16/01/2012 05:45:41 : INFO  : Run start: Mon Jan 16 05:45:40 GMT 2012
16/01/2012 05:45:44 : INFO  : Initialised job
16/01/2012 05:45:45 : INFO  : Renaming log file 'phyre2_20120116_054540.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/9910dc17899f5c79/phyre_20120116_054540.log'
16/01/2012 05:45:45 : INFO  : Initialised job:
Sequence
>batch____
MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV
ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA

16/01/2012 05:45:46 : INFO  : Checked sequence
16/01/2012 05:45:48 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 05:45:49 : INFO  : PSI-BLAST 3 iterations
16/01/2012 05:46:41 : INFO  : PSI-BLAST 5 iterations
16/01/2012 05:47:34 : INFO  : Finished PSI-BLAST
16/01/2012 05:47:36 : INFO  : Running Buildali to generate a3m file
16/01/2012 05:51:35 : INFO  : Converting to HMM
16/01/2012 05:51:37 : INFO  : Calibrating HMM
16/01/2012 05:51:45 : INFO  : Searching HMM database
16/01/2012 05:54:27 : INFO  : Finished buildali
16/01/2012 05:54:29 : INFO  : Predicting secondary structure
16/01/2012 05:54:34 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 05:54:36 : INFO  : Predicting Disordered regions
16/01/2012 05:54:39 : INFO  : Predicted Disorder (Disopred)
16/01/2012 05:54:40 : INFO  : Running memsat_svm check
16/01/2012 05:56:19 : INFO  : Globular protein
16/01/2012 05:56:20 : INFO  : Predicted Transmembrane (memsat_svm) ID '9910dc17899f5c79'
16/01/2012 05:56:21 : INFO  : Initialising fold library search
16/01/2012 05:56:24 : INFO  : Initialised search input
16/01/2012 05:56:26 : INFO  : Building Ensemble models
16/01/2012 05:56:29 : INFO  : Building hh.c2kyrA_.model.1.pdb
16/01/2012 05:56:40 : INFO  : Building hh.d2r48a1.model.2.pdb
16/01/2012 05:56:49 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/9910dc17899f5c79/hh.d2r48a1.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/9910dc17899f5c79/d2r48a1.2.pdb
16/01/2012 05:56:52 : INFO  : Building hh.d2r4qa1.model.3.pdb
16/01/2012 05:57:03 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/9910dc17899f5c79/hh.d2r4qa1.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/9910dc17899f5c79/d2r4qa1.3.pdb
16/01/2012 05:57:06 : INFO  : Building c2kyrA_.1.pdb
16/01/2012 05:57:17 : INFO  : Building d2r48a1.2.pdb
16/01/2012 05:57:28 : INFO  : Building d2r4qa1.3.pdb
16/01/2012 05:57:39 : INFO  : Building c1tvmA_.4.pdb
16/01/2012 05:57:50 : INFO  : Building d1iiba_.5.pdb
16/01/2012 05:58:00 : INFO  : Building d2a5la1.6.pdb
16/01/2012 05:58:11 : INFO  : Building d1vkra_.7.pdb
16/01/2012 05:58:23 : INFO  : Building c1vkrA_.8.pdb
16/01/2012 05:58:34 : INFO  : Building c3czcA_.9.pdb
16/01/2012 05:58:44 : INFO  : Building c2l2qA_.10.pdb
16/01/2012 05:58:55 : INFO  : Building c3nbmA_.11.pdb
16/01/2012 05:59:05 : INFO  : Building d1ydga_.12.pdb
16/01/2012 05:59:16 : INFO  : Building d2arka1.13.pdb
16/01/2012 05:59:29 : INFO  : Building d1ycga1.14.pdb
16/01/2012 05:59:40 : INFO  : Building d1qrda_.15.pdb
16/01/2012 05:59:50 : INFO  : Building d1vmea1.16.pdb
16/01/2012 06:00:01 : INFO  : Building c3fniA_.17.pdb
16/01/2012 06:00:12 : INFO  : Building c3p0rA_.18.pdb
16/01/2012 06:00:24 : INFO  : Building c3d7nA_.19.pdb
16/01/2012 06:00:35 : INFO  : Building c2gi4A_.20.pdb
16/01/2012 06:01:21 : INFO  : Finished HH model building
16/01/2012 06:01:23 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 06:02:09 : INFO  : html domain output complete ID '9910dc17899f5c79'
16/01/2012 06:11:35 : INFO  : Run end  : Mon Jan 16 06:11:35 GMT 2012
