345 c1vciA_ Probab=96.45   E-value=0.021  Score=32.40  Aligned_columns=112  Identities=21%

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHCCC--EEEEEHHHHCCCCHHHHHCCC---------------------------
Q ss_conf             885699984588742878999999984898--489770342321014654067---------------------------
Q batch____       486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE--LLRFDMSEYMERHTVSRLIGA---------------------------  536 (758)
Q Consensus       486 ~p~~~~Ll~Gp~G~GKT~lA~~lA~~l~~~--~~~i~~s~~~~~~~~~~l~g~---------------------------  536 (758)
                      .+-..+.++||+|+|||++.+.|+..+.-.  -+.++.-++.......+.+|.                           
T Consensus        30 ~~Ge~~~l~G~nGsGKsTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  109 (353)
T c1vciA_          30 KDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQHMTVYENIAFPLKKFPKDEIDKRV  109 (353)
T ss_dssp             CTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGGTTEEEECCCCCHHHHHHTTCCCCCHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHCEEECCCCCCEEEECCCCCCHHHHHHHCCHHH
T ss_conf             89978999879998888999999668747600799888887457832302202333200000121121000011000025


Q ss_pred             ----------------CCCCCCCCCCHHHHHHHHHCCCCEEEECC-CCCCCHHHHHHHHHHHCCCEEECCCCCEECCCCE
Q ss_conf             ----------------77833232110789999826998499526-2105988999999984077231478851013516
Q batch____       537 ----------------PPGYVGFDQGGLLTDAVIKHPHAVLLLDE-IEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV  599 (758)
Q Consensus       537 ----------------~~gyvG~~~~~~l~~~v~~~p~~Vi~lDE-ieka~~~v~~~ll~~l~~g~~~d~~g~~v~~~~~  599 (758)
                                      +..+.|-.....-.-..-...+.+++||| .-..++.....+.+.+.         +.....+.
T Consensus       110 ~~~l~~~~~~~~~~~~~~~LSgGq~qrv~iaral~~~p~llllDEP~s~LD~~~~~~~~~~l~---------~~~~~~g~  180 (353)
T c1vciA_         110 RWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIK---------KLQQKLKV  180 (353)
T ss_dssp             HHHHHHTTCGGGTTCCGGGCCSSCHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHH---------HHHHHHCC
T ss_pred             HHHHHHCCCCEEECCCCEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHH---------HHHHHCCC
T ss_conf             787631385101102520357661576888898507865999956101988899999999999---------99997398


Q ss_pred             EEEECCC
Q ss_conf             9994257
Q batch____       600 VLVMTTN  606 (758)
Q Consensus       600 iii~tsn  606 (758)
                      .+|++|.
T Consensus       181 tvi~vtH  187 (353)
T c1vciA_         181 TTIYVTH  187 (353)
T ss_dssp             EEEEEES
T ss_pred             EEEEEEE
T ss_conf             2467730