BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (144 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_O82898 Uncharacterized protein yubF n=84 Tax=root RepID... 293 9e-79 UniRef50_Q4LC27 YceB protein n=2 Tax=Sodalis glossinidius RepID=... 47 1e-04 UniRef50_Q6TFW3 ORF33 n=3 Tax=Enterobacteriaceae RepID=Q6TFW3_ERWAM 40 0.034 UniRef50_O82902 Uncharacterized protein yubJ n=66 Tax=root RepID... 38 0.076 >UniRef50_O82898 Uncharacterized protein yubF n=84 Tax=root RepID=YUBF_ECO57 Length = 144 Score = 293 bits (751), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 144/144 (100%), Positives = 144/144 (100%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE Sbjct: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 Query: 61 DQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDYGLAVPE 120 DQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDYGLAVPE Sbjct: 61 DQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDYGLAVPE 120 Query: 121 CVTRRQAVVNQARILLKNNTHENG 144 CVTRRQAVVNQARILLKNNTHENG Sbjct: 121 CVTRRQAVVNQARILLKNNTHENG 144 >UniRef50_Q4LC27 YceB protein n=2 Tax=Sodalis glossinidius RepID=Q4LC27_SODGL Length = 145 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 6/107 (5%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALAD-GMDISLSDPEIRTVLARLEDIP 59 MYGT + + L Y G PL ++IW + A+AD G D ++D E+ TVL + +P Sbjct: 1 MYGTIKAISERLFHAYGGDEPLAVLIW---DRPAIADIGRDDHVTDEEVLTVLEYIGSLP 57 Query: 60 EDQRIESGISSAAAMEIISNV--SENRQVTVPAELLASLIQTAEQAL 104 ++GI+ E+I R VTV A +L S++ A L Sbjct: 58 ISLYRDAGINREGVEEMIYETIARRRRSVTVDAGMLESVLHLAASVL 104 >UniRef50_Q6TFW3 ORF33 n=3 Tax=Enterobacteriaceae RepID=Q6TFW3_ERWAM Length = 136 Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 4/106 (3%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 M+G +C L + + L+IW+ E++ D++L+D E VLA + + Sbjct: 1 MHGNVNEICARLLDSFEPQQRISLLIWTAEDVHDCTS--DMNLTDDEAEAVLAEIAECSS 58 Query: 61 DQRIESGISS--AAAMEIISNVSENRQVTVPAELLASLIQTAEQAL 104 R G + + A ++ + + +R++ V AE L ++ A Q + Sbjct: 59 HSRYGVGKDTVWSLAKQVREDAARDRKIEVNAEALQKVVALAAQFI 104 >UniRef50_O82902 Uncharacterized protein yubJ n=66 Tax=root RepID=YUBJ_ECO57 Length = 140 Score = 38.1 bits (87), Expect = 0.076, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 5/111 (4%) Query: 1 MYGTCETLCRE-LAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIP 59 MY T + + R+ L P + V+ + +++ +A D +LSD E+ TV+ RL+D Sbjct: 1 MYCTVKEIIRDVLDTDVPDSECVFAVVLTRGDVRHIA--QDWNLSDDELETVMQRLDDAF 58 Query: 60 EDQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWA 110 E + I E++ +RQVTVPA +L ++ A + KR +A Sbjct: 59 E-YGADVSIVHDVVRELMEEKRASRQVTVPAVMLEKVMALAGSEM-KRLYA 107 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_O82898 Uncharacterized protein yubF n=84 Tax=root RepID... 249 2e-65 UniRef50_Q4LC27 YceB protein n=2 Tax=Sodalis glossinidius RepID=... 