Phyre 2 alignment of P17994 with d2afja1

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Job Description | P17994
Confidence | 15.12% | Date | Thu Jan 5 11:36:28 GMT 2012
Rank | 4 | Aligned Residues | 77
% Identity | 21% | Template | d2afja1
SCOP info | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | SPRY domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 415 | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . |  |  | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | I | W | R | R | E | V | S | S | R | Y | G | Q | Y | P | K | A | Q | A | A | Q | P | D | Q | L | M | S | D | Y | F | F | R | V | S | L | A | M | Q | N | K | T | L | L | F | S | L | D | D | T | L | V | N | N | A | L | Q | T | L | . | . | N | K | T | R | P | A | M | V | D | V | I | P | T | D | G | I | V | P | L | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | L | Y | H | Q | S | K | G | L | E | A | P | Q | Y | P | A | G | P | Q | G | E | Q | L | . | . | V | V | P | E | R | L | L | V | V | L | D | M | E | E | G | T | L | G | Y | S | I | G | G | T | Y | L | G | P | A | F | R | G | L | K | G | R | T | L | Y | P | S | V | S | A | V | W | G | Q | C | Q | V | R | I | R | Y
Template Known Secondary structure |  | S | T | T | S | S | S | S |  |  | S |  | S | S | S | S |  |  | S | G | G | G | G | S | . | . |  |  | S | S |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  | S | T | T |  | S |  | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |  |  | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | .
|  | 493
Predicted Secondary structure |  |
Query SS confidence |  |
Query Sequence |  | I
Query Conservation |  |
Alig confidence |  |
Template Conservation |  |
Template Sequence |  | M
Template Known Secondary structure |  |
Template Predicted Secondary structure |  |
Template SS confidence |  |
|  | 217

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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