127 c3dm5A_ Probab=98.00   E-value=0.00031  Score=43.52  Aligned_columns=140  Identities=17%

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH---CCCEEEEEHHHHCCCC-----HHHHHCCC
Q ss_conf             999999999998875203777885699984588742878999999984---8984897703423210-----14654067
Q batch____       465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERH-----TVSRLIGA  536 (758)
Q Consensus       465 ~ai~~i~~~i~~~~~~~~~~~~p~~~~Ll~Gp~G~GKT~lA~~lA~~l---~~~~~~i~~s~~~~~~-----~~~~l~g~  536 (758)
                      .++......+.............+.+++|+||+|+|||+.+--||..+   +.....+.+..|.-..     ......|.
T Consensus        77 ~~v~~eL~~~l~~~~~~~~~~~~p~vI~~vG~~G~GKTTT~aKLA~~~~~~g~kv~li~aDt~R~aA~eQL~~~a~~~~v  156 (416)
T c3dm5A_          77 KIVYEELTKFLGTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHI  156 (416)
T ss_dssp             HHHHHHHHHHTTSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGGTC
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf             99999999861776433334689649999705887734689999999995699189996188670169999999886099


Q ss_pred             CC--CCCCCCCCHHHHHHHH---HCCCCEEEECCCC--CCCHHHHHHHHHHHCCCEEECCCCCEECCCCEEEEECCCCCH
Q ss_conf             77--8332321107899998---2699849952621--059889999999840772314788510135169994257680
Q batch____       537 PP--GYVGFDQGGLLTDAVI---KHPHAVLLLDEIE--KAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGV  609 (758)
Q Consensus       537 ~~--gyvG~~~~~~l~~~v~---~~p~~Vi~lDEie--ka~~~v~~~ll~~l~~g~~~d~~g~~v~~~~~iii~tsn~g~  609 (758)
                      |.  .+.+.+....+.+++.   ...+.+|++|-.-  ..+....+-|-++.+          .+.-..+++++.+..|.
T Consensus       157 p~~~~~~~~d~~~i~~~ai~~~~~~~~DvIlIDTaGR~~~d~~lm~EL~~i~~----------~~~p~~vllV~dA~~gq  226 (416)
T c3dm5A_         157 EVFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISN----------VIHPHEVILVIDGTIGQ  226 (416)
T ss_dssp             EEECCTTCCCHHHHHHHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHH----------HHCCSEEEEEEEGGGGG
T ss_pred             CEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHH----------HCCCCEEEEEECCCCCH
T ss_conf             15854885788999999999999679989998188887998899999999984----------14842199982267878


Q ss_pred             HHHHC
Q ss_conf             12110
Q batch____       610 RETER  614 (758)
Q Consensus       610 ~~~~~  614 (758)
                      .....
T Consensus       227 ~a~~~  231 (416)
T c3dm5A_         227 QAYNQ  231 (416)
T ss_dssp             GHHHH
T ss_pred             HHHHH
T ss_conf             89999