Phyre 2 alignment of P0CF30 with c2be1A_

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Job Description | P0CF30
Confidence | 3.14% | Date | Thu Jan 5 11:30:52 GMT 2012
Rank | 80 | Aligned Residues | 27
% Identity | 22% | Template | c2be1A_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; | PDBTitle: structure of the compact lumenal domain of yeast ire1
Resolution | 2.98 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | Y | V | G | A | K | S | R | Q | R | W | L | F | Y | A | Y | D | S | L | R | K | T | V | V | A | H | V | F | G | E | R | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | Y | T | G | S | M | R | T | . | . | . | I | M | Y | T | I | N | M | L | N | G | E | I | I | . | S | A | F | G | P | G | S
Template Known Secondary structure |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  | T | T | T |  |  |  |  | . |  |  |  | S | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 225 | . | . | . | . | 230 | . |  |  |  | . | . | . | . | . | . | . | . | 240 | . | . | . | . |  | . | . | . | . | . | 250 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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