Phyre 2 alignment of P0CF30 with c2jciA_

Return to main results | Retrieve Phyre Job Id

Job Description | P0CF30
Confidence | 4.13% | Date | Thu Jan 5 11:30:52 GMT 2012
Rank | 59 | Aligned Residues | 17
% Identity | 18% | Template | c2jciA_
PDB info | PDB header:drug-binding protein | Chain: A: PDB Molecule:penicillin-binding protein 1b; | PDBTitle: structural insights into the catalytic mechanism and the2 role of streptococcus pneumoniae pbp1b
Resolution | 2.5 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | A | Y | D | S | L | R | K | T | V | V | A | H | V | F | G | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | L | M | D | N | Q | T | G | A | I | L | G | F | V | G | G | R
Template Known Secondary structure |  |  |  |  |  | T | T | T |  | B |  |  |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 425 | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions