Phyre 2 alignment of P17994 with c3izcW_

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Job Description | P17994
Confidence | 4.38% | Date | Thu Jan 5 11:36:28 GMT 2012
Rank | 53 | Aligned Residues | 25
% Identity | 20% | Template | c3izcW_
PDB info | PDB header:ribosome | Chain: W: PDB Molecule:60s ribosomal protein rpl22 (l22e); | PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
Resolution | NULL Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 53 | . | . | . | . | . |  |  | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | D | L | N | E | P | . | . | D | L | F | L | D | S | D | S | L | S | Q | L | P | K | D | L | L | T | I
Query Conservation |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | D | V | S | S | P | T | E | N | G | V | F | D | P | A | S | Y | A | K | Y | L | I | D | H | I | K | V
Template Known Secondary structure |  |  |  |  |  |  | S | S | S |  | S |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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