154 6e-37 Sequences not found previously or not previously below threshold: UniRef50_C8QE82 Putative uncharacterized protein n=1 Tax=Pantoea... 52 5e-06 UniRef50_B5N6G4 Putative cytoplasmic protein n=5 Tax=Salmonella ... 50 2e-05 UniRef50_B5N799 Putative uncharacterized protein n=2 Tax=Salmone... 49 4e-05 UniRef50_O82902 Uncharacterized protein yubJ n=66 Tax=root RepID... 48 8e-05 UniRef50_Q6TFW3 ORF33 n=3 Tax=Enterobacteriaceae RepID=Q6TFW3_ERWAM 46 4e-04 UniRef50_B2U6C4 YcjA n=1 Tax=Escherichia coli 53638 RepID=B2U6C4... 42 0.005 >UniRef50_O82898 Uncharacterized protein yubF n=84 Tax=root RepID=YUBF_ECO57 Length = 144 Score = 249 bits (636), Expect = 2e-65, Method: Composition-based stats. Identities = 144/144 (100%), Positives = 144/144 (100%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE Sbjct: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 Query: 61 DQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDYGLAVPE 120 DQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDYGLAVPE Sbjct: 61 DQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDYGLAVPE 120 Query: 121 CVTRRQAVVNQARILLKNNTHENG 144 CVTRRQAVVNQARILLKNNTHENG Sbjct: 121 CVTRRQAVVNQARILLKNNTHENG 144 >UniRef50_Q4LC27 YceB protein n=2 Tax=Sodalis glossinidius RepID=Q4LC27_SODGL Length = 145 Score = 154 bits (390), Expect = 6e-37, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 6/107 (5%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALAD-GMDISLSDPEIRTVLARLEDIP 59 MYGT + + L Y G PL ++IW + A+AD G D ++D E+ TVL + +P Sbjct: 1 MYGTIKAISERLFHAYGGDEPLAVLIW---DRPAIADIGRDDHVTDEEVLTVLEYIGSLP 57 Query: 60 EDQRIESGISSAAAMEIISNV--SENRQVTVPAELLASLIQTAEQAL 104 ++GI+ E+I R VTV A +L S++ A L Sbjct: 58 ISLYRDAGINREGVEEMIYETIARRRRSVTVDAGMLESVLHLAASVL 104 >UniRef50_C8QE82 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8QE82_9ENTR Length = 129 Score = 52.4 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 8/107 (7%) Query: 2 YGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPED 61 +G +C L Y L +IW+ +++ +GM +D E VLA + E Sbjct: 4 HGNVNEICAWLLRDYGPDMRLTALIWTAQDVHHCTEGM--GTTDDEAEIVLADIAAHRE- 60 Query: 62 QRIESGISSAAAMEIISNVS----ENRQVTVPAELLASLIQTAEQAL 104 ++GI A E++ N R V++PA+ L +L+ +A + L Sbjct: 61 -HHDTGIDRQAVREMVRNWRAEAHRTRMVSLPADSLEALLNSAGRWL 106 >UniRef50_B5N6G4 Putative cytoplasmic protein n=5 Tax=Salmonella enterica RepID=B5N6G4_SALET Length = 144 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 5/107 (4%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 MYGT T+C +L Y + + ++IW +++ + G + + + +I+ VL + + Sbjct: 1 MYGTVSTICCDLLKVYENHEKIAVIIWCEGDVREM--GAEFNPTADDIQAVLRAIGESDS 58 Query: 61 DQRIESGISS---AAAMEIISNVSENRQVTVPAELLASLIQTAEQAL 104 D GI + + + RQ+ VP ++L +L+ E + Sbjct: 59 DALWRDGIGQNFVEGVLRELVALRPPRQIAVPEDVLRTLLPLMEAGM 105 >UniRef50_B5N799 Putative uncharacterized protein n=2 Tax=Salmonella enterica subsp. enterica RepID=B5N799_SALET Length = 137 