Phyre 2 alignment of P17994 with d2g7ja1

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Job Description | P17994
Confidence | 4.27% | Date | Thu Jan 5 11:36:28 GMT 2012
Rank | 56 | Aligned Residues | 30
% Identity | 47% | Template | d2g7ja1
SCOP info | Secretion chaperone-like | YgaC/TfoX-N like | YgaC-like
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | Q | N | H | A | D | R | L | G | I | E | G | S | I | R | R | I | V | Y | E | H | D | L | T | L | K | D | K | L | F | S | S | L | L | D | Q | P | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template Sequence |  | Y | V | N | R | E | A | R | M | G | . | . | . | . | . | . | R | T | A | L | I | I | H | P | R | L | K | D | R | . | . | S | S | S | L | A | D | P | A
Template Known Secondary structure |  |  |  |  | T | T |  | S | S | T | . | . | . | . | . | . | T | S |  |  |  |  |  | S | S |  |  |  |  | . | . |  |  |  |  | S |  | B | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 37 | . | . | 40 | . | . | . | . | . |  |  |  |  |  |  | . | . | . | . | 50 | . | . | . | . | . | . | . | . |  |  | . | 60 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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