Phyre 2 Results for P17994

Email | l.a.kelley@imperial.ac.uk
Description | P17994
Date | Thu Jan 5 11:36:28 GMT 2012
Unique Job ID | 98fca65dd928d930

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1b24a1 |
|  | 26.8 | 45 | Fold:Homing endonuclease-like Superfamily:Homing endonucleases Family:Group I mobile intron endonuclease
2 | d2piaa3 |
|  | 26.3 | 11 | Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins
3 | d1cwea_ |
|  | 22.8 | 30 | Fold:SH2-like Superfamily:SH2 domain Family:SH2 domain
4 | d2afja1 |
|  | 15.1 | 21 | Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:SPRY domain
5 | c2z4dA_ |
|  | 14.4 | 13 | PDB header:nuclear protein Chain: A: PDB Molecule:26s proteasome regulatory subunit rpn13; PDBTitle: nmr structures of yeast proteasome component rpn13
6 | c3ts3D_ |
|  | 10.1 | 13 | PDB header:viral protein Chain: D: PDB Molecule:capsid polyprotein; PDBTitle: crystal structure of the projection domain of the turkey astrovirus2 capsid protein at 1.5 angstrom resolution
7 | c3uatA_ |
|  | 9.8 | 28 | PDB header:peptide binding protein Chain: A: PDB Molecule:disks large homolog 1; PDBTitle: guanylate kinase domains of the maguk family scaffold proteins as2 specific phospho-protein binding modules
8 | c2w9vA_ |
|  | 9.3 | 38 | PDB header:toxin Chain: A: PDB Molecule:short disintegrin jerdostatin; PDBTitle: solution structure of jerdostatin from trimeresurus2 jerdonii with end c-terminal residues n45g46 deleted
9 | c2i46A_ |
|  | 8.9 | 11 | PDB header:protein binding Chain: A: PDB Molecule:adrenocortical dysplasia protein homolog; PDBTitle: crystal structure of human tpp1
10 | d1eg3a2 |
|  | 8.6 | 26 | Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins
11 | d1rkua_ |
|  | 8.5 | 13 | Fold:HAD-like Superfamily:HAD-like Family:Homoserine kinase ThrH
12 | d2b6ca1 |
|  | 7.9 | 26 | Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:BC3264-like
13 | d1y0ja1 |
|  | 7.3 | 38 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Erythroid transcription factor GATA-1
14 | c2p11A_ |
|  | 7.2 | 38 | PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative haloacid dehalogenase-like hydrolase2 (bxe_b1342) from burkholderia xenovorans lb400 at 2.20 a resolution
15 | c3u7zA_ |
|  | 7.1 | 11 | PDB header:metal binding protein Chain: A: PDB Molecule:putative metal binding protein rumgna_00854; PDBTitle: crystal structure of a putative metal binding protein rumgna_008542 (zp_02040092.1) from ruminococcus gnavus atcc 29149 at 1.30 a3 resolution
16 | d1a3qa1 |
|  | 7.1 | 19 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
17 | d2f69a1 |
|  | 7.1 | 60 | Fold:open-sided beta-meander Superfamily:Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Family:Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
18 | d2nn6g3 |
|  | 7.0 | 27 | Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I)
19 | c3m9bK_ |
|  | 6.9 | 10 | PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa
20 | c1q90R_ |
|  | 6.9 | 33 | PDB header:photosynthesis Chain: R: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit; PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii
21 | d1q90r_ |
| not modelled | 6.9 | 33 | Fold:Single transmembrane helix Superfamily:ISP transmembrane anchor Family:ISP transmembrane anchor
22 | c3pgeA_ |
| not modelled | 6.9 | 12 | PDB header:dna binding protein Chain: A: PDB Molecule:sumo-modified proliferating cell nuclear antigen; PDBTitle: structure of sumoylated pcna
23 | d2uubc1 |
| not modelled | 6.9 | 31 | Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II)
24 | d1twfc1 |
| not modelled | 6.9 | 29 | Fold:DCoH-like Superfamily:RBP11-like subunits of RNA polymerase Family:RNA polymerase alpha subunit dimerisation domain
25 | d1whya_ |
| not modelled | 6.8 | 22 | Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD
26 | d1ji8a_ |
| not modelled | 6.8 | 26 | Fold:DsrC, the gamma subunit of dissimilatory sulfite reductase Superfamily:DsrC, the gamma subunit of dissimilatory sulfite reductase Family:DsrC, the gamma subunit of dissimilatory sulfite reductase
27 | c2kaeA_ |
| not modelled | 6.3 | 25 | PDB header:transcription/dna Chain: A: PDB Molecule:gata-type transcription factor; PDBTitle: data-driven model of med1:dna complex
28 | c2l25A_ |
| not modelled | 5.9 | 17 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: np_888769.1
29 | c1a3qA_ |
| not modelled | 5.7 | 19 | PDB header:transcription/dna Chain: A: PDB Molecule:protein (nuclear factor kappa-b p52); PDBTitle: human nf-kappa-b p52 bound to dna
30 | c3s2xB_ |
| not modelled | 5.7 | 37 | PDB header:transferase Chain: B: PDB Molecule:acetyl-coa synthase subunit alpha; PDBTitle: structure of acetyl-coenzyme a synthase alpha subunit c-terminal2 domain
31 | d2fug31 |
| not modelled | 5.4 | 16 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
32 | c2l1qA_ |
| not modelled | 5.4 | 58 | PDB header:antimicrobial protein Chain: A: PDB Molecule:liver-expressed antimicrobial peptide 2; PDBTitle: solution structure of human liver expressed antimicrobial peptide 2
33 | d2vuti1 |
| not modelled | 5.3 | 43 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Erythroid transcription factor GATA-1
34 | d2ieca1 |
| not modelled | 5.3 | 24 | Fold:MK0786-like Superfamily:MK0786-like Family:MK0786-like
35 | d1gjwa1 |
| not modelled | 5.2 | 28 | Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain
36 | d1f2fa_ |
| not modelled | 5.2 | 50 | Fold:SH2-like Superfamily:SH2 domain Family:SH2 domain
37 | c2kvoA_ |
| not modelled | 5.0 | 17 | PDB header:photosynthesis Chain: A: PDB Molecule:photosystem ii reaction center psb28 protein; PDBTitle: solution nmr structure of photosystem ii reaction center psb28 protein2 from synechocystis sp.(strain pcc 6803), northeast structural3 genomics consortium target sgr171
38 | c2de4B_ |
| not modelled | 5.0 | 20 | PDB header:hydrolase Chain: B: PDB Molecule:dibenzothiophene desulfurization enzyme b; PDBTitle: crystal structure of dszb c27s mutant in complex with biphenyl-2-2 sulfinic acid