Score = 48.9 bits (115), Expect = 4e-05, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 MYGT + L +L + L+IW+ +++ +L M ++ E +L + Sbjct: 2 MYGTRKELNSKLKRMFGNDERFALLIWTKQDVMSLTQAM----TEVEADAILREIGRKGM 57 Query: 61 DQRIESGISSAAAMEIISNVS-ENRQVTVPAELLASLIQTAEQAL 104 + GIS + + + + E V+VPA+LLA + A +AL Sbjct: 58 GEHTGDGISDSTVQALYAGLRTEIPTVSVPADLLARVTNIAGRAL 102 >UniRef50_O82902 Uncharacterized protein yubJ n=66 Tax=root RepID=YUBJ_ECO57 Length = 140 Score = 48.2 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 5/111 (4%) Query: 1 MYGTCETLCRE-LAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIP 59 MY T + + R+ L P + V+ + +++ +A D +LSD E+ TV+ RL+D Sbjct: 1 MYCTVKEIIRDVLDTDVPDSECVFAVVLTRGDVRHIA--QDWNLSDDELETVMQRLDD-A 57 Query: 60 EDQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWA 110 + + I E++ +RQVTVPA +L ++ A + KR +A Sbjct: 58 FEYGADVSIVHDVVRELMEEKRASRQVTVPAVMLEKVMALAGSEM-KRLYA 107 >UniRef50_Q6TFW3 ORF33 n=3 Tax=Enterobacteriaceae RepID=Q6TFW3_ERWAM Length = 136 Score = 45.9 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 4/106 (3%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 M+G +C L + + L+IW+ E++ D++L+D E VLA + + Sbjct: 1 MHGNVNEICARLLDSFEPQQRISLLIWTAEDVHDCTS--DMNLTDDEAEAVLAEIAECSS 58 Query: 61 DQRIESGISS--AAAMEIISNVSENRQVTVPAELLASLIQTAEQAL 104 R G + + A ++ + + +R++ V AE L ++ A Q + Sbjct: 59 HSRYGVGKDTVWSLAKQVREDAARDRKIEVNAEALQKVVALAAQFI 104 >UniRef50_B2U6C4 YcjA n=1 Tax=Escherichia coli 53638 RepID=B2U6C4_ECOLX Length = 164 Score = 42.0 bits (97), Expect = 0.005, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 5/108 (4%) Query: 4 TCETLCRE-LAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPEDQ 62 T + + R+ L P + V+ + +++ +A D SL+D E+ TV+ RL+D Sbjct: 28 TVKEIIRDVLDTDVPDSEFVFAVVLTRGDVRHIA--QDWSLTDDELETVMQRLDDAFVYG 85 Query: 63 RIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWA 110 + + S E++ NR VTVPA +L ++ A + KR +A Sbjct: 86 ACDR-VVSDIVNELMEEKRVNRLVTVPAVMLEKVMALAGSEM-KRLYA 131 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_O82898 Uncharacterized protein yubF n=84 Tax=root RepID... 207 7e-53 UniRef50_B5N6G4 Putative cytoplasmic protein n=5 Tax=Salmonella ... 123 2e-27 UniRef50_C8QE82 Putative uncharacterized protein n=1 Tax=Pantoea... 117 9e-26 UniRef50_Q4LC27 YceB protein n=2 Tax=Sodalis glossinidius RepID=... 114 8e-25 UniRef50_Q6TFW3 ORF33 n=3 Tax=Enterobacteriaceae RepID=Q6TFW3_ERWAM 114 1e-24 UniRef50_B5N799 Putative uncharacterized protein n=2 Tax=Salmone... 110 1e-23 UniRef50_O82902 Uncharacterized protein yubJ n=66 Tax=root RepID... 110 1e-23 Sequences not found previously or not previously below threshold: UniRef50_B2U6C4 YcjA n=1 Tax=Escherichia coli 53638 RepID=B2U6C4... 92 5e-18 UniRef50_Q8KJT3 Putative uncharacterized protein orf298 n=1 Tax=... 