Phyre 2 alignment of P17994 with c2kaeA_

Return to main results | Retrieve Phyre Job Id

Job Description | P17994
Confidence | 6.25% | Date | Thu Jan 5 11:36:28 GMT 2012
Rank | 27 | Aligned Residues | 16
% Identity | 25% | Template | c2kaeA_
PDB info | PDB header:transcription/dna | Chain: A: PDB Molecule:gata-type transcription factor; | PDBTitle: data-driven model of med1:dna complex
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 310 | . | . | . | . | . | . | . | . | . | 320 |  | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Query Sequence |  | T | P | V | W | N | S | M | P | A | G | A | . | S | F | C | V | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | I | R | W | R | N | I | R | S | K | E | G | I | Q | C | N | A
Template Known Secondary structure |  |  | S | S |  |  |  |  | S | S | S | S |  |  |  | S | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions