126 c1vmaA_ Probab=98.02   E-value=9.3e-05  Score=46.68  Aligned_columns=117  Identities=16%

Q ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH---CCCEEEEEHH
Q ss_conf             3346577776310022148999999999998875203777885699984588742878999999984---8984897703
Q batch____       446 RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMS  522 (758)
Q Consensus       446 ~~~l~~l~~~l~~~v~gq~~ai~~i~~~i~~~~~~~~~~~~p~~~~Ll~Gp~G~GKT~lA~~lA~~l---~~~~~~i~~s  522 (758)
                      ......+...+...-......+......+.........+..++.+++|+||+|+|||+.+.-||..+   +.+...+++.
T Consensus        50 ~~la~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D  129 (294)
T c1vmaA_          50 VETTEYILERLEEKDGDALESLKEIILEILNFDTKLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAAD  129 (294)
T ss_dssp             HHHHHHHHHHHTTCCSCHHHHHHHHHHHHTCSCCCCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             89999999973413155899999999985043210023578966999980688760248999999999679948999758


Q ss_pred             HHCCCC-----HHHHHCCCCCCCCCCCCCHHHHHHHH-------HCCCCEEEEC
Q ss_conf             423210-----14654067778332321107899998-------2699849952
Q batch____       523 EYMERH-----TVSRLIGAPPGYVGFDQGGLLTDAVI-------KHPHAVLLLD  564 (758)
Q Consensus       523 ~~~~~~-----~~~~l~g~~~gyvG~~~~~~l~~~v~-------~~p~~Vi~lD  564 (758)
                      -|.-..     ...+..|-|  +........+.+.++       ...+.+|++|
T Consensus       130 ~~R~gA~eQL~~~a~~~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~IlID  181 (294)
T c1vmaA_         130 TFRAAAIEQLKIWGERVGAT--VISHSEGADPAAVAFDAVAHALARNKDVVIID  181 (294)
T ss_dssp             TTCHHHHHHHHHHHHHHTCE--EECCSTTCCHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHCCE--EEECCCCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             76864799999999761982--89748836989999999999997799899981