39 0.037 >UniRef50_O82898 Uncharacterized protein yubF n=84 Tax=root RepID=YUBF_ECO57 Length = 144 Score = 207 bits (527), Expect = 7e-53, Method: Composition-based stats. Identities = 144/144 (100%), Positives = 144/144 (100%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE Sbjct: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 Query: 61 DQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDYGLAVPE 120 DQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDYGLAVPE Sbjct: 61 DQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDYGLAVPE 120 Query: 121 CVTRRQAVVNQARILLKNNTHENG 144 CVTRRQAVVNQARILLKNNTHENG Sbjct: 121 CVTRRQAVVNQARILLKNNTHENG 144 >UniRef50_B5N6G4 Putative cytoplasmic protein n=5 Tax=Salmonella enterica RepID=B5N6G4_SALET Length = 144 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 60/142 (42%), Gaps = 12/142 (8%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 MYGT T+C +L Y + + ++IW +++ + G + + + +I+ VL + + Sbjct: 1 MYGTVSTICCDLLKVYENHEKIAVIIWCEGDVREM--GAEFNPTADDIQAVLRAIGESDS 58 Query: 61 DQRIESGISS---AAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDYGLA 117 D GI + + + RQ+ VP ++L +L+ E + + +D Sbjct: 59 DALWRDGIGQNFVEGVLRELVALRPPRQIAVPEDVLRTLLPLMEAGMNLPRYQTQDRA-- 116 Query: 118 VPECVTRRQAVVNQARILLKNN 139 + ++ R LL N Sbjct: 117 -----AEEETALDTLRYLLSTN 133 >UniRef50_C8QE82 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8QE82_9ENTR Length = 129 Score = 117 bits (294), Expect = 9e-26, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 8/107 (7%) Query: 2 YGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPED 61 +G +C L Y L +IW+ +++ +GM +D E VLA + E Sbjct: 4 HGNVNEICAWLLRDYGPDMRLTALIWTAQDVHHCTEGM--GTTDDEAEIVLADIAAHRE- 60 Query: 62 QRIESGISSAAAMEIISNVS----ENRQVTVPAELLASLIQTAEQAL 104 ++GI A E++ N R V++PA+ L +L+ +A + L Sbjct: 61 -HHDTGIDRQAVREMVRNWRAEAHRTRMVSLPADSLEALLNSAGRWL 106 >UniRef50_Q4LC27 YceB protein n=2 Tax=Sodalis glossinidius RepID=Q4LC27_SODGL Length = 145 Score = 114 bits (285), Expect = 8e-25, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 6/107 (5%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALAD-GMDISLSDPEIRTVLARLEDIP 59 MYGT + + L Y G PL ++IW + A+AD G D ++D E+ TVL + +P Sbjct: 1 MYGTIKAISERLFHAYGGDEPLAVLIW---DRPAIADIGRDDHVTDEEVLTVLEYIGSLP 57 Query: 60 EDQRIESGISSAAAMEIISNV--SENRQVTVPAELLASLIQTAEQAL 104 ++GI+ E+I R VTV A +L S++ A L Sbjct: 58 ISLYRDAGINREGVEEMIYETIARRRRSVTVDAGMLESVLHLAASVL 104 >UniRef50_Q6TFW3 ORF33 n=3 Tax=Enterobacteriaceae RepID=Q6TFW3_ERWAM Length = 136 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 18/137 (13%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 M+G +C L + + L+IW+ E++ D++L+D E VLA + + Sbjct: 1 MHGNVNEICARLLDSFEPQQRISLLIWTAEDVHDCTS--DMNLTDDEAEAVLAEIAECSS 58 Query: 61 DQRIESGISS--AAAMEIISNVSENRQVTVPAELLASLIQTAEQAL-----------WKR 107 R G + + A ++ + + +R++ V AE L ++ A Q + +R Sbjct: 59 HSRYGVGKDTVWSLAKQVREDAARDRKIEVNAEALQKVVALAAQFIRLEEIQSGEGAARR 118 Query: 108 EWAARDYGLAVPECVTR 124 + L EC+T+ Sbjct: 119 LYPQESEAL---ECITK 132 >UniRef50_B5N799 Putative uncharacterized protein n=2 Tax=Salmonella enterica subsp. enterica RepID=B5N799_SALET Length = 137 Score = 110 bits (275), Expect = 1e-23, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPE 60 MYGT + L +L + L+IW+ +++ +L M ++ E +L + Sbjct: 2 MYGTRKELNSKLKRMFGNDERFALLIWTKQDVMSLTQAM----TEVEADAILREIGRKGM 57 Query: 61 DQRIESGISSAAAMEIISNVS-ENRQVTVPAELLASLIQTAEQAL 104 + GIS + + + + E V+VPA+LLA + A +AL Sbjct: 58 GEHTGDGISDSTVQALYAGLRTEIPTVSVPADLLARVTNIAGRAL 102 >UniRef50_O82902 Uncharacterized protein yubJ n=66 Tax=root RepID=YUBJ_ECO57 Length = 140 Score = 110 bits (275), Expect = 1e-23, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 5/111 (4%) Query: 1 MYGTCETLCRE-LAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIP 59 MY T + + R+ L P + V+ + +++ +A D +LSD E+ TV+ RL+D Sbjct: 1 MYCTVKEIIRDVLDTDVPDSECVFAVVLTRGDVRHIAQ--DWNLSDDELETVMQRLDD-A 57 Query: 60 EDQRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWA 110 + + I E++ +RQVTVPA +L ++ A + KR +A Sbjct: 58 FEYGADVSIVHDVVRELMEEKRASRQVTVPAVMLEKVMALAGSEM-KRLYA 107 >UniRef50_B2U6C4 YcjA n=1 Tax=Escherichia coli 53638 RepID=B2U6C4_ECOLX Length = 164 Score = 92.1 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 5/109 (4%) Query: 3 GTCETLCRE-LAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEIRTVLARLEDIPED 61 T + + R+ L P + V+ + +++ +A D SL+D E+ TV+ RL+D Sbjct: 27 CTVKEIIRDVLDTDVPDSEFVFAVVLTRGDVRHIAQ--DWSLTDDELETVMQRLDD-AFV 83 Query: 62 QRIESGISSAAAMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWA 110 + S E++ NR VTVPA +L ++ A + KR +A Sbjct: 84 YGACDRVVSDIVNELMEEKRVNRLVTVPAVMLEKVMALAGSEM-KRLYA 131 >UniRef50_Q8KJT3 Putative uncharacterized protein orf298 n=1 Tax=Proteus vulgaris RepID=Q8KJT3_PROVU Length = 85 Score = 39.3 bits (90), Expect = 0.037, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 6/75 (8%) Query: 1 MYGTCETLCRELAAKYPGYTPLMLVIWSPEEIQALADGMDISLSDPEI--RTVLARLEDI 58 MYGT + + L+ + +IW ++++A + EI + + Sbjct: 1 MYGTVKEIIAHLSQYKNQDEQIGTIIWHSDDVKAAVQDFNNEEISDEIARDALKHAISSH 60 Query: 59 PEDQRIESGISSAAA 73 + GI+ Sbjct: 61 DANY----GITHETL 71 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.128 0.317 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 721,743,510 Number of Sequences: 3077464 Number of extensions: 22121643 Number of successful extensions: 79615 Number of sequences better than 1.0e-01: 9 Number of HSP's better than 0.1 without gapping: 12 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 79579 Number of HSP's gapped (non-prelim): 22 length of query: 144 length of database: 1,040,396,356 effective HSP length: 108 effective length of query: 36 effective length of database: 708,030,244 effective search space: 25489088784 effective search space used: 25489088784 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 87 (38.2 bits)