Phyre 2 alignment of P17994 with d2nn6g3

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Job Description | P17994
Confidence | 6.96% | Date | Thu Jan 5 11:36:28 GMT 2012
Rank | 18 | Aligned Residues | 44
% Identity | 27% | Template | d2nn6g3
SCOP info | Eukaryotic type KH-domain (KH-domain type I) | Eukaryotic type KH-domain (KH-domain type I) | Eukaryotic type KH-domain (KH-domain type I)
Resolution | 3.35

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 441 | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | D | Y | F | F | R | V | S | L | A | M | Q | N | K | T | L | L | F | S | L | D | D | T | L | V | N | N | A | L | Q | T | L | N | K | T | R | P | A | M | V | D | V | I | P | T | D | G | I | V | P | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | G | L | L | F | K | V | T | L | G | L | I | R | K | L | L | . | . | A | P | D | C | . | . | . | . | E | I | I | Q | E | V | G | K | L | Y | P | . | L | E | I | V | F | G | M | N | G | R | I | W | V
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  | T | T |  | . | . | . | . | S |  |  |  |  | T | T |  | S | S | S | . |  |  |  |  |  |  | T | T | T |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |  |  | . | . | . | . |  |  |  |  | . | . | . | . | . | 220 | . | . | . | . | . |  | . | . | . | . | 230 | . | . | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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