Phyre 2 alignment of P17994 with c1kjwA_

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Job Description | P17994
Confidence | 3.42% | Date | Thu Jan 5 11:36:28 GMT 2012
Rank | 83 | Aligned Residues | 32
% Identity | 22% | Template | c1kjwA_
PDB info | PDB header:neuropeptide | Chain: A: PDB Molecule:postsynaptic density protein 95; | PDBTitle: sh3-guanylate kinase module from psd-95
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 275 | . | . | . | . | 280 | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | P | S | F | A | G | V | R | F | E | M | G | N | . | . | . | . | . | . | . | . | . | D | G | W | H | S | F | V | A | L | N | D | E | S | A | S | V | D | A | S | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | L | S | . | Q | A | L | S | F | R | F | G | D | V | L | H | V | I | D | A | G | D | E | E | W | W | Q | A | R | R | V | H | S | D | S | E | T | D | D | I | G | F
Template Known Secondary structure |  |  |  | S | . | S | B |  |  | B |  | T | T |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  | S | S |  |  |  | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 447 | . | . |  | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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