Phyre 2 alignment of P0CF30 with c3udiA_

Return to main results | Retrieve Phyre Job Id

Job Description | P0CF30
Confidence | 3.61% | Date | Thu Jan 5 11:30:52 GMT 2012
Rank | 70 | Aligned Residues | 17
% Identity | 24% | Template | c3udiA_
PDB info | PDB header:penicillin-binding protein/antibiotic | Chain: A: PDB Molecule:penicillin-binding protein 1a; | PDBTitle: crystal structure of acinetobacter baumannii pbp1a in complex with2 penicillin g
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | A | Y | D | S | L | R | K | T | V | V | A | H | V | F | G | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | A | I | N | P | N | D | G | S | I | E | A | I | V | G | G | Y
Template Known Secondary structure |  |  |  |  |  | T | T | T |  | B |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 399 | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions