NR+D + F L Sbjct: 652 IMTSNAGTRGLGENVPGFQTARARNIEYRQLRVQALREIKRIFSPEFLNRVDECVVFAPL 711 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + ++++ + +L +L K + L S A+ + E G+D +GARP+ RV+Q ++ Sbjct: 712 ERETLQEILECELKKLAERLRGKDIVLRYSAAAKAYCLEHGFDPFLGARPLRRVLQQEIE 771 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAE 755 LA ++ G+L G V + D + L+ H E Sbjct: 772 NELALRMIHGTLRAGSCVHIDSDGARLHLSTEKSYLTLHPQE 813 >UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5LIJ2_9ALVE Length = 895 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 283/760 (37%), Positives = 419/760 (55%), Gaps = 50/760 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 L+ +++ A + +E LL+ L S A + L V + L+ Sbjct: 150 LSDSSARAIHRAQEE--SMNLATVPLEGLLIGLASERSGGASKLLREAGVQVAELK---H 204 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 Q P L + V++ V Q +T +L E Sbjct: 205 LAPLQAAPDLVSWGAVERVPLDDEVVEVIRGCVDKAQGP----ITTEALL-------EGV 253 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQP--NSEEQAGGEERMENFTTNLN 177 +L + +++ + ++ + D P G +E+ NL Sbjct: 254 IGKMLARPAGMEPELMGRLQSVLQRLQEWGEEDAEKIPVGGFVPGTSGGSVLESCGRNLT 313 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 LAR G + +GR+ E+ R IQVL R KNNP+L+GE GVGKTA+AEG+A I +G+VP Sbjct: 314 ALAREGKLLKCVGRDAEIGRMIQVLSRMTKNNPVLLGEPGVGKTAVAEGMAELIARGEVP 373 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAA 296 +A I+ + IGSLLAGTKYRG+FE+R K L+K+ D IL IDE+HTI+GAGA Sbjct: 374 THLAGVAIWDVSIGSLLAGTKYRGEFEERLKRLVKEATDADGKIILLIDELHTIVGAGAT 433 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 G +DAAN++KP LS G++RVIG+TT E+ KD AL RRFQ + + EP+ + V Sbjct: 434 GDGAIDAANILKPALSRGELRVIGATTQSEYDKYIAKDPALERRFQPVVVPEPTQAQAVD 493 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 ++ G+ YE HH VR+T A+ A V+L+ +YI R LPD A D +DEA AR R+ ++ Sbjct: 494 MLMGVASLYEEHHFVRFTDDAIEACVKLSSRYIPSRRLPDSAFDAMDEAAARKRIQQGAR 553 Query: 417 R--KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 + VN D+ VA+ IP + +++ + L ++ +RL V GQ +A A+ AI Sbjct: 554 PSSRIEVNANDVAQTVAQWTGIPLEELTKDESARLLHMEERLDSRVIGQKRATSAVARAI 613 Query: 475 KMARAGLG--HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI----ELLRFDMSEYMERH 528 + AR G+ +P FLF GPTGVGKTE++ LS ++R DMSE+MERH Sbjct: 614 RRARVGVRGIGNKRPTACFLFCGPTGVGKTELSKALSDEYFGEEGRNMIRLDMSEFMERH 673 Query: 529 TVSRLIGAPPGYVGFD--QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTL 586 +VS+LIG+PPGYVG+D GG+LTD V + PH+++L+DE+EKAHPDV NILLQVMD+G L Sbjct: 674 SVSKLIGSPPGYVGYDSNSGGVLTDRVRRQPHSLVLIDEVEKAHPDVLNILLQVMDDGRL 733 Query: 587 TDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDN 646 TD++GR ADF NV+LVMT+N G ME++K+ F PEF NR+D Sbjct: 734 TDSHGRLADFSNVILVMTSNVGSS------------------MEDLKRHFRPEFINRIDE 775 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKG-VSLEVSQEARNWLAEKGYDRAMGARPMA 705 +I FD L+ + I ++V ++ LQ L ++ + L+V+ L ++GY GAR + Sbjct: 776 VIAFDSLTEEDIVRIVGLYVSRLQAALKEQHSIDLKVTDGLTAALGKEGYSAEFGARHLN 835 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 RV+Q ++ P+A +L + G ++ D E++ + + Sbjct: 836 RVMQARIEDPIAELILREEIHRGEELIADYDSERDMIVFR 875 >UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit ClpC n=34 Tax=Bacteroidetes RepID=B2RGN2_PORG3 Length = 859 Score = 611 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 296/852 (34%), Positives = 455/852 (53%), Gaps = 118/852 (13%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 Q SL ++ A +T + L+L ++ + A + + ++L L++ +E Sbjct: 5 FTQTFRNSLEYSYQEATRLGVVAVTQDMLVLGIIRDGDNGAIDIMRHYGINLYELKRLIE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE-QES 118 +E LPAS E T S + + A V+ ++L++I + QES Sbjct: 65 --LEAIAESLPASPEGLPI-FTPSAREAIDDATDICADMEDEAVSPVHLLLSILNSTQES 121 Query: 119 QAAYLLRKHEVSRLDVVNF----------------------------------------- 137 + K + +++ Sbjct: 122 LVQKIFMKQGIKYDTILSDYFGQRNPSEGKSPSEMEILDGYQDNDFDDEEDESSPPSGNS 181 Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 + G D P Q++ G + G ++ F T++ +A G +DP++GRE+E+ER Sbjct: 182 GTGGGSGDAPEQNTGGGDTTTTTRSGGDTPALDTFGTDITAMAAAGKLDPVVGREQEIER 241 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 IQ+L RR+KNNP+L+GE GVGK+AI EGLA RIV V ++ D I SLD+ ++AGT Sbjct: 242 VIQILSRRKKNNPVLIGEPGVGKSAIVEGLAERIVNRKVSRILFDKRIISLDLAQMVAGT 301 Query: 258 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 KYRG FE+R KA+L +L+++ ILFIDEIHTI+GAG+A+ G +D AN++KP L+ G+++ Sbjct: 302 KYRGQFEERLKAVLDELKKNPQIILFIDEIHTIVGAGSAA-GSMDTANMLKPALARGQVQ 360 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 IG+TT E+ EKD AL RRFQK+ I + EET+ I+ +K KYE +H VRYT +A Sbjct: 361 CIGATTLDEYRKNIEKDGALERRFQKVPIAPSTAEETLTILQNIKEKYEDYHGVRYTDEA 420 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARA------------------------RLMP 413 ++AAVEL +Y++DR PDKAID +DEAGA +L Sbjct: 421 IKAAVELTDRYVSDRFFPDKAIDAMDEAGASVHITNVVAPKEIEILEAELASVRENKLSA 480 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRD-------------------------- 447 V + + + + +I E+ ++ Sbjct: 481 VKAQNYELAASFRDQERRTQQQIAEEKKKWEEQMSKHRETVDENVVAHVVALMTGVPAER 540 Query: 448 -------TLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 L+ + D LK V GQD AIE + AI+ R GL +E KP+GSFLF GPTGVG Sbjct: 541 LSTGEGERLRTMADDLKTKVVGQDTAIEKMVRAIQRNRLGLRNEKKPIGSFLFLGPTGVG 600 Query: 501 KTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 KT + +L++ L + ++R DMSEYME+ +VSRL+GAPPGYVG+++GG LT+ V + P Sbjct: 601 KTYLAKKLAEYLFEDENAMIRVDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTERVRRKP 660 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI 617 ++V+LLDEIEKAH DVFN+LLQVMD G LTD+ GR+ +F+N V+++T+N G R+ + Sbjct: 661 YSVVLLDEIEKAHADVFNLLLQVMDEGQLTDSLGRRVNFKNTVIIITSNVGTRQLKDFGQ 720 Query: 618 GLIHQDNSTD----------AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 G+ + + + + K F+PEF NRLD+II FD L I ++VD + Sbjct: 721 GIGFRSEKDEEANKEHSRSVIQKALNKTFSPEFLNRLDDIILFDQLGKTEIRRMVDIELK 780 Query: 668 ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVD 727 + ++ + G L ++ EA++ +A KGYD GARP+ R +Q+ ++ L + +L G + Sbjct: 781 AVLARIHRAGYDLVLTDEAKDVIATKGYDLQYGARPLKRTLQNEVEDRLTDLILSGQIEK 840 Query: 728 GGQVTVALDKEK 739 G +T++ + Sbjct: 841 GQTLTLSARDGE 852 >UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6K4_9BACT Length = 826 Score = 611 bits (1574), Expect = e-173, Method: Composition-based stats. Identities = 272/798 (34%), Positives = 415/798 (52%), Gaps = 75/798 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + +L +A A + R + + HLLL + + + A LEA V LR+ L Sbjct: 6 FSDSCKRALQIAHREALKMRSKEIGTAHLLLGIAAEGTSSAAGLLEANGVTAEGLRRTL- 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + +P +E+ D + + L A+ +S V + +L A+ ++ Sbjct: 65 ----KIDETIPEPDEQTDLPFSDGARGCLDAALNSARSLDAELVDPSCLLAAVLKVNDNG 120 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNS-EEQAGGEERMENFTTNLNQ 178 A LL VS + + + +S + + E + F +L Sbjct: 121 ACRLLATLGVSPETLRERAAELLASSKREESPVHSPKAGNGEGDEAELAIIGQFCVDLTA 180 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A G +DP++GR+KE R +QVLCRR KNNP+LVG+ GVGKTA+ EGLA I VP+ Sbjct: 181 RAAAGELDPIVGRQKETRRLMQVLCRRTKNNPVLVGDPGVGKTAVVEGLAQLIQSEMVPD 240 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + I L++GSL+AG KYRGDFE+RF+ L+ Q + + ILFIDEIHT+IG G A Sbjct: 241 PLKGKKILQLNVGSLVAGAKYRGDFEERFQKLIAQASKSKD-ILFIDEIHTLIGTGNAE- 298 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DAAN++KP L+ G++R+IG+TT E+ E+D AL RRFQ IDI EP + V I+ Sbjct: 299 GSLDAANMLKPSLARGELRIIGATTAAEYRRYIERDGALERRFQPIDIAEPDFDSAVAIV 358 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 +GL P+YE HH V Y +A AV L+ +++ DR LPDKAID+IDEAGA+A+L Sbjct: 359 SGLLPRYEEHHGVVYAPEAAETAVRLSSRFLTDRRLPDKAIDLIDEAGAKAQLDRSDWPP 418 Query: 419 KTVNV----------------------------------ADIESVVARIARIPEKSVSQS 444 + V +E ++ R S S+ Sbjct: 419 ELKEVKTRLGQLRRDKEAAILAADFELAGRFRSDEAETAQQLEENLSVWRRGRRMSGSRV 478 Query: 445 DRDTLKNLGDRLKMLVFGQD-----------------------KAIEALTEAIKMARAGL 481 D L + + GQ +A+ + A++ R+GL Sbjct: 479 GPDDLAQVLSSWCGVPVGQMSQSEAERLLTLESRVEKHLIGQSEAVSCVCRALRRNRSGL 538 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPP 538 E +P+GSFLF GP+GVGKTE+ +++ L L+ DMSE+ +R+TVSRLIG P Sbjct: 539 QDEKRPIGSFLFLGPSGVGKTELARVVARELYGSDKALIALDMSEFHDRYTVSRLIGTGP 598 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG++ G LT+AV +HP++V+LLDEIEKA P V ILLQ+M++G LTD +G DFRN Sbjct: 599 GYVGYEDRGQLTEAVRRHPYSVVLLDEIEKADPQVNRILLQIMEDGRLTDGHGDTVDFRN 658 Query: 599 VVLVMTTNAGVRETERKSIGLIHQDNSTD-----AMEEIKKIFTPEFRNRLDNIIWFDHL 653 +++MT+N G RE + G S +E+K+ F PE R+D++++F L Sbjct: 659 ALIIMTSNLGSREAAKSPFGFSDAGRSDQAARGVMSDELKRFFPPELLGRMDDVVYFRQL 718 Query: 654 STDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + + ++ D + +L ++G+ VS + + + ++ + GARP+ R+++ + Sbjct: 719 NAEDLSKIFDLLLAPAVQRLKRRGIDFSVSPQLKLAILDEAARQGAGARPLRRLVEKRVS 778 Query: 714 KPLANELLFGSLVDGGQV 731 P A L+ G V Sbjct: 779 DPTAEWLIANPGASGELV 796 >UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas RepID=C1EC57_9CHLO Length = 1033 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 261/842 (30%), Positives = 423/842 (50%), Gaps = 100/842 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + ++ +A A+ R + VEH+++ L++ + + V + + R++ + Sbjct: 109 FTERAIKAVMLAQQEAKALRRPEVGVEHIVMGLVAEEAKKGGWLGTGVTIDSAREKAKEI 168 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + + + +RV + A+ + + G N + ++ +A+ + Sbjct: 169 VSFDKDRAARRTSTSEVPFSRGAKRVFEAALNNSTNMGMNYIAPEHIALAVAELDDESLV 228 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSS---------DPGSQPNSEEQAGGEERMENF 172 SR V N + ++ +S P + Q + + +F Sbjct: 229 KYFEMLSTSRTFVKNEAERRLKTEKEKESGPAARPNTSLAPRQRQQQASQKDEKSPLNDF 288 Query: 173 TTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 +L Q AR IDP+IGR++E+ER IQ+L RR KNNP+L+GE GVGKTAIAEGLA RIV Sbjct: 289 CFDLTQRARDEKIDPIIGRDEEVERVIQILARRSKNNPILLGEPGVGKTAIAEGLALRIV 348 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII- 291 G+VPE + + + SLD+G L+AG K RG+ E R L+K+++ + +L IDE+HT+I Sbjct: 349 SGNVPEFLREKRVLSLDVGLLMAGAKERGELESRVTGLIKEIQDKKDVVLMIDEVHTLIG 408 Query: 292 --GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 G GG +D +N++KP L+ G+++ IG+TT E EKD AL RRFQ + + EP Sbjct: 409 AGAVGKGGGGGMDISNMLKPPLARGELQCIGATTVDEHRKYIEKDAALERRFQPVMVEEP 468 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 S E+ ++I+ GL+ +YEAHH T A+ AAV+++ +YI DR LPDKAID++DEAG+ A Sbjct: 469 SEEDAIEILFGLRERYEAHHMCEITDDALIAAVQISSRYIADRFLPDKAIDLVDEAGSAA 528 Query: 410 RLMP------------VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 R+ + + + + V+ + + + L++ +K Sbjct: 529 RIKQYMAQKERRGEVDKATSMEAMEMWRALKQVSEAKEAAVRGLLFEEATLLRDREREVK 588 Query: 458 MLV----------------------FGQDKAIEALTEAIKMARAGLGH------------ 483 + + +A+ A+ I + R L Sbjct: 589 TNLSKLGVKVDELTGDGAYGGAKVTVDEIEAVAAMWSGIPVQRMTLDEQAILANMDQDLQ 648 Query: 484 --------------------------EHKPVGSFLFAGPTGVGKTEVTVQLSKALG---I 514 ++P+ S LFAGPTGVGKTE+T +L++ Sbjct: 649 GSVIGQEEAVSAVSRSLRRTRCGLKDPNRPIASMLFAGPTGVGKTELTKRLAEKYFGSED 708 Query: 515 ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVF 574 ++R DMSEYMERH+VS+L+GAPPGYVGF QGG LT+AV + P +LL DEIEKAHPDVF Sbjct: 709 NMVRLDMSEYMERHSVSKLVGAPPGYVGFGQGGTLTEAVRRKPFTILLFDEIEKAHPDVF 768 Query: 575 NILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI-------------GLIH 621 NILLQ+M++G LTD+ GR F+N ++V+T+N G + + + Sbjct: 769 NILLQMMEDGRLTDSQGRVVSFKNCLIVLTSNVGSKVIAKGGGGLGFQLQDDDEEGSAEY 828 Query: 622 QDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLE 681 + ++E+K F PE NRLD I+ F L + + ++ + E ++ KG+ + Sbjct: 829 KRIREKVLDELKNFFRPEMLNRLDEIVCFKQLEKESVQRIARLMLRETAGRMRLKGMEMA 888 Query: 682 VSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNE 741 ++ A + L E G+D+ GARP+ R I + L+ +L G + +G + D+ ++ Sbjct: 889 LTASAMDKLLETGFDKEYGARPLRRAITSIIDDNLSEAMLRGVIHEGDVAVIDYDRSSDQ 948 Query: 742 LT 743 Sbjct: 949 FE 950 >UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Neorickettsia RepID=C6V4H7_NEORI Length = 740 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 283/733 (38%), Positives = 433/733 (59%), Gaps = 10/733 (1%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 M++ LE +L A AR H ++T+EHLLLAL + S++ LR L Sbjct: 1 MISPSLENTLQNALVLARSFSHSYVTLEHLLLALTEDEEVSRIASNSSMNFAKLRDSLIH 60 Query: 61 FIEQTTPVLPASEEERDT---QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQE 117 F+ S D +PTL +RV+QR H + ++TG +VL+ +F EQ+ Sbjct: 61 FLSTAQFFARFSNGCVDIAKIKPTLGLRRVIQRTKIHANIAELGQITGLHVLIELFCEQD 120 Query: 118 SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 S A L + ++ +V +SH R + + + ++ + ++ + T++N Sbjct: 121 SYAFSFLTESNIT---LVELMSHVMRSHKCGSTQSTSTSNTDILRSADLDNLKEYCTDMN 177 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 +LA G ID LI R+KE+ER I++L RR KNNP+ VGE GVGKTAI EGL IV G+VP Sbjct: 178 ELAIQGKIDKLIDRKKEIERTIEILLRRTKNNPIYVGEPGVGKTAIVEGLVHAIVSGNVP 237 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + + + +Y+L IGSLLAGT+YRGDFE+R + ++ ++ N+ILFIDEIHTI+GAG+ S Sbjct: 238 QKLKNTRVYALKIGSLLAGTRYRGDFEERIRTVMNEISSSKNTILFIDEIHTIVGAGSTS 297 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DA NL+KP L+ G +R IG+TTY+E+S FEKD AL RRFQ+I+I EPSI +T+ I Sbjct: 298 NGSIDAGNLLKPFLTKGPLRCIGATTYREYSTHFEKDAALDRRFQRIEIEEPSISDTLNI 357 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP---V 414 I+G K YE H V YT ++ V LA +YI +R PDKAID++D+ GA Sbjct: 358 IDGTKSYYEDFHRVHYTKASLNEIVNLAHRYIPNRSFPDKAIDLMDDLGASYNAELFDVK 417 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 +R + +++ + +A+ IP ++ + + L +L LK +F QD IE + ++ Sbjct: 418 KRRDRKIDIKYVRETLAKRFNIPVAQLNYTVEEILTSLERNLKTAIFDQDNVIEQVVYSL 477 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 534 + GL KP+ S+LF G TGVGKTE+ Q++K L ++ +R DMSEYME H VSRLI Sbjct: 478 RPGLLGLK-GEKPLASYLFGGSTGVGKTELAKQIAKNLCMQFVRIDMSEYMEGHAVSRLI 536 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG D+G + + + K +++L DEIEKAH D NILLQ++D G +TD+ G+K+ Sbjct: 537 GAPPGYVGHDKGSFIAEILFKQGSSLILFDEIEKAHADFQNILLQILDYGCITDSTGKKS 596 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 F+N ++V TTN G E S+G T + F E +RLD I F+ L Sbjct: 597 RFKNCIMVCTTNVGSTFIENNSLGFTQDGKKTGKEAQFASFFNKELLDRLDLAIVFNTLD 656 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + + ++++K E++ L+++G+ L ++ E L + + AR + R I++++ + Sbjct: 657 KNSVEKIINKSATEIRALLEERGIKLSLTDEVVKSLVARHSSGKISARTIERTIRNDIMQ 716 Query: 715 PLANELLFGSLVD 727 +++ +L + Sbjct: 717 AVSDRMLRSKTSE 729 >UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372BC Length = 750 Score = 608 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 250/752 (33%), Positives = 401/752 (53%), Gaps = 22/752 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + A A A + H F+ EHLLL++ + A + L + L+ + Sbjct: 6 FAKRSVKIIEGAVAIASQMGHTFVGSEHLLLSIAKEGNSAAADILIDNGLTYDDLQSAVV 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + TP +S T S +R+L+ A R + T N+L A+ ++ Sbjct: 66 RMIGKGTPSTLSSR-----YFTASVKRILENAASGGTIPKRRQATPENILSAVINDTSCT 120 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A L+ + + R D D + + + + ++ Sbjct: 121 ARKLIVSAGGDIRGICESLDVNFRLD------DDELYSSCAPKRSQFPHLFRYGRHITDS 174 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 DPLIGRE E+++ + L RR K+NP L+GE+GVGKTAI +G+A + GDVPE Sbjct: 175 NVQAKRDPLIGREAEVQQVLMTLSRRTKSNPCLIGEAGVGKTAIVDGVAGLFISGDVPEA 234 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + I++LD+ +L++G KYRGDFE+R + +++ N ILFIDEIHTI+GAGAA G Sbjct: 235 LRNKYIFALDLTALISGAKYRGDFEERLRGCIEEASSSGNIILFIDEIHTIVGAGAAEGA 294 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ +++VIG+TT+ E+ EKD+AL RRFQ + + EPS+ E V++I Sbjct: 295 -IDAANIMKPQLARSELQVIGATTFDEYRKTIEKDKALERRFQPVTVNEPSVGECVEMIK 353 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G++ YE +H+V + +A +V + ++INDR LPDKAID +DEA A A + +K Sbjct: 354 GIRTAYEKYHNVIISDEAAEFSVRTSARFINDRFLPDKAIDTLDEACAAAAIRNRENCRK 413 Query: 420 TVNVA-DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 DI V++ IPE S++ + L + G I + EA+ + Sbjct: 414 YEISCGDIAHVISLKTGIPESSITAFSDCRAAGIEKLLTRRITGHRDIIRKVAEAVYRSD 473 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIG 535 +GL +P SFLFAGPTGVGKTE+ L++A +R DMSE+ME+ ++++LIG Sbjct: 474 SGLKDSRRPAASFLFAGPTGVGKTELAKALAEAAFGSSGSFIRIDMSEFMEKSSITKLIG 533 Query: 536 APPGYVGFDQGGL-LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 APPGY G+ +G L + V +HP++++L DEIEKA +V N+LLQ++D G +TD+ K Sbjct: 534 APPGYAGYSEGRSNLCEQVRRHPYSLVLFDEIEKADTEVLNLLLQILDEGVITDSEMHKI 593 Query: 595 DFRNVVLVMTTNAGVRETERKS---IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 FR+ ++MT+N G S G + + + I++ F+PEF NR+D I F Sbjct: 594 SFRSCFIIMTSNIGADLVTGNSSMGFGSSAETVNERVTDRIRQYFSPEFINRIDEIAVFG 653 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L++ + + + +L+ + G+++E S++ + GARP+ R I D Sbjct: 654 KLNSCDLLGITRNLLSDLKRRSQSIGITVEYSEKTVEIFSRTKDTDRYGARPIRRRITDM 713 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 ++ LA ++ + G V V + +T Sbjct: 714 IENKLAQMIVNREVAKGDSVRVDTSNGEIMIT 745 Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%) Query: 79 QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFI 138 + ++++ AV G V ++L++I E S AA +L + ++ D+ + + Sbjct: 5 KFAKRSVKIIEGAVAIASQMGHTFVGSEHLLLSIAKEGNSAAADILIDNGLTYDDLQSAV 64 Query: 139 SHGTRKDEPT 148 K P+ Sbjct: 65 VRMIGKGTPS 74 >UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Clostridiales RepID=UPI0001973947 Length = 801 Score = 606 bits (1563), Expect = e-172, Method: Composition-based stats. Identities = 330/803 (41%), Positives = 475/803 (59%), Gaps = 55/803 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +++E+ + A A E E++T E LL + P REA E C D L+ +LEA+ Sbjct: 4 IDEEVARVFSGAVKEAGERGLEYVTPELFLLKIADEPMFREAFEECGGDCGELKSKLEAY 63 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 I + +PAS+ +++ P+ +L Q+ G+ + +++ A + + S A Sbjct: 64 IREQ---VPASDGKKEPVPSADLNELLFYTELTTQNCGKRSIDLNHLIAAYYHLENSFAL 120 Query: 122 YLLRKHEVSRLDVV-NFISHGTRKDEPTQSSDPGSQPNSEEQ------------------ 162 Y L + + + +++ I G + + + + ++ E+ Sbjct: 121 YYLMEQGIEKAELLLELIESGEKWEGEYEEYEVHEGGDNSEEWEEYYAREYELEKRREEL 180 Query: 163 -------------------------AGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 E+ ++ T LN + PLIGRE ELER Sbjct: 181 MRGGGKRTEGKNDDGGEEDIPFGSTEKKREKWRDYVTCLNDSLSD--VSPLIGREDELER 238 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 +Q+LCRR KNNPL +GE GVGKTAIA GLA + + VPE + IYSLD+G+++AGT Sbjct: 239 TMQILCRREKNNPLHIGEPGVGKTAIAYGLARLLEEEKVPEALKGARIYSLDLGAMIAGT 298 Query: 258 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 +YRG+FEKR K++L LE++ I+++DEIH I+GAGA G DA+NL+KP L++G+IR Sbjct: 299 QYRGEFEKRLKSVLAGLEREEKPIVYLDEIHNIVGAGAVGEGSFDASNLLKPYLAAGRIR 358 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 IG+TT++E+ FEK ++L RRFQ I+I+EP EETV+I+ GL+ YE +H V Y Sbjct: 359 FIGATTHEEYKKHFEKSKSLVRRFQNIEISEPGEEETVKILEGLRKHYEKYHGVSYKKGV 418 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 + AV ++ +YIN+R LPDKAID+IDEAGA +L P+ ++K+TV I+ ++++ RIP Sbjct: 419 MEYAVHMSARYINERFLPDKAIDLIDEAGAYRKLHPLPQKKQTVGKEVIDEILSKTCRIP 478 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 +K V + L L RL VFGQD+AI+ + AIK +RAGL KP+ SFLF GPT Sbjct: 479 KKVVESGEIKKLAGLERRLSACVFGQDEAIKEVVNAIKFSRAGLSEAGKPLASFLFVGPT 538 Query: 498 GVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 GVGKTE+ L+ LGI L+RFDMSEY E+H V++LIGAP GYVG+++GGLLT+AV K+P Sbjct: 539 GVGKTEIARSLASELGIRLIRFDMSEYEEKHAVAKLIGAPAGYVGYEEGGLLTEAVRKNP 598 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI 617 HAVLLLDEIEKAH D++NILLQVMD TLTDN GRKADFRN+VL+MT+NAG + + Sbjct: 599 HAVLLLDEIEKAHSDIYNILLQVMDYATLTDNQGRKADFRNIVLIMTSNAGASRLTKARL 658 Query: 618 GLIHQDNSTD----AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL 673 G + M+E+ ++F PEFRNRL I+ FD + ++ K + EL L Sbjct: 659 GFGDGAGADGRGSVIMDEVNRVFQPEFRNRLSRIVVFDGIDERTAREIAGKKLRELGALL 718 Query: 674 DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 ++ V +++A L +KG R GAR + RVI+ +K LA+ LLFGSL GG Sbjct: 719 SERQVEFSFTRQAEALLTKKGVSREYGARELTRVIEREIKPLLADRLLFGSLKRGGF--C 776 Query: 734 ALDKEKNELTYGFQSAQKHKAEA 756 LD + ++ K K E Sbjct: 777 RLDVKDGAFVLSDEAGAKEKREE 799 >UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bacteroidales RepID=B0MVC3_9BACT Length = 819 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 291/763 (38%), Positives = 424/763 (55%), Gaps = 84/763 (11%) Query: 54 LRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIF 113 LR E E + EE T QR+ V+ A+ L+ I Sbjct: 63 LRIESEIRSVSAPDSSRQNPEEFFPLYTRELQRLFAPMH---------HVSTAHALLHIV 113 Query: 114 SEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPN------------SEE 161 S+ + + +L + + + T + + T D +P + Sbjct: 114 SDPHTITSQVLAMYHFDAQAIATELQKMTLEADQTTPPDTNFRPTPELRFIGLREPVRDT 173 Query: 162 QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 ++ F T+L AR G IDP++GRE+E+ER +Q+L RR+KNNP+L+GE+GVGK+ Sbjct: 174 PPAEPALLDKFGTDLTYEARRGRIDPVVGREREMERIVQILSRRKKNNPILIGEAGVGKS 233 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI 281 AI EGLA R+ +VP + +YSLD+ SLLAGTKYRG+FE+R + LL++L + +SI Sbjct: 234 AIVEGLALRMAADEVPATIRGKRLYSLDVSSLLAGTKYRGEFEERMQRLLEELRRKQDSI 293 Query: 282 LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 LFIDEIHTI GAG+ G +D AN++KP L+ G+++VIG+TT E+ E D AL RRF Sbjct: 294 LFIDEIHTIAGAGST-QGSLDTANILKPALARGELQVIGATTLDEYREDIESDPALERRF 352 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 QKI + S EET+QI++ + P YE HH VRY+ +A+RA V L +YI DR+ PDKAIDV Sbjct: 353 QKILVEPASEEETLQILHNIAPHYERHHGVRYSDEALRACVALTGRYITDRNFPDKAIDV 412 Query: 402 IDEAGARARLM------------------------------------------------- 412 +DEAGAR L Sbjct: 413 LDEAGARIHLQDKGKTEKPSRKTASREPVGAAAGAKTPKNRSRKTAAADTTTVGGAVWTL 472 Query: 413 PVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTE 472 P + IE V+ + IP + +S S+ + L+ L D L V GQ +A+E ++ Sbjct: 473 PSDPGPPEIRAEHIEQVITSMTGIPAERLSGSESERLRGLADYLSARVIGQCEAVEKISR 532 Query: 473 AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHT 529 +I+ +RAGL E +P+G F+F GPTGVGKT + +LSK L E L+R DMSEY E+H Sbjct: 533 SIQRSRAGLKDEGRPIGVFMFVGPTGVGKTLLAKELSKWLFDENKGLIRIDMSEYSEKHN 592 Query: 530 VSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDN 589 V+RLIG+PPGYVG+ +GG LT+AV +HP++V+L DEIEKAHP+VFN LLQ+ D G LTD Sbjct: 593 VARLIGSPPGYVGYGEGGQLTEAVRRHPYSVVLFDEIEKAHPEVFNTLLQIFDEGHLTDG 652 Query: 590 NGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST----------DAMEEIKKIFTPE 639 +GRK DFRN V+++T+N G R +S + + S + +++ F PE Sbjct: 653 SGRKVDFRNTVIILTSNVGSRAAAIRSTQVGYSTCSKSDTQQKAPQSEYRRALEETFAPE 712 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAM 699 F NR+D+I+ F L + +++D + L + D+ G +E++ EA+ LA GY R Sbjct: 713 FLNRIDDIVIFRTLDLSDVERIIDLELKGLLSRTDRLGYKVEITDEAKRTLAAIGYQRKY 772 Query: 700 GARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 G R + R + + +++PL+ ++ G L G +V V D EK + Sbjct: 773 GVRALRRTLLERIEEPLSGLIIDGKLHSGERVIVEPDGEKEVI 815 >UniRef50_Q9ZN31 ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT n=17 Tax=Helicobacter RepID=Q9ZN31_HELPJ Length = 742 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 291/754 (38%), Positives = 464/754 (61%), Gaps = 21/754 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVD-LVALRQELEA 60 N++L L+ A A + H T EH+LLA+L + D + Q L+ Sbjct: 4 FNKDLNEVLSHALDLALDFNHVLCTTEHVLLAILEHGIGIRIFNTLEEDGYHKMEQILKD 63 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +++Q P+ ++ + + RV ++ +S + V +L+ I + A Sbjct: 64 YLQQYIPL--KNDPTKIPDRSPVLARVFKKMY----ASYLDSVGVEELLIFILEYDDCYA 117 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 + LL ++R + + ++ + E+A ++ +T NL+ LA Sbjct: 118 SKLLDSFGITRSYFKSALLDFDNPNDINDNDIN------NEEAPKSTPLKKYTKNLSALA 171 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + +DP+IGRE+E+ R I++L RR+KNNPLL+GE+GVGKT+IAE LA +I Q +VPE + Sbjct: 172 QNNALDPVIGREEEILRVIEILGRRKKNNPLLIGEAGVGKTSIAEALALKIAQKEVPEFL 231 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + +YSLD+ ++AG KYRGDFEKR K LK+++Q+ ILFIDEIHT++GAG+++ G Sbjct: 232 QEYEVYSLDLALMVAGAKYRGDFEKRLKKTLKEIQQNGRIILFIDEIHTLLGAGSSNAGS 291 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 +DAAN++KP+L+ G ++ +G+TT++E+ ++FEKD+A RRF +++ EPS E I+ Sbjct: 292 LDAANILKPVLTDGSLKCLGATTFEEYRSVFEKDKAFNRRFSIVNVEEPSKEACYLILKN 351 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 + P YE HH VRY +A V+L Y++D+ LPDKAI+++DE G+ R K+ K Sbjct: 352 IAPLYEEHHQVRYNESVFKACVDLTSYYMHDKFLPDKAIELLDEVGS--RKKINPKKGKK 409 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 ++V D++ +A +IP+ ++ + L+NL LK +F Q +AI ++ AIK+ G Sbjct: 410 ISVDDVQETLALKLKIPKMRLNSDKKALLRNLEKSLKNKIFAQTEAINLVSNAIKIQHCG 469 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 L ++KPVGSFLF GP+GVGKTE+ +L+ L + RFDMSEY E H+V++LIG+P GY Sbjct: 470 LSAKNKPVGSFLFVGPSGVGKTELAKELALNLNLHFERFDMSEYKEAHSVAKLIGSPSGY 529 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VGF+QGGLL +A+ KHPH +LLLDEIEKAHP+V+++LLQVMDN TL+DN G KA F++V+ Sbjct: 530 VGFEQGGLLVNAIKKHPHCLLLLDEIEKAHPNVYDLLLQVMDNATLSDNLGNKASFKHVI 589 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L+MT+N G ++ + ++G N+ +K++ TPE R+R+D I+ F+ LS + + Sbjct: 590 LIMTSNVGSKD--KDTLGFFSTKNAK-YDRAVKELLTPELRSRIDAIVPFNALSLEDFER 646 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +V + +L+ ++GV L+ +E +A+K Y +GAR + ++I + +K L++ L Sbjct: 647 IVSVELDKLKALALEQGVILKFHKEVVKCIAQKSYQTTLGAREIKKIIHNEIKTQLSDIL 706 Query: 721 LFGSLVDGGQVTVALDKEKNELTYG-FQSAQKHK 753 L S ++ L EKN+L + AQK K Sbjct: 707 LLQSFKKPCKIACLL--EKNQLVLKEIKRAQKVK 738 >UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Candida albicans RepID=C4YJT6_CANAL Length = 700 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 254/626 (40%), Positives = 391/626 (62%), Gaps = 17/626 (2%) Query: 149 QSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKN 208 S Q EQ +E F ++L QLA+ G +DP+IGR+ E+ R IQ+L RR KN Sbjct: 68 SSFPRKLQMQQTEQGDNRPALEKFGSDLTQLAKEGKLDPVIGRDHEIRRTIQILSRRTKN 127 Query: 209 NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFK 268 NP+L+G +G GKTA+ EGLA RI++G+VP+ M D I +LD+ +++G KYRGDFE + K Sbjct: 128 NPVLIGNAGTGKTAVMEGLAQRIIRGEVPDSMKDKQIITLDLAGIISGAKYRGDFESKLK 187 Query: 269 ALLKQL-EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEF 327 ++LK++ E++ N ILFIDE H ++G G A G +DA+NL+KP L+ GK+ + G+TT +E+ Sbjct: 188 SILKEVEEKNGNVILFIDEFHLLMGLGKAE-GSIDASNLLKPALARGKLSMCGATTIEEY 246 Query: 328 SNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK 387 EKD ALARRF + + EP++E+T+ I+ GLK +YE HH VR A+ A + + Sbjct: 247 RKYVEKDAALARRFSPVTVNEPTVEDTISILRGLKERYEVHHGVRIMDSALVTAALYSNR 306 Query: 388 YINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARI---PEKSVSQS 444 YI DR LPDKAID++DEA + RL S+ + + E +S Sbjct: 307 YITDRFLPDKAIDLVDEASSTLRLQHESRPDAIATLDRQIMTIEIELESLRKEEDQLSID 366 Query: 445 DRDTL-----KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGV 499 + L ++ L+ V GQD+AI+A+++A+++ RAGL E++P+ SF+F GPTG Sbjct: 367 RKHKLEKELELDMNILLRQSVVGQDEAIDAVSDAVRLQRAGLTSENRPIASFMFLGPTGT 426 Query: 500 GKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKH 556 GKTE+T L++ L + ++RFDMSE+ E+HT+SRLIG+PPGYVG+++ G LT+AV + Sbjct: 427 GKTELTKSLAQFLFNDKNAVVRFDMSEFQEKHTISRLIGSPPGYVGYEESGELTEAVRRK 486 Query: 557 PHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK- 615 P++V+L DE EKAHPD+ +LLQV+D G+LTD++G+K DF+N ++VMT+N G Sbjct: 487 PYSVVLFDEFEKAHPDLSKLLLQVLDEGSLTDSHGKKIDFKNTIIVMTSNIGQEILLADK 546 Query: 616 ---SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ 672 G I+ + + +E ++ + PEF NR+D+I+ F+ LS + +++D + E+ + Sbjct: 547 NTYEDGHINSEVKSQVLENLRHHYAPEFLNRIDDIVVFNRLSKTALKEILDIRLREIGDR 606 Query: 673 LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVT 732 L K + L+++ EA+ L + GYD GARP+ RV++ L PLA L+ G + + V Sbjct: 607 LVDKRIILQLTDEAKTLLCDMGYDPTYGARPLNRVLRKKLLDPLAMRLIKGQVQENETVK 666 Query: 733 VALDKEKNELTYGFQSAQKHKAEAAH 758 V + K + + E + Sbjct: 667 VEVKDHKIYVVPNHSEGTVIEKEEDY 692 >UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subunit n=67 Tax=Bacilli RepID=C5WHX6_STRDG Length = 763 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 251/642 (39%), Positives = 384/642 (59%), Gaps = 59/642 (9%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +E F N+ +AR G IDP+IGR+ E+ R I++L RR KNNP+L+GE GVGKTA+ EGLA Sbjct: 120 LEEFGINVTDIARHGDIDPVIGRDDEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLA 179 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 +IV G VP + + LD+ SL+ GT RG FE+R + L++++ Q + ILFIDEIH Sbjct: 180 QKIVDGTVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRKDVILFIDEIH 239 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 I+GAG+A G +DA N++KP L+ G+++++G+TT E+ I EKD AL RR Q + + E Sbjct: 240 EIVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYR-IIEKDAALERRMQPVKVDE 298 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 PS+EET+ I+ G++PKYE +H V+Y+ A+ AA L+ +YI DR LPDKAID++DEAG++ Sbjct: 299 PSVEETITILKGIQPKYEDYHHVKYSPAAIEAAAHLSNRYIQDRFLPDKAIDLLDEAGSK 358 Query: 409 ARL-------------------------------------------------MPVSKRKK 419 L + Sbjct: 359 MNLTLNFVDPKEIDKRLIEAENLKAQATRDEDYERAAYFRDQIAKYKEMQAQKVDEQDIP 418 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 + IE+++ + IP + + ++ L NL + LK V GQD A++ + +AI+ R Sbjct: 419 IITEKTIEAIIEQKTNIPVGDLKEKEQSQLVNLANDLKAHVIGQDDAVDKIAKAIRRNRV 478 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGA 536 GLG ++P+GSFLF GPTGVGKTE++ QL+ L ++RFDMSEYME+H V++L+GA Sbjct: 479 GLGTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVAKLVGA 538 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PPGYVG+++ G LT+ V ++P++++LLDE+EKAHPDV ++ LQV+D+G LTD GR F Sbjct: 539 PPGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSF 598 Query: 597 RNVVLVMTTNAG-VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 ++ +++MT+NAG + G + ++ + E+ F+PEF NR D II F LS Sbjct: 599 KDTIIIMTSNAGTGKSEASVGFGAAREGRTSSVLGELSNFFSPEFMNRFDGIIEFKALSK 658 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 D + +VD + ++ +L G+ L+V+Q+ + L + GYD MGARP+ R IQD ++ Sbjct: 659 DNLLHIVDLMLEDVNKRLSYNGIHLDVTQKVKEKLVDLGYDPKMGARPLRRTIQDYIEDA 718 Query: 716 LANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAA 757 + + L + + + ++A+K + A Sbjct: 719 ITDYYLEHPTEKDLRAIMTSNS-----NIMIKAAKKDETVTA 755 >UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XL03_ORYSJ Length = 877 Score = 587 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 258/811 (31%), Positives = 415/811 (51%), Gaps = 101/811 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + ++ + AR E + HLLL L++ + A V + R+ A Sbjct: 74 FTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDRSPLGFLASGVRVERAREACRAA 133 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + + D + + +RV + AV ++ G N ++ ++ + +F+ + Sbjct: 134 VGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNLNDPTTN 193 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDP------------------GSQPNSEEQA 163 +L+ V + + + +P + + Sbjct: 194 NVLKSLGVDSSQLAKQALTRVQGELAKDGREPVGLSSFKVREKFTPGGGKSAIVKYSNKN 253 Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 + + F +L A G IDP+IGR+ E+ER +Q++CRR KNNP+L+GE+GVGKTAI Sbjct: 254 KEKSALALFCLDLTMRASGGLIDPVIGRKDEIERVVQIICRRTKNNPILLGEAGVGKTAI 313 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ------- 276 AEGLA +I GDVP + I SLD+ L+AG K RG+ E R +L++++ + Sbjct: 314 AEGLAHKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKADPKLPF 373 Query: 277 ------------DTNSILFIDEIHTIIGAG----AASGGQVDAANLIKPLLSSGKIRVIG 320 + ILFIDE+HT+IG+G + G +D ANL+KP L+ G+++ I Sbjct: 374 LVFNLQRAPKFHAGDVILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIA 433 Query: 321 STTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRA 380 STT E F+KD+ALARRFQ + + EPS E+ V+I+ GL+ KYE +H +YT +++ A Sbjct: 434 STTLDEHRLHFDKDKALARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLESINA 493 Query: 381 AVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKS 440 AV L+ +YI DRHLPDKAID+IDEAG+RAR+ ++K E + +++ P++ Sbjct: 494 AVYLSARYIADRHLPDKAIDLIDEAGSRARMESFKRKK--------EEQCSILSKSPDEY 545 Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 + ++N+ + ALT +K + E + G Sbjct: 546 W--QEIRAVQNMHEV-------------ALTNKVKYSLNQNDQEDAVDIELV-----GED 585 Query: 501 KTEVTVQLSKALGIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPH 558 KT LS + + +R DMSEYMERH VS+LIG+PPGY+GF +GG LT+AV + P Sbjct: 586 KTSPASMLSTSTDKKSATVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPF 645 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETE--RKS 616 V+LLDEIEKAHPD+FNILLQ+ ++G LTD+ GR+ F+N ++VMT+N G ++S Sbjct: 646 TVVLLDEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISNGKRS 705 Query: 617 IGLIHQDNSTD---------AMEEIKKIFTPEFRNRLDNIIWFDHLST------------ 655 IG Q ++ + MEE+K F PE NR+D ++ F L Sbjct: 706 IGFQTQTDTEEKSYAAMKSLVMEELKAFFRPELLNRIDEVVVFHPLEKTQACCFYRYCTC 765 Query: 656 -------DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 + + +++ + E++ ++ G+ LEVS ++ +++ GYD++ GARP+ R + Sbjct: 766 ILPCTFVNTMLAILNIMLQEVKGRILALGIGLEVSDSMKDLISQHGYDKSYGARPLRRAV 825 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 ++ ++ +L G G + V D Sbjct: 826 TQLVEDVISEAILSGQFKPGDTIMVDTDATG 856 >UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71_CLOTH Length = 803 Score = 586 bits (1511), Expect = e-166, Method: Composition-based stats. Identities = 271/697 (38%), Positives = 403/697 (57%), Gaps = 64/697 (9%) Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 + T ++ ++ ++ ++ ++ ++ + TNL A Sbjct: 97 NKTMESMGFKSSKDETESDGKTDREVKDDKNNTRTKTQDKKMPKKKKYLDTYGTNLIVKA 156 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 + G ID +IGR +E+ER IQ+L RR KNNP+L+GE GVGKTAIAEGLA RIV DVP + Sbjct: 157 KEGKIDRVIGRNREIERVIQILNRRNKNNPVLIGEPGVGKTAIAEGLALRIVNRDVPVKL 216 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + +Y LD+ S++AGT++RG FE R K ++++ + N IL IDEIH I+GAG A G Sbjct: 217 FNAEVYVLDLTSIVAGTQFRGQFENRMKGIIEECKALGNIILVIDEIHNIMGAGEAEGA- 275 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 ++AAN++KP L+ G+I+VIG+TT E+ EKD AL RRFQ + + EPS+EET++I+ G Sbjct: 276 MNAANILKPALAKGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVDEPSVEETIEILRG 335 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV------ 414 +K YE++H V+ + + +RAAV L+ +YI DR LPDKAIDV+DEAG+RA + V Sbjct: 336 IKDYYESYHRVKISDEVIRAAVILSERYITDRFLPDKAIDVLDEAGSRANIKNVVLLEYE 395 Query: 415 -----------------------------------------------SKRKKTVNVADIE 427 + + V DI Sbjct: 396 ALKEELKKVQEEKENAVSADSIEDYQKAADLKVRECKLLQQIKELEQKSKDMELTVDDIA 455 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 V+ +IP + +++ + + L NL +RL V GQ +A++++ AI+ RA KP Sbjct: 456 YVIESWTKIPVQRLTEIEAEKLLNLEERLHKRVIGQHEAVKSVARAIRRNRADFKKRKKP 515 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 SF+F GPTGVGKTE+ L+ L L+R DMSEYME+HTVS+LIGAPPGYVG+D Sbjct: 516 -ASFIFVGPTGVGKTELVKALAVELFGSEEALIRLDMSEYMEKHTVSKLIGAPPGYVGYD 574 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 +GG LT+ V + P++V+LLDEIEKAHPDVFN+LLQ++D+G TD++GR F N VL+MT Sbjct: 575 EGGQLTEKVRRKPYSVILLDEIEKAHPDVFNMLLQILDDGRATDSHGRTVSFENTVLIMT 634 Query: 605 TNAGVRETERKSIGLIHQDN---STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 +NAG + SIG + + E +K+ F PEF NR+D II F+HL+ D + Q+ Sbjct: 635 SNAGTS-LKASSIGFANDNYIALENKVKEVLKETFRPEFLNRVDEIIVFNHLTKDELKQI 693 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 VD ++ +++ K ++++ R ++ EKGYD GARP+ R IQ ++ LA L Sbjct: 694 VDLMFKDVVEEVENKKMTVKFQDGVREFILEKGYDPKYGARPLRRTIQRYIEDELAEMYL 753 Query: 722 FGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 G L +G + V + + + + ++ Sbjct: 754 KGLLAEGCSIVVGV--RDGNIVFNVEKPAENAVVDTE 788 >UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GCV2_PHATR Length = 683 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 253/685 (36%), Positives = 387/685 (56%), Gaps = 29/685 (4%) Query: 79 QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKH----EVSRLDV 134 +R L +A G V +V +A+ E A L++ + V+ LDV Sbjct: 1 PFGKDLKRTLVQAGKLADQMGSTTVGSQHVFLALLEYSEGGWAVLVKMNVLDDTVTALDV 60 Query: 135 VNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKE 194 + + +G + +L Q A G +DP+ GR+ E Sbjct: 61 CESLLQNMADQPDQARREL---VTGAGGSGKMPTLTECGVDLTQQAEDGLLDPVYGRDDE 117 Query: 195 LERAIQVLCRRRKNNPLLVGES-GVGKTAIAEGLAWRIVQGDV-PEVMADCTIYSLDIGS 252 ++ L RRRKNN L+GE GVGKTAIAEG+A +V + P + ++SL++ + Sbjct: 118 TRACVRTLIRRRKNNVCLIGEPVGVGKTAIAEGVAQILVDEKLCPARLKGHRLFSLELSN 177 Query: 253 LLAGTKYRGDFEKRFKALLKQLE--QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPL 310 L+AGTKYRG+FE+R ++++K++ + +ILFIDEIH ++GAGAA GG +DAANL+KP Sbjct: 178 LVAGTKYRGEFEERLQSIIKEVTDPKAPPTILFIDEIHNLVGAGAAEGG-MDAANLLKPA 236 Query: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD 370 L+ G++++IG+TT E+ EKD AL RR Q + + EPS+ +T+ I+ ++ YE HH Sbjct: 237 LARGELQLIGATTIMEYRKYIEKDAALERRLQPVMVKEPSVVQTIDILQAVQSNYEKHHG 296 Query: 371 VRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR-KKTVNVADIESV 429 V YT+ A+ AA L+ +Y+ DR LPDKA+D++DEAGA A L + V + V Sbjct: 297 VTYTSAALNAAATLSDRYMTDRFLPDKALDLLDEAGAIAHLEEPDEDVTPEVTEHTVAMV 356 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 ++ + IP + + D L+ L + V GQ +AI + A++ AR+GL +PV Sbjct: 357 ISEWSGIPMGKLETQEMDRLQALEGEMGRRVKGQGRAIRGVARAVRRARSGLRDPRRPVA 416 Query: 490 SFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 SFLF GPTG GKTE+ L++ +++R DMSEYME+H+VSRL G PPGY+G+++G Sbjct: 417 SFLFCGPTGTGKTELCKTLAETYYGSEKDMIRIDMSEYMEKHSVSRLTGPPPGYIGYEEG 476 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G LT+AV + PH+V+LLDE+EKAH DV NILLQVM++G LTD GR +F+N +LVMT+N Sbjct: 477 GQLTEAVRRAPHSVVLLDELEKAHGDVLNILLQVMEDGMLTDGKGRTINFKNSILVMTSN 536 Query: 607 AGVRETERKSIGLIHQDNSTD----------AMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 G R + D EE+++ PE NR+D II F LST Sbjct: 537 VGSRRILEVARSGRDSIVQKDHYLYAELAQVVKEELEREMKPELLNRIDEIIVFSPLSTG 596 Query: 657 VIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNWLAEKGY--DRAMGARPMARVIQDNLK 713 + + + + ++ + L ++ + L++ + + +G GARPM R Q ++ Sbjct: 597 DLWMIAELIVAKISERALKEQKLELKIDRSVIERVMAEGSANADQFGARPMRRAAQRFVE 656 Query: 714 KPLANELLFGSLVDGGQVTVALDKE 738 L++ ++ G L +G TV+L + Sbjct: 657 DSLSDAIIQGFLQEGEGATVSLASK 681 >UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit clpE n=161 Tax=Bacilli RepID=CLPE_LACLM Length = 748 Score = 584 bits (1506), Expect = e-165, Method: Composition-based stats. Identities = 253/671 (37%), Positives = 403/671 (60%), Gaps = 56/671 (8%) Query: 139 SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERA 198 + + P + + +E F N+ + AR G IDP+IGR++E++R Sbjct: 77 AASNQTPPTQTGGRGPRGPQNPRAKQPKGMLEEFGINITESARRGEIDPVIGRDEEIKRV 136 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 I++L RR KNNP+L+GE GVGKTA+ EGLA +IV GDVP+ + + + LD+ SL+ GT Sbjct: 137 IEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTG 196 Query: 259 YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRV 318 RG FE+R + L+ ++ + + I+FIDEIH I+GAG+A G +DA N++KP L+ G++++ Sbjct: 197 IRGQFEERMQKLMDEIRKRNDVIMFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQL 256 Query: 319 IGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAV 378 +G+TT E+ I EKD AL RR Q + + EPS++ET+ I+ G++ +YE +H V+YT +A+ Sbjct: 257 VGATTLNEYR-IIEKDAALERRMQPVKVDEPSVDETITILRGIQARYEDYHHVKYTDEAI 315 Query: 379 RAAVELAVKYINDRHLPDKAIDVIDEAGARA----------------------------- 409 AA L+ +YI DR LPDKAID++DE+G++ Sbjct: 316 EAAAHLSNRYIQDRFLPDKAIDLLDESGSKKNLTLKFVDPEDINRRIADAESKKNEATKA 375 Query: 410 --------------------RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTL 449 + + + DIE +V + +IP + + ++ L Sbjct: 376 EDFEKAAHFRDQISKLRELQKQEVTDEDMPVITEKDIEQIVEQKTQIPVGDLKEKEQTQL 435 Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 NL D LK V GQD+A++ +++AI+ +R GLG ++P+GSFLF GPTGVGKTE+ QL+ Sbjct: 436 INLADDLKAHVIGQDEAVDKISKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLA 495 Query: 510 KALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI 566 K L ++RFDMSEYME+H+V++LIGAPPGYVG+++ G LT+ V ++P++++LLDEI Sbjct: 496 KELFGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEI 555 Query: 567 EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK-SIGLIHQDNS 625 EKAHPDV ++ LQ++++G LTD GR F++ +++MT+NAG + E G + + Sbjct: 556 EKAHPDVMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGTGKVEASVGFGAAREGRT 615 Query: 626 TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQE 685 + ++ F+PEF NR D II F LS + + ++VD + E+ Q+ + + L V+Q Sbjct: 616 KSVLGQLGDFFSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGRNDIHLSVTQA 675 Query: 686 ARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 A+ L + GY+ AMGARP+ R+IQ+N++ +A+ + + Q+ L +K ++ Sbjct: 676 AKEKLVDLGYNPAMGARPLRRIIQENIEDSIADFYIEHP--EYKQLVADLIDDKIVISNQ 733 Query: 746 FQSAQKHKAEA 756 Q + E Sbjct: 734 TQETAETTDEE 744 >UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=Q9KAV7_BACHD Length = 711 Score = 584 bits (1504), Expect = e-165, Method: Composition-based stats. Identities = 260/662 (39%), Positives = 402/662 (60%), Gaps = 56/662 (8%) Query: 135 VNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKE 194 +I + + S+ G ++ N+ A+ G IDP+IGR++E Sbjct: 53 KQWIGSTSSSMNGSDQPVSSIAMKSKTNHSGGGFLDQHGRNVTAEAKAGQIDPVIGRDQE 112 Query: 195 LERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 +ER IQ+LCRR KNNP+L+GE+GVGKTAI EG A RI +G+VP M + +Y L++ SL+ Sbjct: 113 VERLIQILCRRTKNNPVLIGEAGVGKTAIVEGFARRIAEGNVPAKMKNKEVYELELSSLV 172 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 AGT YRG FE++ + L+++LE + ILFIDEIH ++GAGA S G +DA N++KP L+ G Sbjct: 173 AGTSYRGQFEEKMEQLVRELEARDDVILFIDEIHMVVGAGATSEGSMDAGNILKPALARG 232 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT 374 ++++IG+TT E+ EKD AL RRFQ I + EP++E V+I+ G++P YEA+H V Y Sbjct: 233 QLQIIGATTLNEYRK-IEKDPALERRFQPITVKEPTLEAAVEILKGVRPIYEAYHHVSYP 291 Query: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA--------------------------- 407 + A V L+ +YI DR LPDKAID++DE G+ Sbjct: 292 DDVLEACVRLSDRYIQDRFLPDKAIDLMDEIGSALTLTSGPTTLDELKERLAEITKEKQQ 351 Query: 408 --------------------RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRD 447 ++ K V VADI+ ++ + IP + + ++++ Sbjct: 352 ATAQEDYERAAKLRDEENLLHKQMNENRAEKTEVTVADIQGLIEKRTGIPVRKLQKAEQT 411 Query: 448 TLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQ 507 +K+L +RL V GQ +A+E + +AIK +RAGL +++P+ SF+F GPTGVGKTE+T Sbjct: 412 KMKDLHNRLARQVIGQAEAVEKVAKAIKRSRAGLKPKNRPI-SFMFVGPTGVGKTELTKT 470 Query: 508 LSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLD 564 L++ L ++R DMSE+ME+H+VS+LIG+PPGYVG D+GG LT+ V + P++++LLD Sbjct: 471 LAQELFGSKEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHDEGGQLTEQVRRKPYSIILLD 530 Query: 565 EIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN--AGVRETERKSIGLIHQ 622 EIEKAHPDV ++ LQ++++G LTD+ GR F++ V++MT+N GV++ + Sbjct: 531 EIEKAHPDVQHMFLQILEDGRLTDSQGRAVSFKDTVIIMTSNAGVGVKKITVGFEKNVET 590 Query: 623 DNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV 682 N +E+I + F PEF NRLD II F+HL+ + ++VD + +L +L ++ +SL V Sbjct: 591 QNKAGILEQINQYFKPEFLNRLDAIIEFNHLTEQDLMRIVDLMLQDLGDRLAEQDISLTV 650 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 S++A+ L + G DRA GARP+ R IQD+++ + +L+ + + V D + Sbjct: 651 SEKAKAQLVKIGSDRAFGARPLRRAIQDHVEDSITEKLIDEESI--NAIHVDYDVVQQSF 708 Query: 743 TY 744 T+ Sbjct: 709 TF 710 >UniRef50_A7I2C9 ATP-dependent CLP protease ATP-binding subunit n=3 Tax=Campylobacter RepID=A7I2C9_CAMHC Length = 729 Score = 583 bits (1503), Expect = e-165, Method: Composition-based stats. Identities = 279/741 (37%), Positives = 436/741 (58%), Gaps = 26/741 (3%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVL 69 AR++R+ ++T H+L + +E ++ ++ I Q Sbjct: 10 FKNGVRVARKYRNNYLTTYHILFSFFRYDVFKEFFYYYG-----MQNDVGETIRQIIENF 64 Query: 70 PASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIF---SEQESQAAYL-LR 125 P S+ ++ + T + ++ + + G N+ ++ +F E+ Sbjct: 65 PKSKNKK-LKMTTELKYLINQ----INEIGTNKNEYEDIFRFMFLARKMDENYRELFDFI 119 Query: 126 KHEVSRLDV-VNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGG 184 S + + F R+ + S N +E +E + NL + AR+G Sbjct: 120 TPNDSYESLSLTFFEWLKRQKSIPMAEFLDSFENQDENEDQRSPLEIWGRNLCEEARLGK 179 Query: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCT 244 +D LIGREKE+E+ +Q LCRR+KNNPLLVGE+GVGKTA+ EG+A +I D PE + + Sbjct: 180 LDKLIGREKEVEKTLQTLCRRKKNNPLLVGEAGVGKTAVVEGIAQKIAFNDGPEKLKNKE 239 Query: 245 IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA 304 IY +++ S+LAGT YRGDFE+R L+ +L+ N I+F DEIHTI+GAG+ G D A Sbjct: 240 IYEINLTSMLAGTTYRGDFEQRVNDLIDELKNKKNVIIFFDEIHTILGAGSTGGSDADLA 299 Query: 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPK 364 + +KP L++G+I IG+TTY EF + F KD+AL RRF KIDI EP++E++ +I+ G P+ Sbjct: 300 DALKPALANGEISCIGATTYAEFRD-FGKDKALLRRFNKIDICEPTLEDSFKILKGGAPR 358 Query: 365 YEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA 424 YE H V+++ + + V L+ KY++D+ LPD A D+IDE GA L +V Sbjct: 359 YENFHGVKFSDEILNECVRLSKKYLSDKFLPDSAFDLIDEIGASFSLKGRHGEVSQDDVR 418 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 I SV+A I + + + LKNL LK +FGQD A++ L +A+ + AG+ E Sbjct: 419 KILSVMANAENI-----NSDNSEILKNLKTNLKSEIFGQDSAVDTLYKALLRSYAGIKDE 473 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 ++P+G FLF G +GVGKTE+ L+ +L + LRFDMSEYME ++VS+ IG+ PGYVGF+ Sbjct: 474 NRPIGVFLFTGNSGVGKTELAKVLANSLNVSFLRFDMSEYMEENSVSKFIGSAPGYVGFE 533 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 QGG+LT+AV KHP++VLL DEIEKA+P + NI L + DN +L+DN G KADF+N +++M+ Sbjct: 534 QGGILTNAVKKHPYSVLLFDEIEKANPTIINIFLGIFDNASLSDNLGEKADFKNTIIIMS 593 Query: 605 TNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 +N G +E ++G +D + + F+PE R R+D II F+ L+ +++ Q+VDK Sbjct: 594 SNLGTKEA--ATLGF-KRDTAEKINTAVHDFFSPELRARIDKIINFNPLNNEILKQIVDK 650 Query: 665 FIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 +I L+ +L K V ++ + A+ +L +KG + GAR + R+I + ++ E+LFG Sbjct: 651 YIKNLENKL--KNVKFDLDENAKEFLIKKGANTESGARNLKRIIDGEISDIISGEILFGK 708 Query: 725 LVDGGQVTVALDKEKNELTYG 745 L +GG V ++ + EK + Sbjct: 709 LKNGGTVKISTENEKLTFEFN 729 >UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bigelowiella natans RepID=Q3LW37_BIGNA Length = 897 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 261/823 (31%), Positives = 432/823 (52%), Gaps = 85/823 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL---SNPSAREALEACSVDLVALRQEL 58 +++L L +A A +T +LL +L + + L+ V+ + R E Sbjct: 67 FSEDLTNILALAQMEAAARSTFKITGPFILLGILMARGSTTGYAMLKTWKVNYLKARIEA 126 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + T + E R+L A + G ++ +V++A+F + S Sbjct: 127 DKIRSDLTNLF--GELPETYSFDDEAHRILDYAERYANFFGLVQIETIHVVMAMFRYKRS 184 Query: 119 QAAYLLRKHEVSRLDVVNFISHGT-----RKDEPTQSSDPGSQPNSEEQAGGEERMENFT 173 A ++ + + + + ++D E E+ ++ F Sbjct: 185 NAYRIIETITPNFESLEEIVDNIRPNISLKRDSKGFIYQAQKSELPELDPESEDIIDTFG 244 Query: 174 TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +L + A G DP+IGR+KE++R I+VL R+ KNNP LVG+ GVGKTAIAEGLA+RI Sbjct: 245 VDLTEKAEFGEGDPVIGRKKEIDRLIRVLARKSKNNPCLVGDPGVGKTAIAEGLAYRIWN 304 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 +VPE + + I +L++ ++AG+KYRGDFE R ++++ + + ILFIDEIHTI+GA Sbjct: 305 DEVPEFLKNKRIINLELTKIVAGSKYRGDFESRILSIIEMARFEDSVILFIDEIHTIMGA 364 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G++ G +DAAN++KP LS G+I +IG+TT +EF + D AL RRFQ + + EP+I E Sbjct: 365 GSSE-GTLDAANMLKPPLSRGEISLIGATTEEEFRKYIKADGALERRFQAVKVPEPTISE 423 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 +QI++G+K + +H V Y+ +A+ A V+ + +YI+D+ LPDKAID++DE+GA ++ Sbjct: 424 AIQILHGIKKNFGNYHGVVYSDEAIEACVKFSKQYISDKFLPDKAIDLLDESGAFVKMKE 483 Query: 414 ---------------------------------VSKRKKTVNVADIESVVARIARIPEKS 440 + + + +E V+ +I E Sbjct: 484 GYAIKNIEDYTFLIKSYRETKKAVVEKDIQKLKATLITEIKALKKVEQVLQKIKLSQEAI 543 Query: 441 VSQSDRDTLKNLGDR-----------------------------LKMLVFGQDKAIEALT 471 + + + D L V GQ++A+ A++ Sbjct: 544 KRDINNIRVVKVPDVETVIEEMTGVKIKEVSKSESENLLNLESILHKSVIGQEEAVTAVS 603 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERH 528 +A++ +R GL +P+ SF+FAGPTGVGKTE+ LS+ ++RFDMS++ E+H Sbjct: 604 KAMRKSRVGLRDPKRPIASFIFAGPTGVGKTELAKTLSRVYFDSEDAMIRFDMSDFAEKH 663 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 VS+LIG+PPGY+G+ GG LT+AV K PH+++L DE+EKAHPDV+ LLQV+D+G L D Sbjct: 664 NVSKLIGSPPGYIGYSDGGQLTEAVRKTPHSLVLFDELEKAHPDVYLPLLQVLDDGRLAD 723 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAME---------EIKKIFTPE 639 + G+ DF+N ++++T+N G +E E + + + D E I + F PE Sbjct: 724 SKGKIVDFKNTIIILTSNLGAKEVEARRKAIKQSSETEDISEKESFSIYNAAIAEYFRPE 783 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAM 699 F NR+D II F L+ ++++ F+ ++ + + G++++ ++ R + E GY A Sbjct: 784 FLNRIDEIIIFKRLTQSQVYEIFAIFMNSVKHRAAKLGITIQETERLRQLVTEAGYTPAF 843 Query: 700 GARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 GARP+ R I ++ PL+ +L +V G V + +K Sbjct: 844 GARPLKRTISRLIESPLSEMILSNEVVSGDTVLLDYYNKKVTF 886 >UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ClpA n=16 Tax=Campylobacter RepID=A7H2P9_CAMJD Length = 709 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 294/745 (39%), Positives = 457/745 (61%), Gaps = 42/745 (5%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEAC-SVDLVALRQELEAF 61 + L+ L+ A + + HEF+T EH+L ALL + ++ E DL L EL+ Sbjct: 5 ENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSTDFKDIFEEFSDGDLELLETELKNH 64 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 I Q V+ ++E + ++ +L + + NE+ + L + + S ++ Sbjct: 65 ISQNNKVI---KQEIEPTISVVLDEILLLS-----KNKNNEIKIIDFLEKLIQDSRSYSS 116 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 YLL+KH ++ + +H + + N T++L LA+ Sbjct: 117 YLLKKHNINLNKIQELQNH-----------------------ENIQNLSNHTSDLTLLAQ 153 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G IDPLIGR+ ELER +Q+L RR+KNNP+LVGE+GVGKTAI EGLA I + VP+ + Sbjct: 154 NGKIDPLIGRKFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAEKKVPKNLQ 213 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 + I+SLD+ S+LAGTKYRGDFEKR K +L +LE+ N+ILFIDEIHTI+GAG+ Sbjct: 214 NAKIFSLDMASILAGTKYRGDFEKRIKEILNELEKIPNAILFIDEIHTIVGAGSTGESHT 273 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 D +NL+KP LS+G ++ IG+TT+ E+ N F+K++ L+RRF KI++ EPS EE++QI+ GL Sbjct: 274 DFSNLLKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGL 333 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTV 421 K KYE H ++ + ++ AV K+ ND+ LPD AID++DE GA L P +K+ Sbjct: 334 KNKYEEFHHIKLNDEILQYAVIWGKKFFNDKFLPDCAIDLVDELGASFALNPKAKKN--A 391 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 N+ D+++V+A++ K L NL LK +FGQD+ I++L ++K + AG Sbjct: 392 NLKDLKNVLAKMTH-HHKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGF 450 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYV 541 + + P G FLF G +GVGKTE+ L++ LG+ L RFDMSEY E+H +S+LIG+P GY+ Sbjct: 451 KNSNTPRGVFLFTGSSGVGKTELCKALAEFLGLNLERFDMSEYAEKHAISKLIGSPAGYI 510 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 GF++GGLL++A+ K+P +++L DEIEKAHPD+ N LQ+ DN LTDN+G K DF+N ++ Sbjct: 511 GFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFKNTII 570 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 +MT+N G++E +G + N + IK F PEF NR+D I+ F+ L+ ++ ++ Sbjct: 571 IMTSNLGLKE--SNELGFLS-KNEEKSNRAIKDFFAPEFINRIDKILHFNDLNDAILVKI 627 Query: 662 VDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 ++K + E+ L + L V +A+ +LA+K Y++ G R + R+I + + + +++E+L Sbjct: 628 IEKELDEISKNL--NNIKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISDEIL 685 Query: 722 FGSLVDGGQVTVALDKEKNELTYGF 746 FG L GG + L + +L + F Sbjct: 686 FGKLKKGGIAKIKL-GKNGKLEFIF 709 >UniRef50_A5UYN2 ATPase AAA-2 domain protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UYN2_ROSS1 Length = 786 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 259/777 (33%), Positives = 401/777 (51%), Gaps = 47/777 (6%) Query: 1 MLN-QELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACS-VDLVALRQE 57 M + L L +A A A+ + EH+ LALL + E + V L A E Sbjct: 1 MFTSPGVSLILVLAVAEAQLTESSHLEPEHIFLALLKSEDISTETVPGMPQVSLAAATGE 60 Query: 58 LEAFIEQ-----------------TTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGR 100 ++ + S E + + + +A + R Sbjct: 61 IQRIAAFWQQEGISAKRLRRRLRAIVREMSKSRGEFSGHRSQRGRELFNKAETLAWQNQR 120 Query: 101 NEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE 160 + VT ++LV + L ++ + R ++ TQ + Sbjct: 121 DNVTPFDLLVCSLEIESKAIDMLFQEMNLERQKLLERARELLAWTPETQRKEI------- 173 Query: 161 EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 E R+ + +L LAR G + P+IGR +E+++ ++L +R KNNPLL+G+ GVGK Sbjct: 174 ---SQEHRLAKYGRDLTALARAGRLGPVIGRAEEIKQIARILVQRSKNNPLLLGDPGVGK 230 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 280 TAIAEGLA + + D + + +LL+G YRG FE+R + +++ QD N Sbjct: 231 TAIAEGLASYAASENAVTPLRDFYFVEISVAALLSGAMYRGQFEERVQEVIETARQDKNL 290 Query: 281 ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR 340 +LF+DEIHT++G+GA +DAAN++KP L+ G IR IG+TT E+ E D ALARR Sbjct: 291 VLFLDEIHTLMGSGAGGSSTLDAANMLKPALARGDIRCIGATTIDEYRKHIEPDGALARR 350 Query: 341 FQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 FQ + I EPS ET+ I+ GL+ K + HH + +A++ AV L+ +YI D + PDKAI Sbjct: 351 FQIVWIDEPSPTETLHILRGLRSKMQEHHQIEIPDEALQKAVSLSGRYITDGYQPDKAIT 410 Query: 401 VIDEAGARARL-----MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 V+DEA AR RL + + V DI VVAR +IP + + QSD + L +L + Sbjct: 411 VLDEACARRRLLTIHVQSSPTQTSHLEVEDIGQVVARRTQIPLEVILQSDEERLLHLEEE 470 Query: 456 LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG-- 513 L V GQD+A+ + EA++++R GL KP+ +FAGPTG GKTE+ LS+ L Sbjct: 471 LGKRVLGQDEAVRTVAEAVRISRVGLRAPGKPI-VLMFAGPTGTGKTELAKALSETLFFD 529 Query: 514 -IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 L+ DMSEY E H+V++LIG+PPGY+GF + L + HP++V+LLDEIEKAHP Sbjct: 530 PNRLITLDMSEYQESHSVAKLIGSPPGYIGFGEEPYLVRELRLHPYSVVLLDEIEKAHPS 589 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD----- 627 V + LQV D G LTD GR+ + + ++T+N G ++ IG + Sbjct: 590 VLTVFLQVFDEGRLTDARGRRINCGEAIFILTSNLGASIEVKRPIGFQGMEAEQHIAALV 649 Query: 628 ---AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQ 684 + I +PE NRL ++ F L + ++D ++ L QL ++ +S+ + Sbjct: 650 EANVKQIIAARLSPELVNRLQAVVVFRSLDEKTLDAILDLYVQGLNRQLAERQISIAMDA 709 Query: 685 EARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNE 741 A+ +L E+GY GAR + R + + +PL+ E+L G L G Q+ ++ + + Sbjct: 710 SAKAFLIEQGYSAEFGARHLKRAFERLIAEPLSREILSGKLKAGQQIIFFMEAGQLQ 766 >UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiales RepID=A8MFR5_ALKOO Length = 758 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 258/676 (38%), Positives = 402/676 (59%), Gaps = 58/676 (8%) Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 L K + + + + + +++ + ++ + TNL AR Sbjct: 84 LFKGSLGSFKMKEDEDIEVEETAEDKEEIFEEKAKKKKKGKKRKNLDTYGTNLTDRARNK 143 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 ID +IGR KE++R +Q+L RR KNNP+L+GE GVGKTAIAEGLA RIV+ VP + + Sbjct: 144 EIDRVIGRNKEIDRVVQILNRRSKNNPILIGEPGVGKTAIAEGLAGRIVEKQVPAKLFNA 203 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 +Y LD+ +++AGT++RG FE R KA++++ ++ N IL IDE+H I+GAG GG ++A Sbjct: 204 EVYLLDLTAIVAGTQFRGQFEGRMKAIIEEAQECGNIILVIDEVHNIMGAGEVHGGVMNA 263 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP 363 AN++KP L+ G+I+VIG+TT E+ EKD AL RRFQ + + EPS+E+T++I+ G+K Sbjct: 264 ANILKPALARGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVEEPSVEDTIEILKGIKG 323 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV--------- 414 YE +H V+ + + + AA +++ +YI DR+LPDKAID+IDEAG+R L Sbjct: 324 YYEDYHKVKISDEVIEAAAKMSERYITDRYLPDKAIDIIDEAGSRVNLRNEGLVEIEGLK 383 Query: 415 -----------------------------------------SKRKKTVNVADIESVVARI 433 K + V D+ V+ Sbjct: 384 VELKAIEEKKAEAAKKNDYEKAAQYKVDECRILDRIEELEAEVNKSALTVEDVAFVIESW 443 Query: 434 ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLF 493 IP +++ + L +L ++L V GQ A+ +L+ I+ R+G + KP SF+F Sbjct: 444 TNIPVGKITEEEASRLLSLEEQLHRRVVGQKDAVRSLSRTIRRNRSGFRKKRKP-ASFIF 502 Query: 494 AGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLT 550 GPTGVGKTE+ L++ L ++R DMSEYME+HTVS+LIGAPPGYVG+DQGG LT Sbjct: 503 VGPTGVGKTELVRALAEELFGSEEAMIRVDMSEYMEKHTVSKLIGAPPGYVGYDQGGQLT 562 Query: 551 DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR 610 D V + P++V+LLDEIEKAHPDVFN+LLQ++++G LTD+ GR F N V++MT+NAG + Sbjct: 563 DKVRRKPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSQGRTVHFENTVVIMTSNAGTQ 622 Query: 611 ETERKSIGLIHQDN---STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 + S+G ++ A + +K+ F PEF NR+D I F LS + + ++++ + Sbjct: 623 -IKSGSMGFGNRGYEALENRAKDALKETFRPEFLNRVDETIVFTQLSKEELREIIELMLK 681 Query: 668 ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVD 727 ++ + +KG+++ +S ++++ EKGYD GARP+ RVIQ +++ +A E + + V Sbjct: 682 DVIEDVKEKGMTITISDAVKDFILEKGYDEKYGARPLRRVIQRSIEDEIAEEYIKNTFVP 741 Query: 728 GGQVTVALDKEKNELT 743 G + V L +++ L+ Sbjct: 742 GDHIQVDLKEDRVVLS 757 >UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit clpA CD4B,chloroplast, putative, expressed n=5 Tax=cellular organisms RepID=Q53N47_ORYSJ Length = 918 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 259/797 (32%), Positives = 394/797 (49%), Gaps = 103/797 (12%) Query: 21 RHEFMTVEHLLLALLSNPSAREALE---ACSVDLVALRQELEAFIEQTTPVLPASEEERD 77 RH + L P A E A ++ L + + P P Sbjct: 143 RHSHVG--------LRQPHAGRLREMHTASGRPVIGLTPTIVSQKTTKVPKQPRFVARAI 194 Query: 78 TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNF 137 + + A Q + N+L+++ S+ L E+ Sbjct: 195 DNFSREVMNAIAVAHDEAQYIAHLTIGSTNILLSLISQ---YICIFL--LEIILNKAYKM 249 Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 R+ + + + TNL +LA G +DP++GR+K+++ Sbjct: 250 FRAAVRR---------------ATRGAKLATLMEYGTNLTKLAEEGKLDPVVGRQKQIDH 294 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 +Q+L RR KNNP L+GE GVGKTAIAEGLA I GDVPE + T+ SLD+G LLAGT Sbjct: 295 VVQILSRRTKNNPCLIGEPGVGKTAIAEGLAQLIATGDVPETIQQKTVISLDMGLLLAGT 354 Query: 258 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 KYRG+ E+R K +L++++Q+ ILF+DE+HT++ AG+A G +DAAN+ KP L+ G+++ Sbjct: 355 KYRGELEERLKNILEEIKQNGEIILFLDEVHTLVTAGSAEGA-IDAANIFKPALARGELQ 413 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD------- 370 IG+TT E+ EKD AL RRFQ + I E +++ETV I+ GL+ +Y+ HH Sbjct: 414 CIGATTINEYRKHIEKDAALERRFQPVKIPESTVDETVGILKGLRERYQGHHKVQYTDEA 473 Query: 371 ---------------------VRYTAKA-------------------VRAAVELAVK--- 387 + +A + A ++ +K Sbjct: 474 LVAAAELSHKHIRDRFLPDKAIDLMDEAGSIVRLRNAQCKPSKKVNDLEAELKKTLKEKN 533 Query: 388 -------YINDRHLPDKAIDVIDEAGARAR-----LMPVSKRKKTVNVADIESVVARIAR 435 + + L D + + A + P + V D+ ++R Sbjct: 534 DAISIQNFRRAKQLRDHELQLRTNISALTDKKTQMMEPDAIAMPVVTEDDVRHAISRWTG 593 Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 +P VS + L L + L V GQ +A+ A++ AI+ AR GL H +PV S +FAG Sbjct: 594 VPLHKVSMDESRKLLKLEEALHRRVVGQGEAVAAVSRAIRRARLGLKHPGRPVASLVFAG 653 Query: 496 PTGVGKTEVTVQLSKALGI-------ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 PTGVGK+E+ L+ ++R DMSEYME+H V+RL+G+PPGYV +GG Sbjct: 654 PTGVGKSELAKALAAYYYGSSESEEAAMVRLDMSEYMEKHAVARLVGSPPGYVWHGEGGQ 713 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT+AV + PHAV+LLDE+EKAH DVF++LLQV+D+G LTD GR DF+N ++VMTTN G Sbjct: 714 LTEAVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGRLTDGKGRTVDFKNTLIVMTTNIG 773 Query: 609 VRETERKSIGLIHQDNSTD--AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFI 666 +E+K+ F PEF NRLD +I F L+ + ++ + Sbjct: 774 SSLIVNNGGDGAAAAGRIKNTVTDEMKRHFRPEFLNRLDEVIMFQPLTELEVGKIAGIML 833 Query: 667 VELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLV 726 E ++ +KG+ L+V+ + R + E+G+D + GARP+ R + L+ LA ++L G + Sbjct: 834 EEFAGRVREKGIKLKVTDKFRELVVEEGFDPSYGARPLRRAVVRLLEDTLAEKMLAGEVR 893 Query: 727 DGGQVTVALDKEKNELT 743 +G V V D N + Sbjct: 894 EGDSVIVDADSAGNAVV 910 >UniRef50_A0RNV1 ATP-dependent Clp protease ATP-binding subunit ClpA n=2 Tax=Campylobacter fetus RepID=A0RNV1_CAMFF Length = 732 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 295/785 (37%), Positives = 464/785 (59%), Gaps = 88/785 (11%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSV-DLVALRQELE 59 M+ L S+ A A HE++ VEH+L AL + + L + V D VALR +L Sbjct: 1 MIQNNLAKSIKQANELAISKSHEYIGVEHILYALTFDTEFLKTLSSLGVSDPVALRNDLV 60 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEV-TGANVLVAIFSEQES 118 I+Q P E + T +L S E+ + L I ++ S Sbjct: 61 GLIDQ----FPRLESPKPPVLTYKLSEIL-------SSIKEEEIFDAEDFLEEILEDKSS 109 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 A +L+ H ++ ++ F +NLN Sbjct: 110 SAYQVLKFHGLN---------------------------------DEQDDTSQFVSNLND 136 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 + + IDP+IGRE+E+++A+++LCR +KNNP+ VGE+GVGKTAI +G+ +IV G VP+ Sbjct: 137 MVKNSKIDPVIGREEEIQKALEILCRHKKNNPIFVGEAGVGKTAIVQGIVQKIVNGKVPD 196 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + I++LD+ SL+AG KYRG+FE+R K+++ +L+++ N I+FIDEIH+I+ +++ Sbjct: 197 RLKNSIIFNLDVSSLIAGAKYRGEFEERLKSIISKLKENKNHIIFIDEIHSIMSQNSSNE 256 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +D AN++KP L++G IR IG+TTY EF N F KD+AL RRF KID++EP+ +E I+ Sbjct: 257 NSLDVANILKPHLANGDIRCIGATTYSEFRN-FNKDKALLRRFNKIDVSEPNPDECFLIL 315 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM------ 412 GLK YE H+V Y+ + ++ ++ELA +Y++D+ LPD AID+IDE GA+ + Sbjct: 316 KGLKSTYEKFHNVTYSDEILKLSIELAKRYLSDKFLPDSAIDIIDETGAKLSIANPNKLN 375 Query: 413 ---------------------------PVSKRKKTVNVADIESVVARIARIPEKSVSQSD 445 + KK V +DI + V+++A I + + + Sbjct: 376 LKDETVWSYAINVDDEFDNLEAIKNEAEKNNSKKRVLKSDILNTVSKMANISNLNENSDN 435 Query: 446 RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVT 505 LKNL LK +FGQD AI+AL +A+ + AGL +KP+G FLF G +GVGK+E+ Sbjct: 436 TKILKNLKANLKAKIFGQDSAIDALNDALISSYAGLNEPNKPIGIFLFTGSSGVGKSELA 495 Query: 506 VQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDE 565 +L+ +L + R+DMSEYME+H+VSRLIGAPPGY+GF+ GGLLT+ V KHP++V+L DE Sbjct: 496 NELANSLNVHFERYDMSEYMEKHSVSRLIGAPPGYIGFESGGLLTNMVKKHPYSVILFDE 555 Query: 566 IEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS 625 IEKA+ ++ NI LQ+ D+ +LTDN+G K+DF+N +++MT+N G +E ++G +++ S Sbjct: 556 IEKANDEMINIFLQIFDSASLTDNSGNKSDFKNTIIIMTSNLGTKE--PNTLGF-NKNLS 612 Query: 626 TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQE 685 + +K F+ EFRNR+D II F+ LS D++ ++V+K I L+ K + + +S++ Sbjct: 613 DKTDKAVKGFFSSEFRNRIDKIIRFNDLSKDILEKIVEKEISNLEKM--AKKIKINLSKK 670 Query: 686 ARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 A N + +G+ GAR + RVI+D++ ++ ELLFGSL GG+V + D E + Sbjct: 671 ALNEIINQGFSDEYGARNLKRVIKDSINSSISKELLFGSLKRGGEVYIEFDGE---FKFD 727 Query: 746 FQSAQ 750 F++ + Sbjct: 728 FKANK 732 >UniRef50_C8PIY8 ATP-dependent CLP protease ATP-binding subunit n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PIY8_9PROT Length = 793 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 293/790 (37%), Positives = 465/790 (58%), Gaps = 57/790 (7%) Query: 6 LELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSVDLVALRQELEAFIEQ 64 L A + A + E++T H++ A+ N + D+ L + + Sbjct: 6 LNKHFEQAISVANDGEDEYITTSHVVYAIFKYNKPFHGLIAKEIPDINYLN--ILDNLGG 63 Query: 65 TTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLL 124 ++P S + Q T+ F++ + + + + ++ I +++E+ +L Sbjct: 64 LLDMMPKSSGKAPAQ-TIEFKQ-FYTELNNAKEPKNEL----DFMLKILNDKENDCTKIL 117 Query: 125 RKHEVSR-----------------------------------LDVVNFISHGTRKDEPTQ 149 + ++ +D + + + Q Sbjct: 118 NHYGINAAIFELIVRKYKSAFDHRDEVVSRDEAAAIKLNSYDIDDITHAMNYDESRKQWQ 177 Query: 150 SSDPGSQPNSEEQAGGEERMEN------FTTNLNQLARVGGIDPLIGREKELERAIQVLC 203 +++ E+ A E ++ +T NLN++A G IDPLIGREKE+E+ +Q LC Sbjct: 178 NTEFEPAFEGEKDAINERDIKKDSPSSLYTANLNKIALEGKIDPLIGREKEIEKTLQTLC 237 Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 RR+KNNP+LVGE+GVGKTAI EG+A +IV+G+VPE + + IY+LD G+L+AGT RG+F Sbjct: 238 RRKKNNPILVGEAGVGKTAIIEGIALKIVRGEVPEKLKNKVIYALDAGALIAGTTLRGEF 297 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTT 323 E+R K L+ + + N+ILFIDEIHTI+GAG + ++D +N++KP L+SG++ VIG+TT Sbjct: 298 EERLKDLIDEFSANQNAILFIDEIHTIVGAGTGNRNELDMSNILKPSLASGELSVIGATT 357 Query: 324 YQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVE 383 Y E+ + F +D+AL+RRF KID++EPSI+++V+I+ G+ KYE H V+++ + +R +V Sbjct: 358 YGEYRS-FSQDKALSRRFCKIDVSEPSIDDSVEILKGVAKKYEEFHGVKFSDEILRDSVT 416 Query: 384 LAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQ 443 LA KY +D+ LPD AID+IDE GA P ++ D+ + ++ A I S S Sbjct: 417 LAKKYQSDKFLPDSAIDLIDEVGASFAFKPHEAP-LEISKDDLVNTLSISANIANLSSSV 475 Query: 444 SDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTE 503 ++ LKNL +K +FGQD+A+ +L +A+ + AGLG P+G FLFAG +GVGK+E Sbjct: 476 DNKQVLKNLEANIKREIFGQDEAVSSLCKALLRSYAGLGGASSPIGVFLFAGSSGVGKSE 535 Query: 504 VTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLL 563 + L+ LG+ R+DMSEYME H+VSRLIGAPPGYVGF+ GG+LT+ + KHP++V+L Sbjct: 536 LAKVLAAQLGVHFERYDMSEYMEAHSVSRLIGAPPGYVGFENGGILTNNIKKHPYSVILF 595 Query: 564 DEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQD 623 DE+EKAHP + NI L + DN +LTDNNG DF+N +++M++N G +E + +D Sbjct: 596 DEVEKAHPSMTNIFLGIFDNASLTDNNGVTTDFKNTIIIMSSNLGTKEAPQVGF---TKD 652 Query: 624 NSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVS 683 S IK F PEFRNR+D II F+ LS +++ ++VDK I EL+ QL K V + ++ Sbjct: 653 ESYKVDSAIKSFFAPEFRNRIDKIINFNRLSGEILEKIVDKTIGELESQL--KNVKISLN 710 Query: 684 QEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 +EA++ + +GY GAR + R I + ++ ELLFG+L +GG V+V++ + + Sbjct: 711 KEAKDLIISRGYSDEFGARNLKREISSQISDHISGELLFGALQEGGLVSVSVKDGELSFS 770 Query: 744 YGFQSAQKHK 753 + + + Sbjct: 771 FASTPLPQIE 780 >UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR Length = 643 Score = 570 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 250/636 (39%), Positives = 376/636 (59%), Gaps = 23/636 (3%) Query: 115 EQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTT 174 E++ A +L K+ + + + Sbjct: 5 EKQHFKADMLNKYGTDLTKMAQEVKPDFSFSHVLAEPVTSELATITLTLASLNGI----- 59 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 G +D ++GR K++ER Q+LC+RRKNNP LVG+ GVGKT I EGLA IV+G Sbjct: 60 ------LQGKLDQVVGRRKQIERVTQILCKRRKNNPCLVGDPGVGKTVIVEGLAANIVKG 113 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGA 293 VP + I++LD+ L+AGTK+ GDFE+R ++ +++Q D N +LFIDE+HT++G Sbjct: 114 TVPSKLEGKKIFALDMARLVAGTKFHGDFEERLTGIVDEVKQSDGNIVLFIDELHTLVGN 173 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G +DA N++KP L+ G+++ IG+TT E+ EKD AL RRF +D+ EPS++E Sbjct: 174 GQT----LDATNILKPALARGELKCIGATTIDEYRRYIEKDGALKRRFLHVDVPEPSVDE 229 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 V+I+ G++ KYEAHHDV+Y +A+ AAV L+ +YI+ LPDKAID+IDEAGAR +L Sbjct: 230 AVEILKGIQGKYEAHHDVKYADEALVAAVRLSNQYISGLFLPDKAIDLIDEAGARVQLRQ 289 Query: 414 V--SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 + K V DI++VV+ + IP V+ + L N+ L + GQ++A++A++ Sbjct: 290 ARSASEKLLVTEEDIQAVVSMVTGIPLDKVTDKESRRLLNMEAELHKYIVGQEEAVKAVS 349 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERH 528 AI+ AR G +KP+ SFLF GPTGVGKTE+ L+ ++R DMSEYME+H Sbjct: 350 HAIRRARVGTKDPNKPIASFLFTGPTGVGKTELAKALAVEYFGSKEAVVRIDMSEYMEKH 409 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 TVS+L G+PPGY+G+D GG T+AV H V+L DEIEKAH DV + LQ++D+GTLTD Sbjct: 410 TVSKLFGSPPGYIGYDDGGQFTEAVRCRAHTVVLFDEIEKAHQDVNRVFLQILDDGTLTD 469 Query: 589 NNGRKADFRNVVLVMTTNAGVRET--ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDN 646 GRK DF+N +++MT+N G E + + EE+KK F+PEF NR+D Sbjct: 470 GKGRKVDFKNTIIIMTSNIGNSLIAQEDEEDEIRFNTVKLIVAEELKKEFSPEFLNRIDE 529 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 +I F L+ ++++ D + E+ +L K + + V+ + + E+G + + GARP+ R Sbjct: 530 VIVFRKLNNAQLNEIADLMLAEVYGRLKAKNIIIRVTDGLKRKIIEEGNNLSYGARPLKR 589 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 I L+ +A +L G + +G V V ++ N + Sbjct: 590 AIVRLLEDNIAKGILNGFVEEGRSVIVDVNSNGNVI 625 >UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37703 Length = 792 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 248/674 (36%), Positives = 376/674 (55%), Gaps = 62/674 (9%) Query: 140 HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAI 199 + P+ SD + E+ + + ++ TNL+Q A G +D +IGR+KE+ R I Sbjct: 124 SESGNSSPSGKSDKKGSSSRREKKKELKFLGSYCTNLSQKAADGQLDNIIGRDKEIARVI 183 Query: 200 QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKY 259 Q+L RR KNNP L+GE GVGKTAIAEG+A RI GDVP +AD +Y LD+ +L+AGT++ Sbjct: 184 QILSRRTKNNPCLIGEPGVGKTAIAEGIAQRINSGDVPFNLADKKLYLLDLTALVAGTQF 243 Query: 260 RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVI 319 RG FE R K L+ +++++ N ILFIDE+H ++GAG + G ++AAN++KP LS G+++VI Sbjct: 244 RGQFESRVKGLVDEVKREGNIILFIDEVHNLVGAGDSE-GSMNAANILKPALSRGEVQVI 302 Query: 320 GSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVR 379 G+TT+ E+ EKD AL RRFQ + + EP+IE+TV ++ G+K YE +H + + VR Sbjct: 303 GATTFGEYRKYIEKDSALERRFQPVTVNEPNIEDTVSVLLGIKKYYEEYHHLHISDYLVR 362 Query: 380 AAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT------------------- 420 L+ +YI DR LPDKAID++DEA A + + Sbjct: 363 VCAVLSERYITDRFLPDKAIDLMDEACAYTCIRSPEIAEYEKIKKEISVLEGMEKSISEQ 422 Query: 421 ---------------------------------VNVADIESVVARIARIPEKSVSQSDRD 447 V DI VV IP +++++ Sbjct: 423 DEIDYQALAEVKGKLIHAREDEAKLRDKAESVEVTEGDIAKVVELWTGIPASKIAENEFL 482 Query: 448 TLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQ 507 + L LK V GQD+A+E LT+AIK R L +P SF+F GPTGVGKTE+ Sbjct: 483 KIAKLEGALKSRVLGQDEAVEVLTKAIKRTRVQLSKRRRP-ASFIFVGPTGVGKTELVKA 541 Query: 508 LSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLD 564 L++ + L+R DM+EYME+H+V+R+IG+PPGYVG+D+ G LT+ V + P++V+L D Sbjct: 542 LAEEMFDSPEPLIRLDMTEYMEKHSVARMIGSPPGYVGYDEAGQLTEKVRRRPYSVILFD 601 Query: 565 EIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN 624 EIEKAHPDV NIL+Q++D G + D +GR +F N ++ MT+NAG + D Sbjct: 602 EIEKAHPDVMNILMQILDEGKVDDAHGRTVNFENTIICMTSNAGSTDKSVGVGFNRTADE 661 Query: 625 --STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV 682 AM+ +++ PEF +R+D I+ F L+ + + + E++ L +K + L Sbjct: 662 VSKDKAMKGLREFLRPEFISRIDEIVVFRQLTKENFADIAALMLDEMKEPLAEKNIGLTY 721 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 + EA +AEK + + GAR + RVI+ ++ +A ++ T+A+ +L Sbjct: 722 TPEALKLIAEKSFGKPYGARDIRRVIRQEVEDKVAEIIIEN---ASDTETIAVSANGEQL 778 Query: 743 TYGFQSAQKHKAEA 756 + EA Sbjct: 779 VVEGVKKENKTYEA 792 >UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,ClpB n=3 Tax=Gammaproteobacteria RepID=A1STR4_PSYIN Length = 828 Score = 569 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 283/811 (34%), Positives = 422/811 (52%), Gaps = 83/811 (10%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEA 60 Q++ L +AFA R +T + LL+ALLS P A + L+ + + Sbjct: 22 TQKVIGCLEIAFAELGSLRLNILTSDFLLVALLSQPDSEAHKILQELLPNEDDAPLRIVG 81 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 I Q P ++ + R + V + A + G + + + +A F + Sbjct: 82 QIRQKYP-PASNVQARQILASQEIVEVFRVAYDEAKDFGDDYIGTGTLFLAFFHKDAGHV 140 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A +L + + H R G Q NS++ G + ++ +T +L ++A Sbjct: 141 ADILNNEGIRVDQARQALKHIRR----------GHQLNSQDAEGKPDILDIYTKDLTEMA 190 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G +DP+IGRE+E+E IQ L RR+KNNP L+GE GVGKT I EGLA RIV DVP+ Sbjct: 191 RKGELDPVIGREEEIELIIQTLSRRKKNNPALIGEPGVGKTVIVEGLAQRIVAADVPDSQ 250 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTIIGAGAASGG 299 + + +LD+G L+AG RG+FE+R K++ +E ILFIDE+HT++GA A SGG Sbjct: 251 LNKRLLALDMGELVAGASMRGEFEERLKSVRDAVIEAGGKVILFIDELHTVVGANAGSGG 310 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA +L+K L+ G ++VIG+ T E+ E D+AL RRF I + EPSIEET+ I+ Sbjct: 311 -IDAPSLLKTALAQGTLQVIGADTLDEYQKYIETDKALERRFHPILVREPSIEETIAILQ 369 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G P+YE HHD+ Y A AA L+ +YI DR LPDKA+D+IDEAGAR L + + Sbjct: 370 GAAPRYEKHHDIHYALPAFEAAARLSERYIADRCLPDKAVDLIDEAGARKHLRLTAIPQN 429 Query: 420 TVNVAD-----IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ----------- 463 ++ + + V+ + + LK+ + Q Sbjct: 430 LRDLERKHQGLLRDKTGAFNAQNFEQVAATQMEILKSDQKLKEARSDWQQGRAKEDAMVT 489 Query: 464 -DKAIEALTE----------------------------------------AIKMARAGLG 482 D E + AI+ RAG+ Sbjct: 490 SDDIAEVVARWTGIPVARMVESESEKLARMEEKLHQRIVGQEDAVRAVADAIRRNRAGIT 549 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPG 539 + +P+GSFLF GPTGVGKTE+ L+ L + ++R DMSEYMERH VS++IGAPPG Sbjct: 550 NSRRPIGSFLFLGPTGVGKTELARALAAFLLDDETRIIRLDMSEYMERHEVSKMIGAPPG 609 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 Y+G+ +GG LT+ V +P+ V+LLDE+EKAHPDVFN+LLQ++++G LTD GRK FRN Sbjct: 610 YIGYGEGGQLTERVRHNPYTVVLLDEMEKAHPDVFNMLLQILEDGQLTDAKGRKVSFRNT 669 Query: 600 VLVMTTNAGVRETER--------KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 V++ T+N G S L +++ M E+KK F PEF NRLD+II F Sbjct: 670 VIIGTSNLGTGSLSPDKRPIGFIHSDSLNYKETQDLVMHEVKKFFKPEFLNRLDDIIVFH 729 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 +L + + Q+ F+ EL ++ +G+ LEV + L+ G+D GARP+ R ++ Sbjct: 730 YLEKEHVRQIAQMFVAELVERMKLRGIVLEVDNAVIDKLSADGFDPIYGARPLRREVERQ 789 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 ++ LA +++ D V V + ++ Sbjct: 790 IENVLAMKVVRNEFSDNSVVQVKMQDKEIVF 820 >UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G683_9DELT Length = 767 Score = 567 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 344/750 (45%), Positives = 464/750 (61%), Gaps = 79/750 (10%) Query: 86 RVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKD 145 RVLQRAV HVQ +G+ EVTGAN+LVA+F+E ES A YLL + V R DV FISHG K Sbjct: 5 RVLQRAVLHVQGAGKAEVTGANLLVALFAEPESMAVYLLEQKGVRRRDVTLFISHGIGKG 64 Query: 146 E----PTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQV 201 P +E + ++ + + +L A G IDPL+GRE+EL R IQV Sbjct: 65 NSRSAPRSRPTGPGADGEDEDSVADDPLTAYAVDLAARAASGDIDPLVGREQELTRLIQV 124 Query: 202 LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG 261 LCRRRKNNP+LVGE GVGKTA+ EGLA + VPE +AD IY+LD+GSLLAGTK+RG Sbjct: 125 LCRRRKNNPVLVGEPGVGKTAVVEGLALAVHDQKVPEPIADAHIYALDMGSLLAGTKFRG 184 Query: 262 DFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGS 321 FE+R KA++ +E+ +ILFIDEIHT+IGAGA SGG +DA+N++KP L++G++R IG+ Sbjct: 185 QFEERLKAVVAAIEEQPGAILFIDEIHTVIGAGATSGGSMDASNMLKPALNAGRVRCIGA 244 Query: 322 TTYQEFSNIFEKDRALARRFQKID-ITEPSIEETV--------------------QIING 360 TTY+E+ F++D ALARRFQKI+ + + E + I Sbjct: 245 TTYKEY-KNFDRDPALARRFQKIEIVEPTTDEAILILQGLKPAYEAHHNVSYTPDAIEES 303 Query: 361 LKPKYEAHHDVRYTAKAVRAAVE--------LAVKYINDRHLPDKAIDVIDEAGARARLM 412 ++ ++ D R A+ E K LP D + A ++ Sbjct: 304 VRLAHKYLRDRRLPDSAIDVMDETGAAARLGDYGKAKPAGALPAGDEDAPEGADSKEPKA 363 Query: 413 PVSKRKKT-------------------------------------------VNVADIESV 429 + + T ++V +E+V Sbjct: 364 EEAADEMTLAVGETTALERRDPGPVIHTGEAAPREAAPGAGEAAEAGEAIIIDVPQVETV 423 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 +AR+ARIP KSVS DR LK LG+ L+ ++FGQD+A+ T+AIK ARAGL KP+G Sbjct: 424 IARMARIPPKSVSTDDRAVLKGLGEGLRQVLFGQDEAVATATKAIKRARAGLARPDKPIG 483 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 FLF GPTGVGKTE+ QL++ LG+ LRFDMSEYME+H+VSRLIGAPPGYVGFDQGG L Sbjct: 484 CFLFTGPTGVGKTELARQLARLLGMPFLRFDMSEYMEKHSVSRLIGAPPGYVGFDQGGQL 543 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGV 609 TD+V K+PH+++LLDEIEKAHPD+F++LLQVMD+ TLTD G+K DFRNV+L+MT+NAG Sbjct: 544 TDSVAKNPHSIVLLDEIEKAHPDIFSVLLQVMDSATLTDTTGKKTDFRNVILIMTSNAGA 603 Query: 610 RETERKSIGLIHQDNSTD--AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 E ++ +G D + D A + +++ F+PEFRNRLD I+ F L VI +V DK + Sbjct: 604 FEMTQRKVGFGSDDGNVDSAANKALERTFSPEFRNRLDKIVTFGQLPQPVIEKVADKMLR 663 Query: 668 ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVD 727 EL++QL ++ V L + AR+W++ KGYD+ GARPMARVI + +K L +ELLFG L Sbjct: 664 ELEIQLSERDVRLTWTPAARDWVSRKGYDKKFGARPMARVIDEAIKGALVDELLFGRLEG 723 Query: 728 GGQVTVALDKEKNELTYGFQSAQKHKAEAA 757 GG V V D+ ++EL + F + + + EA Sbjct: 724 GGSVEVDCDRAEDELVFRFTARDEDEGEAE 753 >UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=Clostridiales RepID=C7H8Y8_9FIRM Length = 767 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 242/657 (36%), Positives = 370/657 (56%), Gaps = 63/657 (9%) Query: 147 PTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRR 206 + ++++ + ++ + NL + AR G +D +IGR++E+ R IQ+L RR+ Sbjct: 112 AQNGKNEKKAGKNDKKPPRRKFLDTYCENLTRKAREGKLDDIIGRDREIYRTIQILSRRQ 171 Query: 207 KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKR 266 KNNP L+GE+GVGKTAIAEG+A RI +G VP + D I+ LD+ SL+AGT++RG FE+R Sbjct: 172 KNNPCLIGEAGVGKTAIAEGIAERIAKGQVPAGLQDKEIFLLDLTSLVAGTQFRGQFEQR 231 Query: 267 FKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 K LL +++ N ILFIDEIHTI AG + G ++A N++KP LS G+I+VIG+TT+ E Sbjct: 232 VKGLLSEVKAAGNVILFIDEIHTITSAGESEGA-MNAGNILKPALSRGEIQVIGATTFNE 290 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + EKD+AL RRFQ + + EPS+ +T+ ++ G+K YE HH V+ A + A V L+ Sbjct: 291 YRKYIEKDQALERRFQPVRVEEPSVADTLAVMGGIKHYYEEHHHVQVPADVLNATVTLSE 350 Query: 387 KYINDRHLPDKAI---------------------------DVIDEAGARARLMPVSKR-- 417 +YI DR+LPDKAI + + + A V++ Sbjct: 351 RYITDRYLPDKAIDLLDEACACCNLAHPVISEYLTMQKELEALKQEEADMENADVNEPID 410 Query: 418 --------------------------KKTVNVADIESVVARIARIPEKSVSQSDRDTLKN 451 + V + D+ V+ IP + +++ L + Sbjct: 411 YERVAERKTRMAQLERELPAKQAAAGEIQVTMDDVAKVIELWTGIPAVKIRETEYAKLAS 470 Query: 452 LGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA 511 L LK + GQD A+ + +A+K +RA L +P SF+F GPTGVGKTE+ QL+ Sbjct: 471 LETELKKKIIGQDDAVHLVAQAVKRSRADLSGRRRP-ASFIFVGPTGVGKTELVKQLANQ 529 Query: 512 LGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEK 568 L L+R DMSEYME++ VSR+IG+PPGYVG+++ G LT+ V + P++V+L DEIEK Sbjct: 530 LFDGPDPLIRLDMSEYMEKYAVSRMIGSPPGYVGYEEAGQLTEKVRRRPYSVVLFDEIEK 589 Query: 569 AHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL---IHQDNS 625 AHPDV NILLQ++D G + D GR DF N V+ MT+NAG + S+G + N Sbjct: 590 AHPDVMNILLQILDEGKINDAQGRTVDFSNTVICMTSNAGSSDQTTASLGFNRSEEERNE 649 Query: 626 TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQE 685 + + + + PEF R+D +I F LS + + + + E + ++ KG++ + Sbjct: 650 EKSRKALSQFLRPEFLGRVDEVITFKPLSEETLQGIAALMLDEYKPSMEAKGIAYSYTPA 709 Query: 686 ARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 A L K GAR + R I+ ++ P A +++ G+LV G +TV + ++ L Sbjct: 710 ALAALVHKSQGGKFGARDLRRTIRKAVEDPAAEKIIDGTLVSGSTLTVDAENDEIVL 766 >UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomonas reinhardtii RepID=A8I1M5_CHLRE Length = 997 Score = 565 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 249/840 (29%), Positives = 391/840 (46%), Gaps = 109/840 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE--ALEACSVDLVALRQELE 59 + ++ +A A A+ H + EH+LL L++ S + L + V + +E Sbjct: 78 FTERSIKTVMIAQAEAKAFGHTEVNTEHILLGLVAEESLSKNGYLNS-GVSSERAKAAVE 136 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 A + PV + +++ + A + S N ++ ++L+A+ S + Sbjct: 137 ALFGRKRPV----SHGESIPFSREVRKMFENATHECKRSNVNWISPEHILLAMLSMPDCN 192 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 +L + G R T + + + + G + E + +L Sbjct: 193 GKRVLHSLSADVEGLKAE--AGKRLKGDTDAEQAKKKQGAAAKEQGPKMTEEYCKDLCAE 250 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV---QGDV 236 R G IDP++GR++E+ R Q+L RR KNNP+L+GE GVGKTAIAEGLA IV + Sbjct: 251 VRAGRIDPVVGRDREVGRVCQILARRTKNNPILLGEPGVGKTAIAEGLAAAIVHRAASPL 310 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA 296 PE + I LD+G L+AG K RG+ E R L+ ++ + N IL IDEIHT++GAG+ Sbjct: 311 PEFLHSKRILQLDVGLLIAGAKERGELESRVTKLIAEIREAGNIILMIDEIHTLVGAGSV 370 Query: 297 SGGQ---VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G +D ANL+KP L+ G+ +VIG+TT E E+D AL RRFQ + + EP+ E Sbjct: 371 GRGGGGGLDIANLVKPALARGEFQVIGATTLDEHRKYIERDAALERRFQPVTVDEPTPEA 430 Query: 354 TVQII----------------------------NGLKPKYEAHHDVRYTAKAVRAA--VE 383 T+ I+ + ++ + +A A Sbjct: 431 TLTILQGLKERYERHHRCAYTEEALAAAVALSHKYIADRFLPDKAIDLIDEAGSRARIAA 490 Query: 384 LAVKYINDRH----------------------------------LPDKAIDVIDEAGARA 409 + R P + + RA Sbjct: 491 YTARQNQARAGAGGRQQQLTMAPGGAGGDLSRGNQKQEEACINANPGVLPACLPQVDYRA 550 Query: 410 RLMPVS---KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKA 466 L S V V DIE++VA IP + +S +++ L N+ L V GQ A Sbjct: 551 ELAGPSCEGSVLPVVGVEDIEAIVAAWTSIPVERMSDGEKERLLNMRHTLASHVVGQADA 610 Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSE 523 +EA++ A+ AR GL +PV + LF GPTGVGKTE+ LS+ LLR DMSE Sbjct: 611 VEAISTALCRARCGLNLPRRPVAALLFVGPTGVGKTELAKVLSEQYYGSREALLRLDMSE 670 Query: 524 YMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDN 583 YMERH+VS+L+GAPPGYVGF GG LT+A+ + P +V+L DEIEKAHPDVF+ILLQ++++ Sbjct: 671 YMERHSVSKLVGAPPGYVGFGDGGKLTEAIRRRPFSVVLFDEIEKAHPDVFSILLQILED 730 Query: 584 GTLTDNNGRKADFRNVVLVMTTNAGVRET--------------ERKSIGLIHQDNS---- 625 G LTD+ GR F+N ++++T+N G R R +G D Sbjct: 731 GRLTDSQGRVVSFKNAMIILTSNVGSRLIAAAGNAARNGAGVFSRPGMGAGPTDEKLQAA 790 Query: 626 ------TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVS 679 + + E++ F PE NR D + F L + + + + + + ++G+ Sbjct: 791 QAFKLKQEVLGEVRGFFAPELLNRFDETVVFQRLRREDVAHIAQLLLAQTIARAGERGLG 850 Query: 680 LEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 L ++ + +G+ GARP+ + I + PL++ +L G + + L+ + Sbjct: 851 LRIAPALMEHIVAEGHSDEYGARPLRQAIVRLVDDPLSDAVLHRKFGAGVALVLGLNSDG 910 >UniRef50_D1Z247 ATP-dependent Clp protease ATP-binding subunit ClpA homolog n=1 Tax=Methanocella paludicola SANAE RepID=D1Z247_METPS Length = 782 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 246/778 (31%), Positives = 397/778 (51%), Gaps = 41/778 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSV--DLVALRQELE 59 L S ++A A R + EHL + ++S A + + + ++ A+R LE Sbjct: 6 LTAGASRSWDIAAEEASRSRSRVIEKEHLFIGIMSLDKAVDTADPGPIKAEMDAIRNVLE 65 Query: 60 AF-------------IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGA 106 + + S+E R + + + +RA RNE++ Sbjct: 66 GACDRPSPAAVIRRGVRKALGSADKSQEPRVFHRSEECKALFRRAGGLS--YARNEISSL 123 Query: 107 NVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGT--------RKDEPTQSSDPGSQPN 158 ++L AI L + D++ + + + S N Sbjct: 124 HLLAAILECPGPAIEAALSGAGIDFRDMMEPAYAWIAILEGGDKQFQRSMEKKEISSAVN 183 Query: 159 SEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV 218 +E +L + A G + P R+KEL + IQVL RR KNNP+L+GE+GV Sbjct: 184 DWLGLKHGGYLEKHGRDLTREAMAGRLGPFSERKKELLQLIQVLGRRAKNNPVLIGEAGV 243 Query: 219 GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT 278 GKTA+ E LA RI +G V+ I L + SL+A TKYRGD E+R +L + D Sbjct: 244 GKTAVVEALAMRIARGKDAHVLGGKRIIQLSMASLVANTKYRGDLEERLTGVLDEAVADP 303 Query: 279 NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALA 338 +LFIDEIHT++GAG + G +DA+N++KP L G +R IG++T E+ E D AL Sbjct: 304 GIVLFIDEIHTVVGAGRSDGSALDASNILKPYLVRG-LRCIGTSTIAEYHRHIEADPALE 362 Query: 339 RRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKA 398 RRF+ I + EP EE + ++ L+PK E HH VR +A+ A+V+L++++ + LPDKA Sbjct: 363 RRFETILVEEPCREEALAMLGTLRPKLEEHHGVRILDEALEASVDLSMRFDAEHMLPDKA 422 Query: 399 IDVIDEAGARAR-----LMPVSKRKKTVNVADIESVVARIARIP----EKSVSQSDRDTL 449 +D++D A + AR + + + ++ V+ I +A A +P + L Sbjct: 423 VDLLDMACSGARIPVLSMGSMDEPRRQVDARSIAETLAGSAGMPLELAASHLEGPTTSRL 482 Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 L L+ + GQ++AI +++ + +A +G+ P+ FLF GPTGVGKTE L+ Sbjct: 483 LGLEGFLRGRLAGQEEAIAKVSKRLMVAYSGIEKRQGPLAVFLFTGPTGVGKTETARLLA 542 Query: 510 KALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI 566 + L E++R D+SEY E ++V+RLIG+PPGY+G+++ GLL + P+ V L DE+ Sbjct: 543 EFLFGSPSEMIRLDLSEYSEENSVARLIGSPPGYIGYEESGLLVRMLRARPYTVALFDEV 602 Query: 567 EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST 626 EKAHP VF++ LQ+ D G +TD+ GR AD RN + ++T+N S + + Sbjct: 603 EKAHPRVFDVFLQLFDEGRITDSKGRTADARNAIFILTSNLEPG--GGVSYEEMEEGMKR 660 Query: 627 DAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQE 685 ++ + F PE NR+D I+ F L D + +++ K + E +L++ V+L +S E Sbjct: 661 RPRKKGLETFKPELINRIDEIVSFRPLDVDAVRRLLRKTLTETLAELERTHHVALRLSDE 720 Query: 686 ARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 A ++LA GY GAR + RV++ + PL+ +L G L + D + + Sbjct: 721 AEDYLARAGYSPEYGARELRRVVRQFIYVPLSRLILTGELKAHRRWLAVYDDDGITIV 778 >UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Bacteria RepID=C2MCW4_9PORP Length = 1011 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 260/690 (37%), Positives = 396/690 (57%), Gaps = 71/690 (10%) Query: 139 SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERA 198 S+ +S + ++ F TNLNQLA+ G +DP+IGR KELER Sbjct: 303 SNPFDLSAEGESGKEEKASKKSSKRSKTPALDAFATNLNQLAKDGKLDPMIGRAKELERI 362 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 +LCRR+KNNP+L+GE+GVGKTA+AEGLA + + +V + +YS+D+ +LAGT+ Sbjct: 363 THILCRRQKNNPVLIGEAGVGKTAVAEGLAQLLARDEVSYKLRGKVLYSVDLAQMLAGTR 422 Query: 259 YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRV 318 YRGDFE+RFKALLK+ E N+IL DEIHT++GAG+ G +DA+N++KP L+ G I+V Sbjct: 423 YRGDFEERFKALLKEAEMLGNTILLFDEIHTLMGAGSTE-GSMDASNMLKPALARGTIQV 481 Query: 319 IGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAV 378 IG+TT E+ EK+ ALARRFQK+ I + EET++I+ L+ +YE H V Y+ +A+ Sbjct: 482 IGATTLDEYRRTIEKNGALARRFQKVMIEPNTPEETLEILRQLRGRYEEFHHVHYSDEAL 541 Query: 379 RAAVELAVKYINDRHLPDKAIDVIDEAGA---------------------------RARL 411 A V L +YI DR+ PDKAIDV+DE GA R + Sbjct: 542 IAMVRLTNRYIYDRYFPDKAIDVLDEVGASMHLKGKLGESDKVASLRQQLRTYRASRDKA 601 Query: 412 MPVSKRKKTVNVADIESVVARIARIP-------------------------------EKS 440 + S + + E +V + + Sbjct: 602 VRESNYDTAMTLKVQEELVQKEVDEELEKAHAEEAGTYLPVDEEAVAKTVSMMSGVPISN 661 Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 +SQ + L+ + LK +V GQD AI + +AI+ R GLG + +P+GSFLF GPTGVG Sbjct: 662 ISQEEHAKLRQMRQTLKDIVIGQDDAINKVVKAIQRNRLGLGSDKRPIGSFLFLGPTGVG 721 Query: 501 KTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 KT + +L++ L + L+R DMSEYME VSRL+GA PGYVG+D+GG LT+ V + P Sbjct: 722 KTYLAKKLAELLFDDEDALIRIDMSEYMESFNVSRLVGAAPGYVGYDEGGQLTEQVRRKP 781 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI 617 ++V+L DE+EKAHPDV+NILLQ++D+G +T +G F+N V+++T+N G R+ + Sbjct: 782 YSVVLFDELEKAHPDVYNILLQILDDGFITAADGTHVSFKNTVIILTSNIGTRQLKDFGA 841 Query: 618 G--------LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 G L + +++KK F+PEF NRLD+ I+F L + I ++VD + + Sbjct: 842 GVGFRQEVQLSQTEQEALLSKQLKKHFSPEFLNRLDDTIYFASLEKEDIRKIVDVELRPI 901 Query: 670 QVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGG 729 ++ ++G +L V+ A++ LA+ G+D GARP+ R ++ ++ L + +L G G Sbjct: 902 MARITEQGYNLVVTPSAKDKLADVGFDLEYGARPLRRALRHWIEDKLTDLILDGEANVGD 961 Query: 730 QVTVALDKEKNELTYGFQ-SAQKHKAEAAH 758 V + + + + + + ++ KA++ Sbjct: 962 TVRLRVSEGELLMEVDKRLPQKESKAKSDE 991 >UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HM97_VITVI Length = 875 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 255/784 (32%), Positives = 404/784 (51%), Gaps = 85/784 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 + ++ + A+E++H+ + EHL+ ALL N AR VD L + Sbjct: 86 FTEMAWQAIVSSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKAGVDNTRLLDATD 145 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 FI++ V+ E + + ++QRA + + G + V+ ++++A +Q Sbjct: 146 KFIQRQPKVI---GESAGSMLGRDLESLIQRAREYKKEYGDSFVSVEHLVLAFVQDQR-F 201 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 L + ++S+ + + I + Q ++ G E +E + +L + Sbjct: 202 GKQLFKDFQISQKALKSAIEAIRGRQ----------QVIDQDPEGKYEALEKYGKDLTAM 251 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G +DP+IGR+ E+ R IQ+L RR KNNP+L+GE GVGKTAI+EGLA RIVQGDVP+ Sbjct: 252 AKAGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQA 311 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASG 298 + + + SLD+G+L+AG K+RG+FE R KA+LK++ E D +ILFIDEIHT++GAGA Sbjct: 312 LMNRKLISLDMGALIAGAKFRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGAT-N 370 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA NL+KP+L G++R IG+TT E+ EKD AL RRFQ++ + +P++E+T+ I+ Sbjct: 371 GAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISIL 430 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GL+ +YE HH VR + A+ A L+ +YI+ R LPDKAID++DEA A+ ++ SK Sbjct: 431 RGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPT 490 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKA------------ 466 + + ++ +D L L L +L Q + Sbjct: 491 ALDEINRSVLKLEMERLSLTNDTDKASKDRLSRLEAELSLLKEKQAELSEQWEHEKSVMT 550 Query: 467 -IEALTEAIKMARAGLGHEHKP----VGSFLFAGPTGVGKTEV---TVQLSKAL--GIEL 516 ++++ E I + + + L G + ++ +L + + G + Sbjct: 551 RLQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLENAEKELDEYMKSGKSM 610 Query: 517 LRF-----DMSEYMERHTVSRLIGA----PPGYVGFD-----------------QGGLLT 550 LR D++E + R I + P VG +GG LT Sbjct: 611 LREEVTGNDIAEIVSLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALEGGQLT 670 Query: 551 DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR 610 + V + P+AV+L DEIEKAH DVFN+ LQ++D+G +TD+ GR F N V++MT+N Sbjct: 671 ETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSN---- 726 Query: 611 ETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQ 670 M+ + IF PEF NR+D I F L D I +V + +Q Sbjct: 727 ---------------QRVMDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVKLQLERVQ 771 Query: 671 VQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ 730 ++L + + L+V++ A L GYD GARP+ RVIQ N++ LA +L G D Sbjct: 772 LRLADRKMKLQVTETAIQLLGSLGYDPNYGARPVKRVIQQNVENELAKGILRGEFKDEDT 831 Query: 731 VTVA 734 V + Sbjct: 832 VLID 835 >UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q6N1_MALGO Length = 853 Score = 557 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 259/841 (30%), Positives = 410/841 (48%), Gaps = 109/841 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS----------------AREALE 45 + SL AF A+++ H + H+ LALL++ + + E Sbjct: 6 FTDRAQNSLAAAFQLAKDYAHAQLAPSHIALALLNDDTSNSTGVQSTNKDSQSLFKSICE 65 Query: 46 ACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTG 105 V + L +L A + + PA + D T + ++++ A + + Sbjct: 66 KTGVSVPDLENKLRAALRKIPQQSPAPD---DVSLTGAASKIMKNAQQYKTQQRDAFIAQ 122 Query: 106 ANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG 165 +VL+A+ +S +L++ ++ D++ + G +S+ G Sbjct: 123 DHVLLALLE--DSSINNMLKEAGLANPDLMK---------NAITQARGGRHIDSKTAEAG 171 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 + M + T+L LA G +DP+IGR+ E+ R ++VL RR KNN +L+G GVGKTA+ E Sbjct: 172 YDAMGKYCTDLTALAAEGKLDPVIGRDNEIRRVVRVLSRRTKNNAVLIGSPGVGKTAVVE 231 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT----NSI 281 GLA R++ DVP + IYSLD+G L+AG KY+G++E+R KA+L +E+ T I Sbjct: 232 GLAQRVIDRDVPPNLLGK-IYSLDMGGLMAGAKYKGEYEERVKAVLSDIEKMTNDGTPCI 290 Query: 282 LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 LFIDE+H ++ AG +DAANL+KP+L+ GK+R IG+TT E+ EKD AL RRF Sbjct: 291 LFIDEMH-LMMAGKGGDTGMDAANLLKPMLARGKLRCIGATTLNEYRQSIEKDAALERRF 349 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 Q++ + EP++E+T+ I+ GL+ KYE HH VR AV +A +LA +Y+ R LPD AID+ Sbjct: 350 QQVIVEEPTVEDTIAILRGLREKYEVHHGVRILDAAVVSAAQLAKRYLTARKLPDSAIDL 409 Query: 402 IDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR------ 455 +DE+ A + + + + + + E+ ++ L+ Sbjct: 410 VDESCADVTVSRETVPEAIDTLERRKVRLQIAMTALEREKDPQSKERLEETRQELAHLDD 469 Query: 456 ----LKMLVFGQD---KAIEALTEAIKMARAGLGHEHK------PVGSFLFAGPTGV--- 499 +K Q + + I+ RA + +A P Sbjct: 470 ELAPMKAEFEAQRAKGDELNNVRRKIEELRAKASDAERRYDLETASDLMYYAIPDLEKRA 529 Query: 500 ---------------------------------------------GKTEVTVQLSKALGI 514 GKT ++ L+ + Sbjct: 530 EQLQEQARKDEAEGKTSQANTVTSENIASINRPIASFLFCGPSGTGKTLMSKTLASYMFD 589 Query: 515 E---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHP 571 + ++R D SEY E+H++SRLIGAPPGYVGFD+GG+LT+AV + P +++L+DEIEKA Sbjct: 590 DPDAMVRIDASEYSEKHSISRLIGAPPGYVGFDEGGVLTEAVRRRPFSIVLIDEIEKAAR 649 Query: 572 DVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE 631 + + LQV+D G L D+ GR FRN +++MT+N G + + Sbjct: 650 EFVQLFLQVLDEGRLQDSQGRLVSFRNTIIIMTSNLGSSFINESEDEDLTESVRQLVQGA 709 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVS--LEVSQEARNW 689 I F PEF NR+D+I+ F L + ++VD I ELQ +L + G L V +EA++W Sbjct: 710 ISAHFPPEFINRIDSIVTFRKLGRVDVRRIVDIRIKELQKRLIENGRQSRLVVDEEAKDW 769 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGG-QVTVALDKEKNELTYGFQS 748 L GY MGARP+ R IQD L PL+ +L G + + ++ ++ DK +N LT Sbjct: 770 LGSIGYSPTMGARPLGRAIQDQLLNPLSMLILRGQIHNDDPEIHISFDKYRNALTVQANH 829 Query: 749 A 749 Sbjct: 830 E 830 >UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=1 Tax=Ectocarpus siliculosus RepID=D1J7B8_ECTSI Length = 903 Score = 555 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 255/856 (29%), Positives = 426/856 (49%), Gaps = 111/856 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREA--LEACSVDLVALRQELE 59 + + M+ +R H F+ E +LL LL + +++ +R E+E Sbjct: 5 FTERALQVIMMSQEESRRLGHNFVGTEQILLGLLGEGCGVTINAVREYGINIRKVRIEVE 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + T + + T +++L+ ++ + + + ++ +A+ ++ + Sbjct: 65 RLIGKGTGFVAI-----EIPFTPRAKKILEMSIKQSKDLNHSYINTEHIFLALLNDTDGI 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEP--------------------TQSSDPGSQPNS 159 A +L+ + + ++I + ++ Q+ D + Sbjct: 120 CAKVLQNLGANIPRIKSYILNELDQNHEGSPKVLANVASGEQSSNPNIKQTKDLFLFDDL 179 Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 + + + +TT+L + A IDP++GRE E+ER IQ++ RRRKNNP+L+GE GVG Sbjct: 180 DPSSLTAPNLMEYTTDLTESAERAKIDPVVGRENEIERVIQIISRRRKNNPILIGEPGVG 239 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN 279 KTA+AEGLA RIVQ +VP + D I+ LDI LLAGTKYRG+FE+R K ++++L++ N Sbjct: 240 KTAVAEGLAQRIVQREVPSELHDYKIFVLDITLLLAGTKYRGEFEERLKRIVQELKEQKN 299 Query: 280 SILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 I+ IDE+HT++GAGAA G +DAAN++KP L+ G+++ IG+TT E+ EKD AL R Sbjct: 300 IIIVIDEVHTLVGAGAAEGA-LDAANILKPALARGELQCIGATTIDEYRQHIEKDPALER 358 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 399 RFQ + + EPSIEET+ I+ GL+ +YE HH + T +A+ AA L +YI DR LPDKAI Sbjct: 359 RFQPVWVNEPSIEETIAILKGLRLRYEQHHRLEITNEALVAAANLGAQYIADRFLPDKAI 418 Query: 400 DVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM- 458 D+IDE AR RL+ + + + + +++ L+ Sbjct: 419 DLIDEGSARVRLVNYRLPPAVQILDKELRRILEDKDLAVREQRFETATEIRDDELSLRSQ 478 Query: 459 --------------------LVFGQDKA-IEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 V QD A I AL + + + + + Sbjct: 479 MGAIIKASNTPIPKGVLERLKVGSQDIASIVALWTGVPVTKITKDENTRLLELENVLHQR 538 Query: 498 GVGKTE--------------------------------------VTVQLSKALG---IEL 516 +G+ E +T L+ + Sbjct: 539 VIGQKEAVSAVARAVRRARVGMRNMKRPIASFFFSGPTGVGKTELTKTLASFFFGAEDAM 598 Query: 517 LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNI 576 +R DMSE+MERHTV++LIG+PPGY+G+++GG LT+AV + P+ V+L DE+EKAHPDVFN+ Sbjct: 599 VRLDMSEFMERHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKAHPDVFNL 658 Query: 577 LLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKS-----IGLIHQDNSTD---- 627 LLQ++++G LTD+ GR DF+N +L+MT+N G + + +G + T Sbjct: 659 LLQILEDGRLTDSKGRIIDFKNTILIMTSNLGSKAIQDNDLSSQGMGFGGEKADTQKTKY 718 Query: 628 ------AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSL 680 E +K F PEF NR+D II F+ L+ I ++ + +L ++ +K ++L Sbjct: 719 AQLCNTVGESLKAFFKPEFLNRIDEIIVFEQLTKTNITEIAVIMVNDLIERVKKEKDITL 778 Query: 681 EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ----VTVALD 736 ++ L E+G++ GARP+ R + ++ ++ E L + + + V +D Sbjct: 779 SLTPRMMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVD 838 Query: 737 KEKNELTYGFQSAQKH 752 K +++ ++ Sbjct: 839 LNKVKVSISKTIIKEE 854 >UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax=Prevotella copri DSM 18205 RepID=D1PA52_9BACT Length = 892 Score = 554 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 261/824 (31%), Positives = 416/824 (50%), Gaps = 99/824 (12%) Query: 2 LNQELELSLNMAFARAREHRHE-FMTVEHLLLALLSNPS--AREALEACSVDLVALRQEL 58 +Q + + + A + H + HLLLA+L N L + + + Sbjct: 86 FSQITDSIIRDSIREANNYEHSKIVEPRHLLLAILRNDKNPVANWLSQLGLSYD---RAI 142 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E +EE +D + Q + + R E + ++ Sbjct: 143 EMLYPTDKDEEQKTEEPKDFKMEP------QTPDSEIPDADRQEEAENLEMAGGIEAEDD 196 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPN-SEEQAGGEERMENFTTNLN 177 D++ ++ ++PN + + ++ F+ +L Sbjct: 197 YNEQ---------NDMMETDEEPFDMEKDQNPMRLSTRPNGTPRKKSSTPTIDKFSFDLT 247 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 + A G +DP++GREKE++R +++L RR+KNNP+L+GE GVGK+AI EGLA I + Sbjct: 248 KAAAEGKLDPVVGREKEIQRVLEILGRRKKNNPVLIGEPGVGKSAIVEGLAQLINNQETS 307 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + + + SLD+ +++AGTK+RG FE+R K ++K+LE I+FIDEIHT+IGAG+ Sbjct: 308 PMFFNKRLVSLDLTAIVAGTKFRGQFEERIKNVIKELENHPEIIIFIDEIHTMIGAGSGE 367 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DAAN++KP L+ G I+ IG+TT E+ EKD AL RRFQK+ + + EET+ I Sbjct: 368 -GSMDAANILKPALARGIIQCIGATTLDEYRKSIEKDGALERRFQKVLVEPTTREETLLI 426 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 ++ +K YE HH VRYT +A+ A V+L +YI DRH PDKAIDVIDEAG+R + S Sbjct: 427 LHNIKQHYEKHHCVRYTDEALEACVKLTERYITDRHFPDKAIDVIDEAGSRVHINNASVP 486 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF-----GQDKAI----- 467 + + + + + + + ++ +++ + Q I Sbjct: 487 APYIKLEKELKKIISKKQQAVANQNFEMAASCRDAQTKIEKEIEDMKAQWQQGEIGEYVE 546 Query: 468 ---EALTEAIKMA------RAGLGHEHK-------------------------------- 486 E + I M R G + Sbjct: 547 VTAEDIANVISMMTGVPAQRMAEGESKRLKDLEHNLKHKVIAQDNAINKMVKTILRNRVG 606 Query: 487 ------PVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAP 537 P+G F+F GPTGVGKT + +L++ + L+R DMSE+ E SRL+GAP Sbjct: 607 LRDPNHPIGVFMFLGPTGVGKTYLAQKLAEEMFGSKDSLIRIDMSEFSESFNTSRLVGAP 666 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GG LT+ V + P++++LLDEIEKA+ VFN+LLQV+D G LTD NGR DFR Sbjct: 667 PGYVGYNEGGQLTEKVRRKPYSIVLLDEIEKANSKVFNLLLQVLDEGRLTDGNGRLIDFR 726 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQD----------------NSTDAMEEIKKIFTPEFR 641 N +++MT+NAG R+ + G+ + + + K F PEF Sbjct: 727 NTIIIMTSNAGTRQLKDFGRGVGFTSAGIKGGLAMDEKDKEYARSIVQKSLSKQFAPEFL 786 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 NRLD+II FD L + I +++D + L ++++ G +++++A+ +A+KGYD GA Sbjct: 787 NRLDDIITFDQLDLNAIKRIIDLDLEGLVKRIEELGFHFQITEKAKEMVAKKGYDVQFGA 846 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 RP+ R IQ ++ + LL G++ G ++V + +K ELT+ Sbjct: 847 RPLRRAIQTYIEDSVCEMLLDGTMKPGDTISVGKNSKKEELTFK 890 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 79/212 (37%), Gaps = 7/212 (3%) Query: 7 ELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEAFIEQ 64 + L + A ++VEHL+L+L+ ++ + L+ + +A L + +E+ Sbjct: 9 QDILKRSSKEAARTMGREISVEHLMLSLISQNDSDVNKLLKGADISPMAFSGVLNSKLEK 68 Query: 65 TTPVLPASE--EERDTQPTLSFQRVLQRAVFHVQSSGRNEV-TGANVLVAIFSEQESQAA 121 PA E + +++ ++ + +++ ++L+AI ++ A Sbjct: 69 RVEETPADNVKENTHIPFSQITDSIIRDSIREANNYEHSKIVEPRHLLLAILRNDKNPVA 128 Query: 122 YLLRKHEVSRLDVVNFI--SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 L + +S + + + + + + D +P + + + + NL Sbjct: 129 NWLSQLGLSYDRAIEMLYPTDKDEEQKTEEPKDFKMEPQTPDSEIPDADRQEEAENLEMA 188 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPL 211 + D + +E + + NP+ Sbjct: 189 GGIEAEDDYNEQNDMMETDEEPFDMEKDQNPM 220 >UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit clpL n=194 Tax=cellular organisms RepID=CLPL_STAAR Length = 701 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 263/688 (38%), Positives = 389/688 (56%), Gaps = 68/688 (9%) Query: 114 SEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE--EQAGGEERMEN 171 S Q S Y + EVS ++ F G + + +Q+G +E Sbjct: 24 SNQTSNKKYYINGKEVSPEELAQFTQQGGNHSAEQSAQAFQQAALRQQGQQSGNGNYLEQ 83 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 NL Q AR G +DP+IGR+KE++ +VL RR KNNP+LVGE+GVGKTAI EGLA I Sbjct: 84 IGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAI 143 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 V+G+VP + D I S+DI SL AGT+YRG FE+ + L++ ++ N++LF DEIH II Sbjct: 144 VEGNVPAAIKDKEIISIDISSLEAGTQYRGAFEENIQKLVEGVKSSQNAVLFFDEIHQII 203 Query: 292 GAG--AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 G+G + G ++++KP LS G+I +IG+TT E+ N KD AL RRF ++ + EP Sbjct: 204 GSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNIMKDAALTRRFNEVLVNEP 263 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 S ++TV+I+ G++ K+E HH V+ ++A V+L+++YI R LPDKAIDV+D A Sbjct: 264 SAKDTVEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHL 323 Query: 410 RLMPVSKRKKTVN----------------------------------------------- 422 + K T Sbjct: 324 SAQSPAIDKVTTEKRISELEHDKRKAVSAEEYKKADDIQKEIKSLQDKLENSNGEHTAVA 383 Query: 423 -VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 V DI + R+ IP + +D + LKN+ RL+ + GQDKA+E ++ AI+ RAG Sbjct: 384 TVHDISDTIQRLTGIPVSQMDANDIERLKNISSRLRSKIIGQDKAVEMVSRAIRRNRAGF 443 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPP 538 ++P+GSFLF GPTGVGKTE+ QL+ L L+R DMSEY + VS++IG Sbjct: 444 DDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMSEYSDTTAVSKMIGTTA 503 Query: 539 GYVGFDQ-GGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 GYVG+D LT+ V ++P++V+L DEIEKA+P + +LLQVMD+G LTD G +F+ Sbjct: 504 GYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFK 563 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDV 657 N +++ T+NAG G + D M E+KK F PEF NR + I+ F HL D Sbjct: 564 NTIIICTSNAG--------FGNGNDTEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDA 615 Query: 658 IHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 + +V+ + ++QV LD+KG++++VSQ+A++WL E+GYD +GARP+ R+++ ++ + Sbjct: 616 LQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKIT 675 Query: 718 NELLFGSLVDGGQVTVALDKEKNELTYG 745 + L + V +D E NEL Sbjct: 676 DYYLDHT----DVKHVDIDVEDNELVVK 699 >UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=D2QJP1_9SPHI Length = 828 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 238/828 (28%), Positives = 393/828 (47%), Gaps = 89/828 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQELEA 60 L + +E +L++A A ARE+ +E +T HLL A+L + L A D+ + + Sbjct: 6 LTEPVEKALHIARALAREYHNEQLTAAHLLRAVLHDDVGGSALLRALDQDVAYIFDWADV 65 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +IE+ ++ + S +RVL A F G + V VL A+ Sbjct: 66 WIEEQPR---SALAITEPLQDESVERVLNEADFFRVKLGLDYVELICVLTALTKPGVGFT 122 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A LR + D+++ T + + + + + A Sbjct: 123 AEQLRSFPLQERDLLDRFLRDLSTPRATDKTSSNGNGQAALPGLKTKGQFPYCIDKTAQA 182 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R +DP++GR++E+ +++L RR K N ++VG+ GVGK+A+ +GLA IV+G VP M Sbjct: 183 RAKKLDPVVGRKQEVRTMLEILGRRSKPNVMVVGDPGVGKSALLDGLAQLIVEGQVPARM 242 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + + LD G+LLAG Y+G+ E R K++LK++ Q ILFIDEIHT++ ++G Sbjct: 243 KNAILLELDSGALLAGASYKGEVEDRLKSVLKEVRQQEMCILFIDEIHTLLDPKGSAGNG 302 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 ANL+KP L+ G++ V+G+TT +E+ + E D+AL+RRF+ +++TEP+ + ++I G Sbjct: 303 --IANLLKPELARGELTVVGATTLEEYRKLIEPDQALSRRFELLNVTEPTEQVAERMIRG 360 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 L P YE HH + V A + LA +Y +R LPD A+D++D A R+ + + Sbjct: 361 LIPVYEQHHKLEIQPDVVAACIRLARRYSKERRLPDSALDLLDRTMAAIRIAIETSETEL 420 Query: 421 VNVADIESVVA--------------------RIARIPEKSVSQSDRDTLKNLGD------ 454 + ++ P + D + Sbjct: 421 TQLEKAVQELSQSDLPPGEALDEYRWIDTQLHHQISPVLLGNWEDTINPLEIETPAAYHD 480 Query: 455 ------RLKMLVFGQD---------KAIEALTEAIKMARAGLGHEHKPVGSFLF------ 493 R + GQ A+ A I M + + + + F Sbjct: 481 YIMAKLRRFRELAGQQVPVVTANDLVAVVAHKTGIPMGKVQGQEKERLLSMESFLQRRVV 540 Query: 494 --------------------------------AGPTGVGKTEVTVQLSKALGIE---LLR 518 GPTG GKTE++ L+ L + L+R Sbjct: 541 GQNHALRALSDAILESRSGLQRAGQPIGSFFLLGPTGTGKTELSKSLADFLFNDERALIR 600 Query: 519 FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL 578 FDMSE+ E H+ + L GAPPGYVG+++GGLL + + K P++V+L DEIEKAH VF++ L Sbjct: 601 FDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRKQPYSVVLFDEIEKAHGSVFDVFL 660 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTP 638 Q+MD G L D G++ DF N +L+ T+N S M + F P Sbjct: 661 QIMDEGRLHDKLGKEGDFTNALLIFTSNISSEWIT-NEFQAGRMPTSQQLMTRMTGQFRP 719 Query: 639 EFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRA 698 EF R+ II F + + + ++ + + LQ L Q+GV+L +++EA LA +G+ Sbjct: 720 EFLARITEIIPFSPIQEENVVRIFEIQLAHLQKSLVQQGVTLTLTKEANRQLALQGFSPH 779 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 GARP+A +I++ L++P++ L+ G L G + + +++ +EL + Sbjct: 780 YGARPLAGIIRNQLRRPISRLLISGQLQKGQSLNLDWNEQTSELIWQI 827 >UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit ClpA n=5 Tax=Proteobacteria RepID=A5WFU1_PSYWF Length = 854 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 351/821 (42%), Positives = 484/821 (58%), Gaps = 87/821 (10%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 ML++ LE+SL +A AR+ HE++TVEHLLLALL N +A L++C D+ +LR +LEA Sbjct: 1 MLSRHLEVSLRLAMTLARQKSHEYLTVEHLLLALLENNNAVTTLKSCGADISSLRSDLEA 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGR-NEVTGANVLVAIFSEQESQ 119 +I++ TP L A + E+ Q T F R+LQRA+FHVQS G V G+++LV++FSE ++ Sbjct: 61 YIDKHTPKLDA-DLEQTPQATQGFDRILQRAIFHVQSIGSGRLVQGSDILVSMFSEHDTY 119 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A YLL+K VSRL++ ++SHG DE + + + ++ + F NLN+ Sbjct: 120 AVYLLKKQGVSRLELTQYLSHGNEGDETREGPSDNEGADPKAARAKKDPLTEFAVNLNKR 179 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G DPLIGR E+ER QVLCRRRKNNPLLVG+ GVGKT+IAEGLAW I+ P+ Sbjct: 180 AAEGKTDPLIGRSSEIERTAQVLCRRRKNNPLLVGDPGVGKTSIAEGLAWLIINNKAPKP 239 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + C IYSLDIGSL+AGTKYRGDFEKR KALL +L++ N+ILFIDE+H IIGAG++ Sbjct: 240 LQGCVIYSLDIGSLIAGTKYRGDFEKRMKALLDELKKKPNAILFIDEVHMIIGAGSSMSS 299 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D +NLIKP L++G++R IGSTT+ E+ +FEKD AL+RRFQKID+ EPS++++++I+ Sbjct: 300 NMDVSNLIKPALANGELRCIGSTTFTEYRQVFEKDHALSRRFQKIDVNEPSVDDSIEILR 359 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLK +YE H+V+YT A+ +AV+L+ K+I++R LPDKAIDVIDEAGA RL + Sbjct: 360 GLKSRYEEFHNVKYTDAALVSAVQLSAKHIHERFLPDKAIDVIDEAGAYKRLGVTPDAAQ 419 Query: 420 TVNVADIESVV--------------------------ARIARIPEKSVSQSDRDTLKNLG 453 + + A + + ++ +D D L+++ Sbjct: 420 VEEENQLIDELNSTDVNAVDLNDDVLGNKTDYDAQIDADESGLDAEANDDNDDDALESVE 479 Query: 454 DRLKMLVFGQD------------KAIEALTEAIKM--ARAGLGHEHKPVGSFLFAGPTGV 499 + D + IEA+ + ++ + + V Sbjct: 480 SDFEDTDEALDDETQAAPTVIDVEDIEAIISKLARIPPKSVSNDDKSLLQHLERDLNRLV 539 Query: 500 -GKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD------- 551 G+ E LS A+ + ++ S + P G + L + Sbjct: 540 FGQDEAIKTLSDAIKLSRAGLKS---ADKPIGSFMFAGPTGVGKTEVSKQLANLMGIELI 596 Query: 552 --------------AVIKHPHA--------------------VLLLDEIEKAHPDVFNIL 577 +I P VLLLDEIEKAHPDVFN+L Sbjct: 597 RFDMSEYMEAHTASRLIGAPPGYVGFDQGGLLTEKINQHPHCVLLLDEIEKAHPDVFNLL 656 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFT 637 LQVMD+G+LTDNNGR A F+ V+L+MTTN G R S+G QD+S D E + ++FT Sbjct: 657 LQVMDHGSLTDNNGRVASFKQVILIMTTNVGAENISRSSMGFTKQDHSKDNTEAMNRVFT 716 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDR 697 PEFRNRLD II F+ L ++ VVDKF+VELQ QLD K V LE+ E R +LAEKGYDR Sbjct: 717 PEFRNRLDAIIQFNPLDPSIVVSVVDKFLVELQAQLDDKQVMLEIDDEVREYLAEKGYDR 776 Query: 698 AMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 MGARPM R+IQ+ +KKPLAN +LFG L +GG V V L ++ Sbjct: 777 LMGARPMQRLIQNEIKKPLANMVLFGDLAEGGAVHVTLSED 817 >UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacterineae RepID=A7HAC7_ANADF Length = 840 Score = 538 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 265/769 (34%), Positives = 384/769 (49%), Gaps = 54/769 (7%) Query: 11 NMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELEAFIEQTTPV 68 + A E + HLL+A+ + +A + L AC + L LR ++ + P Sbjct: 78 ERSREVAESVGAEEVDCLHLLIAMGRVRASAAHQLLGACGLQLSTLRNVALSYFTASMPR 137 Query: 69 L-----------------PASEEER----DTQPTLSFQRVLQRAVFHVQSSGRNEVTGAN 107 P E R D L L++A+ ++ V Sbjct: 138 RLRELQPVQVRPAQPLTPPRRSEPRARAADPSRDLQLDAHLEQALGDATATDGEAVHPER 197 Query: 108 VLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEE---QAG 164 + A + + D ++ G++ Sbjct: 198 GVSAAADTRSRGT-----TPPPTSTDAPEAAHPERSVSADAETRSRGTRARRSPHALDPK 252 Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 + NL +LA G +DPL+GRE+E+E AI VL +RR NNPLLVGE GVGKTAI Sbjct: 253 ELPWLSQLGRNLTELAAAGRLDPLVGREQEVEEAIDVLGKRRTNNPLLVGEPGVGKTAIV 312 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILF 283 EG+A R++Q + I +D+ S++AGT RG F ++ + +++ + ++F Sbjct: 313 EGIAQRLLQSA-----RERVIVEIDMASVVAGTSLRGAFSEKLLGIQEEVRRAAGRVVVF 367 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDEIHT++GAG A G DAAN +K L G+ IG+TT+ E+ EKD AL RRF Sbjct: 368 IDEIHTLMGAGQAGEGPQDAANELKAALGRGEFPCIGATTHDEYRQHIEKDPALERRFTP 427 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + + EPS+ +TV I+ GL P+YE HH VR+ A+ AA L+ +Y+ DR LPDKA+ +D Sbjct: 428 VLVREPSVADTVTILRGLAPRYEKHHRVRFADGALEAAASLSARYVTDRFLPDKAVSALD 487 Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 AG+RA ++ VA++A IPE + SDR+ + L L+ V G Sbjct: 488 LAGSRASRAGAAEVDAADV----ARTVAKMAGIPESRLLASDRERILGLEVALRDRVVGH 543 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFD 520 AI + +K AG +P+GSFLF GPTGVGKTE+ L+ AL L++ D Sbjct: 544 ADAIARVAAVLKRNFAGFAT-RRPMGSFLFLGPTGVGKTELARALADALYGAPDALVQLD 602 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MSE E V+RL+GA PGYVG+ +GG LTDAV + P +V++LDEIEKAH DV +LLQV Sbjct: 603 MSECAETTGVARLVGAAPGYVGYGEGGQLTDAVRRRPASVVVLDEIEKAHRDVQMLLLQV 662 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG-------LIHQDNSTDAMEEIK 633 ++ G LTD GR+ DF N V+V+T+N G E R S G Q + ++ + Sbjct: 663 LEEGRLTDGRGRQVDFSNAVVVLTSNLGAEEATRTSTGAMGFGAAERVQPRTDRVLQAAR 722 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAE 692 PE NRLD + F LS + + +V + +L ++ + E + A L E Sbjct: 723 GAVPPELWNRLDERVCFSPLSREDVAKVARLLVAGSSRRLEAERRIRFEATDGAIAHLVE 782 Query: 693 K-GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 G+D A+GARPM IQ ++ PLA +L G L G V +D Sbjct: 783 NGGFDAALGARPMRGAIQRLVEAPLAERILAGELGPGDVAIVDVDAAGG 831 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 17/164 (10%) Query: 5 ELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS-AREALEACSVDLVALRQELEAFIE 63 EL + A A + + +T H LLA + P+ A L+ +D L + Sbjct: 9 ELAQVIAEAADIAASVKQK-LTSAHQLLAFFTVPNRAEILLKERGIDEDRLLAAMTG--- 64 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 + +P + + +R+ +S G EV ++L+A+ + S A L Sbjct: 65 ------------KPKEPEGVLRDLRERSREVAESVGAEEVDCLHLLIAMGRVRASAAHQL 112 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEE 167 L + + N P + + Q Sbjct: 113 LGACGLQLSTLRNVALSYFTASMPRRLRELQPVQVRPAQPLTPP 156 >UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KIW5_TOXGO Length = 983 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 268/862 (31%), Positives = 404/862 (46%), Gaps = 122/862 (14%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS---NPSAREALEACSVDLVALRQEL 58 L+ A +H ++ HL+ LL + + ALE LR+++ Sbjct: 100 FTDAASDLLDCVEQLAWMLQHPELSRVHLVACLLDMPGDTTVPTALEKAGGKSADLRKDM 159 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + + + + +RV+ A QS G V +++ A+ Sbjct: 160 HNLLIRMPQSVTPLSYGEARSRS-ELKRVIIDAYNEAQSRGHRLVGVHDLVTALARCDRF 218 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 +A L + ++ + + + G +E ++ F ++ + Sbjct: 219 RAR--LANVGTDVSVFLKLVTSAFIVHTEAEERKA-----TPARTGSQEWIKTFGVDMTE 271 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A+ G I + GRE E+E+ V+ R K N LL+GE GVGKTA+ EGLA RIV GDVP+ Sbjct: 272 QAKEGKIGTVTGREAEIEQITSVMSRMSKANCLLIGEPGVGKTAVVEGLAKRIVDGDVPD 331 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEIHTIIGAGAAS 297 + ++SLD+GSLL+G+ RG+FE+R K +L L S ILFIDEIHT++GAG A Sbjct: 332 ALLGVQVFSLDVGSLLSGSSMRGEFERRMKGILDYLFASDRSTILFIDEIHTLMGAGKAD 391 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DAANL+KP L+ G +RVIG+TT E+ E+D A ARRF I++ EP + +T+ + Sbjct: 392 GP-MDAANLLKPALARGALRVIGATTRAEYRKHIERDMAFARRFVTIEMKEPDVAKTITM 450 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA---------- 407 + G++ E HH + T A+ AA L+ +YI R LPDKAID+ID+A A Sbjct: 451 LKGIRKNLENHHKLTITDGALVAAATLSDRYIKSRQLPDKAIDLIDDACAIKKVKSLRRL 510 Query: 408 -------------------------------------RARLMPVSKRKKTVNVADIESVV 430 A + ++ + AD+ VV Sbjct: 511 MNERAANEEKNDNGGSGDASSSANGDGEKKRDDLEKLEAEIAKEAEDADALTDADVADVV 570 Query: 431 ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGS 490 + IP ++++DR L +L L+ V GQ++A+EA+ AI +RAGL + P+G+ Sbjct: 571 SLRTGIPVNKLTETDRQRLLSLPASLQAQVIGQEEAVEAVANAIIRSRAGLARRNAPIGT 630 Query: 491 FLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 FLF G TGVGKTE+ L+ A+ L+R DMSEY E HTV+RL+G+PPGYV D+GG Sbjct: 631 FLFLGSTGVGKTELAKALTAAIFHDEKNLIRLDMSEYSEPHTVARLVGSPPGYVSHDEGG 690 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 607 LT+AV + PH+V+L DEIE AHP+VF LLQ++D G LTD G DF N V++ T+N Sbjct: 691 QLTEAVRQRPHSVVLFDEIENAHPNVFAYLLQLLDEGRLTDMRGITVDFTNCVIIATSNI 750 Query: 608 GVRETERKS----------IGLIHQDNSTDAMEEI-----------------KKIFTPEF 640 G + S + + H D+ +E I K +P Sbjct: 751 GAKHILAASEKAGDEASGKVTIGHFDSERQQLEHIADANAGAQVAEEVNGDKKDSTSPAQ 810 Query: 641 RNRLDNIIWFDH---------------LSTDVIHQVVDKFIVELQV-------QLDQKGV 678 L + V++++ L +L QKG+ Sbjct: 811 EKALARKKVANWKTQARAAVLAEAARVFKPQVLNRMTVIIFDPLTPQDLKRIFRLQQKGL 870 Query: 679 ---------SLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGG 729 L V ++A ++ E+ Y R GAR + R N+ LA +L G L G Sbjct: 871 ADLLSEQRIDLVVEEDAVTFVVERAYSRHFGARRLKRFFDKNITGRLAPWILSGWLRSGM 930 Query: 730 QVTVALDK-EKNELTYGFQSAQ 750 + + + K KN L Sbjct: 931 MLRIIVSKTRKNSLEAHICDVN 952 >UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3229B Length = 761 Score = 527 bits (1356), Expect = e-148, Method: Composition-based stats. Identities = 247/660 (37%), Positives = 366/660 (55%), Gaps = 77/660 (11%) Query: 163 AGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTA 222 ++ F +L + ARVG ID +IGR+ E+E+ I+VL RRRKNN +L+GE+GVGKTA Sbjct: 100 DSSTPTLDQFGRDLTEDARVGRIDAVIGRDDEIEQTIEVLARRRKNNAVLIGEAGVGKTA 159 Query: 223 IAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSI 281 IAEGLA RI + +VPE + + I S+D+G ++AG ++RG FE+R K L+++ D + Sbjct: 160 IAEGLALRIARNEVPETLREVRIVSVDLGGMVAGAQFRGQFEQRLKTALEEVVATDGKVV 219 Query: 282 LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 LFIDE+HTI+GAG A G +DAANL+KPLL+ G++RV+G+TT E+ EKD ALARRF Sbjct: 220 LFIDELHTIVGAGGAEGA-MDAANLLKPLLARGELRVVGATTLAEYRK-IEKDGALARRF 277 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYT---------------------AKAVRA 380 + + EPS+E TV I+ GL+P YE HH V+ KA+ Sbjct: 278 AAVHVEEPSVEATVAILRGLRPAYEEHHGVKIADAALDAAARLSDRYVTEYHLPDKAIDL 337 Query: 381 AVELAVK------------------YINDRHLPDKAIDVIDEAGARARLMP--------- 413 + + + Y+ + ++A + + Sbjct: 338 MDQASARVHLHGERSDVARLQRELHYLQAEKQAAVDAEAYEDAADLRKRIDGVEQQLAAL 397 Query: 414 -------------VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 V D+ +VVA IP + + + L+ L L V Sbjct: 398 AADGADAASSTGDTGTASLAVTETDVAAVVAARTGIPVGELVAGELEKLQELEADLHARV 457 Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELL 517 GQD A+E + + I+ AR GL +P+G+FLF GPTGVGKTE+ LS+ L L+ Sbjct: 458 VGQDGAVETVADTIRRARVGLSEGDRPLGTFLFLGPTGVGKTELVKALSERLFGTEKSLV 517 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 R DMSE+ E HTV+RLIG+PPGYVG+ GG LT+ V + P++V+LLDEIEKAHP+V+N+L Sbjct: 518 RIDMSEFREPHTVARLIGSPPGYVGYGDGGQLTEPVRRRPYSVVLLDEIEKAHPEVWNVL 577 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS-------TDAME 630 LQVMD+G LTD GR DF N VLVMT+N G +++++++G D + Sbjct: 578 LQVMDDGRLTDGEGRTVDFANTVLVMTSNLGAPKSKKQALGFATSDGEGERGDVAAQMVA 637 Query: 631 EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD-QKGVSLEVSQEARNW 689 K+ F PEF NR+D ++ FD LS + + ++ + + ++ +L ++ + LEV + Sbjct: 638 AAKRAFLPEFVNRIDELVVFDALSAEQVERIGELIVERVEERLASERDIELEVEPKLIAR 697 Query: 690 LAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 L+ +G+D GARP+ R ++ L+K L ++ G L DG V + + A Sbjct: 698 LSREGFDPEYGARPLQRHVRRTLEKELTKAIVEGRLNDGD--RVVASDAGGAIALAIEPA 755 >UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GY73_PARBA Length = 732 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 244/663 (36%), Positives = 365/663 (55%), Gaps = 69/663 (10%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 G+ + + +E + +L A+ G +DP+IGR+ E++R IQ+L RR KNNP+L+ Sbjct: 71 GTHRMNMGGEPEKSALEEYGVDLTARAKDGKLDPVIGRDGEIQRTIQILSRRTKNNPVLI 130 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 G +G GKTAI EGLA RIV+GDVPE + + + SLD+G L+AG K+RGDFE+R K +LK+ Sbjct: 131 GSAGTGKTAILEGLAQRIVRGDVPESVKNKRVISLDLGQLIAGAKFRGDFEERLKKVLKE 190 Query: 274 LEQD-TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFE 332 +E+ ILF+DE+HT++G G A G +DA+NL+KP LS G+++ G+TT E+ E Sbjct: 191 VEEAQGGVILFVDELHTLLGLGKAE-GSIDASNLLKPALSRGELQCCGATTLNEYRQ-IE 248 Query: 333 KDRALARRFQKIDITEPSI-----------------------------------EETVQI 357 KD ALARRFQ I + EPS E+ ++ Sbjct: 249 KDVALARRFQPIVVEEPSESKPDAIQELDRQIMTIQIELESLRKETDIPSKERREKLEEL 308 Query: 358 INGLKPKYEAHHDV----RYTAKAVRAAVELAVK---------------------YINDR 392 + + + + DV + A++ A E + Y Sbjct: 309 LKTKQDEVKEFTDVWEKEKAELDAIKQAKEDLERARVDLEQAQREGNFAKASELRYSIIP 368 Query: 393 HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNL 452 L +K + V +V DI VV+R IP + + + L ++ Sbjct: 369 KLENKLPKEGSDTATSTTADGVVLLHDSVTSDDIAGVVSRTTGIPVNKLMAGEVEKLIHM 428 Query: 453 GDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 D L+ V GQD+A+ A+ A++M RAGL E++P+ SF+F GPTGVGKTE+ +++ L Sbjct: 429 EDTLRQSVRGQDEALCAVANAVRMQRAGLSGENRPLASFMFLGPTGVGKTELCKKMAGFL 488 Query: 513 GI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA 569 +LRFDMSE+ E+HTVSRLIG+P GYVG++ G LT+AV + P+AVLL DE EKA Sbjct: 489 FSTESAVLRFDMSEFQEKHTVSRLIGSPAGYVGYEDAGQLTEAVRRKPYAVLLFDEFEKA 548 Query: 570 HPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQ---DNST 626 H D+ +LLQV+D G LTD G K DFRN ++V+T+N G L + + + Sbjct: 549 HRDISALLLQVLDEGFLTDAQGHKIDFRNTLIVLTSNLGAEILVGSDPTLGEEVSTEIKS 608 Query: 627 DAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEA 686 M ++ + PEF NR+D I F LS + +VD + ELQ++LD + ++L+V Sbjct: 609 AVMATVQTSYPPEFLNRIDEFIIFKRLSRKALRDIVDIRLRELQLRLDDRRITLKVDDGV 668 Query: 687 RNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 + WL +KGYD GARP+ R+I + LA++++ G + G V L+ +K+ L Sbjct: 669 KGWLCDKGYDPRYGARPLNRLIAKEIGNRLADKIIRGQVTTGQVAHVTLNADKSGLNVAT 728 Query: 747 QSA 749 + A Sbjct: 729 EEA 731 >UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KUA3_TOXGO Length = 970 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 261/892 (29%), Positives = 419/892 (46%), Gaps = 140/892 (15%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREA--LEACSVDLVALRQEL 58 ++++ L+ A A RH +T H L LL LE C ++ L++ + Sbjct: 60 ISRDARDQLDQAEVLAMYMRHRQITPVHFLTVLLEVQGEFSIVRSLEQCGANVYELKKAM 119 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + + P E + + T +RV RA+ Q + + +++ ++F E Sbjct: 120 SNVLIK-LPTSADVEIVDELESTPQLKRVALRALEIAQKDKKQTIGMEHLITSLFEENNL 178 Query: 119 QAA--------YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERME 170 + + + +H + + +R + + + ++ A EE ++ Sbjct: 179 RKSLEQAGCNVKVFLEHSTTMYENKFKQDVASRSMKKQPTEGSPATSRAKPDASDEEFVQ 238 Query: 171 NFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWR 230 +F ++ +LA G ++P++GR KE++ + VL R+ K NP LVGE GVGKTA+ EGLA R Sbjct: 239 SFGVDMTKLAAEGKLEPVVGRNKEIKEVLTVLSRKGKGNPCLVGEPGVGKTAVVEGLAQR 298 Query: 231 IVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLK-QLEQDTNSILFIDEIHT 289 +V+G VP+ + + ++++D+G+L+AG YRG+FEKR KAL++ + Q+ ILFIDE+H Sbjct: 299 LVEGMVPKSLENKILFAVDLGALIAGATYRGEFEKRMKALIRYAVNQEGRVILFIDELHM 358 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 ++GAG + G +DAANL+KP ++ G+IR++G+TT +E+ I EKD A+ RR + I I EP Sbjct: 359 LMGAGKSD-GTMDAANLLKPPMARGEIRLVGATTQEEY-KIIEKDAAMERRLKPIFIEEP 416 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 S + + I+ L K+E+HH+++ + +A+ AAV L+ KYI +R LPDKAID++DEA A Sbjct: 417 STDRAIYILRKLSDKFESHHEMKISDEAIVAAVMLSHKYIRNRKLPDKAIDLLDEAAATK 476 Query: 410 RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLG---------------- 453 R+ R + +E + + V Q D+ ++ Sbjct: 477 RVKWD-LRSLNDDEVAMERKNSEQFEEETRKVEQQDQQRIEKQNHGDGTEEELKNLEKEI 535 Query: 454 -----DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK---------------------- 486 + LV D + ++ + A L + K Sbjct: 536 EEQSLHEKQELVLTADDVAQVISLWTGIPLAKLTDDEKSKILRLSDLLHSRVIGQDDAVK 595 Query: 487 ------------------PVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYM 525 PVGSFLF GPTGVGKTE+ L+ + L+R DMSE+ Sbjct: 596 AVADAMVRARAGLSREGMPVGSFLFLGPTGVGKTELAKALAMEMFHSEKNLIRIDMSEFS 655 Query: 526 ERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGT 585 E H+VSRLIG+PPGYVG D GG LT+AV + PH+V+L DEIEK H + NI+LQ++D G Sbjct: 656 EAHSVSRLIGSPPGYVGHDAGGQLTEAVRRRPHSVVLFDEIEKGHQQILNIMLQMLDEGR 715 Query: 586 LTDNNGRKADFRNVVLVMTTNAGVRET--------------------------------- 612 LTD G DF N V+++T+N G + Sbjct: 716 LTDGKGLLVDFTNCVIILTSNVGAQYIISAYEQAEKESKTALATFDPKSGNLEQFAEAAK 775 Query: 613 --ERKSIGLIHQDNSTDAMEEIKKI------FTPEFRNRL-DNIIWFDHLSTDVIHQV-- 661 E S G D + + E R ++ I L +V+++ Sbjct: 776 GAEAASEGDDSSSEKKDKKGAVLDKNKKSGNWKKEARRKILSEIAGSGLLKPEVVNRFSG 835 Query: 662 -----------VDKFIVELQVQLD----QKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 V K + L +KG+ L + A ++ ++ Y GARP+ R Sbjct: 836 VIIFEPMNPADVRKILAIQSKDLKNALQRKGIELVIDASAEEFIVQRSYTHKFGARPLKR 895 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDK-EKNELTYGFQSAQKHKAEAA 757 + +++ +A +L G L G +VTV K KN L K + A Sbjct: 896 FVDNHIGAKMAPWILSGYLQPGMRVTVVASKRNKNTLEAHVCKVVMGKCDRA 947 >UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus RepID=A8YTL4_LACH4 Length = 707 Score = 517 bits (1330), Expect = e-145, Method: Composition-based stats. Identities = 246/704 (34%), Positives = 389/704 (55%), Gaps = 61/704 (8%) Query: 110 VAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERM 169 +A F L + + + SS+ S P + +Q + Sbjct: 1 MAYFDNDFDTLFNELNSSFFNDDFGRRSGNGNSGSIPINYSSNMSSAPQTIQQNPQQPNE 60 Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAW 229 + +L + A+ DP+IGR+++++ I++L RR+KNNP+L+G +GVGKT+I EGLA Sbjct: 61 KPIGVDLVEEAKKNNFDPVIGRDEQIDNVIEILSRRKKNNPVLIGPAGVGKTSIVEGLAE 120 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHT 289 RI G+VP MA+ I S++I ++AG+ RG FE+R K ++ + + D N +LFIDE+H Sbjct: 121 RIASGNVPAKMANMHIISVNINDMVAGSSLRGSFEERLKKVIDKAKSDPNIVLFIDELHN 180 Query: 290 IIGAGA--ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 I+GAG+ + DAAN++KP L++G +++IG+TT EF EKD AL+RRFQ + + Sbjct: 181 IVGAGSTDSENNNGDAANILKPALANGDLKLIGATTTSEFQR-IEKDPALSRRFQAVQVP 239 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EP+ + ++I+ GLK KYE +H V+Y+ +++ AVEL+ +YI R+LPDKAID++DEAGA Sbjct: 240 EPTTDVAIKILKGLKKKYEDYHHVKYSDDSLKLAVELSERYIQGRYLPDKAIDLMDEAGA 299 Query: 408 RARL------------------------------------------------MPVSKRKK 419 + L +K Sbjct: 300 KKALLVQPTDEKNLKNQISALEAKKSEAAKAEDYDKAGEIKTKIAELEKQLKNVDTKNIP 359 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 V DI +++ + +IP + + +L +LK V QD+AI+ +T+AI + Sbjct: 360 EVTEKDIYAIIEQKTKIPMSELHADEAQKNLDLAKKLKKNVIDQDRAIDVITDAIARKQI 419 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGA 536 +P GSFL GPTGVGKTE+ QL+ L L+R DMSEY + V++LIG+ Sbjct: 420 F-KDSDRPTGSFLLTGPTGVGKTELAKQLAIQLFGNKDHLIRLDMSEYQDEMAVNKLIGS 478 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 PGYVG+ +GG LT+ V P++++L DEIEKA+P VFN LLQ+MD+G LTD GR F Sbjct: 479 APGYVGYGEGGQLTEKVRHQPYSLILFDEIEKANPQVFNALLQIMDDGRLTDAQGRTVSF 538 Query: 597 RNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 ++ +L+MT+NAG + + + + + ++ F PEF NRLD I+ F+ L+ Sbjct: 539 KDTILIMTSNAGFSDKLLED----GKVDQDKLISALENYFRPEFLNRLDAIVPFNSLTEQ 594 Query: 657 VIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPL 716 + ++++ ++ ++ L +KGV++EVS EA+N+LAEKGYD+ GARP+ RV++ NL+ P Sbjct: 595 DMGKIINIYLKKMSHVLAKKGVTVEVSDEAKNFLAEKGYDKKFGARPLRRVVEQNLETPA 654 Query: 717 ANELLFGSLVDGGQVTVALDK--EKNELTYGFQSAQKHKAEAAH 758 A +L + T + + + K + Sbjct: 655 AKLILREPDTKKIEFTADDKHLYLNGKAIFDISPKVEEKVKEDE 698 >UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=A3A5U3_ORYSJ Length = 691 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 211/619 (34%), Positives = 339/619 (54%), Gaps = 22/619 (3%) Query: 151 SDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNP 210 DP P + A + ++ F +L A DP++GRE+E++R + +L R+ KN+ Sbjct: 37 KDPPPPPPPRQPAAAKGTLDAFGRDLTAEAANA--DPVVGREEEIDRVVCILSRKSKNSA 94 Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +LVG +GVGKTAIAEGLA RI +G+V V+ + L++ ++++GT YRG FE+R + Sbjct: 95 VLVGAAGVGKTAIAEGLAQRIARGEVSGVLEGARVVELNVAAMISGTSYRGTFEERMTGV 154 Query: 271 LKQLEQD-----TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQ 325 + + E + +LF+DEIH ++GAG SGG +DA+N++KP L+ G++R +G+TT+ Sbjct: 155 IAEAEAEADAAAGKVVLFVDEIHMLLGAGRVSGGCIDASNMLKPALARGRVRCLGATTHD 214 Query: 326 EFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 385 E+ +D A RRFQK+ + EPS+++TV I+ LKP Y+ HH Sbjct: 215 EYHRYMVRDAAFERRFQKVHVAEPSVDDTVAILRRLKPSYQDHHAWISRTPPSSPPPSSP 274 Query: 386 VKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSD 445 V L D+A R + + +A+ IP S+ + + Sbjct: 275 VATSQAIDLVDEACATARLLMDRRKKKQAQAAVAPKDENVGPDHIAQWTGIPVASLGEDE 334 Query: 446 RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVT 505 R L L L V GQD+A+ A+ EA+ +R+GLG+ ++P GSFLF GPTGV KTE+ Sbjct: 335 RKKLLELPQLLHRRVIGQDEAVGAVAEAVVRSRSGLGNPNQPSGSFLFLGPTGVSKTELA 394 Query: 506 VQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLL 562 L++ L L+R DMSEY+ +V+RLIG+ PG G+D+GG LT+ V P++V+L Sbjct: 395 KALAEQLFGNAKLLVRIDMSEYVNASSVTRLIGSAPGTNGYDKGGQLTELVRCRPYSVVL 454 Query: 563 LDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI----- 617 DE+EKA VFN+ LQ++D+G LTD GR DF N +++MT+N G + + Sbjct: 455 FDEVEKADAAVFNVFLQILDDGRLTDGQGRTVDFTNTIIIMTSNLGAQHLADAAAADASH 514 Query: 618 -----GLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ 672 + ++++ F PE +RL ++ F LS + + +V + + + Sbjct: 515 KDDATEAAAAAAKQRVLADVQRHFRPELISRLTEMVVFRPLSGEQLRKVARLQLRGMAAR 574 Query: 673 LDQKGVSLEVSQEARNWLAEKGYD--RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ 730 L +KG+ L+V+ A + + + D RA GARP+ R ++ ++ ++ ++ D Sbjct: 575 LAEKGIGLDVANAALDVVLARSSDQVRAYGARPIKRCLEKDVMTRISKMVVQEEADDDCY 634 Query: 731 VTVALDKEKNELTYGFQSA 749 VTV D+ K EL + Sbjct: 635 VTVEADQGKEELVFTVDKQ 653 >UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1 Tax=Sorghum bicolor RepID=C5YMW4_SORBI Length = 818 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 227/721 (31%), Positives = 362/721 (50%), Gaps = 89/721 (12%) Query: 58 LEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQE 117 ++ ++ + + + A Q ++ + + Sbjct: 157 IDLRRQRGQKNSRLVTRATLNSFSGEVKNIFALAQEETQ----------HLAL------K 200 Query: 118 SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 S + + + + TR ++ + + ++ + T+L Sbjct: 201 SGISQVFQIINGRVRRGSSESPLKTRSNDDSLEKRSSKTCAETKNKISTPTLDEYGTDLT 260 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 LA G +DP+IGR+K++++ +Q+L R+ KNNP L+GE GVGKTA+ E LA I GDVP Sbjct: 261 TLANKGKLDPVIGRQKQIDQVVQILSRKGKNNPCLIGEPGVGKTAVVESLAQLIAMGDVP 320 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 E M +HT++GAGAA Sbjct: 321 ETMQGKKFT----------------------------------------LHTLVGAGAAV 340 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DAAN++KP L+ G+++ IG+TT + EKD AL RRF+++ + EP +EE ++I Sbjct: 341 EGAIDAANILKPALARGELQCIGATTTDGYMKHIEKDPALERRFRQVKVPEPMVEEAIEI 400 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + GL+ +YE HH V+Y +A+ AA EL+ KYI+DR LPDKAID+IDEAG+ RL ++ Sbjct: 401 LKGLRERYETHHKVQYADEALSAAAELSHKYISDRFLPDKAIDLIDEAGSLVRLRH-AQP 459 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR---------------------- 455 K + D + + +I + ++ + K L DR Sbjct: 460 KLPKELQDFVTEIKKITKEKCDTIRIENFKKAKELRDRELELKSQLTTTLQIGNDEDGGG 519 Query: 456 LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG-- 513 L + GQD+A+ A++ AI+ AR GL +P+ SF+FAGPTGVGK+E+ ++ Sbjct: 520 LHRRIIGQDEAVTAVSRAIRRARVGLSDPRRPIASFVFAGPTGVGKSELAKAVAAYYYGS 579 Query: 514 -IELLRFDMSEYMERHTVSRLIGAPP-GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHP 571 ++R DMSE ME+H V+RL+GAPP + GG LT+AV + PH+++LLDE++KAHP Sbjct: 580 EDAMVRLDMSELMEKHAVARLVGAPPGYVGHGEGGGQLTEAVRRRPHSLVLLDEVDKAHP 639 Query: 572 DVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE 631 +V ++LLQV+D+G LTD GR DFRN +++MT+N G + EE Sbjct: 640 EVMDVLLQVLDDGRLTDGMGRTVDFRNTLIIMTSNIGGGNGGSGDG--SRSSSKEVVEEE 697 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKG---VSLEVSQEARN 688 +K+ F PEF NRLD I F L+ ++ + ++ ++ ++ V L V++ + Sbjct: 698 MKRYFRPEFLNRLDETIVFRPLTRVDGKEIAAVLVSDVAARVSRETMMVVELRVTERFMD 757 Query: 689 WLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSL-VDGGQVTVALDKEKNELTYGFQ 747 + E+G+D GAR + R + L+ LA++LL G + G V V D N + G Sbjct: 758 LVVEEGFDPWYGARALRRAVVMLLEDTLADKLLDGEIVKAGDTVIVDADAAGNVVVLGPD 817 Query: 748 S 748 S Sbjct: 818 S 818 >UniRef50_Q7RAR9 ATP-dependent Clp protease, ATPase subunit-related n=2 Tax=Plasmodium (Vinckeia) RepID=Q7RAR9_PLAYO Length = 1122 Score = 497 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 223/846 (26%), Positives = 402/846 (47%), Gaps = 137/846 (16%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS------NPSAREALEACSVDLVALR 55 ++ +L L A A++ F+ + +L+++++ + L ++ L L+ Sbjct: 283 FSENCKLVLQNAILEAKKKNKIFVNLTDILISIINIAQENKECDFVKYLNELNISLSDLK 342 Query: 56 QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE 115 +++ + E L + +E N Sbjct: 343 KQVTNYDENN------------------LNSNLIHCPINKNPIKNDEEQDGN------KN 378 Query: 116 QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 + + + +++N +++ E ++ + + ++ + Sbjct: 379 LNNYSDKQNKNMTDQPNNIINNMNNEYINQEKYFKNNEDNNFTQNNKFMSSIITKDCLVD 438 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 + Q A ++ GR+ E++R I++L R++K+NPLLVGE+GVGKTAI E LA+ I++ Sbjct: 439 MVQQAYEKKLENFFGRKDEIKRIIEILGRKKKSNPLLVGETGVGKTAIVEQLAYLILKNK 498 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VP + +C I+ +++G+++AGTKYRG+FE++ K +L + +D +ILFIDEIH I+GAG+ Sbjct: 499 VPYHLKNCKIFQMNLGNIVAGTKYRGEFEEKMKQILANISKDKKNILFIDEIHVIVGAGS 558 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 G +DA+N++KP LSS ++ IG+TT+QE+S E D+AL RRF ++I + ET Sbjct: 559 GE-GSLDASNILKPFLSSDNLQCIGTTTFQEYSKYIETDKALRRRFNCVNIKPLNSNETY 617 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP-- 413 +++ +K YE +H++ YT +A+++ + L+ Y+ + PDKAID++DEAG+ ++ Sbjct: 618 KLLKKIKNSYEQYHNIYYTDEALKSIILLSDDYLPTLNFPDKAIDILDEAGSYQKIKYER 677 Query: 414 ---------------------------------------------VSKRKKTVNVADIES 428 K V IE+ Sbjct: 678 YITKKLRNENNIKTDSIKVSTNTNSNKIDNNSTNVTSQIESNYLVDDLHMKYVTSDVIEN 737 Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 +V++ + I ++ + + ++NL ++L ++ GQ+K I+ L + + A + +KP+ Sbjct: 738 IVSKKSSISFIKKNKKEEEKIQNLKEKLNKIIIGQEKVIDILAKYLFKAITNIKDANKPI 797 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALG--IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 G+ L G +GVGKT +S+ L ++ +MSEY+++H+VS+L G+ PGYVG+ +G Sbjct: 798 GTLLLCGSSGVGKTLSAQVISQYLFNDDNIIVINMSEYIDKHSVSKLFGSYPGYVGYKEG 857 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G LT+AV K P +++L DEIEKAH DV ++LLQ++DNG LTD+ G K F+N + MTTN Sbjct: 858 GELTEAVKKKPFSIILFDEIEKAHSDVLHVLLQILDNGLLTDSKGNKVSFKNTFIFMTTN 917 Query: 607 AGVRET-----------------------------------------------------E 613 G E Sbjct: 918 VGSDIITDYFKVYNKNYANFGFKYYTQKEKIEKPDLQNSTNNNTQNDKDKIQTDLDIFEE 977 Query: 614 RKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL-QVQ 672 + + + + EE+KK F PEF NR+D I F I Q+++ I +L + Sbjct: 978 KIKTNKWYDELKPEIEEELKKKFLPEFLNRIDEKILFRQFLKRDIIQILENMIQDLKKRI 1037 Query: 673 LDQKGVSLEVSQEARNWLA---EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGG 729 +K +++ + ++ YD GAR + R + ++ P+A L+ Sbjct: 1038 KKRKKLNILIDDNIIKYICSDENNIYDINFGARSIRRALYKYIEDPIAAFLISNEYNPND 1097 Query: 730 QVTVAL 735 + + L Sbjct: 1098 TMHLTL 1103 Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 79/221 (35%), Gaps = 10/221 (4%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEA 60 ++ +L MA A+ + + ++HLL+A++ S + ++ L + Sbjct: 57 DENCIKALIMAREVAKNNNENEVLLKHLLVAIIKTDSHIIDHIFKYFNISLQHFINKFNT 116 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 I + +E D Q Q+ + E T N ++ + E Sbjct: 117 EIAKN-SFKKTGQEPYDNNHIPPEQIEFQKC---STKNNDQEKTLINNIIGNKIKDEEYN 172 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 + + K+ T+S+ S + + E + + +++ N++ Sbjct: 173 HIVTNNL---DKEATKNNDTEASKNNSTESTKDNSTEATNNENCESEHVTDVSSSYNKMQ 229 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 G L EK+ ++ + ++ + P LV ++ GK Sbjct: 230 ENGIDTKLAAHEKDEKQNDEKQNEKQNDEPFLVNDN-SGKR 269 >UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PG59_CHIPD Length = 816 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 224/813 (27%), Positives = 365/813 (44%), Gaps = 92/813 (11%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE-ALEACSVDLVALRQELEAFI 62 E++ ++ +A A A+EH H T HLLLA L L+A ++D L + E + Sbjct: 11 PEVQSAIRIAQALAKEHHHANYTPAHLLLACLHKEVGITPQLQAMNIDTYYLEEWAEVRL 70 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 + A VLQ A + VLVAI + + Sbjct: 71 DSVPK---AGRLPEQPDADEYAANVLQEADAVRLEYDLDAADAWCVLVAISTPGVGFSFE 127 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 L+ + R +++ + D G+ + + L R+ Sbjct: 128 QLKTFPLQRAQLLSHFNK----------KDSNGAAPKTTIVTGKSVAQKYIYKLTDPQRL 177 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 L GR+ E+ +++L R+ +++ L+ GE GVGKTA+A+ LA I+Q P + Sbjct: 178 QAKHALAGRDAEVRTMMEILTRKGRSSILITGEGGVGKTALADALASAILQKQAPLQLQQ 237 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 IY+LD G+ +AG Y+ + E R + ++ QL++ +LFID +HT++ S G Sbjct: 238 TDIYALDYGAFIAGAAYKNELEDRLQQIMSQLQEAGRHVLFIDNLHTLLDKQPGSAGG-- 295 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII---- 358 N++K ++ G I +I ++T + F + E D L F+ + + EP ++I Sbjct: 296 IGNVLKAAMNKGDITLIATSTPEGFRKLIEPDGLLRHCFEVVQLAEPDEATAARMIQAVM 355 Query: 359 ------------------------NGLKPKYEAHHDVRYTAKAV---------------- 378 LK + V + + Sbjct: 356 PDYESYYNLKVAPEVISEAIKLSRRYLKERSLPDSAVNLLDRTLAAIRTTQDTGKITLDD 415 Query: 379 -------------------RAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV----- 414 + ++ + R P + I ID A + Sbjct: 416 LKAKLEAAGDSREELRWWYQQCMQRYSALVTTRLQPQQDIYKIDNEAALKTALLDIIAQL 475 Query: 415 ----SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 + V D+ +++A IP + +R+ L N+ L+ V GQD A++ + Sbjct: 476 EPLVETQHVAVTGIDLATMIAESTGIPLGKIQSGERERLVNMDLELRKRVVGQDHALKTV 535 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMER 527 +EAI +R+GL +P+GSF F GPTG GKTE+ L+ L + ++RFDMSE+ E Sbjct: 536 SEAILESRSGLSRPGQPIGSFFFLGPTGTGKTELAKSLADFLFQDERCMIRFDMSEFKEE 595 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 H+ + L GAPPGYVG+++GGLL + + + P+AV+L DEIEKAHP VF+I LQ+MD G L Sbjct: 596 HSAALLYGAPPGYVGYEEGGLLVNKIRQQPYAVVLFDEIEKAHPSVFDIFLQIMDEGKLH 655 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 D G+ DF N +++ T+N G + S S ME + + F PEF RL I Sbjct: 656 DRLGKTGDFSNALILFTSNIGSDVIAQ-SFRQGVIPASQQLMEIMARNFRPEFLGRLTEI 714 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 + F + + + ++ D + L L Q+ ++L+VS AR LA +GY GARP+ V Sbjct: 715 VPFGPIQQENVVKIFDIHLKHLLQLLTQQQITLDVSVAAREKLAAEGYSPLYGARPLKEV 774 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 I+ L+KPL+ ++ GSL V + +D + Sbjct: 775 IRSRLRKPLSRMIIEGSLQPHTTVKLDIDAQGE 807 >UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0EI70_ENTDI Length = 840 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 217/850 (25%), Positives = 381/850 (44%), Gaps = 127/850 (14%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEA 60 + A E ++ ++ H++ A++ S +E D+ L++E++ Sbjct: 7 TDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKLKKEIKE 66 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + P D + Q+VL+RA+ + G + + +++++ E+E Sbjct: 67 TMNKVPVQNP---PPVDIGLHPTTQQVLRRAIEKQKIMGDSYLAIDVIVMSLMEEKE--I 121 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 + ++ ++ + I+ + G ++E E ++ + +L A Sbjct: 122 STIVGNSGINVKEFNKKITEMRK----------GQSVETKEAESQYEALKKYGNDLTAQA 171 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 G +DP+IGR++E++R I++L RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVP + Sbjct: 172 ESGKMDPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNL 231 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGAASGG 299 C + LD+G+L+AG +YRG FE+R KA++K++++ ILFIDEIHT++GAGA G Sbjct: 232 Q-CRVIGLDMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEG 290 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP+LS G++R IG+TT +E+ EKD A RRFQ++ + EPS E+T+ I+ Sbjct: 291 AMDAANILKPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEEDTLYILR 350 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G++ KYE H+ + T A+ +A L+ +YIN R LPDKAID+ + R + ++ Sbjct: 351 GIREKYENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLRNTIKCRENSIRKRHKEX 410 Query: 420 TVNVADI--------------------------------ESVVARIARIPEKSVSQSDRD 447 E + +I Sbjct: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEKGGSEEMKELATKIEAMKHKAESTK 470 Query: 448 TLKNLGDRLKMLVFGQDKAIEALTEA-------------------------IKMARAGLG 482 L+ D + +K ++ L E I + + Sbjct: 471 DLEVAADLKYYAIPEAEKRMKELKEQNKETTMISLQVTPTQIEEVVSRWTGIPVTKMNQT 530 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVG 542 + + + +G+ E +S A+ R + +G P G Sbjct: 531 EKTRLMKLEEELHKRVIGQNEAVTAVSDAIIRS--RGGLGNEKRPTGSFMFLG-PSGVGK 587 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIE----------------------------------- 567 + L + ++ +D E Sbjct: 588 TELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPY 647 Query: 568 ---------KAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER--KS 616 KAHP VFN+LLQ++D G LTD GR DF+N +++MT+N G + + Sbjct: 648 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIMKGVER 707 Query: 617 IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK 676 G + + ME +KK F PEF NRLD+I F LS + ++V + E+ + ++ Sbjct: 708 EGQVSRKVKETVMEIVKKTFKPEFLNRLDDITVFSPLSEKELKEIVKLQMGEVIKMIKKR 767 Query: 677 G--VSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 +E+++ A + + GY A GARPM R I+ + + ++ G + + ++ + Sbjct: 768 YPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIEKTVVTSITKSIISGMMKEKNKIQID 827 Query: 735 LDKEKNELTY 744 + +K ++ Sbjct: 828 YENDKIQVKI 837 >UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CLPB_DEIRA Length = 852 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 241/864 (27%), Positives = 389/864 (45%), Gaps = 144/864 (16%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + +++N A A+E+ ++ +T H+L LL N +A AL DL R L+A Sbjct: 6 FTEASAVAINAAQQLAQENHNQNLTHFHVLRTLLDNDTASRALTLAGGDLNTARAALDAE 65 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 I + V + + R Q+A G + V +L+A+ E + Sbjct: 66 IAKLPKV---QGSDGQLYLDPALNRAFQKADTLAAQLGDSFVAADTLLLALRGEYRGRG- 121 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 + + G ++ + + + T+L Q AR Sbjct: 122 ----------------LPDEVSLNRAVTEQRKGKTVTNKTSEQQFDALNKYGTDLTQRAR 165 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G DP+IGR++E+ R +Q+L RR KNNP+L+GE GVGKTAIAEGLA RIV+GDVPE + Sbjct: 166 DGKFDPVIGRDEEIRRVMQILLRRSKNNPVLIGEPGVGKTAIAEGLAMRIVKGDVPEGLR 225 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTIIGAGAASGGQ 300 D I SL++GSLLAG K+RG+FE+R K ++ + ++ ILF+DEIHTI+GAG G Sbjct: 226 DKKIVSLEMGSLLAGAKFRGEFEERLKGVIDEVVKSAGEIILFVDEIHTIVGAGKTE-GS 284 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 DA N++KP L+ G++ +IG+TT E+ EKD AL RRFQ + + EPS+E+T+ I+ G Sbjct: 285 PDAGNMLKPALARGELHLIGATTLDEYRE-IEKDAALERRFQPVFVDEPSVEDTISILRG 343 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 +K +Y+ HH+V T A+ AA L+ +YI DR LPDKAID+IDE+ AR R+ S ++ Sbjct: 344 IKERYQVHHNVEITDPALVAAATLSNRYITDRQLPDKAIDLIDESAARLRMALESSPERI 403 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK------MLVFGQDKAIEALTEAI 474 ++ + + ++ ++ L ++ ++LK V + +A A+ Sbjct: 404 DQLSRRKLQLEIEREALKREKDVDSQNRLLDIENQLKTLTDELNEVRSRWEAERGEVAAL 463 Query: 475 KMARAGL----------------------------------GHEHKPVGSFLFAGPTG-- 498 + R L K + S FA Sbjct: 464 REKREKLDAVRTQIEKARRDYDLEEAARLEYGELPALEKDVQDLEKKLKSAEFAHMEVTE 523 Query: 499 -------------------VGKTEVTVQLSKALGIELLRFDMSEYMERHTV--------- 530 G+ E + L + L ++ D + + Sbjct: 524 EDIAAVVSRWTGIPVSKLMEGEREKLLHLEEQLHGRVIGQDRAIVSVSDAIRRARAGLND 583 Query: 531 -SRLIGA-----PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV---- 580 +R +G+ P G + L + + A++ +D E L+ Sbjct: 584 PNRPLGSFMFLGPSGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHTVARLIGAPPGY 643 Query: 581 ---MDNGTLTDN------------------------------NGRKAD-------FRNVV 600 + G LT+ +GR D FRN + Sbjct: 644 VGFEEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTL 703 Query: 601 LVMTTNAGVRETER-KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 ++MT+N G + G + + M+E++ F PEF NR+D+II FD L+ + Sbjct: 704 IIMTSNIGSPLILEMQQRGEDAETIKSAVMDELRGEFRPEFLNRVDDIIVFDALTAKDLQ 763 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719 +VD + L+ +L ++ ++L ++++A++ LAE GYD A GARP+ R I ++ PLA E Sbjct: 764 SIVDIQLGGLRRRLAERRITLHLTEDAKDKLAELGYDPAYGARPLRRTISQYIETPLARE 823 Query: 720 LLFGSLVDGGQVTVALDKEKNELT 743 +L G + DG + V Sbjct: 824 ILGGQIQDGSVLNVDYGDGGFTFN 847 >UniRef50_C3RJA5 ATPase n=3 Tax=Bacteria RepID=C3RJA5_9MOLU Length = 665 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 215/716 (30%), Positives = 374/716 (52%), Gaps = 62/716 (8%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 +++ + ++ + + A + H + EHLLL+LL + RE ++ VD + ++++ Sbjct: 5 FDEQAQKAIVVGESIAFDLGHNNVGSEHLLLSLLKISDSKLRELVKKYDVDDKNIYEDIK 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ + + + + +L+ A+ +++VT + +A+ +ES Sbjct: 65 RLFGTN------DDQPFYMEYSDAVKSILEAAMEITNQQNKSKVTLNILTIALLQSEESV 118 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A LL+K++V +++ ++ + + NLN+ Sbjct: 119 AHELLKKYKVDFEEIIYQLNESSELETKLDQIQS-------------------LVNLNKK 159 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 + G ++GR+KELE+ +L ++ KNN L++GE+GVGK+A+ E LA+ I Q V E Sbjct: 160 VKQGE-HLIVGRQKELEKLCMILSKKEKNNALIIGEAGVGKSALVEKLAYLINQKQVNEG 218 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + IY L + S++AGTKYRG+FE++ + ++ ++++ N I+FIDEIH IIGAG A G Sbjct: 219 LKKKIIYELSLSSIVAGTKYRGEFEEKLRKIIDKVKEMDNVIIFIDEIHNIIGAGGAEGA 278 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ + +IG+TT +E+ FEKD+A+ RRF I + E + EET++I+ Sbjct: 279 -IDAANILKPYLARKDLTIIGATTTEEYFQHFEKDQAMNRRFSVITLKENTKEETLEILQ 337 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 K YE H + + + V+ +YI +R PDKAID+ D A +AR K Sbjct: 338 KTKLFYEQFHQIEVDNEVLTYLVDNVDRYIKNRTFPDKAIDIFDLACVKARFKQQHIITK 397 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 + IE + V S+ + +L + GQ KAIE + +K+ + Sbjct: 398 QIVKDVIEEYTS---------VKISEDYDYDEIKAKLNHHIIGQSKAIEQIINQLKLTK- 447 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPG 539 +P LF G +GVGK+E QLSK LG +L+R DMSEY + +V ++IGA PG Sbjct: 448 ---QSKQPSAVMLFVGNSGVGKSESAKQLSKLLGRKLIRLDMSEYRDSSSVQKIIGAAPG 504 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+D+ LL + +P +++LLDEI+KA DV N+ LQV D G L D++ RK F N Sbjct: 505 YVGYDKPSLLLGQLQTYPKSIILLDEIDKASQDVINLFLQVFDEGYLEDSHKRKVYFNNT 564 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 +++MT+N G + ++G ++S+ K F+ E +R+D II F +L+ + Sbjct: 565 IIIMTSNKGT---AKNTLGFKKNNHSSKV----KNFFSDELLSRIDEIINFKNLTKMDLK 617 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 +++ K ++ ++ + L + + YD + R + + + Sbjct: 618 KIIRKNCP---HEVKEEDIELILKE----------YDMKLQGRGIVKAANKYFQNK 660 >UniRef50_C2EIG8 ATP-dependent Clp protease n=4 Tax=Lactobacillales RepID=C2EIG8_9LACO Length = 636 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 220/614 (35%), Positives = 358/614 (58%), Gaps = 26/614 (4%) Query: 140 HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGID-PLIGREKELERA 198 + + ++ + E + ++ +TTNL+ A+ D + GREKE+E Sbjct: 7 DNFDEIDDLENIVVEDDTENNETSFPTPYLDQYTTNLSIKAQSRPDDYEVYGREKEIEDI 66 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 I L R+ KN+PLL+GE+GVGKTAI EG+A RI++ VPE + D T+ SL++ SL++ T Sbjct: 67 IISLMRKTKNSPLLIGEAGVGKTAIVEGVALRIIRNQVPESLQDLTVRSLELSSLMSDT- 125 Query: 259 YRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 G F +FKA++++ + ++LFIDEIHT++GAGA +DA N++KP L+ G+I+ Sbjct: 126 VEGSFLAKFKAIIEELVATKGENLLFIDEIHTLMGAGANGQA-LDAGNVLKPALARGEIQ 184 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 +IG+TT E+ E DRAL RRFQ I I EP+ E+ + I+ G+ P +E H V+ A Sbjct: 185 MIGATTIDEYHETIENDRALQRRFQNIQIDEPTKEQALVILQGVTPSFENFHQVKIKESA 244 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 ++AA+ L+V+YI DR LPDKA+D++DEA A S+ V+ +I V+ R IP Sbjct: 245 LKAAINLSVRYIPDRFLPDKALDLLDEASTIAS----SQNSTNVSEVEIAEVLKRRTGIP 300 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 ++ +++ D LKN+ RL V GQ+ A++ +++A+ ++RAGL E KP+G+FLF G T Sbjct: 301 VTTILRAEEDRLKNIESRLSKRVKGQEFAVKEVSDAVTISRAGLQDETKPLGTFLFLGTT 360 Query: 498 GVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 GVGKTE+ L++ + + ++R DMSE+ + + +LIG G+LT+AV Sbjct: 361 GVGKTELAKSLAEVVFDDENAMIRLDMSEFSQPGSSLKLIGTRKT------KGVLTEAVK 414 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 P++++L DE+EKA +V ++LLQ++D+G LTD GR F+N +++MTTN G + + Sbjct: 415 HRPYSIVLFDELEKADREVHDLLLQILDDGRLTDGTGRLISFKNTIVIMTTNIGADKIKL 474 Query: 615 KSIGLIHQDN---------STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKF 665 +N E++ F PEF NR+D+ + F L +VI ++ K Sbjct: 475 NEELKGDIENLSLREYNQFIESMDIELQTEFRPEFINRIDHKVVFKMLGEEVIREIAIKD 534 Query: 666 IVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSL 725 + L ++ ++ L ++E ++LA G D GARP+ R+I + P++ +LL Sbjct: 535 LEILDQRMQKQKAKLVYNEELLDYLAFNGTDVNNGARPLMRLINRKVLAPISRKLLTLPK 594 Query: 726 VDGGQVTVALDKEK 739 + + + Sbjct: 595 RKNVEYIFKVVVKG 608 >UniRef50_C0SQM4 Putative ATP-dependent Clp protease n=1 Tax=Lactobacillus brevis RepID=C0SQM4_LACBR Length = 597 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 201/578 (34%), Positives = 321/578 (55%), Gaps = 26/578 (4%) Query: 169 MENFTTNLNQLARVG-GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGL 227 +E + T+L +L + IGREKE+E + L R+RK+NPLL+GE GVGKTAI EGL Sbjct: 5 IEKYATDLTRLVQNDLEGYQAIGREKEIEELLVTLARKRKHNPLLIGEPGVGKTAIVEGL 64 Query: 228 AWRIVQGDVPEVMADCTIYSLDIGSLLAGTK-YRGDFEKRFKALLKQLEQDTNSILFIDE 286 A +IV +VPE + I+ +++ L+ G + + G F A+ N ++FIDE Sbjct: 65 AKKIVLQEVPERLQSAHIWVIELAGLMNGERPFLGLFRDLIMAISHDC---PNDLIFIDE 121 Query: 287 IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 +HTI+GAGA+ +DA N++KP L+ G I++IG+TT +EF + E D AL RRF+ + + Sbjct: 122 LHTIVGAGASGKQGLDAGNVLKPALARGDIQLIGATTIEEFHDYIEADGALTRRFEVLQV 181 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EP E T +I+ GL+ Y+ +H V+ T A+ V LA +YI DR +PDKA+D++DE+ Sbjct: 182 AEPDTETTKKILYGLRLSYQTYHYVKITDDALNQIVTLANRYIPDRFMPDKALDILDESC 241 Query: 407 ARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKA 466 A R ++ V + V+ R IP S+ + ++ + + ++ V GQD A Sbjct: 242 ADTRQRQLT----EVTRERVAQVLERRTGIPMTSILRDRTQRIERITEIIQRRVKGQDAA 297 Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSE 523 + +++++ ++ AGL E +P+ SFLF G G GKTE+ LS+AL + ++R DMSE Sbjct: 298 VREVSDSVAVSFAGLEDERRPISSFLFLGTPGTGKTEMAKALSEALFDDEEAMIRLDMSE 357 Query: 524 YMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDN 583 + E ++ RLIG D+ G+LT+ V P+AV+LLDEIEK V ++ LQ++ + Sbjct: 358 FAEENSAQRLIGT------ADKRGILTEQVKHQPYAVVLLDEIEKGDRSVQDLFLQILSD 411 Query: 584 GTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD-------AMEEIKKIF 636 G + D+ GR F+N +++MTTN ++ D + F Sbjct: 412 GIVHDHYGRPISFKNTIIIMTTNLAGAVINDEAEYNSASDTDQKALAFEGNVENALHNYF 471 Query: 637 TPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYD 696 PEF NR+++ + F L+ V+ ++ K++ EL +L +G +LA+ G++ Sbjct: 472 RPEFVNRIEHKVVFQMLTESVVEKIARKYLQELTNKLAVRGYRFTYDDLVPKFLADVGFN 531 Query: 697 RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 GARP+A + + PLA LL G + Sbjct: 532 LKNGARPLAYMTHRKVTAPLARILLRLE-QTGNTKQIT 568 >UniRef50_A6EIG8 Putative ATP-dependent protease n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIG8_9SPHI Length = 828 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 197/831 (23%), Positives = 365/831 (43%), Gaps = 93/831 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE-ALEACSVDLVALRQELEA 60 +++ + L++ +A + A+E+ + + HLL L+ L + D + + E Sbjct: 6 ISESVRLAIRVAQSLAKEYHNAEFSAAHLLKGLMHKEVGLIGFLNSIDKDEAYISEWAEV 65 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 I++ V A + D + + + A G + +T VL A+ Sbjct: 66 RIDELDKVAVAPD---DVKGGREIAGIFEEADLVRIKLGLDLITPVCVLTALCKPTVGFP 122 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 L+ + ++++ T + + + G + + + + A Sbjct: 123 PDQLKSFPIKEKEILDLYLDDTELKQAVKPGTTVDA-KTGSSEGAKAALHKYCIDRIAQA 181 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G DP+IGR+KE +++L RR K N ++ G++GVGKTA+ +GLA I+ G+VP ++ Sbjct: 182 RDGKTDPIIGRDKETRMVLEILGRRTKPNVIITGDAGVGKTALVDGLAQDILSGNVPAIL 241 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 + ++ LD+GSL+AG Y+G+ E R K +LK+++Q +ILFIDEIHT++ GG Sbjct: 242 KNVQLFELDLGSLIAGASYKGEIEDRLKNILKEIKQYDKAILFIDEIHTLLDNKGPIGGG 301 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 NL+KP L+ G+I VIG+TT E+ I E ++A +RRF+ + + EP+ ++++ Sbjct: 302 --VGNLLKPELARGEITVIGATTMDEYRKIIEPEQAFSRRFEVLQVQEPNEASAIKMLEK 359 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 L KYE HH ++ A+ V LA +Y+ DR LPD A D++D A ++M + + Sbjct: 360 LAEKYEQHHQLKIQKDAIPECVRLAKRYMKDRRLPDAAFDLLDRTMAAMKMMNDTSDQVL 419 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ--DKAIEALTEAIKMAR 478 + ++ R + + D++ ++ GQ D+ E ++ + Sbjct: 420 AELD--ADLLQLNEAEVADDQLADYRWLYQQMQDKVSPILVGQLTDETQVDAFETVEEFK 477 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRF---------DMSEYMERHT 529 + + V K ++ +S GI L + +M Y+++ Sbjct: 478 DYISRNLDALKVLAETKHDEVAKQDIASIVSYKTGIPLGKIQAQEKEKLLNMEGYLKKRV 537 Query: 530 V-----------------------SRLIGA-----PPGYVGFDQGGLLTDAVIKHPHAVL 561 V + IG+ P G + + + + A++ Sbjct: 538 VGQDRALKSVADAILESRSGLNKKGQPIGSFFLLGPTGTGKTELAKSIAEFLFNDEKAMI 597 Query: 562 LLD--------------------------------------------EIEKAHPDVFNIL 577 D EIEKAHP VF+ Sbjct: 598 RFDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQQPYSVLLFDEIEKAHPSVFDTF 657 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFT 637 LQ++D G + D G++ DF N +++ T+N G + + S ME + + F Sbjct: 658 LQILDEGHMHDRLGKEGDFSNALILFTSNIGSEWIAEQ-LSKSLVPTSQQLMEIMARHFR 716 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDR 697 PEF RL I+ F +S D + ++ + + L LD++G++ E+ + A LA G+ Sbjct: 717 PEFLARLSEIVPFAPISEDNVVRIFEIQLRSLVEALDKQGITFEIDEAATKMLALSGFTP 776 Query: 698 AMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 GAR ++ VI++ L++P++ ++ G+L G + V ++L + Sbjct: 777 KYGARQLSGVIRNELRRPISKYIISGALKKGNFIQVKKHPTDDQLEWTINE 827 >UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two ATP-bindingdomains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FU98_SORC5 Length = 945 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 212/606 (34%), Positives = 325/606 (53%), Gaps = 47/606 (7%) Query: 162 QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 + + NL+ A G ++P++GRE E+E+A+ VL +R NNP L+G +GVGKT Sbjct: 320 DRARFPALASLGHNLSLAAVQGELEPIVGREHEIEQALDVLAKRHANNPCLLGPAGVGKT 379 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NS 280 ++A G+A R+ + + L LLAGT RG +R AL ++ + Sbjct: 380 SVARGVAHRLAFDEREP----RVVVELVPSELLAGTGARGALSERLSALRSEVREAGGRV 435 Query: 281 ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR 340 ILFID + + G+GA + K L+ G++ +IG+ T +E+ E D ALARR Sbjct: 436 ILFIDGLSELFGSGALDEAMAEI----KLALARGELTMIGTATPEEYRKSIEVDPALARR 491 Query: 341 FQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 F ++I EP +E ++ + AHH + +T +A+ +AV +V+Y+ R LPDKA+ Sbjct: 492 FTIVEIDEPEEDEAFLLLQSVAVGLGAHHGLAFTDEALASAVAWSVRYLPGRALPDKALS 551 Query: 401 VIDEAG----------------------ARARLMPVSKRKKTVNVADIESVVARIARIPE 438 ++D AG A A L ++ + V A++ VV+ +A +P Sbjct: 552 ILDLAGARTRRRASSASRASRASRTSHAAHAALHEPAQPARQVGPAEVAEVVSELADLPV 611 Query: 439 KSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTG 498 + + ++DR+ + +L L V G +A+ + ++ AGL +P+GSFL GPTG Sbjct: 612 ERLLETDRERMLSLETLLAENVVGHGEALSRIARVLRRNAAGL-RARRPIGSFLLLGPTG 670 Query: 499 VGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIK 555 VGKTE +++AL + R D SEY E H V+RL+GAPPGYVG + GG LT+AV + Sbjct: 671 VGKTETAKAIAEALFHSPDAMTRLDFSEYAESHAVARLVGAPPGYVGHEAGGQLTEAVRR 730 Query: 556 HPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET--- 612 P+ V+LLDEIEKAH DV LQV D G LTD GR+ DF N VLVMT+N G E Sbjct: 731 RPYQVVLLDEIEKAHRDVLEAFLQVFDEGRLTDGRGRRVDFTNTVLVMTSNLGAAEAGAL 790 Query: 613 -ERKSIGLIHQDNS-------TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 +S+G ++ + + PE NR+D ++ F L+ + ++ + Sbjct: 791 RSERSVGFARSSSAVSPERLGETMLSAARAALPPELYNRIDEVLCFAPLTRADVAEITRR 850 Query: 665 FIVELQVQLDQKGVSLEVSQEARNWLAEK-GYDRAMGARPMARVIQDNLKKPLANELLFG 723 + L+ +L+ +GV LEV EA + L + G+D +GARPM R I ++ PLA +L G Sbjct: 851 LLGGLERELEARGVELEVEPEAIDALLDAGGFDPELGARPMKRTIARLVEAPLAELILRG 910 Query: 724 SLVDGG 729 L +G Sbjct: 911 QLEEGS 916 >UniRef50_A3CKB2 ATPase with chaperone activity, ATP-binding subunit, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CKB2_STRSV Length = 638 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 217/598 (36%), Positives = 352/598 (58%), Gaps = 26/598 (4%) Query: 140 HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDP-LIGREKELERA 198 +++ + + EE+ ++ +T N+ + R + + GR+KE+E+ Sbjct: 11 EEYQEEIMPDTLKFQDPVSIEEEESLTPYLDKYTENVTEKIRKKIDNFTVFGRDKEVEQV 70 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 I L R+ KN+P+LVGE+G GKTAI +GL I++G+VP+ T+ SL++ ++ + + Sbjct: 71 IVSLLRQTKNSPILVGEAGTGKTAIVDGLVVEILKGNVPDEFKHVTVRSLELSNISSKSD 130 Query: 259 YRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 D R K ++++L+ +ILFIDE+HTI+GAG G +DA N+IKP L+ G+I+ Sbjct: 131 GE-DMVSRLKRIIEELKVTKGENILFIDEVHTIVGAGG-DGSMLDAGNVIKPPLARGEIQ 188 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 +I +TTY+E+ + E D+AL RR Q + + EP+ ++ + I+ ++ ++E ++ T A Sbjct: 189 MISATTYEEYQSSIETDKALERRVQMVPVEEPTEDQAIFILGNIRRRFEKERNITITDDA 248 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 V AV LAV+YI +R LPDKAID++D+A A +++K V++ DI V+ ++ +IP Sbjct: 249 VEQAVRLAVRYIPERFLPDKAIDLLDDATA----QAYFEKRKVVDIEDIARVIQKMKKIP 304 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 ++ + D + L N D LK V GQD A+ + I +++ G +KP+GSFLF G T Sbjct: 305 VTTILKDDSERLMNFTDELKKYVKGQDFAVSQVANTIYISKEGFQRPNKPLGSFLFLGTT 364 Query: 498 GVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 GVGKTE+ L+K L ++R D SEY + +LIG VG GLLT+ V Sbjct: 365 GVGKTELAKALAKILFDNVDAMIRIDCSEYSSKGDKDKLIGKNI--VGSK--GLLTEPVK 420 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 +P++V+LLDE+EKAHPD+++ILLQV+D G LT GRK +F+N +++ TTN+G E ++ Sbjct: 421 NNPYSVVLLDELEKAHPDIYDILLQVLDEGHLTTGTGRKINFKNTIVIATTNSGADEIKK 480 Query: 615 KSIGLIHQDNSTD---------AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKF 665 + TD +EE+ F PEF NR N + F+ L+ D+I +VD Sbjct: 481 TYANEGNFGEMTDLAYEGFMNRIVEELSLTFRPEFINRFGNKVVFNMLTADIIEAIVDLA 540 Query: 666 IVELQVQLDQKGVSLEVSQEA--RNWLAEKGYDRAMGARPMARVIQDNLKKPLANELL 721 + + +L ++ V L+ +A ++L KG GARP+ R+IQD + P+A +L Sbjct: 541 WKKEEKRLAEQKVYLQYEDKAEFYDFLRSKGTSVENGARPLERLIQDRVTGPIAEKLF 598 >UniRef50_B5RQH1 ATP-dependent Clp protease, subunit C n=24 Tax=Borrelia RepID=B5RQH1_BORRA Length = 744 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 215/740 (29%), Positives = 391/740 (52%), Gaps = 21/740 (2%) Query: 12 MAFARAREHRHEFMTVEHLLLA-LLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLP 70 + AR++++ ++ HLL++ LL +P E + L ++Q+ IE+ VL Sbjct: 7 SSREVARKNKNREVSSWHLLMSILLIHPKKSEIKNIETKTLKNIKQDTLYEIEKLEKVLI 66 Query: 71 ASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVS 130 + E + + ++ + +S + + + I ++ Y L K + Sbjct: 67 GTNEIVIPKISREIFTLIDQTKKEFKS--KTLIGIKEIFYQILKTKKLLKKYKLNKLSFN 124 Query: 131 RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIG 190 + + + + + + E + + + NL LA+ +DPLIG Sbjct: 125 FDE-----DNIITSIDKIRLIETYKEFEDETRQNDYFEINKYVKNLTTLAKEKKLDPLIG 179 Query: 191 REKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI 250 REKE++ I +L RR KN+ +L+GE G+GKTAI EGLA +I ++ + + I ++ Sbjct: 180 REKEIQSLISILERRNKNSTILIGEPGIGKTAIVEGLAIKIANKEIKSQLQNKIILQIET 239 Query: 251 GSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPL 310 L++GTKYRG+FE+R ++K ++ + N I+FIDEIHT+IGAG + G +DAAN++KP+ Sbjct: 240 SDLVSGTKYRGEFEERLNNIIKSIKNNKNIIIFIDEIHTLIGAGNSE-GSIDAANILKPI 298 Query: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD 370 LS I++IG+TTY E+ KD+A RRFQ I I EP +ET+ IIN + +E +H Sbjct: 299 LSRSAIQIIGATTYDEYRKHISKDKAFTRRFQTISIKEPDEKETLNIINSIIKNFENYHG 358 Query: 371 VRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVV 430 V Y +A+ + L+ +Y+ +R PDKAID+ID AGA+ + ++ + VN D+++ Sbjct: 359 VTYEKEAIENVISLSSQYLTNRKFPDKAIDLIDIAGAQKKQQEINTK--IVNAEDVKNTT 416 Query: 431 ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGS 490 I K + LK +K + GQ+ AI+ + + + G+ + +P+ S Sbjct: 417 DEFFGIKVKLSLTEEIAYLKEETINIKEKIIGQESAIDEIIIEMVKTKLGINNNIQPLTS 476 Query: 491 FLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 L G +G GKT ++ +SK + + +L+ DMS+Y E ++S+LIG PGY G+ GG Sbjct: 477 ILLIGSSGSGKTILSKTISKIMIKDQNSILQLDMSDYREETSISKLIGTNPGYAGYTDGG 536 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 607 +L + + +P A ++ + IE AH V +I+ Q+++NG L DN K F+N ++V++T+ Sbjct: 537 ILINRLKYNPRAFIIFENIEYAHNSVMSIIEQILENGELIDNTEDKISFKNSIIVLSTSI 596 Query: 608 GVR-ETERKSIGLIHQDNSTD----AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 662 G + + +G DN+ D E+K F +++ I + L+ + + Sbjct: 597 GSKILLGKGILGFNKTDNNIDIKSTINNELKTKFKLSLIDKIQKKIILNVLTEKDLSIIY 656 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 D + EL + K + +E+ +N + +K YD+ GAR + +++N+++ + N++ Sbjct: 657 DNYCKELTQKFSLKNIQIEIDDSLKNHIIKKYYDKNSGARSILNAVKENIEEKIINQIFH 716 Query: 723 GSLVDGGQVTVALDKEKNEL 742 + + + L++ ++ Sbjct: 717 NPNI--NLIKIYLEQNNIKI 734 >UniRef50_Q0SNE4 ATP-dependent Clp protease, subunit A n=22 Tax=Borrelia RepID=Q0SNE4_BORAP Length = 765 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 212/749 (28%), Positives = 367/749 (48%), Gaps = 39/749 (5%) Query: 18 REHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERD 77 E +H T EH+ L+ + +E L+ C++D L + LE F + P+ + Sbjct: 19 MESKHLVFTEEHIFYGLIKSDKVKELLDLCTIDFYKLNKHLEEFFGK-LPLRNNYIPDYV 77 Query: 78 TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSR------ 131 + + ++ F+ + + ++L + ++++ L + Sbjct: 78 SSIDYLYDDIISTLFFYKKPYK---IQEKDLLWVLVKKRKNSILDALLNSGFNLTIFDKL 134 Query: 132 LDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAG----------------------GEERM 169 ++V ++++ T+ D S G ++ ++ + Sbjct: 135 IEVHDYLAVNTKSDSGYGSELIGEYIHNNSPKSKGGFHIFDDNRDKPDQNNIFLENKDSI 194 Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAW 229 NF TN+ A +PLIGR++EL R IQV+ R+ K+NP+L GE GVGKT + +GLA+ Sbjct: 195 GNFLTNVID-ALDLKQNPLIGRKQELSRLIQVILRKHKSNPILFGEPGVGKTVLIQGLAY 253 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHT 289 +I +VP+ + IYSLDIG L++GTKYRGD E R +L L +LFIDEIH Sbjct: 254 KIKTENVPKDLIGYEIYSLDIGRLISGTKYRGDLESRMNRVLDFLNSRKKVMLFIDEIHM 313 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 I+GAGA S G +D +NL+KP+L+ GKI+ IG+TT E+ F KD+AL RRFQ I++ EP Sbjct: 314 IVGAGATSFGSMDISNLLKPILTLGKIKFIGATTEYEYRKFFAKDKALMRRFQSIELKEP 373 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 + E+T I+ +K YE HH+V YT +A++A + ++ KYI DR LPDKA D++DE G++ Sbjct: 374 NFEDTYNILQEIKKDYERHHNVEYTDEAIQACIAMSQKYIKDRFLPDKAFDILDELGSKF 433 Query: 410 RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEA 469 +L + + + D+ ++ I + + + + L NL +R+K D + Sbjct: 434 KLENIKR---IITKDDVCDLIKSIVGSNIFNFEEYNSELLINLENRIKKEFIIHDSLVFD 490 Query: 470 LTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHT 529 L IK+ + L +G F F G +G K ++T LS+ I +M EY + + Sbjct: 491 LILNIKLLKFNLLANRSTIGIFAFIGASGAEKCKLTDILSEEFKIPKFNLNMGEYSDFTS 550 Query: 530 VSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDN 589 + RLIG G+ + + K ++++ L + +K + V + L+ G L D Sbjct: 551 LDRLIGPVLSNDGYYESTRFFKFLNKSSNSIIFLSDFDKCNKRVLDFFLEGFRTGKLFDG 610 Query: 590 NGRKADFRNVVLVMTTNAGVRETERKSIGLIH-QDNSTDAMEEIKKIFTPEFRNRLDNII 648 G+K ++V++ NA E SIG + D ++K F EF +D + Sbjct: 611 LGKKVSLSESLIVISVNAESNEL--NSIGFKNKMAGENDFDLILEKRFPNEFLELIDYVF 668 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F + +++ + L + + + +++ EK + G + + + I Sbjct: 669 VFKSIDELDFEKIIFNELNRFARMLRDRKFDVFFEKSVVDYIREKISGKGYGLKSVKKFI 728 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDK 737 + K L +E+LF + + G++ + LDK Sbjct: 729 FKEVGKLLIDEILFKKIENSGKIKIYLDK 757 >UniRef50_Q1WR72 ATP-dependent Clp protease n=2 Tax=Lactobacillus salivarius RepID=Q1WR72_LACS1 Length = 606 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 214/590 (36%), Positives = 335/590 (56%), Gaps = 44/590 (7%) Query: 165 GEERMENFTTNLNQLARVGGID-PLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 + +T NL AR D +IGR+KE+ + I L R+ KNNP+L+GE+GVGKTAI Sbjct: 6 QTPSLSKYTINLTANARNNPDDYKVIGRDKEIVQVIFNLSRKTKNNPILLGEAGVGKTAI 65 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSIL 282 +GLA I V E + + I L I +L + D ++ ++K+ +Q +IL Sbjct: 66 VDGLARLIALNQVGEKLKNKQIRVLQIAAL-----GQQDVVRKMLNIIKECKQTKGRTIL 120 Query: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342 FIDEIHTI+GA S G +D +++KP ++ G+I++IG+TT+ E+ EKD AL RRFQ Sbjct: 121 FIDEIHTIMGA-DTSNGAMDLGDVLKPAMARGEIQLIGATTFDEYDKFIEKDPALERRFQ 179 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI 402 +I + EPS ++ V+++ G++ YE H + YT +AV A V+L+++YI DR LPDKAID++ Sbjct: 180 QILVNEPSRDDAVKVLFGIRDNYEKFHHLVYTDEAVEACVDLSLRYIGDRQLPDKAIDLL 239 Query: 403 DEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG 462 D+AG+ A +K ++ ++V DI V+ + IP ++ ++D LKNL +L +V G Sbjct: 240 DQAGSIA----ATKGQEIIDVKDIALVLQDMKGIPVTNILKNDSSRLKNLDKKLAKVVKG 295 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRF 519 Q +AI+ +T+A+ +A+AGL KP+ SFLF G TGVGKT +T+ +++ + L+R Sbjct: 296 QAEAIKTVTDAVTIAKAGLQDPTKPISSFLFLGTTGVGKTALTLAMTEVMFDSTDNLIRI 355 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DMSE+ ER ++ R LLT V + P+ ++LLDEIEKA V + LLQ Sbjct: 356 DMSEFSERESLDRF------------QDLLTMQVKRKPYCIILLDEIEKACTAVHDRLLQ 403 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN--------------- 624 V+D G L D GR F+N +++MTTN G I + Sbjct: 404 VLDAGILRDKRGRSTSFKNTIIIMTTNLGAELIVDNQIYEANTAEKFLNLTPNEIARKQD 463 Query: 625 --STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV 682 + E+ IF PEF NR+++ + F+ L+ D+I Q+ + L ++ G L Sbjct: 464 AFKKEVNMELTNIFRPEFVNRIEHKVIFNMLTRDIIKQIAYNNLATLSQRMAVHGFKLVY 523 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVT 732 + ++LA+ G D GARP+AR I++ + P+A ++ S + Sbjct: 524 EDDLIDYLADIGTDVLNGARPLARCIEEEVSAPIAMYIMKLSDDPTNNIH 573 >UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWU6_9BACL Length = 871 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 213/773 (27%), Positives = 338/773 (43%), Gaps = 99/773 (12%) Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSG-RNEVTGANVLVAIFSEQESQ 119 I + E + + + A + + +L I E+E+ Sbjct: 107 EIIKEPSSSYYLAECNTFPISEYMKSIFDFAEEMRLQNSPDGVIDSYWILNGISQERETN 166 Query: 120 AAYLLRKHEV----------------SRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQA 163 A L+ K + + + S G + E SQ + + Sbjct: 167 ANQLIYKQYLLTGNIHTEEFLLGVFKNSKFLYKDFSDGKLEREKASKIKKESQISVKLSN 226 Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 + + T++ A+ G + +IGR++E+ + VL RR KNN +L+G+ GVGK+AI Sbjct: 227 PDYSLLNDIATDITLKAKNGELMDVIGRDEEIRKVEMVLTRRDKNNVILLGDGGVGKSAI 286 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILF 283 +G+A RI + ++ + I + L A K G + +++++++ + ILF Sbjct: 287 VDGIAMRIAKNEI-VSLKGKKILQFSLNDLKA--KIGGVTSEGIIKFIEEMKREKDVILF 343 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDEIH + G + KPL++ G R+IG+TT E+ D AL RRF+K Sbjct: 344 IDEIHML-------GRVKHIMDAFKPLMARGDFRIIGATTPMEWKLYISSDTALVRRFEK 396 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + + EPSIEET+ I+ + YE H V + + AV LA KY+ LPD A VID Sbjct: 397 VIVDEPSIEETINIVKNVSSVYENFHRVNFEENTIELAVRLAKKYLKGEKLPDSAFTVID 456 Query: 404 EAGARARLMPVS----KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR---- 455 AGA AR+ R V ++ + I + D L R Sbjct: 457 NAGALARIEANQDIVMIRDYRNEVNKLKKQLKEAESIEYNEAAVDDIRKRLELKVRDFQK 516 Query: 456 --------LKMLVFGQDKAIEAL------------------------------------- 470 ++ +A+ Sbjct: 517 ERNNLTFNNYEFKITKEDIKKAVEQKAGVKIREKDLKVGKDADEEELSRLSNLKSILATK 576 Query: 471 -----------TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIEL 516 EA+ ++ G + +P+G FLF G +GVGKTE LS+ L +L Sbjct: 577 VIGQMEATNTIAEAVIRSKTGFRNPKRPIGVFLFLGTSGVGKTETAKVLSEELTGSVDDL 636 Query: 517 LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNI 576 +R DMSEY + H V++LIGAPPGYVGF GG+LT AV +P +V+LLDEIEKAHP ++++ Sbjct: 637 IRLDMSEYQQEHEVAKLIGAPPGYVGFRSGGILTRAVKNNPKSVVLLDEIEKAHPRIYDL 696 Query: 577 LLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET-ERKSIGLIHQDNS----TDAMEE 631 +LQV D+G LTD G + DF N ++++T+N G E K +G M Sbjct: 697 MLQVFDDGILTDGMGERVDFSNTIIILTSNLGSNLIREEKKVGFAKYGMEQIIQEKTMRA 756 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLA 691 I F PE NR+D I+ F + + I ++ + + + + G L+ ++EA +L Sbjct: 757 INNFFRPELLNRIDEIVTFKSFTEESIFKITSLLLEKEVEIVKESGYELKFTKEAVRFLV 816 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 + YD GAR + R I ++ PL+ ++ + G +V V D K Sbjct: 817 KTTYDSEKGARAIRRGITKLIETPLSELIINNCINKGDKVVVDSDGFKLLFEV 869 >UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=Moritella sp. PE36 RepID=A6FFT5_9GAMM Length = 865 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 207/861 (24%), Positives = 349/861 (40%), Gaps = 125/861 (14%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 LNQ + +L A + +EH LL L+ N + +D+ L EL Sbjct: 13 LNQNGKKALEGAAGLCHSRSQFTVEIEHWLLQLVENKQDDIAIICQLQGIDVQVLINELN 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQES 118 +E+ + + +L+++ + ++ +L + S+ Sbjct: 73 LSLERQ-----KTGNSAAPSLSPHIITLLRQSWLNTTIEFDEQQIRSGIILYTLLSDDSI 127 Query: 119 QAAYLLRKHEVSRL--DVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNL 176 A + RL +++ + Q+ ++ FT +L Sbjct: 128 NAMLSRHIRQFERLSANLIRDNWSIITEKSAEQNGIVAVSNAGVATNSKTPSLDQFTVDL 187 Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 + AR G +DP++GR+ E+ + + +L RRR+NNP+L GE+GVGKTA+ EGLA RIV DV Sbjct: 188 TEKARNGKMDPILGRDPEIRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLAQRIVAKDV 247 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGA 295 PE + + LD+ L AG +G+FE R KA+L +++Q ILFIDE HT+IGAG Sbjct: 248 PESLQHVQLRELDLALLQAGAGMKGEFENRLKAVLNEVKQSATPIILFIDEAHTMIGAGG 307 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 A+ GQ DAAN++KP L+ G++R I +TT+ E+ FEKD AL RRFQ + I EPS+ V Sbjct: 308 AA-GQNDAANILKPALARGELRTIAATTWAEYKKYFEKDPALTRRFQVVKIEEPSVPTAV 366 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 ++ G+ P E HHDV TA A++AAV L+ +YIN R LPDKA+ ++D A AR + + Sbjct: 367 IMLRGILPVMEQHHDVVITADALQAAVALSKRYINGRQLPDKAVALLDSACARVAISQAA 426 Query: 416 KRKKTVNVADIESVVARIARIPEKSVSQSDRD---------TLKNLGDRLK---MLVFGQ 463 ++ ++ + ++ E+ + L + D L Q Sbjct: 427 TPGLVEDLQRKKAQLEAEIKLLEREQLSGEDHGDVIIALQSDLVGVEDNLVVELQAWKTQ 486 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKT--------------------- 502 + ++A+ + I + K + K Sbjct: 487 SELVQAIQQQIADIHEHGAEQEKYIRLTALKAELHEAKNTMVYWQVDEQVICEVISDWTG 546 Query: 503 -----------EVTVQLSKALGIELL----------------RFDMSEYMERHTVSRLIG 535 E + LS + ++ R +S+ + + + L G Sbjct: 547 IPLGKMAQDELETVLNLSAEMKTRVIGQDHAIDLIARTVQISRAQLSDESKPNGIFMLTG 606 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL----------------- 578 P G + L + V ++ ++ E ++LL Sbjct: 607 -PSGVGKTETALTLAEQVYGSEENIITINMSEYKEEHKVSLLLGSPPGYVGFGEGGVLTE 665 Query: 579 ---------------------------QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE 611 Q+ D G + D GR DF+N +++MT+N G Sbjct: 666 AVRRNPYSVVLLDEIDKAAPGVQDIFYQIFDKGCVKDGEGRDIDFKNTIIIMTSNVGTDT 725 Query: 612 TERKSIGLIHQDNSTDAMEEIKK----IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 + IK F P F R NII F L+ D++ + I Sbjct: 726 ITALFADPDTAPELDSLADCIKGDLMAAFKPAFLGR-ANIIPFVPLTDDMLSTIAQLQIN 784 Query: 668 ELQVQLDQ-KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFG--S 724 L ++ + V E + + +D A GAR + +Q+ L ++ ++L Sbjct: 785 RLAARIRRNHNAEFIVDNEVITQIVSRCHDVASGARTIHNYLQNTLLPEISVQVLQAMTQ 844 Query: 725 LVDGGQVTVALDKEKNELTYG 745 + Q+ V +++ +T Sbjct: 845 QTEFSQINVTTNEDNFIITLN 865 >UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989 RepID=B7LFQ0_ECO55 Length = 849 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 210/844 (24%), Positives = 349/844 (41%), Gaps = 114/844 (13%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L E +L+ A A H + HLL LL A E + + +E Sbjct: 12 LTPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSLFNPEWVLNAIE 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHV-QSSGRNEVTGANVLVAIFSEQES 118 + + + V +S + S Q +L++ H + + L + + ++S Sbjct: 72 SELIRINTVPQSS-----PVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTMINFRDS 126 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 + +DV + S + E + +T NL+ Sbjct: 127 IFPLNVSDALCCDMDVAEELL------ISFSDEAEHSASHRPTDRSSHEYLSKYTENLSL 180 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A G +DP+ GREKE+ + I +L RRR+NNP+L GE GVGK++I EGLA +I G VP+ Sbjct: 181 RAETGKLDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPD 240 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAAS 297 V+ + I++LD+G+LLAG RG+FE R K+LL +L D +ILFIDE H++IGAG Sbjct: 241 VLKNVRIHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGL- 299 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 GQ DAANL+KP L+ G++R+I +TT+ E+ FEKD ALARRFQ + + EP+ + T ++ Sbjct: 300 PGQTDAANLLKPALARGELRIIAATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEM 359 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + L P E HH+V +A+ A V L+ +Y++ R PDK++ ++D A +R + + Sbjct: 360 LRSLLPMMEKHHNVSIREEAITATVHLSDRYLHGRRQPDKSVSLLDTACSRVAVSQSTSP 419 Query: 418 KKTVNVA--------DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEA 469 +V ++ + + + + + + L+ ++LK Q + + Sbjct: 420 DAIQDVEASLVRYQGELALLTQERSDVLRQEMLANKIAQLEEELEQLKSAWRHQSELVAK 479 Query: 470 L-----TEAIKMARAGLGHEHKPVGSFLF-------------------AGPTGVGKTEVT 505 + + M R L +K +F G G+ + Sbjct: 480 IQSSDDISSKNMYRKELESAYKKDSPMVFECVDKNCVADVVSGWTGVPLGVCLDGEQQKA 539 Query: 506 VQLSKALGIELL--RFDMSEYMERHTVSR-------------LIGAPPGYVGFDQGGLLT 550 L + L +L R+ MS + + R L+ P G + L Sbjct: 540 SGLLRCLEQRVLGQRYAMSAIASQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALA 599 Query: 551 DAV------------------------IKHPHA--------------------VLLLDEI 566 + V P V+LLDEI Sbjct: 600 EFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGGTLTERVSHNPYSVILLDEI 659 Query: 567 EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER--KSIGLIHQDN 624 EKAHPDV Q+ D+G + D G+ FR+ +++MT+N Sbjct: 660 EKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMTSNFASENITNIWNDGETNRDRI 719 Query: 625 STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ---KGVSLE 681 + + F F R N+I F L + + +V I ++ + +Q + +E Sbjct: 720 KEMLLPLFNEHFGAAFMGR-TNLIPFTPLHSKTLRDIVLIKIDKICQRFEQASGQMYKIE 778 Query: 682 VSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNE 741 + +W+ GAR + V+ + LA L + + + KN Sbjct: 779 YNDSLIDWITHHCQCDKSGARDIDSVLNSTVLPVLARYLTDSEDNRTPK-KIRISVRKNN 837 Query: 742 LTYG 745 +T Sbjct: 838 ITLR 841 >UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococcus warneri L37603 RepID=C4W7H5_STAWA Length = 882 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 208/883 (23%), Positives = 370/883 (41%), Gaps = 153/883 (17%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 L ++ + + + + + + +LLAL ++ A +L S+ L+ E++ Sbjct: 15 LTKQCKQAFEKVISLVEVKERKVIESQDVLLALTITADTGATYSLGRSSITSKKLKDEIQ 74 Query: 60 AFIEQTTPVLPASEEE----------------------------------------RDTQ 79 + +++ + D Sbjct: 75 FADIVDKRQMDSNDNDDVDEFGLKTHRKKRLLNEKIINSPVQFIDEVSSDQFIKYMNDYP 134 Query: 80 PTLSFQRVLQRAVFHVQSSGRNE-VTGANVLVAIFSEQESQAAYLLRKHEV--------- 129 + + + ++ A + + + +L+ + +++ A ++L K + Sbjct: 135 ISNNVKESIEFAEEMRFQNNPSGGIDTYWILMGMVQDEKCNAYHILMKLMLKFDFVYDGD 194 Query: 130 -------SRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 +R + N G + E + ++ +E+ + N+ AR Sbjct: 195 KLTDRFQNRGYLANSFYDGKNEKEQQLDLAKQKRITNKLYNPNYSLLEDISINITDKARN 254 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 I P+I REKE+ L RR KNN L+G+ GVGK+AI EGLA +IV ++P + + Sbjct: 255 EEILPVINREKEIHHLEIALSRRDKNNVALIGKGGVGKSAIVEGLALKIVNKEIP-SLIN 313 Query: 243 CTIYSLDIGSLLA---GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 I + L++ G +RG + + +++ + + ILF+DEIH + G Sbjct: 314 KKILQFSMNDLISVIQGDTFRG-----IQRFMSEMKSEKDVILFVDEIHML-------GK 361 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +++KP ++ R+IG+TT E+ N D AL RRF+ ++I EP++E+T++IIN Sbjct: 362 YKGITDILKPAMARNDFRIIGATTPSEWQNYISSDIALTRRFEIVNINEPTVEDTIEIIN 421 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRH-------------------------- 393 YE H V + + + AV+L KY Sbjct: 422 EAISVYENFHQVNFEEETIELAVKLGKKYFQKEQLPDLAFTILDNAGAICRIERGQFTNI 481 Query: 394 ----------------------LPDKAIDVIDEAGARARLMPVSKR--------KKTVNV 423 D+ ID I + + V Sbjct: 482 QLNYEDKMNDLKLTLKQAQSIEFNDQQIDEIRKEIKQLEKEYARNITSSKKMVFPINVTK 541 Query: 424 ADIESVVARIARIPEKSVSQS--------DRDTLKNLGDRLKMLVFGQDKAIEALTEAIK 475 I+ + + + + + L++L +K + GQD AI + A+ Sbjct: 542 EHIKKAIEQKLGESIDGLEFQGDEQFSDIELNRLRSLKAVMKSQIIGQDDAINTIANAVI 601 Query: 476 MARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSR 532 + G + PVG F+ G TGVGKTE L++ L ++RFDMSEY + H VS+ Sbjct: 602 RKKLGFKQHNHPVGVFMLLGTTGVGKTETAKILNRTLYKDESNIIRFDMSEYQKDHEVSK 661 Query: 533 LIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGR 592 LIG PPGYVG+ + G L V++HP+AV+L DE+EKAHP +F+ILLQV D+ LT++ G Sbjct: 662 LIGPPPGYVGYGRDGDLVKTVLEHPNAVILFDEVEKAHPKIFDILLQVFDDARLTNSLGE 721 Query: 593 KADFRNVVLVMTTNAGVRET---------ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNR 643 A+F ++++T+N G + ++ + + F PEF NR Sbjct: 722 VANFSECIILLTSNIGTSDIRHKKVIGLNQQNNDETDFVTVDESIKNALNNYFRPEFLNR 781 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP 703 +D I F L I ++ + + + + ++ G ++E S A +A+ Y+ GARP Sbjct: 782 IDEFITFKPLDQQEIFEITNLLLEKEKTLVESLGYNIEFSSSAMRLIAKLCYEPKNGARP 841 Query: 704 MARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 + R I L+ L++E++ G+L G + V + EL + Sbjct: 842 IKRGISKLLEDRLSDEIINGTLQKGDNIEVT--EANGELVIKY 882 >UniRef50_B5RLQ8 ATP-dependent Clp protease, subunit A n=1 Tax=Borrelia duttonii Ly RepID=B5RLQ8_BORDL Length = 769 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 204/749 (27%), Positives = 366/749 (48%), Gaps = 41/749 (5%) Query: 18 REHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERD 77 E +H F T EH+ +L+S+ RE L C++D + + LE F + P+ A + Sbjct: 26 VERKHLFFTEEHIFYSLISDDEIRELLSLCALDFYSFNKILEEFFTK-LPIRNADFYDYF 84 Query: 78 TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRL----- 132 + +Q ++ ++ + E ++L + ++++ L K S Sbjct: 85 FKINDLYQEIIDTIFYYKKPYVLQE---KDLLWVLIRKRKNTILDALLKSGFSLDIFDKI 141 Query: 133 -DVVNFISHGTRKDEPTQS----------------------SDPGSQPNSEEQAGGEERM 169 ++ +++ D ++ + Sbjct: 142 MEIYDYLGSNLDLGFLKNEKLLTNDLFNKGIDKYGGLNIFEEDYFKLEQDDDSLDENNLV 201 Query: 170 ENFTTN-LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++F N ++ L +PLIGR+KEL IQ++ R+ K+NP++ GE GVGKT + +GLA Sbjct: 202 DDFLVNVIDNLDPNLATNPLIGRKKELYTLIQIMLRKHKSNPIVFGEPGVGKTILLQGLA 261 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 + I +G VP + DC +YSLDIG L++GT+YRGD E R LL L ILFIDEIH Sbjct: 262 YIIREGQVPHELIDCEVYSLDIGRLISGTRYRGDLENRVNKLLDFLHFKKKVILFIDEIH 321 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 I+GAGA S +D +NL+KP+L+ GKI+ IG+TT E+ F KD+AL RRF +++ E Sbjct: 322 MIVGAGATSFSNIDVSNLLKPILTLGKIKFIGATTKNEYKKFFLKDKALLRRFHGVELKE 381 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 PS+E+T I+ G K +YE HH V YT +A+ A+ ++ KYI DR LPDKA D++D G++ Sbjct: 382 PSLEDTYHILKGAKEQYEKHHHVEYTDEAIWVAITMS-KYIKDRALPDKAFDLLDGLGSK 440 Query: 409 ARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIE 468 +L K + D+ V + + D+D L NL +++ + + + Sbjct: 441 FKLEGNKK---VITGDDVRDFVKYMVGTSIFNFDDYDQDLLMNLEHKIRTSMIIDESILS 497 Query: 469 ALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERH 528 L IK+ R ++ +G F+ G + V K ++ LS+ L + L MSEY + Sbjct: 498 ELLLHIKLLRIKFFFKNSTLGIFILIGSSDVDKNKLACVLSEELNMPKLTLGMSEYCDFD 557 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 ++RLIG G +D+ + + +++++L + +K+ V + + + G L D Sbjct: 558 GINRLIGPVYGSEAYDEPTKFFRFLNESLNSIIVLSDFDKSSKRVIDFFFEGFNTGRLFD 617 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNII 648 N GR ++++ N RE G+ ++ + D ++K F+ +F + +D++ Sbjct: 618 NFGRSVSLSGSIIIIDINIEYREL----DGIGFKNETVDIRSLLEKRFSNKFLDLVDHVF 673 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 +F +S +V+ + + L + + L + + + Y+ +G R + +++ Sbjct: 674 FFRPVSKSDFKRVIIEEVNNFVKILKNEKIDLFFEEAVIGYFQKHIYENGLGIRGIRKIV 733 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDK 737 + L ++L+ + ++ + LD Sbjct: 734 IKEIGSLLIDDLILKKFKENDKIRIFLDD 762 >UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F0302 RepID=D1QW31_9BACT Length = 815 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 215/823 (26%), Positives = 365/823 (44%), Gaps = 104/823 (12%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALL-SNPSAREALEACSVDLVALRQELEAF 61 + L ++ +A A AR+ +H V HL A++ RE L + D+ + + Sbjct: 7 STSLLAAIKLAKAMARQDKHHSYGVAHLATAMMTEQTGLREILTSMQKDVAYIMDWFDTH 66 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 E + + E D + VL A G + V V AI + + Sbjct: 67 KEMY---ISSGNEASDIIADGEVKLVLDEAERSKIKLGTDYVDALCVFTAIVRDGVVYSH 123 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 + VS D++++ + G+ P S + + ++L + Sbjct: 124 QQIEGLGVSEEDILDYFN-------------AGASPFSIGEEQEMPSSIQYASDLKRPEI 170 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 + +IGR KE+ ++ L R LLVG G+GKTAI + LA + E++ Sbjct: 171 LEEGKTIIGRSKEVRLILENLERAENKAVLLVGAPGIGKTAIVKALAHEVASNK-DELIN 229 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASGGQ 300 + +L+ +LA T + ++ ALL++L T ++L ID++ ++ G S Sbjct: 230 QTALVNLNTPKILAQTSSEAEVGQKITALLQKLNPSKTKAVLVIDDLQMLLENGNTSNAT 289 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT--EPSI------- 351 N++ +S G + ++ + + EK + R I++ EP+I Sbjct: 290 -SLINILDAQISEGTVTLVMLLSTDAYRKHIEKHP-IVNRLNVINVEQLEPNILKSALLG 347 Query: 352 --------------EETVQIINGLKPKYEAHHD---------------VRYTAK-AVRAA 381 EE + L +Y VR + K A Sbjct: 348 HKTQLQAHYSLAVTEEAIDSACSLANRYYKEKSQPASTLDLLDSTAASVRLSNKNAQETI 407 Query: 382 VELAVKYINDRHLPDKAID------VIDEAGARARLMPVSKR------------------ 417 +L Y P + + + ++ ++ +SK Sbjct: 408 TQLTETYQKYCKQPIEEVKDRDLHLLYHTIFSKISVVLISKIVDNFILTDEDTTQQKLEK 467 Query: 418 ---------------KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG 462 + V+ ++E+VVA IP + ++D L + +L V G Sbjct: 468 IGLILKELAEVSAKGMQAVSPLEVEAVVAGDTGIPIGKIQAQEKDRLLGIETKLCERVKG 527 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRF 519 Q+KAI L +AI +R+GL KP+GSF F GPTG GKTE+T L++ L + ++RF Sbjct: 528 QNKAITTLADAIIESRSGLSDPKKPIGSFFFLGPTGTGKTELTKSLAELLFDDDSAMIRF 587 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 DMSE+ E H+ + L GAPPGYVG+++GGLL + + P++V+L DEIEKAH V+++ LQ Sbjct: 588 DMSEFKEEHSAALLYGAPPGYVGYEEGGLLVTKIRQKPYSVVLFDEIEKAHSSVYDVFLQ 647 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPE 639 +MD G + D GR+ DF N +++ T+N G + ++ I HQ S + +E + K F PE Sbjct: 648 MMDEGKIHDKLGREGDFSNSIIIFTSNIGSQWIAQQ-IQEGHQPKSNELIEVMSKYFRPE 706 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNWLAEKGYDRA 698 F RL I+ F ++ V ++ LQ Q LDQK + ++++ E ++L EKGY Sbjct: 707 FLGRLTEIVPFSPITESVAQEIFMLQFSRLQKQLLDQKNIQVDLAPETISYLTEKGYSPQ 766 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNE 741 GARP+A VI+ LKK ++ ++ ++ G +V V + + Sbjct: 767 YGARPIAGVIRTYLKKTISKLIVSETIKQGDKVCVNYHEGNLQ 809 >UniRef50_A5FES3 ATPase AAA-2 domain protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FES3_FLAJ1 Length = 819 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 212/832 (25%), Positives = 384/832 (46%), Gaps = 108/832 (12%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP-SAREALEACSVDLVALRQELE 59 + + EL +L +A A+ + +++ + HLL A+L+ S + LEA D+ L + E Sbjct: 7 VFSAELLSALEIAKKIAKTNLNKYYSASHLLKAVLNRDLSLLKRLEAMGKDVYYLDEWAE 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 IE+ P + D +P+ +++ A + +E++ V++A+ S Sbjct: 67 VRIEEE----PKTTHVLDAEPSDLIDEIIKEAESVRIALNEDEISLYAVIIALSSPGVGF 122 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 ++ + +SR +++ + +Q + + + + N L Sbjct: 123 NFDQMKSYPISRNELLE------------DQIVIPQTESGAKQEVKKGFLSKYCIHKN-L 169 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 + P IGRE EL ++LCR K N LL+G+ G+GK+ + + L ++ VP+ Sbjct: 170 EKNKKRIPAIGREAELNAIKEILCRFSKPNVLLIGDRGIGKSILIDTLVQNVITNQVPDA 229 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + ++ LD+ SL+AG Y+G+ E R K +++L+Q +IL I I +GG Sbjct: 230 LNKVQLFELDLSSLIAGASYKGEIEDRLKNCIQELKQYPRAIL---IIEEIHILLDKNGG 286 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF------------------ 341 +N++K L+ G + +I ++T EFS EK++ L+ F Sbjct: 287 DSGVSNVLKGELAKG-LNIIATSTIDEFSKRIEKEQGLSGMFEIVKLEESDDETLFRMIR 345 Query: 342 ---------QKIDITEPSIEETVQIIN-GLKPKYEAHHDVRYTAKAVRAAVELAVKYIND 391 KI I + +I E++++ LK K + + ++N+ Sbjct: 346 ESIKTYQEHHKIQIDDETISESIRLSRRYLKEKSLPESAINLIDHTMSVLKTSGETFLNE 405 Query: 392 RHLPDKAIDVIDEAGARA----------------------------RLMPVSKRKKTVNV 423 + ++++ E + + + + Sbjct: 406 KQSIINRLNLLKENTSNLSEDQLIKEYNWFLVDLINKTTFLMDVDEQNEKRNFETSESIL 465 Query: 424 ADIES-----------------------VVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 IE+ ++A+ IP + + ++ L N+ + L V Sbjct: 466 NYIENLIKTLEEKALDKRSHIEAFDLSLIIAKKTGIPAGKLKEEEKQKLNNIEEVLNRRV 525 Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LL 517 GQD I + +I AR+GL +P+ SF F GPTG GKTE+ L++ L + ++ Sbjct: 526 IGQDHCIATVAGSILEARSGLSKAGQPIASFFFLGPTGTGKTELAKSLAEFLFQDENAII 585 Query: 518 RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNIL 577 RFDMSE+ E H+ + L GAPPGYVG+++GGLL + + + P++++L DEIEKAHP VF++ Sbjct: 586 RFDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQKPYSIVLFDEIEKAHPSVFDVF 645 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFT 637 LQ+MD G L D G++ DF N +++ T+N G + S ME + F Sbjct: 646 LQIMDEGKLHDRLGKEGDFSNAIILFTSNIGADHIV-NTFNNGEIPTSGSLMEIMGNYFR 704 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFI-VELQVQLDQKGVSLEVSQEARNWLAEKGYD 696 PEF RL I+ F +S + ++ + + E L + +E+ EA+ +LAE GY+ Sbjct: 705 PEFLGRLTEIVPFAPISKENALKIFEIHLKKEFMDLLKNINIKVEIPMEAKLYLAENGYN 764 Query: 697 RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 GARP+ +I+ +L++PLA +++ G + DG ++V + E NE+ + + Sbjct: 765 AKYGARPIKSIIRSHLRRPLAKKIISGEVKDGDTISVTI--ENNEVKWVKEE 814 >UniRef50_UPI00016B2080 clp protease ATP binding subunit n=4 Tax=candidate division TM7 RepID=UPI00016B2080 Length = 799 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 197/694 (28%), Positives = 332/694 (47%), Gaps = 32/694 (4%) Query: 65 TTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLL 124 TP L A+ +D + T + Q+ ++ + +G V G V +AI Q +L Sbjct: 124 LTPNLLANTASKDVKLT---DNLWQKVIYIKEKTGSEIVHGGVVALAILQ-QNPHCETIL 179 Query: 125 RKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPN---SEEQAGGEERMENFTTNLNQLAR 181 V DV+ I R + S D + + G ++ F L Sbjct: 180 AHMHVDENDVMECIRWYNRLQKIVDSGDSPKRTGGIARDWSFGYTPLLDRFGIRLGASRG 239 Query: 182 VGGIDPLIGREKEL-ERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI--VQGDVPE 238 + GR +E+ + I + N LVG +GVGKTAI A R+ D+P Sbjct: 240 LD-FSMESGRHQEIINQLINNFGTGGRQNAALVGPTGVGKTAILHSFASRLLDAAADIPN 298 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + ++ LD +L++ RG+ E +L + N I+ +D G Sbjct: 299 NLKFRQVFLLDSSALISAAPGRGELEGLVMRVLGEAFTAKNIIICLDNAQLFFEEG---V 355 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +D +N++ P+L +G +RVI + Q+F I ++ +L+ +I + EP ++T+ + Sbjct: 356 GSIDISNVLLPILEAGNLRVILTMDDQQFLQISHRNPSLSNALNRIVVGEPEKKDTITAM 415 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 E V Y +++ A L+ +YI+D +P +A+ +++ A A Sbjct: 416 QDQILTIEYKRKVIYMYQSLIEAYRLSERYIHDLAMPGRAVKLLESAANYAE------GG 469 Query: 419 KTVNVADIESVVARIARIPEKSVSQ-SDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 V + ++ + + + S DR+ L NL DR+ + Q A++A+++A++ A Sbjct: 470 GLVTMNSVQQAIEKTMDVKVSVASSADDREMLLNLEDRIHKRMINQTHAVKAVSDALRRA 529 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLI 534 RAG+ ++++P+G+FLF GPTGVGKTE+ L++ ++R D++EY+ VSRLI Sbjct: 530 RAGVRNQNRPIGTFLFLGPTGVGKTELAKALAEVYFGGEDNIVRLDLNEYVGLEDVSRLI 589 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 LT ++K P +V+LLDEIEKAHP+V LLQ++D G L D N R+ Sbjct: 590 ADA-----SSDPNSLTAKILKQPFSVVLLDEIEKAHPNVLTTLLQLLDEGILRDINNREV 644 Query: 595 DFRNVVLVMTTNAGVRETER-KSIGLIHQDNSTDAMEEI--KKIFTPEFRNRLDNIIWFD 651 FR+ +++ T+NAG G + + + E+ + F PEF NR D I F Sbjct: 645 SFRDAIVIATSNAGADRIREYIERGYKVEQFESQIVNELIKLQQFKPEFLNRFDEITVFS 704 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDN 711 L + QVVD + + L Q+ V ++V +A+ L E GYD +GARPM R+IQ Sbjct: 705 PLGKRELLQVVDIMLTGINKTLAQQKVQVKVDDDAKILLVENGYDPQLGARPMRRIIQKT 764 Query: 712 LKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 ++ +A E+L G + GG + + + + L Sbjct: 765 VENTVAKEMLSGLVSPGGIIEIHKHQIEEALGIN 798 >UniRef50_Q7NHQ2 ATP-dependent protease ATP-binding subunit n=1 Tax=Gloeobacter violaceus RepID=Q7NHQ2_GLOVI Length = 727 Score = 411 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 197/739 (26%), Positives = 335/739 (45%), Gaps = 56/739 (7%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIE 63 + + +A + + + H LLALL A +D +L Sbjct: 13 PGAKRLVELAQQKQQLSGQPHLQGAHWLLALLERHGAMVETMVGGLDAASLA-------G 65 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 Q L E + T VL+ A + ++ G+N ++ + AA + Sbjct: 66 QWQSRLAPGAAETPLEST----EVLELARANAEARGQNRIS-----------ERDMAAVI 110 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 L + + I+ T ++ PG +P + + +E F +L + A+ G Sbjct: 111 LARCGYRPAETDLLIA------IETTAAPPGYRPRARKP---TPMLERFGRDLTREAQQG 161 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 + +GRE+E++ I+ LCRR K NPLLVG +GVGKTAI EGLA R+V VP V+A Sbjct: 162 QLSAFVGREEEVQLVIETLCRRTKRNPLLVGPAGVGKTAIVEGLAQRLVASQVPAVLAGA 221 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 ++++ +L+AGT G+ E RFKALLK+ QD +LFIDE+H+++GAG +G D Sbjct: 222 RLFAVQPSTLVAGTSVVGELENRFKALLKEASQDG-VLLFIDEVHSVVGAGGRAGTD-DV 279 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP 363 A+L+KP L+ G+I I +TT EF E D AL RRFQ I I E + E+T+ ++ L Sbjct: 280 ASLLKPALARGEIACIAATTDDEFRRYIEPDAALERRFQPIRIQELNAEQTLAVLRALAH 339 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNV 423 + V+ A+ V+ A +++ +R PDKAID++++ A V++ K V++ Sbjct: 340 ELGQLRGVQVGEAALSWLVDFAAQFLPNRRFPDKAIDLLEQCVA----FAVARDKGAVDL 395 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG- 482 +D +V R+ +P L L L V ++ I+AL + + L Sbjct: 396 SDATAVARRMVGMPVAVAE-----RLTALRRELPGRVALVEEDIQALVGRLNVTLRSLDL 450 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPG 539 +P + L + L++ L ++ D + +S L+GAPPG Sbjct: 451 RPARPNAALLLVDRAAALGEALGGALAELLFGSAERVIAIDFGSFTSPADLSMLLGAPPG 510 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+ L + + P VL D + HP + +L Q +++G TD +G++A + Sbjct: 511 YVGYAD-TLPIHRLAQMPWCVLRCDNVHACHPQIREVLAQALESGFFTDAHGKRAYLSDA 569 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTD-----AMEEIKKIFTPEFRNRLDNIIWFDHLS 654 V+++T ++S+G + + D ++ + F R D + Sbjct: 570 VVLITAEVA--LASQRSLGFAGERPAADSESPGVIQSASAVLGAGFVGRCDLVFAAAAGV 627 Query: 655 TDVIHQVVD-KFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + + + +L + ++G+ L WLA++ R+ G R R++ + L Sbjct: 628 DAAQQRWLRERLLADLSARYRRQGLELHWDDSLVQWLADQHTSRS-GPRDWERLVDERLS 686 Query: 714 KPLANELLFGSLVDGGQVT 732 L L G V V Sbjct: 687 PALIEYLPPGEQVRSLVVR 705 >UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 RepID=C9MS36_9BACT Length = 813 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 207/822 (25%), Positives = 353/822 (42%), Gaps = 102/822 (12%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALL-SNPSAREALEACSVDLVALRQELEAF 61 + L ++ +A A A + +H V HL++A+L RE L + ++ + E + Sbjct: 7 SNSLIAAIKLAKAMAHQDKHLSFGVAHLVIAMLTEQTGLREILNSMQKEVTYISDWFETY 66 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 E V + E + VL A G + V V AI + + Sbjct: 67 REMYVGVEHDAGE---IIADHEVETVLDEAERSKIKLGTDSVDALCVFSAIVRDGVVYSH 123 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 + V+ +++ + T P D GS + ++L + Sbjct: 124 QQIESIGVTEDEIMEYFEASTSPLSPVAEMDMGSSI-------------QYVSDLRRAEL 170 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 + +IGR KE+ ++ L R + LLVG GVGKT I LA + + + E++ Sbjct: 171 LEEGKSIIGRSKEIRLILETLERSERQGILLVGAPGVGKTGIIRALAHEM-EINQDEIIN 229 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGAASGG- 299 ++ L+ +LA + + ++ LL+++ Q +L ID++ ++ +G + Sbjct: 230 QTSLVGLNTSKILAQSGNETEITQKLTGLLQKMNQAKSRGVLVIDDLQLLLESGNPTAAT 289 Query: 300 ---------------------QVDA-----------------------ANLIKPLLSSGK 315 +DA N+++ L + Sbjct: 290 YILNNLDAQICDGAVTLLMVLSMDAFRKHIEKHSIANRLNIINVEELEPNILRSALLKHR 349 Query: 316 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ---------------IING 360 + + F L+ R+ K S + + I+ Sbjct: 350 TILQAYYSLPMTEEAFISAYNLSNRYYKEKSQPASTLDLIDSTAASVRLSNKNAAGIVEQ 409 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLP---------------DKAIDVIDEA 405 L +YE + + + L I ++ D + +D+ Sbjct: 410 LVEQYEKYKAMPV-DDVSDFDLHLLYHTIFNKVSVVLTSKIEDDFVLTDDDSTQEKLDKL 468 Query: 406 GARARLMPV--SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 G + V K + V+ +IESVVA IP + ++D L + +L V GQ Sbjct: 469 GKMLNELSVLSQKGIEKVSSLEIESVVADDTGIPIGKIQAQEKDRLLGIETKLHERVKGQ 528 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFD 520 DKAI L++AI +R+GL KP+GSF F GPTG GKTE+T L+ L + ++RFD Sbjct: 529 DKAIRTLSDAIIESRSGLSDPKKPIGSFFFLGPTGTGKTELTKSLADLLFDDDTAMIRFD 588 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MSE+ E H+ + L GAPPGYVG+++GGLL + + P++V+L DEIEKAH V++I LQ+ Sbjct: 589 MSEFKEEHSAALLYGAPPGYVGYEEGGLLVTKIRQKPYSVVLFDEIEKAHSSVYDIFLQI 648 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEF 640 MD G + D GR+ DF N +++ T+N G + + I HQ S + +E + K F PEF Sbjct: 649 MDEGKVHDKLGREGDFSNSIIIFTSNIGSQWIAEQ-IQKGHQPTSNELIEVMSKYFRPEF 707 Query: 641 RNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNWLAEKGYDRAM 699 RL ++ F ++ V Q+ LQ Q L+QK + L+++ E +L KG+ Sbjct: 708 LGRLTEVVPFSPITEAVAQQIFLLQFSRLQKQLLEQKDIQLDLAPETIAYLTSKGFSPQY 767 Query: 700 GARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNE 741 GARP+A V++ LKK ++ ++ ++ G + + Sbjct: 768 GARPIAGVVRTYLKKTISKLIVSEAIKPGDHIIATYKDGNLQ 809 >UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms RepID=Q93ZM4_ARATH Length = 558 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 164/441 (37%), Positives = 256/441 (58%), Gaps = 12/441 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++ + ++ AR H F+ E +LL L+ + A + L++ ++L R E+E Sbjct: 118 FTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVE 177 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + + + T +RVL+ ++ + G N + ++L+ + E E Sbjct: 178 KIIGRG-----SGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 232 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L ++ + ++ +S G +E + TNL +L Sbjct: 233 AARVLENLGADPSNIRTQVIRMVGENNEVTASVGGGSS----GNSKMPTLEEYGTNLTKL 288 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP++GR+ ++ER +Q+L RR KNNP L+GE GVGKTAIAEGLA RI GDVPE Sbjct: 289 AEEGKLDPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPET 348 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + T+ +LD+G L+AGTKYRG+FE+R K L++++ Q ILFIDE+HT+IGAGAA G Sbjct: 349 IEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGA 408 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G+++ IG+TT E+ EKD AL RRFQ + + EP++E +QI+ Sbjct: 409 -IDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEGAIQILQ 467 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GL+ +YE HH +RYT +A+ AA +L+ +YI+DR LPDKAID+IDEAG+R RL ++ Sbjct: 468 GLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE 527 Query: 420 TVNVADIESVVARIARIPEKS 440 + + + + Sbjct: 528 ARELEKQLRQITKEKNEAVRK 548 >UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SIE3_VERA1 Length = 744 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 213/672 (31%), Positives = 328/672 (48%), Gaps = 90/672 (13%) Query: 156 QPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGE 215 + + + +E F +L Q A+ G +DP+IGR+ E++R IQ+L RR KNNP+L+G Sbjct: 67 RMDMGGGEPEKPALEQFGIDLTQRAKDGKLDPVIGRDSEIQRTIQILSRRTKNNPVLIGN 126 Query: 216 SGVGKTAIAEGLAWRIVQGDVPEVMADCTI----------------------------YS 247 +G GKTAI EGLA RIV+GDVPE + + S Sbjct: 127 AGTGKTAILEGLALRIVRGDVPESVKNKRSSMRFRRPRAKSSSSSTSYTRSLVSARPKAS 186 Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV------ 301 +D +LL RG+ + L + Q + I+ + + Sbjct: 187 IDASNLLKPALARGELQCCGATTLDEYRQIEKDVALARRFQPIMVNEPSVQDTISILRGI 246 Query: 302 --------------DAANLIK--------PLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 +AA+ +K +++ + + + EKD A Sbjct: 247 KDKFLPDKAIDLMDEAASHLKLQHESKPEDIMALDQKIMTIQIELESLRK--EKDVASRE 304 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK------------ 387 R +K+ E ++ + I GL ++E R +AV+ A E K Sbjct: 305 RREKL---ETDLKALQEEILGLTTRWEKE---RAEIEAVKNAQEELDKAKVELDVAQREG 358 Query: 388 -YINDRHLPDKAIDVIDEAGARARLMPV-SKRKKTVNVADIESVVARIARIPEKSVSQSD 445 + L I ++E + S +V DI +VV+RI IP ++ Sbjct: 359 NFGRAGELRYSVIPFLEEKIPKEEDKQDGSLIHDSVTADDIAAVVSRITGIPVSKLTSGH 418 Query: 446 RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVT 505 L ++ D L+ V GQD+AI+A++ A+++ RAGL +++P+ SF F GPTGVGKTE+ Sbjct: 419 IQKLVHMEDALQASVRGQDEAIKAVSNAVRLQRAGLSGDNRPLASFFFLGPTGVGKTELC 478 Query: 506 VQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLL 562 +L+ L ++RFDMSE+ E+HT+SRLIGAP GYVG++ G LT+AV + P+AVLL Sbjct: 479 KKLAGFLFSTESAVVRFDMSEFQEKHTISRLIGAPSGYVGYEDAGQLTEAVRRKPYAVLL 538 Query: 563 LDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET---------E 613 DE EKAH D+ +LLQV+D G LTD G K DFRN ++V T+N G Sbjct: 539 FDEFEKAHRDISALLLQVLDEGYLTDAQGHKVDFRNTIIVFTSNLGADILVGANSSHPYT 598 Query: 614 RKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL 673 G + D M+ + + PEF NR+D+ I F L+ + +VD + ELQ +L Sbjct: 599 ETEDGDVSPDVRKAVMDVVASAYPPEFLNRIDSFIVFKRLAKMALRDIVDIRLRELQARL 658 Query: 674 DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTV 733 D + ++L VS + R+WLAE+GYD GARP+ R+I + + LA+ ++ G L G V Sbjct: 659 DDRRITLNVSSDVRDWLAERGYDPRFGARPLNRLITNEIGNGLADRIIRGELKMGETAEV 718 Query: 734 ALDKEKNELTYG 745 + ++ + L Sbjct: 719 VIKEDGSGLEVK 730 >UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n=12 Tax=Bacteroidales RepID=Q64SE5_BACFR Length = 812 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 193/818 (23%), Positives = 359/818 (43%), Gaps = 97/818 (11%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE-ALEACSVDLVALRQELEAF 61 + L +L +A A + +H V HL++A+ + + + L + D+ + + + Sbjct: 7 SPSLVSALKIARGMALQDKHNTFGVSHLVMAMFAENTGLKEILSSMQKDVGYIMEWFDTH 66 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 E + + +P +VL + G + + V AI E + Sbjct: 67 REMY---RSSGTSTEEVEPDEEVSKVLDESERSKIKLGADSIDSICVFTAILREGVVYSH 123 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 + +VS D+++ + T + + NL + Sbjct: 124 QQIEILDVSEDDILSHYNALTPLHSYQGEEMQITASV------------PYADNLKKQET 171 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 + ++GREKE+ ++ L R L+VGESG+GK++I I + + E++ Sbjct: 172 INAGGFVVGREKEVRTILECLERSENKGILIVGESGIGKSSIINAFVKDICENE-DEMLK 230 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ- 300 +I L+ LLA T + ++ L+ +L Q ++L ID++ ++ + Sbjct: 231 QISIVGLNTAKLLASTSSETEIAQKVVNLMHKLNQLEQAVLVIDDLQVLLENSVSGKAST 290 Query: 301 ----------VDAANLIK--------------PLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 AANL+ P+ I I + + + Sbjct: 291 LINILSAQISEGAANLVLTLTNDSYRKNIEKHPIEGRLDIIKIEELDTATLESAIQLHKK 350 Query: 337 LARRFQKIDITEPSIEE-----------------TVQIINGLKPKYEA------------ 367 + ++ I++ I++ + +++ Sbjct: 351 RIENYYELRISDACIKDSIALSKRYFKERSLPSAAIDLLDRTAAAVRLCNKNARASVSDL 410 Query: 368 ---HHDVRYTAKAVRA-AVELAVK------------YINDRHLPDKAIDVIDEAGARARL 411 +++ + + + L + ++D ++ DK D+ +AG + + Sbjct: 411 EADFEEIKSLDEKISEGPLYLLYRSVFSKISVVLTTKLSDNYVWDKEDDIAIKAGRLSGI 470 Query: 412 MPV-----SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKA 466 + + + + ++IE++VA IP + ++D L ++ +L+ V GQ++A Sbjct: 471 IKELKALSDQSIEEIRSSEIEAIVAECTNIPIGKIQAREKDRLLSIESKLQERVKGQNRA 530 Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSE 523 I L++AI +R+GL KP+GSF F GPTG GKTE+T L++ L + ++RFDMSE Sbjct: 531 ITTLSDAIIESRSGLSDPKKPIGSFFFLGPTGTGKTELTKSLAELLFDDESAMIRFDMSE 590 Query: 524 YMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDN 583 + E H+ + L GAPPGYVG+++GGLL + + P++V+L DEIEKAH V+++ LQ+MD Sbjct: 591 FKEEHSAALLYGAPPGYVGYEEGGLLVTQIRQKPYSVVLFDEIEKAHSSVYDVFLQMMDE 650 Query: 584 GTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNR 643 G + D GR+ DF N +++ T+N G + + I H +S +E + + F PEF R Sbjct: 651 GKIHDKLGREGDFSNSIIIFTSNIGSQWIVEQ-IQSGHTPDSGKLIEVMAQYFRPEFLGR 709 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 L ++ F + +V Q+ + LQ QL QK + L +S EA LA KGY GAR Sbjct: 710 LTEVVPFAPIDENVAKQIFNLHFGRLQEQLMKQKNIQLNLSDEALQHLANKGYSPKYGAR 769 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 P+A VI+ +KK ++ ++ + G + + + Sbjct: 770 PIAGVIRTYIKKSVSRLIVSEQIKSGDNIVINYRNGEL 807 >UniRef50_Q1D2Y8 ClpA/B family protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D2Y8_MYXXD Length = 1127 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 173/645 (26%), Positives = 301/645 (46%), Gaps = 21/645 (3%) Query: 113 FSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAG-GEERMEN 171 E ++ A +L + + E T P + + + Sbjct: 159 LLEVDAYAPSVLPRTPPRPAQPARRRRTKNPEKEDTAPETPEQREQRRNRRRLTLVELRA 218 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 NL+ AR G ++ GRE + ++ L R + +LVG G GKTA+ R+ Sbjct: 219 VARNLSHGARDGTLERCFGREALVRELVEALEGREGSALVLVGPPGAGKTALIHEAVSRL 278 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 + ++ +D +AG Y G +E R + ++K+L + + +L++D++ +++ Sbjct: 279 TARQDAAGVR-RDVWRVDGNQFIAGMMYVGQWEARARGVVKELMEVGD-LLYVDDLASLV 336 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 AG + + A ++P ++ G++ V+ +T + F + E+ LA F+ I + Sbjct: 337 YAGRTRNERTNVAQFLEPHMARGELTVLAESTPERFERVREEAPTLASLFRVIHVPALDA 396 Query: 352 EETVQIINGLKPKYEAHH---DVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 T+ + G EA V+ + A+ + L ++++ P KA+ ++ A Sbjct: 397 RATLPALLGTVRDLEAEGTDSAVQLSPLALETLLSLQERFVSHEAFPGKAVRLLRRVMA- 455 Query: 409 ARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIE 468 R + + + D+ + +P+ + + + L ++ V GQ +A+E Sbjct: 456 -RQGVSTSGTRRFSSGDVIDAMREQTGLPDFILGSAQPKKREALTWEMQRQVAGQPEAVE 514 Query: 469 ALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYM 525 A+ +AI ++ L KP+ ++LF GPTGVGKTE L++ L L+RFDMSE++ Sbjct: 515 AVVDAILTLQSALQPSDKPLATYLFVGPTGVGKTETAKALARTLFGGEQRLIRFDMSEFV 574 Query: 526 ERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGT 585 +++RL+G P G LT A+ P V+L DE+EKAHP VF+ LLQ + G Sbjct: 575 TSSSITRLLGRPGA-----PDGELTTALRTQPFCVVLFDEVEKAHPRVFDALLQFLGEGR 629 Query: 586 LTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA--MEEIKKIFTPEFRNR 643 LTD GR D R V+V+T+N GVRE + G +S DA + ++ F PEF NR Sbjct: 630 LTDGAGRTVDARQSVVVLTSNLGVREAATHT-GFHRAADSADAHYLSAVRAWFRPEFFNR 688 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK--GVSLEVSQEARNWLAEKGYDRAMGA 701 LD ++ F L+ + VVD + L + + V +EV + L E+ YD GA Sbjct: 689 LDRVVPFRPLTPAALRVVVDLALEALLSRHGIRQGNVLVEVEPRLLDLLVEEAYDPRYGA 748 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGF 746 RP+ R ++ L PLA+ L+ S D +V + D ++ Sbjct: 749 RPLKRALEKRLTLPLAHHLVRRSADDLARVELLRDGNDMRVSVEV 793 >UniRef50_B9Y438 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y438_9FIRM Length = 665 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 193/719 (26%), Positives = 347/719 (48%), Gaps = 67/719 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 + + + ++ A AR+ ++ F+ EHLL+ +L + + ++ L + L+++++ Sbjct: 5 FDPQAQKAIQSARTVARQMKNTFIGTEHLLIGILQTDHSALQKLLSERGITAEQLKEDIQ 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 EE R T+ T + Q +L++ + S +T + + + Sbjct: 65 VLFGFNE------EETRQTEYTQTVQEILEKCLVEAARSTPPVITLKMLTRTLLETPNNV 118 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A+ LLR+++V D+ I R+D + +S NLNQ Sbjct: 119 ASELLRRYDV---DIAGLIVELNRQDIDSLNSIRE------------------LRNLNQW 157 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 ++ R+ ++ I++LCR+ K NPLL+G+ GVGKTA+ E LA I QG+VP+ Sbjct: 158 -MANRPSNIVERQAQMNSIIRILCRKEKANPLLLGDPGVGKTALVEQLAKSIDQGEVPDC 216 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + I+ L + L+AGTKYRG+FE++ + +L L Q ILFIDEIH IIGAG A G Sbjct: 217 LRGSVIFELSVNGLVAGTKYRGEFEEKIQKILDALRQFPQVILFIDEIHQIIGAGKAE-G 275 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D A ++KP+L+ G+IR IG+TTY E+ EKDRAL RRFQ + I EP ++ ++I Sbjct: 276 SIDVAGVLKPVLARGEIRCIGATTYDEYLKFIEKDRALQRRFQPVMIEEPDLDSARRMIE 335 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 P+YE HH +++ + V +E ++ R LPDKA+DVID A A AR+ S Sbjct: 336 AKIPEYEQHHQIQFPMELVGPLMESTQYFMPSRKLPDKALDVIDLACASARMDHRS---- 391 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 TV D++ ++ ++ +P + + DR + RL+ + GQ++ + + + ++ Sbjct: 392 TVAQRDVDQILEQLTDVPLQDRCRKDR-----VMQRLRRELIGQEEILTQIDQQLQWMEL 446 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGA 536 G+ +P+G +L G K + L++ + DM +Y + R + Sbjct: 447 GVVQ-DRPLGVWLLCGKQVSLKQRLAKVLAQLYFGQNDRRIEVDMMDYQDSQAGYRFVH- 504 Query: 537 PPGYVGFDQGGLLT-DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 G DQ L + + + P+++L + ++ A P+ IL + ++ G + + GRK D Sbjct: 505 -----GQDQQYSLWLEKLRRSPYSLLFIRNLDAARPECAAILRKGIEQGLIEEEAGRKVD 559 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 R+ ++++ T R + + +EI D I+ F L + Sbjct: 560 LRHCLILLDTEQ-SRTVSGLGFQAVSVKMENEGWDEIA-----------DAILDFRTLDS 607 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + + + + E+ Q+ Q ++ E+ ++ + +G D R + + KK Sbjct: 608 AEMETLARRRLQEITRQMPQ--LAFELGEDTPFDI--EGEDPEKIDRQIRSYLTKRFKK 662 >UniRef50_UPI00016C3DF7 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DF7 Length = 1108 Score = 396 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 193/779 (24%), Positives = 333/779 (42%), Gaps = 54/779 (6%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 +L + + A R+ RH+ + A+ ++ +VD+ LR+ + Sbjct: 36 LLTKLTRELVEHLEALGRKERHDELAAWAFCPAVTAH--------RTTVDVE-LRRRVAR 86 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRV-LQRAVFHVQSSGRNEVTGANVL-----VAIFS 114 VL R T + + + V + + Sbjct: 87 ---TKYLVLAFDHLGRRLAFTPAVPELWFEVPRGEPLEDRAQAVYTEHWRGVERDADVDE 143 Query: 115 EQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTT 174 E + L K V LD+ + K P G + + Sbjct: 144 EVRPELGSLSGKAWVQVLDLSASVPAVVPKKPPANFLSLGGGETGDGATE----LRRVGR 199 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 L +D + R++E+ ++L + LL G VGK+AI +R V Sbjct: 200 CL-DWLYPDELDRAVLRDREVNELHRLLELGDRRPVLLCGPRLVGKSAIVHECVYRRVAE 258 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 + + L++G Y G +E R A+LK ++ + +L+ D++ + AG Sbjct: 259 RKANQRQWFNTWLVSPQRLISGMSYVGQWEGRLLAILKHAKKR-DHVLYFDDLLGLFLAG 317 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 S + AA ++KP L +RV+ T + + E+DR L+ F I + +P+ +T Sbjct: 318 VTSQSSLSAAVVLKPYLERRDVRVLAEITPESLRVLQERDRGLSDLFHIIPVRQPTDADT 377 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV 414 ++++ + + E H + + A ++ +Y P KA V+ RA P Sbjct: 378 LRVLVDQQRRLEGKHACVFGLDVLPAVIDQQRRYDRTAAFPGKAAAVLTRLAVRATTNPD 437 Query: 415 S------------------KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL 456 + + D+ + A + + + R + D+L Sbjct: 438 ERAAEVGSSATRPADGYEFPPRPEITRDDVLNDFAARSGLSLAFLDPKQRLDRDAVRDKL 497 Query: 457 KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE- 515 + V GQ A++AL + + +A+A L +P+ +FLF GPTGVGKTE +++ L + Sbjct: 498 QEQVIGQPDAVDALADVVSVAKARLNDPDRPLAAFLFLGPTGVGKTECAKAIARTLFGDS 557 Query: 516 --LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV 573 LLRFD++EY + +RL+G GLLT A+ + P AV+LLDEIEKA P+V Sbjct: 558 DRLLRFDLNEYNQPGAAARLVGTF-----QQPEGLLTSAIRRQPFAVVLLDEIEKADPEV 612 Query: 574 FNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIK 633 F++LLQ++ G LTD+ GR ADF + +++MT+N GVR+ E + D S + Sbjct: 613 FDLLLQLLGEGRLTDSLGRTADFTSALVLMTSNLGVRDAEGNLGFVTEADRSFAYTRAAE 672 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLA 691 K F PEF NRLD +I F LS + + ++ + + E+ + Q+ L V+ +A + + Sbjct: 673 KFFRPEFFNRLDRVIPFRKLSREEMARIARRLVGEVLAREGFSQRKCVLNVAPDALDRVI 732 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 + GYD A+GAR M R ++ L +P A+ L L V + L Q+ + Sbjct: 733 QAGYDPALGARAMKRAVEHELTQPAASRLAA--LAVNDLTIVTVRAAAGTLAVDVQAPE 789 >UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organisms RepID=CLPB_CORDI Length = 849 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 185/554 (33%), Positives = 280/554 (50%), Gaps = 31/554 (5%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEA 60 + + +L A +A + + EHLL A+L + A L A VD +R+E EA Sbjct: 7 TTKTQEALQEALQKASAAGNPDIRPEHLLAAILGQEDGIAIPVLRATGVDPDVVRREAEA 66 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + + VL A G V+ +L A+ + A Sbjct: 67 LVAKLPK--AEGANLANPNFNRDALSVLNNAQELAGELGDEYVSTEVLLAAVAR-GTNDA 123 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A LL K + + + +E + +E ++T+L A Sbjct: 124 AELLTKRGATYDVIKGVFPSVRG----------NKKVTTESPEDQFQALEKYSTDLTARA 173 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 R G IDP+IGR++E+ R +QVL RR KNNP+L+GE GVGKTAI EGLA RIV GDVPE + Sbjct: 174 REGKIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESL 233 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASGG 299 T+ SLD+GS++AG KYRG+FE+R KA+L +++ + I FIDE+HTI+GAGA Sbjct: 234 KGKTLISLDLGSMVAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDS 293 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DA N+IKPLL+ G++R++G+TT E+ EKD AL RRFQ++ + EPS+E+ V I+ Sbjct: 294 AMDAGNMIKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAVGILR 353 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLK +YE HH VR A+ AA L+ +YI R LPDKAID++DEA +R R+ S ++ Sbjct: 354 GLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQE 413 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD----------RLKMLVFGQDKAIEA 469 + I + K + +D L L L + AI Sbjct: 414 IDELERIVRRLEIEEVALSKETDAASKDRLIKLRQELADEREKLGELVARWNNEKGAINK 473 Query: 470 LTEA---IKMARAGLGHEHKPVGSFLFAGPTGVGKT-EVTVQLSKALGIELLRFDMSEYM 525 + EA ++ R+ + G + G+ E+ Q+++A + +SE + Sbjct: 474 VREAKEELERLRSESEIAER-DGDYGKVAELRYGRIPELEKQVAEAEEHTVETTMLSEEV 532 Query: 526 ERHTVSRLIGAPPG 539 T++ ++ A G Sbjct: 533 TPDTIAEVVSAWTG 546 Score = 354 bits (908), Expect = 8e-96, Method: Composition-based stats. Identities = 214/800 (26%), Positives = 338/800 (42%), Gaps = 92/800 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSVDLVALR----- 55 N++ LN A A E E+++ E LL A+ A E L ++ Sbjct: 84 FNRDALSVLNNAQELAGELGDEYVSTEVLLAAVARGTNDAAELLTKRGATYDVIKGVFPS 143 Query: 56 ----------------QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS- 98 Q LE + T + + +RV+Q +++ Sbjct: 144 VRGNKKVTTESPEDQFQALEKYSTDLTARAREGKIDPVIGRDQEIRRVVQVLSRRTKNNP 203 Query: 99 ---GRNEVTGANVLVAIFSE------QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQ 149 G V ++ + ES L ++ + + Sbjct: 204 VLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLISLDLGSMVAGAKYRGEFEERLKAV 263 Query: 150 SSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGG--IDPLIGREK----------ELER 197 + S E A G I PL+ R + E + Sbjct: 264 LDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNMIKPLLARGELRLVGATTLDEYRK 323 Query: 198 AIQ---VLCRRRKNNPLLVGESGVGKTA-IAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 I+ L RR + + VGE V I GL R + + + + Sbjct: 324 YIEKDAALERRFQQ--VFVGEPSVEDAVGILRGLKERYEVHHGVRIQDSALVAAATLSDR 381 Query: 254 LAGTKYRGDFEKRFKALLKQLEQDTNSILF-----IDEIHTIIGAGAASGGQVDAANLIK 308 +++ + L+ + + IDE+ I+ +++ L K Sbjct: 382 YITSRFL---PDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRL-----EIEEVALSK 433 Query: 309 PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH 368 ++ K R+I QE ++ EK L R+ E V+ + + Sbjct: 434 ETDAASKDRLIKL--RQELADEREKLGELVARWN----NEKGAINKVREAKEELERLRSE 487 Query: 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIES 428 ++ EL I + A A + + + V I Sbjct: 488 SEIAERDGDYGKVAELRYGRIPELE--------KQVAEAEEHTVETTMLSEEVTPDTIAE 539 Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 VV+ IP + Q + + L N+ L V GQ +A+ A+++A++ ARAG+ ++P Sbjct: 540 VVSAWTGIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVADPNRPT 599 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQ 545 GSFLF GPTGVGKTE+ L++ + + ++R DMSEY E+H V+RL+GAPPGYVG+DQ Sbjct: 600 GSFLFLGPTGVGKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARLVGAPPGYVGYDQ 659 Query: 546 GGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTT 605 GG LT+AV + P+ V+L DE+EKAHPDVF+ILLQV+D G LTD GR DFRN VL++T+ Sbjct: 660 GGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILTS 719 Query: 606 NAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKF 665 N G + M+ +K+ F PEF NRLD+++ FD LS + + +V+ Sbjct: 720 NLGA------------GGTKDEMMDAVKRAFKPEFVNRLDDVVIFDPLSQEQLTHIVEIQ 767 Query: 666 IVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSL 725 I +L +L + ++L VS A+ WLAE+GY+ A GARP+ R+IQ + LA +LL G + Sbjct: 768 IAQLAQRLAARRLTLAVSDSAKLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKLLSGEV 827 Query: 726 VDGGQVTVALDKEKNELTYG 745 DG +V V D + + L Sbjct: 828 RDGSEVHVDADLDNDGLVIS 847 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 35/101 (34%) Query: 80 PTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFIS 139 PT Q LQ A+ ++G ++ ++L AI +++ A +LR V V Sbjct: 6 PTTKTQEALQEALQKASAAGNPDIRPEHLLAAILGQEDGIAIPVLRATGVDPDVVRREAE 65 Query: 140 HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 K + ++ + + + + L Sbjct: 66 ALVAKLPKAEGANLANPNFNRDALSVLNNAQELAGELGDEY 106 >UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FCQ4_9BIFI Length = 910 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 161/436 (36%), Positives = 249/436 (57%), Gaps = 15/436 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 L ++ A A + + V HLL ALL R +EA D A+ + Sbjct: 6 LTNMSREAITDAVQSASAAGNAQIDVLHLLNALLTQEQGVVRGLIEAAGGDAKAIGTAVR 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + QP+ F+ L ++ +Q G ++ ++L+ I + +Q Sbjct: 66 NALTNLPS--ASGSTTAQPQPSRQFEAALVQSEKEMQQMGDEYISTEHLLIGIAAAAPNQ 123 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 AA +L+ + V+ + + D S D G + +E ++T+L Sbjct: 124 AADILQANNVTAQALRAAVPTVRGGDRKVTSPD---------AEGSYKALEKYSTDLTAA 174 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G +DP+IGR++E+ R IQ+L RR KNNP+L+GE GVGKTA+ EGLA RIV GDVP Sbjct: 175 AKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTT 234 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASG 298 + + + SLD+GS++AG+KYRG+FE+R K++L++++ + I FIDEIHTI+GAGAA Sbjct: 235 LQNKKLISLDLGSMVAGSKYRGEFEERLKSVLEEIKNANGQIITFIDEIHTIVGAGAAE- 293 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA N++KP+L+ G++R+IG+TT E+ EKD AL RRFQ++ + EPS+E+T+ I+ Sbjct: 294 GSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAIL 353 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 G+ PKYEAHH V A+ AA L+ +YI+ R LPDKAID++DEA A R+ S + Sbjct: 354 RGIAPKYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPE 413 Query: 419 KTVNVADIESVVARIA 434 + + + Sbjct: 414 EIDELTRQVERLKMEK 429 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 201/802 (25%), Positives = 345/802 (43%), Gaps = 83/802 (10%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALR----- 55 +++ E +L + ++ E+++ EHLL+ + + + + L+A +V ALR Sbjct: 85 SRQFEAALVQSEKEMQQMGDEYISTEHLLIGIAAAAPNQAADILQANNVTAQALRAAVPT 144 Query: 56 -----------------QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS 98 + LE + T + + +RV+Q +++ Sbjct: 145 VRGGDRKVTSPDAEGSYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNN 204 Query: 99 ----GRNEVTGANVLVAIFSEQE-SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDP 153 G V V+ + L+ ++ LD+ + ++ + E + Sbjct: 205 PVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKS 264 Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREK-----ELERAIQVLCRRRKN 208 + ++ T + A G +D + EL + Sbjct: 265 VLEEIKNANGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEYRE 324 Query: 209 NP------------LLVGESGVGKT-AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 255 N + VGE V T AI G+A P+ A + D + A Sbjct: 325 NIEKDPALERRFQQVFVGEPSVEDTIAILRGIA--------PKYEAHHKVTIGDDALVAA 376 Query: 256 GT---KYRG--DFEKRFKALLKQLEQDTNSILF-----IDEIHTIIGAGAASGGQV---- 301 T +Y + L+ + L IDE+ + + Sbjct: 377 ATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELTRQVERLKMEKSYLLGNP 436 Query: 302 ---DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP---SIEETV 355 AA+ + L + +E +N EK L R+ + + + Sbjct: 437 KNDKAADKAEAELDDSAKDRLADLN-KEIANKSEKLNGLKARWDAEKSGHNRIGDLRKKL 495 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 + +YE D+ ++ + K I ++ + A A V Sbjct: 496 DELRTQAERYEREGDLAKSSAINYGEIPNIQKEIAQAEKNEQNVKNGSNAANTA--ADVP 553 Query: 416 KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIK 475 V+ + +V+ IP + Q + + L + D L V GQ +AI+A+++A++ Sbjct: 554 MVPDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLTMEDYLGKRVIGQKEAIKAVSDAVR 613 Query: 476 MARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSR 532 +RAG+ ++P GSFLF GPTGVGKTE+ L+ L + ++R DMSEYME+ +VSR Sbjct: 614 RSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSR 673 Query: 533 LIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGR 592 LIGA PGYVG++QGG LT+AV + P++V+L DE+EKA+P++F++LLQV+D+G LTD GR Sbjct: 674 LIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQVLDDGRLTDGQGR 733 Query: 593 KADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDH 652 DF+N +L+MT+N G + + + + M+ + F PEF NRLD+ + F Sbjct: 734 TVDFKNTILIMTSNLGSQFLVNEDM--DDEAKRKAVMDTVHMNFKPEFLNRLDDTVMFHP 791 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 L+ + + +VD + + +L + ++L+V+ AR WLA GYD A GARP+ R++Q + Sbjct: 792 LTREELGGIVDIQVANVSARLTDRRITLDVTDSAREWLANVGYDPAYGARPLRRLVQTEV 851 Query: 713 KKPLANELLFGSLVDGGQVTVA 734 LA LL G + DG V V Sbjct: 852 GDQLARMLLAGKVHDGDTVLVD 873 >UniRef50_A6GDL3 ClpA/B family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDL3_9DELT Length = 1236 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 169/675 (25%), Positives = 287/675 (42%), Gaps = 61/675 (9%) Query: 82 LSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISH- 140 Q V QRA + G LR L +V F Sbjct: 133 ELAQVVFQRAWSEAELLGPE-------------------LDWLRTQGREHLRLVGFRGQP 173 Query: 141 --GTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERA 198 E ++ + + G + + TNL A + P + RE E+ Sbjct: 174 PTLLGSLERKSKGPEMARIGTRRRTAGVGLLHDLGTNLTHKAGQDELRPGMPREPYREQL 233 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD----CTIYSLDIGSLL 254 Q+LC RK LL+G GVGKT + L I+ D + ++ + ++ Sbjct: 234 RQLLCGERKAPVLLIGPPGVGKTTLLHRLVLDILDADGWAAHQNLDRVHHVWQISGRRII 293 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 AG Y G +EKR LL+Q +L++D++H G + A+ + L+ G Sbjct: 294 AGMSYLGQWEKRCVELLEQ-TYAKKLLLYVDDVHAWGRIGESKQNDRCLADFFRGPLARG 352 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT 374 ++ ++G T +++ + A F + + T++++ E + Sbjct: 353 ELTLVGECTPEQYQQLQADAGNFANAFTTVHVEPTDTATTMRMLVHEARALELTCGCSFD 412 Query: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA---------- 424 + R+ EL+ + P KA++++ AR R+ P + V+ Sbjct: 413 PRVYRSIYELSGSLYSGTAYPGKALELVRTLAARHRISPERIDRLLVDEVLMRAPKPKDR 472 Query: 425 ----------DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 ++ +++++ +PE +S + + V GQD+A+E + + I Sbjct: 473 DSGREQVGTGELIALLSQRTGMPELLLSPERPLDAEAVAAAFAAQVMGQDQAVEVVRDLI 532 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVS 531 +AGL +P G FLF GPTG GKTE+ L++ L + L+R DMSEY H + Sbjct: 533 VRIKAGLCDPSRPYGVFLFTGPTGTGKTEMAKALAEYLFGDESRLIRLDMSEYNVPHAAA 592 Query: 532 RLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 RLIG F G+LT A+ P +V+LLDE+EKA P V N+ LQ+ D+G LTD G Sbjct: 593 RLIGDR-----FQPQGVLTSAIRAQPFSVVLLDEVEKAAPSVLNLTLQLFDDGRLTDAAG 647 Query: 592 RKADFRNVVLVMTTNA----GVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 ADFR+ VL+MT+N G G + D + +++ F PE NR+D + Sbjct: 648 EVADFRHAVLIMTSNLGAGGGSSMGFGGDAGARSRAVLLDISKAVREFFPPELFNRIDRV 707 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 + F LS + K + L + L ++ + ++ + ++G++ GAR + Sbjct: 708 VQFHPLSPTAARAIARKELGRLLNRRGLLERNTFVRYTEAVLARVVDQGFNARDGARSLK 767 Query: 706 RVIQDNLKKPLANEL 720 R ++DN+ L + L Sbjct: 768 RWLEDNIGSLLVDAL 782 >UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepID=CLPB_CHLPN Length = 866 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 186/493 (37%), Positives = 274/493 (55%), Gaps = 28/493 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL--EACSVDLVALRQELE 59 + + +L AF A+ +H ++T HLLLALL N + L + + L ++ Sbjct: 4 FSDAVSEALEKAFELAKSSKHTYVTENHLLLALLENTESLFYLVIKDIHGNPGLLNTAVK 63 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + V+ E E D +P+ Q +L+ A ++ G ++G ++L+A +S + Sbjct: 64 DALSREPTVV---EGEVDPKPSPGLQTLLRDAKQEAKTLGDEYISGDHLLLAFWSSNKEP 120 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + +VS D+ N I+ R G++ +S + +E + NL L Sbjct: 121 FNSWKQTTKVSFKDLKNLITKIRR----------GNRMDSPSAESNFQGLEKYCKNLTAL 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGR++E+ R IQVL RR KNNP+L+GE GVGKTAIAEGLA R++QGDVPE Sbjct: 171 AREGKLDPVIGRDEEIRRTIQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRLIQGDVPES 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASG 298 + +Y LD+G+L+AG KYRG+FE+R K++LK +E D I+FIDE+HT++GAGA G Sbjct: 231 LKGKQLYVLDMGALIAGAKYRGEFEERLKSVLKDVESGDGEHIIFIDEVHTLVGAGATDG 290 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DAANL+KP L+ G + IG+TT E+ EKD AL RRFQ I +TEPS+E+ V I+ Sbjct: 291 A-MDAANLLKPALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFIL 349 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GL+ KYE H VR T A+ AAV L+ +YI DR LPDKAID+IDEA + R+ S Sbjct: 350 RGLREKYEIFHGVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPL 409 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 + + ++ S S ++ + I+AL E + R Sbjct: 410 PIDEKERELAALIVKQEAIKREQSPSYQEEADAMQKS-----------IDALREELASLR 458 Query: 479 AGLGHEHKPVGSF 491 G E K + Sbjct: 459 LGWDEEKKLISGL 471 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 188/812 (23%), Positives = 335/812 (41%), Gaps = 92/812 (11%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALR----- 55 + L+ L A A+ E+++ +HLLLA + + V L+ Sbjct: 82 SPGLQTLLRDAKQEAKTLGDEYISGDHLLLAFWSSNKEPFNSWKQTTKVSFKDLKNLITK 141 Query: 56 ----------------QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS- 98 Q LE + + T + + + +R +Q +++ Sbjct: 142 IRRGNRMDSPSAESNFQGLEKYCKNLTALAREGKLDPVIGRDEEIRRTIQVLSRRTKNNP 201 Query: 99 ---GRNEVTGANVLVAI-FSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPG 154 G V + + + L+ ++ LD+ I+ + E + Sbjct: 202 MLIGEPGVGKTAIAEGLALRLIQGDVPESLKGKQLYVLDMGALIAGAKYRGEFEERLKSV 261 Query: 155 SQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER----------------- 197 + ++ T + A G +D + L R Sbjct: 262 LKDVESGDGEHIIFIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGATTLNEYQKY 321 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTA-IAEGLAWRIVQGDVPEVMADCTIYS--LDIGSLL 254 + R+ P+ V E + I GL + E+ I L+ LL Sbjct: 322 IEKDAALERRFQPIFVTEPSLEDAVFILRGL------REKYEIFHGVRITEGALNAAVLL 375 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 YR RF +I IDE ++I + +L P+ Sbjct: 376 ---SYR-YIPDRFL--------PDKAIDLIDEAASLIR--------MQIGSLPLPIDEKE 415 Query: 315 K-----IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI----EETVQIINGLKPKY 365 + I + ++ + E+ A+ + + S+ +E ++I+GLK K Sbjct: 416 RELAALIVKQEAIKREQSPSYQEEADAMQKSIDALREELASLRLGWDEEKKLISGLKEKK 475 Query: 366 EAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVAD 425 + ++++ + + L + + I + A ++ V+ Sbjct: 476 NSLESMKFSEEEAERVADYNRVAELRYSLIPQLEEEIKQDEASLNQRDNRLLQEEVDERL 535 Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VVA IP + + + + + L L + L+ V GQ A+ A++++I+ AR GL Sbjct: 536 IAQVVANWTGIPVQKMLEGEAEKLLILEESLEERVVGQPFAVSAVSDSIRAARVGLNDPQ 595 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+G FLF GPTGVGKTE+ L+ L + ++RFDMSEYME+H++S+LIG+ PGYVG Sbjct: 596 RPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMSEYMEKHSISKLIGSSPGYVG 655 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 +++GG L++A+ + P++V+L DEIEKA +V NILLQV D+G LTD RK + +N + + Sbjct: 656 YEEGGSLSEALRRRPYSVVLFDEIEKADKEVLNILLQVFDDGILTDGKKRKVNCKNALFI 715 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAM----EEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 MT+N G E + + +K+ +PEF NR+D I+ F L+ + I Sbjct: 716 MTSNIGSPELADYCSKKGSELTKEAILSVVSPVLKRYLSPEFMNRIDEILPFVPLTKEDI 775 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 ++V + + +L + ++L +L+E+GYD A GARP+ R+IQ + L+ Sbjct: 776 VKIVGIQMRRIAQRLKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSK 835 Query: 719 ELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 LL G + + + + K L + Sbjct: 836 ALLKGDIKPDTSIELTM--AKEVLVFKKVETP 865 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 42/112 (37%), Gaps = 8/112 (7%) Query: 79 QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFI 138 + + + L++A +SS VT ++L+A+ ES +++ + + + Sbjct: 3 KFSDAVSEALEKAFELAKSSKHTYVTENHLLLALLENTESLFYLVIKDIHGNPGLLNTAV 62 Query: 139 SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIG 190 ++ + +P+ ++ + Q A+ G + + G Sbjct: 63 KDALSREPTVVEGEVDPKPS--------PGLQTLLRDAKQEAKTLGDEYISG 106 >UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA Length = 905 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 173/489 (35%), Positives = 269/489 (55%), Gaps = 17/489 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 Q + +L+ A A + + HLL A+L N AR +EA + + E+ Sbjct: 5 FTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMARALIEAAGGNAQNVSAEVH 64 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ + + VL +A +Q G VT +LVAI + + +Q Sbjct: 65 QAMQSLPS--ASGSTTTQPDVSRQLSAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKPNQ 122 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 +A +L K+ ++ + N ++ D S+D G + +E ++T+L Sbjct: 123 SADILEKNGLTADKLRNALTAARGSDRKVTSAD---------AEGSYKALEKYSTDLTAA 173 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G +DP+IGR++E+ R IQ+L RR KNNP+L+GE GVGKTA+ EGLA RIV GDVP Sbjct: 174 AKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTT 233 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASG 298 + + + SLD+GS++AG+KYRG+FE+R K++L+++++ D I FIDEIHTI+GAGAA Sbjct: 234 LQNKKLISLDLGSMVAGSKYRGEFEERLKSVLEEIKKADGQIITFIDEIHTIVGAGAAE- 292 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA N++KP+L+ G++R+IG+TT E+ EKD AL RRFQ++ + EPS+E+TV I+ Sbjct: 293 GSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAIL 352 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 G+ PKYEAHH V A+ AA L+ +YI+ R LPDKAID++DEA A R+ S + Sbjct: 353 RGIAPKYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPE 412 Query: 419 KTVNVADIESVVARIARIPEKSVSQS--DRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM 476 + + + + L D K + ++ I +E + Sbjct: 413 EIDELRRQVDRLKMEKSYLLGNPKNDKATEKAEAELDDSAKDRLADLNQEIADKSEKLNG 472 Query: 477 ARAGLGHEH 485 +A E Sbjct: 473 LKARWDAEK 481 Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats. Identities = 206/806 (25%), Positives = 344/806 (42%), Gaps = 94/806 (11%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELEA 60 +++L L+ A + E++TV+ +L+A+ + + + LE + LR L A Sbjct: 84 SRQLSAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKPNQSADILEKNGLTADKLRNALTA 143 Query: 61 FIEQTTPVLPASEE----------------------ERDTQPTLSFQRVLQRAVFHVQSS 98 V A E + +RV+Q +++ Sbjct: 144 ARGSDRKVTSADAEGSYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNN 203 Query: 99 ----GRNEVTGANVLVAIFSEQE-SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDP 153 G V V+ + L+ ++ LD+ + ++ + E + Sbjct: 204 PVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKS 263 Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREK-----ELERAIQVLCRRRKN 208 + + ++ T + A G +D + EL + Sbjct: 264 VLEEIKKADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEYRE 323 Query: 209 NP------------LLVGESGVGKT-AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 255 N + VGE V T AI G+A P+ A + D + A Sbjct: 324 NIEKDPALERRFQQVFVGEPSVEDTVAILRGIA--------PKYEAHHKVTIGDDALVAA 375 Query: 256 GT---KYRG--DFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPL 310 T +Y + L+ + E+ + QVD + K Sbjct: 376 ATLSNRYISGRQLPDKAIDLVDEAAAHLRM-----ELDSSPEEIDELRRQVDRLKMEKSY 430 Query: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD 370 L G + +T E E D + R ++ E + + + H+ Sbjct: 431 LL-GNPKNDKATEKAEA----ELDDSAKDRLADLNQEIADKSEKLNGLKARWDAEKNGHN 485 Query: 371 ----VRYTAKAVRAAVELAVK--------YINDRHLP----DKAIDVIDEA---GARARL 411 +R +R E + IN +P + A +EA GA Sbjct: 486 RIGDLRKKLDELRTQAEKYEREGDLAKSSAINYGEIPAIQKEIAQAEKNEAESGGADNAN 545 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 V V+ I +V+ IP + Q + + L ++ + L V GQ +AI+A++ Sbjct: 546 ADVPMVPDRVDADSIAEIVSDWTGIPVGRLMQGENEKLLHMEEYLGKRVIGQKEAIQAVS 605 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERH 528 +A++ +RAG+ ++P GSFLF GPTGVGKTE+ L+ L + ++R DMSEYME+ Sbjct: 606 DAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKA 665 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 +VSRLIGA PGY+G+++GG LT+AV + P++V+L DE+EKA+P+VF++LLQV+D+G LTD Sbjct: 666 SVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTD 725 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNII 648 GR DF+N +L+MT+N G + + M+ + F PEF NRLD ++ Sbjct: 726 GQGRTVDFKNTILIMTSNLGSQFLVNPDM--DADAKKKAVMDAVHMQFKPEFINRLDELV 783 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F L+ + + +VD + ++ +L + ++L+V+ AR WLA GYD A GARP+ R++ Sbjct: 784 MFHPLTREELGGIVDIQVAQVSARLTDRRITLDVTDSAREWLANTGYDPAYGARPLRRLV 843 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVA 734 Q + LA LL G + DG V V Sbjct: 844 QTEVGDQLARMLLAGEVHDGDTVLVD 869 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 33/93 (35%) Query: 79 QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFI 138 + T Q L AV + + G +V ++L A+ ++ S A L+ + +V + Sbjct: 4 KFTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMARALIEAAGGNAQNVSAEV 63 Query: 139 SHGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN 171 + S S + + + E Sbjct: 64 HQAMQSLPSASGSTTTQPDVSRQLSAVLSQAEK 96 >UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. SE45 RepID=D0D9L8_9RHOB Length = 864 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 177/527 (33%), Positives = 276/527 (52%), Gaps = 33/527 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + A A H+ + EHLL AL+ + A + + + LE Sbjct: 6 FTERSRGFIQAAQTIAMRDNHQRLVPEHLLKALMDDEQGLASNLITRAGGQPPRVVEVLE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + V S + + RVL A + +G + V +L A+ E+ Sbjct: 66 QKLSKIPRV---SGDAGQVYLDPATARVLDEAEKIAKKAGDSFVPVERILTALAIEKSG- 121 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A L ++ + I+ + G +S G + ++ + +L + Sbjct: 122 AKEALEAGNLTPQRLNEAINDLRK----------GRTADSASAEEGYDALKKYARDLTEA 171 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G IDP+IGR++E+ R++QVL RR KNNP+L+GE GVGKTAIAEGLA RI+ GDVPE Sbjct: 172 AEQGRIDPIIGRDEEIRRSMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIDGDVPES 231 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASG 298 + + + +LD+G+L+AG KYRG+FE+R K++LK++E ILFIDE+HT++GAG G Sbjct: 232 LRNKRLMALDMGALIAGAKYRGEFEERLKSILKEIESAAGEIILFIDEMHTLVGAGKTDG 291 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA+NL+KP L+ G++ +G+TT E+ EKD ALARRFQ + + EP++E+T+ I+ Sbjct: 292 A-MDASNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVMVQEPTVEDTISIL 350 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 G+K KYE HH VR + A+ AA L+ +YI DR LPDKAID++DEA +R R+ SK + Sbjct: 351 RGIKEKYELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPE 410 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLG------DRLKMLVFGQDKAI----- 467 + + + + + +D L+ L + + Q +A Sbjct: 411 ELDQLDRNILQMQIEVEALKLEDDAASKDRLEKLEKELADLEEKSAEMTAQWQAERDKLA 470 Query: 468 --EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKT-EVTVQLSKA 511 L E + RA L + G+F AG GK E+ +L++A Sbjct: 471 SARDLKEQLDRLRAELEIAKRE-GNFAKAGELQYGKIPEIEKKLAEA 516 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 115/300 (38%), Positives = 174/300 (58%), Gaps = 13/300 (4%) Query: 331 FEKDRALARRFQKID-----ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 385 E D A R +K++ + E S E T Q + K + D++ +RA +E+A Sbjct: 431 LEDDAASKDRLEKLEKELADLEEKSAEMTAQ-WQAERDKLASARDLKEQLDRLRAELEIA 489 Query: 386 VKYINDRH----LPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSV 441 + N K ++ + ++ V I VV R IP + Sbjct: 490 KREGNFAKAGELQYGKIPEIEKKLAEAEAAEGDVMVEEAVRPEQIAEVVERWTGIPTSKM 549 Query: 442 SQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGK 501 + +R+ L + D L V GQ++A++A+ A++ ARAGL E++P+GSFLF GPTGVGK Sbjct: 550 LEGEREKLLRMEDGLHKRVVGQNQAVKAVANAVRRARAGLNDENRPLGSFLFLGPTGVGK 609 Query: 502 TEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPH 558 TE+T +++ L + ++R DMSE+ME+H+V+RLIGAPPGYVG+D+GG+LT+AV + P+ Sbjct: 610 TELTKAVAEFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPY 669 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG 618 V+L DE+EKAHPDVFN+LLQV+D+G LTD GR DF+ ++V+T+ G Sbjct: 670 QVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSTLARSAVAASRGG 729 >UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular organisms RepID=CLPB1_SYNY3 Length = 898 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 183/546 (33%), Positives = 280/546 (51%), Gaps = 40/546 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 ++ ++ + AR +++ + VEH+LLALL A + +VD LRQ+LE Sbjct: 9 FTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDGEGLRQQLE 68 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 F + P S +L RA S ++ ++LV F+E + Sbjct: 69 IFTNRQ----PKQAYVEQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVG-FAEDDRV 123 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 LR + D+ I + Q E ++ + +L + Sbjct: 124 GRKTLRAFNLDPQDLELAIKAIRGSQ----------KVTEPNQEEKYEALDKYGRDLTEQ 173 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGR++E+ R IQVL RR KNNP+L+GE GVGKTAIAEGLA RI+ GDVPE Sbjct: 174 ARQGKLDPVIGRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPES 233 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASG 298 + + + SLD+GSL+AG KYRG+FE+R ++++K++ D ILFIDE+HT++GAG G Sbjct: 234 LKNRQLISLDMGSLIAGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREG 293 Query: 299 -GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DA NL+KP+L+ G++R IG+TT E+ EKD AL RRFQ++ + +PS+++T+ I Sbjct: 294 SGSMDAGNLLKPMLARGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISI 353 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + GLK KYE HH V+ T A+ AA L+ +YI DR LPDKAID++DEA AR ++ SK Sbjct: 354 LRGLKEKYEVHHGVKITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLKMEITSKP 413 Query: 418 KKTVNVADIESVVARIA-------RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKA---- 466 + ++ + + P +S ++ L+ + + L Q + Sbjct: 414 VELEDIDRRLMQLQMEKLSLEGEEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQW 473 Query: 467 ---------IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELL 517 I L E + R + + + A G+ EV + +LL Sbjct: 474 LSEKQMLEEINTLKEKEQELRLQVEKAERAT-DWEKAAKIKYGELEVLQHDIEEKESKLL 532 Query: 518 RFDMSE 523 S Sbjct: 533 EIQGSG 538 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 153/452 (33%), Positives = 239/452 (52%), Gaps = 20/452 (4%) Query: 325 QEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVEL 384 +E D++ R +KI +E Q ++G + + T K + L Sbjct: 436 EEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQWLSEKQMLEEINTLKEKEQELRL 495 Query: 385 AVKYINDRHLPDKA--------------IDVIDEAGARARLMPVSKRKKTVNVADIESVV 430 V+ +KA I+ + + + ++ V +DI +V Sbjct: 496 QVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLLEIQGSGNTLLREQVTESDIAEIV 555 Query: 431 ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGS 490 A IP + +++R L L L V GQ +A+ A++ AI+ ARAG+ +P+GS Sbjct: 556 AGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRARAGMKDPSRPIGS 615 Query: 491 FLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 FLF GPTGVGKTE+ L+ L ++R DMSEYME+H VSRLIGAPPGYVG+++GG Sbjct: 616 FLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGG 675 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 607 L++AV + P++V+LLDE+EKAH DVFNILLQV+D+G +TD+ GR DFRN ++VMT+N Sbjct: 676 QLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGRVVDFRNTIIVMTSNI 735 Query: 608 GVRETERKS-IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFI 666 G S + ++ ++K F PEF NR+D++I F L D + ++V I Sbjct: 736 GSDHILSLSADDADYDKMQKQVLQSLRKHFRPEFLNRIDDLIIFHTLKRDELRRIVVLQI 795 Query: 667 VELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLV 726 ++ LD++ ++L +S A + + GYD GARP+ R IQ L+ P+A ++L + V Sbjct: 796 KRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQRQLENPIATKILENTFV 855 Query: 727 DGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 G ++ + +L + + E Sbjct: 856 AGDKILIDCV--DGQLIFDKEIEPTTLPEEPE 885 >UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=CLPB_RHOBA Length = 881 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 171/485 (35%), Positives = 264/485 (54%), Gaps = 23/485 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE--ALEACSVDLVALRQELE 59 L + + + A A+A + + H+L A ++ LE +VD+ L+ L Sbjct: 8 LTTQAQNVVAEAQAQATSAGNAEIDPLHVLSAAVNQRDGITTPLLEKINVDVPKLKSLLT 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + +E+ LP + + + Q L+ + +S V+ ++LV + +++ Sbjct: 68 SELEK----LPHASGMGQARVSAKLQAALEASATSAESLKDEYVSTEHLLVGLAR-TDNK 122 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A LL VS D++ +S ++ + +E F +L QL Sbjct: 123 AKNLLSLLGVSDNDLLTAMSQIRG----------SARVTDPNAESTYQALEKFGIDLTQL 172 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G +DP+IGR+ E+ R IQVL RR KNNP+L+G+ GVGKTAIAEGLA RI +GDVP+ Sbjct: 173 AQSGKLDPVIGRDNEIRRVIQVLSRRTKNNPVLIGQPGVGKTAIAEGLALRIFEGDVPQS 232 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASG 298 + + SLD+G+L+AG K+RGDFE+R K++L++++ D ILFIDE+H ++GAG A Sbjct: 233 LKGKKVVSLDMGALVAGAKFRGDFEERLKSVLREVKDSDGKVILFIDELHLVVGAGNAE- 291 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G DAANL+KP L+ G +R IG+TT E+ EKD AL RRFQ + + EP++E+TV I+ Sbjct: 292 GSADAANLLKPELARGALRCIGATTLDEYRQHIEKDAALERRFQPVFVGEPNVEDTVAIL 351 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLKP+YE+HH VR T A+ AA L+ +YI DR LPDKAID+IDEA +R + S + Sbjct: 352 RGLKPRYESHHGVRITDSALVAAANLSDRYIADRFLPDKAIDLIDEAASRLAMEKESVPE 411 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 + + + R S D + + ++ + +L E + + Sbjct: 412 PIDRLQRRLRQLELVHRQLVDEQEASAVDKRVEVEEEMESA----KAELASLKEQWETEK 467 Query: 479 AGLGH 483 GL Sbjct: 468 MGLDD 472 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 211/814 (25%), Positives = 358/814 (43%), Gaps = 91/814 (11%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSVDLVALR------ 55 + +L+ +L + A + E+++ EHLL+ L + A+ L V L Sbjct: 85 SAKLQAALEASATSAESLKDEYVSTEHLLVGLARTDNKAKNLLSLLGVSDNDLLTAMSQI 144 Query: 56 ---------------QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS-- 98 Q LE F T + + + + +RV+Q +++ Sbjct: 145 RGSARVTDPNAESTYQALEKFGIDLTQLAQSGKLDPVIGRDNEIRRVIQVLSRRTKNNPV 204 Query: 99 --GRNEVTGANVLVAI-FSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGS 155 G+ V + + E L+ +V LD+ ++ + + + Sbjct: 205 LIGQPGVGKTAIAEGLALRIFEGDVPQSLKGKKVVSLDMGALVAGAKFRGDFEERLKSVL 264 Query: 156 QPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER-----------------A 198 + + ++ + G D + EL R Sbjct: 265 REVKDSDGKVILFIDELHLVVGAGNAEGSADAANLLKPELARGALRCIGATTLDEYRQHI 324 Query: 199 IQVLCRRRKNNPLLVGESGVGKT-AIAEGLAWRIVQGDVPEVMADCTIYSLDIGS----- 252 + R+ P+ VGE V T AI GL R + + + ++ Sbjct: 325 EKDAALERRFQPVFVGEPNVEDTVAILRGLKPRYESHHGVRITDSALVAAANLSDRYIAD 384 Query: 253 ---------LLAGTKYRGDFEK--------RFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 L+ R EK R + L+QLE ++ E + Sbjct: 385 RFLPDKAIDLIDEAASRLAMEKESVPEPIDRLQRRLRQLELVHRQLVDEQEASAVDKRVE 444 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 A + L + +G + ++ ++ L RF + + Sbjct: 445 VEEEMESAKAELASLKEQWETEKMG---LDDVQSVRQEVDQLQHRF-----AQLDADAKE 496 Query: 356 QIINGLKP--KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 + + G P Y V+ + ++A ++ A +K D D+ Sbjct: 497 KQLRGESPEDAYSEMLQVQSRLRELQARIDEA----------EKHDDSADQTKEEPGDEK 546 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 +K V +I VV+ +P + +++R L + +RL V GQD+A+ A+++A Sbjct: 547 RRLLRKEVTEEEIAEVVSTWTGVPVTRMMETERAKLLVMEERLHQRVVGQDEAVTAVSDA 606 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTV 530 ++ +R+GL ++P+GSFLF GPTGVGKTE+ L++ + + ++R DMSE+MERH+V Sbjct: 607 VRRSRSGLQDPNRPIGSFLFLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEFMERHSV 666 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 SRLIGAPPGYVG+++GG LT+AV + P+AV+LLDE+EKAHPDVFN+LLQV+D+G LTD Sbjct: 667 SRLIGAPPGYVGYEEGGKLTEAVRRRPYAVILLDEMEKAHPDVFNVLLQVLDDGRLTDGQ 726 Query: 591 GRKADFRNVVLVMTTNAGVRETERKS-IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIW 649 GR +F N V+VMT+N G + +R + G + + +K F PEF NR+D+ + Sbjct: 727 GRTVNFTNTVVVMTSNVGSQVIQRVTEEGGGEDEMRQAVEDALKARFLPEFLNRIDDTVI 786 Query: 650 FDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 F L I ++V + EL+ +L G+S E++ A + +AE GYD A GARP+ RVIQ Sbjct: 787 FHPLQQTQIRRIVQLQLEELRSRLAANGLSFEITDAAIDQIAEVGYDPAYGARPLKRVIQ 846 Query: 710 DNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 ++ PLA+ +L S +G + + D ++ + Sbjct: 847 REVQNPLASAILKNSYAEGTTIKIDHDGDQFVFS 880 >UniRef50_B0SCX5 Endopeptidase Clp, ATP-dependent proteolytic subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCX5_LEPBA Length = 795 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 203/824 (24%), Positives = 376/824 (45%), Gaps = 128/824 (15%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 + ++ +L++A A ++ +T HL+ ++ P++ L+ + ++ ++ Sbjct: 5 DSNVQGALDIAQTEAIRRQNTEITPYHLVWGFMTLPTSV-----SGKSLIRYKSTVDEYL 59 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 ++ + + + A +GR E+ A+ L + Sbjct: 60 KKQ-ARASGEIPFDSLRTSPKLAQWFTMASSRAAENGREELKEADFLKFL--------PQ 110 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 +L + +++ D+ +E + NF NLN LAR Sbjct: 111 ILPELKINYEDL--------------------------NVKETDEEVPNFLVNLNDLARE 144 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 G +DP+IGR KE+ +++L RR KNNP+LVG +GVGKTAI EGLA +IV+G VP+V+ Sbjct: 145 GKLDPVIGRSKEIRSVMEILGRRSKNNPVLVGSAGVGKTAIVEGLAEQIVKGRVPDVLKG 204 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASGGQV 301 TI+SLD+G L+AGTKYRG+FE++ ALL+ ++ Q +ILFIDEIH ++GAG G + Sbjct: 205 KTIFSLDMGQLMAGTKYRGEFEEKLTALLRYIKGQAGEAILFIDEIHQLVGAGKTDGA-M 263 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 DAANL+KP L+ G++ IG+TT EF D+AL RRF+ + + EPS E+ ++I+ G+ Sbjct: 264 DAANLLKPALARGELHCIGATTGDEFQKYILGDQALERRFRAVPVNEPSKEDAIEILMGI 323 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTV 421 + K+E HH ++ + +A+ A+V L+ +YI D+ LPDKAID++DEA + +L + + V Sbjct: 324 RDKHEIHHGIKISDEAIYASVLLSDQYITDKFLPDKAIDLVDEAASALKLSAEAMPTELV 383 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM-LVFGQDKA-----IEALTEAIK 475 + + ++ + ++ ++ L + + + + I ++ I Sbjct: 384 ELEG--EIRSKKIFAQVEKKNEEILKEIEVLEKKFQAGKEIWEKEVNSLKQIASIKNKID 441 Query: 476 MARAGL---------GHEHKPVGSFL---------FAGPTGVGKTEVTVQLSKALGIELL 517 + L + + L F + + + +++ GI + Sbjct: 442 RVKFDLDAAQQRADYTEASRLKYAVLPELEKELSTFQNSWILERNHIAAVIARQTGIPVE 501 Query: 518 RF--------------------------------DMSEYMERHTVSRLIGA-----PPGY 540 + ++ Y + +R +G+ P G Sbjct: 502 KILKTKQENLLHLEDDLNSVVYGQKESIREIADTLLTSYAGISSETRPLGSFLLKGPTGV 561 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM-------DNGTLTDNNGRK 593 + + + ++ LD E + L+ + G LT+ RK Sbjct: 562 GKTETAKAIAKFLFDQESNLVRLDLSEYSEKHSVAKLIGAPAGYIGYDEGGILTEAIRRK 621 Query: 594 --------------ADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM-EEIKKIFTP 638 DF +++L + + + + + ++I + + I+ F P Sbjct: 622 PYSVVLFDEVEKAHPDFSDILLQILDDGRLTDNKGRTINFKNTIVILTTNSKNIEVDFKP 681 Query: 639 EFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRA 698 E RLD I+ + L + ++ ++++K + L +L KGV +E+S+ + L E+G+D Sbjct: 682 EVLGRLDAILTYHSLDSSIMEKLIEKQLRSLNDRLKVKGVVIELSESTEHILREQGFDPK 741 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 GARP+ V + +PLA +L G++V+G + D E + Sbjct: 742 FGARPLGSVFNRIVNRPLAKAILSGTMVEG-KYRADWDGENLQF 784 >UniRef50_UPI0001744445 ClpA/B family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744445 Length = 1074 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 167/606 (27%), Positives = 286/606 (47%), Gaps = 26/606 (4%) Query: 158 NSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNP--LLVGE 215 EE G++ + +L++ + + RE EL R+ + P +LVG Sbjct: 190 GQEEPMDGQKELYRVGRSLDRQYPQ-ELQRALLRETELTELAGWFSRKTPHVPMVVLVGP 248 Query: 216 SGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE 275 VGKTA+ RI++ P+V + + +++G Y G +E+R+ +L +L Sbjct: 249 PKVGKTALIRECVRRIIE--SPKVSRRGQFWHVSPQRVISGMSYLGQWEERWTVVLAELR 306 Query: 276 QDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDR 335 + +L +D++ + AG +SG ++ +++K + ++ T + ++ + E DR Sbjct: 307 KR-RHVLVLDDLPGLFEAGKSSGSELTLGHVLKARQEHEPVAILAEATPEVWARLREMDR 365 Query: 336 ALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLP 395 A A F + + E E T++I+ R+T V ++L ++ R P Sbjct: 366 AFASMFHVMHVRETDDETTLRILVRTLQAMPLGARTRFTLDVVPMVMQLQQRFARARAFP 425 Query: 396 DKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 KA++++ + S V+ + A I +K + + L Sbjct: 426 GKAVEMVQALAQGLK----SAGGTVVDGPAVLEWFASRHGIRKKMLDAGESLPRARLRGA 481 Query: 456 LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI- 514 + GQ+ AI A+ + + MA+A L H+P+G+ LF GPTG GKTE L++ + Sbjct: 482 FSQRIVGQEPAIAAMVDTVLMAKAELQDAHRPMGTLLFLGPTGTGKTECARALAQFVFGS 541 Query: 515 --ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 ++LRFD++EY RLIG G +GGLLT V + P ++LL DE+EKAHPD Sbjct: 542 EEKMLRFDLNEYSGADAALRLIG------GAGRGGLLTSRVRRQPFSLLLFDEVEKAHPD 595 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS---TDAM 629 V ++LLQV+ G LTD G+ ADF N ++++T+N G R S+G + + Sbjct: 596 VLDLLLQVLGEGRLTDAQGQTADFCNCIIILTSNLGAGAGSR-SVGFAATEEIPGGEHYI 654 Query: 630 EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEAR 687 E +K F PEF NRLD I+ F L I + + L + V + + + Sbjct: 655 EAARKHFRPEFFNRLDRIVPFHELRKGDIVYLARTMAERALNRQGLQDRHVDVRLEDDVV 714 Query: 688 NWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 LA++G+D A GAR + R ++ L +PLA +LL + V +D E L + Sbjct: 715 KALADRGFDLAFGARALRRAVETYLVEPLAEKLLGMPWDRAARFQVTVDPEG-RLQFHLH 773 Query: 748 SAQKHK 753 + ++ Sbjct: 774 TVKQVD 779 >UniRef50_UPI00016C3DF8 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DF8 Length = 791 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 161/663 (24%), Positives = 258/663 (38%), Gaps = 70/663 (10%) Query: 127 HEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGID 186 ++ +V ++ + P P + + A G Sbjct: 137 EGLTPEEVGAYLPPVEAELLELVVPVPKEPPGGPLTVPPPPTLAKVAEPVGDRAVRKGYA 196 Query: 187 PLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA---------EGLA--WRIVQGD 235 GRE +L ++ L K N LL+GE+GVGKT + + LA R D Sbjct: 197 RAWGREADLAALVRKL-HHEKANVLLLGEAGVGKTTLMVDAVREAEKKALADTNRSRDAD 255 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 P + G ++AG +Y G +E+R ++L+ +L + N +L + + ++ G Sbjct: 256 EPRPQKRK-FWLTSAGRIVAGMRYLGQWEERVESLIAEL-GEINGVLCAERLLELVRTGG 313 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 A + P L+ G++R+I T E L FQ + + + Sbjct: 314 LGPTD-SIAAFLVPYLARGELRMIAEVTPAELDACHRLMPGLPDLFQIVRVEPFDRATAL 372 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 +I+ + V V L +++ P A + V Sbjct: 373 SVIDRQLDASASGPGVEVERGTGERIVRLFRRFMPYAAFPGPASGFARQLV----DEHVR 428 Query: 416 KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIK 475 KK V + R +PE + ++ + V Q +A EA T + Sbjct: 429 DGKKPVTPTAVVDRFRRQTGLPELFLRDEITLQRDDVRSWFRARVIDQPEACEAATNVVM 488 Query: 476 MARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE-------------------- 515 +AGL ++P LF GPTGVGKT + L+ Sbjct: 489 TVKAGLNDPNRPPAVMLFCGPTGVGKTHMAQALADYFFGHGGSNSERGIRNAELQQENQR 548 Query: 516 ---------------------LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 L+R DMSEY V RL+G P G + G L V Sbjct: 549 SSGTASPHSESRIPHSARDRRLIRLDMSEYGGFDAVYRLLGPPRG-----EPGELVKRVR 603 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 + P +VLLLDEIEKA DVF+ L+ V D G LTD GR +FR+ +++MT+N G + Sbjct: 604 QQPFSVLLLDEIEKAAADVFDTLMGVFDEGRLTDQYGRVTNFRSTIIIMTSNLGAG--QS 661 Query: 615 KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-- 672 +++G D+ + K F PEF NR+D ++ F L + + + + + + Sbjct: 662 RAVGFGA-DSGVRYQDAAMKFFRPEFFNRMDAVVTFRSLLPASVRAITRRELESIAAREG 720 Query: 673 LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVT 732 L + G ++ S+ LAE G+D GARP+ R I+ + PLA LL + DG + Sbjct: 721 LVRSGAAVRWSERLVERLAEVGFDPRYGARPLQRAIEREVVAPLARWLLANPITDGKVIA 780 Query: 733 VAL 735 Sbjct: 781 ADW 783 >UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subunit n=3 Tax=Actinobacteria (class) RepID=D2NR34_9MICC Length = 959 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 173/581 (29%), Positives = 281/581 (48%), Gaps = 45/581 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 + + ++ A A+ + + H+L AL+ A L+A +D+ A+ + Sbjct: 95 FTTKSQEVISAANTNAQTAGNPTIETAHILKALMDQREGVAVAVLKAAGLDVDAISEAAS 154 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 A I++ + ++ + + LQ A Q G V+ +L+ I S +S Sbjct: 155 AEIKKLPK--ASGASVQNASLSRAALSALQAAQTRAQGFGDTYVSTEMILLGIASGTDST 212 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A + K + + I + ++ + G + +E + T+L + Sbjct: 213 ATA-MHKLGATAELIAQTIPNVRGDR----------TVDTPDPEGTFQALEKYGTDLTAI 261 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGR+ E+ R +QVL RR KNNP+L+GE GVGKTA+ EGLA R+V GDVPE Sbjct: 262 ARAGKLDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVSGDVPES 321 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL-FIDEIHTIIGAGAASG 298 + T+ SLD+GS++AG KYRG+FE+R KA+L+++++ I+ FIDEIHT++GAGA+ Sbjct: 322 LRGKTLISLDLGSMVAGAKYRGEFEERLKAVLEEIKKSEGQIVTFIDEIHTVVGAGASE- 380 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA N++KP+L+ G++R+IG+TT E+ EKD AL RRFQ++ + EPS+++T+ I+ Sbjct: 381 GSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVYVGEPSVDDTIGIL 440 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK +YEAHH V+ A+ AA L+ +YI R LPDKAID+IDEA +R R+ S + Sbjct: 441 RGLKERYEAHHKVQIADSALVAAATLSNRYIPSRQLPDKAIDLIDEAASRLRMEIDSAPE 500 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD-------------- 464 + + + + + L+ L + D Sbjct: 501 EIDQLRRAVDRLTMEELALADETDPASVERLEALRKDMADKKEQLDALNARWEAEKASLN 560 Query: 465 ---KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDM 521 + E A + S L G + E+ + + Sbjct: 561 RVGDIKTQIDELRSRAEVAQREGNLAEASRLLYGEIPAKQAELEEAQRAEDTAK----NE 616 Query: 522 SEYMER-------HTVSRLIGAPPGYVGFDQGGLLTDAVIK 555 S E +S G P G + + L + + Sbjct: 617 SMVSEEVTADDIAEVISSWTGIPAGRMMQGESEKLLEMEKR 657 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 205/799 (25%), Positives = 350/799 (43%), Gaps = 88/799 (11%) Query: 17 AREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQ------------------- 56 A+ +++ E +LL + S + A+ + Q Sbjct: 188 AQGFGDTYVSTEMILLGIASGTDSTATAMHKLGATAELIAQTIPNVRGDRTVDTPDPEGT 247 Query: 57 --ELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS----GRNEVTGANVLV 110 LE + T + A + + +RV+Q +++ G V V+ Sbjct: 248 FQALEKYGTDLTAIARAGKLDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVE 307 Query: 111 AIFSEQESQ-AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERM 169 + S LR + LD+ + ++ + E + + + + + Sbjct: 308 GLAQRMVSGDVPESLRGKTLISLDLGSMVAGAKYRGEFEERLKAVLEEIKKSEGQIVTFI 367 Query: 170 ENFTTNLNQLARVGGIDPLIGREK-----ELERAIQVLCRRRKNNP------------LL 212 + T + A G +D + EL + N + Sbjct: 368 DEIHTVVGAGASEGSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVY 427 Query: 213 VGESGVGKTA-IAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALL 271 VGE V T I GL R + +L+A + Sbjct: 428 VGEPSVDDTIGILRGLKERYEAHHK---------VQIADSALVAAAT-------LSNRYI 471 Query: 272 KQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIF 331 + +I IDE + + + ++ + T +E + Sbjct: 472 PSRQLPDKAIDLIDEAAS--RLRMEIDSAPEEIDQLRRAVDR--------LTMEELALAD 521 Query: 332 EKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD----VRYTAKAVRAAVELAVK 387 E D A R + + +E + +N +A + ++ +R+ E+A + Sbjct: 522 ETDPASVERLEALRKDMADKKEQLDALNARWEAEKASLNRVGDIKTQIDELRSRAEVAQR 581 Query: 388 --------YINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEK 439 + +P K ++ + A S + V DI V++ IP Sbjct: 582 EGNLAEASRLLYGEIPAKQAELEEAQRAEDTAKNESMVSEEVTADDIAEVISSWTGIPAG 641 Query: 440 SVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGV 499 + Q + + L + R+ + GQ+ A+ A+++A++ ARAG+ ++P+GSFLF GPTGV Sbjct: 642 RMMQGESEKLLEMEKRIGARLIGQEAAVVAVSDAVRRARAGISDPNRPIGSFLFLGPTGV 701 Query: 500 GKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKH 556 GKTE+ L++ + L+R DMSEY E+HTVSRL+GAPPGYVG ++GG LT+AV + Sbjct: 702 GKTELAKALAEFQFDDERALVRIDMSEYSEKHTVSRLVGAPPGYVGHEEGGQLTEAVRRR 761 Query: 557 PHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKS 616 P++V+LLDE+EKAHP+VF+ILLQV+D+G LTD GR DFRNV+L++T+N G + + Sbjct: 762 PYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILILTSNLGSQYLVNQD 821 Query: 617 IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK 676 + ++ S A+E + + F PEF NRLD+II F LS + + Q+V I + +L+ + Sbjct: 822 LPF--EERSEKALEVVHQAFRPEFLNRLDDIIMFQPLSAENLGQIVGLQIKSMAKRLEDR 879 Query: 677 GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 ++L V++ A WL + GYD A GARP+ R++Q + LA +L G++ DG VTV ++ Sbjct: 880 RLTLNVTEAALEWLGKTGYDPAFGARPLRRLVQREIGDRLARGILSGAIHDGDTVTVDVN 939 Query: 737 KEKNELTYGFQSAQKHKAE 755 + S ++ KAE Sbjct: 940 PDVASDGLSVTSEREQKAE 958 Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 33/81 (40%) Query: 77 DTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVN 136 D + T Q V+ A + Q++G + A++L A+ ++E A +L+ + + Sbjct: 92 DNKFTTKSQEVISAANTNAQTAGNPTIETAHILKALMDQREGVAVAVLKAAGLDVDAISE 151 Query: 137 FISHGTRKDEPTQSSDPGSQP 157 S +K + + Sbjct: 152 AASAEIKKLPKASGASVQNAS 172 >UniRef50_Q9MTD7 Clp n=136 Tax=Apicomplexa RepID=Q9MTD7_TOXGO Length = 765 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 181/772 (23%), Positives = 351/772 (45%), Gaps = 61/772 (7%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 +E+ + L + A ++ +T H++ +L+ + + + + L + L+ +I Sbjct: 15 TKEVLIILIYSKILASLFKNNSITFFHIICSLILQSNLFKLI----IGKKNLLKFLQLYI 70 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 + + + + + + ++ + + + + Y Sbjct: 71 KNNFKQTQL---NYNILFSYTLFKFFN-------NLNKSFINTWKLTINLLQYNSILFKY 120 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 +L + + N I+ +P + + N+ +N Sbjct: 121 ILIYLFKVKSNTYNLINSII--------FKFNDKPINNLYFNNLIKPFNYKSNF------ 166 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 +I R+ + ++L R+ NP+L+G+ G+GK +I + ++ I + + Sbjct: 167 ---YNIINRKSDCVYLYEILNRKIIRNPILLGDFGIGKNSIIKKFSFFIEKFKLKFNNIT 223 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS----G 298 ++ L+I +LL KY K K L+++ N IL +I + Sbjct: 224 KNLWILNIVTLL---KYIKTNNLYIKKFFKFLQENKNIILICPKIEILFNTYYTDSNIYQ 280 Query: 299 GQVDAANLIKP--LLSSGKIRVIG-STTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 + L K + K+++IG S + F ++ L F+KI + E S +E Sbjct: 281 NLESYSFLFKFFNYIKQNKLQLIGLSNNITDIEKKFNINQELNFLFEKIYVKELSNKEIF 340 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA---RLM 412 +I+ +E +++ + K ++ + + YI K+I ++D ++ + Sbjct: 341 KILLKKSSLFEKYYNCSISFKIIKHILYYSQTYIKQHKTLLKSIWLLDNTCSKIYVNQKF 400 Query: 413 PVSKRKKTVNVADIESVVARIARIPEKSVSQS---DRDTLKNLGDRLKMLVFGQDKAIEA 469 + K + ++DI+ + ++ + + + L L+ +FGQ AI Sbjct: 401 HLLKNNNKLALSDIQKTLTKLINLSTNLLFNKANKTNFDIIALRKNLQKSLFGQPTAISK 460 Query: 470 LTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYME 526 + ++K GL +KP+GS+L GP+G GKTE+ L+K L +L+RFDMSE+ME Sbjct: 461 ILISLKRVFTGLKQINKPIGSWLLCGPSGTGKTELAKLLAKFLFGSEADLIRFDMSEFME 520 Query: 527 RHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTL 586 +H++S+LIGAPPGYVG+ + GLLT+A+ K P VLL DEIEKAH D+ N++LQ++D+G L Sbjct: 521 KHSLSKLIGAPPGYVGYGKSGLLTEAIAKKPFTVLLFDEIEKAHKDINNLMLQLLDDGKL 580 Query: 587 TDNNGRKADFRNVVLVMTTNAGVRETE---------RKSIGLIHQDNSTDAMEEIKKIFT 637 TD+ G+ DF N ++ T+N G K ++ S I+ F Sbjct: 581 TDSLGKCVDFSNTLIFFTSNLGFPTNSYELQFLKSGTKLSKKNYKILSNKVESAIQSYFK 640 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKG--VSLEVSQEARNWLAEKGY 695 PEF NRLD+II F L+ + +++KF+ + ++L + L++ + LA+ Y Sbjct: 641 PEFLNRLDDIIIFKPLNINFFKYIINKFLKNIYLKLYNNQIPIFLDIDSNIKTLLAKLAY 700 Query: 696 DRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 GARP+ R+++ ++KP+++ L+ S ++ L+K+ + Y F+ Sbjct: 701 HPLYGARPLKRLLELIIEKPISDLLINFSFNRIIIFSIFLNKKTFNINYSFK 752 >UniRef50_A1ZTB7 Chaperone ClpB, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZTB7_9SPHI Length = 748 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 177/735 (24%), Positives = 309/735 (42%), Gaps = 59/735 (8%) Query: 50 DLVALRQELEAFIEQTTP--------------------VLPASEEERDTQPTLSFQRVLQ 89 D+ +L+ +IE+ + P +E P V Sbjct: 33 DVKSLKASFSEYIEKQMKDSWFYEPEIGSTRIKTISMDIRPHYQESDRIYPVKETLEVKI 92 Query: 90 RAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHE------VSRLDVVNFISHGTR 143 AV+ SG E + + E L+ ++ D+ N + T Sbjct: 93 DAVYGSNESGYYECFLPLLHKNFYFYNEKDLDRLVEHFSRDTFHALTPDDIYNLLIPATP 152 Query: 144 --KDEPTQSSDPGSQPNSEEQAGGEERMENFTTNL---NQLARVGGIDPLIGREKELERA 198 + + + + + + L + R G D R + ++ Sbjct: 153 WLEQVKVKIPKRKKEKSQSGDYKQFKLLNGIAEKLPYSRKENRKGTPDAAWERGETIDHL 212 Query: 199 IQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI-VQGDVPEVMADCTIYSLDIGSLLAGT 257 I ++ K N LLVG+SGVGK+A+ ++ Q + + + + + Sbjct: 213 INIMIA-EKTNVLLVGKSGVGKSAVIHEAIRKVTSQQKSKDFFERNSFWRTTPSRITSKA 271 Query: 258 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 KY G+++ + ++ QLE IL+++ + G G + A + + GK+R Sbjct: 272 KYLGEWQLICEDMVYQLEG-ARGILWLESFVMLALTGG-EGPEDSVAAFLTSFIRRGKLR 329 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 ++ T +E + F+ + + E + T+++ + V +T KA Sbjct: 330 MVSEVTPEELEVMRRMIPGFIEHFRILKVDEMDTQTTLKLFEYFNQYINKRYSVAFTPKA 389 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 A L ++I P KAI + +A + ++ T+++ I R + IP Sbjct: 390 QEMAYVLLDRFIKYESFPGKAIRFLMTCANKA----MQDKELTIDLPQIIDNFTRQSGIP 445 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 + + L D K + GQD ++ +++ IK+ +AG+ +KPV + +FAGPT Sbjct: 446 DFLLRDDLFLNEVELKDFFKEKIKGQDHVVDKVSDIIKVFKAGINDPNKPVATMIFAGPT 505 Query: 498 GVGKTEVTVQLSKALGIE------LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD 551 GVGKT +S + L+R DMSE+ + RLIG+ G L Sbjct: 506 GVGKTATVKAISSYFFGKGQAYEPLIRLDMSEFQHPSQIYRLIGS---------QGKLIQ 556 Query: 552 AVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE 611 V + P +VLLLDEIEKA+P +F+ LL V+D G L D GR DFRN +++MT+N G Sbjct: 557 HVRQKPFSVLLLDEIEKANPLIFDALLTVLDEGILLDAAGRLTDFRNTIIIMTSNLGAT- 615 Query: 612 TERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQV 671 R S+G D ++ F PEF NR+D I+ F+ L + I + K + E+Q Sbjct: 616 -TRSSLGFRSYQGH-DFESNVRAFFRPEFYNRVDAILVFNPLEKETILSITRKELDEIQK 673 Query: 672 Q--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGG 729 + L Q+ + L+ ++ + E+G+D GARP+ R I+ + PL + + Sbjct: 674 RDGLKQRNIKLQFTKNLIEHIGEEGFDPKYGARPLQREIERLIIAPLGHLFIQNPAFVNR 733 Query: 730 QVTVALDKEKNELTY 744 +TV D ++ L Y Sbjct: 734 TITVDYDGKEVSLRY 748 >UniRef50_Q7YN63 Clp protease ATP-binding subunit n=5 Tax=Apicomplexa RepID=Q7YN63_EIMTE Length = 741 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 206/771 (26%), Positives = 362/771 (46%), Gaps = 65/771 (8%) Query: 3 NQELELSLNMAFARAREHRHEF----MTVEHLLLALLSNPSAREALEACSVDLVALRQEL 58 +E+ L A A + + HL L+L+ N + + +++ L Q++ Sbjct: 14 TKEVIYCLEEAKKIAILTNSKSELIIIKPIHLCLSLIFNSKLIQKI--LNINYSILNQKI 71 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 I + S + + L + T +L+ Sbjct: 72 IXNIIFNYNFIDISNLNKKLDKVYYLDKNLLLIFNILNILEYPFNT---LLL-------- 120 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 Y L K + + ++I + N E +++F LN+ Sbjct: 121 --FYYLCKQNI---KLYSYIFSILNINNINFILIKNYINNFLPNINIPEVLKDFLNILNK 175 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 + LIGR+KE++ I++L R+ N +L+G G+GK +I E L + I Sbjct: 176 R------NNLIGRDKEIKNIIEILXRKLNRNIILLGNIGIGKLSIVEKLVYLIP------ 223 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + L+I +L++ + K L L++ N IL+ + H + + Sbjct: 224 ---NKIFLELNITNLISQSNNI----NIIKNLFNFLKKYNNIILYCKDFHLLFNNSNTTT 276 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 N+I LL KI++I +++ + I + + L F KI+I E + I+ Sbjct: 277 DLTYIKNIIYELLFLNKIQIIATSSENYYDKILKNEEKLKFLFAKINILELNKNILFLIM 336 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 ++ + ++L+ KYI D P I + + K K Sbjct: 337 K---QYLIKNNINWINDNILEIIIDLSKKYIKDYAFP-----KIGFLILDSIINKYIKIK 388 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD--RLKMLVFGQDKAIEALTEAIKM 476 K ++ DI +++++ ++ P + + +T+ +LK V+GQD AI ++ ++K Sbjct: 389 KNISKKDIIAIISQYSKFPNTLLLKETNNTIIINNIDLKLKKYVYGQDIAITKISSSLKR 448 Query: 477 ARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRL 533 A GL ++KP+GS+L GP+G GKTE+ L+ L EL+RFDMSE+ME+H++S+L Sbjct: 449 AYTGLKEQNKPIGSWLLCGPSGTGKTELVKSLAYLLFGSEKELIRFDMSEFMEKHSISKL 508 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 IG+PPGYVG ++GGLLT+AV K P++V+L DEIEKAH D+ NI+LQ++D GTLTD+ G Sbjct: 509 IGSPPGYVGCEEGGLLTEAVKKKPYSVILFDEIEKAHKDINNIMLQLLDEGTLTDSKGEH 568 Query: 594 ADFRNVVLVMTTNAGVRETERKSIGLIHQDN---------STDAMEEIKKIFTPEFRNRL 644 DF N +++ T+N G + + + + S + +KK F PEF NRL Sbjct: 569 IDFTNTLIIYTSNLGCPTSSVQFKSFQNGEELSEKEYKFLSKNVDIAVKKFFKPEFLNRL 628 Query: 645 DNIIWFDHLSTDVIHQVVDKFI--VELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 D+II F LS + +++KFI + +Q + + +E+ ++ + LA+ Y+ GAR Sbjct: 629 DSIIVFKPLSILCLINIINKFIFNLNKNLQNNNILLQVELEEDIKILLAKLAYNPLYGAR 688 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHK 753 P+ R+IQ ++KP++ ++ + ++ +KEKN ++Y Q K Sbjct: 689 PLKRIIQQFIEKPISEIIINFNFKLPHLFSIFNNKEKNIISYLIQKINNIK 739 >UniRef50_UPI0001744446 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744446 Length = 1104 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 183/684 (26%), Positives = 300/684 (43%), Gaps = 45/684 (6%) Query: 87 VLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDE 146 L AV E+ +VL+AI E ++ L + E L++ + Sbjct: 120 ALNIAVIAPDRERLPEMLADHVLLAIKREGFNRDLLELARLERGTLELTRL------QWT 173 Query: 147 PTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDP-LIGREKELERAIQVLCRR 205 P + ++ G E+ + T + G P + + ++ + ++L Sbjct: 174 PNLGTAKERWKQRNQEPGKEDALAQLCTRM-----EGIFQPRVFEVQGQVAQLARLLNLE 228 Query: 206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK 265 K + LLVG SGVGKTA+ + LA + C + L+AG G ++ Sbjct: 229 NKPSILLVGPSGVGKTALVQKLA----ADRGEHGLGQCEFHRTSGARLIAGACGFGQWQL 284 Query: 266 RFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQ 325 R + LL + + ++L + + ++ G +S G A+ I+P L +++VI T + Sbjct: 285 RCRELLLRARELG-AVLHLGSLFELLNVGQSSAGNESIASFIRPYLVRREVQVIAECTPE 343 Query: 326 EFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 385 + S + D L F+ + + EP+ E I+ A R+T A+ L Sbjct: 344 QLSVVERIDPRLGDAFRIMKVEEPTPERADAILLA-ASVAMAGDRARFTRPALHRVAALH 402 Query: 386 VKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSD 445 +++ P + + RL S V A++ + +P + + + Sbjct: 403 RRFMGYAAFPGAPLRFMR------RLHEKSATDILVEEAEVYDAFTKETGMPRRLLDPAL 456 Query: 446 RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVT 505 L + V GQ A+ A+ I +AGL +P+ S LF GPTG GKTE+ Sbjct: 457 PLDLDAARQWFEERVQGQPDAVAAVVAMIARLKAGLTRPGRPLMSLLFTGPTGTGKTEMA 516 Query: 506 VQLSKALG---IELLRFDMSEYMERHTVSRLI-GAPPGYVGFDQGGLLTDAVIKHPHAVL 561 L++ L ++R DMSEY + RL+ G+ G + GLLT AV P VL Sbjct: 517 KALAEFLFQAADRMIRLDMSEYNHPWSAQRLVSGSQDG-----REGLLTAAVRDQPFNVL 571 Query: 562 LLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH 621 LLDE EKA P VF++LLQV+ LTD GR ADF N V++MT+N G RE R +G Sbjct: 572 LLDEFEKADPAVFDLLLQVLGEARLTDAAGRTADFSNCVVIMTSNLGAREFARGRLGFQQ 631 Query: 622 QDNS-----TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LD 674 + ++ + PE NR+D+I+ + LS +V+ + + + + + L Sbjct: 632 DGETWRNAVEHFTAAVQAVLRPEMFNRIDSIVPYRPLSEEVVESLTRRELAAIAQRPGLA 691 Query: 675 QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 + + LEV++ LA +GYD GARP+ R I L PL+ EL +L V Sbjct: 692 GRKLRLEVAEPLIQHLAREGYDPRYGARPLKRRIAQELLAPLSAELPV-TLAPKSLVKAE 750 Query: 735 LDKEKNELTYGFQSAQKHKAEAAH 758 L + ++ + F K +A H Sbjct: 751 LGADG-KVKFQFT---KPLQQAEH 770 >UniRef50_Q1D2Y7 ClpA/B family protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D2Y7_MYXXD Length = 836 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 170/685 (24%), Positives = 286/685 (41%), Gaps = 34/685 (4%) Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 PA + R P + + L A + V L ++ Sbjct: 170 RTARKGAPARQSLRVWVPRVDVKGTLHDAADL-EPFVEEMVRHELYLASLDRLHSLAY-- 226 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 V V +D P + ++P + + + LN+ AR Sbjct: 227 ------VGEEQVETLSVPVRFRDTPRARALDAAKPQRRQAPP--PGLAEASRCLNEEARA 278 Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 G ++ R+ E+ R + + R + + LLVG S VGKTA+ L R + Sbjct: 279 GLLERAWERDLEVSRLAEAVTSRTRASVLLVGPSSVGKTALVHELVQRAEAATTGSPLHG 338 Query: 243 CTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 ++S G ++AG +Y G +++R K +++ L + + + + + + +D Sbjct: 339 LEVFSSSGGRIMAGMRYLGQWQERVKHMVEALRVRQAVLH--LDSLSELLSLGSGDTGLD 396 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 A + P L SG++ ++ T ++ + A + + I + S + + Sbjct: 397 VARQLLPALESGEVSLVLEATPEDVARAERTHAAFLQSLRHIAVAPLSAQAARNALQQAS 456 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 + VR+T A+ A EL ++ + P A+ ++ A VN Sbjct: 457 HRVGRARKVRFTPDALDRAGELTERFGSGPS-PGGAVSLLRAA------STEPGAAGEVN 509 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 A + P + V + R L R + V GQD+A L + + GL Sbjct: 510 AASVTRAFCTRTGYPLELVDSAIRLDPDALLRRFRERVVGQDEATLLLRNLVVTLKTGLA 569 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPG 539 +P+G+FL GPTGVGKTE + L++ L + L RFDM+EY + +RL+G G Sbjct: 570 DPSRPLGAFLLLGPTGVGKTESALALAEYLFGDVARLARFDMAEYAAPGSATRLVGEAGG 629 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 Q G L V + P V+LLDEIEKA V ++LLQV+ G LTD GR FRN Sbjct: 630 -----QQGSLARRVREQPFGVVLLDEIEKADAGVHDLLLQVLGEGRLTDATGRTVSFRNT 684 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTD---AMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 V+++T+N G R S+G + + F PE NRLD ++ + L+ D Sbjct: 685 VVLLTSNLGADSAGR-SLGFGERGPLERAAHYLGAAAAFFRPELLNRLDRVVPYRALTED 743 Query: 657 VIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 VI + + + + L ++GV + ++ LA G+D GARP+ R ++ + Sbjct: 744 VIQSLARRTLEAALSREGLSRRGVKVTFDEDVVKHLARTGFDARYGARPLKRAVEQQVVA 803 Query: 715 PLANELLFGSLVDGGQVTVALDKEK 739 PLA L + QV + ++ E Sbjct: 804 PLARWLAAQATSAPPQVVLRVEAEG 828 >UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales RepID=CLPB_WOLPM Length = 853 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 202/790 (25%), Positives = 352/790 (44%), Gaps = 84/790 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 ++ + + A +A H+ EHLL +L + S ++ + AC ++ ++ ++ Sbjct: 6 FTEKAKSLIQSAQMKALGAGHQIFMPEHLLKVMLEDESGLVQDLINACGGNVQSISDAVD 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + I++ + Q + +V + ++ + + + V +L + ++++ Sbjct: 66 SAIKKLPVI--EGPGSGGLQLSREIAKVFEDSIGIAKRNKDSFVAVERLLQGLTAQKDDT 123 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 +L ++ V+ + + ++ + GS +S + +T ++ +L Sbjct: 124 VGKILAENGVTPQKLNSVVAEMRK----------GSSADSPNSEEKLNAAKKYTKDVTEL 173 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP+IGR++E+ R +QV RR KNNP+L+GE GVGKTAI EGLA RIV DVP Sbjct: 174 AMQGKLDPVIGRDEEIRRTMQVSLRRTKNNPVLIGEPGVGKTAIVEGLANRIVANDVPLG 233 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASG 298 + D + +LD+G+L+AGTK+RG+FE+R KA++ +L + ILFIDE+HT++GAGA SG Sbjct: 234 LHDAKVLALDLGALIAGTKFRGEFEERLKAVINELSRAEGKVILFIDELHTLVGAGATSG 293 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA+NL+KP L+ G++R IG+TT E+ EKD ALARRFQ + I++P+ +T+ I+ Sbjct: 294 A-MDASNLLKPALARGEVRCIGATTLDEYRQHIEKDPALARRFQPVFISQPTETDTISIL 352 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK +YE HH +R T A+ AA L+ +YI DR LPDKAID+IDEA +R R+ SK + Sbjct: 353 RGLKERYEVHHGIRITDGAIIAAATLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSKPE 412 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL-----------------KMLVF 461 + + A +K ++ + LK + + + K + Sbjct: 413 VIDELERKVIQLKIEAEALKKESDENSKQRLKKINEEIENLNSKFADLNSKWQMEKNKIA 472 Query: 462 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDM 521 + E L A K + L G + E+ Q + + L+ ++ Sbjct: 473 RIQETAEKLDNARKELELVQRSGNLGRAGELMYGVIPQLENELKNQ--EKVTDSFLKKEV 530 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVL-LLDEIEKAHPDVFNILLQV 580 + + VS+ G P + + L + + V+ D IE V V Sbjct: 531 TGDDIANIVSKWTGIPVDNMMHSEKEKLLNMENEIGRRVIGQKDAIEAISNAVRRSRSGV 590 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST----DAMEEIKKIF 636 D F + + + T G E + + D S D E ++K Sbjct: 591 QDTNK---------PFGSFLFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHS 641 Query: 637 TPEFR------------NRLDN--------IIWFDHLSTDV------IHQVVD--KFIVE 668 + RL +I FD + + Q++D + Sbjct: 642 VSKLIGAPPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDS 701 Query: 669 LQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARP-----MARVIQDNLKKPLANELLFG 723 +D + L ++ + KG + R + + L ++F Sbjct: 702 HGKLIDFRNTILILTSNLGAEIMLKGNVDS--VRNEVMQIVKSAFRPEFLNRLDEIIIFH 759 Query: 724 SLVDGGQVTV 733 SL + Sbjct: 760 SLTRDDIYKI 769 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 213/786 (27%), Positives = 346/786 (44%), Gaps = 80/786 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 L++E+ + A+ ++ F+ VE LL L + + + L V L + Sbjct: 84 LSREIAKVFEDSIGIAKRNKDSFVAVERLLQGLTAQKDDTVGKILAENGVTPQKLNSVVA 143 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + ++ P SEE+ L A + + + + Sbjct: 144 EMRKGSSADSPNSEEK------------LNAAKKYTKDV------TELAMQGKLDPVIGR 185 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + R +VS N + G + L+ Sbjct: 186 DEEIRRTMQVSLRRTKNNPVLIGEPGVGKTAIVEGLANRIVANDVPLGLHDAKVLALDLG 245 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGE----SGVG------------KTAI 223 A + G E+ L+ I L R L + E G G K A+ Sbjct: 246 ALIAGTKFRGEFEERLKAVINELSRAEGKVILFIDELHTLVGAGATSGAMDASNLLKPAL 305 Query: 224 AEGLAWRIVQGDVPEVMADCT------------IYS----LDIGSLLAGTKYRGDFEKRF 267 A G I + E S D S+L G K R + Sbjct: 306 ARGEVRCIGATTLDEYRQHIEKDPALARRFQPVFISQPTETDTISILRGLKERYEVHHGI 365 Query: 268 K----ALLKQLEQDTNSI--LFIDE--IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVI 319 + A++ I F+ + I I A + ++D+ + L I++ Sbjct: 366 RITDGAIIAAATLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSKPEVIDELERKVIQLK 425 Query: 320 GSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVR 379 + E D +R +KI+ ++ +N K + E + R A + Sbjct: 426 IEA--EALKK--ESDENSKQRLKKINEEIENLNSKFADLNS-KWQMEKNKIARIQETAEK 480 Query: 380 --------AAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVA 431 V+ + L I ++ + S KK V DI ++V+ Sbjct: 481 LDNARKELELVQRSGNLGRAGELMYGVIPQLENELKNQEKVTDSFLKKEVTGDDIANIVS 540 Query: 432 RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 + IP ++ S+++ L N+ + + V GQ AIEA++ A++ +R+G+ +KP GSF Sbjct: 541 KWTGIPVDNMMHSEKEKLLNMENEIGRRVIGQKDAIEAISNAVRRSRSGVQDTNKPFGSF 600 Query: 492 LFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 LF GPTGVGKTE+ L++ L + LLRFDMSEYME+H+VS+LIGAPPGYVG++QGG Sbjct: 601 LFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVGYEQGGR 660 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT+AV + P+ V+L DEIEKA+PD+FN+LLQ++D G LTD++G+ DFRN +L++T+N G Sbjct: 661 LTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLIDFRNTILILTSNLG 720 Query: 609 VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVE 668 + ++ + M+ +K F PEF NRLD II F L+ D I++++D Sbjct: 721 AEIMLKGNV----DSVRNEVMQIVKSAFRPEFLNRLDEIIIFHSLTRDDIYKIIDVQFSY 776 Query: 669 LQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 LQ L ++ +S+ + QEA+ +A+ GYD GARP+ RVIQ+ ++ LA +L G +V+ Sbjct: 777 LQKTLAKRKLSISLLQEAKELIAQTGYDPEYGARPLKRVIQECIQNNLAKLVLSGEVVEN 836 Query: 729 GQVTVA 734 ++ V Sbjct: 837 DELIVY 842 >UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organisms RepID=CLPB_CHLCV Length = 864 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 177/493 (35%), Positives = 264/493 (53%), Gaps = 28/493 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSV--DLVALRQELE 59 ++ + +L AF A+ ++ +++ H L LL N + L + + L ++ Sbjct: 4 ISDAVSEALEKAFELAQSAKNPYVSENHFLKCLLENTESLFYLIIKDIHNNPKLLTSAVD 63 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + V+ E +P+ Q +L A + G ++G +VL+A + + Sbjct: 64 EALSLEPSVI---EGSAMPKPSPGLQSLLLDAKQEAKDLGDEYLSGDHVLLAFWKSNKEP 120 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A + ++S D+ I + R G++ +S +E + NL L Sbjct: 121 FASWKKTVKISLDDLKKLIINIRR----------GNRMDSPSAENNLRGLEKYCKNLTLL 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A+ G +DP+IGR++E+ R +QVL RR KNNP+L+GE GVGKTAIAEGLA RIVQGD+PE Sbjct: 171 AKEGKLDPVIGRDEEIRRTVQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRIVQGDIPES 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASG 298 + +Y LD+G+L+AG KYRG+FE+R K++LK +E D SILFIDE+HT++GAGA G Sbjct: 231 LKGKQLYVLDMGALIAGAKYRGEFEERLKSVLKDVESVDGESILFIDEVHTLVGAGATDG 290 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DAANL+KP L+ G + IG+TT E+ EKD AL RRFQ I +TEPS+E+ V I+ Sbjct: 291 A-MDAANLLKPALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFIL 349 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GL+ KYE H VR T A+ AAV L+ +YI DR LPDKAID+IDEA + R+ S Sbjct: 350 RGLREKYEIFHGVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPL 409 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 + + ++ + S ++ + IE L E + R Sbjct: 410 PIDEKERELAALIVKQEAIKREKAPSYQEEAAAMQQS-----------IEQLKEELAALR 458 Query: 479 AGLGHEHKPVGSF 491 E K + Sbjct: 459 LRWDEEKKLITGL 471 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 191/801 (23%), Positives = 343/801 (42%), Gaps = 92/801 (11%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELEA 60 + L+ L A A++ E+++ +H+LLA + + + L L++ + Sbjct: 82 SPGLQSLLLDAKQEAKDLGDEYLSGDHVLLAFWKSNKEPFASWKKTVKISLDDLKKLIIN 141 Query: 61 FIEQTTPVLPASEEE-------------------------RDTQPTLSFQRVLQRAVFHV 95 P++E RD + + Q + +R + Sbjct: 142 IRRGNRMDSPSAENNLRGLEKYCKNLTLLAKEGKLDPVIGRDEEIRRTVQVLSRRTKNNP 201 Query: 96 QSSGRNEVTGANVLVAI-FSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPG 154 G V + + + L+ ++ LD+ I+ + E + Sbjct: 202 MLIGEPGVGKTAIAEGLALRIVQGDIPESLKGKQLYVLDMGALIAGAKYRGEFEERLKSV 261 Query: 155 SQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER----------------- 197 + ++ T + A G +D + L R Sbjct: 262 LKDVESVDGESILFIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGATTLNEYQKY 321 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTA-IAEGLAWRIVQGDVPEVMADCTIYS--LDIGSLL 254 + R+ P+ V E + I GL + E+ I L+ LL Sbjct: 322 IEKDAALERRFQPIFVTEPSLEDAVFILRGL------REKYEIFHGVRITEGALNAAVLL 375 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 YR RF +I IDE ++I + +L P+ Sbjct: 376 ---SYR-YIPDRFL--------PDKAIDLIDEAASLIR--------MQIGSLPLPIDEKE 415 Query: 315 K-----IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI-----EETVQIINGLKPK 364 + I + ++ + E+ A+ + +++ E + +E ++I GLK K Sbjct: 416 RELAALIVKQEAIKREKAPSYQEEAAAMQQSIEQLK-EELAALRLRWDEEKKLITGLKEK 474 Query: 365 YEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA 424 + +++++ + + L + I E ++ V+ Sbjct: 475 KNSLENMKFSEEEAERVADYNRVAELRYSLIPALEEEIREDEEALNQRDNRLLQEEVDER 534 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 I VVA IP + + + + + L L + L+ V GQ AI A++++I+ AR GL Sbjct: 535 LIAQVVANWTGIPIQKMLEGEAEKLLVLEESLEERVVGQPFAISAVSDSIRAARVGLSDP 594 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYV 541 +P+G FLF GPTGVGKTE+ L+ L + ++RFDM+EYME+H+VS+LIG+PPGYV Sbjct: 595 QRPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMTEYMEKHSVSKLIGSPPGYV 654 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+++GG L++A+ + P++V+L DEIEKA +VFNILLQ+ D G LTD+ RK + +N + Sbjct: 655 GYEEGGSLSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDEGILTDSKKRKVNCKNALF 714 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAM----EEIKKIFTPEFRNRLDNIIWFDHLSTDV 657 +MT+N G +E + + + +KK F+PEF NR+D+I+ F L+T+ Sbjct: 715 IMTSNIGSQELADYCAKKGSRVSKETVLSVVAPTLKKYFSPEFINRIDDILPFVPLNTED 774 Query: 658 IHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 I ++V + + +L ++ V+L +L+E+GYD + GARP+ R+IQ + L+ Sbjct: 775 IVKIVGIQMRRVAQRLLERRVTLTWDDSVILYLSEQGYDSSFGARPLKRLIQQKVVTLLS 834 Query: 718 NELLFGSLVDGGQVTVALDKE 738 LL G + + + + K+ Sbjct: 835 KALLKGDIKSDTSIELTMSKD 855 >UniRef50_Q1D2Y9 ClpB family protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D2Y9_MYXXD Length = 1149 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 155/613 (25%), Positives = 282/613 (46%), Gaps = 24/613 (3%) Query: 142 TRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQV 201 EP + + + +++ ++LA+ G +D ++ + Sbjct: 221 LDSWEPRRRTAHRGPGEPPAKPPPTPTLDSVGVAWHRLAQEGQLDAAYEQDALVALLRTR 280 Query: 202 LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG 261 L + +LVG SGVGKT++ LA + E Y LD L+AG + G Sbjct: 281 LAAKDAEPVVLVGPSGVGKTSVLHALAQSLRAPTATEAERARPFYFLDGSRLIAGEGFFG 340 Query: 262 DFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGS 321 D++++ ++ + ++L + ++ AG ++ + A L+ PLL++ + V+ Sbjct: 341 DWQQQVLRAFREA-TEARALLSLGHAVELLDAGKSAHSDQNVAQLLLPLLAARDVAVMAE 399 Query: 322 TTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAA 381 T + ++ + +++ + AR F + + EP+ + +I+ + ++ A+ A Sbjct: 400 ATEETWAQVEQRNTSFARLFSVVRVAEPTPDALGRIVAKVAEDDALAAAMQVQPDALDEA 459 Query: 382 VELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSV 441 L +++ + + A + +V + A + IPE + Sbjct: 460 RFLCRRFLPYGAQVGNTVAFVRRLLA----SCAQASRTSVTRLEATRQFASESGIPEHLL 515 Query: 442 SQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGK 501 ++ D L V GQD A+E + + +AG+ +P+G LF GPTGVGK Sbjct: 516 RDDQPLASAHVRDFLASRVMGQDAAVERAASVVSVLKAGMSDVRRPLGVLLFVGPTGVGK 575 Query: 502 TEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPH 558 TE++ L++ L ++R DM EY + RL+G + G LT AV + P Sbjct: 576 TELSKALAELLFGAKERMVRLDMGEYAGPDALLRLMGDG------ETPGYLTSAVRRQPF 629 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG 618 V+LLDE+EKAHP V + LL V+ G LTD +GR DFRN ++++T+N G R +G Sbjct: 630 CVVLLDEVEKAHPAVHDALLGVLGEGRLTDASGRFTDFRNALIILTSNLGADTL-RARVG 688 Query: 619 LIHQDNSTDA-------MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQV 671 + D + E+++ F PE NR+D+++ F LS ++ ++V + + + Sbjct: 689 FDASGGAPDMASLRAHYLSEVQRFFRPEMFNRMDDVVVFSPLSAPLLRRLVVRELEAVCR 748 Query: 672 Q--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGG 729 + L LEV+ A++WLA +G+D GARP+ R ++ L P+A+ L + Sbjct: 749 RPGLSLHDALLEVTPAAQDWLALRGFDARYGARPLKRALERELVVPVADWLAAHPRMGPA 808 Query: 730 QVTVALDKEKNEL 742 +TV EL Sbjct: 809 NLTVDAGTTGLEL 821 >UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organisms RepID=Q4UAC3_THEAN Length = 1150 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 148/456 (32%), Positives = 245/456 (53%), Gaps = 37/456 (8%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 + ++ A E ++ + LL +L+++ + + L +++ L++ELE + Sbjct: 130 TDKAWEAITSLTEIANEFDSSYVEGDMLLYSLINDDNVLKVLNNLGLNVDNLKKELENHL 189 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSG----------------------- 99 ++ + + + VL + + G Sbjct: 190 KKQ--IRMSGSFGDRKILGRILENVLNISKRYKSEFGVSSITVLAHTATNPPKGSYIVPL 247 Query: 100 RNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNS 159 ++ ++L+ + +E L K++++ + + + K + + Sbjct: 248 DKYISVEHLLLGLAAEDTKFFRPYLTKYKITLEKLKDTVLSIRGKR----------KITT 297 Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 + + F+ +L +AR G +DP+IGR+ E+ R I++L RR KNNP+L+G+ GVG Sbjct: 298 RNTENSYKLLNKFSKDLTDMARNGKLDPVIGRDNEIRRTIEILSRRTKNNPVLLGDPGVG 357 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-T 278 KTAIAEGLA RIV GDVP+ + + + SLDI +++AGT YRG+FE+R K +L ++E Sbjct: 358 KTAIAEGLANRIVSGDVPDSLKNRKVISLDIAAIVAGTMYRGEFEERLKEILNEIENSQG 417 Query: 279 NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALA 338 ++FIDEIHT++GAG + G +DA N++KP+L+ G++R IG+TT QE+ EKD+AL Sbjct: 418 EIVMFIDEIHTLVGAGES-QGSLDAGNILKPMLARGELRCIGATTLQEYRQKIEKDKALE 476 Query: 339 RRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKA 398 RRFQ I I EP+IEET+ I+ GLK +YE HH VR + AV L+ +YI DR+LPDKA Sbjct: 477 RRFQPIYIDEPNIEETINILRGLKERYEVHHGVRILDSTLIQAVLLSNRYITDRYLPDKA 536 Query: 399 IDVIDEAGARARLMPVSKRKKTVNVADIESVVARIA 434 ID+IDEA A+ ++ SK + + + Sbjct: 537 IDLIDEAAAKLKIQLSSKPLQLDIIERKLLQLEMEK 572 Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats. Identities = 114/366 (31%), Positives = 193/366 (52%), Gaps = 58/366 (15%) Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 IP + +S ++ + L + L + GQ +AI+A+ A++ +R G+ KP+ + +F Sbjct: 782 GIPLNKLIKSQKEKILQLNEELHKRIIGQQEAIDAVVNAVQRSRVGMNDPKKPIAALMFL 841 Query: 495 GPTGVGKTEVTVQLSKALGI------------------ELLRFDMSEYMERHTVSRLIGA 536 GPTGVGKTE++ +++ L ++RFDMSEYME+H+VS+L+GA Sbjct: 842 GPTGVGKTELSKAIAEQLFDSGITLRCLLPRPPTTTKDAIIRFDMSEYMEKHSVSKLVGA 901 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEI-------------------EKAHPDVFNIL 577 PPGY+G++QGGLLT+A+ + P+++LL DE+ H DV+NIL Sbjct: 902 PPGYIGYEQGGLLTEAIRRKPYSILLFDEMYLHYGACSSPTGVLSYILKSTTHSDVYNIL 961 Query: 578 LQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER-KSIGLIHQDNSTDAMEEIKKIF 636 LQV+D+G LTD+ GRK +F N +++ T+N G + + M +++ F Sbjct: 962 LQVLDDGRLTDSLGRKVNFTNSLIIFTSNLGSQNILELARFPEKRNEMKNKVMTSVRQNF 1021 Query: 637 TPEFRNRLDNIIWFDHLST--------------------DVIHQVVDKFIVELQVQLDQK 676 +PEF NR+D I FD L+ + ++V+ +++L +L +K Sbjct: 1022 SPEFLNRIDEFIVFDSLTKIGTLRCSVTVLGHTVTNTPKRELKKIVNMEMMKLSNRLAEK 1081 Query: 677 GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 + L + A + +A+ GYD A GARP+ R IQ ++ P+A +L + + ++ Sbjct: 1082 NIKLSIDDAAMSHIADIGYDPAYGARPLKRTIQKQIESPIAVGILSDQYKEHDNLHISYK 1141 Query: 737 KEKNEL 742 K + Sbjct: 1142 DGKLTI 1147 >UniRef50_UPI00016C3DF6 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3DF6 Length = 1134 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 165/694 (23%), Positives = 282/694 (40%), Gaps = 47/694 (6%) Query: 63 EQTTPVLPASEEERDTQPT------LSFQRVLQRAVFHVQSSGRNEVTG--ANVLVAIFS 114 +Q+ P+ + P+ + RVL+ + + N V + L A+ Sbjct: 102 DQSASDSPSDPDGAPFGPSAPQFKGYTLARVLELGIEVIADPADNLVRLLQKDTLAALRR 161 Query: 115 EQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTT 174 S L+ + + + D + +++Q G ++ T Sbjct: 162 LNLSVN---LKSVAGVQTTLGFAVESHALAVRIPTLKDRAIRAETDQQDGKLTLLQQIAT 218 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 L + + ++ + + L + LL+G SGVGKTA L Sbjct: 219 LLGRDD-----EKTYEADETVSELTRALTGNPTQSVLLIGPSGVGKTAAVREL------A 267 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 A ++ ++AG G +++R + L+K + I F + ++ G Sbjct: 268 RRWRASARAPVFQTSGARVVAGQTGFGMWQERCQDLIKDATKRKAVIHF-GPLVELLEVG 326 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 + A ++P + G++ + T ++ I + D L F+ I + EP + Sbjct: 327 KSEHNSSGLATFLRPAIGRGELLCVAECTPEQLPLIEKLDPQLLDAFRHITVEEPGTAKG 386 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV 414 I+ + V A+ A L +Y P + + ++ Sbjct: 387 RAILASFAR--DNARRVT-EPAALAATDRLHRRYATYSAYPGRPLRFLENLI------RD 437 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 + + + ++ R +P + S L D V GQ A+ +T+ + Sbjct: 438 GAKGEPITETEVYDAFTRETGLPRAVLDPSVPLDLAATHDWFARRVIGQPDAVSLVTDLL 497 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVS 531 +AGL ++P+ S LF GPTGVGKTE+ +++ L L RFDMSEY + +V Sbjct: 498 ATVKAGLTRPNRPIASLLFIGPTGVGKTEMAKAVAEFLFGSKDRLTRFDMSEYADPVSVR 557 Query: 532 RLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 RL+G G GLLT V + P AVLLLDE+EKA F++LLQ + LTD G Sbjct: 558 RLVGGAFG-----SEGLLTARVREQPFAVLLLDEVEKADHSFFDLLLQALGEARLTDAGG 612 Query: 592 RKADFRNVVLVMTTNAGVRETERKSIGL-----IHQDNSTDAMEEIKKIFTPEFRNRLDN 646 R ADFRN V+++T+N G R S G ++ +++ PE NRLD Sbjct: 613 RLADFRNTVVILTSNLGADSFRRGSSGFLTGAVGKTESQEHFARAVEQFLRPEMFNRLDR 672 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 I+ F L +VI + D+ ++Q + + + +SL + LA GYD GARP+ Sbjct: 673 IVPFAPLGPEVIRGITDREWHKVQGRDGVRFRDLSLATDPALLDHLAAVGYDPRYGARPL 732 Query: 705 ARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 R ++ L PLA ++ + V V + Sbjct: 733 KRAMERELLAPLARQMNRHAGNVPLAVEVGVADG 766 >UniRef50_UPI0001746BB9 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746BB9 Length = 767 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 141/581 (24%), Positives = 254/581 (43%), Gaps = 24/581 (4%) Query: 167 ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 E + ++ A + RE ++ R L K + LLVG G GKTA+ Sbjct: 187 EHLGKVAEHVGSPAIRRHV-RTWEREADVARVQARLDL-SKGSTLLVGGPGSGKTAVLVD 244 Query: 227 LAWRIVQ--GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFI 284 A ++ + G P + L+AG ++ G ++++ + ++ +L + +L + Sbjct: 245 AARKVERELGLGPGEARSQRFWISSGSRLIAGQRWLGQWQEQLEKVIAELRAL-DGVLCL 303 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 + + ++ G +S G A + P L +G++RV+ T +E + + A + Sbjct: 304 ESLQELLRLGGSSPGS-SLAAFLVPYLQTGELRVVVEATPEEVESCERELPAFLDALGVV 362 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + + +I++ + + +TA A R A L ++ P + + E Sbjct: 363 RMEPLDEAQQARILDQAARSFSDQTQLDFTADAAREAGRLCRRFQPYAGFPGTPLGFMHE 422 Query: 405 AGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD 464 A RAR V++ + + A +P+ + + L V Q Sbjct: 423 ALNRAREAAA----PAVDLTHMRGLFATTTGLPDWLLDEKATLDAAALAQWFNERVVAQP 478 Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG------IELLR 518 +A++++ + +AGL +P+ LF GPTG GKT++ L L ++R Sbjct: 479 RAVQSVCRPLTKFKAGLNDPLRPLAVLLFTGPTGTGKTQLAKTLGDYLYPNRKAADRMVR 538 Query: 519 FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL 578 DMSEY RL+G G + + ++P VLLLDE+EKA P+VF+ L+ Sbjct: 539 LDMSEYAGYDAARRLLGEAGG-----EPSDFIKRMRQNPFTVLLLDEVEKASPEVFDTLM 593 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAME-EIKKIFT 637 V D G LTD GR FR+ V++MT+N G R+ S + F Sbjct: 594 NVFDEGRLTDTLGRTTWFRSTVIIMTSNLGARKGGSLGFTPGDAGASARVDPAAAAQFFR 653 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGY 695 PEF NRLD ++ FD L D + + + + L+ + L + + L+VS + + E+G+ Sbjct: 654 PEFFNRLDEVVVFDPLDRDAVKAIALREVASLEEREGLRDRDIKLQVSPTLLDKVCEQGF 713 Query: 696 DRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 D GARP+ R +++ + P+A L+ + + + Sbjct: 714 DPIYGARPLQRRLEELVVTPVARWLVAHPVAREVALVADWE 754 >UniRef50_A8RF26 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RF26_9FIRM Length = 682 Score = 371 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 174/676 (25%), Positives = 310/676 (45%), Gaps = 67/676 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 ++Q+++ L A AR+ + ++ EH+LLAL+ + L + + L+++L Sbjct: 34 MDQQVKALLECAKQEARDMGNNYIGSEHILLALMKDIHTPLSRILSSQGMYYFQLKEDLM 93 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + Q T + ++ A + + +++ V +A+ Sbjct: 94 ILFG------LKDQSIGEIQMTQIVENMMGAAEKLAEERNQRQLSVEVVSIALLKSGSCV 147 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A +L ++++ ++ + +G + ++ ++ N Sbjct: 148 ANEILHRYDLDEEVLLLQLENGLISE-----------------------LDKYSELRNLN 184 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 G D ++GR++EL+ + VL R+ K NPLLVGE+GVGKTA+ E LA I + + Sbjct: 185 RTEGYAD-IVGRKEELDFMVSVLLRKDKANPLLVGEAGVGKTALVEQLARDIRYKKI-KG 242 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D IY L++ +L+AGTKYRGDFE++ + +++ L++ ILFIDEIH +IGAG + G Sbjct: 243 LEDTQIYELNLNALVAGTKYRGDFEEKLQKIIRLLQKYPEVILFIDEIHQMIGAGKSE-G 301 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D A+++KP L+ G IR IG+TT +E+ EKDRAL RRFQ I I EPS+E+ ++ Sbjct: 302 SIDVASVLKPYLARGSIRCIGATTLEEYEKYIEKDRALERRFQIIHIQEPSLEQVYTMLE 361 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 + +YE+ H V +A+R V YI R PDKAIDV+D A + + K Sbjct: 362 AKQKEYESFHHVSVCEEALRCIVHYCNCYIPQRKFPDKAIDVLDLACVETKKQQQTNVDK 421 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 I+ V+ ++ IP S ++ + + L+ V GQ + L + + Sbjct: 422 I----MIQKVIEQLTDIPLVSYNRFHY-----VKEELQKRVIGQSTVVAKLLKQLAWIEQ 472 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPG 539 G+ KP+G +LF G VGK V ++ H R+ G Sbjct: 473 GVLT-DKPLGVWLFLGNAHVGKEYVIDVFNRCYF--------------HCEERVEINAIG 517 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 G + L+ + + P++++ + + A+ Q G + N +K D R+ Sbjct: 518 MEGTLEHALV--KLRRKPYSLVQISNLHLANEATLLFFQQAFQKGYIWHGN-QKVDLRHS 574 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 ++++ + + + I D +KK F +D I F L + Sbjct: 575 IVILQGDFDI------TQENILHFQPQDPYIGLKKCLGEAFLEVIDEIFLFADLQVEDKI 628 Query: 660 QVVDKFIVELQVQLDQ 675 Q+V + + + + L Sbjct: 629 QIVKEIVRKWNIPLQD 644 >UniRef50_A1ZCV4 ATPases with chaperone activity ClpC, two ATP-binding domain n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZCV4_9SPHI Length = 1137 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 150/571 (26%), Positives = 283/571 (49%), Gaps = 25/571 (4%) Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 G + +E LN L ++ +++ + + +++ R +++G VGK+ + Sbjct: 199 EGRDEIEKVGFELNDLYPS-ELNRAFYQDELVTQLDRLIYNRENVPMVILGPRRVGKSTL 257 Query: 224 AEGLAWRIVQGDVPEVMADC-TIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-----EQD 277 + R ++ + + + ++++D L+AG G +++RF+++++ E Sbjct: 258 LHEVVHRYLERNSEKELYHLDNLWNVDPSRLIAGMSIVGMWQRRFESIIRFAMNPITEYP 317 Query: 278 TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRAL 337 L+ + I + G ++ + ++++KP L +I+V+ T +E+ E DR Sbjct: 318 RRDKLYFNNIIALFRIGKSAQNDMTLSDVLKPYLQKREIQVVLEATPEEWDIASELDRGF 377 Query: 338 ARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDK 397 F+ + + EP+ ++++IIN ++ + E+ HD + + + +EL ++ + L Sbjct: 378 TDLFKVVRLYEPTETKSLRIINKVRVRLESEHDFKISNTGLLRLIELQKRFNQNMVLIGA 437 Query: 398 AIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 + + + ++ ++ V I + + E+ + T + Sbjct: 438 IAENLHQLSSK-------YSEEEVTPQTIVEEFSSKTHLNERLADPEVKITKDEFQQYIS 490 Query: 458 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---I 514 + GQ A++ L + + + +A L + +P GS+LF GPTGVGKT+ ++K L Sbjct: 491 RRLVGQQDAVDCLADVLHVIKAQLNNPERPFGSYLFIGPTGVGKTQAAKVVAKYLFNHED 550 Query: 515 ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVF 574 L+RFDM+E+++ VSRL+G G LT + +P+ VLL DEIEKAHPDV Sbjct: 551 SLVRFDMNEFIDGGAVSRLVGDLD-----YPEGQLTTKIRYNPYCVLLFDEIEKAHPDVH 605 Query: 575 NILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK-SIGLIHQDNSTDAMEEIK 633 N+LLQV+ G LTD GR F N V++MT+N G ++ +I S+ + ++ Sbjct: 606 NLLLQVLGEGRLTDALGRTISFCNTVIIMTSNLGAERVGKEINIQRRADLASSTYEKSVR 665 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD--QKGVSLEVSQEARNWLA 691 F PEF NR+DN+I F+ L+ + I Q+ I EL + ++ L VS+E LA Sbjct: 666 DFFRPEFINRIDNVIIFNKLNLEHIGQIAWLQIKELLKRHGFMRRHTILNVSEEVLQKLA 725 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLF 722 E G+D MG R + R I+ L +A++L+ Sbjct: 726 ENGFDPEMGGRALKRQIEKELTVLIADQLVE 756 >UniRef50_UPI000185C840 putative chaperone protein n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C840 Length = 825 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 182/839 (21%), Positives = 356/839 (42%), Gaps = 114/839 (13%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLSNP-SAREALEACSVDLVALRQELEAFI 62 E+ +L +A ARE+ + + HLL A+L+ + LE+ VD+ L + E I Sbjct: 10 PEVTKALEIAQKIARENMNARYSGGHLLKAVLNRDLPLLKLLESKGVDVFYLEEWAEVRI 69 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 E+ + P + A + E++ +V +A+ ++ + Sbjct: 70 EEALK----ATNTYSCDPDEVIDTIFTEAEAIREILDEEEISLWDVFIALSTQGVAFNFD 125 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARV 182 ++ + V+R +++ +S ++ + + ++ + N + + Sbjct: 126 QMKTYPVTRAELLE-------TTPLPAASAEKPFSSAPLSSTAKGFLQKYCVNKKDVLKA 178 Query: 183 GGIDPLI-GREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 + GR E ++ ++LCR K N L++G+SG+GKT + +++ VP+V++ Sbjct: 179 KASKEIPVGRVAETQKITEILCRFSKQNVLIIGDSGIGKTTLINSFVQKVISNQVPDVLS 238 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 + ++ LD+G+L+AG Y+G+ E R K + ++L+Q S+L I+E+H ++G Sbjct: 239 NLAVFELDMGALIAGASYKGEIEDRIKNIAQELKQYPKSVLIIEELHALLGNSF----DS 294 Query: 302 DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 ANL+K L+ G + VIG++T EF+ EK L F+K+++ E E +++ Sbjct: 295 SMANLLKSELTKG-LTVIGTSTIDEFTKKIEK-SGLEPLFEKVELQESDDETHFRMLRQT 352 Query: 362 KPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS-KRKKT 420 YE HH + T +A+ A+ L+ +Y+ ++ LP AID+ID + + S ++K Sbjct: 353 LSAYENHHHIAITDEAIWEAIRLSKRYLKEKSLPASAIDLIDHTMSVVKTAGASFLKEKN 412 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK----------------------- 457 + I + E+ ++ L ++ R+ Sbjct: 413 ALLTQIIHLEDNTQGFTEEQRKKNAAWLLNDIKQRIPFLLDASTLLEEEQTTTFETADNL 472 Query: 458 ------------------MLVFGQDKAIEALTEA--IKMARAGLGHEHKPVGSFLFAGPT 497 + +++ I + + + + Sbjct: 473 LSYGRKLITEAEKVAQEKRSHITEWDLAVLISQKTNIPIGKLKEEEKQRLSDMDAILSER 532 Query: 498 GVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 VG+ +S+A+ R +S+ + +G P G + L + + + Sbjct: 533 VVGQDHAIAIISEAVLEN--RSGLSKAGQPIGSFFFLG-PTGTGKTELAKSLAEFLFQDE 589 Query: 558 HAVL--------------------------------------------LLDEIEKAHPDV 573 +A++ L DEIEKAH V Sbjct: 590 NAIIRFDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQKPYSIVLFDEIEKAHASV 649 Query: 574 FNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIK 633 F++ LQ+MD G L D G++ DF N +++ T+N G + S + +S+ +E + Sbjct: 650 FDVFLQIMDEGKLHDRLGKEGDFSNAIILFTSNIGSDFIVK-SFTEGNIPSSSTLLEIMS 708 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFI-VELQVQLDQKGVSLEVSQEARNWLAE 692 + F PEF RL I+ F +S + ++ + + EL + +SL ++QE + LAE Sbjct: 709 RYFRPEFLGRLTEIVPFAPISKENALKIFEIHLKKELLNLTEGINISLNIAQEVKEHLAE 768 Query: 693 KGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 +GYD GARP+ +I+ L++PLA +L+ G +G + V E NE+ + + + Sbjct: 769 QGYDATYGARPLKGIIRAKLRRPLAKKLVAGEFKEGDTIEVLW--ENNEVAWKKSNITE 825 >UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 Tax=Helicobacter RepID=C3XMZ6_9HELI Length = 857 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 160/533 (30%), Positives = 273/533 (51%), Gaps = 30/533 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 L L+ +L + A ++++ + HL A+L+N S+ +AL ++D AL E + Sbjct: 7 LTNTLQETLEQGASLALHNKNQEIEPIHLFWAMLTNTSSLLNQALNRLNIDKTALELEAK 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + +S + + + + + L +A +G + + ++A E Sbjct: 67 SIASALPQ--SSSVTKENLKISRNLSDALNQADGLATKNGDSYIALDTFILANLQEP--- 121 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + ++ + + ++ G++ +S+ E +E F +L + Sbjct: 122 ----------TIRNLFSKFLDINELKKTFEAMRAGAKIDSQSADENLESLEKFGIDLTKK 171 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP+IGR++E+ +Q+L R+ KNNP+L+GE GVGKTA+ EGLA RIV+ +VP Sbjct: 172 AIEGKLDPVIGRDEEITHMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVKKEVPLS 231 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + + +LD+ +L+AG KYRG+FE R K ++ ++++ N ILFIDEIHTI+GAGA+ GG Sbjct: 232 LQNKRVIALDMSALVAGAKYRGEFEDRLKKVIDEVKKSGNVILFIDEIHTIVGAGASEGG 291 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G++ IG+TT +E+ FEKD AL RRFQ + + EP++ E +QI+ Sbjct: 292 -MDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQPVMLNEPNVNEALQILR 350 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+K + EAHH+V T A+ AA +L+ +YI DR LPDKAID+IDEA A ++ S+ + Sbjct: 351 GIKERLEAHHNVTITDSALVAAAKLSSRYITDRFLPDKAIDLIDEAAAELKMQIESEPSE 410 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNL------GDRLKMLVFGQDKAIEALTEA 473 V + S+ ++ + + + +K + Q + + + Sbjct: 411 LAKVKREMEALQVEKEALLMEKSEKNQARIAEIQKELSDKEEVKKALEAQFETEKQVFNK 470 Query: 474 IKMARAGLGHEH------KPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFD 520 I + + K G F A GK K + Sbjct: 471 IANIKIEIDSLRTQSTLAKRNGDFSKAAEIDYGKIPQLENELKEQNQKWENMQ 523 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 191/803 (23%), Positives = 344/803 (42%), Gaps = 89/803 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +++ L +LN A A ++ ++ ++ +LA L P+ R +D+ L++ EA Sbjct: 85 ISRNLSDALNQADGLATKNGDSYIALDTFILANLQEPTIRNLFSKF-LDINELKKTFEAM 143 Query: 62 IEQTTPVLPASEEE-------------------------RDTQPTLSFQRVLQRAVFHVQ 96 +++E RD + T Q ++++ + Sbjct: 144 RAGAKIDSQSADENLESLEKFGIDLTKKAIEGKLDPVIGRDEEITHMMQILIRKTKNNPI 203 Query: 97 SSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQ 156 G V V+ + + L +++ ++ + G + + Sbjct: 204 LLGEPGVGKTAVVEGLAQRIVKKEVPLSLQNKRVIALDMSALVAGAKYRGEFEDRLKKVI 263 Query: 157 PNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREK-----ELERAIQVLCRRRKN--- 208 ++ ++ T + A GG+D + EL + + Sbjct: 264 DEVKKSGNVILFIDEIHTIVGAGASEGGMDAANILKPALARGELHTIGATTLKEYRKYFE 323 Query: 209 ---------NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKY 259 P+++ E V + A +I++G + E + ++ +L+A K Sbjct: 324 KDAALQRRFQPVMLNEPNVNE-------ALQILRG-IKERLEAHHNVTITDSALVAAAK- 374 Query: 260 RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVI 319 + +I IDE A + + + L K R + Sbjct: 375 ------LSSRYITDRFLPDKAIDLIDE----AAAELKMQIESEPSELAKVK------REM 418 Query: 320 GSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPK----YEAHHDVRYTA 375 + ++ + + EK R +I EE + + + +++ Sbjct: 419 EALQVEKEALLMEKSEKNQARIAEIQKELSDKEEVKKALEAQFETEKQVFNKIANIKIEI 478 Query: 376 KAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN---------VADI 426 ++R LA + + + I + + N I Sbjct: 479 DSLRTQSTLAKRNGDFSKAAEIDYGKIPQLENELKEQNQKWENMQENGTLLRNAVLPESI 538 Query: 427 ESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 +V++R +IP K + Q ++D + + + LK V GQD A+ A+ AIK +AGL ++ Sbjct: 539 AAVISRWTQIPIKKMLQDEKDKILGIEEELKKDVVGQDNALHAIARAIKRNKAGLSELNR 598 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGF 543 P+GSFLF GPTGVGKTE L++ L L+R DMSEYME+H SRL+GAPPGYVG+ Sbjct: 599 PIGSFLFLGPTGVGKTESAKTLARFLFDSEKNLIRIDMSEYMEKHAASRLVGAPPGYVGY 658 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 ++GG LT+AV + P++V+L DEIEKAHPDVFN+LLQV+D+G LTDN G DFRN ++++ Sbjct: 659 EEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNMLLQVLDDGRLTDNKGVTIDFRNTIIIL 718 Query: 604 TTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVD 663 T+N S + E +K F PEF NRLD+II F+ L + I +V+ Sbjct: 719 TSNIASNAIMEISD---LTEREKAVKEALKGYFKPEFLNRLDDIIIFNPLGLEQITSIVE 775 Query: 664 KFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFG 723 +Q ++ ++ +++ + + A+ ++A+ G+D GARP+ R + + ++ LA+ +L Sbjct: 776 ILFKTIQKKVQERDINVTLEESAKEFIAKVGFDPIYGARPLKRALYEEIEDRLADLILQD 835 Query: 724 SLVDGGQVTVALDKEKNELTYGF 746 + +G V+ E + Sbjct: 836 KIKEGS--KVSFYAENGSIHARI 856 >UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=HS101_ARATH Length = 911 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 175/571 (30%), Positives = 281/571 (49%), Gaps = 37/571 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 + ++ A A H T HL AL+S+P+ +A+ + Q E Sbjct: 6 FTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGG--ENAAQSAE 63 Query: 60 AFIEQTTPVLPA-SEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 I Q LP+ S D + S +V++RA +S G + +++ + +S Sbjct: 64 RVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLE--DS 121 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 Q LL + V+ V + + G + S + ++ + +L + Sbjct: 122 QIRDLLNEVGVATARVKSEVEKLRG--------KEGKKVESASGDTNFQALKTYGRDLVE 173 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A G +DP+IGR++E+ R +++L RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVP Sbjct: 174 QA--GKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPN 231 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAAS 297 + D + SLD+G+L+AG KYRG+FE+R K++LK++E + ILFIDEIH ++GAG Sbjct: 232 SLTDVRLISLDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTE 291 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DAANL KP+L+ G++R IG+TT +E+ EKD A RRFQ++ + EPS+ +T+ I Sbjct: 292 -GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISI 350 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + GLK KYE HH VR +A+ A +L+ +YI RHLPDKAID++DEA A R+ S+ Sbjct: 351 LRGLKEKYEGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQP 410 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR-------------LKMLVFGQD 464 ++ N+ + E+ ++ + L + + Sbjct: 411 EEIDNLERKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERI 470 Query: 465 KAIEALTEAIKMARAGLGHEHK----PVGSFLFAGPTGVGKTEVTVQLSKALGIE-LLRF 519 I L + + L + + L G ++ + + +L Sbjct: 471 DEIRRLKQKREELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTE 530 Query: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLT 550 ++ VSR G P +G ++ L Sbjct: 531 NVGPEHIAEVVSRWTGIPVTRLGQNEKERLI 561 Score = 359 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 210/794 (26%), Positives = 352/794 (44%), Gaps = 50/794 (6%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 + L + A A + + V+ L++ LL + R+ L V ++ E+E Sbjct: 86 SSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLEDSQIRDLLNEVGVATARVKSEVEKLR 145 Query: 63 EQTTPVLPASEEERDTQPTLSFQR--VLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + ++ + + Q ++ R V Q E+ +V I S + Sbjct: 146 GKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDPVIGRDEEIRR---VVRILSRRTKNN 202 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGS--QPNSEEQAGGEERMENFTTNLNQ 178 L+ + V + VV ++ K + S + G + F L Sbjct: 203 PVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVRLISLDMGALVAGAKYRGEFEERLKS 262 Query: 179 LARVGGIDP--LIGREKELERAIQVLCRRRK-------NNPLLVGESGV-GKTAIAEGLA 228 + + +I E+ + L G+ G T + E Sbjct: 263 VLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAANLFKPMLARGQLRCIGATTLEEY-- 320 Query: 229 WRIVQGDVPEVMADCTIYSLDIG-----SLLAGTK--YRGDFEKRF--KALLKQLEQDTN 279 + V+ D +Y + S+L G K Y G R +AL+ + Sbjct: 321 RKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYEGHHGVRIQDRALINAAQLSAR 380 Query: 280 SI---LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 I D+ ++ A + +V + + + + + R+ EKD+A Sbjct: 381 YITGRHLPDKAIDLVDE-ACANVRVQLDSQPEEIDNLERKRMQLEIELHALER--EKDKA 437 Query: 337 LARRFQKIDITEPSIEETVQII----NGLKPKYEAHHDVRYTAKAVRAAVELAVKY---I 389 R ++ + + +Q + K + + ++ + + +++ A + Sbjct: 438 SKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQKREELMFSLQEAERRYDLA 497 Query: 390 NDRHLPDKAIDVIDEAGARAR---LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDR 446 L AI ++ A A+ + V I VV+R IP + Q+++ Sbjct: 498 RAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEHIAEVVSRWTGIPVTRLGQNEK 557 Query: 447 DTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTV 506 + L L DRL V GQ++A+ A++EAI +RAGLG +P GSFLF GPTGVGKTE+ Sbjct: 558 ERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQQPTGSFLFLGPTGVGKTELAK 617 Query: 507 QLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLL 563 L++ L + L+R DMSEYME+H+VSRLIGAPPGYVG ++GG LT+AV + P+ V+L Sbjct: 618 ALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYCVILF 677 Query: 564 DEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQD 623 DE+EKAH VFN LLQV+D+G LTD GR DFRN V++MT+N G G + + Sbjct: 678 DEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGAEHLLAGLTGKVTME 737 Query: 624 NSTD-AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV 682 + D M E++K F PE NRLD I+ FD LS D + +V + ++ V+L ++GV+L V Sbjct: 738 VARDCVMREVRKHFRPELLNRLDEIVVFDPLSHDQLRKVARLQMKDVAVRLAERGVALAV 797 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 + A +++ + YD GARP+ R ++ + L+ ++ + + V + D +L Sbjct: 798 TDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVREEIDENSTVYI--DAGAGDL 855 Query: 743 TYGFQSAQKHKAEA 756 Y +S A Sbjct: 856 VYRVESGGLVDAST 869 >UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI Length = 905 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 159/487 (32%), Positives = 264/487 (54%), Gaps = 19/487 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN-PSAREALEACSVDLVALRQELEA 60 ++ ++ + A+ ++++ + VEHL++ALL +A + L ++ L Q+++A Sbjct: 9 FTEQAWDAIVKSQDVAKRYQNQQLEVEHLIIALLEQQGTANKILSRSGIEPEKLLQQVDA 68 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 F+ + P + L A + + + L+A ++ Sbjct: 69 FVRRQ----PKVGSIEHLYLGQGLETFLDLADQAKEKWEDKFIAVEHFLLAFHEDKRLGN 124 Query: 121 AYL------LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTT 174 + L + ++ S+ + + + + Sbjct: 125 KLIGGGTPQLPTRPGFAPPQTTLQIEFKELEATIKAFRGSSKVEDQNPEATYDALAKYGR 184 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +L +LA+VG +DP+IGR++E+ R + L RR KNNP+L+GE GVGKTAIAEGLA RIV G Sbjct: 185 DLTELAKVGKLDPVIGRDEEVRRVVSCLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNG 244 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGA 293 DVPE + + + SLD+GSL+AG K+RG+FE+R +++L+++ D +LFIDE+HT++GA Sbjct: 245 DVPESLKERQLISLDMGSLIAGAKFRGEFEERLRSVLREVTHSDGQIVLFIDELHTVVGA 304 Query: 294 GAASGGQV--DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 G+ G DA NL+KP+L+ G++R IG+TT E+ EKD AL RRFQK+++ +PS+ Sbjct: 305 GSGGGNSSGVDAGNLLKPMLARGELRCIGATTIDEYRKHIEKDAALERRFQKVEVGQPSV 364 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 E+T+ I+ GLK +YE HH V+ T A+ AA L+ +YI+DR LPDKAID++DEA A+ ++ Sbjct: 365 EDTISILRGLKDRYETHHGVKITDAALVAAATLSNRYISDRFLPDKAIDLVDEAAAQLKM 424 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 SK + + + E +S ++++ KN L V A+E +T Sbjct: 425 EITSKPVELEAIDRRIMQLEMEKLSIEGELSGTNKE--KNSEAILSTKV---SPALERIT 479 Query: 472 EAIKMAR 478 I + Sbjct: 480 NEINSLK 486 Score = 327 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 146/403 (36%), Positives = 222/403 (55%), Gaps = 9/403 (2%) Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVEL-AVKYINDRHLPDKAIDVIDEAGARARLMPV 414 +++N + ++ + A +L + L D + ++ Sbjct: 501 ELLNSINSLKAEEDKIKVQIEQAERAYDLNTAAQLKYGQLETVHRDREAQEAELLKVQAQ 560 Query: 415 SK--RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTE 472 ++ V DI ++VA+ IP + +S+R L L L V GQ +A+ A+ Sbjct: 561 GSFLLREQVTDGDIATIVAKWTGIPVNRLLESERQKLLQLEKHLHQRVIGQSEAVAAVAA 620 Query: 473 AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHT 529 AI+ ARAG+ +P+GSF+F GPTGVGKTE+ L+ L L+R DMSEYME+H Sbjct: 621 AIRRARAGMKDPGRPIGSFMFLGPTGVGKTELARALAGFLFDRDDALVRVDMSEYMEKHA 680 Query: 530 VSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDN 589 V+RL+GAPPGYVG+DQGG L++AV +HP++++L DE+EKAHPDVFNILLQV+D+G +TD+ Sbjct: 681 VARLVGAPPGYVGYDQGGQLSEAVRRHPYSLVLFDEVEKAHPDVFNILLQVLDDGRITDS 740 Query: 590 NGRKADFRNVVLVMTTNAGVRETER-KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNII 648 GR DF N V+VMT+N G +++ M ++K F PEF NR+D II Sbjct: 741 QGRVIDFSNTVIVMTSNIGSEYILDVAGDDSKYEEMYKRVMGALRKHFRPEFLNRVDEII 800 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 F L + Q+V+ + ++ L ++ +SL+++ + + E GYD GARP+ R I Sbjct: 801 LFHTLRKSELRQIVEIQVKRIERLLGEQKISLQLTDATLDHITEVGYDPVYGARPLKRAI 860 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 Q L+ PLAN++L V G V + L + + K Sbjct: 861 QRELENPLANQILENRFVCGDVVIIDFVDSG--LVFKKKEEGK 901 >UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellular organisms RepID=CLPB2_CHLTE Length = 442 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 159/444 (35%), Positives = 251/444 (56%), Gaps = 17/444 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + +L A A +++ + EHLL +L + A + + L ++ Sbjct: 8 FTVKAQEALQAASMLASSKQNQQIEPEHLLSVMLGDHDNIACQIARKLETPVDTLLSVVD 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I++ V AS + + +V A+ + ++ ++ +A+ SE + Sbjct: 68 REIDRIPKVTGASATGQ--YISSDLGKVFDTALKEAEQLKDEYISSEHLFIAM-SEAGVK 124 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + LL+ + R ++ ++ S + S+ + ++ ++ NLN L Sbjct: 125 VSKLLKDAGIDRNAILKVLT----------SFRGSQRVTSQNAEESYQSLKKYSRNLNDL 174 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 G +DP+IGR+ E+ R +Q+L RR KNNP+L+GE GVGKTAI EG+A RIV GDVPE Sbjct: 175 VIKGKLDPVIGRDDEIRRVLQILSRRTKNNPVLIGEPGVGKTAIVEGIAQRIVGGDVPEN 234 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASG 298 + I +LDI +L+AGTK+RG+FE+R KAL+K+++ D ILFIDE+H ++GAG+A Sbjct: 235 LKSKQIAALDIAALVAGTKFRGEFEERLKALVKEVQASDGEVILFIDELHLLVGAGSAE- 293 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DAAN++KP L+ G++R IG+TT E+ EKD AL RRFQ + + +PS+E+TV I+ Sbjct: 294 GSMDAANILKPALARGELRCIGATTLDEYRKHIEKDAALERRFQTVIVDQPSVEDTVSIL 353 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK KYE HH VR A+ AA EL+ +YI DR LPDKAID+IDEA +R RL S+ + Sbjct: 354 RGLKEKYEIHHGVRIKDAALVAAAELSNRYIADRFLPDKAIDLIDEACSRLRLEIDSEPE 413 Query: 419 KTVNVADIESVVARIARIPEKSVS 442 + + + ++ + Sbjct: 414 ELDRINRELRRLEIEREALKRELE 437 >UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HY88_9ACTO Length = 861 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 163/443 (36%), Positives = 245/443 (55%), Gaps = 17/443 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL---SNPSAREALEACSVDLVALRQEL 58 L ++N A RA H +T HLLLALL N + + L A D A+R Sbjct: 14 LTNRSRDAINAAGNRAVTEGHPDLTPAHLLLALLQGQDNENIVDLLAAVDADQAAVRAGA 73 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E + V A QP V+ A + G ++ ++LV I ++ Sbjct: 74 EKALGSLPSV--AGSTVAPPQPNRDLLAVIADAQSRAKDLGDEYLSTEHLLVGIAAKG-G 130 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 AA +L + +++ Q + G + + + G + +E F T+ Sbjct: 131 PAAEVLTGQGATPKKLIDAF----------QKARGGRRVTTADPEGQYKALEKFGTDFTA 180 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 AR G +DP+IGR++E+ R +QVL RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVPE Sbjct: 181 AARDGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPE 240 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAAS 297 + D + SLD+ +++AG KYRG+FE+R K +L ++ D I FIDE+HT++GAGA Sbjct: 241 SLKDKRLVSLDLSAMVAGAKYRGEFEERLKTVLAEIRDSDGQIITFIDELHTVVGAGAGG 300 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 +DA N++KP+L+ G++R++G+TT E+ EKD AL RRFQ++ + EP++E+T+ I Sbjct: 301 DSSMDAGNMLKPMLARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDTIAI 360 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + GLK +YEAHH V+ A+ AA L+ +YI R LPDKAID++DEA +R R+ S Sbjct: 361 LRGLKGRYEAHHKVQIADSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSP 420 Query: 418 KKTVNVADIESVVARIARIPEKS 440 + + + K Sbjct: 421 LEIDELQRGVDRLKMEELALVKE 443 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 175/737 (23%), Positives = 306/737 (41%), Gaps = 93/737 (12%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP-SAREALEACSVDLVALR------ 55 N++L + A +RA++ E+++ EHLL+ + + A E L L Sbjct: 94 NRDLLAVIADAQSRAKDLGDEYLSTEHLLVGIAAKGGPAAEVLTGQGATPKKLIDAFQKA 153 Query: 56 ---------------QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS-- 98 + LE F T + + +RV+Q +++ Sbjct: 154 RGGRRVTTADPEGQYKALEKFGTDFTAAARDGKLDPVIGRDQEIRRVVQVLSRRTKNNPV 213 Query: 99 --GRNEVTGANVLVAIFSE-QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGS 155 G V V+ + + L+ + LD+ ++ + E + Sbjct: 214 LIGEPGVGKTAVVEGLAQRIVKGDVPESLKDKRLVSLDLSAMVAGAKYRGEFEERLKTVL 273 Query: 156 QPNSEEQAGGEERMENFTTNLNQLA-------RVGGIDPLIGR-----------EKELER 197 + ++ T + A + P++ R ++ ER Sbjct: 274 AEIRDSDGQIITFIDELHTVVGAGAGGDSSMDAGNMLKPMLARGELRMVGATTLDEYRER 333 Query: 198 AIQVLCRRRKNNPLLVGESGVGKT-AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAG 256 + R+ +LV E V T AI GL R ++ + + + Sbjct: 334 IEKDPALERRFQQVLVAEPTVEDTIAILRGLKGRYEAHHKVQIADSALVAAAALSDRYIT 393 Query: 257 TKYRGDFEKRFKALLKQLEQD-----TNSILFIDEIH---------TIIGAGAASGGQVD 302 +++ + L+ + +S L IDE+ + + Sbjct: 394 SRFL---PDKAIDLVDEAASRLRMEIDSSPLEIDELQRGVDRLKMEELALVKETDPASRE 450 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 ++ L+ + + G T +EK++ R + E +E + + G Sbjct: 451 RLERLRRDLADKEEELRGLT------ARWEKEKQSLNR-----VGEL--KEKLDELRGQA 497 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 + + D + +P D+ + A + + K+ V Sbjct: 498 ERAQRDGDFD------------TASKLLYGEIPTLERDLEAASEAEEEVSKDTMVKEEVG 545 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 DI VA IP + + + L + + L + GQ +A+ A+++A++ RAG+ Sbjct: 546 ADDIADTVAAWTGIPAGRLLEGETQKLLRMEEELGKRLIGQGEAVRAVSDAVRRTRAGIA 605 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPG 539 +P GSFLF GPTGVGKTE+ L+ L + ++R DMSEY E+HTVSRL+GAPPG Sbjct: 606 DPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVSRLVGAPPG 665 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+++GG LT+AV + P++V+LLDE+EKAHP+VF+ILLQV+D+G LTD GR DFRN Sbjct: 666 YVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNA 725 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 +LV+T+N G + + +E ++ F PEF NRLD+++ F L+ D + Sbjct: 726 ILVLTSNLGSQFLVDPIT--SETEKKEQVLEVVRASFKPEFLNRLDDLVVFSALTKDELG 783 Query: 660 QVVDKFIVELQVQLDQK 676 ++ I L +L ++ Sbjct: 784 RIARLQIDRLAKRLAER 800 >UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q3L1D0_VITVI Length = 911 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 173/585 (29%), Positives = 282/585 (48%), Gaps = 35/585 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 + +L A A H +T H+ +AL+ N R+A+ + A +E Sbjct: 6 FTHKTNETLAGAHELAMNSGHAQLTPLHVAVALITDHNGILRQAIIGAGGNEEAA-NSVE 64 Query: 60 AFIEQTTPVLPASEEERD-TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + LP D + + +V++RA +S G + +++ + +S Sbjct: 65 RVFNKALKKLPTQSPPPDEIPVSTTLIKVVRRAQSSQKSRGDTHLAVDQLILGLLE--DS 122 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 Q LL++ VS V + + G + S + ++ + +L + Sbjct: 123 QIGDLLKEAGVSTSRVKSEVEKLRG--------KEGKKVESASGDTTFQALKTYGRDLVE 174 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A G +DP+IGR++E+ R I++L RR KNNP+L+GE GVGKTA+ EGLA RIV+GDVP Sbjct: 175 QA--GKLDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPS 232 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAAS 297 +A+ + +LD+G+L+AG KYRG+FE+R K++LK++ E + ILFIDEIH ++GAG Sbjct: 233 NLAEVRLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTE 292 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DAANL KP+L+ G++R IG+TT +E+ EKD A RRFQ++ + EPS+ +T+ I Sbjct: 293 -GSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISI 351 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + GLK +YE HH VR +A+ A +L+ +YI RHLPDKAID++DEA A R+ S+ Sbjct: 352 LRGLKERYEGHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQP 411 Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR-------------LKMLVFGQD 464 ++ N+ + EK ++ + L + + Sbjct: 412 EEIDNLERKRMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERI 471 Query: 465 KAIEALTEAIKMARAGLGHEHK----PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFD 520 + L + + L + + L G + + +L Sbjct: 472 DELRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGTTDENMMLTET 531 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDE 565 + VSR G P +G + L + V+ D+ Sbjct: 532 VGPEQIAEVVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQ 576 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 202/801 (25%), Positives = 338/801 (42%), Gaps = 79/801 (9%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 + L + A + + + V+ L+L LL + + L+ V ++ E+E Sbjct: 87 STTLIKVVRRAQSSQKSRGDTHLAVDQLILGLLEDSQIGDLLKEAGVSTSRVKSEVEKLR 146 Query: 63 EQTTPVLPASEEERDTQP---------------------TLSFQRVLQRAVFHVQSS--- 98 + + ++ + Q +RV++ +++ Sbjct: 147 GKEGKKVESASGDTTFQALKTYGRDLVEQAGKLDPVIGRDEEIRRVIRILSRRTKNNPVL 206 Query: 99 -GRNEVTGANVLVAIFSE-QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQ 156 G V V+ + L + + LD+ ++ + E + + Sbjct: 207 IGEPGVGKTAVVEGLAQRIVRGDVPSNLAEVRLIALDMGALVAGAKYRGEFEERLKSVLK 266 Query: 157 PNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER----------AIQVLCRRR 206 E + ++ L G +D + L R + Sbjct: 267 EVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVE 326 Query: 207 KNNP-------LLVGESGVGKT-AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 K+ + V E V T +I GL R +G + D + + + L+ Sbjct: 327 KDAAFERRFQQVYVAEPSVPDTISILRGLKERY-EGHHGVRIQDRALV---VAAQLSSRY 382 Query: 259 YRGDF-EKRFKALLKQLEQDTNSILFI--DEIHTIIGAGAASGGQVDAANLIKPLLSSGK 315 G + L+ + + L +EI + ++ A K S + Sbjct: 383 ITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKAR 442 Query: 316 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTA 375 + E + L + Q + + +E + + LK K Sbjct: 443 LV--------EVRRELD---DLRDKLQPLMMKYKKEKERIDELRRLKQK---------RE 482 Query: 376 KAVRAAVELAVKY--INDRHLPDKAIDVIDEAGARAR--LMPVSKRKKTVNVADIESVVA 431 + + A E +Y L AI ++ A A +TV I VV+ Sbjct: 483 ELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGTTDENMMLTETVGPEQIAEVVS 542 Query: 432 RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 R IP + Q+D++ L L +RL V GQD+A+ A+ EA+ +RAGLG +P GSF Sbjct: 543 RWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTGSF 602 Query: 492 LFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 LF GPTGVGKTE+ L++ L + L+R DMSEYME+H+VSRLIGAPPGYVG D+GG Sbjct: 603 LFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHDEGGQ 662 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT+AV + P++V+L DE+EKAH VFN LLQV+D+G LTD GR DF N V++MT+N G Sbjct: 663 LTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTSNLG 722 Query: 609 VRETERKSIGLIHQDNSTD-AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 +G ++ D M+E+++ F PE NRLD I+ FD LS D + +V + Sbjct: 723 AEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKVARLQMK 782 Query: 668 ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVD 727 ++ +L ++G++L V+ A + + + YD GARP+ R ++ + L+ L+ + + Sbjct: 783 DVASRLAERGIALAVTDAALDVVLAESYDPVYGARPIRRWLEKKVVTELSKMLIREEIDE 842 Query: 728 GGQVTVALDKEKNELTYGFQS 748 V + L Y ++ Sbjct: 843 NSTVYIDAGVSGKGLAYRVEN 863 >UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms RepID=B5Y5I5_PHATR Length = 997 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 151/395 (38%), Positives = 233/395 (58%), Gaps = 15/395 (3%) Query: 40 AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSG 99 + L V+L LR EL+ ++ + P + + + Q+VL+ A Q+ G Sbjct: 142 VEKILNKAGVNLNRLRCELDEYLAKQ----PRVSDPTNKIMGRTLQKVLETARNGKQALG 197 Query: 100 RNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNS 159 + V+ +++A+ E + L + V DV+ + +K P S Sbjct: 198 DSYVSTEGLVLAMVKEDDKFTREALMRQNVKYTDVLEVVKEMRKKSGPAISR-------- 249 Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 + + + +L + A G +DP+IGR+ E+ RAIQ+L RR KNNP+L+G+ GVG Sbjct: 250 -SAESMYDALTKYGVDLTERAEQGKLDPVIGRDDEIRRAIQILSRRTKNNPVLIGDPGVG 308 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DT 278 KTAIAEG+A R++ GDVP+ + +C + LD+G+L+AG RG FE+R KA+++++ Q D Sbjct: 309 KTAIAEGIAQRMIDGDVPDSLKNCRLIGLDMGALVAGASMRGQFEERLKAVVEEVTQSDG 368 Query: 279 NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALA 338 ILFIDE+HT++GAG A+ G +DA+NL+KP L+ G++R IG+TT E+ EKD+AL Sbjct: 369 EIILFIDEMHTVVGAG-AAQGSMDASNLLKPALARGQLRCIGATTINEYRKYIEKDKALE 427 Query: 339 RRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKA 398 RRFQ++ I +P+ E+TV I+ GLKP+YE HH VR +A+ AA +L+ +YI DR LPDKA Sbjct: 428 RRFQQVMIDQPTPEDTVSILRGLKPRYELHHGVRIRDEALLAAAKLSHRYIPDRFLPDKA 487 Query: 399 IDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 433 ID++DEA A+ SK + + Sbjct: 488 IDLVDEACAKLNNEITSKPTILDEIDRRIIQLEME 522 Score = 338 bits (866), Expect = 5e-91, Method: Composition-based stats. Identities = 204/815 (25%), Positives = 359/815 (44%), Gaps = 93/815 (11%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQEL 58 ++ + L+ L A + +++ E L+LA++ REAL +V + + + Sbjct: 177 IMGRTLQKVLETARNGKQALGDSYVSTEGLVLAMVKEDDKFTREALMRQNVKYTDVLEVV 236 Query: 59 EAFIEQTTPVLPASEEE----------------------RDTQPTLSFQRVLQRAVFHVQ 96 + +++ P + S E +R +Q + Sbjct: 237 KEMRKKSGPAISRSAESMYDALTKYGVDLTERAEQGKLDPVIGRDDEIRRAIQILSRRTK 296 Query: 97 SS----GRNEVTGANVLVAIFSEQ-ESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSS 151 ++ G V + I + L+ + LD+ ++ + + + + Sbjct: 297 NNPVLIGDPGVGKTAIAEGIAQRMIDGDVPDSLKNCRLIGLDMGALVAGASMRGQFEERL 356 Query: 152 DPGSQPNSEEQAGGEERMENFTTNLNQLARVGGID------PLIGREK----------EL 195 + ++ ++ T + A G +D P + R + E Sbjct: 357 KAVVEEVTQSDGEIILFIDEMHTVVGAGAAQGSMDASNLLKPALARGQLRCIGATTINEY 416 Query: 196 ERAIQ---VLCRRRKNNPLLVGESGVGKT-AIAEGLAWRIVQGDVPEVMADCTIYSLDIG 251 + I+ L RR + +++ + T +I GL E+ I Sbjct: 417 RKYIEKDKALERRFQQ--VMIDQPTPEDTVSILRGL------KPRYELHHGVRIRD---E 465 Query: 252 SLLAGTKYRGDF------EKRFKALLKQL-------EQDTNSILFIDEIHTIIGAGAASG 298 +LLA K + + L+ + +IL DEI Sbjct: 466 ALLAAAKLSHRYIPDRFLPDKAIDLVDEACAKLNNEITSKPTIL--DEIDR--RIIQLEM 521 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQ-EFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 ++ + + G +T+ + I E+ +L Q++++ + + V Sbjct: 522 ERLSLQSDFEKYEEDG--NTFKATSENFRLAKIDEELGSLKYEQQELNMKWMAEKGAVDR 579 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAV----KYINDRHLPDKAIDVIDEAGARARLMP 413 + +K K V+ + +L KY + L + ++ + Sbjct: 580 LKDVKEKIAK---VKLDIEKFEREFDLNKAAELKYSDLPPLERELEELENIGQYDLGPGE 636 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 + V DI VVA IP + +S+RD + +GD+L+ + GQD+AI +TEA Sbjct: 637 ERMLRDEVVADDIAGVVAVWTGIPPGKLLESERDRILTMGDKLRERLIGQDEAIRVVTEA 696 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTV 530 ++ +RAGL KP+ S +F GPTGVGKTE L++ + L+R DMSEYME+HTV Sbjct: 697 VQRSRAGLNDPSKPIASLIFLGPTGVGKTECAKALAEFMFDSEDALIRIDMSEYMEKHTV 756 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 SRL+GAPPGYVG+D+GG LTDA+ + P+AVLL DE+EKAHPDVFN++LQ++D+G LTD+ Sbjct: 757 SRLLGAPPGYVGYDEGGQLTDAIRRRPYAVLLFDEMEKAHPDVFNVMLQLLDDGRLTDSK 816 Query: 591 GRKADFRNVVLVMTTNAGVRETER---KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 G +FRN + + T+N G +E S + + E +++ F PEF NR+D Sbjct: 817 GNTVNFRNTICIFTSNVGSQEILDLNGSSEIGDQEIMRSRVTEAMRERFRPEFLNRIDEH 876 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 + F+ L+ + + +V + L+ +L++K + L + +EA ++LAE G+D GARP+ R Sbjct: 877 VIFNSLNKNNLRGIVVLEVRRLEKRLEEKQMRLVLREEALDFLAEVGFDPVYGARPLKRT 936 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 IQ L+ +A +L G VDG + V + E+ + Sbjct: 937 IQRELETVVARGILGGEFVDGDTILVDVVNERLNV 971 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 107/320 (33%), Gaps = 44/320 (13%) Query: 186 DPLIGREKELERAIQVLCR---------RRKNNPLLVGESGVGKTAIAEGLAW------- 229 + LIG+++ + + + R + + + +G +GVGKT A+ LA Sbjct: 681 ERLIGQDEAIRVVTEAVQRSRAGLNDPSKPIASLIFLGPTGVGKTECAKALAEFMFDSED 740 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHT 289 +++ D+ E M T+ L L A Y G E L + + ++L DE+ Sbjct: 741 ALIRIDMSEYMEKHTVSRL----LGAPPGYVGYDEG--GQLTDAIRRRPYAVLLFDEM-- 792 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 D N++ LL G++ T F N + + +D+ Sbjct: 793 -------EKAHPDVFNVMLQLLDDGRLTDSKGNTVN-FRNTICIFTSNVGSQEILDLNGS 844 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 S +I+ + R+ + + E I + + ++ R Sbjct: 845 SEIGDQEIMR---SRVTEAMRERFRPEFLNRIDEHV---IFNSLNKNNLRGIVVLEVRRL 898 Query: 410 RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKA--- 466 K+ + V + +A + P R + L + + G + Sbjct: 899 EKRLEEKQMRLVLREEALDFLAEVGFDPVYGARPLKRTIQRELETVVARGILGGEFVDGD 958 Query: 467 ---IEALTEAIKMARAGLGH 483 ++ + E + + RA Sbjct: 959 TILVDVVNERLNVRRATNAD 978 >UniRef50_A1ZYY8 ATP-dependent Clp protease, ATP-binding subunit ClpC, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYY8_9SPHI Length = 1144 Score = 365 bits (936), Expect = 4e-99, Method: Composition-based stats. Identities = 152/593 (25%), Positives = 274/593 (46%), Gaps = 29/593 (4%) Query: 155 SQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVG 214 S+ +Q E + L+ L G KE ++ + + + +N+ L+VG Sbjct: 173 SEQEDIQQRDQESILPQIAHRLSANEVE-----LFGLTKEYDQLLTTMKAKHRNSVLVVG 227 Query: 215 ESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL 274 SG GKTA+ + ++D +++ + LL G +E+ + ++L Sbjct: 228 GSGKGKTALIKEFCRV----KGQHGLSDVSVWEVSAAQLLHRLTGLGSWEEYLADVCREL 283 Query: 275 EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD 334 + + IL++ + G G + A+ ++ +S G+I +I T +E S I + Sbjct: 284 RKSGD-ILYVSNFSELFEVGQYVGNNMSMADYLRDYISRGEITIISECTPEEASRIEMRS 342 Query: 335 RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHL 394 I+I + S E+ ++I+ + +A++ + L Y L Sbjct: 343 PGYLGLLNTINIEDMSDEQVLEIVTKKVNYIATQKNCAVEEEAIQEILRLQQWYTPYSEL 402 Query: 395 PDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD 454 P K I + + + K I + +PE ++ + + Sbjct: 403 PGKTIHFLASIVSDKEKKEIKIIDKPA----IFERFCQETGMPEFMINPEIALEVDKMQH 458 Query: 455 RLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI 514 + ++GQ++AI +++ + +A + KP+ S LF GPTGVGKTE+ L++ + Sbjct: 459 YFQTNIYGQNEAIHTVSDLLVAIKAAVVRRGKPLASLLFVGPTGVGKTEMAKVLAQFMFG 518 Query: 515 E---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHP 571 ++RFDMSEY + + RL G G GLLT ++ + P +VLL DE+EK HP Sbjct: 519 NRNKMIRFDMSEYTDTRAIMRLTGD-----GTSGEGLLTSSIRQDPFSVLLFDELEKVHP 573 Query: 572 DVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA--- 628 +++LLQ++ G LTD GR ADF + +++MT+N G R + SIG + N +A Sbjct: 574 SFYDLLLQILGEGRLTDARGRVADFCSTIIIMTSNIGARSFQTGSIGFVETKNEAEAAAA 633 Query: 629 --MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQ 684 E++ F PE NRLD +I F L ++ +++D+ I ++ + + + + + + Q Sbjct: 634 HFKSEVQAYFRPELFNRLDRVIAFAPLDKPIVRKIIDREIDLVKKREGIKGRNLEVNIGQ 693 Query: 685 EARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDK 737 ++L +KGY+ GAR + R +Q L PL+ L + QV V L K Sbjct: 694 NVLDYLGKKGYNANYGARFLQRTLQTQLIVPLSQALNEYDFLQPLQVDVFLKK 746 >UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria RepID=D1B2U8_SULD5 Length = 856 Score = 364 bits (934), Expect = 6e-99, Method: Composition-based stats. Identities = 156/493 (31%), Positives = 269/493 (54%), Gaps = 24/493 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 L ++ ++ A + A ++ T H+ L++N ++ + ++D A+ E++ Sbjct: 8 LTNQMREAIESAISLALHSKNNEATPLHVTWGLITNSASILNQVFNKMNIDKSAIELEVK 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + +++ S+E + + + LQ+A ++ G + ++ L+A + Sbjct: 68 SEVQKLPTASHVSKE--NISLSRTLVESLQKAEGLMKQKGDSYLSVDTWLLANIENEP-- 123 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 L+K LD++ F + ++ G + + + E +E + NL +L Sbjct: 124 ----LKKILGKYLDLLAFKKNL-------EALRGGKKIDKQSADENLESLEKYGINLTKL 172 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP+IGR++E++R +Q+L R+ KNNP+L+GE G GKTAIAEGLA RI DVP Sbjct: 173 ASEGKLDPVIGRDEEIQRMMQILIRKTKNNPILIGEPGTGKTAIAEGLALRIAHNDVPLS 232 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + ++ +LD+ +L+AG KYRG+FE R KA++ ++++ N ILFIDEIHTI+GAGA+ G Sbjct: 233 LQNKSVVALDMSALIAGAKYRGEFEDRLKAVIDEVKKSGNVILFIDEIHTIVGAGASE-G 291 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G++ IG+TT +E+ FEKD AL RRFQ + + EPSI E +QI+ Sbjct: 292 SMDAANILKPALARGELHTIGATTLREYRKYFEKDAALQRRFQPVTVNEPSINEALQILR 351 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+K EAHH+V A+ AA +L+ +YI+DR LPDKAID+IDEA A ++ S+ + Sbjct: 352 GIKEHLEAHHNVSIQDSALIAAAKLSSRYISDRFLPDKAIDLIDEAAAELKMQIESEPTE 411 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLG------DRLKMLVFGQDKAIEALTEA 473 + S + ++ + + L + + Q + + + Sbjct: 412 LSRIKRAISTLMVEKEALLMEKNKKNDERLSAIEKELGDAKEKMRSLETQFENEKQVFND 471 Query: 474 IKMARAGLGHEHK 486 I ++ + Sbjct: 472 IAAIKSQAEALRR 484 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 206/803 (25%), Positives = 357/803 (44%), Gaps = 96/803 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL------EACSVDLVALR 55 L++ L SL A ++ +++V+ LLA + N ++ L A +L ALR Sbjct: 86 LSRTLVESLQKAEGLMKQKGDSYLSVDTWLLANIENEPLKKILGKYLDLLAFKKNLEALR 145 Query: 56 --------------QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS--- 98 + LE + T + + + QR++Q + +++ Sbjct: 146 GGKKIDKQSADENLESLEKYGINLTKLASEGKLDPVIGRDEEIQRMMQILIRKTKNNPIL 205 Query: 99 ------GRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSD 152 G+ + + + I L+ V LD+ I+ G + + Sbjct: 206 IGEPGTGKTAIA-EGLALRIAHNDV---PLSLQNKSVVALDMSALIA-GAKYRGEFEDRL 260 Query: 153 PGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREK-----ELERAIQVLCRRRK 207 ++ ++ T + A G +D + EL R + Sbjct: 261 KAVIDEVKKSGNVILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLREYR 320 Query: 208 N------------NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 255 P+ V E + + A +I++G + E + S+ +L+A Sbjct: 321 KYFEKDAALQRRFQPVTVNEPSINE-------ALQILRG-IKEHLEAHHNVSIQDSALIA 372 Query: 256 GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGK 315 K + +I IDE + S P S Sbjct: 373 AAK-------LSSRYISDRFLPDKAIDLIDEAAAELKMQIESE----------PTELSRI 415 Query: 316 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD----V 371 R I + ++ + + EK++ R I+ +E ++ + + + + Sbjct: 416 KRAISTLMVEKEALLMEKNKKNDERLSAIEKELGDAKEKMRSLETQFENEKQVFNDIAAI 475 Query: 372 RYTAKAVRAAVELAVKYINDRHLPDKA---------IDVIDEAGARARLMPVSKRKKTVN 422 + A+A+R E+A K + + + + + K +V+ Sbjct: 476 KSQAEALRREAEIAKKQSEFNKAAEIEYGKLPELLKKEEELKLKWEKMVESGTLLKNSVD 535 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 I ++V++ IP + QS++ + ++ + LK V GQD AI+A+ AIK +AGL Sbjct: 536 EEMIATIVSKWTGIPVNKMLQSEKAKVLHVEEYLKKEVVGQDAAIKAIGRAIKRNKAGLS 595 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPG 539 ++KP+GSFLF GPTGVGKT+ L+ L L+RFDMSEYME+H+VSRL+GAPPG Sbjct: 596 EQNKPIGSFLFLGPTGVGKTQSAKALANFLFDTTKALIRFDMSEYMEKHSVSRLVGAPPG 655 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+D+GG LT+AV + P++V+L DEIEKAHPDVFNILLQV+D G LTDN G DF+N Sbjct: 656 YVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDEGRLTDNKGVTVDFKNT 715 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 ++++T+N + + + + M+E++ F PEF NRLD+II F+ LS D + Sbjct: 716 IIILTSNIASSKIME----FEGEKRTEEVMKELRMHFKPEFLNRLDDIIIFNPLSEDGLR 771 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719 ++V +++ +L K + E++ A++ +AE G+D GARP+ R + + ++ LA Sbjct: 772 EIVTIMFGDIEKKLAHKEIKAELTTTAKSLIAEAGFDPVYGARPLKRALYELVEDKLAEL 831 Query: 720 LLFGSLVDGGQVTVALDKEKNEL 742 +L L +G + + + K + Sbjct: 832 ILEDKLHEGEGIVIDAENGKIVI 854 >UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 Tax=Campylobacterales RepID=C3XDZ0_9HELI Length = 898 Score = 364 bits (934), Expect = 7e-99, Method: Composition-based stats. Identities = 176/546 (32%), Positives = 291/546 (53%), Gaps = 34/546 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L ++ LN A A H++ H LLA+L++ + +AL+ + ++ AL Q L Sbjct: 7 LTNQMREILNNAAQFAITHKNNETQPIHTLLAMLADSNMLLYQALQKNNENINALIQNLT 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I++ V ++ ++ + S Q LQ A+ + G + + + + A +S Sbjct: 67 LEIDKLPKV--SNANTQNMSLSKSLQEALQNALSFATTQGDSFIGVGSFVRANL---DSH 121 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 LL+ + +L+++N + + + G + +S+ E ++ + NL++L Sbjct: 122 FKDLLKN--IDKLELINTLKNMRK----------GMKIDSQSSDDTLETLDKYGINLSKL 169 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A ++P+IGR +E+ER +Q+L R+ KNNP+L+GE GVGKTA+ EGLA +I + +VP Sbjct: 170 AAQNKLNPVIGRNEEIERMMQILIRKTKNNPILLGEPGVGKTAVVEGLAIKIAKKEVPLS 229 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + + +LD+ +L+AG KYRGDFE+R KA++ +++ + ILFIDEIHTI+GAGA+ GG Sbjct: 230 LQNKQVIALDMTALMAGAKYRGDFEERLKAVVDEVKNNDEIILFIDEIHTIVGAGASEGG 289 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G++R IG+TT +E+ FEKD ALARRFQ ++I EPS E +QI+ Sbjct: 290 -MDAANILKPALARGELRTIGATTLKEYRKYFEKDAALARRFQPVNINEPSQNEALQIMR 348 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+K EAHH+V T A+ +V+L+ +YI +R+LPDKAID+IDEA A ++ S+ K Sbjct: 349 GIKESLEAHHNVSITDGALVESVKLSSRYITNRYLPDKAIDLIDEAAAELKMQIESEPKA 408 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK---MLVFGQDKA---------- 466 + ++ L+ + L + G A Sbjct: 409 IAKAKRDIEALEVEKVALNLDKNEQHNTRLQEIEKELIDSKEKLSGLQSAFENEKAIFSD 468 Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYME 526 I + I+ R + G + AG GK K L + S + Sbjct: 469 IAKVKNDIESLRRESEIARR-SGDYARAGEIEHGKIPNAQAELKNLEAKWQDLQKSGSLL 527 Query: 527 RHTVSR 532 +H V++ Sbjct: 528 KHAVTK 533 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 138/476 (28%), Positives = 238/476 (50%), Gaps = 54/476 (11%) Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN----GLKPKYEAHHDVR 372 R I + ++ + +K+ R Q+I+ +E + + K + V+ Sbjct: 414 RDIEALEVEKVALNLDKNEQHNTRLQEIEKELIDSKEKLSGLQSAFENEKAIFSDIAKVK 473 Query: 373 YTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT---------VNV 423 +++R E+A + + + I A A + + + V Sbjct: 474 NDIESLRRESEIARRSGDYARAGEIEHGKIPNAQAELKNLEAKWQDLQKSGSLLKHAVTK 533 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 I +V+R +IP + +S++ + ++ + LK V GQ+KAIE++ AIK +AGL Sbjct: 534 ESIAEIVSRWTQIPVGKMLESEKHRILHIEENLKASVIGQNKAIESIARAIKRNKAGLND 593 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGY 540 ++P+ SFLF G +GVGKT+ L+K L EL+R DMSEYM+ ++L GA PGY Sbjct: 594 ANRPIASFLFLGSSGVGKTQSAKALAKFLFDSEKELVRLDMSEYMQEIDATKLTGAAPGY 653 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+++GG+LT+A+ + P++V+L DE+EKAHP VFN+LLQV+D+G L+DN G DF+N + Sbjct: 654 VGYEEGGILTEAIKRKPYSVVLFDEVEKAHPKVFNVLLQVLDDGRLSDNKGVVVDFKNTI 713 Query: 601 LVMTTNAGVR--------------------------------------ETERKSIGLIHQ 622 +++T+N G E + Sbjct: 714 IILTSNIGSEFICEDSKEVAMKRDDIAALQKAIKEGNIESREKLEREKEILNSLVEAQRA 773 Query: 623 DNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV 682 +E+KK F PEF NRLD+ I F+ LS D I ++D ++ ++L + ++L + Sbjct: 774 SQMEKIEQELKKFFRPEFLNRLDDKIIFNALSRDDIRNIIDILTQQVALKLKDRNITLVL 833 Query: 683 SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 + +++LA+ G+D GARP+ R +Q ++ LA+ +L L + +V + + Sbjct: 834 TDSMKDYLADSGFDPVFGARPLKRAVQREIEDRLADLILNEELSEQSKVIFDIVEN 889 >UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVK9_9DELT Length = 873 Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 169/495 (34%), Positives = 260/495 (52%), Gaps = 23/495 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 N + + + + A + H+ +T HL+ +LL+ AL+ DL L + Sbjct: 6 FNLKSQELIESSSRLAVKKEHQHVTPWHLMSSLLNIGKNPTLTALQESGADLDKLGGRVS 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + L ++++ + +R+ A + + + ++L+A QE Sbjct: 66 TSLLAQPKALASAQQT---PISRDLERLFINAQEIAEKAEEKYIGINHILLAALEIQELA 122 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A L + R + + D P Q PG E + +T +L + Sbjct: 123 GA--LEEAGADREKLTLALQQVRSVDGPGQGKAPG---------DDFEYLAQYTKDLTES 171 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGRE+E+ A Q+L RR KNNP+++GE GVGKTA+ EGLA RIV GDVPE Sbjct: 172 ARQGELDPVIGREEEIRMASQILSRRLKNNPIIIGEPGVGKTAVVEGLAQRIVNGDVPES 231 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + D +I +LD+G L+AG KYRG+FE+RFK +L+++ N I FIDEIH ++GAG + G Sbjct: 232 LQDVSILALDLGQLIAGAKYRGEFEERFKRVLQEITDAGNIITFIDEIHMLVGAGGSE-G 290 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAANLIKP LS G IR +G+TT +E+ EKD AL RRFQ + + EP ++T+ I+ Sbjct: 291 TMDAANLIKPALSRGDIRCVGATTSEEYRKHIEKDSALMRRFQTVTVEEPDHDKTLAILR 350 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+K KYE HH + + ++ A+ +L+ +YI+DR LPDKAID++D+AGA R+ SK + Sbjct: 351 GIKGKYETHHGIHISDSSLGASAKLSQRYISDRFLPDKAIDLMDQAGAALRISLASKPED 410 Query: 420 TVNVADIESVVARIARI---PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIE---ALTEA 473 + + A +S + ++N LK +A E E Sbjct: 411 IDKIDQQIVELEIEAGALQGETDRLSMQRLEVVQNTLADLKEQSRTMTEAWEQQKEAAET 470 Query: 474 IKMARAGLGHEHKPV 488 + AR L K + Sbjct: 471 LAKARKTLDDAKKEL 485 Score = 338 bits (867), Expect = 4e-91, Method: Composition-based stats. Identities = 142/410 (34%), Positives = 234/410 (57%), Gaps = 10/410 (2%) Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 ET+ + + + + EL K I P+ + + A Sbjct: 468 AETLAKARKTLDDAKKELEQKVRQEDFSRVAELQYKII-----PEAEQVLAEYENFDADQ 522 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 P + + + DI + V+R IP + + +++ L D L+ V GQD+ +E ++ Sbjct: 523 EPENGSPRALLPQDIAACVSRWTGIPVSKLMEEEKERWLQLEDYLRKRVVGQDQVLETIS 582 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERH 528 +A++ +RAG+ ++P+GSFL GPTGVGKTE+ L++ L + L+R DMSE+ME+H Sbjct: 583 KAVRRSRAGVQDPNRPLGSFLMLGPTGVGKTEMAKALAEFLFDDERSLVRIDMSEFMEKH 642 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 +V+RL GAPPGYVG+++GG+LT+ + + P++V+L DE+EKAHPD FN+ LQV+D+G LTD Sbjct: 643 SVARLTGAPPGYVGYEEGGVLTNKIRRRPYSVVLFDEVEKAHPDAFNLFLQVLDDGRLTD 702 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNII 648 GR F N V++MT+N G E Q + M+ ++ F PEF NRLD+I+ Sbjct: 703 GQGRTTHFYNTVILMTSNLGAETIEPAETEEEVQKMRSTLMDVVRGFFRPEFLNRLDDIL 762 Query: 649 WFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI 708 + L+ +V+ +VD + L L +G+ +++S EA++ LA+ G++ GARP+ R I Sbjct: 763 ICNPLTPEVMPPIVDIQLKRLNKLLADRGIEMDISDEAKHLLAQDGFNPLYGARPLKRAI 822 Query: 709 QDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 Q +L+ PLA L+ + +GG + V + E LT + +Q + ++A Sbjct: 823 QTSLQDPLAEMLIKEGMDEGGSINVDV--EDGRLTIRKEESQHEEPDSAE 870 >UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERL7_AMOA5 Length = 573 Score = 361 bits (927), Expect = 5e-98, Method: Composition-based stats. Identities = 157/477 (32%), Positives = 259/477 (54%), Gaps = 20/477 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 L + + + ++ A + + H+LL +L + A + L A + + LR LE Sbjct: 5 LTHKAKEIIALSRKEALKLHSNSIRPLHILLGILQYESCLAYKILFALGIPMEELRIALE 64 Query: 60 -AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + ++ + + + + T + +L+ + ++ + ++L+A + Sbjct: 65 KSEQQEHEEDMIDNGQVNGIKLTHEIESLLKLTQQYAKALKSEAIGTEHILLAALKNADV 124 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG------------- 165 Y+L + V+ + I H + S+ ++ E Sbjct: 125 HTKYILDQFNVTYEAIERVIVHRLGQYYIVAQEMEESRDDASENMDDSEDSTTSKHKDIE 184 Query: 166 ---EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTA 222 ++NF+ +L++LA G +DP+IGR+KE+ER Q+L RRRKNN LL+GE GVGKTA Sbjct: 185 KTRTPILDNFSRDLSKLAEEGKLDPIIGRKKEIERVAQILSRRRKNNALLIGEPGVGKTA 244 Query: 223 IAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL 282 IAEGLA +I+QG V + + + SLD+ +L+AGTKYRG FE+R KA++ +L + IL Sbjct: 245 IAEGLALQIMQGKVAKPLLGKRVVSLDVAALVAGTKYRGQFEERIKAIMNELVKSKQVIL 304 Query: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342 FIDE+HTI+GAG+A+ G +DAAN++KP L+ G I+ IG+TT E+ EKD AL RRFQ Sbjct: 305 FIDELHTIVGAGSAA-GSLDAANILKPALARGDIQCIGATTLSEYRQYIEKDGALTRRFQ 363 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI 402 + + +I E+++I+N LK YE +H V YT + ++A V+LA +YI++R LPDKAIDV+ Sbjct: 364 SVRVEPTTIVESIEILNNLKDTYEEYHSVTYTPEVIKACVDLADRYISNRLLPDKAIDVM 423 Query: 403 DEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 DE GA + + K +AD ++ ++ + L++ +L Sbjct: 424 DEVGASVHMHNIQVPSKIAKLADNIELIKANKNKAVRNQKYEEAAQLRDQEKKLYEK 480 >UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=Proteobacteria RepID=B6R3N5_9RHOB Length = 901 Score = 361 bits (926), Expect = 6e-98, Method: Composition-based stats. Identities = 161/484 (33%), Positives = 250/484 (51%), Gaps = 17/484 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 LN ++ A + + H+ +T+EH L++L S P R +++ +VD+ L + Sbjct: 13 LNPCCRQAVEEAASLCVSNSHQEVTIEHFLISLASQPAVDFRLLIQSQNVDVDVLNEAFR 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQES 118 A + V E +R + Q +LQ A G+ V VL+A+ +++ Sbjct: 73 ATFNRYRRV----EADRTPTFSPLLQDLLQDAWLIASVEQGKKTVRSGAVLIALLNDRGR 128 Query: 119 Q----AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEE-RMENFT 173 LL + VS ++ T + E + + Sbjct: 129 YMQMDYYPLLER--VSSDTLLRQFDELTAGSFEKDHRAGQGAGGAASAGDTAEGFLHKYG 186 Query: 174 TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 TN QLA+ G IDP+ R+ E+ + I++LCRRRKNNP+ VGE+GVGKTA+AEGLA RI Sbjct: 187 TNFTQLAKDGKIDPIFCRDNEIRQIIEILCRRRKNNPICVGEAGVGKTALAEGLALRIAN 246 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIG 292 G+VPE A+ ++ LD+G+L AG +G+FEKR K ++ ++ ILFIDE HT+IG Sbjct: 247 GEVPEDFANVALWGLDVGALQAGASMKGEFEKRLKGVIDEVRSSAEPIILFIDEAHTLIG 306 Query: 293 AGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIE 352 AG GG DAANL+KP L+ G+++ I +TT+ E+ FEKD AL RRFQ + + EP+I+ Sbjct: 307 AGGDQGGS-DAANLLKPALARGELKTIAATTWTEYKKYFEKDPALTRRFQLVKLDEPTID 365 Query: 353 ETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM 412 E + I+ GLK YE H V T +A+ A+V LA +YI R LPDKAIDV+D A AR R Sbjct: 366 EAIIIMRGLKKAYEEAHGVYITEEAIGASVRLAARYITGRQLPDKAIDVLDTACARVRAG 425 Query: 413 PVSKRKKTVNVADIESVVARI-ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 + + +V ++ + ++ + + ++ + L+ Sbjct: 426 ANTPPVELQDVEQSLQTLSWEREGLERDQLTAPLEPEQLERLKAIADQINDLEERKQELS 485 Query: 472 EAIK 475 ++ Sbjct: 486 SRLE 489 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 125/439 (28%), Positives = 208/439 (47%), Gaps = 20/439 (4%) Query: 333 KDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY---- 388 + R + I +EE Q ++ V + A +L K Sbjct: 459 LEPEQLERLKAIADQINDLEERKQELSSRLEA-----QVALAENFIAAREDLFQKQPETQ 513 Query: 389 INDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDT 448 D D+A+ V + V A+I ++++ IP S+ Q D Sbjct: 514 EEDALEQDRALLVSHKNALIEEAGSEPLISVEVGSAEIAAIISDWTGIPVNSMVQDDYHR 573 Query: 449 LKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL 508 L L + +K + GQD AI+A+ ++ +R L + +P+G F AGP+GVGKTE +++ Sbjct: 574 LLTLAETMKKAIKGQDHAIDAIEARLRASRLDLHKKGQPLGVFFLAGPSGVGKTETALEV 633 Query: 509 SKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDE 565 S+ L + +MSEY ERHTVSRLIG+PPGYVG+ +GG+LT+A+ K P++V+LLDE Sbjct: 634 SRRLFGGEEFITTINMSEYQERHTVSRLIGSPPGYVGYGEGGVLTEAIRKKPYSVVLLDE 693 Query: 566 IEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG------L 619 +EKA P+V N+ Q D G L D GR D RNVV +T+N G + E Sbjct: 694 VEKADPNVLNLFYQAFDKGELADGEGRLIDCRNVVFFLTSNLGSDQIENWVANAEDDQVP 753 Query: 620 IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGV 678 H + F P R++ ++ + LS +V+ +V + +L L + + + Sbjct: 754 SHGSMLKSLTPLFAQHFKPALLARMEPLV-YMPLSEEVLADIVQMRLDDLIELLKETQKI 812 Query: 679 SLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 +L +++ + + + GAR + +VIQ L L+ E+L ++ +D Sbjct: 813 ALTITEATYGRVTQMCRVASNGARLVDQVIQRQLLPTLSIEILEAGHRGEHIASITIDSP 872 Query: 739 KNELTYGFQSAQKHKAEAA 757 +++ + F + + A A Sbjct: 873 EDDGGFSFSAVFQEDAVAE 891 >UniRef50_A6GDL5 ClpA/B family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDL5_9DELT Length = 1221 Score = 361 bits (925), Expect = 8e-98, Method: Composition-based stats. Identities = 174/695 (25%), Positives = 284/695 (40%), Gaps = 64/695 (9%) Query: 90 RAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQ 149 A + R ++ I + +L +S D + + G Sbjct: 128 DADEDQSEAQRAAALDEHLRGVIARD----IERVLAARSLSSYDYLQLLRGGNPYSLERL 183 Query: 150 SSDPGSQPNSEEQA---------------GGEERMENFTTNLNQLARVGGIDPLIGREKE 194 + + S+ +A + + + T++ R P++ RE+E Sbjct: 184 RVELEREEQSDPKARAQARRRRARDRSQAEARKLLSSVGTSVLAEVRRRRTVPILHRERE 243 Query: 195 LERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL 254 + +L + LVG GKTA+ GLA R ++ + P I L+ Sbjct: 244 IASLDALLRGPERLALALVGPELSGKTAVVLGLAQRWLELERPARERLPVIVQTSGAQLV 303 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314 AG G E+R + ++ E +++L+ D + + + G D A I+P + G Sbjct: 304 AGQSGFGQLEQRVQDVMAAAEAL-DAVLYFDNLADLFARTSGELG--DVAASIRPWIERG 360 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT 374 ++R++G T + + ++ ++ + +T I+ + R T Sbjct: 361 RVRLLGELTPERLEHHEKRHVGFFSVLNRLPVHALDAPQTRAILEAQARYDRRYEPKRPT 420 Query: 375 A------------------KAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 A + V+LA +Y + + P KA+ A ++ Sbjct: 421 LTLGPASPSASARMGRGKGGAAQPLVDLAERYFSYQAFPGKAMRFYQSLRATQETELDAE 480 Query: 417 RKK-TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIK 475 K ++ + + + IP + + + + V GQ AI+ + E + Sbjct: 481 GKPRPISPDVVYKGFSLHSGIPMFLLREDRGLEFARVVEYFGARVIGQRAAIDRVAETLC 540 Query: 476 MARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSR 532 +AGL KP+ +FLF GPTGVGKTEV L++ L + RFDMSEYM+ R Sbjct: 541 TVKAGLQPAAKPLATFLFVGPTGVGKTEVAKTLARFLFGSPERMTRFDMSEYMDPLAADR 600 Query: 533 LIGAPPGYVGFD-QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 LI G D + G+LT V + P VLLLDE+EKAHP VF++LLQV G L+D G Sbjct: 601 LI------RGTDREDGVLTRRVRQQPFCVLLLDEVEKAHPAVFDLLLQVCGEGRLSDARG 654 Query: 592 RKADFRNVVLVMTTNAGVRET----------ERKSIGLIHQDNSTDAMEEIKKIFTPEFR 641 R F N +++MT+N G + +E++ F PEF Sbjct: 655 RTTWFHNAIIIMTSNLGAAHRRPQSGFGGGSSDADPKRAEAEAERYYLEQVDTHFRPEFV 714 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAM 699 NR+D II F L I V + ++ + L ++GVSLE+ LAE+GY Sbjct: 715 NRIDRIIPFHPLDRAQIQAVARVSLTSVREREGLAERGVSLELEDGTLARLAEQGYSSTY 774 Query: 700 GARPMARVIQDNLKKPLANELLF-GSLVDGGQVTV 733 GAR + RV++D L P+A L G G V V Sbjct: 775 GARALRRVLEDRLVAPMARTLARLGGQGQGASVWV 809 >UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=CLPB_HELPJ Length = 856 Score = 360 bits (923), Expect = 1e-97, Method: Composition-based stats. Identities = 167/493 (33%), Positives = 270/493 (54%), Gaps = 26/493 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 + +L +L+ A A A H++ +T H+L A+L+N +AL+ VD+ AL+ ++ Sbjct: 7 MTDQLHETLDSAIALALHHKNAEVTPMHMLFAMLNNSQGILIQALQKMPVDIEALKLSVQ 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + + V S++ + Q + + L+ A + G + + L+A + ES Sbjct: 67 SELNKFAKVSQISKQ--NIQLNQALIQSLENAQGLMAKRGDSFIATDAYLLANMNLFESV 124 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 L E+ + +S G + E +E F +L Q Sbjct: 125 LKPYLDTKELQKT---------------LESLRKGRTIQDKNDDSNLESLEKFGIDLTQK 169 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A +DP+IGR++E+ R +Q+L R+ KNNP+L+GE GVGKTA+ EGLA RIV +VP+ Sbjct: 170 ALENKLDPVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKT 229 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + + + +LD+ L+AG KYRG+FE+R K +++++++ N ILFIDEIHTI+GAGA+ GG Sbjct: 230 LLNKRVVALDLSLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGG 289 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAAN++KP L+ G++ IG+TT +E+ FEKD AL RRFQ I + EPSI E +QI+ Sbjct: 290 -MDAANILKPALARGELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILR 348 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLK E HH++ A+ A+ +L+ +YI DR LPDKAID+IDE A+ ++ S+ K Sbjct: 349 GLKETLETHHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKMQMESEPAK 408 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDT----LKNLGDRLKMLV--FGQDKAIEALTEA 473 +V + + E +S+ LK L D + + Q + + + + Sbjct: 409 LSSVKRSIQRLEMEKQALEMENKESNHKRMQEILKELSDLKEEKIQLEAQFENEKEVFKE 468 Query: 474 IKMARAGLGHEHK 486 I + + K Sbjct: 469 ISRLKMEMEGLKK 481 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 201/803 (25%), Positives = 355/803 (44%), Gaps = 88/803 (10%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLA-----------LLSNPSAREALEACSV- 49 LNQ L SL A + F+ + LLA L ++ LE+ Sbjct: 85 LNQALIQSLENAQGLMAKRGDSFIATDAYLLANMNLFESVLKPYLDTKELQKTLESLRKG 144 Query: 50 ----------DLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSG 99 +L +L + ++ RD + Q ++++ + G Sbjct: 145 RTIQDKNDDSNLESLEKFGIDLTQKALENKLDPVIGRDEEIIRMMQILIRKTKNNPILLG 204 Query: 100 RNEVTGANVLVAIFSEQESQ-AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPN 158 V V+ + ++ L V LD+ + + G + + Sbjct: 205 EPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVVALDL-SLLVAGAKYRGEFEERLKKVIEE 263 Query: 159 SEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER-----------------AIQV 201 ++ A ++ T + A GG+D + L R + Sbjct: 264 VKKSANVILFIDEIHTIVGAGASEGGMDAANILKPALARGELHTIGATTLKEYRKYFEKD 323 Query: 202 LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG 261 + +R+ P+L+ E + + A +I++G + E + +++ +L+A K Sbjct: 324 MALQRRFQPILLNEPSINE-------ALQILRG-LKETLETHHNITINDSALIASAK--- 372 Query: 262 DFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGS 321 + +I IDE Q+ +P S R I Sbjct: 373 ----LSSRYITDRFLPDKAIDLIDE----------GAAQLKMQMESEPAKLSSVKRSIQR 418 Query: 322 TTYQEFSNIFEKDRALARRFQKIDITEPS--IEETVQI---INGLKPKYEAHHDVRYTAK 376 ++ + E + +R Q+I + E S EE +Q+ K ++ ++ + Sbjct: 419 LEMEKQALEMENKESNHKRMQEI-LKELSDLKEEKIQLEAQFENEKEVFKEISRLKMEME 477 Query: 377 AVRAAVELAVK---YINDRHLPDKAIDVIDEAGARARLMPVSKRKK------TVNVADIE 427 ++ E + Y + I ++ + + ++ + +I Sbjct: 478 GLKKEAERFKRNGDYQQAAEIEYSKIPEKEKKEKELQHKWETMQQNGALLQNALTENNIA 537 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 +V++ IP + + QS+++ + N+ L+ V GQ+KA++A+ +AIK +AGL +KP Sbjct: 538 EIVSQWTHIPVQKMLQSEKNRVLNIESELQKRVVGQEKALKAIAKAIKRNKAGLSDSNKP 597 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 +GSFLF GPTGVGKTE L++ L L+R DMSEYME+H +SRLIGA PGYVG++ Sbjct: 598 IGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEKHAISRLIGAAPGYVGYE 657 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 +GG LT+AV + P++V+LLDE+EKAHPDVFN+LLQV+D G LTD+ G + DF+N +L++T Sbjct: 658 EGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILT 717 Query: 605 TNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 +N + + D E +++ F PEF NRLD II F+ L + I +V Sbjct: 718 SNVASGALLEEDL--SEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAIINIVGI 775 Query: 665 FIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 +Q + ++G+++ + ++A+ +AE G+DR GARP+ R + + ++ LA +L Sbjct: 776 LFENVQKKALERGINITLDEKAKELIAEAGFDRFYGARPLKRALYEMVEDKLAELILEDK 835 Query: 725 LVDGGQVTVALDKEKNELTYGFQ 747 + + VA E NE+ + Sbjct: 836 IKENDS--VAFVVENNEIVPKIK 856 >UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria RepID=A7ZQR5_ECO24 Length = 881 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 161/585 (27%), Positives = 265/585 (45%), Gaps = 39/585 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE--ALEACSVDLVALRQELE 59 LN +L+ A + + H +T+EH LL LL D+ L Q L Sbjct: 13 LNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRYEWDIDTLWQSLL 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRN-EVTGANVLVAIFSEQES 118 A ++ + Q + ++++A G + ++ ++L+A+ + Sbjct: 73 AHLDTLPRSVR-----ERPQLSEPLTALIRQAWLIASLEGDDPQIRSQHLLMALTEKPML 127 Query: 119 QA----AYLLRKHEVSRLDVVNFISHGTRKDEPTQ----------------SSDPGSQPN 158 A LL V + + + + Q + P + Sbjct: 128 PACNDLWVLLSLSRVQFERLRPLLDAQSDECPARQPQVTEPLTSAQPGVATTDAPANTLT 187 Query: 159 SEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV 218 ++ + FT ++ + AR G IDP+ GR+ E+ + + +L RRRKNNP+LVGE GV Sbjct: 188 GKQDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPILVGEPGV 247 Query: 219 GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT 278 GKTA+ EGLA RI +G+VP+ + I +LD+G L AG +G+FE+R K ++ +++ Sbjct: 248 GKTALVEGLALRIAEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSP 307 Query: 279 -NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRAL 337 +LFIDE HTIIGAG +GG DAANL+KP L+ G++R I +TT+ E+ FE+D AL Sbjct: 308 EPVLLFIDEAHTIIGAGNQAGG-ADAANLLKPALARGELRTIAATTWSEYKQYFERDAAL 366 Query: 338 ARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDK 397 RRFQ + + EP + ++ GLK +Y HH V A++ AV L+ +Y+ R LPDK Sbjct: 367 ERRFQMVKVDEPDDDTACLMLRGLKARYAQHHGVHMLDSAIQTAVRLSRRYLTGRQLPDK 426 Query: 398 AIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 A+D++D AGAR R+ + + + + + E+ + + L + + Sbjct: 427 AVDLLDTAGARVRMSLDTLPEPLTQLHARLAALDIEREAIEQDSVFYPEASPERLAELID 486 Query: 458 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL-SKALGIEL 516 + Q +A E + + G TE+ QL + L Sbjct: 487 LRDELQAEA--------GHLETQYQQEKRLAQQIMTLRQEGTDSTELQQQLRTHQGFAPL 538 Query: 517 LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVL 561 L D+ V+ G P + D+ L + V+ Sbjct: 539 LALDVDARAVATVVADWTGIPLSSLLRDEQSDLLSMEQSLENRVV 583 Score = 247 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 114/399 (28%), Positives = 191/399 (47%), Gaps = 19/399 (4%) Query: 371 VRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK--------TVN 422 + + A L +Y ++ L + + + E L + + V+ Sbjct: 485 IDLRDELQAEAGHLETQYQQEKRLAQQIMTLRQEGTDSTELQQQLRTHQGFAPLLALDVD 544 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 + +VVA IP S+ + ++ L ++ L+ V GQ A+ A+ + ++ A+ GL Sbjct: 545 ARAVATVVADWTGIPLSSLLRDEQSDLLSMEQSLENRVVGQSPALCAIAQRLRAAKTGLT 604 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPG 539 E+ P G FL GP+G GKTE + L+ L L+ ++SEY E HTVS+L GAPPG Sbjct: 605 PENGPQGVFLLTGPSGTGKTETALTLADTLFGGEKSLITINLSEYQEPHTVSQLKGAPPG 664 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG+ QGG+LT+AV K P++V+LLDE+EKAH DV N+ QV D G + D GR+ DFRN Sbjct: 665 YVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREIDFRNT 724 Query: 600 VLVMTTNAGVRETE---RKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 V++MT N G + D +++ F P R +I + L + Sbjct: 725 VILMTANLGSDHIMQLLEEKPDATDADLHELLYPLLREHFQPALMARFQTVI-YRPLGQE 783 Query: 657 VIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 + +V+ + ++ +L Q G+ E++ + L GAR + ++ + Sbjct: 784 AMRAIVEMKLAQVVRRLRQHYGLETEINDSLYDALTAACLLPDTGARNIDSLLNQQILPV 843 Query: 716 LANELLFGS--LVDGGQVTVALDKEKNELTYGFQSAQKH 752 L+ +LL Q+ + D E++ + F + + Sbjct: 844 LSQQLLAQQAAHRKPAQLRLGWD-EEDGIVLEFATEEMQ 881 >UniRef50_Q03X61 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=2 Tax=Leuconostoc mesenteroides RepID=Q03X61_LEUMM Length = 632 Score = 359 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 184/609 (30%), Positives = 295/609 (48%), Gaps = 60/609 (9%) Query: 161 EQAGGEERMENFTTNLNQLARVG-GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 +Q ++ +TT+++ RE R + L ++ +N PLLVG GVG Sbjct: 5 KQNNTTPYLDRYTTDISAKVMSAPEKYHAYERESITRRIMVSLMKQIQNAPLLVGLPGVG 64 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN 279 KTAI E LA +++ V + + + + +L+ + F +F+A++ +L + + Sbjct: 65 KTAIVEDLARQLLSTSV-SSLKGKHLVQISLANLMKSSDGE-SFAHKFQAIIDELIANKD 122 Query: 280 -SILFIDEIHTIIGAG-AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRAL 337 I FIDEIH I+G G SG +DA N+IKP LS +++IG+TT +EF +D AL Sbjct: 123 TVIAFIDEIHQIVGTGAETSGSSLDAGNIIKPALSRDDLQIIGATTTKEFHEYVARDGAL 182 Query: 338 ARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDK 397 RRF I++ E S E+T +++ + + ++ + + L+ +YI DR+ P+K Sbjct: 183 MRRFDLIEVPELSFEQTKNVLSKVA--LQLNNGIEVPETVQDRIMALSQRYITDRYFPEK 240 Query: 398 AIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 AI ++D A + ARL + T++ D+ +++ +PE ++Q+ + L NL RLK Sbjct: 241 AIMLLDGALSVARLDN----RPTLSNQDVATIIHDDYHVPEYVINQTTDERLLNLLPRLK 296 Query: 458 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE-- 515 V GQD A+E + + AGL KP SFLF GPTGVGKTE QL+ L Sbjct: 297 SQVIGQDTALEKVAMKLTNREAGLADTSKPE-SFLFMGPTGVGKTETAKQLALNLFGNKQ 355 Query: 516 -LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVF 574 +RFDMSE+ G LT V P+AVLLLDEIEKA P+V Sbjct: 356 NFIRFDMSEFK-----------FAGTSLERFKDQLTTRVRHTPYAVLLLDEIEKADPEVM 404 Query: 575 NILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKK 634 ++LLQV+D+G L+D GR +F+++++VMTTN+G + ++ Sbjct: 405 DLLLQVLDDGRLSDEYGRVINFKDLIIVMTTNSGATAVMNRDAKSDAVKEDKKRQANFEE 464 Query: 635 IF---------TPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSL----- 680 PEF R+ II FD L + ++V+ + L + + G ++ Sbjct: 465 QLEIALQSDGYRPEFIARIGAIIVFDVLKMADMVRIVELKLSRLNQKAQESGFNIVFDTQ 524 Query: 681 --------------------EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 EVS N++A+ GY + G RP+ I + P++ + Sbjct: 525 EVARYIPSFDLGFEYLNGTQEVSSPIANYIADVGYKPSRGVRPIDDTIATYVSDPVSAAI 584 Query: 721 LFGSLVDGG 729 + G Sbjct: 585 IQKRQGLGQ 593 >UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 RepID=B7VTU3_VIBSL Length = 897 Score = 358 bits (918), Expect = 5e-97, Method: Composition-based stats. Identities = 155/535 (28%), Positives = 243/535 (45%), Gaps = 18/535 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 L+ ++++L A A A + + +EH LL+LL N L LRQ + Sbjct: 13 LHPIVKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDILLSHFDCSETILRQSIR 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + T + +L + + + + ++ +L+ + S Sbjct: 73 STLNTNT----TGNGSKPVFSSLLIEWLQESWLVSSLDLSETQIRSGALLLTLVSNPLRY 128 Query: 120 AAYLLRK--HEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 + V+ + S T + + + + + FTT+ Sbjct: 129 GQHGYASILEGVNPDTLKRNFSELTTNSLESLA----TTSEKTDAREDGSALSKFTTDFT 184 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 AR G IDP+ R++E+ + I +L RRRKNNP+ VGE GVGKTA+ EGLA +I +GDVP Sbjct: 185 GKARKGEIDPVFCRDQEIRQIIDILARRRKNNPIAVGEPGVGKTAVVEGLALKITEGDVP 244 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGAA 296 + + +Y LD+G L AG +G+FEKR A+L +++ ILFIDE HT++G G Sbjct: 245 DCLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQ 304 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 +GG DAANL+KP L+ G+++ I +TT+ E+ FEKD ALARRFQ + + EPS + Sbjct: 305 AGGS-DAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSASQAAL 363 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 II GL+P YE H+V A+ AA LA +YI R LPDKAIDV+D A AR + + Sbjct: 364 IIRGLRPAYEKSHNVYVRDDAITAAANLADRYITGRQLPDKAIDVLDTACARVNISLNAT 423 Query: 417 RKKTVNVAD-IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIK 475 + I + + + + Q+ L LK + + L K Sbjct: 424 PAPVETLHQEIAAANRELEALERDQLQQTGDKHSAALIPELKEKIEKATEEQATLQVQWK 483 Query: 476 MARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFD---MSEYMER 527 ++ + + + + + L D EY E Sbjct: 484 KEQSLIQEIIELRSHLYSLTTPSTEEDSAPKADNTIQDDDALTSDKPNCHEYSEE 538 Score = 280 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 130/470 (27%), Positives = 210/470 (44%), Gaps = 27/470 (5%) Query: 300 QVDAANLIKPLLSSGKIRVIG----STTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 ++ AAN L +++ G + E EK Q E S+ + + Sbjct: 433 EIAAANRELEALERDQLQQTGDKHSAALIPELKEKIEKATEEQATLQVQWKKEQSLIQEI 492 Query: 356 QIINGLKPKY----------EAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEA 405 + + A+ + +Y + +AI +E Sbjct: 493 IELRSHLYSLTTPSTEEDSAPKADNTIQDDDALTSDKPNCHEYSEE--QTREAIQSCNER 550 Query: 406 GARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDK 465 R V +I V++ IP + Q + NL L + GQ+ Sbjct: 551 LDNVRGTNP-LVHYEVGPDEISHVISDWTGIPMGKMLQDESQATLNLKQNLIQNIKGQEF 609 Query: 466 AIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMS 522 AI+AL E I+ A+AGLG+ P G FL GP+GVGKTE ++ + + +MS Sbjct: 610 AIDALAEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTETARAIADQMFGGERFMTTINMS 669 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 E+ E+HTVSRLIG+PPGYVGF +GG+LT+AV + P++V+LLDE+EKA P+V N+ QV D Sbjct: 670 EFQEKHTVSRLIGSPPGYVGFGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQVFD 729 Query: 583 NGTLTDNNGRKADFRNVVLVMTTNAGVRETER---KSIGLIHQDNSTDAMEEIKKIFTPE 639 GTL D GR DF+N +++MT+N E E ++ + + + + F P Sbjct: 730 KGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQAKDIDANIVAEAIRPTLNQHFKPA 789 Query: 640 FRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRA 698 R+ +++ F LS + ++ + ++ +L ++L ++ Sbjct: 790 LLARM-SVLPFLPLSDAAMTDIIHHKLKKVSERLQSHHKLALCYGDNLVEFVLGNCRLAE 848 Query: 699 MGARPMARVIQDNLKKPLANELLFGSLVDGGQ-VTVALDKEKNELTYGFQ 747 GAR + VI L L+ +LL D + V++D E+ LTY F Sbjct: 849 TGARNIDAVINRQLLPQLSTQLLVNDKDDSHTQIEVSVD-EQGTLTYAFS 897 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 70/197 (35%), Gaps = 40/197 (20%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL--DIGSLL-AGTKYRGDFEKRF 267 LLVG SGVGKT A +A ++ G+ + + + + L+ + Y G E Sbjct: 636 LLVGPSGVGKTETARAIADQMFGGERFMTTINMSEFQEKHTVSRLIGSPPGYVGFGEGGM 695 Query: 268 KALLKQLEQDTNSILFIDE-----------IHTIIGAG---AASGGQVDAAN---LIKPL 310 L + + Q S++ +DE + + G G +D N ++ Sbjct: 696 --LTEAVRQRPYSVVLLDEVEKADPEVLNLFYQVFDKGTLNDGEGRTIDFKNTLIIMTSN 753 Query: 311 LSSGKI------------RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI- 357 L++ +I ++ + F+ AL R + S I Sbjct: 754 LATHEIESLVHQAKDIDANIVAEAIRPTLNQHFK--PALLARMSVLPFLPLSDAAMTDII 811 Query: 358 ---INGLKPKYEAHHDV 371 + + + ++HH + Sbjct: 812 HHKLKKVSERLQSHHKL 828 >UniRef50_A9AVM3 ATPase AAA-2 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AVM3_HERA2 Length = 1027 Score = 357 bits (917), Expect = 7e-97, Method: Composition-based stats. Identities = 158/612 (25%), Positives = 296/612 (48%), Gaps = 19/612 (3%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 G Q E + T +L A + P R+++L Q+L NP+++ Sbjct: 55 GEQRIMVEDEELANLLSRCTIDLRARAERDELRPAFLRDEDLLAVQQLLTSMDHVNPIIL 114 Query: 214 GESGVGKTAIAEGLAWRIVQ--GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALL 271 G++ GKTA+ L R+V+ ++PE + D +Y + SLLAG ++ + L Sbjct: 115 GKARSGKTALVHELVRRLVKTPENMPEKLRDLPMYEMTPASLLAGLQFGEGWRANLSTLF 174 Query: 272 KQLEQDTNSILFIDEIHTIIGAG--AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSN 329 +L + +LFI +IH +GAG D A ++ L +GK+++I + Sbjct: 175 GKLAEHGAVLLFIRDIHAAVGAGVKRGDDDDDDLAAALESNLHNGKLKIIAEARPDRWQA 234 Query: 330 IFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYI 389 I + A F I + P E+ +I+ + ++ ++ T++A A+++A ++I Sbjct: 235 IAADRESFADLFTSIQLAIPKPEQVAEIVQHVAERHRQRANIEATSQA--TAIDIAGRFI 292 Query: 390 NDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTL 449 ++ P KAI++++++ L+ + + V + + + + +++R Sbjct: 293 LNQAFPGKAIELLEDSL----LLAERQHEPEVLPRHVVECFGNRTGLTKLLLDENERFDE 348 Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 L V GQD ++ A+ + + + +A L +P+G + F GPTGVGKTE+ L+ Sbjct: 349 IALRRSFSERVLGQDPSVIAMVQKLALLKARLHDPARPMGVYFFLGPTGVGKTELAKTLA 408 Query: 510 KALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI 566 L +RF+M++Y + ++L G G ++ G LT A+I P AVLLLDE Sbjct: 409 STLFGSEERFVRFNMADYSGEYDFAQLFGRTWGDSDAERRGKLTMALINLPFAVLLLDEF 468 Query: 567 EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQD--- 623 EKAH +FN LQ+ D G L + G + + RN +++MT+N G + ++ G ++ Sbjct: 469 EKAHRSIFNRFLQLFDEGILVNAMGEEINLRNTIIIMTSNFGATIVQGETWGFAAREGIE 528 Query: 624 -NSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSL 680 + E ++ F+PEF NRLD +I+F LS + ++ + + +L + L ++ V + Sbjct: 529 AVERRVLRETEEFFSPEFINRLDGVIFFKPLSQSDMRKIAAREMRKLFEREGLVRRNVQV 588 Query: 681 EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 E+ + L + GY GAR + R I+ + PLA+ LL G + + + +E+ Sbjct: 589 ELDDAVLDILLKHGYSIRYGARYLKRQIEKMVTYPLASALLTRPEQTNGLLRLYVAREQI 648 Query: 741 ELTYGFQSAQKH 752 + ++ + Sbjct: 649 KASWVANDDDEP 660 >UniRef50_Q2SB13 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SB13_HAHCH Length = 754 Score = 357 bits (917), Expect = 7e-97, Method: Composition-based stats. Identities = 157/640 (24%), Positives = 263/640 (41%), Gaps = 51/640 (7%) Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 + L R V + + P + R+ Sbjct: 151 PSEPWLEVVSFDRGKVRPSLQQHNSAAMEYMLTVSDQAPLPKRVKRQVSRLPEVA----- 205 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI----AEGLAWRIVQG 234 R + ++R + L +++ LL+GE GVGK+ + A G Sbjct: 206 ----------WERGEMIQRLAEELL-EGRSSCLLIGEQGVGKSVLWQEPVRVAARLSKSG 254 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 + P T + ++A KY G++++ +++ L Q N +L++++ +++ G Sbjct: 255 EAP-----LTFWRSTPQRIIAKAKYLGEWQEVCDEVVESLAQV-NGVLWLNDFISLLSIG 308 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 G + A ++ L+ G+IR+IG QE K F++I++TE S Sbjct: 309 G-EGQEDSMAAYLRSYLAKGQIRIIGELRPQELEAARNKLPGFLHLFEQINVTELSGRSA 367 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV 414 +++ ++ + A+ +L +YI P + A Sbjct: 368 QRVVQAYANYAASNFAIDTRDDALETVSQLVRRYIKYERAPGNLVRFYHHCVKNA----F 423 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 +++ T+ + + +PE + + + L D K + GQD +E L I Sbjct: 424 EQKQATITRDQVIADFVAYTGLPELFLRDEQALSQQALLDYFKTRIIGQDSILEQLCRVI 483 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG------IELLRFDMSEYMERH 528 ++ +AGL KP+ + LFAGPTGVGKT T L+ L R DMSE+ Sbjct: 484 QIFKAGLNDPQKPIATLLFAGPTGVGKTAATKALADYFFSAGQSKNPLFRLDMSEFQHPG 543 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 + RLIG G + L V +P +V+LLDEIEKA VF+ LL +D G LTD Sbjct: 544 HIERLIG------GEGKPSPLVQHVRANPFSVVLLDEIEKADDSVFDALLSTLDEGLLTD 597 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA-MEEIKKIFTPEFRNRLDNI 647 GR DFRN +++MTTN GV +G + M I+ F PEF NR+D I Sbjct: 598 RFGRTTDFRNTIIIMTTNLGVN--TGGGVGFSATEKRGQVSMSGIRDFFRPEFINRIDAI 655 Query: 648 IWFDHLSTDVIHQVVDKFIVELQ--VQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 + F+ L D I + + + L ++ ++ + L S +AE G+ GARP+ Sbjct: 656 LCFNPLDRDSILSIARRELELLNQRERIREQKLKLSFSDALVAHVAEAGFSELYGARPIQ 715 Query: 706 RVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 R I+ + LA+ L+ + LD + Sbjct: 716 RAIEQRVVAELASYLVTREHTPS---HIHLDAIDGAVVIR 752 >UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TDQ5_9BURK Length = 910 Score = 357 bits (916), Expect = 9e-97, Method: Composition-based stats. Identities = 179/616 (29%), Positives = 274/616 (44%), Gaps = 74/616 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 LN E +L++ A H + VEHLLL LL + P + L +V L +L+ Sbjct: 12 LNPECKLAMEQAAQLCVRQTHYNVDVEHLLLTLLESDAPDLKAILAHFAVKPETLSAQLQ 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS-GRNEVTGANVLVAIFSEQES 118 ++ R + +F + Q A G ++ +++A+ Sbjct: 72 KTVDGF-----KRGNGRTPALSPNFSPLFQEAWLLSSMLLGEQQIRSGTLVLALLEVDTL 126 Query: 119 QAAYLLRK---HEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG---------- 165 + L R + + ++ +SE G Sbjct: 127 RGMLLESAPALLNFPRAALRDRLAAILAGSSEDAGGSHMPGQDSEAAQPGAASASASSAA 186 Query: 166 ------------------EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRK 207 + +E +T ++ LAR G IDP+ GR+ E+ + I VL RRR+ Sbjct: 187 RETGAMPNIAGGAGGSGRKSALELYTVDMTGLAREGKIDPIRGRDAEIRQLIDVLLRRRQ 246 Query: 208 NNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRF 267 NNP+L GE+GVGKTA+ EG A RIVQGDVP + + ++ SLD+ L AG +G+FE R Sbjct: 247 NNPILTGEAGVGKTAVVEGFAQRIVQGDVPPALVNVSVRSLDLALLQAGAGVKGEFENRL 306 Query: 268 KALLKQLEQDT-NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 K+++ +++ ILFIDE H +IGAG + GQ DAANL+KP L+ G++R I +TT+ E Sbjct: 307 KSVIAEVKASPVPVILFIDEAHQLIGAGGSE-GQGDAANLLKPALARGELRTIAATTWAE 365 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + E+D ALARRFQ + + EPS + ++ G+ K E HH V AVR AV+L+ Sbjct: 366 YKKYVERDPALARRFQVVKVEEPSEAVAIDMLRGMVQKLEEHHGVEILDDAVRDAVKLSH 425 Query: 387 KYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKS------ 440 +YI+ R LPDKAI V+D A AR + ++ + R RI Sbjct: 426 RYISGRQLPDKAISVLDTACARVAIGQSGTPEEIEALGRTIEAAERQLRILRHEAATGAD 485 Query: 441 ------VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 V+ D + RL + + +A+E + K R L + Sbjct: 486 RADAIAVTTKQLDDARAQRSRLTDKLATEKRAVEEILAWRKKIRGYLSDPD--------S 537 Query: 495 GPTGVGKTEVTVQLSKALGIELLRFDMSEYM-----ERHTVSRLIGAPPGYVGFDQGGLL 549 G + V LS+ L L E M + TV+++I G+ G G +L Sbjct: 538 AADGEDAASLAVNLSR-LEKGLEAMQNDEPMVPVCVDSETVAQVIS---GWTGIPVGRML 593 Query: 550 TDAVIKHPHAVLLLDE 565 D + H VL L + Sbjct: 594 ADEL----HTVLYLQD 605 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 126/477 (26%), Positives = 209/477 (43%), Gaps = 32/477 (6%) Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 A +++ + I G T +E + A R+ + + + + I Sbjct: 437 AISVLDTACARVAIGQSG--TPEEIEALGRTIEAAERQLRILRHEAATGADRADAIAVTT 494 Query: 363 PKYEAHHDVR--YTAK------AVRAAVELAVKYINDRHLPDKAID-----------VID 403 + + R T K AV + K PD A D Sbjct: 495 KQLDDARAQRSRLTDKLATEKRAVEEILAWRKKIRGYLSDPDSAADGEDAASLAVNLSRL 554 Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 E G A V+ + V++ IP + + T+ L D+L V GQ Sbjct: 555 EKGLEAMQNDEPMVPVCVDSETVAQVISGWTGIPVGRMLADELHTVLYLQDKLAERVVGQ 614 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFD 520 D+A++A+ ++ RA L KPVG FL GP+GVGKTE L+ L ++ + Sbjct: 615 DEALDAIARRVRTFRADLDDPGKPVGVFLLVGPSGVGKTETACALADMLYGGERNMITVN 674 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MSE+ E H+VS L GAPPGYVG+ +GG+LT+AV + P++V+LLDE+EKAHPDV + QV Sbjct: 675 MSEFQEAHSVSGLKGAPPGYVGYGRGGVLTEAVRRRPYSVVLLDEMEKAHPDVLELFFQV 734 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS---TDAMEEIKKIFT 637 D G + D G DF+N ++++T+NA S G + + F+ Sbjct: 735 FDKGVMEDGEGVPIDFKNTLILLTSNAAQDVITEASRGGRRPPPDELIEKLRPALLRQFS 794 Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQEARNWLAEKGYD 696 P F RL + ++ L I+ +V+ + L + ++ L + +A++ + Sbjct: 795 PAFLGRLVLVPYYH-LGDAQINAIVNLKLERLAQRFERNHHAGLTWDDDVATLIAQRCKE 853 Query: 697 RAMGARPMARVIQDNLKKPLANELLFG--SLVDGGQVTVALDKEKNELTYGFQSAQK 751 GAR + ++ ++ LA ++L G V +AL + + F S+++ Sbjct: 854 VDSGARNVDHILTQSVLPELARQVLERISISEPFGGVHLALSPTG-AIEFRFLSSEE 909 >UniRef50_A9GQS7 ATP-dependent Clp protease, ATP-binding subunit , two ATP-binding domains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GQS7_SORC5 Length = 1217 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 152/618 (24%), Positives = 276/618 (44%), Gaps = 33/618 (5%) Query: 144 KDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLC 203 + P + ++ G + + N +L Q A G +D + R + E+ +L Sbjct: 174 PERPGEDDTGADPAFRWKKRRGLKVLPNLGVSLTQRAAQGNLDAGVPRSPQREQLALLLG 233 Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD----CTIYSLDIGSLLAGTKY 259 R ++VG G GKT + ++ D + + ++ L+AG + Sbjct: 234 AGRAQPVVVVGPPGCGKTTLIHRAVLDLLAADGYGAHKNLDRVRDVVAVSGRRLIAGMSH 293 Query: 260 RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVI 319 GD+EKR L++ +IL ID++H G + + A+ + LS +I ++ Sbjct: 294 LGDWEKRCVELVEDARSRG-AILVIDDLHHFGRIGRSRESERSLADFFRGPLSRREIVMV 352 Query: 320 GSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVR 379 G + + F + ++ + A F + + E + ET +++ E H R + +R Sbjct: 353 GECSPEAFRLLEQESPSFAALFTPLFLPEATPSETFRLMVREVRALEQRHAARVSPYVLR 412 Query: 380 AAVELAVKYINDRHLPDKAIDVIDEAG--------ARARLMPVSKRKKTVNVADIESVVA 431 ++L ++ + LP KAID++ E + + V D+ +++ Sbjct: 413 TILDLGGSLLSAQALPGKAIDLLREVVRAGVTPSPSGEPGPARGHAPRPVGSQDVLRLLS 472 Query: 432 RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 + +P + + L + L V GQ +A+ A + + +AGL +P G + Sbjct: 473 QKTGVPRLLLGGDEPLDAGALEEELGRRVIGQPEAVRAAADLVSRIKAGLVDPRRPYGVY 532 Query: 492 LFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 LF GPTG GKTE+ +++ + LLRFDMSE +RL+G + GL Sbjct: 533 LFTGPTGTGKTELARCMAELIYGSASRLLRFDMSEQSGPDAPARLVGDR-----YAPDGL 587 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT V + P +++LLDEIEKAHP V +LLQ+ ++G LTD R A F + V+VMT+N G Sbjct: 588 LTQRVREQPFSLVLLDEIEKAHPSVHGLLLQLFEDGRLTDAAARPAHFHHAVVVMTSNLG 647 Query: 609 VRETERKSIGLI----------HQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 R G ++++ + ++ F PE NR+D ++ F L+ +V Sbjct: 648 ARSRALVGFGGAGLSEARALAIAEESAQEVARAVRDFFPPELFNRIDRVVPFRPLTPEVA 707 Query: 659 HQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPL 716 +V +K + L + L ++ V + +A + + GAR + R I+D + L Sbjct: 708 VRVAEKELDRLLGRRGLAERSVFVRRGAGVAERIAREAFVAEDGARSVKRFIEDEIGSLL 767 Query: 717 ANELLFGSLVDGGQVTVA 734 ++ L G+ + + Sbjct: 768 SDALTRGAPAAMQVIRIF 785 >UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Bermanella marisrubri RepID=Q1N528_9GAMM Length = 859 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 169/576 (29%), Positives = 271/576 (47%), Gaps = 28/576 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACS-VDLVALRQEL 58 L L++SL A A H + + +EH +++L++P E ++ C ++L LR++L Sbjct: 13 LTPTLKMSLEEAAQLAMTHGNFNVEIEHWFISMLNHPHTDFLELIKKCQVIELDNLREDL 72 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQE 117 A ++ S R + L A + ++T A++ +A Sbjct: 73 AASLQYFE-----SGNTRAPAFSRHLMECLNEAWLLASVDQDKEQITSAHIFIAAMKN-S 126 Query: 118 SQAAYL------LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN 171 A + L V+ L+ ++ G + +S S++ + Sbjct: 127 GIAHQIRSIVPSLDGVNVADLEALSHTIIGKTSESAIESPQSSESTQSKQGNTQANYLSK 186 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 + +L A G IDP+IGR+ E+ + + VL RRR+NNP+L GE GVGKTA+ EGLA RI Sbjct: 187 YAVDLTAKAEAGEIDPVIGRDDEVRQLVDVLLRRRQNNPILTGEPGVGKTAVVEGLANRI 246 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTI 290 V DVP+ + + SLD+ SL AG +G+FEKR KA++++++ T I+FIDE HTI Sbjct: 247 VANDVPQPLQGIRLLSLDMASLQAGASVKGEFEKRLKAVIEEVKTATVPIIVFIDEAHTI 306 Query: 291 IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 350 IGAG A G DAANL+KP L+ G+ R I +TT+ E+ FEKD AL RRFQ + + EPS Sbjct: 307 IGAGGAEGTG-DAANLLKPALARGEFRTIAATTWSEYKKYFEKDPALTRRFQVVKVEEPS 365 Query: 351 IEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR 410 IE + ++ L E HH+V +A+ A+V+LA +YI R LPDK++ ++D A AR Sbjct: 366 IESAIDMMRSLASTLEQHHNVTILDEAIEASVKLAARYIPARQLPDKSVSLLDTACARVA 425 Query: 411 LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 L + + + L + + + + + AL Sbjct: 426 LSQGATPSAIEIEQ--RRIEQSQTNLRLLQKESHINSQLDEKIEFYEKQIREAESELVAL 483 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI-ELLRFDMSEYMERHT 529 + ++ +A +G A G + E+ QL G L+ D+ + Sbjct: 484 EDQLEKEQA-------IIGQIKEAREKGESQDELADQLKAIQGESPLVFLDVDKQAVAAI 536 Query: 530 VSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDE 565 + G P G + D+ L + V+ D Sbjct: 537 IESWTGIPVGNMMQDEINGLLSLEDELKKRVVGQDH 572 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 110/379 (29%), Positives = 188/379 (49%), Gaps = 9/379 (2%) Query: 377 AVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR--KKTVNVADIESVVARIA 434 A+ +E I + + DE + + + V+ + +++ Sbjct: 482 ALEDQLEKEQAIIGQIKEAREKGESQDELADQLKAIQGESPLVFLDVDKQAVAAIIESWT 541 Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 IP ++ Q + + L +L D LK V GQD A++ + +A++++R+GL KPVG F+ A Sbjct: 542 GIPVGNMMQDEINGLLSLEDELKKRVVGQDHAMQKIAQAVRISRSGLTDPRKPVGVFMMA 601 Query: 495 GPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD 551 G +G GKTE + L++ L L+ +MSE+ E H VS L+GA GYVG+ QGG+LT+ Sbjct: 602 GTSGTGKTETALALAEHLYGGEDNLITINMSEFKEEHKVSMLLGASAGYVGYGQGGVLTE 661 Query: 552 AVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE 611 AV K P++V+LLDE+EKAHP + ++ + D GT+ D G DF+N +++MTTNA Sbjct: 662 AVRKKPYSVVLLDEMEKAHPGIQDVFYNLFDKGTIKDGEGNDIDFKNTLIIMTTNAATHG 721 Query: 612 TER--KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 + + + D E+ + F P F R + +F LS DV+ ++++ ++ Sbjct: 722 ISKYFGETDINEEALLEDIRPELLEDFRPAFLGRCTIVPYF-PLSEDVLQKIIEINFNKI 780 Query: 670 QVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 + +L+++ SL+ L K D GAR + VI ++ ++N L Sbjct: 781 KKRLNEQYNASLKYDASILEHLLSKCKDPDTGARNVENVINKSILPAISNACLEALAKGQ 840 Query: 729 GQVTVALDKEKNELTYGFQ 747 ++ L E Sbjct: 841 SIESIDLKIESESFIATVA 859 >UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organisms RepID=CLPB_STAAR Length = 869 Score = 356 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 154/497 (30%), Positives = 264/497 (53%), Gaps = 27/497 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 + ++ +L A +++H+ + + +E +L A L+ + + LE ++++ L + E Sbjct: 6 MTYAVQSALQQAVELSQQHKLQNIEIEAILSAALNESESLYKSILERANIEVDQLNKAYE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + V + + +++ +A +++ ++ ++L + ++ Sbjct: 66 DKLNTYASVE-GDNIQYGQYISQQANQLITKAESYMKEYEDEYISMEHILRSAMDIDQTT 124 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 Y+ K EV + + G+ S+ E + + +L + Sbjct: 125 KHYINNKVEVIKEIIKKV--------------RGGNHVTSQNPEVNYEALAKYGRDLVEE 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 R G +DP+IGR++E+ I++L R+ KNNP+L+GE GVGKTAI EGLA RIV+ DVPE Sbjct: 171 VRQGKMDPVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPES 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASG 298 + D T++ LD+ +L+AG KYRG+FE+R KA+LK++++ D ILFIDEIH ++GAG G Sbjct: 231 LLDKTVFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDG 290 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA N++KP+L+ G++ IG+TT E+ EKD AL RRFQK+ ++EP +E+T+ I+ Sbjct: 291 A-MDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTISIL 349 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK +YE +H VR +A+ AA EL+ +YI DR LPDKAID++D+A A R S Sbjct: 350 RGLKERYEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPT 409 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ-------DKAIEALT 471 + V + + + + L+ L + L Q + E + Sbjct: 410 ELDQVNRRVMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIA 469 Query: 472 EAIKMARAGLGHEHKPV 488 ++ RA L + + Sbjct: 470 N-LQEKRAQLDESRQAL 485 Score = 338 bits (866), Expect = 5e-91, Method: Composition-based stats. Identities = 155/435 (35%), Positives = 249/435 (57%), Gaps = 18/435 (4%) Query: 325 QEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA---VRAA 381 +E +N EK AL R + S +E + + + + + A+ + A Sbjct: 445 EELANEKEKQAALQSRVE-------SEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKA 497 Query: 382 VELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSV 441 EL I L + ++ D ++ V +I +V++ IP + Sbjct: 498 AELQYGTIP--QLEKELRELEDNFQDEQGEDSDRMIREVVTDEEIGDIVSQWTGIPVSKL 555 Query: 442 SQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGK 501 +++R+ L +L D L V GQDKA++ +++A+ ARAG+ ++P+GSFLF GPTGVGK Sbjct: 556 VETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGK 615 Query: 502 TEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPH 558 TE+ L+ +L ++R DMSEYME+H VSRLIGAPPGY+G D+GG LT+AV ++P+ Sbjct: 616 TELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPY 675 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK--S 616 +V+LLDE+EKAH DVFN+LLQ++D G LTD+ GR DF+N +++MT+N G + Sbjct: 676 SVILLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIMTSNIGSQVLLENVKE 735 Query: 617 IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK 676 G I + M + F PE NR+D+I+ F LS D + +VDK + +L ++L ++ Sbjct: 736 TGEITESTEKAVMTSLNAYFKPEILNRMDDIVLFKPLSIDDMSMIVDKILTQLNIRLLEQ 795 Query: 677 GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 +S+EVS +A+ WL ++ Y+ GARP+ R +Q ++ PLA ++ +G + V L+ Sbjct: 796 RISIEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLARMMIKEGFPEGTTIKVNLN 855 Query: 737 KEKNELTYGFQSAQK 751 + N LT+ + + Sbjct: 856 SDNN-LTFNVEKIHE 869 >UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organisms RepID=Q8IB03_PLAF7 Length = 1070 Score = 356 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 157/436 (36%), Positives = 253/436 (58%), Gaps = 16/436 (3%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSN---PSAREALEACSVDLVALRQELE 59 ++ +++ ++ ++ E LLLALL++ A L+ +D L QE++ Sbjct: 157 TEKAWEAISSLNKIGEKYDSAYVEAEMLLLALLNDSPDGLAERILKESGIDTQLLVQEID 216 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++++ + E++ + Q VL + + ++ ++L++I SE Sbjct: 217 DYLKKQPKMPSGFGEQK--ILGRTLQTVLSTSKRLKKEFNDEYISIEHLLLSIISEDSKF 274 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 L K+ V+ V + K + S+ + +E ++ +L L Sbjct: 275 TRPWLLKYNVNYEKVKKAVEKIRGK----------KKVTSKTPEMTYQALEKYSRDLTAL 324 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP+IGR+ E+ RAIQ+L RR KNNP+L+G+ GVGKTAI EGLA +IVQGDVP+ Sbjct: 325 ARAGKLDPVIGRDNEIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDS 384 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASG 298 + + SLD+ SL+AG KYRGDFE+R K++LK+++ + ++FIDEIHT++GAGA + Sbjct: 385 LKGRKLVSLDMSSLIAGAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAE 444 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA N++KP+L+ G++R IG+TT E+ EKD+AL RRFQ+I + +PS++ET+ I+ Sbjct: 445 GALDAGNILKPMLARGELRCIGATTVSEYRQFIEKDKALERRFQQILVEQPSVDETISIL 504 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK +YE HH VR A+ A L+ +YI+ R LPDKAID+IDEA + ++ SK Sbjct: 505 RGLKERYEVHHGVRILDSALVQAAVLSDRYISYRFLPDKAIDLIDEAASNLKIQLSSKPI 564 Query: 419 KTVNVADIESVVARIA 434 + N+ + Sbjct: 565 QLENIEKQLIQLEMEK 580 Score = 314 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 134/427 (31%), Positives = 233/427 (54%), Gaps = 10/427 (2%) Query: 324 YQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVE 383 I L + +KI + + + V I +K + + V+ + + Sbjct: 645 IDRLKMIDRIMSELRKEQRKILDSWSTEKSYVDNIRAIKERIDV---VKIEIEKAERYFD 701 Query: 384 LAVKY-INDRHLPDKAIDVIDEAGARARLMPVSKR--KKTVNVADIESVVARIARIPEKS 440 L + LPD + +P R K V DI ++V+ I Sbjct: 702 LNRAAELRFETLPDLEKQLKKAEENYLNDIPEKSRILKDEVTSEDIVNIVSMSTGIRLNK 761 Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 + +S+++ + NL + L + GQD A++ +T+A++ +R G+ + +P+ S +F GPTGVG Sbjct: 762 LLKSEKEKILNLENELHKQIIGQDDAVKVVTKAVQRSRVGMNNPKRPIASLMFLGPTGVG 821 Query: 501 KTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 KTE++ L+ L ++ FDMSEYME+H++S+LIGA PGYVG++QGGLLTDAV K P Sbjct: 822 KTELSKVLADVLFDTPEAVIHFDMSEYMEKHSISKLIGAAPGYVGYEQGGLLTDAVRKKP 881 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI 617 ++++L DEIEKAHPDV+N+LL+V+D G L+D G A+FRN +++ T+N G + + Sbjct: 882 YSIILFDEIEKAHPDVYNLLLRVIDEGKLSDTKGNVANFRNTIIIFTSNLGSQSILDLAN 941 Query: 618 GLIHQDN-STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK 676 ++ M+ +++ F PEF NR+D+ + FD LS + ++ + I ++ +L K Sbjct: 942 DPNKKEKIKEQVMKSVRETFRPEFYNRIDDHVIFDSLSKKELKEIANIEIRKVANRLFDK 1001 Query: 677 GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD 736 + + +++ +K YD + GARP+ RVIQ ++ +A +L + V+ + ++L Sbjct: 1002 NFKITIDDAVFSYIVDKAYDPSFGARPLKRVIQSEIETEIAVRILDETFVENDTINISLK 1061 Query: 737 KEKNELT 743 +K + Sbjct: 1062 DQKLHFS 1068 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 60/156 (38%), Gaps = 7/156 (4%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQEL 58 +L + L+ L+ + +E E++++EHLLL+++S S R L +V+ +++ + Sbjct: 234 ILGRTLQTVLSTSKRLKKEFNDEYISIEHLLLSIISEDSKFTRPWLLKYNVNYEKVKKAV 293 Query: 59 EAFIEQTTPVLPASEEERDT--QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQ 116 E + E + + + + NE+ A + I S + Sbjct: 294 EKIRGKKKVTSKTPEMTYQALEKYSRDLTALARAGKLDPVIGRDNEIRRA---IQILSRR 350 Query: 117 ESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSD 152 LL V + +V ++ + + S Sbjct: 351 TKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLK 386 >UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RIQ4_9ACTO Length = 832 Score = 356 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 159/446 (35%), Positives = 248/446 (55%), Gaps = 22/446 (4%) Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT-- 374 R + +E + E D A A R +++ E + ++ + + E H + + Sbjct: 388 RAVRRLEIEEMALAKEPDAASAERLERLRKELADKREQLTALSE-RWQTEKSHITKLSTA 446 Query: 375 AKAVRAAVELAVKYINDRHLPDKA-------------IDVIDEAGARARLMPVSKRKKTV 421 + + A + D L A + +E AR + + K+ V Sbjct: 447 KEELERLGGEAERAERDGELERAAELRYGRIPALKNDLAKAEEELARLQADG-AMLKEEV 505 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 DI +VVA IP + + + L + + L V GQ +A+ A+++A++ ARAG+ Sbjct: 506 GADDIATVVASWTGIPAGRLLEGETAKLLRMEESLGARVVGQTEAVSAVSDAVRRARAGV 565 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPP 538 +P GSFLF GPTGVGKTE+ L++ L + ++R DMSEY E+H+V+RL+GAPP Sbjct: 566 ADPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPP 625 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVG+++GG LT+AV + P++V+LLDE+EKAHPDVF++LLQV+D+G LTD GR DFRN Sbjct: 626 GYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRN 685 Query: 599 VVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 +L++T+N G ++ + + ++ F PEF NRLD+I+ F L D + Sbjct: 686 AILILTSNLGSSMISDLTL--AEEQRREGVLAVVRSHFKPEFLNRLDDIVVFAALLGDDL 743 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 +VD + ++ +L + ++L+VS+ AR WLAE GYD GARP+ R++Q + LA Sbjct: 744 RAIVDIQLDRMRARLADRRLALDVSEAARGWLAEHGYDPIYGARPVRRLVQSAIGDQLAR 803 Query: 719 ELLFGSLVDGGQVTVALDKEKNELTY 744 LL G++ DG V V L K+ LT Sbjct: 804 ALLSGAIRDGDTVQVDLADGKDGLTV 829 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 93/235 (39%), Gaps = 20/235 (8%) Query: 332 EKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYIND 391 EKD AL RRFQ + + EP+I +T+ I+ GLK +YE HH VR T A+ AA L+ +YI D Sbjct: 295 EKDPALERRFQPVLVGEPTIADTIGILRGLKERYEVHHGVRITDAALVAAAALSDRYITD 354 Query: 392 RHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKN 451 R LPDKAID++DE+ +R R+ S+ + + + K + + L+ Sbjct: 355 RFLPDKAIDLVDESASRLRMEIDSRPVEVDEIERAVRRLEIEEMALAKEPDAASAERLER 414 Query: 452 LGDRLKM-----------------LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 L L + A E L A + L Sbjct: 415 LRKELADKREQLTALSERWQTEKSHITKLSTAKEELERLGGEAERAERDGELERAAELRY 474 Query: 495 GPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 G K ++ + L+ D + E + + G G LL Sbjct: 475 GRIPALKNDLAKAEEEL---ARLQADGAMLKEEVGADDIATVVASWTGIPAGRLL 526 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 104/300 (34%), Gaps = 37/300 (12%) Query: 32 LALLSNPSAREA--LEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQ 89 +AL P A A LE +L R++L A E+ + + L+ Sbjct: 398 MALAKEPDAASAERLERLRKELADKREQLTALSERWQTEKSHITKLST------AKEELE 451 Query: 90 RAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQ 149 R + + R+ L + + L + ++ + G E Sbjct: 452 RLGGEAERAERDGE-----LERAAELRYGRIPALKNDLAKAEEELARLQADGAMLKEEVG 506 Query: 150 SSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCR----- 204 + D + S +E T L ++ G ++G+ + + + R Sbjct: 507 ADDIATVVASWTGIPAGRLLEGETAKLLRMEESLG-ARVVGQTEAVSAVSDAVRRARAGV 565 Query: 205 ----RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL--DIGSLL-AGT 257 R + L +G +GVGKT +A+ LA + + V D + Y + L+ A Sbjct: 566 ADPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPP 625 Query: 258 KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 Y G E L + + + S++ +DE+ D +++ +L G++ Sbjct: 626 GYVGYEEG--GQLTEAVRRRPYSVILLDEV---------EKAHPDVFDVLLQVLDDGRLT 674 >UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKR5_FIBSS Length = 855 Score = 355 bits (910), Expect = 5e-96, Method: Composition-based stats. Identities = 158/480 (32%), Positives = 252/480 (52%), Gaps = 25/480 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 + E L A + H ++ HL + L+ P A ++ ++ V LR LE Sbjct: 4 FTNDAEKVLAKAQSLRDRCSHSYLGAAHLAVGLVEGPDATLKKLYKSKGVKPNELRGRLE 63 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 F+++ + D +P R+L+ AV + R VT ++LVA+ Sbjct: 64 PFVQKIPRME---GVNPDVEPDSDLNRILRAAVQAARQVSR-MVTPGDLLVALMK----- 114 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 S + + + A + ++ + L ++ Sbjct: 115 ---------FSGDRGLAKVFEDALGSTEVVETWLSDPFAGAANAEEQSPLKLYGRELVEM 165 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G + P+IGRE+E+ R I +L R+ KNNP LVGE GVGKTAI EGLA RI +GDVP+ Sbjct: 166 AADGKLSPVIGREEEIRRVILILSRKTKNNPCLVGEPGVGKTAIVEGLAERIYRGDVPDA 225 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + +++LD+ +L+AG KYRGDFE+R K+++ +E+D N+++FIDE+H I+GAG G Sbjct: 226 LKGKKVFALDLSALMAGAKYRGDFEERLKSVIDAIEEDGNTLMFIDELHNIVGAGKTE-G 284 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D N++KP L+ G++ IG+TT QE+ EKD AL RRFQ + ++EPS +E + I+ Sbjct: 285 SMDLGNMLKPKLARGELHCIGATTTQEYRKYIEKDSALERRFQPVQVSEPSEDEAISILR 344 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+K ++AHH VR A+ AAV+L+ +YI+DR LPDKAID+IDEA + + + + Sbjct: 345 GIKDGFDAHHGVRLHDNALVAAVKLSNRYISDRFLPDKAIDLIDEAASLVKTQMDTVPEA 404 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 + E + + K ++ LK L + L + D A++ + E + RA Sbjct: 405 LDTLQRKELQMKIEEQALSKETDEASVKRLKELREDLAVT----DAAVKQMQERWQDRRA 460 Score = 330 bits (847), Expect = 9e-89, Method: Composition-based stats. Identities = 162/480 (33%), Positives = 255/480 (53%), Gaps = 29/480 (6%) Query: 278 TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRAL 337 +I IDE +++ Q+D L ++++ +E + E D A Sbjct: 381 DKAIDLIDEAASLV------KTQMDTVPEALDTLQRKELQM----KIEEQALSKETDEAS 430 Query: 338 ARRFQKID----ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV-KYINDR 392 +R +++ +T+ ++++ + + + D++ KA + +E A +Y +R Sbjct: 431 VKRLKELREDLAVTDAAVKQMQERWQDRRAAFAEVQDLKKALKAAKDEMEQAEARYDLNR 490 Query: 393 HLPDK-------AIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSD 445 K ++ + A + + V I VV+R IP + + + Sbjct: 491 AAELKYNKIVNIEKELAQKTEALRKSAEEGGLSEEVTEETIALVVSRWTGIPVTKLCEGE 550 Query: 446 RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVT 505 + L +L +RL V GQD+A+EA++EAI R+GL E+ P+GSFLF GPTGVGKTE+ Sbjct: 551 KAKLLHLDERLHARVIGQDEAVEAVSEAILRNRSGLSRENAPIGSFLFLGPTGVGKTELA 610 Query: 506 VQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLL 562 L+ L L+R DMSEYME+H+VSRLIGAPPGYVG+++GG LT+AV HP+ V+L Sbjct: 611 KALAVELFDSENALVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQLTEAVRTHPYCVIL 670 Query: 563 LDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET----ERKSIG 618 LDEIEKAHPDVFN LLQV+D+G LTD GR +F+N +++MT+N G + G Sbjct: 671 LDEIEKAHPDVFNTLLQVLDDGRLTDGKGRTVNFKNTLILMTSNLGAEKFRLSAANAKNG 730 Query: 619 LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV 678 Q D ++ F PEF NRLD ++ F LS I ++V +L + ++ + Sbjct: 731 EPPQVALADVEADLHAFFRPEFLNRLDEVLVFQSLSKKQIREIVKLKFADLANRAARQDL 790 Query: 679 SLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 L +S A + +AE Y GARP+ R I+ N+++PL++ +L G++ V Sbjct: 791 VLTLSDAALDAIAEGAYQPEFGARPIQRYIERNIERPLSHAILSGTVSAAKPAVVDYKDG 850 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 98/298 (32%), Gaps = 46/298 (15%) Query: 37 NPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ 96 + ++ + L+ DL ++ E+ A E +D ++ L+ A ++ Sbjct: 427 DEASVKRLKELREDLAVTDAAVKQMQERWQDRRAAFAEVQD------LKKALKAAKDEME 480 Query: 97 SSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQ 156 + + A K ++ + E S+ ++ Sbjct: 481 QAEARY------------DLNRAAELKYNKIVNIEKELAQKTEALRKSAEEGGLSEEVTE 528 Query: 157 PNSEEQAGGEERMENFTTNLNQLARVGGIDP-----LIGREKELERAIQVLCRR------ 205 + + A++ +D +IG+++ +E + + R Sbjct: 529 ETIALVVSRWTGIPVTKLCEGEKAKLLHLDERLHARVIGQDEAVEAVSEAILRNRSGLSR 588 Query: 206 ---RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL--DIGSLL-AGTKY 259 + L +G +GVGKT +A+ LA + + V D + Y + L+ A Y Sbjct: 589 ENAPIGSFLFLGPTGVGKTELAKALAVELFDSENALVRIDMSEYMEKHSVSRLIGAPPGY 648 Query: 260 RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 G E L + + ++ +DEI D N + +L G++ Sbjct: 649 VGYEEG--GQLTEAVRTHPYCVILLDEI---------EKAHPDVFNTLLQVLDDGRLT 695 >UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L5D3_9GAMM Length = 917 Score = 354 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 152/491 (30%), Positives = 235/491 (47%), Gaps = 32/491 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL--EACSVDLVALRQELE 59 L+ + A + + +EHL LALL P + L + +L ++L Sbjct: 12 LDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRSGILPESLERDLN 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQES 118 I Q + R + ++ + A S + ++L+A+ +E + Sbjct: 72 DEISQF-----KTGNSRTPVFSQHIPKLFEHAWLIASLDSETTRIRSGHLLLALLTEPDL 126 Query: 119 Q-----------------AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEE 161 + K + V + D G+ P + Sbjct: 127 AQLAYRGSKLFVRFKRDELKHDFAKLTEGSQEAVQTVRFADASAAGEAGEDEGAVPGEAK 186 Query: 162 QA-GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGK 220 ++ FTTNL Q AR G IDP+IGR+ E+ + I +L RRR+NNP+L GE+GVGK Sbjct: 187 GGLSKTPALDQFTTNLTQRARDGKIDPVIGRDGEIRQVIDILMRRRQNNPILTGEAGVGK 246 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-N 279 TA+ EGLA RI DVP+V+ +++LD+G L AG +G+FE R K ++ ++++ Sbjct: 247 TAVVEGLARRIADKDVPDVLQGVELHTLDMGLLQAGASVKGEFENRLKNVIDEVKKSPHP 306 Query: 280 SILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 ILFIDE HT+IGAG + GQ DAANL+KP L+ G++R I +TT+ E+ FEKD ALAR Sbjct: 307 IILFIDEAHTMIGAGGTA-GQNDAANLLKPALARGELRTIAATTWGEYKKYFEKDAALAR 365 Query: 340 RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 399 RFQ + + EPS ++ G+ EAH ++R +AV AV L+ +YI+ R LPDKA+ Sbjct: 366 RFQVVKVEEPSEALAAAMLRGMVGLMEAHFNIRVLDEAVTEAVRLSHRYISGRQLPDKAV 425 Query: 400 DVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 V+D A A+ L + + + ++ + G+RL L Sbjct: 426 SVLDTACAKVALGQSATPAIIEDTRKHLDRLQ----AEISALQRETAGGSDQHGERLAEL 481 Query: 460 VFGQDKAIEAL 470 Q +A L Sbjct: 482 HAQQAEAQAVL 492 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 105/418 (25%), Positives = 189/418 (45%), Gaps = 20/418 (4%) Query: 348 EPSIEETVQIINGLKPK------YEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 E + + ++ + + A P A Sbjct: 502 ERDLAGRIAVLRQQMEQGEAASGDPEPSNDDNEGDVAVAKPAAKRGKAKAELSPQHAELA 561 Query: 402 IDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF 461 +A R V+ + +V+ +P + + + T++ LG+ L V Sbjct: 562 RLQAELRELQGETPMVPLQVDGTVVAEIVSAWTGVPLGRMVKDEIRTVRTLGNLLVERVI 621 Query: 462 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLR 518 GQD A++A+ + ++ A A L +KP G F+F GP+GVGKTE + L+ L +L+ Sbjct: 622 GQDHALDAIAQRVRTATAKLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGERKLVT 681 Query: 519 FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL 578 +MSEY E H+VS L G+PPGYVG+ +GG+LT+AV ++P++V+LLDE+EKAHPDV + Sbjct: 682 INMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFF 741 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN------STDAMEEI 632 QV D G + D GR+ DFRN ++++T+N G + + + ++ S + Sbjct: 742 QVFDKGMMDDAEGREIDFRNTLIILTSNIGSSQIMQACLNKPAEEIPGAEALSDALRPVL 801 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNWLA 691 + F P F RL ++ + ++ DV+ Q++ + ++ + + + + Sbjct: 802 MRTFKPAFLGRL-KVVPYYPINDDVLAQIITLKLGRIRDRVIANHKATFSWDDSLVEAVL 860 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ--VTVALDKEKNELTYGFQ 747 + + GAR + ++ L +A +L + V +K + Y Sbjct: 861 ARCTEVDSGARNVDHILNGTLLPEIAESVLAAMAEGNRINAIKVTA-GKKGDFKYKVS 917 >UniRef50_A9ERV8 ATP-dependent Clp protease, ATP-binding subunit,two ATP-binding domains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ERV8_SORC5 Length = 790 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 176/665 (26%), Positives = 293/665 (44%), Gaps = 44/665 (6%) Query: 110 VAIFSEQESQAAYLLRKH------EVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQA 163 ++ E S A +LR+ S + +F G P S + Sbjct: 139 WSVVLEDLSIAPDVLRQLVTSALLGESPRSLFDFRREGDEYVRPWSPRRMERAGRSARRP 198 Query: 164 GGE-ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRR---KNNPLLVGESGVG 219 E + + +L + A + +G +ELERA+ + R + LLVG GVG Sbjct: 199 EDERPTLHAVSEDLVEKAARQRLPLAVGESEELERALPLFDAARATSMPSILLVGGPGVG 258 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCT-IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT 278 KT LA R + A ++S LLAG KY G ++ R L+ +L + Sbjct: 259 KTTWVHRLARRFAAWRRDKARASSPGLFSTSADRLLAGMKYLGMWQARCLRLVSELSHEG 318 Query: 279 NSILFIDEIH--TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 D +H ++ ++ P L +G++ +I T E + + Sbjct: 319 ------DLLHVGALLPLLRPQPDGASIGDVFLPALRTGEVSLIAECTEPELEACQRRAAS 372 Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L FQ + + EP ++ + + VR + V+ + D P Sbjct: 373 LVACFQIVRLREPDAAAVPALLAEYEAR--KETRVRLHPAGKKRLVQHLAMFRRDVLFPG 430 Query: 397 KAIDVI----DEAGARARLMPVSKRKKTVN---VADIESVVARIARIPEKSVSQSDRDTL 449 KA EAG RA + D+ AR + +P + ++ + Sbjct: 431 KAFRFFDWLAQEAGTRAGAEAEAAGAAPARVLYPRDVSEAYARHSGLPIELIADEIPASA 490 Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 + + LK V GQD+A + + +AG+ +P G+ LF GPTGVGKTE+ +L+ Sbjct: 491 ETIARGLKRRVIGQDEACDTAARVLARFKAGMNDPERPCGTLLFVGPTGVGKTELAKELT 550 Query: 510 KALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI 566 +++ + ++R DMSEY + +RL+ A P L V + P +++LLDEI Sbjct: 551 RSMFGDEGRMIRLDMSEYRLPGSSARLLAAGP------DATTLAQRVRQEPLSLVLLDEI 604 Query: 567 EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH----- 621 EKAH +VF++LL ++ G LTD +GR DFR V++VMT+N GV + G Sbjct: 605 EKAHREVFDLLLGILGEGRLTDEDGRHVDFRMVLIVMTSNLGVADRAPVGFGGDDGRALP 664 Query: 622 QDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVS 679 A +++ F PEF NR+D+++ F L D + ++VD + + + + L ++ + Sbjct: 665 PGARRGAPAGVREHFRPEFVNRIDHVVQFRGLGRDSVLRIVDLELAKAEARTGLVRRNLR 724 Query: 680 LEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 L V EAR++LAE G+D GARP+ RVI++ + P+A + +V VA Sbjct: 725 LRVLPEARSFLAEAGFDPRRGARPLKRVIEERVITPIAARMAEDPGCRDREVVVAGGGAG 784 Query: 740 NELTY 744 E+ + Sbjct: 785 LEVRF 789 >UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria RepID=CLPB_YEREN Length = 890 Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats. Identities = 144/507 (28%), Positives = 240/507 (47%), Gaps = 31/507 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L+ L + A + + ++ + H L L + + +VD+ A + L Sbjct: 12 LDATLFKGIESATTICKLRGNPYVELIHWLNQLWHQEDNDLKHIVRYFAVDVDAFERGLA 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQES 118 + + + + + ++RA + + ++L+A+ + E Sbjct: 72 QALARLP-----VGATSISDFSYHIELAIERAWVYASLECLDTRIRSGHLLLAMLTNMEL 126 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEE----------- 167 + A L E+ ++ + + S + + ++ + S G Sbjct: 127 RRALLAIAPEMEKIPLEHLSSDFNFITQASPETNEAATDGSPMYDGTLPGEASNAINGKS 186 Query: 168 --RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 + +TT+L LAR G IDP++GR E+ + +L RRR+NNPLL GE+GVGKTA+ E Sbjct: 187 TATLAQYTTDLTALAREGKIDPVLGRNHEISTMVDILLRRRQNNPLLTGEAGVGKTAVVE 246 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFI 284 GLA IV G++P ++ ++ +LD+ +L AG +G+FE R K +L + ILFI Sbjct: 247 GLALAIVAGEMPPALSQVSLLTLDVVALSAGASMKGEFEARLKNVLDEAMASPTPVILFI 306 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DE+HT++GAG +G DAANL+KP L+ G++R IG+TT+ EF EKD AL RRFQ + Sbjct: 307 DEVHTLVGAGGNAGTG-DAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVL 365 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EP + + ++ GL P E HH V +A++AAV L+ +YI R LPDKAI ++D Sbjct: 366 QVDEPDEDTAISMLRGLTPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAISLLDT 425 Query: 405 AGARARLMPVSKRKKTVNVADIESV----VARIARIPEKSVSQSDRDTLKNLGDRLK--- 457 A AR + S+ + + ++ + + Q +R L Sbjct: 426 ACARVAVAQFSQPAELQQLTFQSETAQTELSSLEKAQHFGKGQDERTALLEATIAQHSAA 485 Query: 458 -MLVFGQDKAIEALTEAIKMARAGLGH 483 + + +A L AI R L Sbjct: 486 ANKLEQRWQAERELVTAITATRTVLYE 512 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 109/343 (31%), Positives = 176/343 (51%), Gaps = 10/343 (2%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 + VN I ++VA I + + D + L RL+ V GQ A+ L+E I A Sbjct: 549 QAEVNATVIANIVADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPHALVQLSENIMTA 608 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLI 534 RAG+ KP+G F+ GP+GVGKTE + +++++ L+ +MSEY E HTVS L Sbjct: 609 RAGMADPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNLITINMSEYQESHTVSSLK 668 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 G+PPGYVG+ +GG+LT+AV + P++V+LLDEIEKAH DV + QV D G + D GR Sbjct: 669 GSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFDKGQMEDGEGRFI 728 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAM----EEIKKIFTPEFRNRLDNIIWF 650 DF+N +L++T+N G + + E+ K+F F R+ +I + Sbjct: 729 DFKNTILLLTSNVGSELLSNLFADPDTAPDQDGILSALQPELLKVFPAAFLGRVT-VIPY 787 Query: 651 DHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQ 709 L + +V + + +L Q ++L+ S + + + GAR + R I+ Sbjct: 788 LPLQQSALQHIVRLHLDRIGQRLQSQHQLTLQYSDVVVDDVVSRCSVAETGARMLIRYIE 847 Query: 710 DNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKH 752 N+ + +L Q+ V +DK +N+ T + + + Sbjct: 848 QNITPEIGKFILRDHDAIPNQI-VFVDKVENKFTVSVLNEKIN 889 >UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria RepID=CLPB_BLOFL Length = 872 Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats. Identities = 167/485 (34%), Positives = 260/485 (53%), Gaps = 20/485 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP---SAREALEACSVDLVALRQEL 58 ++ +L+L+ A + A ++F+ H++ L S R L ++ L + + Sbjct: 6 FDRSFQLALSDAQSIAIGKDNQFIEPVHVMYTFLKEKKYKSIRNLLIHAGSNVDQLYKSV 65 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E P + + + +R+ Q + + ++L Q N + ++A Q+ Sbjct: 66 EQVCND-LPRVESVDGDREVQCSHALVKILNLCDKLAQKYHSNIIFSEVFIIAALQSQD- 123 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 + LL+K + + + + Q + + + +E FT ++ Sbjct: 124 VLSILLKKSGIVKELLEKLV----------QYEQSNYSIHDDSFKNRTQILEQFTVDITS 173 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 LA +DP+IGR++E+ R IQVL RR KNNP+L+G GVGKTAI EGLA RI+ +VPE Sbjct: 174 LAEQNNLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGNPGVGKTAIVEGLAQRIINKEVPE 233 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + I SLDI +LLAGTKYRG+FE+RFK +L + +D N+ILFIDE+H ++GAG Sbjct: 234 GLKNSRILSLDIAALLAGTKYRGEFEERFKKVLYAVSKDNNTILFIDELHVMVGAGKTD- 292 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA+N+IKP L+ G++ +G+TT E+S EKD AL RRFQKI I EP+IE T+ I+ Sbjct: 293 GSMDASNMIKPKLARGELHCVGATTLDEYSRYIEKDAALERRFQKIFIIEPNIENTIAIL 352 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK +YE HH+V T A+ AA L+ +YI+DR LPDKAID+IDEA + R+ SK + Sbjct: 353 RGLKERYELHHNVHITDPAIVAAATLSNRYISDRQLPDKAIDLIDEAASSIRIQIDSKPE 412 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 + + + +K + + L+ L L ++ L K R Sbjct: 413 DLDRLDRRIIQLKLECQALKKESDELSKKRLEILSMELSQK----EQEYSVLESEWKRER 468 Query: 479 AGLGH 483 + L Sbjct: 469 SSLFD 473 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 130/425 (30%), Positives = 234/425 (55%), Gaps = 14/425 (3%) Query: 332 EKDRALARRFQKIDITEPSIEETVQII----NGLKPKYEAHHDVRYTAKAVRAAVELAVK 387 E D +R + + + E+ ++ + +++ + + ++ + + Sbjct: 434 ESDELSKKRLEILSMELSQKEQEYSVLESEWKRERSSLFDIQNIKSDLEKAKTILDQSRR 493 Query: 388 YINDRHLPDKAIDVIDEAGARA------RLMPVSKRKKTVNVADIESVVARIARIPEKSV 441 + + + I E + + + V+ +I V+++ IP + Sbjct: 494 IGDLAQMSELQYGRIPELEKKLFNAIQSSNKKMRLLRNYVSEVEIAEVLSKWTGIPISRI 553 Query: 442 SQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGK 501 ++++ L N+ L LV GQD+A+ ++ AI+ +R+GL +P+GSF+F GPTGVGK Sbjct: 554 LANEKNKLLNMETILHQLVIGQDEAVRVISNAIRRSRSGLSDPKRPIGSFMFLGPTGVGK 613 Query: 502 TEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPH 558 TE+ LS+ L ++R DMSE+ME+H+VS+L+GAPPGY+G++ G LT+++ + P+ Sbjct: 614 TELCKALSQFLFDTDNAMVRIDMSEFMEKHSVSKLLGAPPGYIGYESGAYLTESIRRRPY 673 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG 618 +++LLDEIEKAH DVFNILLQV+D+G LTDN GR DF N V++MT+N G ++K Sbjct: 674 SIVLLDEIEKAHLDVFNILLQVLDDGRLTDNQGRMVDFNNTVIIMTSNLGSDLIQKKFDI 733 Query: 619 LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV 678 + + + + F PEF NR+D I+ F LS + + + + L +L+++G Sbjct: 734 SDYDTMKKTVLNVVNQYFRPEFINRIDEIVVFHPLSIKHLIDIANIQLKYLYSRLEERGY 793 Query: 679 SLE-VSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDK 737 ++ +A +L++ G+D GARP+ R+IQ ++ PL+ ++L L+ G +T+ + Sbjct: 794 PRTGITNKALLFLSKIGFDPIYGARPLKRIIQQYIENPLSQKILSDDLLPGRSITIDVQN 853 Query: 738 EKNEL 742 + Sbjct: 854 DNIVF 858 >UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=Proteobacteria RepID=C4I651_BURPS Length = 979 Score = 352 bits (902), Expect = 4e-95, Method: Composition-based stats. Identities = 150/475 (31%), Positives = 229/475 (48%), Gaps = 26/475 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 L L ++ A + + ++ + H L LL + + ++ AL +++ Sbjct: 12 LGATLFRAIESATVFCKLRGNPYVELVHWLQQLLQQSDSDLHRIVRHAGIERDALDRDIA 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQES 118 + + + + ++RA G + GA ++ A+ E Sbjct: 72 RALAALPAGAGSIS-----DFSHHVETAIERAWVLATLRFGDRRIRGAWLVAALVDTPEL 126 Query: 119 QAAYLLRKHEVSR---LDVVNFISHGTRKDEPTQSS-----------DPGSQPNSEEQAG 164 + L +R D ++ + P + PG + A Sbjct: 127 RRVLLSISPAFARIPHDDALDDVLPAWTAGSPEAADAPYDHVDSAPASPGEPSGATRAAP 186 Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 +E + T+L AR G IDP+IGRE E+ VL RRR+NNPLL GE+GVGKTA+ Sbjct: 187 NGSPLERYCTDLTARARDGDIDPVIGRELEIRTMTDVLLRRRQNNPLLTGEAGVGKTAVV 246 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILF 283 EGLA I GDVP +AD + S+D+G+LLAG +G+FE R K +L+ + ILF Sbjct: 247 EGLALAIANGDVPPKLADVRLMSVDVGALLAGAGMKGEFESRLKGVLEAAAKSVAPVILF 306 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 +DEIHT+IGAG +G DAANL+KP L+ G IR IG+TT+ E+ EKD AL RRFQ Sbjct: 307 VDEIHTLIGAGGQAGTG-DAANLLKPALARGTIRTIGATTWAEYKRHIEKDPALTRRFQV 365 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + + EP V ++ G+ + HH V +A+RAAV L+ +YI RHLPDKAI ++D Sbjct: 366 LQVPEPEEPAAVHMVRGVARAFARHHRVTVRDEAIRAAVALSHRYIPSRHLPDKAISLLD 425 Query: 404 EAGARARLMPVSKRKKTVNVAD--IESVVARIARIPEKSVSQSDRDTLKNLGDRL 456 A AR L + + +V + + R E + +L + +R+ Sbjct: 426 TACARVALSQHAAPGELQHVRQRLLAARAERDLLEQEARIGLDAGQSLAAVRERI 480 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 103/325 (31%), Positives = 168/325 (51%), Gaps = 9/325 (2%) Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V+ A + +VA IP + + ++ L L+ V GQ A+ + E ++ AR Sbjct: 620 PEVDEAIVAQIVADWTGIPVGRMMTDEVAAVRALPATLEARVIGQPDALRQIGERVQTAR 679 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIG 535 AGL KP+G FL AGP+GVGKTE + L++AL L+ +MSEY E HTVS L G Sbjct: 680 AGLADPKKPLGVFLLAGPSGVGKTETALALAEALYGGEQSLITINMSEYQEAHTVSGLKG 739 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGYVG+ +GG+LT+AV + P++V+LLDEIEKAH DV + QV D G + D +GR D Sbjct: 740 APPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHRDVHELFFQVFDKGYMEDGDGRYID 799 Query: 596 FRNVVLVMTTNAGVR----ETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 FRN +++T+N G S+ M E+ K+F F R+ +++ + Sbjct: 800 FRNTTILLTSNVGAELSASLCADASLAPDAAALRDALMPELLKVFPAAFLGRV-SVVPYR 858 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKG-VSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L + ++V + + ++ ++ ++L +++ + + GAR + I+ Sbjct: 859 PLEARALARIVRLHLDRVVARMAERHRIALAYDDAVVDYVVGRCLVQETGARLLIGFIEQ 918 Query: 711 NLKKPLANELLFGSLVDGGQVTVAL 735 ++ L+ L + + Sbjct: 919 HVLPRLSALWLDAFPSKAALARIDI 943 >UniRef50_Q1DC82 ClpA/B family protein n=2 Tax=Cystobacterineae RepID=Q1DC82_MYXXD Length = 966 Score = 351 bits (901), Expect = 5e-95, Method: Composition-based stats. Identities = 153/570 (26%), Positives = 255/570 (44%), Gaps = 23/570 (4%) Query: 174 TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +L LAR G + G + + + +L R K +PLL GE GVGK+A+ + +A RI + Sbjct: 41 RDLTALAREGKLPAAHGVDAAVTEVLGLLTRGGK-HPLLAGEPGVGKSALVQEVARRIAE 99 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 G V +A+ + + + ++LA + R + F+ LL L + I++I ++ +G Sbjct: 100 GRVDAELANARVVEVSVANILARSTQR-QAAESFEELLAYLSRHPRPIVYIRDLPAALG- 157 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 A + L +G +R I T + + D ALA R + + EP E+ Sbjct: 158 -------GPLAPVAVRGLRTGGLRFIFETEPKRVQELLRSDEALAERLHLLPLHEPPTEK 210 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 ++ + + E + A A+ L+ K++ + +P KAI+++ E Sbjct: 211 ARWVLGRVAEELERELRLPIDPAACDLALRLSSKFLLAQRMPRKAIELLKETA----AEA 266 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 S K V D+ + R+P V + L + GQ A+ A+ + Sbjct: 267 ASAAKDHVGPEDVLTRFCAATRLPRFVVDDAMPLDLDETERFFGERLLGQTDAVGAVLRS 326 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTV 530 + + +AGL +P+G FLFAGPTGVGKT++ L++ L L+R +M++Y Sbjct: 327 VALLKAGLNDPRRPLGVFLFAGPTGVGKTQLAKLLAEYLFGSADRLVRLNMADYPNDGDE 386 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 S GA + G L+ + VLLLDE EKA V + LQ+ D GT + Sbjct: 387 SVPFGATWAPALETRRGELSALLDGKVFTVLLLDEFEKAARSVHDRFLQLFDEGTFVNGA 446 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIK----KIFTPEFRNRLDN 646 G N ++V T+N G +G + + + E+ + F PEF NR D Sbjct: 447 GETVSCNNTLIVATSNVGAEVYRESGMGFTGARRAEEMVPEVDRRIGEAFRPEFLNRFDA 506 Query: 647 IIWFDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 I F LS I ++ + + + + + + + +EV+ + L E+GY GAR + Sbjct: 507 ICHFRPLSKVDIRKIAQREVGRVLEREGIRARALDVEVTPAVVDLLVERGYSPQFGARYL 566 Query: 705 ARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 R I+ L LA E+ L G V V Sbjct: 567 QREIEKTLTAALAVEIARRPLPPGTPVRVE 596 >UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterobacteriaceae RepID=Q7N4N8_PHOLL Length = 860 Score = 351 bits (901), Expect = 5e-95, Method: Composition-based stats. Identities = 157/461 (34%), Positives = 242/461 (52%), Gaps = 17/461 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 L E L+ A A H + +EHLLLAL P+ + +D + L Sbjct: 12 LTVEARQCLDEAVNLAVRRTHHEVEIEHLLLALFEKQLPTMEQVCHHGGIDSMTL----L 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 +++ +L + T + + Q ++ G +++T ++VA+ Sbjct: 68 NACQRSLALLRSGNHRPPVLATNLTEWMEQTWMYASTHWGASQITAQVLIVALIMNPSLH 127 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + + G TQ++ + + + +T +L Q Sbjct: 128 -----HSLTSELQQALQGNTDGIEPWLRTQTNTTPQHITAPVGDNTQSALAQYTHHLTQA 182 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR +DP++GRE+E+ + I VL RRR+NNPLL GE+GVGKTA+ EGLA RIV G VP+V Sbjct: 183 ARDNKLDPVLGREREIRQLIDVLLRRRQNNPLLTGEAGVGKTALIEGLAQRIVDGRVPKV 242 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGAASG 298 +A +++LD+G L AG +G+FE R + LL ++++ ILFIDE HT+IGAG + Sbjct: 243 LAQAELFTLDMGLLQAGASVKGEFESRLQKLLDEVKKYPTPVILFIDEAHTLIGAGGQA- 301 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 GQ DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ I + EPS+E + ++ Sbjct: 302 GQNDAANLLKPALARGELRAIAATTWSEYKKYFEKDAALARRFQLIKVEEPSLELAIAML 361 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 + P E HH+V+ A+AV AV LA +YI R LPDK++ ++D A AR VS+ Sbjct: 362 RAITPAMEKHHNVKVLAEAVTEAVTLANRYITGRQLPDKSVSLLDSACARV---AVSQTD 418 Query: 419 KTVNVADIESVVARIARIPEKSV-SQSDRDTLKNLGDRLKM 458 + + D+ +++A IA E + L+ L R Sbjct: 419 EPAPIEDLRAMLANIAAEQEALLREGGHETQLQKLAQRQAK 459 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 185/347 (53%), Gaps = 15/347 (4%) Query: 410 RLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEA 469 R + V+ A + +VA IP + +++RD L+ L RL V GQD A+ Sbjct: 501 RHHQHAYVFDCVDAACVADIVAGWTGIPLGRMVENERDVLRQLETRLGQRVMGQDHALSQ 560 Query: 470 LTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYME 526 + I++A+ L KP G F+ AGP+GVGKTE + L+ L L+ +MSEY E Sbjct: 561 IARQIRIAKVQLADPIKPTGVFMLAGPSGVGKTETALALAHELYGGEHHLITINMSEYQE 620 Query: 527 RHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTL 586 H+VS L G+PPGYVG+ QGG+LT+AV + P++V+LLDE+EKAHPDV + QV D G + Sbjct: 621 AHSVSGLKGSPPGYVGYGQGGVLTEAVRRQPYSVVLLDEVEKAHPDVLELFFQVFDKGMM 680 Query: 587 TDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH----------QDNSTDAMEEIKKIF 636 D G++ +FRN ++++TTNA R ++ + +D E+++IF Sbjct: 681 EDAEGQQINFRNTLIILTTNAASDLVMRAAMHGVKEQGENRPATLEDIQEIIRPELQRIF 740 Query: 637 TPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGY 695 TP F RL +I + + +V+H +V + ++ + Q L S +++A+ Sbjct: 741 TPAFLGRLQ-VIPYLPVQGEVLHAIVHHKLNKIVTRYRQSTQCELHYSDTLVDFIAKGCQ 799 Query: 696 DRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 GAR + ++ + L+++LL G + V + + + +L Sbjct: 800 IAESGAREIDNLLTQFVLPLLSDQLLLGGVPVNQDVWMDVIDGQIQL 846 >UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=Bacteria RepID=B7H4I2_ACIB3 Length = 893 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 149/504 (29%), Positives = 245/504 (48%), Gaps = 33/504 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP---SAREALEACSVDLVALRQEL 58 L+ +L + ++ + +EHL L LL+ P + L+ + AL +L Sbjct: 12 LSTAARTALEKSANACVLQQNYEIEIEHLFLELLNQPLENDLKILLKKYKISADALADDL 71 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 + I Q R S R+ ++A + + ++LVA+ + + Sbjct: 72 KETISQLPK-----GNTRTPIFAKSIVRLFEQAWLLASAEQNPVIRSGHLLVALLTAPDL 126 Query: 119 Q-----AAYLLRKHEVSRLD------VVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEE 167 A+ L + + + +Q+ + + Sbjct: 127 YQIATRASSLFDLFPIDSMKHKFLEICEKSVEQQEESKTSSQADELEQAATPTAKTQKTP 186 Query: 168 RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGL 227 ++ +T NL + A+ GGIDP+IGRE E+ + +L RRR+NNP+L GE GVGKTA+ EGL Sbjct: 187 ALDQYTINLTEKAKNGGIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGVGKTAVVEGL 246 Query: 228 AWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDE 286 A +I QG VPE + + ++ LD+G L AG +G+FE R K ++++++ ILFIDE Sbjct: 247 ALKIAQGLVPEALKNVHLHVLDMGLLQAGASVKGEFENRLKQVIQEVQSSAHPIILFIDE 306 Query: 287 IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 HT+IGAG + GQ DAANL+KP L+ G++R I +TT+ E+ FEKD AL+RRFQ + + Sbjct: 307 AHTLIGAGGQA-GQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQVVKV 365 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EP+ E V ++ + P + H +++ +A+ AV + +YI+ R LPDKA+ V+D A Sbjct: 366 EEPTEEVAVDMLRAMIPVMQKHFNLQIDDEAIVTAVHASHRYISGRQLPDKAVSVLDTAA 425 Query: 407 ARARLMPVSKRKKTVNVADIESVVARIARIPEK-----SVSQSDRDTLKNLGDRLKMLV- 460 AR L ++ K + E + +I E + + LKN + L+ + Sbjct: 426 ARVALTQNAQPVKLDQLKAQEHNLKLEQQILENEHRQIPIHHERLENLKNQLESLQSEIQ 485 Query: 461 ----FGQDKAIEALTEAIKMARAG 480 Q + L I+ A Sbjct: 486 ETQEQWQKEL--ELVRKIQELEAQ 507 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 169/807 (20%), Positives = 325/807 (40%), Gaps = 68/807 (8%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACS-----VDLVALR 55 + + + A+ A ++ + HLL+ALL+ P + S + +++ Sbjct: 87 IFAKSIVRLFEQAWLLASAEQNPVIRSGHLLVALLTAPDLYQIATRASSLFDLFPIDSMK 146 Query: 56 QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE 115 + E+ + E++ +++ + + Q A ++ + + + ++ Sbjct: 147 HKFLEICEK------SVEQQEESKTSSQADELEQAATPTAKTQKTPALDQYTINLTEKAK 200 Query: 116 QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE--------EQAGGEE 167 + R++E+ ++ I R++ P + +PG + Q E Sbjct: 201 NGGIDPVIGREYEI---RLMLDILMRRRQNNPILTGEPGVGKTAVVEGLALKIAQGLVPE 257 Query: 168 RMENFTTNLNQLARVGGIDPLIG-REKELERAIQVLCRRRKNNPLLVGES----GVGKTA 222 ++N ++ + + + G E L++ IQ + L + E+ G G A Sbjct: 258 ALKNVHLHVLDMGLLQAGASVKGEFENRLKQVIQEVQSSAHPIILFIDEAHTLIGAGGQA 317 Query: 223 IAEGLAWRIVQGDVPEVMA---------DCTIYSLDIGSLLAGTKYRGDFEKRFKAL-LK 272 A + + + D L+ E+ + + + Sbjct: 318 GQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAA--LSRRFQVVKVEEPTEEVAVD 375 Query: 273 QLEQDTNSI-----LFIDE--IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTT-- 323 L + L ID+ I T + A + +L + RV + Sbjct: 376 MLRAMIPVMQKHFNLQIDDEAIVTAVHASHRYISGRQLPDKAVSVLDTAAARVALTQNAQ 435 Query: 324 YQEFSNIFEKDRALARRFQKIDIT---EPSIEETVQIINGLKPKYEAH-----HDVRYTA 375 + + ++ L Q ++ P E ++ + ++ + Sbjct: 436 PVKLDQLKAQEHNLKLEQQILENEHRQIPIHHERLENLKNQLESLQSEIQETQEQWQKEL 495 Query: 376 KAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIAR 435 + VR EL + ++ I++I + A + + VN I +++ Sbjct: 496 ELVRKIQELEAQSHSNESEAYDQINLIRKDLADIQGQQP-LVFERVNSQIINEIISDWTG 554 Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 IP + + + L D+L V GQD A+ L + IK ++A L +KP G FL G Sbjct: 555 IPVGKMVNDEIKQILTLEDKLGERVMGQDYALTQLVQGIKTSKAKLEDPNKPQGVFLLVG 614 Query: 496 PTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 P+GVGKTE + L+ L L+ +MSEY E HTVS L GAPPGYVG+ QGG+LT+A Sbjct: 615 PSGVGKTETALALANELYGGEQHLITINMSEYQEAHTVSSLKGAPPGYVGYGQGGVLTEA 674 Query: 553 VIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET 612 V ++P++V+LLDEIEKAH DV + QV D GTL D GR DF+N +++T+N G Sbjct: 675 VRRNPYSVVLLDEIEKAHSDVQELFYQVFDKGTLEDGEGRVIDFKNTTILLTSNTGSSAI 734 Query: 613 ERKSIG------LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFI 666 + + +D + K F P F R+ + +F L D++ +++ + Sbjct: 735 MQACLNQPVEEWPTAEDLIEHLKPSLYKQFKPAFLGRMRIVPYF-PLHDDLLVRIIKHKL 793 Query: 667 VELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSL 725 ++ +++++ G ++ S + L + + GAR + ++ + LA E+L Sbjct: 794 GKITARIEKQYGTEVQYSDDLVELLLSRCTEVDSGARNVDNILNSTVLPALATEILVALA 853 Query: 726 VDGGQVTVALDKEKNELTYGFQSAQKH 752 + +D + +E+ Y K Sbjct: 854 DQKLPKLIMIDAKDDEIQYLLDPVAKP 880 >UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi RepID=D2VCN5_NAEGR Length = 891 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 162/476 (34%), Positives = 257/476 (53%), Gaps = 23/476 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL----------EACSVDL 51 + +++ A+ A++ +H F++ H+ A++ NP +++L ++D Sbjct: 6 FTDKTNQTISDAYMMAKDRKHIFISPLHV-AAVIFNPDDKQSLGFLVCKKVSSSQKTIDC 64 Query: 52 VALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVA 111 + EL+ + V D P VLQ A + + +VL+A Sbjct: 65 NKIADELKNAMNTKISVQ--DPPVEDLAPNRRLVSVLQAAEKIKDQLDDHLLAVDHVLLA 122 Query: 112 IFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN 171 + + + A L + V+ R G + +S++ G + + Sbjct: 123 LMDDSDVSNAILKATNNQLTKQVLKDTLALIRG---------GKKVDSKQAETGYDALNR 173 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 + N+ +AR G DPLIGR+KEL R I+VL RR KNN L+ E GVGK+A+ EGLA RI Sbjct: 174 YGVNMVDMARQGKYDPLIGRDKELARMIRVLSRRTKNNCCLLAEPGVGKSALVEGLAMRI 233 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 GDVP+ + +YSLD+GS++AG+K+RG+FE+R K++LK++E+ + ILFIDEIHT+ Sbjct: 234 ATGDVPKNLQ-TQLYSLDLGSMVAGSKFRGEFEERLKSILKEVEESGDVILFIDEIHTLS 292 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 351 GAG+ +DA+N+IKPLL+ G +R+IG+TT E+ EKD AL RRFQ + + EP++ Sbjct: 293 GAGSTGDNSLDASNMIKPLLARGVLRLIGATTPTEYRKYIEKDAALERRFQPVYLAEPNV 352 Query: 352 EETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 +ET+ I+ GLK +YEAHH VR A+ A L+ +YI R+ PDK+ID+IDEA A R+ Sbjct: 353 QETISILRGLKSRYEAHHGVRILDSAIVEAARLSARYIQGRYNPDKSIDLIDEASANIRV 412 Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAI 467 S+ + + + + A EK + SD T + L + ++ Sbjct: 413 QLNSRPEIIDTLERKKLQLQVEATALEKEKNYSDEKTKQRLEQVKNEISKVDEELK 468 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 194/804 (24%), Positives = 339/804 (42%), Gaps = 78/804 (9%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEAC---SVDLVALRQELE 59 N+ L L A + + V+H+LLAL+ + A+ + L+ L Sbjct: 92 NRRLVSVLQAAEKIKDQLDDHLLAVDHVLLALMDDSDVSNAILKATNNQLTKQVLKDTL- 150 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 A I V E ++ A Q + L + + Sbjct: 151 ALIRGGKKVDSKQAETGYDALNRYGVNMVDMA---RQGKYDPLIGRDKELARMIRVLSRR 207 Query: 120 AAY---LLRKHEVSRLDVVNFIS-HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 LL + V + +V ++ D P + G + F Sbjct: 208 TKNNCCLLAEPGVGKSALVEGLAMRIATGDVPKNLQTQLYSLDLGSMVAGSKFRGEFEER 267 Query: 176 LNQLARV-GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI--- 231 L + + +I E+ + + S + K +A G+ I Sbjct: 268 LKSILKEVEESGDVILFIDEIHTLSGAGSTGDNS----LDASNMIKPLLARGVLRLIGAT 323 Query: 232 --------VQGDVPEVMADCTIYSLDIG-----SLLAGTKYRGDFEKRFKALLKQLEQDT 278 ++ D +Y + S+L G K R + + L + + Sbjct: 324 TPTEYRKYIEKDAALERRFQPVYLAEPNVQETISILRGLKSRYEAHHGVRILDSAIVEAA 383 Query: 279 --------------NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTY 324 SI IDE + + + + K+++ T Sbjct: 384 RLSARYIQGRYNPDKSIDLIDEAS--ANIRVQLNSRPEIIDTL----ERKKLQLQVEATA 437 Query: 325 QEFSNIFEKDRALARRFQKIDITEPSIEETVQ-----------IINGLKPKYEAHHDVRY 373 E + D +R +++ ++E ++ ++N L+ K + ++ Sbjct: 438 LEKEKNY-SDEKTKQRLEQVKNEISKVDEELKPIKLKYEAETSLVNELREKNQKLEKLKA 496 Query: 374 TAKAVRAAVELA-VKYINDRHLPD---------KAIDVIDEAGARARLMPVSKRKKTVNV 423 A +LA + +P+ K I+ +E + + + V Sbjct: 497 KMVDAEARYDLALASDLKYGAIPEIEESIQSLKKKIEQKEEDDRKNGVNSANMTSDVVTP 556 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 I V+AR IP + +++S++D + L +RL V GQ+ AI++L+E+I ++AGL + Sbjct: 557 EQINEVIARWTGIPVQRLNESEKDKVLKLEERLMKRVVGQEDAIKSLSESIIRSKAGLSN 616 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGY 540 +KP+GSFLF G +GVGKT + ++ L + ++R DMSE ME+H+VSRLIG+P GY Sbjct: 617 PNKPIGSFLFLGSSGVGKTYLAKSIAYELFDDEKHMVRIDMSELMEQHSVSRLIGSPAGY 676 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG+ LT+ V + P+ V+L DEIEKAHP V N+LLQ++D+G LTD GR DF+N V Sbjct: 677 VGYSDDNQLTEPVRRQPYTVVLFDEIEKAHPRVLNVLLQLLDDGRLTDGQGRTVDFKNTV 736 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 ++MT+N G + + + M E+++ FTPEF NRLD+I++F+ L++ + Sbjct: 737 IIMTSNIGSKHFLTMNDN-NKETVKKQVMNEVRQHFTPEFLNRLDDILFFEPLTSKHLVN 795 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 VV + L +L ++ +S+++ A + +G+D GARP+AR IQ ++ L+ + Sbjct: 796 VVRLQMESLTERLKERDISIDIRDSACELVISEGFDPNYGARPLARFIQKHIVTELSKLM 855 Query: 721 LFGSLVDGGQVTVALDKEKNELTY 744 L G L DG Q+ + K + T Sbjct: 856 LKGELRDGSQIVIQGVDGKFKFTV 879 >UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q21KI1_SACD2 Length = 897 Score = 351 bits (899), Expect = 8e-95, Method: Composition-based stats. Identities = 165/570 (28%), Positives = 270/570 (47%), Gaps = 33/570 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 L+ E + + A A H ++ VEH L L+ L+ +VD+ + +L+ Sbjct: 21 LSNESKELFEKSIALASSRSHFYIDVEHWLTEALAEEQREIIAILKHFNVDVDRVHADLD 80 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRN-EVTGANVLVAIFSEQES 118 +E T + + + + R+L A S + +V ++L+A+ Sbjct: 81 LALENT-----KTGNDGFPKISPDIVRLLFEAWMIASSQYASVQVLPVHILLALVDSAGL 135 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 + + + + D G N ++ ++ FTTNL Q Sbjct: 136 KTKIGKISKQFEAISGEEIRTQCETLLRGEALQDQGEATN--KKLTKTPSLDQFTTNLTQ 193 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A+ G ID ++GR+ E+ + I VLCRR++NNP+L GE+GVGKTA+ EGLA +I QGDVP Sbjct: 194 QAKDGKIDSILGRDDEIRQIIDVLCRRKQNNPILTGEAGVGKTAVVEGLAVKIAQGDVPT 253 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAAS 297 + + I SLD+G L AG +G+FE R K ++K+++Q + ILFIDE HT+IGAG + Sbjct: 254 AIENVEIRSLDLGLLQAGAGVKGEFENRLKNVIKEVQQSVQSIILFIDEAHTLIGAGNQA 313 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G DAANL+KP L+ G++R I +TT+ E+ FE D AL RRFQ + + EPS+++ + + Sbjct: 314 -GSGDAANLLKPALARGELRTIAATTWAEYKKYFESDAALTRRFQVVKVEEPSVDKAIIM 372 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 + P E HH V AV A+V L+ +YI R LPDK + ++D A AR L + Sbjct: 373 LRNAAPTLEQHHKVVILDAAVSASVNLSHRYIPGRQLPDKCVSLLDTACARVNLSQNTTP 432 Query: 418 KKTV----NVADIESVVARIARIPEKSVSQSDRDTLKNLGD----RLKMLVFGQDKAIEA 469 + V + +IE + R+ + EK S + + + + + Sbjct: 433 ARIVQYSQEIKNIEFEIERLNQEAEKGYEHSASIVELEVKKVGITERYQSLCARWEQEKQ 492 Query: 470 LTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMS-----EY 524 + I AR + + T++T L L ++L S E Sbjct: 493 IINQINSAREKAEEKVQ-------DSDNEESATDLTNTLIAELRVKLKSISGSQPLIYEC 545 Query: 525 MERHTVSRLIGAPPG-YVGFDQGGLLTDAV 553 ++ V+ ++ G VG Q + + + Sbjct: 546 VDEQVVAEVVADWTGIPVGRMQSDEIQNVL 575 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 111/393 (28%), Positives = 198/393 (50%), Gaps = 16/393 (4%) Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR------KKTVNVADIESVVA 431 + +A E A + + D + A D+ + A R+ S + V+ + VVA Sbjct: 497 INSAREKAEEKVQDSDNEESATDLTNTLIAELRVKLKSISGSQPLIYECVDEQVVAEVVA 556 Query: 432 RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 IP + + + +L ++ V GQ ++ +++A++ ARA L +P+G F Sbjct: 557 DWTGIPVGRMQSDEIQNVLSLEQTMEKRVIGQSHGLKLISKAVQTARAKLSDPKRPLGVF 616 Query: 492 LFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 + GP+GVGKTE + L++ L + +MSE+ E H VS L+G+PPGYVG+ +GG+ Sbjct: 617 MLVGPSGVGKTETALTLAEQLYGSEQNMTVINMSEFKEEHKVSMLMGSPPGYVGYGEGGV 676 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT+AV + P++V+LLDE+EKAHP V +I QV D G L D GR DF+N V++MT+N Sbjct: 677 LTEAVRRKPYSVVLLDEMEKAHPGVQDIFYQVFDKGILRDGEGRDIDFKNTVIIMTSNTA 736 Query: 609 VRETERKSIGLIHQDNSTDAMEE----IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 + E+ I + +E +++ + P F R++ I ++ L + ++ Sbjct: 737 SAQIEQLCIDPETKPEPKALLEAIEGTLRETYKPAFLGRINLIPYY-PLDEQCLSEIAVM 795 Query: 665 FIVELQVQLD-QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFG 723 + +Q +++ V L S + + GAR ++ ++ + L LA ++L Sbjct: 796 QLHAIQQRVETNYKVELNYSDKLVEHVVSLCAQSDTGARKISALLNNTLLPVLAEKILTE 855 Query: 724 SLVDGGQVTVALD-KEKNELTYGFQSAQKHKAE 755 +D +V +D E+ E S +++ + Sbjct: 856 IALDKALESVEVDVSEEGEFVVKINSKKENTDD 888 >UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MLM7_9CHLO Length = 886 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 192/621 (30%), Positives = 313/621 (50%), Gaps = 59/621 (9%) Query: 165 GEERMENFTTNLNQ-LARVGGIDPLIGREKELERAIQVL----CRRRKNNPLLVGESGVG 219 G +E F ++ Q A + E ++ + + VL R ++ + + ES V Sbjct: 265 GASTVEKFKKSIEQDAALERRFQQVPVAEPDIAQTVSVLRGLRPRYETHHSIKIHESAV- 323 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLD--IGSLLAGTKYRGDFEKRFKALLKQLEQD 277 A LA R VQG + D I LD ++ + + + QL ++ Sbjct: 324 --VAAAKLASRYVQGR---CLPDKAIDLLDEAAAAVRMQKSLKPEDLDVVDRKMSQLCKE 378 Query: 278 TNSI--LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDR 335 + I I+++H SGG++ A+ L L+ +R T Q+ EK++ Sbjct: 379 RDQIKARLIEDMHK-----HGSGGKMAASCL--HELNEELVRE--RTKQQKLLRDLEKEK 429 Query: 336 ALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVE------------ 383 +R +++ E S E +++N + + +A +V+ A++ A + Sbjct: 430 KASREYKRAT-AELSFSER-RLVNAHEKQRQAADNVKKVTVALQRAQDTDNQAEVLEAKA 487 Query: 384 LAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVAD--------------IESV 429 A + D L DK + E ARA++ ++ +++++ I +V Sbjct: 488 AATRAEQDAKLADKETLHLSEIIARAKVECTKAEEEIMSISEGNGLMTKDEVTDVDIATV 547 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 V+R +P + S++ L L L V GQD A+ ++ EA++ +RA L + PV Sbjct: 548 VSRWTGVPVAKLVASEKAKLLQLDAELHQRVIGQDHAVTSVAEAVQRSRADLSDPNGPVA 607 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 SF+F GPTGVGKTE+ L+ L L+R DMSEYME+H+V+RLIGAPPGY+G+D+G Sbjct: 608 SFMFLGPTGVGKTELAKALANYLFNSDNALIRLDMSEYMEKHSVARLIGAPPGYIGYDEG 667 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G+LTDAV + P++++L DEIEKAH DVFN+LLQ++D G +TD GR FRN +++MT+N Sbjct: 668 GMLTDAVRQKPYSIVLFDEIEKAHVDVFNVLLQLLDEGHVTDTQGRTVSFRNCLIIMTSN 727 Query: 607 AGVRETE----RKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 662 G E + + M ++ F PEF NRLD I F+ LS I ++V Sbjct: 728 LGSDEIAFGDRGRRGRRGPGEMKDKVMAHVRAHFRPEFINRLDEFIVFEPLSHSQIMEIV 787 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 +L +++ + + L++ A ++LA KG+D GARP+ R IQ L + +AN+LL Sbjct: 788 QLQCNKLVERVEGQRMKLDLQPSAIDYLARKGFDPTYGARPVKRAIQSELIQNMANKLLR 847 Query: 723 GSLVDGGQVTVALDKEKNELT 743 G + + V+ DK+ LT Sbjct: 848 GIFQEDDTIVVSADKDGLALT 868 Score = 267 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 139/555 (25%), Positives = 245/555 (44%), Gaps = 29/555 (5%) Query: 58 LEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQE 117 + + +E+ L S + + ++ A+ S + + ++ A Sbjct: 1 MTSDVERVRVALMMSAGVTTAAVLVLSSKTVRGAIAGTLKSVASTIQPTELIEAFDKSDT 60 Query: 118 SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQ--PNSEEQAGGEERMENFTTN 175 + + ++ G D ++ ++ +E F T+ Sbjct: 61 PVINTKMTNISSVQSQASEPLNTGIPHDIAPKNMTTTGTLGVRGDDPDEELSALERFCTD 120 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 + + A+ G +DPL+GR+ E+ R + +LCRR KNNP+L+G GVGKTAI EGLA RIV GD Sbjct: 121 VTEEAKQGVLDPLVGRDDEVRRLVHILCRRTKNNPILLGRPGVGKTAIVEGLAQRIVAGD 180 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLK---QLEQDTNSILFIDEIHTIIG 292 VP + + LD+G++ AG + G+FE+R ++ + Q I+FID+IH + Sbjct: 181 VPTSLLGARLLELDLGAVGAGCQMPGEFEERLSIVVSEVVEASQKGGIIMFIDDIHNLCP 240 Query: 293 AGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIE 352 G + A ++KP L G ++ IG++T ++F E+D AL RRFQ++ + EP I Sbjct: 241 ---PPPGGNNGAAILKPALGRGLLKCIGASTVEKFKKSIEQDAALERRFQQVPVAEPDIA 297 Query: 353 ETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM 412 +TV ++ GL+P+YE HH ++ AV AA +LA +Y+ R LPDKAID++DEA A R+ Sbjct: 298 QTVSVLRGLRPRYETHHSIKIHESAVVAAAKLASRYVQGRCLPDKAIDLLDEAAAAVRMQ 357 Query: 413 PVSKRKKTVNVADIESVVARIARIPEKSVSQSDRD----------TLKNLGDRLKMLVFG 462 K + V S + + + + + L L + L Sbjct: 358 KSLKPEDLDVVDRKMSQLCKERDQIKARLIEDMHKHGSGGKMAASCLHELNEELVRERTK 417 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMS 522 Q + L ++ + + F+ V E Q + ++ + + Sbjct: 418 Q----QKLLRDLEKEKKASREYKRATAELSFSERRLVNAHEKQRQAAD--NVKKVTVALQ 471 Query: 523 EYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIE--KAHPDVFNILLQV 580 + + ++ A +Q L D H ++ ++E KA ++ +I Sbjct: 472 RAQDTDNQAEVLEAKAAATRAEQDAKLADKETLHLSEIIARAKVECTKAEEEIMSI---S 528 Query: 581 MDNGTLTDNNGRKAD 595 NG +T + D Sbjct: 529 EGNGLMTKDEVTDVD 543 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 101/281 (35%), Gaps = 34/281 (12%) Query: 49 VDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANV 108 V+ +++ +++ T L +++ + L + RA + + + + ++ Sbjct: 450 VNAHEKQRQAADNVKKVTVALQRAQDTDNQAEVLEAKAAATRAEQDAKLADKETL---HL 506 Query: 109 LVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER 168 I + +S + + T D T S P ++ A + + Sbjct: 507 SEIIARAKVECTKAEEEIMSISEGNGLMTKDEVTDVDIATVVSRWTGVPVAKLVASEKAK 566 Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRR-----KNNPL----LVGESGVG 219 + L+Q +IG++ + + + R R N P+ +G +GVG Sbjct: 567 LLQLDAELHQR--------VIGQDHAVTSVAEAVQRSRADLSDPNGPVASFMFLGPTGVG 618 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSL--DIGSLL-AGTKYRGDFEKRFKALLKQLEQ 276 KT +A+ LA + D + D + Y + L+ A Y G E L + Q Sbjct: 619 KTELAKALANYLFNSDNALIRLDMSEYMEKHSVARLIGAPPGYIGYDEGGM--LTDAVRQ 676 Query: 277 DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 SI+ DEI VD N++ LL G + Sbjct: 677 KPYSIVLFDEI---------EKAHVDVFNVLLQLLDEGHVT 708 >UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subunit n=63 Tax=Bacteria RepID=Q2SEG4_HAHCH Length = 919 Score = 349 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 144/499 (28%), Positives = 237/499 (47%), Gaps = 22/499 (4%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELEA 60 + SL A++ RH + +EH+LL +L + LE VD+ + +EL Sbjct: 14 TSVVRKSLEDGLRLAQQERHSSLEIEHVLLKVLEQSDSDLDRVLEQLGVDIGKVSRELSQ 73 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQESQ 119 + + P + L+ G N ++ A++ A+ S + Sbjct: 74 TVGKFHRDNPRD----MVPFSPLVVDALKAGWLLASVEMGVNFISSAHLFAAVMSHNTMR 129 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDP-----GSQPNSEEQAGGEERMENFTT 174 L + + + + + S ++ +T Sbjct: 130 NQLLSSVKTLQEISLEKVLPAVKAVTGQSSESRAYLKAAAGGGAPAAPTAQGGALQKYTV 189 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 NL + A IDP++GR+ E+ + I +L RRR+NNP+L GE+GVGKTA+ EGLA RI Q Sbjct: 190 NLTERALNNEIDPVLGRDPEIRQCIDILTRRRQNNPILTGEAGVGKTAVVEGLALRIAQK 249 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGA 293 DVPE + I+ LD+G L AG +G+FE+R K+++++++ I+FIDE HT+IGA Sbjct: 250 DVPEPLQGVHIHVLDLGLLQAGASMKGEFEQRLKSVIEEVKASPAPIIMFIDEAHTMIGA 309 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G GQ DAANL+KP L+ G++R I +TT+ E+ FE+D AL RRFQ + + EP+ Sbjct: 310 GGKE-GQGDAANLLKPALARGELRTIAATTWAEYKKYFERDPALTRRFQVVKVEEPTEAV 368 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 + ++ G+ HH+VR + A+ AV+L+ +YI R LPDK + ++D A AR L Sbjct: 369 AIDMLRGISKILAIHHNVRISDDAIIQAVKLSARYIPGRQLPDKGVSLLDTACARVSLSQ 428 Query: 414 VSKRK-KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG-------QDK 465 + I+ + + I ++++S + L K ++ Q + Sbjct: 429 SATPSLIEDTRRRIQQIDTNLDLISQENISSGEYHETLELLTEEKAVLEASLAAQTEQWE 488 Query: 466 AIEALTEAIKMARAGLGHE 484 + L I R L + Sbjct: 489 KEKDLIAKILEVRTKLEQD 507 Score = 247 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 109/406 (26%), Positives = 188/406 (46%), Gaps = 14/406 (3%) Query: 351 IEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR 410 +E I L+ + + D + A L+ + + + + + A A A+ Sbjct: 488 EKEKDLIAKILEVRTKLEQDYQAKKGPEDAGDRLSDEEVAELQV---EFKNLFAALASAQ 544 Query: 411 LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 V+ + VVA IP + + + + NL ++L+ V GQ A+EA+ Sbjct: 545 GDQP-LMMPHVDGQAVAEVVANWTGIPVGKMVSDEINGILNLHEQLEKRVIGQSHALEAI 603 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMER 527 +AI+ +RAGL KP+G FL GP+GVGKTE + L+ L L +M+E+ E Sbjct: 604 AQAIRTSRAGLTDPRKPIGVFLMVGPSGVGKTETALALADTLFGGEQNLTVINMAEFKEE 663 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 H VS L+G+PPGYVG+ +GG+LT+A + P++V+LLDE+EKAH V ++ + D G++ Sbjct: 664 HKVSMLLGSPPGYVGYGEGGVLTEAARRKPYSVILLDEMEKAHQGVQDVFYNLFDKGSIK 723 Query: 588 DNNGRKADFRNVVLVMTTNAGVRET----ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNR 643 D GR DF+N V++MT+NAG + E+ K F P F R Sbjct: 724 DGEGRDIDFKNTVIIMTSNAGEEAIRAICAQSEEKPEPDVMLDSMRHELLKYFKPAFLGR 783 Query: 644 LDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGAR 702 N+I + L + + ++ + + ++ G + ++ + + + GAR Sbjct: 784 -ANVITYYPLDDENLFKICRINMDRIARRVRNHYGAAFTYDEDVLLNIVARSQEVDTGAR 842 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTVALDK-EKNELTYGFQ 747 + ++ + L+ E L + + E+ Y F Sbjct: 843 NIEHILNRTVLPELSTECLSRLANGEHIEHIHISATEEGNFGYLFN 888 >UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding subunit n=15 Tax=Gammaproteobacteria RepID=A7JYI1_VIBSE Length = 892 Score = 348 bits (892), Expect = 5e-94, Method: Composition-based stats. Identities = 153/517 (29%), Positives = 240/517 (46%), Gaps = 20/517 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 L+ +++L A A A + + +EH LL+LL N L LRQ + Sbjct: 13 LHPIAKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDVLLSHFDCSENLLRQSVR 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + ++ + + L + + + + ++ +L+ + S Sbjct: 73 STLDTSAK----GNGSKPVFSALLIEWLQESWLVSSLDLSETQIRSGALLLTLVSNPLRY 128 Query: 120 AAYLLRK--HEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 + V+ + + T + Q + + + FTT+ Sbjct: 129 GQHGYASTLEAVNPDSLKRNFAELTSQSIEAQ----VATSEKTQAREDGSALSKFTTDFT 184 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 AR G IDP+ R++E+ + + +L RRRKNNP+ VGE GVGKTA+ EGLA +IVQGDVP Sbjct: 185 GKARKGEIDPVFCRDQEIRQIVDILARRRKNNPIAVGEPGVGKTAVVEGLALKIVQGDVP 244 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGAA 296 + + +Y LD+G L AG +G+FEKR A+L +++ ILFIDE HT++G G Sbjct: 245 DNLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQ 304 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 +GG DAANL+KP L+ G+++ I +TT+ E+ FEKD ALARRFQ + + EPS E+ Sbjct: 305 AGGS-DAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSPEQAAL 363 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 II GL+P YE H+V A+ AA L+ +YI+ R LPDKAIDV+D A AR + + Sbjct: 364 IIRGLRPAYEKSHNVYVRDDAITAAAALSARYISGRQLPDKAIDVLDTACARVNISLNAI 423 Query: 417 RKKTVNVAD--IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 + A + D+ +L N+ D + E L E Sbjct: 424 PASVETLQQELAAQQRELEALERDALQQTGDKHSLANIPDLE----LAMETTKEELAEQE 479 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA 511 + + G+T +++ Sbjct: 480 AQWHKEKEQIQEMIALRSRLHELVFGETNEEELVAEE 516 Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats. Identities = 131/474 (27%), Positives = 219/474 (46%), Gaps = 33/474 (6%) Query: 286 EIHTIIG-AGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNI---FEKDRALARRF 341 E+ + A +G + AN+ L+ + + ++ ++ AL R Sbjct: 440 ELEALERDALQQTGDKHSLANIPDLELAMETTKEELAEQEAQWHKEKEQIQEMIALRSRL 499 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 ++ E + EE V + +++ D AI Sbjct: 500 HELVFGETNEEELVA------------------EEDSEQEQDVSPYAEMDEEAVRIAISA 541 Query: 402 IDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF 461 E R V ++ V++ IP + Q + +T L + L + Sbjct: 542 CQEQLDAIRNGNP-LVHFEVGPDEVSHVISDWTGIPMGKMLQDEAETTLKLKESLTQSIK 600 Query: 462 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLR 518 GQ+ AI+AL+E I+ A+AGLG+ P G FL GP+GVGKTE ++ + + Sbjct: 601 GQEYAIDALSEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTETARSIADQMFGGERFMTT 660 Query: 519 FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL 578 +MSE+ E+HTVSRLIG+PPGYVG+ +GG+LT+AV + P++V+LLDE+EKA P+V N+ Sbjct: 661 INMSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFY 720 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER---KSIGLIHQDNSTDAMEEIKKI 635 QV D GTL D GR DF+N +++MT+N E E +S + + + + Sbjct: 721 QVFDKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQSKDIDANIIAEAIRPTLNQH 780 Query: 636 FTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKG 694 F P R+ +++ F LS + + +++ + ++ +L +SL + ++ Sbjct: 781 FKPALLARM-SVLPFVPLSDEAMTEIIHHKLNKVSQRLQSHHKLSLSYEESLVEFVLGNC 839 Query: 695 YDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ-VTVALDKEKNELTYGFQ 747 GAR + VI L L+ +LL D + V++D E+ LTY F Sbjct: 840 RLAETGARNIDAVINRQLLPQLSTQLLVHDKDDSHTQIEVSVD-EQGTLTYAFS 892 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 75/202 (37%), Gaps = 40/202 (19%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL--DIGSLL-AGTKYRGDFEKRF 267 LLVG SGVGKT A +A ++ G+ + + + + L+ + Y G E Sbjct: 631 LLVGPSGVGKTETARSIADQMFGGERFMTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGM 690 Query: 268 KALLKQLEQDTNSILFIDE-----------IHTIIGAG---AASGGQVDAAN---LIKPL 310 L + + Q S++ +DE + + G G +D N ++ Sbjct: 691 --LTEAVRQRPYSVVLLDEVEKADPEVLNLFYQVFDKGTLNDGEGRTIDFKNTLIIMTSN 748 Query: 311 LSSGKI------------RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI- 357 L++ +I +I + F+ AL R + S E +I Sbjct: 749 LATHEIESLVHQSKDIDANIIAEAIRPTLNQHFK--PALLARMSVLPFVPLSDEAMTEII 806 Query: 358 ---INGLKPKYEAHHDVRYTAK 376 +N + + ++HH + + + Sbjct: 807 HHKLNKVSQRLQSHHKLSLSYE 828 >UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Proteobacteria RepID=A6FZR3_9DELT Length = 921 Score = 347 bits (891), Expect = 6e-94, Method: Composition-based stats. Identities = 156/504 (30%), Positives = 250/504 (49%), Gaps = 32/504 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 L+ L A RA + + + EHLL ++ + A + L+ D R L Sbjct: 12 LSPVSTGMLEAAVGRAAQGQFYEIVPEHLLYGIVGQEDGDAAQILKHFGQD----RLRLV 67 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 IE+ + +R FQ + G + ++L+ Sbjct: 68 GRIEKVLESMKTGNAKRPVFSEALFQWIEDAWTLSSLLYGVATLRTGHLLLQFCERASRY 127 Query: 120 AAYLLRKHEVSRLDVV-----------NFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER 168 A + E +V+ N + S G+ P + Sbjct: 128 TAEDFPELEAIDTEVLRREFSSVVFNSNELDDVASSGGGGARSGRGAAPGEAGAPSADSA 187 Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 + FT +L Q AR G IDP+ GR +E+ + + +L RRRKNNP++VGE GVGKTA+ EGLA Sbjct: 188 LGQFTVSLTQEARDGRIDPIFGRHREIRQIVDILARRRKNNPIIVGEPGVGKTALVEGLA 247 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEI 287 +IV GDVP+++ + + +LD+G L AG +G+FEKR KA++ +++ ILFIDE Sbjct: 248 LQIVSGDVPDLLKNVELIALDMGLLQAGASVKGEFEKRLKAVISEVKASPTPIILFIDEA 307 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT+IGAGA GG DA+NL+KP L+ G++R + +TT+ E+ FEKD AL RRFQ + Sbjct: 308 HTLIGAGANKGGS-DASNLLKPALARGELRTVAATTWSEYKKYFEKDPALERRFQPVKCD 366 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS+E+ V ++ GL KYE H V +AV AA EL+ +YI+ R LPDKA+D++D A A Sbjct: 367 EPSVEDAVVMLRGLAGKYEEAHGVTIRDEAVVAAAELSGRYISGRQLPDKAVDLLDTAAA 426 Query: 408 RARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQ-------------SDRDTLKNLGD 454 R ++ +K ++ + + + R ++ +++ + ++L+ Sbjct: 427 RVKIEQGAKPQRIEELELELASLDRKRAALDRDIAEHIEVDQDAYAELLGEIESLRESVA 486 Query: 455 RLKMLVFGQDKAIEALTEAIKMAR 478 + + A++A A ++ R Sbjct: 487 KGTQRWVAERDAVKAYNAACEVLR 510 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 162/318 (50%), Gaps = 8/318 (2%) Query: 412 MPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 + + VVA IP + ++ L D L V GQ+ A+ ++ Sbjct: 578 EEDPLVHHECDADVVAKVVANWTGIPVGKMKADTIGSVLALEDVLGSRVKGQEPAVRVVS 637 Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERH 528 E ++MA AG+ + P+G LF G +GVGKTE+ + L+ L + +MSE+ E+H Sbjct: 638 ETVRMAYAGVRDPNTPIGVLLFVGTSGVGKTEMALSLADQLYGGDRFMTTINMSEFQEKH 697 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 TVSRLIG+PPGYVG+ +GG+LT+AV + P++V+LLDE EKA PDV N+ QV D G L D Sbjct: 698 TVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDECEKADPDVMNLFYQVFDKGVLND 757 Query: 589 NNGRKADFRNVVLVMTTNAGVRETERKSIG---LIHQDNSTDAMEEIKKIFTPEFRNRLD 645 GR DFRN ++++T+N R G ++ + F P R+ Sbjct: 758 GEGRTVDFRNTIIILTSNLASDTIMRLYQGDEAPATEEVVEAIRPTVSAHFKPALLARMT 817 Query: 646 NIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQEARNWLAEKGYDRAMGARPM 704 ++ F + +++ ++ + +L+ +L + + S E + L + D GAR + Sbjct: 818 -MVPFRPIGPEIMREIAILKLRKLERRLRETHEIETTFSDELLDELVRRCTDADTGARNV 876 Query: 705 ARVIQDNLKKPLANELLF 722 ++ +L LA LL Sbjct: 877 DHTLRASLMPALARTLLE 894 >UniRef50_Q2SB14 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SB14_HAHCH Length = 1093 Score = 347 bits (890), Expect = 8e-94, Method: Composition-based stats. Identities = 168/717 (23%), Positives = 303/717 (42%), Gaps = 39/717 (5%) Query: 26 TVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQ 85 +VEHLL L P R L + ++ E P L++Q Sbjct: 60 SVEHLLW-LCFQPDYRFELIHLR--FKSGMHLVDGLF--AVAQYQVREHRYLCLPKLNYQ 114 Query: 86 RVLQRAVFHVQSSGRNEV--TGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTR 143 +L + + + + ES L + + + Sbjct: 115 TLLIPDDVETRPQLIEFLAGRIGVYIRSQRKADESFDIKRLYSQAGDSATTIGVSVNVEQ 174 Query: 144 KDEPTQSSDPG--SQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQV 201 D P + S S ++ + G ++ +L Q ++ + RE E + Sbjct: 175 SDFPFEQSAASLFSFFSASREFSGAYELKKTAEDLAQFYPDD-LEGSLHRESETVWLERA 233 Query: 202 LCRRRKNNPLLVGESGVGKTAIA-EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYR 260 L + ++VG GVGK+ + LA + DV ++ LD ++AG Sbjct: 234 LFSGKPQPVVIVGAPGVGKSNLIQHTLAQYMANSDVKAPERLQKLWLLDPLRVIAGMSVV 293 Query: 261 GDFEKRFKALLKQLEQD--------TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS 312 G++E+RF+A+L +++ T +L+ID + G +S + ++++KP L Sbjct: 294 GEWERRFEAILSWVKKRLQETYGIRTPDVLYIDNPVALFRIGKSSQTSLTLSHVLKPYLE 353 Query: 313 SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVR 372 +I ++ T E+ I + DR A FQ + + E+ QI + ++E ++ Sbjct: 354 RREIGLVLEATPYEWRRIQQLDRGFADLFQVLRLEPLPAEKLSQIYVRRRAQWEREYNCE 413 Query: 373 YTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVAR 432 ++A+ + L + D LP + V+ + + + + Sbjct: 414 IASQALLTLLGLEPGFRGDSALPGSVLSVLRDIAVKHQGRRAD-------EQAVYEAFQT 466 Query: 433 IARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFL 492 + + ++ + + + GQ +A + LT+ + +A L KP+ + L Sbjct: 467 NFHFRKTLIDKNATLQENEVRRFFEQRLVGQPQAQDVLTDTVMTIKAQLTPLGKPLNTLL 526 Query: 493 FAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 F GPTGVGKTE L++ L L+R D++E+++ V RLIG G QGGLL Sbjct: 527 FIGPTGVGKTEAAKLLTQRLFNNSDCLVRIDLNEFVDAGAVHRLIGD-----GMGQGGLL 581 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGV 609 T+ V VLLLDEIEKAHP V ++LLQ++D+G LTD G+ DF V++MT+N G Sbjct: 582 TERVRYQKACVLLLDEIEKAHPKVHDLLLQLLDDGRLTDAMGKTTDFTQTVVIMTSNIGA 641 Query: 610 RETERKSIGLIHQDNSTDA--MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 +E + G H + A + +++ F PE NR+++I+ F+ L + ++ + Sbjct: 642 KEAASR-FGFSHHSDDNAATYRKSVEQFFRPEMINRINDIVVFNPLQHSDMQRLAQLHMQ 700 Query: 668 ELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 L + ++ L + N LA+ +D +GAR + R ++ + A L Sbjct: 701 RLLERDGFIRRSTILNIDPACLNRLADASFDPLLGARALKRNLERVITHLTAQRLAE 757 >UniRef50_Q8NPQ1 ATPases with chaperone activity, ATP-binding subunit n=1 Tax=Corynebacterium glutamicum RepID=Q8NPQ1_CORGL Length = 655 Score = 347 bits (890), Expect = 9e-94, Method: Composition-based stats. Identities = 160/599 (26%), Positives = 272/599 (45%), Gaps = 53/599 (8%) Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 + Q E +LN+ + P + R+ +++ + +L + K N LLVG +G G Sbjct: 69 QPQQQSAPNDETRFIDLNERHKDDE--PALFRDDVIDQTLAILISKNKPNALLVGPAGTG 126 Query: 220 KTAIAEGLAWRIVQGDV--PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ- 276 K+ IAE +A R+ DV P+ + I + I L+AG G E+R L+K Sbjct: 127 KSRIAEDIARRLANDDVSIPDQLVGHRILDVSIAELVAGAGVVGQLEERILDLIKYATDP 186 Query: 277 DTNSILFIDEIHTIIGAGAASGGQVD-AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDR 335 I+FIDEIH I G ++ G A ++KP L+ G +RVIG+TT QE + F+ D Sbjct: 187 SNKVIIFIDEIHQIAGDQSSHSGSQAKVAQILKPYLARGDLRVIGATTTQE-ARDFDHDP 245 Query: 336 ALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD--VRYTAKAVRAAVELAVKYINDR- 392 AL RRF ++++ E ++T+ I++ + Y H + V + + + ++ Sbjct: 246 ALKRRFSRVNVDEFDRDQTLTILHAARDGYLKHFNNAVTVSDDVLGYVYTYSQQFNPGNT 305 Query: 393 HLPDKAIDVIDEAGARARLMPV------------SKRKKTVNVADIESVVARIARIPEKS 440 PD A+ + D+A A + ++ + +A +++P Sbjct: 306 AQPDAALTLFDKALASLTMEKQRLINNHVIAPSLKFPVSERHIHNTARKLAFGSQVPASI 365 Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 + RD L +FGQD IE + AIK + G+ KP+ S++FAG +GVG Sbjct: 366 NTDDARDKL--------ETLFGQDHIIEPVLTAIKREQLGIFPRTKPL-SWVFAGSSGVG 416 Query: 501 KTEVTVQLSKAL-GIELLRFDMSEYMERHTVSRLIGAPPGYVGF-DQGGLLTDAVIKHPH 558 KTE+ LS+A+ G + + + EY+ +++ LIG+ GY+G + D +I +P Sbjct: 417 KTEMARILSRAINGGDPIIINGPEYISPESITGLIGSSDGYIGSNSKRAKPLDPLISNPR 476 Query: 559 AVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG 618 V++LDE EK+HP + + +D GT+ NG +F +++ TTNA + R S G Sbjct: 477 QVIVLDEFEKSHPHFQQLFMAALDTGTMAMANGTTLNFSQAIIIATTNAARDKIGRDSFG 536 Query: 619 LIHQDN--------------STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 ++ + K F E NR NI F+ + +++D Sbjct: 537 FDSDNSGVLGSAQAATDPRAQERLKSLMSKDFPVELLNRFQNIFAFNRIDAGTYREILDN 596 Query: 665 FIVE------LQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 L + ++ + + L E + GARP AR I+D++ L Sbjct: 597 LYQRRRDAVLLSHPHYAAQIPADIDSDTLDQLVETTFISDFGARPAARTIEDHIASLLM 655 >UniRef50_A6GDL2 ClpA/B family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDL2_9DELT Length = 806 Score = 347 bits (890), Expect = 9e-94, Method: Composition-based stats. Identities = 152/571 (26%), Positives = 252/571 (44%), Gaps = 48/571 (8%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 R + LLVG GVGK+ E LA + I+S ++AG Y G + Sbjct: 221 RETPASILLVGGPGVGKSTWIEALAREFSRRRKGATGTSPRIWSTSAERIIAGMMYLGQW 280 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTT 323 E+R ++ +L + + L + ++ ++ G+ A+ P + +G + +I Sbjct: 281 EQRCLDIIHELSHEGD-YLDVGQLPALLDTR---TGRSSIADFFLPAIEAGDLSLIAECH 336 Query: 324 YQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVE 383 +E+ + + L F I I S ++ + + + +A+R V+ Sbjct: 337 PREYEQLKTRAPVLLAAFNVIPIAPTSTTAMPGLLRAYQGRVNP--RLELRPEALRRVVQ 394 Query: 384 LAVKYINDRHLPDKAIDVID---------EAGARARLMPV-------------------- 414 + D P K +D E A + Sbjct: 395 HLELFRRDTCFPGKGFRFLDWLNQQYGHDELAALTQRPSPSPSSSPSQDAAEPPPATGRS 454 Query: 415 -SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 + + D + +R +P + +S+ + L RL+ V GQDKA Sbjct: 455 GEEPSTVLRGPDASAAFSRYTGLPLELISEETVAGPEQLAARLREGVVGQDKAAATAARV 514 Query: 474 IKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTV 530 + +AGL +PVGS F GPTGVGKTE+ QL++ + + ++R DMSEYM + Sbjct: 515 LARFKAGLDDPERPVGSLFFVGPTGVGKTELAKQLARYMFGDADRMIRLDMSEYMLGGSA 574 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 R++ PG L + V + P +++LLDEIEKAHP+VF++LL V+ G +TD Sbjct: 575 QRMLAVGPG------VESLAERVRRQPLSLILLDEIEKAHPEVFDLLLAVLGEGRMTDAA 628 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD-AMEEIKKIFTPEFRNRLDNIIW 649 G DFR ++VMT+N GV E G + +++ F PEF NR+D ++ Sbjct: 629 GSLVDFRMTLIVMTSNLGVSERGPAGFGGDDEGARERGFDAAVRRHFRPEFFNRIDFVVP 688 Query: 650 FDHLSTDVIHQVVDKFIVELQVQ--LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 F LS I ++V + + + L ++G+ LEVS+ AR LAE G+ GARP+ RV Sbjct: 689 FRSLSPADIQRIVGLELAAMAKRTGLARRGLRLEVSEAARATLAEWGWHPTRGARPLKRV 748 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKE 738 +++ + PL+ + + V V E Sbjct: 749 LEEQVMAPLSVLVARRPKLRDQSVWVRTHAE 779 >UniRef50_D2KTB1 BC18 (Fragment) n=1 Tax=Babesia caballi RepID=D2KTB1_BABCB Length = 1037 Score = 347 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 135/472 (28%), Positives = 224/472 (47%), Gaps = 22/472 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELE 59 + L ++ AR + +H+ L L + A + L V + R+ E Sbjct: 98 FSDNAVKVLMLSQEEARRAALNQIATKHIFQGLVCLDSGLAAQVLREFDVTVKKTREAAE 157 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + ER + + L+ + + G + ++L+ + + Sbjct: 158 TAASE-PSDTKEASGERLMTFSPDAKEALELSSAEAEHMGHTTIETEHILLGVLGSRSEG 216 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQS------------------SDPGSQPNSEE 161 A LL ++ V + + G + Sbjct: 217 MAQLLEALSLNADVVRKATLKYIEEHKEHSEDRAQQETWKQTLSQYSYIPAQGRAVEVTK 276 Query: 162 QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 A + FT +L + A G + ++ R+ E++RAI+ LCRR K NP+L+GE GVGKT Sbjct: 277 DAYAASPLGAFTVDLTEKAEQGKLQKVLCRDAEIDRAIRTLCRRHKRNPILIGEPGVGKT 336 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI 281 A+ EGLA +++ G + + + + LDIG ++AG ++RG FE+R L+++++ + I Sbjct: 337 AVVEGLAMQLLDGAMVPSLRNKRVKQLDIGLMVAGARFRGQFEERLTKLIEEVKAMGDVI 396 Query: 282 LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 L IDE H ++GAGA G +DAANL+KP L+ G+I+ I TT +E+ FEKD AL+RRF Sbjct: 397 LVIDEAHMLVGAGAGEGA-LDAANLLKPSLARGEIQCIAITTPREYRKYFEKDPALSRRF 455 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 Q I + EPS E+T +II Y H V+Y KAV AA++ + ++I DR LPDKA+D+ Sbjct: 456 QPIYVNEPSDEDTKKIIAATTESYGRFHRVKYDPKAVVAALKYSKQFIQDRFLPDKALDI 515 Query: 402 IDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLG 453 +DEAG+ A++ K + A E + + + D + Sbjct: 516 LDEAGSLAKMRFYEKSVSGHDYARNEGDLQANVGVACGEGTSGDVRMSVEIE 567 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 186/350 (53%), Gaps = 18/350 (5%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 V + + VV+ IP K +S+ + + ++N+ + + G ++A+E + +AI+ A A Sbjct: 654 EVGMEHVAEVVSTWTGIPLKKLSEDELEAMRNMEREIHKSIVGHEEAVEHICKAIRRATA 713 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG--IELLRFDMSEYMERHTVSRLIGAP 537 + +P+GSFLF GP GVGK+E+ L+K L L++ DMSEY E H++SR++G+P Sbjct: 714 KIKDPDRPIGSFLFCGPPGVGKSEIAKALTKFLFAKENLIKLDMSEYNEPHSISRILGSP 773 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGY G D GG LT+ + K P++V++ DEIEKAH DV N+LLQ++++G LTD+ + F+ Sbjct: 774 PGYKGHDAGGQLTEKLRKSPYSVVMFDEIEKAHRDVLNLLLQILEDGKLTDSRNQVVSFK 833 Query: 598 NVVLVMTTNAGVRETERKSIG----------------LIHQDNSTDAMEEIKKIFTPEFR 641 N V++MT+N G ER S G + EE+K F PE Sbjct: 834 NAVIIMTSNLGSNVIERASRGVHAFGFNVEEKVTDPKENYTKIKALVCEELKSQFKPELI 893 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 +R+D+II F L + Q+ I E + + G S+ +++ + D GA Sbjct: 894 DRIDDIILFRPLEEQQLRQIAVLMIEETVKRARENGFSVVADDAFVDYVLKLPRDEKGGA 953 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 RP+ R+I +L+ LA + V G + V ++ + ++ Sbjct: 954 RPLRRLITTSLEDKLAEFFISQEYVPGQRYRVTVEGTNVVIRRETDLGKE 1003 Score = 42.9 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 41/172 (23%) Query: 168 RMENFTTNLNQLARVGGID---PLIGREKELERAIQVLCR---------RRKNNPLLVGE 215 ++ + + + R + ++G E+ +E + + R R + L G Sbjct: 671 PLKKLSEDELEAMRNMEREIHKSIVGHEEAVEHICKAIRRATAKIKDPDRPIGSFLFCGP 730 Query: 216 SGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS----------LLAGTKYRGDFEK 265 GVGK+ IA+ L + + + LD+ L + Y+G Sbjct: 731 PGVGKSEIAKALTKFLFAKE--------NLIKLDMSEYNEPHSISRILGSPPGYKGHDAG 782 Query: 266 RFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 L ++L + S++ DEI D NL+ +L GK+ Sbjct: 783 --GQLTEKLRKSPYSVVMFDEI---------EKAHRDVLNLLLQILEDGKLT 823 >UniRef50_Q2SB15 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SB15_HAHCH Length = 1101 Score = 347 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 146/585 (24%), Positives = 248/585 (42%), Gaps = 28/585 (4%) Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 + G + ++ + L + + L+VG SG GKTA+ R G Sbjct: 191 TARRMHRSRASVFGLDAYVDTLNRNLLGEFRQSVLVVGPSGCGKTALINEFVKRHFTG-- 248 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA 296 V ++ + +L +G + +++ + I+++ + + G Sbjct: 249 --VNSNKIPWRTTAAQMLQALTQQGGWRHALGLWVREARTNGE-IIYLGNLSELFEVGQY 305 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 G V A ++ LS ++ +I T ++ + I + ++ F + TE EE Q Sbjct: 306 QGNSVSIAEALRDPLSRNEVTLIAEVTEEQLAAIDLRAPGYSQLFHIVRFTERGEEEENQ 365 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 I ++R A+ + L +Y P K I + AR + Sbjct: 366 IARQAIQAQADLFNIRIAPNAIERIILLQRRYAPYSGYPGKIIRFFENMILAARKDNGAI 425 Query: 417 RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM 476 + A E + +P V R + + + + GQ +A+EAL AI Sbjct: 426 SENEAISASCEE-----SGMPRFLVDHQARLDADKVREHFRRRIVGQTQAVEALVRAIIT 480 Query: 477 ARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRL 533 +AGL KP+ S LF GPTGVGKTE+ L++ + + LLRFDMSEY + ++V+RL Sbjct: 481 VKAGLAPRGKPIASLLFVGPTGVGKTEMAKTLAQFMFGDEKRLLRFDMSEYSDPYSVTRL 540 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 L V + P +VLL DEIEKA P +++LLQV+ G LTD++G Sbjct: 541 TATG--------EASLVTKVRQQPFSVLLFDEIEKADPAFYDLLLQVLGEGRLTDDHGES 592 Query: 594 ADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE-----IKKIFTPEFRNRLDNII 648 A+F + +++MT+N G ++ + S+G +D + A + K F PE NR+D + Sbjct: 593 ANFCSALIIMTSNLGAQQFMQNSVGFSTEDKTDAAAQRHFEQTAAKYFRPELFNRIDQVA 652 Query: 649 WFDHLSTDVIHQVVDKFIVELQ--VQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMAR 706 F L+ V+ K + LQ L + VSL + L D GAR + R Sbjct: 653 PFFALTQAEQMIVLQKEMRRLQGAAGLSNRQVSLNFEDPVWSHLNNLPSDPRYGARSVQR 712 Query: 707 VIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 +++ ++ LA L D ++T + + +K Sbjct: 713 LLRKHVTAHLAPALSARPHEDPLEITATVSADALSFDARVTHQEK 757 >UniRef50_A6G5U6 AAA ATPase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5U6_9DELT Length = 742 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 184/729 (25%), Positives = 305/729 (41%), Gaps = 64/729 (8%) Query: 31 LLALLS--NPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVL 88 LLA++ + A +AL D+V LR+ L + + R S Sbjct: 53 LLAIVRSADCHAYQALRLAGADMVRLRKLLIERVRERGRERATRGPVRGRSHPGSPSSSS 112 Query: 89 QRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV----SRLDVVNFISHGTRK 144 + + S A+ S + +H + + Sbjct: 113 PVRMSSTRRS-----------AALSSRPAPPSPRQSHQHGAPYPAQPEPAPSQREPMALR 161 Query: 145 DEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCR 204 + + S+ + P E R + L + G + PL+GRE+EL L R Sbjct: 162 PDASASTLAKATPAPEVHERSAPRTQKGPAELRSIHP-GSLPPLVGRERELATLADALLR 220 Query: 205 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 R PLLVGE G G+T +A LA + D P + Y D Sbjct: 221 RGPRPPLLVGEHGSGRTCVATHLARVL---DRPVFRLEAPHYDED--------------- 262 Query: 265 KRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS----GKIRVIG 320 +L + ++ D++ + D + P L+ G+ R++ Sbjct: 263 DNLLGEDLELIAEAQGVVVFDDLDRV---------SSDQPPAMLPALARAWATGQPRILT 313 Query: 321 STTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA-VR 379 +++ + + + + ++ + Q + P H + A + Sbjct: 314 VVSHESRARLEAWMPGILDTLDVLPLSALEGGDVHQAVKLAAPAVLEQHGLGLDNDAHLH 373 Query: 380 AAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEK 439 +A +++ +P +A+D++D + AR + V ++V +P Sbjct: 374 ELTRIAERFLTGLAMPGRALDLLDLSCARTTREGRAS----VGRDTWLTIVCERTGLPRS 429 Query: 440 SVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGV 499 V S L +L L V G + +EAL ++ RAG +P+ S L GP+GV Sbjct: 430 RVEGSSERDLLDLDAVLARQVVGHEHVLEALASLVRRNRAGFS-SGRPIASVLLLGPSGV 488 Query: 500 GKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKH 556 GKTE+ L+ AL LLR DMSEY E H V+R++GAPPGYVG +QGG LTD ++++ Sbjct: 489 GKTEIAKALASALYERDDALLRLDMSEYAEAHAVARVVGAPPGYVGHEQGGALTDPLLRN 548 Query: 557 PHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKS 616 PH V+LLDEIEK+H DV +LLQV D G LTD GR DFR+ V++MT+N G Sbjct: 549 PHRVVLLDEIEKSHRDVHQLLLQVFDEGRLTDGRGRTIDFRHAVVIMTSNLGAELMFDLD 608 Query: 617 IGL----IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ 672 +G + + ++ + F E NR++ + L+ + + + + I + Sbjct: 609 LGPNGDGDALPDDAEVLDRARSHFPVELWNRIEAPLVLRPLTREQMLAISRRLIASSSKR 668 Query: 673 L-DQKGVSLEVSQEARNWLAEK-GYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ 730 L +G+ V E L E+ G D A+GARP+ +I ++ +A+E+L G + G + Sbjct: 669 LTRDRGIRYRVEDEVLERLIERAGIDPALGARPLRHLIGREVESLVADEILRGRVRAGEE 728 Query: 731 VTVALDKEK 739 V V D+ Sbjct: 729 VVVRFDERG 737 >UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=HSP98_NEUCR Length = 927 Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 160/472 (33%), Positives = 252/472 (53%), Gaps = 24/472 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS---NPSAREALEACSVDLVALRQEL 58 + +L A A A ++ H + HL +ALL +PS + RQ + Sbjct: 7 FTDRAKKALEDAMALAEQYAHSQLLPVHLAVALLDPLPDPSKDQQNAPAGATSSLFRQVI 66 Query: 59 EAF----------IEQTTPVLPASEEERD-TQPTLSFQRVLQRAVFHVQSSGRNEVTGAN 107 E +++ LP+ + D SF VL++A ++ + + Sbjct: 67 ERAHGDPQLFDRALKKALVRLPSQDPPPDHVSMAPSFHTVLRKANELQKTQKDTYIAVDH 126 Query: 108 VLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEE 167 ++ A+ E L++ + + +V R + S + ++ E Sbjct: 127 LITALAEEPS--IMNALKEANIPKPKLVTDAIQAIRGTKRVDSRNADTEEEHEN------ 178 Query: 168 RMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGL 227 + FT ++ +AR G IDP+IGRE+E+ R I++L RR KNNP+L+GE GVGKT + EGL Sbjct: 179 -LAKFTIDMTAMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTVVEGL 237 Query: 228 AWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN-SILFIDE 286 A RIV DVP+ +A+C + SLD+G+L+AG+KYRG+FE+R K +LK++ + ILFIDE Sbjct: 238 AQRIVNADVPDNLANCKLLSLDVGALVAGSKYRGEFEERMKGVLKEISESKEMIILFIDE 297 Query: 287 IHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 IH ++GAGA+ G +DAANL+KP+L+ G++ IG+TT E+ EKD A RRFQ++ + Sbjct: 298 IHLLMGAGASGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVIV 357 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAG 406 EPS+ ET+ I+ GLK KYE HH V + A+ AA LA +Y+ R LPD AID+IDEA Sbjct: 358 KEPSVSETISILRGLKEKYEVHHGVTISDAAIVAAANLAARYLTSRRLPDSAIDLIDEAA 417 Query: 407 ARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 A R+ S+ + ++ + + ++ + L+ + Sbjct: 418 AAVRVARESQPEIIDSLERKLRQLKIEIHALSREKDEASKARLEQAKKDAEN 469 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 149/453 (32%), Positives = 236/453 (52%), Gaps = 30/453 (6%) Query: 332 EKDRALARRFQKIDITEPSIEETVQIINGL----KPKYEAHHDVRYTAKAVRAAVELAVK 387 EKD A R ++ ++EE ++ + K + +A + R +++R E A + Sbjct: 451 EKDEASKARLEQAKKDAENVEEELRPLREKYEQEKQRAKALQEARMKLESLRQKAEEASR 510 Query: 388 ---YINDRHLPDKAIDVIDEAGARARLMPV---------------SKRKKTVNVADIESV 429 + L AI + R + V I + Sbjct: 511 MGDHSRAADLQYYAIPEQEAVIKRLEKEKAAADAALNAAAAETGGAMITDVVGPDQINEI 570 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 VAR IP + S+++ L ++ L +V GQ +A+++++ AI++ R+GL + ++P Sbjct: 571 VARWTGIPVTRLKTSEKEKLLHMEKHLSKIVVGQKEAVQSVSNAIRLQRSGLSNPNQPP- 629 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 SFLF GP+G GKT +T L++ L + ++RFDMSEY ERH++SR+IGAPPGYVG D G Sbjct: 630 SFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRFDMSEYQERHSLSRMIGAPPGYVGHDSG 689 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G LT+A+ + P ++LL DE+EKA +V +LLQ+MD+G +TD GR D RN ++VMT+N Sbjct: 690 GQLTEALRRKPFSILLFDEVEKAAKEVLTVLLQLMDDGRITDGQGRVVDARNCIVVMTSN 749 Query: 607 AGVRETERKS--IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 G R + G I M ++ F PEF NR+ +I+ F+ L+ I ++V+ Sbjct: 750 LGAEYLSRPNAKDGKIDPTTRELVMNALRNYFLPEFLNRISSIVIFNRLTRREIRKIVEL 809 Query: 665 FIVELQVQLD--QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 I E+Q +L + V +EVS+EA++ L GY A GARP+ RV++ + LA +L Sbjct: 810 RIAEIQKRLQDNDRNVKIEVSEEAKDKLGALGYSPAYGARPLQRVLEKEVLNRLAVLILR 869 Query: 723 GSLVDGGQVTVALDKEKNELTYGFQSAQKHKAE 755 GS+ DG V + K + E Sbjct: 870 GSIRDGEVARVVVQDGKITVLPNHPEVNDEDDE 902 >UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding subunit n=3 Tax=Burkholderia RepID=C5ALE8_BURGB Length = 933 Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 154/518 (29%), Positives = 241/518 (46%), Gaps = 35/518 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLAL--LSNPSAREALEACSVDLVALRQELE 59 L L SL A ++ + ++ + H L L L++ + + C +D L ++L+ Sbjct: 12 LGTTLFRSLESATTFSKLRGNPYVELVHWLHQLIALADGDLQRIVRHCEIDRARLDRDLQ 71 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQS-SGRNEVTGANVLVAIFSEQES 118 + S + + ++RA G + + GA ++ A+ E Sbjct: 72 DALAALP-----SGAGSLSDFSHHVDAAIERAWVLATLVFGEHRIRGAWLMAALIETPEL 126 Query: 119 QAAYLLRKHEVSRLD---VVNFISHGTRKDEPTQSSD----------PGSQPNSEEQAGG 165 + L E R+ + + + PG ++ Sbjct: 127 RRVLLSCSREFGRIPVDGLHEALPAWIAGSPEADDTPYDHSDFSPAVPGEASDAMAAPAR 186 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 +E F +L A G IDP++GR+ E+ + VL RRR+NNPLL G++GVGKTA+ E Sbjct: 187 GSSLEQFCADLTARALKGEIDPVVGRDIEIRTMVDVLLRRRQNNPLLTGDAGVGKTAVVE 246 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFI 284 GLA I +GDVP +A+ + +LD+G+LLAG RG+FE R K++++ + ILFI Sbjct: 247 GLALAIARGDVPPKLAEVRLLNLDVGALLAGASMRGEFEARLKSVIEAAGKAPVPVILFI 306 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DEIHT+IGAG +G DAANL+KP L+ G +RVIG+TT+ E+ EKD AL RRFQ + Sbjct: 307 DEIHTLIGAGGQAGTG-DAANLLKPALARGTLRVIGATTWAEYKRHIEKDPALTRRFQVL 365 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EP V ++ GL + HH V +AVRA+V L+ +Y+ R LPDKAI ++D Sbjct: 366 QVAEPEPGAAVDMVRGLVGTFSRHHGVVVLDEAVRASVMLSHRYLPSRQLPDKAISLLDT 425 Query: 405 AGARARLMPVSKRKKTVNVADIESV---------VARIARIPEKSVSQSDRDTLKNLG-- 453 A AR L + ++ + R I + + + L Sbjct: 426 ACARVALSQHAPPRELQYLRQQLEAARIESALLDAERRVGIGDGASWSEVAQRIAELEVQ 485 Query: 454 -DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGS 490 ++ Q +A+ AL EA +P G Sbjct: 486 ARDIEQAWQAQVEAVRALLEARAETEGEDERGGEPDGG 523 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 103/326 (31%), Positives = 166/326 (50%), Gaps = 9/326 (2%) Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V+ A + ++++ IP + + ++ L + L V GQ A+ + E I+ AR Sbjct: 576 PEVSEAMVAAIISDWTGIPVGRMVTDEIAAVRRLSETLSARVVGQTDALRQIAERIQTAR 635 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIG 535 AGL KP+G FL GP+GVGKTE + L++AL L+ +MSEY E HTVS L G Sbjct: 636 AGLADPAKPLGVFLLTGPSGVGKTETALALAEALYGGEQNLITINMSEYQEAHTVSSLKG 695 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGYVG+ +GG+LT+AV + P++V+LLDEIEK+H DV + QV D G + D +GR D Sbjct: 696 APPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKSHSDVKEMFFQVFDKGYMEDGDGRYID 755 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE----IKKIFTPEFRNRLDNIIWFD 651 FRN +++T+N G S + K F F R+ ++ F Sbjct: 756 FRNTTILLTSNVGAELLTSLCADEALAPESDALRMALGPVLLKAFPAAFLGRVT-VVPFR 814 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L+ + Q+ ++ + ++ GV L + +++ + + GAR M I+ Sbjct: 815 PLAQGSLVQIARLYLDRVARRMADHHGVELVYAPAVADYVVARCLVQETGARLMIGFIEQ 874 Query: 711 NLKKPLANELLFGSLVDGGQVTVALD 736 +L L+ L + + + ++ Sbjct: 875 HLLPALSRHWLDALISNRRLARIEIE 900 >UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular organisms RepID=Q4FXS7_LEIMA Length = 867 Score = 346 bits (886), Expect = 3e-93, Method: Composition-based stats. Identities = 158/459 (34%), Positives = 250/459 (54%), Gaps = 21/459 (4%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEA 60 Q + A AR+ + ++ HL + + + A + +++ LEA Sbjct: 9 TQAASDLMARMAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLGA--ASVKDGLEA 66 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 ++ +PA +P RV+ A + G + + L+A+ +E Sbjct: 67 RVDAIPTQMPA---PTQPRPNSDMMRVMNTAEQERAALGDTLMAADHFLLALHESKE--V 121 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 +L + + + + G + S+ Q E + + +L + A Sbjct: 122 GRILDAAGAGKKAIRATLLEMRK----------GKKITSDFQDDNYESLNKYAVDLCKQA 171 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 G +DP+IGR E+ R I+VL RR KNNP+L+GE GVGKTAI EG+A ++V+GDVP+ + Sbjct: 172 EDGKLDPVIGRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTL 231 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN-SILFIDEIHTIIGAGAASGG 299 + I+SLD+G+L+AG KYRG+FE+R KA+L ++++ N ILFIDEIH ++GAG + G Sbjct: 232 SGIRIFSLDMGALIAGAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGA 291 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +DAANL+KPLL+ G++R IG+TT +E+ EKD A RRF + + EPS+EE I+ Sbjct: 292 -MDAANLLKPLLARGELRTIGATTLEEYRQYVEKDAAFERRFMPVQVHEPSVEECTSILR 350 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLK +YE HH V+ T KAV A +LA +YI +R LPDKAID+IDEA A R+ S+ + Sbjct: 351 GLKDRYEQHHGVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAE 410 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 + + + R ++ S ++ LK + ++ Sbjct: 411 IDALERKKRQLEIEERALQRDKDASAKERLKAVKAEIQK 449 Score = 337 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 202/798 (25%), Positives = 341/798 (42%), Gaps = 73/798 (9%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF- 61 N ++ +N A M +H LLAL + L+A A+R L Sbjct: 84 NSDMMRVMNTAEQERAALGDTLMAADHFLLALHESKEVGRILDAAGAGKKAIRATLLEMR 143 Query: 62 ----------------IEQTTPVLPASEEERDTQPTL-SFQRVLQRAVFHVQSSGRNEVT 104 + + L E+ P + +L+ + + N V Sbjct: 144 KGKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVIGRADEILRTIRVLSRRTKNNPVL 203 Query: 105 GAN-------VLVAIFSEQ-ESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQ 156 ++ I + L + LD+ I+ + E + Sbjct: 204 IGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLDMGALIAGAKYRGEFEERLKAVLN 263 Query: 157 PNSEEQAGGEERMENFTTNLNQLARVGGID------PLIGREK----------ELERAIQ 200 E ++ L G +D PL+ R + E + ++ Sbjct: 264 EVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKPLLARGELRTIGATTLEEYRQYVE 323 Query: 201 ---VLCRRRKNNPLLVGESGVGK-TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAG 256 RR P+ V E V + T+I GL R Q + D + + + LAG Sbjct: 324 KDAAFERRFM--PVQVHEPSVEECTSILRGLKDRYEQHHG-VQITDKAVV---VAAQLAG 377 Query: 257 TKYRGDF-EKRFKALLKQLEQDTNSILFID--EIHTIIGAGAASGGQVDAANLIKPLLSS 313 F + L+ + + L EI + + A K + Sbjct: 378 RYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQLEIEERALQRDKDASAK 437 Query: 314 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 +++ + + E + EK L ++++ + + + K + + Sbjct: 438 ERLKAVKA----EIQKVEEKLGPLLAKYEQ-------ERGRIDELQATQAKLDEK---KV 483 Query: 374 TAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 433 + ++ ++ D I + + TV DI +VV+R Sbjct: 484 KLERAERMRDMETAADLKYNVIPILQDRIRSLKEAIEKQKATMLQGTVTETDIATVVSRW 543 Query: 434 ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLF 493 IP +SQ++R+ L +L D+L + V GQD+A+ + EAI +RAGL +P GSFLF Sbjct: 544 TNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTGSFLF 603 Query: 494 AGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLT 550 GPTGVGKTE++ ++ L + ++R DMSEYME+H+V+RLIGAPPGYVG ++GG LT Sbjct: 604 LGPTGVGKTELSKAVASELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGGQLT 663 Query: 551 DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR 610 + V + P+ V+LLDE+EKAHP+VFN+LLQV+D+G LTD++GR DF N +++MT+N G + Sbjct: 664 EPVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVDFCNTIIIMTSNLGAQ 723 Query: 611 ETERKSIGLIHQDN-STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 + + M E++K F PEF NRLD+II F L + ++D EL Sbjct: 724 YLQNMDTSPKAYEVAQAQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLITEEL 783 Query: 670 QVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGG 729 +L + + + +++EA+ ++ E +D MGARP+ R ++ N+ L+ ++ L Sbjct: 784 NGRLKDQSIRVSLTEEAKQYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELSPNS 843 Query: 730 QVTVALDKEKNELTYGFQ 747 V V L +L++ + Sbjct: 844 TVKVTLSSNHKKLSFSVK 861 >UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=Gammaproteobacteria RepID=Q88IA4_PSEPK Length = 878 Score = 344 bits (883), Expect = 7e-93, Method: Composition-based stats. Identities = 153/447 (34%), Positives = 235/447 (52%), Gaps = 18/447 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 LN+ + A A H + VEHLLL LL N L V L+ +L Sbjct: 23 LNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVVAERLQAQLV 82 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQES 118 + R + R++++A G +V A++L A+ + E Sbjct: 83 TALGTFKK-----GNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLDDAEL 137 Query: 119 QAAYLLRKHE---VSRLDVVNFISHGTRKDEPTQSSDPGSQP-----NSEEQAGGEERME 170 + + E ++ D+ ++ ++ + P + P S + +G ++ Sbjct: 138 RRVVIASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVSTSSKASGKTPALD 197 Query: 171 NFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWR 230 +T NL Q AR G IDP++GRE E+ + + +L RRR+NNP+L GE+GVGKTA+ EGLA R Sbjct: 198 QYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLALR 257 Query: 231 IVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHT 289 I QGDVP V+ D +++LD+G L AG +G+FE R KA+++++++ ILFIDE HT Sbjct: 258 IAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFIDEAHT 317 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 +IG+G + GQ DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ + + EP Sbjct: 318 LIGSGGQA-GQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEP 376 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 ++ + ++ GL K HH V +A+ AV L+ +YI R LPDKA+ V+D A AR Sbjct: 377 DEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTACARI 436 Query: 410 RLMPVSKRKKTVNVADIESVVARIARI 436 L S + + + Sbjct: 437 ALAQSSLPGALEDCRRQIDNLQAEIDV 463 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 172/329 (52%), Gaps = 10/329 (3%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I V++ IP + + + DT++ L L V GQD A+ + + IK++RA + + Sbjct: 549 IAQVISGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIGKRIKISRARMEDPN 608 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVG 542 KP+G FL GP+GVGKTE + L+ L L+ +MSEY E HTVS L G+PPGYVG Sbjct: 609 KPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHTVSSLKGSPPGYVG 668 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 + +GG+LT+AV + P++V+LLDE+EKAHPDV + QV D G L D GR+ +FRN V++ Sbjct: 669 YGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFRNTVII 728 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKK----IFTPEFRNRLDNIIWFDHLSTDVI 658 +T+N G + + +E+++ +F P F RL +I+ F + ++ Sbjct: 729 LTSNTGTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFLGRL-SIVPFYPVQDQIL 787 Query: 659 HQVVDKFIVELQVQLDQ-KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 ++V + + + + L Q +A + + GAR + ++ L LA Sbjct: 788 ERIVALKLERIAKRFARNHQAELSYDQALVKAIAARCTEVDSGARNIDNILSQTLMPELA 847 Query: 718 NELLFGSLVDGGQVTVALD-KEKNELTYG 745 +L D +A++ + Y Sbjct: 848 QRVLERMAQDAPIQHLAIELGSDGDFAYR 876 >UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteobacteria RepID=A6VUK5_MARMS Length = 873 Score = 342 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 151/472 (31%), Positives = 245/472 (51%), Gaps = 15/472 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 LN + +L+L A A E +H +++EH L LL NP + + + +++ Sbjct: 13 LNSQSKLALEQAAALCIERQHHEVSIEHFLSVLLENPMSDVCVIFDH----VKLGKDDIQ 68 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHV-QSSGRNEVTGANVLVAIFSEQES 118 A I ++ P ++ + + ++Q A + E+ +L+A + Sbjct: 69 AAISKSYPR--STTLDTYPPFSPLLVELMQEAWLLSSTELNQTELRSGAILLASLIHPDR 126 Query: 119 QAAY----LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTT 174 ++ L K + + + SD + S A G + F T Sbjct: 127 YYSFEMIGLFEKINKEAIRKNFDLVLERSSESDHVVSDSQDKSTSSSVAAGNSALGKFCT 186 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 N+ A+ +DP++ RE EL + +LCRRRKNNP++VGE+GVGK+A+ EGLA RIV G Sbjct: 187 NVTLQAKNDELDPVLCREDELNLMVDILCRRRKNNPIVVGEAGVGKSAVVEGLALRIVAG 246 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGA 293 +VP+ +A+ I+SLD+G L AG +G+FEKR K ++ +++ ILFIDE HT+IG+ Sbjct: 247 NVPDKLANVEIHSLDLGLLQAGASIKGEFEKRLKGIIDEIKSSPVPIILFIDEAHTLIGS 306 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G GG DAANL+KP L+ G++ I +TT++E+ FEKD AL RRFQ + + EPS+ + Sbjct: 307 GNQEGGS-DAANLLKPALARGELSTIAATTWKEYKKYFEKDPALTRRFQLVKVEEPSVSQ 365 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 +V I+ GL YE H V A++A+ EL+ +Y++ R LPDKAIDV+D A AR + Sbjct: 366 SVDIMRGLHHVYEKAHGVLIHDDALKASSELSARYLSGRQLPDKAIDVLDTACARIAINI 425 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDK 465 + K + + R + ++ L +++ V + + Sbjct: 426 STPPKVLGQLENQCCTRQREIDMLKRQALIGQPVDNDYLESLIELEVQAELE 477 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 110/367 (29%), Positives = 179/367 (48%), Gaps = 13/367 (3%) Query: 391 DRHLPDKAIDVIDEAGARARLMPVSKRK------KTVNVADIESVVARIARIPEKSVSQS 444 D L D +D + E A + VN I V++ +P ++ Sbjct: 510 DEALSDDELDELREQLAASYQELEQIPHHERLMYPEVNAQQIAEVISDWTGVPIDQMNSD 569 Query: 445 DRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEV 504 + + +L + L + GQD AIE + + +RA L +P G+FL GP+GVGKTE Sbjct: 570 ELHKITHLPEILNAKIKGQDVAIECVHRHLLTSRADLRRPGRPKGAFLLVGPSGVGKTET 629 Query: 505 TVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVL 561 +QL++ L L +MSEY E+HTVSRLIG+PPGYVGF +GG+LT+A+ K P++V+ Sbjct: 630 VIQLAEELYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVGFGEGGVLTEAIRKKPYSVV 689 Query: 562 LLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH 621 LLDE+EKAHP+V N+ Q D G L D GR D +N++ +T+N G + Sbjct: 690 LLDEVEKAHPEVLNLFYQAFDKGELADGEGRLIDCQNILFFLTSNLGYQTIVDNV--ETP 747 Query: 622 QDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK-GVSL 680 ++ E+ F P R+ I+ + L+ DV+ ++V + L+ L ++ + Sbjct: 748 KEIEAKLYPELVPFFKPALLARM-EIVPYLPLNKDVLEKIVLGKLSSLEKLLRKRYSAEV 806 Query: 681 EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 E+ + + GAR + +I+ + P++ LL + + E+ Sbjct: 807 EIDPALVQEILNRATRSENGARMLEAIIEGQVLPPISLALLNRLAEQQPVSRIFMTIEEG 866 Query: 741 ELTYGFQ 747 E + Sbjct: 867 EFVGEIE 873 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 70/404 (17%), Positives = 136/404 (33%), Gaps = 57/404 (14%) Query: 33 ALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQR-- 90 AL+ P + LE+ + E++A +E+ T + S+++ + + ++ + R Sbjct: 453 ALIGQPVDNDYLESL------IELEVQAELEKETLLNSWSKQKEIIEKIIDIRQSILRNP 506 Query: 91 -AVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQ 149 A S + + + ++ L EV+ + IS T Sbjct: 507 VADDEALSDDELDELREQLAASYQELEQIPHHERLMYPEVNAQQIAEVISDWTGVPIDQM 566 Query: 150 SSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNN 209 +SD + + ++ + R RA R K Sbjct: 567 NSDELHKITHLPEILNA-----------KIKGQDVAIECVHRHLLTSRADLRRPGRPKGA 615 Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL--DIGSLL-AGTKYRGDFEKR 266 LLVG SGVGKT LA + G + + Y + L+ + Y G E Sbjct: 616 FLLVGPSGVGKTETVIQLAEELYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVGFGEGG 675 Query: 267 FKALLKQLEQDTNSILFIDE-----------IHTIIGAGAASGGQ---VDAANLIKPLLS 312 L + + + S++ +DE + G + G+ +D N++ L S Sbjct: 676 V--LTEAIRKKPYSVVLLDEVEKAHPEVLNLFYQAFDKGELADGEGRLIDCQNILFFLTS 733 Query: 313 SGKIRVIG--STTYQEFSNIFEKD------RALARRFQKIDITEPSIEETVQIING---- 360 + + I T +E + AL R + + + + +I+ G Sbjct: 734 NLGYQTIVDNVETPKEIEAKLYPELVPFFKPALLARMEIVPYLPLNKDVLEKIVLGKLSS 793 Query: 361 ----LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 L+ +Y A V V+ + A + N + + I+ Sbjct: 794 LEKLLRKRYSAE--VEIDPALVQEILNRATRSENGARMLEAIIE 835 >UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=Bacteria RepID=A9BLL0_DELAS Length = 928 Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats. Identities = 144/511 (28%), Positives = 234/511 (45%), Gaps = 34/511 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 LN L SL A + + ++ + H L LL ++ L + L ++ Sbjct: 28 LNPLLFKSLEGATVFCKLRGNPYVELVHWLHQLLQENDCDLIRILRHFDIASDRLAADVL 87 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSS-GRNEVTGANVLVAIFSEQES 118 ++Q + + + ++R + +++ A +L + + Sbjct: 88 RRLDQLPR-----GATSISDFSEHIETAIERGWVYATLMFNDSQIRSAYLLSGMVRTRSL 142 Query: 119 QAAYLLRKHEVSRLD---VVNFISHGTRKDEPT----------QSSDPGSQPNSEEQAGG 165 E ++ + + + + + + + G Sbjct: 143 ANELRSISREFDKISEPALSDAFARLLPDSPEARMRAADGSGLEGTPGEASQATGAAPGQ 202 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 ++ +T +L A+ G +DP+ GR+ E+ + + +L RRR+NNP+LVGE+GVGKTA+ E Sbjct: 203 GGALQQYTVDLTARAKAGELDPVTGRDDEVRQMVDILLRRRQNNPILVGEAGVGKTAVVE 262 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFI 284 GLA RI QGDVP + + LD+G L AG +G+FE R + LL ++ T +LFI Sbjct: 263 GLALRIAQGDVPPPLQGVELRVLDVGLLQAGASMKGEFENRLRGLLDAVQSSTTPIVLFI 322 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DE+HT++GAG +G DAANL+KP L+ G +R IG+TT+ E+ EKD AL RRFQ + Sbjct: 323 DEVHTLVGAGGQAGTG-DAANLLKPALARGTLRTIGATTWAEYKKYIEKDPALTRRFQLV 381 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EP V ++ G+ K E HH VR A AV AAV L+ +YI R LPDKA+ ++D Sbjct: 382 QVHEPDEPRAVDMLRGVAAKLENHHQVRIAADAVAAAVSLSHRYIPSRQLPDKAVSLLDT 441 Query: 405 AGARARLMPVSKRKKTVNVADIESVV---------ARIARIPEKSVSQSDRDTLKNLGDR 455 A +R + + + V + +P Q+ L +L +R Sbjct: 442 ACSRVAMALHATPAQLEAVQRRIEALGVEQEVLLREAALGLPTAERLQALETDLASLRER 501 Query: 456 LK--MLVFGQDKAIEALTEAIKMARAGLGHE 484 FGQ+ A+ + A GL Sbjct: 502 QATLAERFGQESALARRILETEAALMGLKPP 532 Score = 252 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 115/442 (26%), Positives = 203/442 (45%), Gaps = 20/442 (4%) Query: 326 EFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 385 + +++ E+ LA RF + +I+ V T A + Sbjct: 494 DLASLRERQATLAERFGQ------ESALARRILETEAALMGLKPPVFSTGAATDPSAAAP 547 Query: 386 VKYINDRHLPDKAIDVIDEAGARARLMPV-----SKRKKTVNVADIESVVARIARIPEKS 440 + A R + + V+ + +VVA IP Sbjct: 548 ETAAEATATEPAEPPSVATLEALRRQLAELQGDAPLLQPVVDAGVVAAVVAEWTGIPVGR 607 Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 + + + ++ +L D L+ V GQ +EA+T I+ +RA L KP+G FL AGP+GVG Sbjct: 608 MVRDEVQSVLSLADTLEKRVIGQRHGLEAITRRIQTSRARLDDPGKPIGVFLLAGPSGVG 667 Query: 501 KTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 KTE + L++AL L+ +MSE+ E HTVS L GAPPGYVG+ +GG+LT+AV + P Sbjct: 668 KTETALSLAEALYGGEQNLITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRP 727 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETE---- 613 ++V+LLDEIEKAH DV + QV D G + D GR DF+N V+++T+N G Sbjct: 728 YSVVLLDEIEKAHSDVHEMFFQVFDKGWMEDGEGRYIDFKNTVIILTSNVGSDLIANMCR 787 Query: 614 RKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQL 673 + + + + + + F RL ++ + +S ++ Q++ ++ +Q ++ Sbjct: 788 DPDLAPTPEGLAQAVRQPLLQTFPAALLGRLT-VVPYYPISDAMLEQIIRLQMLRIQRRI 846 Query: 674 DQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVT 732 +++ G + A + + + + GAR + ++ NL +A L ++ + Sbjct: 847 EERHGAQFSFDEAAVDLVRRRCSEVESGARMVDGILTQNLLPRMATHFLQATVEGQELQS 906 Query: 733 VALDKEKNELTYGFQSAQKHKA 754 + ++ T ++ A Sbjct: 907 LHAGASGDDFTLDVRTRAAEPA 928 >UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostreococcus RepID=A4RQJ1_OSTLU Length = 807 Score = 340 bits (873), Expect = 9e-92, Method: Composition-based stats. Identities = 151/437 (34%), Positives = 236/437 (54%), Gaps = 32/437 (7%) Query: 325 QEFSNIFEKDRALARRFQ--KIDITEPSIEETVQII-----NGLKPKYEAHHDVRYTAKA 377 E+ + + + R+ + K+ I + + E ++ + V+ T Sbjct: 377 DEYRRAYANNSFIKRKVENAKMKIAQATQAEAGSVLAAELGRAQAELKKLEQQVKTTEDE 436 Query: 378 VRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIP 437 + AA + A+ + + GA R + V D+ +VV+R +P Sbjct: 437 LTAA--------------EAAVLELKDGGAMMR--------EEVTDNDVAAVVSRWTGVP 474 Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 + S++ L L L V GQ+ A+ ++ EA++ +RA L + PV SF+F GPT Sbjct: 475 VAKLVSSEKAKLLQLEAELHQRVIGQEAAVTSVAEAVQRSRADLADPNGPVASFMFLGPT 534 Query: 498 GVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 GVGKTE+ L+ L L+R DMSEYME+H+V+RLIGAPPGYVG+D+GG+LTDAV Sbjct: 535 GVGKTELAKALASYLFNSDTALVRLDMSEYMEKHSVARLIGAPPGYVGYDEGGMLTDAVR 594 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 + P++V+L DEIEKAH DVFN+LLQ++D G +TD GR FRN +++MT+N G E Sbjct: 595 QKPYSVVLFDEIEKAHVDVFNVLLQLLDEGHVTDTQGRNVSFRNCLIIMTSNLGSDEISY 654 Query: 615 KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD 674 + + M+ ++ F PEF NRLD I F+ L+ I ++V +L ++D Sbjct: 655 ANKRRNKVNVKDAVMQHVRSHFRPEFVNRLDEFIVFEPLTHAQIEEIVQLQTKKLSQRID 714 Query: 675 QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 + ++L + + A LA +GYD A GARP+ R IQ L +PLAN +L G + + V Sbjct: 715 TQRMNLSLDRSAIEHLARQGYDPAYGARPVRRAIQRELIQPLANAMLRGVFNEDDTILVT 774 Query: 735 LDKEKNELTYGFQSAQK 751 D++ L+ G + ++ Sbjct: 775 ADRQGICLSNGPKIVRE 791 Score = 255 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 125/454 (27%), Positives = 210/454 (46%), Gaps = 22/454 (4%) Query: 112 IFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN 171 + + A K V+ I+ + + Q + +E Sbjct: 2 LAGAANAFAVDDAAKPSVASAREDAQIAMMRQMQQQMQQMQQQQNGAQNPEDEELSALER 61 Query: 172 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 F T++ AR G +DPL+GRE+E+ R I +LCRR KNNP+L+G+SGVGKTAI EGLA RI Sbjct: 62 FCTDVTDEARRGLLDPLVGREEEVRRLIHILCRRTKNNPVLLGQSGVGKTAIVEGLAQRI 121 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ---LEQDTNSILFIDEIH 288 V DVP+ + + +D+G++ AG + G+FE+R ++++ +LFID+IH Sbjct: 122 VNDDVPQALRGAKLLEVDLGAVGAGCQMPGEFEERLTIIVQEVVDATAKGPVVLFIDDIH 181 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 + A + A ++KP L G +R +G+T+ +F E+D AL RRFQ++ + E Sbjct: 182 NLCPAPPMNNNG---AAILKPALGRGLLRCVGATSADKFKKTIEQDAALERRFQQVPVEE 238 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 P++++TV I+ GL+P+YE HH++ + A+ AA +L+ +Y++ R LPDKAID++DEA A Sbjct: 239 PNVDDTVSILRGLRPRYEQHHNIAISEGALLAAAQLSARYVSGRQLPDKAIDLLDEAAAA 298 Query: 409 ARLMPVSKRKKTVNVADIESVVARIARIP---------------EKSVSQSDRDTLKNLG 453 R+M K + + + + ++ Sbjct: 299 VRMMKTHKPDGLDMADRKIAQLQKERDQLLRKNAGELAKAGTSNVAAAELQKIAAALSVE 358 Query: 454 DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 + + + + + + + A A + V + + E L+ LG Sbjct: 359 KKARKEMQSKYDTERRIQDEYRRAYANNSFIKRKVENAKMKIAQAT-QAEAGSVLAAELG 417 Query: 514 IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 E + T L A + GG Sbjct: 418 RAQAELKKLEQQVKTTEDELTAAEAAVLELKDGG 451 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 86/246 (34%), Gaps = 50/246 (20%) Query: 88 LQRAVFHVQSSGRNEVTGANVL----VAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTR 143 L RA ++ + T + L A+ ++ A + + EV+ DV +S T Sbjct: 416 LGRAQAELKKLEQQVKTTEDELTAAEAAVLELKDGGA---MMREEVTDNDVAAVVSRWTG 472 Query: 144 KDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLC 203 S ++ E + +IG+E + + + Sbjct: 473 VPVAKLVSSEKAKLLQLEAELHQ--------------------RVIGQEAAVTSVAEAVQ 512 Query: 204 RRR-----KNNPL----LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL--DIGS 252 R R N P+ +G +GVGKT +A+ LA + D V D + Y + Sbjct: 513 RSRADLADPNGPVASFMFLGPTGVGKTELAKALASYLFNSDTALVRLDMSEYMEKHSVAR 572 Query: 253 LL-AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL 311 L+ A Y G E L + Q S++ DEI VD N++ LL Sbjct: 573 LIGAPPGYVGYDEGGM--LTDAVRQKPYSVVLFDEI---------EKAHVDVFNVLLQLL 621 Query: 312 SSGKIR 317 G + Sbjct: 622 DEGHVT 627 >UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B6EJJ8_ALISL Length = 872 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 150/503 (29%), Positives = 251/503 (49%), Gaps = 33/503 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELE 59 L ++ SL A + H + EH + LL P+ ++A+E + ++ ++L Sbjct: 13 LTPGMKASLEAAAGECVQRGHFSIEFEHWFVQLLQQPTVGWQKAVEQTGMASESILEQLN 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGA--NVLVAIFSEQE 117 + + + +L+ A S +++ +VL+ + E Sbjct: 73 NHLSSLPR-----GNDSAPSLSPQLVELLKDAWMI-GSLNHAQLSMNEFHVLIVLKQRIE 126 Query: 118 --------SQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERM 169 S L ++R + T + +S + E + Sbjct: 127 QGAYNGALSTWIKSLSSEWLNRQSITK-----TASSHLSSTSMLCGKNQGMEGNMSTPAL 181 Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAW 229 + ++ NL Q AR G +DP+ GR E+ +AI +LCRRR+N+P+LVG+ GVGKTAI EGLA Sbjct: 182 DKYSQNLTQAARNGDLDPISGRGNEIRKAIDILCRRRQNSPILVGDPGVGKTAIVEGLAQ 241 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIH 288 +IV G+VP + + + +LD+ L AG +G+FE R K ++ +++Q I+FIDE H Sbjct: 242 QIVDGNVPPALKNVELRNLDLSLLQAGASIKGEFENRLKDVINEIKQSATPIIVFIDEAH 301 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 T+IGAG A+ GQ DAAN++KP L+ G+ R I +TT+ E+ FE D AL+RRFQ + I E Sbjct: 302 TLIGAGGAA-GQNDAANILKPALARGEFRSIAATTWAEYKQYFESDAALSRRFQVVSIGE 360 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 PS + + +++G+K E HH+V+ +A+ AAV L+++Y+ +R LPDKAI ++D A +R Sbjct: 361 PSEGDAIHMLSGVKTCLEKHHNVKVMQEAINAAVSLSIRYLPERKLPDKAISLLDTACSR 420 Query: 409 ARLMPVSKRKKTVNVADIESVVARI--ARIPEKSVSQSDRDTLKNLGDR------LKMLV 460 L + ++ VA+ V E ++ D D L+ + R + Sbjct: 421 IGLSQSAPPRQLEAVAEQICYVENEITTLNHEAALWSIDDDRLEQVQQRLIDLQEQHQEI 480 Query: 461 FGQDKAIEALTEAIKMARAGLGH 483 + + L E I + + L Sbjct: 481 GKCWEQEKTLVEEIIVLQTKLDE 503 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 197/416 (47%), Gaps = 15/416 (3%) Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI----DV 401 I + +E+ Q + L+ +++ K + + + ++++ L + D Sbjct: 458 IDDDRLEQVQQRLIDLQEQHQEIGKCWEQEKTLVEEIIVLQTKLDEQFLNGDDLSENEDK 517 Query: 402 IDEAGARARLMPVSKRKK----TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 A L + + VN I V++ IP ++ + + + L +L + Sbjct: 518 FLLAIKMTELHAIQDDQPLVLPQVNEQTIAEVISLWTGIPVGNMLKEEVEHLMHLEKHIG 577 Query: 458 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI--- 514 V GQ I +++AI+M+RAGL KPVG FL GP+GVGKTE + L+ L Sbjct: 578 ERVIGQIAPIAEISKAIRMSRAGLTDLRKPVGVFLMCGPSGVGKTETALALTDLLYGGKR 637 Query: 515 ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVF 574 + +M+E+ E H VS L+G+P GYVG+ +GG+LT+AV K+P++VLLLDE+EKAHP V Sbjct: 638 NITTINMTEFKEEHKVSTLLGSPAGYVGYGKGGVLTEAVRKNPYSVLLLDEMEKAHPGVH 697 Query: 575 NILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER--KSIGLIHQDNSTDAMEEI 632 +I Q+ D G+++D+ GR+ DFRN +++MT+NA + E+ Sbjct: 698 DIFYQIFDKGSISDSEGREVDFRNTIIIMTSNAADSAVVNGCADGRPSISILTKAIFPEL 757 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLA 691 + F P F R + +F L+ + + ++ + ++ ++ Q + + + L Sbjct: 758 QNFFKPAFLGRTTIVPYF-PLNDEEMSKIAQLSLRRIEKRIKQHYNATFDYDTQVIELLV 816 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 GAR + ++I L LAN+ + V L N+ + Sbjct: 817 SMNQSPETGARAIEQLINRQLMPELANQCIVRMSQSQPISEVLLTVNGNKFQIDIK 872 >UniRef50_A7APH1 Clp amino terminal domain containing protein n=1 Tax=Babesia bovis RepID=A7APH1_BABBO Length = 1005 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 131/441 (29%), Positives = 223/441 (50%), Gaps = 22/441 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 + + L ++ A+ + + ++H+LL L+ A L V LR ++ Sbjct: 79 FSDDAVKVLMLSQEEAKRGAVKQIEIKHILLGLVAVQRGIASNVLSHFGVTSKKLRDVID 138 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 +E T E+ + + + LQ + +S G + ++L+ + Sbjct: 139 N-LEDNTIPPDDKNEDYNLIFSQESKNALQLSSIEAESMGNKTLETEHILLGMLGTHSYT 197 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQ------------------SSDPGSQPNSEE 161 +L V+ + N +++ PG + Sbjct: 198 FRQILDALTVNIDAMRNLTLKYIAEEKEKPAEEMPTDTWKQALSQYTYIPTPGRSEDILR 257 Query: 162 QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 + FT ++ + A G + ++ R+ E++R+I+ LCR+ K NP+L+GE GVGKT Sbjct: 258 DTYQVSPLNAFTIDITRKAEEGKLQKVLCRDSEIDRSIRTLCRKYKRNPILIGEPGVGKT 317 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI 281 A+ EG+A ++ +G V E M + + LD+G L+AG ++RG FE+R L+++++ N I Sbjct: 318 AVVEGIAMQLREGHVLEKMLNKRLRQLDVGLLVAGARFRGQFEERLTRLIEEIKNAKNII 377 Query: 282 LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 L IDE H ++GAGA G +DAANL+KP L+ G+I+ I TT +E+ FEKD AL RRF Sbjct: 378 LVIDEAHMLVGAGAGEGA-LDAANLLKPTLARGEIQCIAITTPKEYQKHFEKDAALCRRF 436 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDV 401 Q I + EPS ++T I+N H+V+Y AV AA++ + ++I +R+LPDKAID+ Sbjct: 437 QPIHVKEPSDKDTQIILNATAEACGRFHNVKYNMDAVAAALKYSKQFIPERYLPDKAIDI 496 Query: 402 IDEAGARARLMPVSKRKKTVN 422 +DEAG+ A++ + K Sbjct: 497 LDEAGSLAKIRFYEQLKVEWK 517 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 107/358 (29%), Positives = 196/358 (54%), Gaps = 19/358 (5%) Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479 VN + VV+ +P K ++Q + + ++NL L V G ++A++ + +AI+ A+ Sbjct: 621 EVNTEHVAEVVSNWTGVPLKKLTQGEIEAIRNLEQELHKSVVGHEEAVKNIAKAIRRAKT 680 Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG--IELLRFDMSEYMERHTVSRLIGAP 537 + + +P+GSFLF GP GVGK+E+ L+K + L++ DMSEY E H++SR++G+P Sbjct: 681 NIKNPERPIGSFLFCGPPGVGKSEIAKTLTKLMFTEDNLIKLDMSEYNEPHSISRILGSP 740 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGY G D GG LT+ + K+P++V++ DEIEKAH +V NILLQ++++G LTD+ + F+ Sbjct: 741 PGYKGHDSGGQLTEKLRKNPYSVVMFDEIEKAHRNVLNILLQILEDGKLTDSKNQTVSFK 800 Query: 598 NVVLVMTTNAGVRETERKSIGL----------------IHQDNSTDAMEEIKKIFTPEFR 641 N +++MT+N G E+ G+ ++ +E+K F PE Sbjct: 801 NTIIIMTSNVGSHIIEKAVRGIHTFGFNIEDVLNDKQTDYEKAKKQVCDELKSTFKPELI 860 Query: 642 NRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGA 701 +R+D++I F L+ + Q+ I + G+ + V + + + D GA Sbjct: 861 DRIDDVILFRPLNEQQMKQIAKLMIEATLKRAKDAGIDVVVDDSFIDHIMKLPRDATGGA 920 Query: 702 RPMARVIQDNLKKPLANELLFGSLVDGGQVTVALD-KEKNELTYGFQSAQKHKAEAAH 758 RP+ R+I +L LA+ ++ + G + + +D + ++ +++ + + + H Sbjct: 921 RPIRRLITTHLDDQLADFVISKDYIPGIKYRITVDSNAQIKIKSDKKTSPRKQGKQVH 978 >UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8B6K3_GIALA Length = 882 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 160/487 (32%), Positives = 262/487 (53%), Gaps = 22/487 (4%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQELEA 60 +L+ + + ++ H H + H+ AL ++ + +A++ CS D+ A+R+ +E Sbjct: 8 TNDLQKVMTESIRVSQRHGHSLVNQYHIAAALFADDDSISSKAVQKCSGDVSAIRRAIET 67 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 +++T V P + P + ++ + + + ++ ++ A + + Sbjct: 68 GLKKTPSVTPVPD---TPSPAGGYLGIINKMSAYAEEGRDEYLSTFHLAKAAAQDTDL-- 122 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A LR+ V+ V I G NSE E +E + + A Sbjct: 123 ARCLREGRVTSNRFVEEIEKM----------KKGRSMNSEFAEDTCEALEKYCVEMVAKA 172 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 G DPLI R+ EL R +++L RR KNNP+L G +GVGKTAI EGLA RIV+ DVP+ + Sbjct: 173 EEGKYDPLIARDNELRRIVEILSRRTKNNPVLTGPAGVGKTAILEGLAQRIVRADVPQNI 232 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGAGAASGG 299 + IY+LD+G+L+AG +YRG FE+R KA+L +L++ + NSILFIDEIHT+IGAG + G Sbjct: 233 RNARIYALDLGALIAGAQYRGQFEERLKAILDELKKSEGNSILFIDEIHTLIGAGGSKGT 292 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 DAANL+KP L+ G+IR IG+TT +E+ N DRA RRF ++ + EP++E+T+ I+ Sbjct: 293 S-DAANLLKPALARGEIRCIGATTTEEYRNHIASDRAFERRFAEVFVAEPNVEDTISILR 351 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYIND--RHLPDKAIDVIDEAGARARLMPVSKR 417 GL +Y++HH +R T A+ AA +LA +Y+ RH PD AID++DEAGA R+ S+ Sbjct: 352 GLSGRYQSHHQIRITDGALVAAAQLANRYVRAMGRHNPDAAIDLLDEAGASVRVTLDSQP 411 Query: 418 KKTVNVADIESVVARIARIPEKSVS-QSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM 476 + + + + + ++ ++ + + D I+ L E Sbjct: 412 AQLDALNRKKLRLQIEEEALRRESEARNADSSISKRLADIIKEISNIDMQIKPLEEQYNR 471 Query: 477 ARAGLGH 483 R+ + Sbjct: 472 ERSSIDK 478 Score = 297 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 187/802 (23%), Positives = 325/802 (40%), Gaps = 93/802 (11%) Query: 17 AREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELE----------------- 59 A E R E+++ HL A + L V +E+E Sbjct: 99 AEEGRDEYLSTFHLAKAAAQDTDLARCLREGRVTSNRFVEEIEKMKKGRSMNSEFAEDTC 158 Query: 60 AFIEQTTPVLPASEEERDTQP----TLSFQRVLQRAVFHVQSS----GRNEVTGANVLVA 111 +E+ + A EE P +R+++ +++ G V +L Sbjct: 159 EALEKYCVEMVAKAEEGKYDPLIARDNELRRIVEILSRRTKNNPVLTGPAGVGKTAILEG 218 Query: 112 IFSE-QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERME 170 + + +R + LD+ I+ + + + + + ++ Sbjct: 219 LAQRIVRADVPQNIRNARIYALDLGALIAGAQYRGQFEERLKAILDELKKSEGNSILFID 278 Query: 171 NFTTNLNQLARVGGIDPLIGREK-----ELERAIQVLCRRRKNNP------------LLV 213 T + G D + E+ +N+ + V Sbjct: 279 EIHTLIGAGGSKGTSDAANLLKPALARGEIRCIGATTTEEYRNHIASDRAFERRFAEVFV 338 Query: 214 GESGVGKT-AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLK 272 E V T +I GL+ R + G+L+A + + + Sbjct: 339 AEPNVEDTISILRGLSGRY---------QSHHQIRITDGALVAAAQLANRYVRAMGR--- 386 Query: 273 QLEQDTNSILFIDEIHTIIG-AGAASGGQVDAANLIKPLL---------------SSGKI 316 +I +DE + + Q+DA N K L + I Sbjct: 387 --HNPDAAIDLLDEAGASVRVTLDSQPAQLDALNRKKLRLQIEEEALRRESEARNADSSI 444 Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAK 376 + +E SNI + + L ++ + E S + + I E +V T Sbjct: 445 SKRLADIIKEISNIDMQIKPLEEQYNR----ERSSIDKISNIKARITALEDKLEVYTTRG 500 Query: 377 AVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARI 436 V A +L I + + ++ EA + A + V ++ +VV++ I Sbjct: 501 EVSKAADLQYGAIPELRDELRRLEKEQEAASYAHHDEKAMLSAVVTEMEVANVVSKWTGI 560 Query: 437 PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGP 496 P ++++DR+ L +L + V GQ+ A++A+ +I ARAGL +P+GSFLF G Sbjct: 561 PVNKLTRTDREKLLSLEQTISSKVIGQEPAVKAVCSSILRARAGLSRPTQPLGSFLFLGS 620 Query: 497 TGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAV 553 +GVGKT + +++ L ++ DMSEY E+H+VSRLIGAPPGYVG++Q G LT+AV Sbjct: 621 SGVGKTYLAKTIAEELYDSVDSMIHIDMSEYTEQHSVSRLIGAPPGYVGYEQAGQLTEAV 680 Query: 554 IKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETE 613 + +AV+L DEIEKAHP + ILLQ++D G LTD G DF N V+++T+N G RE Sbjct: 681 SRKRYAVVLFDEIEKAHPKILTILLQILDEGRLTDGKGNCVDFTNTVIMLTSNLGSRELL 740 Query: 614 RKSIGLIHQDNSTDAMEE----IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 + + + A E ++ PE NRLD++I F+ L+ D + ++ +L Sbjct: 741 QCYHSNVSASQAKQAKEHVIGVVRSTLPPELINRLDDLIVFNPLTKDALVKIFRSLCGQL 800 Query: 670 QVQLD-QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF------ 722 + +L + G+ L V + +A + D GARP+ R I+ + +A +L+ Sbjct: 801 EERLQHESGLRLRVDDAVAD-IALRDSDMVYGARPLRRFIEREITTAVARKLIEVPSDAR 859 Query: 723 GSLVDGGQVTVALDKEKNELTY 744 + V V+ + +T Sbjct: 860 SNREKRRCVHVSAKDDGIFVTI 881 >UniRef50_C6HYE9 ATPase AAA-2 domain protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYE9_9BACT Length = 890 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 153/494 (30%), Positives = 242/494 (48%), Gaps = 15/494 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAR--EALEACSVDLVALRQELE 59 ++ L ++ H +T EH++++LL +P + + L A +D ++R+E+ Sbjct: 13 MSPILTRAVEQGAGLCLSRSHYEITPEHVVISLLDHPDSDVMKILAAEGIDGGSVRREMS 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ S + VLQ A + T + V + F + S Sbjct: 73 NALDDL-----RSGNGGRPVFSPLLIEVLQDAHLIASINRNEPHTRSGVFLQAFVNRLSA 127 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 + + R+ + + G Q + E + + F + + Sbjct: 128 YSSGRPSKSLERIGKERLKDQFDTLASGSAEAIGGGQESQEGPSEEGTAIGRFCEDFTEK 187 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G IDP+ GR+ E+ + I +L RRRKNNP+ VG+ GVGKTA+ E LA RIV+GDVPE Sbjct: 188 ARKGKIDPVFGRDAEVRQIIDILSRRRKNNPICVGDPGVGKTAVVESLALRIVEGDVPES 247 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGAASG 298 ++ + LD+G+L AG +G+FE R K ++ +++ + ILFIDE HT+IGAG A G Sbjct: 248 LSKVRLLGLDMGALEAGAGVKGEFENRLKGVINEIKASSVPVILFIDEAHTLIGAGGAQG 307 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ + + EPS+E + I+ Sbjct: 308 -GGDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQPVKLDEPSVETAILIL 366 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK YEA H V A+ AA L+ +Y+ R LPDKA+D++D + AR R+ SK + Sbjct: 367 RGLKAHYEAVHHVTIRDDALVAAATLSDRYLTGRKLPDKAVDLLDTSAARIRISQSSKPE 426 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR------LKMLVFGQDKAIEALTE 472 K + + R + + + L L+ + Q + E Sbjct: 427 KIEGLERRIQALEREKNGLVRDQTFGQDIPAERLDAIGRELGTLEQELSRQRERWEKEKT 486 Query: 473 AIKMARAGLGHEHK 486 A+ A + Sbjct: 487 AVAELLAHREDPRR 500 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 123/439 (28%), Positives = 205/439 (46%), Gaps = 30/439 (6%) Query: 332 EKDRALARRFQKID-----------ITEPSIEETVQII---NGLKPKYEAHHDVRYTAKA 377 EK L RR Q ++ + E + I G + + R+ + Sbjct: 426 EKIEGLERRIQALEREKNGLVRDQTFGQDIPAERLDAIGRELGTLEQELSRQRERWEKEK 485 Query: 378 VRAAVELAVKYINDRHLPDKAIDVID----EAGARARLMPVSKRKKTVNVADIESVVARI 433 A LA + R PD+ + + EA R V+ + VV+ Sbjct: 486 TAVAELLAHREDPRREGPDRESWMKELRTKEAAVRKIQEDHPMIHFEVDPETVARVVSNW 545 Query: 434 ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLF 493 IP + + T+ L + L V GQ+ A+ + E I+ +RAG ++PVG FL Sbjct: 546 TGIPLGKLLREQAQTVMRLQETLGERVLGQEPALARVGEIIRNSRAGFKAPNQPVGIFLL 605 Query: 494 AGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLT 550 GP+GVGKTE + ++ L + + +MSE+ E+H SRLIG+PPGYVG+ +GGLLT Sbjct: 606 VGPSGVGKTETALAVADILFGDEKATVTLNMSEFQEKHQASRLIGSPPGYVGYGEGGLLT 665 Query: 551 DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR 610 +AV + P++V+LLDE+EKAHPD+ N+ QV D G L+D G++ DF N V+ +T+N Sbjct: 666 EAVRQRPYSVVLLDEVEKAHPDILNMFYQVFDKGVLSDGEGKEIDFSNTVIFLTSNLASE 725 Query: 611 ETERKSI---GLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 + ++ ++D T ++ + F P R+ I+ + L + + ++V Sbjct: 726 KLSAYALEHPEASYEDLVTLIRPDLSRHFKPALLARMT-IVPYLPLRGEALGRIVRLKTK 784 Query: 668 ELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLV 726 L GV + + +A + GAR + ++Q + ++ EL+ G LV Sbjct: 785 RLSRSFVQNNGVEIVFEDSLIDHVALQCETSEAGARNIDYLLQSRILPEISRELI-GRLV 843 Query: 727 DGGQ---VTVALDKEKNEL 742 +G V V + + + Sbjct: 844 EGTLDGPVRVGIAPDGTTV 862 Score = 43.2 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 69/437 (15%), Positives = 133/437 (30%), Gaps = 68/437 (15%) Query: 34 LLSNPSAREALEACSVD--LVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRV---- 87 LL +AR + S + L + ++ +E+ L + P + Sbjct: 409 LLDTSAARIRISQSSKPEKIEGLERRIQ-ALEREKNGLVRDQTFGQDIPAERLDAIGREL 467 Query: 88 --LQRAVFHVQSSGRNEVTGANVLVAIFSEQ--ESQAAYLLRKHEVSRLDVVNFISHGTR 143 L++ + + E T L+A + E K ++ V I Sbjct: 468 GTLEQELSRQRERWEKEKTAVAELLAHREDPRREGPDRESWMKELRTKEAAVRKIQEDHP 527 Query: 144 KDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVL- 202 + ++ S ++ + + ++G+E L R +++ Sbjct: 528 MIHFEVDPETVARVVSNWTGIPLGKLLREQAQTVMRLQETLGERVLGQEPALARVGEIIR 587 Query: 203 ----CRRRKNNP----LLVGESGVGKTAIAEGLAWRI-VQGDVPEVMADCTIYSLDIGSL 253 + N P LLVG SGVGKT A +A + + S Sbjct: 588 NSRAGFKAPNQPVGIFLLVGPSGVGKTETALAVADILFGDEKATVTLNMSEFQEKHQASR 647 Query: 254 LAGT--KYRGDFEKRFKA-----------LLKQLEQDTNSILFIDEIHTIIGAG---AAS 297 L G+ Y G E LL ++E+ IL + + + G Sbjct: 648 LIGSPPGYVGYGEGGLLTEAVRQRPYSVVLLDEVEKAHPDILNM--FYQVFDKGVLSDGE 705 Query: 298 GGQVDAAN---LIKPLLSSGKIRVIG----STTYQEFSNIFEKD------RALARRFQKI 344 G ++D +N + L+S K+ +Y++ + D AL R + Sbjct: 706 GKEIDFSNTVIFLTSNLASEKLSAYALEHPEASYEDLVTLIRPDLSRHFKPALLARMTIV 765 Query: 345 DITEPSIEETVQIIN----GLKPKYEAHHDVRYTA------------KAVRAAVELAVKY 388 E +I+ L + ++ V + A Sbjct: 766 PYLPLRGEALGRIVRLKTKRLSRSFVQNNGVEIVFEDSLIDHVALQCETSEAGARNIDYL 825 Query: 389 INDRHLPDKAIDVIDEA 405 + R LP+ + ++I Sbjct: 826 LQSRILPEISRELIGRL 842 >UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1U8_9BACT Length = 829 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 165/488 (33%), Positives = 261/488 (53%), Gaps = 26/488 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 +QE A A H +T HL LA+L + L VDL++ ++L Sbjct: 6 FSQEALRVFAEAKNIAIRCDHAEITDLHLSLAILRQKESEIKYRLLEAGVDLLSYERKLT 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 ++ A+ + + R++ + ++S V ++ +AI ++ES Sbjct: 66 EALQ----DRRATPGVSKLYYSRQYHRIVLVSGEISRASFDAYVRTPHLYLAILRDRESP 121 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 +A + + V+ V + ++ + S E++ F N + Sbjct: 122 SAAIAAEFGVTVESVQSMLAARLTASDELGIS-----------PEQMEQLNRFGRNFLKE 170 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G +DP++GR++E+ +VL RR KNNP+L+GE+GVGKTA+AEG+A RI + D P + Sbjct: 171 AREGLMDPVLGRDEEINECFRVLSRRLKNNPVLIGEAGVGKTAVAEGIAQRIAKQDAPAL 230 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASG 298 + ++SLD+ +L+AGTKYRGDFE+R K +L+ ++ ILF+DE+HTIIGAG+ S Sbjct: 231 LRGRMVFSLDMAALVAGTKYRGDFEERLKEILEIIKASKGRIILFVDELHTIIGAGSGS- 289 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +D +N++KP L+ G+I +IG+TT +E+ E DRAL RRFQKI I EPS E + ++ Sbjct: 290 GSMDTSNILKPFLARGEILMIGATTVEEYRRYIEPDRALERRFQKILIEEPSEEAALSML 349 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 G+ KYE HH VR A+ AA++L+ +YI DR+LPDKAID+IDEAGA R+ S + Sbjct: 350 RGVVSKYETHHRVRIADGALIAAIQLSKRYITDRYLPDKAIDLIDEAGAMVRMSMDSMPQ 409 Query: 419 K--TVNVADIESVVARIARIPE-----KSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 + N I+ + I + E + Q+ L + R + K +E L Sbjct: 410 ELDEWNRRIIQWEMEHILLLDEADPAAQRRRQTLEKQLADERARYEERFAAWQKEVERLD 469 Query: 472 EAIKMARA 479 E ++ Sbjct: 470 ELSRLKEL 477 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 131/561 (23%), Positives = 234/561 (41%), Gaps = 64/561 (11%) Query: 193 KELERAIQ---VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD 249 +E R I+ L RR + +L+ E E A +++G V + + D Sbjct: 316 EEYRRYIEPDRALERRFQK--ILIEEPS-------EEAALSMLRGVVSKYETHHRVRIAD 366 Query: 250 IGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP 309 + A + K + +I IDE AGA +D+ Sbjct: 367 GALIAA--------IQLSKRYITDRYLPDKAIDLIDE------AGAMVRMSMDSMPQELD 412 Query: 310 LLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI----EETVQIINGLKPKY 365 + I+ + + E D A RR Q ++ EE + Sbjct: 413 EWNRRIIQW----EMEHILLLDEADPAAQRRRQTLEKQLADERARYEERFAAWQKEVERL 468 Query: 366 EAHHDVRYTAKAVR---AAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 + ++ VR + A + + + + + R+ P + V Sbjct: 469 DELSRLKELRDEVRRSLEDAQEAHRVDDVKRFVAERQAFDAKIAEIERIGPHYPVSREVT 528 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 +I+ +VA A IP S+ +S+ + L+ G L G A+ A+ ++I AR+GL Sbjct: 529 EEEIKRIVAVRAGIPLSSIGRSESEKLEQAGKSLLAEFVGHRDAVSAVRQSILRARSGLM 588 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPG 539 +PVGSFL GP+G GK+ + +K + L F+M E+ ++ +V++LIGAPPG Sbjct: 589 KRRRPVGSFLLVGPSGTGKSYLAELFAKHYYEDERSPLSFNMREFTDKASVNKLIGAPPG 648 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 YVG D G LT+AV PH+V++ + ++ A +V +++ ++ +G + DN GR DFRN Sbjct: 649 YVGHDAAGALTEAVRLRPHSVIVFESVDHAGAEVLSLIARLAADGEIADNRGRTVDFRNA 708 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 +L T STD ++++ D + +F+ S Sbjct: 709 LLFFTVT------------------STDRDPPVRELLRDGL----DGVYYFEDFSLRERR 746 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDR-AMGARPMARVIQDNLKKPLAN 718 +++ + ELQ +L+++ + L + + + G+DR GA P+A ++ + LA Sbjct: 747 ELLTLRLRELQRELEEEQIELSWDEATLDAVTA-GFDRAESGAHPVAGYMERTVLADLAA 805 Query: 719 ELLFGSLVDGGQVTVALDKEK 739 + L G L G +V + Sbjct: 806 KKLLGRLRPGARVVIRTGGAD 826 >UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN Length = 867 Score = 338 bits (867), Expect = 4e-91, Method: Composition-based stats. Identities = 143/482 (29%), Positives = 235/482 (48%), Gaps = 24/482 (4%) Query: 6 LELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELEAFIE 63 + A R +RHE++ +EH L L+ L + + +L+ I+ Sbjct: 20 AYKTFVEATRLCRSYRHEYVELEHWLKILMDQQRGDIPALLTHYGLSQTVISTQLDRIIQ 79 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE-VTGANVLVAIFSEQESQAAY 122 + + + + V++ + Q + +++L+A+ + + Q Sbjct: 80 HMPVTKASVQ-----DLSSRLESVVEGGLVLSQLMASPSPIRTSHILLALLQDTQHQRWL 134 Query: 123 LLRKHEVSRLDVVN-------FISHGTRKDEPTQSSDP-GSQPNSEEQAGGEERMENFTT 174 E +L V + + + Q D ++ +S + + Sbjct: 135 YRLCDEFKKLPVPQVAEEYEGLLVNSIEQTSEVQRGDALVTETDSSSSKEAHAALNKWCN 194 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +L Q AR G IDP+IGRE EL + I +L RRR+NNP+LVGE+GVGKTA+ E LA ++ G Sbjct: 195 DLTQQARDGEIDPVIGREAELRQVIDILLRRRQNNPILVGEAGVGKTAVVEALARKLASG 254 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFIDEIHTIIGA 293 DVP ++ + SLD+G + AG RG+FE R K+L+ + Q DT ILF DE HT++GA Sbjct: 255 DVPPLLQGARLLSLDLGRMQAGASMRGEFESRLKSLIDGISQSDTPVILFCDEAHTLVGA 314 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G +G DA NL+KP+L+ G +R+I +TT+ E+ E D AL RRFQ++ I EP+ Sbjct: 315 GGQAGTG-DAVNLLKPMLARGALRMIAATTWSEYKQFIEPDAALTRRFQRVLIGEPNEST 373 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 V ++ + P + HH+V A+ AAV L+++ + R LPDKAI ++D A AR L Sbjct: 374 AVDMLRAIAPHFAQHHNVTIRDGAIHAAVRLSLRNLPSRQLPDKAISLLDTACARVALSQ 433 Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA 473 ++ + ++ V+ + + L D+ V Q +A E A Sbjct: 434 YAQPQAIEQLSAQLDVLKTEHQYLVRE------KQLGEAVDQRLDDVQTQIQAFEHELTA 487 Query: 474 IK 475 ++ Sbjct: 488 LQ 489 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 172/799 (21%), Positives = 296/799 (37%), Gaps = 75/799 (9%) Query: 2 LNQELELSLNMAFARAREHRHEF-MTVEHLLLALLSNPSAREALEAC-----SVDLVALR 55 L+ LE + ++ + H+LLALL + + L + + + Sbjct: 91 LSSRLESVVEGGLVLSQLMASPSPIRTSHILLALLQDTQHQRWLYRLCDEFKKLPVPQVA 150 Query: 56 QELEAFIEQTTPVLPASE------EERDTQPTLSFQRVLQRA-VFHVQSSGRNEVTGANV 108 +E E + + + E D+ + L + Q + E+ Sbjct: 151 EEYEGLLVNSIEQTSEVQRGDALVTETDSSSSKEAHAALNKWCNDLTQQARDGEIDPV-- 208 Query: 109 LVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER 168 I E E + + L + + + + +G Sbjct: 209 ---IGREAELR-------QVIDILLRRRQNNPILVGEAGVGKTAVVEALARKLASGDVPP 258 Query: 169 MENFTTNLN-QLARVGGIDPLIG-REKELERAIQVLCRRRKNNPLLV----------GES 216 + L+ L R+ + G E L+ I + + L G++ Sbjct: 259 LLQGARLLSLDLGRMQAGASMRGEFESRLKSLIDGISQSDTPVILFCDEAHTLVGAGGQA 318 Query: 217 GVG------KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG------SLLAGTKYRGDFE 264 G G K +A G I E D +L G Sbjct: 319 GTGDAVNLLKPMLARGALRMIAATTWSEY---KQFIEPDAALTRRFQRVLIGEPNESTAV 375 Query: 265 KRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD----AANLIKPLLSSGKIRVIG 320 +A+ Q N + IH + + A +L+ + + Sbjct: 376 DMLRAIAPHFAQHHNVTIRDGAIHAAVRLSLRNLPSRQLPDKAISLLDTACARVALSQYA 435 Query: 321 STTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRA 380 Q + + L Q + + E + E V L + A+++ Sbjct: 436 Q--PQAIEQLSAQLDVLKTEHQYL-VREKQLGEAVD--QRLDDVQTQIQAFEHELTALQS 490 Query: 381 AVELAVKYINDRHLPDKAIDVIDEAGAR----ARLMPVSKRKKTV-NVADIESVVARIAR 435 L + + LP+ + AR L S + I +V++ Sbjct: 491 R-HLHEQQLVREVLPEGEGSGMMTENARWGELMALQEASPLVYPWVDEQSIAAVLSDWTG 549 Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 IP + Q D + + NL RL +FGQ AI+ +++AI++ARAG+ + +P+G FL AG Sbjct: 550 IPSGKMLQDDIECVLNLEQRLGDHIFGQRNAIKEISQAIRIARAGIQSQERPLGIFLLAG 609 Query: 496 PTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDA 552 TG GKTE L + L L+ F+MSE+ E HT+S L GAPPGYVG+ +GG LT+A Sbjct: 610 STGTGKTETANVLVETLYGGAHNLITFNMSEFQEAHTLSTLKGAPPGYVGYGKGGKLTEA 669 Query: 553 VIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRET 612 V + P++V+LLDE +KAH D+ + QV D G + D GR+ FR +++T N G E Sbjct: 670 VRRKPYSVILLDEFDKAHADIQDAFYQVFDKGWMEDAEGRRVSFRQCFILLTCNQGAEEI 729 Query: 613 ERKSIGLIHQDN---STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 E+ + + + + F P R++ II + L D + Q+ + L Sbjct: 730 EQAYLTANDIKPGALKPLVYDALLRRFAPALLARVN-IIPYIPLDQDALAQIASHHLARL 788 Query: 670 QVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 Q +L D+ G +L + W+A + R + +++ L + NE+L Sbjct: 789 QTRLWDEIGATLVTEGDIPGWIASRVCSHPNHGRAVEELLRQTLLPAVGNEVLKRRHEAE 848 Query: 729 GQVTVALDKEKNELTYGFQ 747 + L E+ EL+ F Sbjct: 849 PLREIRLIVEETELSIEFA 867 >UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=HS104_YEAST Length = 908 Score = 338 bits (866), Expect = 5e-91, Method: Composition-based stats. Identities = 175/657 (26%), Positives = 291/657 (44%), Gaps = 60/657 (9%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS------AREALEACSVDLVALR 55 + L +A A +H+H + H+L A + P + +E D + Sbjct: 7 FTERALTILTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDYDLFK 66 Query: 56 QELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSE 115 + + + + PA + P+ + +VLQ A + + + ++L A+F+ Sbjct: 67 KVVNRNLVRIPQQQPA---PAEITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFN- 122 Query: 116 QESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 +S + ++ +V + + P E + + + Sbjct: 123 -DSSIQQIFKEAQVDIEAIKQQALELRGNTRIDSRGADTNTP--------LEYLSKYAID 173 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 + + AR G +DP+IGRE+E+ I+VL RR K+NP L+GE G+GKTAI EG+A RI+ D Sbjct: 174 MTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDD 233 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEIHTIIGAG 294 VP ++ ++SLD+ +L AG KY+GDFE+RFK +LK++E+ I LFIDEIH ++G G Sbjct: 234 VPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNG 293 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 DAAN++KP LS G+++VIG+TT E+ +I EKD A RRFQKI++ EPS+ +T Sbjct: 294 KD-----DAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQT 348 Query: 355 VQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPV 414 V I+ GL+PKYE HH VR A+ A +LA +Y+ R LPD A+D++D + A + Sbjct: 349 VAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARD 408 Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSD----------------RDTLKNLGDRLKM 458 SK ++ + ++ + E+ ++ L+ L R Sbjct: 409 SKPEELDSKERQLQLIQVEIKALERDEDADSTTKDRLKLARQKEASLQEELEPLRQRYNE 468 Query: 459 LVFGQDK---AIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE 515 G ++ A + L E A + L K ++ + E Sbjct: 469 EKHGHEELTQAKKKLDELENKALDAERRYDTATAADLRYFAIPDIKKQIEKLEDQVAEEE 528 Query: 516 LLRFDMSEYME-------RHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEK 568 S T +RL G P + + L V+ + K Sbjct: 529 RRAGANSMIQNVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIK 588 Query: 569 AHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS 625 A + + + N + A F + + + +G E +K G + D Sbjct: 589 AVSNAVRLSRSGLANPR------QPASF---LFLGLSGSGKTELAKKVAGFLFNDED 636 Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats. Identities = 133/437 (30%), Positives = 230/437 (52%), Gaps = 8/437 (1%) Query: 322 TTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAA 381 TT +K+ +L + + + + + K K + + A+ Sbjct: 440 TTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEELTQAKKKLDELENKALDAERRYDT 499 Query: 382 VELAV-KYINDRHLPDKAIDVIDEAGARARLM-PVSKRKKTVNVADIESVVARIARIPEK 439 A +Y + + + D+ R S + V+ I AR+ IP K Sbjct: 500 ATAADLRYFAIPDIKKQIEKLEDQVAEEERRAGANSMIQNVVDSDTISETAARLTGIPVK 559 Query: 440 SVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGV 499 +S+S+ + L ++ L V GQ AI+A++ A++++R+GL + +P SFLF G +G Sbjct: 560 KLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQP-ASFLFLGLSGS 618 Query: 500 GKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKH 556 GKTE+ +++ L + ++R D SE E++ VS+L+G GYVG+D+GG LT+ + Sbjct: 619 GKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYK 678 Query: 557 PHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKS 616 P++VLL DE+EKAHPDV ++LQ++D+G +T G+ D N +++MT+N G + Sbjct: 679 PYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAEFINSQQ 738 Query: 617 IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ- 675 I + M +++ F PEF NR+ +I+ F+ LS IH++VD + E++ + +Q Sbjct: 739 GSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQN 798 Query: 676 -KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 K L ++QEA+++LA+ GY MGARP+ R+IQ+ + LA +L + D V V Sbjct: 799 DKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRILKNEIKDKETVNVV 858 Query: 735 LDKEKNELTYGFQSAQK 751 L K K+ + A++ Sbjct: 859 LKKGKSRDENVPEEAEE 875 >UniRef50_C9XYK6 Chaperone protein clpB n=1 Tax=Cronobacter turicensis RepID=C9XYK6_CROTZ Length = 924 Score = 337 bits (865), Expect = 7e-91, Method: Composition-based stats. Identities = 138/444 (31%), Positives = 223/444 (50%), Gaps = 23/444 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L + L S+ A + + ++ + H + + + +VD L + L Sbjct: 43 LGETLFRSIESATTFCKLRGNPYVELVHWINQIWHQEDNDLKHIARYFNVDSEGLERGLS 102 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFH-VQSSGRNEVTGANVLVAIFSEQES 118 +E+ + + + ++RA + N++ ++L+A+ + E Sbjct: 103 YSLERLP-----GSATAVSDFSYLIELAIERAWIYTSLERCENKIRSGHLLMALLTTVEL 157 Query: 119 QAAYL----------LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQA---GG 165 + A L L + + ++ P S + P A Sbjct: 158 RRALLAVAAPLEKVVLEQLSHDFDYITRHSPEVQERESPPFLSSQSAVPGEASGAIKLQS 217 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 + ++T++ LAR G IDP++GR++E+ I +L RRR+NNPLL G++GVGKTA+ E Sbjct: 218 TGSLAQYSTDVTALAREGKIDPVLGRDREISTIIDILLRRRQNNPLLTGDAGVGKTAVVE 277 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFI 284 GLA I +GDVP + D + SLDI +L AG +G+FE R KA+L++ + ILF+ Sbjct: 278 GLACAISRGDVPPSLCDVRLLSLDIVALSAGASMKGEFEARLKAVLEEAASSEQPVILFV 337 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DEIH +IGAG ++G DAANL+KP L+ G++R IG+TT+ EF EKD AL RRFQ + Sbjct: 338 DEIHNLIGAGNSAGTG-DAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVL 396 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EP ++ G+ P E HH+V +A+RAAV+L+ ++I R LPDKAI ++D Sbjct: 397 QVEEPDENSATDMLRGMVPVLELHHNVWILDEALRAAVKLSHRFIPSRQLPDKAISLLDT 456 Query: 405 AGARARLMPVSKRKKTVNVADIES 428 A AR + + + Sbjct: 457 ACARVAVGQHTPPYVLQELKYQIE 480 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 109/367 (29%), Positives = 181/367 (49%), Gaps = 11/367 (2%) Query: 371 VRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR--LMPVSKRKKTVNVADIES 428 V A L DR + + E A+ + V+ + + Sbjct: 531 VSEIIAARATLQHLCQNEEVDRAEREALQQALLEIEAQLNAIRHEQAMVHTEVSAEVVAA 590 Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 +V+ IP + Q + + ++ L RL V GQ A++ ++E I MAR GL +P Sbjct: 591 IVSEWTGIPVGQMLQDEMNIVRELPVRLAERVTGQTFALKQISERILMARTGLADPVRPT 650 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQ 545 G F+ GP+G GKTE + +++ + L+ +MSEY E HTVS L G+PPGYVG+ + Sbjct: 651 GVFMLTGPSGTGKTETALAIAENMYGGEHNLITINMSEYQEAHTVSALKGSPPGYVGYGE 710 Query: 546 GGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTT 605 GG+LT+AV + P++V+LLDEIEKAHPDV + QV D G + D GR DFRN ++++T+ Sbjct: 711 GGILTEAVRRKPYSVILLDEIEKAHPDVHELFFQVFDKGRMEDGEGRLIDFRNTIILLTS 770 Query: 606 NAGVRETERKSIGLIHQDNST----DAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 N G + + ++ K+F F R+ +I + L +D + + Sbjct: 771 NVGSEKISLLCRDENTVPDEEGLLTLLHNDLLKVFPAAFLGRVT-VIPYLPLKSDALMLI 829 Query: 662 VDKFIVELQVQL-DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 V + + +L + V+L+ + EA ++ E+ + GAR + R I+ + + L Sbjct: 830 VKMQLKRVANRLYENHNVTLQYNDEAVRYIVEQCHVAETGARILIRYIEQKIIPKIGGIL 889 Query: 721 LFGSLVD 727 + +L Sbjct: 890 MDSALKA 896 Score = 42.9 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 73/479 (15%), Positives = 151/479 (31%), Gaps = 92/479 (19%) Query: 9 SLNMAFARAREHRHEFMTVEHL---LLALLS---------NPSAREALEACSVDLVALRQ 56 L+ A A + H F+ L ++LL + L+ + + + Sbjct: 425 ILDEALRAAVKLSHRFIPSRQLPDKAISLLDTACARVAVGQHTPPYVLQELKYQIESANR 484 Query: 57 ELE-----AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVA 111 +L + + + + + + R + S + L Sbjct: 485 QLSLATKASTFGKEDQASIDTLKSVIKLRSKEANSLESRWLQEKTSV-SEIIAARATLQH 543 Query: 112 IFSEQESQAAY--LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERM 169 + +E A L++ + +N I H S++ + SE +M Sbjct: 544 LCQNEEVDRAEREALQQALLEIEAQLNAIRHEQAMVHTEVSAEVVAAIVSEWTGIPVGQM 603 Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQ--VLCRRRKNNPL-------LVGESGVGK 220 N+ + V + + G+ L++ + ++ R +P+ L G SG GK Sbjct: 604 LQDEMNIVRELPVRLAERVTGQTFALKQISERILMARTGLADPVRPTGVFMLTGPSGTGK 663 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL----------AGTKYRGDFEKRFKAL 270 T A +A + G+ + ++++ + Y G E L Sbjct: 664 TETALAIAENMYGGE-------HNLITINMSEYQEAHTVSALKGSPPGYVGYGEGGI--L 714 Query: 271 LKQLEQDTNSILFIDEI-------HTI----IGAGAASGGQVDAAN------LIKPLLSS 313 + + + S++ +DEI H + G G+ + L+ + S Sbjct: 715 TEAVRRKPYSVILLDEIEKAHPDVHELFFQVFDKGRMEDGEGRLIDFRNTIILLTSNVGS 774 Query: 314 GKIRVIGS---TTYQEFSNIFEKD--------RALARRFQKIDITEPSIEETVQI----I 358 KI ++ T E + A R I + + I + Sbjct: 775 EKISLLCRDENTVPDEEGLLTLLHNDLLKVFPAAFLGRVTVIPYLPLKSDALMLIVKMQL 834 Query: 359 NGLKPKYEAHHDV--RYTAKAVRAAVELAV----------KYINDRHLPDKAIDVIDEA 405 + + +H+V +Y +AVR VE +YI + +P ++D A Sbjct: 835 KRVANRLYENHNVTLQYNDEAVRYIVEQCHVAETGARILIRYIEQKIIPKIGGILMDSA 893 >UniRef50_Q98IM7 Probable ClpA/B-type protease n=6 Tax=Rhizobiales RepID=Q98IM7_RHILO Length = 945 Score = 337 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 138/443 (31%), Positives = 225/443 (50%), Gaps = 13/443 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELE 59 LN + A A+ + ++ + H + L+ + + +D+ L ++ Sbjct: 19 LNPTGLRAFKAAADTAKMRGNPYVELVHFVQQLVLSERSDVQMIVADAGLDVSRLTADMT 78 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I++ LP + F + + G EV A++L+A + Sbjct: 79 RAIDK----LPYGATSVEEFSDHIFHAIQEGWSLATLEFGVEEVRSAHILLACLKTPALE 134 Query: 120 AAYLLRKHEVSRLDVVNFISHGTR-----KDEPTQSSDPGSQPNSEEQAGGEERMENFTT 174 E ++D I+ + + + ++ + GG+ + + T Sbjct: 135 GLVSKISAEFDKIDADGVIARFADVTEGSLEAGSPPAAAAAETPMKRGLGGDSALAKYAT 194 Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +L Q AR G IDP+IGR+ E+ + + +L RRR+NNP+L GE+GVGKTA+ EG A RI QG Sbjct: 195 DLTQRARDGKIDPVIGRDPEIRQIVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIAQG 254 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGA 293 DVP + + ++ LD+G + AG +G+FEKR KA++ +++ ILFIDE HT+IGA Sbjct: 255 DVPPTLQNVSVRMLDVGLMQAGASVKGEFEKRLKAVIDEVQASETPIILFIDEAHTLIGA 314 Query: 294 GAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEE 353 G A+G DAANL+KP L+ G++R I +TT+ E+ EKD AL RRFQ + I EPS Sbjct: 315 GGAAG-TGDAANLLKPALARGELRTIAATTWAEYKQHIEKDPALTRRFQVVKIEEPSETV 373 Query: 354 TVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMP 413 V ++ G+ E HH V+ +A+ A+V L+ +YI R LPDKA+ ++D A AR + Sbjct: 374 AVLMLRGVAGVLEQHHKVQILDEAIEASVSLSHRYIPARQLPDKAVSLLDTACARVAVSQ 433 Query: 414 VSKRKKTVNVADIESVVARIARI 436 + + ++ + I Sbjct: 434 HATPAEVEDILRRRQALEVEEGI 456 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 114/366 (31%), Positives = 179/366 (48%), Gaps = 13/366 (3%) Query: 394 LPDKAIDV--IDEAGARARLMPVSKRK--KTVNVADIESVVARIARIPEKSVSQSDRDTL 449 +PD A D+ + E A +V+ + +VV IP + S + Sbjct: 581 VPDSAADLARLRELMAELAEAQGETPLILPSVDRNAVAAVVQDWTGIPTGRMLSSQTEKA 640 Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 L L V GQD A+E + ++ +RAGLG KPVG FL GP+GVGKTE + L+ Sbjct: 641 LKLAATLAERVVGQDHAMEMIARRVQTSRAGLGAPEKPVGVFLLCGPSGVGKTETALALA 700 Query: 510 KALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI 566 + L L+ +MSE+ E HTVS L GAPPGYVG+ +GG+LT+AV + P++V+LLDE+ Sbjct: 701 ETLYGGEQNLISINMSEFQEAHTVSTLKGAPPGYVGYGKGGILTEAVRRKPYSVILLDEV 760 Query: 567 EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNST 626 EKAHPDV I QV D G + D+ GR+ DF+N ++++T+N G ++ + Sbjct: 761 EKAHPDVHEIFFQVFDKGMMDDSEGRRIDFKNTLILLTSNVGSEVIMDRTKNGTLRTGMD 820 Query: 627 DAMEEIK----KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ-KGVSLE 681 D ++ K+F F R+ I + LS +I + ++ +L L Sbjct: 821 DLDTALRGPLLKVFPAAFLGRV-VTIPYYPLSDAMIEAITRHQFGKIARRLKATNDAELV 879 Query: 682 VSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNE 741 + + + + + G R + ++ + L L+ +L SL V + Sbjct: 880 IGDGVMDMVKARCTEIESGGRMIDAILTNTLLPELSRGVLNRSLEGKKMTKVTVGASSEG 939 Query: 742 LTYGFQ 747 TY F+ Sbjct: 940 FTYSFE 945 >UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ClpB n=51 Tax=Proteobacteria RepID=Q3JL54_BURP1 Length = 1042 Score = 337 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 156/449 (34%), Positives = 222/449 (49%), Gaps = 15/449 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE--ALEACSVDLVALRQELE 59 LN +L A RH+ + VEHLL L PSA L AC D LR++ + Sbjct: 13 LNPYCRNALESAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRACGADAARLRRQAD 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFS---- 114 A ++ PA + R S +LQ A G + A VL A + Sbjct: 73 AALD----ARPAGDGGR-PAFAPSLLALLQDAWLIASLELGDTHIRSAAVLAAAVARAAR 127 Query: 115 EQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQA-GGEERMENFT 173 + +L+ L R E S + P + + Sbjct: 128 QPSPGGDDVLQSLRKDALVARFASGACARSIESRASGALDAAPGEASDTRDASSAIARYC 187 Query: 174 TNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 + AR GGIDP+ GR+ E+ + + +L RRRKNNP+ VGE GVGKTA+ EGLA RI + Sbjct: 188 EDFTAKARAGGIDPVFGRDAEIRQIVDILARRRKNNPVCVGEPGVGKTAVVEGLALRIAE 247 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIG 292 GDVP + T+ LD+G L AG +G+FE+R K ++ ++ +LFIDE HT+IG Sbjct: 248 GDVPATLRGATLLGLDLGMLQAGASVKGEFEQRLKRVIAEIRASQTPVVLFIDEAHTLIG 307 Query: 293 AGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIE 352 A + G DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ + + P + Sbjct: 308 A-GGAAGASDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDSPDVA 366 Query: 353 ETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM 412 +V I+ GLK +Y+ H V A+ AA EL+ +YI R LPDKAID++D A AR ++ Sbjct: 367 TSVMILRGLKERYQDAHGVTIRDDALVAAAELSARYITGRQLPDKAIDLLDTACARVKVR 426 Query: 413 PVSKRKKTVNVADIESVVARIARIPEKSV 441 +K + + R R + Sbjct: 427 QQTKPAALEDAQRAIQALERERRALRDEL 455 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 11/353 (3%) Query: 411 LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 + V+ I VVA I + + + + L D L+ + GQD AIE + Sbjct: 613 QRDTPLVRIDVDPDAIADVVADWTGIAAGKLRRDRANVMLRLADTLRRRIRGQDHAIEQI 672 Query: 471 TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMER 527 +EA+K AG+ +P+G FL AGP+G GKTE + ++ AL + ++ +MSE+ ER Sbjct: 673 SEAVKAGAAGVHDPRRPLGVFLLAGPSGTGKTETALAVADALFGDERSIVVVNMSEFQER 732 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLT 587 H VSRLIG+PPGYVG+ +GG+LT+AV + P++V+LLDE+EKAHPDV N+ QV D G+L+ Sbjct: 733 HDVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAHPDVLNLFYQVFDKGSLS 792 Query: 588 DNNGRKADFRNVVLVMTTNAGVRETER---KSIGLIHQDNSTDAMEEIKKIFTPEFRNRL 644 D G++ DF N V+ +T+N G + + + F P R+ Sbjct: 793 DGEGKEVDFANTVIFLTSNLGADIIADIAARGARPDPDAMRAAVRPALSRHFKPALLARM 852 Query: 645 DNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVS-LEVSQEARNWLAEKGYDRAMGARP 703 I + L+ D + + + + ++ + + + +A + + GAR Sbjct: 853 TEIP-YAPLAPDTLADIARLKLERIATRVAAQHATRIVYDDAVVAHVAARCTEVESGARN 911 Query: 704 MARVIQDNLKKPLANELL--FGSLVDGGQVTVALDKEKNELTYGFQSAQKHKA 754 + ++Q ++ LA +L G+ + VA+D + A Sbjct: 912 VDFILQRHVLPALAQHVLVCAGNAAPMPAIRVAIDA-GGRFVVSNDAPADSDA 963 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 81/241 (33%), Gaps = 46/241 (19%) Query: 186 DPLIGREKELERAIQVLC---------RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 + G++ +E+ + + RR LL G SG GKT A +A + + Sbjct: 660 RRIRGQDHAIEQISEAVKAGAAGVHDPRRPLGVFLLAGPSGTGKTETALAVADALFGDER 719 Query: 237 PEVMADCTIYSL--DIGSLL-AGTKYRGDFEKRFKA-----------LLKQLEQDTNSIL 282 V+ + + + D+ L+ + Y G E LL ++E+ +L Sbjct: 720 SIVVVNMSEFQERHDVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAHPDVL 779 Query: 283 FIDEIHTIIGAGAASGG---QVDAAN---LIKPLLSSGKIRVIGST----TYQEFSNIFE 332 + + + G+ S G +VD AN + L + I I + Sbjct: 780 NL--FYQVFDKGSLSDGEGKEVDFANTVIFLTSNLGADIIADIAARGARPDPDAMRAAVR 837 Query: 333 K------DRALARRFQKIDITEPSIEETVQI----INGLKPKYEAHHDVRYT-AKAVRAA 381 AL R +I + + I + + + A H R AV A Sbjct: 838 PALSRHFKPALLARMTEIPYAPLAPDTLADIARLKLERIATRVAAQHATRIVYDDAVVAH 897 Query: 382 V 382 V Sbjct: 898 V 898 >UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TPV1_CITRO Length = 835 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 159/459 (34%), Positives = 239/459 (52%), Gaps = 12/459 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREA--LEACSVDLVALRQELE 59 LN +L A R+R H F+ EHLLLALL + A L+ + + ALR E+ Sbjct: 10 LNPVCLYALEQAAGRSRAQGHWFVEPEHLLLALLDDEHCDLACCLDGAGIPVDALRDEIR 69 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 Q + R + +L+ A+ +V A +L+ + + + Sbjct: 70 RAQSQF-----RTGCTRMPVFSAQLVELLEGALLLTTFRQLKQVRSALLLLTLLTRDRLR 124 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A L + + + + + +++ G+ ++ +T +L + Sbjct: 125 A-QLAQGLPLLLKISAEQLEDHWLNWCRGSAEAVSDRSDADAAVRGDSVLDQYTHDLTRE 183 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 AR G IDP+IGR+ E+ + I +L RRR+NNP+LVG GVGKTA+AEGLA RI +G VP Sbjct: 184 ARQGRIDPIIGRDAEIRQCIDILLRRRQNNPILVGAPGVGKTAVAEGLALRIAEGSVPPP 243 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASG 298 + D + SLD+G L AG +G+FE+R K +++ +++ +LFIDE HT+IGAG A G Sbjct: 244 LRDVALLSLDLGLLQAGAGVKGEFEQRLKGVIEAVKKSSQPIVLFIDEAHTLIGAGGAEG 303 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G DAANL+KP L+ G++R I +TT+QE+ FEKD AL RRFQ+I I EP + V ++ Sbjct: 304 GS-DAANLLKPALARGELRTIAATTWQEYKKYFEKDPALDRRFQRIHIEEPDEDSAVMML 362 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 + K EAHH V+ A+R AV L+ +YI+ R LPDKAI V+D A +R L Sbjct: 363 RAVADKLEAHHGVQILDTAIREAVRLSQRYISGRQLPDKAISVLDTACSRVALAQHDIPP 422 Query: 419 KTVNVADIESVVARIA--RIPEKSVSQSDRDTLKNLGDR 455 V + + + E V D L +L + Sbjct: 423 ALEEVRQQLATIEEESVRLNRELLVGIDHHDRLCDLEAQ 461 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 8/316 (2%) Query: 398 AIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 A+ E A V V+ A + +V+ IP + + L+ L +R+ Sbjct: 515 ALIGKLETAAVQLRDEVPLVPDCVDAATVAAVIGGWTGIPIGQMLTDEAHALRTLVERMS 574 Query: 458 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI--- 514 V GQ A+E + ++ R+GL KPVG FL GPTGVGKTE L+ AL Sbjct: 575 ERVMGQRAALETIARRLRAYRSGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGER 634 Query: 515 ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVF 574 L+ ++SEY E HTVS+L GAPPGYVG+ GG LT+AV + P++V+LLDEIEKAHPDV Sbjct: 635 NLITINLSEYQEAHTVSQLKGAPPGYVGYGSGGALTEAVRRRPYSVVLLDEIEKAHPDVL 694 Query: 575 NILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER-KSIGLIHQDNSTDAMEEIK 633 V D G + D G DF+N V++ T+N G + + +T EE+ Sbjct: 695 EAFYNVFDKGVMEDGTGLIVDFKNTVMLATSNVGAELILETPTSEFNSEWFNTAMREELL 754 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ-LDQKGVSLEVSQEARNWLAE 692 + F P F R+ + + L + + +V + +L + L G L + + + Sbjct: 755 RHFRPAFLARMT-TVAYRALDEETLKGIVLAKLEKLAQRYLVATGEKLNMEDGLVERVMD 813 Query: 693 KGYDRAMGARPMARVI 708 + + +GAR + ++ Sbjct: 814 QC--KGVGARDIENLV 827 >UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BFB3_9FIRM Length = 843 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 150/434 (34%), Positives = 235/434 (54%), Gaps = 19/434 (4%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALL--SNPSAREALEACSVDLVALRQELEA 60 +Q + A A + ++ H+ A+L R + V + + E Sbjct: 7 SQSSVEIIKEANKVAIRKNNVEVSDLHIFYAILTLEEKLIRTYFKELKVIYQDVLDDTEN 66 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + L +++ + S+QR L A ++ ++ ++++A+ E + Sbjct: 67 ALTK----LRSAKGISSLYTSRSYQRALLIAEEISRNQFEEKIKTEHLMLALLREADMPT 122 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 A L H ++ + ++ +E + T L + A Sbjct: 123 AKLAATHGLTYKNFNELVAK-----------KFNEYLLKGVDQETIINLEKYGTVLTKEA 171 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 G +DP+IGRE+E AI++L RR KNNP+L+G++GVGKTAI EG+ RIV GDVP+ + Sbjct: 172 IEGRLDPVIGREEETRTAIRILSRRIKNNPVLIGDAGVGKTAIVEGIVQRIVAGDVPDDL 231 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASGG 299 D I+SLD+ SL+AG KYRGDFE+R K +L+ ++ ILFIDEIH IIG+G+AS G Sbjct: 232 KDKIIFSLDMTSLVAGAKYRGDFEERLKKILEIIKDSKGRIILFIDEIHNIIGSGSAS-G 290 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 +D AN++KP+L+ G I IG+TT +E+ E D+AL RRFQKI I EPSIE T+ I+ Sbjct: 291 TMDTANMLKPMLARGDILTIGATTIEEYRKYIEVDKALDRRFQKILIEEPSIETTIAIMR 350 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+K KYE HH ++ T A+ AV+L+ +++ +R LPD AIDVIDEA A+ ++ K ++ Sbjct: 351 GIKSKYENHHMIKITDPALTEAVKLSKRFLTERKLPDVAIDVIDEACAQVKMARDQKPEE 410 Query: 420 TVNVADIESVVARI 433 + + Sbjct: 411 LDELHRKIIQLEME 424 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 87/365 (23%), Positives = 177/365 (48%), Gaps = 26/365 (7%) Query: 396 DKAIDVIDEAGARARLMPVSKRKKTVN----VADIESVVARIARIPEKSVSQSDRDTLKN 451 DK + + D + + + + V++++ ++++++ +P+ + D++ Sbjct: 498 DKFVSLKDNVSEKLKKIENQGEFYPLRTKVGVSEVKDIISKMSGMPKSKLQYDKLDSINI 557 Query: 452 LGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA 511 + ++LK G D I+ + +A GL KPV SF+ GP+ GK+ + L+ Sbjct: 558 VREKLKEEFVGGDDMIDKIINTYIIAEGGLFERSKPVLSFIVTGPSSSGKSYIAKLLADY 617 Query: 512 LG---IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEK 568 L LL FDMSE+ ++ ++++LIGAPPGYVG++ GG+LT A+ P++VL+ + IE Sbjct: 618 LYEGDKSLLSFDMSEFTDKSSITKLIGAPPGYVGYEFGGVLTQALRTKPYSVLVFENIEN 677 Query: 569 AHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDA 628 AH +V N++LQ++ +GT+ DN GR + +N ++V+T D Sbjct: 678 AHFEVQNLVLQIVQDGTIKDNKGRDINLKNSIVVLTMTV------------------EDG 719 Query: 629 MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARN 688 E K+ +F +D + L D + +++ EL+ L ++ ++L + + Sbjct: 720 DESAKEKLDVDFGKYVDYVFKLKRLDDDKLDKLISLNFKELEKALAERQINLSYAGGFFD 779 Query: 689 WLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQS 748 + D AR + ++I+ ++ + + L + ++ + D E N+ T + Sbjct: 780 KFGKYAKDEGFDARSLKKLIEQDVYFLICEKNLTSEIKAFSELILDFDGE-NKFTVKLKE 838 Query: 749 AQKHK 753 + Sbjct: 839 KNNKE 843 >UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_ECOLX Length = 919 Score = 335 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 153/501 (30%), Positives = 244/501 (48%), Gaps = 25/501 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 LN + +L MA + + +TV H+LL +L+ P R E + LRQ L Sbjct: 13 LNPFAKQALEMAASECMSQQASEITVAHVLLQMLAIPRNDVRVIAERTGISAEDLRQALT 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQES 118 +E A E + L+ + +E+ +L+ + Sbjct: 73 --VESYPGGRSA---EGYPSFSPMLIEWLKESWLLASAQMQHSELRSGVLLLTLLHSPLR 127 Query: 119 QAAYLLRKH--EVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNL 176 + ++R + + T++ + G P + E + + N+ Sbjct: 128 YIPPAAARLLTAINRDQLQQDFAAWTKESAESVDLAGGQTPRATETGDTL--LARYAKNM 185 Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 AR G +DP++ R E++ I +LCRRRKNNP++VGE+GVGK+A+ EGLA RIV G V Sbjct: 186 TADARNGRLDPVLCRNYEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRIVAGQV 245 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIHTIIGAGA 295 P+ + + I +LD+G+L AG +G+FEKRFK L+ ++ ILFIDE HT+IGAG Sbjct: 246 PDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIFSPVPVILFIDEAHTLIGAGN 305 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 GG +D +NL+KP L+ G+++ I +TT+ E+ FEKD AL+RRFQ + ++EP+ E Sbjct: 306 QQGG-LDISNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEAT 364 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 I+ GL YE H V A++AA L+ +Y++ R LPDKAIDV+D A AR + S Sbjct: 365 IILRGLSAVYEQSHGVLIDDDALQAAATLSERYLSGRQLPDKAIDVLDTACARVAINLSS 424 Query: 416 KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML-----------VFGQD 464 K+ + + R E+ + R + + L+ V Q Sbjct: 425 PPKQISALTTLSHQQEAEIRQLERELRIGLRTDTSRMTEVLEQYDETLSALDELEVAWQQ 484 Query: 465 KAIEALTEAIKMARAGLGHEH 485 + + A++ G+ + Sbjct: 485 QTLVQEIIALRQQLLGVAEDD 505 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 107/345 (31%), Positives = 172/345 (49%), Gaps = 7/345 (2%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 V+ I +V+A +P +SQ++ + +L L + GQD AI +L + + A Sbjct: 571 SPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPVWLGGTIKGQDLAIASLHKHLLTA 630 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 RA L +P+G+FL AGP+GVGKTE +QL++ L L +MSE+ E+HTVSRLI Sbjct: 631 RADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLI 690 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 G+PPGYVG+ +GG+LT+A+ + P++V+LLDE+EKAHPDV N+ Q D G + D GR Sbjct: 691 GSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGEMADGEGRLI 750 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 D +N+V +T+N G + + + F P R+ ++ + LS Sbjct: 751 DCKNIVFFLTSNLGYQVIVEHADDPETM--QEALYPVLADFFKPALLARM-EVVPYLPLS 807 Query: 655 TDVIHQVVDKFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 + + ++ + L L + G + + E + + + GAR + VI ++ Sbjct: 808 KETLATIIAGKLARLDNVLRSRFGADVIIGPEVTDEIMSRVTRAENGARMLESVIDGDML 867 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 PL+ LL + + L T + A A Sbjct: 868 PPLSLLLLQKMAANTAIARIRLSAADGAFTADVEDALPDDAVTPQ 912 >UniRef50_Q9I742 Protein clpV1 n=17 Tax=Proteobacteria RepID=CLPV1_PSEAE Length = 902 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 130/452 (28%), Positives = 225/452 (49%), Gaps = 22/452 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 LN ++ A + + ++ + H +L + + + +D L ++L Sbjct: 13 LNSLAYKAIEAATVFCKLRGNPYVELVHWFHQILQLPDSDLHQIVRQSGIDPARLAKDLT 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 +++ LP + + V + V+ G ++V +++ I + Sbjct: 73 EALDR----LPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVIGILKTPSLR 128 Query: 120 AAYLLRKHEVSRLDVVNFISH--------------GTRKDEPTQSSDPGSQPNSEEQAGG 165 A E ++L V + + S + G Sbjct: 129 HALTGLSAEFAKLKVEALTERFDEYVGASPENGLSASDGFNAGAAPGEASGALAPSAMGK 188 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 +E ++ FT +L + AR G +DP++GR++E+ + + +L RRR+NNP+L GE+GVGKTA+ E Sbjct: 189 QEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTAVVE 248 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILFI 284 G A RIV GDVP + D + +LD+G L AG +G+FE+R + +++ ++ + ILFI Sbjct: 249 GFALRIVAGDVPPALKDVELRALDVGLLQAGASMKGEFEQRLRQVIEDVQSSEKPIILFI 308 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 DE HT++GAG A+G DAANL+KP L+ G +R + +TT+ E+ EKD AL RRFQ + Sbjct: 309 DEAHTLVGAGGAAG-TGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVV 367 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EPS + + ++ G+ E HH V+ +A+ AAV L+ +YI R LPDK++ ++D Sbjct: 368 QVDEPSEHKAILMMRGVASTMEKHHQVQILDEALEAAVRLSHRYIPARQLPDKSVSLLDT 427 Query: 405 AGARARLMPVSKRKKTVNVADIESVVARIARI 436 A AR + + + + + I Sbjct: 428 ACARTAISLHAVPAEVDDSRRRIEALETELAI 459 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 112/340 (32%), Positives = 183/340 (53%), Gaps = 9/340 (2%) Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 TV+ + SVVA IP +++++ +T+ NL LK + GQD A+E + + I+ +R Sbjct: 564 PTVDYQAVASVVADWTGIPVGRMARNEIETVLNLDRHLKKRIIGQDHALEMIAKRIQTSR 623 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIG 535 AGL + KP+G F+ AG +GVGKTE + L++A+ ++ +MSE+ E HTVS L G Sbjct: 624 AGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKG 683 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGY+G+ +GG+LT+AV + P++V+LLDE+EKAHPDV I QV D G + D GR D Sbjct: 684 APPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVMEDGEGRVID 743 Query: 596 FRNVVLVMTTNAGVRET----ERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 F+N ++++TTNAG + + + E + KIF P RL I + Sbjct: 744 FKNTLILLTTNAGTEMIASLCADPELMPEPEAIAKSLREPLLKIFPPALLGRL-VTIPYY 802 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQ-KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 LS D++ + + ++ +++ V E + + + + + G R + ++ + Sbjct: 803 PLSDDMLKAISRLQLGRIKKRVEATHKVPFEFDEGVVDLIVSRCTETESGGRMIDAILTN 862 Query: 711 NLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 L ++ E L L V + N+ Y F A+ Sbjct: 863 TLLPDMSREFLTRMLEGKPLAGVRISSRDNQFHYDFAEAE 902 >UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M6_ORYSJ Length = 388 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 126/338 (37%), Positives = 194/338 (57%), Gaps = 4/338 (1%) Query: 417 RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM 476 + V + VV+R IP ++ Q +++ L +L DRL V GQD+A++ + +A+ Sbjct: 14 NEAIVGPDHVAQVVSRWTGIPVTTLDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLR 73 Query: 477 ARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRL 533 +RAGL +P+GSFLF G TGVGKTE+ L++ L L+RFDMSE++ +V RL Sbjct: 74 SRAGLEQPGQPIGSFLFLGSTGVGKTELAKALAEQLFDSEKMLIRFDMSEFVGSGSVLRL 133 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRK 593 IGAPP Y G GG LT+ V P++V+L DE+EKA P VFN+ LQ++D+G LTD GR Sbjct: 134 IGAPPSYHGHQDGGQLTEKVRTRPYSVILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRT 193 Query: 594 ADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD-AMEEIKKIFTPEFRNRLDNIIWFDH 652 DF+N +++MT+N G G + + D M++++K F PE NRL I+ F+ Sbjct: 194 VDFKNTIIIMTSNLGAEHLTEGVTGERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEP 253 Query: 653 LSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNL 712 LS D + +VV + + + KGVSL S +A + + + Y+ GARP+ R +Q N+ Sbjct: 254 LSHDNLKEVVKIQMKSVVTSVAHKGVSLLASDDALDVILSESYNPMYGARPVRRWVQKNV 313 Query: 713 KKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 L+ L+ G G +++ +K L + + Sbjct: 314 MTKLSEMLITGDAGQGSTISIDATDDKKGLNFQVLKEE 351 >UniRef50_Q25823 Clp (C?) protein n=14 Tax=Haemosporida RepID=Q25823_PLAF7 Length = 766 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 158/570 (27%), Positives = 276/570 (48%), Gaps = 57/570 (10%) Query: 197 RAIQVLCRRRKNNPLLVGESGVGKTAIA--EGLAWRIVQGDVPEVMADCTIYSL------ 248 + +Q+L + K + +L GV + L I +P + I+ L Sbjct: 180 QLLQILNLKIKKHIIL---EGVNDNIFIFLQLLINNIKNKIIPIYLKYTEIWVLNDLLTY 236 Query: 249 DIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFID--EIHTIIGAGAASGGQVDAANL 306 DI +L+ + + K IL I EI + ++ L Sbjct: 237 DIQTLIY----------KILNISKYFTNKYKLILIIKNIEIFNLSDNINNDNNKLYYLFL 286 Query: 307 IKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYE 366 + L I +I T +E++ F+ + F KI I + SI +T II KY Sbjct: 287 LLNKLYGYNIHIIIVTNKKEYNTYFKYNIIKDSYFYKIRIKDLSILQTFLIIKNNIYKYI 346 Query: 367 AHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT------ 420 ++ + + + L+ KYI LP + +++ + + L+ Sbjct: 347 NYYKININNYIIYELINLSKKYIKPLILPTTPLILLENSCSNKYLLNNKISYSNFNYLFT 406 Query: 421 -------------VNVADIESVVARIARIPEKSVSQSDRD---TLKNLGDRLKMLVFGQD 464 + + DI++ ++ I + + + ++ L L + L ++GQ+ Sbjct: 407 YNNNIIYNNKNNNLTIEDIKNSISNYLNISKTILFKDNKLTKLNLTKLENYLYNHIYGQN 466 Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDM 521 + IK GL +++KP+GS++ GP+G GKTE+ LSK L EL+RFDM Sbjct: 467 HIFNKIIPFIKQNFIGLKNKNKPIGSWILCGPSGTGKTELAKILSKQLFGSEKELIRFDM 526 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM 581 SEYME+H++SRLIG+PPGYVG+ +GG LT+ V K P++V+L DEIEKAHPD++NI+LQ++ Sbjct: 527 SEYMEKHSISRLIGSPPGYVGYSEGGQLTEQVYKKPNSVILFDEIEKAHPDIYNIMLQIL 586 Query: 582 DNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAME-------EIKK 634 D G LTD+ G+ DF + ++++T+N G + + + + +D E I Sbjct: 587 DEGRLTDSTGKLIDFTHTIILLTSNLGCPKNYDLYLKNKNFLSKSDLKEIEKNIKININN 646 Query: 635 IFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK--GVSLEVSQEARNWLAE 692 F PE NRL NI+ F+ L+ + + + +KFI EL+++L + + +++E + +L + Sbjct: 647 YFKPELLNRLTNILIFNPLNINNLLFIFNKFINELKIKLYLNKLNIIIHINKELKYFLVK 706 Query: 693 KGYDRAMGARPMARVIQDNLKKPLANELLF 722 Y+ GARP+ R+++ K +++ LL Sbjct: 707 LMYNPLYGARPLKRILELIFDKSISDLLLT 736 >UniRef50_A9FG71 ATPase with chaperone activity, two ATP-binding domains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FG71_SORC5 Length = 871 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 203/799 (25%), Positives = 327/799 (40%), Gaps = 76/799 (9%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELEA 60 + L L A A + + + +EHLL AL A E L + + A R L A Sbjct: 89 SPRLLDLLGRAEREATRDKSQNVGIEHLLHALAQEIRGPAGEILSSFGIGPGAFRPHLGA 148 Query: 61 FIEQTTPVLPASEEERDT-QPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + PA + QP + ++ A A L+ I + Sbjct: 149 LEAASREPSPAPANAAEPGQPAPYTRDLVADAREGRFDPVIGRDVEARRLLQILERRFKN 208 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSS--------DPGSQPNSEEQAGGEERMEN 171 ++ + V + ++ ++ + + D G+ + G E+ Sbjct: 209 HPLIVGEPGVGKTALIRGLADRIAHGDVPTNLAGAHLYELDTGALVAGAKLRGEIEQRLK 268 Query: 172 FTTN-LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV-GESGVGKTAIAEGLAW 229 + L I + + + +Q PLL GE + T EG+ Sbjct: 269 VLVDRLRGEQDAESILVVEDLDALFGQGVQGAGVGELLKPLLSRGEIRIIATTTPEGV-- 326 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL---FIDE 286 R + P ++ + +L+ S+ T + + + + E + I Sbjct: 327 RKINERDPGIIRRFSTITLEAPSIDQAT-------EILRGIATKYEAHHRVRVGESAITS 379 Query: 287 IHTIIGAGAASGGQVDAA-NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 + + D A +L+ + ++ V G E L RR + Sbjct: 380 AVALAKRYISDRALPDTAVDLLDETSARKRVEVDGV--PAELD-------TLTRRVDALR 430 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY----------------- 388 ++ + ++ KA A + Sbjct: 431 AQIAALADDDDKLSVQTRTRLEAELAEIEPKASSMRSRNASRRGVIAACQAIRRELVAAT 490 Query: 389 -INDRHLPDKAIDVIDE---------------AGARARLMPVSKRKKTVNVADIESVVAR 432 DKA I E A A+ V+ V +D+ + + Sbjct: 491 EALKAAQRDKAFAKIGELEHVTLPEIRRRLQAAEEAAQREGVAPTSNVVAESDVAATLND 550 Query: 433 IARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFL 492 IP + + + + L + RL V GQD+A+ A+ +A++ R GL KP+GSFL Sbjct: 551 WTGIPVAKMLEGEAEKLLKMEARLAQRVVGQDEAVRAIAKAVRRGRVGLRDPGKPIGSFL 610 Query: 493 FAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 F GP+GVGKTE+ L++ L + L R DMSE+MERH RLIGAPPGY +QGG L Sbjct: 611 FLGPSGVGKTELAKALAEFLFDDEQALTRMDMSEFMERHMAQRLIGAPPGYADSEQGGFL 670 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGV 609 T+A + P++VLL DE+EKAH DVFN+LLQ++D+G LTD GR ADF N V++MT+N G Sbjct: 671 TEAARRRPYSVLLFDEVEKAHADVFNLLLQILDDGRLTDGRGRLADFSNTVVIMTSNIGS 730 Query: 610 RETERKSIGLIHQDNSTDA-----MEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDK 664 + L ++ +A +EE++ F PEF NR+D+I+ F LS + + +VD Sbjct: 731 KRVLETDAKLWTTEDGREAIRDVLLEELRGFFRPEFLNRVDDIVVFKALSKEDLRGIVDI 790 Query: 665 FIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGS 724 + L+ L K + L ++ A+ L E GY+ ++GARP+ R I L+ PLA +L G Sbjct: 791 QLRRLEQLLTDKDIRLALTDAAKARLVELGYEPSLGARPLKRAILRELQNPLAETILAGG 850 Query: 725 LVDGGQVTVALDKEKNELT 743 G + V + EK T Sbjct: 851 YQPGQTMQVDVVDEKFVFT 869 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 140/459 (30%), Positives = 210/459 (45%), Gaps = 18/459 (3%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA-REALEACSVDLVALRQELEAF 61 + + + A A E +H +T HLL+ LL E D + Q E Sbjct: 14 TGDAKQVVAGAQQIADERQHAEVTPLHLLMRLLERDRGVSEVFRRAGADPNEVLQLAENA 73 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 +++ L + + +L RA V ++L A+ E A Sbjct: 74 LKK----LSRAGSSGVAYVSPRLLDLLGRAEREATRDKSQNVGIEHLLHALAQEIRGPAG 129 Query: 122 YLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLAR 181 +L + + + + + +T +L AR Sbjct: 130 EILSSFGIGPGAFRPHLGALEAASREPSPAPANAAEPGQPAP--------YTRDLVADAR 181 Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA 241 G DP+IGR+ E R +Q+L RR KN+PL+VGE GVGKTA+ GLA RI GDVP +A Sbjct: 182 EGRFDPVIGRDVEARRLLQILERRFKNHPLIVGEPGVGKTALIRGLADRIAHGDVPTNLA 241 Query: 242 DCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE--QDTNSILFIDEIHTIIGAGAASGG 299 +Y LD G+L+AG K RG+ E+R K L+ +L QD SIL ++++ + G G G Sbjct: 242 GAHLYELDTGALVAGAKLRGEIEQRLKVLVDRLRGEQDAESILVVEDLDALFGQGVQGAG 301 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 + L+KPLLS G+IR+I +TT + I E+D + RRF I + PSI++ +I+ Sbjct: 302 VGE---LLKPLLSRGEIRIIATTTPEGVRKINERDPGIIRRFSTITLEAPSIDQATEILR 358 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 G+ KYEAHH VR A+ +AV LA +YI+DR LPD A+D++DE AR R+ + Sbjct: 359 GIATKYEAHHRVRVGESAITSAVALAKRYISDRALPDTAVDLLDETSARKRVEVDGVPAE 418 Query: 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKM 458 + + + T L L Sbjct: 419 LDTLTRRVDALRAQIAALADDDDKLSVQTRTRLEAELAE 457 >UniRef50_B1GUR2 ATP-dependent Clp protease-like protein n=1 Tax=Geobacillus stearothermophilus RepID=B1GUR2_BACST Length = 424 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 136/435 (31%), Positives = 234/435 (53%), Gaps = 26/435 (5%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSA--REALEACSVDLVALRQEL 58 M + +L+ SL++A +A + + EHLL L+++ + L +DL +++E+ Sbjct: 3 MFSSDLQNSLSLAKQQAWKFGVSEIKSEHLLWGLIADTKFNSAQILINAGIDLDVVKKEI 62 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 E+ + P SE ++ +L A H +N + ++L ++ S + Sbjct: 63 ESKLTSIKPGRMYSENGEKI-----YKSMLSLAEHH-----QNIIDTQHLLYSLIS-TDC 111 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 +++K L + + + T + ++ + +L Sbjct: 112 TGTNIIKKIGGDPLRIKSLCLEYINGESLTSTY------------YNTPNLDKYCIDLTD 159 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 L+ G + +GREKE++ VL +++K N ++ G GVGKT++ EGLA RI +V + Sbjct: 160 LSTKGKLSFPVGREKEIDILQTVLLKKKKRNIVITGLPGVGKTSLVEGLAIRITSKEVSK 219 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 + + I SL + SL+AGTK+RG+FE+R ++++L N +LFIDEIHT+IGAG A Sbjct: 220 KLYNLKIKSLSLASLVAGTKFRGEFEERLVGIVEELSMYPNIVLFIDEIHTLIGAG-AVP 278 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 G +DA+N++KP+L++G IG+TT +E+ F+KD AL RRFQ+I + EPS ET++I+ Sbjct: 279 GGLDASNILKPVLATGNFICIGATTEEEYEKYFKKDAALDRRFQRIPLQEPSKTETLKIL 338 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 + L +Y +H+V Y+ + + VELA KY DR+ PDKAID++D GA+ Sbjct: 339 SVLSHEYGKYHNVFYSQEVLEEIVELADKYFPDRYFPDKAIDLLDYVGAKNSHKFTYNEV 398 Query: 419 KTVNVADIESVVARI 433 ++ DIE + + Sbjct: 399 YKISKLDIERATSDL 413 >UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organisms RepID=CLPB2_SYNPX Length = 900 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 145/444 (32%), Positives = 229/444 (51%), Gaps = 30/444 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAF 61 + L AR RH+ + VEHL+ L S+ S R +E + L LE Sbjct: 18 FSDPAWELLLAGQDMARRWRHDQLDVEHLIQVLFSDSSFRRWVEPLPLRSDDLLDRLEDV 77 Query: 62 IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121 + P +++L+ A G + ++VA+ ++ A Sbjct: 78 LADQPPAR-----GDQLFIGEDLEQLLETADQVRGRWGDRSIDVPQLIVAVGADPR-IGA 131 Query: 122 YLLRKHEVSRLDVVNFISHGTR--------------------KDEPTQSSDPGSQPNSEE 161 L ++ + + + + + P E Sbjct: 132 ELFAAQGLAVDRLESLLRQPSVSPAPAPPPVPTAASAPAPTPRSAPAPRVMAPEPEPMVE 191 Query: 162 QAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKT 221 +E + +L + A G +DP+IGR+ E+ I+VL RR KNNP+L+GE GVGKT Sbjct: 192 LEREPSALEAYGRDLTEEAEAGSLDPVIGRDSEIRNLIKVLSRRSKNNPVLIGEPGVGKT 251 Query: 222 AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNS 280 AIAE LA RIV G+VP+ + + +LD+G+L+AG K+RG FE+R +++L+++ D+ Sbjct: 252 AIAELLAQRIVAGEVPDSLQGLRLIALDLGALIAGAKFRGQFEERLRSVLEEVSRSDSGV 311 Query: 281 ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR 340 +LFIDE+HT++G + DA +L+KP L+ G +R IG+TT +E+ EKD AL RR Sbjct: 312 VLFIDELHTVVG---SDRSSTDAGSLLKPALARGDLRCIGATTPEEYRRTVEKDPALNRR 368 Query: 341 FQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 FQ++ I EP +E +++I+ GL+ +YE HH V T +A++ A LA +YI+DR LPDKAID Sbjct: 369 FQQVLIREPDLELSLEILRGLRERYELHHGVTITDEAIQTANRLADRYISDRCLPDKAID 428 Query: 401 VIDEAGARARLMPVSKRKKTVNVA 424 +IDEA A+ ++ SK + Sbjct: 429 LIDEAAAQLKIEVTSKPQVVEEAE 452 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 150/419 (35%), Positives = 222/419 (52%), Gaps = 13/419 (3%) Query: 337 LARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPD 396 L RR+Q E + E + + A+ A L ++ Sbjct: 490 LRRRWQ----EERTQLEELGQLLQQDEDLRHAIAEAEREGALEEAARLQYDQLHTVQQRR 545 Query: 397 KAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL 456 +A++ A A+ + ++ V DI +VAR IP + + +R L L L Sbjct: 546 EALEASQ---AEAQSAGTALLREQVEAGDIADLVARWTGIPVQRLLAGERRKLLALESHL 602 Query: 457 KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE- 515 V GQ +A+ A+ AI+ ARAG+ +PVGSFLF GPTGVGKTE+ L+ +L E Sbjct: 603 SERVIGQVEAVAAVAAAIRRARAGMKDPRRPVGSFLFLGPTGVGKTELAKALATSLFDEE 662 Query: 516 --LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV 573 L+R DMSE+MER+ +RLIGAPPGYVG+++GG LT+AV + P+AVLLLDE+EKAHPDV Sbjct: 663 EALVRLDMSEFMERNASARLIGAPPGYVGYEEGGQLTEAVRRRPYAVLLLDEVEKAHPDV 722 Query: 574 FNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN--STDAMEE 631 FN+LLQV+D+G LTD+ G DFR+ V+VMT+N + D Sbjct: 723 FNLLLQVLDDGRLTDSQGLTVDFRHTVVVMTSNLASPVILEHARSGSSDDAQLQQQVDAA 782 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLA 691 + F PEF NR+D +I F L + ++V + +L + ++G+SLEV + LA Sbjct: 783 LSSQFRPEFLNRIDEVIRFRPLKVKDLVRIVRLQLADLSTLMAEQGLSLEVDDAVADSLA 842 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQ 750 +G++ GARP+ RV++ L+ PLA +LL + V + + F+ + Sbjct: 843 RQGHEPEYGARPLRRVLRRQLENPLATQLLEERFRSAHGIRVRCGTDDGA-SLEFEPLE 900 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 14/117 (11%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD-CTIYSLDIGSLLAGT--KYR 260 RR + L +G +GVGKT +A+ LA + + V D + + L G Y Sbjct: 631 RRPVGSFLFLGPTGVGKTELAKALATSLFDEEEALVRLDMSEFMERNASARLIGAPPGYV 690 Query: 261 GDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIR 317 G E L + + + ++L +DE+ D NL+ +L G++ Sbjct: 691 GYEEG--GQLTEAVRRRPYAVLLLDEV---------EKAHPDVFNLLLQVLDDGRLT 736 >UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mutans RepID=CLPB_STRMU Length = 860 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 162/487 (33%), Positives = 260/487 (53%), Gaps = 19/487 (3%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSVDLVALRQELEA 60 + Q +E SL A A HR+ + + HL L+ + A + ++ ++ L + + Sbjct: 5 MTQLVEDSLEEAKELAIAHRNYQLDIPHLWAVLVKPDQFAFQFYQSLEINTNQLIEIINK 64 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 I++ + + + + +L A + +T ++++A+F++Q + Sbjct: 65 EIDKIPVLSSTEKSSYARLYSQRLKNLLDDAHQEMIDLKDQVLTVEHLILALFNQQRNPI 124 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 L + +++ + + + S Q + +E + NLNQ A Sbjct: 125 TVFLLEQGLNKEKLYQKMHRIRKGKPAISS----------SQETIYDALEKYAVNLNQRA 174 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 ++ +IGR+ E+ I++L R+ KNN +LVG SGVGKTAI EG R+V+ VP+ + Sbjct: 175 LDEPVNKIIGRQDEMNDIIRILSRKNKNNAVLVGHSGVGKTAIIEGFVQRLVKNQVPKNL 234 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAASGG 299 IYSLDIG+LLAGTKYRG+FE+RFKALL + + + ILFIDEIH+I+ AG G Sbjct: 235 QGKVIYSLDIGALLAGTKYRGEFEERFKALLNDIIDSNGQIILFIDEIHSIVSAGRTE-G 293 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 VDAA+++KPLL+ GKIR+IGSTT+ E+ E DRAL RRFQ+I + EP ++ T++I+ Sbjct: 294 SVDAASILKPLLARGKIRIIGSTTHAEYRESIEYDRALERRFQRILVHEPDLDYTMEILK 353 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLKP YE H VR + AA L+ +YI+DR LPDKA+D+IDEA A RL + + Sbjct: 354 GLKPIYENFHGVRLEEDGLEAAASLSKRYISDRFLPDKALDLIDEACAAKRLASHAYPVQ 413 Query: 420 TVNVADI---ESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVF-GQDKAIEALTEAIK 475 N++ E + + + L+ L ++ L+ Q + L + ++ Sbjct: 414 MTNLSQQLISEKIRLLRLTDSDTDDKFKLNNHLEQLEEQKSQLLANWQRE--RELLDQVQ 471 Query: 476 MARAGLG 482 R+ L Sbjct: 472 ELRSHLT 478 Score = 318 bits (815), Expect = 5e-85, Method: Composition-based stats. Identities = 202/808 (25%), Positives = 357/808 (44%), Gaps = 93/808 (11%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQEL 58 + +Q L+ L+ A + + + +TVEHL+LAL + L ++ L Q++ Sbjct: 83 LYSQRLKNLLDDAHQEMIDLKDQVLTVEHLILALFNQQRNPITVFLLEQGLNKEKLYQKM 142 Query: 59 EAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHV--QSSGRNEVTGANVLVAIFSEQ 116 I + P + +S+E + QRA+ + GR + +++ + + Sbjct: 143 HR-IRKGKPAISSSQETIYDALEKYAVNLNQRALDEPVNKIIGRQD-EMNDIIRILSRKN 200 Query: 117 ESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE------EQAGGEERME 170 ++ A + V + ++ K++ ++ + + E E Sbjct: 201 KNNAVLVGHS-GVGKTAIIEGFVQRLVKNQVPKNLQGKVIYSLDIGALLAGTKYRGEFEE 259 Query: 171 NFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWR 230 F LN + G +I E+ + R + V + + K +A G Sbjct: 260 RFKALLNDIIDSNG--QIILFIDEIHSIVSA-GRTEGS----VDAASILKPLLARGKIRI 312 Query: 231 IVQ---GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEI 287 I + E + +L E ++ L+ + Sbjct: 313 IGSTTHAEYRESIEYDRALERRFQRIL-------VHEPDLDYTMEILKGLKPIY---ENF 362 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR------F 341 H G G AA+L K +S + + ++ ++ A R Sbjct: 363 H---GVRLEEDGLEAAASLSKRYISDRFL-------PDKALDLIDEACAAKRLASHAYPV 412 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAA-VELAVKYINDRHLPDKAID 400 Q ++++ I E ++++ + + + + +L + +R L D+ + Sbjct: 413 QMTNLSQQLISEKIRLLRLTDSDTDDKFKLNNHLEQLEEQKSQLLANWQRERELLDQVQE 472 Query: 401 VIDEAGARARLMPVSKRKKT------------------------------------VNVA 424 + A ++ V Sbjct: 473 LRSHLTALEEQANLALENNQVADYVRLEDEEIRKCHQKMTALEKERLDSQKIINVTVTRE 532 Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI +VV R+ I + V +++RD L +L + L + GQD+A++ +++AI +RAG+ + Sbjct: 533 DIAAVVERLTGIKVQGVMENERDRLLHLEELLHQKIVGQDQAVQKVSQAIIRSRAGIQNP 592 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYV 541 +P+GSFLF GPTGVGKT + +L++ L E++R DMSEYME+H VSRL+G PPGYV Sbjct: 593 KRPIGSFLFLGPTGVGKTALAKRLAEVLFGSELEMVRLDMSEYMEKHAVSRLVGPPPGYV 652 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+++GG LT+AV + ++++LLDEIEKAHPDVFN LLQV+D G LTD+ GR DF+N +L Sbjct: 653 GYEEGGQLTEAVRQRLYSIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTIDFKNTIL 712 Query: 602 VMTTNAGVRETER--KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 +MT+N G + + G I + ++E+ F PEF NR+D + F+ LS + Sbjct: 713 IMTSNIGSTNILQSLQDSGCITSEVRYKVLDELNHSFRPEFLNRIDETVLFNALSEKDMT 772 Query: 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719 VV + +LQ +L ++ + L +++ LA++G+D A GARPM R I L+ PLA Sbjct: 773 GVVKVMVSDLQARLLEQDIHLTLTESVYILLAKEGFDAAFGARPMQRTIMQKLENPLALY 832 Query: 720 LLFGSLVDGGQ--VTVALDKEKNELTYG 745 L+ + VTV++ +K + T+ Sbjct: 833 LIQNQKNKEKETFVTVSVKDKKLKFTFS 860 >UniRef50_B5FRR8 Chaperone protein clpB n=19 Tax=Gammaproteobacteria RepID=B5FRR8_SALDC Length = 911 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 159/520 (30%), Positives = 255/520 (49%), Gaps = 14/520 (2%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 L + +L A + + +TV H+LL +L+ P R E + LRQ L Sbjct: 13 LAPFAKQALEAAASECMSQQAAEITVAHVLLQMLATPRSDFRVIAERAEIGADDLRQALT 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFSEQES 118 A + + L+ A + E+ G +L+A+ Sbjct: 73 VE-----NYATARSSDSYPSFSPMLVEWLKEAWLLASAEMQQTELRGGVLLLALLHSPLR 127 Query: 119 QAAYLLRKH--EVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNL 176 + ++R + + T++ + + Q S G+ + + N+ Sbjct: 128 YLPPAAARLLTAINRDLLRQDFAGWTKESAESVILNADGQTASAIADTGDTLLARYAKNM 187 Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 AR G +DP++ R+ E++ I +LCRRRKNNP++VGE+GVGK+A+ EGLA RI+ G V Sbjct: 188 TDDARQGRLDPVLCRDNEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRIIAGQV 247 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGA 295 P+ + D I +LD+G+L AG +G+FEKRFK L+ ++ Q ILFIDE HT+IGAG Sbjct: 248 PDKLRDTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIQSPKPVILFIDEAHTLIGAGN 307 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 GG +D +NL+KP L+ G+++ I +TT+ E+ FEKD AL+RRFQ + ++EP+ E Sbjct: 308 QQGG-LDISNLLKPALARGELKTIAATTWSEYKKYFEKDSALSRRFQLVKVSEPNAAEAT 366 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 I+ GL YE H V +A++AA L+ +Y++ R LPDKAIDV+D A AR + S Sbjct: 367 IILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSGRQLPDKAIDVLDTACARVAINLSS 426 Query: 416 KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIK 475 ++ + + R E+ + R L + L + ++AL A + Sbjct: 427 PPRQISALTTLRQQCEAEIRQLEREIRIGLRSDTSRLNEVLAQYDETLSE-LDALEAAWR 485 Query: 476 MARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE 515 + L E + L G E ++A+G + Sbjct: 486 QQQT-LVQEIIALRKGLLDETDATGNDETATPETEAVGSD 524 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 116/453 (25%), Positives = 197/453 (43%), Gaps = 20/453 (4%) Query: 312 SSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING--LKPKYEAHH 369 + ++ + + + S + + A R Q+ + E + + L + Sbjct: 459 DTSRLNEVLAQYDETLSELDALEAAW--RQQQTLVQE------IIALRKGLLDETDATGN 510 Query: 370 DVRYTAKAVRAAVELAVKYINDRHLPDK--AIDVIDEAGARARLMPVSK-RKKTVNVADI 426 D T + + P+ A + L V+ I Sbjct: 511 DETATPETEAVGSDDESVTAPPEAEPEISPAARLAQLTAELDALHHTQLLVSPHVDKKQI 570 Query: 427 ESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 SV+ +P +SQ++ + +L L + GQ AI+ L + + ARA L + Sbjct: 571 ASVITEWTGVPLNRLSQNEMSVITDLPQWLGDTIKGQALAIKHLHKHLLTARADLRRPGR 630 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGF 543 P+G+FL AGP+GVGKTE +QL++ L L +MSE+ E+HTVSRLIG+PPGYVG+ Sbjct: 631 PLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGY 690 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 +GG+LT+A+ + P++V+LLDE+EKAHPDV N+ Q D G + D GR D +NVV + Sbjct: 691 GEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGEMADGEGRLIDCKNVVFFL 750 Query: 604 TTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVD 663 T+N G + + + F P R+ ++ + LS + + ++ Sbjct: 751 TSNLGYQVIVEHADNPEAM--QEALYPVLADFFKPALLARM-EVVPYLPLSRETLAVIIA 807 Query: 664 KFIVELQVQLDQK-GVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 + L L + G + + E + + ++ GAR + VI + PL+ LL Sbjct: 808 GKLARLDNVLRARFGAEVVIEPEVTDEIMQRVTRAENGARMLESVIDGEMLPPLSLLLLQ 867 Query: 723 GSLVDGGQVTVALDKEKNELTYGFQSAQKHKAE 755 + + L T + + Sbjct: 868 KMAANIAIARITLGVANGAFTADVEDVPDEDTQ 900 >UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ClpB n=5 Tax=Proteobacteria RepID=Q2T6Y8_BURTA Length = 958 Score = 330 bits (847), Expect = 9e-89, Method: Composition-based stats. Identities = 160/503 (31%), Positives = 238/503 (47%), Gaps = 34/503 (6%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSARE--ALEACSVDLVALRQELE 59 LN +L A RH+ + VEHLL L PSA L A D LR++ + Sbjct: 13 LNPYCRTALENAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRASGADAARLRRQAD 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQ-SSGRNEVTGANVLVAIFS---- 114 A ++ + S +LQ A G ++ A VL A + Sbjct: 73 AALDARP-----AGGGGRPAFAPSLLALLQDAWLIASLELGETQIRSAAVLAAAVARAAR 127 Query: 115 EQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSS-----DPGSQPNSEEQAGGEERM 169 + +L+ R +V +H + ++ PG ++ + Sbjct: 128 QPSRGGDDMLQSLR--RDALVARFAHACAQSIESRGPGARDAAPGDANDTPGAHDASSAI 185 Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAW 229 + + AR G IDP+ GR+ ++ + + +L RRRKNNP+ VGE GVGKTA+ EGLA Sbjct: 186 ARYCEDFTAKARAGRIDPVFGRDAQIRQIVDILARRRKNNPVCVGEPGVGKTAVVEGLAL 245 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT-NSILFIDEIH 288 RI +GDVP + T+ LD+G L AG +G+FE+R K ++ ++ +LF+DE H Sbjct: 246 RIAEGDVPAALRHATLLGLDLGLLQAGASVKGEFEQRLKRVIAEIHASQAPVVLFVDEAH 305 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 T+IGAG +G DAANL+KP L+ G++R I +TT+ E+ FEKD ALARRFQ + + Sbjct: 306 TLIGAGGPAGAS-DAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDS 364 Query: 349 PSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGAR 408 P + +V I+ GLK +Y+ H V A+ AA EL+ +YI R LPDKAID++D A AR Sbjct: 365 PDVATSVMILRGLKERYQDAHGVTIRDDALVAAAELSERYITGRQLPDKAIDLLDTACAR 424 Query: 409 ARLMPVSKRKKTVNVADIESVVARIA-------------RIPEKSVSQSDRDTLKNLGDR 455 ++ +K + + R P + + L D Sbjct: 425 VKVRQQTKPAALEDAERAIQALERERRALRRDLAERCAPDTPRVADIDRELAALSARADA 484 Query: 456 LKMLVFGQDKAIEALTEAIKMAR 478 L Q A +AL EA + R Sbjct: 485 LSEAWAAQRDAAQALVEARRACR 507 Score = 272 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 105/340 (30%), Positives = 173/340 (50%), Gaps = 11/340 (3%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 + V+ I VVA I + + + + L D LK + GQD AIE ++EA+K Sbjct: 572 RIDVDPEAIADVVADWTGIAAGKLRRDRANVMLRLADTLKGRIRGQDHAIEQISEAVKAG 631 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLI 534 AG+ +P+G FL AGP+G GKTE + ++ AL + ++ +MSE+ ERH VSRLI Sbjct: 632 AAGVHDPRRPLGVFLLAGPSGTGKTETALAVADALFGDERSIVVVNMSEFQERHDVSRLI 691 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 G+PPGYVG+ +GG+LT+AV + P++V+LLDE+EKAHPDV N+ QV D G+L D G++ Sbjct: 692 GSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAHPDVLNLFYQVFDKGSLCDGEGKEV 751 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQD---NSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 DF N V+ +T+N G + D + + F P R+ I + Sbjct: 752 DFANTVIFLTSNLGADVIADLAARGGRPDPDAMRAAIRPALSRHFKPALLARMTEIP-YA 810 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVS-LEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 L+ D + + + + + ++ + + + + +A + + GAR + ++Q Sbjct: 811 TLAPDTLADIARRKLERIAARVAAQHATRVVYDEAVVAHVAARCTEVESGARSVDFILQR 870 Query: 711 NLKKPLANELL--FGSLVDGGQVTVALDKEKNELTYGFQS 748 ++ LA +L G + +A+D Sbjct: 871 HVLPALAQHVLVCAGDATPMAAIRIAIDA-NGRFVVSTDE 909 >UniRef50_D2QZM9 Type VI secretion ATPase, ClpV1 family n=6 Tax=Bacteria RepID=D2QZM9_9PLAN Length = 915 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 129/454 (28%), Positives = 225/454 (49%), Gaps = 24/454 (5%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 LN ++ A + + ++ + H L +L + + ++ +++ L ++L Sbjct: 13 LNSLAYRAIEAATVFCKMRGNPYVELAHWLHQILQLPDSDVHKIIKQFNLEPSRLARDLT 72 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 +++ P + Q V+ ++V ++V + + Sbjct: 73 ETLDR----FPRGSSSISDLSSHLEDATQQGWVYATLMFKDSQVRTGYLIVGMIKTKTLN 128 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSD----------------PGSQPNSEEQA 163 A L E +++ I + S + Sbjct: 129 NALLSISKEFGKINADTLIDKFAEVVAGSPEDSLRASDGTQVGGGAVPGEASGAMAPAAM 188 Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 G +E ++ F+ +L + AR G IDP++GR++E+ + + +L RRR+NNP+L GE+GVGKTA+ Sbjct: 189 GKQEALKQFSIDLTERARKGEIDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTAV 248 Query: 224 AEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSIL 282 EG A RI GDVP + D ++ SLDIG L AG +G+FE R + ++++++ + IL Sbjct: 249 VEGFALRIASGDVPPSLKDVSLRSLDIGLLQAGASMKGEFENRLRQVIEEVQSSEQPIIL 308 Query: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342 FIDE HT+IGAG A+G DAANL+KP L+ GK+R + +TT+ E+ EKD AL RRFQ Sbjct: 309 FIDEAHTLIGAGGAAG-TGDAANLLKPALARGKLRTVAATTWAEYKKHIEKDPALTRRFQ 367 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI 402 + + EPS ++ + ++ G+ E HH V+ +A+ A+V L+ +YI R LPDK++ ++ Sbjct: 368 VVQVGEPSEDKAILMMRGMASTLEQHHRVQILDEALEASVRLSHRYIPARQLPDKSVSLL 427 Query: 403 DEAGARARLMPVSKRKKTVNVADIESVVARIARI 436 D AR + + + + + I Sbjct: 428 DTTCARVAISQHAVPAEVEDCRRKIEALEVEQGI 461 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 104/359 (28%), Positives = 180/359 (50%), Gaps = 11/359 (3%) Query: 399 IDVIDEAGARARLMPVSKRK--KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL 456 + + E A+ + TV+ + SVVA IP + +++ + + L + L Sbjct: 558 LAKLTELQAKLTALQGESPLILPTVDEQAVASVVADWTGIPVGRMVKNEVEAVLKLAETL 617 Query: 457 KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI-- 514 V GQD A++ + I+ +RA L + +KP+G FL AG +GVGKTE + L++AL Sbjct: 618 GQRVIGQDHAMKMIARRIQTSRAQLENPNKPIGVFLLAGTSGVGKTETALALAEALYGGE 677 Query: 515 -ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV 573 ++ +MSE+ E HTVS L G+PPGYVG+ +GG+LT+AV + P++V+LLDE+EKAH DV Sbjct: 678 QNVITINMSEFQEAHTVSTLKGSPPGYVGYGEGGILTEAVRRKPYSVVLLDEVEKAHGDV 737 Query: 574 FNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG----LIHQDNSTDAM 629 + QV D G + D GR DF+N ++++T+NAG + + Sbjct: 738 HELFFQVFDKGWMEDGEGRVIDFKNTLILLTSNAGSDLIMNMCKDPELLPDPEAIAKSLR 797 Query: 630 EEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD-QKGVSLEVSQEARN 688 + + K+F RL I + LS +I + + ++ ++ V S E Sbjct: 798 DPLLKVFPAALLGRL-VTIPYYPLSDSMIAAITRLQLRRIEKRIGVNHKVPFTYSDEVLK 856 Query: 689 WLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQ 747 + + + G R + ++ + + ++ E+L +V + + + +E Y F Sbjct: 857 LIVSRCTELESGGRMIDSILTNTMLPAISEEILKRMMVGSAVKKIEITAKGSEFHYNFD 915 >UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmodium RepID=B3L4X1_PLAKH Length = 906 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 141/457 (30%), Positives = 232/457 (50%), Gaps = 16/457 (3%) Query: 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIE 63 LN A+ + H + H+L AL + L+ SV+ L+Q L+ +E Sbjct: 39 NRTINILNAGKNIAKRYGHSQLKPVHILSALAKSDYGSNLLKENSVNASNLKQYLDTALE 98 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 QT P + + + + VL A +V ++L + +++ Sbjct: 99 QTRAGPPLDNKSK-IAYSDQVKEVLAEAEALANKYKSQKVDVEHLLSGLMNDEL------ 151 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 +++N + + S ++ G +E F +NLN+ R G Sbjct: 152 -------VNEILNEVYLTDEAVKGILKSKLEKTKKDKDGKSGGLYLEQFGSNLNEKVRNG 204 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 + + GR++E+ I+ L R KN+P+LVG+ G GKT I EGL +RI +GDVP+ + Sbjct: 205 KLQGIYGRDEEIRAVIESLLRYNKNSPVLVGQPGTGKTTIVEGLVYRIEKGDVPKELRGY 264 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-QDTNSILFIDEIHTIIGAGAASGGQVD 302 T+ SL+ +GT YRG+FE R K ++K+L+ + ILF+DEIH ++GAG A GG D Sbjct: 265 TVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKNKIILFVDEIHLLLGAGKAEGGT-D 323 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 AANL+KP+LS G+I++IG+TT E+ E A RRF+KI + PS+E T++I+ LK Sbjct: 324 AANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFERRFEKILVEPPSVENTIKILRSLK 383 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 KYE+ + + T KA+ AA +++ ++I DR+LPDKAID++++A + ++ K + Sbjct: 384 SKYESFYGIHITDKALVAAAKVSDRFIKDRYLPDKAIDLLNKACSFLQVQLSGKPRIIDV 443 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 +A E V + + NL + Sbjct: 444 TEREIERLAYEISTLEMDVDKVSKRKYNNLIKEFENK 480 Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats. Identities = 129/402 (32%), Positives = 205/402 (50%), Gaps = 27/402 (6%) Query: 375 AKAVRAAVELAVKYINDRHLP------------DKAIDVIDEAGARARLM-PVSKRKKTV 421 K + ELA YI+ P +K ++V E A + V Sbjct: 505 EKRLNELKELAQNYISANKEPPIELQNSLKDAQEKYMEVYKETLAYVEAKTHNAMNVDAV 564 Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 + + R + +P S+S L + L + G + I++L++A+ A G+ Sbjct: 565 YQEHVSYIYLRDSGMPLGSLSFESSKGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGM 624 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG---IELLRFDMSEYMERHTVSRLIGAPP 538 KP+G+FLF GPTGVGKTE+ L+ L L+R +MSE+ E H+VS++ G+PP Sbjct: 625 KDPEKPIGTFLFLGPTGVGKTELAKTLAIELFSSKDNLIRVNMSEFTEAHSVSKITGSPP 684 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 GYVGF G LT+AV + PH+V+L DE+EKAHPDVF +LLQ++ +G + DN+ R DF N Sbjct: 685 GYVGFSDSGQLTEAVRERPHSVVLFDELEKAHPDVFKVLLQILGDGYINDNHRRNIDFSN 744 Query: 599 VVLVMTTNAGVRETERK---SIGLIHQDNSTDAMEEI--------KKIFTPEFRNRLDNI 647 +++MT+N G ++K +++ KK+F PEF NR+D I Sbjct: 745 TIIIMTSNLGAELFKKKLFFDANNSDTPEYKRVFDDLRIQLIKKCKKVFKPEFVNRIDKI 804 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 F+ LS + ++V +L+ +L++K + + VS++A +++ ++ YD +GARP Sbjct: 805 GIFEPLSKKNLREIVKLRFKKLEKRLEEKNIHVSVSEKAVDYIIDQSYDPELGARPTLIF 864 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSA 749 I+ + A L LVD V V +K N L + Sbjct: 865 IESVIMTKFAIMYLKKELVDDMDVHVDFNKAANNLVINLTAV 906 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.124 0.294 Lambda K H 0.267 0.0380 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,369,334,653 Number of Sequences: 3077464 Number of extensions: 127126562 Number of successful extensions: 685353 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2574 Number of HSP's successfully gapped in prelim test: 9059 Number of HSP's that attempted gapping in prelim test: 647994 Number of HSP's gapped (non-prelim): 27754 length of query: 758 length of database: 1,040,396,356 effective HSP length: 137 effective length of query: 621 effective length of database: 618,783,788 effective search space: 384264732348 effective search space used: 384264732348 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 97 (42.1 bits)